BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018463
(355 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255559072|ref|XP_002520558.1| brg-1 associated factor, putative [Ricinus communis]
gi|223540218|gb|EEF41791.1| brg-1 associated factor, putative [Ricinus communis]
Length = 397
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 269/400 (67%), Positives = 297/400 (74%), Gaps = 55/400 (13%)
Query: 1 MVSDQEIAKGVETLLRQSDRNASTSLNGVVKQLEAKLGLDLSHKAGFIRDQISLLLRSHP 60
MVSDQ+IAKGVET+LRQSD NA TSL+GVV+QLEAKLGLDLSHKAGFIRDQISLLLRSHP
Sbjct: 8 MVSDQDIAKGVETVLRQSDPNAVTSLDGVVQQLEAKLGLDLSHKAGFIRDQISLLLRSHP 67
Query: 61 TPQQVATNTQPQPQPQPQ-------------------QLPPKDHFTLQHHPQFSLPPQQF 101
T AT+T L KDHF LQHHPQF QQF
Sbjct: 68 TTVTTATSTSSSAVTHQPAPPPLQQQQQQPHLHPQNLHLSQKDHFALQHHPQF----QQF 123
Query: 102 PPHFALHHPHPHLPQ-----FPQELNFSQPQPSQAAAPPPQPHSNV-------------- 142
P HFAL+ HPH FPQ+LNF QPQ P Q H++V
Sbjct: 124 PAHFALNPHHPHHHHHHHQVFPQDLNFRQPQV------PAQTHASVPPQQHQQQRQQPPP 177
Query: 143 -SKAEAFPQ----ISAEVAKENPPVGAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEI 197
+K E F Q + +E+ KE+ PVGAKRRGGPGGLNKVCGVSPELQA+VG+PA+PRTEI
Sbjct: 178 IAKNEVFSQNATPVPSELPKESAPVGAKRRGGPGGLNKVCGVSPELQAIVGEPALPRTEI 237
Query: 198 VKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEPTKES- 256
VKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEPTKES
Sbjct: 238 VKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEPTKESA 297
Query: 257 -SKRFKPDAESTTEGMESGPSSVIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLED 315
+KR K D ESTTE E G S ++ISEALAKFLGTGGREM Q EA++RVWEYIKVN LED
Sbjct: 298 QAKRAKVDVESTTENAEPGASVIVISEALAKFLGTGGREMTQLEASRRVWEYIKVNRLED 357
Query: 316 PLNSMVILCDAKLRELLGCESISALGIQEMLARNHFLRQS 355
PLNSMVILCDAKLRELLGCESISA+G++EMLAR+H ++S
Sbjct: 358 PLNSMVILCDAKLRELLGCESISAVGVEEMLARHHLFKRS 397
>gi|359495550|ref|XP_003635018.1| PREDICTED: uncharacterized protein LOC100853436 [Vitis vinifera]
gi|297741808|emb|CBI33113.3| unnamed protein product [Vitis vinifera]
Length = 344
Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust.
Identities = 250/365 (68%), Positives = 272/365 (74%), Gaps = 31/365 (8%)
Query: 1 MVSDQEIAKGVETLLRQSDRNASTSLNGVVKQLEAKLGLDLSHKAGFIRDQISLLLRSHP 60
MVSDQ+IAKGVETLLRQS+ N+ TSLNGVVKQLEAKLGLDLSHKA FIRDQIS LLRSHP
Sbjct: 1 MVSDQDIAKGVETLLRQSEPNSFTSLNGVVKQLEAKLGLDLSHKAVFIRDQISFLLRSHP 60
Query: 61 TPQQVATNTQPQPQPQPQQLPPKDHFTLQHHPQFSLPPQQFPPHFALHHPHPHLPQFPQE 120
P LPPKDHF LQ HPQF P Q P HFAL H P P++
Sbjct: 61 QP-----------------LPPKDHFALQQHPQFLSPHPQIPSHFALQHHRPP----PED 99
Query: 121 LNFSQP----QPSQAAAPPPQPHSNVSKAEAFPQISAEVA----KENPPVGAKRRGGPGG 172
LNF P Q Q P ++ K EAF Q +A VA KE+ P KRRGG GG
Sbjct: 100 LNFLYPLPQPQQHQPQTQPQPQPHHLPKGEAFLQNAASVAAQAPKESAPAAPKRRGGSGG 159
Query: 173 LNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETD 232
LNKVCGVS ELQAVVG+P MPRT+IVKQLWAYIRKNNLQDPSNKRKIICDDALR+VFETD
Sbjct: 160 LNKVCGVSTELQAVVGEPTMPRTQIVKQLWAYIRKNNLQDPSNKRKIICDDALRLVFETD 219
Query: 233 CTDMFKMNKLLAKHIIPLEPTKESS--KRFKPDAESTTEGMESGPSSVIISEALAKFLGT 290
TDMFKMNKLLAKHIIPLEP++ESS KR K D ES TE E+ PS V+IS+ALA F GT
Sbjct: 220 STDMFKMNKLLAKHIIPLEPSRESSQAKRLKVDVESATESSEASPSPVMISDALATFFGT 279
Query: 291 GGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNH 350
G REMLQ EA +RVWEYIKVN LEDPLNSM ILCDAKLREL GCESISALG+ EMLAR+H
Sbjct: 280 GEREMLQEEALRRVWEYIKVNQLEDPLNSMAILCDAKLRELFGCESISALGVSEMLARHH 339
Query: 351 FLRQS 355
++S
Sbjct: 340 LFKRS 344
>gi|225469998|ref|XP_002278125.1| PREDICTED: uncharacterized protein LOC100267408 [Vitis vinifera]
gi|297741803|emb|CBI33108.3| unnamed protein product [Vitis vinifera]
Length = 347
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 248/368 (67%), Positives = 273/368 (74%), Gaps = 34/368 (9%)
Query: 1 MVSDQEIAKGVETLLRQSDRNASTSLNGVVKQLEAKLGLDLSHKAGFIRDQISLLLRSHP 60
MVSDQ+IAKGVETLLRQS+ N+ TSLNG+VKQLEAKLGLDLSHKA FIRDQIS LLRSHP
Sbjct: 1 MVSDQDIAKGVETLLRQSEPNSFTSLNGIVKQLEAKLGLDLSHKAVFIRDQISFLLRSHP 60
Query: 61 TPQQVATNTQPQPQPQPQQLPPKDHFTLQHHPQFSLPPQQFPPHFALHHPHPHLPQFPQE 120
P LPPKDHF LQ HPQF P Q P HFAL H P P++
Sbjct: 61 QP-----------------LPPKDHFALQQHPQFLSPHPQIPSHFALQHHRPP----PED 99
Query: 121 LNFSQP-------QPSQAAAPPPQPHSNVSKAEAFPQISAEVA----KENPPVGAKRRGG 169
LNF P +Q P ++ K EAF Q +A VA KE+ P AKRRGG
Sbjct: 100 LNFLYPLPQPQPQTQTQPQPQPQTQPHHLPKGEAFLQNAASVAAQAPKESAPAAAKRRGG 159
Query: 170 PGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF 229
GGLNKVCGVS ELQAVVG+P MPRT+IVKQLWAYIRKNNLQDPSNKRKIICDDALR+VF
Sbjct: 160 SGGLNKVCGVSTELQAVVGEPTMPRTQIVKQLWAYIRKNNLQDPSNKRKIICDDALRLVF 219
Query: 230 ETDCTDMFKMNKLLAKHIIPLEPTKESS--KRFKPDAESTTEGMESGPSSVIISEALAKF 287
ETD TDMFKMNKLLAKHIIPLEP++ESS KR K D ES TE E+ PS V+IS+ALA F
Sbjct: 220 ETDSTDMFKMNKLLAKHIIPLEPSRESSQAKRLKVDVESATESSEASPSPVMISDALATF 279
Query: 288 LGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLA 347
GTG REMLQ EA +RVWEYIKVN LEDPLNSM ILCDAKL+EL GCESISALG+ EMLA
Sbjct: 280 FGTGEREMLQEEALRRVWEYIKVNQLEDPLNSMAILCDAKLQELFGCESISALGVSEMLA 339
Query: 348 RNHFLRQS 355
R+H ++S
Sbjct: 340 RHHLFKRS 347
>gi|147816096|emb|CAN72895.1| hypothetical protein VITISV_022315 [Vitis vinifera]
Length = 339
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 246/365 (67%), Positives = 268/365 (73%), Gaps = 36/365 (9%)
Query: 1 MVSDQEIAKGVETLLRQSDRNASTSLNGVVKQLEAKLGLDLSHKAGFIRDQISLLLRSHP 60
MVSDQ+IAKGVETLLRQS+ N+ TSLNGVVKQLEAKLGLDLSHKA FIRDQIS LLRSHP
Sbjct: 1 MVSDQDIAKGVETLLRQSEPNSFTSLNGVVKQLEAKLGLDLSHKAXFIRDQISFLLRSHP 60
Query: 61 TPQQVATNTQPQPQPQPQQLPPKDHFTLQHHPQFSLPPQQFPPHFALHHPHPHLPQFPQE 120
P LPPKDHF LQ HPQF P Q P HFAL H P P++
Sbjct: 61 QP-----------------LPPKDHFALQQHPQFLSPHPQIPSHFALQHHRPP----PED 99
Query: 121 LNFSQP----QPSQAAAPPPQPHSNVSKAEAFPQISAEVA----KENPPVGAKRRGGPGG 172
LNF P Q Q P ++ K EAF Q +A VA KE+ P KRRGG GG
Sbjct: 100 LNFLYPLPQPQQHQPQTQPQPQPHHLPKGEAFLQNAASVAAQAPKESAPAAXKRRGGSGG 159
Query: 173 LNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETD 232
LNKVCGVS ELQAVVG+P MPRT+IVKQLWAYIRKNNLQDPSNKRKIICDDALR+VFETD
Sbjct: 160 LNKVCGVSTELQAVVGEPTMPRTQIVKQLWAYIRKNNLQDPSNKRKIICDDALRLVFETD 219
Query: 233 CTDMFKMNKLLAKHIIPLEPTKESS--KRFKPDAESTTEGMESGPSSVIISEALAKFLGT 290
TDMFKMNKLLAKHIIPLEP++ESS KR K D ES TE E+ PS V+IS+ALA F GT
Sbjct: 220 STDMFKMNKLLAKHIIPLEPSRESSQAKRLKVDVESATESSEASPSPVMISDALATFFGT 279
Query: 291 GGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNH 350
G REMLQ EA +RVWEYIK DPLNSM ILCDAKLREL GCESISALG+ EMLAR+H
Sbjct: 280 GEREMLQEEALRRVWEYIK-----DPLNSMAILCDAKLRELFGCESISALGVSEMLARHH 334
Query: 351 FLRQS 355
++S
Sbjct: 335 LFKRS 339
>gi|356562640|ref|XP_003549577.1| PREDICTED: uncharacterized protein LOC100804281 [Glycine max]
Length = 329
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 238/360 (66%), Positives = 266/360 (73%), Gaps = 39/360 (10%)
Query: 1 MVSDQEIAKGVETLLRQSDRNASTSLNGVVKQLEAKLGLDLSHKAGFIRDQISLLLRSHP 60
MV+DQ+IAKGVE+LLR SD N+ T++NGVV+QLEAKLGLDLSHKA FIRDQI LLRS P
Sbjct: 1 MVTDQDIAKGVESLLRHSDPNSITTVNGVVQQLEAKLGLDLSHKASFIRDQIDHLLRSQP 60
Query: 61 TPQQVATNTQPQPQPQPQQLPPKDHFTLQHHPQFSLPPQQFPPHFALHHPHPHLPQFPQE 120
Q A P P P KD+F H Q P F PHFALH E
Sbjct: 61 --QTFA------PHPPPLH---KDYFA--PHTQLHFPTTHFAPHFALH----------DE 97
Query: 121 LNFSQ-PQPSQAAAPPPQPHSNVSKAEAFPQISA---EVAKENPPVGAKRRGGPGGLNKV 176
+NF Q P P PPP+ K E FP + +V KE+ G+KRRGG GGLNKV
Sbjct: 98 INFLQHPHP-----PPPR------KVETFPPQNVAPPQVPKESVQTGSKRRGGAGGLNKV 146
Query: 177 CGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDM 236
CGVSPELQAVVG+PAMPRTEIV+QLWAYI+KNNLQDP NKRKIICDDALR+VFETDCTDM
Sbjct: 147 CGVSPELQAVVGEPAMPRTEIVRQLWAYIKKNNLQDPGNKRKIICDDALRLVFETDCTDM 206
Query: 237 FKMNKLLAKHIIPLEPTKES-SKRFKPDAESTTEGMESGPSSVIISEALAKFLGTGGREM 295
FKMN+LLAKHIIPL PTKES +KR K D E TE E PS+V ISEALAKFLGT GREM
Sbjct: 207 FKMNQLLAKHIIPLGPTKESQAKRVKVDTEIKTESAEPAPSTVAISEALAKFLGTEGREM 266
Query: 296 LQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNHFLRQS 355
Q+EA + VWEYIK++HLEDPLNSMVILCDAKL+ELLGCESISALGI EMLAR+H +QS
Sbjct: 267 QQSEAIRLVWEYIKLHHLEDPLNSMVILCDAKLQELLGCESISALGIPEMLARHHLFKQS 326
>gi|118485716|gb|ABK94708.1| unknown [Populus trichocarpa]
Length = 385
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 243/391 (62%), Positives = 272/391 (69%), Gaps = 42/391 (10%)
Query: 1 MVSDQEIAKGVETLLRQSDRNASTSLNGVVKQLEAKLGLDLSHKAGFIRDQISLLLRSHP 60
MV+DQEIAKGVET+LRQ+D +A TSLNGVV+QLEAKLGLDLSHKA FIRDQI LLLRSHP
Sbjct: 1 MVTDQEIAKGVETVLRQADPSAVTSLNGVVQQLEAKLGLDLSHKAAFIRDQIDLLLRSHP 60
Query: 61 TPQQ--------VATNTQPQPQPQPQ--------QLPPKDHFTLQHHPQFSLPPQQFPPH 104
V T P PQ Q L PKDHF LQ QF P H
Sbjct: 61 ITTTASATAPASVTTTGHPPPQHQAFQFQQGQALNLTPKDHFALQFQQQF------HPSH 114
Query: 105 FALHHPHPHLPQ-----------FPQELNFSQPQPSQAAAPPPQPHSNVSKAEAFPQ--- 150
FA+H H H Q F Q+LNF QPQ PP +
Sbjct: 115 FAIHPHHQHQHQHHPQQHHQHQVFSQDLNFRQPQAVVTPPAPPPQLQAQQQHRQTQHVQN 174
Query: 151 ---ISAEVAKEN-PPVGAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIR 206
++ EVAKE+ PVG+KRRGGPGGLNKVCGVSPELQA+VG+PA+PRTEIVKQLW YIR
Sbjct: 175 AGVVTNEVAKESSAPVGSKRRGGPGGLNKVCGVSPELQAIVGEPALPRTEIVKQLWQYIR 234
Query: 207 KNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEPTKESS--KRFKPDA 264
KNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHIIPL+P+KESS KR K D
Sbjct: 235 KNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLQPSKESSQAKRAKVDV 294
Query: 265 ESTTEGMESGPSSVIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILC 324
E+ TE E G S V ISE LA+FLGT REM Q EA++RVWEYIK+ LEDPLNSM I C
Sbjct: 295 ETPTENTEPGASLVGISERLAEFLGTTEREMTQTEASRRVWEYIKLKQLEDPLNSMAIQC 354
Query: 325 DAKLRELLGCESISALGIQEMLARNHFLRQS 355
D KLR+LLGCESISA+G+ E+LAR+H ++S
Sbjct: 355 DTKLRDLLGCESISAVGVGEVLARHHLFKRS 385
>gi|224086383|ref|XP_002307875.1| predicted protein [Populus trichocarpa]
gi|222853851|gb|EEE91398.1| predicted protein [Populus trichocarpa]
Length = 421
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 238/387 (61%), Positives = 263/387 (67%), Gaps = 49/387 (12%)
Query: 1 MVSDQEIAKGVETLLRQSDRNASTSLNGVVKQLEAKLGLDLSHKAGFIRDQISLLLRSHP 60
MV+DQEIAKGVET+LRQ+D +A TSLNGVV+QLEAKLGLDLSHKA FIRDQI LLLRSHP
Sbjct: 1 MVTDQEIAKGVETVLRQADPSAVTSLNGVVQQLEAKLGLDLSHKAAFIRDQIDLLLRSHP 60
Query: 61 TPQQ--------VATNTQPQPQPQPQ--------QLPPKDHFTLQHHPQFSLPPQQFPPH 104
V T P PQ Q L PKDHF LQ QF P H
Sbjct: 61 ITTTASATAPASVTTTGHPPPQHQAFQFQQGQALNLTPKDHFALQFQQQFH------PSH 114
Query: 105 FALHHPHPHLPQ-----------FPQELNFSQPQPSQAAAPPPQPHSNVSKAEAFPQ--- 150
FA+H H H Q F Q+LNF QPQ PP +
Sbjct: 115 FAIHPHHQHQHQHHPQQHHQHQVFSQDLNFRQPQAVVTPPAPPPQLQAQQQHRQTQHVQN 174
Query: 151 ---ISAEVAKEN-PPVGAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIR 206
++ EVAKE+ PVG+KRRGGPGGLNKVCGVSPELQA+VG+PA+PRTEIVKQLW YIR
Sbjct: 175 AGVVTNEVAKESSAPVGSKRRGGPGGLNKVCGVSPELQAIVGEPALPRTEIVKQLWQYIR 234
Query: 207 KNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEPT-------KESS-- 257
KNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHIIPL+P+ KESS
Sbjct: 235 KNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLQPSSMFYDNYKESSQA 294
Query: 258 KRFKPDAESTTEGMESGPSSVIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPL 317
KR K D E+ TE E G S V ISE LA+FLGT REM Q EA++RVWEYIK+ LEDPL
Sbjct: 295 KRAKVDVETPTENTEPGASLVGISERLAEFLGTTEREMTQTEASRRVWEYIKLKQLEDPL 354
Query: 318 NSMVILCDAKLRELLGCESISALGIQE 344
NSM I CD KLR+LLGCESISA+G+ E
Sbjct: 355 NSMAIQCDTKLRDLLGCESISAVGVGE 381
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 32/53 (60%)
Query: 297 QAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARN 349
+ E K++W+YI+ N+L+DP N I+CD LR + + + ++LA++
Sbjct: 222 RTEIVKQLWQYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKH 274
>gi|356522045|ref|XP_003529660.1| PREDICTED: uncharacterized protein LOC100788173 [Glycine max]
Length = 332
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 239/365 (65%), Positives = 266/365 (72%), Gaps = 46/365 (12%)
Query: 1 MVSDQEIAKGVETLLRQSDRNASTSLNGVVKQLEAKLGLDLSHKAGFIRDQISLLLRSHP 60
MV+DQ+IAKGVE+LLR SD N+ T++NGVV+QLEAKLGLDLSHKA FIRDQI LLRS
Sbjct: 1 MVTDQDIAKGVESLLRHSDPNSITTVNGVVQQLEAKLGLDLSHKASFIRDQIDHLLRS-- 58
Query: 61 TPQQVATNTQPQ---PQPQPQQLPPKDHFTLQHHPQFSLPPQQFPPHFALHHPHPHLPQF 117
QPQ P P P KD+F HPQ P FP HFALH
Sbjct: 59 ---------QPQAFVPHPPPLH---KDYFA--PHPQPHFPTTHFPSHFALH--------- 95
Query: 118 PQELNFSQPQPSQAAAPPPQPHSNVSKAEAFPQISA------EVAKENPPVGAKRRGGPG 171
E+NF Q APPP K E FP +A +V KE+ GAKRRGG G
Sbjct: 96 -DEINFQQ----HPRAPPP------CKVETFPPQNAHTVAPPQVPKESVQTGAKRRGGAG 144
Query: 172 GLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFET 231
GLNKVCGVSPELQAVVG+PAMPRTEIV+QLWAYI+KNNLQDP NKRKIICDDALR+VFET
Sbjct: 145 GLNKVCGVSPELQAVVGEPAMPRTEIVRQLWAYIKKNNLQDPGNKRKIICDDALRLVFET 204
Query: 232 DCTDMFKMNKLLAKHIIPLEPTKES-SKRFKPDAESTTEGMESGPSSVIISEALAKFLGT 290
DCTDMFKMN+LLAKHIIPL PTKES +KR K DAE E E S+V+ISEALAKFLGT
Sbjct: 205 DCTDMFKMNQLLAKHIIPLGPTKESQAKRVKLDAEIKIESAEPASSTVVISEALAKFLGT 264
Query: 291 GGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNH 350
GREM QAEA + VWEYIK++HLEDPLN+MVILCDAKL+ELLGCESISALGI EMLAR+H
Sbjct: 265 EGREMQQAEAIRLVWEYIKLHHLEDPLNAMVILCDAKLQELLGCESISALGIPEMLARHH 324
Query: 351 FLRQS 355
+QS
Sbjct: 325 LFKQS 329
>gi|255645561|gb|ACU23275.1| unknown [Glycine max]
Length = 332
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 235/364 (64%), Positives = 261/364 (71%), Gaps = 46/364 (12%)
Query: 1 MVSDQEIAKGVETLLRQSDRNASTSLNGVVKQLEAKLGLDLSHKAGFIRDQISLLLRSHP 60
MV+DQ+IAKGVE+LLR SD N+ T++NGVV+QLEAKLGLDLSHKA FIRDQI LLRS
Sbjct: 1 MVTDQDIAKGVESLLRHSDPNSITTVNGVVQQLEAKLGLDLSHKASFIRDQIDHLLRS-- 58
Query: 61 TPQQVATNTQPQ---PQPQPQQLPPKDHFTLQHHPQFSLPPQQFPPHFALHHPHPHLPQF 117
QPQ P P P KD+F HPQ P FP HFALH
Sbjct: 59 ---------QPQAFVPHPPPLH---KDYFA--PHPQPHFPTTHFPSHFALH--------- 95
Query: 118 PQELNFSQPQPSQAAAPPPQPHSNVSKAEAFPQISA------EVAKENPPVGAKRRGGPG 171
E+NF Q APPP K E FP +A +V KE+ GAKRRGG G
Sbjct: 96 -DEINFQQ----HPRAPPP------CKVETFPPQNAHTVAPPQVPKESVQTGAKRRGGAG 144
Query: 172 GLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFET 231
GLNKVCGVSPELQAVVG+PAMPRTEIV+QLWAYI+KNNLQDP NKRKIICDDALR+VFET
Sbjct: 145 GLNKVCGVSPELQAVVGEPAMPRTEIVRQLWAYIKKNNLQDPGNKRKIICDDALRLVFET 204
Query: 232 DCTDMFKMNKLLAKHIIPLEPTKES-SKRFKPDAESTTEGMESGPSSVIISEALAKFLGT 290
DCTDMFKMN+LLAKHIIPL PTKES +KR K DAE E E +V+I EALAKFLGT
Sbjct: 205 DCTDMFKMNQLLAKHIIPLGPTKESQAKRVKLDAEIKIESAEPASFTVVIFEALAKFLGT 264
Query: 291 GGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNH 350
GREM QAEA + VWEYIK+ HLEDPLN+MVILCDAKL+ELLGCESI ALGI EMLAR+H
Sbjct: 265 EGREMQQAEAIRLVWEYIKLPHLEDPLNAMVILCDAKLQELLGCESIFALGIPEMLARHH 324
Query: 351 FLRQ 354
+Q
Sbjct: 325 LFKQ 328
>gi|225460811|ref|XP_002275854.1| PREDICTED: uncharacterized protein LOC100264067 [Vitis vinifera]
gi|297737516|emb|CBI26717.3| unnamed protein product [Vitis vinifera]
Length = 331
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 214/358 (59%), Positives = 249/358 (69%), Gaps = 30/358 (8%)
Query: 1 MVSDQEIAKGVETLLRQSDRNASTSLNGVVKQLEAKLGLDLSHKAGFIRDQISLLLRSHP 60
MV+D+ IA+ +++L+R+S + TS+NGVV QLE+KLGL+LSHK FIR QI L +SH
Sbjct: 1 MVTDEAIAEALDSLIRESTPSQFTSINGVVLQLESKLGLNLSHKLEFIRSQIHLFFQSHQ 60
Query: 61 TPQQVATNTQPQPQPQPQQLPPKDHFTLQHHPQFSLPPQQFPPHFALHHPHPHLPQFPQE 120
Q P Q P KDHFTLQ FS P F PH ++
Sbjct: 61 PQSQPPPPQPPSQQQPP-----KDHFTLQQATNFSTGPPNFAPHRT------------ED 103
Query: 121 LNFSQPQPSQAAAPPPQPHSNVSKAEAFPQISAEVAKENPPVGAKRRGGPGGLNKVCGVS 180
LNF + A V+ EA PQ SA G KRRGGPGGLNKVCGVS
Sbjct: 104 LNFRRDPTPAPPAE--PTGGPVAVPEAPPQESARA-------GTKRRGGPGGLNKVCGVS 154
Query: 181 PELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMN 240
PELQ +VGQPA+PRTEIVKQLWAYIR+NNLQDPSNKRKIIC+D LR+VFETD TDMFKMN
Sbjct: 155 PELQTIVGQPALPRTEIVKQLWAYIRRNNLQDPSNKRKIICNDELRLVFETDSTDMFKMN 214
Query: 241 KLLAKHIIPLEPTKES---SKRFKPDAESTTEGMESGPSSVIISEALAKFLGTGGREMLQ 297
KLLAKHIIPLEPTK+S SK+ K DA + T+ ESGP V+ISEALA F GT GREMLQ
Sbjct: 215 KLLAKHIIPLEPTKQSGEQSKKLKVDAGAGTKSSESGP-YVVISEALANFFGTSGREMLQ 273
Query: 298 AEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNHFLRQS 355
+E +RVWEYIKVNHLEDPLNSMVILCDAKL+E+ GCESISALGI E+L R+H ++S
Sbjct: 274 SEVLRRVWEYIKVNHLEDPLNSMVILCDAKLQEIFGCESISALGIPEILMRHHLCKRS 331
>gi|449465075|ref|XP_004150254.1| PREDICTED: uncharacterized protein LOC101217066 [Cucumis sativus]
Length = 342
Score = 358 bits (920), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 210/367 (57%), Positives = 243/367 (66%), Gaps = 37/367 (10%)
Query: 1 MVSDQEIAKGVETLLRQS----DRNASTSLNGVVKQLEAKLGLDLSHKAGFIRDQISLLL 56
MV+DQE+++ ++ LLR S + N +SLN VV++L+ KLGLDLSHK FI QI +L
Sbjct: 1 MVTDQELSQAIQCLLRDSASPTNPNPFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFIL 60
Query: 57 RSHPTPQQVATNTQPQPQPQPQQ--LPP--KDHFTLQHHPQFSLPPQQFPPHFALHHPHP 112
RSHP + Q QQ LP KD F L P F P P A H
Sbjct: 61 RSHPQQPHHHQHHHHHHHQQQQQQQLPSSQKDLFALHQSPNFQSAPS--PTSSAFH---- 114
Query: 113 HLPQFPQELNFSQPQPSQAAAPPPQPHSNVSKAEAFPQISAEVAKENPPVGAKRRGGPGG 172
FS A PP +P S V A P ++ KE+ KRRGGPGG
Sbjct: 115 ---------TFS------AQPPPAKPDSVV--APTVP--GSDPPKESTQTKTKRRGGPGG 155
Query: 173 LNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETD 232
LNK+CGVSPELQA+VGQP +PRTEIVKQLWAYIRKNNLQDPSNKRKIIC+D LR+VFETD
Sbjct: 156 LNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETD 215
Query: 233 CTDMFKMNKLLAKHIIPLEPTK-ESSKRFKPDAESTTEGMESGPS---SVIISEALAKFL 288
CTDMFKMNKLLAKHIIPLEPTK SSK+ + + ES + PS SVIISEALA F
Sbjct: 216 CTDMFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVSVKSAEPSICPSVIISEALANFF 275
Query: 289 GTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLAR 348
G GREMLQ+E +R+WEYIKVNHLEDPLN M +LCDAKLREL GCESISALGI E+L R
Sbjct: 276 GVDGREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGR 335
Query: 349 NHFLRQS 355
+H R+S
Sbjct: 336 HHIFRRS 342
>gi|21537175|gb|AAM61516.1| unknown [Arabidopsis thaliana]
Length = 385
Score = 358 bits (918), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 209/391 (53%), Positives = 252/391 (64%), Gaps = 42/391 (10%)
Query: 1 MVSDQEIAKGVETLLRQSDRNASTSLNGVVKQLEAKLGLDLSHKAGFIRDQISLLLRSHP 60
MVSDQ++AKGVETLLRQSD ++ TSL+ +V+QLEAKLGLDL+ K FIRDQI++LLR+H
Sbjct: 1 MVSDQDLAKGVETLLRQSDPSSLTSLSSIVQQLEAKLGLDLTEKTTFIRDQINILLRAHQ 60
Query: 61 TPQQVATNTQPQPQPQPQ---------------QLPP--KDHFTLQH--HPQFSLPPQQF 101
P + Q P +PP K HFTL H S QQ+
Sbjct: 61 NPSASVASASSVQQSHPPPPPSSHQQQNLHSGVNVPPMAKGHFTLSHPSQFSVSSQSQQY 120
Query: 102 PPHFALHHPHPHLPQFPQELNFSQPQPSQAAAPPPQPHSNVSKAEAFPQISA-------- 153
P HFAL P+ +LNF QP P Q + + + +
Sbjct: 121 PSHFALQPPY-----HSYDLNFRQPYPVYMPPQQHQHQQQSPRQQQSSVMLSHGGNASLS 175
Query: 154 --EVAKENPPVGAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQ 211
+ KE+ P G KR+GGPGGLNKVC VSPEL+ VVG+PA+PRTEIV+QLWAYIRKNNLQ
Sbjct: 176 VNQAPKESAPAGTKRKGGPGGLNKVCRVSPELEVVVGEPALPRTEIVRQLWAYIRKNNLQ 235
Query: 212 DPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEPTKESSKRFKPDAESTTEGM 271
DPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHI+PL+P+K+S + K E T+
Sbjct: 236 DPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHILPLDPSKDSGQAKKAKTEVETKTE 295
Query: 272 ESGP-------SSVIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILC 324
+ P S+V +SE L KF GTG EM E +RVWEYIK+N+LEDP+N M I C
Sbjct: 296 TTEPVSSTAISSTVTLSEPLGKFFGTGETEMADEEIIRRVWEYIKLNNLEDPVNPMAIQC 355
Query: 325 DAKLRELLGCESISALGIQEMLARNHFLRQS 355
D KLR+LLGCESISA+GI EML R H +QS
Sbjct: 356 DEKLRDLLGCESISAVGINEML-RRHMYKQS 385
>gi|18415906|ref|NP_567661.1| SWIB complex BAF60b domain-containing protein [Arabidopsis
thaliana]
gi|16604705|gb|AAL24145.1| unknown protein [Arabidopsis thaliana]
gi|20258979|gb|AAM14205.1| unknown protein [Arabidopsis thaliana]
gi|332659200|gb|AEE84600.1| SWIB complex BAF60b domain-containing protein [Arabidopsis
thaliana]
Length = 385
Score = 358 bits (918), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 209/391 (53%), Positives = 252/391 (64%), Gaps = 42/391 (10%)
Query: 1 MVSDQEIAKGVETLLRQSDRNASTSLNGVVKQLEAKLGLDLSHKAGFIRDQISLLLRSHP 60
MVSDQ++AKGVETLLRQSD ++ TSL+ +V+QLEAKLGLDL+ K FIRDQI++LLR+H
Sbjct: 1 MVSDQDLAKGVETLLRQSDPSSLTSLSSIVQQLEAKLGLDLTEKTTFIRDQINILLRAHQ 60
Query: 61 TPQQVATNTQPQPQPQPQ---------------QLPP--KDHFTLQH--HPQFSLPPQQF 101
P + Q P +PP K HFTL H S QQ+
Sbjct: 61 NPSASVASASSVQQSHPPPPPSSHQQQNLHSGVNVPPMAKGHFTLSHPSQFSVSSQSQQY 120
Query: 102 PPHFALHHPHPHLPQFPQELNFSQPQPSQAAAPPPQPHSNVSKAEAFPQISA-------- 153
P HFAL P+ +LNF QP P Q + + + +
Sbjct: 121 PSHFALQPPY-----HSYDLNFRQPYPVYMPPQQHQHQQQSPRQQQSSVMLSHGGNASLS 175
Query: 154 --EVAKENPPVGAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQ 211
+ KE+ P G KR+GGPGGLNKVC VSPEL+ VVG+PA+PRTEIV+QLWAYIRKNNLQ
Sbjct: 176 VNQAPKESAPAGTKRKGGPGGLNKVCRVSPELEVVVGEPALPRTEIVRQLWAYIRKNNLQ 235
Query: 212 DPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEPTKESSKRFKPDAESTTEGM 271
DPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHI+PL+P+K+S + K E T+
Sbjct: 236 DPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHILPLDPSKDSGQAKKAKTEVETKTE 295
Query: 272 ESGP-------SSVIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILC 324
+ P S+V +SE L KF GTG EM E +RVWEYIK+N+LEDP+N M I C
Sbjct: 296 TTEPISSTAISSTVTLSEPLGKFFGTGETEMADEEIIRRVWEYIKLNNLEDPVNPMAIQC 355
Query: 325 DAKLRELLGCESISALGIQEMLARNHFLRQS 355
D KLR+LLGCESISA+GI EML R H +QS
Sbjct: 356 DEKLRDLLGCESISAVGINEML-RRHMYKQS 385
>gi|297803886|ref|XP_002869827.1| hypothetical protein ARALYDRAFT_492627 [Arabidopsis lyrata subsp.
lyrata]
gi|297315663|gb|EFH46086.1| hypothetical protein ARALYDRAFT_492627 [Arabidopsis lyrata subsp.
lyrata]
Length = 370
Score = 353 bits (906), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 207/386 (53%), Positives = 241/386 (62%), Gaps = 47/386 (12%)
Query: 1 MVSDQEIAKGVETLLRQSDRNASTSLNGVVKQLEAKLGLDLSHKAGFIRDQISLLLRSHP 60
MVSDQ++AKGVETLLRQSD ++ TSL VV+QLEAKLGLDL+ K FIRDQI++LLRSH
Sbjct: 1 MVSDQDLAKGVETLLRQSDPSSLTSLTSVVQQLEAKLGLDLTEKTTFIRDQINILLRSHQ 60
Query: 61 TPQQVATNTQPQ-----PQPQPQQ-------LP-PKDHFTLQH-HPQFSLPPQQFPPHFA 106
P + P P QQ +P K HFTL H QQ+PPHFA
Sbjct: 61 IPSASVASASSVQQSHPPPPSSQQNLHSGVNVPVAKGHFTLSHPSQFSVSQSQQYPPHFA 120
Query: 107 LHHPHPHLPQFPQELNFSQPQP-----SQAAAPPPQPHSNVSKAEAFPQISAEVAKENPP 161
L P+ +LNF QP P Q + Q + + KE+ P
Sbjct: 121 LQPPY-----HSYDLNFRQPYPVYMPPQQHQHQHQHQSPRQQSSVMLSQGANQAPKESAP 175
Query: 162 VGAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIIC 221
G KR+GGPGGLNKVC VSPELQ V IV+QLWAYIRKNNLQDPSNKRKIIC
Sbjct: 176 AGTKRKGGPGGLNKVCRVSPELQVV----------IVRQLWAYIRKNNLQDPSNKRKIIC 225
Query: 222 DDALRVVFETDCTDMFKMNKLLAKHIIPLEPTKESSKRFKPDA------------ESTTE 269
DDALRVVFETDCTDMFKMNKLLAKHI+PL+P+K+S + K A ST
Sbjct: 226 DDALRVVFETDCTDMFKMNKLLAKHILPLDPSKDSGQAKKAKAEVETKTETTEPVNSTAV 285
Query: 270 GMESGPSSVIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLR 329
+ S+V +SE LAKF GTG EM E +RVWEYIK+N+LEDP+N M I CD KLR
Sbjct: 286 SSAAVSSTVALSEPLAKFFGTGEAEMTDKEIIRRVWEYIKLNNLEDPVNPMAIQCDEKLR 345
Query: 330 ELLGCESISALGIQEMLARNHFLRQS 355
+LLGCESISA+GI EML R H +QS
Sbjct: 346 DLLGCESISAVGINEML-RRHMYKQS 370
>gi|356527109|ref|XP_003532156.1| PREDICTED: uncharacterized protein LOC100801960 [Glycine max]
Length = 330
Score = 343 bits (880), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 199/361 (55%), Positives = 239/361 (66%), Gaps = 37/361 (10%)
Query: 1 MVSDQEIAKGVETLLRQSDRNASTSLNGVVKQLEAKLGLDLSHKAGFIRDQISLLLRSHP 60
MV+++EI++ V++LLR+S+ + T+LN VV++L+AKLG DL+HK FI QI+LL S
Sbjct: 1 MVTEEEISEAVQSLLRESNPSRFTTLNQVVEELQAKLGHDLTHKIDFITAQINLLFGSRQ 60
Query: 61 TPQQVATNTQPQPQPQPQQLPPKDHFTLQHHPQFSLPPQQFPPHFALHHPHPHLPQFPQE 120
PQ P Q QQ PKDHF PP P+P+ P
Sbjct: 61 PPQN--------PHRQLQQ--PKDHFA--------------PP------PNPNFHSAPVS 90
Query: 121 LNFS-QPQPSQAAAPPPQPHSNVSKAEA--FPQI--SAEVAKENPPVGAKRRGGPGGLNK 175
+ F Q S A ++ S+ EA P + +V KE+ KRRGGPGGL K
Sbjct: 91 VGFQLQNFSSSNAVVAAATAADASRIEAPSAPVVVEGNQVPKESTQTKVKRRGGPGGLTK 150
Query: 176 VCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTD 235
+CGVSPELQ +VGQPA+ RTEIVKQLWAYIRKNNLQDPSNKRKIIC+D LRVVFETDCTD
Sbjct: 151 ICGVSPELQVIVGQPALSRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRVVFETDCTD 210
Query: 236 MFKMNKLLAKHIIPLEPT-KESSKRFKPDAESTTEGMESGPSSVIISEALAKFLGTGGRE 294
MFKMNKLL+KHIIPLEPT K K+ K D ES T E P SVIIS+ALA F G GRE
Sbjct: 211 MFKMNKLLSKHIIPLEPTKKPVPKKQKVDVESGTRSAEPTP-SVIISDALANFFGITGRE 269
Query: 295 MLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNHFLRQ 354
MLQ+E +R+WEYIKVN LEDP N M I+CD KL+E+ GCESISALGI E+L R+H R
Sbjct: 270 MLQSEVLRRIWEYIKVNQLEDPANPMAIVCDGKLQEIFGCESISALGIPEVLGRHHIFRS 329
Query: 355 S 355
S
Sbjct: 330 S 330
>gi|449508329|ref|XP_004163283.1| PREDICTED: uncharacterized LOC101217066, partial [Cucumis sativus]
Length = 341
Score = 335 bits (858), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 198/350 (56%), Positives = 225/350 (64%), Gaps = 31/350 (8%)
Query: 28 GVVKQLEAKLGLDLSHKAGFIRDQISLLLRSHPTPQQVATNTQPQPQPQPQQ--LPP--K 83
VV++L+ KLGLDLSHK FI QI +LRSHP + Q QQ LP K
Sbjct: 1 AVVQELQTKLGLDLSHKLDFIHAQIQFILRSHPQQPHHHQHHHHHHHQQQQQQQLPSSQK 60
Query: 84 DHFTLQHHPQFSLPPQQFPPHFALH----HPHPHLPQFPQELNFSQPQPSQAAAPPPQPH 139
D F L P F P P A H P P P S P+ + PP+
Sbjct: 61 DLFALHQSPNFQSAPS--PTSSAFHTFSAQPPPAKPD-------SVVAPTVPGSDPPKEG 111
Query: 140 SNV--SKAEAFPQISAEVAK--------ENPPVGAKRRGGPGGLNKVCGVSPELQAVVGQ 189
S S + +IS + EN KRRGGPGGLNK+CGVSPELQA+VGQ
Sbjct: 112 SASFSSGLRSLFRISGQKCDFLLLSWLLENTQTKTKRRGGPGGLNKLCGVSPELQAIVGQ 171
Query: 190 PAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHIIP 249
P +PRTEIVKQLWAYIRKNNLQDPSNKRKIIC+D LR+VFETDCTDMFKMNKLLAKHIIP
Sbjct: 172 PELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIP 231
Query: 250 LEPTK-ESSKRFKPDAESTTEGMESGPS---SVIISEALAKFLGTGGREMLQAEATKRVW 305
LEPTK SSK+ + + ES + PS SVIISEALA F G GREMLQ+E +R+W
Sbjct: 232 LEPTKPSSSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIW 291
Query: 306 EYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNHFLRQS 355
EYIKVNHLEDPLN M +LCDAKLREL GCESISALGI E+L R+H R+S
Sbjct: 292 EYIKVNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS 341
>gi|357459823|ref|XP_003600192.1| Upstream activation factor subunit UAF30 [Medicago truncatula]
gi|355489240|gb|AES70443.1| Upstream activation factor subunit UAF30 [Medicago truncatula]
Length = 350
Score = 317 bits (811), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 189/375 (50%), Positives = 232/375 (61%), Gaps = 49/375 (13%)
Query: 2 VSDQEIAKGVETLLRQSD--RNASTSLNGVVKQLEAKLG-LDLSHKAGFIRDQISLLLRS 58
V+++EI + +L +++ T+LN VV +L++KLG DL+HK FI +QI+LL +
Sbjct: 4 VTEEEICSAIHSLFTETNPRTRTFTTLNQVVSELQSKLGGYDLTHKIDFITEQINLLFAA 63
Query: 59 HPTPQQVATNTQPQPQPQPQ----------QLPPKDHFTLQHHPQFSLPPQQFPPHFALH 108
QQ + Q Q Q KDHFTL
Sbjct: 64 SSQHQQQHVHHHQQQQLQQPPPPQQQPQLISFERKDHFTL-------------------- 103
Query: 109 HPHPHLPQFPQELNFSQPQPSQAAAPPPQPHSNVSKAEAFPQISAEVAKENPPVGAKRRG 168
H +P+ P F +AA ++VS A P+ E A+ P KRRG
Sbjct: 104 HQNPNSHSVPVTSAFRNNVVVSSAAVADASVAHVS-ANVLPK---ESAQPKP----KRRG 155
Query: 169 GPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVV 228
GPGGLNK+CGVSPELQ +VGQPAMPRTEIVKQLWAYI+KNNLQDPSNKRKIIC+D LRVV
Sbjct: 156 GPGGLNKLCGVSPELQVIVGQPAMPRTEIVKQLWAYIKKNNLQDPSNKRKIICNDELRVV 215
Query: 229 FETDCTDMFKMNKLLAKHIIPLEPT-------KESSKRFKPDAESTTEGMESGPS-SVII 280
FETDCTDMFKMNKLLAKHII LEPT K + K+ K + E T E P+ SVII
Sbjct: 216 FETDCTDMFKMNKLLAKHIIALEPTSKCLGYEKPAPKKQKVEVEVGTRSAEPAPTPSVII 275
Query: 281 SEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISAL 340
S++LA F G GREMLQ E +R+WEYIKVN LEDP+N M I+CDAKL+E+ GCESISAL
Sbjct: 276 SDSLANFFGVTGREMLQTEVLRRIWEYIKVNQLEDPVNPMAIMCDAKLQEIFGCESISAL 335
Query: 341 GIQEMLARNHFLRQS 355
GI E+L R+H R+S
Sbjct: 336 GIPEVLGRHHIFRRS 350
>gi|2832686|emb|CAA16786.1| putative protein [Arabidopsis thaliana]
gi|7269082|emb|CAB79191.1| putative protein [Arabidopsis thaliana]
Length = 369
Score = 303 bits (777), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 181/350 (51%), Positives = 220/350 (62%), Gaps = 41/350 (11%)
Query: 1 MVSDQEIAKGVETLLRQSDRNASTSLNGVVKQLEAKLGLDLSHKAGFIRDQISLLLRSHP 60
MVSDQ++AKGVETLLRQSD ++ TSL+ +V+QLEAKLGLDL+ K FIRDQI++LLR+H
Sbjct: 1 MVSDQDLAKGVETLLRQSDPSSLTSLSSIVQQLEAKLGLDLTEKTTFIRDQINILLRAHQ 60
Query: 61 TPQQVATNTQPQPQPQPQ---------------QLPP--KDHFTLQH--HPQFSLPPQQF 101
P + Q P +PP K HFTL H S QQ+
Sbjct: 61 NPSASVASASSVQQSHPPPPPSSHQQQNLHSGVNVPPMAKGHFTLSHPSQFSVSSQSQQY 120
Query: 102 PPHFALHHPHPHLPQFPQELNFSQPQPSQAAAPPPQPHSNVSKAEAFPQISA-------- 153
P HFAL P+ +LNF QP P Q + + + +
Sbjct: 121 PSHFALQPPY-----HSYDLNFRQPYPVYMPPQQHQHQQQSPRQQQSSVMLSHGGNASLS 175
Query: 154 --EVAKENPPVGAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQ 211
+ KE+ P G KR+GGPGGLNKVC VSPEL+ VVG+PA+PRTEIV+QLWAYIRKNNLQ
Sbjct: 176 VNQAPKESAPAGTKRKGGPGGLNKVCRVSPELEVVVGEPALPRTEIVRQLWAYIRKNNLQ 235
Query: 212 DPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEPTKESSKRFKPDAESTTEGM 271
DPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHI+PL+P+K+S + K E T+
Sbjct: 236 DPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHILPLDPSKDSGQAKKAKTEVETKTE 295
Query: 272 ESGP-------SSVIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLE 314
+ P S+V +SE L KF GTG EM E +RVWEYIK+N+LE
Sbjct: 296 TTEPISSTAISSTVTLSEPLGKFFGTGETEMADEEIIRRVWEYIKLNNLE 345
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 297 QAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNHFL 352
+ E +++W YI+ N+L+DP N I+CD LR + + + ++LA+ H L
Sbjct: 218 RTEIVRQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAK-HIL 272
>gi|195626374|gb|ACG35017.1| SWIB/MDM2 domain containing protein [Zea mays]
Length = 387
Score = 294 bits (752), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 186/403 (46%), Positives = 230/403 (57%), Gaps = 64/403 (15%)
Query: 1 MVSDQEIAKGVETLLRQSDRN-ASTSLNGVVKQLEAKLGLDLSHKAGFIRDQISLLL--R 57
MVSDQEIA VE++LR S SL V++Q EA LG+DLSHKAGFIRDQ+ L R
Sbjct: 1 MVSDQEIASCVESVLRGSAGGPGEVSLTAVLQQAEATLGVDLSHKAGFIRDQMDLFFGPR 60
Query: 58 SHPTP-------------QQVATNTQPQPQPQPQQLP------------------PKDHF 86
P P + PQPQPQ Q LP P+ F
Sbjct: 61 LQPQPLTTPQLAPPPPQAVVAPADAVPQPQPQHQVLPQAPPSAQQMQPQQLAPLQPQLMF 120
Query: 87 -TLQHHPQFS-LPPQQFPPHFALHHPHPHLPQFPQEL---------NFSQPQPSQAAAPP 135
T+ P S +P PP A + P P ++ L +F QP P
Sbjct: 121 QTIHQLPAISPVPVVSAPPAMAFYPPPPLAFRYTTGLAGAATGGTVSFQQPAPG------ 174
Query: 136 PQPHSNVSKAEAFPQISAEVAKENPPVGAKR-RGGPGGLNKVCGVSPELQAVVGQPAMPR 194
+ A P + +VA +N +KR RGGPGGLNKVC +SPELQ +VG+ AM R
Sbjct: 175 -------AGGTASPTAAPQVAGDNKESSSKRKRGGPGGLNKVCAISPELQTIVGETAMSR 227
Query: 195 TEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEPTK 254
T+IVKQLWAYIR+NNLQDP +KRKIIC+D LRVVFETD TDMFKMNKLLAKHI PL+P
Sbjct: 228 TQIVKQLWAYIRQNNLQDPDDKRKIICNDELRVVFETDTTDMFKMNKLLAKHITPLDPKS 287
Query: 255 E--SSKRFKPDAESTTEGMESGPSSVIISEALAKFLGTGGREMLQAEATKRVWEYIKVNH 312
+ KR K S G S++IS+ALAKF+GT G Q +A K +W+YIK N
Sbjct: 288 QLHEVKRMKAPTMSPQPGRPIDQPSIVISDALAKFIGTDG-TFPQDDALKYLWDYIKANQ 346
Query: 313 LEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNHFLRQS 355
LED +N ILCD+KL+EL GCESI G+ EML +HF++++
Sbjct: 347 LEDVINE-SILCDSKLQELFGCESIPMSGLSEMLG-HHFIKKT 387
>gi|239049993|ref|NP_001131941.2| uncharacterized protein LOC100193333 [Zea mays]
gi|238908634|gb|ACF80572.2| unknown [Zea mays]
gi|238908806|gb|ACF86689.2| unknown [Zea mays]
gi|413919846|gb|AFW59778.1| SWIB/MDM2 domain containing protein isoform 1 [Zea mays]
gi|413919847|gb|AFW59779.1| SWIB/MDM2 domain containing protein isoform 2 [Zea mays]
Length = 387
Score = 290 bits (742), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 185/403 (45%), Positives = 228/403 (56%), Gaps = 64/403 (15%)
Query: 1 MVSDQEIAKGVETLLRQSDRN-ASTSLNGVVKQLEAKLGLDLSHKAGFIRDQISLLL--R 57
MVSDQEIA VE++LR S SL V++Q EA LG+DLSHKAGFIRDQ+ L R
Sbjct: 1 MVSDQEIASCVESVLRGSAGGPGEVSLTAVLQQAEATLGVDLSHKAGFIRDQMDLFFGPR 60
Query: 58 SHPTP-------------QQVATNTQPQPQPQPQQLP------------------PKDHF 86
P P + PQPQPQ Q LP P+ F
Sbjct: 61 LQPQPLTTPQLAPPPPQAVVAPADAVPQPQPQHQVLPQAPPSAQQMQPQQLAPLQPQLMF 120
Query: 87 -TLQHHPQFS-LPPQQFPPHFALHHPHPHLPQFPQEL---------NFSQPQPSQAAAPP 135
T+ P S +P PP A + P P ++ L +F QP P
Sbjct: 121 QTIHQLPAISPVPVVSAPPAMAFYPPPPLAFRYTTGLAGAATGGTVSFQQPAPG------ 174
Query: 136 PQPHSNVSKAEAFPQISAEVAKENPPVGAKR-RGGPGGLNKVCGVSPELQAVVGQPAMPR 194
+ A P + +VA +N +KR RGGPGGLNKVC +SPELQ +VG+ AM R
Sbjct: 175 -------AGGTASPTAAPQVAGDNKESSSKRKRGGPGGLNKVCAISPELQTIVGETAMSR 227
Query: 195 TEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEPTK 254
T+IVKQLWAYIR+NNLQDP +KRKIIC+D LRVVFETD TDMFKMNKLLAKHI PL+P
Sbjct: 228 TQIVKQLWAYIRQNNLQDPDDKRKIICNDELRVVFETDNTDMFKMNKLLAKHITPLDPKG 287
Query: 255 E--SSKRFKPDAESTTEGMESGPSSVIISEALAKFLGTGGREMLQAEATKRVWEYIKVNH 312
+ KR K S G S++IS+ALAKF+GT G A K +W+YIK N
Sbjct: 288 QLHEVKRMKAPTMSPQPGRSIDQPSIVISDALAKFIGTDG-TFPHDFALKYLWDYIKANQ 346
Query: 313 LEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNHFLRQS 355
LED +N ILCD+KL+EL GCESI G+ EML +HF++++
Sbjct: 347 LEDVINE-SILCDSKLQELFGCESIPMSGLSEMLG-HHFIKKT 387
>gi|357148363|ref|XP_003574734.1| PREDICTED: uncharacterized protein LOC100842878 [Brachypodium
distachyon]
Length = 416
Score = 281 bits (718), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 136/209 (65%), Positives = 165/209 (78%), Gaps = 6/209 (2%)
Query: 152 SAEVAKENPPVGAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQ 211
SA+ KE+ G KRRGGPGGLNKVCGVSPELQ +VG+P M RTEIVKQLWAYIR+NNLQ
Sbjct: 206 SAKPKKESASTGVKRRGGPGGLNKVCGVSPELQVIVGEPTMARTEIVKQLWAYIRRNNLQ 265
Query: 212 DPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEPTKES---SKRFKPDAESTT 268
DP+NKRKIIC+D LR+VFETDCTDMFKMNKLLAKHI PLEP K+S SK+ KP
Sbjct: 266 DPNNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIRPLEPAKDSNRDSKKLKPVDSEPI 325
Query: 269 EGMESGPSS--VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDA 326
ES P+ VI+S+ALA F GTG REM +EA KRVW++IK N+LEDP N +ILCD+
Sbjct: 326 SPAESDPNQLPVIVSDALASFFGTGEREMPHSEAVKRVWDHIKSNNLEDPSNPTLILCDS 385
Query: 327 KLRELLGCESISALGIQEMLARNHFLRQS 355
KL++L GCES++ALG+ E+L+ +H +Q+
Sbjct: 386 KLKDLFGCESLTALGVSELLS-DHLFKQA 413
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 56/113 (49%), Gaps = 16/113 (14%)
Query: 1 MVSDQEIAKGVETLLRQSDRNAS-----TSLNGVVKQLEAKLGLDLSHKAGFIRDQISLL 55
MVSDQE+A+ VE+L+RQ+ A S GVV+QLEA+LG+DL+ +A IRD + L
Sbjct: 1 MVSDQELARYVESLVRQAVAAAGGHAGGISTEGVVRQLEAQLGVDLAPRAPLIRDILVAL 60
Query: 56 LRSHPTPQQVATNTQPQPQPQPQQLPPKDHFTLQHHPQFSLPPQQFPPHFALH 108
L +P A+ P P HF S P PHF H
Sbjct: 61 L----SPVAPASRKDPFATASP-------HFAAATTASASSAPGAGVPHFFAH 102
>gi|224029061|gb|ACN33606.1| unknown [Zea mays]
gi|413919845|gb|AFW59777.1| hypothetical protein ZEAMMB73_047514 [Zea mays]
Length = 356
Score = 278 bits (711), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 177/372 (47%), Positives = 217/372 (58%), Gaps = 33/372 (8%)
Query: 1 MVSDQEIAKGVETLLRQSDRN-ASTSLNGVVKQLEAKLGLDLSHKAGFIRDQISLLLRSH 59
MVSDQEIA VE++LR S SL V++Q EA LG+DLSHKAGFIRDQ+ L
Sbjct: 1 MVSDQEIASCVESVLRGSAGGPGEVSLTAVLQQAEATLGVDLSHKAGFIRDQMDLFFGPR 60
Query: 60 PTPQQVATNTQPQPQPQPQQLPPKDHFTLQHHPQFS----LPPQQFPPHFALHHPHPHLP 115
PQ + T P PQ P Q Q +P PP A + P P
Sbjct: 61 LQPQPLTTPQLAPPPPQAVVAPADAVPQPQPQHQLPAISPVPVVSAPPAMAFYPPPPLAF 120
Query: 116 QFPQEL---------NFSQPQPSQAAAPPPQPHSNVSKAEAFPQISAEVAKENPPVGAKR 166
++ L +F QP P A P + +VA +N +KR
Sbjct: 121 RYTTGLAGAATGGTVSFQQPAPGAGGT-------------ASPTAAPQVAGDNKESSSKR 167
Query: 167 -RGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDAL 225
RGGPGGLNKVC +SPELQ +VG+ AM RT+IVKQLWAYIR+NNLQDP +KRKIIC+D L
Sbjct: 168 KRGGPGGLNKVCAISPELQTIVGETAMSRTQIVKQLWAYIRQNNLQDPDDKRKIICNDEL 227
Query: 226 RVVFETDCTDMFKMNKLLAKHIIPLEPTKE--SSKRFKPDAESTTEGMESGPSSVIISEA 283
RVVFETD TDMFKMNKLLAKHI PL+P + KR K S G S++IS+A
Sbjct: 228 RVVFETDNTDMFKMNKLLAKHITPLDPKGQLHEVKRMKAPTMSPQPGRSIDQPSIVISDA 287
Query: 284 LAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQ 343
LAKF+GT G A K +W+YIK N LED +N ILCD+KL+EL GCESI G+
Sbjct: 288 LAKFIGTDG-TFPHDFALKYLWDYIKANQLEDVINES-ILCDSKLQELFGCESIPMSGLS 345
Query: 344 EMLARNHFLRQS 355
EML +HF++++
Sbjct: 346 EMLG-HHFIKKT 356
>gi|242082305|ref|XP_002445921.1| hypothetical protein SORBIDRAFT_07g028070 [Sorghum bicolor]
gi|241942271|gb|EES15416.1| hypothetical protein SORBIDRAFT_07g028070 [Sorghum bicolor]
Length = 427
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 126/199 (63%), Positives = 159/199 (79%), Gaps = 5/199 (2%)
Query: 162 VGAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIIC 221
GAKRRGGPGGLNKVCGVSPELQA+VG+PAM RTEIVKQLWAYIR+NNLQDP+NKRKIIC
Sbjct: 226 AGAKRRGGPGGLNKVCGVSPELQAIVGEPAMARTEIVKQLWAYIRRNNLQDPNNKRKIIC 285
Query: 222 DDALRVVFETDCTDMFKMNKLLAKHIIPLEP---TKESSKRFKPDAESTTEGMESGPSS- 277
+D LR+VFETD TDMF+MNKLL+KHI PLE +K +K+ KP+ +E+ +
Sbjct: 286 NDELRLVFETDSTDMFQMNKLLSKHIRPLESKNDSKREAKKLKPEGGEQIPKVETDVNQL 345
Query: 278 -VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCES 336
+ +S+ALA F GTG REM+ +EA KRVWE+IK N+LEDP N VILCD+KL++L GCES
Sbjct: 346 PLTVSDALATFFGTGEREMVHSEAVKRVWEHIKSNNLEDPENPTVILCDSKLKQLFGCES 405
Query: 337 ISALGIQEMLARNHFLRQS 355
++A G+ E+L+ + + +QS
Sbjct: 406 LAAHGVSELLSDHLYKQQS 424
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 40/68 (58%)
Query: 187 VGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKH 246
G+ M +E VK++W +I+ NNL+DP N I+CD L+ +F + +++LL+ H
Sbjct: 359 TGEREMVHSEAVKRVWEHIKSNNLEDPENPTVILCDSKLKQLFGCESLAAHGVSELLSDH 418
Query: 247 IIPLEPTK 254
+ + TK
Sbjct: 419 LYKQQSTK 426
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 1 MVSDQEIAKGVETLLRQSDRNAST--SLNGVVKQLEAKLGLDLSHKAGFIRDQISLLL 56
M+SDQE+A+ VE+ ++ + T S + VV+QL A+LG+DLS KA IR + LL
Sbjct: 1 MLSDQELAQYVESFVQHTAAQGGTGISADAVVRQLGAQLGVDLSPKAHLIRSVLVALL 58
>gi|115477150|ref|NP_001062171.1| Os08g0502800 [Oryza sativa Japonica Group]
gi|42407772|dbj|BAD08918.1| parathymosin-like [Oryza sativa Japonica Group]
gi|42408131|dbj|BAD09270.1| parathymosin-like [Oryza sativa Japonica Group]
gi|113624140|dbj|BAF24085.1| Os08g0502800 [Oryza sativa Japonica Group]
Length = 406
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 129/208 (62%), Positives = 163/208 (78%), Gaps = 5/208 (2%)
Query: 149 PQISAEVAKENPPVGAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKN 208
P+ +A KE+ G KRRGGPGGLNKVCGVSPELQA+VG+P M RTEIVKQLWAYIR+N
Sbjct: 193 PRPAAASKKESASTGVKRRGGPGGLNKVCGVSPELQAIVGEPTMARTEIVKQLWAYIRRN 252
Query: 209 NLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEPTKES---SKRFKP-DA 264
NLQDP+NKRKIIC+D LR+VFETD TDMFKMNKLLAKHI PLE K+S SK+ KP D+
Sbjct: 253 NLQDPNNKRKIICNDELRLVFETDSTDMFKMNKLLAKHIRPLEAKKDSNRDSKKLKPVDS 312
Query: 265 ESTTEG-MESGPSSVIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVIL 323
E + + +I+S+ALA F GTG +EM +EA KRVW++IK N+LEDP N +IL
Sbjct: 313 EPISPAETDVNQLPIILSDALASFFGTGEKEMPSSEAVKRVWDHIKSNNLEDPANPTMIL 372
Query: 324 CDAKLRELLGCESISALGIQEMLARNHF 351
CD+KL++L GCES++A+ + E+L+++ F
Sbjct: 373 CDSKLKQLFGCESLTAVSVSELLSQHLF 400
Score = 41.6 bits (96), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 38/67 (56%), Gaps = 8/67 (11%)
Query: 1 MVSDQEIAKGVETLLRQSDRNAS-------TSLNGVVKQLEAKLGLDLSHKAGFIRDQIS 53
M+SDQE+A+ VE+ +RQ+ S V +QL +LGLDL+ KA IRD I
Sbjct: 1 MLSDQELARYVESFVRQAAAVPGAVAAAGGISAESVARQLGPQLGLDLTPKAPLIRD-IL 59
Query: 54 LLLRSHP 60
L L S P
Sbjct: 60 LALFSPP 66
>gi|357166606|ref|XP_003580766.1| PREDICTED: uncharacterized protein LOC100831700 [Brachypodium
distachyon]
Length = 391
Score = 260 bits (665), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 167/403 (41%), Positives = 215/403 (53%), Gaps = 63/403 (15%)
Query: 1 MVSDQEIAKGVETLLRQSDRNASTSLNGVVKQLEAKLGLDLSHKAGFIRDQISLLLRS-- 58
MVSDQEIA VE +LR + SL V+++ +++LG+DLSHKA +IRDQ+ L
Sbjct: 1 MVSDQEIASCVEAVLRSAGAGEGASLAAVLQRAQSELGVDLSHKAPYIRDQMDLFFGPRL 60
Query: 59 -------------------------------------HPTPQQVATNTQPQP--QPQPQQ 79
H PQQ QPQ Q PQ
Sbjct: 61 QQPPPPPQQQQQQPKPQQAPPASAPAPSPAMLTQVPLHVPPQQQLGTLQPQFIFQTMPQL 120
Query: 80 LPPKDHFTLQHHPQFSLPPQQF--PPHFALHHPHPHLPQFPQ--ELNFSQPQPSQAAAPP 135
++P F PP A + + L ++F QP P
Sbjct: 121 PGATAAAAAAVSAPQAVPAMAFYPPPPLAFRYANNALGGVATGGTVSFQQPAPGVGGTSS 180
Query: 136 PQPHSNVSKAEAFPQISAEVAKENPPVGAKR-RGGPGGLNKVCGVSPELQAVVGQPAMPR 194
P P P A+ +N +KR RGGPGGLNKVC +SPELQ VVG+ AM R
Sbjct: 181 PTPT---------PTAGAQAGGDNKESASKRKRGGPGGLNKVCAISPELQTVVGETAMSR 231
Query: 195 TEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEPTK 254
T+IVKQLWAYIR+NNLQDP +KRKIIC+D LRVVFETD TDMFKMNKLLAKHI PL+P+
Sbjct: 232 TQIVKQLWAYIRQNNLQDPDDKRKIICNDELRVVFETDATDMFKMNKLLAKHITPLDPSM 291
Query: 255 ---ESSKRFKPDAESTTEGME-SGPSSVIISEALAKFLGTGGREMLQAEATKRVWEYIKV 310
+K+FK A +T + M +++S+ALAKF+G G + +A K +W+YIK
Sbjct: 292 FLFHQAKKFK--AHNTAQEMPLVNEPYLVVSDALAKFIGIEG-SVPHHDALKYLWDYIKA 348
Query: 311 NHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNHFLR 353
N LED S I+CD+KL+EL GC SI A + E+LA ++ R
Sbjct: 349 NQLEDA-TSTSIICDSKLQELFGCASILASEVSELLAHHYIQR 390
>gi|218201407|gb|EEC83834.1| hypothetical protein OsI_29784 [Oryza sativa Indica Group]
Length = 394
Score = 258 bits (658), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 126/197 (63%), Positives = 155/197 (78%), Gaps = 5/197 (2%)
Query: 149 PQISAEVAKENPPVGAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKN 208
P+ +A KE+ G KRRGGPGGLNKVCGVSPELQA+VG+P M RTEIVKQLWAYIR+N
Sbjct: 192 PRPAAASKKESASTGVKRRGGPGGLNKVCGVSPELQAIVGEPTMARTEIVKQLWAYIRRN 251
Query: 209 NLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEPTKES---SKRFKP-DA 264
NLQDP+NKRKIIC+D LR+VFETD TDMFKMNKLLAKHI PLE K+S SK+ KP D+
Sbjct: 252 NLQDPNNKRKIICNDELRLVFETDSTDMFKMNKLLAKHIRPLEAKKDSNRDSKKLKPVDS 311
Query: 265 ESTTEG-MESGPSSVIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVIL 323
E + + +I+S+ALA F GTG +EM +EA KRVW++IK N+LEDP N +IL
Sbjct: 312 EPISPAETDVNQLPIILSDALASFFGTGEKEMPSSEAVKRVWDHIKSNNLEDPANPTMIL 371
Query: 324 CDAKLRELLGCESISAL 340
CD+KL++L GCES++A+
Sbjct: 372 CDSKLKQLFGCESLTAM 388
Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 33/54 (61%)
Query: 295 MLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLAR 348
M + E K++W YI+ N+L+DP N I+C+ +LR + +S + ++LA+
Sbjct: 235 MARTEIVKQLWAYIRRNNLQDPNNKRKIICNDELRLVFETDSTDMFKMNKLLAK 288
Score = 41.2 bits (95), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 38/67 (56%), Gaps = 8/67 (11%)
Query: 1 MVSDQEIAKGVETLLRQSDRNAS-------TSLNGVVKQLEAKLGLDLSHKAGFIRDQIS 53
M+SDQE+A+ VE+ +RQ+ S V +QL +LGLDL+ KA IRD I
Sbjct: 1 MLSDQELARYVESFVRQAAAVPGAVAAAGGISAESVARQLGPQLGLDLTPKAPLIRD-IL 59
Query: 54 LLLRSHP 60
L L S P
Sbjct: 60 LALFSPP 66
>gi|413925259|gb|AFW65191.1| hypothetical protein ZEAMMB73_350137 [Zea mays]
Length = 802
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 122/192 (63%), Positives = 153/192 (79%), Gaps = 5/192 (2%)
Query: 162 VGAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIIC 221
VGAKR+GGPGGLNKVCGVSPELQA+VG+PAM RTEIVKQLWAYIR+NNLQDP+NKRKIIC
Sbjct: 590 VGAKRKGGPGGLNKVCGVSPELQAIVGEPAMARTEIVKQLWAYIRRNNLQDPNNKRKIIC 649
Query: 222 DDALRVVFETDCTDMFKMNKLLAKHIIPLEPTKES---SKRFKPDAESTTEGMESGPSS- 277
+D LR+VFETD TDMF+MNKLL+KHI PLE +S +K+ KP + +E+ +
Sbjct: 650 NDELRLVFETDSTDMFQMNKLLSKHIRPLESKNDSKPEAKKLKPQGDEPISSVETDVNQL 709
Query: 278 -VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCES 336
+++S+ALA F GTG REM+ +EA KRVW++IK N LEDP N VILCD+KL++L G ES
Sbjct: 710 PLMVSDALATFFGTGEREMVHSEAVKRVWDHIKSNDLEDPENPTVILCDSKLKQLFGRES 769
Query: 337 ISALGIQEMLAR 348
++A G+ E+ R
Sbjct: 770 LTAHGVSEVAFR 781
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Query: 1 MVSDQEIAKGVETLLRQSDRNAST--SLNGVVKQLEAKLGLDLSHKAGFIRDQISLLLRS 58
M+SDQE+A+ VE+L++ + T S + VV+QL A+LG+DLS KA IR + LL
Sbjct: 366 MLSDQELAQYVESLVQHTAAQGGTGISADAVVRQLGAQLGVDLSPKAQLIRSVLVALLGP 425
Query: 59 HPTPQQVATNTQPQP 73
P T ++ P
Sbjct: 426 AAAPAPDPTGSRKDP 440
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 34/55 (61%)
Query: 295 MLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARN 349
M + E K++W YI+ N+L+DP N I+C+ +LR + +S + ++L+++
Sbjct: 620 MARTEIVKQLWAYIRRNNLQDPNNKRKIICNDELRLVFETDSTDMFQMNKLLSKH 674
>gi|116792867|gb|ABK26533.1| unknown [Picea sitchensis]
Length = 299
Score = 245 bits (625), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 146/354 (41%), Positives = 200/354 (56%), Gaps = 57/354 (16%)
Query: 1 MVSDQEIAKGVETLLRQSDRNASTSLNGVVKQLEAKLGLDLSHKAGFIRDQISLLLRSHP 60
MVSD+E+ +ETLLR D + T+ + + ++LE + G+ L K FI I+L ++ H
Sbjct: 1 MVSDEELVGRLETLLRHVDFSTITTADSIRQKLEGEFGVKLGDKEAFISHHINLYIQCH- 59
Query: 61 TPQQVATNTQPQPQPQPQQLPPKDHFTLQHHPQFSLPPQQFPPHFALHHPHPHLPQFPQE 120
P S +H+ H + PQ
Sbjct: 60 ------------------------------RPLVSA---------WVHNEHRYHPQL--- 77
Query: 121 LNFSQPQPSQAAAPPPQPHSNVSKAEAFPQISAEVAKENPPVGAKRRGGPGGLNKVCGVS 180
+ + +A H V + Q E KE+ + ++RG PGGLNK+CGVS
Sbjct: 78 ----EAKVEEAGRNEENAHMEVKE-----QNIEEPIKESTLLEGRKRGRPGGLNKICGVS 128
Query: 181 PELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMN 240
PELQA+VG+PA+PRT+IVKQLW YIR NNLQDPSNKR IIC+DALR+VF+TD TDMF+MN
Sbjct: 129 PELQAIVGEPALPRTQIVKQLWTYIRANNLQDPSNKRNIICNDALRMVFDTDSTDMFQMN 188
Query: 241 KLLAKHIIPLEPTKESSKRFKPDAESTTEGMESGPSS-VIISEALAKFLGTGGREMLQAE 299
KLLAKHI L+ + S +P+A+ T SGP+S V IS++LA FLGT E E
Sbjct: 189 KLLAKHIWALDSRDDGS---EPNAKRTANRNTSGPASPVPISDSLALFLGTDKIETSHEE 245
Query: 300 ATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNHFLR 353
KR+ +YIK N L+DPL+ I+CDAKL++L CE+ + ++LA HFL+
Sbjct: 246 VVKRLSDYIKENELQDPLDKGKIICDAKLQKLFSCENFVDFEMTKLLAP-HFLK 298
>gi|242074688|ref|XP_002447280.1| hypothetical protein SORBIDRAFT_06g031960 [Sorghum bicolor]
gi|241938463|gb|EES11608.1| hypothetical protein SORBIDRAFT_06g031960 [Sorghum bicolor]
Length = 395
Score = 244 bits (622), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 141/274 (51%), Positives = 172/274 (62%), Gaps = 28/274 (10%)
Query: 92 PQFSLPPQQFPPHFALHHPHPHLPQFPQEL---------NFSQPQPSQAAAPPPQPHSNV 142
P S PP P A + P P ++ L +F QP P PP
Sbjct: 140 PAVSAPPAV--PAMAFYPPPPLAFRYTTGLAGAATGGTVSFQQPAPGAGGTAPP------ 191
Query: 143 SKAEAFPQISAEVAKENPPVGAKR-RGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQL 201
A PQ VA +N +KR RGGPGGLNKVC +SPELQ +VG+ AM RT+IVKQL
Sbjct: 192 --TAAAPQ----VAGDNKESASKRKRGGPGGLNKVCAISPELQTIVGETAMSRTQIVKQL 245
Query: 202 WAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEPTKESSKRFK 261
WAYIR+NNLQDP +KRKIIC+D LRVVFETD TDMFKMNKLLAKHI PL+P K+ KR K
Sbjct: 246 WAYIRQNNLQDPDDKRKIICNDELRVVFETDTTDMFKMNKLLAKHITPLDP-KDQVKRMK 304
Query: 262 PDAESTTEGMESGPSSVIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMV 321
+ G SV+IS+ALAKF+GT G Q +A K +W+YIK N LED +N
Sbjct: 305 APTVAPQPGPPINQPSVVISDALAKFIGTDG-TFPQDDAQKYLWDYIKANQLEDVINES- 362
Query: 322 ILCDAKLRELLGCESISALGIQEMLARNHFLRQS 355
ILCD+KL+EL GCESI G+ EML +HF++++
Sbjct: 363 ILCDSKLQELFGCESIPMSGLSEMLG-HHFIKKT 395
>gi|125591970|gb|EAZ32320.1| hypothetical protein OsJ_16531 [Oryza sativa Japonica Group]
Length = 388
Score = 231 bits (589), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 118/216 (54%), Positives = 154/216 (71%), Gaps = 6/216 (2%)
Query: 143 SKAEAFPQISAEVAKENPPVGAKR-RGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQL 201
+ A P + + A +N +KR RGGPGGLNKVC +SPELQ +VG+ M RT+IVKQL
Sbjct: 176 TGGTASPTAAVQAAGDNKESASKRKRGGPGGLNKVCAISPELQTIVGETVMSRTQIVKQL 235
Query: 202 WAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEPTKE--SSKR 259
W YIR+NNLQDP +KRKIIC+D LRVVF TD TDMFKMNKLLAKHI PL+P + +K+
Sbjct: 236 WQYIRQNNLQDPDDKRKIICNDELRVVFGTDTTDMFKMNKLLAKHITPLDPKDQIREAKK 295
Query: 260 FKPDAESTTEGMESGPSSVIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNS 319
FKP +T SV+IS+ALAKF+G G + Q +A + +W+YIK N LED +
Sbjct: 296 FKPSNVATQPMPLINQPSVVISDALAKFIGMEG-TVPQDDALRYLWDYIKANQLEDAITG 354
Query: 320 MVILCDAKLRELLGCESISALGIQEMLARNHFLRQS 355
ILCD+KL+EL GCESI + G+ E+LA +HF++++
Sbjct: 355 S-ILCDSKLQELFGCESIPSSGLSELLA-HHFIKET 388
>gi|115461154|ref|NP_001054177.1| Os04g0665500 [Oryza sativa Japonica Group]
gi|32488657|emb|CAE03584.1| OSJNBa0087O24.7 [Oryza sativa Japonica Group]
gi|113565748|dbj|BAF16091.1| Os04g0665500 [Oryza sativa Japonica Group]
gi|116308843|emb|CAH65980.1| H1005F08.9 [Oryza sativa Indica Group]
Length = 336
Score = 231 bits (589), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 118/216 (54%), Positives = 154/216 (71%), Gaps = 6/216 (2%)
Query: 143 SKAEAFPQISAEVAKENPPVGAKR-RGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQL 201
+ A P + + A +N +KR RGGPGGLNKVC +SPELQ +VG+ M RT+IVKQL
Sbjct: 124 TGGTASPTAAVQAAGDNKESASKRKRGGPGGLNKVCAISPELQTIVGETVMSRTQIVKQL 183
Query: 202 WAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEPTKE--SSKR 259
W YIR+NNLQDP +KRKIIC+D LRVVF TD TDMFKMNKLLAKHI PL+P + +K+
Sbjct: 184 WQYIRQNNLQDPDDKRKIICNDELRVVFGTDTTDMFKMNKLLAKHITPLDPKDQIREAKK 243
Query: 260 FKPDAESTTEGMESGPSSVIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNS 319
FKP +T SV+IS+ALAKF+G G + Q +A + +W+YIK N LED +
Sbjct: 244 FKPSNVATQPMPLINQPSVVISDALAKFIGMEG-TVPQDDALRYLWDYIKANQLEDAITG 302
Query: 320 MVILCDAKLRELLGCESISALGIQEMLARNHFLRQS 355
ILCD+KL+EL GCESI + G+ E+LA +HF++++
Sbjct: 303 S-ILCDSKLQELFGCESIPSSGLSELLA-HHFIKET 336
>gi|359359030|gb|AEV40937.1| SWIB/MDM2 domain-containing protein [Oryza punctata]
Length = 391
Score = 231 bits (588), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 121/238 (50%), Positives = 160/238 (67%), Gaps = 19/238 (7%)
Query: 121 LNFSQPQPSQAAAPPPQPHSNVSKAEAFPQISAEVAKENPPVGAKR-RGGPGGLNKVCGV 179
++F QP P + A P + + A +N +KR RGGPGGLNKVC +
Sbjct: 170 VSFQQPAPG-------------TGGTASPTAAVQAAGDNKESASKRKRGGPGGLNKVCAI 216
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
SPELQ +VG+ M RT+IVKQLW YIR+NNLQDP +KRKIIC+D LRVVF TD TDMFKM
Sbjct: 217 SPELQTIVGETVMSRTQIVKQLWQYIRQNNLQDPDDKRKIICNDELRVVFGTDTTDMFKM 276
Query: 240 NKLLAKHIIPLEPTKE--SSKRFKPDAESTTEGMESGPSSVIISEALAKFLGTGGREMLQ 297
NKLLAKHI PL+P + +K++KP +T SV+IS+ALAKF+G G + Q
Sbjct: 277 NKLLAKHITPLDPKDQIREAKKYKPSDVATQPTPPINQPSVVISDALAKFIGMEG-TVPQ 335
Query: 298 AEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNHFLRQS 355
+A + +W+YIK N LED + ILCD+KL+EL GCESI + G+ E+LA +HF++++
Sbjct: 336 DDALRYLWDYIKANQLEDVITGS-ILCDSKLQELFGCESIPSSGLSELLA-HHFIKET 391
>gi|414584929|tpg|DAA35500.1| TPA: hypothetical protein ZEAMMB73_283156 [Zea mays]
Length = 387
Score = 230 bits (587), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 160/238 (67%), Gaps = 20/238 (8%)
Query: 121 LNFSQPQPSQAAAPPPQPHSNVSKAEAFPQISAEVAKENPPVGAKR-RGGPGGLNKVCGV 179
++F QP P + A P + +VA +N +KR RGGPGGLNK+C +
Sbjct: 167 VSFQQPTPG-------------AGGTASPTAAPQVAGDNKESASKRKRGGPGGLNKICAI 213
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
SPELQ +VG+ AM RT+IVKQLWAYIR+NNLQDP +KRKIIC+D LRVVFETD TDMFKM
Sbjct: 214 SPELQTIVGETAMSRTQIVKQLWAYIRQNNLQDPDDKRKIICNDELRVVFETDTTDMFKM 273
Query: 240 NKLLAKHIIPLEPTKE--SSKRFKPDAESTTEGMESGPSSVIISEALAKFLGTGGREMLQ 297
NKLLAKHI PL+P + KR K + P SV+IS+ALAKF+GT G Q
Sbjct: 274 NKLLAKHITPLDPKDQLHEVKRMKAPTVVPQPPPINQP-SVVISDALAKFIGTDG-TFPQ 331
Query: 298 AEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNHFLRQS 355
+A K +W+YIK N LED + S ILCD+KL+EL GCESI G+ EML +HF++++
Sbjct: 332 DDALKYLWDYIKANQLEDVI-SGSILCDSKLQELFGCESIPMSGLSEMLG-HHFIKKT 387
>gi|359359081|gb|AEV40987.1| SWIB/MDM2 domain-containing protein [Oryza minuta]
Length = 389
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 121/238 (50%), Positives = 160/238 (67%), Gaps = 19/238 (7%)
Query: 121 LNFSQPQPSQAAAPPPQPHSNVSKAEAFPQISAEVAKENPPVGAKR-RGGPGGLNKVCGV 179
++F QP P + A P + + A +N +KR RGGPGGLNKVC +
Sbjct: 168 VSFQQPAPG-------------TGGTASPTAAVQAAGDNKESASKRKRGGPGGLNKVCAI 214
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
SPELQ +VG+ M RT+IVKQLW YIR+NNLQDP +KRKIIC+D LRVVF TD TDMFKM
Sbjct: 215 SPELQTIVGETVMSRTQIVKQLWQYIRQNNLQDPDDKRKIICNDELRVVFGTDTTDMFKM 274
Query: 240 NKLLAKHIIPLEPTKE--SSKRFKPDAESTTEGMESGPSSVIISEALAKFLGTGGREMLQ 297
NKLLAKHI PL+P + +K++KP +T SV+IS+ALAKF+G G + Q
Sbjct: 275 NKLLAKHITPLDPKDQIREAKKYKPSDVATQPMPPINQPSVVISDALAKFIGMEG-TVPQ 333
Query: 298 AEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNHFLRQS 355
+A + +W+YIK N LED + ILCD+KL+EL GCESI + G+ E+LA +HF++++
Sbjct: 334 DDALRYLWDYIKANQLEDVIAGS-ILCDSKLQELFGCESIPSSGLSELLA-HHFIKET 389
>gi|218195772|gb|EEC78199.1| hypothetical protein OsI_17819 [Oryza sativa Indica Group]
Length = 389
Score = 227 bits (578), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 112/193 (58%), Positives = 145/193 (75%), Gaps = 5/193 (2%)
Query: 165 KRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDA 224
++RGGPGGLNKVC +SPELQ +VG+ M RT+IVKQLW YIR+NNLQDP +KRKIIC+D
Sbjct: 200 RKRGGPGGLNKVCAISPELQTIVGETVMSRTQIVKQLWQYIRQNNLQDPDDKRKIICNDE 259
Query: 225 LRVVFETDCTDMFKMNKLLAKHIIPLEPTKE--SSKRFKPDAESTTEGMESGPSSVIISE 282
LRVVF TD TDMFKMNKLLAKHI PL+P + +K+FKP +T SV+IS+
Sbjct: 260 LRVVFGTDTTDMFKMNKLLAKHITPLDPKDQIREAKKFKPSNVATQPMPLINQPSVVISD 319
Query: 283 ALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGI 342
ALAKF+G G + Q +A + +W+YIK N LED + ILCD+KL+EL GCESI + G+
Sbjct: 320 ALAKFIGMEG-TVPQDDALRYLWDYIKANQLEDAITGS-ILCDSKLQELFGCESIPSSGL 377
Query: 343 QEMLARNHFLRQS 355
E+LA +HF++++
Sbjct: 378 SELLA-HHFIKET 389
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/57 (59%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 1 MVSDQEIAKGVETLLRQSDRNAS-TSLNGVVKQLEAKLGLDLSHKAGFIRDQISLLL 56
MVSDQEIA VE++LR S A SL V+ Q EAKLG+DL+HKA FIRDQ+ L
Sbjct: 1 MVSDQEIASCVESVLRSSGGAAGEASLAAVLSQAEAKLGVDLAHKATFIRDQMDLFF 57
>gi|302795450|ref|XP_002979488.1| hypothetical protein SELMODRAFT_419232 [Selaginella moellendorffii]
gi|300152736|gb|EFJ19377.1| hypothetical protein SELMODRAFT_419232 [Selaginella moellendorffii]
Length = 320
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 130/360 (36%), Positives = 193/360 (53%), Gaps = 61/360 (16%)
Query: 1 MVSDQEIAKGVETLLRQSDRNASTSLNGVVKQLEAKLGLDLSHKAGFIRDQISLLLRSHP 60
+V+D +I + + +L +D ++TS++ + LE LG++L+HK FIR Q+ L +
Sbjct: 17 LVADSDIVREIGLVLNSADL-STTSMSDIRAVLEKNLGVELAHKKDFIRQQVDEFLAHNT 75
Query: 61 TPQQVATNTQPQPQPQPQQLPPKDHFTLQHHPQFSLPPQQFPPHFALHHPHPHLPQFPQE 120
+ + + P Q Q + SLP Q L QF +
Sbjct: 76 SLGSLVKGDEEANATAPAQEEQ------QGTAEDSLPNDQ------------ELEQFREN 117
Query: 121 LNFSQPQPSQAAAPPPQPHSNVSKAEAFPQISAEVAKENPPVGAKRRGGPGGLNKVCGVS 180
+ + +++ P K+RGG LNK+C +S
Sbjct: 118 IELA-------------------------------IEDSTPKEKKKRGG---LNKLCRLS 143
Query: 181 PELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMN 240
PELQA++G+ ++PRT++VKQLW YIR +NLQDP NKR IICDD LR +F TD TDMF+MN
Sbjct: 144 PELQAIIGEESLPRTQVVKQLWVYIRAHNLQDPENKRNIICDDPLRELFGTDQTDMFQMN 203
Query: 241 KLLAKHI--IPLEPTKESSKRFKPDAESTTEGMESG---PSSVIISEALAKFLGTGGREM 295
KLL+KHI I E ++S + K + + +G SG PS IS+AL KF GTG E+
Sbjct: 204 KLLSKHIWTITEEGAEDSEPKTKRQKKDSGKGKASGFLVPSP--ISDALQKFFGTGESEV 261
Query: 296 LQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNHFLRQS 355
++E KR+W+YI+ N L+DP + ILCD KL+EL C+S + ++LA +HF+ S
Sbjct: 262 TRSEVVKRIWDYIRSNQLQDPTDKKKILCDNKLQELFECDSFLGFTMPKLLA-SHFVTSS 320
>gi|356496860|ref|XP_003517283.1| PREDICTED: upstream activation factor subunit spp27-like isoform 2
[Glycine max]
Length = 331
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 128/373 (34%), Positives = 190/373 (50%), Gaps = 65/373 (17%)
Query: 1 MVSDQEIAKGVETLLRQSDRNASTSLNGVVKQLEAKLGLDLSHKAGFIRDQISLLLRSHP 60
MVS+ E+ + LR SD N +T+ V +QLEA G+DLS + FIR+Q+ L L++
Sbjct: 1 MVSESELIGRLREFLRSSDLNTTTTAT-VRRQLEADFGIDLSDRKAFIREQVDLFLQTEH 59
Query: 61 TPQQVATNTQPQPQPQPQQLPPKDHFTLQHHPQFSLPPQQFPPHFALHHPHPHLPQFPQE 120
QPQ ++ D + P P+
Sbjct: 60 N------------QPQQEERQNDD----------------------VEEQEEDAPNNPE- 84
Query: 121 LNFSQPQPSQAAAPPPQPHSNVSKAEAFPQISAEVAKENPP-VGAKRRGGPGGLNKVCGV 179
Q QPS + + + + Q A+ AK+N + K+RGG G K+C +
Sbjct: 85 ----QSQPSDSKEETDEEEEGEEEEDKPEQ--AKNAKKNKGRLVVKKRGG--GFCKLCSL 136
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
SP+LQ + P M RTE+VKQLW YIR+ NLQDP+N+R IICD+ LR +F + +MF+M
Sbjct: 137 SPQLQEFMEAPEMARTEVVKQLWVYIREKNLQDPNNRRNIICDERLRSLFNVNSINMFQM 196
Query: 240 NKLLAKHIIPLEPT---------KESSKRFKPDAESTTEGME------SGPSSVI----I 280
NK L+KHI PLE KE K+ + D +S + G S + +
Sbjct: 197 NKALSKHIWPLESDDVVQVKSTPKEKQKKQERDDDSDEAKKKEKRQKGGGKSGFLAPLQL 256
Query: 281 SEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISAL 340
S+AL FLGTG E+ + + KR+W+YIK N+L+DP + I+CD KL+EL +S +
Sbjct: 257 SDALVNFLGTGESELARTDVIKRMWDYIKGNNLQDPSDKRKIICDEKLKELFDVDSFTGF 316
Query: 341 GIQEMLARNHFLR 353
+ ++LA HF++
Sbjct: 317 TVTKLLA-PHFIK 328
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 46/65 (70%)
Query: 187 VGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKH 246
G+ + RT+++K++W YI+ NNLQDPS+KRKIICD+ L+ +F+ D F + KLLA H
Sbjct: 266 TGESELARTDVIKRMWDYIKGNNLQDPSDKRKIICDEKLKELFDVDSFTGFTVTKLLAPH 325
Query: 247 IIPLE 251
I E
Sbjct: 326 FIKTE 330
>gi|302792146|ref|XP_002977839.1| hypothetical protein SELMODRAFT_176439 [Selaginella moellendorffii]
gi|300154542|gb|EFJ21177.1| hypothetical protein SELMODRAFT_176439 [Selaginella moellendorffii]
Length = 342
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 131/385 (34%), Positives = 194/385 (50%), Gaps = 89/385 (23%)
Query: 1 MVSDQEIAKGVETLLRQSDRNASTSLNGVVKQLEAKLGLDLSHKAGFIRDQISLLLRSHP 60
+V+D +I + + +L +D ++TS++ + LE LG++L+HK FIR Q+ L +
Sbjct: 17 LVADSDIVREIGLVLNSADL-STTSMSDIRAVLEKNLGVELAHKKDFIRQQVDEFLAHNT 75
Query: 61 TPQQVATNTQPQPQPQPQQLPPKDHFTLQHHPQFSLPPQQFPPHFALHHPHPHLPQFPQE 120
+ + + P Q Q + SLP Q L QF +
Sbjct: 76 SLGSLVKGDEEANATAPAQEEQ------QGTAEDSLPNDQ------------ELEQFREN 117
Query: 121 LNFSQPQPSQAAAPPPQPHSNVSKAEAFPQISAEVAKENPPVGAKRRGGPGGLNKVCGVS 180
+ + +++ P K+RGG LNK+C +S
Sbjct: 118 IELA-------------------------------IEDSTPKEKKKRGG---LNKLCRLS 143
Query: 181 PELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMN 240
PELQA++G+ ++PRT++VKQLW YIR +NLQDP NKR IICDD LR +F TD TDMF+MN
Sbjct: 144 PELQAIIGEESLPRTQVVKQLWVYIRAHNLQDPENKRNIICDDPLRELFGTDQTDMFQMN 203
Query: 241 KLLAKHIIPL---------------------------EPTKESSKRFKPDAESTTEGMES 273
KLL+KHI + E ++ +KR K D + +G S
Sbjct: 204 KLLSKHIWTITEEGECFGFCASQNGDHKDCFLDCAGAEDSEPKTKRQKKD---SGKGKAS 260
Query: 274 G---PSSVIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRE 330
G PS IS+AL KF GTG E+ ++E KR+W+YI+ N L+DP + ILCD KL+E
Sbjct: 261 GFLVPSP--ISDALQKFFGTGESEVTRSEVVKRIWDYIRSNQLQDPTDKKKILCDNKLQE 318
Query: 331 LLGCESISALGIQEMLARNHFLRQS 355
L C+S + ++LA +HF+ S
Sbjct: 319 LFECDSFLGFTMPKLLA-SHFVTSS 342
>gi|356496858|ref|XP_003517282.1| PREDICTED: upstream activation factor subunit spp27-like isoform 1
[Glycine max]
Length = 337
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 129/373 (34%), Positives = 189/373 (50%), Gaps = 59/373 (15%)
Query: 1 MVSDQEIAKGVETLLRQSDRNASTSLNGVVKQLEAKLGLDLSHKAGFIRDQISLLLRS-H 59
MVS+ E+ + LR SD N +T+ V +QLEA G+DLS + FIR+Q+ L L++ H
Sbjct: 1 MVSESELIGRLREFLRSSDLNTTTTAT-VRRQLEADFGIDLSDRKAFIREQVDLFLQTEH 59
Query: 60 PTPQQVATNTQPQPQPQPQQLPPKDHFTLQHHPQFSLPPQQFPPHFALHHPHPHLPQFPQ 119
PQQ + Q + P ++P+ S P + Q
Sbjct: 60 NQPQQ-EERQNDDVEEQEEDAP--------NNPEQSQPSDSKEETDEEEEGEEEEDKPEQ 110
Query: 120 ELNFSQPQPSQAAAPPPQPHSNVSKAEAFPQISAEVAKENPPVGAKRRGGPGGLNKVCGV 179
N A + SN ++ EV K +RGG G K+C +
Sbjct: 111 AKN----------AKKNKGRSN--------KLGDEVVK--------KRGG--GFCKLCSL 142
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
SP+LQ + P M RTE+VKQLW YIR+ NLQDP+N+R IICD+ LR +F + +MF+M
Sbjct: 143 SPQLQEFMEAPEMARTEVVKQLWVYIREKNLQDPNNRRNIICDERLRSLFNVNSINMFQM 202
Query: 240 NKLLAKHIIPLEPT---------KESSKRFKPDAESTTEGME------SGPSSVI----I 280
NK L+KHI PLE KE K+ + D +S + G S + +
Sbjct: 203 NKALSKHIWPLESDDVVQVKSTPKEKQKKQERDDDSDEAKKKEKRQKGGGKSGFLAPLQL 262
Query: 281 SEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISAL 340
S+AL FLGTG E+ + + KR+W+YIK N+L+DP + I+CD KL+EL +S +
Sbjct: 263 SDALVNFLGTGESELARTDVIKRMWDYIKGNNLQDPSDKRKIICDEKLKELFDVDSFTGF 322
Query: 341 GIQEMLARNHFLR 353
+ ++LA HF++
Sbjct: 323 TVTKLLA-PHFIK 334
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 46/65 (70%)
Query: 187 VGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKH 246
G+ + RT+++K++W YI+ NNLQDPS+KRKIICD+ L+ +F+ D F + KLLA H
Sbjct: 272 TGESELARTDVIKRMWDYIKGNNLQDPSDKRKIICDEKLKELFDVDSFTGFTVTKLLAPH 331
Query: 247 IIPLE 251
I E
Sbjct: 332 FIKTE 336
>gi|343172024|gb|AEL98716.1| SWIB complex BAF60b domain-containing protein, partial [Silene
latifolia]
Length = 235
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 94/155 (60%), Positives = 114/155 (73%), Gaps = 3/155 (1%)
Query: 165 KRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDA 224
KRRGG GGLNK+CGV+P+LQA+VGQP MPRTEIVKQLWAYIRK+NLQDPSNKRKIIC++
Sbjct: 81 KRRGGSGGLNKLCGVTPQLQAIVGQPTMPRTEIVKQLWAYIRKHNLQDPSNKRKIICNEE 140
Query: 225 LRVVFETDCTDMFKMNKLLAKHIIPLEPTKESSKRF-KPDAESTTEGMESGPSSVIISEA 283
LR+VFE DCTDMF+MNKLLAKHI+ L+PTK+S ++ KP E + SV+ +EA
Sbjct: 141 LRLVFEVDCTDMFQMNKLLAKHILRLDPTKDSGQQSKKPKVEESQVPSSQAAPSVVKTEA 200
Query: 284 LAKFLGTGGREMLQAEATK--RVWEYIKVNHLEDP 316
LA GT + Q+ K V E +KV E P
Sbjct: 201 LANTFGTSETKTPQSNVYKCIEVPEKVKVEECEAP 235
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 295 MLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNHFLR 353
M + E K++W YI+ ++L+DP N I+C+ +LR + + + ++LA+ H LR
Sbjct: 108 MPRTEIVKQLWAYIRKHNLQDPSNKRKIICNEELRLVFEVDCTDMFQMNKLLAK-HILR 165
>gi|449533967|ref|XP_004173941.1| PREDICTED: uncharacterized protein LOC101232239, partial [Cucumis
sativus]
Length = 211
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 84/96 (87%), Positives = 89/96 (92%)
Query: 158 ENPPVGAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKR 217
EN KRRGGPGGLNK+CGVSPELQA+VGQP +PRTEIVKQLWAYIRKNNLQDPSNKR
Sbjct: 116 ENTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKR 175
Query: 218 KIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEPT 253
KIIC+D LR+VFETDCTDMFKMNKLLAKHIIPLEPT
Sbjct: 176 KIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPT 211
Score = 44.3 bits (103), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 34/59 (57%)
Query: 290 TGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLAR 348
G E+ + E K++W YI+ N+L+DP N I+C+ +LR + + + ++LA+
Sbjct: 145 VGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAK 203
>gi|343172022|gb|AEL98715.1| SWIB complex BAF60b domain-containing protein, partial [Silene
latifolia]
Length = 235
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 93/155 (60%), Positives = 113/155 (72%), Gaps = 3/155 (1%)
Query: 165 KRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDA 224
KRRGG GGLNK+CGV+P+LQA+VGQP MPRTEIVKQLWAYIRK+NLQDPSNKRKIIC++
Sbjct: 81 KRRGGSGGLNKLCGVTPQLQAIVGQPTMPRTEIVKQLWAYIRKHNLQDPSNKRKIICNEE 140
Query: 225 LRVVFETDCTDMFKMNKLLAKHIIPLEPTKESSKRF-KPDAESTTEGMESGPSSVIISEA 283
LR+VFE DCTDMF+MNKLLAKHI+ L+PTK+S ++ KP E + SV+ +EA
Sbjct: 141 LRLVFEVDCTDMFQMNKLLAKHILRLDPTKDSGQQSKKPKVEESQVPSSQAAPSVVKTEA 200
Query: 284 LAKFLGTGGREMLQAEATK--RVWEYIKVNHLEDP 316
A GT + Q+ K V E +KV E P
Sbjct: 201 PANTFGTSETKTPQSNVYKCIEVPEKVKVEECEAP 235
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 295 MLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNHFLR 353
M + E K++W YI+ ++L+DP N I+C+ +LR + + + ++LA+ H LR
Sbjct: 108 MPRTEIVKQLWAYIRKHNLQDPSNKRKIICNEELRLVFEVDCTDMFQMNKLLAK-HILR 165
>gi|168029051|ref|XP_001767040.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681782|gb|EDQ68206.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 380
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 129/373 (34%), Positives = 190/373 (50%), Gaps = 43/373 (11%)
Query: 1 MVSDQEIAKGVETLLRQSDRNASTSLNGVVKQLEAKLGLDLSHKAGFIRDQISLLLRSHP 60
MVSD EI + + +L+ +D N +T+ + +QL+ LG+DL+ K FIR
Sbjct: 27 MVSDAEIVRHLTEVLKNADLNTTTT-TAIRQQLQIALGVDLTDKKAFIR----------- 74
Query: 61 TPQQVATNTQPQPQPQPQQLPPKDHFTLQHHPQFSLPPQQFPPHFALHHPHPHLPQFPQE 120
QQV Q Q Q P+ + + +E
Sbjct: 75 --QQVDAYLQKQWQEAEAVAEPE----VGAEDGGEGDGEGEGEGEEDEGSEKTGGGEDEE 128
Query: 121 LNF-SQPQPSQAAAPPPQPHSNVSKAEAFPQISAEVAKENPPVGAKRRGGPGGLNKVCGV 179
L+ + S+ + +P S +A+ I A + KE G L K C +
Sbjct: 129 LDVDGDTKASKGSKACVEPDSKRMRAKIDRAIKASLTKEKKKRTGGGGG----LTKACTL 184
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
SPELQ ++G+ +PRT++VKQLWAYIR++NLQDP +KRKIICDDALR + T+ TDMFKM
Sbjct: 185 SPELQTIIGESELPRTQVVKQLWAYIREHNLQDPEDKRKIICDDALRNLLGTNSTDMFKM 244
Query: 240 NKLLAKHIIPLEP--TKESSKRF-----------KPDAESTTE--GMESGPSSVI----I 280
NKLL++HI PL+ T+ ++K KP + T G +S + I
Sbjct: 245 NKLLSRHIWPLDNGVTEAAAKVRDRDTDTDDVEPKPKKQKTVSSGGGKSKTQGFLAPYPI 304
Query: 281 SEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISAL 340
S+ LAKFL ++ +AEA KR+W YIK ++L+DP N ILCD L++LL C+
Sbjct: 305 SDQLAKFLDVEDGKVSRAEAAKRMWAYIKDHNLQDPTNKKKILCDQPLQDLLDCDHFVGF 364
Query: 341 GIQEMLARNHFLR 353
+ ++L R HF++
Sbjct: 365 DLSKLLKR-HFIK 376
>gi|255561659|ref|XP_002521839.1| brg-1 associated factor, putative [Ricinus communis]
gi|223538877|gb|EEF40475.1| brg-1 associated factor, putative [Ricinus communis]
Length = 614
Score = 177 bits (449), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 87/206 (42%), Positives = 129/206 (62%), Gaps = 19/206 (9%)
Query: 164 AKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDD 223
K+RGG G K+C +SP+LQ G+ + RTE+VK+LW YIR+NNLQDP NKR I+CD+
Sbjct: 409 VKKRGG--GFTKLCSLSPQLQEFTGESELARTEVVKKLWIYIRENNLQDPKNKRNILCDE 466
Query: 224 ALRVVFETDCTDMFKMNKLLAKHIIPL-----EPTKESSKRFKPDAESTTE-------GM 271
+LR +F DC +MF+MNK+L+KHI PL E + + +R K E ++
Sbjct: 467 SLRTLFRVDCINMFQMNKVLSKHIWPLDEEDAENSLQKERRSKQQREEDSDEPKQKEKRQ 526
Query: 272 ESGPSSVII----SEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAK 327
+ G S +++ S+ L KF+GTG E+ +A+ KR+W YIK N L+DP + ILCD K
Sbjct: 527 KKGVSGLLVPLPLSDPLVKFIGTGENELSRADVVKRIWGYIKQNDLQDPSDKRRILCDDK 586
Query: 328 LRELLGCESISALGIQEMLARNHFLR 353
L+EL +S + + ++L HF++
Sbjct: 587 LKELFEVDSFNGFSVSKLLT-AHFIK 611
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 118/233 (50%), Gaps = 52/233 (22%)
Query: 164 AKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDD 223
K+RGG G K+C +SP+LQ +G+ RTE+VK+LW YIR+NNLQDP N+R I+CD+
Sbjct: 260 VKKRGG--GFTKLCSLSPQLQEFIGESKSARTEVVKKLWVYIRENNLQDPKNRRIILCDE 317
Query: 224 ALRVVFETDCTDMFKMNKLLAKHIIPLEPTKESSKRFKP--------------------- 262
+LR +F D +MF+MNK+L+KHI PL +E +
Sbjct: 318 SLRALFRVDSINMFQMNKVLSKHIWPLNEEEEGNDSVSEASNGSGKEGEDEEEKSEEDEE 377
Query: 263 ---------------DAESTTEGMESGPSSVI------------ISEALAKFLGTGGREM 295
D+E + +G + + +S L +F TG E+
Sbjct: 378 EEEGDKEEEEAVEKEDSERSKKGGATKVDKDVKKRGGGFTKLCSLSPQLQEF--TGESEL 435
Query: 296 LQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLAR 348
+ E K++W YI+ N+L+DP N ILCD LR L + I+ + ++L++
Sbjct: 436 ARTEVVKKLWIYIRENNLQDPKNKRNILCDESLRTLFRVDCINMFQMNKVLSK 488
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/232 (34%), Positives = 121/232 (52%), Gaps = 51/232 (21%)
Query: 164 AKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDD 223
AK+RGG G +C +SP+L VG + RTE+VK+LWAYIR+N+LQDP N+R I CD+
Sbjct: 112 AKKRGG--GFTMLCSLSPQLHKFVGVSELARTEVVKKLWAYIRENDLQDPKNRRIIKCDE 169
Query: 224 ALRVVFETDCTDMFKMNKLLAKHIIPLEPTKESS----KRFKPDAESTTEG--------- 270
ALR +F + +MF+MNK L+KHI PL E+S K + + S +EG
Sbjct: 170 ALRDLFRVNSINMFQMNKALSKHIWPLTAQAEASNDPGKEEEDEEGSVSEGSNDPSKEEE 229
Query: 271 ------------------MESGPSSVI----------------ISEALAKFLGTGGREML 296
+ G ++ + +S L +F+G +
Sbjct: 230 DEEEKMEEDEEEEEDNKRSKKGRATKVNKDVKKRGGGFTKLCSLSPQLQEFIGES--KSA 287
Query: 297 QAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLAR 348
+ E K++W YI+ N+L+DP N +ILCD LR L +SI+ + ++L++
Sbjct: 288 RTEVVKKLWVYIRENNLQDPKNRRIILCDESLRALFRVDSINMFQMNKVLSK 339
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 48/65 (73%)
Query: 187 VGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKH 246
G+ + R ++VK++W YI++N+LQDPS+KR+I+CDD L+ +FE D + F ++KLL H
Sbjct: 549 TGENELSRADVVKRIWGYIKQNDLQDPSDKRRILCDDKLKELFEVDSFNGFSVSKLLTAH 608
Query: 247 IIPLE 251
I +E
Sbjct: 609 FIKME 613
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 1 MVSDQEIAKGVETLLRQSDRNASTSLNGVVKQLEAKLGLDLSHKAGFIRDQISLLLRS 58
MVSD ++ + +L+ SD N +T+ V ++LE G+DLS + FIR+QI L +
Sbjct: 1 MVSDSDLVTRLREILQDSDLNTATA-GSVRRKLEEVFGVDLSDRKAFIREQIDSYLET 57
>gi|168032290|ref|XP_001768652.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680151|gb|EDQ66590.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 308
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 87/197 (44%), Positives = 125/197 (63%), Gaps = 20/197 (10%)
Query: 176 VCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTD 235
VC +SP LQA++G+ +PRT++VKQLWAYIR++NLQDP +KRKIIC+DALR + T+ TD
Sbjct: 109 VCALSPLLQAIIGEAELPRTQVVKQLWAYIREHNLQDPDDKRKIICNDALRNLLGTNSTD 168
Query: 236 MFKMNKLLAKHIIPLEPTKESSKRFKPDAESTTEGME------------SGPSSVI---- 279
MFKMNKLL+KHI PL+ + D ++ TE E G ++
Sbjct: 169 MFKMNKLLSKHIFPLDNRSTGAAAKGRDRDTDTEDAEPKAKKQKADKSGGGKGKIVGFLA 228
Query: 280 ---ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCES 336
ISE LAKFL ++ +A+A KR+W YIK N+L+DP N +I+CD +L++L C+
Sbjct: 229 PCPISEQLAKFLDAEDGKVSRADAVKRLWIYIKENNLQDPSNKKMIVCDEQLQDLFDCDH 288
Query: 337 ISALGIQEMLARNHFLR 353
+ ++L R HF++
Sbjct: 289 FVGFDLTKLLTR-HFIK 304
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 52/89 (58%), Gaps = 5/89 (5%)
Query: 165 KRRGGPG---GLNKVCGVSPELQAVVG--QPAMPRTEIVKQLWAYIRKNNLQDPSNKRKI 219
K GG G G C +S +L + + R + VK+LW YI++NNLQDPSNK+ I
Sbjct: 215 KSGGGKGKIVGFLAPCPISEQLAKFLDAEDGKVSRADAVKRLWIYIKENNLQDPSNKKMI 274
Query: 220 ICDDALRVVFETDCTDMFKMNKLLAKHII 248
+CD+ L+ +F+ D F + KLL +H I
Sbjct: 275 VCDEQLQDLFDCDHFVGFDLTKLLTRHFI 303
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 1 MVSDQEIAKGVETLLRQSDRNASTSLNGVVKQLEAKLGLDLSHKAGFIRDQISLLLR 57
MVSD EI + + +L+++D N +T+ + +QL++ LG+DLS K FIR Q+ L L+
Sbjct: 1 MVSDAEIVRHLTAVLKKADLNTTTTTE-IRQQLQSDLGVDLSDKKAFIRQQVDLYLQ 56
>gi|356537694|ref|XP_003537360.1| PREDICTED: uncharacterized protein LOC100786835 [Glycine max]
Length = 346
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 89/209 (42%), Positives = 131/209 (62%), Gaps = 22/209 (10%)
Query: 164 AKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDD 223
K+RGG G K+C +SP+LQ +G P M RTE+VKQLWAYIR+ NLQDP+N+R IICD+
Sbjct: 138 VKKRGG--GFCKLCSLSPQLQEFMGAPEMARTEVVKQLWAYIREKNLQDPNNRRNIICDE 195
Query: 224 ALRVVFETDCTDMFKMNKLLAKHIIPLEPT---------KESSKRFKPDAEST------- 267
LR +F + +MF+MNK L+KHI PL+ KE K+ + D +S
Sbjct: 196 RLRSLFNVNSINMFQMNKALSKHIWPLDSDDVVQVKSTPKEKQKKQERDDDSDEPKKKEK 255
Query: 268 --TEGMESGPSS-VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILC 324
G +SG + + +S+AL FLGTG E+ + + KR+W+YIK N+L+DP + I+C
Sbjct: 256 RQKGGGKSGFLAPLQLSDALVNFLGTGESELARTDVIKRMWDYIKGNNLQDPSDKRKIIC 315
Query: 325 DAKLRELLGCESISALGIQEMLARNHFLR 353
D KL+EL ++ + + ++LA HF++
Sbjct: 316 DEKLKELFDVDTFTGFTVTKLLA-PHFIK 343
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 46/65 (70%)
Query: 187 VGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKH 246
G+ + RT+++K++W YI+ NNLQDPS+KRKIICD+ L+ +F+ D F + KLLA H
Sbjct: 281 TGESELARTDVIKRMWDYIKGNNLQDPSDKRKIICDEKLKELFDVDTFTGFTVTKLLAPH 340
Query: 247 IIPLE 251
I E
Sbjct: 341 FIKTE 345
>gi|255562647|ref|XP_002522329.1| Upstream activation factor subunit UAF30, putative [Ricinus
communis]
gi|223538407|gb|EEF40013.1| Upstream activation factor subunit UAF30, putative [Ricinus
communis]
Length = 322
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 84/208 (40%), Positives = 127/208 (61%), Gaps = 21/208 (10%)
Query: 164 AKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDD 223
K+RGG G +K+C +SP+LQ + G P + RTE+VKQLW++IR+ LQDP+N+R IICD+
Sbjct: 117 GKKRGG--GFSKLCSLSPQLQELTGVPQLARTEVVKQLWSHIREKKLQDPNNRRNIICDE 174
Query: 224 ALRVVFETDCTDMFKMNKLLAKHIIPL-------------EPTKESSKRFKPDAESTTEG 270
R +F D DMF+MNK+L+KHI PL E ++ + +PD E
Sbjct: 175 PFRALFGVDSIDMFQMNKVLSKHIWPLDSDGVVPAKSEPKEKQRKQEREEEPDEPKRKEK 234
Query: 271 MESGPSS-----VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCD 325
G S + +S+AL KF GTG + +A+ KR+WEYIK N+L+DP + I+CD
Sbjct: 235 RRKGEKSGFLAPLQLSDALIKFFGTGENALSRADVIKRMWEYIKQNNLQDPSDKRRIICD 294
Query: 326 AKLRELLGCESISALGIQEMLARNHFLR 353
KL+EL ++ + + ++L+ HF++
Sbjct: 295 EKLKELFDVDTFNGFTVTKLLS-AHFVK 321
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Query: 1 MVSDQEIAKGVETLLRQSDRNASTSLNGVVK-QLEAKLGLDLSHKAGFIRDQISLLLRSH 59
MVSD E+ + + L+ SD N +T+ G+V+ QLE G+DLS K FIR+Q+ L L+S
Sbjct: 1 MVSDSELIERLREFLKNSDLNTTTT--GIVRRQLEEDFGIDLSDKKAFIREQVDLFLQSQ 58
>gi|357114420|ref|XP_003558998.1| PREDICTED: upstream activation factor subunit spp27-like isoform 2
[Brachypodium distachyon]
Length = 328
Score = 167 bits (423), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 84/199 (42%), Positives = 124/199 (62%), Gaps = 17/199 (8%)
Query: 164 AKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDD 223
KR+GG G K+C +SP LQ VG + RTE+VK+LWAYIR+NNLQDPSNKRKI+CD+
Sbjct: 125 GKRKGG--GFTKLCSISPTLQEFVGASELARTEVVKKLWAYIRENNLQDPSNKRKILCDE 182
Query: 224 ALRVVFETDCTDMFKMNKLLAKHIIPLEPT-----KESSKRFKPDAESTTEGME-----S 273
L+ +F+ + DMF+MNK L KHI PL K+S+ + KP EG + S
Sbjct: 183 TLKKLFKVNSIDMFQMNKALTKHIWPLNSEGPASPKKSTPKEKPQKREKNEGKKQKVGSS 242
Query: 274 GPSSVI-----ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKL 328
P + + +S+ LA F+GTG + +++ K +W+YIK N+L+DP + I+CD KL
Sbjct: 243 RPGTGLNAPLQLSDDLANFIGTGESMLSRSDVVKIMWDYIKENNLQDPSDRRKIICDEKL 302
Query: 329 RELLGCESISALGIQEMLA 347
+ L +S + + ++L+
Sbjct: 303 KNLFQVDSFTGFTVSKLLS 321
Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 1 MVSDQEIAKGVETLLRQSDRNASTSLNGVVKQLEAKLGLDLSHKAGFIRDQISLLL 56
MVSD E+ + + +L+ SD +T+ + ++LE G+DLS K F+R+Q+ +LL
Sbjct: 1 MVSDSELVERLREVLKDSDLTTTTT-GALRRRLEEDFGVDLSDKKAFVREQVDILL 55
>gi|357114418|ref|XP_003558997.1| PREDICTED: upstream activation factor subunit spp27-like isoform 1
[Brachypodium distachyon]
Length = 334
Score = 167 bits (423), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 84/199 (42%), Positives = 124/199 (62%), Gaps = 17/199 (8%)
Query: 164 AKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDD 223
KR+GG G K+C +SP LQ VG + RTE+VK+LWAYIR+NNLQDPSNKRKI+CD+
Sbjct: 131 GKRKGG--GFTKLCSISPTLQEFVGASELARTEVVKKLWAYIRENNLQDPSNKRKILCDE 188
Query: 224 ALRVVFETDCTDMFKMNKLLAKHIIPLEPT-----KESSKRFKPDAESTTEGME-----S 273
L+ +F+ + DMF+MNK L KHI PL K+S+ + KP EG + S
Sbjct: 189 TLKKLFKVNSIDMFQMNKALTKHIWPLNSEGPASPKKSTPKEKPQKREKNEGKKQKVGSS 248
Query: 274 GPSSVI-----ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKL 328
P + + +S+ LA F+GTG + +++ K +W+YIK N+L+DP + I+CD KL
Sbjct: 249 RPGTGLNAPLQLSDDLANFIGTGESMLSRSDVVKIMWDYIKENNLQDPSDRRKIICDEKL 308
Query: 329 RELLGCESISALGIQEMLA 347
+ L +S + + ++L+
Sbjct: 309 KNLFQVDSFTGFTVSKLLS 327
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 1 MVSDQEIAKGVETLLRQSDRNASTSLNGVVKQLEAKLGLDLSHKAGFIRDQISLLL 56
MVSD E+ + + +L+ SD +T+ + ++LE G+DLS K F+R+Q+ +LL
Sbjct: 1 MVSDSELVERLREVLKDSDLTTTTT-GALRRRLEEDFGVDLSDKKAFVREQVDILL 55
>gi|15230276|ref|NP_188538.1| SWIB complex BAF60b domain-containing protein [Arabidopsis
thaliana]
gi|332642670|gb|AEE76191.1| SWIB complex BAF60b domain-containing protein [Arabidopsis
thaliana]
Length = 462
Score = 167 bits (422), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 86/205 (41%), Positives = 123/205 (60%), Gaps = 18/205 (8%)
Query: 165 KRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDA 224
KR+GG GG KVC +SPELQA G + RTE+VK LW YI++NNLQDP++KR IICD++
Sbjct: 257 KRKGG-GGFAKVCSLSPELQAFTGVTELARTEVVKLLWKYIKENNLQDPNDKRSIICDES 315
Query: 225 LRVVFETDCTDMFKMNKLLAKHIIPLEPT----------KESSKRFKPDAEST--TEGME 272
R +F + +MF+MNK L KHI PLE K ++ + D +S E +
Sbjct: 316 FRSLFPVESINMFQMNKQLTKHIWPLEDNAGESVSSKSPKNGKQKMESDGDSEEPNEKDK 375
Query: 273 SGPSSVI----ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKL 328
V+ +S+AL KFLG G + +A+ KR+WEYI N L+DP + ++CD KL
Sbjct: 376 KQKKEVLAPLPLSDALVKFLGDGENSLSRADVVKRLWEYINHNDLQDPSDKRRVICDEKL 435
Query: 329 RELLGCESISALGIQEMLARNHFLR 353
+EL +S + ++L NHF++
Sbjct: 436 KELFEVDSFEDTSVSKLLT-NHFIK 459
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 79/235 (33%), Positives = 115/235 (48%), Gaps = 51/235 (21%)
Query: 161 PVGAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKII 220
PV AK+RGG G+ KV +SP+L+ VVG + RTE+VK++WAYIR+ +LQDP ++RKI+
Sbjct: 106 PVKAKKRGG--GITKVSQLSPQLEKVVGASQLGRTEVVKKMWAYIREKDLQDPKDRRKIV 163
Query: 221 CDDALRVVFETDCTDMFKMNKLLAKHIIPLEPTKESSKRFK-PDAESTTEGME------- 272
CD+ L +F +MF+MNK L KHI PL + K D + +EG +
Sbjct: 164 CDELLHSLFRVKTINMFQMNKALTKHIWPLGDGDGCANDVKEEDEDEASEGTDKKGEQSE 223
Query: 273 --------------------------------------SGPSSVI-ISEALAKFLGTGGR 293
G + V +S L F TG
Sbjct: 224 EVEENKEEESEEQEVRSLRKRKRKKPAKSVEKPKRKGGGGFAKVCSLSPELQAF--TGVT 281
Query: 294 EMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLAR 348
E+ + E K +W+YIK N+L+DP + I+CD R L ESI+ + + L +
Sbjct: 282 ELARTEVVKLLWKYIKENNLQDPNDKRSIICDESFRSLFPVESINMFQMNKQLTK 336
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 45/64 (70%)
Query: 188 GQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHI 247
G+ ++ R ++VK+LW YI N+LQDPS+KR++ICD+ L+ +FE D + ++KLL H
Sbjct: 398 GENSLSRADVVKRLWEYINHNDLQDPSDKRRVICDEKLKELFEVDSFEDTSVSKLLTNHF 457
Query: 248 IPLE 251
I E
Sbjct: 458 IKAE 461
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 1 MVSDQEIAKGVETLLRQSDRNASTSLNGVVKQLEAKLGLDLSHKAGFIRDQISLLLRSH 59
MVSD ++ + +L SD N +T + V +QLEA G+DL+ K +IRDQI L S+
Sbjct: 1 MVSDLDLVTRLREILGSSDLNTATPAS-VRRQLEADFGVDLTDKKAYIRDQIDTFLESN 58
>gi|108711237|gb|ABF99032.1| SWIB complex BAF60b domain-containing protein, putative, expressed
[Oryza sativa Japonica Group]
gi|218193805|gb|EEC76232.1| hypothetical protein OsI_13647 [Oryza sativa Indica Group]
gi|222625850|gb|EEE59982.1| hypothetical protein OsJ_12695 [Oryza sativa Japonica Group]
Length = 334
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 85/202 (42%), Positives = 122/202 (60%), Gaps = 20/202 (9%)
Query: 164 AKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDD 223
KR+GG G K+C +SP LQ VG + RTE+VK+LWAYIR+NNLQDPSNKRKI+CD+
Sbjct: 128 GKRKGG--GFTKLCSISPTLQEFVGASELARTEVVKKLWAYIRENNLQDPSNKRKILCDE 185
Query: 224 ALRVVFETDCTDMFKMNKLLAKHIIPLE--------------PTKESSKRFKPDAESTTE 269
L+ +F + DMF+MNK L KHI PL P ++ KR + + +
Sbjct: 186 RLKKIFNVNSIDMFQMNKALTKHIWPLNSDGPVTSASPERSTPKEKPQKRERNEGKKQKG 245
Query: 270 GMESGPSSVII----SEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCD 325
G S ++ S+ L KF+GTG + +++ KR+W+YIK N L+DP + I+CD
Sbjct: 246 GSSGSGSGFLVPLQLSDDLVKFIGTGESMLSRSDVVKRMWDYIKENKLQDPSDRRKIICD 305
Query: 326 AKLRELLGCESISALGIQEMLA 347
KL++LL ES + + ++LA
Sbjct: 306 EKLKDLLQVESFNGFTVSKLLA 327
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 1 MVSDQEIAKGVETLLRQSDRNASTSLNGVVKQLEAKLGLDLSHKAGFIRDQISLLL 56
MVSD E+ + + +LR SD N +T+ + ++LE G+DLS K FIR+Q+ LLL
Sbjct: 1 MVSDSELVERLREVLRSSDLNTTTTA-ILRRRLEEDFGVDLSDKKLFIREQVDLLL 55
>gi|9280327|dbj|BAB01706.1| unnamed protein product [Arabidopsis thaliana]
Length = 452
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/207 (42%), Positives = 121/207 (58%), Gaps = 20/207 (9%)
Query: 165 KRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDA 224
KR+GG GG KVC +SPELQA G + RTE+VK LW YI++NNLQDP++KR IICD++
Sbjct: 245 KRKGG-GGFAKVCSLSPELQAFTGVTELARTEVVKLLWKYIKENNLQDPNDKRSIICDES 303
Query: 225 LRVVFETDCTDMFKMNKLLAKHIIPLEPTKESSKRFKP--------------DAESTTEG 270
R +F + +MF+MNK L KHI PLE S K D+E E
Sbjct: 304 FRSLFPVESINMFQMNKQLTKHIWPLEDNAGESVSSKSPKNGKQKMESDGDTDSEEPNEK 363
Query: 271 MESGPSSVI----ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDA 326
+ V+ +S+AL KFLG G + +A+ KR+WEYI N L+DP + ++CD
Sbjct: 364 DKKQKKEVLAPLPLSDALVKFLGDGENSLSRADVVKRLWEYINHNDLQDPSDKRRVICDE 423
Query: 327 KLRELLGCESISALGIQEMLARNHFLR 353
KL+EL +S + ++L NHF++
Sbjct: 424 KLKELFEVDSFEDTSVSKLLT-NHFIK 449
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 114/237 (48%), Gaps = 53/237 (22%)
Query: 161 PVGAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKII 220
PV AK+RGG G+ KV +SP+L+ VVG + RTE+VK++WAYIR+ +LQDP ++RKI+
Sbjct: 92 PVKAKKRGG--GITKVSQLSPQLEKVVGASQLGRTEVVKKMWAYIREKDLQDPKDRRKIV 149
Query: 221 CDDALRVVFETDCTDMFKMNKLLAKHIIPLEPTKESSKRFK-PDAESTTEGME------- 272
CD+ L +F +MF+MNK L KHI PL + K D + +EG +
Sbjct: 150 CDELLHSLFRVKTINMFQMNKALTKHIWPLGDGDGCANDVKEEDEDEASEGTDKKGEQSE 209
Query: 273 ----------------------------------------SGPSSVI-ISEALAKFLGTG 291
G + V +S L F G
Sbjct: 210 EVEENKEEESEEQEVRSLRKRKRKKNRPAKSVEKPKRKGGGGFAKVCSLSPELQAFTGV- 268
Query: 292 GREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLAR 348
E+ + E K +W+YIK N+L+DP + I+CD R L ESI+ + + L +
Sbjct: 269 -TELARTEVVKLLWKYIKENNLQDPNDKRSIICDESFRSLFPVESINMFQMNKQLTK 324
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 45/64 (70%)
Query: 188 GQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHI 247
G+ ++ R ++VK+LW YI N+LQDPS+KR++ICD+ L+ +FE D + ++KLL H
Sbjct: 388 GENSLSRADVVKRLWEYINHNDLQDPSDKRRVICDEKLKELFEVDSFEDTSVSKLLTNHF 447
Query: 248 IPLE 251
I E
Sbjct: 448 IKAE 451
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 1 MVSDQEIAKGVETLLRQSDRNASTSLNGVVKQLEAKLGLDLSHKAGFIRDQISLLLRSH 59
MVSD ++ + +L SD N +T + V +QLEA G+DL+ K +IRDQI L S+
Sbjct: 1 MVSDLDLVTRLREILGSSDLNTATPAS-VRRQLEADFGVDLTDKKAYIRDQIDTFLESN 58
>gi|297830558|ref|XP_002883161.1| SWIB complex BAF60b domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329001|gb|EFH59420.1| SWIB complex BAF60b domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 463
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 90/206 (43%), Positives = 123/206 (59%), Gaps = 19/206 (9%)
Query: 165 KRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDA 224
KR+GG GG KVC +SPELQA G + RTE+VK LW YI++NNLQDP++KR IICD++
Sbjct: 257 KRKGG-GGFAKVCSLSPELQAFTGVTELARTEVVKMLWKYIKENNLQDPNDKRIIICDES 315
Query: 225 LRVVFETDCTDMFKMNKLLAKHIIPLEPT----------KESSKRFKPDAEST--TEGME 272
LR +F + +MF+M+KLL KHI PLE K ++ + D +S E +
Sbjct: 316 LRSLFPFESINMFQMSKLLTKHIWPLEDNAGESVSSNSPKNGKQKMESDGDSEEPNEKDK 375
Query: 273 SGPSSVI----ISEALAKFLGTGGREML-QAEATKRVWEYIKVNHLEDPLNSMVILCDAK 327
V+ +S AL KFLG G L +A+ KR+WEYIK N L+DP + I+CD K
Sbjct: 376 KQKKEVLAPLPLSVALVKFLGNNGESSLSRADVGKRLWEYIKQNDLQDPSDKRRIICDEK 435
Query: 328 LRELLGCESISALGIQEMLARNHFLR 353
L+EL +S +L NHF++
Sbjct: 436 LKELFEVDSFEDTSFSTLLT-NHFIK 460
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 48/90 (53%), Positives = 66/90 (73%), Gaps = 2/90 (2%)
Query: 161 PVGAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKII 220
PV AK+RGG G KV +SP+L+ VVG + RTE+VK++WAYIR+N+LQDP ++RKI+
Sbjct: 106 PVKAKKRGG--GFTKVSQLSPQLEKVVGASQLGRTEVVKKMWAYIRENDLQDPKDRRKIV 163
Query: 221 CDDALRVVFETDCTDMFKMNKLLAKHIIPL 250
CD+ L +F +MF+M+K L KHI PL
Sbjct: 164 CDELLHSLFRVKTINMFQMSKALTKHIWPL 193
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 44/64 (68%)
Query: 188 GQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHI 247
G+ ++ R ++ K+LW YI++N+LQDPS+KR+IICD+ L+ +FE D + + LL H
Sbjct: 399 GESSLSRADVGKRLWEYIKQNDLQDPSDKRRIICDEKLKELFEVDSFEDTSFSTLLTNHF 458
Query: 248 IPLE 251
I E
Sbjct: 459 IKAE 462
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 1 MVSDQEIAKGVETLLRQSDRNASTSLNGVVKQLEAKLGLDLSHKAGFIRDQISLLLRSHP 60
MVSD ++ + +L SD N +T + V +QLEA G+DL+ K +IRDQI L S+
Sbjct: 1 MVSDLDLVTRLREILGSSDLNTATPAS-VRRQLEADFGIDLTDKKAYIRDQIDTFLESNG 59
Query: 61 TPQQVATNTQPQPQPQPQQL 80
+ +++P+ +++
Sbjct: 60 AVEDKPESSKPEEDINAEEI 79
Score = 41.2 bits (95), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 32/59 (54%)
Query: 290 TGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLAR 348
G ++ + E K++W YI+ N L+DP + I+CD L L ++I+ + + L +
Sbjct: 130 VGASQLGRTEVVKKMWAYIRENDLQDPKDRRKIVCDELLHSLFRVKTINMFQMSKALTK 188
>gi|147860060|emb|CAN83123.1| hypothetical protein VITISV_044372 [Vitis vinifera]
Length = 332
Score = 163 bits (413), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 85/218 (38%), Positives = 130/218 (59%), Gaps = 28/218 (12%)
Query: 163 GAKRRGGP----------GGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQD 212
GAK+RG GG K+C +SPELQ +G P + RTE+VKQLW +IR+ +LQD
Sbjct: 113 GAKKRGSKKSNKEVKKRGGGFCKLCSLSPELQKFIGVPELARTEVVKQLWVHIREKDLQD 172
Query: 213 PSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLE----------PTKESSKRFKP 262
P+N+R IICD+ LR +F D +MF+MNK L+KHI PL+ P ++ K+ +
Sbjct: 173 PNNRRNIICDETLRALFGVDSINMFQMNKALSKHIWPLDSDDAAPVKPTPKEKQRKQERX 232
Query: 263 DAES---TTEGMESGPSSVI----ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLED 315
D++ + + G S + +S+AL KFL + +AE K++WEYIK N+L+D
Sbjct: 233 DSDEPKRKQKRQKGGNSGFLAPLPLSDALVKFLNIEESALSRAEVVKKIWEYIKQNNLQD 292
Query: 316 PLNSMVILCDAKLRELLGCESISALGIQEMLARNHFLR 353
P + I+CD KL+EL +S + + ++L+ HF++
Sbjct: 293 PSDKRRIICDEKLKELFDVDSFNGFTVPKLLS-AHFIK 329
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 48/65 (73%)
Query: 187 VGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKH 246
+ + A+ R E+VK++W YI++NNLQDPS+KR+IICD+ L+ +F+ D + F + KLL+ H
Sbjct: 267 IEESALSRAEVVKKIWEYIKQNNLQDPSDKRRIICDEKLKELFDVDSFNGFTVPKLLSAH 326
Query: 247 IIPLE 251
I E
Sbjct: 327 FIKTE 331
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 1 MVSDQEIAKGVETLLRQSDRNASTSLNGVVKQLEAKLGLDLSHKAGFIRDQISLLLRSH 59
MVSD E+ + LR SD N +T+ V ++LE G+DLS K FIR+ + L L+S
Sbjct: 1 MVSDSELVARLHEFLRSSDLNTTTTAI-VRRKLEEDFGIDLSGKKAFIREHVDLFLQSQ 58
>gi|449461413|ref|XP_004148436.1| PREDICTED: upstream activation factor subunit UAF30-like [Cucumis
sativus]
Length = 332
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/222 (37%), Positives = 126/222 (56%), Gaps = 35/222 (15%)
Query: 164 AKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDD 223
K+RGG G K+C +SP+LQ +G P M RTE+VKQLW +IR+NNLQDPSN+R I+CD+
Sbjct: 111 VKKRGG--GFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDE 168
Query: 224 ALRVVFETDCTDMFKMNKLLAKHIIPLEPT----------------------------KE 255
L+ +F + +MF+MNK L+KHI PLE K+
Sbjct: 169 PLKALFGVNSINMFQMNKALSKHIWPLESNDVIPAKSSQKEKPQKEKQPKEKPQKKRQKQ 228
Query: 256 SSKRFKPDAESTTEGMESGPSSVI----ISEALAKFLGTGGREMLQAEATKRVWEYIKVN 311
+ D+ + + G S + +S AL FLGTG + +++ KR+W+YIK N
Sbjct: 229 GKEEDSDDSAREDKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQN 288
Query: 312 HLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNHFLR 353
+L+DP + I+CD +L+EL +S + + ++LA HF++
Sbjct: 289 NLQDPSDKRRIICDERLKELFDVDSFNGFTVSKLLA-THFIK 329
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 52/65 (80%)
Query: 187 VGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKH 246
G+ A+PR+++VK++W YI++NNLQDPS+KR+IICD+ L+ +F+ D + F ++KLLA H
Sbjct: 267 TGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDERLKELFDVDSFNGFTVSKLLATH 326
Query: 247 IIPLE 251
I ++
Sbjct: 327 FIKMK 331
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 1 MVSDQEIAKGVETLLRQSDRNASTSLNGVVKQLEAKLGLDLSHKAGFIRDQISLLLRSH 59
MVSD E+ + LR SD N +T+ V ++LE G+DLS K FIR+Q+ L L++
Sbjct: 1 MVSDSELISRLRDFLRNSDLNTTTTA-IVRRKLEEDFGIDLSDKKLFIREQVDLFLQTE 58
>gi|449527809|ref|XP_004170902.1| PREDICTED: uncharacterized protein LOC101226406, partial [Cucumis
sativus]
Length = 225
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/222 (37%), Positives = 126/222 (56%), Gaps = 35/222 (15%)
Query: 164 AKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDD 223
K+RGG G K+C +SP+LQ +G P M RTE+VKQLW +IR+NNLQDPSN+R I+CD+
Sbjct: 4 VKKRGG--GFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDE 61
Query: 224 ALRVVFETDCTDMFKMNKLLAKHIIPLEPT----------------------------KE 255
L+ +F + +MF+MNK L+KHI PLE K+
Sbjct: 62 PLKALFGVNSINMFQMNKALSKHIWPLESNDVIPAKSSQKEKPQKEKQPKEKPQKKRQKQ 121
Query: 256 SSKRFKPDAESTTEGMESGPSSVI----ISEALAKFLGTGGREMLQAEATKRVWEYIKVN 311
+ D+ + + G S + +S AL FLGTG + +++ KR+W+YIK N
Sbjct: 122 GKEEDSDDSAREDKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQN 181
Query: 312 HLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNHFLR 353
+L+DP + I+CD +L+EL +S + + ++LA HF++
Sbjct: 182 NLQDPSDKRRIICDERLKELFDVDSFNGFTVSKLLA-THFIK 222
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 52/65 (80%)
Query: 187 VGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKH 246
G+ A+PR+++VK++W YI++NNLQDPS+KR+IICD+ L+ +F+ D + F ++KLLA H
Sbjct: 160 TGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDERLKELFDVDSFNGFTVSKLLATH 219
Query: 247 IIPLE 251
I ++
Sbjct: 220 FIKMK 224
>gi|226508644|ref|NP_001147426.1| LOC100281035 [Zea mays]
gi|195611286|gb|ACG27473.1| SWIB/MDM2 domain containing protein [Zea mays]
gi|413932975|gb|AFW67526.1| SWIB/MDM2 domain containing protein [Zea mays]
Length = 328
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/211 (39%), Positives = 126/211 (59%), Gaps = 17/211 (8%)
Query: 152 SAEVAKENPPVGAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQ 211
S+ K+ K+RGG G K+C +SP LQ VG + RTE+VK+LWAYIR+NNLQ
Sbjct: 113 SSSARKKQRGNDGKKRGG--GFTKLCSLSPALQEFVGASELARTEVVKKLWAYIRENNLQ 170
Query: 212 DPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEPT-----KESSKRFKPDAES 266
D +N+RKI+ D+ L+ +F + DMF+MNK L KHI PL S+ + KP +
Sbjct: 171 DQNNRRKILPDERLKKIFNVNSIDMFQMNKALTKHIWPLNSEGPVSPDRSTPKEKPQKKD 230
Query: 267 TTEGMESGPSS----------VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDP 316
EG + S + +S+ L KF+GTG + +++ KR+W+YIK N+L+DP
Sbjct: 231 RNEGKKQKGGSSGAGSGLLVPLQLSDDLMKFIGTGESMLSRSDVVKRMWDYIKENNLQDP 290
Query: 317 LNSMVILCDAKLRELLGCESISALGIQEMLA 347
+ I+CD KL++LLG E+ + + ++LA
Sbjct: 291 SDRRKIICDEKLKDLLGVETFTGFTVSKLLA 321
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 1 MVSDQEIAKGVETLLRQSDRNASTSLNGVVKQLEAKLGLDLSHKAGFIRDQISLLL 56
MVSD E+ + ++ +LR SD N +T+ + ++LE G DLSHK FIR+Q+ L L
Sbjct: 1 MVSDLELVERLQEVLRSSDLNTTTTA-ALRRRLEEDFGADLSHKKAFIREQVDLFL 55
>gi|242038013|ref|XP_002466401.1| hypothetical protein SORBIDRAFT_01g007140 [Sorghum bicolor]
gi|241920255|gb|EER93399.1| hypothetical protein SORBIDRAFT_01g007140 [Sorghum bicolor]
Length = 326
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 82/199 (41%), Positives = 121/199 (60%), Gaps = 17/199 (8%)
Query: 164 AKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDD 223
K+RGG G K+C +SP LQ VG + RTE+VK+LWAYIR+NNLQD +N+RKI+ D+
Sbjct: 123 GKKRGG--GFTKLCSLSPALQEFVGASELARTEVVKKLWAYIRENNLQDQNNRRKILPDE 180
Query: 224 ALRVVFETDCTDMFKMNKLLAKHIIPLEPT-----KESSKRFKPDAESTTEGMESGPSS- 277
LR +F + DMF+MNK L KHI PL S+ + KP EG + S
Sbjct: 181 RLRKIFNVNSIDMFQMNKALTKHIWPLNSEGPVSPDRSTPKEKPQKRDRNEGKKQKGGSS 240
Query: 278 ---------VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKL 328
+ +S+ L KF+GTG + +++ K++W+YIK N+L+DP + I+CD KL
Sbjct: 241 GAGSGLLVPLQLSDDLVKFIGTGESMLSRSDVVKKMWDYIKENNLQDPSDRRKIICDEKL 300
Query: 329 RELLGCESISALGIQEMLA 347
++LLG E+ + + ++LA
Sbjct: 301 KDLLGVETFTGFTVSKLLA 319
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 1 MVSDQEIAKGVETLLRQSDRNASTSLNGVVKQLEAKLGLDLSHKAGFIRDQISLLL 56
MVSD E+ + ++ +LR SD N +T+ + ++LE G DLSHK FIR+Q+ L L
Sbjct: 1 MVSDSELVERLQEVLRSSDLNTTTTA-ALRRRLEEDFGADLSHKKAFIREQVDLFL 55
>gi|413932976|gb|AFW67527.1| hypothetical protein ZEAMMB73_352797 [Zea mays]
Length = 316
Score = 160 bits (405), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 82/202 (40%), Positives = 125/202 (61%), Gaps = 11/202 (5%)
Query: 152 SAEVAKENPPVGAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQ 211
S+ K+ K+RGG G K+C +SP LQ VG + RTE+VK+LWAYIR+NNLQ
Sbjct: 113 SSSARKKQRGNDGKKRGG--GFTKLCSLSPALQEFVGASELARTEVVKKLWAYIRENNLQ 170
Query: 212 DPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLE------PTKESSKRFKPDAE 265
D +N+RKI+ D+ L+ +F + DMF+MNK L KHI PL P + + K+ K +
Sbjct: 171 DQNNRRKILPDERLKKIFNVNSIDMFQMNKALTKHIWPLNSEGPVSPDRSTRKKQKGGSS 230
Query: 266 STTEGMESGPSSVIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCD 325
G+ + +S+ L KF+GTG + +++ KR+W+YIK N+L+DP + I+CD
Sbjct: 231 GAGSGL---LVPLQLSDDLMKFIGTGESMLSRSDVVKRMWDYIKENNLQDPSDRRKIICD 287
Query: 326 AKLRELLGCESISALGIQEMLA 347
KL++LLG E+ + + ++LA
Sbjct: 288 EKLKDLLGVETFTGFTVSKLLA 309
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 1 MVSDQEIAKGVETLLRQSDRNASTSLNGVVKQLEAKLGLDLSHKAGFIRDQISLLL 56
MVSD E+ + ++ +LR SD N +T+ + ++LE G DLSHK FIR+Q+ L L
Sbjct: 1 MVSDLELVERLQEVLRSSDLNTTTTA-ALRRRLEEDFGADLSHKKAFIREQVDLFL 55
>gi|224081550|ref|XP_002306454.1| predicted protein [Populus trichocarpa]
gi|222855903|gb|EEE93450.1| predicted protein [Populus trichocarpa]
Length = 313
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/227 (38%), Positives = 131/227 (57%), Gaps = 40/227 (17%)
Query: 162 VGAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIIC 221
V ++RGG G +K+C +SP+LQ +G P + RTE+V+QLW YIR+ NLQDPS++R I C
Sbjct: 90 VQGRKRGG--GFSKLCSLSPQLQEFIGVPHLARTEVVRQLWTYIREKNLQDPSDRRNINC 147
Query: 222 DDALRVVFETDCTDMFKMNKLLAKHIIPLEP-------TKESSKRFKPDAESTTE----- 269
D+ L+ +F D +MF+MNK L++HI PL+ +K+ K+ K + E E
Sbjct: 148 DEPLQALFGVDSINMFQMNKALSRHIWPLDSEDVVSINSKQHEKQHKREREEGNESNYDA 207
Query: 270 ------------GMES---------GPSSVI----ISEALAKFLGTGGREMLQAEATKRV 304
G ES G S + +S+AL KFLGTG + +++ KR+
Sbjct: 208 ILPRMLYLYVKYGNESNKKEKKQKGGNSGFLAPLQLSDALKKFLGTGESTLSRSDVVKRM 267
Query: 305 WEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNHF 351
WEYIK N+L+DP + ILCD KL+EL +S + + ++L+ HF
Sbjct: 268 WEYIKQNNLQDPSDKRRILCDVKLKELFDIDSFTGFTVPKLLSA-HF 313
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 132/315 (41%), Gaps = 70/315 (22%)
Query: 1 MVSDQEIAKGVETLLRQSDRNASTSLNGVVKQLEAKLGLDLSHKAGFIRDQISLLLRSHP 60
MVSD E+ + ++ LR +D + +T+ V ++LE +DLS K FIR+Q+ L L++
Sbjct: 1 MVSDSELTERLKEFLRNADLDKTTT-GTVRRKLEEDFAIDLSDKKVFIREQVDLFLQNEL 59
Query: 61 TPQQVATNTQPQPQPQPQQLPPKDHFTLQHHPQ-----------FSLPP--QQF--PPHF 105
Q + + + Q + D LQ Q SL P Q+F PH
Sbjct: 60 DDGQKNGDNEYTHEDQKVNV-ENDGCDLQEEVQGRKRGGGFSKLCSLSPQLQEFIGVPHL 118
Query: 106 ALHHPHPHLPQFPQELNFSQP---------QPSQA------------------------- 131
A L + +E N P +P QA
Sbjct: 119 ARTEVVRQLWTYIREKNLQDPSDRRNINCDEPLQALFGVDSINMFQMNKALSRHIWPLDS 178
Query: 132 ---AAPPPQPHSNVSKAE-----------AFPQ---ISAEVAKENPPVGAKRRGGPGGLN 174
+ + H K E P+ + + E+ K++GG G
Sbjct: 179 EDVVSINSKQHEKQHKREREEGNESNYDAILPRMLYLYVKYGNESNKKEKKQKGGNSGFL 238
Query: 175 KVCGVSPELQAVV--GQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETD 232
+S L+ + G+ + R+++VK++W YI++NNLQDPS+KR+I+CD L+ +F+ D
Sbjct: 239 APLQLSDALKKFLGTGESTLSRSDVVKRMWEYIKQNNLQDPSDKRRILCDVKLKELFDID 298
Query: 233 CTDMFKMNKLLAKHI 247
F + KLL+ H
Sbjct: 299 SFTGFTVPKLLSAHF 313
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 79/169 (46%), Gaps = 17/169 (10%)
Query: 195 TEIVKQLWAYIRKNNLQDPSN---KRKIICDDALRV----VFETDCTDMFKMNKLL---- 243
+E+ ++L ++R +L + +RK+ D A+ + VF + D+F N+L
Sbjct: 5 SELTERLKEFLRNADLDKTTTGTVRRKLEEDFAIDLSDKKVFIREQVDLFLQNELDDGQK 64
Query: 244 -AKHIIPLEPTKESSKRFKPDAESTTEGMESG---PSSVIISEALAKFLGTGGREMLQAE 299
+ E K + + D + +G + G +S L +F+G + + E
Sbjct: 65 NGDNEYTHEDQKVNVENDGCDLQEEVQGRKRGGGFSKLCSLSPQLQEFIGVP--HLARTE 122
Query: 300 ATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLAR 348
+++W YI+ +L+DP + I CD L+ L G +SI+ + + L+R
Sbjct: 123 VVRQLWTYIREKNLQDPSDRRNINCDEPLQALFGVDSINMFQMNKALSR 171
>gi|226506384|ref|NP_001148210.1| SWIB/MDM2 domain containing protein [Zea mays]
gi|195616714|gb|ACG30187.1| SWIB/MDM2 domain containing protein [Zea mays]
Length = 329
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 80/199 (40%), Positives = 121/199 (60%), Gaps = 17/199 (8%)
Query: 164 AKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDD 223
K+RGG G K+C +SP LQ VG + RTE+VK+LWAYIR+NNLQD +N+RKI+ D+
Sbjct: 126 GKKRGG--GFTKLCSLSPALQEFVGASELARTEVVKKLWAYIRENNLQDQNNRRKILPDE 183
Query: 224 ALRVVFETDCTDMFKMNKLLAKHIIPLEPT-----KESSKRFKPDAESTTEGMESGPSS- 277
L+ +F + DMF+MNK L KHI PL S+ + KP +EG + S
Sbjct: 184 RLKKIFNVNSIDMFQMNKALTKHIWPLNSEGPVSPDRSTPKEKPQKRDRSEGKKQKGGSS 243
Query: 278 ---------VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKL 328
+ +S+ L KF+GTG + +++ K++W+YIK N+L+DP + I+CD KL
Sbjct: 244 GAGSGFLVPLQLSDDLVKFIGTGESMLSRSDVVKKMWDYIKGNNLQDPSDRRKIICDEKL 303
Query: 329 RELLGCESISALGIQEMLA 347
++L G E+ + + ++LA
Sbjct: 304 KDLFGVETFTGFTVSKLLA 322
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 1 MVSDQEIAKGVETLLRQSDRNASTSLNGVVKQLEAKLGLDLSHKAGFIRDQISLLL 56
MVSD E+ + ++ +LR SD N +T+ + ++LE G DLSHK FIR+Q+ L L
Sbjct: 1 MVSDSELVERLQEVLRSSDLNTTTTA-ALRRRLEEDFGADLSHKKAFIREQVDLFL 55
>gi|357483029|ref|XP_003611801.1| Upstream activation factor subunit spp27 [Medicago truncatula]
gi|355513136|gb|AES94759.1| Upstream activation factor subunit spp27 [Medicago truncatula]
Length = 361
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 125/211 (59%), Gaps = 35/211 (16%)
Query: 175 KVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCT 234
K+C +SP+LQ VG P M RTE+VKQLWAYIR+ +LQDP+N+R IICD+ LR +F D
Sbjct: 134 KICSLSPQLQEFVGAPEMARTEVVKQLWAYIREKDLQDPNNRRNIICDEPLRALFGVDTI 193
Query: 235 DMFKMNKLLAKHIIPLEPTK----ESSKRFKP-------------------DAESTTEGM 271
+MF+MNK+LAKHI PL+ +S+ + KP D +G
Sbjct: 194 NMFQMNKVLAKHIWPLDSDDVIQVKSAPKEKPAPKEKPARKEKKKKQEREDDDLDEPKGK 253
Query: 272 E------SGPSSVI---ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVI 322
E SG + +S+ALAKFLG E+ +++ KR+W+YIK N+L+DP + I
Sbjct: 254 EKRQKVGSGKGFLAPLQLSDALAKFLGES--ELSRSDVIKRMWDYIKGNNLQDPSDKRQI 311
Query: 323 LCDAKLRELLGCESISALGIQEMLARNHFLR 353
LCD KL+EL +S + ++LA HF++
Sbjct: 312 LCDEKLKELFDVDSFVGFTVTKLLA-PHFIK 341
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 58/96 (60%), Gaps = 3/96 (3%)
Query: 159 NPPVGAKRR---GGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSN 215
+ P G ++R G G +S L +G+ + R++++K++W YI+ NNLQDPS+
Sbjct: 248 DEPKGKEKRQKVGSGKGFLAPLQLSDALAKFLGESELSRSDVIKRMWDYIKGNNLQDPSD 307
Query: 216 KRKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLE 251
KR+I+CD+ L+ +F+ D F + KLLA H I E
Sbjct: 308 KRQILCDEKLKELFDVDSFVGFTVTKLLAPHFIKAE 343
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 7/72 (9%)
Query: 1 MVSDQEIAKGVETLLRQSDRNASTSLNGVVKQLEAKLGLDLSHKAGFIRDQISLLLRSHP 60
MVS+ E+ + LR SD N +T+ + V +QLE+ G+DLS + FIR+Q+ L L
Sbjct: 1 MVSESELIDRLREFLRNSDLNTTTT-STVRRQLESDFGIDLSDRKSFIREQVDLFL---- 55
Query: 61 TPQQVATNTQPQ 72
Q V + +PQ
Sbjct: 56 --QTVQQDDEPQ 65
>gi|116788399|gb|ABK24867.1| unknown [Picea sitchensis]
Length = 297
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 76/172 (44%), Positives = 104/172 (60%), Gaps = 25/172 (14%)
Query: 168 GGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRV 227
G GG NK+CG+SPELQ+V+G + RT++VKQLW YIR+N+LQDP N+RKI+CDD LR
Sbjct: 121 GTGGGFNKLCGLSPELQSVLGVSELSRTQVVKQLWVYIRENDLQDPQNRRKILCDDKLRS 180
Query: 228 VFETDCTDMFKMNKLLAKHII------------------------PLEPTKESSKRFKPD 263
VF D DMF+MNK+L+ HI+ LE ++ SKR K +
Sbjct: 181 VFRKDSIDMFEMNKVLSNHILRLENGNVVSEDSEPKSKRQKQEKKGLEDSESKSKRQKQE 240
Query: 264 AESTTEGMESGPSSVI-ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLE 314
+ SG S + +S+AL FLGTG ++ +AE KR+W YIK +L+
Sbjct: 241 KKDGGRVKSSGFCSPLPLSDALVTFLGTGESQLSRAEVVKRIWGYIKDKNLQ 292
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 291 GGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNH 350
G E+ + + K++W YI+ N L+DP N ILCD KLR + +SI + ++L+ NH
Sbjct: 141 GVSELSRTQVVKQLWVYIRENDLQDPQNRRKILCDDKLRSVFRKDSIDMFEMNKVLS-NH 199
Query: 351 FLR 353
LR
Sbjct: 200 ILR 202
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 1 MVSDQEIAKGVETLLRQSDRNASTSLNGVVKQLEAKLGLDLSHKAGFIRDQISL 54
MV +QEIA+ ++ +L+ +D +T+ + + ++LE +LG+DL+ K FIR+Q+ L
Sbjct: 1 MVLEQEIAERLKEILQTADLTTTTTTS-IRRKLEEELGVDLTSKKAFIREQVDL 53
>gi|255639447|gb|ACU20018.1| unknown [Glycine max]
Length = 189
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 103/218 (47%), Positives = 129/218 (59%), Gaps = 33/218 (15%)
Query: 1 MVSDQEIAKGVETLLRQSDRNASTSLNGVVKQLEAKLGLDLSHKAGFIRDQISLLLRSHP 60
MV+++EI++ V++LLR+S+ + T+LN VV++L+AKLG DL+HK FI QI+LL S
Sbjct: 1 MVTEEEISEAVQSLLRESNPSRFTTLNQVVEELQAKLGHDLTHKIDFITAQINLLFGSRQ 60
Query: 61 TPQQVATNTQPQPQPQPQQLPPKDHFTLQHHPQFSLPPQQFPPHFALHHPHPHLPQFPQE 120
PQ P Q QQ PKDHF +P F H P F Q
Sbjct: 61 PPQN--------PHRQLQQ--PKDHFAPPPNPNF--------------HSAPVSVGF-QL 95
Query: 121 LNFSQPQPSQAAAPPPQPHSNVSKAEA--FPQI--SAEVAKENPPVGAKRRGGPGGLNKV 176
NFS S A ++ S+ EA P + +V KE+ KRRGGPGGL K+
Sbjct: 96 QNFS----SSNAVVAAATAADASRIEAPSAPVVVEGNQVPKESTQTKVKRRGGPGGLTKI 151
Query: 177 CGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPS 214
CGVSPELQ +VGQPA+ RTEIVKQLWAYIRKNNLQDPS
Sbjct: 152 CGVSPELQVIVGQPALSRTEIVKQLWAYIRKNNLQDPS 189
>gi|217074210|gb|ACJ85465.1| unknown [Medicago truncatula]
Length = 320
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 83/189 (43%), Positives = 114/189 (60%), Gaps = 34/189 (17%)
Query: 175 KVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCT 234
K+C +SP+LQ VG P M RTE+VKQLWAYIR+ +LQDP+N+R IICD+ LR +F D
Sbjct: 134 KICSLSPQLQEFVGAPEMARTEVVKQLWAYIREKDLQDPNNRRNIICDEPLRALFGVDTI 193
Query: 235 DMFKMNKLLAKHIIPLEPTK----ESSKRFKP-------------------DAESTTEGM 271
+MF+MNK+LAKHI PL+ +S+ + KP D +G
Sbjct: 194 NMFQMNKVLAKHIWPLDSDDVIQVKSAPKEKPAPKEKPTRKEKKKKQEREDDDLDEPKGK 253
Query: 272 E------SGPSSVI---ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVI 322
E SG + +S+ALAKFLG E+ +++ KR+W+YIK N+L+DP + I
Sbjct: 254 EKRQKVGSGKGFIAPLQLSDALAKFLGES--ELSRSDVIKRMWDYIKGNNLQDPSDKRQI 311
Query: 323 LCDAKLREL 331
LCD KL+EL
Sbjct: 312 LCDEKLKEL 320
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISA 339
+S L +F+G EM + E K++W YI+ L+DP N I+CD LR L G ++I+
Sbjct: 138 LSPQLQEFVGAP--EMARTEVVKQLWAYIREKDLQDPNNRRNIICDEPLRALFGVDTINM 195
Query: 340 LGIQEMLAR 348
+ ++LA+
Sbjct: 196 FQMNKVLAK 204
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 7/72 (9%)
Query: 1 MVSDQEIAKGVETLLRQSDRNASTSLNGVVKQLEAKLGLDLSHKAGFIRDQISLLLRSHP 60
MVS+ E+ + LR SD N +T+ + V +QLE+ G+DLS + FIR Q L L
Sbjct: 1 MVSESELIDRLREFLRNSDPNTTTT-STVRRQLESDFGIDLSDRKSFIRGQADLFL---- 55
Query: 61 TPQQVATNTQPQ 72
Q V + +PQ
Sbjct: 56 --QTVQQDDEPQ 65
>gi|297847268|ref|XP_002891515.1| SWIB complex BAF60b domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337357|gb|EFH67774.1| SWIB complex BAF60b domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 372
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 118/240 (49%), Gaps = 52/240 (21%)
Query: 157 KENPPVGAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
K PPV AK+RGG G NK+C +SP+L+ +G + RTE+VK++WAYIR+++LQDP N+
Sbjct: 88 KTEPPVKAKKRGG--GFNKICQLSPQLEKFLGTSQLARTEVVKKMWAYIRQHDLQDPKNR 145
Query: 217 RKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEPTKESSKRFKPDAESTTEGM----- 271
R I+CDD+L +F DMF+MNK LAKHI PL K K + E T G
Sbjct: 146 RNILCDDSLHSLFRVKTIDMFQMNKALAKHIWPLNDGDGCVKNVKGEDEDETSGERYEKE 205
Query: 272 ---------------ESGPSSVI----------------------------ISEALAKFL 288
E SV +S L F
Sbjct: 206 VKIEEAVENNEEVSGEEEDRSVRKRKRKKRKPAKSEEKPKKKGGGFTKVCSLSPELQAFT 265
Query: 289 GTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLAR 348
GT ++ + E + +W+YIK N+L+DP + I+CD LR L ESI+ + + L +
Sbjct: 266 GTA--QLARTEVVRMLWKYIKENNLQDPSDKRTIICDESLRSLFPVESINMFQMNKQLTK 323
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 80/129 (62%), Gaps = 13/129 (10%)
Query: 165 KRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDA 224
K++GG G KVC +SPELQA G + RTE+V+ LW YI++NNLQDPS+KR IICD++
Sbjct: 245 KKKGG--GFTKVCSLSPELQAFTGTAQLARTEVVRMLWKYIKENNLQDPSDKRTIICDES 302
Query: 225 LRVVFETDCTDMFKMNKLLAKHIIPL------EPTKESSK-----RFKPDAESTTEGMES 273
LR +F + +MF+MNK L KHI PL T +S K + + DA++ E
Sbjct: 303 LRSLFPVESINMFQMNKQLTKHIWPLVQEDEAGTTNDSEKGKQKMKMEIDADNDEANDEK 362
Query: 274 GPSSVIISE 282
SS I +E
Sbjct: 363 ATSSRIKTE 371
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 1 MVSDQEIAKGVETLLRQSDRNASTSLNGVVKQLEAKLGLDLSHKAGFIRDQISLLLRSH 59
MVSD ++ + +LR SD +T + V +QLEA G++L+ K F+R+QI L S
Sbjct: 1 MVSDSDLVTQLREILRSSDLETTTPAS-VRRQLEAYFGVELTDKKAFVREQIDAFLESE 58
>gi|224103519|ref|XP_002313088.1| predicted protein [Populus trichocarpa]
gi|222849496|gb|EEE87043.1| predicted protein [Populus trichocarpa]
Length = 458
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 81/216 (37%), Positives = 114/216 (52%), Gaps = 40/216 (18%)
Query: 171 GGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFE 230
GG K+ +SP+LQAVVG P + RTE+VK+LWAYIR+NNLQDP N++KI CD+ALR VF
Sbjct: 115 GGFAKLSSLSPQLQAVVGVPELARTEVVKKLWAYIRENNLQDPKNRKKIKCDEALRAVFH 174
Query: 231 TDCTDMFKMNKLLAKHIIPLEPTKESS---KRFKPDAESTTEG----------------- 270
+ DMF+MNK L+KHI PL T E+ +FK +S +EG
Sbjct: 175 VNSIDMFQMNKALSKHIWPL--TGENGTFLNKFKDINDSGSEGDNGGEQEDDEEEVKKES 232
Query: 271 ---MESGPSSVIISEALAKFLG---------------TGGREMLQAEATKRVWEYIKVNH 312
+ G S + E + K G G E+ + K++W YI+ +
Sbjct: 233 NERSKKGRRSAKVDEDVKKRGGGFTKLCSLSPQLQELVGVPELARTGVVKKLWAYIREKN 292
Query: 313 LEDPLNSMVILCDAKLRELLGCESISALGIQEMLAR 348
L+DP N I+CD LR + +SI + + L +
Sbjct: 293 LQDPKNKRNIICDESLRSIFDVDSIDMFQMNKALTK 328
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 113/212 (53%), Gaps = 27/212 (12%)
Query: 164 AKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDD 223
K+RGG G K+C +SP+LQ +VG P + RT +VK+LWAYIR+ NLQDP NKR IICD+
Sbjct: 249 VKKRGG--GFTKLCSLSPQLQELVGVPELARTGVVKKLWAYIREKNLQDPKNKRNIICDE 306
Query: 224 ALRVVFETDCTDMFKMNKLLAKHIIPL-EPTKESSKRFKPDAESTTEGME---------S 273
+LR +F+ D DMF+MNK L KHI + E S P + T +G E
Sbjct: 307 SLRSIFDVDSIDMFQMNKALTKHIWAVREEDGMSPSNSSPKKKGTKQGREEVSHEPKKKE 366
Query: 274 GPSSVIISEALA-------KFLG-----TGGREMLQAEATKRVWEYIKVNHLEDPLNSMV 321
IS+ LA FL T G +A + V E I N + DP +
Sbjct: 367 KQQKKGISDLLAPLQIPDQDFLVLSLSLTQGLNFARAMSCLHV-ECI-YNRVCDPADKRR 424
Query: 322 ILCDAKLRELLGCESISALGIQEMLARNHFLR 353
I+CD KL+E+ +S + ++L+ HF++
Sbjct: 425 IVCDKKLKEISEVDSFNGFTASKLLSL-HFIK 455
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 1 MVSDQEIAKGVETLLRQSDRNASTSLNGVVKQLEAKLGLDLSHKAGFIRDQISLLLRS 58
MVSD ++ + +LR SD + +T+ + + +QLE G+DLS K FIR+QI L +
Sbjct: 1 MVSDSDLVARLREILRSSDLDTATA-SSIRRQLEEDFGVDLSEKKKFIREQIDTFLET 57
Score = 41.2 bits (95), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 28/44 (63%)
Query: 208 NNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLE 251
N + DP++KR+I+CD L+ + E D + F +KLL+ H I E
Sbjct: 414 NRVCDPADKRRIVCDKKLKEISEVDSFNGFTASKLLSLHFIKTE 457
>gi|302806513|ref|XP_002985006.1| hypothetical protein SELMODRAFT_121478 [Selaginella moellendorffii]
gi|300147216|gb|EFJ13881.1| hypothetical protein SELMODRAFT_121478 [Selaginella moellendorffii]
Length = 311
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/184 (41%), Positives = 110/184 (59%), Gaps = 19/184 (10%)
Query: 177 CGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDM 236
C +S L+A+VG P PR+++VK LWAYIR++NLQ P +KRKI CD+AL+ VF +D DM
Sbjct: 113 CQLSDVLEAIVGIPQAPRSQVVKSLWAYIREHNLQVPEDKRKIKCDEALKKVFNSDYIDM 172
Query: 237 FKMNKLLAKHIIPLEPTK-ESSKRF----------KPDAESTTEGMESGPSSVI------ 279
F MN+ L KH+IPL+ + ++ R + E+ +G S +
Sbjct: 173 FSMNQKLTKHVIPLDDRETRAANRLARKRKAEERAEKKEEAKKARKAAGKSPKVSGFTVP 232
Query: 280 --ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESI 337
IS L +FLGT ++ + E TK++W+YIK N L+DP + ILCD KL +LL C+S
Sbjct: 233 MKISPKLREFLGTEESQLSRPEVTKQLWDYIKSNQLQDPSDRRKILCDEKLEKLLDCKSF 292
Query: 338 SALG 341
+ G
Sbjct: 293 NGFG 296
>gi|359480441|ref|XP_003632462.1| PREDICTED: upstream activation factor subunit spp27-like [Vitis
vinifera]
Length = 296
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 106/179 (59%), Gaps = 27/179 (15%)
Query: 163 GAKRRGGP----------GGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQD 212
GAK+RG GG K+C +SPELQ +G P + RTE+VKQLW +IR+ +LQD
Sbjct: 113 GAKKRGSKKSNKEVKKRGGGFCKLCSLSPELQKFIGVPELARTEVVKQLWVHIREKDLQD 172
Query: 213 PSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLE----------PTKESSKRFKP 262
P+N+R IICD+ LR +F D +MF+MNK L+KHI PL+ P ++ K+ +
Sbjct: 173 PNNRRNIICDETLRALFGVDSINMFQMNKALSKHIWPLDSDDAAPVKPTPKEKQRKQERD 232
Query: 263 DAES---TTEGMESGPSSVI----ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLE 314
D++ + + G S + +S+AL KFL + +AE K++WEYIK N+L+
Sbjct: 233 DSDEPKRKQKRQKGGNSGFLAPLPLSDALVKFLNIEESALSRAEVVKKIWEYIKQNNLQ 291
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISA 339
+S L KF+G E+ + E K++W +I+ L+DP N I+CD LR L G +SI+
Sbjct: 139 LSPELQKFIGVP--ELARTEVVKQLWVHIREKDLQDPNNRRNIICDETLRALFGVDSINM 196
Query: 340 LGIQEMLAR 348
+ + L++
Sbjct: 197 FQMNKALSK 205
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 1 MVSDQEIAKGVETLLRQSDRNASTSLNGVVKQLEAKLGLDLSHKAGFIRDQISLLLRSH 59
MVSD E+ + LR SD N +T+ V ++LE G+DLS K FIR+ + L L+S
Sbjct: 1 MVSDSELVARLHEFLRSSDLNTTTTAI-VRRKLEEDFGIDLSGKKAFIREHVDLFLQSQ 58
>gi|302144157|emb|CBI23284.3| unnamed protein product [Vitis vinifera]
Length = 303
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 106/179 (59%), Gaps = 27/179 (15%)
Query: 163 GAKRRGGP----------GGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQD 212
GAK+RG GG K+C +SPELQ +G P + RTE+VKQLW +IR+ +LQD
Sbjct: 113 GAKKRGSKKSNKEVKKRGGGFCKLCSLSPELQKFIGVPELARTEVVKQLWVHIREKDLQD 172
Query: 213 PSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLE----------PTKESSKRFKP 262
P+N+R IICD+ LR +F D +MF+MNK L+KHI PL+ P ++ K+ +
Sbjct: 173 PNNRRNIICDETLRALFGVDSINMFQMNKALSKHIWPLDSDDAAPVKPTPKEKQRKQERD 232
Query: 263 DAES---TTEGMESGPSSVI----ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLE 314
D++ + + G S + +S+AL KFL + +AE K++WEYIK N+L+
Sbjct: 233 DSDEPKRKQKRQKGGNSGFLAPLPLSDALVKFLNIEESALSRAEVVKKIWEYIKQNNLQ 291
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISA 339
+S L KF+G E+ + E K++W +I+ L+DP N I+CD LR L G +SI+
Sbjct: 139 LSPELQKFIGVP--ELARTEVVKQLWVHIREKDLQDPNNRRNIICDETLRALFGVDSINM 196
Query: 340 LGIQEMLAR 348
+ + L++
Sbjct: 197 FQMNKALSK 205
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 1 MVSDQEIAKGVETLLRQSDRNASTSLNGVVKQLEAKLGLDLSHKAGFIRDQISLLLRSH 59
MVSD E+ + LR SD N +T+ V ++LE G+DLS K FIR+ + L L+S
Sbjct: 1 MVSDSELVARLHEFLRSSDLNTTTTAI-VRRKLEEDFGIDLSGKKAFIREHVDLFLQSQ 58
>gi|5430749|gb|AAD43149.1|AC007504_4 Hypothetical Protein [Arabidopsis thaliana]
Length = 386
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 81/235 (34%), Positives = 116/235 (49%), Gaps = 50/235 (21%)
Query: 161 PVGAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKII 220
PV AK+RGG G NK+C +SP+L+ +G + RTE+VK++WAYIR+++LQDP+N+R I+
Sbjct: 92 PVKAKKRGG--GFNKICQLSPQLEKFLGTSQLARTEVVKKMWAYIREHDLQDPTNRRNIL 149
Query: 221 CDDALRVVFETDCTDMFKMNKLLAKHIIPLEPTKESSKRFKPDAESTTEGMESGPSSVII 280
CD++L +F +MF+MNK LAKHI L K K + T G E V I
Sbjct: 150 CDESLHSLFRVKTINMFQMNKALAKHIWALNDGDGCFKNVKEEDVDETSG-ERDEKDVKI 208
Query: 281 -------------------------------SEALAKFLG----------------TGGR 293
SE K G TG
Sbjct: 209 EEALENNEEESREEEDRSVRKRKRKKRKPAKSEEKPKKKGGGFTKVCSLSPELQAFTGTP 268
Query: 294 EMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLAR 348
++ + E K +W+YIK N+L+DP + I+CD LR L ESI+ + + LA+
Sbjct: 269 QLARTEVVKMLWKYIKENNLQDPSDKRTIICDESLRSLFPVESINMFQMNKQLAK 323
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 58/116 (50%), Positives = 75/116 (64%), Gaps = 2/116 (1%)
Query: 165 KRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDA 224
K++GG G KVC +SPELQA G P + RTE+VK LW YI++NNLQDPS+KR IICD++
Sbjct: 245 KKKGG--GFTKVCSLSPELQAFTGTPQLARTEVVKMLWKYIKENNLQDPSDKRTIICDES 302
Query: 225 LRVVFETDCTDMFKMNKLLAKHIIPLEPTKESSKRFKPDAESTTEGMESGPSSVII 280
LR +F + +MF+MNK LAKHI PL E+ P+ ME+ V I
Sbjct: 303 LRSLFPVESINMFQMNKQLAKHIWPLVQEDEAGTTNDPEKGKQKMKMETDEVKVNI 358
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 1 MVSDQEIAKGVETLLRQSDRNASTSLNGVVKQLEAKLGLDLSHKAGFIRDQISLLLRS 58
MVSD ++ + +LR SD +T + V +QLE G++L+ K F+R+QI L S
Sbjct: 1 MVSDSDLVTQLREILRSSDLETTTPAS-VRRQLEVYFGVELTDKKAFVREQIDAFLES 57
>gi|42562626|ref|NP_175375.2| SWIB complex BAF60b domain-containing protein [Arabidopsis
thaliana]
gi|63003862|gb|AAY25460.1| At1g49520 [Arabidopsis thaliana]
gi|332194317|gb|AEE32438.1| SWIB complex BAF60b domain-containing protein [Arabidopsis
thaliana]
Length = 372
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 81/235 (34%), Positives = 116/235 (49%), Gaps = 50/235 (21%)
Query: 161 PVGAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKII 220
PV AK+RGG G NK+C +SP+L+ +G + RTE+VK++WAYIR+++LQDP+N+R I+
Sbjct: 92 PVKAKKRGG--GFNKICQLSPQLEKFLGTSQLARTEVVKKMWAYIREHDLQDPTNRRNIL 149
Query: 221 CDDALRVVFETDCTDMFKMNKLLAKHIIPLEPTKESSKRFKPDAESTTEGMESGPSSVII 280
CD++L +F +MF+MNK LAKHI L K K + T G E V I
Sbjct: 150 CDESLHSLFRVKTINMFQMNKALAKHIWALNDGDGCFKNVKEEDVDETSG-ERDEKDVKI 208
Query: 281 -------------------------------SEALAKFLG----------------TGGR 293
SE K G TG
Sbjct: 209 EEALENNEEESREEEDRSVRKRKRKKRKPAKSEEKPKKKGGGFTKVCSLSPELQAFTGTP 268
Query: 294 EMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLAR 348
++ + E K +W+YIK N+L+DP + I+CD LR L ESI+ + + LA+
Sbjct: 269 QLARTEVVKMLWKYIKENNLQDPSDKRTIICDESLRSLFPVESINMFQMNKQLAK 323
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/86 (60%), Positives = 66/86 (76%), Gaps = 2/86 (2%)
Query: 165 KRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDA 224
K++GG G KVC +SPELQA G P + RTE+VK LW YI++NNLQDPS+KR IICD++
Sbjct: 245 KKKGG--GFTKVCSLSPELQAFTGTPQLARTEVVKMLWKYIKENNLQDPSDKRTIICDES 302
Query: 225 LRVVFETDCTDMFKMNKLLAKHIIPL 250
LR +F + +MF+MNK LAKHI PL
Sbjct: 303 LRSLFPVESINMFQMNKQLAKHIWPL 328
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 1 MVSDQEIAKGVETLLRQSDRNASTSLNGVVKQLEAKLGLDLSHKAGFIRDQISLLLRS 58
MVSD ++ + +LR SD +T + V +QLE G++L+ K F+R+QI L S
Sbjct: 1 MVSDSDLVTQLREILRSSDLETTTPAS-VRRQLEVYFGVELTDKKAFVREQIDAFLES 57
>gi|224123268|ref|XP_002330274.1| predicted protein [Populus trichocarpa]
gi|222871309|gb|EEF08440.1| predicted protein [Populus trichocarpa]
Length = 384
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/225 (34%), Positives = 111/225 (49%), Gaps = 47/225 (20%)
Query: 171 GGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFE 230
GG K+ +SP+LQAVVG P + RTE+VK+LWAYIR+NNLQDP N++KI CD+ALR VF
Sbjct: 116 GGFTKLSSLSPQLQAVVGVPELARTEVVKKLWAYIRENNLQDPKNRKKIKCDEALRAVFR 175
Query: 231 TDCTDMFKMNKLLAKHIIPLEPTK-------------ESSKRFKPDAES----------- 266
+ DMF+M+K L+KHI PL E S F + ++
Sbjct: 176 VNSIDMFQMSKALSKHIWPLTGEDGTFFNNVKQKEKCEDSNDFGNEGDNGGEEEEEQEEE 235
Query: 267 --------TTEGMESGPSSVIISEALAKFLG---------------TGGREMLQAEATKR 303
+ + G S + E + K G G E+ + K+
Sbjct: 236 EEEEVKKESNGRSKKGRKSAKVDENVKKRGGGFTKLCSLSPQLQELVGVPELARTGVVKK 295
Query: 304 VWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLAR 348
+W YI+ +L+DP N I+CD LR L +SI + + L++
Sbjct: 296 LWAYIREKNLQDPKNKRNIICDESLRALFDVDSIDMFQMNKALSK 340
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/86 (58%), Positives = 66/86 (76%), Gaps = 2/86 (2%)
Query: 165 KRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDA 224
K+RGG G K+C +SP+LQ +VG P + RT +VK+LWAYIR+ NLQDP NKR IICD++
Sbjct: 262 KKRGG--GFTKLCSLSPQLQELVGVPELARTGVVKKLWAYIREKNLQDPKNKRNIICDES 319
Query: 225 LRVVFETDCTDMFKMNKLLAKHIIPL 250
LR +F+ D DMF+MNK L+KHI +
Sbjct: 320 LRALFDVDSIDMFQMNKALSKHIWAV 345
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 1 MVSDQEIAKGVETLLRQSDRNASTSLNGVVKQLEAKLGLDLSHKAGFIRDQISLLLRSHP 60
MVSD ++ + +LR+SD + +T+ + +QLE LG+DLS K FIR+QI L +
Sbjct: 1 MVSDSDLVTRLREILRRSDLDTATA-GSIRRQLEEDLGVDLSEKKKFIREQIDTFLETFN 59
Query: 61 TPQQVATNT 69
+ + N
Sbjct: 60 GGEGKSENV 68
>gi|302794588|ref|XP_002979058.1| hypothetical protein SELMODRAFT_418723 [Selaginella moellendorffii]
gi|300153376|gb|EFJ20015.1| hypothetical protein SELMODRAFT_418723 [Selaginella moellendorffii]
Length = 292
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 108/194 (55%), Gaps = 8/194 (4%)
Query: 168 GGPGG--LNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIIC-DDA 224
G PG K +SPEL+AV G + R E V+ LW YIR+NNLQDPS+++ I+C +
Sbjct: 93 GTPGNNSFLKAFRLSPELRAVTGHHILRRHEAVQCLWRYIRENNLQDPSDRKMILCAGNK 152
Query: 225 LRVVFETDCTDMFKMNKLLAKHIIPLEPTKESS---KRFKPDAESTTEGMESGPSSVIIS 281
L +F+ D +MF +NK+L H++PLE E K+ K D + + IS
Sbjct: 153 LVDIFKVDSINMFTINKVLQDHLLPLEEGYEDIDMPKKKKLDRSDDRPRRSNFLTPYPIS 212
Query: 282 EALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALG 341
EAL FLGT M +AEA RVWEYI L++P N VI CD KLREL S
Sbjct: 213 EALQSFLGTDRTTMSRAEAVDRVWEYILDKDLQEPGNHNVI-CDDKLRELFKKSHCSHSK 271
Query: 342 IQEMLARNHFLRQS 355
+ +++ R HF+ S
Sbjct: 272 VSQLVNR-HFIDDS 284
>gi|302819723|ref|XP_002991531.1| hypothetical protein SELMODRAFT_429825 [Selaginella moellendorffii]
gi|300140733|gb|EFJ07453.1| hypothetical protein SELMODRAFT_429825 [Selaginella moellendorffii]
Length = 292
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 107/194 (55%), Gaps = 8/194 (4%)
Query: 168 GGPGG--LNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIIC-DDA 224
G PG K +SPEL+AV G + R E V+ LW YIR NNLQDPS+++ I+C +
Sbjct: 93 GAPGNNSFLKAFRLSPELRAVTGHHILRRHEAVQCLWRYIRDNNLQDPSDRKMILCAGNK 152
Query: 225 LRVVFETDCTDMFKMNKLLAKHIIPLEPTKESS---KRFKPDAESTTEGMESGPSSVIIS 281
L VF+ D +MF +NK+L H++PLE E K+ K D + + IS
Sbjct: 153 LFDVFKVDSINMFTINKVLQDHLLPLEEGYEDIDMPKKKKLDRSDDRPRRSNFLTPYPIS 212
Query: 282 EALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALG 341
EAL FLGT M +AEA RVWEYI L++P N V +CD KLREL S
Sbjct: 213 EALQSFLGTDRTTMSRAEAVDRVWEYILDKDLQEPGNHNV-MCDDKLRELFKKSHCSHSK 271
Query: 342 IQEMLARNHFLRQS 355
+ +++ R HF+ S
Sbjct: 272 VSQLVNR-HFVDDS 284
>gi|159488925|ref|XP_001702451.1| SWIB domain-containing protein 1 [Chlamydomonas reinhardtii]
gi|158271119|gb|EDO96946.1| SWIB domain-containing protein 1 [Chlamydomonas reinhardtii]
Length = 275
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 96/186 (51%), Gaps = 20/186 (10%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+S LQA +G ++PRT++VK+LW YI+ NNLQDP +KRKI+ DD L+ +F + T MF
Sbjct: 87 LSEPLQAFLGVESLPRTQVVKRLWEYIKANNLQDPKDKRKILLDDKLKTLFTSPLT-MFT 145
Query: 239 MNKLLAKHIIPL-----EPTKESSKR------------FKPDAESTTEGMESGPSSVIIS 281
MN L+KH+ EP +S+KR K + + + V +S
Sbjct: 146 MNSQLSKHVKVYDGDDEEPKAKSAKRPASKAGKEKPKKVKTEMDEEKRKKNAFTKPVRLS 205
Query: 282 EALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALG 341
LA TG M + E T W Y+K L+DP N I+CDA L+++ G E G
Sbjct: 206 PELAAL--TGKESMGRPEVTSFFWAYVKEKGLKDPANGQFIICDAALKKITGEERFKGFG 263
Query: 342 IQEMLA 347
+ A
Sbjct: 264 FMKYFA 269
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 42/70 (60%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+SPEL A+ G+ +M R E+ WAY+++ L+DP+N + IICD AL+ + + F
Sbjct: 204 LSPELAALTGKESMGRPEVTSFFWAYVKEKGLKDPANGQFIICDAALKKITGEERFKGFG 263
Query: 239 MNKLLAKHII 248
K A H++
Sbjct: 264 FMKYFAPHML 273
>gi|219110293|ref|XP_002176898.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411433|gb|EEC51361.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 294
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 110/199 (55%), Gaps = 14/199 (7%)
Query: 160 PPVGAKRRGGPGGLNKVCGVSPELQAVVGQ-PAMPRTEIVKQLWAYIRKNNLQDPSNKRK 218
P + KR+GG GGL+ +S L +G+ M RT+IVK LW YIR++NLQ+P NK++
Sbjct: 74 PVLKPKRKGG-GGLSAKKEISDALANFLGKGKEMARTDIVKSLWEYIREHNLQNPENKKE 132
Query: 219 IICDDALRVVFETDCTDMFKMNKLLAKHIIPLEPTKESS-------KRFKPDAESTTEGM 271
II DDA+R VF D MF MNK + H+ P + ++ ++ K +++ E
Sbjct: 133 IILDDAMRDVFGCDRFTMFTMNKYIGAHVSPFKAVDLNTNSTPSKPRKRKVSTKASGEKK 192
Query: 272 ESGPSS---VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKL 328
+ P + +S LA+ TG + + + ++WEYIK N L++P + ILCD KL
Sbjct: 193 KRQPGTQPPYRLSAELAEI--TGEAILPRPQVVSKIWEYIKANELQNPSDKREILCDEKL 250
Query: 329 RELLGCESISALGIQEMLA 347
R ++ ++ + + ++
Sbjct: 251 RAVMKKPKVTMFNMNKYIS 269
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 48/70 (68%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+S EL + G+ +PR ++V ++W YI+ N LQ+PS+KR+I+CD+ LR V + MF
Sbjct: 204 LSAELAEITGEAILPRPQVVSKIWEYIKANELQNPSDKREILCDEKLRAVMKKPKVTMFN 263
Query: 239 MNKLLAKHII 248
MNK ++ HI+
Sbjct: 264 MNKYISPHIL 273
>gi|414873008|tpg|DAA51565.1| TPA: hypothetical protein ZEAMMB73_913346, partial [Zea mays]
Length = 249
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 48/87 (55%), Positives = 63/87 (72%), Gaps = 2/87 (2%)
Query: 164 AKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDD 223
K+RGG G K+C +SP LQ VG + RTE+VK+LWAYIR+NNLQD +N+RKI+ D+
Sbjct: 129 GKKRGG--GFTKLCSLSPALQEFVGASELARTEVVKKLWAYIRENNLQDQNNRRKILPDE 186
Query: 224 ALRVVFETDCTDMFKMNKLLAKHIIPL 250
L+ +F + DMF+MNK L KHI PL
Sbjct: 187 RLKKIFNVNSIDMFQMNKALTKHIWPL 213
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 1 MVSDQEIAKGVETLLRQSDRNASTSLNGVVKQLEAKLGLDLSHKAGFIRDQISLLL 56
+VSD E+ + ++ +LR SD N +T+ + ++LE G DLSHK FIR+Q+ L L
Sbjct: 3 LVSDSELVERLQEVLRSSDLNTTTTA-ALRRRLEEDFGADLSHKKAFIREQVDLFL 57
Score = 44.3 bits (103), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISA 339
+S AL +F+G E+ + E K++W YI+ N+L+D N IL D +L+++ SI
Sbjct: 142 LSPALQEFVGAS--ELARTEVVKKLWAYIRENNLQDQNNRRKILPDERLKKIFNVNSIDM 199
Query: 340 LGIQEMLAR 348
+ + L +
Sbjct: 200 FQMNKALTK 208
>gi|302848251|ref|XP_002955658.1| hypothetical protein VOLCADRAFT_106876 [Volvox carteri f.
nagariensis]
gi|300259067|gb|EFJ43298.1| hypothetical protein VOLCADRAFT_106876 [Volvox carteri f.
nagariensis]
Length = 289
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 104/200 (52%), Gaps = 32/200 (16%)
Query: 177 CGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDM 236
C +S LQ +G+ ++PRT++VK+LW YI+ NNLQDP ++R+I+ DD LR +F T M
Sbjct: 87 CLLSEPLQKFLGEESLPRTQVVKRLWDYIKANNLQDPKDRRRILLDDKLRTLFTAPLT-M 145
Query: 237 FKMNKLLAKHIIPLEPTK------ESSKRFKPDAESTTEGMESGPSS------------- 277
F +N L++H L+ + +SS +P ++ G + +
Sbjct: 146 FSINSQLSRHCKTLDAEEPRPRAAKSSGDKRPSSDKPKSGSDKPKAKKAKTGDGEGGDAG 205
Query: 278 ----------VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAK 327
+ +S+ LA + G M +++ TK W Y+K + L+DP N ILCDA
Sbjct: 206 ERKNNNFNKPLRLSKDLASWCGAD--TMGRSDLTKFFWAYVKEHKLQDPSNKQYILCDAH 263
Query: 328 LRELLGCESISALGIQEMLA 347
L+++ G I A IQ+ LA
Sbjct: 264 LKKVTGESRIQAFAIQKYLA 283
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 44/76 (57%)
Query: 173 LNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETD 232
NK +S +L + G M R+++ K WAY++++ LQDPSNK+ I+CD L+ V
Sbjct: 212 FNKPLRLSKDLASWCGADTMGRSDLTKFFWAYVKEHKLQDPSNKQYILCDAHLKKVTGES 271
Query: 233 CTDMFKMNKLLAKHII 248
F + K LA HII
Sbjct: 272 RIQAFAIQKYLAGHII 287
>gi|348690935|gb|EGZ30749.1| hypothetical protein PHYSODRAFT_475850 [Phytophthora sojae]
Length = 383
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 101/209 (48%), Gaps = 34/209 (16%)
Query: 173 LNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETD 232
N +SPEL VVG M R ++VK LWAYIR++NLQDP NK+ I+ DD LR VF+ D
Sbjct: 140 FNAQLCLSPELAQVVGAETMARPQVVKALWAYIREHNLQDPKNKKLILLDDTLRGVFQRD 199
Query: 233 CTDMFKMNKLLAKHI-------------IPLEPTKESSK------------RFKPDAEST 267
MF MNK + +H+ IP + + K A ST
Sbjct: 200 SFTMFSMNKFVKRHVRKPDDMPPGGWSQIPRDGVSSDEDTEAKPAKKKQPAKRKKKAAST 259
Query: 268 TEGMESGP-------SSVIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSM 320
+G + G + + +S LA LG M + E K +W YI ++L+DP +
Sbjct: 260 EDGDDDGKKKANPFYTELAVSPELASLLGRD--RMARPEIVKALWAYIHEHNLQDPQDKR 317
Query: 321 VILCDAKLRELLGCESISALGIQEMLARN 349
IL D ++R++ +S + + + + R+
Sbjct: 318 TILLDDRMRQVFQRDSFTMFSMNKYIKRH 346
>gi|384250769|gb|EIE24248.1| SWIB-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 322
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 99/188 (52%), Gaps = 37/188 (19%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+S +LQA +GQ +MPRTE+VK++W YI+++NLQ+P++KRKII DD L+ +F++ T MF
Sbjct: 117 LSADLQAFLGQESMPRTEVVKKMWEYIKEHNLQNPNDKRKIILDDKLKTIFKSPLT-MFS 175
Query: 239 MNKLLAKHIIPLE-------------------------PTKESSKRFKPDAESTTEGMES 273
MNK L++H+ + P K +KR A+ + + E
Sbjct: 176 MNKQLSRHVYVDDSIGNDEAEEEEEEEDDDKDDDEAPTPKKAPNKRKTGGAQKSGDAKEP 235
Query: 274 GPSSVIISEA---------LAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILC 324
+ + + KFLG M + + K++WEYI+ N+L+DP + IL
Sbjct: 236 KKRRASSNGSGGGSALSAPMQKFLGV--ERMARPQVVKQLWEYIRANNLQDPNDKRTILV 293
Query: 325 DAKLRELL 332
D KL L
Sbjct: 294 DKKLGTLF 301
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 183 LQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKL 242
+Q +G M R ++VKQLW YIR NNLQDP++KR I+ D L +F T+ MF +NK
Sbjct: 255 MQKFLGVERMARPQVVKQLWEYIRANNLQDPNDKRTILVDKKLGTLF-TNPLTMFTLNKQ 313
Query: 243 LAKHII 248
L HI+
Sbjct: 314 LTPHIL 319
>gi|449542129|gb|EMD33109.1| hypothetical protein CERSUDRAFT_142690 [Ceriporiopsis subvermispora
B]
Length = 281
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 79/143 (55%), Gaps = 1/143 (0%)
Query: 105 FALHHPHPHLPQFPQELNFSQPQPSQAAAPPPQPHSNVSKAEAFPQISAEVAKENPPVGA 164
A H Q QELN +P+ S+A SKA + A +
Sbjct: 125 VATAHDEEIARQLSQELN-GRPRSSRATTTKGTKKGGRSKARKSAATVDDDADASGSEKP 183
Query: 165 KRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDA 224
+++ G GGLNK +S L AV+ + R ++VKQLW YI+ NLQ+P+NK++I+CDD+
Sbjct: 184 QKKRGGGGLNKEYTLSEPLAAVLKVEKLSRPQVVKQLWVYIKDRNLQNPANKKEIMCDDS 243
Query: 225 LRVVFETDCTDMFKMNKLLAKHI 247
LR +F TD DMFKMNK+L H+
Sbjct: 244 LRAIFGTDRIDMFKMNKVLGGHL 266
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISA 339
+SE LA L ++ + + K++W YIK +L++P N I+CD LR + G + I
Sbjct: 198 LSEPLAAVLKV--EKLSRPQVVKQLWVYIKDRNLQNPANKKEIMCDDSLRAIFGTDRIDM 255
Query: 340 LGIQEMLA 347
+ ++L
Sbjct: 256 FKMNKVLG 263
>gi|223998538|ref|XP_002288942.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976050|gb|EED94378.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 304
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 97/176 (55%), Gaps = 14/176 (7%)
Query: 173 LNKVCGVSPELQAVVGQPA-MPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFET 231
L V +S +L +G M RTEIVK LW+YI++NNLQ+P NKR+I+ D ++ VF
Sbjct: 80 LQAVKEISEDLANFLGTGRQMARTEIVKALWSYIKENNLQNPENKREIMLDAKMQAVFGV 139
Query: 232 DCTDMFKMNKLLAKHIIPLEP----TKESSKRFKPDAES----TTEGMESGPSS---VII 280
DC +MF MNK ++ HI P + T + K+ K + E E + P S +
Sbjct: 140 DCFNMFTMNKYVSAHIEPYKAVDLTTNSTPKKRKAEGEGGKKKKRERAKQAPGSQAPYRL 199
Query: 281 SEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCES 336
S+ L TG R + + + T+ +W+YI+ N L++P + I CD L ++G ES
Sbjct: 200 SDDLTAV--TGKRILPRPQVTQALWKYIRENGLQNPEDKREINCDELLSRVMGGES 253
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDAL-RVVFETDCTDMF 237
+S +L AV G+ +PR ++ + LW YIR+N LQ+P +KR+I CD+ L RV+ MF
Sbjct: 199 LSDDLTAVTGKRILPRPQVTQALWKYIRENGLQNPEDKREINCDELLSRVMGGESKVTMF 258
Query: 238 KMNKLLAKHII 248
MNK + H++
Sbjct: 259 SMNKYITPHLV 269
>gi|301119559|ref|XP_002907507.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262106019|gb|EEY64071.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 382
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 102/214 (47%), Gaps = 33/214 (15%)
Query: 166 RRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDAL 225
++ G G N +SPEL VVG M R ++VK LWAYIR+++LQDP+NK+ I+ DD L
Sbjct: 133 KKTGGRGFNAQLSLSPELAQVVGAETMARPQVVKALWAYIREHDLQDPNNKKNILLDDTL 192
Query: 226 RVVFETDCTDMFKMNKLLAKHI-IPLEPTKESSKRFKPDAESTTEGMESGPS-------- 276
R VF+ D MF MNK + +H+ P + + D S+ E E+ +
Sbjct: 193 RGVFQRDSFTMFSMNKFVKRHVRKPDDLPPGGWSQIPRDGVSSDEDTEAKAAKKKPAKKK 252
Query: 277 ----------------------SVIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLE 314
+ +S LA TG M + + K +W YI ++L+
Sbjct: 253 KKAASTDDGDDDGKKKKTGFNVELSLSPELASL--TGSDRMARPQIVKALWAYIHEHNLQ 310
Query: 315 DPLNSMVILCDAKLRELLGCESISALGIQEMLAR 348
DP + IL D +++++ +S + + + + R
Sbjct: 311 DPDDKRSILLDDRMKQVFQRDSFTMFSMNKFIKR 344
>gi|17027265|gb|AAL34119.1|AC090713_6 putative parathymosin [Oryza sativa Japonica Group]
Length = 303
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 94/170 (55%), Gaps = 18/170 (10%)
Query: 164 AKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDD 223
KR+GG G K+C +SP LQ VG + RTE+VK+LWAYIR+NNLQDPSNKRKI+
Sbjct: 128 GKRKGG--GFTKLCSISPTLQEFVGASELARTEVVKKLWAYIRENNLQDPSNKRKILIKF 185
Query: 224 ALRVVFET--DCTD--MFKMNKLLAKHIIPL--------EPTKESSKRFKPDAESTTEGM 271
+ + T +C + + L ++H P+ P ++ KR + + + G
Sbjct: 186 LITDEYTTTQNCARALQYIIRFLKSEHGGPVTSASPERSTPKEKPQKRERNEGKKQKGGS 245
Query: 272 ESGPSSVII----SEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPL 317
S ++ S+ L KF+GTG + +++ KR+W+YIK N L+ L
Sbjct: 246 SGSGSGFLVPLQLSDDLVKFIGTGESMLSRSDVVKRMWDYIKENKLQGEL 295
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 1 MVSDQEIAKGVETLLRQSDRNASTSLNGVVKQLEAKLGLDLSHKAGFIRDQISLLL 56
MVSD E+ + + +LR SD N +T+ + ++LE G+DLS K FIR+Q+ LLL
Sbjct: 1 MVSDSELVERLREVLRSSDLNTTTTAI-LRRRLEEDFGVDLSDKKLFIREQVDLLL 55
Score = 38.1 bits (87), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 256 SSKRFKPDAESTTEGMESGPSSVI--ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHL 313
S K+ + D +T + G + + IS L +F+G E+ + E K++W YI+ N+L
Sbjct: 115 SRKKRRSDGANTDGKRKGGGFTKLCSISPTLQEFVGAS--ELARTEVVKKLWAYIRENNL 172
Query: 314 EDPLNSMVIL 323
+DP N IL
Sbjct: 173 QDPSNKRKIL 182
>gi|297741335|emb|CBI32466.3| unnamed protein product [Vitis vinifera]
Length = 122
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 68/103 (66%), Gaps = 3/103 (2%)
Query: 148 FPQISAEVAKENPPVGAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRK 207
F ++ E + + K+RGG NK+C +SP+LQ +VG + ++VK+ W YI++
Sbjct: 6 FLKLKKEKRSDKVVIDVKKRGG---YNKLCSLSPQLQKIVGAAELTGPQVVKKFWTYIQE 62
Query: 208 NNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHIIPL 250
N+LQDP N R IICD++L+ +F D +MF+MNK+L+KH+ L
Sbjct: 63 NSLQDPKNNRNIICDESLQELFHVDSINMFEMNKVLSKHVWQL 105
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%)
Query: 290 TGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLAR 348
G E+ + K+ W YI+ N L+DP N+ I+CD L+EL +SI+ + ++L++
Sbjct: 42 VGAAELTGPQVVKKFWTYIQENSLQDPKNNRNIICDESLQELFHVDSINMFEMNKVLSK 100
>gi|449295490|gb|EMC91512.1| hypothetical protein BAUCODRAFT_127412 [Baudoinia compniacensis
UAMH 10762]
Length = 289
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 65/93 (69%)
Query: 159 NPPVGAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRK 218
N ++ GG NK+ +S LQA++G+ + R + VK++WAY+++ LQDPS+KR+
Sbjct: 195 NTSSATEKTASKGGFNKLLNLSEPLQALLGETQLSRPQTVKRIWAYVKERELQDPSDKRE 254
Query: 219 IICDDALRVVFETDCTDMFKMNKLLAKHIIPLE 251
I CD+ +R VF+++ +MFKMNK+LA+H P+E
Sbjct: 255 IRCDELMRGVFKSERVNMFKMNKVLAQHFFPIE 287
Score = 44.7 bits (104), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISA 339
+SE L LG ++ + + KR+W Y+K L+DP + I CD +R + E ++
Sbjct: 215 LSEPLQALLGET--QLSRPQTVKRIWAYVKERELQDPSDKREIRCDELMRGVFKSERVNM 272
Query: 340 LGIQEMLARNHF 351
+ ++LA++ F
Sbjct: 273 FKMNKVLAQHFF 284
>gi|380092861|emb|CCC09614.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 267
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 59/89 (66%)
Query: 163 GAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICD 222
G K+R GG K +S LQ V G+ + R ++VK+LW +I+ N LQDPS+KR+I+CD
Sbjct: 176 GTKKRKAGGGFQKPFNLSYPLQEVCGEAQLSRPQVVKKLWEHIKANELQDPSDKRQILCD 235
Query: 223 DALRVVFETDCTDMFKMNKLLAKHIIPLE 251
D L+ VF+ +MF+MNKLL + P+E
Sbjct: 236 DKLQAVFKQSSINMFQMNKLLGNQLYPIE 264
Score = 44.3 bits (103), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 302 KRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNHF 351
K++WE+IK N L+DP + ILCD KL+ + SI+ + ++L +
Sbjct: 212 KKLWEHIKANELQDPSDKRQILCDDKLQAVFKQSSINMFQMNKLLGNQLY 261
>gi|448089569|ref|XP_004196842.1| Piso0_004068 [Millerozyma farinosa CBS 7064]
gi|448093864|ref|XP_004197873.1| Piso0_004068 [Millerozyma farinosa CBS 7064]
gi|359378264|emb|CCE84523.1| Piso0_004068 [Millerozyma farinosa CBS 7064]
gi|359379295|emb|CCE83492.1| Piso0_004068 [Millerozyma farinosa CBS 7064]
Length = 214
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 58/92 (63%)
Query: 178 GVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMF 237
VSPELQA++G R +IVKQLWAYI+ NNLQ+P +KRKI CD+ L+ +F+ F
Sbjct: 123 NVSPELQAIIGVEKCSRPQIVKQLWAYIKDNNLQNPEDKRKINCDEKLQTLFKKQSVGAF 182
Query: 238 KMNKLLAKHIIPLEPTKESSKRFKPDAESTTE 269
+MNKLL+ HI E + P E TTE
Sbjct: 183 EMNKLLSSHIFASEEKGSETTESTPVIEETTE 214
Score = 41.6 bits (96), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 32/51 (62%)
Query: 301 TKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNHF 351
K++W YIK N+L++P + I CD KL+ L +S+ A + ++L+ + F
Sbjct: 143 VKQLWAYIKDNNLQNPEDKRKINCDEKLQTLFKKQSVGAFEMNKLLSSHIF 193
>gi|328769562|gb|EGF79606.1| hypothetical protein BATDEDRAFT_89688 [Batrachochytrium
dendrobatidis JAM81]
Length = 321
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 97/198 (48%), Gaps = 29/198 (14%)
Query: 178 GVSPELQAVVGQPA-MPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDM 236
G S L ++G + R ++ KQLW YI+++NLQDP ++R I+CD+ L+ V ++ +M
Sbjct: 118 GTSNSLAQLLGTTDPISRIDLNKQLWHYIKEHNLQDPIDRRFILCDEKLKAVMKSKRVNM 177
Query: 237 FKMNKLLAKHIIP----------------LEPT----KESSKRFKPDAESTTEGMESGPS 276
F MNK L+ H+ +EP K S R K AE +
Sbjct: 178 FSMNKKLSNHLYSDYQFMHKKASLQEQPVVEPKPPKRKRGSDRLKLAAE-----LSPLNE 232
Query: 277 SVIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCES 336
I+S A +G E+ +A+A K +W YIK L+DPLN +I+CD K + + +
Sbjct: 233 PRILSPEFASIVGVS--ELSRAQALKEIWLYIKDKKLQDPLNKRMIICDEKFKNMFKVDQ 290
Query: 337 ISALGIQEMLARNHFLRQ 354
+ + L H +R+
Sbjct: 291 LDMYQMNRGLG-GHMVRK 307
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+SPE ++VG + R + +K++W YI+ LQDP NKR IICD+ + +F+ D DM++
Sbjct: 236 LSPEFASIVGVSELSRAQALKEIWLYIKDKKLQDPLNKRMIICDEKFKNMFKVDQLDMYQ 295
Query: 239 MNKLLAKHIIPLE 251
MN+ L H++ E
Sbjct: 296 MNRGLGGHMVRKE 308
>gi|452825650|gb|EME32645.1| hypothetical protein Gasu_00170 [Galdieria sulphuraria]
Length = 291
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 119/240 (49%), Gaps = 37/240 (15%)
Query: 143 SKAEAFP---QISAEVAKE-NPPVG--AKRRGGPGGLNKVCGVSPELQAVV-GQPAMPRT 195
S+ E P QI ++ K+ NP V + +G GL K V LQ ++ +PRT
Sbjct: 44 SEVELLPLVRQIVVQLLKDANPSVIPLDRVKGFFTGLRKPLKVDKRLQEILQCGSILPRT 103
Query: 196 EIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHI-IPLEPTK 254
+IVK L YI+K+NLQDP K KI+ D+ALR +F + F +NKL++ + IP E +
Sbjct: 104 QIVKYLNQYIKKHNLQDPEQKNKIVLDNALRSLFGVETATFFSLNKLISPFLTIPEEQEQ 163
Query: 255 E-----------------SSKRFKPDAESTTEGMESGPSS---------VIISEALAKFL 288
E + K +S + + G +S + +S L++
Sbjct: 164 EMVHQYMKEHLKEALLAAEESKMKRKQQSKVQSLNKGTTSHRGESLQKPLKLSNLLSQI- 222
Query: 289 GTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELL-GCESISALGIQEMLA 347
G + +++ K+VWEYIK+++L+ + I CDA L++L G E I++ I + L+
Sbjct: 223 -CGAEYLSRSQVVKKVWEYIKLHNLQKASDKRNISCDALLKQLFDGKEEINSFHISKYLS 281
>gi|336467600|gb|EGO55764.1| hypothetical protein NEUTE1DRAFT_131437 [Neurospora tetrasperma
FGSC 2508]
gi|350287747|gb|EGZ68983.1| SWIB-domain-containing protein [Neurospora tetrasperma FGSC 2509]
Length = 265
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 59/89 (66%)
Query: 163 GAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICD 222
G K+R GG K +S LQ V G+ + R ++VK+LW +I+ N LQDPS+KR+IICD
Sbjct: 176 GTKKRKAGGGFQKPFNLSYPLQEVCGEAQLSRPQVVKKLWEHIKANELQDPSDKRQIICD 235
Query: 223 DALRVVFETDCTDMFKMNKLLAKHIIPLE 251
+ L+ VF+ +MF+MNKLL + P+E
Sbjct: 236 EKLQAVFKQSSINMFQMNKLLGNQLYPIE 264
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 35/61 (57%)
Query: 291 GGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNH 350
G ++ + + K++WE+IK N L+DP + I+CD KL+ + SI+ + ++L
Sbjct: 201 GEAQLSRPQVVKKLWEHIKANELQDPSDKRQIICDEKLQAVFKQSSINMFQMNKLLGNQL 260
Query: 351 F 351
+
Sbjct: 261 Y 261
>gi|85092741|ref|XP_959523.1| hypothetical protein NCU02204 [Neurospora crassa OR74A]
gi|28920961|gb|EAA30287.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 265
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 59/89 (66%)
Query: 163 GAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICD 222
G K+R GG K +S LQ V G+ + R ++VK+LW +I+ N LQDPS+KR+IICD
Sbjct: 176 GTKKRKAGGGFQKPFNLSYPLQEVCGEAQLSRPQVVKKLWEHIKANELQDPSDKRQIICD 235
Query: 223 DALRVVFETDCTDMFKMNKLLAKHIIPLE 251
+ L+ VF+ +MF+MNKLL + P+E
Sbjct: 236 EKLQAVFKQSSINMFQMNKLLGNQLYPIE 264
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 30/50 (60%)
Query: 302 KRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNHF 351
K++WE+IK N L+DP + I+CD KL+ + SI+ + ++L +
Sbjct: 212 KKLWEHIKANELQDPSDKRQIICDEKLQAVFKQSSINMFQMNKLLGNQLY 261
>gi|154299113|ref|XP_001549977.1| hypothetical protein BC1G_11869 [Botryotinia fuckeliana B05.10]
gi|347840242|emb|CCD54814.1| hypothetical protein [Botryotinia fuckeliana]
Length = 268
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 59/81 (72%)
Query: 171 GGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFE 230
GG +K +S L +VG+P + R ++VK++W +I+ NLQDPS+KR+IICDD +++VF+
Sbjct: 186 GGFHKQYNLSAALADLVGEPTLSRPQVVKKIWEHIKSLNLQDPSDKRQIICDDKMQLVFK 245
Query: 231 TDCTDMFKMNKLLAKHIIPLE 251
T+ MF MNKLL K + P+E
Sbjct: 246 TERVHMFTMNKLLGKQLYPVE 266
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISA 339
+S ALA +G + + + K++WE+IK +L+DP + I+CD K++ + E +
Sbjct: 194 LSAALADLVGEP--TLSRPQVVKKIWEHIKSLNLQDPSDKRQIICDDKMQLVFKTERVHM 251
Query: 340 LGIQEMLARNHF 351
+ ++L + +
Sbjct: 252 FTMNKLLGKQLY 263
>gi|307111870|gb|EFN60104.1| hypothetical protein CHLNCDRAFT_49597 [Chlorella variabilis]
Length = 453
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 98/229 (42%), Gaps = 52/229 (22%)
Query: 161 PVGAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKII 220
P G KRR G L +SPE+Q +G +PRT++VK+LW YI+++ LQDP +KR II
Sbjct: 226 PSGRKRRAGGSSLGSF--LSPEMQDFLGVERLPRTQVVKRLWEYIKEHGLQDPKDKRTII 283
Query: 221 CDDALRVVFETDCTDMFKMNKLLAKHIIPLE----------------------------- 251
DD L+ +F +MFK+ K L+KH +
Sbjct: 284 FDDKLKTLFTGTKCNMFKLQKHLSKHCKTSDVVGGSDDDEGSEEEGEDDDDEEEEERPPA 343
Query: 252 --------PTKESSKRFKPDAESTTEGMESGPSS----VIISEALAKFLG--TGGREMLQ 297
P S KR E EG E P+ +S +A ++G T R
Sbjct: 344 KKARKAPAPRAASRKRGSSAGE---EGRERKPNGFTKECTLSAEMAAWIGKPTASR---- 396
Query: 298 AEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEML 346
E TK W Y K L+DP + I+ D L+ L G G +++
Sbjct: 397 PEITKFFWAYCKERGLQDPADKSFIVADGALKGLTGEARFKGFGFSKLI 445
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 44/78 (56%)
Query: 170 PGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF 229
P G K C +S E+ A +G+P R EI K WAY ++ LQDP++K I+ D AL+ +
Sbjct: 372 PNGFTKECTLSAEMAAWIGKPTASRPEITKFFWAYCKERGLQDPADKSFIVADGALKGLT 431
Query: 230 ETDCTDMFKMNKLLAKHI 247
F +KL+ +HI
Sbjct: 432 GEARFKGFGFSKLIKEHI 449
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Query: 273 SGPSSV--IISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRE 330
+G SS+ +S + FLG + + + KR+WEYIK + L+DP + I+ D KL+
Sbjct: 233 AGGSSLGSFLSPEMQDFLGV--ERLPRTQVVKRLWEYIKEHGLQDPKDKRTIIFDDKLKT 290
Query: 331 LLGCESISALGIQEMLARN 349
L + +Q+ L+++
Sbjct: 291 LFTGTKCNMFKLQKHLSKH 309
>gi|453081821|gb|EMF09869.1| SWIB-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 275
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 118/276 (42%), Gaps = 54/276 (19%)
Query: 11 VETLLRQSDRNASTSLNGVVKQLEAKLGLDLSHKAGFIRDQISLLLRSHPTPQQVATNTQ 70
++ +LR +D N + S + K+L+ ++G DLS + I D L++ Q+ +
Sbjct: 13 IDEILRTADLN-TISAKRIRKELQEQVGYDLSSQKKAITD---LIMNRFDKAQERQKLAE 68
Query: 71 PQPQPQPQQLPPKDHFTLQHHPQFSLPPQQFPPHFALHHPHPHLPQFPQELNFSQ--PQP 128
P PQ P D+ + SL P F + +EL+ + P P
Sbjct: 69 TAPAPQTNGQPSHDY------AESSLSPTPFANKRKVES---------EELSDVEDSPAP 113
Query: 129 SQAAAPPPQPHSNVSKAEAFPQISAEVAKENPPVGAKRRG-------------------- 168
+ Q +++A A+ GAKR+
Sbjct: 114 KKVKKEKKQETDEEMARRIAQELNATSARSTRGGGAKRKAMVTKAKKPKKKSSAKVNSDD 173
Query: 169 -------------GPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSN 215
GG +K +S L ++G+ + R + VKQ+WAY++ ++QDPS+
Sbjct: 174 DSALESGDKPVKERKGGFHKPMVLSEPLAEMLGETQLSRPQTVKQIWAYVKSRDMQDPSD 233
Query: 216 KRKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLE 251
KR+I+CDD +R VF+ D MF MNKLLA H+ P E
Sbjct: 234 KRQILCDDKMRAVFKADKVHMFTMNKLLASHLYPAE 269
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Query: 278 VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESI 337
+++SE LA+ LG ++ + + K++W Y+K ++DP + ILCD K+R + + +
Sbjct: 195 MVLSEPLAEMLGET--QLSRPQTVKQIWAYVKSRDMQDPSDKRQILCDDKMRAVFKADKV 252
Query: 338 SALGIQEMLARNHF 351
+ ++LA + +
Sbjct: 253 HMFTMNKLLASHLY 266
>gi|408396150|gb|EKJ75315.1| hypothetical protein FPSE_04504 [Fusarium pseudograminearum CS3096]
Length = 260
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 74/125 (59%), Gaps = 5/125 (4%)
Query: 127 QPSQAAAPPPQPHSNVSKAEAFPQISAEVAKENPPVGAKRRGGPGGLNKVCGVSPELQAV 186
+P++ A P + + KA+ +++ + G KR+ G GG K +S L +
Sbjct: 140 KPTKKKAAPRKKSAKKVKADD----DSDLEPADGETGKKRKAG-GGFQKPFNLSETLSEL 194
Query: 187 VGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKH 246
VG+ + R ++VK+LW +I+ N+LQDP +KR+IICDD + VF+ DMFKMNK + H
Sbjct: 195 VGETQLSRPQVVKKLWEHIKANDLQDPKDKRQIICDDKMHAVFKQARVDMFKMNKDIGSH 254
Query: 247 IIPLE 251
+ P+E
Sbjct: 255 LYPVE 259
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 13/88 (14%)
Query: 252 PTKESSKRFKPDAESTTE--GMESGPSSVI---------ISEALAKFLGTGGREMLQAEA 300
P K+S+K+ K D +S E E+G +SE L++ +G ++ + +
Sbjct: 148 PRKKSAKKVKADDDSDLEPADGETGKKRKAGGGFQKPFNLSETLSELVGE--TQLSRPQV 205
Query: 301 TKRVWEYIKVNHLEDPLNSMVILCDAKL 328
K++WE+IK N L+DP + I+CD K+
Sbjct: 206 VKKLWEHIKANDLQDPKDKRQIICDDKM 233
>gi|302681001|ref|XP_003030182.1| hypothetical protein SCHCODRAFT_57454 [Schizophyllum commune H4-8]
gi|300103873|gb|EFI95279.1| hypothetical protein SCHCODRAFT_57454 [Schizophyllum commune H4-8]
Length = 278
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 51/70 (72%)
Query: 178 GVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMF 237
+S L AV+ + + R ++VKQLW YI+ N LQ+PSNKR+I+CDDALR VF TD DMF
Sbjct: 203 ALSEPLSAVLNEQKLSRPQVVKQLWVYIKANELQNPSNKREIVCDDALRRVFNTDKIDMF 262
Query: 238 KMNKLLAKHI 247
KMNK L H+
Sbjct: 263 KMNKELGSHL 272
Score = 41.2 bits (95), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 299 EATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLA 347
+ K++W YIK N L++P N I+CD LR + + I + + L
Sbjct: 221 QVVKQLWVYIKANELQNPSNKREIVCDDALRRVFNTDKIDMFKMNKELG 269
>gi|46122793|ref|XP_385950.1| hypothetical protein FG05774.1 [Gibberella zeae PH-1]
Length = 1121
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 59/90 (65%), Gaps = 1/90 (1%)
Query: 162 VGAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIIC 221
G KR+ G GG K +S L +VG+ + R ++VK+LW +I+ N+LQDP +KR+IIC
Sbjct: 171 TGKKRKAG-GGFQKPFNLSETLSELVGETQLSRPQVVKKLWEHIKANDLQDPKDKRQIIC 229
Query: 222 DDALRVVFETDCTDMFKMNKLLAKHIIPLE 251
DD + VF+ DMFKMNK + H+ P+E
Sbjct: 230 DDKMHAVFKQARVDMFKMNKDIGSHLYPVE 259
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 13/92 (14%)
Query: 252 PTKESSKRFKPDAESTTE--GMESGPSS---------VIISEALAKFLGTGGREMLQAEA 300
P K+S+K+ K D +S E E+G +SE L++ +G ++ + +
Sbjct: 148 PRKKSAKKVKADDDSDLEPADGETGKKRKAGGGFQKPFNLSETLSELVGE--TQLSRPQV 205
Query: 301 TKRVWEYIKVNHLEDPLNSMVILCDAKLRELL 332
K++WE+IK N L+DP + I+CD K+ +
Sbjct: 206 VKKLWEHIKANDLQDPKDKRQIICDDKMHAVF 237
>gi|342887025|gb|EGU86688.1| hypothetical protein FOXB_02794 [Fusarium oxysporum Fo5176]
Length = 262
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 61/89 (68%), Gaps = 1/89 (1%)
Query: 162 VGAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIIC 221
VG KR+ G GG K +S L +VG+ + R ++VK+LW +I+ N+LQDP++KR+IIC
Sbjct: 172 VGKKRKAG-GGFQKPFNLSETLSELVGETQLSRPQVVKKLWEHIKANDLQDPNDKRQIIC 230
Query: 222 DDALRVVFETDCTDMFKMNKLLAKHIIPL 250
DD ++ VF+ DMF+MNK + H+ P+
Sbjct: 231 DDKMQAVFKQARVDMFRMNKDIGSHLYPV 259
Score = 40.8 bits (94), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELL 332
+SE L++ +G ++ + + K++WE+IK N L+DP + I+CD K++ +
Sbjct: 188 LSETLSELVGE--TQLSRPQVVKKLWEHIKANDLQDPNDKRQIICDDKMQAVF 238
>gi|156058185|ref|XP_001595016.1| hypothetical protein SS1G_04824 [Sclerotinia sclerotiorum 1980]
gi|154702609|gb|EDO02348.1| hypothetical protein SS1G_04824 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 265
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 58/81 (71%)
Query: 171 GGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFE 230
GG +K +S L +VG+P + R ++VK++W +I+ ++LQDPS+KR+IICDD +++VF
Sbjct: 183 GGFHKQYNLSAALADLVGEPTLSRPQVVKKIWEHIKAHDLQDPSDKRQIICDDKMQLVFN 242
Query: 231 TDCTDMFKMNKLLAKHIIPLE 251
T MF MNKLL K + P+E
Sbjct: 243 TGKVHMFTMNKLLGKQLYPVE 263
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISA 339
+S ALA +G + + + K++WE+IK + L+DP + I+CD K++ + +
Sbjct: 191 LSAALADLVGEP--TLSRPQVVKKIWEHIKAHDLQDPSDKRQIICDDKMQLVFNTGKVHM 248
Query: 340 LGIQEMLARNHF 351
+ ++L + +
Sbjct: 249 FTMNKLLGKQLY 260
>gi|325186813|emb|CCA21358.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 340
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 99/204 (48%), Gaps = 35/204 (17%)
Query: 178 GVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMF 237
+SPEL AV+G+ M R +IVK+LW YIR+N LQDP++KR+I+ D L+ VF+ + MF
Sbjct: 109 SMSPELAAVMGRDRMSRPQIVKELWNYIRENKLQDPNDKRRIVFDAQLKAVFQREAATMF 168
Query: 238 KMNKLLAKHII-PLEPTKESSKRFKPDAESTTE-------------------GMESGP-- 275
+NK + +H+ P + E + D S+ E + G
Sbjct: 169 SLNKYIKRHVCKPEDLLVEGWQAIPRDGISSEEDGAPKKATSKKKKKRLKKNNSDDGSDP 228
Query: 276 -----------SSVIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILC 324
+ + +S LA+ LG+ + + K +W+YI + L+DP + IL
Sbjct: 229 EKKPKRNSAFNAELAVSPELAQVLGSD--RLARPTIVKLLWKYIHEHQLQDPADKRKILL 286
Query: 325 DAKLRELLGCESISALGIQEMLAR 348
D LR++ +S + + + + R
Sbjct: 287 DDTLRKVFKRDSFTMFSMNKFVKR 310
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 48/77 (62%)
Query: 171 GGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFE 230
N VSPEL V+G + R IVK LW YI ++ LQDP++KRKI+ DD LR VF+
Sbjct: 236 SAFNAELAVSPELAQVLGSDRLARPTIVKLLWKYIHEHQLQDPADKRKILLDDTLRKVFK 295
Query: 231 TDCTDMFKMNKLLAKHI 247
D MF MNK + +H+
Sbjct: 296 RDSFTMFSMNKFVKRHV 312
>gi|389622149|ref|XP_003708728.1| hypothetical protein MGG_01988 [Magnaporthe oryzae 70-15]
gi|351648257|gb|EHA56116.1| hypothetical protein MGG_01988 [Magnaporthe oryzae 70-15]
gi|440465079|gb|ELQ34421.1| hypothetical protein OOU_Y34scaffold00767g25 [Magnaporthe oryzae
Y34]
gi|440481137|gb|ELQ61753.1| hypothetical protein OOW_P131scaffold01155g25 [Magnaporthe oryzae
P131]
Length = 285
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 60/89 (67%)
Query: 163 GAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICD 222
G ++R GG K +S L V G+P + R ++VK+LW +I+ NNLQDP++KR+I+CD
Sbjct: 195 GTQKRKAGGGFQKPFHLSASLAEVCGEPTLSRPQVVKKLWEHIKGNNLQDPNDKRQILCD 254
Query: 223 DALRVVFETDCTDMFKMNKLLAKHIIPLE 251
+ ++ VF+ +MF MNKL+ H+ P++
Sbjct: 255 EKMQAVFKQSSLNMFAMNKLIGSHLYPVD 283
Score = 41.6 bits (96), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 33/53 (62%)
Query: 299 EATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNHF 351
+ K++WE+IK N+L+DP + ILCD K++ + S++ + +++ + +
Sbjct: 228 QVVKKLWEHIKGNNLQDPNDKRQILCDEKMQAVFKQSSLNMFAMNKLIGSHLY 280
>gi|392576961|gb|EIW70091.1| hypothetical protein TREMEDRAFT_38764 [Tremella mesenterica DSM
1558]
Length = 316
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 68/121 (56%), Gaps = 3/121 (2%)
Query: 127 QPSQAAAPPPQPHSNVSKAEAFPQISAEVAKENPPVGAKRRGGPGGLNKVCGVSPELQAV 186
+PS++ A P + + + S + +E G KRR NK +S L A
Sbjct: 146 RPSRSTATPARKKKTIKRKSRARVGSGDEGEER---GKKRRNKNSVFNKEMILSDSLAAF 202
Query: 187 VGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKH 246
+G+P++ R + VK++W Y+++N+LQD +KR I+CDD L+ VF TD MF MNKLL H
Sbjct: 203 IGEPSLSRPQTVKRIWDYVKENDLQDQGDKRYILCDDRLKSVFHTDRLHMFTMNKLLVPH 262
Query: 247 I 247
Sbjct: 263 F 263
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 278 VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESI 337
+I+S++LA F+G + + + KR+W+Y+K N L+D + ILCD +L+ + + +
Sbjct: 193 MILSDSLAAFIGEPS--LSRPQTVKRIWDYVKENDLQDQGDKRYILCDDRLKSVFHTDRL 250
Query: 338 SALGIQEMLARNHF 351
+ ++L HF
Sbjct: 251 HMFTMNKLLV-PHF 263
>gi|220921314|ref|YP_002496615.1| SWIB/MDM2 domain-containing protein [Methylobacterium nodulans ORS
2060]
gi|219945920|gb|ACL56312.1| SWIB/MDM2 domain protein [Methylobacterium nodulans ORS 2060]
Length = 110
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 54/78 (69%)
Query: 170 PGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF 229
P L K SPEL A+VG +PR E+V ++W YIRKN+LQ+P NKR+I+ DD L+ VF
Sbjct: 32 PNALQKPLQPSPELGAIVGTKPIPRGEVVSKVWEYIRKNSLQNPENKREILADDKLKKVF 91
Query: 230 ETDCTDMFKMNKLLAKHI 247
D MF+MNK LA+H+
Sbjct: 92 GKDKATMFEMNKYLAQHL 109
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%)
Query: 290 TGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLAR 348
G + + + E +VWEYI+ N L++P N IL D KL+++ G + + + + LA+
Sbjct: 49 VGTKPIPRGEVVSKVWEYIRKNSLQNPENKREILADDKLKKVFGKDKATMFEMNKYLAQ 107
>gi|452837204|gb|EME39146.1| hypothetical protein DOTSEDRAFT_28327 [Dothistroma septosporum
NZE10]
Length = 293
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 57/85 (67%)
Query: 167 RGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALR 226
R GG +K +S L A++G+ + R + VK++W Y++ +LQ+P +KR+IICDDA+R
Sbjct: 206 REKKGGFHKPMNLSEPLSAMLGETQLSRPQTVKKIWEYVKARDLQNPKDKRQIICDDAMR 265
Query: 227 VVFETDCTDMFKMNKLLAKHIIPLE 251
VF+ D MF MNKLLA H+ P +
Sbjct: 266 AVFKGDSVHMFTMNKLLASHLYPAD 290
Score = 44.3 bits (103), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISA 339
+SE L+ LG ++ + + K++WEY+K L++P + I+CD +R + +S+
Sbjct: 218 LSEPLSAMLGE--TQLSRPQTVKKIWEYVKARDLQNPKDKRQIICDDAMRAVFKGDSVHM 275
Query: 340 LGIQEMLARNHF 351
+ ++LA + +
Sbjct: 276 FTMNKLLASHLY 287
>gi|402076394|gb|EJT71817.1| hypothetical protein GGTG_11070 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 283
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 61/87 (70%), Gaps = 1/87 (1%)
Query: 165 KRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDA 224
KR+ G GG K +S L + G+P + R ++VK+LW +I+ N+LQDP++KR+I+CD+
Sbjct: 196 KRKAG-GGFQKPFSLSHHLALLCGEPVLSRPQVVKKLWEHIKGNDLQDPNDKRQILCDEM 254
Query: 225 LRVVFETDCTDMFKMNKLLAKHIIPLE 251
++ VF+ DMF+MNKL+ H+ P+E
Sbjct: 255 MQAVFKQSKVDMFQMNKLIGNHLYPVE 281
>gi|116200844|ref|XP_001226234.1| hypothetical protein CHGG_10967 [Chaetomium globosum CBS 148.51]
gi|88175681|gb|EAQ83149.1| hypothetical protein CHGG_10967 [Chaetomium globosum CBS 148.51]
Length = 294
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
Query: 165 KRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDA 224
KR+ G GG K +S L V G+ + R ++VK+LW YI+ N+LQDPS+KR+I+CDD
Sbjct: 208 KRKAG-GGFQKPFNLSQPLADVCGESQLSRPQVVKKLWDYIKGNSLQDPSDKRQILCDDK 266
Query: 225 LRVVFETDCTDMFKMNKLLAKHIIPLE 251
L VF+ D +MF MNKLL + P+E
Sbjct: 267 LHAVFKQDKINMFSMNKLLGNQLYPVE 293
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISA 339
+S+ LA G ++ + + K++W+YIK N L+DP + ILCD KL + + I+
Sbjct: 221 LSQPLADVCGES--QLSRPQVVKKLWDYIKGNSLQDPSDKRQILCDDKLHAVFKQDKINM 278
Query: 340 LGIQEMLARNHF 351
+ ++L +
Sbjct: 279 FSMNKLLGNQLY 290
>gi|260947416|ref|XP_002618005.1| hypothetical protein CLUG_01464 [Clavispora lusitaniae ATCC 42720]
gi|238847877|gb|EEQ37341.1| hypothetical protein CLUG_01464 [Clavispora lusitaniae ATCC 42720]
Length = 201
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 52/70 (74%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+SP+LQ+V+G M R ++VKQLW YI+ N LQDP++KRK+ CD+ L+ VF+ MF+
Sbjct: 82 LSPQLQSVLGGSRMSRPQVVKQLWVYIKANGLQDPADKRKVKCDEKLQAVFKKSTVGMFE 141
Query: 239 MNKLLAKHII 248
MNKLL KH+
Sbjct: 142 MNKLLGKHLF 151
Score = 44.7 bits (104), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 34/61 (55%)
Query: 291 GGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNH 350
GG M + + K++W YIK N L+DP + + CD KL+ + ++ + ++L ++
Sbjct: 91 GGSRMSRPQVVKQLWVYIKANGLQDPADKRKVKCDEKLQAVFKKSTVGMFEMNKLLGKHL 150
Query: 351 F 351
F
Sbjct: 151 F 151
>gi|440634031|gb|ELR03950.1| hypothetical protein GMDG_06478 [Geomyces destructans 20631-21]
Length = 275
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 73/119 (61%), Gaps = 9/119 (7%)
Query: 135 PPQPHSNVSKAEAFPQISA------EVAKENPPVGAKRRGGPGGLNKVCGVSPELQAVVG 188
P + S V K ++ ++ A E+ + A+R+GG +K +S L A+VG
Sbjct: 145 PAKAKSTVRKKKSSARVKAADDSDIELNSDGEKKVAERKGG---FHKQYALSEPLAALVG 201
Query: 189 QPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHI 247
+ R ++VK++WA+I+ N+LQDPS+KR+I CD+ +++VF+ D MF MNKLL KH+
Sbjct: 202 ETQSSRPQVVKKIWAHIKGNDLQDPSDKRQIFCDNKMKLVFKQDTVHMFTMNKLLGKHL 260
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 51/109 (46%), Gaps = 13/109 (11%)
Query: 254 KESSKRFKPDAESTTEGMESGPSSVI-----------ISEALAKFLGTGGREMLQAEATK 302
K+SS R K +S E G V +SE LA +G + + + K
Sbjct: 155 KKSSARVKAADDSDIELNSDGEKKVAERKGGFHKQYALSEPLAALVGE--TQSSRPQVVK 212
Query: 303 RVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNHF 351
++W +IK N L+DP + I CD K++ + +++ + ++L ++ +
Sbjct: 213 KIWAHIKGNDLQDPSDKRQIFCDNKMKLVFKQDTVHMFTMNKLLGKHLY 261
>gi|406860532|gb|EKD13590.1| putative SWIB/MDM2 domain-containing protein [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 273
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 59/81 (72%)
Query: 171 GGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFE 230
GG +K +S L V+G+P + R ++VK++W YI+ +LQDP++KR+I+CDD L++VF+
Sbjct: 192 GGFHKQYSLSAPLANVIGEPTLSRPQVVKKIWEYIKARDLQDPADKRQILCDDKLQMVFK 251
Query: 231 TDCTDMFKMNKLLAKHIIPLE 251
T+ MF MNK+L+K + +E
Sbjct: 252 TEKVHMFTMNKILSKQLYDVE 272
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 31/53 (58%)
Query: 299 EATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNHF 351
+ K++WEYIK L+DP + ILCD KL+ + E + + ++L++ +
Sbjct: 217 QVVKKIWEYIKARDLQDPADKRQILCDDKLQMVFKTEKVHMFTMNKILSKQLY 269
>gi|429861652|gb|ELA36327.1| swib mdm2 domain protein [Colletotrichum gloeosporioides Nara gc5]
Length = 268
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
Query: 165 KRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDA 224
KR+ G GG K +S L +VG+ + R ++VK+LW +I+ N+LQDP NKR+I+CDD
Sbjct: 181 KRKAG-GGFQKPFNLSSPLAELVGEQQLSRPQVVKKLWEHIKGNDLQDPENKRQILCDDK 239
Query: 225 LRVVFETDCTDMFKMNKLLAKHIIPLE 251
++ +F+ DMF+MNK++ H+ P+E
Sbjct: 240 MQAIFKVPKVDMFQMNKMIGSHLYPVE 266
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISA 339
+S LA+ +G +++ + + K++WE+IK N L+DP N ILCD K++ + +
Sbjct: 194 LSSPLAELVGE--QQLSRPQVVKKLWEHIKGNDLQDPENKRQILCDDKMQAIFKVPKVDM 251
Query: 340 LGIQEMLARNHF 351
+ +M+ + +
Sbjct: 252 FQMNKMIGSHLY 263
>gi|392561326|gb|EIW54508.1| SWIB-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 267
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 78/136 (57%), Gaps = 8/136 (5%)
Query: 116 QFPQELNFSQPQPSQAAAPPPQPHSNVSKAEAFPQISAEVAKENPPVGA----KRRGGPG 171
Q E+N + + ++A A + + +A+ P+ +A VA + G KRRGG
Sbjct: 127 QLSNEIN-GRGRTARATAAGKKANG-AKRAKKGPKSAATVASDGESEGDEPKPKRRGG-- 182
Query: 172 GLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFET 231
G K +S L A++ + R + VKQLW +I+ NN+Q+P NK++IICDD R +F+
Sbjct: 183 GFTKEYLLSEPLSALLKVERLSRPQTVKQLWNHIKANNMQNPENKKEIICDDGFREIFKV 242
Query: 232 DCTDMFKMNKLLAKHI 247
D DMFKMNK L +H+
Sbjct: 243 DKIDMFKMNKELTQHL 258
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 279 IISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESIS 338
++SE L+ L + + + K++W +IK N++++P N I+CD RE+ + I
Sbjct: 189 LLSEPLSALLKV--ERLSRPQTVKQLWNHIKANNMQNPENKKEIICDDGFREIFKVDKID 246
Query: 339 ALGIQEML 346
+ + L
Sbjct: 247 MFKMNKEL 254
>gi|380492995|emb|CCF34198.1| DEK C terminal domain-containing protein [Colletotrichum
higginsianum]
Length = 266
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 59/87 (67%), Gaps = 1/87 (1%)
Query: 165 KRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDA 224
KR+ G GG K +S L ++G+P + R ++VK+LW +I+ N+LQDP NKR+I CDD
Sbjct: 179 KRKAG-GGFQKPFNLSEPLAELLGEPQLSRPQVVKKLWEHIKGNDLQDPENKRQIRCDDK 237
Query: 225 LRVVFETDCTDMFKMNKLLAKHIIPLE 251
+ +F+ DMF+MNK++ H+ P+E
Sbjct: 238 MHAIFKQSRVDMFQMNKMIGAHLYPVE 264
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISA 339
+SE LA+ LG ++ + + K++WE+IK N L+DP N I CD K+ + +
Sbjct: 192 LSEPLAELLGEP--QLSRPQVVKKLWEHIKGNDLQDPENKRQIRCDDKMHAIFKQSRVDM 249
Query: 340 LGIQEMLA 347
+ +M+
Sbjct: 250 FQMNKMIG 257
>gi|302893631|ref|XP_003045696.1| hypothetical protein NECHADRAFT_33302 [Nectria haematococca mpVI
77-13-4]
gi|256726623|gb|EEU39983.1| hypothetical protein NECHADRAFT_33302 [Nectria haematococca mpVI
77-13-4]
Length = 1112
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Query: 162 VGAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIIC 221
VG KR+ G GG K +S L +VG+ + R ++VK+LW +I+ N+LQDP +KR+IIC
Sbjct: 170 VGKKRKAG-GGFQKPFNLSTTLSELVGETQLSRPQVVKKLWEHIKANDLQDPKDKRQIIC 228
Query: 222 DDALRVVFETDCTDMFKMNKLLAKHIIPL 250
D+ ++ VF+ DMF+MNK + H+ P+
Sbjct: 229 DEKMQAVFKQARVDMFRMNKDIGNHLYPV 257
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELL 332
+S L++ +G ++ + + K++WE+IK N L+DP + I+CD K++ +
Sbjct: 186 LSTTLSELVGE--TQLSRPQVVKKLWEHIKANDLQDPKDKRQIICDEKMQAVF 236
>gi|171680064|ref|XP_001904978.1| hypothetical protein [Podospora anserina S mat+]
gi|170939658|emb|CAP64885.1| unnamed protein product [Podospora anserina S mat+]
Length = 263
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
Query: 165 KRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDA 224
KR+ G GG K +S L V G+P + R ++VK+LW +I+ N LQDP++KR I CD+
Sbjct: 176 KRKAG-GGFQKPFNLSEALADVCGEPQLSRPQVVKKLWDHIKANELQDPNDKRNINCDEK 234
Query: 225 LRVVFETDCTDMFKMNKLLAKHIIPLE 251
LR VF D +MF MNKLL + P+E
Sbjct: 235 LRAVFRQDKINMFSMNKLLGSQLYPIE 261
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 11/98 (11%)
Query: 259 RFKPDAESTTEGMESGPSSVI---------ISEALAKFLGTGGREMLQAEATKRVWEYIK 309
R + D +S E E P +SEALA G ++ + + K++W++IK
Sbjct: 159 RVRSDDDSEVEDGEEKPKRKAGGGFQKPFNLSEALADVCGEP--QLSRPQVVKKLWDHIK 216
Query: 310 VNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLA 347
N L+DP + I CD KLR + + I+ + ++L
Sbjct: 217 ANELQDPNDKRNINCDEKLRAVFRQDKINMFSMNKLLG 254
>gi|354544242|emb|CCE40965.1| hypothetical protein CPAR2_110030 [Candida parapsilosis]
Length = 287
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 59/101 (58%)
Query: 149 PQISAEVAKENPPVGAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKN 208
P+ AK RR N+ +S ELQ V+ Q R ++VK LWAYI+ N
Sbjct: 99 PRTKRRSAKTATSKEKTRRAPNNAFNREMALSHELQNVIAQERCSRPQVVKHLWAYIKDN 158
Query: 209 NLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHIIP 249
NLQ+P++KR+I+CDD L+ +F+ F+MN++L+KHI
Sbjct: 159 NLQNPADKRQIVCDDKLQKLFKKKTVGAFEMNRILSKHIFA 199
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 34/53 (64%)
Query: 299 EATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNHF 351
+ K +W YIK N+L++P + I+CD KL++L +++ A + +L+++ F
Sbjct: 146 QVVKHLWAYIKDNNLQNPADKRQIVCDDKLQKLFKKKTVGAFEMNRILSKHIF 198
>gi|346978000|gb|EGY21452.1| hypothetical protein VDAG_02976 [Verticillium dahliae VdLs.17]
Length = 268
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 59/87 (67%), Gaps = 1/87 (1%)
Query: 165 KRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDA 224
KR+ G GG K +S L ++ +P + R ++VK+LW +I+ NNLQDPSNKR+IICD
Sbjct: 180 KRKPG-GGFQKPFNLSYPLAELLKEPQLSRPQVVKKLWEHIKGNNLQDPSNKRQIICDAP 238
Query: 225 LRVVFETDCTDMFKMNKLLAKHIIPLE 251
+ VF+ DMF+MNKL+ H+ P+E
Sbjct: 239 MEAVFKLPKVDMFQMNKLIGSHLYPVE 265
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 30/53 (56%)
Query: 299 EATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNHF 351
+ K++WE+IK N+L+DP N I+CDA + + + + +++ + +
Sbjct: 210 QVVKKLWEHIKGNNLQDPSNKRQIICDAPMEAVFKLPKVDMFQMNKLIGSHLY 262
>gi|331246146|ref|XP_003335707.1| hypothetical protein PGTG_17145 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309314697|gb|EFP91288.1| hypothetical protein PGTG_17145 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 287
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 62/112 (55%), Gaps = 12/112 (10%)
Query: 152 SAEVAKENPPVGAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQ 211
S K PP + G G++ SP L V+G P R ++VK+LW YI+ N+LQ
Sbjct: 176 SGSAKKPRPPREGEGPGSNRGIHVELNCSPALSNVIGVPVCSRPQVVKKLWEYIKANSLQ 235
Query: 212 DPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEPTKESSKRFKPD 263
+P +KR+I+CD+AL+ VF + MF MNKLLA H+ FKPD
Sbjct: 236 NPQDKRQIMCDEALKKVFNQNSVHMFTMNKLLASHL------------FKPD 275
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 32/53 (60%)
Query: 299 EATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNHF 351
+ K++WEYIK N L++P + I+CD L+++ S+ + ++LA + F
Sbjct: 220 QVVKKLWEYIKANSLQNPQDKRQIMCDEALKKVFNQNSVHMFTMNKLLASHLF 272
>gi|402216656|gb|EJT96741.1| SWIB-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 303
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 55/83 (66%)
Query: 165 KRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDA 224
K++ GG K +SP LQ + G+ A+PR +VK LW +I+ N LQ+P N+++I+CDD
Sbjct: 212 KKKARGGGFQKPYALSPALQELTGETALPRPLVVKALWDHIKANQLQNPQNRKEILCDDK 271
Query: 225 LRVVFETDCTDMFKMNKLLAKHI 247
+R VF DMF+MNK L K++
Sbjct: 272 MRAVFGMQKIDMFRMNKELGKYL 294
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 301 TKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLAR 348
K +W++IK N L++P N ILCD K+R + G + I + + L +
Sbjct: 245 VKALWDHIKANQLQNPQNRKEILCDDKMRAVFGMQKIDMFRMNKELGK 292
>gi|336273172|ref|XP_003351341.1| hypothetical protein SMAC_03646 [Sordaria macrospora k-hell]
Length = 262
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%), Gaps = 5/89 (5%)
Query: 163 GAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICD 222
G K+R GG K +S LQ V G+ ++VK+LW +I+ N LQDPS+KR+I+CD
Sbjct: 176 GTKKRKAGGGFQKPFNLSYPLQEVCGE-----AQVVKKLWEHIKANELQDPSDKRQILCD 230
Query: 223 DALRVVFETDCTDMFKMNKLLAKHIIPLE 251
D L+ VF+ +MF+MNKLL + P+E
Sbjct: 231 DKLQAVFKQSSINMFQMNKLLGNQLYPIE 259
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 297 QAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNHF 351
+A+ K++WE+IK N L+DP + ILCD KL+ + SI+ + ++L +
Sbjct: 202 EAQVVKKLWEHIKANELQDPSDKRQILCDDKLQAVFKQSSINMFQMNKLLGNQLY 256
>gi|29839931|ref|NP_829037.1| BAF60b domain-containing protein [Chlamydophila caviae GPIC]
gi|29834278|gb|AAP04915.1| BAF60b domain protein [Chlamydophila caviae GPIC]
Length = 87
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 55/73 (75%), Gaps = 1/73 (1%)
Query: 177 CGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFET-DCTD 235
++P+L A+VG+ MPRTEIVK++W +I+KNNLQDP NKR I+ DDAL VF + + D
Sbjct: 14 VNITPDLAAIVGEGPMPRTEIVKKVWEHIKKNNLQDPKNKRNILPDDALAKVFGSKNPID 73
Query: 236 MFKMNKLLAKHII 248
MF+M K L+ HI+
Sbjct: 74 MFQMTKALSAHIV 86
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 278 VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCES 336
V I+ LA +G G M + E K+VWE+IK N+L+DP N IL D L ++ G ++
Sbjct: 14 VNITPDLAAIVGEG--PMPRTEIVKKVWEHIKKNNLQDPKNKRNILPDDALAKVFGSKN 70
>gi|398394521|ref|XP_003850719.1| hypothetical protein MYCGRDRAFT_100770 [Zymoseptoria tritici
IPO323]
gi|339470598|gb|EGP85695.1| hypothetical protein MYCGRDRAFT_100770 [Zymoseptoria tritici
IPO323]
Length = 297
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 60/81 (74%)
Query: 171 GGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFE 230
GG +K +S L A++G+ + R + VK++WAY+++ +LQ+P++KR+I CD+A+R VF+
Sbjct: 209 GGFHKPMHLSEPLAAMLGENQLSRPQTVKRIWAYVKERDLQEPTDKRQINCDEAMRAVFK 268
Query: 231 TDCTDMFKMNKLLAKHIIPLE 251
+D MF MNKLL +H+ P+E
Sbjct: 269 SDKVHMFTMNKLLVQHLWPVE 289
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISA 339
+SE LA LG ++ + + KR+W Y+K L++P + I CD +R + + +
Sbjct: 217 LSEPLAAMLGEN--QLSRPQTVKRIWAYVKERDLQEPTDKRQINCDEAMRAVFKSDKVHM 274
Query: 340 LGIQEML 346
+ ++L
Sbjct: 275 FTMNKLL 281
>gi|302420957|ref|XP_003008309.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
gi|261353960|gb|EEY16388.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
Length = 268
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 59/87 (67%), Gaps = 1/87 (1%)
Query: 165 KRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDA 224
KR+ G GG K +S L ++ +P + R ++VK+LW +I+ NNLQDP+NKR+IICD
Sbjct: 180 KRKPG-GGFQKPFNLSYPLAELLKEPQLSRPQVVKKLWEHIKGNNLQDPANKRQIICDAP 238
Query: 225 LRVVFETDCTDMFKMNKLLAKHIIPLE 251
+ VF+ DMF+MNKL+ H+ P+E
Sbjct: 239 MEAVFKLPKVDMFQMNKLIGSHLYPVE 265
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 21/28 (75%)
Query: 299 EATKRVWEYIKVNHLEDPLNSMVILCDA 326
+ K++WE+IK N+L+DP N I+CDA
Sbjct: 210 QVVKKLWEHIKGNNLQDPANKRQIICDA 237
>gi|406695566|gb|EKC98869.1| hypothetical protein A1Q2_06840 [Trichosporon asahii var. asahii
CBS 8904]
Length = 227
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
Query: 150 QISAEVAKENPPVGAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNN 209
+++++ +E P KR GG G NK +S L A V + + R + VK++W YI+ N+
Sbjct: 118 RVASDSDEEQPK--KKRGGGGGAFNKELLLSDTLSAFVNETKLSRPQTVKRIWDYIKAND 175
Query: 210 LQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHI 247
LQDP++KR I+CDD ++ VF TD MF MNKLLA+H
Sbjct: 176 LQDPNDKRYILCDDKMKTVFHTDKLHMFTMNKLLAEHF 213
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 278 VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESI 337
+++S+ L+ F+ ++ + + KR+W+YIK N L+DP + ILCD K++ + + +
Sbjct: 143 LLLSDTLSAFVNET--KLSRPQTVKRIWDYIKANDLQDPNDKRYILCDDKMKTVFHTDKL 200
Query: 338 SALGIQEMLARNHF 351
+ ++LA HF
Sbjct: 201 HMFTMNKLLA-EHF 213
>gi|383640982|ref|ZP_09953388.1| SWIB/MDM2 domain-containing protein [Sphingomonas elodea ATCC
31461]
Length = 85
Score = 85.9 bits (211), Expect = 3e-14, Method: Composition-based stats.
Identities = 41/77 (53%), Positives = 56/77 (72%)
Query: 171 GGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFE 230
GG+ K SPEL +VG +PR+EIV ++W YI+KNNLQ+P+NKR+I+ DD L+ +F
Sbjct: 8 GGIAKPVTPSPELAKIVGTADLPRSEIVSKVWEYIKKNNLQNPANKREILADDTLKPIFG 67
Query: 231 TDCTDMFKMNKLLAKHI 247
D MF+MNK LAKH+
Sbjct: 68 GDKATMFEMNKHLAKHV 84
Score = 45.1 bits (105), Expect = 0.053, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Query: 264 AESTTEGMESGPSSVIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVIL 323
AE+ G + P V S LAK +GT ++ ++E +VWEYIK N+L++P N IL
Sbjct: 2 AETKARGGIAKP--VTPSPELAKIVGTA--DLPRSEIVSKVWEYIKKNNLQNPANKREIL 57
Query: 324 CDAKLRELLGCESISALGIQEMLARN 349
D L+ + G + + + + LA++
Sbjct: 58 ADDTLKPIFGGDKATMFEMNKHLAKH 83
>gi|396458098|ref|XP_003833662.1| similar to SWIB/MDM2 domain-containing protein [Leptosphaeria
maculans JN3]
gi|312210210|emb|CBX90297.1| similar to SWIB/MDM2 domain-containing protein [Leptosphaeria
maculans JN3]
Length = 285
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 58/83 (69%)
Query: 171 GGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFE 230
GG +K +SP L ++G+ + R + VK++W Y+++ +LQDP++KR+I CDDA+R VF+
Sbjct: 202 GGFHKPMALSPALSELLGETQLSRPQTVKKIWEYVKERDLQDPADKRQIRCDDAMRAVFK 261
Query: 231 TDCTDMFKMNKLLAKHIIPLEPT 253
D MF MNK+L +++ +E T
Sbjct: 262 QDRVHMFTMNKILNQNLYAVEET 284
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 278 VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESI 337
+ +S AL++ LG ++ + + K++WEY+K L+DP + I CD +R + + +
Sbjct: 208 MALSPALSELLGET--QLSRPQTVKKIWEYVKERDLQDPADKRQIRCDDAMRAVFKQDRV 265
Query: 338 SALGIQEMLARNHF 351
+ ++L +N +
Sbjct: 266 HMFTMNKILNQNLY 279
>gi|448520198|ref|XP_003868247.1| Tri1 protein [Candida orthopsilosis Co 90-125]
gi|380352586|emb|CCG22813.1| Tri1 protein [Candida orthopsilosis]
Length = 265
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 59/91 (64%)
Query: 166 RRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDAL 225
+R N+ +S ELQ V+ + R ++VK LWAYI+ NNLQ+P++KR+IICDD L
Sbjct: 116 KRAPNNAFNREMALSHELQNVIARERCSRPQVVKHLWAYIKGNNLQNPADKRQIICDDKL 175
Query: 226 RVVFETDCTDMFKMNKLLAKHIIPLEPTKES 256
+ +F+ F+MN++L+KHI + +++
Sbjct: 176 QKLFKKKTVGAFEMNRILSKHIFVFDDIEDN 206
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 66/129 (51%), Gaps = 4/129 (3%)
Query: 228 VFETDCTDMFKMNKLLAKHIIPLEPTKE-SSKRFKPDAESTTEGMESGPSSVIISE-ALA 285
V + D +M + + LLA + E ++ +KR +T E + P++ E AL+
Sbjct: 71 VKKRDRDEMERQDALLAAKLSRQESARQPRTKRKATKVSTTKEKTKRAPNNAFNREMALS 130
Query: 286 KFL-GTGGREMLQA-EATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQ 343
L RE + K +W YIK N+L++P + I+CD KL++L +++ A +
Sbjct: 131 HELQNVIARERCSRPQVVKHLWAYIKGNNLQNPADKRQIICDDKLQKLFKKKTVGAFEMN 190
Query: 344 EMLARNHFL 352
+L+++ F+
Sbjct: 191 RILSKHIFV 199
>gi|401885774|gb|EJT49862.1| hypothetical protein A1Q1_01014 [Trichosporon asahii var. asahii
CBS 2479]
Length = 251
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
Query: 150 QISAEVAKENPPVGAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNN 209
+++++ +E P KR GG G NK +S L A V + + R + VK++W YI+ N+
Sbjct: 142 RVASDSDEEQPK--KKRGGGGGAFNKELLLSDTLSAFVNETKLSRPQTVKRIWDYIKAND 199
Query: 210 LQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHI 247
LQDP++KR I+CDD ++ VF TD MF MNKLLA+H
Sbjct: 200 LQDPNDKRYILCDDKMKTVFHTDKLHMFTMNKLLAEHF 237
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 278 VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESI 337
+++S+ L+ F+ ++ + + KR+W+YIK N L+DP + ILCD K++ + + +
Sbjct: 167 LLLSDTLSAFVNET--KLSRPQTVKRIWDYIKANDLQDPNDKRYILCDDKMKTVFHTDKL 224
Query: 338 SALGIQEMLARNHF 351
+ ++LA HF
Sbjct: 225 HMFTMNKLLA-EHF 237
>gi|240142382|ref|YP_002966892.1| hypothetical protein MexAM1_META2p0707 [Methylobacterium extorquens
AM1]
gi|418059176|ref|ZP_12697132.1| SWIB/MDM2 domain-containing protein [Methylobacterium extorquens
DSM 13060]
gi|240012326|gb|ACS43551.1| conserved hypothetical protein [Methylobacterium extorquens AM1]
gi|373567298|gb|EHP93271.1| SWIB/MDM2 domain-containing protein [Methylobacterium extorquens
DSM 13060]
Length = 100
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 54/78 (69%)
Query: 170 PGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF 229
P GL + S EL A+VG +PR E+V ++W +I+KNNLQ+P NKR+I+ D+ L+ VF
Sbjct: 21 PNGLQQPLKPSAELAAIVGDKPLPRGEVVSKVWEHIKKNNLQNPQNKREIVADEKLKKVF 80
Query: 230 ETDCTDMFKMNKLLAKHI 247
D MF+MNK LAKH+
Sbjct: 81 GVDKCSMFEMNKHLAKHL 98
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 35/59 (59%)
Query: 290 TGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLAR 348
G + + + E +VWE+IK N+L++P N I+ D KL+++ G + S + + LA+
Sbjct: 38 VGDKPLPRGEVVSKVWEHIKKNNLQNPQNKREIVADEKLKKVFGVDKCSMFEMNKHLAK 96
>gi|170739254|ref|YP_001767909.1| SWIB/MDM2 domain-containing protein [Methylobacterium sp. 4-46]
gi|168193528|gb|ACA15475.1| SWIB/MDM2 domain protein [Methylobacterium sp. 4-46]
Length = 120
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 56/83 (67%), Gaps = 2/83 (2%)
Query: 167 RGG--PGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDA 224
+GG P L K SPEL A+VG +PR E+V ++W YIR ++LQ+P NKR+I+ DD
Sbjct: 37 KGGDKPNALQKPLQPSPELGAIVGTKPIPRGEVVSKVWDYIRTHSLQNPENKREILADDK 96
Query: 225 LRVVFETDCTDMFKMNKLLAKHI 247
L+ VF D MF+MNK LA+H+
Sbjct: 97 LKKVFGKDKATMFEMNKYLAQHL 119
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 34/59 (57%)
Query: 290 TGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLAR 348
G + + + E +VW+YI+ + L++P N IL D KL+++ G + + + + LA+
Sbjct: 59 VGTKPIPRGEVVSKVWDYIRTHSLQNPENKREILADDKLKKVFGKDKATMFEMNKYLAQ 117
>gi|358400889|gb|EHK50204.1| hypothetical protein TRIATDRAFT_211488 [Trichoderma atroviride IMI
206040]
Length = 1158
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 58/87 (66%)
Query: 165 KRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDA 224
K+R GG K +S L A+ G+ + R ++VK+LW +I+ N+LQDP++KR+I CD+
Sbjct: 178 KKRKAGGGFQKPFNLSETLSALCGETQLSRPQVVKKLWEHIKANDLQDPADKRQIRCDEK 237
Query: 225 LRVVFETDCTDMFKMNKLLAKHIIPLE 251
++ VF+ DMF+MNK + H+ P+E
Sbjct: 238 MQAVFKQAKVDMFRMNKDIGSHLYPVE 264
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELL 332
+SE L+ G ++ + + K++WE+IK N L+DP + I CD K++ +
Sbjct: 192 LSETLSALCGE--TQLSRPQVVKKLWEHIKANDLQDPADKRQIRCDEKMQAVF 242
>gi|58264838|ref|XP_569575.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|57225807|gb|AAW42268.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 252
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 61/105 (58%), Gaps = 8/105 (7%)
Query: 149 PQISAEVAKENPPVGAKR------RGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLW 202
P+ A + E G K+ RGG NK +S L +VG ++ R ++VK +W
Sbjct: 143 PKSHAHIDNETEKNGDKKDDTKTKRGG--AFNKELLLSDSLAELVGSHSLSRPQVVKHIW 200
Query: 203 AYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHI 247
AY+++ NLQD +++R I+CDD LR VF TD MF MNK+L H+
Sbjct: 201 AYVKERNLQDSNDRRYILCDDKLREVFHTDRLHMFTMNKILVNHL 245
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 278 VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESI 337
+++S++LA+ +G+ + + + K +W Y+K +L+D + ILCD KLRE+ + +
Sbjct: 175 LLLSDSLAELVGSHS--LSRPQVVKHIWAYVKERNLQDSNDRRYILCDDKLREVFHTDRL 232
Query: 338 SALGIQEMLARNHF 351
+ ++L NH
Sbjct: 233 HMFTMNKILV-NHL 245
>gi|389743867|gb|EIM85051.1| SWIB-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 271
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 52/70 (74%)
Query: 183 LQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKL 242
LQAV+ M R ++VKQLW YI+ N++Q+P+NK++I+CD+ R +F D DMFKMNK+
Sbjct: 202 LQAVLQVDKMARPQVVKQLWVYIKANDMQNPANKKEIVCDEKFRAMFNVDKIDMFKMNKV 261
Query: 243 LAKHIIPLEP 252
L++H+ EP
Sbjct: 262 LSEHLHEPEP 271
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 30/53 (56%)
Query: 295 MLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLA 347
M + + K++W YIK N +++P N I+CD K R + + I + ++L+
Sbjct: 211 MARPQVVKQLWVYIKANDMQNPANKKEIVCDEKFRAMFNVDKIDMFKMNKVLS 263
>gi|341057669|gb|EGS24100.1| hypothetical protein CTHT_0000310 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 240
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 59/87 (67%), Gaps = 1/87 (1%)
Query: 165 KRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDA 224
KR+ G GG K +S LQ + G+ + R ++VK+LW YI++ +LQDP++KR+IICD
Sbjct: 154 KRKAG-GGFQKPFNLSYPLQELTGETQLSRPQVVKKLWDYIKEKDLQDPNDKRQIICDSK 212
Query: 225 LRVVFETDCTDMFKMNKLLAKHIIPLE 251
L+ +F+ + +MF MNKLL + P++
Sbjct: 213 LQAIFKQEKINMFSMNKLLGNQLYPID 239
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 36/62 (58%)
Query: 290 TGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARN 349
TG ++ + + K++W+YIK L+DP + I+CD+KL+ + E I+ + ++L
Sbjct: 175 TGETQLSRPQVVKKLWDYIKEKDLQDPNDKRQIICDSKLQAIFKQEKINMFSMNKLLGNQ 234
Query: 350 HF 351
+
Sbjct: 235 LY 236
>gi|170097958|ref|XP_001880198.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164644636|gb|EDR08885.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 272
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 52/80 (65%)
Query: 168 GGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRV 227
G GG K +S L AV+ + R ++VKQLW YI+ N LQ+P NKR+I+CD L+
Sbjct: 188 GAKGGFAKEFLLSEPLAAVLQVNKLSRPQVVKQLWVYIKGNELQNPENKREIMCDVNLKA 247
Query: 228 VFETDCTDMFKMNKLLAKHI 247
VF D DMFKMNK+L +H+
Sbjct: 248 VFGVDKIDMFKMNKVLGQHL 267
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 279 IISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESIS 338
++SE LA L ++ + + K++W YIK N L++P N I+CD L+ + G + I
Sbjct: 198 LLSEPLAAVLQVN--KLSRPQVVKQLWVYIKGNELQNPENKREIMCDVNLKAVFGVDKID 255
Query: 339 ALGIQEMLA 347
+ ++L
Sbjct: 256 MFKMNKVLG 264
>gi|134109669|ref|XP_776513.1| hypothetical protein CNBC4390 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259191|gb|EAL21866.1| hypothetical protein CNBC4390 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 254
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 61/105 (58%), Gaps = 8/105 (7%)
Query: 149 PQISAEVAKENPPVGAKR------RGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLW 202
P+ A + E G K+ RGG NK +S L +VG ++ R ++VK +W
Sbjct: 145 PKSHAHIDNETEKNGDKKDDTKTKRGG--AFNKELLLSDSLAELVGSHSLSRPQVVKHIW 202
Query: 203 AYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHI 247
AY+++ NLQD +++R I+CDD LR VF TD MF MNK+L H+
Sbjct: 203 AYVKERNLQDSNDRRYILCDDKLREVFHTDRLHMFTMNKILVNHL 247
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 278 VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESI 337
+++S++LA+ +G+ + + + K +W Y+K +L+D + ILCD KLRE+ + +
Sbjct: 177 LLLSDSLAELVGSHS--LSRPQVVKHIWAYVKERNLQDSNDRRYILCDDKLREVFHTDRL 234
Query: 338 SALGIQEMLARNHF 351
+ ++L NH
Sbjct: 235 HMFTMNKILV-NHL 247
>gi|345567828|gb|EGX50730.1| hypothetical protein AOL_s00054g816 [Arthrobotrys oligospora ATCC
24927]
Length = 289
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 70/123 (56%), Gaps = 9/123 (7%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+SP+L ++G+ + R E VK++WAYI++N+LQD ++KR IICD+ LR VF T MF
Sbjct: 176 LSPQLSTLLGETQLSRPETVKRIWAYIKQNDLQDQNDKRYIICDENLRTVFPTAKVHMFT 235
Query: 239 MNKLLAKHIIPLEPTKESSKRFKPDAESTTEGMESGPSSVIISEALAKFLGTGGREMLQA 298
MNK+L+ H+ P+ + D +S E S P S A F G L++
Sbjct: 236 MNKILSGHLYPMNKADNIADVKTEDIKS--EDFASSPVS-------AAFSHQGSPSSLES 286
Query: 299 EAT 301
EA+
Sbjct: 287 EAS 289
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 278 VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESI 337
+I+S L+ LG ++ + E KR+W YIK N L+D + I+CD LR + +
Sbjct: 174 LILSPQLSTLLGET--QLSRPETVKRIWAYIKQNDLQDQNDKRYIICDENLRTVFPTAKV 231
Query: 338 SALGIQEMLA 347
+ ++L+
Sbjct: 232 HMFTMNKILS 241
>gi|388569327|ref|ZP_10155726.1| SWIB/MDM2 domain-containing protein [Hydrogenophaga sp. PBC]
gi|388263453|gb|EIK89044.1| SWIB/MDM2 domain-containing protein [Hydrogenophaga sp. PBC]
Length = 85
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 49/76 (64%)
Query: 172 GLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFET 231
N+ SPEL AV+G PRTE+VK +W YI+ NNLQ+P NKR I+ D L+ VF
Sbjct: 9 AFNRALKPSPELAAVIGSTPQPRTEVVKLMWEYIKANNLQNPKNKRNILADAKLKAVFGK 68
Query: 232 DCTDMFKMNKLLAKHI 247
D +MF+M L+ KH+
Sbjct: 69 DEVNMFEMTGLVGKHL 84
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 32/52 (61%)
Query: 297 QAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLAR 348
+ E K +WEYIK N+L++P N IL DAKL+ + G + ++ + ++ +
Sbjct: 31 RTEVVKLMWEYIKANNLQNPKNKRNILADAKLKAVFGKDEVNMFEMTGLVGK 82
>gi|170749922|ref|YP_001756182.1| SWIB/MDM2 domain-containing protein [Methylobacterium radiotolerans
JCM 2831]
gi|170656444|gb|ACB25499.1| SWIB/MDM2 domain protein [Methylobacterium radiotolerans JCM 2831]
Length = 119
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 49/68 (72%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
S EL A+VG +PR E+V ++W YI+KNNLQ+P NKR+I+ DD L+ VF D MF+M
Sbjct: 50 SAELGAIVGTSPLPRGEVVSKVWDYIKKNNLQNPQNKREIVADDKLKKVFGKDKCSMFEM 109
Query: 240 NKLLAKHI 247
NK LA H+
Sbjct: 110 NKHLAAHL 117
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 31/51 (60%)
Query: 297 QAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLA 347
+ E +VW+YIK N+L++P N I+ D KL+++ G + S + + LA
Sbjct: 64 RGEVVSKVWDYIKKNNLQNPQNKREIVADDKLKKVFGKDKCSMFEMNKHLA 114
>gi|367032092|ref|XP_003665329.1| hypothetical protein MYCTH_2308924 [Myceliophthora thermophila ATCC
42464]
gi|347012600|gb|AEO60084.1| hypothetical protein MYCTH_2308924 [Myceliophthora thermophila ATCC
42464]
Length = 264
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Query: 165 KRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDA 224
KR+ G GG K +S L + G+ + R ++VK+LW YI++N LQDP++KR+I CD+
Sbjct: 178 KRKAG-GGFQKPFNLSEPLANLCGESQLSRPQVVKKLWDYIKENGLQDPNDKRQIRCDEK 236
Query: 225 LRVVFETDCTDMFKMNKLLAKHIIPLE 251
L VF+ D +MF MNKLL + P+E
Sbjct: 237 LHAVFKQDKINMFSMNKLLGNQLYPVE 263
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISA 339
+SE LA G ++ + + K++W+YIK N L+DP + I CD KL + + I+
Sbjct: 191 LSEPLANLCGES--QLSRPQVVKKLWDYIKENGLQDPNDKRQIRCDEKLHAVFKQDKINM 248
Query: 340 LGIQEMLARNHF 351
+ ++L +
Sbjct: 249 FSMNKLLGNQLY 260
>gi|322696254|gb|EFY88049.1| SWIB/MDM2 domain protein [Metarhizium acridum CQMa 102]
Length = 261
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 56/88 (63%)
Query: 163 GAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICD 222
G K+R GG K +S L + G+ + R ++VK+LW +I+ N+LQDP++KR+I CD
Sbjct: 171 GVKKRKAGGGFQKPFNLSSTLSDICGETQLSRPQVVKRLWEHIKANDLQDPADKRQIRCD 230
Query: 223 DALRVVFETDCTDMFKMNKLLAKHIIPL 250
++ VF+ DMFKMNK + H+ P+
Sbjct: 231 AKMQAVFKQARVDMFKMNKEIGNHLYPV 258
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 14/112 (12%)
Query: 252 PTKESSKRFKPDAESTTEGMESGPSSVIISEALAKFLG-----------TGGREMLQAEA 300
P K+SSK+ + D +S G SG S V +A F G ++ + +
Sbjct: 148 PRKKSSKKVRDDEDSDVNG--SGESGVKKRKAGGGFQKPFNLSSTLSDICGETQLSRPQV 205
Query: 301 TKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNHFL 352
KR+WE+IK N L+DP + I CDAK++ + + + + + NH
Sbjct: 206 VKRLWEHIKANDLQDPADKRQIRCDAKMQAVFKQARVDMFKMNKEIG-NHLY 256
>gi|395493643|ref|ZP_10425222.1| hypothetical protein SPAM26_17494 [Sphingomonas sp. PAMC 26617]
gi|404253972|ref|ZP_10957940.1| hypothetical protein SPAM266_11940 [Sphingomonas sp. PAMC 26621]
Length = 93
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 55/77 (71%)
Query: 171 GGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFE 230
GG+ SPEL A+VG +PR+E++ ++W YI+K++LQ+P NKR+I+ D+AL+ VF
Sbjct: 15 GGIFAPIQPSPELGAIVGNDRLPRSEVISKVWEYIKKHDLQNPENKREIVADEALKKVFG 74
Query: 231 TDCTDMFKMNKLLAKHI 247
D MF+MNK LA H+
Sbjct: 75 KDRVTMFEMNKHLAGHM 91
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 290 TGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLA 347
G + ++E +VWEYIK + L++P N I+ D L+++ G + ++ + + LA
Sbjct: 31 VGNDRLPRSEVISKVWEYIKKHDLQNPENKREIVADEALKKVFGKDRVTMFEMNKHLA 88
>gi|322705010|gb|EFY96599.1| SWIB/MDM2 domain protein [Metarhizium anisopliae ARSEF 23]
Length = 281
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 56/88 (63%)
Query: 163 GAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICD 222
G K+R GG K +S L + G+ + R ++VK+LW +I+ N+LQDP++KR+I CD
Sbjct: 191 GVKKRKAGGGFQKPFNLSSTLSDICGETQLSRPQVVKKLWEHIKANDLQDPADKRQIRCD 250
Query: 223 DALRVVFETDCTDMFKMNKLLAKHIIPL 250
++ VF+ DMFKMNK + H+ P+
Sbjct: 251 AKMQAVFKQARVDMFKMNKEIGNHLYPV 278
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 14/112 (12%)
Query: 252 PTKESSKRFKPDAESTTEGMESGPSSVIISEALAKFLG-----------TGGREMLQAEA 300
P K+SSK+ + D +S G SG S V +A F G ++ + +
Sbjct: 168 PRKKSSKKVRDDDDSDVNG--SGESGVKKRKAGGGFQKPFNLSSTLSDICGETQLSRPQV 225
Query: 301 TKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNHFL 352
K++WE+IK N L+DP + I CDAK++ + + + + + NH
Sbjct: 226 VKKLWEHIKANDLQDPADKRQIRCDAKMQAVFKQARVDMFKMNKEIG-NHLY 276
>gi|321253712|ref|XP_003192826.1| hypothetical protein CGB_C4270C [Cryptococcus gattii WM276]
gi|317459295|gb|ADV21039.1| conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 252
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 51/77 (66%)
Query: 171 GGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFE 230
G NK +S L +VG ++ R ++VK +WAY+++ NLQD ++KR I+CDD LR +F
Sbjct: 169 GAFNKELLLSGALADLVGTHSLSRPQVVKHIWAYVKERNLQDSNDKRYILCDDKLREIFH 228
Query: 231 TDCTDMFKMNKLLAKHI 247
TD MF MNK+L H+
Sbjct: 229 TDRLHMFTMNKILVNHL 245
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 278 VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESI 337
+++S ALA +GT + + + K +W Y+K +L+D + ILCD KLRE+ + +
Sbjct: 175 LLLSGALADLVGTHS--LSRPQVVKHIWAYVKERNLQDSNDKRYILCDDKLREIFHTDRL 232
Query: 338 SALGIQEMLARNHF 351
+ ++L NH
Sbjct: 233 HMFTMNKILV-NHL 245
>gi|169847147|ref|XP_001830285.1| hypothetical protein CC1G_01921 [Coprinopsis cinerea okayama7#130]
gi|116508537|gb|EAU91432.1| hypothetical protein CC1G_01921 [Coprinopsis cinerea okayama7#130]
Length = 276
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 183 LQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKL 242
L AVV M R ++VKQLW YI+ N+LQ+P NKR+I+CD +L+ VF D DMF MNK+
Sbjct: 207 LSAVVQAEKMSRPQVVKQLWEYIKGNDLQNPKNKREIMCDASLKAVFNRDKIDMFAMNKV 266
Query: 243 LAKHI 247
L +H+
Sbjct: 267 LGQHL 271
Score = 45.1 bits (105), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 279 IISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESIS 338
I+SE L+ + +M + + K++WEYIK N L++P N I+CDA L+ + + I
Sbjct: 202 ILSEPLSAVVQ--AEKMSRPQVVKQLWEYIKGNDLQNPKNKREIMCDASLKAVFNRDKID 259
Query: 339 ALGIQEMLA 347
+ ++L
Sbjct: 260 MFAMNKVLG 268
>gi|89898650|ref|YP_515760.1| swiB complex protein [Chlamydophila felis Fe/C-56]
gi|89332022|dbj|BAE81615.1| swiB complex protein [Chlamydophila felis Fe/C-56]
Length = 87
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 55/73 (75%), Gaps = 1/73 (1%)
Query: 177 CGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFET-DCTD 235
VS +L+A+VG+ MPRTEIVK++W +I+K+NLQDP NKR I+ DDAL VF + + D
Sbjct: 14 VNVSADLEAIVGKGPMPRTEIVKKVWEHIKKHNLQDPKNKRNILPDDALAKVFGSKNPID 73
Query: 236 MFKMNKLLAKHII 248
MF+M K L+ HI+
Sbjct: 74 MFQMTKALSSHIV 86
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 278 VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCES 336
V +S L +G G M + E K+VWE+IK ++L+DP N IL D L ++ G ++
Sbjct: 14 VNVSADLEAIVGKG--PMPRTEIVKKVWEHIKKHNLQDPKNKRNILPDDALAKVFGSKN 70
>gi|50294301|ref|XP_449562.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528876|emb|CAG62538.1| unnamed protein product [Candida glabrata]
Length = 233
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 64/98 (65%), Gaps = 4/98 (4%)
Query: 163 GAKRRGGPG--GLNKV-CGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKI 219
G K+ P +N + +S +L +G+ +PRT++VKQ+W YI+++NLQ P ++R+I
Sbjct: 122 GEKKVANPNSNAINSMKLRLSDDLYKFLGERELPRTQVVKQVWDYIKEHNLQSPEDRREI 181
Query: 220 ICDDALRVVFETDCTDMFKMNKLLAKHIIPLEPTKESS 257
ICDD +R +F T MF +NK+L+KH+ +EP E +
Sbjct: 182 ICDDRMRPIFGDKMT-MFALNKILSKHLTKIEPKSEEA 218
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 45/69 (65%), Gaps = 3/69 (4%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISA 339
+S+ L KFLG RE+ + + K+VW+YIK ++L+ P + I+CD ++R + G + ++
Sbjct: 141 LSDDLYKFLGE--RELPRTQVVKQVWDYIKEHNLQSPEDRREIICDDRMRPIFG-DKMTM 197
Query: 340 LGIQEMLAR 348
+ ++L++
Sbjct: 198 FALNKILSK 206
>gi|358380180|gb|EHK17858.1| hypothetical protein TRIVIDRAFT_80752 [Trichoderma virens Gv29-8]
Length = 266
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
Query: 165 KRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDA 224
KR+ G GG K +SP L + G+ + R ++VK+LW +I+ N+LQDP +KR+I CD+
Sbjct: 180 KRKAG-GGFQKPFILSPTLSELCGETQLSRPQVVKKLWEHIKANDLQDPKDKRQIRCDEK 238
Query: 225 LRVVFETDCTDMFKMNKLLAKHIIPLE 251
++ VF+ DMF+MNK + H+ P+E
Sbjct: 239 MQAVFKQAKVDMFRMNKDIGSHLYPVE 265
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 279 IISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELL 332
I+S L++ G ++ + + K++WE+IK N L+DP + I CD K++ +
Sbjct: 192 ILSPTLSELCGE--TQLSRPQVVKKLWEHIKANDLQDPKDKRQIRCDEKMQAVF 243
>gi|393222641|gb|EJD08125.1| SWIB-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 370
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 53/73 (72%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+S L A++ + R ++VKQLW YI+ N+LQ+PSN+R+I+CDD LR VF D DMF+
Sbjct: 298 LSAPLSALLEVDRLSRPQVVKQLWEYIKGNDLQNPSNRREILCDDRLRPVFNADKIDMFR 357
Query: 239 MNKLLAKHIIPLE 251
MNK+L +H+ +E
Sbjct: 358 MNKVLGQHLHEVE 370
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 299 EATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLA 347
+ K++WEYIK N L++P N ILCD +LR + + I + ++L
Sbjct: 315 QVVKQLWEYIKGNDLQNPSNRREILCDDRLRPVFNADKIDMFRMNKVLG 363
>gi|341883933|gb|EGT39868.1| hypothetical protein CAEBREN_00740 [Caenorhabditis brenneri]
Length = 371
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 57/100 (57%), Gaps = 1/100 (1%)
Query: 157 KENPPVGAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
KE P A G G + K+C +SPELQ V M R ++VK LW YI +N+L+DP NK
Sbjct: 174 KEKDP-NADNSGKFGPMTKLCYISPELQQVTKDQWMKRCDVVKVLWEYINENDLKDPKNK 232
Query: 217 RKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEPTKES 256
+ IICDD L+ +F+ F M K L HII L ++
Sbjct: 233 QFIICDDILQSIFKRKKVKAFGMVKFLTGHIIGLNDMRDD 272
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 295 MLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEML 346
M + + K +WEYI N L+DP N I+CD L+ + + + A G+ + L
Sbjct: 208 MKRCDVVKVLWEYINENDLKDPKNKQFIICDDILQSIFKRKKVKAFGMVKFL 259
>gi|297802548|ref|XP_002869158.1| hypothetical protein ARALYDRAFT_491238 [Arabidopsis lyrata subsp.
lyrata]
gi|297314994|gb|EFH45417.1| hypothetical protein ARALYDRAFT_491238 [Arabidopsis lyrata subsp.
lyrata]
Length = 144
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
Query: 152 SAEVAKENPPVGAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQ 211
SA A +P K R P G+ K VSPE+Q VVG P +PRT+ +K++WAYI++++LQ
Sbjct: 48 SATAASSDPTTTTKTRE-PRGIMKPRPVSPEMQDVVGVPEIPRTQALKRIWAYIKEHDLQ 106
Query: 212 DPSNKRKIICDDALRVVFE-TDCTDMFKMNKLLAKHII 248
DP NKR IICD+ L+ +FE + ++ KL+ H +
Sbjct: 107 DPQNKRDIICDEKLKKIFEGKERVGFLEIAKLIGPHFL 144
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 291 GGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELL-GCESISALGIQEMLARN 349
G E+ + +A KR+W YIK + L+DP N I+CD KL+++ G E + L I +++
Sbjct: 83 GVPEIPRTQALKRIWAYIKEHDLQDPQNKRDIICDEKLKKIFEGKERVGFLEIAKLIG-P 141
Query: 350 HFL 352
HFL
Sbjct: 142 HFL 144
>gi|413932997|gb|AFW67548.1| SWIb domain-containing protein [Zea mays]
Length = 145
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
Query: 163 GAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICD 222
A ++ G+ + VSP LQA+VG P +PRTE++K+LWAYI+++NLQDPS+K+ ++CD
Sbjct: 58 AAPKKKRATGITQPKSVSPALQAIVGDPVIPRTEVLKRLWAYIKEHNLQDPSDKKVVVCD 117
Query: 223 DALRVVFE-TDCTDMFKMNKLLAKHII 248
+ L+V+F + ++ KLL H +
Sbjct: 118 EKLKVLFAGRERVGFLEIAKLLNPHFV 144
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Query: 297 QAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELL-GCESISALGIQEMLARNHFLR 353
+ E KR+W YIK ++L+DP + V++CD KL+ L G E + L I ++L HF++
Sbjct: 89 RTEVLKRLWAYIKEHNLQDPSDKKVVVCDEKLKVLFAGRERVGFLEIAKLL-NPHFVK 145
>gi|46204853|ref|ZP_00049390.2| COG5531: SWIB-domain-containing proteins implicated in chromatin
remodeling [Magnetospirillum magnetotacticum MS-1]
Length = 106
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 53/78 (67%)
Query: 170 PGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF 229
P L + SPEL A+VG +PR E+V ++W +I+K+NLQ+P NKR+I+ DD L+ +F
Sbjct: 27 PNALQQPLKPSPELAAIVGDKPLPRGEVVSKVWEHIKKHNLQNPENKREIVADDKLKKIF 86
Query: 230 ETDCTDMFKMNKLLAKHI 247
D MF+MNK LA H+
Sbjct: 87 GKDKCSMFEMNKHLAAHL 104
Score = 41.6 bits (96), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 34/57 (59%)
Query: 291 GGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLA 347
G + + + E +VWE+IK ++L++P N I+ D KL+++ G + S + + LA
Sbjct: 45 GDKPLPRGEVVSKVWEHIKKHNLQNPENKREIVADDKLKKIFGKDKCSMFEMNKHLA 101
>gi|226228476|ref|YP_002762582.1| hypothetical protein GAU_3070 [Gemmatimonas aurantiaca T-27]
gi|226091667|dbj|BAH40112.1| hypothetical protein GAU_3070 [Gemmatimonas aurantiaca T-27]
Length = 140
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCT-DMFK 238
S +L A+VG +PRTE+VK+LWAYI+KNNLQD +NKR I DD L+VVF T MF
Sbjct: 71 SSDLAAIVGDKPLPRTEVVKKLWAYIKKNNLQDKTNKRNINADDKLKVVFGGKKTVSMFD 130
Query: 239 MNKLLAKHI 247
M KL++ H+
Sbjct: 131 MTKLVSAHL 139
>gi|393234600|gb|EJD42161.1| SWIB-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 295
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 48/60 (80%)
Query: 192 MPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLE 251
M RT++VK+LW +IR ++LQ+P+N+R+IICD ++R VF+ D DMF MNKLL H+ PLE
Sbjct: 235 MSRTQVVKKLWEHIRAHDLQNPANRRQIICDPSMRAVFKQDKVDMFTMNKLLKDHLSPLE 294
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 278 VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESI 337
+++SE LA + T M + + K++WE+I+ + L++P N I+CD +R + + +
Sbjct: 220 MMLSEPLAHLMQTD--RMSRTQVVKKLWEHIRAHDLQNPANRRQIICDPSMRAVFKQDKV 277
Query: 338 SALGIQEMLARNHF 351
+ ++L ++H
Sbjct: 278 DMFTMNKLL-KDHL 290
>gi|242032907|ref|XP_002463848.1| hypothetical protein SORBIDRAFT_01g007350 [Sorghum bicolor]
gi|241917702|gb|EER90846.1| hypothetical protein SORBIDRAFT_01g007350 [Sorghum bicolor]
Length = 143
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 57/78 (73%), Gaps = 1/78 (1%)
Query: 172 GLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFE- 230
G+ + VSP LQA+VG+P +PRTE +K+LWAYI+++NLQDPS+K+ +ICD+ L+V+F
Sbjct: 65 GITQPKPVSPALQAIVGEPVIPRTEALKRLWAYIKEHNLQDPSDKKVVICDEKLKVLFAG 124
Query: 231 TDCTDMFKMNKLLAKHII 248
+ ++ KLL H +
Sbjct: 125 RERVGFLEIAKLLNPHFV 142
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 297 QAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELL-GCESISALGIQEMLARNHFLR 353
+ EA KR+W YIK ++L+DP + V++CD KL+ L G E + L I ++L HF++
Sbjct: 87 RTEALKRLWAYIKEHNLQDPSDKKVVICDEKLKVLFAGRERVGFLEIAKLL-NPHFVK 143
>gi|50304323|ref|XP_452111.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641243|emb|CAH02504.1| KLLA0B13024p [Kluyveromyces lactis]
Length = 124
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 56/76 (73%), Gaps = 1/76 (1%)
Query: 175 KVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCT 234
K G+SPELQ + MPRT++VK +W YI++++LQ+P ++R+IICDDA++ +F T
Sbjct: 33 KKVGLSPELQEFLKVEEMPRTQVVKSVWDYIKEHDLQNPEDRREIICDDAMKPIFGEKMT 92
Query: 235 DMFKMNKLLAKHIIPL 250
MF +NK+L+KH+ L
Sbjct: 93 -MFTLNKILSKHLFNL 107
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 278 VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESI 337
V +S L +FL EM + + K VW+YIK + L++P + I+CD ++ + G E +
Sbjct: 35 VGLSPELQEFLKV--EEMPRTQVVKSVWDYIKEHDLQNPEDRREIICDDAMKPIFG-EKM 91
Query: 338 SALGIQEMLARNHF 351
+ + ++L+++ F
Sbjct: 92 TMFTLNKILSKHLF 105
>gi|320165673|gb|EFW42572.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 612
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 68/107 (63%), Gaps = 2/107 (1%)
Query: 160 PPVGAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKI 219
P K RGG GG +K GVSPEL A++G +PR++++K+LW I++ NLQDP+NK+ I
Sbjct: 473 PAAEGKSRGGGGGFSKPVGVSPELAALLGASELPRSQVIKKLWVIIKERNLQDPTNKQFI 532
Query: 220 ICDDALRVVFETDCTDMFKMNKLLAKHIIPLEPTKESSKRFKPDAES 266
+CD L + MFKM + + +HI PL +KE+ ++ AE+
Sbjct: 533 LCDPQLEAIIGKPRVQMFKMTREIERHIHPL--SKEAIAAYRAKAEA 577
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 56/97 (57%)
Query: 165 KRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDA 224
+R G NK +SP L A+VG P M R ++V ++W ++ NLQDP ++R I C+DA
Sbjct: 292 QRARGWAASNKDMELSPALAALVGAPQMARPKVVSKIWEIVKAENLQDPDDRRYIRCNDA 351
Query: 225 LRVVFETDCTDMFKMNKLLAKHIIPLEPTKESSKRFK 261
++ VF + MF MNK+L+ HI T + R K
Sbjct: 352 MKAVFGSARVHMFSMNKVLSDHIFKNGETTSTKSRVK 388
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 278 VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLG 333
V +S LA LG E+ +++ K++W IK +L+DP N ILCD +L ++G
Sbjct: 490 VGVSPELAALLGAS--ELPRSQVIKKLWVIIKERNLQDPTNKQFILCDPQLEAIIG 543
Score = 38.5 bits (88), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 17/72 (23%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISA 339
+S ALA +G +M + + ++WE +K +L+DP + I C+ ++ + G +
Sbjct: 306 LSPALAALVGAP--QMARPKVVSKIWEIVKAENLQDPDDRRYIRCNDAMKAVFGSARVHM 363
Query: 340 LGIQEMLARNHF 351
+ ++L+ + F
Sbjct: 364 FSMNKVLSDHIF 375
>gi|268572225|ref|XP_002641267.1| Hypothetical protein CBG05179 [Caenorhabditis briggsae]
Length = 324
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 61/119 (51%), Gaps = 4/119 (3%)
Query: 130 QAAAPPPQPHSNVSKAEAFPQISAEVAKENPPVGAKRRGGPGGLNKVCGVSPELQAVVGQ 189
+AAA S F + S +V N + G G + K+C +S ELQ +
Sbjct: 135 RAAASDALKSIRTSAGGRFVKKSTKVKDPNADMS----GKFGPMTKLCYISTELQQITKD 190
Query: 190 PAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHII 248
M R ++VK LW YI+ NNL+DP N + IICDD +R +F + F M K L KHII
Sbjct: 191 QWMKRCDVVKVLWDYIKANNLKDPKNGQFIICDDVMRSIFNKNRFKGFGMAKFLTKHII 249
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 31/59 (52%)
Query: 290 TGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLAR 348
T + M + + K +W+YIK N+L+DP N I+CD +R + G+ + L +
Sbjct: 188 TKDQWMKRCDVVKVLWDYIKANNLKDPKNGQFIICDDVMRSIFNKNRFKGFGMAKFLTK 246
>gi|400597714|gb|EJP65444.1| DEK C terminal domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 286
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Query: 165 KRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDA 224
KR+ G GG K +S L + G+ + R ++VK+LW +I+ N LQDP +KR+I+CDD
Sbjct: 199 KRKAG-GGFQKPFNLSDSLSVLCGETQLSRPQVVKKLWEHIKANELQDPKDKRQILCDDR 257
Query: 225 LRVVFETDCTDMFKMNKLLAKHIIPL 250
+ VF DMFKMNK + +H+ P+
Sbjct: 258 MFAVFRQPRVDMFKMNKEIGQHLYPV 283
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKL 328
+S++L+ G ++ + + K++WE+IK N L+DP + ILCD ++
Sbjct: 212 LSDSLSVLCGE--TQLSRPQVVKKLWEHIKANELQDPKDKRQILCDDRM 258
>gi|388521631|gb|AFK48877.1| unknown [Medicago truncatula]
Length = 182
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 100/206 (48%), Gaps = 41/206 (19%)
Query: 2 VSDQEIAKGVETLLRQSD--RNASTSLNGVVKQLEAKLG-LDLSHKAGFIRDQISLLLRS 58
V+++EI + +L +++ T+LN VV +L++KLG DL+HK FI +QI+LL +
Sbjct: 4 VTEEEICSAIHSLFTETNPRTRTFTTLNQVVSELQSKLGGYDLTHKIDFITEQINLLFAA 63
Query: 59 HPTPQQVATNTQPQPQPQPQ----------QLPPKDHFTLQHHPQFSLPPQQFPPHFALH 108
QQ + Q Q Q KDHFTL
Sbjct: 64 SSQHQQQHVHHHQQQQLQQPPPPQQQPQLISFERKDHFTL-------------------- 103
Query: 109 HPHPHLPQFPQELNFSQPQPSQAAAPPPQPHSNVSKAEAFPQISAEVAKENPPVGAKRRG 168
H +P+ P F +AA ++VS A P+ E A+ P KRRG
Sbjct: 104 HQNPNSHSVPVTSAFRNNVVVSSAAVADASVAHVS-ANVLPK---ESAQPKP----KRRG 155
Query: 169 GPGGLNKVCGVSPELQAVVGQPAMPR 194
GPGGLNK+CGVSPELQ +VGQPAMP+
Sbjct: 156 GPGGLNKLCGVSPELQVIVGQPAMPK 181
>gi|166154674|ref|YP_001654792.1| hypothetical protein CTL0720 [Chlamydia trachomatis 434/Bu]
gi|166155549|ref|YP_001653804.1| hypothetical protein CTLon_0716 [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|301335944|ref|ZP_07224188.1| hypothetical protein CtraL_03925 [Chlamydia trachomatis L2tet1]
gi|339626139|ref|YP_004717618.1| SWIB/MDM2 domain-containing protein [Chlamydia trachomatis L2c]
gi|165930662|emb|CAP04159.1| conserved hypothetical protein [Chlamydia trachomatis 434/Bu]
gi|165931537|emb|CAP07113.1| conserved hypothetical protein [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|339460482|gb|AEJ76985.1| SWIB/MDM2 domain protein [Chlamydia trachomatis L2c]
gi|440526269|emb|CCP51753.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L2b/8200/07]
gi|440536094|emb|CCP61607.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L2b/795]
gi|440540547|emb|CCP66061.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L2/25667R]
gi|440542322|emb|CCP67836.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L2b/UCH-2]
gi|440543213|emb|CCP68727.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L2b/Canada2]
gi|440544104|emb|CCP69618.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L2b/LST]
gi|440544994|emb|CCP70508.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L2b/Ams1]
gi|440545884|emb|CCP71398.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L2b/CV204]
gi|440914146|emb|CCP90563.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L2b/Ams2]
gi|440915036|emb|CCP91453.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L2b/Ams3]
gi|440915927|emb|CCP92344.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L2b/Canada1]
gi|440916822|emb|CCP93239.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L2b/Ams4]
gi|440917712|emb|CCP94129.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L2b/Ams5]
Length = 86
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 54/73 (73%), Gaps = 1/73 (1%)
Query: 177 CGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDC-TD 235
VS +L A+VG MPRTEI+K++W YI++N+LQDP+NKR I DD L VF T+ D
Sbjct: 13 VNVSADLAAIVGAGPMPRTEIIKKMWDYIKENSLQDPTNKRNINPDDKLAKVFGTEKPID 72
Query: 236 MFKMNKLLAKHII 248
MF+M K++++HII
Sbjct: 73 MFQMTKMVSQHII 85
Score = 44.3 bits (103), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 278 VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCES- 336
V +S LA +G G M + E K++W+YIK N L+DP N I D KL ++ G E
Sbjct: 13 VNVSADLAAIVGAG--PMPRTEIIKKMWDYIKENSLQDPTNKRNINPDDKLAKVFGTEKP 70
Query: 337 ISALGIQEMLARNHFLR 353
I + +M+++ H ++
Sbjct: 71 IDMFQMTKMVSQ-HIIK 86
>gi|188582565|ref|YP_001926010.1| SWIB/MDM2 domain-containing protein [Methylobacterium populi BJ001]
gi|179346063|gb|ACB81475.1| SWIB/MDM2 domain protein [Methylobacterium populi BJ001]
Length = 110
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 53/78 (67%)
Query: 170 PGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF 229
P L + SPEL A+VG +PR E+V ++W +I+K+NLQ+P NKR+I+ DD L+ +F
Sbjct: 31 PNALQQPLKPSPELAAIVGDKPLPRGEVVSKVWEHIKKHNLQNPENKREIVADDKLKKIF 90
Query: 230 ETDCTDMFKMNKLLAKHI 247
D MF+MNK LA H+
Sbjct: 91 GKDKCSMFEMNKHLAAHL 108
Score = 40.8 bits (94), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 34/57 (59%)
Query: 291 GGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLA 347
G + + + E +VWE+IK ++L++P N I+ D KL+++ G + S + + LA
Sbjct: 49 GDKPLPRGEVVSKVWEHIKKHNLQNPENKREIVADDKLKKIFGKDKCSMFEMNKHLA 105
>gi|163852543|ref|YP_001640586.1| SWIB/MDM2 domain-containing protein [Methylobacterium extorquens
PA1]
gi|218531380|ref|YP_002422196.1| SWIB/MDM2 domain-containing protein [Methylobacterium extorquens
CM4]
gi|240139877|ref|YP_002964354.1| hypothetical protein MexAM1_META1p3340 [Methylobacterium extorquens
AM1]
gi|254562299|ref|YP_003069394.1| hypothetical protein METDI3911 [Methylobacterium extorquens DM4]
gi|418058520|ref|ZP_12696492.1| SWIB/MDM2 domain-containing protein [Methylobacterium extorquens
DSM 13060]
gi|163664148|gb|ABY31515.1| SWIB/MDM2 domain protein [Methylobacterium extorquens PA1]
gi|218523683|gb|ACK84268.1| SWIB/MDM2 domain protein [Methylobacterium extorquens CM4]
gi|240009851|gb|ACS41077.1| conserved hypothetical protein [Methylobacterium extorquens AM1]
gi|254269577|emb|CAX25547.1| conserved hypothetical protein [Methylobacterium extorquens DM4]
gi|373567944|gb|EHP93901.1| SWIB/MDM2 domain-containing protein [Methylobacterium extorquens
DSM 13060]
Length = 110
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 53/78 (67%)
Query: 170 PGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF 229
P L + SPEL A+VG +PR E+V ++W +I+K+NLQ+P NKR+I+ DD L+ +F
Sbjct: 31 PNALQQPLKPSPELAAIVGDNPLPRGEVVSKVWEHIKKHNLQNPENKREILADDKLKKIF 90
Query: 230 ETDCTDMFKMNKLLAKHI 247
D MF+MNK LA H+
Sbjct: 91 GKDKCSMFEMNKHLAAHL 108
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%)
Query: 291 GGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLA 347
G + + E +VWE+IK ++L++P N IL D KL+++ G + S + + LA
Sbjct: 49 GDNPLPRGEVVSKVWEHIKKHNLQNPENKREILADDKLKKIFGKDKCSMFEMNKHLA 105
>gi|338734173|ref|YP_004672646.1| DNA topoisomerase 1 [Simkania negevensis Z]
gi|336483556|emb|CCB90155.1| DNA topoisomerase 1 [Simkania negevensis Z]
Length = 840
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 57/86 (66%), Gaps = 4/86 (4%)
Query: 163 GAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICD 222
G KR GG G K+ S ELQAVVG+ + R E+ K++W YI+ +NLQDPSNKR I+ D
Sbjct: 757 GGKRAGGSGRAKKL---SKELQAVVGEKELTRGEVTKKIWEYIKSHNLQDPSNKRLIVPD 813
Query: 223 DALRVVF-ETDCTDMFKMNKLLAKHI 247
+ L VF ++ DMFK+ +L KHI
Sbjct: 814 EKLEKVFGNSEPLDMFKLAGVLGKHI 839
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 31/44 (70%)
Query: 290 TGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLG 333
G +E+ + E TK++WEYIK ++L+DP N +I+ D KL ++ G
Sbjct: 778 VGEKELTRGEVTKKIWEYIKSHNLQDPSNKRLIVPDEKLEKVFG 821
>gi|330936328|ref|XP_003305343.1| hypothetical protein PTT_18158 [Pyrenophora teres f. teres 0-1]
gi|311317686|gb|EFQ86572.1| hypothetical protein PTT_18158 [Pyrenophora teres f. teres 0-1]
Length = 283
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 55/81 (67%)
Query: 171 GGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFE 230
GG +K +SP L ++G+ + R + VK++W Y++ LQDPS+KR+I CDDA+R VF+
Sbjct: 199 GGFHKPMALSPALSELLGETQLSRPQTVKKIWEYVKARELQDPSDKRQIRCDDAMRAVFK 258
Query: 231 TDCTDMFKMNKLLAKHIIPLE 251
D MF MNK+L +++ ++
Sbjct: 259 QDRVHMFTMNKILNQNLYAVD 279
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISA 339
+S AL++ LG ++ + + K++WEY+K L+DP + I CD +R + + +
Sbjct: 207 LSPALSELLGET--QLSRPQTVKKIWEYVKARELQDPSDKRQIRCDDAMRAVFKQDRVHM 264
Query: 340 LGIQEMLARNHF 351
+ ++L +N +
Sbjct: 265 FTMNKILNQNLY 276
>gi|367047697|ref|XP_003654228.1| hypothetical protein THITE_2117056 [Thielavia terrestris NRRL 8126]
gi|347001491|gb|AEO67892.1| hypothetical protein THITE_2117056 [Thielavia terrestris NRRL 8126]
Length = 278
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Query: 165 KRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDA 224
KR+ G GG K +S L + G+ + R ++V++LW YI+ NNLQDP++ R+I+CD+
Sbjct: 192 KRKAG-GGFQKPFILSDPLAELCGESQLSRPQVVQRLWKYIKGNNLQDPNDGRQILCDEK 250
Query: 225 LRVVFETDCTDMFKMNKLLAKHIIPLE 251
+R VF+ D MF MNKLL + P++
Sbjct: 251 MRAVFKQDKVTMFTMNKLLGHQLYPID 277
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 279 IISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESIS 338
I+S+ LA+ G ++ + + +R+W+YIK N+L+DP + ILCD K+R + + ++
Sbjct: 204 ILSDPLAELCGES--QLSRPQVVQRLWKYIKGNNLQDPNDGRQILCDEKMRAVFKQDKVT 261
Query: 339 ALGIQEMLA 347
+ ++L
Sbjct: 262 MFTMNKLLG 270
>gi|189193639|ref|XP_001933158.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187978722|gb|EDU45348.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 274
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 55/81 (67%)
Query: 171 GGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFE 230
GG +K +SP L ++G+ + R + VK++W Y++ LQDPS+KR+I CDDA+R VF+
Sbjct: 190 GGFHKPMALSPALSELLGETQLSRPQTVKKIWEYVKARELQDPSDKRQIRCDDAMRAVFK 249
Query: 231 TDCTDMFKMNKLLAKHIIPLE 251
D MF MNK+L +++ ++
Sbjct: 250 QDRVHMFTMNKILNQNLYAVD 270
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 278 VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESI 337
+ +S AL++ LG ++ + + K++WEY+K L+DP + I CD +R + + +
Sbjct: 196 MALSPALSELLGET--QLSRPQTVKKIWEYVKARELQDPSDKRQIRCDDAMRAVFKQDRV 253
Query: 338 SALGIQEMLARNHF 351
+ ++L +N +
Sbjct: 254 HMFTMNKILNQNLY 267
>gi|330444183|ref|YP_004377169.1| hypothetical protein G5S_0481 [Chlamydophila pecorum E58]
gi|328807293|gb|AEB41466.1| BAF60b domain protein [Chlamydophila pecorum E58]
Length = 87
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFET-DCTDMF 237
+S EL +VG+ MPRTEIVK++W YI+K+NLQDP NKR I+ D +L VF T + DMF
Sbjct: 16 ISSELAVIVGEGPMPRTEIVKKVWEYIKKHNLQDPKNKRNILPDASLAKVFGTHNAIDMF 75
Query: 238 KMNKLLAKHII 248
+M K ++ HI+
Sbjct: 76 QMTKAISAHIV 86
Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 278 VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCES 336
V IS LA +G G M + E K+VWEYIK ++L+DP N IL DA L ++ G +
Sbjct: 14 VKISSELAVIVGEG--PMPRTEIVKKVWEYIKKHNLQDPKNKRNILPDASLAKVFGTHN 70
>gi|346320816|gb|EGX90416.1| SWIB/MDM2 domain protein [Cordyceps militaris CM01]
Length = 267
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 165 KRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDA 224
KR+ G GG K +S L + G+ + R ++VK+LW +I+ N+LQDPS+KR+I+CD+
Sbjct: 180 KRKAG-GGFQKPFNLSESLSVLCGETQLSRPQVVKKLWEHIKGNDLQDPSDKRQILCDER 238
Query: 225 LRVVFETDCTDMFKMNKLLAKHIIPL 250
+ VF DMFKMNK + H+ P+
Sbjct: 239 MFAVFRQPKVDMFKMNKEIGHHLYPV 264
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKL 328
+SE+L+ G ++ + + K++WE+IK N L+DP + ILCD ++
Sbjct: 193 LSESLSVLCGE--TQLSRPQVVKKLWEHIKGNDLQDPSDKRQILCDERM 239
>gi|425771362|gb|EKV09807.1| hypothetical protein PDIP_63010 [Penicillium digitatum Pd1]
gi|425776979|gb|EKV15176.1| hypothetical protein PDIG_28570 [Penicillium digitatum PHI26]
Length = 306
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 54/76 (71%)
Query: 172 GLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFET 231
G +K +S L A++G+P + R + VK++W YIR+N LQDPS++R+I CDDA+R VF+
Sbjct: 226 GFHKPMNLSEPLSALLGEPTLSRPQTVKKVWQYIRENELQDPSDRRQIRCDDAMRAVFKQ 285
Query: 232 DCTDMFKMNKLLAKHI 247
D MF M K+L +++
Sbjct: 286 DRVHMFTMTKILNQNL 301
Score = 41.6 bits (96), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISA 339
+SE L+ LG + + + K+VW+YI+ N L+DP + I CD +R + + +
Sbjct: 233 LSEPLSALLGEP--TLSRPQTVKKVWQYIRENELQDPSDRRQIRCDDAMRAVFKQDRVHM 290
Query: 340 LGIQEMLARNHF 351
+ ++L +N +
Sbjct: 291 FTMTKILNQNLY 302
>gi|451848665|gb|EMD61970.1| hypothetical protein COCSADRAFT_226390 [Cochliobolus sativus
ND90Pr]
Length = 283
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 56/81 (69%)
Query: 171 GGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFE 230
GG +K +SP L ++G+ + R + VK++W Y++ +LQDP++KR+I CDDA+R VF+
Sbjct: 199 GGFHKPMALSPALSELLGETQLSRPQTVKKIWEYVKARDLQDPNDKRQIRCDDAMRAVFK 258
Query: 231 TDCTDMFKMNKLLAKHIIPLE 251
D MF MNK+L +++ ++
Sbjct: 259 QDRVHMFTMNKILNQNLYAVD 279
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISA 339
+S AL++ LG ++ + + K++WEY+K L+DP + I CD +R + + +
Sbjct: 207 LSPALSELLGET--QLSRPQTVKKIWEYVKARDLQDPNDKRQIRCDDAMRAVFKQDRVHM 264
Query: 340 LGIQEMLARNHF 351
+ ++L +N +
Sbjct: 265 FTMNKILNQNLY 276
>gi|451998479|gb|EMD90943.1| hypothetical protein COCHEDRAFT_1176551 [Cochliobolus
heterostrophus C5]
Length = 283
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 56/81 (69%)
Query: 171 GGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFE 230
GG +K +SP L ++G+ + R + VK++W Y++ +LQDP++KR+I CDDA+R VF+
Sbjct: 199 GGFHKPMALSPALSELLGETQLSRPQTVKKIWEYVKARDLQDPNDKRQIRCDDAMRAVFK 258
Query: 231 TDCTDMFKMNKLLAKHIIPLE 251
D MF MNK+L +++ ++
Sbjct: 259 QDRVHMFTMNKILNQNLYAVD 279
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISA 339
+S AL++ LG ++ + + K++WEY+K L+DP + I CD +R + + +
Sbjct: 207 LSPALSELLGET--QLSRPQTVKKIWEYVKARDLQDPNDKRQIRCDDAMRAVFKQDRVHM 264
Query: 340 LGIQEMLARNHF 351
+ ++L +N +
Sbjct: 265 FTMNKILNQNLY 276
>gi|389688892|ref|ZP_10178457.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Microvirga sp. WSM3557]
gi|388590376|gb|EIM30660.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Microvirga sp. WSM3557]
Length = 90
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF-ETDCTDMFK 238
S EL AVVG +PRTE+V ++W YI+ NNLQ+P+NKR+I+ DD L+ VF D MF+
Sbjct: 21 SSELAAVVGSAPLPRTEVVSKVWEYIKANNLQNPANKREILADDKLQAVFGGKDKVSMFE 80
Query: 239 MNKLLAKHI 247
MNK A+H+
Sbjct: 81 MNKHFAQHL 89
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 281 SEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLG 333
S LA +G+ + + E +VWEYIK N+L++P N IL D KL+ + G
Sbjct: 21 SSELAAVVGSA--PLPRTEVVSKVWEYIKANNLQNPANKREILADDKLQAVFG 71
>gi|397594134|gb|EJK56158.1| hypothetical protein THAOC_24008 [Thalassiosira oceanica]
Length = 346
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 99/193 (51%), Gaps = 32/193 (16%)
Query: 148 FPQISAEVAKENPPVGAKRRGGPGGLNKVCGVSPELQAVVG-QPAMPRTEIVKQLWAYIR 206
P +++E E P AK GG GGL +S +L ++G + M RT+IVK++W YIR
Sbjct: 96 MPIVTSESLDEEP---AKPSGGRGGLMAEKEISDDLMNLLGCKKRMARTDIVKRMWQYIR 152
Query: 207 KNNLQDPSNKRKIICDDALRVVFETDCTDMFK-----MNKLLAKHIIPLEP---TKESSK 258
+P +KR+II D +R VF+ D MF+ MNK + HI P +P T SS
Sbjct: 153 -----NPKDKREIILDSRMREVFKVDNFTMFRLTVTSMNKYIGAHIDPYKPVDLTTNSSA 207
Query: 259 RFKPDAESTTEGMESGPSS---------VIISEALAKFLGTGGREML-QAEATKRVWEYI 308
K A+ST G E G +SEA+ + G+ +L + + T+ +W YI
Sbjct: 208 SSKRKAKST--GGEPGKKKKRAPGVQAPWRLSEAMVAVV---GKPVLPRPQITQALWAYI 262
Query: 309 KVNHLEDPLNSMV 321
+ N+L+ +N V
Sbjct: 263 RENNLQFSMNKYV 275
>gi|424824856|ref|ZP_18249843.1| hypothetical protein CAB1_0173 [Chlamydophila abortus LLG]
gi|333409955|gb|EGK68942.1| hypothetical protein CAB1_0173 [Chlamydophila abortus LLG]
Length = 87
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 54/73 (73%), Gaps = 1/73 (1%)
Query: 177 CGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFET-DCTD 235
++ +L A+VG+ MPRTEIVK++W YI+K+NLQDP NKR I+ D+AL VF + + D
Sbjct: 14 VNITSDLAAIVGKGPMPRTEIVKKVWDYIKKHNLQDPKNKRNILPDEALAKVFGSKNPID 73
Query: 236 MFKMNKLLAKHII 248
MF+M K L+ HI+
Sbjct: 74 MFQMTKALSSHIV 86
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 278 VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCES 336
V I+ LA +G G M + E K+VW+YIK ++L+DP N IL D L ++ G ++
Sbjct: 14 VNITSDLAAIVGKG--PMPRTEIVKKVWDYIKKHNLQDPKNKRNILPDEALAKVFGSKN 70
>gi|443897196|dbj|GAC74537.1| hypothetical protein PANT_12d00019 [Pseudozyma antarctica T-34]
Length = 262
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 165 KRRGGPGG-LNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDD 223
KR P N+ +SP+L V G MPR +VKQLWAYI+ NNLQ+ SNKR+I+CD
Sbjct: 173 KRAANPNNPFNRPLILSPKLADVCGGDEMPRHAVVKQLWAYIKSNNLQNESNKRQILCDA 232
Query: 224 ALRVVFETDCTDMFKMNKLLAKHI 247
L +F + D F+M KL+ H+
Sbjct: 233 KLTDIFGKEAVDSFEMAKLIGSHL 256
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 278 VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESI 337
+I+S LA GG EM + K++W YIK N+L++ N ILCDAKL ++ G E++
Sbjct: 186 LILSPKLADV--CGGDEMPRHAVVKQLWAYIKSNNLQNESNKRQILCDAKLTDIFGKEAV 243
Query: 338 SALGIQEMLARNHFLRQ 354
+ + +++ +H ++
Sbjct: 244 DSFEMAKLIG-SHLTKK 259
>gi|389694036|ref|ZP_10182130.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Microvirga sp. WSM3557]
gi|388587422|gb|EIM27715.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Microvirga sp. WSM3557]
Length = 102
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%)
Query: 170 PGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF 229
P L K S EL A+VG +PR E+V ++W YI+KNNLQ+P NKR+I+ DD L+ +F
Sbjct: 24 PNALQKPLQPSKELAAIVGSDPLPRGEVVSKIWDYIKKNNLQNPENKREILADDKLQPIF 83
Query: 230 ETDCTDMFKMNKLLAKHI 247
MF+MNK LA+H+
Sbjct: 84 GKPKVTMFEMNKHLAQHL 101
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 281 SEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISAL 340
S+ LA +G+ + + E ++W+YIK N+L++P N IL D KL+ + G ++
Sbjct: 34 SKELAAIVGSD--PLPRGEVVSKIWDYIKKNNLQNPENKREILADDKLQPIFGKPKVTMF 91
Query: 341 GIQEMLAR 348
+ + LA+
Sbjct: 92 EMNKHLAQ 99
>gi|395325141|gb|EJF57568.1| SWIB-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 255
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%)
Query: 183 LQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKL 242
L A++ + R + VKQLW YI+ NN+Q+P NK++IICDD R +F+ D DMFKMNK
Sbjct: 183 LAALLSVDKLSRPQTVKQLWTYIKANNMQNPENKKEIICDDRFRAIFKCDRIDMFKMNKE 242
Query: 243 LAKHI 247
L +H+
Sbjct: 243 LGQHL 247
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 279 IISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESIS 338
++SE LA L ++ + + K++W YIK N++++P N I+CD + R + C+ I
Sbjct: 178 MLSEPLAALLSVD--KLSRPQTVKQLWTYIKANNMQNPENKKEIICDDRFRAIFKCDRID 235
Query: 339 ALGIQEMLARNHF 351
+ + L ++ +
Sbjct: 236 MFKMNKELGQHLY 248
>gi|217977994|ref|YP_002362141.1| SWIB/MDM2 domain-containing protein [Methylocella silvestris BL2]
gi|217503370|gb|ACK50779.1| SWIB/MDM2 domain protein [Methylocella silvestris BL2]
Length = 108
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 49/68 (72%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
S EL VVG +PRTE+V ++W YI+K+ LQ+ +NKR+I+ DD L+ VF D MF+M
Sbjct: 40 SKELAEVVGSAPLPRTEVVSKVWEYIKKHKLQNEANKREILADDKLKAVFGRDKVTMFEM 99
Query: 240 NKLLAKHI 247
NK LA+H+
Sbjct: 100 NKYLAQHL 107
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 281 SEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISAL 340
S+ LA+ +G+ + + E +VWEYIK + L++ N IL D KL+ + G + ++
Sbjct: 40 SKELAEVVGSA--PLPRTEVVSKVWEYIKKHKLQNEANKREILADDKLKAVFGRDKVTMF 97
Query: 341 GIQEMLARN 349
+ + LA++
Sbjct: 98 EMNKYLAQH 106
>gi|115396856|ref|XP_001214067.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114193636|gb|EAU35336.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 1141
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 56/80 (70%), Gaps = 1/80 (1%)
Query: 171 GGLNKVCGVSPELQAVVG-QPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF 229
GG +K +SP L A++G + M R + VK+LW YI +++LQDPS++R+I CDDA+R VF
Sbjct: 204 GGFHKPLNLSPALSALLGGEETMSRPQTVKKLWQYIHEHDLQDPSDRRQIRCDDAMRAVF 263
Query: 230 ETDCTDMFKMNKLLAKHIIP 249
+ D MF M K+L+++ P
Sbjct: 264 KQDRIHMFTMTKILSQNFGP 283
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISA 339
+S AL+ LG G M + + K++W+YI + L+DP + I CD +R + + I
Sbjct: 212 LSPALSALLG-GEETMSRPQTVKKLWQYIHEHDLQDPSDRRQIRCDDAMRAVFKQDRIHM 270
Query: 340 LGIQEMLARN 349
+ ++L++N
Sbjct: 271 FTMTKILSQN 280
>gi|121605272|ref|YP_982601.1| SWIB/MDM2 domain-containing protein [Polaromonas naphthalenivorans
CJ2]
gi|120594241|gb|ABM37680.1| SWIB/MDM2 domain protein [Polaromonas naphthalenivorans CJ2]
Length = 134
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 50/84 (59%)
Query: 164 AKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDD 223
AK+R K +SPEL AVVG +PRTEIV +LW YI+ NNLQD +NKR I D
Sbjct: 50 AKKRTPNPAFMKALTLSPELSAVVGDQPLPRTEIVSKLWVYIKANNLQDQANKRMINADK 109
Query: 224 ALRVVFETDCTDMFKMNKLLAKHI 247
L VF MF+M L+ KH+
Sbjct: 110 KLLAVFGKPQVSMFEMAGLIGKHV 133
>gi|328699397|ref|XP_001947263.2| PREDICTED: upstream activation factor subunit spp27-like
[Acyrthosiphon pisum]
Length = 258
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 49/82 (59%)
Query: 167 RGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALR 226
RGG G K +SPEL +++G A+PR E+VK++WA I++ NL DPSNK+ ICDD L
Sbjct: 176 RGGNSGYTKSVALSPELASLMGSEALPRHEVVKKMWAIIKERNLYDPSNKQYAICDDDLM 235
Query: 227 VVFETDCTDMFKMNKLLAKHII 248
V F M K L H I
Sbjct: 236 KVIGVKRFRTFGMMKFLKNHFI 257
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Query: 270 GMESGPS-SVIISEALAKFLGTGGREML-QAEATKRVWEYIKVNHLEDPLNSMVILCDAK 327
G SG + SV +S LA +G+ E L + E K++W IK +L DP N +CD
Sbjct: 177 GGNSGYTKSVALSPELASLMGS---EALPRHEVVKKMWAIIKERNLYDPSNKQYAICDDD 233
Query: 328 LRELLGCESISALGIQEMLARNHFL 352
L +++G + G+ + L +NHF+
Sbjct: 234 LMKVIGVKRFRTFGMMKFL-KNHFI 257
>gi|323451768|gb|EGB07644.1| hypothetical protein AURANDRAFT_64768 [Aureococcus anophagefferens]
Length = 343
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 90/191 (47%), Gaps = 23/191 (12%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+S E+ AVVG +VK LW YI+K++LQ+P+NK +I+CDDAL+ VF+ D F
Sbjct: 157 LSDEMAAVVGVGRANHFRLVKLLWKYIKKHDLQNPANKNEIVCDDALKAVFKKDKVTSFG 216
Query: 239 MNKLLAKHIIPLE---PTKESSKR-------------FKPDAESTTEGMESGPSSVIISE 282
M+KLL+ H + P K S R + + + + S
Sbjct: 217 MSKLLSAHYFKDDAPAPKKRKSARDDGADDADDGAAAAPAPKKPKKKPAAASSAEYKGSR 276
Query: 283 ALAKFLG--TGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISAL 340
+A F G T R + TK VW +IK + L+ + I+CD L+ L + +
Sbjct: 277 EMADFCGVETNNRFTI----TKIVWAHIKEHGLQKEGDKRTIICDETLKGLFQVDEFNQF 332
Query: 341 GIQEMLARNHF 351
+ +++ HF
Sbjct: 333 QMAKLIG-THF 342
>gi|182678258|ref|YP_001832404.1| SWIB/MDM2 domain-containing protein [Beijerinckia indica subsp.
indica ATCC 9039]
gi|182634141|gb|ACB94915.1| SWIB/MDM2 domain protein [Beijerinckia indica subsp. indica ATCC
9039]
Length = 114
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 55/84 (65%)
Query: 164 AKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDD 223
A + G +K S EL +VG+ +PRTE+V ++W YI+K+ LQ+ +NKR+I+ DD
Sbjct: 30 AAKPAGNSAFSKPLQPSKELAEIVGEAPLPRTEVVSKVWEYIKKHKLQNEANKREILADD 89
Query: 224 ALRVVFETDCTDMFKMNKLLAKHI 247
L+ +F D MF+MNK LA+H+
Sbjct: 90 KLKPIFGKDKATMFEMNKFLAQHL 113
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 29/52 (55%)
Query: 297 QAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLAR 348
+ E +VWEYIK + L++ N IL D KL+ + G + + + + LA+
Sbjct: 60 RTEVVSKVWEYIKKHKLQNEANKREILADDKLKPIFGKDKATMFEMNKFLAQ 111
>gi|443922814|gb|ELU42191.1| SWIB domain-containing protein [Rhizoctonia solani AG-1 IA]
Length = 282
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 57/90 (63%), Gaps = 1/90 (1%)
Query: 171 GGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFE 230
GG K +SP L A G ++ R +IVK+LW +I+ NNLQ+P +KR+I+CDD ++ +F
Sbjct: 175 GGYQKEYALSPALAAFTG-VSLSRPQIVKRLWDHIKANNLQNPQDKREILCDDQMKGLFN 233
Query: 231 TDCTDMFKMNKLLAKHIIPLEPTKESSKRF 260
D +MF+MNK++ HI+ P + R
Sbjct: 234 VDKINMFQMNKVIGAHIVGDAPHTVADTRL 263
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISA 339
+S ALA F G + + + KR+W++IK N+L++P + ILCD +++ L + I+
Sbjct: 183 LSPALAAFTGV---SLSRPQIVKRLWDHIKANNLQNPQDKREILCDDQMKGLFNVDKINM 239
Query: 340 LGIQEMLA 347
+ +++
Sbjct: 240 FQMNKVIG 247
>gi|226532221|ref|NP_001150804.1| LOC100284437 [Zea mays]
gi|195641974|gb|ACG40455.1| SWIb domain-containing protein [Zea mays]
Length = 142
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 52/67 (77%)
Query: 163 GAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICD 222
A ++ G+ + VSP LQA+VG P +PRTE++K+LWAYI+++NLQDPS+K+ ++CD
Sbjct: 55 AAPKKKRATGITQPKSVSPALQAIVGDPVIPRTEVLKRLWAYIKEHNLQDPSDKKVVVCD 114
Query: 223 DALRVVF 229
+ L+V+F
Sbjct: 115 EKLKVLF 121
Score = 44.3 bits (103), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 297 QAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELL-GCESISALGIQEML 346
+ E KR+W YIK ++L+DP + V++CD KL+ L G E + L I ++L
Sbjct: 86 RTEVLKRLWAYIKEHNLQDPSDKKVVVCDEKLKVLFAGRERVGFLEIAKLL 136
>gi|388852014|emb|CCF54370.1| uncharacterized protein [Ustilago hordei]
Length = 262
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 165 KRRGGPGG-LNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDD 223
KR P N+ +SP++ V G MPR +VKQLWAYI+ NNLQ+ SNKR+I+CD
Sbjct: 173 KRAANPNNPFNRPLILSPKMAQVCGGNEMPRHAVVKQLWAYIKSNNLQNESNKRQILCDA 232
Query: 224 ALRVVFETDCTDMFKMNKLLAKHI 247
L +F + D F+M KL+ H+
Sbjct: 233 KLTDIFGKESVDSFEMAKLIGSHL 256
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
Query: 278 VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESI 337
+I+S +A+ G G EM + K++W YIK N+L++ N ILCDAKL ++ G ES+
Sbjct: 186 LILSPKMAQVCG--GNEMPRHAVVKQLWAYIKSNNLQNESNKRQILCDAKLTDIFGKESV 243
Query: 338 SALGIQEMLARNHFLRQ 354
+ + +++ +H ++
Sbjct: 244 DSFEMAKLIG-SHLTKK 259
>gi|406986559|gb|EKE07122.1| hypothetical protein ACD_18C00179G0006 [uncultured bacterium]
Length = 91
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 55/82 (67%), Gaps = 1/82 (1%)
Query: 166 RRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDAL 225
R+ P L K +SPEL+AVVG MPR+++VK+LW YI++ NLQ+P+NKR I DD L
Sbjct: 3 RKVNPALL-KPLNLSPELEAVVGPGPMPRSQVVKKLWEYIKEKNLQNPANKRNIFADDLL 61
Query: 226 RVVFETDCTDMFKMNKLLAKHI 247
+F MF+M KL++ HI
Sbjct: 62 MPLFGKKEVTMFEMTKLVSPHI 83
>gi|344304505|gb|EGW34737.1| hypothetical protein SPAPADRAFT_47821 [Spathaspora passalidarum
NRRL Y-27907]
Length = 248
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 62/111 (55%), Gaps = 14/111 (12%)
Query: 167 RGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALR 226
R G NK +S EL ++GQ R ++VKQLW YI+ N+LQ+P +KR+I+CD+ L
Sbjct: 130 RTAAVGFNKEMVLSNELANLIGQSRASRPQVVKQLWVYIKDNDLQNPEDKRQILCDERLE 189
Query: 227 VVFETDCTDMFKMNKLLAKHIIPLEPTKESSKRFKPDAESTTEGMESGPSS 277
+F+ F+MNKLL HI FKP E ++G+ + S+
Sbjct: 190 RLFKKKMVTSFEMNKLLTSHI------------FKP--EDISDGLANQSSN 226
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 278 VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESI 337
+++S LA +G + + K++W YIK N L++P + ILCD +L L + +
Sbjct: 140 MVLSNELANLIGQS--RASRPQVVKQLWVYIKDNDLQNPEDKRQILCDERLERLFKKKMV 197
Query: 338 SALGIQEMLARNHF 351
++ + ++L + F
Sbjct: 198 TSFEMNKLLTSHIF 211
>gi|449523960|ref|XP_004168991.1| PREDICTED: upstream activation factor subunit UAF30-like [Cucumis
sativus]
Length = 146
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 63/107 (58%), Gaps = 1/107 (0%)
Query: 143 SKAEAFPQISAEVAKENPPVGAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLW 202
SK+ P +A +++ P K GGL K VSP L +GQ + RTE VKQ+W
Sbjct: 37 SKSTLKPSTAAVSGQKSKPAPKKVANPSGGLLKTQKVSPTLAGFLGQSEIARTEAVKQIW 96
Query: 203 AYIRKNNLQDPSNKRKIICDDALRVVFET-DCTDMFKMNKLLAKHII 248
AYI+ NNLQ+P++KR+IICD L+ +F + M ++ K L+ H +
Sbjct: 97 AYIKLNNLQNPTDKRQIICDAKLKAIFGGREKVGMLEIPKFLSIHFV 143
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGC-ESIS 338
+S LA FLG E+ + EA K++W YIK+N+L++P + I+CDAKL+ + G E +
Sbjct: 73 VSPTLAGFLGQ--SEIARTEAVKQIWAYIKLNNLQNPTDKRQIICDAKLKAIFGGREKVG 130
Query: 339 ALGIQEMLARNHFLR 353
L I + L+ HF++
Sbjct: 131 MLEIPKFLSI-HFVK 144
>gi|255950706|ref|XP_002566120.1| Pc22g22250 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211593137|emb|CAP99513.1| Pc22g22250 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 270
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 54/76 (71%)
Query: 172 GLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFET 231
G +K +S L A++G+ + R + VK++W YIR+N LQDPS++R+I+CDDA+R VF+
Sbjct: 190 GFHKPMNLSEPLSALLGELTLSRPQTVKKVWQYIRENELQDPSDRRQILCDDAMRAVFKQ 249
Query: 232 DCTDMFKMNKLLAKHI 247
D MF M K+L +++
Sbjct: 250 DRVHMFTMTKILNQNL 265
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 12/107 (11%)
Query: 255 ESSKRFKPDAESTTEGMESGPSSVI----------ISEALAKFLGTGGREMLQAEATKRV 304
++SKR K + +S + E V +SE L+ LG + + + K+V
Sbjct: 162 KTSKRVKAEDDSDVDSGEEPKKEVNRNTGFHKPMNLSEPLSALLGE--LTLSRPQTVKKV 219
Query: 305 WEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNHF 351
W+YI+ N L+DP + ILCD +R + + + + ++L +N +
Sbjct: 220 WQYIRENELQDPSDRRQILCDDAMRAVFKQDRVHMFTMTKILNQNLY 266
>gi|351725697|ref|NP_001235054.1| uncharacterized protein LOC100499975 [Glycine max]
gi|255628211|gb|ACU14450.1| unknown [Glycine max]
Length = 139
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 75/130 (57%), Gaps = 12/130 (9%)
Query: 129 SQAAAPPPQPHSNVS---KAEAFPQISAE---VAKENPPVGAKRRGGPGGLNKVCGVSPE 182
S PPP+ H+ + + A IS V++ + P R G+ K VSPE
Sbjct: 12 SSRVLPPPETHTFMRTRPSSAALRTISVSCCTVSQSSKPARKIR-----GIMKPRKVSPE 66
Query: 183 LQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFE-TDCTDMFKMNK 241
++ +VG P M RT+++K++WAYI+ NNLQDP++KR I CD+ L+ VF D +M ++ +
Sbjct: 67 MEDLVGAPEMARTQVLKRIWAYIKDNNLQDPTDKRTINCDEKLKKVFAGKDQVEMLEIAR 126
Query: 242 LLAKHIIPLE 251
L++ H + E
Sbjct: 127 LISPHFLKSE 136
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 290 TGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELL-GCESISALGIQEMLAR 348
G EM + + KR+W YIK N+L+DP + I CD KL+++ G + + L I +++
Sbjct: 71 VGAPEMARTQVLKRIWAYIKDNNLQDPTDKRTINCDEKLKKVFAGKDQVEMLEIARLIS- 129
Query: 349 NHFLR 353
HFL+
Sbjct: 130 PHFLK 134
>gi|405123222|gb|AFR97987.1| hypothetical protein CNAG_01790 [Cryptococcus neoformans var.
grubii H99]
Length = 250
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 51/77 (66%)
Query: 171 GGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFE 230
G NK +S L +VG ++ R ++VK +WAY+++ NLQD ++KR I+CDD LR VF
Sbjct: 167 GAFNKELLLSDSLADLVGTHSLSRPQVVKHIWAYVKERNLQDSNDKRYILCDDKLREVFH 226
Query: 231 TDCTDMFKMNKLLAKHI 247
TD MF MNK+L H+
Sbjct: 227 TDRLHMFTMNKILVNHL 243
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 291 GGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNH 350
G + + + K +W Y+K +L+D + ILCD KLRE+ + + + ++L NH
Sbjct: 184 GTHSLSRPQVVKHIWAYVKERNLQDSNDKRYILCDDKLREVFHTDRLHMFTMNKILV-NH 242
Query: 351 F 351
Sbjct: 243 L 243
>gi|343427276|emb|CBQ70804.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 260
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 165 KRRGGPGG-LNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDD 223
KR P N+ +SP+L V G MPR +VKQLWAYI+ NNLQ+ NKR+I+CD
Sbjct: 171 KRAANPNNPFNRPLILSPKLADVCGGNEMPRHAVVKQLWAYIKSNNLQNEGNKRQILCDA 230
Query: 224 ALRVVFETDCTDMFKMNKLLAKHI 247
L +F + D F+M KL+ H+
Sbjct: 231 KLTSIFGKEAVDSFEMAKLIGAHL 254
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 278 VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESI 337
+I+S LA G G EM + K++W YIK N+L++ N ILCDAKL + G E++
Sbjct: 184 LILSPKLADVCG--GNEMPRHAVVKQLWAYIKSNNLQNEGNKRQILCDAKLTSIFGKEAV 241
Query: 338 SALGIQEMLA 347
+ + +++
Sbjct: 242 DSFEMAKLIG 251
>gi|332186843|ref|ZP_08388585.1| SWIB/MDM2 domain protein [Sphingomonas sp. S17]
gi|332013176|gb|EGI55239.1| SWIB/MDM2 domain protein [Sphingomonas sp. S17]
Length = 86
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 49/68 (72%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
S EL A+VG +PR++++ ++W YI+ NNLQ+P NKR+I+ DD L+ VF D MF+M
Sbjct: 17 SEELGAIVGNEKLPRSQVISKVWDYIKANNLQNPENKREILADDKLKKVFGKDKCTMFEM 76
Query: 240 NKLLAKHI 247
NK ++ H+
Sbjct: 77 NKFISAHL 84
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 281 SEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISAL 340
SE L +G ++ +++ +VW+YIK N+L++P N IL D KL+++ G + +
Sbjct: 17 SEELGAIVGN--EKLPRSQVISKVWDYIKANNLQNPENKREILADDKLKKVFGKDKCTMF 74
Query: 341 GIQEMLA 347
+ + ++
Sbjct: 75 EMNKFIS 81
>gi|308497482|ref|XP_003110928.1| hypothetical protein CRE_04566 [Caenorhabditis remanei]
gi|308242808|gb|EFO86760.1| hypothetical protein CRE_04566 [Caenorhabditis remanei]
Length = 326
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 50/86 (58%)
Query: 163 GAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICD 222
A G G + K+C +S ELQ + M R ++VK LW YI++ NL+DP N + I+CD
Sbjct: 202 NADNSGKFGPMTKLCYISTELQQITKDQWMKRCDVVKVLWDYIKEKNLKDPKNGQFILCD 261
Query: 223 DALRVVFETDCTDMFKMNKLLAKHII 248
D L+ +F + F M K L KHII
Sbjct: 262 DVLKSIFNKNRIKGFGMTKFLTKHII 287
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%)
Query: 290 TGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLAR 348
T + M + + K +W+YIK +L+DP N ILCD L+ + I G+ + L +
Sbjct: 226 TKDQWMKRCDVVKVLWDYIKEKNLKDPKNGQFILCDDVLKSIFNKNRIKGFGMTKFLTK 284
>gi|452980399|gb|EME80160.1| hypothetical protein MYCFIDRAFT_56639 [Pseudocercospora fijiensis
CIRAD86]
Length = 281
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 57/85 (67%)
Query: 167 RGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALR 226
R GG +K +S L ++G+ + R + VK++W Y+++ +LQ+P +KR+I+CD+ ++
Sbjct: 194 REKKGGFHKPMNLSAPLSELLGETQLSRPQTVKKIWEYVKERDLQNPKDKRQIMCDEKMQ 253
Query: 227 VVFETDCTDMFKMNKLLAKHIIPLE 251
VF+ + MF MNKLLA H+ P++
Sbjct: 254 AVFKGESVHMFTMNKLLANHLYPVD 278
Score = 44.7 bits (104), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISA 339
+S L++ LG ++ + + K++WEY+K L++P + I+CD K++ + ES+
Sbjct: 206 LSAPLSELLGE--TQLSRPQTVKKIWEYVKERDLQNPKDKRQIMCDEKMQAVFKGESVHM 263
Query: 340 LGIQEMLARNHF 351
+ ++LA NH
Sbjct: 264 FTMNKLLA-NHL 274
>gi|410076390|ref|XP_003955777.1| hypothetical protein KAFR_0B03450 [Kazachstania africana CBS 2517]
gi|372462360|emb|CCF56642.1| hypothetical protein KAFR_0B03450 [Kazachstania africana CBS 2517]
Length = 230
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+SP+L+ ++G+ +PRT++VK +W YI+ NNLQ+ +++R+I+CDD +R +F T MF
Sbjct: 129 LSPQLKELLGEDELPRTQVVKLVWDYIKSNNLQNEADRREILCDDKMRPIFGNKVT-MFS 187
Query: 239 MNKLLAKHII 248
MNK+L+KH+
Sbjct: 188 MNKVLSKHLF 197
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 279 IISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESIS 338
++S L + LG E+ + + K VW+YIK N+L++ + ILCD K+R + G ++
Sbjct: 128 LLSPQLKELLGED--ELPRTQVVKLVWDYIKSNNLQNEADRREILCDDKMRPIFG-NKVT 184
Query: 339 ALGIQEMLARNHFLR 353
+ ++L+++ F R
Sbjct: 185 MFSMNKVLSKHLFNR 199
>gi|159130432|gb|EDP55545.1| SWIB/MDM2 domain protein [Aspergillus fumigatus A1163]
Length = 287
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
Query: 171 GGLNKVCGVSPELQAVV-GQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF 229
GG +K +SP L A++ G+ + R + VK+LW YIR++NLQDP+++R I CDDA+R VF
Sbjct: 205 GGFHKPLNLSPALSALLDGETTLSRPQTVKRLWQYIREHNLQDPNDRRHIRCDDAMRAVF 264
Query: 230 ETDCTDMFKMNKLLAKHI 247
+ D MF M K+L +++
Sbjct: 265 KQDRIHMFTMTKILNQNL 282
>gi|146322353|ref|XP_749952.2| SWIB/MDM2 domain protein [Aspergillus fumigatus Af293]
gi|129556975|gb|EAL87914.2| SWIB/MDM2 domain protein [Aspergillus fumigatus Af293]
Length = 287
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
Query: 171 GGLNKVCGVSPELQAVV-GQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF 229
GG +K +SP L A++ G+ + R + VK+LW YIR++NLQDP+++R I CDDA+R VF
Sbjct: 205 GGFHKPLNLSPALSALLDGETTLSRPQTVKRLWQYIREHNLQDPNDRRHIRCDDAMRAVF 264
Query: 230 ETDCTDMFKMNKLLAKHI 247
+ D MF M K+L +++
Sbjct: 265 KQDRIHMFTMTKILNQNL 282
>gi|297620618|ref|YP_003708755.1| hypothetical protein wcw_0377 [Waddlia chondrophila WSU 86-1044]
gi|297375919|gb|ADI37749.1| conserved hypothetical protein [Waddlia chondrophila WSU 86-1044]
gi|337292761|emb|CCB90766.1| putative uncharacterized protein [Waddlia chondrophila 2032/99]
Length = 94
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 170 PGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF 229
P K GVS L +VG+ M RTE+ K+LW YI+KN LQDP+NKR I+ D L VF
Sbjct: 7 PSAFMKPVGVSDALAEIVGKGPMARTEVTKKLWDYIKKNKLQDPNNKRNIVPDQKLAKVF 66
Query: 230 -ETDCTDMFKMNKLLAKHI 247
T DMFKM ++KH+
Sbjct: 67 GSTQAIDMFKMTSKVSKHL 85
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 278 VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESI 337
V +S+ALA+ +G G M + E TK++W+YIK N L+DP N I+ D KL ++ G S
Sbjct: 14 VGVSDALAEIVGKG--PMARTEVTKKLWDYIKKNKLQDPNNKRNIVPDQKLAKVFG--ST 69
Query: 338 SALGIQEMLAR 348
A+ + +M ++
Sbjct: 70 QAIDMFKMTSK 80
>gi|393769784|ref|ZP_10358303.1| SWIB/MDM2 domain-containing protein [Methylobacterium sp. GXF4]
gi|392724788|gb|EIZ82134.1| SWIB/MDM2 domain-containing protein [Methylobacterium sp. GXF4]
Length = 123
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 49/68 (72%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
S +L A+VG +PR E+V ++W YI+K+NLQ+P NKR+I+ DD L+ VF D MF+M
Sbjct: 54 SADLGAIVGTNPLPRGEVVSKVWDYIKKHNLQNPENKREILADDKLKKVFGKDKCSMFEM 113
Query: 240 NKLLAKHI 247
NK LA H+
Sbjct: 114 NKHLAAHL 121
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 31/51 (60%)
Query: 297 QAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLA 347
+ E +VW+YIK ++L++P N IL D KL+++ G + S + + LA
Sbjct: 68 RGEVVSKVWDYIKKHNLQNPENKREILADDKLKKVFGKDKCSMFEMNKHLA 118
>gi|332529043|ref|ZP_08405008.1| swib/mdm2 domain-containing protein [Hylemonella gracilis ATCC
19624]
gi|332041487|gb|EGI77848.1| swib/mdm2 domain-containing protein [Hylemonella gracilis ATCC
19624]
Length = 130
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 45/68 (66%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
SP L AVVG +PRTE+V +LWAYI+KN LQD NKR I DD L+ VF MF++
Sbjct: 62 SPALAAVVGSTPLPRTEVVSKLWAYIKKNGLQDKVNKRNINADDKLKTVFGKAQITMFEL 121
Query: 240 NKLLAKHI 247
L+ KH+
Sbjct: 122 ASLIGKHL 129
>gi|19075845|ref|NP_588345.1| RNA polymerase I upstream activation factor complex subunit Spp27
[Schizosaccharomyces pombe 972h-]
gi|74626867|sp|O74503.1|UAF30_SCHPO RecName: Full=Upstream activation factor subunit spp27; AltName:
Full=Upstream activation factor 27 KDa subunit;
Short=p27; AltName: Full=Upstream activation factor 30
KDa subunit; Short=p30; AltName: Full=Upstream
activation factor subunit uaf30
gi|3581917|emb|CAA20856.1| RNA polymerase I upstream activation factor complex subunit Spp27
[Schizosaccharomyces pombe]
Length = 233
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 56/92 (60%), Gaps = 4/92 (4%)
Query: 157 KENPPVGAKRRGG--PGG--LNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQD 212
KE+ G KR+ P LNK +SP+L +G + R + VK+LW YI+ ++LQD
Sbjct: 97 KEDGEEGGKRKRNQDPANNPLNKPMKLSPKLAEFLGLEQLSRPQTVKKLWEYIKAHDLQD 156
Query: 213 PSNKRKIICDDALRVVFETDCTDMFKMNKLLA 244
P++KR I+CDD L+ VFE D MF MNK L
Sbjct: 157 PNDKRTILCDDKLKSVFEVDTLHMFTMNKYLT 188
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 8/102 (7%)
Query: 252 PTKESSKRFKPDAESTTEGMESGPSS------VIISEALAKFLGTGGREMLQAEATKRVW 305
P K + KR + E P++ + +S LA+FLG ++ + + K++W
Sbjct: 89 PAKRTRKRKEDGEEGGKRKRNQDPANNPLNKPMKLSPKLAEFLGL--EQLSRPQTVKKLW 146
Query: 306 EYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLA 347
EYIK + L+DP + ILCD KL+ + +++ + + L
Sbjct: 147 EYIKAHDLQDPNDKRTILCDDKLKSVFEVDTLHMFTMNKYLT 188
>gi|374288756|ref|YP_005035841.1| putative histone protein [Bacteriovorax marinus SJ]
gi|301167297|emb|CBW26879.1| putative histone protein [Bacteriovorax marinus SJ]
Length = 235
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 48/68 (70%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
S +L AV+G A+PRTE VK++W YI+KNNLQ+P NKR I+ DD L+ VF MF++
Sbjct: 167 SADLAAVIGDKAVPRTEAVKKMWDYIKKNNLQNPKNKRNILADDLLKKVFGKKEVTMFEL 226
Query: 240 NKLLAKHI 247
+L KH+
Sbjct: 227 AGILGKHL 234
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 36/58 (62%)
Query: 291 GGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLAR 348
G + + + EA K++W+YIK N+L++P N IL D L+++ G + ++ + +L +
Sbjct: 175 GDKAVPRTEAVKKMWDYIKKNNLQNPKNKRNILADDLLKKVFGKKEVTMFELAGILGK 232
>gi|119497381|ref|XP_001265449.1| SWIB/MDM2 domain protein [Neosartorya fischeri NRRL 181]
gi|119413611|gb|EAW23552.1| SWIB/MDM2 domain protein [Neosartorya fischeri NRRL 181]
Length = 287
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
Query: 171 GGLNKVCGVSPELQAVV-GQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF 229
GG +K +SP L A++ G+ + R + VK+LW YIR+++LQDP+++R+I CDDA+R VF
Sbjct: 205 GGFHKPLNLSPALSALLDGETTLSRPQTVKRLWQYIREHDLQDPNDRRQIRCDDAMRAVF 264
Query: 230 ETDCTDMFKMNKLLAKHI 247
+ D MF M K+L +++
Sbjct: 265 KQDRIHMFTMTKILNQNL 282
>gi|261199726|ref|XP_002626264.1| SWIB/MDM2 domain-containing protein [Ajellomyces dermatitidis
SLH14081]
gi|239594472|gb|EEQ77053.1| SWIB/MDM2 domain-containing protein [Ajellomyces dermatitidis
SLH14081]
gi|239615636|gb|EEQ92623.1| SWIB/MDM2 domain-containing protein [Ajellomyces dermatitidis ER-3]
gi|327354262|gb|EGE83119.1| SWIB/MDM2 domain-containing protein [Ajellomyces dermatitidis ATCC
18188]
Length = 281
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
Query: 171 GGLNKVCGVSPELQAVVG-QPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF 229
GG +K +SP L ++G + + R + VK++W YIR+N+LQDPS++R+I+CDD +R VF
Sbjct: 199 GGFHKPLTLSPTLSTLLGGEITLSRPQTVKKVWQYIRENSLQDPSDRRQILCDDLMRAVF 258
Query: 230 ETDCTDMFKMNKLLAKHI 247
+ D MF M K+L +++
Sbjct: 259 KQDRIHMFTMTKILNQNL 276
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 261 KPDAESTTEGMESGP--SSVIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLN 318
+PD+E E +G + +S L+ LG G + + + K+VW+YI+ N L+DP +
Sbjct: 186 EPDSEPKREVTRTGGFHKPLTLSPTLSTLLG-GEITLSRPQTVKKVWQYIRENSLQDPSD 244
Query: 319 SMVILCDAKLRELLGCESISALGIQEMLARNHF 351
ILCD +R + + I + ++L +N +
Sbjct: 245 RRQILCDDLMRAVFKQDRIHMFTMTKILNQNLY 277
>gi|255714771|ref|XP_002553667.1| KLTH0E04246p [Lachancea thermotolerans]
gi|238935049|emb|CAR23230.1| KLTH0E04246p [Lachancea thermotolerans CBS 6340]
Length = 209
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 62/92 (67%), Gaps = 4/92 (4%)
Query: 159 NPPVGAKRR--GGPGGLN-KVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSN 215
N V KR+ LN K +S ELQ +VG+P M RT++VK++W +I++ +LQ+P +
Sbjct: 95 NTKVKKKRKVSESSNSLNQKKMQLSDELQKLVGEPEMARTQVVKKVWEHIKEQDLQNPQD 154
Query: 216 KRKIICDDALRVVFETDCTDMFKMNKLLAKHI 247
+R+I+CD+ ++ +F D T MF +NK L+KHI
Sbjct: 155 RREILCDELMKPIF-GDKTTMFALNKSLSKHI 185
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISA 339
+S+ L K +G EM + + K+VWE+IK L++P + ILCD ++ + G + +
Sbjct: 118 LSDELQKLVGEP--EMARTQVVKKVWEHIKEQDLQNPQDRREILCDELMKPIFG-DKTTM 174
Query: 340 LGIQEMLARNHFLR 353
+ + L+++ + R
Sbjct: 175 FALNKSLSKHIYSR 188
>gi|242796033|ref|XP_002482714.1| SWIB/MDM2 domain protein [Talaromyces stipitatus ATCC 10500]
gi|218719302|gb|EED18722.1| SWIB/MDM2 domain protein [Talaromyces stipitatus ATCC 10500]
Length = 281
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 59/88 (67%), Gaps = 2/88 (2%)
Query: 162 VGAKRR-GGPGGLNKVCGVSPELQAVV-GQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKI 219
GAK+ GG +K +SP L ++ G+ A+ R + VK++W YI+ N+LQDPS++R+I
Sbjct: 189 TGAKKEVNRSGGFHKPLNLSPALSELLDGEVALSRPQTVKRVWEYIKANDLQDPSDRRQI 248
Query: 220 ICDDALRVVFETDCTDMFKMNKLLAKHI 247
CDD +R+VF+ D MF M K+L +++
Sbjct: 249 RCDDRMRLVFKQDRVHMFTMTKILNQNL 276
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISA 339
+S AL++ L G + + + KRVWEYIK N L+DP + I CD ++R + + +
Sbjct: 207 LSPALSELLD-GEVALSRPQTVKRVWEYIKANDLQDPSDRRQIRCDDRMRLVFKQDRVHM 265
Query: 340 LGIQEMLARNHF 351
+ ++L +N +
Sbjct: 266 FTMTKILNQNLY 277
>gi|452752127|ref|ZP_21951871.1| SWIB-domain-containing protein [alpha proteobacterium JLT2015]
gi|451960647|gb|EMD83059.1| SWIB-domain-containing protein [alpha proteobacterium JLT2015]
Length = 85
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 49/69 (71%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+SPEL AV G+ M R E+V +W YI++N+LQ+P NKR+I+ D L+ +F D MF+
Sbjct: 14 LSPELAAVTGKSTMTRAEVVSGMWDYIKRNDLQNPENKREIMADAKLKPIFGKDKVTMFE 73
Query: 239 MNKLLAKHI 247
MNKL++ H+
Sbjct: 74 MNKLISPHL 82
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 35/58 (60%)
Query: 290 TGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLA 347
TG M +AE +W+YIK N L++P N I+ DAKL+ + G + ++ + ++++
Sbjct: 22 TGKSTMTRAEVVSGMWDYIKRNDLQNPENKREIMADAKLKPIFGKDKVTMFEMNKLIS 79
>gi|449454542|ref|XP_004145013.1| PREDICTED: upstream activation factor subunit UAF30-like [Cucumis
sativus]
gi|449473955|ref|XP_004154030.1| PREDICTED: upstream activation factor subunit UAF30-like [Cucumis
sativus]
Length = 146
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 62/107 (57%), Gaps = 1/107 (0%)
Query: 143 SKAEAFPQISAEVAKENPPVGAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLW 202
SK+ P +A +++ P K GGL K VSP L +GQ + RTE VKQ+W
Sbjct: 37 SKSTLKPSTAAVSGQKSKPAPKKVANPSGGLLKTQKVSPTLAGFLGQSEIARTEAVKQIW 96
Query: 203 AYIRKNNLQDPSNKRKIICDDALRVVFET-DCTDMFKMNKLLAKHII 248
YI+ NNLQ+P++KR+IICD L+ +F + M ++ K L+ H +
Sbjct: 97 VYIKLNNLQNPTDKRQIICDAKLKAIFGGREKVGMLEIPKFLSIHFV 143
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGC-ESIS 338
+S LA FLG E+ + EA K++W YIK+N+L++P + I+CDAKL+ + G E +
Sbjct: 73 VSPTLAGFLGQ--SEIARTEAVKQIWVYIKLNNLQNPTDKRQIICDAKLKAIFGGREKVG 130
Query: 339 ALGIQEMLARNHFLR 353
L I + L+ HF++
Sbjct: 131 MLEIPKFLSI-HFVK 144
>gi|134055154|emb|CAK37099.1| unnamed protein product [Aspergillus niger]
Length = 282
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 68/108 (62%), Gaps = 3/108 (2%)
Query: 143 SKAEAFPQISAEVAK--ENPPVGAKRRGGPGGLNKVCGVSPELQAVV-GQPAMPRTEIVK 199
+KA+ ++ AE E+ K+ GG +K +SP L A++ G+ + R + VK
Sbjct: 170 AKAKTSKKVKAEDDSDLESGSDSGKKVNRSGGFHKPLTLSPALSALLDGEVTLSRPQTVK 229
Query: 200 QLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHI 247
+LW YI +++LQDP+++R+I CDDA+R VF+ D MF M K+L++++
Sbjct: 230 RLWQYIHEHDLQDPNDRRQIRCDDAMRAVFKQDRIHMFTMTKILSQNL 277
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 54/107 (50%), Gaps = 11/107 (10%)
Query: 255 ESSKRFKPDAESTTE-GMESGPSS---------VIISEALAKFLGTGGREMLQAEATKRV 304
++SK+ K + +S E G +SG + +S AL+ L G + + + KR+
Sbjct: 173 KTSKKVKAEDDSDLESGSDSGKKVNRSGGFHKPLTLSPALSALLD-GEVTLSRPQTVKRL 231
Query: 305 WEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNHF 351
W+YI + L+DP + I CD +R + + I + ++L++N +
Sbjct: 232 WQYIHEHDLQDPNDRRQIRCDDAMRAVFKQDRIHMFTMTKILSQNLY 278
>gi|160896333|ref|YP_001561915.1| DNA topoisomerase III [Delftia acidovorans SPH-1]
gi|160361917|gb|ABX33530.1| DNA topoisomerase III [Delftia acidovorans SPH-1]
Length = 975
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 47/70 (67%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
S L AV+G+ + RTE+VK+LW Y++ NLQDP +KR I DD LR VF D +MF++
Sbjct: 906 SAALAAVIGEGTVARTEVVKKLWEYVKAQNLQDPKDKRVIRADDKLRPVFGKDSVNMFEL 965
Query: 240 NKLLAKHIIP 249
++ KH+ P
Sbjct: 966 AGIVGKHLTP 975
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 281 SEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISAL 340
S ALA +G G + + E K++WEY+K +L+DP + VI D KLR + G +S++
Sbjct: 906 SAALAAVIGEG--TVARTEVVKKLWEYVKAQNLQDPKDKRVIRADDKLRPVFGKDSVNMF 963
Query: 341 GIQEMLARN 349
+ ++ ++
Sbjct: 964 ELAGIVGKH 972
>gi|351725129|ref|NP_001235290.1| uncharacterized protein LOC100306198 [Glycine max]
gi|255627841|gb|ACU14265.1| unknown [Glycine max]
Length = 148
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 57/81 (70%), Gaps = 1/81 (1%)
Query: 172 GLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFE- 230
G+ K VSPE++ +VG P M RT+++K++WAYI+ NNLQDP++KR I CD+ L+ VF
Sbjct: 65 GIMKPRKVSPEMEDLVGAPEMARTQVLKRIWAYIKDNNLQDPTDKRTINCDEKLKKVFAG 124
Query: 231 TDCTDMFKMNKLLAKHIIPLE 251
D +M ++ +L++ H + E
Sbjct: 125 KDQVEMLEIARLISPHFLKSE 145
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 290 TGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELL-GCESISALGIQEMLAR 348
G EM + + KR+W YIK N+L+DP + I CD KL+++ G + + L I +++
Sbjct: 80 VGAPEMARTQVLKRIWAYIKDNNLQDPTDKRTINCDEKLKKVFAGKDQVEMLEIARLIS- 138
Query: 349 NHFLR 353
HFL+
Sbjct: 139 PHFLK 143
>gi|317025428|ref|XP_001389048.2| SWIB/MDM2 domain protein [Aspergillus niger CBS 513.88]
gi|350638168|gb|EHA26524.1| hypothetical protein ASPNIDRAFT_205951 [Aspergillus niger ATCC
1015]
Length = 285
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 68/108 (62%), Gaps = 3/108 (2%)
Query: 143 SKAEAFPQISAEVAK--ENPPVGAKRRGGPGGLNKVCGVSPELQAVV-GQPAMPRTEIVK 199
+KA+ ++ AE E+ K+ GG +K +SP L A++ G+ + R + VK
Sbjct: 173 AKAKTSKKVKAEDDSDLESGSDSGKKVNRSGGFHKPLTLSPALSALLDGEVTLSRPQTVK 232
Query: 200 QLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHI 247
+LW YI +++LQDP+++R+I CDDA+R VF+ D MF M K+L++++
Sbjct: 233 RLWQYIHEHDLQDPNDRRQIRCDDAMRAVFKQDRIHMFTMTKILSQNL 280
Score = 42.0 bits (97), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 54/107 (50%), Gaps = 11/107 (10%)
Query: 255 ESSKRFKPDAESTTE-GMESGPSS---------VIISEALAKFLGTGGREMLQAEATKRV 304
++SK+ K + +S E G +SG + +S AL+ L G + + + KR+
Sbjct: 176 KTSKKVKAEDDSDLESGSDSGKKVNRSGGFHKPLTLSPALSALLD-GEVTLSRPQTVKRL 234
Query: 305 WEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNHF 351
W+YI + L+DP + I CD +R + + I + ++L++N +
Sbjct: 235 WQYIHEHDLQDPNDRRQIRCDDAMRAVFKQDRIHMFTMTKILSQNLY 281
>gi|163854990|ref|YP_001629288.1| hypothetical protein Bpet0685 [Bordetella petrii DSM 12804]
gi|293603432|ref|ZP_06685857.1| DNA topoisomerase domain protein [Achromobacter piechaudii ATCC
43553]
gi|311103989|ref|YP_003976842.1| SWIB/MDM2 domain-containing protein [Achromobacter xylosoxidans A8]
gi|421485314|ref|ZP_15932873.1| SWIB/MDM2 domain-containing protein [Achromobacter piechaudii HLE]
gi|422322600|ref|ZP_16403640.1| SWIB/MDM2 domain-containing protein [Achromobacter xylosoxidans
C54]
gi|423015696|ref|ZP_17006417.1| SWIB/MDM2 domain-containing protein [Achromobacter xylosoxidans
AXX-A]
gi|163258718|emb|CAP41017.1| conserved hypothetical protein [Bordetella petrii]
gi|292818134|gb|EFF77190.1| DNA topoisomerase domain protein [Achromobacter piechaudii ATCC
43553]
gi|310758678|gb|ADP14127.1| SWIB/MDM2 domain protein [Achromobacter xylosoxidans A8]
gi|317402438|gb|EFV83007.1| SWIB/MDM2 domain-containing protein [Achromobacter xylosoxidans
C54]
gi|338781199|gb|EGP45592.1| SWIB/MDM2 domain-containing protein [Achromobacter xylosoxidans
AXX-A]
gi|400196233|gb|EJO29210.1| SWIB/MDM2 domain-containing protein [Achromobacter piechaudii HLE]
Length = 92
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 47/68 (69%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
S EL AV+G A+PRTE+ K++W YI+K+NLQD SNKR I D LR +F D MF++
Sbjct: 24 SAELAAVIGSEAVPRTEVTKKIWEYIKKHNLQDASNKRNINADAKLRPIFGKDQVTMFEL 83
Query: 240 NKLLAKHI 247
KL+ H+
Sbjct: 84 TKLVNAHL 91
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%)
Query: 291 GGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEML 346
G + + E TK++WEYIK ++L+D N I DAKLR + G + ++ + +++
Sbjct: 32 GSEAVPRTEVTKKIWEYIKKHNLQDASNKRNINADAKLRPIFGKDQVTMFELTKLV 87
>gi|14488372|gb|AAK63939.1|AC084282_20 hypothetical protein [Oryza sativa Japonica Group]
gi|108711209|gb|ABF99004.1| SWIB complex BAF60b domain-containing protein, putative, expressed
[Oryza sativa Japonica Group]
gi|125545801|gb|EAY91940.1| hypothetical protein OsI_13627 [Oryza sativa Indica Group]
gi|215769247|dbj|BAH01476.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 144
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
Query: 172 GLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFET 231
GL K VSP LQAVVG +PRTE +K+LWAYI+++NLQDP++K+ I+CD+ L+V+F
Sbjct: 66 GLTKPRLVSPALQAVVGAAEIPRTEALKRLWAYIKQHNLQDPADKKVIVCDEKLKVLFAG 125
Query: 232 -DCTDMFKMNKLLAKHII 248
+ ++ KLL H +
Sbjct: 126 QERVGFLEVAKLLNPHFV 143
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 47/76 (61%), Gaps = 4/76 (5%)
Query: 279 IISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELL-GCESI 337
++S AL +G E+ + EA KR+W YIK ++L+DP + VI+CD KL+ L G E +
Sbjct: 72 LVSPALQAVVGAA--EIPRTEALKRLWAYIKQHNLQDPADKKVIVCDEKLKVLFAGQERV 129
Query: 338 SALGIQEMLARNHFLR 353
L + ++L HF++
Sbjct: 130 GFLEVAKLL-NPHFVK 144
>gi|384496998|gb|EIE87489.1| hypothetical protein RO3G_12200 [Rhizopus delemar RA 99-880]
Length = 335
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 93/185 (50%), Gaps = 8/185 (4%)
Query: 161 PVGAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKII 220
P K+R P + V P L ++ RT+ V ++W YIR++ LQD ++KR I
Sbjct: 113 PAEKKQREMP-----LLKVLPPLSNIIKTEYCSRTQTVSKMWDYIREHQLQDENDKRFIN 167
Query: 221 CDDALRVVFE-TDCTDMFKMNKLLAKHIIPLEPTKESSKRFKPDAESTTEGMESGPSSVI 279
CDD + + + T+ + F +NK L K+ L +++++ K D + + ++ P +
Sbjct: 168 CDDYFKELCDGTERINAFTINKYLQKYFEKLSDEEQAARNPKKDDQPPAKKVKKNPRDMP 227
Query: 280 ISEALAKFLG-TGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELL-GCESI 337
I + L + + ++WEYI+ ++L++P + +I CD K +EL G I
Sbjct: 228 IVKVLPPLSDIIKANYCSRTQTVSKIWEYIREHNLQNPADKRLIDCDEKFKELCDGQVQI 287
Query: 338 SALGI 342
S+ +
Sbjct: 288 SSFAL 292
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 157 KENPPVGAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
K++ P K + P + + V P L ++ RT+ V ++W YIR++NLQ+P++K
Sbjct: 210 KDDQPPAKKVKKNPRDM-PIVKVLPPLSDIIKANYCSRTQTVSKIWEYIREHNLQNPADK 268
Query: 217 RKIICDDALRVVFETDC-TDMFKMNKLLAKHIIPL 250
R I CD+ + + + F +NK K + +
Sbjct: 269 RLIDCDEKFKELCDGQVQISSFALNKYTQKCFVKI 303
>gi|237833393|ref|XP_002365994.1| SWIB/MDM2 domain-containing protein [Toxoplasma gondii ME49]
gi|211963658|gb|EEA98853.1| SWIB/MDM2 domain-containing protein [Toxoplasma gondii ME49]
gi|221508962|gb|EEE34531.1| SWIB/MDM2 domain-containing protein, putative [Toxoplasma gondii
VEG]
Length = 254
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 52/84 (61%)
Query: 164 AKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDD 223
AK + GP GL + C + L +G+ R E+VK +W YI+++NLQ P NKR I D
Sbjct: 162 AKPKRGPTGLQRPCDLKGPLATFMGKTEASRVEVVKHIWDYIKRHNLQSPENKRMINADS 221
Query: 224 ALRVVFETDCTDMFKMNKLLAKHI 247
LR +F+ D MF++NKLL+K +
Sbjct: 222 TLRPLFQKDQVSMFELNKLLSKFV 245
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 284 LAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQ 343
LA F+G E + E K +W+YIK ++L+ P N +I D+ LR L + +S +
Sbjct: 181 LATFMGK--TEASRVEVVKHIWDYIKRHNLQSPENKRMINADSTLRPLFQKDQVSMFELN 238
Query: 344 EMLAR 348
++L++
Sbjct: 239 KLLSK 243
>gi|67516157|ref|XP_657964.1| hypothetical protein AN0360.2 [Aspergillus nidulans FGSC A4]
gi|40746610|gb|EAA65766.1| hypothetical protein AN0360.2 [Aspergillus nidulans FGSC A4]
gi|259489402|tpe|CBF89645.1| TPA: SWIB/MDM2 domain protein (AFU_orthologue; AFUA_1G02020)
[Aspergillus nidulans FGSC A4]
Length = 279
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 63/98 (64%), Gaps = 6/98 (6%)
Query: 156 AKENPPVGAKRRGG-----PGGLNKVCGVSPELQAVVGQPA-MPRTEIVKQLWAYIRKNN 209
A+++ +G+ G GG +K +SP L A++G A + R + VK+LW YI +++
Sbjct: 177 AEDDSDIGSGSESGKKVNRSGGFHKPLNLSPALSALLGGAATLSRPQTVKKLWEYIHEHD 236
Query: 210 LQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHI 247
LQDPS++R+I CDD +R VF+ D MF M K+L++++
Sbjct: 237 LQDPSDRRQIRCDDPMRAVFKQDRIHMFTMTKILSQNL 274
Score = 44.3 bits (103), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISA 339
+S AL+ LG G + + + K++WEYI + L+DP + I CD +R + + I
Sbjct: 205 LSPALSALLG-GAATLSRPQTVKKLWEYIHEHDLQDPSDRRQIRCDDPMRAVFKQDRIHM 263
Query: 340 LGIQEMLARNHF 351
+ ++L++N +
Sbjct: 264 FTMTKILSQNLY 275
>gi|221488456|gb|EEE26670.1| SWIB/MDM2 domain-containing protein, putative [Toxoplasma gondii
GT1]
Length = 254
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 52/84 (61%)
Query: 164 AKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDD 223
AK + GP GL + C + L +G+ R E+VK +W YI+++NLQ P NKR I D
Sbjct: 162 AKPKRGPTGLQRPCDLKGPLATFMGKTEASRVEVVKHIWDYIKRHNLQSPENKRMINADS 221
Query: 224 ALRVVFETDCTDMFKMNKLLAKHI 247
LR +F+ D MF++NKLL+K +
Sbjct: 222 TLRPLFQKDQVSMFELNKLLSKFV 245
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 284 LAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQ 343
LA F+G E + E K +W+YIK ++L+ P N +I D+ LR L + +S +
Sbjct: 181 LATFMGK--TEASRVEVVKHIWDYIKRHNLQSPENKRMINADSTLRPLFQKDQVSMFELN 238
Query: 344 EMLAR 348
++L++
Sbjct: 239 KLLSK 243
>gi|33593966|ref|NP_881610.1| hypothetical protein BP3037 [Bordetella pertussis Tohama I]
gi|33603185|ref|NP_890745.1| hypothetical protein BB4210 [Bordetella bronchiseptica RB50]
gi|384205270|ref|YP_005591009.1| hypothetical protein BPTD_3002 [Bordetella pertussis CS]
gi|408416929|ref|YP_006627636.1| hypothetical protein BN118_3157 [Bordetella pertussis 18323]
gi|410421667|ref|YP_006902116.1| hypothetical protein BN115_3892 [Bordetella bronchiseptica MO149]
gi|410471648|ref|YP_006894929.1| hypothetical protein BN117_0920 [Bordetella parapertussis Bpp5]
gi|412341485|ref|YP_006970240.1| hypothetical protein BN112_4205 [Bordetella bronchiseptica 253]
gi|427816195|ref|ZP_18983259.1| conserved hypothetical protein [Bordetella bronchiseptica 1289]
gi|427818864|ref|ZP_18985927.1| conserved hypothetical protein [Bordetella bronchiseptica D445]
gi|427825292|ref|ZP_18992354.1| conserved hypothetical protein [Bordetella bronchiseptica Bbr77]
gi|33564040|emb|CAE43306.1| conserved hypothetical protein [Bordetella pertussis Tohama I]
gi|33568816|emb|CAE34574.1| conserved hypothetical protein [Bordetella bronchiseptica RB50]
gi|332383384|gb|AEE68231.1| hypothetical protein BPTD_3002 [Bordetella pertussis CS]
gi|401779099|emb|CCJ64582.1| conserved hypothetical protein [Bordetella pertussis 18323]
gi|408441758|emb|CCJ48253.1| conserved hypothetical protein [Bordetella parapertussis Bpp5]
gi|408448962|emb|CCJ60648.1| conserved hypothetical protein [Bordetella bronchiseptica MO149]
gi|408771319|emb|CCJ56119.1| conserved hypothetical protein [Bordetella bronchiseptica 253]
gi|410567195|emb|CCN24766.1| conserved hypothetical protein [Bordetella bronchiseptica 1289]
gi|410569864|emb|CCN17985.1| conserved hypothetical protein [Bordetella bronchiseptica D445]
gi|410590557|emb|CCN05648.1| conserved hypothetical protein [Bordetella bronchiseptica Bbr77]
Length = 92
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 47/68 (69%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
S EL AV+G A+PRTE+ K++W YI+K+NLQD SNKR I D LR +F D MF++
Sbjct: 24 SAELAAVIGSEAVPRTEVTKKIWDYIKKHNLQDASNKRNINADAKLRPIFGKDQVTMFEL 83
Query: 240 NKLLAKHI 247
KL+ H+
Sbjct: 84 TKLVNAHL 91
Score = 44.3 bits (103), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 34/56 (60%)
Query: 291 GGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEML 346
G + + E TK++W+YIK ++L+D N I DAKLR + G + ++ + +++
Sbjct: 32 GSEAVPRTEVTKKIWDYIKKHNLQDASNKRNINADAKLRPIFGKDQVTMFELTKLV 87
>gi|255730345|ref|XP_002550097.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240132054|gb|EER31612.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 230
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 55/85 (64%)
Query: 173 LNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETD 232
N+ +SP+L +V+G R ++VK LW+YI+ NNLQ+P++KR+I CD+ L VF+
Sbjct: 111 FNREMYLSPDLTSVIGVEKTSRPKVVKLLWSYIKDNNLQNPNDKRQIECDEKLYRVFKKK 170
Query: 233 CTDMFKMNKLLAKHIIPLEPTKESS 257
F+MNKLL+ HI E +S+
Sbjct: 171 SVGAFEMNKLLSNHIFKPEDWDDST 195
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 300 ATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNHFLR 353
K +W YIK N+L++P + I CD KL + +S+ A + ++L+ NH +
Sbjct: 135 VVKLLWSYIKDNNLQNPNDKRQIECDEKLYRVFKKKSVGAFEMNKLLS-NHIFK 187
>gi|358366934|dbj|GAA83554.1| C2H2 finger domain protein [Aspergillus kawachii IFO 4308]
Length = 1111
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 74/127 (58%), Gaps = 7/127 (5%)
Query: 143 SKAEAFPQISAEVAKE--NPPVGAKRRGGPGGLNKVCGVSPELQAVV-GQPAMPRTEIVK 199
+KA+ ++ AE E + K+ GG +K +SP L A++ G+ + R + VK
Sbjct: 179 TKAKTSKKVKAEDDSELESGSDSGKKVNRSGGFHKPLTLSPALSALLDGEVTLSRPQTVK 238
Query: 200 QLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKH----IIPLEPTKE 255
+LW YI +++LQDP+++R+I CDDA+R VF+ D MF M K+L+++ + PL
Sbjct: 239 RLWQYIHEHDLQDPNDRRQIRCDDAMRAVFKQDRIHMFTMTKILSQNFNAGLSPLRRNSL 298
Query: 256 SSKRFKP 262
S +R P
Sbjct: 299 SGRRGSP 305
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 57/110 (51%), Gaps = 12/110 (10%)
Query: 251 EPTK-ESSKRFKPDAESTTE-GMESGPSS---------VIISEALAKFLGTGGREMLQAE 299
+PTK ++SK+ K + +S E G +SG + +S AL+ L G + + +
Sbjct: 177 QPTKAKTSKKVKAEDDSELESGSDSGKKVNRSGGFHKPLTLSPALSALLD-GEVTLSRPQ 235
Query: 300 ATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARN 349
KR+W+YI + L+DP + I CD +R + + I + ++L++N
Sbjct: 236 TVKRLWQYIHEHDLQDPNDRRQIRCDDAMRAVFKQDRIHMFTMTKILSQN 285
>gi|401408355|ref|XP_003883626.1| hypothetical protein NCLIV_033810 [Neospora caninum Liverpool]
gi|325118043|emb|CBZ53594.1| hypothetical protein NCLIV_033810 [Neospora caninum Liverpool]
Length = 232
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 58/99 (58%)
Query: 149 PQISAEVAKENPPVGAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKN 208
P + A + P A ++ GP GL + C ++ L +G+ R E+VK +W YI+++
Sbjct: 125 PHGTHSGAPSDKPNEAGKKRGPTGLQRPCDLTGPLATFMGKTEASRVEVVKHIWDYIKRH 184
Query: 209 NLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHI 247
NLQ P NKR I D LR +F+ D MF++NKL++K +
Sbjct: 185 NLQSPENKRMINADSTLRPLFQKDQVSMFELNKLVSKFV 223
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 262 PDAESTTEGMESGPSSV----IISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPL 317
P + G + GP+ + ++ LA F+G E + E K +W+YIK ++L+ P
Sbjct: 133 PSDKPNEAGKKRGPTGLQRPCDLTGPLATFMGK--TEASRVEVVKHIWDYIKRHNLQSPE 190
Query: 318 NSMVILCDAKLRELLGCESISALGIQEMLAR 348
N +I D+ LR L + +S + +++++
Sbjct: 191 NKRMINADSTLRPLFQKDQVSMFELNKLVSK 221
>gi|121703351|ref|XP_001269940.1| SWIB/MDM2 domain protein [Aspergillus clavatus NRRL 1]
gi|119398083|gb|EAW08514.1| SWIB/MDM2 domain protein [Aspergillus clavatus NRRL 1]
Length = 287
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
Query: 171 GGLNKVCGVSPELQAVV-GQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF 229
GG +K +SP L A++ G+ + R + VK+LW YIR+++LQDP+++R+I CDDA+R VF
Sbjct: 205 GGFHKPLNLSPPLSALLDGEVTLSRPQTVKRLWQYIREHDLQDPNDRRQIRCDDAMRAVF 264
Query: 230 ETDCTDMFKMNKLLAKHI 247
+ D MF M K+L +++
Sbjct: 265 KQDRIHMFTMTKILNQNL 282
>gi|147843362|emb|CAN78429.1| hypothetical protein VITISV_011142 [Vitis vinifera]
Length = 145
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 65/116 (56%), Gaps = 5/116 (4%)
Query: 134 PPPQPHSNVSKAEAFPQISAEVAKENPPVGAKRRGGPGGLNKVCGVSPELQAVVGQPAMP 193
PPP PH+N+ +A KR P G+ K +SPE+Q +G P +P
Sbjct: 33 PPPSPHTNLRLVRTVTSAAASKPPAA--ATGKRE--PRGIMKPRRISPEMQDFLGVPEIP 88
Query: 194 RTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFE-TDCTDMFKMNKLLAKHII 248
RT+ +KQ+WAYI+++NLQDP NK+ I+CD+ L+ +F D ++ L+ H +
Sbjct: 89 RTQALKQIWAYIKQHNLQDPENKKIIVCDEKLKSIFAGKDRVGFLEIAGLINPHFL 144
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELL-GCESIS 338
IS + FLG E+ + +A K++W YIK ++L+DP N +I+CD KL+ + G + +
Sbjct: 74 ISPEMQDFLGVP--EIPRTQALKQIWAYIKQHNLQDPENKKIIVCDEKLKSIFAGKDRVG 131
Query: 339 ALGIQEMLARNHFLR 353
L I ++ HFL+
Sbjct: 132 FLEIAGLI-NPHFLK 145
>gi|320587329|gb|EFW99809.1| swib mdm2 domain containing protein [Grosmannia clavigera kw1407]
Length = 285
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 53/81 (65%), Gaps = 5/81 (6%)
Query: 171 GGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFE 230
GG K +S +L +VG +++VK+LW YI+ ++LQDP +KR+I CDD ++ VF+
Sbjct: 207 GGFQKPFNLSDQLSELVGS-----SQVVKKLWVYIKAHDLQDPLDKRQIRCDDKMQAVFQ 261
Query: 231 TDCTDMFKMNKLLAKHIIPLE 251
MF+MNKLL H+ P+E
Sbjct: 262 QQRVGMFQMNKLLGSHLYPVE 282
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/72 (23%), Positives = 40/72 (55%), Gaps = 7/72 (9%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISA 339
+S+ L++ +G+ ++ K++W YIK + L+DPL+ I CD K++ + + +
Sbjct: 215 LSDQLSELVGS-------SQVVKKLWVYIKAHDLQDPLDKRQIRCDDKMQAVFQQQRVGM 267
Query: 340 LGIQEMLARNHF 351
+ ++L + +
Sbjct: 268 FQMNKLLGSHLY 279
>gi|225429337|ref|XP_002272147.1| PREDICTED: upstream activation factor subunit spp27 [Vitis
vinifera]
Length = 145
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 65/116 (56%), Gaps = 5/116 (4%)
Query: 134 PPPQPHSNVSKAEAFPQISAEVAKENPPVGAKRRGGPGGLNKVCGVSPELQAVVGQPAMP 193
PPP PH+N+ +A KR P G+ K +SPE+Q +G P +P
Sbjct: 33 PPPSPHTNLRLVRTVTSAAASKPPAA--ATGKRE--PRGIMKPRRISPEMQDFLGVPEIP 88
Query: 194 RTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFE-TDCTDMFKMNKLLAKHII 248
RT+ +KQ+WAYI+++NLQDP NK+ I+CD+ L+ +F D ++ L+ H +
Sbjct: 89 RTQALKQIWAYIKQHNLQDPENKKIIVCDEKLKSIFAGKDRVGFLEIAGLINPHFL 144
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELL-GCESIS 338
IS + FLG E+ + +A K++W YIK ++L+DP N +I+CD KL+ + G + +
Sbjct: 74 ISPEMQDFLGVP--EIPRTQALKQIWAYIKQHNLQDPENKKIIVCDEKLKSIFAGKDRVG 131
Query: 339 ALGIQEMLARNHFLR 353
L I ++ HFL+
Sbjct: 132 FLEIAGLI-NPHFLK 145
>gi|424777976|ref|ZP_18204933.1| hypothetical protein C660_13442 [Alcaligenes sp. HPC1271]
gi|422887172|gb|EKU29579.1| hypothetical protein C660_13442 [Alcaligenes sp. HPC1271]
Length = 92
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 48/68 (70%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
SP L AV+G A+PRTE+ K++W YI+K++LQDP N+R I D LR +F D MF++
Sbjct: 24 SPTLAAVIGSGALPRTEVTKKIWEYIKKHDLQDPKNRRNINADAKLRPLFGKDQVSMFEL 83
Query: 240 NKLLAKHI 247
KL++ H+
Sbjct: 84 TKLVSAHL 91
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 281 SEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISAL 340
S LA +G+G + + E TK++WEYIK + L+DP N I DAKLR L G + +S
Sbjct: 24 SPTLAAVIGSGA--LPRTEVTKKIWEYIKKHDLQDPKNRRNINADAKLRPLFGKDQVSMF 81
Query: 341 GIQEMLA 347
+ ++++
Sbjct: 82 ELTKLVS 88
>gi|328858897|gb|EGG08008.1| hypothetical protein MELLADRAFT_77485 [Melampsora larici-populina
98AG31]
Length = 304
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%)
Query: 172 GLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFET 231
G++K SP L ++G R ++VK++W +I+ N+LQDP +KR+IICD+ ++ VF
Sbjct: 195 GIHKEMNCSPALGDLIGVLTCSRPQVVKKIWEHIKANDLQDPKDKRQIICDEKMKAVFNV 254
Query: 232 DCTDMFKMNKLLAKHI 247
MF MNKLL H+
Sbjct: 255 KTVHMFTMNKLLGDHL 270
Score = 44.3 bits (103), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 30/49 (61%)
Query: 299 EATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLA 347
+ K++WE+IK N L+DP + I+CD K++ + +++ + ++L
Sbjct: 219 QVVKKIWEHIKANDLQDPKDKRQIICDEKMKAVFNVKTVHMFTMNKLLG 267
>gi|393759562|ref|ZP_10348375.1| hypothetical protein QWA_10586 [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
gi|393162123|gb|EJC62184.1| hypothetical protein QWA_10586 [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
Length = 92
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 48/68 (70%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
SP L AV+G A+PRTE+ K++W YI+K++LQDP N+R I D LR +F D MF++
Sbjct: 24 SPTLAAVIGSDALPRTEVTKKIWEYIKKHDLQDPKNRRNINADAKLRPLFGKDQVSMFEL 83
Query: 240 NKLLAKHI 247
KL++ H+
Sbjct: 84 TKLVSAHL 91
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 281 SEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISAL 340
S LA +G+ + + E TK++WEYIK + L+DP N I DAKLR L G + +S
Sbjct: 24 SPTLAAVIGSDA--LPRTEVTKKIWEYIKKHDLQDPKNRRNINADAKLRPLFGKDQVSMF 81
Query: 341 GIQEMLA 347
+ ++++
Sbjct: 82 ELTKLVS 88
>gi|71991610|ref|NP_498159.2| Protein T24G10.2 [Caenorhabditis elegans]
gi|373219985|emb|CCD71519.1| Protein T24G10.2 [Caenorhabditis elegans]
Length = 347
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 49/81 (60%)
Query: 168 GGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRV 227
G G + K+C +S ELQ V M R ++VK LW YI++NNL+DP N + IICD L
Sbjct: 191 GVFGPMTKLCYISTELQQVTKDQWMKRCDVVKALWDYIKENNLKDPKNGQYIICDSTLES 250
Query: 228 VFETDCTDMFKMNKLLAKHII 248
+F+ + F M K L +HII
Sbjct: 251 IFKKNRLKGFGMVKFLTRHII 271
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%)
Query: 295 MLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLAR 348
M + + K +W+YIK N+L+DP N I+CD+ L + + G+ + L R
Sbjct: 215 MKRCDVVKALWDYIKENNLKDPKNGQYIICDSTLESIFKKNRLKGFGMVKFLTR 268
>gi|426403308|ref|YP_007022279.1| hypothetical protein Bdt_1313 [Bdellovibrio bacteriovorus str.
Tiberius]
gi|425859976|gb|AFY01012.1| hypothetical protein Bdt_1313 [Bdellovibrio bacteriovorus str.
Tiberius]
Length = 139
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDC-TDMFK 238
S L AVVG +PRTE+VK+LWAYI+KNNLQD NKR I D L+ VF MF
Sbjct: 70 SAALAAVVGASPLPRTEVVKKLWAYIKKNNLQDAKNKRNINADAKLKEVFGGKTQVSMFD 129
Query: 239 MNKLLAKHI 247
M KL++KH+
Sbjct: 130 MTKLVSKHL 138
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 281 SEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCES-ISA 339
S ALA +G + + E K++W YIK N+L+D N I DAKL+E+ G ++ +S
Sbjct: 70 SAALAAVVGAS--PLPRTEVVKKLWAYIKKNNLQDAKNKRNINADAKLKEVFGGKTQVSM 127
Query: 340 LGIQEMLAR 348
+ +++++
Sbjct: 128 FDMTKLVSK 136
>gi|406606814|emb|CCH41850.1| Dynamin-binding protein [Wickerhamomyces ciferrii]
Length = 1011
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 56/70 (80%), Gaps = 1/70 (1%)
Query: 178 GVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMF 237
+SP+L +G+ +PRT++VK++W Y+++N+LQ+P++KR+I+CDD ++ VF T MF
Sbjct: 938 NLSPKLAEFLGEQKLPRTQVVKKVWEYVKENDLQNPNDKREILCDDKMQGVFGKKVT-MF 996
Query: 238 KMNKLLAKHI 247
++NK+L++H+
Sbjct: 997 QLNKVLSQHL 1006
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 49/75 (65%), Gaps = 3/75 (4%)
Query: 277 SVIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCES 336
S+ +S LA+FLG +++ + + K+VWEY+K N L++P + ILCD K++ + G +
Sbjct: 936 SLNLSPKLAEFLGE--QKLPRTQVVKKVWEYVKENDLQNPNDKREILCDDKMQGVFG-KK 992
Query: 337 ISALGIQEMLARNHF 351
++ + ++L+++ +
Sbjct: 993 VTMFQLNKVLSQHLY 1007
>gi|357484389|ref|XP_003612482.1| Upstream activation factor subunit UAF30 [Medicago truncatula]
gi|355513817|gb|AES95440.1| Upstream activation factor subunit UAF30 [Medicago truncatula]
gi|388497934|gb|AFK37033.1| unknown [Medicago truncatula]
Length = 134
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 170 PGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF 229
GG+ KV V+ EL +G P + RTE VK++W YI+ NLQ+P+NK++I CDD L+ +F
Sbjct: 52 TGGIQKVVQVTSELGNFIGAPEVSRTEAVKKVWEYIKLQNLQNPNNKKEIFCDDKLKTIF 111
Query: 230 ETDCTDMF-KMNKLLAKHII 248
+ +F ++ KLLA H +
Sbjct: 112 DGKDKVVFTEIAKLLATHFV 131
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 265 ESTTEGMESGPSSVI-ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVIL 323
++ T G V+ ++ L F+G E+ + EA K+VWEYIK+ +L++P N I
Sbjct: 45 KTVTSKSTGGIQKVVQVTSELGNFIG--APEVSRTEAVKKVWEYIKLQNLQNPNNKKEIF 102
Query: 324 CDAKLRELL-GCESISALGIQEMLARNHFLRQS 355
CD KL+ + G + + I ++LA HF++ +
Sbjct: 103 CDDKLKTIFDGKDKVVFTEIAKLLA-THFVKST 134
>gi|254586179|ref|XP_002498657.1| ZYRO0G15576p [Zygosaccharomyces rouxii]
gi|238941551|emb|CAR29724.1| ZYRO0G15576p [Zygosaccharomyces rouxii]
Length = 254
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 64/114 (56%), Gaps = 13/114 (11%)
Query: 171 GGLNKVCGVSPE-LQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF 229
GG NK + E L ++G+ RT++VK +W YI++NNLQ+P+++R+I+CDD ++ VF
Sbjct: 110 GGFNKTRVLLAEPLSELLGETESTRTQVVKSVWDYIKRNNLQNPNDRREILCDDRMKPVF 169
Query: 230 ETDCTDMFKMNKLLAKHIIPLEPTKESSKRFKPDAESTTEGMESGPSSVIISEA 283
T MF MNK LAK+I R PD + S P V+ E+
Sbjct: 170 GEKVT-MFSMNKELAKYI-----------RNAPDTATAPTATNSSPPPVVKEES 211
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 48/78 (61%), Gaps = 5/78 (6%)
Query: 278 VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESI 337
V+++E L++ LG E + + K VW+YIK N+L++P + ILCD +++ + G E +
Sbjct: 117 VLLAEPLSELLGET--ESTRTQVVKSVWDYIKRNNLQNPNDRREILCDDRMKPVFG-EKV 173
Query: 338 SALGIQEMLARNHFLRQS 355
+ + + LA+ ++R +
Sbjct: 174 TMFSMNKELAK--YIRNA 189
>gi|42522857|ref|NP_968237.1| hypothetical protein Bd1337 [Bdellovibrio bacteriovorus HD100]
gi|39574053|emb|CAE79230.1| conserved hypothetical protein [Bdellovibrio bacteriovorus HD100]
Length = 140
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDC-TDMFK 238
S L AVVG +PRTE+VK+LWAYI+KNNLQD NKR I D L+ VF MF
Sbjct: 71 SAALAAVVGASPLPRTEVVKKLWAYIKKNNLQDTKNKRNINADAKLKEVFGGKTQVSMFD 130
Query: 239 MNKLLAKHI 247
M KL++KH+
Sbjct: 131 MTKLVSKHL 139
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 281 SEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCES-ISA 339
S ALA +G + + E K++W YIK N+L+D N I DAKL+E+ G ++ +S
Sbjct: 71 SAALAAVVGAS--PLPRTEVVKKLWAYIKKNNLQDTKNKRNINADAKLKEVFGGKTQVSM 128
Query: 340 LGIQEMLAR 348
+ +++++
Sbjct: 129 FDMTKLVSK 137
>gi|156390228|ref|XP_001635173.1| predicted protein [Nematostella vectensis]
gi|156222264|gb|EDO43110.1| predicted protein [Nematostella vectensis]
Length = 1583
Score = 77.8 bits (190), Expect = 8e-12, Method: Composition-based stats.
Identities = 44/107 (41%), Positives = 59/107 (55%), Gaps = 10/107 (9%)
Query: 141 NVSKAEAFPQISAEVAKENPPVGAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQ 200
+V KA+ PQ + P G K G G K+ +SPEL A++GQ M R+++VK
Sbjct: 1480 SVKKAQKTPQ-------KKEPSGTK---GKTGFGKLMVLSPELAAILGQDKMSRSDVVKG 1529
Query: 201 LWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHI 247
+WA I++ NL DP +KR ICDD L VF T F M K L H+
Sbjct: 1530 MWAIIKERNLMDPKDKRFHICDDQLLKVFGTKRVKSFSMMKYLKHHV 1576
Score = 37.7 bits (86), Expect = 9.5, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 47/96 (48%), Gaps = 2/96 (2%)
Query: 251 EPTKESSKRFKPDAESTTEGMESGPSSVIISEALAKFLGTGGREMLQAEATKRVWEYIKV 310
+ K++ K + S T+G +++S LA LG +M +++ K +W IK
Sbjct: 1479 QSVKKAQKTPQKKEPSGTKGKTGFGKLMVLSPELAAILGQD--KMSRSDVVKGMWAIIKE 1536
Query: 311 NHLEDPLNSMVILCDAKLRELLGCESISALGIQEML 346
+L DP + +CD +L ++ G + + + + + L
Sbjct: 1537 RNLMDPKDKRFHICDDQLLKVFGTKRVKSFSMMKYL 1572
>gi|15605187|ref|NP_219973.1| SWIB (YM74) complex protein [Chlamydia trachomatis D/UW-3/CX]
gi|76789196|ref|YP_328282.1| SwiB complex protein [Chlamydia trachomatis A/HAR-13]
gi|237802888|ref|YP_002888082.1| hypothetical protein JALI_4621 [Chlamydia trachomatis B/Jali20/OT]
gi|237804810|ref|YP_002888964.1| hypothetical protein CTB_4621 [Chlamydia trachomatis B/TZ1A828/OT]
gi|255311272|ref|ZP_05353842.1| hypothetical protein Ctra62_02400 [Chlamydia trachomatis 6276]
gi|255317574|ref|ZP_05358820.1| hypothetical protein Ctra6_02395 [Chlamydia trachomatis 6276s]
gi|376282469|ref|YP_005156295.1| hypothetical protein CTR_4621 [Chlamydia trachomatis A2497]
gi|385239983|ref|YP_005807825.1| hypothetical protein G9768_02400 [Chlamydia trachomatis G/9768]
gi|385240907|ref|YP_005808748.1| hypothetical protein G11222_02405 [Chlamydia trachomatis G/11222]
gi|385242761|ref|YP_005810600.1| hypothetical protein CTG9301_02410 [Chlamydia trachomatis G/9301]
gi|385243668|ref|YP_005811514.1| hypothetical protein CTDEC_0460 [Chlamydia trachomatis D-EC]
gi|385244548|ref|YP_005812392.1| hypothetical protein CTDLC_0460 [Chlamydia trachomatis D-LC]
gi|385246370|ref|YP_005815192.1| hypothetical protein G11074_02405 [Chlamydia trachomatis G/11074]
gi|385270160|ref|YP_005813320.1| hypothetical protein [Chlamydia trachomatis A2497]
gi|3328894|gb|AAC68060.1| SWIB (YM74) complex protein [Chlamydia trachomatis D/UW-3/CX]
gi|76167726|gb|AAX50734.1| SwiB complex protein [Chlamydia trachomatis A/HAR-13]
gi|231273110|emb|CAX10023.1| conserved hypothetical protein [Chlamydia trachomatis B/TZ1A828/OT]
gi|231274122|emb|CAX10916.1| conserved hypothetical protein [Chlamydia trachomatis B/Jali20/OT]
gi|296435988|gb|ADH18162.1| hypothetical protein G9768_02400 [Chlamydia trachomatis G/9768]
gi|296436915|gb|ADH19085.1| hypothetical protein G11222_02405 [Chlamydia trachomatis G/11222]
gi|296437849|gb|ADH20010.1| hypothetical protein G11074_02405 [Chlamydia trachomatis G/11074]
gi|297140349|gb|ADH97107.1| hypothetical protein CTG9301_02410 [Chlamydia trachomatis G/9301]
gi|297748591|gb|ADI51137.1| hypothetical protein CTDEC_0460 [Chlamydia trachomatis D-EC]
gi|297749471|gb|ADI52149.1| hypothetical protein CTDLC_0460 [Chlamydia trachomatis D-LC]
gi|347975300|gb|AEP35321.1| hypothetical protein CTO_0503 [Chlamydia trachomatis A2497]
gi|371908499|emb|CAX09129.1| conserved hypothetical protein [Chlamydia trachomatis A2497]
gi|438690393|emb|CCP49650.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis A/7249]
gi|438691478|emb|CCP48752.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis A/5291]
gi|438692851|emb|CCP47853.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis A/363]
gi|440525382|emb|CCP50633.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis K/SotonK1]
gi|440528059|emb|CCP53543.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis D/SotonD5]
gi|440528949|emb|CCP54433.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis D/SotonD6]
gi|440532524|emb|CCP58034.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis G/SotonG1]
gi|440533417|emb|CCP58927.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis Ia/SotonIa1]
gi|440534311|emb|CCP59821.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis Ia/SotonIa3]
Length = 86
Score = 77.8 bits (190), Expect = 8e-12, Method: Composition-based stats.
Identities = 40/71 (56%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETD-CTDMF 237
VS +L A+VG MPRTEI+K++W YI+KN LQDP+NKR I DD L VF T+ DMF
Sbjct: 15 VSADLAAIVGAGPMPRTEIIKKMWDYIKKNGLQDPTNKRNINPDDKLAKVFGTEKPIDMF 74
Query: 238 KMNKLLAKHII 248
+M K++++HII
Sbjct: 75 QMTKMVSQHII 85
Score = 38.9 bits (89), Expect = 3.6, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 278 VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCE 335
V +S LA +G G M + E K++W+YIK N L+DP N I D KL ++ G E
Sbjct: 13 VNVSADLAAIVGAG--PMPRTEIIKKMWDYIKKNGLQDPTNKRNINPDDKLAKVFGTE 68
>gi|300175265|emb|CBK20576.2| unnamed protein product [Blastocystis hominis]
Length = 100
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 47/71 (66%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+S EL A VGQ MPR ++VK W+Y ++ NLQDP NK+ I+CD+ LR +F + F
Sbjct: 28 LSEELAAFVGQSEMPRPQLVKVFWSYFKEKNLQDPQNKQMILCDEPLRALFGEERIRAFA 87
Query: 239 MNKLLAKHIIP 249
+ K L KHIIP
Sbjct: 88 LMKYLNKHIIP 98
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISA 339
+SE LA F+G EM + + K W Y K +L+DP N +ILCD LR L G E I A
Sbjct: 28 LSEELAAFVGQS--EMPRPQLVKVFWSYFKEKNLQDPQNKQMILCDEPLRALFGEERIRA 85
Query: 340 LGIQEMLARN 349
+ + L ++
Sbjct: 86 FALMKYLNKH 95
>gi|238483641|ref|XP_002373059.1| SWIB/MDM2 domain protein [Aspergillus flavus NRRL3357]
gi|317139998|ref|XP_001817901.2| SWIB/MDM2 domain protein [Aspergillus oryzae RIB40]
gi|220701109|gb|EED57447.1| SWIB/MDM2 domain protein [Aspergillus flavus NRRL3357]
Length = 277
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 57/78 (73%), Gaps = 1/78 (1%)
Query: 171 GGLNKVCGVSPELQAVVG-QPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF 229
GG +K +SP L A++G + ++ R + VK++WAYIR++ LQDP+++R+I CD+ +R VF
Sbjct: 195 GGFHKPLTLSPALSALLGGEESLSRPQTVKKVWAYIREHELQDPTDRRQIRCDEPMRAVF 254
Query: 230 ETDCTDMFKMNKLLAKHI 247
+ D MF M K+L++++
Sbjct: 255 KQDRIHMFTMTKILSQNL 272
Score = 45.1 bits (105), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 278 VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESI 337
+ +S AL+ LG G + + + K+VW YI+ + L+DP + I CD +R + + I
Sbjct: 201 LTLSPALSALLG-GEESLSRPQTVKKVWAYIREHELQDPTDRRQIRCDEPMRAVFKQDRI 259
Query: 338 SALGIQEMLARNHF 351
+ ++L++N +
Sbjct: 260 HMFTMTKILSQNLY 273
>gi|15835359|ref|NP_297118.1| hypothetical protein TC0745 [Chlamydia muridarum Nigg]
gi|270285535|ref|ZP_06194929.1| hypothetical protein CmurN_03778 [Chlamydia muridarum Nigg]
gi|270289546|ref|ZP_06195848.1| hypothetical protein CmurW_03878 [Chlamydia muridarum Weiss]
gi|301336932|ref|ZP_07225134.1| hypothetical protein CmurM_03835 [Chlamydia muridarum MopnTet14]
gi|7190773|gb|AAF39552.1| conserved hypothetical protein [Chlamydia muridarum Nigg]
Length = 86
Score = 77.4 bits (189), Expect = 9e-12, Method: Composition-based stats.
Identities = 39/71 (54%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFET-DCTDMF 237
VS +L A+VG MPRTEI+K++W YI++N LQDP+NKR I DD L VF + D DMF
Sbjct: 15 VSSDLAAIVGTGPMPRTEIIKKIWDYIKQNKLQDPTNKRNINPDDKLAKVFGSKDPVDMF 74
Query: 238 KMNKLLAKHII 248
+M K+++KHI+
Sbjct: 75 QMTKIVSKHIV 85
Score = 40.8 bits (94), Expect = 1.1, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 278 VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLG 333
V +S LA +GTG M + E K++W+YIK N L+DP N I D KL ++ G
Sbjct: 13 VNVSSDLAAIVGTG--PMPRTEIIKKIWDYIKQNKLQDPTNKRNINPDDKLAKVFG 66
>gi|83765756|dbj|BAE55899.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 270
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 57/78 (73%), Gaps = 1/78 (1%)
Query: 171 GGLNKVCGVSPELQAVVG-QPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF 229
GG +K +SP L A++G + ++ R + VK++WAYIR++ LQDP+++R+I CD+ +R VF
Sbjct: 188 GGFHKPLTLSPALSALLGGEESLSRPQTVKKVWAYIREHELQDPTDRRQIRCDEPMRAVF 247
Query: 230 ETDCTDMFKMNKLLAKHI 247
+ D MF M K+L++++
Sbjct: 248 KQDRIHMFTMTKILSQNL 265
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 278 VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESI 337
+ +S AL+ LG G + + + K+VW YI+ + L+DP + I CD +R + + I
Sbjct: 194 LTLSPALSALLG-GEESLSRPQTVKKVWAYIREHELQDPTDRRQIRCDEPMRAVFKQDRI 252
Query: 338 SALGIQEMLARNHF 351
+ ++L++N +
Sbjct: 253 HMFTMTKILSQNLY 266
>gi|255348833|ref|ZP_05380840.1| hypothetical protein Ctra70_02450 [Chlamydia trachomatis 70]
gi|255503373|ref|ZP_05381763.1| hypothetical protein Ctra7_02460 [Chlamydia trachomatis 70s]
gi|255507051|ref|ZP_05382690.1| hypothetical protein CtraD_02435 [Chlamydia trachomatis D(s)2923]
gi|385241838|ref|YP_005809678.1| hypothetical protein E11023_02415 [Chlamydia trachomatis E/11023]
gi|385245445|ref|YP_005814268.1| hypothetical protein E150_02430 [Chlamydia trachomatis E/150]
gi|386262817|ref|YP_005816096.1| hypothetical protein SW2_4691 [Chlamydia trachomatis Sweden2]
gi|389858156|ref|YP_006360398.1| hypothetical protein FSW4_4691 [Chlamydia trachomatis F/SW4]
gi|389859032|ref|YP_006361273.1| hypothetical protein ESW3_4691 [Chlamydia trachomatis E/SW3]
gi|389859908|ref|YP_006362148.1| hypothetical protein FSW5_4691 [Chlamydia trachomatis F/SW5]
gi|289525505|emb|CBJ14982.1| conserved hypothetical protein [Chlamydia trachomatis Sweden2]
gi|296435061|gb|ADH17239.1| hypothetical protein E150_02430 [Chlamydia trachomatis E/150]
gi|296438781|gb|ADH20934.1| hypothetical protein E11023_02415 [Chlamydia trachomatis E/11023]
gi|380249228|emb|CCE14520.1| conserved hypothetical protein [Chlamydia trachomatis F/SW5]
gi|380250103|emb|CCE13631.1| conserved hypothetical protein [Chlamydia trachomatis F/SW4]
gi|380250981|emb|CCE12742.1| conserved hypothetical protein [Chlamydia trachomatis E/SW3]
gi|440527167|emb|CCP52651.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis D/SotonD1]
gi|440529841|emb|CCP55325.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis E/SotonE4]
gi|440530740|emb|CCP56224.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis E/SotonE8]
gi|440531631|emb|CCP57141.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis F/SotonF3]
gi|440535208|emb|CCP60718.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis E/Bour]
Length = 86
Score = 77.4 bits (189), Expect = 9e-12, Method: Composition-based stats.
Identities = 40/71 (56%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETD-CTDMF 237
VS +L A+VG MPRTEI+K++W YI+KN+LQDP+NKR I DD L VF T+ DMF
Sbjct: 15 VSADLAAIVGAGPMPRTEIIKKMWDYIKKNSLQDPTNKRNINPDDKLAKVFGTEKPIDMF 74
Query: 238 KMNKLLAKHII 248
+M K++++HII
Sbjct: 75 QMTKMVSQHII 85
Score = 39.3 bits (90), Expect = 3.2, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 278 VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCE 335
V +S LA +G G M + E K++W+YIK N L+DP N I D KL ++ G E
Sbjct: 13 VNVSADLAAIVGAG--PMPRTEIIKKMWDYIKKNSLQDPTNKRNINPDDKLAKVFGTE 68
>gi|258569228|ref|XP_002585358.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237906804|gb|EEP81205.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 264
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Query: 171 GGLNKVCGVSPELQAVV-GQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF 229
GG +K +SP L A+ G+ ++ R + VK++W YIR+N LQDP+++R+I CDD +R VF
Sbjct: 182 GGFHKPLNLSPALSALFDGEVSLSRPQTVKRIWQYIRENKLQDPADRRQIRCDDRMRAVF 241
Query: 230 ETDCTDMFKMNKLLAKHI 247
+ D MF M K+L +++
Sbjct: 242 KQDRVHMFTMTKILNQNL 259
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 31/53 (58%)
Query: 299 EATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNHF 351
+ KR+W+YI+ N L+DP + I CD ++R + + + + ++L +N +
Sbjct: 208 QTVKRIWQYIRENKLQDPADRRQIRCDDRMRAVFKQDRVHMFTMTKILNQNLY 260
>gi|33598274|ref|NP_885917.1| hypothetical protein BPP3764 [Bordetella parapertussis 12822]
gi|33566832|emb|CAE39047.1| conserved hypothetical protein [Bordetella parapertussis]
Length = 92
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 47/68 (69%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
S EL AV+G A+PRTE+ K++W YI+K+NLQD SNKR I D LR +F D MF++
Sbjct: 24 SAELAAVIGSEAVPRTEVTKKIWDYIKKHNLQDASNKRNINADAKLRPIFGKDQVMMFEL 83
Query: 240 NKLLAKHI 247
KL+ H+
Sbjct: 84 TKLVNAHL 91
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 33/56 (58%)
Query: 291 GGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEML 346
G + + E TK++W+YIK ++L+D N I DAKLR + G + + + +++
Sbjct: 32 GSEAVPRTEVTKKIWDYIKKHNLQDASNKRNINADAKLRPIFGKDQVMMFELTKLV 87
>gi|337280016|ref|YP_004619488.1| hypothetical protein Rta_23710 [Ramlibacter tataouinensis TTB310]
gi|334731093|gb|AEG93469.1| Conserved hypothetical protein [Ramlibacter tataouinensis TTB310]
Length = 146
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 46/68 (67%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
SP+L AVVG +PRTE+V +LWAYI+KN LQD +NKR + D L+ +F MF+M
Sbjct: 78 SPQLAAVVGSNPLPRTEVVSKLWAYIKKNKLQDSANKRMVNADAKLKDIFGKSQVSMFEM 137
Query: 240 NKLLAKHI 247
L+ KH+
Sbjct: 138 AGLIGKHV 145
Score = 41.2 bits (95), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 29/52 (55%)
Query: 297 QAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLAR 348
+ E ++W YIK N L+D N ++ DAKL+++ G +S + ++ +
Sbjct: 92 RTEVVSKLWAYIKKNKLQDSANKRMVNADAKLKDIFGKSQVSMFEMAGLIGK 143
>gi|120611529|ref|YP_971207.1| SWIB/MDM2 domain-containing protein [Acidovorax citrulli AAC00-1]
gi|326317181|ref|YP_004234853.1| SWIB/MDM2 domain-containing protein [Acidovorax avenae subsp.
avenae ATCC 19860]
gi|120589993|gb|ABM33433.1| SWIB/MDM2 domain protein [Acidovorax citrulli AAC00-1]
gi|323374017|gb|ADX46286.1| SWIB/MDM2 domain-containing protein [Acidovorax avenae subsp.
avenae ATCC 19860]
Length = 101
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 45/68 (66%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
SP L AVVG +PRTEI+ +LWAYI+ NNLQD +NKR I D L+ VF MF+M
Sbjct: 33 SPALAAVVGSDPLPRTEIISKLWAYIKANNLQDAANKRMINADAKLKEVFGKPQVSMFEM 92
Query: 240 NKLLAKHI 247
L+ KH+
Sbjct: 93 AGLIGKHV 100
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Query: 281 SEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISAL 340
S ALA +G+ + + E ++W YIK N+L+D N +I DAKL+E+ G +S
Sbjct: 33 SPALAAVVGSD--PLPRTEIISKLWAYIKANNLQDAANKRMINADAKLKEVFGKPQVSMF 90
Query: 341 GIQEMLAR 348
+ ++ +
Sbjct: 91 EMAGLIGK 98
>gi|197105527|ref|YP_002130904.1| SWIB-domain-containing protein implicated in chromatin remodeling
[Phenylobacterium zucineum HLK1]
gi|196478947|gb|ACG78475.1| SWIB-domain-containing protein implicated in chromatin remodeling
[Phenylobacterium zucineum HLK1]
Length = 86
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFE-TDCTDMFK 238
S EL AVVG + R E V ++W YI+KNNLQ+P NKR+II D L+ +F+ D MF+
Sbjct: 17 SSELAAVVGSGQLSRGETVSKIWDYIKKNNLQNPQNKREIIADAKLKPIFDGKDKVSMFE 76
Query: 239 MNKLLAKHI 247
MNK LAKH+
Sbjct: 77 MNKHLAKHL 85
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
Query: 281 SEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELL-GCESISA 339
S LA +G+G ++ + E ++W+YIK N+L++P N I+ DAKL+ + G + +S
Sbjct: 17 SSELAAVVGSG--QLSRGETVSKIWDYIKKNNLQNPQNKREIIADAKLKPIFDGKDKVSM 74
Query: 340 LGIQEMLAR 348
+ + LA+
Sbjct: 75 FEMNKHLAK 83
>gi|319763201|ref|YP_004127138.1| swib/mdm2 domain-containing protein [Alicycliphilus denitrificans
BC]
gi|330825395|ref|YP_004388698.1| SWIB/MDM2 domain-containing protein [Alicycliphilus denitrificans
K601]
gi|317117762|gb|ADV00251.1| SWIB/MDM2 domain-containing protein [Alicycliphilus denitrificans
BC]
gi|329310767|gb|AEB85182.1| SWIB/MDM2 domain-containing protein [Alicycliphilus denitrificans
K601]
Length = 93
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 49/84 (58%)
Query: 164 AKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDD 223
AK+R K SP L AVVG +PRTEI+ +LW YI+ NNLQD +NKR I D
Sbjct: 9 AKKRTPNAAFMKPLTPSPALAAVVGATPLPRTEIISKLWVYIKANNLQDAANKRMINADA 68
Query: 224 ALRVVFETDCTDMFKMNKLLAKHI 247
L+ VF MF+M L+ KH+
Sbjct: 69 KLKEVFGKPQVSMFEMAGLIGKHV 92
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 281 SEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISAL 340
S ALA +G + + E ++W YIK N+L+D N +I DAKL+E+ G +S
Sbjct: 25 SPALAAVVG--ATPLPRTEIISKLWVYIKANNLQDAANKRMINADAKLKEVFGKPQVSMF 82
Query: 341 GIQEMLAR 348
+ ++ +
Sbjct: 83 EMAGLIGK 90
>gi|365758273|gb|EHN00124.1| Uaf30p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 219
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 59/80 (73%), Gaps = 2/80 (2%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+S L ++G+P + RT++V+Q+WAYI++++LQ+P N+++I+CD+ L ++F TDMFK
Sbjct: 128 LSKSLANLLGEPRLTRTDVVRQVWAYIKEHDLQNPKNRKEILCDEKLELIF-GKRTDMFK 186
Query: 239 MNKLLAKHII-PLEPTKESS 257
M+K+L H+ P + T SS
Sbjct: 187 MHKILVNHMTDPSKTTDNSS 206
Score = 44.3 bits (103), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 278 VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLG 333
VI+S++LA LG + + + ++VW YIK + L++P N ILCD KL + G
Sbjct: 126 VILSKSLANLLGEP--RLTRTDVVRQVWAYIKEHDLQNPKNRKEILCDEKLELIFG 179
>gi|378725363|gb|EHY51822.1| hypothetical protein HMPREF1120_00049 [Exophiala dermatitidis
NIH/UT8656]
Length = 283
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 172 GLNKVCGVSPELQAVV-GQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFE 230
G +K +SP L A G+ M R EI K++WAYI+ N+LQDPS+KR I+CD +R +F
Sbjct: 202 GFHKPLILSPALSAFFDGETKMSRPEITKRMWAYIKANDLQDPSDKRYIVCDSKMREIFR 261
Query: 231 TDCTDMFKMNKLLAKHI 247
D MF M KL+++ +
Sbjct: 262 QDKVHMFTMTKLISQQM 278
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 278 VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESI 337
+I+S AL+ F G +M + E TKR+W YIK N L+DP + I+CD+K+RE+ + +
Sbjct: 207 LILSPALSAFFD-GETKMSRPEITKRMWAYIKANDLQDPSDKRYIVCDSKMREIFRQDKV 265
Query: 338 SALGIQEMLARNHF 351
+ +++++ +
Sbjct: 266 HMFTMTKLISQQMY 279
>gi|319779180|ref|YP_004130093.1| DNA topoisomerase III [Taylorella equigenitalis MCE9]
gi|397661420|ref|YP_006502120.1| hypothetical protein KUI_0426 [Taylorella equigenitalis ATCC 35865]
gi|317109204|gb|ADU91950.1| DNA topoisomerase III [Taylorella equigenitalis MCE9]
gi|394349599|gb|AFN35513.1| hypothetical protein KUI_0426 [Taylorella equigenitalis ATCC 35865]
gi|399114652|emb|CCG17447.1| conserved hypothetical protein [Taylorella equigenitalis 14/56]
Length = 97
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 47/68 (69%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
S EL AVVG +PRTE+ K++W YI+ +LQD +N+R I DD LR +F D +MF+M
Sbjct: 29 SKELAAVVGDKPLPRTEVTKKVWEYIKSKDLQDANNRRNINADDKLRPIFGKDQVNMFEM 88
Query: 240 NKLLAKHI 247
KL++ H+
Sbjct: 89 TKLISAHL 96
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%)
Query: 291 GGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLA 347
G + + + E TK+VWEYIK L+D N I D KLR + G + ++ + ++++
Sbjct: 37 GDKPLPRTEVTKKVWEYIKSKDLQDANNRRNINADDKLRPIFGKDQVNMFEMTKLIS 93
>gi|296137220|ref|YP_003644462.1| SWIB/MDM2 domain-containing protein [Thiomonas intermedia K12]
gi|410695094|ref|YP_003625716.1| conserved hypothetical protein [Thiomonas sp. 3As]
gi|294341519|emb|CAZ89936.1| conserved hypothetical protein [Thiomonas sp. 3As]
gi|295797342|gb|ADG32132.1| SWIB/MDM2 domain protein [Thiomonas intermedia K12]
Length = 99
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 47/68 (69%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
S L AVVG +PRTE+VK+LW YI+K+NLQD +NKR I D L+ +F D MF+M
Sbjct: 31 SAHLAAVVGTTPLPRTEVVKKLWEYIKKHNLQDAANKRMINADAKLKPIFGKDQVSMFEM 90
Query: 240 NKLLAKHI 247
KL++ H+
Sbjct: 91 TKLVSAHL 98
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 281 SEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISAL 340
S LA +GT + + E K++WEYIK ++L+D N +I DAKL+ + G + +S
Sbjct: 31 SAHLAAVVGTT--PLPRTEVVKKLWEYIKKHNLQDAANKRMINADAKLKPIFGKDQVSMF 88
Query: 341 GIQEMLA 347
+ ++++
Sbjct: 89 EMTKLVS 95
>gi|241948081|ref|XP_002416763.1| RNA polymerase I transcription factor subunit, putative [Candida
dubliniensis CD36]
gi|223640101|emb|CAX44347.1| RNA polymerase I transcription factor subunit, putative [Candida
dubliniensis CD36]
Length = 254
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 51/86 (59%)
Query: 163 GAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICD 222
KR N+ +SPEL V+G R ++VK LWAYI+ +NLQ+P +KR+I CD
Sbjct: 123 NTKRSAPNNAFNREMALSPELANVIGVDKCSRPQVVKLLWAYIKDHNLQNPQDKRQIECD 182
Query: 223 DALRVVFETDCTDMFKMNKLLAKHII 248
+ L+ +F+ F MNK+L+ HI
Sbjct: 183 EKLQKLFKKKSVGAFHMNKILSDHIF 208
Score = 37.7 bits (86), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 33/53 (62%)
Query: 299 EATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNHF 351
+ K +W YIK ++L++P + I CD KL++L +S+ A + ++L+ + F
Sbjct: 156 QVVKLLWAYIKDHNLQNPQDKRQIECDEKLQKLFKKKSVGAFHMNKILSDHIF 208
>gi|390597337|gb|EIN06737.1| SWIB-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 296
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 52/73 (71%)
Query: 175 KVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCT 234
K +S L AV+ + R ++VK++W YIR+NNLQ+P++KR+IICD+ L+ +F T
Sbjct: 218 KEYSLSEPLAAVLNVDKLSRPQVVKRMWEYIRENNLQNPNDKREIICDEKLQRIFNAPST 277
Query: 235 DMFKMNKLLAKHI 247
+MFKMNK L++ +
Sbjct: 278 NMFKMNKTLSQSV 290
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISA 339
+SE LA L ++ + + KR+WEYI+ N+L++P + I+CD KL+ + S +
Sbjct: 222 LSEPLAAVLNVD--KLSRPQVVKRMWEYIRENNLQNPNDKREIICDEKLQRIFNAPSTNM 279
Query: 340 LGIQEMLA 347
+ + L+
Sbjct: 280 FKMNKTLS 287
>gi|405966284|gb|EKC31589.1| Upstream activation factor subunit spp27 [Crassostrea gigas]
Length = 248
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 48/76 (63%)
Query: 177 CGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDM 236
C +SP L V+G M R+E+VK++WA I++ NLQDP NK+ ++CDD L VF+
Sbjct: 173 CSLSPALAEVMGTDQMARSEVVKKMWAIIKERNLQDPKNKQFLLCDDQLFNVFKKKRVKT 232
Query: 237 FKMNKLLAKHIIPLEP 252
F M K+L HI L+
Sbjct: 233 FGMMKILRNHIFDLQD 248
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISA 339
+S ALA+ +GT +M ++E K++W IK +L+DP N +LCD +L + + +
Sbjct: 175 LSPALAEVMGTD--QMARSEVVKKMWAIIKERNLQDPKNKQFLLCDDQLFNVFKKKRVKT 232
Query: 340 LGIQEMLARNHFL 352
G+ ++L RNH
Sbjct: 233 FGMMKIL-RNHIF 244
>gi|449017562|dbj|BAM80964.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 401
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 114/260 (43%), Gaps = 64/260 (24%)
Query: 153 AEVAKENPPVGAKRRGGP---GGLNKVCGVSPELQAVVG-QPAMPRTEIVKQLWAYIRKN 208
A+ ++EN A R P GL ++PEL AV G Q +PR I KQL AY+R++
Sbjct: 121 AKRSQENDDDTATYRESPLRFTGLMAPVMLAPELAAVCGGQDILPRPWIAKQLHAYVREH 180
Query: 209 NLQDPSNKRKIICDDALRVVF-ETDCTDMFKMNK-------------------------- 241
L+DPS + D AL +F + D F+MNK
Sbjct: 181 ELRDPSQGMRFRPDAALAKLFPDRDSVSFFEMNKLLEQHIRKESQCAPEEQARIQAWRQE 240
Query: 242 -----LLAKHIIPLEPTKESSKR-----------FKP---DAESTTEGMESG-PSS---- 277
L + IP + + + R F P ++ST + S PS+
Sbjct: 241 WEAKGLTQRRKIPAKRARVRAGRQHLKEKALGASFSPLSGGSQSTQDSHRSSTPSTGKRK 300
Query: 278 -------VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRE 330
+ +SEAL+ G G R + + E + +WEYIK L+DP + VI CDAKL+
Sbjct: 301 ASGLAQPLQVSEALSDICG-GARILSRCEVVRLLWEYIKKQQLQDPNDRKVIQCDAKLQR 359
Query: 331 LLGCES-ISALGIQEMLARN 349
+ E+ ++A G+ L ++
Sbjct: 360 VFDGETRVTAFGMNRFLGKH 379
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 4/114 (3%)
Query: 157 KENPPVGAKRRGGPGGLNKVCGVSPELQAVVGQPA-MPRTEIVKQLWAYIRKNNLQDPSN 215
+ + P KR+ GL + VS L + G + R E+V+ LW YI+K LQDP++
Sbjct: 290 RSSTPSTGKRKAS--GLAQPLQVSEALSDICGGARILSRCEVVRLLWEYIKKQQLQDPND 347
Query: 216 KRKIICDDALRVVFETDC-TDMFKMNKLLAKHIIPLEPTKESSKRFKPDAESTT 268
++ I CD L+ VF+ + F MN+ L KH+ PL+ E + + + +S +
Sbjct: 348 RKVIQCDAKLQRVFDGETRVTAFGMNRFLGKHLQPLQRNDEVGRGSQSELDSES 401
>gi|121594745|ref|YP_986641.1| SWIB/MDM2 domain-containing protein [Acidovorax sp. JS42]
gi|222110642|ref|YP_002552906.1| swib/mdm2 domain-containing protein [Acidovorax ebreus TPSY]
gi|120606825|gb|ABM42565.1| SWIB/MDM2 domain protein [Acidovorax sp. JS42]
gi|221730086|gb|ACM32906.1| SWIB/MDM2 domain protein [Acidovorax ebreus TPSY]
Length = 96
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 49/84 (58%)
Query: 164 AKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDD 223
AK+R K SP L AVVG +PRTEI+ +LW YI+ +NLQD SNKR I D
Sbjct: 12 AKKRTPNAAFMKPLTPSPALAAVVGATPLPRTEIISKLWVYIKAHNLQDASNKRMINADA 71
Query: 224 ALRVVFETDCTDMFKMNKLLAKHI 247
L+ VF MF+M L+ KH+
Sbjct: 72 KLKEVFGKPQVSMFEMAGLIGKHV 95
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 281 SEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISAL 340
S ALA +G + + E ++W YIK ++L+D N +I DAKL+E+ G +S
Sbjct: 28 SPALAAVVG--ATPLPRTEIISKLWVYIKAHNLQDASNKRMINADAKLKEVFGKPQVSMF 85
Query: 341 GIQEMLAR 348
+ ++ +
Sbjct: 86 EMAGLIGK 93
>gi|225436221|ref|XP_002270166.1| PREDICTED: upstream activation factor subunit spp27 [Vitis
vinifera]
gi|147798865|emb|CAN68050.1| hypothetical protein VITISV_015104 [Vitis vinifera]
gi|296090194|emb|CBI40013.3| unnamed protein product [Vitis vinifera]
Length = 128
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 171 GGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFE 230
GG+ K VSP L+ +G P R E VK++W +I+ NNLQ+P+NKR+I+CD+ L+ VFE
Sbjct: 47 GGITKPVPVSPALRKFLGVPEASRAEAVKKIWEHIKLNNLQNPTNKREILCDEKLKSVFE 106
Query: 231 -TDCTDMFKMNKLLAKHII 248
D ++ KLL+ H I
Sbjct: 107 GKDKVGFLEIGKLLSHHFI 125
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELL-GCESIS 338
+S AL KFLG E +AEA K++WE+IK+N+L++P N ILCD KL+ + G + +
Sbjct: 55 VSPALRKFLGV--PEASRAEAVKKIWEHIKLNNLQNPTNKREILCDEKLKSVFEGKDKVG 112
Query: 339 ALGIQEMLARNHFLR 353
L I ++L+ +HF++
Sbjct: 113 FLEIGKLLS-HHFIK 126
>gi|333917235|ref|YP_004490967.1| DNA topoisomerase III [Delftia sp. Cs1-4]
gi|333747435|gb|AEF92612.1| DNA topoisomerase III [Delftia sp. Cs1-4]
Length = 970
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 46/68 (67%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
S L AV+G+ + RTE+VK+LW Y++ NLQDP +KR I DD LR VF D +MF++
Sbjct: 902 SAALAAVIGEGTVARTEVVKKLWEYVKAQNLQDPKDKRVIRADDKLRPVFGKDSVNMFEL 961
Query: 240 NKLLAKHI 247
++ KH+
Sbjct: 962 AGIVGKHL 969
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 281 SEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISAL 340
S ALA +G G + + E K++WEY+K +L+DP + VI D KLR + G +S++
Sbjct: 902 SAALAAVIGEG--TVARTEVVKKLWEYVKAQNLQDPKDKRVIRADDKLRPVFGKDSVNMF 959
Query: 341 GIQEMLARN 349
+ ++ ++
Sbjct: 960 ELAGIVGKH 968
>gi|212536546|ref|XP_002148429.1| C2H2 finger domain protein, putative [Talaromyces marneffei ATCC
18224]
gi|210070828|gb|EEA24918.1| C2H2 finger domain protein, putative [Talaromyces marneffei ATCC
18224]
Length = 1128
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 52/74 (70%), Gaps = 1/74 (1%)
Query: 171 GGLNKVCGVSPELQAVV-GQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF 229
GG +K +SP L ++ G+ A+ R + VK++W YI+ N+LQDPS++R+I CDD +R+VF
Sbjct: 197 GGFHKPLNLSPALSELLDGEVALSRPQTVKRVWEYIKANDLQDPSDRRQIRCDDRMRLVF 256
Query: 230 ETDCTDMFKMNKLL 243
+ D MF M K+L
Sbjct: 257 KQDRVHMFTMTKIL 270
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 14/103 (13%)
Query: 263 DAESTTEGMESGPSS------VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDP 316
D EST+E + S + +S AL++ L G + + + KRVWEYIK N L+DP
Sbjct: 182 DLESTSEAKKEVNRSGGFHKPLNLSPALSELLD-GEVALSRPQTVKRVWEYIKANDLQDP 240
Query: 317 LNSMVILCDAKLRELLGCESISALGIQEMLARN-------HFL 352
+ I CD ++R + + + + ++L N HFL
Sbjct: 241 SDRRQIRCDDRMRLVFKQDRVHMFTMTKILNLNLYDPGEHHFL 283
>gi|449432287|ref|XP_004133931.1| PREDICTED: uncharacterized protein LOC101218027 [Cucumis sativus]
Length = 157
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 68/135 (50%), Gaps = 12/135 (8%)
Query: 126 PQPSQAAAPPPQPHS-NVSKAEAFPQ----------ISAEVAKENPPVGAKRRGGPGGLN 174
P S A P P S SK E P+ ++A VA P K P G+
Sbjct: 21 PSKSSATVPATAPKSKTTSKLEPKPKLPKVKTPPSSVAAGVAATPEPKIKKEMSRPSGIL 80
Query: 175 KVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFE-TDC 233
KV VSP L +G R++ V Q+W+YI+ +NLQ+P NKR+I CDD L+ +FE +
Sbjct: 81 KVTQVSPALSNFLGVSEASRSDAVTQIWSYIKLHNLQNPDNKREIYCDDKLKAIFEGREK 140
Query: 234 TDMFKMNKLLAKHII 248
++ K LA+H +
Sbjct: 141 VGFLEIGKSLARHFV 155
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 8/87 (9%)
Query: 273 SGPSSVI----ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKL 328
S PS ++ +S AL+ FLG E +++A ++W YIK+++L++P N I CD KL
Sbjct: 74 SRPSGILKVTQVSPALSNFLGVS--EASRSDAVTQIWSYIKLHNLQNPDNKREIYCDDKL 131
Query: 329 RELL-GCESISALGIQEMLARNHFLRQ 354
+ + G E + L I + LAR HF++
Sbjct: 132 KAIFEGREKVGFLEIGKSLAR-HFVKN 157
>gi|347820345|ref|ZP_08873779.1| SWIB/MDM2 domain-containing protein [Verminephrobacter
aporrectodeae subsp. tuberculatae At4]
Length = 99
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 44/68 (64%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
SP L AVVG +PRTEIV +LW YIR NNLQD +NKR I D L+ +F MF++
Sbjct: 31 SPALAAVVGSAPLPRTEIVSKLWVYIRANNLQDAANKRNINADAKLKELFGKPQVSMFEL 90
Query: 240 NKLLAKHI 247
L+ KH+
Sbjct: 91 AGLIGKHV 98
Score = 41.2 bits (95), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 281 SEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISAL 340
S ALA +G+ + + E ++W YI+ N+L+D N I DAKL+EL G +S
Sbjct: 31 SPALAAVVGSA--PLPRTEIVSKLWVYIRANNLQDAANKRNINADAKLKELFGKPQVSMF 88
Query: 341 GIQEMLAR 348
+ ++ +
Sbjct: 89 ELAGLIGK 96
>gi|297836126|ref|XP_002885945.1| SWIB complex BAF60b domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331785|gb|EFH62204.1| SWIB complex BAF60b domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 141
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 62/99 (62%), Gaps = 3/99 (3%)
Query: 151 ISAEVAKENPPVGAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNL 210
+++ A P KR P G+ K VSPE+Q +V P + RT+ +K++WAYI++++L
Sbjct: 45 VTSATASSEPTATNKR--VPRGIMKPRPVSPEMQDIVELPEIARTQALKRIWAYIKEHDL 102
Query: 211 QDPSNKRKIICDDALRVVFE-TDCTDMFKMNKLLAKHII 248
QDP NKR+I+CD+ L+ +FE D ++ KL+ H +
Sbjct: 103 QDPQNKREILCDEKLKKIFEGRDRVGFLEIAKLIGPHFL 141
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 294 EMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELL-GCESISALGIQEMLARNHFL 352
E+ + +A KR+W YIK + L+DP N ILCD KL+++ G + + L I +++ HFL
Sbjct: 83 EIARTQALKRIWAYIKEHDLQDPQNKREILCDEKLKKIFEGRDRVGFLEIAKLIG-PHFL 141
>gi|225713048|gb|ACO12370.1| YMR233W [Lepeophtheirus salmonis]
Length = 243
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 52/91 (57%), Gaps = 4/91 (4%)
Query: 161 PVGAKRR----GGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
P AKR+ GG G K +S +L +VG+ PR E+VKQ+WAYI++N LQDP NK
Sbjct: 152 PTKAKRKSKGGGGNTGFTKPLNLSADLAIIVGKDMAPRHEVVKQVWAYIKENKLQDPKNK 211
Query: 217 RKIICDDALRVVFETDCTDMFKMNKLLAKHI 247
+ ICD+ L+ V F M K L H+
Sbjct: 212 QFAICDEKLKKVIGETKFKCFGMAKYLKSHM 242
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 292 GREML-QAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEML 346
G++M + E K+VW YIK N L+DP N +CD KL++++G G+ + L
Sbjct: 183 GKDMAPRHEVVKQVWAYIKENKLQDPKNKQFAICDEKLKKVIGETKFKCFGMAKYL 238
>gi|357114653|ref|XP_003559112.1| PREDICTED: upstream activation factor subunit UAF30-like
[Brachypodium distachyon]
Length = 138
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFE-TDCTDMF 237
VSP LQAVVG +PRTE +K+LWAYI++NNLQDP +K+ I+CD L+ +F +
Sbjct: 65 VSPALQAVVGASEVPRTEAIKRLWAYIKQNNLQDPMDKKVIVCDQKLKALFAGRERVGFL 124
Query: 238 KMNKLLAKHII 248
++ KLL H +
Sbjct: 125 EIAKLLNPHFV 135
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
Query: 290 TGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELL-GCESISALGIQEMLAR 348
G E+ + EA KR+W YIK N+L+DP++ VI+CD KL+ L G E + L I ++L
Sbjct: 73 VGASEVPRTEAIKRLWAYIKQNNLQDPMDKKVIVCDQKLKALFAGRERVGFLEIAKLL-N 131
Query: 349 NHFLR 353
HF++
Sbjct: 132 PHFVK 136
>gi|440536987|emb|CCP62501.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L1/440/LN]
gi|440537876|emb|CCP63390.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L1/1322/p2]
gi|440538766|emb|CCP64280.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L1/115]
gi|440539655|emb|CCP65169.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L1/224]
gi|440541435|emb|CCP66949.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L3/404/LN]
Length = 86
Score = 76.3 bits (186), Expect = 2e-11, Method: Composition-based stats.
Identities = 39/71 (54%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETD-CTDMF 237
VS +L A+VG MPRTEI+K++W YI++N LQDP+NKR I DD L VF T+ DMF
Sbjct: 15 VSADLAAIVGAGPMPRTEIIKKMWDYIKENGLQDPTNKRNINPDDKLAKVFGTEKPIDMF 74
Query: 238 KMNKLLAKHII 248
+M K++++HII
Sbjct: 75 QMTKMVSQHII 85
Score = 38.9 bits (89), Expect = 3.8, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 278 VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCE 335
V +S LA +G G M + E K++W+YIK N L+DP N I D KL ++ G E
Sbjct: 13 VNVSADLAAIVGAG--PMPRTEIIKKMWDYIKENGLQDPTNKRNINPDDKLAKVFGTE 68
>gi|15618487|ref|NP_224773.1| SWIB (YM74) complex protein [Chlamydophila pneumoniae CWL029]
gi|15836109|ref|NP_300633.1| SWIB (YM74) complex protein [Chlamydophila pneumoniae J138]
gi|16752461|ref|NP_444723.1| hypothetical protein CP0171 [Chlamydophila pneumoniae AR39]
gi|33241932|ref|NP_876873.1| hypothetical protein CpB0601 [Chlamydophila pneumoniae TW-183]
gi|384449161|ref|YP_005661763.1| SWIB/MDM2 domain-containing protein [Chlamydophila pneumoniae
LPCoLN]
gi|4376870|gb|AAD18716.1| SWIB (YM74) complex protein [Chlamydophila pneumoniae CWL029]
gi|7189103|gb|AAF38047.1| conserved hypothetical protein [Chlamydophila pneumoniae AR39]
gi|8978949|dbj|BAA98784.1| SWIB (YM74) complex protein [Chlamydophila pneumoniae J138]
gi|33236442|gb|AAP98530.1| hypothetical protein CpB0601 [Chlamydophila pneumoniae TW-183]
gi|269303455|gb|ACZ33555.1| SWIB/MDM2 domain protein [Chlamydophila pneumoniae LPCoLN]
Length = 87
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Query: 177 CGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF-ETDCTD 235
+S +L +VG+ MPRTEIVK++W YI+K+N QD NKR I+ D L VF +D D
Sbjct: 14 VNISTDLAVIVGKGPMPRTEIVKKVWEYIKKHNCQDQKNKRNILPDANLAKVFGSSDPID 73
Query: 236 MFKMNKLLAKHII 248
MF+M K L+KHI+
Sbjct: 74 MFQMTKALSKHIV 86
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 278 VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLG 333
V IS LA +G G M + E K+VWEYIK ++ +D N IL DA L ++ G
Sbjct: 14 VNISTDLAVIVGKG--PMPRTEIVKKVWEYIKKHNCQDQKNKRNILPDANLAKVFG 67
>gi|353236721|emb|CCA68710.1| probable UAF30-subunit of RNA polymerase I transcription factor
[Piriformospora indica DSM 11827]
Length = 295
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 50/80 (62%)
Query: 168 GGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRV 227
G GG +K +S EL V+ + + R ++VK+LW YI+ + LQ P NKR I CD+ L+
Sbjct: 211 GAKGGFSKPMMLSTELAEVLDETTLSRPQVVKKLWDYIKYHQLQKPENKRVIRCDEKLQK 270
Query: 228 VFETDCTDMFKMNKLLAKHI 247
VF DMF+MNK L+ H+
Sbjct: 271 VFRVPEIDMFQMNKALSNHL 290
Score = 41.2 bits (95), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Query: 264 AESTTEGMESGPSS-VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVI 322
A+ G + G S +++S LA+ L + + + K++W+YIK + L+ P N VI
Sbjct: 205 ADGEGAGAKGGFSKPMMLSTELAEVLDETT--LSRPQVVKKLWDYIKYHQLQKPENKRVI 262
Query: 323 LCDAKLRELLGCESISALGIQEMLARNHF 351
CD KL+++ I + + L+ NH
Sbjct: 263 RCDEKLQKVFRVPEIDMFQMNKALS-NHL 290
>gi|301632263|ref|XP_002945210.1| PREDICTED: DNA topoisomerase 3-like [Xenopus (Silurana) tropicalis]
Length = 873
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 45/68 (66%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
S L AV+G A+ RTE VK+LW YI+ + LQDP +KR I DD LR VF D MF++
Sbjct: 805 SAALAAVIGSAAVVRTEAVKKLWDYIKTHKLQDPKDKRTIRADDKLRAVFGKDSAGMFEL 864
Query: 240 NKLLAKHI 247
+ LL+ H+
Sbjct: 865 SGLLSAHL 872
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 281 SEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISAL 340
S ALA +G+ +++ EA K++W+YIK + L+DP + I D KLR + G +S
Sbjct: 805 SAALAAVIGSAA--VVRTEAVKKLWDYIKTHKLQDPKDKRTIRADDKLRAVFGKDSAGMF 862
Query: 341 GIQEMLA 347
+ +L+
Sbjct: 863 ELSGLLS 869
>gi|403412492|emb|CCL99192.1| predicted protein [Fibroporia radiculosa]
Length = 333
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 49/74 (66%)
Query: 172 GLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFET 231
G K +S L AV+ + R ++VKQLW YI+ N LQ+P+ K++I+CDD L+ +F
Sbjct: 260 GFQKEYALSEPLVAVLNVEKLSRPQVVKQLWDYIKGNGLQNPAAKKEILCDDKLKALFNV 319
Query: 232 DCTDMFKMNKLLAK 245
D DMF+MNK+L +
Sbjct: 320 DRIDMFRMNKVLGQ 333
Score = 41.6 bits (96), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 299 EATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLAR 348
+ K++W+YIK N L++P ILCD KL+ L + I + ++L +
Sbjct: 284 QVVKQLWDYIKGNGLQNPAAKKEILCDDKLKALFNVDRIDMFRMNKVLGQ 333
>gi|62184807|ref|YP_219592.1| hypothetical protein CAB162 [Chlamydophila abortus S26/3]
gi|329942483|ref|ZP_08291293.1| SWIB/MDM2 domain protein [Chlamydophila psittaci Cal10]
gi|332287120|ref|YP_004422021.1| SWIB/MDM2 domain-containing protein [Chlamydophila psittaci 6BC]
gi|384450266|ref|YP_005662866.1| hypothetical protein G5O_0190 [Chlamydophila psittaci 6BC]
gi|384451271|ref|YP_005663869.1| SWIB/MDM2 domain-containing protein [Chlamydophila psittaci 01DC11]
gi|384452247|ref|YP_005664844.1| SWIB/MDM2 domain-containing protein [Chlamydophila psittaci 08DC60]
gi|384453221|ref|YP_005665817.1| SWIB/MDM2 domain-containing protein [Chlamydophila psittaci C19/98]
gi|384454199|ref|YP_005666794.1| SWIB/MDM2 domain-containing protein [Chlamydophila psittaci 02DC15]
gi|392376373|ref|YP_004064151.1| conserved hypothetical protein [Chlamydophila psittaci RD1]
gi|406591985|ref|YP_006739165.1| SWIB/MDM2 domain-containing protein [Chlamydia psittaci CP3]
gi|406593096|ref|YP_006740275.1| SWIB/MDM2 domain-containing protein [Chlamydia psittaci NJ1]
gi|406594712|ref|YP_006741317.1| SWIB/MDM2 domain-containing protein [Chlamydia psittaci MN]
gi|407453655|ref|YP_006732763.1| SWIB/MDM2 domain-containing protein [Chlamydia psittaci 84/55]
gi|407454987|ref|YP_006733878.1| SWIB/MDM2 domain-containing protein [Chlamydia psittaci GR9]
gi|407456356|ref|YP_006734929.1| SWIB/MDM2 domain-containing protein [Chlamydia psittaci VS225]
gi|407457720|ref|YP_006736025.1| SWIB/MDM2 domain-containing protein [Chlamydia psittaci WS/RT/E30]
gi|407458967|ref|YP_006737070.1| SWIB/MDM2 domain-containing protein [Chlamydia psittaci M56]
gi|407460337|ref|YP_006738112.1| SWIB/MDM2 domain-containing protein [Chlamydia psittaci WC]
gi|410858150|ref|YP_006974090.1| conserved hypothetical protein [Chlamydia psittaci 01DC12]
gi|449070814|ref|YP_007437894.1| hypothetical protein AO9_00885 [Chlamydophila psittaci Mat116]
gi|62147874|emb|CAH63620.1| conserved hypothetical protein [Chlamydophila abortus S26/3]
gi|313847716|emb|CBY16706.1| conserved hypothetical protein [Chlamydophila psittaci RD1]
gi|325507161|gb|ADZ18799.1| SWIB/MDM2 domain protein [Chlamydophila psittaci 6BC]
gi|328815393|gb|EGF85381.1| SWIB/MDM2 domain protein [Chlamydophila psittaci Cal10]
gi|328914360|gb|AEB55193.1| BAF60b domain protein [Chlamydophila psittaci 6BC]
gi|334692002|gb|AEG85221.1| SWIB/MDM2 domain protein [Chlamydophila psittaci C19/98]
gi|334692981|gb|AEG86199.1| SWIB/MDM2 domain protein [Chlamydophila psittaci 01DC11]
gi|334693956|gb|AEG87173.1| SWIB/MDM2 domain protein [Chlamydophila psittaci 02DC15]
gi|334694936|gb|AEG88152.1| SWIB/MDM2 domain protein [Chlamydophila psittaci 08DC60]
gi|405780414|gb|AFS19164.1| SWIB/MDM2 domain protein [Chlamydia psittaci 84/55]
gi|405781530|gb|AFS20279.1| SWIB/MDM2 domain protein [Chlamydia psittaci GR9]
gi|405783144|gb|AFS21892.1| SWIB/MDM2 domain protein [Chlamydia psittaci MN]
gi|405783617|gb|AFS22364.1| SWIB/MDM2 domain protein [Chlamydia psittaci VS225]
gi|405785392|gb|AFS24138.1| SWIB/MDM2 domain protein [Chlamydia psittaci WS/RT/E30]
gi|405785615|gb|AFS24360.1| SWIB/MDM2 domain protein [Chlamydia psittaci M56]
gi|405787199|gb|AFS25943.1| SWIB/MDM2 domain protein [Chlamydia psittaci WC]
gi|405787857|gb|AFS26600.1| SWIB/MDM2 domain protein [Chlamydia psittaci CP3]
gi|405788968|gb|AFS27710.1| SWIB/MDM2 domain protein [Chlamydia psittaci NJ1]
gi|410811045|emb|CCO01688.1| conserved hypothetical protein [Chlamydia psittaci 01DC12]
gi|449039322|gb|AGE74746.1| hypothetical protein AO9_00885 [Chlamydophila psittaci Mat116]
Length = 87
Score = 75.9 bits (185), Expect = 3e-11, Method: Composition-based stats.
Identities = 38/71 (53%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFET-DCTDMF 237
++ +L A+VG+ MPRTEIVK++W YI+K NLQDP NKR I+ D+AL VF + + DMF
Sbjct: 16 ITSDLAAIVGKGPMPRTEIVKKVWDYIKKRNLQDPKNKRNILPDEALAKVFGSKNPIDMF 75
Query: 238 KMNKLLAKHII 248
+M K L+ HI+
Sbjct: 76 QMTKALSSHIV 86
Score = 38.1 bits (87), Expect = 6.8, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 278 VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCES 336
V I+ LA +G G M + E K+VW+YIK +L+DP N IL D L ++ G ++
Sbjct: 14 VNITSDLAAIVGKG--PMPRTEIVKKVWDYIKKRNLQDPKNKRNILPDEALAKVFGSKN 70
>gi|323352202|gb|EGA84739.1| Uaf30p [Saccharomyces cerevisiae VL3]
gi|365762956|gb|EHN04488.1| Uaf30p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 211
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 57/76 (75%), Gaps = 3/76 (3%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+S L +++G+ + RTE+V++LWAYI+ +NLQ+P+NK++I+CD+ L ++ T+MF+
Sbjct: 109 LSKSLASLLGEHELTRTEVVRRLWAYIKAHNLQNPNNKKEILCDEKLELIL-GKSTNMFE 167
Query: 239 MNKLLAKHIIPLEPTK 254
M+K+LA H+ EP K
Sbjct: 168 MHKILASHMT--EPKK 181
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 66/130 (50%), Gaps = 14/130 (10%)
Query: 229 FETDCTDMFKMNKLLAKHIIP-LEPTKESSKRFKPDAESTTEGMESGPSSV--------- 278
FE D+ K N LA + + +K SS K D+E+ +E +V
Sbjct: 47 FERSLEDLLKENATLAIELTKEITVSKRSSGEEKNDSETKGTHVEKKKGTVSKSPISTRK 106
Query: 279 -IISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESI 337
+S++LA LG E+ + E +R+W YIK ++L++P N ILCD KL +LG +S
Sbjct: 107 VTLSKSLASLLGE--HELTRTEVVRRLWAYIKAHNLQNPNNKKEILCDEKLELILG-KST 163
Query: 338 SALGIQEMLA 347
+ + ++LA
Sbjct: 164 NMFEMHKILA 173
>gi|323307329|gb|EGA60609.1| Uaf30p [Saccharomyces cerevisiae FostersO]
Length = 294
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 57/76 (75%), Gaps = 3/76 (3%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+S L +++G+ + RTE+V++LWAYI+ +NLQ+P+NK++I+CD+ L ++ T+MF+
Sbjct: 126 LSKSLASLLGEHELTRTEVVRRLWAYIKAHNLQNPNNKKEILCDEKLELIL-GKSTNMFE 184
Query: 239 MNKLLAKHIIPLEPTK 254
M+K+LA H+ EP K
Sbjct: 185 MHKILASHMT--EPKK 198
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 65/130 (50%), Gaps = 14/130 (10%)
Query: 229 FETDCTDMFKMNKLLAKHIIP-LEPTKESSKRFKPDAESTTEGMESGPSSV--------- 278
FE D+ K N LA + + +K SS K D+ + +E +V
Sbjct: 64 FERSLEDLLKENATLAIELTKEITVSKRSSGEEKNDSXTKGTHVEKKKGTVSKSPISTRK 123
Query: 279 -IISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESI 337
+S++LA LG E+ + E +R+W YIK ++L++P N ILCD KL +LG +S
Sbjct: 124 VTLSKSLASLLGE--HELTRTEVVRRLWAYIKAHNLQNPNNKKEILCDEKLELILG-KST 180
Query: 338 SALGIQEMLA 347
+ + ++LA
Sbjct: 181 NMFEMHKILA 190
>gi|359796570|ref|ZP_09299167.1| SWIB/MDM2 domain-containing protein [Achromobacter arsenitoxydans
SY8]
gi|359365533|gb|EHK67233.1| SWIB/MDM2 domain-containing protein [Achromobacter arsenitoxydans
SY8]
Length = 92
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 46/68 (67%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
S EL AV+G A+PRTE+ K++W YI+K+NLQD SNKR I D L +F D MF++
Sbjct: 24 SAELAAVIGSEAVPRTEVTKKIWEYIKKHNLQDASNKRNINADAKLLPIFGKDQVTMFEL 83
Query: 240 NKLLAKHI 247
KL+ H+
Sbjct: 84 TKLVNAHL 91
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 33/56 (58%)
Query: 291 GGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEML 346
G + + E TK++WEYIK ++L+D N I DAKL + G + ++ + +++
Sbjct: 32 GSEAVPRTEVTKKIWEYIKKHNLQDASNKRNINADAKLLPIFGKDQVTMFELTKLV 87
>gi|323331595|gb|EGA73010.1| Uaf30p [Saccharomyces cerevisiae AWRI796]
Length = 211
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+S L +++G+ + RTE+V++LWAYI+ +NLQ+P+NK++I+CD+ L ++ T+MF+
Sbjct: 109 LSKSLASLLGEHELTRTEVVRRLWAYIKAHNLQNPNNKKEILCDEKLELIL-GKSTNMFE 167
Query: 239 MNKLLAKHI 247
M+K+LA H+
Sbjct: 168 MHKILASHM 176
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 66/130 (50%), Gaps = 14/130 (10%)
Query: 229 FETDCTDMFKMNKLLAKHIIP-LEPTKESSKRFKPDAESTTEGMESGPSSV--------- 278
FE D+ K N LA + + +K SS K D+E+ +E +V
Sbjct: 47 FERSLEDLLKENATLAIELTKEITVSKRSSGEEKNDSETKGTHVEKKKGTVSKSPISTRK 106
Query: 279 -IISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESI 337
+S++LA LG E+ + E +R+W YIK ++L++P N ILCD KL +LG +S
Sbjct: 107 VTLSKSLASLLGE--HELTRTEVVRRLWAYIKAHNLQNPNNKKEILCDEKLELILG-KST 163
Query: 338 SALGIQEMLA 347
+ + ++LA
Sbjct: 164 NMFEMHKILA 173
>gi|389689629|ref|ZP_10178847.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Microvirga sp. WSM3557]
gi|388590119|gb|EIM30405.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Microvirga sp. WSM3557]
Length = 86
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDC-TDMFK 238
S EL AVVG +PRTE+V ++W YI+ NNLQ+P NKR+++ D+ L+ VF+ MF+
Sbjct: 17 SNELVAVVGSSPLPRTEVVSKVWDYIKSNNLQNPENKRELLADEKLQAVFDGKSKVSMFE 76
Query: 239 MNKLLAKHI 247
MNK A+H+
Sbjct: 77 MNKHFAQHL 85
>gi|388522755|gb|AFK49439.1| unknown [Lotus japonicus]
Length = 132
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 68/123 (55%), Gaps = 11/123 (8%)
Query: 127 QPSQAAAPPPQPHSNVSKAEAFPQISAEVAKENPPVGAKRRGGPGGLNKVCGVSPELQAV 186
QPS A PPP + P +++ + G K RG + K +SPE+Q++
Sbjct: 19 QPSFALPPPP------TLRMVRPVVTSATVSQPSAAGNKIRG----IMKPRKISPEMQSI 68
Query: 187 VGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFE-TDCTDMFKMNKLLAK 245
G P + RT+ +K +WAYI++NNLQDP NK+ I CD+ L+ VF D M ++ L++
Sbjct: 69 CGVPEISRTQALKHIWAYIKENNLQDPENKKLIRCDEKLKKVFAGKDEVGMLQIAGLISP 128
Query: 246 HII 248
H +
Sbjct: 129 HFL 131
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 291 GGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELL-GCESISALGIQEMLARN 349
G E+ + +A K +W YIK N+L+DP N +I CD KL+++ G + + L I +++
Sbjct: 70 GVPEISRTQALKHIWAYIKENNLQDPENKKLIRCDEKLKKVFAGKDEVGMLQIAGLIS-P 128
Query: 350 HFLR 353
HFL+
Sbjct: 129 HFLK 132
>gi|356496496|ref|XP_003517103.1| PREDICTED: upstream activation factor subunit UAF30-like [Glycine
max]
Length = 132
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 172 GLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFE- 230
G+ KV VS EL +G P + RTE VK++WAYI+ NLQ+P+NK++I CD+ L+ +FE
Sbjct: 52 GIQKVVPVSSELGDFLGAPQVSRTEAVKKVWAYIKLQNLQNPANKKEIFCDEKLKTIFEG 111
Query: 231 TDCTDMFKMNKLLAKHII 248
D ++ KLL+ H +
Sbjct: 112 KDKVGFTEIAKLLSNHFV 129
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Query: 273 SGPSSVI-ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLREL 331
SG V+ +S L FLG ++ + EA K+VW YIK+ +L++P N I CD KL+ +
Sbjct: 51 SGIQKVVPVSSELGDFLG--APQVSRTEAVKKVWAYIKLQNLQNPANKKEIFCDEKLKTI 108
Query: 332 LGCESISALGIQEM--LARNHFLR 353
E +G E+ L NHF++
Sbjct: 109 F--EGKDKVGFTEIAKLLSNHFVK 130
>gi|357480689|ref|XP_003610630.1| Upstream activation factor subunit UAF30 [Medicago truncatula]
gi|355511965|gb|AES93588.1| Upstream activation factor subunit UAF30 [Medicago truncatula]
gi|388522227|gb|AFK49175.1| unknown [Medicago truncatula]
Length = 143
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 62/99 (62%), Gaps = 5/99 (5%)
Query: 151 ISAEVAKENPPVGAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNL 210
+++ + PP G K RG + K +SPE+Q +VGQP + RT+ +K +WA+I+++NL
Sbjct: 48 VTSATVSQPPPTGGKIRG----IMKPKKISPEMQDLVGQPEISRTQALKSIWAHIKEHNL 103
Query: 211 QDPSNKRKIICDDALRVVFE-TDCTDMFKMNKLLAKHII 248
Q+P KR I CD+ L+ VF D DM ++ L++ H +
Sbjct: 104 QNPEKKRLIRCDEKLKKVFAGRDEVDMLEIAGLISPHFL 142
>gi|323302999|gb|EGA56803.1| Uaf30p [Saccharomyces cerevisiae FostersB]
Length = 228
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 57/76 (75%), Gaps = 3/76 (3%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+S L +++G+ + RTE+V++LWAYI+ +NLQ+P+NK++I+CD+ L ++ T+MF+
Sbjct: 126 LSKSLASLLGEHELTRTEVVRRLWAYIKAHNLQNPNNKKEILCDEKLELIL-GKSTNMFE 184
Query: 239 MNKLLAKHIIPLEPTK 254
M+K+LA H+ EP K
Sbjct: 185 MHKILASHMT--EPKK 198
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 65/130 (50%), Gaps = 14/130 (10%)
Query: 229 FETDCTDMFKMNKLLAKHIIP-LEPTKESSKRFKPDAESTTEGMESGPSSV--------- 278
FE D+ K N LA + + +K SS K D+ + +E +V
Sbjct: 64 FERSXEDLLKENATLAIELTKEITVSKRSSGEEKNDSXTKGTHVEKKKGTVSKSPISTRK 123
Query: 279 -IISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESI 337
+S++LA LG E+ + E +R+W YIK ++L++P N ILCD KL +LG +S
Sbjct: 124 VTLSKSLASLLGE--HELTRTEVVRRLWAYIKAHNLQNPNNKKEILCDEKLELILG-KST 180
Query: 338 SALGIQEMLA 347
+ + ++LA
Sbjct: 181 NMFEMHKILA 190
>gi|398366129|ref|NP_014938.3| Uaf30p [Saccharomyces cerevisiae S288c]
gi|74645010|sp|Q08747.1|UAF30_YEAST RecName: Full=Upstream activation factor subunit UAF30; AltName:
Full=Upstream activation factor 30 KDa subunit;
Short=p30
gi|1420654|emb|CAA99523.1| unnamed protein product [Saccharomyces cerevisiae]
gi|190407596|gb|EDV10863.1| hypothetical protein SCRG_01676 [Saccharomyces cerevisiae RM11-1a]
gi|256272579|gb|EEU07558.1| Uaf30p [Saccharomyces cerevisiae JAY291]
gi|259149770|emb|CAY86574.1| Uaf30p [Saccharomyces cerevisiae EC1118]
gi|285815167|tpg|DAA11060.1| TPA: Uaf30p [Saccharomyces cerevisiae S288c]
gi|392296622|gb|EIW07724.1| Uaf30p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 228
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 57/76 (75%), Gaps = 3/76 (3%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+S L +++G+ + RTE+V++LWAYI+ +NLQ+P+NK++I+CD+ L ++ T+MF+
Sbjct: 126 LSKSLASLLGEHELTRTEVVRRLWAYIKAHNLQNPNNKKEILCDEKLELIL-GKSTNMFE 184
Query: 239 MNKLLAKHIIPLEPTK 254
M+K+LA H+ EP K
Sbjct: 185 MHKILASHMT--EPKK 198
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 66/130 (50%), Gaps = 14/130 (10%)
Query: 229 FETDCTDMFKMNKLLAKHIIP-LEPTKESSKRFKPDAESTTEGMESGPSSV--------- 278
FE D+ K N LA + + +K SS K D+E+ +E +V
Sbjct: 64 FERSLEDLLKENATLAIELTKEITVSKRSSGEEKNDSETKGTHVEKKKGTVSKSPISTRK 123
Query: 279 -IISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESI 337
+S++LA LG E+ + E +R+W YIK ++L++P N ILCD KL +LG +S
Sbjct: 124 VTLSKSLASLLGE--HELTRTEVVRRLWAYIKAHNLQNPNNKKEILCDEKLELILG-KST 180
Query: 338 SALGIQEMLA 347
+ + ++LA
Sbjct: 181 NMFEMHKILA 190
>gi|449438339|ref|XP_004136946.1| PREDICTED: upstream activation factor subunit UAF30-like [Cucumis
sativus]
Length = 140
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 170 PGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF 229
P G+ K +SPELQA+VG P + RT+ +K +WAYI++NNLQ PSNK+ I CD+ L+ +F
Sbjct: 61 PRGITKPRKISPELQALVGAPEISRTQALKVIWAYIKENNLQKPSNKKVIACDEKLKKIF 120
Query: 230 -ETDCTDMFKMNKLLAKHII 248
D ++ L++ H +
Sbjct: 121 GGKDEVGFLEIAGLISPHFL 140
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 290 TGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEM--LA 347
G E+ + +A K +W YIK N+L+ P N VI CD KL+++ G + +G E+ L
Sbjct: 78 VGAPEISRTQALKVIWAYIKENNLQKPSNKKVIACDEKLKKIFGGK--DEVGFLEIAGLI 135
Query: 348 RNHFL 352
HFL
Sbjct: 136 SPHFL 140
>gi|294658451|ref|XP_002770785.1| DEHA2F09856p [Debaryomyces hansenii CBS767]
gi|202953140|emb|CAR66310.1| DEHA2F09856p [Debaryomyces hansenii CBS767]
Length = 247
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 46/70 (65%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+S EL V+G R ++VKQLW YI+ NNLQ+P +KR+IICD L+ +F+ F+
Sbjct: 129 LSNELADVLGVEKCSRPQVVKQLWTYIKDNNLQNPDDKRQIICDTKLQALFKKKSVGAFE 188
Query: 239 MNKLLAKHII 248
MNK L+ HI
Sbjct: 189 MNKFLSHHIF 198
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISA 339
+S LA LG + + + K++W YIK N+L++P + I+CD KL+ L +S+ A
Sbjct: 129 LSNELADVLGV--EKCSRPQVVKQLWTYIKDNNLQNPDDKRQIICDTKLQALFKKKSVGA 186
Query: 340 LGIQEMLARNHF 351
+ + L+ + F
Sbjct: 187 FEMNKFLSHHIF 198
>gi|151945377|gb|EDN63620.1| upstream activation factor subunit [Saccharomyces cerevisiae
YJM789]
gi|349581446|dbj|GAA26604.1| K7_Uaf30p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 228
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 57/76 (75%), Gaps = 3/76 (3%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+S L +++G+ + RTE+V++LWAYI+ +NLQ+P+NK++I+CD+ L ++ T+MF+
Sbjct: 126 LSKSLASLLGEHELTRTEVVRRLWAYIKAHNLQNPNNKKEILCDEKLELIL-GKSTNMFE 184
Query: 239 MNKLLAKHIIPLEPTK 254
M+K+LA H+ EP K
Sbjct: 185 MHKILASHMT--EPKK 198
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 65/130 (50%), Gaps = 14/130 (10%)
Query: 229 FETDCTDMFKMNKLLAKHIIP-LEPTKESSKRFKPDAESTTEGMESGPSSV--------- 278
FE D+ K N LA + + K SS K D+E+ +E +V
Sbjct: 64 FERSLEDLLKENVTLAIELTKEITVNKRSSGEEKNDSETKGTRVEKKKGTVSKSPISTRK 123
Query: 279 -IISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESI 337
+S++LA LG E+ + E +R+W YIK ++L++P N ILCD KL +LG +S
Sbjct: 124 VTLSKSLASLLGE--HELTRTEVVRRLWAYIKAHNLQNPNNKKEILCDEKLELILG-KST 180
Query: 338 SALGIQEMLA 347
+ + ++LA
Sbjct: 181 NMFEMHKILA 190
>gi|187479362|ref|YP_787387.1| hypothetical protein BAV2891 [Bordetella avium 197N]
gi|115423949|emb|CAJ50501.1| conserved hypothetical protein [Bordetella avium 197N]
Length = 92
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 46/68 (67%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
S EL AV+G A+PRTE+ K++W YI+K+NLQD SNKR I D L +F D MF++
Sbjct: 24 SAELAAVIGSEAVPRTEVTKKIWDYIKKHNLQDASNKRNINADAKLLPIFGKDQVTMFEL 83
Query: 240 NKLLAKHI 247
KL+ H+
Sbjct: 84 TKLVNAHL 91
Score = 40.8 bits (94), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 33/56 (58%)
Query: 291 GGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEML 346
G + + E TK++W+YIK ++L+D N I DAKL + G + ++ + +++
Sbjct: 32 GSEAVPRTEVTKKIWDYIKKHNLQDASNKRNINADAKLLPIFGKDQVTMFELTKLV 87
>gi|401626231|gb|EJS44187.1| YMR233W [Saccharomyces arboricola H-6]
Length = 226
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 68/108 (62%), Gaps = 5/108 (4%)
Query: 172 GLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFET 231
+ KV +P LQA +G +PRT++VK +W YI++++LQ+PS++R+I+CD+ + +F
Sbjct: 120 SVRKVLLSAP-LQAFLGAEELPRTQVVKMIWQYIKEHDLQNPSDRREILCDEKMEPIFGK 178
Query: 232 DCTDMFKMNKLLAKHII-PLEPTK-ESSKRFKPDAESTTEGMESGPSS 277
T MF MNKLL KH+ P E K E K P E +E E+ P+S
Sbjct: 179 KMT-MFSMNKLLTKHLFNPDEIVKHEEEKEPMPKKEVKSED-EALPNS 224
Score = 44.7 bits (104), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 278 VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESI 337
V++S L FLG E+ + + K +W+YIK + L++P + ILCD K+ + G + +
Sbjct: 124 VLLSAPLQAFLG--AEELPRTQVVKMIWQYIKEHDLQNPSDRREILCDEKMEPIFG-KKM 180
Query: 338 SALGIQEMLARNHF 351
+ + ++L ++ F
Sbjct: 181 TMFSMNKLLTKHLF 194
>gi|325095860|gb|EGC49170.1| SWIB/MDM2 domain-containing protein [Ajellomyces capsulatus H88]
Length = 281
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Query: 171 GGLNKVCGVSPELQAVVG-QPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF 229
GG +K +S L ++G + + R + VK++W YIR+NNLQDP+++R+I CDD +R VF
Sbjct: 199 GGFHKPLALSAPLSVLLGGEVTLSRPQAVKKVWQYIRENNLQDPADRRQIRCDDLMRAVF 258
Query: 230 ETDCTDMFKMNKLLAKHIIPLE 251
+ D MF M K+L ++ L+
Sbjct: 259 KQDRIHMFTMTKILNHNLYNLD 280
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Query: 263 DAESTTEGMESGP--SSVIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSM 320
D+ES E +G + +S L+ LG G + + +A K+VW+YI+ N+L+DP +
Sbjct: 188 DSESKKEVTRTGGFHKPLALSAPLSVLLG-GEVTLSRPQAVKKVWQYIRENNLQDPADRR 246
Query: 321 VILCDAKLRELLGCESISALGIQEMLARNHF 351
I CD +R + + I + ++L N +
Sbjct: 247 QIRCDDLMRAVFKQDRIHMFTMTKILNHNLY 277
>gi|393718831|ref|ZP_10338758.1| SWIB/MDM2 domain-containing protein [Sphingomonas echinoides ATCC
14820]
Length = 93
Score = 75.1 bits (183), Expect = 5e-11, Method: Composition-based stats.
Identities = 36/77 (46%), Positives = 53/77 (68%)
Query: 171 GGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFE 230
GG+ S EL A+VG +PR+E++ ++WAYI+ +NLQ+P NKR+I+ D+ L+ VF
Sbjct: 15 GGIFAPITPSAELGAIVGTDKLPRSEVISKVWAYIKAHNLQNPENKREIVADEKLKKVFG 74
Query: 231 TDCTDMFKMNKLLAKHI 247
D MF+MNK LA H+
Sbjct: 75 KDKVTMFEMNKHLAGHM 91
Score = 38.1 bits (87), Expect = 5.8, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 35/57 (61%)
Query: 291 GGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLA 347
G ++ ++E +VW YIK ++L++P N I+ D KL+++ G + ++ + + LA
Sbjct: 32 GTDKLPRSEVISKVWAYIKAHNLQNPENKREIVADEKLKKVFGKDKVTMFEMNKHLA 88
>gi|452124017|ref|ZP_21936601.1| hypothetical protein F783_00025 [Bordetella holmesii F627]
gi|452127403|ref|ZP_21939984.1| hypothetical protein H558_00025 [Bordetella holmesii H558]
gi|451923247|gb|EMD73388.1| hypothetical protein F783_00025 [Bordetella holmesii F627]
gi|451926683|gb|EMD76813.1| hypothetical protein H558_00025 [Bordetella holmesii H558]
Length = 92
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 46/68 (67%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
S EL AV+G A+PRTE+ K++W YI+K+NLQD SNKR I D L +F D MF++
Sbjct: 24 SAELAAVIGSEAVPRTEVTKKIWDYIKKHNLQDASNKRNINADAKLLPIFGKDQVTMFEL 83
Query: 240 NKLLAKHI 247
KL+ H+
Sbjct: 84 TKLVNAHL 91
Score = 41.2 bits (95), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 33/56 (58%)
Query: 291 GGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEML 346
G + + E TK++W+YIK ++L+D N I DAKL + G + ++ + +++
Sbjct: 32 GSEAVPRTEVTKKIWDYIKKHNLQDASNKRNINADAKLLPIFGKDQVTMFELTKLV 87
>gi|356538435|ref|XP_003537709.1| PREDICTED: upstream activation factor subunit UAF30-like [Glycine
max]
Length = 132
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 172 GLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFE- 230
G+ KV VS EL +G P + RT+ VK++WAYI+ NLQ+P+NK++I CD+ L+ +FE
Sbjct: 52 GIQKVVPVSSELGDFLGAPQVSRTDAVKKVWAYIKLQNLQNPANKKEIFCDEKLKTIFEG 111
Query: 231 TDCTDMFKMNKLLAKHII 248
D ++ KLL+ H +
Sbjct: 112 KDKVGFTEIAKLLSSHFV 129
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Query: 273 SGPSSVI-ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLREL 331
SG V+ +S L FLG ++ + +A K+VW YIK+ +L++P N I CD KL+ +
Sbjct: 51 SGIQKVVPVSSELGDFLGA--PQVSRTDAVKKVWAYIKLQNLQNPANKKEIFCDEKLKTI 108
Query: 332 LGCESISALGIQEM--LARNHFLR 353
E +G E+ L +HF++
Sbjct: 109 F--EGKDKVGFTEIAKLLSSHFVK 130
>gi|392591388|gb|EIW80716.1| SWIB-domain-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 392
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 43/65 (66%)
Query: 183 LQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKL 242
L +V P M R ++V +LW YI+ + LQ+ SN+R+I+CD +R VF D DMF MNK
Sbjct: 324 LSILVAAPKMSRPQVVSKLWEYIKAHELQNASNRREILCDATMRAVFACDKIDMFTMNKK 383
Query: 243 LAKHI 247
L +H+
Sbjct: 384 LGQHL 388
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 32/56 (57%)
Query: 294 EMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARN 349
+M + + ++WEYIK + L++ N ILCDA +R + C+ I + + L ++
Sbjct: 332 KMSRPQVVSKLWEYIKAHELQNASNRREILCDATMRAVFACDKIDMFTMNKKLGQH 387
>gi|389873151|ref|YP_006380570.1| hypothetical protein TKWG_18775 [Advenella kashmirensis WT001]
gi|388538400|gb|AFK63588.1| hypothetical protein TKWG_18775 [Advenella kashmirensis WT001]
Length = 91
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 46/68 (67%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
S EL V+G +PRTE+ K++W YI+K++LQDP N+R I D LR +F D MF+M
Sbjct: 23 SAELAQVIGSDPLPRTEVTKKIWEYIKKHDLQDPKNRRNINADAKLRPIFGKDQVSMFEM 82
Query: 240 NKLLAKHI 247
KL++ H+
Sbjct: 83 TKLVSTHL 90
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 281 SEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISAL 340
S LA+ +G+ + + E TK++WEYIK + L+DP N I DAKLR + G + +S
Sbjct: 23 SAELAQVIGSD--PLPRTEVTKKIWEYIKKHDLQDPKNRRNINADAKLRPIFGKDQVSMF 80
Query: 341 GIQEMLA 347
+ ++++
Sbjct: 81 EMTKLVS 87
>gi|18397658|ref|NP_565366.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]
gi|13926219|gb|AAK49586.1|AF370580_1 Unknown protein [Arabidopsis thaliana]
gi|3650030|gb|AAC61285.1| expressed protein [Arabidopsis thaliana]
gi|330251251|gb|AEC06345.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]
Length = 141
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 60/94 (63%), Gaps = 1/94 (1%)
Query: 156 AKENPPVGAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSN 215
A E+ A + P G+ K VSPE+Q +V P + RT+ +K++WAYI++++LQDP N
Sbjct: 48 ATESSEPTATNKRVPRGIMKPRPVSPEMQDIVELPEIARTQALKRIWAYIKEHDLQDPQN 107
Query: 216 KRKIICDDALRVVFE-TDCTDMFKMNKLLAKHII 248
KR+I+CD+ L+ +FE D ++ KL+ H +
Sbjct: 108 KREILCDEKLKKIFEGRDRVGFLEIAKLIGPHFL 141
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 294 EMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELL-GCESISALGIQEMLARNHFL 352
E+ + +A KR+W YIK + L+DP N ILCD KL+++ G + + L I +++ HFL
Sbjct: 83 EIARTQALKRIWAYIKEHDLQDPQNKREILCDEKLKKIFEGRDRVGFLEIAKLIG-PHFL 141
>gi|21593713|gb|AAM65680.1| unknown [Arabidopsis thaliana]
Length = 141
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 60/94 (63%), Gaps = 1/94 (1%)
Query: 156 AKENPPVGAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSN 215
A E+ A + P G+ K VSPE+Q +V P + RT+ +K++WAYI++++LQDP N
Sbjct: 48 ATESSEPTATNKRVPRGIMKPRPVSPEMQDIVELPEIARTQALKRIWAYIKEHDLQDPQN 107
Query: 216 KRKIICDDALRVVFE-TDCTDMFKMNKLLAKHII 248
KR+I+CD+ L+ +FE D ++ KL+ H +
Sbjct: 108 KREILCDEKLKKIFEGRDRVGFLEIAKLIGPHFL 141
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 294 EMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELL-GCESISALGIQEMLARNHFL 352
E+ + +A KR+W YIK + L+DP N ILCD KL+++ G + + L I +++ HFL
Sbjct: 83 EIARTQALKRIWAYIKEHDLQDPQNKREILCDEKLKKIFEGRDRVGFLEIAKLIG-PHFL 141
>gi|19698859|gb|AAL91165.1| unknown protein [Arabidopsis thaliana]
gi|24899679|gb|AAN65054.1| unknown protein [Arabidopsis thaliana]
Length = 141
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 60/94 (63%), Gaps = 1/94 (1%)
Query: 156 AKENPPVGAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSN 215
A E+ A + P G+ K VSPE+Q +V P + RT+ +K++WAYI++++LQDP N
Sbjct: 48 ATESSEPTATNKRVPRGIMKPRPVSPEMQDIVELPEIARTQALKRIWAYIKEHDLQDPQN 107
Query: 216 KRKIICDDALRVVFE-TDCTDMFKMNKLLAKHII 248
KR+I+CD+ L+ +FE D ++ KL+ H +
Sbjct: 108 KREILCDEKLKKIFEGRDRVGFLEIAKLIGPHFL 141
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 294 EMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELL-GCESISALGIQEMLARNHFL 352
E+ + +A KR+W YIK + L+DP N ILCD KL+++ G + + L I +++ HFL
Sbjct: 83 EIARTQALKRIWAYIKEHDLQDPQNKREILCDEKLKKIFEGRDRVGFLEIAKLIG-PHFL 141
>gi|207340922|gb|EDZ69123.1| YOR295Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 228
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 57/76 (75%), Gaps = 3/76 (3%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+S L +++G+ + RTE+V++LWAY++ +NLQ+P+NK++I+CD+ L ++ T+MF+
Sbjct: 126 LSKSLASLLGEHELTRTEVVRRLWAYVKAHNLQNPNNKKEILCDEKLELIL-GKSTNMFE 184
Query: 239 MNKLLAKHIIPLEPTK 254
M+K+LA H+ EP K
Sbjct: 185 MHKILASHMT--EPKK 198
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 66/130 (50%), Gaps = 14/130 (10%)
Query: 229 FETDCTDMFKMNKLLAKHIIP-LEPTKESSKRFKPDAESTTEGMESGPSSV--------- 278
FE D+ K N LA + + +K SS K D+E+ +E +V
Sbjct: 64 FERSLEDLLKENATLAIELTKEITVSKRSSGEEKNDSETKGTHVEKKKGTVSKSPISTRK 123
Query: 279 -IISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESI 337
+S++LA LG E+ + E +R+W Y+K ++L++P N ILCD KL +LG +S
Sbjct: 124 VTLSKSLASLLGE--HELTRTEVVRRLWAYVKAHNLQNPNNKKEILCDEKLELILG-KST 180
Query: 338 SALGIQEMLA 347
+ + ++LA
Sbjct: 181 NMFEMHKILA 190
>gi|319794595|ref|YP_004156235.1| swib/mdm2 domain-containing protein [Variovorax paradoxus EPS]
gi|315597058|gb|ADU38124.1| SWIB/MDM2 domain-containing protein [Variovorax paradoxus EPS]
Length = 148
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 44/68 (64%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
SP L AVVG +PRT +V +LW YI+KNNLQD +NKR I D L+ +F MF++
Sbjct: 80 SPALAAVVGSTPLPRTAVVSKLWDYIKKNNLQDKANKRNINADAKLKEIFGKSQVSMFEL 139
Query: 240 NKLLAKHI 247
L+ KH+
Sbjct: 140 AALIGKHV 147
Score = 41.6 bits (96), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%)
Query: 303 RVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLAR 348
++W+YIK N+L+D N I DAKL+E+ G +S + ++ +
Sbjct: 100 KLWDYIKKNNLQDKANKRNINADAKLKEIFGKSQVSMFELAALIGK 145
>gi|89900739|ref|YP_523210.1| SWIB/MDM2 [Rhodoferax ferrireducens T118]
gi|89345476|gb|ABD69679.1| SWIB/MDM2 [Rhodoferax ferrireducens T118]
Length = 144
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 43/68 (63%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
S L AVVG +PRTE+VKQLW YI+KN LQD NKR I D L+ VF MF+M
Sbjct: 76 SAALAAVVGVGPLPRTEVVKQLWTYIKKNKLQDAVNKRMINADAKLKEVFGKVQVSMFEM 135
Query: 240 NKLLAKHI 247
L+ KH+
Sbjct: 136 AGLIGKHL 143
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 281 SEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISAL 340
S ALA +G G + + E K++W YIK N L+D +N +I DAKL+E+ G +S
Sbjct: 76 SAALAAVVGVG--PLPRTEVVKQLWTYIKKNKLQDAVNKRMINADAKLKEVFGKVQVSMF 133
Query: 341 GIQEMLAR 348
+ ++ +
Sbjct: 134 EMAGLIGK 141
>gi|156847606|ref|XP_001646687.1| hypothetical protein Kpol_1028p105 [Vanderwaltozyma polyspora DSM
70294]
gi|156117366|gb|EDO18829.1| hypothetical protein Kpol_1028p105 [Vanderwaltozyma polyspora DSM
70294]
Length = 261
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 58/81 (71%), Gaps = 2/81 (2%)
Query: 168 GGPGGLN-KVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALR 226
P +N + +SP+LQ +G+ +PRT++VK++W YI++++LQ+P ++R+I+CD+ ++
Sbjct: 118 ANPNSINVRKVLLSPKLQEFLGETELPRTQVVKKVWDYIKEHDLQNPDDRREILCDEKMQ 177
Query: 227 VVFETDCTDMFKMNKLLAKHI 247
+F T MF +NK+LA H+
Sbjct: 178 PIFGKKMT-MFSLNKILANHL 197
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 52/89 (58%), Gaps = 9/89 (10%)
Query: 272 ESGPSS-----VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDA 326
E+ P+S V++S L +FLG E+ + + K+VW+YIK + L++P + ILCD
Sbjct: 117 EANPNSINVRKVLLSPKLQEFLGET--ELPRTQVVKKVWDYIKEHDLQNPDDRREILCDE 174
Query: 327 KLRELLGCESISALGIQEMLARNHFLRQS 355
K++ + G + ++ + ++LA NH +
Sbjct: 175 KMQPIFG-KKMTMFSLNKILA-NHLFNKD 201
>gi|395763959|ref|ZP_10444628.1| hypothetical protein JPAM2_19696 [Janthinobacterium lividum PAMC
25724]
Length = 132
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDC-TDMFK 238
S EL AVVG +PRTE+ K++W YI+K +LQDP+N+R I DD L+ VF MF+
Sbjct: 63 SKELAAVVGAAPLPRTEVTKKVWDYIKKLDLQDPANRRMINADDKLKAVFSGKAQVSMFE 122
Query: 239 MNKLLAKHI 247
M KL++ H+
Sbjct: 123 MTKLISDHL 131
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 291 GGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELL-GCESISALGIQEMLA 347
G + + E TK+VW+YIK L+DP N +I D KL+ + G +S + ++++
Sbjct: 71 GAAPLPRTEVTKKVWDYIKKLDLQDPANRRMINADDKLKAVFSGKAQVSMFEMTKLIS 128
>gi|238879408|gb|EEQ43046.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 172
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 49/78 (62%)
Query: 171 GGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFE 230
N+ +SPEL V+G R ++VK LWAYI+ +NLQ+P +KR+I CD+ L+ +F+
Sbjct: 51 NAFNREMALSPELTNVIGVDKCSRPQVVKLLWAYIKDHNLQNPQDKRQIECDEKLQKLFK 110
Query: 231 TDCTDMFKMNKLLAKHII 248
F MNK+L+ HI
Sbjct: 111 KKNVGAFHMNKILSDHIF 128
>gi|427786519|gb|JAA58711.1| Putative rna polymerase i transcription factor uaf [Rhipicephalus
pulchellus]
Length = 221
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 50/85 (58%), Gaps = 3/85 (3%)
Query: 163 GAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICD 222
GAKR ++ C +SPEL AVVG M R+ +VK++W+ +R+ NL DPSNK+ +CD
Sbjct: 136 GAKR---ESAYSRKCALSPELAAVVGAEEMARSAVVKKMWSIVRERNLFDPSNKQFALCD 192
Query: 223 DALRVVFETDCTDMFKMNKLLAKHI 247
L VF MF M K L HI
Sbjct: 193 PQLMKVFGHKRVRMFGMMKYLKNHI 217
Score = 42.0 bits (97), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 290 TGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARN 349
G EM ++ K++W ++ +L DP N LCD +L ++ G + + G+ + L +N
Sbjct: 157 VGAEEMARSAVVKKMWSIVRERNLFDPSNKQFALCDPQLMKVFGHKRVRMFGMMKYL-KN 215
Query: 350 HF 351
H
Sbjct: 216 HI 217
>gi|444318920|ref|XP_004180117.1| hypothetical protein TBLA_0D00900 [Tetrapisispora blattae CBS 6284]
gi|387513159|emb|CCH60598.1| hypothetical protein TBLA_0D00900 [Tetrapisispora blattae CBS 6284]
Length = 274
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 57/98 (58%), Gaps = 5/98 (5%)
Query: 152 SAEVAKENPPVGAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQ 211
S +V+KE P K + K +S EL ++G+ +PR EI K+LW YI+ NNLQ
Sbjct: 96 SKKVSKETP----KAKVANNLSTKYVVLSKELSHLLGENELPRLEITKELWKYIKNNNLQ 151
Query: 212 DPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHIIP 249
DP+NK++II D L+ +F D M + K+L HII
Sbjct: 152 DPANKQRIISDKMLKPIF-GDNFHMLDIGKVLNNHIIS 188
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
Query: 278 VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESI 337
V++S+ L+ LG E+ + E TK +W+YIK N+L+DP N I+ D L+ + G ++
Sbjct: 117 VVLSKELSHLLGEN--ELPRLEITKELWKYIKNNNLQDPANKQRIISDKMLKPIFG-DNF 173
Query: 338 SALGIQEMLARNHFLRQS 355
L I ++L NH + +
Sbjct: 174 HMLDIGKVL-NNHIISDT 190
>gi|294463650|gb|ADE77352.1| unknown [Picea sitchensis]
Length = 129
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 72/121 (59%), Gaps = 6/121 (4%)
Query: 129 SQAAAPPPQPHSNVSKAEAFPQISAEVAKENPPVGAKRRGGPGGLNKVCGVSPELQAVVG 188
+ AAA QP S +KA A ++A A E+ AK GL K +SP ++ +G
Sbjct: 11 AMAAAKAQQP-SRTAKAAAKGTVAAGAAAESTTKVAKH----SGLFKPLSISPVMKKFLG 65
Query: 189 QPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF-ETDCTDMFKMNKLLAKHI 247
+ R+E +K++W +I+ NNLQ+P+NK +I+CD+ L+ + + + +MF++ KL++ H
Sbjct: 66 VSEVARSEAIKKIWEHIKANNLQNPANKTEILCDEKLKAILGQKENVNMFEIAKLISPHF 125
Query: 248 I 248
I
Sbjct: 126 I 126
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 62/96 (64%), Gaps = 10/96 (10%)
Query: 264 AESTTE-GMESG---PSSVIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNS 319
AESTT+ SG P S IS + KFLG E+ ++EA K++WE+IK N+L++P N
Sbjct: 38 AESTTKVAKHSGLFKPLS--ISPVMKKFLGVS--EVARSEAIKKIWEHIKANNLQNPANK 93
Query: 320 MVILCDAKLRELLG-CESISALGIQEMLARNHFLRQ 354
ILCD KL+ +LG E+++ I ++++ HF+++
Sbjct: 94 TEILCDEKLKAILGQKENVNMFEIAKLIS-PHFIKK 128
>gi|359843278|gb|AEV89774.1| nuclear protein [Schistocerca gregaria]
Length = 267
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 46/75 (61%)
Query: 175 KVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCT 234
K +SPEL A++GQ +MPR E+VK++W I++ NL DP NK+ ICDD L VF
Sbjct: 193 KAKSLSPELAALMGQDSMPRHEVVKKIWGIIKERNLYDPKNKQFAICDDELMKVFGVKRF 252
Query: 235 DMFKMNKLLAKHIIP 249
MF M K L H +
Sbjct: 253 RMFGMMKYLKNHFVD 267
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 284 LAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQ 343
LA +G M + E K++W IK +L DP N +CD +L ++ G + G+
Sbjct: 201 LAALMGQDS--MPRHEVVKKIWGIIKERNLYDPKNKQFAICDDELMKVFGVKRFRMFGMM 258
Query: 344 EMLARNHFL 352
+ L +NHF+
Sbjct: 259 KYL-KNHFV 266
>gi|319764850|ref|YP_004128787.1| DNA topoisomerase iii [Alicycliphilus denitrificans BC]
gi|330827055|ref|YP_004390358.1| DNA topoisomerase III [Alicycliphilus denitrificans K601]
gi|317119411|gb|ADV01900.1| DNA topoisomerase III [Alicycliphilus denitrificans BC]
gi|329312427|gb|AEB86842.1| DNA topoisomerase III [Alicycliphilus denitrificans K601]
Length = 973
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 45/68 (66%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
S +L AV+G + R E VK++W YI+ +NLQDP +KR I+ DD LR VF D MF++
Sbjct: 905 SAQLAAVIGAEPVARPEAVKKMWDYIKAHNLQDPKDKRTIVADDKLRAVFGKDSIGMFEL 964
Query: 240 NKLLAKHI 247
+L +H+
Sbjct: 965 AGVLGRHL 972
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 33/51 (64%)
Query: 299 EATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARN 349
EA K++W+YIK ++L+DP + I+ D KLR + G +SI + +L R+
Sbjct: 921 EAVKKMWDYIKAHNLQDPKDKRTIVADDKLRAVFGKDSIGMFELAGVLGRH 971
>gi|407939544|ref|YP_006855185.1| swib/mdm2 domain-containing protein [Acidovorax sp. KKS102]
gi|407897338|gb|AFU46547.1| swib/mdm2 domain-containing protein [Acidovorax sp. KKS102]
Length = 106
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 44/68 (64%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
SP L AVVG +PRTEI+ +LW YI+ NNLQD +NKR I D L+ +F MF++
Sbjct: 38 SPALAAVVGSAPLPRTEIISKLWVYIKANNLQDATNKRNINADAKLKELFGKPQVSMFEL 97
Query: 240 NKLLAKHI 247
L+ KH+
Sbjct: 98 AGLIGKHV 105
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 281 SEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISAL 340
S ALA +G+ + + E ++W YIK N+L+D N I DAKL+EL G +S
Sbjct: 38 SPALAAVVGSA--PLPRTEIISKLWVYIKANNLQDATNKRNINADAKLKELFGKPQVSMF 95
Query: 341 GIQEMLAR 348
+ ++ +
Sbjct: 96 ELAGLIGK 103
>gi|21553903|gb|AAM62986.1| unknown [Arabidopsis thaliana]
Length = 144
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 71/129 (55%), Gaps = 5/129 (3%)
Query: 121 LNFSQPQPSQAAAPPPQPHSNVSKAEAFPQISAEVAKENPPVGAKRRGGPGGLNKVCGVS 180
L S PS P P +N+ A +++ A + P + P G+ K VS
Sbjct: 20 LRISMLSPSSLRLSPNHP-TNLRMVRA---VTSAAAASSDPTTTTKTREPRGIMKPRPVS 75
Query: 181 PELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFE-TDCTDMFKM 239
+Q VVG P +PRT+ +K++WAYI++++LQDP NKR I+CD+ L+ +FE + ++
Sbjct: 76 QAMQDVVGVPEIPRTQALKRIWAYIKEHDLQDPQNKRDILCDEKLKKIFEGKERVGFLEI 135
Query: 240 NKLLAKHII 248
KL+ H +
Sbjct: 136 AKLIGPHFL 144
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 4/74 (5%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELL-GCESIS 338
+S+A+ +G E+ + +A KR+W YIK + L+DP N ILCD KL+++ G E +
Sbjct: 74 VSQAMQDVVGVP--EIPRTQALKRIWAYIKEHDLQDPQNKRDILCDEKLKKIFEGKERVG 131
Query: 339 ALGIQEMLARNHFL 352
L I +++ HFL
Sbjct: 132 FLEIAKLIG-PHFL 144
>gi|395007049|ref|ZP_10390828.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Acidovorax sp. CF316]
gi|394314936|gb|EJE51781.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Acidovorax sp. CF316]
Length = 110
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 44/68 (64%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
SP L AVVG +PRTEI+ +LW YI+ NNLQD +NKR I D L+ +F MF++
Sbjct: 42 SPALAAVVGSAPLPRTEIISKLWVYIKANNLQDAANKRNINADAKLKELFGKPQVSMFEL 101
Query: 240 NKLLAKHI 247
L+ KH+
Sbjct: 102 AGLIGKHV 109
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 281 SEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISAL 340
S ALA +G+ + + E ++W YIK N+L+D N I DAKL+EL G +S
Sbjct: 42 SPALAAVVGSA--PLPRTEIISKLWVYIKANNLQDAANKRNINADAKLKELFGKPQVSMF 99
Query: 341 GIQEMLAR 348
+ ++ +
Sbjct: 100 ELAGLIGK 107
>gi|365089912|ref|ZP_09328420.1| SWIB/MDM2 domain-containing protein [Acidovorax sp. NO-1]
gi|363416605|gb|EHL23709.1| SWIB/MDM2 domain-containing protein [Acidovorax sp. NO-1]
Length = 106
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 44/68 (64%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
SP L AVVG +PRTEI+ +LW YI+ NNLQD +NKR I D L+ +F MF++
Sbjct: 38 SPALAAVVGSAPLPRTEIISKLWVYIKANNLQDAANKRNINADAKLKELFGKPQVSMFEL 97
Query: 240 NKLLAKHI 247
L+ KH+
Sbjct: 98 AGLIGKHV 105
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 281 SEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISAL 340
S ALA +G+ + + E ++W YIK N+L+D N I DAKL+EL G +S
Sbjct: 38 SPALAAVVGSA--PLPRTEIISKLWVYIKANNLQDAANKRNINADAKLKELFGKPQVSMF 95
Query: 341 GIQEMLAR 348
+ ++ +
Sbjct: 96 ELAGLIGK 103
>gi|351728366|ref|ZP_08946057.1| SWIB/MDM2 domain-containing protein [Acidovorax radicis N35]
Length = 106
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 44/68 (64%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
SP L AVVG +PRTEI+ +LW YI+ NNLQD +NKR I D L+ +F MF++
Sbjct: 38 SPALAAVVGSAPLPRTEIISKLWVYIKANNLQDAANKRNINADAKLKELFGKPQVSMFEL 97
Query: 240 NKLLAKHI 247
L+ KH+
Sbjct: 98 AGLIGKHV 105
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 281 SEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISAL 340
S ALA +G+ + + E ++W YIK N+L+D N I DAKL+EL G +S
Sbjct: 38 SPALAAVVGSA--PLPRTEIISKLWVYIKANNLQDAANKRNINADAKLKELFGKPQVSMF 95
Query: 341 GIQEMLAR 348
+ ++ +
Sbjct: 96 ELAGLIGK 103
>gi|332286949|ref|YP_004418860.1| hypothetical protein PT7_3696 [Pusillimonas sp. T7-7]
gi|330430902|gb|AEC22236.1| hypothetical protein PT7_3696 [Pusillimonas sp. T7-7]
Length = 90
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 48/68 (70%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
S L A++G A+PRTE+ K++W YI+K++LQDP N+R I DD LR +F + MF++
Sbjct: 22 SATLAAIIGPEAVPRTEVTKKIWDYIKKHDLQDPKNRRNINADDKLRPLFGKEQVSMFEL 81
Query: 240 NKLLAKHI 247
KL++ H+
Sbjct: 82 TKLVSGHL 89
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 266 STTEGMESGPSSVII-----SEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSM 320
+TTE P++ + S LA +G + + E TK++W+YIK + L+DP N
Sbjct: 2 ATTEKPARKPNAAFMKPLTPSATLAAIIGPEA--VPRTEVTKKIWDYIKKHDLQDPKNRR 59
Query: 321 VILCDAKLRELLGCESISALGIQEMLA 347
I D KLR L G E +S + ++++
Sbjct: 60 NINADDKLRPLFGKEQVSMFELTKLVS 86
>gi|384501394|gb|EIE91885.1| hypothetical protein RO3G_16596 [Rhizopus delemar RA 99-880]
Length = 151
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Query: 172 GLNKVCGVSPELQAVVG-QPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFE 230
GL+K +S L ++G + R EIVK+LW YI+ N LQDP+++R I+CD+ LR +F+
Sbjct: 53 GLSKPLILSASLSVIMGGDRELSRPEIVKRLWTYIKANQLQDPADRRFILCDNNLRSIFQ 112
Query: 231 TDCTDMFKMNKLLAKHIIPLEPTKESSKRF 260
D + F MN+ L H+ KE+ F
Sbjct: 113 KDRVNSFGMNRDLTAHLTKKVEKKETFNDF 142
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 278 VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESI 337
+I+S +L+ +G G RE+ + E KR+W YIK N L+DP + ILCD LR + + +
Sbjct: 58 LILSASLSVIMG-GDRELSRPEIVKRLWTYIKANQLQDPADRRFILCDNNLRSIFQKDRV 116
Query: 338 SALGIQEMLA 347
++ G+ L
Sbjct: 117 NSFGMNRDLT 126
>gi|91788673|ref|YP_549625.1| hypothetical protein Bpro_2811 [Polaromonas sp. JS666]
gi|91697898|gb|ABE44727.1| SWIB complex, BAF60b [Polaromonas sp. JS666]
Length = 152
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 44/73 (60%)
Query: 175 KVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCT 234
K +SP L AVVG +PRTEIV +LW YI+ LQD NKR I D+ L+ VF
Sbjct: 79 KALTLSPALAAVVGDKPLPRTEIVSKLWVYIKSKGLQDKVNKRMINADEKLKAVFGKPQV 138
Query: 235 DMFKMNKLLAKHI 247
MF+M L+ KH+
Sbjct: 139 SMFEMAGLIGKHV 151
>gi|426197657|gb|EKV47584.1| hypothetical protein AGABI2DRAFT_221859 [Agaricus bisporus var.
bisporus H97]
Length = 254
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 183 LQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKL 242
L A++ M R ++VK +W +I+ N LQ+PSNKR+IICD +++ VF + DMF+MNK+
Sbjct: 185 LSALLQVEKMSRPQVVKGIWDHIKGNALQNPSNKREIICDGSMKAVFNVEKIDMFQMNKV 244
Query: 243 LAKHI 247
L +H+
Sbjct: 245 LGQHL 249
Score = 41.2 bits (95), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 279 IISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESIS 338
I+SE L+ L +M + + K +W++IK N L++P N I+CD ++ + E I
Sbjct: 180 ILSEPLSALLQV--EKMSRPQVVKGIWDHIKGNALQNPSNKREIICDGSMKAVFNVEKID 237
Query: 339 ALGIQEMLA 347
+ ++L
Sbjct: 238 MFQMNKVLG 246
>gi|225709960|gb|ACO10826.1| Upstream activation factor subunit UAF30 [Caligus rogercresseyi]
Length = 237
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 53/91 (58%), Gaps = 4/91 (4%)
Query: 161 PVGAKRRGGPGG----LNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
P AKR+ GG K +S +L A+VG+ PR E+VKQ+WAYI++NNLQDPSNK
Sbjct: 145 PTKAKRKSKGGGGGNGFTKPLNLSEDLAAIVGKDVAPRHEVVKQVWAYIKENNLQDPSNK 204
Query: 217 RKIICDDALRVVFETDCTDMFKMNKLLAKHI 247
+ ICD+ L+ V F M K H+
Sbjct: 205 QFAICDEKLKKVIGEKKFKCFGMAKYFKNHM 235
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 280 ISEALAKFLGTGGREML-QAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESIS 338
+SE LA +G +++ + E K+VW YIK N+L+DP N +CD KL++++G +
Sbjct: 167 LSEDLAAIVG---KDVAPRHEVVKQVWAYIKENNLQDPSNKQFAICDEKLKKVIGEKKFK 223
Query: 339 ALGIQEMLARNHF 351
G+ + +NH
Sbjct: 224 CFGMAKYF-KNHM 235
>gi|160900051|ref|YP_001565633.1| SWIB/MDM2 domain-containing protein [Delftia acidovorans SPH-1]
gi|333913833|ref|YP_004487565.1| SWIB/MDM2 domain-containing protein [Delftia sp. Cs1-4]
gi|160365635|gb|ABX37248.1| SWIB/MDM2 domain protein [Delftia acidovorans SPH-1]
gi|333744033|gb|AEF89210.1| SWIB/MDM2 domain-containing protein [Delftia sp. Cs1-4]
Length = 99
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 43/68 (63%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
SP L AVVG +PRTEI+ +LW YI+ N LQD +NKR I D L+ VF MF+M
Sbjct: 31 SPALAAVVGSTPLPRTEIISKLWVYIKANKLQDAANKRMINADAKLKEVFGKPQVSMFEM 90
Query: 240 NKLLAKHI 247
L+ KH+
Sbjct: 91 AGLIGKHV 98
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 281 SEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISAL 340
S ALA +G+ + + E ++W YIK N L+D N +I DAKL+E+ G +S
Sbjct: 31 SPALAAVVGS--TPLPRTEIISKLWVYIKANKLQDAANKRMINADAKLKEVFGKPQVSMF 88
Query: 341 GIQEMLAR 348
+ ++ +
Sbjct: 89 EMAGLIGK 96
>gi|326507382|dbj|BAK03084.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326515542|dbj|BAK07017.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 138
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFE-TDCTDMF 237
VSP LQA +G +PRTE +K++WAYI++NNLQDP +K+ I+CD+ L+ +F +
Sbjct: 65 VSPALQAFMGAAEVPRTEAMKRIWAYIKQNNLQDPEDKKIIVCDEKLKALFAGRERVGFL 124
Query: 238 KMNKLLAKHII 248
++ KLL+ H +
Sbjct: 125 EVAKLLSPHFV 135
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELL-GCESIS 338
+S AL F+G E+ + EA KR+W YIK N+L+DP + +I+CD KL+ L G E +
Sbjct: 65 VSPALQAFMGAA--EVPRTEAMKRIWAYIKQNNLQDPEDKKIIVCDEKLKALFAGRERVG 122
Query: 339 ALGIQEMLARNHFLR 353
L + ++L+ HF++
Sbjct: 123 FLEVAKLLS-PHFVK 136
>gi|255555227|ref|XP_002518650.1| brg-1 associated factor, putative [Ricinus communis]
gi|223542031|gb|EEF43575.1| brg-1 associated factor, putative [Ricinus communis]
Length = 141
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 75/135 (55%), Gaps = 12/135 (8%)
Query: 118 PQELNFSQPQPSQA---AAPPPQPHSNVSKAEAFPQISAEVAKENPPVGAKRRGGPGGLN 174
PQ ++F +P PS + APP + + + + +E +RR P G+
Sbjct: 14 PQTVSFLKPYPSSSMLLVAPPSSANLRMVRTVTCCATVSSQQQE------QRR--PRGIM 65
Query: 175 KVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF-ETDC 233
K VSPE+ +VG +PRT+ +K++WA+I++NNLQDP NK+ IICD+ L+ +F D
Sbjct: 66 KPRRVSPEMAELVGASEIPRTQALKRIWAHIKENNLQDPENKKIIICDEKLKKIFGGRDR 125
Query: 234 TDMFKMNKLLAKHII 248
++ L++ H +
Sbjct: 126 VGFLEVAGLISPHFL 140
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 4/66 (6%)
Query: 290 TGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEM--LA 347
G E+ + +A KR+W +IK N+L+DP N +I+CD KL+++ G +G E+ L
Sbjct: 78 VGASEIPRTQALKRIWAHIKENNLQDPENKKIIICDEKLKKIFGGR--DRVGFLEVAGLI 135
Query: 348 RNHFLR 353
HFL+
Sbjct: 136 SPHFLK 141
>gi|398809571|ref|ZP_10568417.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Variovorax sp. CF313]
gi|398085579|gb|EJL76233.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Variovorax sp. CF313]
Length = 147
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 44/68 (64%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
SP L AVVG +PRT +V +LW YI+KNNLQD +NKR I D L+ +F MF++
Sbjct: 79 SPALAAVVGSTPLPRTAVVSKLWDYIKKNNLQDKANKRNINADAKLKEIFGKPQVSMFEL 138
Query: 240 NKLLAKHI 247
L+ KH+
Sbjct: 139 AALIGKHV 146
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 281 SEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISAL 340
S ALA +G+ + + ++W+YIK N+L+D N I DAKL+E+ G +S
Sbjct: 79 SPALAAVVGS--TPLPRTAVVSKLWDYIKKNNLQDKANKRNINADAKLKEIFGKPQVSMF 136
Query: 341 GIQEMLAR 348
+ ++ +
Sbjct: 137 ELAALIGK 144
>gi|239814872|ref|YP_002943782.1| SWIB/MDM2 domain-containing protein [Variovorax paradoxus S110]
gi|239801449|gb|ACS18516.1| SWIB/MDM2 domain protein [Variovorax paradoxus S110]
Length = 147
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 44/68 (64%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
SP L AVVG +PRT +V +LW YI+KNNLQD +NKR I D L+ +F MF++
Sbjct: 79 SPALAAVVGSTPLPRTAVVSKLWDYIKKNNLQDKANKRNINADAKLKEIFGKPQVSMFEL 138
Query: 240 NKLLAKHI 247
L+ KH+
Sbjct: 139 AALIGKHV 146
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 281 SEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISAL 340
S ALA +G+ + + ++W+YIK N+L+D N I DAKL+E+ G +S
Sbjct: 79 SPALAAVVGS--TPLPRTAVVSKLWDYIKKNNLQDKANKRNINADAKLKEIFGKPQVSMF 136
Query: 341 GIQEMLAR 348
+ ++ +
Sbjct: 137 ELAALIGK 144
>gi|15235320|ref|NP_195155.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]
gi|4455174|emb|CAB36706.1| putative protein [Arabidopsis thaliana]
gi|7270379|emb|CAB80146.1| putative protein [Arabidopsis thaliana]
gi|24899741|gb|AAN65085.1| putative protein [Arabidopsis thaliana]
gi|332660955|gb|AEE86355.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]
Length = 144
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 161 PVGAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKII 220
P + P G+ K VS +Q VVG P +PRT+ +K++WAYI++++LQDP NKR I+
Sbjct: 56 PTTTTKTREPRGIMKPRPVSQAMQDVVGVPEIPRTQALKRIWAYIKEHDLQDPQNKRDIL 115
Query: 221 CDDALRVVFE-TDCTDMFKMNKLLAKHII 248
CD+ L+ +FE + ++ KL+ H +
Sbjct: 116 CDEKLKKIFEGKERVGFLEIAKLIGPHFL 144
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 4/74 (5%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELL-GCESIS 338
+S+A+ +G E+ + +A KR+W YIK + L+DP N ILCD KL+++ G E +
Sbjct: 74 VSQAMQDVVGVP--EIPRTQALKRIWAYIKEHDLQDPQNKRDILCDEKLKKIFEGKERVG 131
Query: 339 ALGIQEMLARNHFL 352
L I +++ HFL
Sbjct: 132 FLEIAKLIG-PHFL 144
>gi|323335348|gb|EGA76635.1| Uaf30p [Saccharomyces cerevisiae Vin13]
gi|323346465|gb|EGA80753.1| Uaf30p [Saccharomyces cerevisiae Lalvin QA23]
Length = 219
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 56/76 (73%), Gaps = 3/76 (3%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+S L +++G+ + RTE+V++LWAY + +NLQ+P+NK++I+CD+ L ++ T+MF+
Sbjct: 117 LSKSLASLLGEHELTRTEVVRRLWAYXKAHNLQNPNNKKEILCDEKLELIL-GKSTNMFE 175
Query: 239 MNKLLAKHIIPLEPTK 254
M+K+LA H+ EP K
Sbjct: 176 MHKILASHMT--EPKK 189
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 65/130 (50%), Gaps = 14/130 (10%)
Query: 229 FETDCTDMFKMNKLLAKHIIP-LEPTKESSKRFKPDAESTTEGMESGPSSV--------- 278
FE D+ K N LA + + +K SS K D+E+ +E +V
Sbjct: 55 FERSLEDLLKENATLAIELTKEITVSKRSSGEEKNDSETKGTHVEKKKGTVSKSPISTRK 114
Query: 279 -IISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESI 337
+S++LA LG E+ + E +R+W Y K ++L++P N ILCD KL +LG +S
Sbjct: 115 VTLSKSLASLLGE--HELTRTEVVRRLWAYXKAHNLQNPNNKKEILCDEKLELILG-KST 171
Query: 338 SALGIQEMLA 347
+ + ++LA
Sbjct: 172 NMFEMHKILA 181
>gi|326511287|dbj|BAJ87657.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 157
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFE-TDCTDMF 237
VSP LQA +G +PRTE +K++WAYI++NNLQDP +K+ I+CD+ L+ +F +
Sbjct: 84 VSPALQAFMGAAEVPRTEAMKRIWAYIKQNNLQDPEDKKIIVCDEKLKALFAGRERVGFL 143
Query: 238 KMNKLLAKHII 248
++ KLL+ H +
Sbjct: 144 EVAKLLSPHFV 154
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELL-GCESIS 338
+S AL F+G E+ + EA KR+W YIK N+L+DP + +I+CD KL+ L G E +
Sbjct: 84 VSPALQAFMGAA--EVPRTEAMKRIWAYIKQNNLQDPEDKKIIVCDEKLKALFAGRERVG 141
Query: 339 ALGIQEMLARNHFLR 353
L + ++L+ HF++
Sbjct: 142 FLEVAKLLS-PHFVK 155
>gi|315045241|ref|XP_003171996.1| hypothetical protein MGYG_06538 [Arthroderma gypseum CBS 118893]
gi|311344339|gb|EFR03542.1| hypothetical protein MGYG_06538 [Arthroderma gypseum CBS 118893]
Length = 272
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Query: 171 GGLNKVCGVSPELQAVVG-QPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF 229
GG +K +SP L A++G + + R + VK++W YIR++ LQDP+++R+I CDD +R VF
Sbjct: 190 GGFHKPLALSPALSALLGGEVTLSRPQTVKKVWEYIREHELQDPNDRRQIRCDDLMRPVF 249
Query: 230 ETDCTDMFKMNKLLAKHI 247
+ D MF M K+L +++
Sbjct: 250 KQDRIHMFTMTKVLNQNL 267
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISA 339
+S AL+ LG G + + + K+VWEYI+ + L+DP + I CD +R + + I
Sbjct: 198 LSPALSALLG-GEVTLSRPQTVKKVWEYIREHELQDPNDRRQIRCDDLMRPVFKQDRIHM 256
Query: 340 LGIQEMLARNHF 351
+ ++L +N +
Sbjct: 257 FTMTKVLNQNLY 268
>gi|225709694|gb|ACO10693.1| Upstream activation factor subunit UAF30 [Caligus rogercresseyi]
Length = 237
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 45/70 (64%)
Query: 178 GVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMF 237
+S +L A+VG+ PR E+VKQ+WAYI++NNLQDPSNK+ ICD+ L+ V F
Sbjct: 166 NLSEDLAAIVGKDVAPRHEVVKQVWAYIKENNLQDPSNKQFAICDEKLKKVIGEKKFKCF 225
Query: 238 KMNKLLAKHI 247
M K H+
Sbjct: 226 GMAKYFKNHM 235
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 280 ISEALAKFLGTGGREML-QAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESIS 338
+SE LA +G +++ + E K+VW YIK N+L+DP N +CD KL++++G +
Sbjct: 167 LSEDLAAIVG---KDVAPRHEVVKQVWAYIKENNLQDPSNKQFAICDEKLKKVIGEKKFK 223
Query: 339 ALGIQEMLARNHF 351
G+ + +NH
Sbjct: 224 CFGMAKYF-KNHM 235
>gi|384493380|gb|EIE83871.1| hypothetical protein RO3G_08576 [Rhizopus delemar RA 99-880]
Length = 262
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 58/90 (64%), Gaps = 4/90 (4%)
Query: 159 NPPVGAKRRGGPGGLNKVCGVSPELQAVV-GQPAMPRTEIVKQLWAYIRKNNLQDPSNKR 217
N P KR+ G LNK +SP L ++ G + R E+V++LW YI++N+LQDP+++R
Sbjct: 149 NAPPKPKRKTG---LNKPLLLSPVLSDLMDGAKELSRPELVQKLWKYIKENDLQDPADRR 205
Query: 218 KIICDDALRVVFETDCTDMFKMNKLLAKHI 247
I+CD L+ +FE D + F MNK L+ H+
Sbjct: 206 FILCDVKLKKIFEQDRINSFAMNKDLSAHL 235
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 278 VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESI 337
+++S L+ + G +E+ + E +++W+YIK N L+DP + ILCD KL+++ + I
Sbjct: 164 LLLSPVLSDLMD-GAKELSRPELVQKLWKYIKENDLQDPADRRFILCDVKLKKIFEQDRI 222
Query: 338 SALGIQEMLA 347
++ + + L+
Sbjct: 223 NSFAMNKDLS 232
>gi|14423526|gb|AAK62445.1|AF387000_1 putative protein [Arabidopsis thaliana]
Length = 144
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 161 PVGAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKII 220
P + P G+ K VS +Q VVG P +PRT+ +K++WAYI++++LQDP NKR I+
Sbjct: 56 PTTTTKTREPRGIMKPRPVSQAMQDVVGVPEIPRTQALKRIWAYIKEHDLQDPQNKRDIL 115
Query: 221 CDDALRVVFE-TDCTDMFKMNKLLAKHII 248
CD+ L+ +FE + ++ KL+ H +
Sbjct: 116 CDEKLKKIFEGKERVGFLEIAKLIGPHFL 144
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 4/74 (5%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELL-GCESIS 338
+S+A+ +G E+ + +A KR+W YIK + L+DP N ILCD KL+++ G E +
Sbjct: 74 VSQAMQDVVGVP--EIPRTQALKRIWAYIKEHDLQDPQNKRDILCDEKLKKIFEGKERVG 131
Query: 339 ALGIQEMLARNHFL 352
L I +++ HFL
Sbjct: 132 FLEIAKLIG-PHFL 144
>gi|326477443|gb|EGE01453.1| SWIB/MDM2 domain-containing protein [Trichophyton equinum CBS
127.97]
Length = 272
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Query: 171 GGLNKVCGVSPELQAVVG-QPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF 229
GG +K +SP L A++G + + R + VK++W YIR++ LQDP+++R+I CDD +R VF
Sbjct: 190 GGFHKPLALSPALSALLGGEVTLSRPQTVKKVWEYIREHELQDPNDRRQIRCDDLMRPVF 249
Query: 230 ETDCTDMFKMNKLLAKHI 247
+ D MF M K+L +++
Sbjct: 250 KQDRIHMFTMTKVLNQNL 267
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISA 339
+S AL+ LG G + + + K+VWEYI+ + L+DP + I CD +R + + I
Sbjct: 198 LSPALSALLG-GEVTLSRPQTVKKVWEYIREHELQDPNDRRQIRCDDLMRPVFKQDRIHM 256
Query: 340 LGIQEMLARNHF 351
+ ++L +N +
Sbjct: 257 FTMTKVLNQNLY 268
>gi|398806154|ref|ZP_10565099.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Polaromonas sp. CF318]
gi|398089716|gb|EJL80222.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Polaromonas sp. CF318]
Length = 75
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/73 (49%), Positives = 44/73 (60%)
Query: 175 KVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCT 234
K +SP L AVVG +PRTEIV +LW YI+ LQD NKR I D+ LR VF
Sbjct: 2 KALTLSPALAAVVGDKPLPRTEIVSKLWVYIKSKGLQDKINKRMINADEKLRAVFGKAQV 61
Query: 235 DMFKMNKLLAKHI 247
MF+M L+ KH+
Sbjct: 62 SMFEMAGLIGKHV 74
Score = 37.4 bits (85), Expect = 9.9, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 277 SVIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCES 336
++ +S ALA +G + + + E ++W YIK L+D +N +I D KLR + G
Sbjct: 3 ALTLSPALAAVVGD--KPLPRTEIVSKLWVYIKSKGLQDKINKRMINADEKLRAVFGKAQ 60
Query: 337 ISALGIQEMLARN 349
+S + ++ ++
Sbjct: 61 VSMFEMAGLIGKH 73
>gi|409043948|gb|EKM53430.1| hypothetical protein PHACADRAFT_259812 [Phanerochaete carnosa
HHB-10118-sp]
Length = 253
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 51/77 (66%)
Query: 171 GGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFE 230
GG K +S L ++G + R + VK +W YI++ +LQ+P++KR+IICD+ ++ +F
Sbjct: 166 GGFTKEYILSQPLAELLGVTQLSRPQAVKHIWVYIKEKDLQNPADKREIICDEKMKKIFN 225
Query: 231 TDCTDMFKMNKLLAKHI 247
D MF+MN++L +H+
Sbjct: 226 VDKIGMFRMNQMLGEHL 242
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 279 IISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESIS 338
I+S+ LA+ LG ++ + +A K +W YIK L++P + I+CD K++++ + I
Sbjct: 173 ILSQPLAELLGV--TQLSRPQAVKHIWVYIKEKDLQNPADKREIICDEKMKKIFNVDKIG 230
Query: 339 ALGIQEMLA 347
+ +ML
Sbjct: 231 MFRMNQMLG 239
>gi|327295951|ref|XP_003232670.1| SWIB/MDM2 domain-containing protein [Trichophyton rubrum CBS
118892]
gi|326464981|gb|EGD90434.1| SWIB/MDM2 domain-containing protein [Trichophyton rubrum CBS
118892]
Length = 272
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Query: 171 GGLNKVCGVSPELQAVVG-QPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF 229
GG +K +SP L A++G + + R + VK++W YIR++ LQDP+++R+I CDD +R VF
Sbjct: 190 GGFHKPLALSPALSALLGGEVTLSRPQTVKKVWEYIREHELQDPNDRRQIRCDDLMRPVF 249
Query: 230 ETDCTDMFKMNKLLAKHI 247
+ D MF M K+L +++
Sbjct: 250 KQDRIHMFTMTKVLNQNL 267
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISA 339
+S AL+ LG G + + + K+VWEYI+ + L+DP + I CD +R + + I
Sbjct: 198 LSPALSALLG-GEVTLSRPQTVKKVWEYIREHELQDPNDRRQIRCDDLMRPVFKQDRIHM 256
Query: 340 LGIQEMLARNHF 351
+ ++L +N +
Sbjct: 257 FTMTKVLNQNLY 268
>gi|296810550|ref|XP_002845613.1| SWIB/MDM2 domain-containing protein [Arthroderma otae CBS 113480]
gi|238843001|gb|EEQ32663.1| SWIB/MDM2 domain-containing protein [Arthroderma otae CBS 113480]
Length = 272
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Query: 171 GGLNKVCGVSPELQAVVG-QPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF 229
GG +K +SP L A++G + + R + VK++W YIR+N LQDP+++R+I CD +R VF
Sbjct: 190 GGFHKPMALSPALSALLGGEVTLSRPQTVKKVWEYIRENELQDPADRRQIRCDGLMRPVF 249
Query: 230 ETDCTDMFKMNKLLAKHI 247
+ D MF M K+L +++
Sbjct: 250 KQDRIHMFTMTKILNQNL 267
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISA 339
+S AL+ LG G + + + K+VWEYI+ N L+DP + I CD +R + + I
Sbjct: 198 LSPALSALLG-GEVTLSRPQTVKKVWEYIRENELQDPADRRQIRCDGLMRPVFKQDRIHM 256
Query: 340 LGIQEMLARNHF 351
+ ++L +N +
Sbjct: 257 FTMTKILNQNLY 268
>gi|326476557|gb|EGE00567.1| hypothetical protein TESG_07838 [Trichophyton tonsurans CBS 112818]
Length = 265
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Query: 171 GGLNKVCGVSPELQAVVG-QPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF 229
GG +K +SP L A++G + + R + VK++W YIR++ LQDP+++R+I CDD +R VF
Sbjct: 183 GGFHKPLALSPALSALLGGEVTLSRPQTVKKVWEYIREHELQDPNDRRQIRCDDLMRPVF 242
Query: 230 ETDCTDMFKMNKLLAKHI 247
+ D MF M K+L +++
Sbjct: 243 KQDRIHMFTMTKVLNQNL 260
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISA 339
+S AL+ LG G + + + K+VWEYI+ + L+DP + I CD +R + + I
Sbjct: 191 LSPALSALLG-GEVTLSRPQTVKKVWEYIREHELQDPNDRRQIRCDDLMRPVFKQDRIHM 249
Query: 340 LGIQEMLARNHF 351
+ ++L +N +
Sbjct: 250 FTMTKVLNQNLY 261
>gi|407921472|gb|EKG14615.1| hypothetical protein MPH_08195 [Macrophomina phaseolina MS6]
Length = 1154
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 55/81 (67%)
Query: 171 GGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFE 230
GG +K +S L ++G+ + R + VK++W Y+++ +LQDP++KR+I CD+ +R VF+
Sbjct: 1073 GGFHKPMMLSEPLSELLGETQLSRPQCVKKIWEYVKERDLQDPNDKRQIRCDEPMRAVFK 1132
Query: 231 TDCTDMFKMNKLLAKHIIPLE 251
D MF MNK+L +++ ++
Sbjct: 1133 QDRVHMFTMNKILNQNLYAVD 1153
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 278 VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESI 337
+++SE L++ LG ++ + + K++WEY+K L+DP + I CD +R + + +
Sbjct: 1079 MMLSEPLSELLGET--QLSRPQCVKKIWEYVKERDLQDPNDKRQIRCDEPMRAVFKQDRV 1136
Query: 338 SALGIQEMLARNHF 351
+ ++L +N +
Sbjct: 1137 HMFTMNKILNQNLY 1150
>gi|241765352|ref|ZP_04763327.1| DNA topoisomerase III [Acidovorax delafieldii 2AN]
gi|241364917|gb|EER59860.1| DNA topoisomerase III [Acidovorax delafieldii 2AN]
Length = 969
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 42/65 (64%)
Query: 183 LQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKL 242
L AV+G + R E VK+LW YI+ +NLQDP +KR I+ DD LR VF D MF++ +
Sbjct: 902 LAAVIGTEPVARPEAVKKLWEYIKAHNLQDPKDKRTIVADDKLRAVFGKDSAGMFELAGI 961
Query: 243 LAKHI 247
L H+
Sbjct: 962 LGNHL 966
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 284 LAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQ 343
LA +GT + + EA K++WEYIK ++L+DP + I+ D KLR + G +S +
Sbjct: 902 LAAVIGT--EPVARPEAVKKLWEYIKAHNLQDPKDKRTIVADDKLRAVFGKDSAGMFELA 959
Query: 344 EMLARNHF 351
+L NH
Sbjct: 960 GILG-NHL 966
>gi|222112503|ref|YP_002554767.1| DNA topoisomerase III [Acidovorax ebreus TPSY]
gi|221731947|gb|ACM34767.1| DNA topoisomerase III [Acidovorax ebreus TPSY]
Length = 981
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 45/68 (66%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
S +L AV+G + R E VK++W YI+ +NLQDP +KR I+ DD LR VF D MF++
Sbjct: 913 SAQLAAVIGTEPVARPEAVKKMWDYIKAHNLQDPQDKRTIVADDKLRAVFGKDRIGMFEL 972
Query: 240 NKLLAKHI 247
+L +H+
Sbjct: 973 AGILGQHL 980
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 281 SEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISAL 340
S LA +GT + + EA K++W+YIK ++L+DP + I+ D KLR + G + I
Sbjct: 913 SAQLAAVIGT--EPVARPEAVKKMWDYIKAHNLQDPQDKRTIVADDKLRAVFGKDRIGMF 970
Query: 341 GIQEMLARN 349
+ +L ++
Sbjct: 971 ELAGILGQH 979
>gi|393724614|ref|ZP_10344541.1| hypothetical protein SPAM2_13223 [Sphingomonas sp. PAMC 26605]
Length = 93
Score = 72.4 bits (176), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/77 (42%), Positives = 54/77 (70%)
Query: 171 GGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFE 230
GG+ S +L A+VG +PR+E++ ++WAYI++++LQ+P NKR+I+ D+ L+ +F
Sbjct: 15 GGIFAPITPSADLAAIVGADKLPRSEVISKVWAYIKQHDLQNPENKREIVADEKLKKIFG 74
Query: 231 TDCTDMFKMNKLLAKHI 247
D MF+MNK LA H+
Sbjct: 75 KDKVTMFEMNKHLAGHM 91
Score = 37.7 bits (86), Expect = 8.9, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 34/57 (59%)
Query: 291 GGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLA 347
G ++ ++E +VW YIK + L++P N I+ D KL+++ G + ++ + + LA
Sbjct: 32 GADKLPRSEVISKVWAYIKQHDLQNPENKREIVADEKLKKIFGKDKVTMFEMNKHLA 88
>gi|121596274|ref|YP_988170.1| DNA topoisomerase III [Acidovorax sp. JS42]
gi|120608354|gb|ABM44094.1| DNA topoisomerase III [Acidovorax sp. JS42]
Length = 981
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 45/68 (66%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
S +L AV+G + R E VK++W YI+ +NLQDP +KR I+ DD LR VF D MF++
Sbjct: 913 SAQLAAVIGTEPVARPEAVKKMWDYIKAHNLQDPQDKRTIVADDKLRAVFGKDRIGMFEL 972
Query: 240 NKLLAKHI 247
+L +H+
Sbjct: 973 AGILGQHL 980
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 281 SEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISAL 340
S LA +GT + + EA K++W+YIK ++L+DP + I+ D KLR + G + I
Sbjct: 913 SAQLAAVIGT--EPVARPEAVKKMWDYIKAHNLQDPQDKRTIVADDKLRAVFGKDRIGMF 970
Query: 341 GIQEMLARN 349
+ +L ++
Sbjct: 971 ELAGILGQH 979
>gi|50288521|ref|XP_446690.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525998|emb|CAG59617.1| unnamed protein product [Candida glabrata]
Length = 241
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 58/92 (63%), Gaps = 9/92 (9%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
V+PELQAV+G RTEIV+ LW YI+++NLQ+P +KR+II D L V +D+F
Sbjct: 130 VTPELQAVIGTHYQSRTEIVRNLWKYIKEHNLQNPDDKRQIISDAMLEPVL-GKTSDIFM 188
Query: 239 MNKLLAKHII---PLEPTKESSKRFKPDAEST 267
M++ L HI+ P+E ++ + D EST
Sbjct: 189 MHRALKHHILGPAPIE-----AEVIRTDQEST 215
>gi|326514564|dbj|BAJ96269.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326526563|dbj|BAJ97298.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 276
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 37/46 (80%)
Query: 152 SAEVAKENPPVGAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEI 197
SA KE+ G KRRGGPGGLNK+CGVSPELQA+VG+P M RTE+
Sbjct: 204 SARTKKESASTGVKRRGGPGGLNKICGVSPELQAIVGEPTMARTEV 249
>gi|347820616|ref|ZP_08874050.1| DNA topoisomerase III [Verminephrobacter aporrectodeae subsp.
tuberculatae At4]
Length = 961
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 42/65 (64%)
Query: 183 LQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKL 242
L AV+G + R E +K+LW YIR+N LQDP NKR I+ D LR VF D MF++ +
Sbjct: 896 LAAVIGSAPVTRPEAIKKLWEYIRENKLQDPRNKRSIVADAKLRAVFGKDQAGMFELAGI 955
Query: 243 LAKHI 247
L +H+
Sbjct: 956 LGQHL 960
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Query: 283 ALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLG 333
ALA +G+ + + EA K++WEYI+ N L+DP N I+ DAKLR + G
Sbjct: 895 ALAAVIGSA--PVTRPEAIKKLWEYIRENKLQDPRNKRSIVADAKLRAVFG 943
>gi|409080743|gb|EKM81103.1| hypothetical protein AGABI1DRAFT_56449 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 254
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 47/65 (72%)
Query: 183 LQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKL 242
L A++ M R ++VK +W +I+ N LQ+P+NKR+IICD +++ VF + DMF+MNK+
Sbjct: 185 LSALLQVEKMSRPQVVKGIWDHIKGNALQNPNNKREIICDGSMKAVFNVEKIDMFQMNKV 244
Query: 243 LAKHI 247
L +H+
Sbjct: 245 LGQHL 249
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 279 IISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESIS 338
I+SE L+ L +M + + K +W++IK N L++P N I+CD ++ + E I
Sbjct: 180 ILSEPLSALLQV--EKMSRPQVVKGIWDHIKGNALQNPNNKREIICDGSMKAVFNVEKID 237
Query: 339 ALGIQEMLA 347
+ ++L
Sbjct: 238 MFQMNKVLG 246
>gi|358333785|dbj|GAA31139.2| upstream activation factor subunit UAF30, partial [Clonorchis
sinensis]
Length = 204
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 57/103 (55%), Gaps = 6/103 (5%)
Query: 152 SAEVAKENPPVGA----KRRGGPG--GLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYI 205
SA ++ P G +R G G G + G+S E+ A VGQ M R E+VK+ W+
Sbjct: 101 SANGMRKRPSSGKPKVERRSSGSGKSGFTRPLGLSDEMSAYVGQKTMSRAELVKRFWSLA 160
Query: 206 RKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHII 248
++NNL DP NK+ +IC++ + +F MF + K L +HI+
Sbjct: 161 KENNLFDPDNKQYVICNEDWQRLFGQKRFRMFGIAKHLKRHIL 203
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 261 KPDAESTTEGMESGPSSVI----ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDP 316
KP E + G SG S +S+ ++ ++G + M +AE KR W K N+L DP
Sbjct: 113 KPKVERRSSG--SGKSGFTRPLGLSDEMSAYVGQ--KTMSRAELVKRFWSLAKENNLFDP 168
Query: 317 LNSMVILCDAKLRELLGCESISALGIQEMLARNHFL 352
N ++C+ + L G + GI + L R H L
Sbjct: 169 DNKQYVICNEDWQRLFGQKRFRMFGIAKHLKR-HIL 203
>gi|323353173|gb|EGA85473.1| Tri1p [Saccharomyces cerevisiae VL3]
Length = 217
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 66/107 (61%), Gaps = 5/107 (4%)
Query: 172 GLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFET 231
+ KV +P LQ +G +PRT++VK +W YI++++LQ+P ++R+I+CD+ + +F
Sbjct: 111 SVRKVLLSAP-LQKFLGSEELPRTQVVKMIWQYIKEHDLQNPKDRREILCDEKMEPIFGK 169
Query: 232 DCTDMFKMNKLLAKHII-PLEPTK-ESSKRFKPDAESTTEGMESGPS 276
T MF MNKLL KH+ P E K E ++ P+ E E ES P+
Sbjct: 170 KMT-MFSMNKLLTKHLFNPDEIVKHEEEQKQTPEKEIKLEN-ESLPN 214
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 278 VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESI 337
V++S L KFLG+ E+ + + K +W+YIK + L++P + ILCD K+ + G + +
Sbjct: 115 VLLSAPLQKFLGS--EELPRTQVVKMIWQYIKEHDLQNPKDRREILCDEKMEPIFG-KKM 171
Query: 338 SALGIQEMLARNHF 351
+ + ++L ++ F
Sbjct: 172 TMFSMNKLLTKHLF 185
>gi|375149107|ref|YP_005011548.1| SWIB/MDM2 domain-containing protein [Niastella koreensis GR20-10]
gi|361063153|gb|AEW02145.1| SWIB/MDM2 domain-containing protein [Niastella koreensis GR20-10]
Length = 127
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 45/68 (66%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
SP L V+G +PRTEIVK++W YI+KN LQD NKR I D L+ +F D MF++
Sbjct: 59 SPVLAEVIGNKPLPRTEIVKKIWEYIKKNKLQDNKNKRMINADSKLKPLFGKDQISMFEL 118
Query: 240 NKLLAKHI 247
K++ KH+
Sbjct: 119 AKVVNKHV 126
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%)
Query: 290 TGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLAR 348
G + + + E K++WEYIK N L+D N +I D+KL+ L G + IS + +++ +
Sbjct: 66 IGNKPLPRTEIVKKIWEYIKKNKLQDNKNKRMINADSKLKPLFGKDQISMFELAKVVNK 124
>gi|407941365|ref|YP_006857006.1| DNA topoisomerase III [Acidovorax sp. KKS102]
gi|407899159|gb|AFU48368.1| DNA topoisomerase III [Acidovorax sp. KKS102]
Length = 969
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 42/65 (64%)
Query: 183 LQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKL 242
L AV+G + R E VK++W YI+ +NLQDP +KR I+ DD LR VF D MF++ +
Sbjct: 902 LAAVIGNEPVARPEAVKKMWEYIKAHNLQDPKDKRTIVADDKLRAVFGKDSAGMFELAGI 961
Query: 243 LAKHI 247
L H+
Sbjct: 962 LGNHL 966
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 299 EATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNHF 351
EA K++WEYIK ++L+DP + I+ D KLR + G +S + +L NH
Sbjct: 915 EAVKKMWEYIKAHNLQDPKDKRTIVADDKLRAVFGKDSAGMFELAGILG-NHL 966
>gi|406910432|gb|EKD50456.1| hypothetical protein ACD_62C00538G0002 [uncultured bacterium]
Length = 85
Score = 72.0 bits (175), Expect = 4e-10, Method: Composition-based stats.
Identities = 36/66 (54%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 183 LQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFE-TDCTDMFKMNK 241
L AVVG +PRTE+VK+LW YI+KN LQD NKR I DD L++VF+ +MF+M K
Sbjct: 19 LAAVVGAKPIPRTEVVKKLWEYIKKNKLQDAKNKRNINADDKLKLVFDGKKQVNMFEMTK 78
Query: 242 LLAKHI 247
L++KH+
Sbjct: 79 LVSKHL 84
>gi|171056886|ref|YP_001789235.1| SWIB/MDM2 domain-containing protein [Leptothrix cholodnii SP-6]
gi|170774331|gb|ACB32470.1| SWIB/MDM2 domain protein [Leptothrix cholodnii SP-6]
Length = 133
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%)
Query: 164 AKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDD 223
A +R K S L AV+G PRTE+ K++W YI+K+ LQD +NKR I D
Sbjct: 49 AAKRTPNAAFMKAMTPSAALAAVIGNTPAPRTEVTKKVWEYIKKHQLQDAANKRMINADA 108
Query: 224 ALRVVFETDCTDMFKMNKLLAKHI 247
L+ +F+ D MF+M KL++ +
Sbjct: 109 KLKAIFKKDQVSMFEMTKLISDQL 132
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 281 SEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISAL 340
S ALA +G + E TK+VWEYIK + L+D N +I DAKL+ + + +S
Sbjct: 65 SAALAAVIGNTPAP--RTEVTKKVWEYIKKHQLQDAANKRMINADAKLKAIFKKDQVSMF 122
Query: 341 GIQEMLA 347
+ ++++
Sbjct: 123 EMTKLIS 129
>gi|6323889|ref|NP_013960.1| Tri1p [Saccharomyces cerevisiae S288c]
gi|2497196|sp|Q05024.1|TRI1_YEAST RecName: Full=Protein TRI1
gi|887614|emb|CAA90204.1| unknown [Saccharomyces cerevisiae]
gi|45269842|gb|AAS56301.1| YMR233W [Saccharomyces cerevisiae]
gi|151945938|gb|EDN64170.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|190408460|gb|EDV11725.1| hypothetical protein SCRG_02128 [Saccharomyces cerevisiae RM11-1a]
gi|207342139|gb|EDZ69997.1| YMR233Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256271577|gb|EEU06619.1| Tri1p [Saccharomyces cerevisiae JAY291]
gi|259148819|emb|CAY82064.1| Tri1p [Saccharomyces cerevisiae EC1118]
gi|285814238|tpg|DAA10133.1| TPA: Tri1p [Saccharomyces cerevisiae S288c]
gi|323332147|gb|EGA73558.1| Tri1p [Saccharomyces cerevisiae AWRI796]
gi|323347044|gb|EGA81320.1| Tri1p [Saccharomyces cerevisiae Lalvin QA23]
gi|392297403|gb|EIW08503.1| Tri1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 226
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 66/107 (61%), Gaps = 5/107 (4%)
Query: 172 GLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFET 231
+ KV +P LQ +G +PRT++VK +W YI++++LQ+P ++R+I+CD+ + +F
Sbjct: 120 SVRKVLLSAP-LQKFLGSEELPRTQVVKMIWQYIKEHDLQNPKDRREILCDEKMEPIFGK 178
Query: 232 DCTDMFKMNKLLAKHII-PLEPTK-ESSKRFKPDAESTTEGMESGPS 276
T MF MNKLL KH+ P E K E ++ P+ E E ES P+
Sbjct: 179 KMT-MFSMNKLLTKHLFNPDEIVKHEEEQKQTPEKEIKLEN-ESLPN 223
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 278 VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESI 337
V++S L KFLG+ E+ + + K +W+YIK + L++P + ILCD K+ + G + +
Sbjct: 124 VLLSAPLQKFLGS--EELPRTQVVKMIWQYIKEHDLQNPKDRREILCDEKMEPIFG-KKM 180
Query: 338 SALGIQEMLARNHF 351
+ + ++L ++ F
Sbjct: 181 TMFSMNKLLTKHLF 194
>gi|406984179|gb|EKE05280.1| hypothetical protein ACD_19C00370G0002 [uncultured bacterium]
Length = 85
Score = 72.0 bits (175), Expect = 5e-10, Method: Composition-based stats.
Identities = 35/77 (45%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Query: 172 GLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFET 231
L K +S +L+AVVG+ MPR+++VK++W YI+K +LQ+P+NKR I+ D+ L+++F+
Sbjct: 8 ALMKPMTLSSDLEAVVGKGPMPRSQVVKKIWEYIKKYDLQNPANKRNILADEKLKLLFDG 67
Query: 232 DC-TDMFKMNKLLAKHI 247
MF+M KL++KHI
Sbjct: 68 KGEVTMFEMTKLISKHI 84
>gi|403217664|emb|CCK72157.1| hypothetical protein KNAG_0J00740 [Kazachstania naganishii CBS
8797]
Length = 194
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
Query: 168 GGPGGLN-KVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALR 226
G P GL + +S +L +G +PRTE+V+ +W YI+ + LQ+P+++R+I CD+A++
Sbjct: 104 GAPKGLAARELVLSEKLAQFLGAARLPRTEVVRGVWDYIKAHELQNPADRREIFCDEAMQ 163
Query: 227 VVFETDCTDMFKMNKLLAKHIIPLEPTKESSK 258
VF T MF++NK+L+ H+ E E K
Sbjct: 164 PVFGRKMT-MFQLNKILSDHLFKPEEVVEGDK 194
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 278 VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLG 333
+++SE LA+FLG + + E + VW+YIK + L++P + I CD ++ + G
Sbjct: 114 LVLSEKLAQFLGAA--RLPRTEVVRGVWDYIKAHELQNPADRREIFCDEAMQPVFG 167
>gi|323307663|gb|EGA60928.1| Tri1p [Saccharomyces cerevisiae FostersO]
Length = 226
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 66/107 (61%), Gaps = 5/107 (4%)
Query: 172 GLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFET 231
+ KV +P LQ +G +PRT++VK +W YI++++LQ+P ++R+I+CD+ + +F
Sbjct: 120 SVRKVLLSAP-LQKFLGSEELPRTQVVKMIWQYIKEHDLQNPKDRREILCDEKMEPIFGK 178
Query: 232 DCTDMFKMNKLLAKHII-PLEPTK-ESSKRFKPDAESTTEGMESGPS 276
T MF MNKLL KH+ P E K E ++ P+ E E ES P+
Sbjct: 179 KMT-MFSMNKLLTKHLFNPDEIVKHEEEQKQTPEKEIKLEN-ESLPN 223
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 278 VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESI 337
V++S L KFLG+ E+ + + K +W+YIK + L++P + ILCD K+ + G + +
Sbjct: 124 VLLSAPLQKFLGS--EELPRTQVVKMIWQYIKEHDLQNPKDRREILCDEKMEPIFG-KKM 180
Query: 338 SALGIQEMLARNHF 351
+ + ++L ++ F
Sbjct: 181 TMFSMNKLLTKHLF 194
>gi|323303447|gb|EGA57242.1| Tri1p [Saccharomyces cerevisiae FostersB]
Length = 226
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 66/107 (61%), Gaps = 5/107 (4%)
Query: 172 GLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFET 231
+ KV +P LQ +G +PRT++VK +W YI++++LQ+P ++R+I+CD+ + +F
Sbjct: 120 SVRKVLLSAP-LQKFLGSEELPRTQVVKMIWQYIKEHDLQNPKDRREILCDEKMEPIFGK 178
Query: 232 DCTDMFKMNKLLAKHII-PLEPTK-ESSKRFKPDAESTTEGMESGPS 276
T MF MNKLL KH+ P E K E ++ P+ E E ES P+
Sbjct: 179 KMT-MFSMNKLLTKHLFNPDEIVKHEEEQKQTPEKEIKLEN-ESLPN 223
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 278 VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESI 337
V++S L KFLG+ E+ + + K +W+YIK + L++P + ILCD K+ + G + +
Sbjct: 124 VLLSAPLQKFLGS--EELPRTQVVKMIWQYIKEHDLQNPKDRREILCDEKMEPIFG-KKM 180
Query: 338 SALGIQEMLARNHF 351
+ + ++L ++ F
Sbjct: 181 TMFSMNKLLTKHLF 194
>gi|365763939|gb|EHN05465.1| Tri1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 226
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 66/107 (61%), Gaps = 5/107 (4%)
Query: 172 GLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFET 231
+ KV +P LQ +G +PRT++VK +W YI++++LQ+P ++R+I+CD+ + +F
Sbjct: 120 SVRKVLLSAP-LQKFLGSEELPRTQVVKMIWQYIKEHDLQNPKDRREILCDEKMEPIFGK 178
Query: 232 DCTDMFKMNKLLAKHII-PLEPTK-ESSKRFKPDAESTTEGMESGPS 276
T MF MNKLL KH+ P E K E ++ P+ E E ES P+
Sbjct: 179 KMT-MFSMNKLLTKHLFNPDEIVKHEEEQKQTPEKEIKLEN-ESLPN 223
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 278 VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESI 337
V++S L KFLG+ E+ + + K +W+YIK + L++P + ILCD K+ + G + +
Sbjct: 124 VLLSAPLQKFLGS--EELPRTQVVKMIWQYIKEHDLQNPKDRREILCDEKMEPIFG-KKM 180
Query: 338 SALGIQEMLARNHF 351
+ + ++L ++ F
Sbjct: 181 TMFSMNKLLTKHLF 194
>gi|351731621|ref|ZP_08949312.1| DNA topoisomerase III [Acidovorax radicis N35]
Length = 975
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 42/65 (64%)
Query: 183 LQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKL 242
L AV+G + R E VK++W YI+ +NLQDP +KR I+ DD LR VF D MF++ +
Sbjct: 907 LAAVIGTEPVARPEAVKKMWEYIKAHNLQDPKDKRTIVADDKLRAVFGKDSAGMFELAGI 966
Query: 243 LAKHI 247
L H+
Sbjct: 967 LGNHL 971
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 284 LAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQ 343
LA +GT + + EA K++WEYIK ++L+DP + I+ D KLR + G +S +
Sbjct: 907 LAAVIGT--EPVARPEAVKKMWEYIKAHNLQDPKDKRTIVADDKLRAVFGKDSAGMFELA 964
Query: 344 EMLARNHF 351
+L NH
Sbjct: 965 GILG-NHL 971
>gi|241766425|ref|ZP_04764300.1| SWIB/MDM2 domain protein [Acidovorax delafieldii 2AN]
gi|241363386|gb|EER58892.1| SWIB/MDM2 domain protein [Acidovorax delafieldii 2AN]
Length = 110
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 44/68 (64%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
SP L AVVG +PRTEI+ +LW YI+ +NLQD +NKR I D L+ +F MF++
Sbjct: 42 SPALAAVVGSAPLPRTEIISKLWVYIKAHNLQDATNKRNINADAKLKELFGKPQVSMFEL 101
Query: 240 NKLLAKHI 247
L+ KH+
Sbjct: 102 AGLIGKHV 109
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 281 SEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISAL 340
S ALA +G+ + + E ++W YIK ++L+D N I DAKL+EL G +S
Sbjct: 42 SPALAAVVGSA--PLPRTEIISKLWVYIKAHNLQDATNKRNINADAKLKELFGKPQVSMF 99
Query: 341 GIQEMLAR 348
+ ++ +
Sbjct: 100 ELAGLIGK 107
>gi|366991355|ref|XP_003675443.1| hypothetical protein NCAS_0C00860 [Naumovozyma castellii CBS 4309]
gi|342301308|emb|CCC69076.1| hypothetical protein NCAS_0C00860 [Naumovozyma castellii CBS 4309]
Length = 227
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 71/113 (62%), Gaps = 2/113 (1%)
Query: 137 QPHSNVSKAEAFPQISAEVAKENPPVGAKRRGGPGGLN-KVCGVSPELQAVVGQPAMPRT 195
+ S SK ++ P+++ + ++ K G ++ K +S LQ ++G+ +PRT
Sbjct: 106 KSRSTTSKKKSSPKVTEDGKEKKKKRKRKDAEGSNSISAKKYVLSEPLQQLIGEKELPRT 165
Query: 196 EIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHII 248
++VK +W+YI+++NLQ+PS++R+II D+ + VF T +F M+K+L+KH+
Sbjct: 166 QVVKMVWSYIKEHNLQNPSDRREIISDELMEPVFGKKMT-IFSMHKILSKHLF 217
>gi|91090326|ref|XP_966482.1| PREDICTED: similar to conserved hypothetical protein [Tribolium
castaneum]
gi|270013422|gb|EFA09870.1| hypothetical protein TcasGA2_TC012018 [Tribolium castaneum]
Length = 257
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 45/75 (60%)
Query: 174 NKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDC 233
K +SPEL A+VGQ +M R E+VK++WA I++ +L DP NK+ ICDDAL V
Sbjct: 182 TKTMTLSPELAALVGQDSMARHEVVKRVWAIIKERDLYDPKNKQYAICDDALFKVIGVKR 241
Query: 234 TDMFKMNKLLAKHII 248
F M K L H I
Sbjct: 242 FRTFGMMKFLKNHFI 256
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 277 SVIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCES 336
++ +S LA +G M + E KRVW IK L DP N +CD L +++G +
Sbjct: 184 TMTLSPELAALVGQDS--MARHEVVKRVWAIIKERDLYDPKNKQYAICDDALFKVIGVKR 241
Query: 337 ISALGIQEMLARNHFL 352
G+ + L +NHF+
Sbjct: 242 FRTFGMMKFL-KNHFI 256
>gi|349580524|dbj|GAA25684.1| K7_Ymr233wp [Saccharomyces cerevisiae Kyokai no. 7]
Length = 223
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 65/106 (61%), Gaps = 5/106 (4%)
Query: 172 GLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFET 231
+ KV +P LQ +G +PRT++VK +W YI++++LQ+P ++R+I+CD+ + +F
Sbjct: 120 SVRKVLLSAP-LQKFLGSEELPRTQVVKMIWQYIKEHDLQNPKDRREILCDEKMEPIFGK 178
Query: 232 DCTDMFKMNKLLAKHII-PLEPTK-ESSKRFKPDAESTTEGMESGP 275
T MF MNKLL KH+ P E K E ++ P+ E E ES P
Sbjct: 179 KMT-MFSMNKLLTKHLFNPDEIVKHEEEQKQTPEKEIKLEN-ESLP 222
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 278 VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESI 337
V++S L KFLG+ E+ + + K +W+YIK + L++P + ILCD K+ + G + +
Sbjct: 124 VLLSAPLQKFLGS--EELPRTQVVKMIWQYIKEHDLQNPKDRREILCDEKMEPIFG-KKM 180
Query: 338 SALGIQEMLARNHF 351
+ + ++L ++ F
Sbjct: 181 TMFSMNKLLTKHLF 194
>gi|444316078|ref|XP_004178696.1| hypothetical protein TBLA_0B03360 [Tetrapisispora blattae CBS 6284]
gi|387511736|emb|CCH59177.1| hypothetical protein TBLA_0B03360 [Tetrapisispora blattae CBS 6284]
Length = 232
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 59/81 (72%), Gaps = 2/81 (2%)
Query: 169 GPGGLN-KVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRV 227
G+N K +S +Q +G+ A+PRT++VK++W YI++++LQ+P ++R+IICD+ ++
Sbjct: 122 SSNGINAKNVILSDSMQEFLGEEALPRTQVVKRVWDYIKEHDLQNPKDRRQIICDEKMKP 181
Query: 228 VFETDCTDMFKMNKLLAKHII 248
+F DMF++ K+++K+++
Sbjct: 182 IF-GKSLDMFQLTKVISKNLL 201
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 48/73 (65%), Gaps = 3/73 (4%)
Query: 277 SVIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCES 336
+VI+S+++ +FLG + + + KRVW+YIK + L++P + I+CD K++ + G +S
Sbjct: 130 NVILSDSMQEFLGEEA--LPRTQVVKRVWDYIKEHDLQNPKDRRQIICDEKMKPIFG-KS 186
Query: 337 ISALGIQEMLARN 349
+ + +++++N
Sbjct: 187 LDMFQLTKVISKN 199
>gi|121610030|ref|YP_997837.1| SWIB/MDM2 domain-containing protein [Verminephrobacter eiseniae
EF01-2]
gi|121554670|gb|ABM58819.1| SWIB/MDM2 domain protein [Verminephrobacter eiseniae EF01-2]
Length = 99
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 44/68 (64%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
SP L AVVG +PRT+I+ +LW YIR NNLQD +NK+ I D L+ +F MF++
Sbjct: 31 SPALAAVVGSAPLPRTQIISKLWIYIRANNLQDAANKQNINADAKLKELFGKPQVSMFEL 90
Query: 240 NKLLAKHI 247
L+ KH+
Sbjct: 91 AGLIGKHV 98
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 281 SEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISAL 340
S ALA +G+ + + + ++W YI+ N+L+D N I DAKL+EL G +S
Sbjct: 31 SPALAAVVGSA--PLPRTQIISKLWIYIRANNLQDAANKQNINADAKLKELFGKPQVSMF 88
Query: 341 GIQEMLAR 348
+ ++ +
Sbjct: 89 ELAGLIGK 96
>gi|303323957|ref|XP_003071966.1| SWIB/MDM2 domain containing protein [Coccidioides posadasii C735
delta SOWgp]
gi|240111676|gb|EER29821.1| SWIB/MDM2 domain containing protein [Coccidioides posadasii C735
delta SOWgp]
Length = 216
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 171 GGLNKVCGVSPELQAVV-GQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF 229
GG +K +SP L A+ G+ ++ R + VK++W YI + LQDPS++R+I CD+ +R VF
Sbjct: 134 GGFHKPLNLSPALSALFDGEISLSRPQSVKRIWKYIHDHGLQDPSDRRQIRCDERMRAVF 193
Query: 230 ETDCTDMFKMNKLLAKHII 248
+ D MF M K+L +++
Sbjct: 194 KQDRVHMFTMTKILNQNLY 212
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 31/53 (58%)
Query: 299 EATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNHF 351
++ KR+W+YI + L+DP + I CD ++R + + + + ++L +N +
Sbjct: 160 QSVKRIWKYIHDHGLQDPSDRRQIRCDERMRAVFKQDRVHMFTMTKILNQNLY 212
>gi|346464533|gb|AEO32111.1| hypothetical protein [Amblyomma maculatum]
Length = 211
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 52/93 (55%), Gaps = 6/93 (6%)
Query: 161 PVGAKRRGGPGG------LNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPS 214
PV AK+ G ++ C +S EL AVVG M R+++VK++W+ +R+ NL DPS
Sbjct: 115 PVKAKKAAKSSGTKRESAYSRKCALSAELAAVVGAEQMARSDVVKKMWSIVRERNLFDPS 174
Query: 215 NKRKIICDDALRVVFETDCTDMFKMNKLLAKHI 247
N++ +CD L VF MF M K L HI
Sbjct: 175 NRQFALCDPQLLKVFGQKRVRMFGMMKYLKNHI 207
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 252 PTKESSKRFKPDAESTTEGMESGPSSVIISEALAKFLGTGGREMLQAEATKRVWEYIKVN 311
P KE K K S T+ + +S LA +G +M +++ K++W ++
Sbjct: 111 PKKEPVKAKKAAKSSGTKRESAYSRKCALSAELAAVVG--AEQMARSDVVKKMWSIVRER 168
Query: 312 HLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNHF 351
+L DP N LCD +L ++ G + + G+ + L +NH
Sbjct: 169 NLFDPSNRQFALCDPQLLKVFGQKRVRMFGMMKYL-KNHI 207
>gi|18403898|ref|NP_565810.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]
gi|13877943|gb|AAK44049.1|AF370234_1 unknown protein [Arabidopsis thaliana]
gi|16323472|gb|AAL15230.1| unknown protein [Arabidopsis thaliana]
gi|20197355|gb|AAM15040.1| Expressed protein [Arabidopsis thaliana]
gi|20197527|gb|AAM15113.1| Expressed protein [Arabidopsis thaliana]
gi|21618090|gb|AAM67140.1| unknown [Arabidopsis thaliana]
gi|26451839|dbj|BAC43012.1| unknown protein [Arabidopsis thaliana]
gi|330254033|gb|AEC09127.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]
Length = 109
Score = 71.2 bits (173), Expect = 6e-10, Method: Composition-based stats.
Identities = 37/93 (39%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Query: 155 VAKENPPVGAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPS 214
+AK GAK G+ KV VS L +G+ + RT VK++W YI+ NNLQ+P
Sbjct: 12 MAKAASSTGAKTGRQGTGILKVVPVSKPLANFIGENEVSRTTAVKKIWEYIKLNNLQNPV 71
Query: 215 NKRKIICDDALRVVFE-TDCTDMFKMNKLLAKH 246
NKR+I+CD+ L+ +F D +++KLL++H
Sbjct: 72 NKREILCDEQLKTIFSGKDTVGFLEISKLLSQH 104
Score = 55.8 bits (133), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 53/79 (67%), Gaps = 4/79 (5%)
Query: 278 VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELL-GCES 336
V +S+ LA F+G E+ + A K++WEYIK+N+L++P+N ILCD +L+ + G ++
Sbjct: 34 VPVSKPLANFIGEN--EVSRTTAVKKIWEYIKLNNLQNPVNKREILCDEQLKTIFSGKDT 91
Query: 337 ISALGIQEMLARNHFLRQS 355
+ L I ++L++ HF + +
Sbjct: 92 VGFLEISKLLSQ-HFPKSA 109
>gi|365758907|gb|EHN00728.1| Tri1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 227
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 183 LQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKL 242
L+ +G +PRT++VK +W YI+++NLQ+P+++R+IICD + +F T MF MNKL
Sbjct: 130 LREFLGTEELPRTQVVKMIWQYIKEHNLQNPNDRREIICDKKMEPIFGKKMT-MFSMNKL 188
Query: 243 LAKHI 247
L KH+
Sbjct: 189 LTKHL 193
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 278 VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESI 337
V++S L +FLGT E+ + + K +W+YIK ++L++P + I+CD K+ + G + +
Sbjct: 124 VLLSLPLREFLGT--EELPRTQVVKMIWQYIKEHNLQNPNDRREIICDKKMEPIFG-KKM 180
Query: 338 SALGIQEMLARNHF 351
+ + ++L ++ F
Sbjct: 181 TMFSMNKLLTKHLF 194
>gi|254446854|ref|ZP_05060329.1| SWIB/MDM2 domain superfamily [Verrucomicrobiae bacterium DG1235]
gi|198256279|gb|EDY80588.1| SWIB/MDM2 domain superfamily [Verrucomicrobiae bacterium DG1235]
Length = 77
Score = 71.2 bits (173), Expect = 7e-10, Method: Composition-based stats.
Identities = 35/73 (47%), Positives = 52/73 (71%), Gaps = 3/73 (4%)
Query: 179 VSPE--LQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFE-TDCTD 235
V+P+ L AVVG +PRTE+ K+LW YI+ N+LQ+P NKR+I+ D L+ VF+ D
Sbjct: 4 VTPDAVLSAVVGADPLPRTELTKKLWDYIKSNDLQNPENKREILADAKLKAVFDGKDKVS 63
Query: 236 MFKMNKLLAKHII 248
MF+M KL++ H++
Sbjct: 64 MFEMTKLVSNHVV 76
Score = 41.2 bits (95), Expect = 0.81, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 291 GGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNH 350
G + + E TK++W+YIK N L++P N IL DAKL+ + + ++ L NH
Sbjct: 15 GADPLPRTELTKKLWDYIKSNDLQNPENKREILADAKLKAVFDGKDKVSMFEMTKLVSNH 74
Query: 351 FLR 353
++
Sbjct: 75 VVK 77
>gi|348589734|ref|YP_004874196.1| DNA topoisomerase III [Taylorella asinigenitalis MCE3]
gi|347973638|gb|AEP36173.1| DNA topoisomerase III [Taylorella asinigenitalis MCE3]
gi|399116484|emb|CCG19290.1| conserved hypothetical protein [Taylorella asinigenitalis 14/45]
Length = 97
Score = 71.2 bits (173), Expect = 7e-10, Method: Composition-based stats.
Identities = 33/68 (48%), Positives = 47/68 (69%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
S EL AVVG +PRTE+ K++W YI+ +LQD +N+R I DD LR +F D +MF+M
Sbjct: 29 SKELAAVVGDKPLPRTEVTKKVWEYIKSKDLQDSANRRNINADDKLRPIFGKDQVNMFEM 88
Query: 240 NKLLAKHI 247
KL++ H+
Sbjct: 89 TKLISAHL 96
Score = 39.3 bits (90), Expect = 2.7, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 33/57 (57%)
Query: 291 GGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLA 347
G + + + E TK+VWEYIK L+D N I D KLR + G + ++ + ++++
Sbjct: 37 GDKPLPRTEVTKKVWEYIKSKDLQDSANRRNINADDKLRPIFGKDQVNMFEMTKLIS 93
>gi|445499271|ref|ZP_21466126.1| SWIB/MDM2 domain containing protein [Janthinobacterium sp. HH01]
gi|444789266|gb|ELX10814.1| SWIB/MDM2 domain containing protein [Janthinobacterium sp. HH01]
Length = 130
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDC-TDMFK 238
S L AVVG +PRTE+ K++W YI+K +LQDP+N+R I DD L+ VF MF+
Sbjct: 61 SATLAAVVGATPLPRTEVTKKVWDYIKKLDLQDPANRRMINADDKLKAVFGGKAQVSMFE 120
Query: 239 MNKLLAKHI 247
M KL++ H+
Sbjct: 121 MTKLISDHL 129
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%)
Query: 297 QAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNHF 351
+ E TK+VW+YIK L+DP N +I D KL+ + G ++ ++ L +H
Sbjct: 75 RTEVTKKVWDYIKKLDLQDPANRRMINADDKLKAVFGGKAQVSMFEMTKLISDHL 129
>gi|321459378|gb|EFX70432.1| hypothetical protein DAPPUDRAFT_217355 [Daphnia pulex]
Length = 465
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 47/79 (59%)
Query: 170 PGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF 229
P G K +SPEL ++G +MPR E+VK++W+ I++ NL DP NK+ +CD+ L+ VF
Sbjct: 386 PKGGVKAVKLSPELSDIMGTESMPRPEVVKKMWSIIKERNLYDPKNKQFAVCDEQLQKVF 445
Query: 230 ETDCTDMFKMNKLLAKHII 248
F M K L H I
Sbjct: 446 GVKRFRTFGMMKYLKAHFI 464
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 274 GPSSVIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLG 333
G +V +S L+ +GT M + E K++W IK +L DP N +CD +L+++ G
Sbjct: 389 GVKAVKLSPELSDIMGT--ESMPRPEVVKKMWSIIKERNLYDPKNKQFAVCDEQLQKVFG 446
Query: 334 CESISALGIQEMLARNHFL 352
+ G+ + L + HF+
Sbjct: 447 VKRFRTFGMMKYL-KAHFI 464
>gi|297833030|ref|XP_002884397.1| hypothetical protein ARALYDRAFT_477604 [Arabidopsis lyrata subsp.
lyrata]
gi|297330237|gb|EFH60656.1| hypothetical protein ARALYDRAFT_477604 [Arabidopsis lyrata subsp.
lyrata]
Length = 145
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Query: 172 GLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFE- 230
GL KV VSP L +G RT+ +K +W YI+ ++LQ+P++KR+I CD+ L+++FE
Sbjct: 65 GLFKVTPVSPVLAQFLGTGETTRTDAIKGIWTYIKSHDLQNPADKREIFCDETLKLIFEG 124
Query: 231 TDCTDMFKMNKLLAKHII 248
D +++KLL+ H +
Sbjct: 125 KDKVGFLEISKLLSPHFV 142
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 46/77 (59%), Gaps = 4/77 (5%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELL-GCESIS 338
+S LA+FLGTG E + +A K +W YIK + L++P + I CD L+ + G + +
Sbjct: 72 VSPVLAQFLGTG--ETTRTDAIKGIWTYIKSHDLQNPADKREIFCDETLKLIFEGKDKVG 129
Query: 339 ALGIQEMLARNHFLRQS 355
L I ++L+ HF++ +
Sbjct: 130 FLEISKLLS-PHFVKTA 145
>gi|256423726|ref|YP_003124379.1| SWIB/MDM2 domain-containing protein [Chitinophaga pinensis DSM
2588]
gi|256038634|gb|ACU62178.1| SWIB/MDM2 domain protein [Chitinophaga pinensis DSM 2588]
Length = 106
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 155 VAKENPPVGAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPS 214
AK + GG GL S +L AV+G +PRTEI K++W YI+++NLQD
Sbjct: 12 AAKTTTKAAPAKEGGGKGLKAPLTPSADLAAVIGSDPLPRTEITKKIWDYIKEHNLQDAQ 71
Query: 215 NKRKIICDDALRVVFE-TDCTDMFKMNKLLAKHI 247
NKR I D+ L+ VF D MF++ K + +H+
Sbjct: 72 NKRLINADEKLKKVFNGKDQISMFELAKEMNQHV 105
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 10/86 (11%)
Query: 261 KPDAESTT------EGMESGPSSVII-SEALAKFLGTGGREMLQAEATKRVWEYIKVNHL 313
KP A++TT EG G + + S LA +G+ + + E TK++W+YIK ++L
Sbjct: 10 KPAAKTTTKAAPAKEGGGKGLKAPLTPSADLAAVIGSD--PLPRTEITKKIWDYIKEHNL 67
Query: 314 EDPLNSMVILCDAKLRELL-GCESIS 338
+D N +I D KL+++ G + IS
Sbjct: 68 QDAQNKRLINADEKLKKVFNGKDQIS 93
>gi|187251157|ref|YP_001875639.1| hypothetical protein Emin_0747 [Elusimicrobium minutum Pei191]
gi|186971317|gb|ACC98302.1| hypothetical protein Emin_0747 [Elusimicrobium minutum Pei191]
Length = 84
Score = 70.9 bits (172), Expect = 8e-10, Method: Composition-based stats.
Identities = 34/69 (49%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCT-DMFK 238
S EL A+VG +PRTE+VK++W YI+K+NLQD NKR I DD L+V+F MF+
Sbjct: 15 SAELAAIVGSNPLPRTEVVKKMWDYIKKHNLQDAKNKRMINADDKLKVIFNGKAQISMFE 74
Query: 239 MNKLLAKHI 247
M+K ++ H+
Sbjct: 75 MSKYISSHL 83
>gi|320031348|gb|EFW13318.1| hypothetical protein CPSG_10065 [Coccidioides posadasii str.
Silveira]
Length = 271
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 171 GGLNKVCGVSPELQAVV-GQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF 229
GG +K +SP L A+ G+ ++ R + VK++W YI + LQDPS++R+I CD+ +R VF
Sbjct: 189 GGFHKPLNLSPALSALFDGEISLSRPQSVKRIWKYIHDHGLQDPSDRRQIRCDERMRAVF 248
Query: 230 ETDCTDMFKMNKLLAKHI 247
+ D MF M K+L +++
Sbjct: 249 KQDRVHMFTMTKILNQNL 266
Score = 38.9 bits (89), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 31/53 (58%)
Query: 299 EATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNHF 351
++ KR+W+YI + L+DP + I CD ++R + + + + ++L +N +
Sbjct: 215 QSVKRIWKYIHDHGLQDPSDRRQIRCDERMRAVFKQDRVHMFTMTKILNQNLY 267
>gi|224056218|ref|XP_002298761.1| predicted protein [Populus trichocarpa]
gi|118485810|gb|ABK94753.1| unknown [Populus trichocarpa]
gi|222846019|gb|EEE83566.1| predicted protein [Populus trichocarpa]
Length = 140
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Query: 169 GPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVV 228
P G+ K VSPE+ VG P + RT+++K +WA+I++ NLQDPSNK+ IICD+ L+ +
Sbjct: 59 APSGIMKPKRVSPEMADFVGAPEVSRTQVLKLIWAHIKERNLQDPSNKKNIICDEKLKKI 118
Query: 229 F-ETDCTDMFKMNKLLAKHII 248
F D ++ L++ H +
Sbjct: 119 FPGRDQVGFLEIAGLISPHFL 139
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELL-GCESIS 338
+S +A F+G E+ + + K +W +IK +L+DP N I+CD KL+++ G + +
Sbjct: 69 VSPEMADFVG--APEVSRTQVLKLIWAHIKERNLQDPSNKKNIICDEKLKKIFPGRDQVG 126
Query: 339 ALGIQEMLARNHFLR 353
L I +++ HFL+
Sbjct: 127 FLEIAGLIS-PHFLK 140
>gi|119172780|ref|XP_001238943.1| hypothetical protein CIMG_09965 [Coccidioides immitis RS]
gi|392869149|gb|EAS27629.2| SWIB/MDM2 domain-containing protein [Coccidioides immitis RS]
Length = 271
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 171 GGLNKVCGVSPELQAVV-GQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF 229
GG +K +SP L A+ G+ ++ R + VK++W YI + LQDPS++R+I CD+ +R VF
Sbjct: 189 GGFHKPLNLSPALSALFDGEISLSRPQSVKRIWQYIHDHGLQDPSDRRQIRCDERMRAVF 248
Query: 230 ETDCTDMFKMNKLLAKHI 247
+ D MF M K+L +++
Sbjct: 249 KQDRVHMFTMTKILNQNL 266
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 31/53 (58%)
Query: 299 EATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNHF 351
++ KR+W+YI + L+DP + I CD ++R + + + + ++L +N +
Sbjct: 215 QSVKRIWQYIHDHGLQDPSDRRQIRCDERMRAVFKQDRVHMFTMTKILNQNLY 267
>gi|340789069|ref|YP_004754534.1| hypothetical protein CFU_3888 [Collimonas fungivorans Ter331]
gi|340554336|gb|AEK63711.1| hypothetical protein CFU_3888 [Collimonas fungivorans Ter331]
Length = 216
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDC-TDMFK 238
S L AVVG +PRTE+ K++W YI+K+ LQ+P NKR II D+ L+ VF MF+
Sbjct: 147 SAVLAAVVGATPLPRTEVTKKVWEYIKKHKLQNPENKRNIIADEKLKAVFGGKKEVSMFE 206
Query: 239 MNKLLAKHI 247
M KL++ H+
Sbjct: 207 MTKLISDHL 215
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%)
Query: 290 TGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLG 333
G + + E TK+VWEYIK + L++P N I+ D KL+ + G
Sbjct: 154 VGATPLPRTEVTKKVWEYIKKHKLQNPENKRNIIADEKLKAVFG 197
>gi|302808999|ref|XP_002986193.1| hypothetical protein SELMODRAFT_49450 [Selaginella moellendorffii]
gi|300146052|gb|EFJ12724.1| hypothetical protein SELMODRAFT_49450 [Selaginella moellendorffii]
Length = 71
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 42/53 (79%)
Query: 177 CGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF 229
C +S L+A+VG P PR+++VK LWAYIR++NLQ P +KRKI CD+AL+ VF
Sbjct: 19 CQLSDVLEAIVGIPQAPRSQVVKSLWAYIREHNLQVPEDKRKIKCDEALKKVF 71
>gi|367010370|ref|XP_003679686.1| hypothetical protein TDEL_0B03460 [Torulaspora delbrueckii]
gi|359747344|emb|CCE90475.1| hypothetical protein TDEL_0B03460 [Torulaspora delbrueckii]
Length = 219
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 60/97 (61%), Gaps = 3/97 (3%)
Query: 183 LQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKL 242
L +G+ ++PRT++VK +W YI+KN+LQ+P ++R+I+C+ + +F T MF MNK+
Sbjct: 123 LSNFLGETSLPRTQVVKLVWDYIKKNDLQNPQDRREILCNKEMEPIFGKKMT-MFSMNKI 181
Query: 243 LAKHII-PLEPTKESSKRFKP-DAESTTEGMESGPSS 277
L+K + P E TK K+ P D + SG SS
Sbjct: 182 LSKFLYNPDEVTKTQVKKDSPTDIDRLESDTPSGASS 218
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 278 VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESI 337
V+++E L+ FLG + + + K VW+YIK N L++P + ILC+ ++ + G + +
Sbjct: 117 VMLAEPLSNFLGETS--LPRTQVVKLVWDYIKKNDLQNPQDRREILCNKEMEPIFG-KKM 173
Query: 338 SALGIQEMLAR 348
+ + ++L++
Sbjct: 174 TMFSMNKILSK 184
>gi|332526907|ref|ZP_08403000.1| SWIB/MDM2 domain-containing protein [Rubrivivax benzoatilyticus
JA2]
gi|332111349|gb|EGJ11333.1| SWIB/MDM2 domain-containing protein [Rubrivivax benzoatilyticus
JA2]
Length = 146
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 43/68 (63%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
S L AV+G +PRTEI K++W YI+KN LQD + K I D L+ +FE MF+M
Sbjct: 78 SAALAAVIGDKPLPRTEITKKVWEYIKKNGLQDKAKKTMINADAKLKAIFEKAQVSMFEM 137
Query: 240 NKLLAKHI 247
KL++ H+
Sbjct: 138 TKLISSHL 145
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 281 SEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISAL 340
S ALA +G + + + E TK+VWEYIK N L+D +I DAKL+ + +S
Sbjct: 78 SAALAAVIG--DKPLPRTEITKKVWEYIKKNGLQDKAKKTMINADAKLKAIFEKAQVSMF 135
Query: 341 GIQEMLA 347
+ ++++
Sbjct: 136 EMTKLIS 142
>gi|295662533|ref|XP_002791820.1| SWIB/MDM2 domain-containing protein [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226279472|gb|EEH35038.1| SWIB/MDM2 domain-containing protein [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 227
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 52/80 (65%), Gaps = 3/80 (3%)
Query: 171 GGLNKVCGVSPELQAVVG---QPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRV 227
GG +K +SP L A++G + R + VK++W YIR+ +LQDP+++R+I CD +R
Sbjct: 143 GGFHKPLTLSPTLSALLGGEITTKLSRPQTVKKVWQYIREKDLQDPADRRQIRCDGLMRA 202
Query: 228 VFETDCTDMFKMNKLLAKHI 247
VF+ D MF M K+L +++
Sbjct: 203 VFKQDRIHMFTMTKILNQNL 222
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Query: 261 KPDAESTTEGMESGP--SSVIISEALAKFLGTG-GREMLQAEATKRVWEYIKVNHLEDPL 317
+PD+ES E +G + +S L+ LG ++ + + K+VW+YI+ L+DP
Sbjct: 130 EPDSESKKEVTRTGGFHKPLTLSPTLSALLGGEITTKLSRPQTVKKVWQYIREKDLQDPA 189
Query: 318 NSMVILCDAKLRELLGCESISALGIQEMLARNHF 351
+ I CD +R + + I + ++L +N +
Sbjct: 190 DRRQIRCDGLMRAVFKQDRIHMFTMTKILNQNLY 223
>gi|320581209|gb|EFW95430.1| RNA polymerase I transcription factor subunit, putative [Ogataea
parapolymorpha DL-1]
Length = 205
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 44/57 (77%), Gaps = 1/57 (1%)
Query: 192 MPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHII 248
+ RT++VK++W Y++ N LQ+P+++R+I+CDD LR VF D +MF MNK+L KH+
Sbjct: 140 IARTQVVKKIWEYVKANELQNPNDRREILCDDKLRPVF-GDKVNMFTMNKVLVKHLF 195
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 70/117 (59%), Gaps = 10/117 (8%)
Query: 238 KMNKLLAKHIIPLEPTKESSKRFKP-DAESTTEGMESGPSS--VIISEALAKFLGTGGRE 294
++N+LL K + TK++ K P +A S+T S P + V+ SEALA+FLG+
Sbjct: 86 RLNQLLKKKDVQ-RVTKKARKSSTPQEASSST----SNPLTRGVLPSEALAQFLGSS-EP 139
Query: 295 MLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNHF 351
+ + + K++WEY+K N L++P + ILCD KLR + G + ++ + ++L ++ F
Sbjct: 140 IARTQVVKKIWEYVKANELQNPNDRREILCDDKLRPVFG-DKVNMFTMNKVLVKHLF 195
>gi|225678200|gb|EEH16484.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 227
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 52/80 (65%), Gaps = 3/80 (3%)
Query: 171 GGLNKVCGVSPELQAVVG---QPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRV 227
GG +K +SP L A++G + R + VK++W YIR+ +LQDP+++R+I CD +R
Sbjct: 143 GGFHKPLTLSPTLSALLGGEITTKLSRPQTVKKVWQYIREKDLQDPADRRQIRCDGLMRA 202
Query: 228 VFETDCTDMFKMNKLLAKHI 247
VF+ D MF M K+L +++
Sbjct: 203 VFKQDRIHMFTMTKILNQNL 222
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query: 261 KPDAESTTEGMESGP--SSVIISEALAKFLGTG-GREMLQAEATKRVWEYIKVNHLEDPL 317
+PD ES E +G + +S L+ LG ++ + + K+VW+YI+ L+DP
Sbjct: 130 EPDLESKKEVTRTGGFHKPLTLSPTLSALLGGEITTKLSRPQTVKKVWQYIREKDLQDPA 189
Query: 318 NSMVILCDAKLRELLGCESISALGIQEMLARNHF 351
+ I CD +R + + I + ++L +N +
Sbjct: 190 DRRQIRCDGLMRAVFKQDRIHMFTMTKILNQNLY 223
>gi|94496660|ref|ZP_01303236.1| hypothetical protein SKA58_18187 [Sphingomonas sp. SKA58]
gi|94424020|gb|EAT09045.1| hypothetical protein SKA58_18187 [Sphingomonas sp. SKA58]
Length = 113
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 46/68 (67%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
SPEL +VG +PR+E+V ++W YI+K++LQD ++R+I D L +F MF+M
Sbjct: 41 SPELAEIVGDKDLPRSEVVSKVWDYIKKHDLQDAKDRRQINADAKLEKIFGKKSVSMFEM 100
Query: 240 NKLLAKHI 247
NK L++H+
Sbjct: 101 NKHLSQHL 108
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 37/59 (62%)
Query: 291 GGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARN 349
G +++ ++E +VW+YIK + L+D + I DAKL ++ G +S+S + + L+++
Sbjct: 49 GDKDLPRSEVVSKVWDYIKKHDLQDAKDRRQINADAKLEKIFGKKSVSMFEMNKHLSQH 107
>gi|33667910|gb|AAQ24534.1| SWIb domain-containing protein [Solanum chacoense]
Length = 148
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFE-TDCTDMF 237
+SP LQ VG + RT+ VK++W YI+ NNLQ+P+NK++I CDD L+ +F D
Sbjct: 75 ISPALQKFVGTSEISRTDAVKKIWDYIKTNNLQNPANKKEINCDDMLKTIFAGKDKVGFL 134
Query: 238 KMNKLLAKHI 247
++ KLL+ H
Sbjct: 135 EIAKLLSFHF 144
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%), Gaps = 4/77 (5%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELL-GCESIS 338
IS AL KF+GT E+ + +A K++W+YIK N+L++P N I CD L+ + G + +
Sbjct: 75 ISPALQKFVGTS--EISRTDAVKKIWDYIKTNNLQNPANKKEINCDDMLKTIFAGKDKVG 132
Query: 339 ALGIQEMLARNHFLRQS 355
L I ++L+ HF + S
Sbjct: 133 FLEIAKLLSF-HFQKAS 148
>gi|302306522|ref|NP_982932.2| ABL015Cp [Ashbya gossypii ATCC 10895]
gi|299788556|gb|AAS50756.2| ABL015Cp [Ashbya gossypii ATCC 10895]
gi|374106135|gb|AEY95045.1| FABL015Cp [Ashbya gossypii FDAG1]
Length = 204
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+S LQ ++G+ +PRT++VK +W YI+++ LQ+P ++R+I+CD A+ VF T MF
Sbjct: 113 LSEPLQRLLGEEQLPRTQVVKAVWDYIKQHQLQNPDDRREILCDAAMEPVFGKKMT-MFS 171
Query: 239 MNKLLAKHI 247
MNK+L++H+
Sbjct: 172 MNKILSQHL 180
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 278 VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLG 333
V +SE L + LG ++ + + K VW+YIK + L++P + ILCDA + + G
Sbjct: 111 VQLSEPLQRLLGE--EQLPRTQVVKAVWDYIKQHQLQNPDDRREILCDAAMEPVFG 164
>gi|18396594|ref|NP_566210.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]
gi|6091763|gb|AAF03473.1|AC009327_12 hypothetical protein [Arabidopsis thaliana]
gi|26450613|dbj|BAC42418.1| unknown protein [Arabidopsis thaliana]
gi|28372894|gb|AAO39929.1| At3g03590 [Arabidopsis thaliana]
gi|332640439|gb|AEE73960.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]
Length = 143
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Query: 172 GLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFE- 230
G+ KV VSP L +G RT+ +K +W YI+ ++LQ+P++KR+I CD+ L+++FE
Sbjct: 63 GIFKVTPVSPVLAQFLGTGETSRTDAIKGIWTYIKSHDLQNPADKREIFCDETLKLIFEG 122
Query: 231 TDCTDMFKMNKLLAKHII 248
D +++KLL+ H +
Sbjct: 123 KDKVGFLEISKLLSPHFV 140
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 46/77 (59%), Gaps = 4/77 (5%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELL-GCESIS 338
+S LA+FLGTG E + +A K +W YIK + L++P + I CD L+ + G + +
Sbjct: 70 VSPVLAQFLGTG--ETSRTDAIKGIWTYIKSHDLQNPADKREIFCDETLKLIFEGKDKVG 127
Query: 339 ALGIQEMLARNHFLRQS 355
L I ++L+ HF++ +
Sbjct: 128 FLEISKLLS-PHFVKTA 143
>gi|21593643|gb|AAM65610.1| unknown [Arabidopsis thaliana]
Length = 143
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Query: 172 GLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFE- 230
G+ KV VSP L +G RT+ +K +W YI+ ++LQ+P++KR+I CD+ L+++FE
Sbjct: 63 GIFKVTPVSPVLAQFLGTGETSRTDAIKGIWTYIKSHDLQNPADKREIFCDETLKLIFEG 122
Query: 231 TDCTDMFKMNKLLAKHII 248
D +++KLL+ H +
Sbjct: 123 KDKVGFLEISKLLSPHFV 140
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 46/77 (59%), Gaps = 4/77 (5%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELL-GCESIS 338
+S LA+FLGTG E + +A K +W YIK + L++P + I CD L+ + G + +
Sbjct: 70 VSPVLAQFLGTG--ETSRTDAIKGIWTYIKSHDLQNPADKREIFCDETLKLIFEGKDKVG 127
Query: 339 ALGIQEMLARNHFLRQS 355
L I ++L+ HF++ +
Sbjct: 128 FLEISKLLS-PHFVKTA 143
>gi|297823353|ref|XP_002879559.1| SWIB complex BAF60b domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325398|gb|EFH55818.1| SWIB complex BAF60b domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 112
Score = 69.7 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/76 (42%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 172 GLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFE- 230
G+ KV VS L +G+ + RT VK++W YI+ NNLQ+P NKR+I+CD+ L+ +F
Sbjct: 32 GILKVVPVSKPLATFIGENEVSRTTAVKKIWEYIKLNNLQNPENKREILCDEQLKTIFSG 91
Query: 231 TDCTDMFKMNKLLAKH 246
D +++KLL++H
Sbjct: 92 KDTVGFLEISKLLSQH 107
Score = 54.3 bits (129), Expect = 9e-05, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 52/79 (65%), Gaps = 4/79 (5%)
Query: 278 VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELL-GCES 336
V +S+ LA F+G E+ + A K++WEYIK+N+L++P N ILCD +L+ + G ++
Sbjct: 37 VPVSKPLATFIGEN--EVSRTTAVKKIWEYIKLNNLQNPENKREILCDEQLKTIFSGKDT 94
Query: 337 ISALGIQEMLARNHFLRQS 355
+ L I ++L++ HF + +
Sbjct: 95 VGFLEISKLLSQ-HFPKSA 112
>gi|338733782|ref|YP_004672255.1| hypothetical protein SNE_A18870 [Simkania negevensis Z]
gi|336483165|emb|CCB89764.1| putative uncharacterized protein [Simkania negevensis Z]
Length = 76
Score = 69.7 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/70 (52%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFET-DCTDMF 237
+S EL VVG+ MPRTE+ K+LWAYI+KN QDP NKR II D+ L VF + +MF
Sbjct: 6 ISTELAEVVGKGPMPRTEVTKKLWAYIKKNKRQDPDNKRNIIPDEKLAKVFGSKKAINMF 65
Query: 238 KMNKLLAKHI 247
M K + KH+
Sbjct: 66 DMTKKVNKHL 75
Score = 38.9 bits (89), Expect = 3.3, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLG 333
IS LA+ +G G M + E TK++W YIK N +DP N I+ D KL ++ G
Sbjct: 6 ISTELAEVVGKG--PMPRTEVTKKLWAYIKKNKRQDPDNKRNIIPDEKLAKVFG 57
>gi|406987979|gb|EKE08139.1| hypothetical protein ACD_17C00325G0001 [uncultured bacterium]
Length = 86
Score = 69.7 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/69 (53%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFET-DCTDMFK 238
S EL AVVG MPRTE+ K+LWAYI+KN+LQD N+R I D+ L +F T +MF+
Sbjct: 17 SKELAAVVGDGPMPRTEVTKKLWAYIKKNDLQDAKNRRNINPDEKLGKIFGTKKAVNMFE 76
Query: 239 MNKLLAKHI 247
M KL+ KH+
Sbjct: 77 MTKLVNKHL 85
>gi|398835468|ref|ZP_10592830.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Herbaspirillum sp. YR522]
gi|398216254|gb|EJN02807.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Herbaspirillum sp. YR522]
Length = 157
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDC-TDMFK 238
S L VVG +PRTE+ K++W YI+K+NLQ+P NKR I DD L+ +F MF+
Sbjct: 88 SAALGEVVGAKPLPRTEVTKKVWEYIKKHNLQNPENKRNIDADDKLKAIFGGKKQVTMFE 147
Query: 239 MNKLLAKHI 247
M KL++ H+
Sbjct: 148 MTKLISAHL 156
Score = 41.6 bits (96), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 291 GGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLG 333
G + + + E TK+VWEYIK ++L++P N I D KL+ + G
Sbjct: 96 GAKPLPRTEVTKKVWEYIKKHNLQNPENKRNIDADDKLKAIFG 138
>gi|399018413|ref|ZP_10720592.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Herbaspirillum sp. CF444]
gi|398101529|gb|EJL91745.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Herbaspirillum sp. CF444]
Length = 152
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF-ETDCTDMFK 238
S L VVG +PRTE+ K++W YI+K+ LQ+P NKR I DD L+VVF MF+
Sbjct: 83 SAALAEVVGAKPLPRTEVTKKVWEYIKKHKLQNPENKRNIDADDKLKVVFGGKKQVSMFE 142
Query: 239 MNKLLAKHI 247
M KL++ H+
Sbjct: 143 MTKLISGHL 151
Score = 41.2 bits (95), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 281 SEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLG 333
S ALA+ +G + + + E TK+VWEYIK + L++P N I D KL+ + G
Sbjct: 83 SAALAEVVG--AKPLPRTEVTKKVWEYIKKHKLQNPENKRNIDADDKLKVVFG 133
>gi|332531178|ref|ZP_08407091.1| DNA topoisomerase III [Hylemonella gracilis ATCC 19624]
gi|332039285|gb|EGI75698.1| DNA topoisomerase III [Hylemonella gracilis ATCC 19624]
Length = 968
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 44/68 (64%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
S EL AV+G + RTE++K++W YI+ LQDP +KR ++ D L+ VF D MF++
Sbjct: 900 SAELAAVIGSEPVARTEVIKKIWDYIKAQGLQDPKDKRSVLADAKLQPVFGKDRVTMFEI 959
Query: 240 NKLLAKHI 247
L+ KH+
Sbjct: 960 TGLVGKHL 967
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 34/59 (57%)
Query: 291 GGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARN 349
G + + E K++W+YIK L+DP + +L DAKL+ + G + ++ I ++ ++
Sbjct: 908 GSEPVARTEVIKKIWDYIKAQGLQDPKDKRSVLADAKLQPVFGKDRVTMFEITGLVGKH 966
>gi|367003327|ref|XP_003686397.1| hypothetical protein TPHA_0G01260 [Tetrapisispora phaffii CBS 4417]
gi|357524698|emb|CCE63963.1| hypothetical protein TPHA_0G01260 [Tetrapisispora phaffii CBS 4417]
Length = 255
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 183 LQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKL 242
LQ ++G +PRT++VKQ+W YI+++NLQ+ ++R+I+CD+ ++ VF T MF++NK+
Sbjct: 128 LQELLGAEELPRTQVVKQVWDYIKEHNLQNAKDRREILCDEKMKPVFGKKMT-MFQLNKI 186
Query: 243 LAKHIIPLE 251
L H+ E
Sbjct: 187 LVNHLFNKE 195
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 46/77 (59%), Gaps = 4/77 (5%)
Query: 278 VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESI 337
V++S+ L + LG E+ + + K+VW+YIK ++L++ + ILCD K++ + G + +
Sbjct: 122 VLLSKPLQELLG--AEELPRTQVVKQVWDYIKEHNLQNAKDRREILCDEKMKPVFG-KKM 178
Query: 338 SALGIQEMLARNHFLRQ 354
+ + ++L NH +
Sbjct: 179 TMFQLNKILV-NHLFNK 194
>gi|169601186|ref|XP_001794015.1| hypothetical protein SNOG_03451 [Phaeosphaeria nodorum SN15]
gi|160705881|gb|EAT88656.2| hypothetical protein SNOG_03451 [Phaeosphaeria nodorum SN15]
Length = 275
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 45/60 (75%)
Query: 192 MPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLE 251
+ R + VK++W Y+++ +LQDP++KR+I CDDA+R VF+ D MF MNK+L +++ ++
Sbjct: 199 LSRPQTVKKIWEYVKQRDLQDPADKRQIRCDDAMRAVFKQDRVHMFTMNKILNQNLYAVD 258
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 33/61 (54%)
Query: 291 GGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNH 350
GG + + + K++WEY+K L+DP + I CD +R + + + + ++L +N
Sbjct: 195 GGFHLSRPQTVKKIWEYVKQRDLQDPADKRQIRCDDAMRAVFKQDRVHMFTMNKILNQNL 254
Query: 351 F 351
+
Sbjct: 255 Y 255
>gi|406933255|gb|EKD67963.1| hypothetical protein ACD_48C00134G0001 [uncultured bacterium]
Length = 90
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 55/84 (65%), Gaps = 4/84 (4%)
Query: 166 RRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDAL 225
R+ P L K +SPEL AV+G + R +++K+LW YI+ NLQ+PSNKR II D+ L
Sbjct: 3 RKANPA-LMKPLTLSPELAAVIGAGPLARGQVMKKLWEYIKGKNLQNPSNKRNIIADELL 61
Query: 226 RVVF--ETDCTDMFKMNKLLAKHI 247
+F + + T MF+M KL++ H+
Sbjct: 62 LPLFGGKKEVT-MFEMTKLVSAHL 84
>gi|239938969|gb|ACS36127.1| SWIB domain-containing protein [Tigriopus japonicus]
Length = 85
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 45/76 (59%)
Query: 172 GLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFET 231
GL K +SPEL VVG+ R+E +KQLWAYI+K+NLQDP NK+ D + VF
Sbjct: 10 GLTKPMKLSPELAEVVGKKEASRSECIKQLWAYIKKHNLQDPENKQFFKPDKKMAKVFGE 69
Query: 232 DCTDMFKMNKLLAKHI 247
+ F M K + H+
Sbjct: 70 EKIRAFSMAKFIGAHL 85
Score = 40.8 bits (94), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 32/58 (55%)
Query: 290 TGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLA 347
G +E ++E K++W YIK ++L+DP N D K+ ++ G E I A + + +
Sbjct: 25 VGKKEASRSECIKQLWAYIKKHNLQDPENKQFFKPDKKMAKVFGEEKIRAFSMAKFIG 82
>gi|115905855|ref|XP_001200842.1| PREDICTED: uncharacterized protein LOC764515 [Strongylocentrotus
purpuratus]
Length = 293
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 46/85 (54%)
Query: 163 GAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICD 222
GA + G G +SPEL ++G M R E+VK++WA +++ NL DP NK+ ICD
Sbjct: 199 GASKDKGKTGYVADMILSPELANIIGAERMSRHEVVKRMWAIVKERNLMDPKNKQYHICD 258
Query: 223 DALRVVFETDCTDMFKMNKLLAKHI 247
D L VF F M K L HI
Sbjct: 259 DELLRVFGQRRIRTFSMMKYLKGHI 283
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 4/94 (4%)
Query: 253 TKESSKRFKPDAESTTEGMESGPSSVIISEALAKFLGTGGREMLQAEATKRVWEYIKVNH 312
+K +SK K + S +G + +I+S LA +G M + E KR+W +K +
Sbjct: 190 SKSTSK--KANGASKDKGKTGYVADMILSPELANIIG--AERMSRHEVVKRMWAIVKERN 245
Query: 313 LEDPLNSMVILCDAKLRELLGCESISALGIQEML 346
L DP N +CD +L + G I + + L
Sbjct: 246 LMDPKNKQYHICDDELLRVFGQRRIRTFSMMKYL 279
>gi|46445959|ref|YP_007324.1| hypothetical protein pc0325 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46399600|emb|CAF23049.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 98
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETD-CTDMF 237
VS L +VG MPRTE+ K++W YI+KN LQD +NKR I D L V +D DMF
Sbjct: 19 VSEVLAEIVGNGPMPRTEVTKRVWDYIKKNKLQDQTNKRNINPDAKLGKVLGSDQSIDMF 78
Query: 238 KMNKLLAKHIIPLEPTKESSKR 259
KM +AKH+ EP S+K+
Sbjct: 79 KMTSKIAKHL--KEPEMSSTKQ 98
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 278 VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCE-S 336
V +SE LA+ +G G M + E TKRVW+YIK N L+D N I DAKL ++LG + S
Sbjct: 17 VQVSEVLAEIVGNG--PMPRTEVTKRVWDYIKKNKLQDQTNKRNINPDAKLGKVLGSDQS 74
Query: 337 ISALGIQEMLAR 348
I + +A+
Sbjct: 75 IDMFKMTSKIAK 86
>gi|383453556|ref|YP_005367545.1| DNA topoisomerase domain-containing protein [Corallococcus
coralloides DSM 2259]
gi|380728134|gb|AFE04136.1| DNA topoisomerase domain-containing protein [Corallococcus
coralloides DSM 2259]
Length = 110
Score = 68.9 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/69 (49%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF-ETDCTDMFK 238
S EL A+VG A+PRT +V ++W YI+KNNLQD NKR+I DD L+ +F MF+
Sbjct: 41 SAELAAIVGSKALPRTAVVSKIWDYIKKNNLQDAKNKRQINADDKLKPIFGGKKNVTMFE 100
Query: 239 MNKLLAKHI 247
M L+ KH+
Sbjct: 101 MTALVNKHL 109
>gi|224103703|ref|XP_002313162.1| predicted protein [Populus trichocarpa]
gi|222849570|gb|EEE87117.1| predicted protein [Populus trichocarpa]
Length = 141
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Query: 169 GPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVV 228
P G+ K VSPE+ +G P + RT+ +K +WA+I+++NLQDPSNK+ IICD+ L+ +
Sbjct: 60 APRGIMKPRRVSPEMADFIGAPEVSRTQALKLIWAHIKEHNLQDPSNKKNIICDEKLKKI 119
Query: 229 FE-TDCTDMFKMNKLLAKHII 248
F D ++ L++ H +
Sbjct: 120 FAGRDQVGFLEIAGLISPHFL 140
Score = 44.3 bits (103), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 46/75 (61%), Gaps = 4/75 (5%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELL-GCESIS 338
+S +A F+G E+ + +A K +W +IK ++L+DP N I+CD KL+++ G + +
Sbjct: 70 VSPEMADFIG--APEVSRTQALKLIWAHIKEHNLQDPSNKKNIICDEKLKKIFAGRDQVG 127
Query: 339 ALGIQEMLARNHFLR 353
L I +++ HFL+
Sbjct: 128 FLEIAGLIS-PHFLK 141
>gi|383760487|ref|YP_005439473.1| SWIB/MDM2 domain-containing protein [Rubrivivax gelatinosus IL144]
gi|381381157|dbj|BAL97974.1| SWIB/MDM2 domain protein [Rubrivivax gelatinosus IL144]
Length = 147
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 43/68 (63%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
S L AV+G +PRTEI K++W YI+KN LQD + K I D L+ +F+ MF+M
Sbjct: 79 SAALAAVIGDKPLPRTEITKKVWEYIKKNGLQDKAKKTMINADAKLKAIFDKAQVSMFEM 138
Query: 240 NKLLAKHI 247
KL++ H+
Sbjct: 139 TKLISSHL 146
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 281 SEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISAL 340
S ALA +G + + + E TK+VWEYIK N L+D +I DAKL+ + +S
Sbjct: 79 SAALAAVIG--DKPLPRTEITKKVWEYIKKNGLQDKAKKTMINADAKLKAIFDKAQVSMF 136
Query: 341 GIQEMLA 347
+ ++++
Sbjct: 137 EMTKLIS 143
>gi|388570247|ref|ZP_10156606.1| DNA topoisomerase III [Hydrogenophaga sp. PBC]
gi|388262529|gb|EIK88160.1| DNA topoisomerase III [Hydrogenophaga sp. PBC]
Length = 980
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 44/68 (64%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
S L AV+G+ + R E+VK+LW YI+ N LQDP++KR++ D LR VF D MF++
Sbjct: 912 SAALAAVIGEGPVSRPEVVKKLWDYIKANGLQDPADKRRVNADAKLRPVFGKDAVTMFEI 971
Query: 240 NKLLAKHI 247
L+ H+
Sbjct: 972 AGLVGHHL 979
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 281 SEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISAL 340
S ALA +G G + + E K++W+YIK N L+DP + + DAKLR + G ++++
Sbjct: 912 SAALAAVIGEG--PVSRPEVVKKLWDYIKANGLQDPADKRRVNADAKLRPVFGKDAVTMF 969
Query: 341 GIQEMLA 347
I ++
Sbjct: 970 EIAGLVG 976
>gi|240273373|gb|EER36894.1| SWIB/MDM2 domain-containing protein [Ajellomyces capsulatus H143]
Length = 292
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 43/60 (71%)
Query: 192 MPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLE 251
+ R + VK++W YIR+NNLQDP+++R+I CDD +R VF+ D MF M K+L ++ L+
Sbjct: 232 LSRPQAVKKVWQYIRENNLQDPADRRQIRCDDLMRAVFKQDRIHMFTMTKILNHNLYNLD 291
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 31/53 (58%)
Query: 299 EATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNHF 351
+A K+VW+YI+ N+L+DP + I CD +R + + I + ++L N +
Sbjct: 236 QAVKKVWQYIRENNLQDPADRRQIRCDDLMRAVFKQDRIHMFTMTKILNHNLY 288
>gi|154280751|ref|XP_001541188.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150411367|gb|EDN06755.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 263
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 43/60 (71%)
Query: 192 MPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLE 251
+ R + VK++W YIR+NNLQDP+++R+I CDD +R VF+ D MF M K+L ++ L+
Sbjct: 203 LSRPQAVKKVWQYIRENNLQDPADRRQIRCDDLMRAVFKQDRIHMFTMTKILNHNLYNLD 262
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 40/71 (56%)
Query: 281 SEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISAL 340
SE+ + TGG + + +A K+VW+YI+ N+L+DP + I CD +R + + I
Sbjct: 189 SESKKEVTRTGGFHLSRPQAVKKVWQYIRENNLQDPADRRQIRCDDLMRAVFKQDRIHMF 248
Query: 341 GIQEMLARNHF 351
+ ++L N +
Sbjct: 249 TMTKILNHNLY 259
>gi|225558134|gb|EEH06419.1| SWIB/MDM2 domain-containing protein [Ajellomyces capsulatus G186AR]
Length = 263
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 43/60 (71%)
Query: 192 MPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLE 251
+ R + VK++W YIR+NNLQDP+++R+I CDD +R VF+ D MF M K+L ++ L+
Sbjct: 203 LSRPQAVKKVWQYIRENNLQDPADRRQIRCDDLMRAVFKQDRIHMFTMTKILNHNLYNLD 262
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 40/71 (56%)
Query: 281 SEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISAL 340
SE+ + TGG + + +A K+VW+YI+ N+L+DP + I CD +R + + I
Sbjct: 189 SESKKEVTRTGGFHLSRPQAVKKVWQYIRENNLQDPADRRQIRCDDLMRAVFKQDRIHMF 248
Query: 341 GIQEMLARNHF 351
+ ++L N +
Sbjct: 249 TMTKILNHNLY 259
>gi|337281415|ref|YP_004620887.1| type IA DNA topoisomerase [Ramlibacter tataouinensis TTB310]
gi|334732492|gb|AEG94868.1| Candidate type IA DNA topoisomerase [Ramlibacter tataouinensis
TTB310]
Length = 989
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 48/82 (58%), Gaps = 5/82 (6%)
Query: 166 RRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDAL 225
R+ GPG SP+L AVVG + RTE++K+LW YI+ N LQD +NKR I D L
Sbjct: 912 RKTGPG-----LTPSPQLAAVVGAEPVARTEVIKKLWDYIKANGLQDAANKRAINADAKL 966
Query: 226 RVVFETDCTDMFKMNKLLAKHI 247
VF MF++ ++ KH+
Sbjct: 967 AAVFGKPQVTMFELAGIVGKHL 988
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 24/44 (54%)
Query: 290 TGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLG 333
G + + E K++W+YIK N L+D N I DAKL + G
Sbjct: 928 VGAEPVARTEVIKKLWDYIKANGLQDAANKRAINADAKLAAVFG 971
>gi|242085638|ref|XP_002443244.1| hypothetical protein SORBIDRAFT_08g016260 [Sorghum bicolor]
gi|241943937|gb|EES17082.1| hypothetical protein SORBIDRAFT_08g016260 [Sorghum bicolor]
Length = 147
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 51/78 (65%), Gaps = 2/78 (2%)
Query: 172 GLNKVCGVSPELQAVVG-QPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFE 230
G+ K +SPEL+ VG P +PRTE +K +WA+I+ NNLQDP++K+ IICDD L+ +F
Sbjct: 68 GITKPKPISPELREFVGGAPELPRTEAIKLVWAHIKGNNLQDPNDKKIIICDDKLKKIFG 127
Query: 231 T-DCTDMFKMNKLLAKHI 247
D +++ LL H
Sbjct: 128 GRDRVGFLEISGLLNPHF 145
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLG 333
IS L +F+G G E+ + EA K VW +IK N+L+DP + +I+CD KL+++ G
Sbjct: 75 ISPELREFVG-GAPELPRTEAIKLVWAHIKGNNLQDPNDKKIIICDDKLKKIFG 127
>gi|388570208|ref|ZP_10156568.1| hypothetical protein Q5W_4925 [Hydrogenophaga sp. PBC]
gi|388262590|gb|EIK88220.1| hypothetical protein Q5W_4925 [Hydrogenophaga sp. PBC]
Length = 160
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 43/68 (63%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
S L A+VG +PRTE+ K++W YI+KN LQD NKR I D L+ +F+ MF+M
Sbjct: 92 SAALAAIVGSNPLPRTEVTKKVWDYIKKNKLQDSVNKRMINADAKLKEIFKKAQASMFEM 151
Query: 240 NKLLAKHI 247
KL+ H+
Sbjct: 152 TKLVNDHL 159
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Query: 281 SEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELL 332
S ALA +G+ + + E TK+VW+YIK N L+D +N +I DAKL+E+
Sbjct: 92 SAALAAIVGSN--PLPRTEVTKKVWDYIKKNKLQDSVNKRMINADAKLKEIF 141
>gi|242796038|ref|XP_002482715.1| SWIB/MDM2 domain protein [Talaromyces stipitatus ATCC 10500]
gi|218719303|gb|EED18723.1| SWIB/MDM2 domain protein [Talaromyces stipitatus ATCC 10500]
Length = 298
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 59/105 (56%), Gaps = 19/105 (18%)
Query: 162 VGAKRR-GGPGGLNKVCGVSPELQAVV-GQPA-----------------MPRTEIVKQLW 202
GAK+ GG +K +SP L ++ G+ A + R + VK++W
Sbjct: 189 TGAKKEVNRSGGFHKPLNLSPALSELLDGEVAVSSQVRYYMLDSTDTKKLSRPQTVKRVW 248
Query: 203 AYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHI 247
YI+ N+LQDPS++R+I CDD +R+VF+ D MF M K+L +++
Sbjct: 249 EYIKANDLQDPSDRRQIRCDDRMRLVFKQDRVHMFTMTKILNQNL 293
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 278 VIISEALAKFL--GTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCE 335
V +S + ++ T +++ + + KRVWEYIK N L+DP + I CD ++R + +
Sbjct: 219 VAVSSQVRYYMLDSTDTKKLSRPQTVKRVWEYIKANDLQDPSDRRQIRCDDRMRLVFKQD 278
Query: 336 SISALGIQEMLARNHF 351
+ + ++L +N +
Sbjct: 279 RVHMFTMTKILNQNLY 294
>gi|427400619|ref|ZP_18891857.1| hypothetical protein HMPREF9710_01453 [Massilia timonae CCUG 45783]
gi|425720444|gb|EKU83366.1| hypothetical protein HMPREF9710_01453 [Massilia timonae CCUG 45783]
Length = 126
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDC-TDMFK 238
S L AVVG +PRTE+ K++W YI+ +LQD +N+R I DD L+ VF MF+
Sbjct: 57 SATLAAVVGDKPLPRTEVTKKVWDYIKSKDLQDAANRRMINADDKLKAVFGGKAQVSMFE 116
Query: 239 MNKLLAKHI 247
M KL++ H+
Sbjct: 117 MTKLISDHL 125
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 290 TGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCES 336
G + + + E TK+VW+YIK L+D N +I D KL+ + G ++
Sbjct: 64 VGDKPLPRTEVTKKVWDYIKSKDLQDAANRRMINADDKLKAVFGGKA 110
>gi|223944301|gb|ACN26234.1| unknown [Zea mays]
Length = 70
Score = 68.2 bits (165), Expect = 6e-09, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 44/59 (74%)
Query: 188 GQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKH 246
G+ + R+++VK++W YI++NNLQDPS++RKIICD+ L+ + + F ++KLLA H
Sbjct: 7 GESMLSRSDVVKRMWDYIKENNLQDPSDRRKIICDEKLKDLLGVETFTGFTVSKLLAPH 65
Score = 65.5 bits (158), Expect = 4e-08, Method: Composition-based stats.
Identities = 28/68 (41%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 286 KFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEM 345
KF+GTG + +++ KR+W+YIK N+L+DP + I+CD KL++LLG E+ + + ++
Sbjct: 2 KFIGTGESMLSRSDVVKRMWDYIKENNLQDPSDRRKIICDEKLKDLLGVETFTGFTVSKL 61
Query: 346 LARNHFLR 353
LA HF +
Sbjct: 62 LA-PHFTK 68
>gi|149243917|ref|XP_001526546.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146448940|gb|EDK43196.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 141
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 166 RRGGPG-GLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDA 224
+R P N+ +S +LQ V+ + R ++VK+LWAYI+ NNLQ+P++KR+IICDD
Sbjct: 60 KRAAPNNAFNREMVLSSDLQNVISELTCSRPQVVKRLWAYIKDNNLQNPTDKRQIICDDK 119
Query: 225 LRVVFE 230
L+ +F+
Sbjct: 120 LQQLFK 125
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 27/43 (62%)
Query: 299 EATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALG 341
+ KR+W YIK N+L++P + I+CD KL++L S LG
Sbjct: 91 QVVKRLWAYIKDNNLQNPTDKRQIICDDKLQQLFKKSMFSTLG 133
>gi|319796553|ref|YP_004158193.1| DNA topoisomerase iii [Variovorax paradoxus EPS]
gi|315599016|gb|ADU40082.1| DNA topoisomerase III [Variovorax paradoxus EPS]
Length = 989
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 43/68 (63%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
S L AV+G + RTE++K+LW YI+ N LQD +NKR I D L+ VF D MF++
Sbjct: 916 SDSLAAVIGTEPVARTEVIKKLWDYIKANGLQDATNKRAINADAKLKPVFGKDQVTMFEL 975
Query: 240 NKLLAKHI 247
++ KH+
Sbjct: 976 AGIVGKHL 983
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 281 SEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISAL 340
S++LA +GT + + E K++W+YIK N L+D N I DAKL+ + G + ++
Sbjct: 916 SDSLAAVIGT--EPVARTEVIKKLWDYIKANGLQDATNKRAINADAKLKPVFGKDQVTMF 973
Query: 341 GIQEMLARN 349
+ ++ ++
Sbjct: 974 ELAGIVGKH 982
>gi|170581774|ref|XP_001895831.1| SWIB/MDM2 domain containing protein [Brugia malayi]
gi|158597090|gb|EDP35318.1| SWIB/MDM2 domain containing protein [Brugia malayi]
Length = 299
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Query: 144 KAEAFPQISAEVAKENPPVGAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWA 203
+A Q + + K N G+K R G N C ++ +L AV G+ M R +++K +WA
Sbjct: 124 RAAVTRQTTKKRNKGNIEGGSKPRKKKGPYNVYCALTEDLAAVCGKRYMRRCDVIKAMWA 183
Query: 204 YIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHII 248
Y R NNL DP +KR ++ D+ L +F+ F + K LA HII
Sbjct: 184 YFRSNNLLDPKDKRYVLPDEPLMKIFKKRFL-AFGLMKDLAAHII 227
>gi|308813073|ref|XP_003083843.1| AmphiHMG1/2 (ISS) [Ostreococcus tauri]
gi|116055725|emb|CAL57810.1| AmphiHMG1/2 (ISS) [Ostreococcus tauri]
Length = 252
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 103/230 (44%), Gaps = 15/230 (6%)
Query: 4 DQEIAKGVETLLRQSDRNASTSLNGVVKQLEAKLGLDLSHKAGFIRDQISLLLR--SHPT 61
+ EI++ V LL QSD + T+++ + ++LE KLG DLS FIR Q+ L +
Sbjct: 12 EDEISRCVPELLLQSDLD-KTTVSALHRELELKLGRDLSQHVEFIRHQVPLKKKPGCRGK 70
Query: 62 PQQVATNTQPQPQPQPQQLPPKDHFTLQHHPQFSLPPQQFPPHFALHHPHPHLPQFPQEL 121
++V T+P+ P + F + P+ ++ P+ + L + +
Sbjct: 71 TKEVTDPTRPKGPKGPYMM-----FCAERRPKI----KKEKPNLSFQDIARQLGTEWRTM 121
Query: 122 NFSQPQPSQAAAPPPQPHSNVSKAEAFPQISAEVAKENPPVGAKRRGGPGGLNKVCGVSP 181
+ S + A + A P SAE+ K ++R GGL + SP
Sbjct: 122 SDSVRAQYEHMAENDKTRYAKELAMWTPLSSAEMEKLREE--QRKRKAAGGLQVMYKCSP 179
Query: 182 ELQAVVGQ-PAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFE 230
EL +G + R + LW Y RKN+L DP NKR ++ ++ L + E
Sbjct: 180 ELSKFLGGVKEINRQALTTYLWKYFRKNDLMDPINKRYVVANEKLAKLLE 229
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 284 LAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELL 332
L+KFLG G +E+ + T +W+Y + N L DP+N ++ + KL +LL
Sbjct: 181 LSKFLG-GVKEINRQALTTYLWKYFRKNDLMDPINKRYVVANEKLAKLL 228
>gi|365991387|ref|XP_003672522.1| hypothetical protein NDAI_0K00880 [Naumovozyma dairenensis CBS 421]
gi|343771298|emb|CCD27279.1| hypothetical protein NDAI_0K00880 [Naumovozyma dairenensis CBS 421]
Length = 266
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 53/83 (63%), Gaps = 3/83 (3%)
Query: 168 GGPGGLN--KVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDAL 225
G GL+ KV P + + G+ + RT++VKQ+W YI++N LQ+P+++R+I+CD +
Sbjct: 173 GKARGLSAHKVILSGPLSELLGGEKELARTQVVKQVWNYIKENKLQNPNDRREILCDSNM 232
Query: 226 RVVFETDCTDMFKMNKLLAKHII 248
+F T MF MNK+L+ H+
Sbjct: 233 EPIFGKKMT-MFSMNKILSNHLF 254
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 278 VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESI 337
VI+S L++ LG G +E+ + + K+VW YIK N L++P + ILCD+ + + G + +
Sbjct: 183 VILSGPLSELLG-GEKELARTQVVKQVWNYIKENKLQNPNDRREILCDSNMEPIFG-KKM 240
Query: 338 SALGIQEMLARNHFL 352
+ + ++L+ NH
Sbjct: 241 TMFSMNKILS-NHLF 254
>gi|289740333|gb|ADD18914.1| RNA polymerase I transcription factor subunit Spp27 [Glossina
morsitans morsitans]
Length = 239
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 46/77 (59%)
Query: 172 GLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFET 231
G + +SPEL A++G A+PR E+VK++WA I++ NL DP NK+ ICDD L V +
Sbjct: 162 GFTRSYNLSPELSALMGADALPRHEVVKKVWAIIKERNLYDPKNKQFAICDDELMKVMKV 221
Query: 232 DCTDMFKMNKLLAKHII 248
F M K L H +
Sbjct: 222 KRFRTFGMLKHLKPHFL 238
>gi|398807622|ref|ZP_10566498.1| DNA topoisomerase III [Variovorax sp. CF313]
gi|398089157|gb|EJL79685.1| DNA topoisomerase III [Variovorax sp. CF313]
Length = 982
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 43/68 (63%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
S L AV+G + RTE++K+LW YI+ N LQD +NKR I D L+ VF D MF++
Sbjct: 912 SDSLAAVIGAEPVARTEVIKKLWDYIKANGLQDAANKRAINADAKLKPVFGKDQVTMFEL 971
Query: 240 NKLLAKHI 247
++ KH+
Sbjct: 972 AGIVGKHL 979
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 281 SEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISAL 340
S++LA +G + + E K++W+YIK N L+D N I DAKL+ + G + ++
Sbjct: 912 SDSLAAVIGA--EPVARTEVIKKLWDYIKANGLQDAANKRAINADAKLKPVFGKDQVTMF 969
Query: 341 GIQEMLARN 349
+ ++ ++
Sbjct: 970 ELAGIVGKH 978
>gi|124265249|ref|YP_001019253.1| hypothetical protein Mpe_A0056 [Methylibium petroleiphilum PM1]
gi|124258024|gb|ABM93018.1| conserved hypothetical protein [Methylibium petroleiphilum PM1]
Length = 133
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 43/68 (63%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
S L A+VG +PRT++ K++W YI+K+ LQD KR I+ D L+ VF DMF+M
Sbjct: 65 SAALAAIVGDKPLPRTDVTKKIWEYIKKHKLQDAVQKRVIVADAKLKEVFGKAKADMFEM 124
Query: 240 NKLLAKHI 247
KL+ H+
Sbjct: 125 TKLVNSHL 132
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 281 SEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLG 333
S ALA +G + + + + TK++WEYIK + L+D + VI+ DAKL+E+ G
Sbjct: 65 SAALAAIVG--DKPLPRTDVTKKIWEYIKKHKLQDAVQKRVIVADAKLKEVFG 115
>gi|358057968|dbj|GAA96213.1| hypothetical protein E5Q_02877 [Mixia osmundae IAM 14324]
Length = 276
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 175 KVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF-ETDC 233
K SP L AV G R + K +WAY+R++NL+DP+N R II DDAL+ VF +
Sbjct: 200 KTFECSPALAAVCGVTRTNRFAVNKHIWAYVREHNLKDPNNGRNIILDDALKAVFGDRKT 259
Query: 234 TDMFKMNKLLAKHI 247
MF M K AKH+
Sbjct: 260 ISMFAMPKHYAKHL 273
>gi|221066190|ref|ZP_03542295.1| SWIB/MDM2 domain protein [Comamonas testosteroni KF-1]
gi|264679170|ref|YP_003279077.1| Swib/Mdm2 [Comamonas testosteroni CNB-2]
gi|299533552|ref|ZP_07046928.1| Swib/Mdm2 [Comamonas testosteroni S44]
gi|418529807|ref|ZP_13095735.1| Swib/Mdm2 [Comamonas testosteroni ATCC 11996]
gi|220711213|gb|EED66581.1| SWIB/MDM2 domain protein [Comamonas testosteroni KF-1]
gi|262209683|gb|ACY33781.1| Swib/Mdm2 [Comamonas testosteroni CNB-2]
gi|298718458|gb|EFI59439.1| Swib/Mdm2 [Comamonas testosteroni S44]
gi|371453084|gb|EHN66108.1| Swib/Mdm2 [Comamonas testosteroni ATCC 11996]
Length = 102
Score = 67.8 bits (164), Expect = 8e-09, Method: Composition-based stats.
Identities = 34/68 (50%), Positives = 44/68 (64%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
S L AVVG+ +PRTEI+ +LW YI+ NNLQD +NKR I D L+ VF MF+M
Sbjct: 34 SAALAAVVGKDPLPRTEIISKLWVYIKANNLQDAANKRMINADAKLKEVFGKPQVSMFEM 93
Query: 240 NKLLAKHI 247
L+ KH+
Sbjct: 94 AGLIGKHV 101
Score = 38.5 bits (88), Expect = 5.0, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 281 SEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISAL 340
S ALA +G + + E ++W YIK N+L+D N +I DAKL+E+ G +S
Sbjct: 34 SAALAAVVGKD--PLPRTEIISKLWVYIKANNLQDAANKRMINADAKLKEVFGKPQVSMF 91
Query: 341 GIQEMLARN 349
+ ++ ++
Sbjct: 92 EMAGLIGKH 100
>gi|239818160|ref|YP_002947070.1| DNA topoisomerase III [Variovorax paradoxus S110]
gi|239804737|gb|ACS21804.1| DNA topoisomerase III [Variovorax paradoxus S110]
Length = 980
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 43/68 (63%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
S L AV+G + RTE++K+LW YI+ N LQD +NKR I D L+ VF D MF++
Sbjct: 910 SDSLAAVIGAEPVARTEVIKKLWDYIKANGLQDAANKRAINADAKLKPVFGKDQVTMFEL 969
Query: 240 NKLLAKHI 247
++ KH+
Sbjct: 970 AGIVGKHL 977
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 281 SEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISAL 340
S++LA +G + + E K++W+YIK N L+D N I DAKL+ + G + ++
Sbjct: 910 SDSLAAVIGA--EPVARTEVIKKLWDYIKANGLQDAANKRAINADAKLKPVFGKDQVTMF 967
Query: 341 GIQEMLARN 349
+ ++ ++
Sbjct: 968 ELAGIVGKH 976
>gi|406987616|gb|EKE07914.1| hypothetical protein ACD_17C00463G0001, partial [uncultured
bacterium]
Length = 497
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 46/69 (66%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
S ELQAVVGQ + R E K++W YI+ +LQDP+NKR+I+ D L V ++ DM K
Sbjct: 427 ASKELQAVVGQGEITRPEATKKIWDYIKAKHLQDPANKRRILPDTLLAKVIGSEPIDMMK 486
Query: 239 MNKLLAKHI 247
++ L+KH+
Sbjct: 487 LSGFLSKHL 495
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 281 SEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISAL 340
S+ L +G G E+ + EATK++W+YIK HL+DP N IL D L +++G E I +
Sbjct: 428 SKELQAVVGQG--EITRPEATKKIWDYIKAKHLQDPANKRRILPDTLLAKVIGSEPIDMM 485
Query: 341 GIQEMLARN 349
+ L+++
Sbjct: 486 KLSGFLSKH 494
>gi|414873009|tpg|DAA51566.1| TPA: hypothetical protein ZEAMMB73_058775 [Zea mays]
Length = 61
Score = 67.4 bits (163), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 42/55 (76%)
Query: 192 MPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKH 246
+ R+++VK++W YI+ NNLQDPS++RKIICD+ L+ +F + F ++KLLA H
Sbjct: 2 LSRSDVVKKMWDYIKGNNLQDPSDRRKIICDEKLKDLFGVETFTGFTVSKLLAPH 56
Score = 53.1 bits (126), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 297 QAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNHFLR 353
+++ K++W+YIK N+L+DP + I+CD KL++L G E+ + + ++LA HF +
Sbjct: 4 RSDVVKKMWDYIKGNNLQDPSDRRKIICDEKLKDLFGVETFTGFTVSKLLA-PHFTK 59
>gi|156841806|ref|XP_001644274.1| hypothetical protein Kpol_1030p26 [Vanderwaltozyma polyspora DSM
70294]
gi|156114913|gb|EDO16416.1| hypothetical protein Kpol_1030p26 [Vanderwaltozyma polyspora DSM
70294]
Length = 152
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 55/81 (67%), Gaps = 2/81 (2%)
Query: 168 GGPGGLNK-VCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALR 226
G GG++ + +S ELQ + ++ RT+ VK++W YI+ NNLQ+P+++R+I+CD +
Sbjct: 34 GAHGGISSTIVLLSDELQDFLKVESVTRTQAVKRVWEYIKLNNLQNPNDRREILCDSLME 93
Query: 227 VVFETDCTDMFKMNKLLAKHI 247
+F T MF +NK+LA+++
Sbjct: 94 PIFGKKVT-MFTLNKILARNM 113
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 51/84 (60%), Gaps = 5/84 (5%)
Query: 270 GMESGPSS--VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAK 327
G G SS V++S+ L FL + + +A KRVWEYIK+N+L++P + ILCD+
Sbjct: 34 GAHGGISSTIVLLSDELQDFLKV--ESVTRTQAVKRVWEYIKLNNLQNPNDRREILCDSL 91
Query: 328 LRELLGCESISALGIQEMLARNHF 351
+ + G + ++ + ++LARN +
Sbjct: 92 MEPIFG-KKVTMFTLNKILARNMY 114
>gi|85374762|ref|YP_458824.1| hypothetical protein ELI_09675 [Erythrobacter litoralis HTCC2594]
gi|84787845|gb|ABC64027.1| hypothetical protein ELI_09675 [Erythrobacter litoralis HTCC2594]
Length = 82
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%)
Query: 168 GGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRV 227
G L K +SPEL+ VVG+ M R ++ ++W YI+K++LQD +KR+I DD L
Sbjct: 2 AGNNALQKPVTLSPELENVVGKGPMTRAQVTSKVWEYIKKHDLQDSKDKRQINPDDKLGA 61
Query: 228 VFETDCTDMFKMNKLLAKHI 247
V + MFKM ++KH+
Sbjct: 62 VIGKEQISMFKMTAAVSKHL 81
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 278 VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESI 337
V +S L +G G M +A+ T +VWEYIK + L+D + I D KL ++G E I
Sbjct: 11 VTLSPELENVVGKG--PMTRAQVTSKVWEYIKKHDLQDSKDKRQINPDDKLGAVIGKEQI 68
Query: 338 SALGIQEMLAR 348
S + +++
Sbjct: 69 SMFKMTAAVSK 79
>gi|389688616|ref|ZP_10178283.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Microvirga sp. WSM3557]
gi|388590575|gb|EIM30858.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Microvirga sp. WSM3557]
Length = 103
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF-ETDCTDMFK 238
S EL AVVG + R E V ++W YI+ + LQ+P NKR+I+ D L+ VF + MF+
Sbjct: 34 SQELAAVVGSAPLSRPEAVSKIWEYIKTHKLQNPQNKREIMADQKLQAVFGGKNKVSMFE 93
Query: 239 MNKLLAKHI 247
MNK LA+H+
Sbjct: 94 MNKYLAQHL 102
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 8/92 (8%)
Query: 263 DAESTTEGMESGPSSVII-----SEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPL 317
D + EG P+S + S+ LA +G+ + + EA ++WEYIK + L++P
Sbjct: 11 DQANAAEGTAQEPTSAFLKPLQPSQELAAVVGSA--PLSRPEAVSKIWEYIKTHKLQNPQ 68
Query: 318 NSMVILCDAKLRELLGCES-ISALGIQEMLAR 348
N I+ D KL+ + G ++ +S + + LA+
Sbjct: 69 NKREIMADQKLQAVFGGKNKVSMFEMNKYLAQ 100
>gi|391870930|gb|EIT80099.1| hypothetical protein Ao3042_03411 [Aspergillus oryzae 3.042]
Length = 305
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 44/58 (75%)
Query: 190 PAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHI 247
P + R + VK++WAYIR++ LQDP+++R+I CD+ +R VF+ D MF M K+L++++
Sbjct: 243 PQLSRPQTVKKVWAYIREHELQDPTDRRQIRCDEPMRAVFKQDRIHMFTMTKILSQNL 300
>gi|357152250|ref|XP_003576058.1| PREDICTED: uncharacterized protein LOC100825851 [Brachypodium
distachyon]
Length = 153
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 179 VSPELQAVVGQPA-MPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFET-DCTDM 236
+SPEL+ VG +PRTE +K +WA+I+ NNLQDP+NK+ I+CDD L+ +F D
Sbjct: 81 ISPELREFVGGAEELPRTEALKIIWAHIKGNNLQDPANKKIIVCDDKLKKIFGGRDRVGF 140
Query: 237 FKMNKLLAKHI 247
+++ LL H
Sbjct: 141 LEISGLLNPHF 151
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLG 333
IS L +F+G G E+ + EA K +W +IK N+L+DP N +I+CD KL+++ G
Sbjct: 81 ISPELREFVG-GAEELPRTEALKIIWAHIKGNNLQDPANKKIIVCDDKLKKIFG 133
>gi|21357829|ref|NP_647745.1| CG1240 [Drosophila melanogaster]
gi|7292276|gb|AAF47684.1| CG1240 [Drosophila melanogaster]
gi|16769634|gb|AAL29036.1| LD45195p [Drosophila melanogaster]
gi|220956410|gb|ACL90748.1| CG1240-PA [synthetic construct]
Length = 244
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 6/87 (6%)
Query: 168 GGPG------GLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIIC 221
GG G G + +SPEL A++G+ ++PR E+VK++WA I++ +L DP NK+ IC
Sbjct: 157 GGTGSGRKSTGFTRAYNLSPELSALMGESSLPRHEVVKKVWAIIKERDLYDPKNKQFAIC 216
Query: 222 DDALRVVFETDCTDMFKMNKLLAKHII 248
DD L V + F M K L H +
Sbjct: 217 DDELMKVMKIRRFRTFGMLKHLKPHFL 243
>gi|300309713|ref|YP_003773805.1| hypothetical protein Hsero_0372 [Herbaspirillum seropedicae SmR1]
gi|300072498|gb|ADJ61897.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1]
Length = 175
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF-ETDCTDMFK 238
S L VVG +PRTE+ K++W YI+KN LQ+ NKR I DD L+ +F MF+
Sbjct: 106 SAALGEVVGAKPLPRTEVTKKVWEYIKKNKLQNAENKRNIDADDKLKAIFGGKKQVTMFE 165
Query: 239 MNKLLAKHI 247
M KL++ H+
Sbjct: 166 MTKLISAHL 174
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 26/44 (59%)
Query: 290 TGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLG 333
G + + + E TK+VWEYIK N L++ N I D KL+ + G
Sbjct: 113 VGAKPLPRTEVTKKVWEYIKKNKLQNAENKRNIDADDKLKAIFG 156
>gi|171913835|ref|ZP_02929305.1| hypothetical protein VspiD_21690 [Verrucomicrobium spinosum DSM
4136]
Length = 92
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 183 LQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF-ETDCTDMFKMNK 241
L +VG +PR+E+ K+LW YI+KN LQDP K I D+AL+ VF MF+M K
Sbjct: 26 LAVIVGSTPIPRSEVTKKLWDYIKKNGLQDPKKKTNINADEALKAVFGGKKQVTMFEMTK 85
Query: 242 LLAKHI 247
L++ HI
Sbjct: 86 LVSAHI 91
>gi|38047929|gb|AAR09867.1| similar to Drosophila melanogaster CG1240, partial [Drosophila
yakuba]
Length = 133
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%)
Query: 172 GLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFET 231
G + +SPEL A++G+ ++PR E+VK++WA I++ +L DP NK+ ICDD L V +
Sbjct: 56 GFTRAYNLSPELSALMGESSLPRHEVVKKVWAIIKERDLYDPKNKQFAICDDELMKVMKI 115
Query: 232 DCTDMFKMNKLLAKHII 248
F M K L H +
Sbjct: 116 RRFRTFGMLKHLKPHFL 132
>gi|242011317|ref|XP_002426399.1| 46 kDa FK506-binding nuclear protein, putative [Pediculus humanus
corporis]
gi|212510498|gb|EEB13661.1| 46 kDa FK506-binding nuclear protein, putative [Pediculus humanus
corporis]
Length = 258
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 44/77 (57%)
Query: 171 GGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFE 230
G K C +SPEL +VG+ +MPR E+VK++W I++ +L DP NK+ ICD+ L V
Sbjct: 180 SGYTKPCNLSPELAKLVGRDSMPRHEVVKKIWEIIKERDLYDPENKQYAICDNDLFKVIG 239
Query: 231 TDCTDMFKMNKLLAKHI 247
F M K L H
Sbjct: 240 IKRFRAFSMMKYLKNHF 256
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISA 339
+S LAK +G M + E K++WE IK L DP N +CD L +++G + A
Sbjct: 188 LSPELAKLVGRDS--MPRHEVVKKIWEIIKERDLYDPENKQYAICDNDLFKVIGIKRFRA 245
Query: 340 LGIQEMLARNHF 351
+ + L +NHF
Sbjct: 246 FSMMKYL-KNHF 256
>gi|375108204|ref|ZP_09754465.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Burkholderiales bacterium JOSHI_001]
gi|374668935|gb|EHR73720.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Burkholderiales bacterium JOSHI_001]
Length = 143
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 42/68 (61%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
S L AV+G+ MPRTE+ K++W YI+KN LQD K I D L+ +F+ MF+M
Sbjct: 75 SAALAAVIGEKPMPRTEVTKKVWEYIKKNGLQDKVKKTMINADAKLKEIFKQAQVSMFEM 134
Query: 240 NKLLAKHI 247
KL+ H+
Sbjct: 135 TKLINGHL 142
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 281 SEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISAL 340
S ALA +G + M + E TK+VWEYIK N L+D + +I DAKL+E+ +S
Sbjct: 75 SAALAAVIGE--KPMPRTEVTKKVWEYIKKNGLQDKVKKTMINADAKLKEIFKQAQVSMF 132
Query: 341 GIQEML 346
+ +++
Sbjct: 133 EMTKLI 138
>gi|294874755|ref|XP_002767082.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239868510|gb|EEQ99799.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 154
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 5/85 (5%)
Query: 172 GLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFET 231
GL+++C +SPEL +VG P R +I K+LW YI+ +NLQ+ ++KR I D AL +
Sbjct: 67 GLHQLCALSPELSTIVGAPKASRVDITKKLWGYIKSHNLQEETDKRNIKPDAALGKELSS 126
Query: 232 D-----CTDMFKMNKLLAKHIIPLE 251
+M M K + KH+ +E
Sbjct: 127 RIIPLPVVNMCTMQKYVQKHVTKIE 151
>gi|108762999|ref|YP_629784.1| DNA topoisomerase domain-containing protein [Myxococcus xanthus DK
1622]
gi|338529900|ref|YP_004663234.1| DNA topoisomerase domain-containing protein [Myxococcus fulvus
HW-1]
gi|108466879|gb|ABF92064.1| DNA topoisomerase domain protein [Myxococcus xanthus DK 1622]
gi|337255996|gb|AEI62156.1| DNA topoisomerase domain-containing protein [Myxococcus fulvus
HW-1]
Length = 105
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF-ETDCTDMFK 238
S L +VG +PRTE+VK+LWAYI+K LQD NKR+I DD L+ +F MF+
Sbjct: 36 SAALAEIVGAKPLPRTEVVKKLWAYIKKQGLQDAKNKRQINADDKLKPIFGGKKSVTMFE 95
Query: 239 MNKLLAKHI 247
M L+ K +
Sbjct: 96 MTALVNKQL 104
>gi|442318654|ref|YP_007358675.1| DNA topoisomerase domain-containing protein [Myxococcus stipitatus
DSM 14675]
gi|441486296|gb|AGC42991.1| DNA topoisomerase domain-containing protein [Myxococcus stipitatus
DSM 14675]
Length = 105
Score = 66.2 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/69 (49%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF-ETDCTDMFK 238
S L +VG +PRTE+VK+LWAYI+KNNLQD NKR+I DD L+ +F MF+
Sbjct: 36 SAALAEIVGSKPLPRTEVVKKLWAYIKKNNLQDAKNKRQINADDKLKPIFGGKKNVTMFE 95
Query: 239 MNKLLAKHI 247
M L+ K +
Sbjct: 96 MTALVNKQL 104
>gi|393906748|gb|EFO19822.2| SWIB/MDM2 domain-containing protein [Loa loa]
Length = 270
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 163 GAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICD 222
G+K R G N C ++ +L AV G+ M R +++K +WAY R NNL DP +KR ++ D
Sbjct: 115 GSKPRKKKGPYNVYCALTDDLAAVCGKRYMRRCDVIKAMWAYFRSNNLLDPKDKRYVLPD 174
Query: 223 DALRVVFETDCTDMFKMNKLLAKHII 248
+ L +F+ F + K LA HII
Sbjct: 175 EPLMKIFKRRFL-AFGLMKDLAAHII 199
>gi|402589744|gb|EJW83675.1| SWIB/MDM2 domain-containing protein [Wuchereria bancrofti]
Length = 299
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 163 GAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICD 222
G+K R G N C ++ +L AV G+ M R +++K +WAY R NNL DP +KR ++ D
Sbjct: 144 GSKPRKKKGPYNVYCALTEDLAAVCGKRYMRRCDVIKAMWAYFRSNNLLDPKDKRYVLPD 203
Query: 223 DALRVVFETDCTDMFKMNKLLAKHII 248
+ L +F+ F + K LA HII
Sbjct: 204 EPLMKIFKKRFL-AFGLMKDLAAHII 228
>gi|344233090|gb|EGV64963.1| hypothetical protein CANTEDRAFT_121207 [Candida tenuis ATCC 10573]
gi|344233091|gb|EGV64964.1| SWIB-domain-containing protein [Candida tenuis ATCC 10573]
Length = 252
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%)
Query: 183 LQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKL 242
L ++G + PR ++VK LW YI+ N LQDP++ R I+CD+ L +F+ D F M K
Sbjct: 140 LSEIIGVTSAPRGQVVKLLWQYIKGNKLQDPNSGRTILCDEKLENLFKKKKVDSFAMQKD 199
Query: 243 LAKHII 248
L KH+
Sbjct: 200 LVKHMF 205
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 32/55 (58%)
Query: 297 QAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNHF 351
+ + K +W+YIK N L+DP + ILCD KL L + + + +Q+ L ++ F
Sbjct: 151 RGQVVKLLWQYIKGNKLQDPNSGRTILCDEKLENLFKKKKVDSFAMQKDLVKHMF 205
>gi|116784051|gb|ABK23195.1| unknown [Picea sitchensis]
gi|148907345|gb|ABR16808.1| unknown [Picea sitchensis]
Length = 129
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 47/64 (73%), Gaps = 2/64 (3%)
Query: 166 RRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDAL 225
RRGG G+ + +SP +Q +G +PRT+ +K++W YI++ +LQDP+N+R+I+CD+ L
Sbjct: 46 RRGG--GITQPRPISPAMQKFLGVSEIPRTKAIKKIWEYIKEKDLQDPANRREIVCDENL 103
Query: 226 RVVF 229
+ +F
Sbjct: 104 KSIF 107
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 4/76 (5%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGC-ESIS 338
IS A+ KFLG E+ + +A K++WEYIK L+DP N I+CD L+ + G E +
Sbjct: 57 ISPAMQKFLGVS--EIPRTKAIKKIWEYIKEKDLQDPANRREIVCDENLKSIFGGRERVG 114
Query: 339 ALGIQEMLARNHFLRQ 354
L I ++ + HF+++
Sbjct: 115 FLEISGLM-KPHFIKE 129
>gi|312084374|ref|XP_003144250.1| SWIB/MDM2 domain-containing protein [Loa loa]
Length = 299
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 163 GAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICD 222
G+K R G N C ++ +L AV G+ M R +++K +WAY R NNL DP +KR ++ D
Sbjct: 144 GSKPRKKKGPYNVYCALTDDLAAVCGKRYMRRCDVIKAMWAYFRSNNLLDPKDKRYVLPD 203
Query: 223 DALRVVFETDCTDMFKMNKLLAKHII 248
+ L +F+ F + K LA HII
Sbjct: 204 EPLMKIFKRRFL-AFGLMKDLAAHII 228
>gi|195126905|ref|XP_002007909.1| GI13202 [Drosophila mojavensis]
gi|193919518|gb|EDW18385.1| GI13202 [Drosophila mojavensis]
Length = 245
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%)
Query: 172 GLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFET 231
G + +SPEL A++G ++PR E+VK++WA I++ +L DP NK+ ICDD L V +
Sbjct: 168 GFTRAYNLSPELSALMGADSLPRHEVVKKVWAIIKERDLYDPKNKQFAICDDELMKVMKV 227
Query: 232 DCTDMFKMNKLLAKHII 248
F M K L H +
Sbjct: 228 KRFRTFGMLKHLKPHFL 244
>gi|444916606|ref|ZP_21236719.1| DNA topoisomerase III [Cystobacter fuscus DSM 2262]
gi|444711891|gb|ELW52824.1| DNA topoisomerase III [Cystobacter fuscus DSM 2262]
Length = 115
Score = 65.9 bits (159), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/69 (46%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF-ETDCTDMFK 238
SP L +VG A+PRT +V ++W YI+KNNLQDP NKR+I DD L+ +F MF+
Sbjct: 46 SPALAEIVGSKALPRTAVVSKIWEYIKKNNLQDPKNKRQINADDKLKPIFGGKKSVTMFE 105
Query: 239 MNKLLAKHI 247
+ L+ K++
Sbjct: 106 LTALVNKNL 114
Score = 38.5 bits (88), Expect = 5.4, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 281 SEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGC-ESISA 339
S ALA+ +G+ + + + ++WEYIK N+L+DP N I D KL+ + G +S++
Sbjct: 46 SPALAEIVGS--KALPRTAVVSKIWEYIKKNNLQDPKNKRQINADDKLKPIFGGKKSVTM 103
Query: 340 LGIQEMLARN 349
+ ++ +N
Sbjct: 104 FELTALVNKN 113
>gi|134095941|ref|YP_001101016.1| hypothetical protein HEAR2779 [Herminiimonas arsenicoxydans]
gi|133739844|emb|CAL62895.1| Conserved hypothetical protein [Herminiimonas arsenicoxydans]
Length = 150
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDC-TDMFK 238
S L AV+G PRTE+ K++W YI+K LQ+P NKR I DD L+ VF MF+
Sbjct: 81 STVLAAVIGAAPAPRTEVTKKVWEYIKKFKLQNPENKRMIDADDKLKAVFGGKKQVSMFE 140
Query: 239 MNKLLAKHI 247
M KL++ H+
Sbjct: 141 MTKLISGHL 149
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 297 QAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLG 333
+ E TK+VWEYIK L++P N +I D KL+ + G
Sbjct: 95 RTEVTKKVWEYIKKFKLQNPENKRMIDADDKLKAVFG 131
>gi|224588358|gb|ACN58982.1| SWIB complex BAF60b [uncultured bacterium BLR19]
Length = 133
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFE-TDCTDMFK 238
S L V+G +PRT+++K++W YI+KN LQD +NKR I D L+V+F+ + MF
Sbjct: 64 SATLADVIGGSPVPRTQVIKKIWDYIKKNGLQDKTNKRMINADAKLKVLFDGKNQISMFD 123
Query: 239 MNKLLAKHI 247
+ K+++KH+
Sbjct: 124 LAKIVSKHV 132
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 291 GGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELL-GCESISALGIQEMLAR 348
GG + + + K++W+YIK N L+D N +I DAKL+ L G IS + +++++
Sbjct: 72 GGSPVPRTQVIKKIWDYIKKNGLQDKTNKRMINADAKLKVLFDGKNQISMFDLAKIVSK 130
>gi|195377146|ref|XP_002047353.1| GJ11979 [Drosophila virilis]
gi|194154511|gb|EDW69695.1| GJ11979 [Drosophila virilis]
Length = 247
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%)
Query: 172 GLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFET 231
G + +SPEL A++G ++PR E+VK++WA I++ +L DP NK+ ICDD L V +
Sbjct: 170 GFTRAYNLSPELSALMGADSLPRHEVVKKVWAIIKERDLYDPKNKQFAICDDELMKVMKV 229
Query: 232 DCTDMFKMNKLLAKHII 248
F M K L H +
Sbjct: 230 KRFRTFGMLKHLKPHFL 246
>gi|392954835|ref|ZP_10320386.1| DNA topoisomerase domain protein [Hydrocarboniphaga effusa AP103]
gi|391857492|gb|EIT68023.1| DNA topoisomerase domain protein [Hydrocarboniphaga effusa AP103]
Length = 98
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Query: 164 AKRRGGP-GGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICD 222
A ++ P GG+++ S +L VVG + R ++ K++W YI+K+NLQD +N+R I D
Sbjct: 11 ATKKAAPRGGISQTVTPSAQLAEVVGSAPITRADLTKKVWEYIKKHNLQDATNRRAINAD 70
Query: 223 DALRVVF-ETDCTDMFKMNKLLAKHI 247
L+ +F D MF+M KL+ +H+
Sbjct: 71 AKLKPIFGGKDQVTMFEMTKLVNQHV 96
Score = 44.3 bits (103), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 277 SVIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLG 333
+V S LA+ +G+ + +A+ TK+VWEYIK ++L+D N I DAKL+ + G
Sbjct: 24 TVTPSAQLAEVVGSA--PITRADLTKKVWEYIKKHNLQDATNRRAINADAKLKPIFG 78
>gi|125980237|ref|XP_001354143.1| GA11609 [Drosophila pseudoobscura pseudoobscura]
gi|195173955|ref|XP_002027749.1| GL18416 [Drosophila persimilis]
gi|54642447|gb|EAL31195.1| GA11609 [Drosophila pseudoobscura pseudoobscura]
gi|194114711|gb|EDW36754.1| GL18416 [Drosophila persimilis]
Length = 246
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%)
Query: 172 GLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFET 231
G + +SPEL A++G P++PR E+VK++WA I++ +L DP NK+ ICD+ L V +
Sbjct: 169 GFTRAYNLSPELSALMGAPSLPRHEVVKKVWAIIKERDLYDPKNKQFAICDEELMKVMKI 228
Query: 232 DCTDMFKMNKLLAKHII 248
F M K L H +
Sbjct: 229 RRFRTFGMLKHLKPHFL 245
>gi|405372157|ref|ZP_11027421.1| DNA topoisomerase III [Chondromyces apiculatus DSM 436]
gi|397088530|gb|EJJ19511.1| DNA topoisomerase III [Myxococcus sp. (contaminant ex DSM 436)]
Length = 105
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 46/70 (65%), Gaps = 3/70 (4%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF--ETDCTDMF 237
S L +VG +PRTE+VK+LWAYI+K LQD NKR+I DD L+ +F + + T MF
Sbjct: 36 SAALAEIVGTKPLPRTEVVKKLWAYIKKQGLQDAKNKRQINADDKLKPIFGGKKNVT-MF 94
Query: 238 KMNKLLAKHI 247
+M L+ K +
Sbjct: 95 EMTALVNKQL 104
>gi|182412732|ref|YP_001817798.1| SWIB/MDM2 domain-containing protein [Opitutus terrae PB90-1]
gi|177839946|gb|ACB74198.1| SWIB/MDM2 domain protein [Opitutus terrae PB90-1]
Length = 76
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 47/72 (65%), Gaps = 3/72 (4%)
Query: 179 VSPE--LQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF-ETDCTD 235
V+P+ L AVVG MPRTE+ K+LWAYI+KN LQD K +I D+ L +F +
Sbjct: 4 VTPDAALAAVVGSNPMPRTELTKKLWAYIKKNGLQDKKVKTQINADEKLLPIFNKKKSVS 63
Query: 236 MFKMNKLLAKHI 247
MF+M KL++ H+
Sbjct: 64 MFEMTKLVSGHV 75
>gi|194865200|ref|XP_001971311.1| GG14886 [Drosophila erecta]
gi|190653094|gb|EDV50337.1| GG14886 [Drosophila erecta]
Length = 244
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%)
Query: 172 GLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFET 231
G + +SPEL A++G+ ++PR E+VK++WA I++ +L DP NK+ ICDD L V +
Sbjct: 167 GFTRAYNLSPELSALMGESSLPRHEVVKKVWAIIKERDLYDPKNKQFAICDDELMKVMKI 226
Query: 232 DCTDMFKMNKLLAKHII 248
F M K L H +
Sbjct: 227 RRFRTFGMLKHLKPHFL 243
>gi|340725447|ref|XP_003401081.1| PREDICTED: upstream activation factor subunit spp27-like [Bombus
terrestris]
Length = 264
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 41/70 (58%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+SPEL AVVG M R E+VK++W+ I++ NL DP NK+ ICDD L + F
Sbjct: 194 LSPELSAVVGAEQMARHEVVKKMWSIIKERNLYDPKNKQYAICDDELLKIIGVKRFRTFG 253
Query: 239 MNKLLAKHII 248
M K L H +
Sbjct: 254 MMKYLKNHFV 263
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 290 TGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARN 349
G +M + E K++W IK +L DP N +CD +L +++G + G+ + L +N
Sbjct: 202 VGAEQMARHEVVKKMWSIIKERNLYDPKNKQYAICDDELLKIIGVKRFRTFGMMKYL-KN 260
Query: 350 HFL 352
HF+
Sbjct: 261 HFV 263
>gi|357613442|gb|EHJ68506.1| hypothetical protein KGM_09093 [Danaus plexippus]
Length = 235
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 43/70 (61%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+SP L ++G+ MPR E+VK++W I++ NL DP+NK+ ICDDAL V T F
Sbjct: 164 LSPALSELMGETEMPRHEVVKRVWTIIKEKNLYDPNNKQFAICDDALYKVIGTKRFRTFG 223
Query: 239 MNKLLAKHII 248
M K L H +
Sbjct: 224 MMKYLKTHFL 233
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISA 339
+S AL++ +G EM + E KRVW IK +L DP N +CD L +++G +
Sbjct: 164 LSPALSELMGET--EMPRHEVVKRVWTIIKEKNLYDPNNKQFAICDDALYKVIGTKRFRT 221
Query: 340 LGIQEMLARNHFL 352
G+ + L + HFL
Sbjct: 222 FGMMKYL-KTHFL 233
>gi|195492893|ref|XP_002094186.1| GE20337 [Drosophila yakuba]
gi|194180287|gb|EDW93898.1| GE20337 [Drosophila yakuba]
Length = 244
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%)
Query: 172 GLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFET 231
G + +SPEL A++G+ ++PR E+VK++WA I++ +L DP NK+ ICDD L V +
Sbjct: 167 GFTRAYNLSPELSALMGESSLPRHEVVKKVWAIIKERDLYDPKNKQFAICDDELMKVMKI 226
Query: 232 DCTDMFKMNKLLAKHII 248
F M K L H +
Sbjct: 227 RRFRTFGMLKHLKPHFL 243
>gi|156095480|ref|XP_001613775.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148802649|gb|EDL44048.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 140
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 46/78 (58%)
Query: 170 PGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF 229
P GL C + L+ + R ++K W YI++NNLQ+P+ KRKII D+ L+ V
Sbjct: 57 PNGLQIDCEIKSPLKEFLNTDTASRVFVLKYAWKYIKENNLQNPNTKRKIIPDEKLKNVL 116
Query: 230 ETDCTDMFKMNKLLAKHI 247
E D DM ++ KLL +H+
Sbjct: 117 EKDEVDMLEVPKLLFRHM 134
>gi|338731806|ref|YP_004662925.1| hypothetical protein SNE_B24300 [Simkania negevensis Z]
gi|336481189|emb|CCB87789.1| putative uncharacterized protein [Simkania negevensis Z]
Length = 85
Score = 65.1 bits (157), Expect = 5e-08, Method: Composition-based stats.
Identities = 34/70 (48%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCT-DMF 237
VS EL V+G MPRT++ K++W YI+K+ QDP NKR II D+ L VF + T +MF
Sbjct: 15 VSKELSEVIGSGPMPRTQVTKKIWDYIKKHKRQDPENKRNIIPDEKLAKVFGSKMTINMF 74
Query: 238 KMNKLLAKHI 247
+M K + KH+
Sbjct: 75 EMTKKVNKHL 84
Score = 38.5 bits (88), Expect = 4.9, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 272 ESGPSSVIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLREL 331
ES + +S+ L++ +G+G M + + TK++W+YIK + +DP N I+ D KL ++
Sbjct: 7 ESFMKPMTVSKELSEVIGSG--PMPRTQVTKKIWDYIKKHKRQDPENKRNIIPDEKLAKV 64
Query: 332 LG 333
G
Sbjct: 65 FG 66
>gi|170058412|ref|XP_001864911.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167877491|gb|EDS40874.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 251
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 44/77 (57%)
Query: 172 GLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFET 231
G + +SPEL A+ G A+PR E+VK++WA I++ NL DP NK+ ICD L+ V
Sbjct: 174 GYTRPYNLSPELAAICGAEALPRHEVVKKVWAIIKERNLYDPKNKQYAICDSELQKVIGV 233
Query: 232 DCTDMFKMNKLLAKHII 248
F M K L H +
Sbjct: 234 KRFRTFGMLKYLKPHFL 250
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 291 GGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNH 350
G + + E K+VW IK +L DP N +CD++L++++G + G+ + L + H
Sbjct: 190 GAEALPRHEVVKKVWAIIKERNLYDPKNKQYAICDSELQKVIGVKRFRTFGMLKYL-KPH 248
Query: 351 FL 352
FL
Sbjct: 249 FL 250
>gi|120613258|ref|YP_972936.1| DNA topoisomerase III [Acidovorax citrulli AAC00-1]
gi|120591722|gb|ABM35162.1| DNA topoisomerase III [Acidovorax citrulli AAC00-1]
Length = 982
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 42/68 (61%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
S L AV+G + R E VK++W YI+ +NLQDP +KR I D LR VF + MF++
Sbjct: 910 SAALAAVIGPEPIGRPEAVKKMWEYIKAHNLQDPKDKRTIKADAKLREVFGKESAGMFEL 969
Query: 240 NKLLAKHI 247
+L KH+
Sbjct: 970 AGILGKHL 977
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 299 EATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARN 349
EA K++WEYIK ++L+DP + I DAKLRE+ G ES + +L ++
Sbjct: 926 EAVKKMWEYIKAHNLQDPKDKRTIKADAKLREVFGKESAGMFELAGILGKH 976
>gi|195015029|ref|XP_001984125.1| GH16267 [Drosophila grimshawi]
gi|193897607|gb|EDV96473.1| GH16267 [Drosophila grimshawi]
Length = 254
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%)
Query: 172 GLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFET 231
G + +SPEL A++G ++PR E+VK++WA I++ +L DP NK+ ICDD L V +
Sbjct: 176 GFTRAYNLSPELSALMGADSLPRHEVVKKVWAIIKERDLYDPKNKQFAICDDELMKVMKI 235
Query: 232 DCTDMFKMNKLLAKHII 248
F M K L H +
Sbjct: 236 KRFRTFGMLKHLKPHFL 252
>gi|373854316|ref|ZP_09597114.1| SWIB/MDM2 domain-containing protein [Opitutaceae bacterium TAV5]
gi|372472183|gb|EHP32195.1| SWIB/MDM2 domain-containing protein [Opitutaceae bacterium TAV5]
Length = 77
Score = 64.7 bits (156), Expect = 6e-08, Method: Composition-based stats.
Identities = 35/66 (53%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 183 LQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCT-DMFKMNK 241
L AVVG +PRTE+ K+LW YI+KN LQDP K KI D AL+ VF T MF+M K
Sbjct: 10 LAAVVGAKPLPRTELTKKLWEYIKKNKLQDPKEKTKINADAALKAVFNGKKTVTMFEMTK 69
Query: 242 LLAKHI 247
L++ H+
Sbjct: 70 LVSGHL 75
>gi|226498430|ref|NP_001143368.1| uncharacterized protein LOC100275998 [Zea mays]
gi|195619068|gb|ACG31364.1| hypothetical protein [Zea mays]
gi|223975083|gb|ACN31729.1| unknown [Zea mays]
gi|413942035|gb|AFW74684.1| hypothetical protein ZEAMMB73_000211 [Zea mays]
Length = 143
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 47/70 (67%), Gaps = 2/70 (2%)
Query: 179 VSPELQAVVGQPA-MPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFET-DCTDM 236
+S EL+ VG A +PRTE +K +WA+I+ NNLQDP+NK+ IICD+ L+ +F D
Sbjct: 71 ISTELREFVGGAAELPRTEAIKLVWAHIKGNNLQDPNNKKIIICDEKLKKIFGGRDRVGF 130
Query: 237 FKMNKLLAKH 246
+++ LL H
Sbjct: 131 LEISGLLNPH 140
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLG 333
IS L +F+G G E+ + EA K VW +IK N+L+DP N +I+CD KL+++ G
Sbjct: 71 ISTELREFVG-GAAELPRTEAIKLVWAHIKGNNLQDPNNKKIIICDEKLKKIFG 123
>gi|345490916|ref|XP_001607941.2| PREDICTED: upstream activation factor subunit spp27-like [Nasonia
vitripennis]
Length = 265
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 41/70 (58%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+SPEL A+VG MPR E+VK+LW+ I++ L DP NK+ ICDD L V F
Sbjct: 195 LSPELAALVGAKQMPRYEVVKKLWSIIKERKLYDPKNKQFAICDDDLFKVIGVKRFRTFG 254
Query: 239 MNKLLAKHII 248
M K L H +
Sbjct: 255 MMKYLKDHFV 264
Score = 44.7 bits (104), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 290 TGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARN 349
G ++M + E K++W IK L DP N +CD L +++G + G+ + L ++
Sbjct: 203 VGAKQMPRYEVVKKLWSIIKERKLYDPKNKQFAICDDDLFKVIGVKRFRTFGMMKYL-KD 261
Query: 350 HFL 352
HF+
Sbjct: 262 HFV 264
>gi|282891548|ref|ZP_06300039.1| hypothetical protein pah_c180o026 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|338174870|ref|YP_004651680.1| DNA topoisomerase 1 [Parachlamydia acanthamoebae UV-7]
gi|281498516|gb|EFB40844.1| hypothetical protein pah_c180o026 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|336479228|emb|CCB85826.1| DNA topoisomerase 1 [Parachlamydia acanthamoebae UV-7]
Length = 864
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFET-DCTDMF 237
+SPEL VVG M R +++K++W YIR + LQD +NKR+I D L VF + DMF
Sbjct: 791 LSPELAQVVGANEMSRGDVMKKVWDYIRAHQLQDSANKRQINPDATLAKVFGGPEPMDMF 850
Query: 238 KMNKLLAKHI 247
KM +L KHI
Sbjct: 851 KMTAVLGKHI 860
>gi|326319333|ref|YP_004237005.1| DNA topoisomerase III [Acidovorax avenae subsp. avenae ATCC 19860]
gi|323376169|gb|ADX48438.1| DNA topoisomerase III [Acidovorax avenae subsp. avenae ATCC 19860]
Length = 982
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 42/68 (61%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
S L AV+G + R E VK++W YI+ +NLQDP +KR I D LR VF + MF++
Sbjct: 910 SAALAAVIGPEPVGRPEAVKKMWEYIKAHNLQDPKDKRTINADAKLREVFGKESAGMFEL 969
Query: 240 NKLLAKHI 247
+L KH+
Sbjct: 970 AGILGKHL 977
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 299 EATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARN 349
EA K++WEYIK ++L+DP + I DAKLRE+ G ES + +L ++
Sbjct: 926 EAVKKMWEYIKAHNLQDPKDKRTINADAKLREVFGKESAGMFELAGILGKH 976
>gi|195336952|ref|XP_002035097.1| GM14512 [Drosophila sechellia]
gi|194128190|gb|EDW50233.1| GM14512 [Drosophila sechellia]
Length = 111
Score = 64.7 bits (156), Expect = 7e-08, Method: Composition-based stats.
Identities = 31/77 (40%), Positives = 47/77 (61%)
Query: 172 GLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFET 231
G + +SPEL A++G+ ++PR E+VK++WA I++ +L DP NK+ ICDD L V +
Sbjct: 34 GFTRAYNLSPELSALMGESSLPRHEVVKKVWAIIKERDLYDPKNKQFAICDDELMKVMKI 93
Query: 232 DCTDMFKMNKLLAKHII 248
F M K L H +
Sbjct: 94 RRFRTFGMLKHLKPHFL 110
>gi|221056991|ref|XP_002259633.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
gi|193809705|emb|CAQ40407.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
Length = 140
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 162 VGAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIIC 221
+ AK + P GL C + L+ + R ++K W YI+ NNLQ+P+ KRKII
Sbjct: 50 INAKEKK-PNGLQIDCEIKSPLKEFLNTDTASRVFVLKYAWKYIKDNNLQNPNTKRKIIP 108
Query: 222 DDALRVVFETDCTDMFKMNKLLAKHI 247
D+ L+ V E D DM ++ KLL +H+
Sbjct: 109 DEKLKNVLEKDEVDMLEVPKLLFRHM 134
>gi|395009905|ref|ZP_10393351.1| SWIB domain-containing protein possibly involved in chromatin
remodeling, partial [Acidovorax sp. CF316]
gi|394312030|gb|EJE49281.1| SWIB domain-containing protein possibly involved in chromatin
remodeling, partial [Acidovorax sp. CF316]
Length = 59
Score = 64.7 bits (156), Expect = 7e-08, Method: Composition-based stats.
Identities = 28/54 (51%), Positives = 37/54 (68%)
Query: 194 RTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHI 247
R E VK+LW YI+ NNLQDP +KR I+ DD LR VF D MF++ +L +H+
Sbjct: 5 RPEAVKKLWEYIKANNLQDPKDKRTIVADDKLRAVFGKDSAGMFELAGILGQHL 58
Score = 44.7 bits (104), Expect = 0.073, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 33/53 (62%)
Query: 297 QAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARN 349
+ EA K++WEYIK N+L+DP + I+ D KLR + G +S + +L ++
Sbjct: 5 RPEAVKKLWEYIKANNLQDPKDKRTIVADDKLRAVFGKDSAGMFELAGILGQH 57
>gi|302505777|ref|XP_003014595.1| hypothetical protein ARB_07157 [Arthroderma benhamiae CBS 112371]
gi|302652879|ref|XP_003018279.1| hypothetical protein TRV_07729 [Trichophyton verrucosum HKI 0517]
gi|291178416|gb|EFE34206.1| hypothetical protein ARB_07157 [Arthroderma benhamiae CBS 112371]
gi|291181905|gb|EFE37634.1| hypothetical protein TRV_07729 [Trichophyton verrucosum HKI 0517]
Length = 199
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 43/60 (71%)
Query: 192 MPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLE 251
+ R + VK++W YIR++ LQDP+++R+I CDD +R VF+ D MF M K+L +++ LE
Sbjct: 139 LSRPQTVKKVWEYIREHELQDPNDRRQIRCDDLMRPVFKQDRIHMFTMTKVLNQNLYDLE 198
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 50/99 (50%), Gaps = 8/99 (8%)
Query: 253 TKESSKRFKPDAESTTEGMESGPSSVIISEALAKFLGTGGREMLQAEATKRVWEYIKVNH 312
T +++K+ K +S +G +E+ + TGG + + + K+VWEYI+ +
Sbjct: 105 TSKTAKKVKASDDSDVDGS--------AAESKKEVNRTGGFHLSRPQTVKKVWEYIREHE 156
Query: 313 LEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNHF 351
L+DP + I CD +R + + I + ++L +N +
Sbjct: 157 LQDPNDRRQIRCDDLMRPVFKQDRIHMFTMTKVLNQNLY 195
>gi|383851816|ref|XP_003701427.1| PREDICTED: upstream activation factor subunit spp27-like [Megachile
rotundata]
Length = 262
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 41/70 (58%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+SPEL AVVG M R E+VK++W+ I++ NL DP NK+ ICDD L V F
Sbjct: 192 LSPELAAVVGAEQMARHEVVKKVWSIIKERNLYDPKNKQFAICDDELMKVIGVKRFRTFG 251
Query: 239 MNKLLAKHII 248
M K L H +
Sbjct: 252 MMKYLKNHFV 261
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 290 TGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARN 349
G +M + E K+VW IK +L DP N +CD +L +++G + G+ + L +N
Sbjct: 200 VGAEQMARHEVVKKVWSIIKERNLYDPKNKQFAICDDELMKVIGVKRFRTFGMMKYL-KN 258
Query: 350 HFL 352
HF+
Sbjct: 259 HFV 261
>gi|329901025|ref|ZP_08272670.1| hypothetical protein IMCC9480_929 [Oxalobacteraceae bacterium
IMCC9480]
gi|327549272|gb|EGF33848.1| hypothetical protein IMCC9480_929 [Oxalobacteraceae bacterium
IMCC9480]
Length = 124
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDC-TDMFK 238
S L AVVG +PRTE+ K++W YI+KN LQD +NKR I D L +F MF+
Sbjct: 55 SATLAAVVGADPLPRTEVTKKVWEYIKKNALQDDANKRMINGDAKLVAIFGGKKQVSMFE 114
Query: 239 MNKLLAKHI 247
M KL++ H+
Sbjct: 115 MTKLISDHL 123
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 24/37 (64%)
Query: 297 QAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLG 333
+ E TK+VWEYIK N L+D N +I DAKL + G
Sbjct: 69 RTEVTKKVWEYIKKNALQDDANKRMINGDAKLVAIFG 105
>gi|409408941|ref|ZP_11257376.1| hypothetical protein GWL_45310 [Herbaspirillum sp. GW103]
gi|386432263|gb|EIJ45091.1| hypothetical protein GWL_45310 [Herbaspirillum sp. GW103]
Length = 158
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF-ETDCTDMFK 238
S L VVG +PRTE+ K++W YI+K+ LQ+ NKR I DD L+ +F MF+
Sbjct: 89 SAALGEVVGAKPLPRTEVTKKVWEYIKKHKLQNAENKRNIDADDKLKAIFGGKKQVTMFE 148
Query: 239 MNKLLAKHI 247
M KL++ H+
Sbjct: 149 MTKLISAHL 157
Score = 37.7 bits (86), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 291 GGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLG 333
G + + + E TK+VWEYIK + L++ N I D KL+ + G
Sbjct: 97 GAKPLPRTEVTKKVWEYIKKHKLQNAENKRNIDADDKLKAIFG 139
>gi|385305614|gb|EIF49575.1| swib domain-containing protein [Dekkera bruxellensis AWRI1499]
Length = 190
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 49/71 (69%), Gaps = 2/71 (2%)
Query: 179 VSPELQAVVGQPA-MPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMF 237
++PEL +G + R + ++ +W YI++NNLQ+P N+++I+CDD ++ +F D MF
Sbjct: 50 ITPELARFLGTTEQVSRVDAIRIMWKYIKENNLQNPKNRKEILCDDRMKPIF-GDKIGMF 108
Query: 238 KMNKLLAKHII 248
+ +K+++KH I
Sbjct: 109 ETSKVISKHFI 119
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISA 339
I+ LA+FLGT ++ + +A + +W+YIK N+L++P N ILCD +++ + G + I
Sbjct: 50 ITPELARFLGTT-EQVSRVDAIRIMWKYIKENNLQNPKNRKEILCDDRMKPIFG-DKIGM 107
Query: 340 LGIQEMLARNHFLR 353
+++++ HF+R
Sbjct: 108 FETSKVISK-HFIR 120
>gi|389613335|dbj|BAM20025.1| similar to CG1240, partial [Papilio xuthus]
Length = 190
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 44/69 (63%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+SP L ++G+ MPR E+VK++WA +++ L DP+NK+ ICDDA+ VF T +F
Sbjct: 119 LSPALAELMGEDEMPRHEVVKRVWAIVKERKLYDPNNKQFAICDDAMYKVFGTKRFRIFG 178
Query: 239 MNKLLAKHI 247
M K L H
Sbjct: 179 MMKHLKTHF 187
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISA 339
+S ALA+ +G EM + E KRVW +K L DP N +CD + ++ G +
Sbjct: 119 LSPALAELMGED--EMPRHEVVKRVWAIVKERKLYDPNNKQFAICDDAMYKVFGTKRFRI 176
Query: 340 LGIQEMLARNHF 351
G+ + L + HF
Sbjct: 177 FGMMKHL-KTHF 187
>gi|157133783|ref|XP_001663011.1| hypothetical protein AaeL_AAEL012865 [Aedes aegypti]
gi|108870706|gb|EAT34931.1| AAEL012865-PA [Aedes aegypti]
Length = 271
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 43/77 (55%)
Query: 172 GLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFET 231
G + +SPEL A+ G A+PR E+VK++W I++ NL DP NK+ ICD L+ V
Sbjct: 194 GFTRPYNLSPELAAICGADALPRHEVVKKVWTIIKERNLYDPKNKQYAICDSELQKVIGV 253
Query: 232 DCTDMFKMNKLLAKHII 248
F M K L H +
Sbjct: 254 KRFRTFGMLKYLKPHFL 270
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 299 EATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNHFL 352
E K+VW IK +L DP N +CD++L++++G + G+ + L + HFL
Sbjct: 218 EVVKKVWTIIKERNLYDPKNKQYAICDSELQKVIGVKRFRTFGMLKYL-KPHFL 270
>gi|195439808|ref|XP_002067751.1| GK12593 [Drosophila willistoni]
gi|194163836|gb|EDW78737.1| GK12593 [Drosophila willistoni]
Length = 246
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 45/77 (58%)
Query: 172 GLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFET 231
G + +SPEL A++G ++PR E+VK++WA I++ +L DP NK+ ICDD L +
Sbjct: 169 GFTRAYNLSPELSALMGADSLPRHEVVKKVWAIIKERDLYDPKNKQFAICDDELMKIMNI 228
Query: 232 DCTDMFKMNKLLAKHII 248
F M K L H +
Sbjct: 229 RRFRTFGMLKHLKPHFL 245
>gi|255565970|ref|XP_002523973.1| brg-1 associated factor, putative [Ricinus communis]
gi|223536700|gb|EEF38341.1| brg-1 associated factor, putative [Ricinus communis]
Length = 134
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 172 GLNKVCGVSPELQAVVGQ-PAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFE 230
G+ K VSP L +G P RT++VK++W +I+ +NLQ+P+NK++I CD+ L+ +F+
Sbjct: 53 GILKAAPVSPALSEFLGGVPEASRTDVVKKIWDHIKLHNLQNPTNKKEIFCDEKLKTIFD 112
Query: 231 -TDCTDMFKMNKLLAKHII 248
+ ++ KLL++H +
Sbjct: 113 GKEKVGFLEIGKLLSRHFV 131
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 50/77 (64%), Gaps = 3/77 (3%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELL-GCESIS 338
+S AL++FLG G E + + K++W++IK+++L++P N I CD KL+ + G E +
Sbjct: 60 VSPALSEFLG-GVPEASRTDVVKKIWDHIKLHNLQNPTNKKEIFCDEKLKTIFDGKEKVG 118
Query: 339 ALGIQEMLARNHFLRQS 355
L I ++L+R HF++
Sbjct: 119 FLEIGKLLSR-HFVKSG 134
>gi|296004558|ref|XP_002808698.1| conserved Plasmodium protein, unknown function [Plasmodium
falciparum 3D7]
gi|225631685|emb|CAX63969.1| conserved Plasmodium protein, unknown function [Plasmodium
falciparum 3D7]
Length = 131
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%)
Query: 166 RRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDAL 225
++ P GL C + L+ + R ++K W YI+ NNLQ+P+ KRKII DD L
Sbjct: 44 KKKRPNGLQIDCEIKSPLKEFLNADTASRVFVLKYAWKYIKDNNLQNPNMKRKIIPDDKL 103
Query: 226 RVVFETDCTDMFKMNKLLAKHI 247
+ V + D D+ ++ KLL KH+
Sbjct: 104 KQVLDKDEVDILEVPKLLFKHM 125
>gi|323456522|gb|EGB12389.1| hypothetical protein AURANDRAFT_61149 [Aureococcus anophagefferens]
Length = 1875
Score = 63.9 bits (154), Expect = 1e-07, Method: Composition-based stats.
Identities = 42/126 (33%), Positives = 62/126 (49%), Gaps = 12/126 (9%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+S + AVVG +VK LW YI+K++LQ+P+NK +I+CD AL+ F+ D F
Sbjct: 219 LSDAMAAVVGVGRANHFRLVKLLWKYIKKHDLQNPANKNEIVCDAALKAAFKKDKVTSFG 278
Query: 239 MNKLLAKHI-------IPLEPTK-----ESSKRFKPDAESTTEGMESGPSSVIISEALAK 286
M+KLL+ H+ + P E S + DAE +E P + LA
Sbjct: 279 MSKLLSAHMHREHDSFLARAPVVDYAELERSDVDESDAEDVAGAVEDTPRTRRAFSELAD 338
Query: 287 FLGTGG 292
+L G
Sbjct: 339 YLAAKG 344
Score = 45.1 bits (105), Expect = 0.054, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 272 ESGPSSVIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLREL 331
E P ++S+A+A +G G + K +W+YIK + L++P N I+CDA L+
Sbjct: 211 EEDPRHPVLSDAMAAVVGVGRANHFRL--VKLLWKYIKKHDLQNPANKNEIVCDAALKAA 268
Query: 332 LGCESISALGIQEMLA 347
+ +++ G+ ++L+
Sbjct: 269 FKKDKVTSFGMSKLLS 284
>gi|66525165|ref|XP_392065.2| PREDICTED: upstream activation factor subunit spp27-like [Apis
mellifera]
gi|380016161|ref|XP_003692057.1| PREDICTED: upstream activation factor subunit spp27-like [Apis
florea]
Length = 261
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 41/70 (58%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+SPEL AVVG M R E+VK++W+ I++ NL DP NK+ +CDD L V F
Sbjct: 191 LSPELAAVVGAEQMARHEVVKKIWSIIKERNLYDPKNKQYALCDDELLKVIGVKRFRTFG 250
Query: 239 MNKLLAKHII 248
M K L H +
Sbjct: 251 MMKYLKNHFV 260
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 290 TGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARN 349
G +M + E K++W IK +L DP N LCD +L +++G + G+ + L +N
Sbjct: 199 VGAEQMARHEVVKKIWSIIKERNLYDPKNKQYALCDDELLKVIGVKRFRTFGMMKYL-KN 257
Query: 350 HFL 352
HF+
Sbjct: 258 HFV 260
>gi|443691868|gb|ELT93618.1| hypothetical protein CAPTEDRAFT_227075 [Capitella teleta]
Length = 190
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 165 KRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDA 224
KRR G K C +SP L V+G M R+++VK++W +R+ LQDP ++ + CD+
Sbjct: 107 KRRNG---YMKECILSPALADVMGTDRMARSDVVKRMWEIVRERELQDPKQRQYMRCDEQ 163
Query: 225 LRVVFETDCTDMFKMNKLLAKHIIPLE 251
L+ VF F M K L HI E
Sbjct: 164 LQKVFGRKRVRTFGMMKYLTSHITKAE 190
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 11/101 (10%)
Query: 256 SSKRFKPDAESTTEGMESGPS---------SVIISEALAKFLGTGGREMLQAEATKRVWE 306
S+KR K + T + G S I+S ALA +GT M +++ KR+WE
Sbjct: 85 SAKRTKRGEKKTKSKSDDGSSPKRRNGYMKECILSPALADVMGTD--RMARSDVVKRMWE 142
Query: 307 YIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLA 347
++ L+DP + CD +L+++ G + + G+ + L
Sbjct: 143 IVRERELQDPKQRQYMRCDEQLQKVFGRKRVRTFGMMKYLT 183
>gi|194749288|ref|XP_001957071.1| GF24247 [Drosophila ananassae]
gi|190624353|gb|EDV39877.1| GF24247 [Drosophila ananassae]
Length = 247
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%)
Query: 172 GLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFET 231
G + +SPEL A++G ++PR E+VK++WA I++ +L DP NK+ ICDD L V +
Sbjct: 170 GFTRAYNLSPELSALMGAQSLPRHEVVKKVWAIIKERDLYDPKNKQFAICDDELMKVMKI 229
Query: 232 DCTDMFKMNKLLAKHII 248
F M K L H +
Sbjct: 230 RRFRTFGMLKHLKPHFL 246
>gi|224123994|ref|XP_002319215.1| predicted protein [Populus trichocarpa]
gi|222857591|gb|EEE95138.1| predicted protein [Populus trichocarpa]
Length = 126
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Query: 168 GGPGGLNKVCGVSPELQAVVGQ-PAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALR 226
G P G+ K VSP L +G P R E VK++WA+I+ +NLQ+P+NK++IICD L+
Sbjct: 41 GTPRGILKPNPVSPVLGDFLGGVPESSRAEAVKKIWAHIKLHNLQNPTNKKEIICDAKLK 100
Query: 227 VVFET-DCTDMFKMNKLLAKHI 247
+F+ D + KLL+ H
Sbjct: 101 AIFDGRDKVGFLDIGKLLSAHF 122
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 68/122 (55%), Gaps = 13/122 (10%)
Query: 236 MFKMNKLLAKHIIPLEPTKESSKRFKPDAE--STTEGMESG---PSSVIISEALAKFLGT 290
+FK + L + P +P S KP A+ STT G G P+ V S L FLG
Sbjct: 8 VFKACRAL---LAPAKPATASKTTPKPKAKATSTTPGTPRGILKPNPV--SPVLGDFLG- 61
Query: 291 GGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELL-GCESISALGIQEMLARN 349
G E +AEA K++W +IK+++L++P N I+CDAKL+ + G + + L I ++L+
Sbjct: 62 GVPESSRAEAVKKIWAHIKLHNLQNPTNKKEIICDAKLKAIFDGRDKVGFLDIGKLLS-A 120
Query: 350 HF 351
HF
Sbjct: 121 HF 122
>gi|332018104|gb|EGI58718.1| Upstream activation factor subunit spp27 [Acromyrmex echinatior]
Length = 334
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 41/70 (58%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+SPEL AVVG M R E+VK++W+ I++ NL DP NK+ ICD+ L V F
Sbjct: 264 LSPELAAVVGAEQMARHEVVKKVWSIIKERNLYDPKNKQFAICDEELMKVIGVKRFRTFG 323
Query: 239 MNKLLAKHII 248
M K L H +
Sbjct: 324 MMKYLKNHFV 333
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 290 TGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARN 349
G +M + E K+VW IK +L DP N +CD +L +++G + G+ + L +N
Sbjct: 272 VGAEQMARHEVVKKVWSIIKERNLYDPKNKQFAICDEELMKVIGVKRFRTFGMMKYL-KN 330
Query: 350 HFL 352
HF+
Sbjct: 331 HFV 333
>gi|296083088|emb|CBI22492.3| unnamed protein product [Vitis vinifera]
Length = 68
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 38/47 (80%)
Query: 183 LQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF 229
+Q +G P +PRT+ +KQ+WAYI+++NLQDP NK+ I+CD+ L+ +F
Sbjct: 1 MQDFLGVPEIPRTQALKQIWAYIKQHNLQDPENKKIIVCDEKLKSIF 47
Score = 44.3 bits (103), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Query: 287 FLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELL-GCESISALGIQEM 345
FLG E+ + +A K++W YIK ++L+DP N +I+CD KL+ + G + + L I +
Sbjct: 4 FLGVP--EIPRTQALKQIWAYIKQHNLQDPENKKIIVCDEKLKSIFAGKDRVGFLEIAGL 61
Query: 346 LARNHFLR 353
+ HFL+
Sbjct: 62 I-NPHFLK 68
>gi|302809001|ref|XP_002986194.1| hypothetical protein SELMODRAFT_123621 [Selaginella moellendorffii]
gi|300146053|gb|EFJ12725.1| hypothetical protein SELMODRAFT_123621 [Selaginella moellendorffii]
Length = 93
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 44/72 (61%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISA 339
IS L +FLGT ++ + E TK++W+YIK N L+DP + ILCD KL +LL C+S +
Sbjct: 17 ISPKLREFLGTEESQLSRPEVTKQLWDYIKSNQLQDPSDRRKILCDEKLEKLLDCKSFNG 76
Query: 340 LGIQEMLARNHF 351
G L + H
Sbjct: 77 FGGLPKLLQAHL 88
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%), Gaps = 3/72 (4%)
Query: 179 VSPELQAVVG--QPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDM 236
+SP+L+ +G + + R E+ KQLW YI+ N LQDPS++RKI+CD+ L + + +
Sbjct: 17 ISPKLREFLGTEESQLSRPEVTKQLWDYIKSNQLQDPSDRRKILCDEKLEKLLDCKSFNG 76
Query: 237 F-KMNKLLAKHI 247
F + KLL H+
Sbjct: 77 FGGLPKLLQAHL 88
>gi|391231698|ref|ZP_10267904.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Opitutaceae bacterium TAV1]
gi|391221359|gb|EIP99779.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Opitutaceae bacterium TAV1]
Length = 91
Score = 63.2 bits (152), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/66 (53%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 183 LQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCT-DMFKMNK 241
L AVVG +PRTE+ K+LW YI+KN LQDP K KI D AL+ VF T MF+M K
Sbjct: 24 LAAVVGAKPLPRTELTKKLWEYIKKNKLQDPKEKTKINADAALKAVFNGKKTVTMFEMTK 83
Query: 242 LLAKHI 247
L++ H+
Sbjct: 84 LVSGHL 89
>gi|428169722|gb|EKX38653.1| hypothetical protein GUITHDRAFT_144048 [Guillardia theta CCMP2712]
Length = 297
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF-ETDCTDMFK 238
S L +G P+ RTE+VK +W Y+++N+LQD +KR I+ D+ L +F + MFK
Sbjct: 166 SEGLANFMGAPSGKRTEVVKAIWDYVKQNDLQDAKDKRFIMVDEKLEQIFGKRKRVHMFK 225
Query: 239 MNKLLAKHIIPLEPTKESSKRFK-----PDAESTTE 269
MN+LL+ H ++ S FK DAE E
Sbjct: 226 MNQLLSPHFGQRCGAEDESGTFKVEEHEGDAEQEEE 261
Score = 44.3 bits (103), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 6/60 (10%)
Query: 276 SSVIISEALAKFLG--TGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLG 333
S SE LA F+G +G R E K +W+Y+K N L+D + I+ D KL ++ G
Sbjct: 161 GSNWFSEGLANFMGAPSGKR----TEVVKAIWDYVKQNDLQDAKDKRFIMVDEKLEQIFG 216
>gi|225165980|ref|ZP_03727735.1| conserved hypothetical protein [Diplosphaera colitermitum TAV2]
gi|224799776|gb|EEG18250.1| conserved hypothetical protein [Diplosphaera colitermitum TAV2]
Length = 90
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/66 (51%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 183 LQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCT-DMFKMNK 241
L AVVG +PRTE+ K+LW YI+KNNLQD K I DD L+ VF T MF+M K
Sbjct: 23 LAAVVGAKPLPRTELTKKLWEYIKKNNLQDKKVKTNINADDKLKAVFNGKKTVSMFEMTK 82
Query: 242 LLAKHI 247
L++ H+
Sbjct: 83 LVSGHL 88
>gi|337294185|emb|CCB92169.1| DNA topoisomerase 1 [Waddlia chondrophila 2032/99]
Length = 854
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 178 GVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF-ETDCTDM 236
+SPEL +VG R + +K +WAYI+ N LQDP NKR I D+ L VF + DM
Sbjct: 780 ALSPELAEIVGSHEATRGDALKSVWAYIKSNKLQDPENKRVIKPDEKLGKVFGNMEPVDM 839
Query: 237 FKMNKLLAKHI 247
FK+ +L++HI
Sbjct: 840 FKIAGILSQHI 850
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 25/44 (56%)
Query: 290 TGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLG 333
G E + +A K VW YIK N L+DP N VI D KL ++ G
Sbjct: 789 VGSHEATRGDALKSVWAYIKSNKLQDPENKRVIKPDEKLGKVFG 832
>gi|297621926|ref|YP_003710063.1| DNA topoisomerase I [Waddlia chondrophila WSU 86-1044]
gi|297377227|gb|ADI39057.1| DNA topoisomerase I [Waddlia chondrophila WSU 86-1044]
Length = 854
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 178 GVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF-ETDCTDM 236
+SPEL +VG R + +K +WAYI+ N LQDP NKR I D+ L VF + DM
Sbjct: 780 ALSPELAEIVGSHEATRGDALKSVWAYIKSNKLQDPENKRVIKPDEKLGKVFGNMEPVDM 839
Query: 237 FKMNKLLAKHI 247
FK+ +L++HI
Sbjct: 840 FKIAGILSQHI 850
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 25/44 (56%)
Query: 290 TGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLG 333
G E + +A K VW YIK N L+DP N VI D KL ++ G
Sbjct: 789 VGSHEATRGDALKSVWAYIKSNKLQDPENKRVIKPDEKLGKVFG 832
>gi|347972011|ref|XP_001237540.3| AGAP004492-PA [Anopheles gambiae str. PEST]
gi|333469130|gb|EAU76871.3| AGAP004492-PA [Anopheles gambiae str. PEST]
Length = 289
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 43/76 (56%)
Query: 172 GLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFET 231
G + +SPEL V G ++PR E+VK++WA I++ NL DP N++ ICD+ LR V
Sbjct: 212 GYTRPYTLSPELAEVCGAESLPRHEVVKKMWAIIKERNLYDPKNRQFAICDEQLRKVIGV 271
Query: 232 DCTDMFKMNKLLAKHI 247
F M K L H
Sbjct: 272 KRFRTFGMLKYLKPHF 287
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 291 GGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNH 350
G + + E K++W IK +L DP N +CD +LR+++G + G+ + L + H
Sbjct: 228 GAESLPRHEVVKKMWAIIKERNLYDPKNRQFAICDEQLRKVIGVKRFRTFGMLKYL-KPH 286
Query: 351 F 351
F
Sbjct: 287 F 287
>gi|307172235|gb|EFN63752.1| Upstream activation factor subunit UAF30 [Camponotus floridanus]
Length = 262
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 41/70 (58%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+SPEL AVVG M R E+VK++W+ I++ NL DP NK+ ICD+ L V F
Sbjct: 192 LSPELAAVVGAEQMARHEVVKKVWSIIKERNLYDPKNKQFAICDEELMKVIGVKRFRTFG 251
Query: 239 MNKLLAKHII 248
M K L H +
Sbjct: 252 MMKYLKNHFV 261
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 290 TGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARN 349
G +M + E K+VW IK +L DP N +CD +L +++G + G+ + L +N
Sbjct: 200 VGAEQMARHEVVKKVWSIIKERNLYDPKNKQFAICDEELMKVIGVKRFRTFGMMKYL-KN 258
Query: 350 HFL 352
HF+
Sbjct: 259 HFV 261
>gi|237749053|ref|ZP_04579533.1| SWIB/MDM2 domain-containing protein [Oxalobacter formigenes OXCC13]
gi|229380415|gb|EEO30506.1| SWIB/MDM2 domain-containing protein [Oxalobacter formigenes OXCC13]
Length = 128
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 183 LQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF-ETDCTDMFKMNK 241
L A+VG +PRTE+ K++W YI+K NLQD N+R I DD L+ VF MF+M K
Sbjct: 62 LAAIVGAAPLPRTEVTKKVWDYIKKYNLQDKDNRRMINADDKLKPVFGGKKQVSMFEMTK 121
Query: 242 LLAKHI 247
L++ +
Sbjct: 122 LVSAQL 127
>gi|322801005|gb|EFZ21786.1| hypothetical protein SINV_05525 [Solenopsis invicta]
Length = 295
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 41/70 (58%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+SPEL AVVG M R E+V+++W+ I++ NL DP NK+ ICD+ L + F
Sbjct: 225 LSPELAAVVGAEQMARHEVVRKMWSIIKERNLYDPKNKQFAICDEELMKIIGVKRFRTFG 284
Query: 239 MNKLLAKHII 248
M K L H I
Sbjct: 285 MMKYLKNHFI 294
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 290 TGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARN 349
G +M + E +++W IK +L DP N +CD +L +++G + G+ + L +N
Sbjct: 233 VGAEQMARHEVVRKMWSIIKERNLYDPKNKQFAICDEELMKIIGVKRFRTFGMMKYL-KN 291
Query: 350 HFL 352
HF+
Sbjct: 292 HFI 294
>gi|307214555|gb|EFN89540.1| Upstream activation factor subunit UAF30 [Harpegnathos saltator]
Length = 302
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 41/70 (58%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+SPEL A+VG M R E+VK++W+ I++ NL DP NK+ ICD+ L V F
Sbjct: 232 LSPELAAIVGAEQMARHEVVKKVWSIIKERNLYDPKNKQFAICDEELMKVIGVKRFRTFG 291
Query: 239 MNKLLAKHII 248
M K L H +
Sbjct: 292 MMKYLKNHFV 301
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 277 SVIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCES 336
++ +S LA +G +M + E K+VW IK +L DP N +CD +L +++G +
Sbjct: 229 AITLSPELAAIVG--AEQMARHEVVKKVWSIIKERNLYDPKNKQFAICDEELMKVIGVKR 286
Query: 337 ISALGIQEMLARNHFL 352
G+ + L +NHF+
Sbjct: 287 FRTFGMMKYL-KNHFV 301
>gi|389584152|dbj|GAB66885.1| hypothetical protein PCYB_102350 [Plasmodium cynomolgi strain B]
Length = 140
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 45/78 (57%)
Query: 170 PGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF 229
P GL C + L+ + R ++K W YI+ NNLQ+P+ KRKII D+ L+ V
Sbjct: 57 PNGLQIDCEIKSPLKEFLNTDTASRVFVLKYAWKYIKDNNLQNPNTKRKIIPDEKLKNVL 116
Query: 230 ETDCTDMFKMNKLLAKHI 247
E D DM ++ KLL +++
Sbjct: 117 EKDEVDMLEVPKLLFRYM 134
>gi|282890289|ref|ZP_06298819.1| hypothetical protein pah_c014o183 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|338174189|ref|YP_004650999.1| hypothetical protein PUV_01950 [Parachlamydia acanthamoebae UV-7]
gi|281499946|gb|EFB42235.1| hypothetical protein pah_c014o183 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|336478547|emb|CCB85145.1| putative uncharacterized protein [Parachlamydia acanthamoebae UV-7]
Length = 97
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 177 CGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDAL-RVVFETDCTD 235
+S L+ ++G+ M RTE+ K++W YI+K+ LQD +NKR I D L +V+ D
Sbjct: 17 VNLSETLEELIGKGPMARTEVTKKVWEYIKKHKLQDATNKRNINPDAKLAKVLGSNQPID 76
Query: 236 MFKMNKLLAKHI 247
MFKM +AKH+
Sbjct: 77 MFKMTSKIAKHL 88
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 278 VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGC 334
V +SE L + +G G M + E TK+VWEYIK + L+D N I DAKL ++LG
Sbjct: 17 VNLSETLEELIGKGP--MARTEVTKKVWEYIKKHKLQDATNKRNINPDAKLAKVLGS 71
>gi|326432881|gb|EGD78451.1| hypothetical protein PTSG_09146 [Salpingoeca sp. ATCC 50818]
Length = 377
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 197 IVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHI 247
+VK LWAYI++N LQDP + R+I+CDD ++ VF + T F MNK ++ H+
Sbjct: 327 VVKLLWAYIKENGLQDPRDGRRILCDDKMKAVFPDEMT-AFSMNKFISPHL 376
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 61/150 (40%), Gaps = 34/150 (22%)
Query: 183 LQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKL 242
L +G+ M R+E+ K++WAYIR+NNL P+ K I DD L + K
Sbjct: 244 LAEFLGEKYMARSEVTKRIWAYIRENNL--PTKKGCRILDDKLSSALGRKTISFKTLPKA 301
Query: 243 LAKHIIPLEPTKESSKRFKPDAESTTEGMESGPSSVIISEALAKFLGTGGREMLQAEATK 302
L + P ++P T E + V+ K
Sbjct: 302 LKTLMKP----------YRPPETYTIEDHNTDQQPVV----------------------K 329
Query: 303 RVWEYIKVNHLEDPLNSMVILCDAKLRELL 332
+W YIK N L+DP + ILCD K++ +
Sbjct: 330 LLWAYIKENGLQDPRDGRRILCDDKMKAVF 359
>gi|152982995|ref|YP_001354676.1| hypothetical protein mma_2986 [Janthinobacterium sp. Marseille]
gi|151283072|gb|ABR91482.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
Length = 146
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDC-TDMFK 238
S L AV+G PRTE+ K++W YI+K LQ+ +NKR I D+ L+ VF MF+
Sbjct: 77 SAVLAAVIGASPAPRTEVTKKVWEYIKKFKLQNEANKRMIDADEKLKAVFGGKKQVSMFE 136
Query: 239 MNKLLAKHI 247
M KL++ H+
Sbjct: 137 MTKLISGHL 145
>gi|150866001|ref|XP_001385450.2| hypothetical protein PICST_61327 [Scheffersomyces stipitis CBS
6054]
gi|149387257|gb|ABN67421.2| predicted protein, partial [Scheffersomyces stipitis CBS 6054]
Length = 149
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 7/80 (8%)
Query: 165 KRRGGP---GGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIIC 221
KR G G NK +S EL ++G R ++VKQLW YI+ N LQ+P +KR+I+C
Sbjct: 65 KREAGTLAKTGFNKEMVLSTELSDILGISRTSRPQVVKQLWIYIKDNELQNPDDKRQIMC 124
Query: 222 DDALRVVFETD----CTDMF 237
D+ L+ +F+ C ++F
Sbjct: 125 DEKLQKLFKKSMCNFCLEIF 144
>gi|442771047|gb|AGC71745.1| DNA topoisomerase III [uncultured bacterium A1Q1_fos_504]
Length = 57
Score = 61.6 bits (148), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 192 MPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHI 247
MPRTE+ K++W YI+KN LQD NKR I D L+ +F+ MF+M KL++ H+
Sbjct: 1 MPRTEVTKKIWDYIKKNKLQDAMNKRMINADAKLKELFQKAQVSMFEMTKLVSNHL 56
Score = 46.2 bits (108), Expect = 0.024, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 295 MLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNHF 351
M + E TK++W+YIK N L+D +N +I DAKL+EL +S + ++++ NH
Sbjct: 1 MPRTEVTKKIWDYIKKNKLQDAMNKRMINADAKLKELFQKAQVSMFEMTKLVS-NHL 56
>gi|223939102|ref|ZP_03630986.1| SWIB/MDM2 domain protein [bacterium Ellin514]
gi|223892262|gb|EEF58739.1| SWIB/MDM2 domain protein [bacterium Ellin514]
Length = 96
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 182 ELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFE-TDCTDMFKMN 240
+L A++G +PR+E+ K+LW+YIRK+ LQDP K I D+ L+ VF M +M+
Sbjct: 27 KLSAIIGSKPLPRSELTKRLWSYIRKHGLQDPKKKTLINADENLKPVFNGKQQVTMLEMS 86
Query: 241 KLLAKHII 248
KL+ HI+
Sbjct: 87 KLVFSHIV 94
>gi|197105844|ref|YP_002131221.1| SWIB-domain-containing protein implicated in chromatin remodeling
[Phenylobacterium zucineum HLK1]
gi|196479264|gb|ACG78792.1| SWIB-domain-containing protein implicated in chromatin remodeling
[Phenylobacterium zucineum HLK1]
Length = 85
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF-ETDCTDMFK 238
S EL +VG + R E V ++W YI+ N LQ+P NKR+I+ D L+ +F D MF+
Sbjct: 16 SAELAQIVGAGQLSRGETVSRVWDYIKTNRLQNPQNKREIVADAKLKPIFGGKDRVSMFE 75
Query: 239 MNKLLAKHI 247
M+K L+ H+
Sbjct: 76 MSKHLSGHL 84
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 281 SEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLG 333
S LA+ +G G ++ + E RVW+YIK N L++P N I+ DAKL+ + G
Sbjct: 16 SAELAQIVGAG--QLSRGETVSRVWDYIKTNRLQNPQNKREIVADAKLKPIFG 66
>gi|149185583|ref|ZP_01863899.1| hypothetical protein ED21_21199 [Erythrobacter sp. SD-21]
gi|148830803|gb|EDL49238.1| hypothetical protein ED21_21199 [Erythrobacter sp. SD-21]
Length = 83
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 46/80 (57%)
Query: 168 GGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRV 227
G L K +SPEL+ VVG+ M R ++ ++W +I+ N+LQD ++R I DD L
Sbjct: 3 GKNNALQKPVNLSPELENVVGKGPMTRAQVTSKVWDHIKANDLQDSKDRRMINPDDKLGA 62
Query: 228 VFETDCTDMFKMNKLLAKHI 247
V + MFKM ++KH+
Sbjct: 63 VIGKEQISMFKMTGAVSKHM 82
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 278 VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESI 337
V +S L +G G M +A+ T +VW++IK N L+D + +I D KL ++G E I
Sbjct: 12 VNLSPELENVVGKG--PMTRAQVTSKVWDHIKANDLQDSKDRRMINPDDKLGAVIGKEQI 69
Query: 338 S 338
S
Sbjct: 70 S 70
>gi|415952310|ref|ZP_11557154.1| DNA topoisomerase domain protein [Herbaspirillum frisingense GSF30]
gi|407757399|gb|EKF67387.1| DNA topoisomerase domain protein [Herbaspirillum frisingense GSF30]
Length = 76
Score = 61.6 bits (148), Expect = 6e-07, Method: Composition-based stats.
Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF-ETDCTDMFK 238
S L VVG +PRTE+ K++W YI+KN LQ+ NKR I DD L+ +F MF+
Sbjct: 7 SAALGEVVGAKPLPRTEVTKKVWEYIKKNKLQNAENKRNIDADDKLKAIFGGKKQVTMFE 66
Query: 239 MNKLLAKHI 247
M KL++ H+
Sbjct: 67 MTKLISAHL 75
>gi|237746899|ref|ZP_04577379.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
gi|229378250|gb|EEO28341.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
Length = 116
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF-ETDCTDMFK 238
S L AV+G +PRTE+ K++W YI++NNLQD N+R I D L+ VF MF+
Sbjct: 47 SAVLAAVIGATPVPRTEVTKKIWDYIKQNNLQDKDNRRMINADGKLQPVFGGKKQVSMFE 106
Query: 239 MNKLLAKHI 247
M KL++ +
Sbjct: 107 MTKLVSAQL 115
Score = 41.6 bits (96), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 291 GGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLG 333
G + + E TK++W+YIK N+L+D N +I D KL+ + G
Sbjct: 55 GATPVPRTEVTKKIWDYIKQNNLQDKDNRRMINADGKLQPVFG 97
>gi|391330153|ref|XP_003739528.1| PREDICTED: upstream activation factor subunit spp27-like
[Metaseiulus occidentalis]
Length = 232
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 48/85 (56%)
Query: 163 GAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICD 222
GA + G K +SPEL AV+G+ M R +VK+++A +R+ +L DP N++ I D
Sbjct: 144 GAGGKKAKTGYMKDLKLSPELSAVMGEEHMSRNAVVKKMYAIVRERSLLDPDNRQFAILD 203
Query: 223 DALRVVFETDCTDMFKMNKLLAKHI 247
+ L+ VF MF M K L KH
Sbjct: 204 EQLQEVFGQKRVRMFGMLKHLKKHF 228
>gi|218186922|gb|EEC69349.1| hypothetical protein OsI_38464 [Oryza sativa Indica Group]
gi|222617148|gb|EEE53280.1| hypothetical protein OsJ_36231 [Oryza sativa Japonica Group]
Length = 78
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 179 VSPELQAVVGQPA-MPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFET-DCTDM 236
+S EL+ VG +PRTE +K +WA+I+ NNLQDP+NK+ I+CD+ L+ +F D
Sbjct: 6 ISAELREFVGGAEELPRTEALKIIWAHIKGNNLQDPNNKKIIVCDEKLKKIFGGRDRVGF 65
Query: 237 FKMNKLLAKHI 247
+++ LL H
Sbjct: 66 LEISGLLNPHF 76
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLG 333
IS L +F+G G E+ + EA K +W +IK N+L+DP N +I+CD KL+++ G
Sbjct: 6 ISAELREFVG-GAEELPRTEALKIIWAHIKGNNLQDPNNKKIIVCDEKLKKIFG 58
>gi|326491561|dbj|BAJ94258.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 146
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFET-DCTDMF 237
VS L G P + R+ ++K +W Y++ N+LQ+P+NK++IICD+ L+ +F+ + M
Sbjct: 73 VSDALSKFGGAPNISRSGVLKIVWDYVKANSLQNPANKKEIICDEKLKTIFDGRNTVHMT 132
Query: 238 KMNKLLAKHII 248
++ KLL+ H +
Sbjct: 133 EVTKLLSPHFV 143
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 46/77 (59%), Gaps = 4/77 (5%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELL-GCESIS 338
+S+AL+KF G + ++ K VW+Y+K N L++P N I+CD KL+ + G ++
Sbjct: 73 VSDALSKF--GGAPNISRSGVLKIVWDYVKANSLQNPANKKEIICDEKLKTIFDGRNTVH 130
Query: 339 ALGIQEMLARNHFLRQS 355
+ ++L+ HF++ +
Sbjct: 131 MTEVTKLLSP-HFVKST 146
>gi|190349062|gb|EDK41642.2| hypothetical protein PGUG_05740 [Meyerozyma guilliermondii ATCC
6260]
Length = 185
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 42/68 (61%)
Query: 163 GAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICD 222
GA + G N+ +S +LQ V+G+ R +VK LWAYI+ +LQ+P +KR+I CD
Sbjct: 113 GATKPPSKTGFNREMALSSQLQEVIGEEKCSRPRVVKLLWAYIKDRDLQNPQDKRQINCD 172
Query: 223 DALRVVFE 230
+ L +F+
Sbjct: 173 EKLTALFK 180
>gi|46445705|ref|YP_007070.1| DNA topoisomerase I/SWI domain fusion protein [Candidatus
Protochlamydia amoebophila UWE25]
gi|46399346|emb|CAF22795.1| putative DNA topoisomerase I [Candidatus Protochlamydia amoebophila
UWE25]
Length = 867
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 176 VCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF-ETDCT 234
V VSPEL+ ++ + R ++ K++W YI+ + LQD +NKR II D L VF T
Sbjct: 793 VYQVSPELRGIIEVSEITRGDMTKKVWDYIKTHQLQDTNNKRLIIPDAKLSQVFGTTQPV 852
Query: 235 DMFKMNKLLAKHI 247
DMFKM LL+ H+
Sbjct: 853 DMFKMATLLSAHL 865
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 294 EMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLG 333
E+ + + TK+VW+YIK + L+D N +I+ DAKL ++ G
Sbjct: 808 EITRGDMTKKVWDYIKTHQLQDTNNKRLIIPDAKLSQVFG 847
>gi|89897832|ref|YP_514942.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydophila felis
Fe/C-56]
gi|89331204|dbj|BAE80797.1| DNA topoisomerase I-fused to SWI domain [Chlamydophila felis
Fe/C-56]
Length = 862
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 43/69 (62%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
SP+L ++G + R E K++W YI+ +NLQ P NK+ +I DD R V + DMF++
Sbjct: 791 SPQLAQMIGNEPVARGEATKKIWKYIKDHNLQSPENKKMLIPDDKFRGVIGPEPVDMFQL 850
Query: 240 NKLLAKHII 248
KLL +H+
Sbjct: 851 PKLLNQHLF 859
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 38/61 (62%)
Query: 291 GGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNH 350
G + + EATK++W+YIK ++L+ P N +++ D K R ++G E + + ++L ++
Sbjct: 799 GNEPVARGEATKKIWKYIKDHNLQSPENKKMLIPDDKFRGVIGPEPVDMFQLPKLLNQHL 858
Query: 351 F 351
F
Sbjct: 859 F 859
>gi|146412011|ref|XP_001481977.1| hypothetical protein PGUG_05740 [Meyerozyma guilliermondii ATCC
6260]
Length = 185
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 42/68 (61%)
Query: 163 GAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICD 222
GA + G N+ +S +LQ V+G+ R +VK LWAYI+ +LQ+P +KR+I CD
Sbjct: 113 GATKPPSKTGFNREMALSSQLQEVIGEEKCSRPRVVKLLWAYIKDRDLQNPQDKRQINCD 172
Query: 223 DALRVVFE 230
+ L +F+
Sbjct: 173 EKLTALFK 180
>gi|226287699|gb|EEH43212.1| SWIB/MDM2 domain-containing protein [Paracoccidioides brasiliensis
Pb18]
Length = 275
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 40/56 (71%)
Query: 192 MPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHI 247
+ R + VK++W YIR+ +LQDP+++R+I CD +R VF+ D MF M K+L +++
Sbjct: 215 LSRPQTVKKVWQYIREKDLQDPADRRQIRCDGLMRAVFKQDRIHMFTMTKILNQNL 270
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 282 EALAKFLGTGG--REMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISA 339
E+ + TGG ++ + + K+VW+YI+ L+DP + I CD +R + + I
Sbjct: 200 ESKKEVTRTGGFHTKLSRPQTVKKVWQYIREKDLQDPADRRQIRCDGLMRAVFKQDRIHM 259
Query: 340 LGIQEMLARNHF 351
+ ++L +N +
Sbjct: 260 FTMTKILNQNLY 271
>gi|162289250|ref|YP_525185.2| DNA topoisomerase III [Rhodoferax ferrireducens T118]
Length = 1002
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 40/68 (58%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
S L AV+G + R +++K+LW YI+ NNLQD NKR I D L VF MF++
Sbjct: 934 SAALAAVIGAEPVARPQVIKKLWDYIKANNLQDAVNKRNINADAKLLAVFGKPQVTMFEL 993
Query: 240 NKLLAKHI 247
++ KH+
Sbjct: 994 AGIVGKHL 1001
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 281 SEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLG 333
S ALA +G + + + K++W+YIK N+L+D +N I DAKL + G
Sbjct: 934 SAALAAVIG--AEPVARPQVIKKLWDYIKANNLQDAVNKRNINADAKLLAVFG 984
>gi|85709228|ref|ZP_01040293.1| hypothetical protein NAP1_10123 [Erythrobacter sp. NAP1]
gi|85687938|gb|EAQ27942.1| hypothetical protein NAP1_10123 [Erythrobacter sp. NAP1]
Length = 83
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/80 (38%), Positives = 45/80 (56%)
Query: 168 GGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRV 227
G L K +S EL+ VVG+ M R ++ ++W YI+ N+LQD +KR+I D L
Sbjct: 3 GKTNALQKPVNLSGELENVVGKGPMTRAQVTSKVWEYIKANDLQDSKDKRQINPDAKLGA 62
Query: 228 VFETDCTDMFKMNKLLAKHI 247
V D MFKM ++KH+
Sbjct: 63 VIGNDQISMFKMTAAVSKHL 82
Score = 41.2 bits (95), Expect = 0.84, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 278 VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESI 337
V +S L +G G M +A+ T +VWEYIK N L+D + I DAKL ++G + I
Sbjct: 12 VNLSGELENVVGKG--PMTRAQVTSKVWEYIKANDLQDSKDKRQINPDAKLGAVIGNDQI 69
Query: 338 SALGIQEMLARN 349
S + ++++
Sbjct: 70 SMFKMTAAVSKH 81
>gi|89347451|gb|ABD71654.1| DNA topoisomerase III [Rhodoferax ferrireducens T118]
Length = 1017
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 40/68 (58%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
S L AV+G + R +++K+LW YI+ NNLQD NKR I D L VF MF++
Sbjct: 949 SAALAAVIGAEPVARPQVIKKLWDYIKANNLQDAVNKRNINADAKLLAVFGKPQVTMFEL 1008
Query: 240 NKLLAKHI 247
++ KH+
Sbjct: 1009 AGIVGKHL 1016
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 281 SEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLG 333
S ALA +G + + + K++W+YIK N+L+D +N I DAKL + G
Sbjct: 949 SAALAAVIG--AEPVARPQVIKKLWDYIKANNLQDAVNKRNINADAKLLAVFG 999
>gi|196234314|ref|ZP_03133144.1| SWIB/MDM2 domain protein [Chthoniobacter flavus Ellin428]
gi|196221668|gb|EDY16208.1| SWIB/MDM2 domain protein [Chthoniobacter flavus Ellin428]
Length = 97
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/66 (46%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 183 LQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFE-TDCTDMFKMNK 241
L VVG +PRT++ K+LW YI+KN LQD K +I DDAL+ VF MF+M K
Sbjct: 30 LAKVVGSKPLPRTDLTKKLWDYIKKNKLQDAKKKTQINADDALKAVFNGKKSVSMFEMTK 89
Query: 242 LLAKHI 247
L++ H+
Sbjct: 90 LVSGHL 95
>gi|121606850|ref|YP_984179.1| DNA topoisomerase III [Polaromonas naphthalenivorans CJ2]
gi|120595819|gb|ABM39258.1| DNA topoisomerase III [Polaromonas naphthalenivorans CJ2]
Length = 990
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 7/91 (7%)
Query: 159 NPPVGAKRRGGPGGLNKVCGVSPE--LQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
+ P ++ PG G+ P L A++G + R +++K+LW YI+ NLQDP+NK
Sbjct: 904 DKPKAVRKAAAPG-----AGLKPSDALAAIIGSEQVARPQVIKKLWDYIKDQNLQDPANK 958
Query: 217 RKIICDDALRVVFETDCTDMFKMNKLLAKHI 247
R I D L VF MF++ ++ KH+
Sbjct: 959 RAINADAKLLPVFGKPQVTMFELAGIVGKHL 989
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 281 SEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLG 333
S+ALA +G+ ++ + + K++W+YIK +L+DP N I DAKL + G
Sbjct: 922 SDALAAIIGS--EQVARPQVIKKLWDYIKDQNLQDPANKRAINADAKLLPVFG 972
>gi|260219612|emb|CBA26457.1| hypothetical protein Csp_E35450 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 80
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%)
Query: 193 PRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHI 247
PRTE+V +LWAYI+KN LQD NKR I D L+ +F MF++ L+ KH+
Sbjct: 25 PRTEVVSKLWAYIKKNGLQDAVNKRNINADAKLKEIFGKAQVTMFELAGLIGKHL 79
Score = 38.5 bits (88), Expect = 5.6, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 30/53 (56%)
Query: 297 QAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARN 349
+ E ++W YIK N L+D +N I DAKL+E+ G ++ + ++ ++
Sbjct: 26 RTEVVSKLWAYIKKNGLQDAVNKRNINADAKLKEIFGKAQVTMFELAGLIGKH 78
>gi|71017749|ref|XP_759105.1| hypothetical protein UM02958.1 [Ustilago maydis 521]
gi|46098897|gb|EAK84130.1| hypothetical protein UM02958.1 [Ustilago maydis 521]
Length = 846
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 52/96 (54%)
Query: 157 KENPPVGAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
K N P K P + +SPEL +++ R ++ LW+Y+++ L D +++
Sbjct: 584 KGNVPTKVKIVLYPAYTPERYSLSPELGSLLDIREESRAGVISALWSYVKEKKLLDETDR 643
Query: 217 RKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEP 252
+K+ CD ALR +F TD + M +++ +H+ P +P
Sbjct: 644 KKVKCDSALRSLFNTDTINFHHMPEVVNRHLHPAQP 679
>gi|68473744|ref|XP_718975.1| hypothetical protein CaO19.6013 [Candida albicans SC5314]
gi|68473953|ref|XP_718873.1| hypothetical protein CaO19.13434 [Candida albicans SC5314]
gi|46440666|gb|EAK99969.1| hypothetical protein CaO19.13434 [Candida albicans SC5314]
gi|46440772|gb|EAL00074.1| hypothetical protein CaO19.6013 [Candida albicans SC5314]
Length = 136
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 40/60 (66%)
Query: 171 GGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFE 230
N+ +SPEL V+G R ++VK LWAYI+ +NLQ+P +KR+I CD+ L+ +F+
Sbjct: 51 NAFNREMALSPELTNVIGVDKCSRPQVVKLLWAYIKDHNLQNPQDKRQIECDEKLQKLFK 110
>gi|167521577|ref|XP_001745127.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776741|gb|EDQ90360.1| predicted protein [Monosiga brevicollis MX1]
Length = 434
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Query: 171 GGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFE 230
G L ++ V L VVG R ++V +LW YIR +NLQ+P KR+I+CD+ALR VF+
Sbjct: 347 GRLKQLSSV---LAVVVGCAEETRPQVVSKLWTYIRGHNLQNPDKKREILCDEALRAVFK 403
>gi|418528270|ref|ZP_13094220.1| DNA topoisomerase III [Comamonas testosteroni ATCC 11996]
gi|371454646|gb|EHN67648.1| DNA topoisomerase III [Comamonas testosteroni ATCC 11996]
Length = 978
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 41/68 (60%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
S +L AV+G R +++K+LW YI+ N LQD +KR I D L+ VF + MF++
Sbjct: 910 SADLAAVIGSEPTSRPDVIKKLWDYIKANGLQDAKDKRAINADAKLKPVFGKEQISMFEL 969
Query: 240 NKLLAKHI 247
++ KH+
Sbjct: 970 AGIVGKHV 977
Score = 40.8 bits (94), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 30/51 (58%)
Query: 299 EATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARN 349
+ K++W+YIK N L+D + I DAKL+ + G E IS + ++ ++
Sbjct: 926 DVIKKLWDYIKANGLQDAKDKRAINADAKLKPVFGKEQISMFELAGIVGKH 976
>gi|299530913|ref|ZP_07044327.1| DNA topoisomerase III [Comamonas testosteroni S44]
gi|298721134|gb|EFI62077.1| DNA topoisomerase III [Comamonas testosteroni S44]
Length = 978
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 41/68 (60%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
S +L AV+G R +++K+LW YI+ N LQD +KR I D L+ VF + MF++
Sbjct: 910 SADLAAVIGSEPTSRPDVIKKLWDYIKANGLQDAKDKRAINADAKLKPVFGKEQISMFEL 969
Query: 240 NKLLAKHI 247
++ KH+
Sbjct: 970 AGIVGKHV 977
Score = 40.8 bits (94), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 30/51 (58%)
Query: 299 EATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARN 349
+ K++W+YIK N L+D + I DAKL+ + G E IS + ++ ++
Sbjct: 926 DVIKKLWDYIKANGLQDAKDKRAINADAKLKPVFGKEQISMFELAGIVGKH 976
>gi|264680921|ref|YP_003280831.1| DNA topoisomerase III [Comamonas testosteroni CNB-2]
gi|262211437|gb|ACY35535.1| DNA topoisomerase III [Comamonas testosteroni CNB-2]
Length = 974
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 41/68 (60%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
S +L AV+G R +++K+LW YI+ N LQD +KR I D L+ VF + MF++
Sbjct: 906 SADLAAVIGSEPTSRPDVIKKLWDYIKANGLQDAKDKRAINADAKLKPVFGKEQISMFEL 965
Query: 240 NKLLAKHI 247
++ KH+
Sbjct: 966 AGIVGKHV 973
Score = 40.8 bits (94), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 30/51 (58%)
Query: 299 EATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARN 349
+ K++W+YIK N L+D + I DAKL+ + G E IS + ++ ++
Sbjct: 922 DVIKKLWDYIKANGLQDAKDKRAINADAKLKPVFGKEQISMFELAGIVGKH 972
>gi|297851606|ref|XP_002893684.1| SWIB complex BAF60b domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339526|gb|EFH69943.1| SWIB complex BAF60b domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 112
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 172 GLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFE- 230
G+ K VS +L + G+ + R +K++W Y++ +NLQ+P+NK++I CDD L+ +F+
Sbjct: 32 GIFKTLPVSQQLASFAGESELTRGSALKKVWEYVKLHNLQNPANKKEIHCDDKLKTIFDG 91
Query: 231 TDCTDMFKMNKLLAKHI 247
D + ++ KLL+ H
Sbjct: 92 KDKVGITEIMKLLSPHF 108
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISA 339
+S+ LA F G E+ + A K+VWEY+K+++L++P N I CD KL+ + +
Sbjct: 39 VSQQLASFAGE--SELTRGSALKKVWEYVKLHNLQNPANKKEIHCDDKLKTIF--DGKDK 94
Query: 340 LGIQEML 346
+GI E++
Sbjct: 95 VGITEIM 101
>gi|221069760|ref|ZP_03545865.1| DNA topoisomerase III [Comamonas testosteroni KF-1]
gi|220714783|gb|EED70151.1| DNA topoisomerase III [Comamonas testosteroni KF-1]
Length = 978
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 41/68 (60%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
S +L AV+G R +++K+LW YI+ N LQD +KR I D L+ VF + MF++
Sbjct: 910 SADLAAVIGSEPTSRPDVIKKLWDYIKANGLQDAKDKRAINADAKLKPVFGKEQISMFEL 969
Query: 240 NKLLAKHI 247
++ KH+
Sbjct: 970 AGIVGKHV 977
Score = 40.8 bits (94), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 30/51 (58%)
Query: 299 EATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARN 349
+ K++W+YIK N L+D + I DAKL+ + G E IS + ++ ++
Sbjct: 926 DVIKKLWDYIKANGLQDAKDKRAINADAKLKPVFGKEQISMFELAGIVGKH 976
>gi|168052120|ref|XP_001778499.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670097|gb|EDQ56672.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 396
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Query: 192 MPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLE 251
+ R I K LW YI++N LQ+P +IICD LR++FE D F+M KLL KH
Sbjct: 154 LSRFAIHKLLWIYIKQNKLQNPKKMNEIICDQQLRLIFEKDSVGQFEMFKLLNKHF---- 209
Query: 252 PTK 254
PTK
Sbjct: 210 PTK 212
>gi|296414408|ref|XP_002836893.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295632735|emb|CAZ81084.1| unnamed protein product [Tuber melanosporum]
Length = 235
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 36/47 (76%)
Query: 183 LQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF 229
L ++G+ + R E VK++WAY+++ NLQDP +KR I+CDD+++ +F
Sbjct: 182 LSGLLGETMLSRPETVKRIWAYVKERNLQDPEDKRYILCDDSMKPIF 228
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Query: 278 VIISEALAKFLGTGGREMLQA-EATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLG 333
+I+SE L+ LG ML E KR+W Y+K +L+DP + ILCD ++ + G
Sbjct: 176 LILSEPLSGLLG---ETMLSRPETVKRIWAYVKERNLQDPEDKRYILCDDSMKPIFG 229
>gi|29840743|ref|NP_829849.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydophila caviae
GPIC]
gi|29835093|gb|AAP05727.1| DNA topoisomerase I [Chlamydophila caviae GPIC]
Length = 861
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 43/69 (62%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
SPEL ++G + R E K++W YI+ +NLQ P NK+ ++ DD + + + DMF++
Sbjct: 790 SPELALMIGDEPVARGEATKKVWKYIKDHNLQSPENKKMLVPDDKFQAIIGPEPVDMFQL 849
Query: 240 NKLLAKHII 248
KLL +H+
Sbjct: 850 PKLLNQHLF 858
Score = 41.2 bits (95), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 39/64 (60%)
Query: 288 LGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLA 347
L G + + EATK+VW+YIK ++L+ P N +++ D K + ++G E + + ++L
Sbjct: 795 LMIGDEPVARGEATKKVWKYIKDHNLQSPENKKMLVPDDKFQAIIGPEPVDMFQLPKLLN 854
Query: 348 RNHF 351
++ F
Sbjct: 855 QHLF 858
>gi|115444003|ref|NP_001045781.1| Os02g0130000 [Oryza sativa Japonica Group]
gi|41052552|dbj|BAD07734.1| putative SWIb domain-containing protein [Oryza sativa Japonica
Group]
gi|41053059|dbj|BAD07989.1| putative SWIb domain-containing protein [Oryza sativa Japonica
Group]
gi|113535312|dbj|BAF07695.1| Os02g0130000 [Oryza sativa Japonica Group]
gi|125580680|gb|EAZ21611.1| hypothetical protein OsJ_05241 [Oryza sativa Japonica Group]
gi|215741232|dbj|BAG97727.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 131
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 188 GQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFE-TDCTDMFKMNKLLAKH 246
G P M R VK +W +I+ N LQ+P+NKR+I CDD L+ +F D M ++ KLL+ H
Sbjct: 67 GAPEMSRAGAVKLIWNHIKANGLQNPANKREINCDDKLKSLFAGKDKVGMMEIAKLLSPH 126
Query: 247 II 248
I
Sbjct: 127 FI 128
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELL-GCESIS 338
+S+AL++F G G EM +A A K +W +IK N L++P N I CD KL+ L G + +
Sbjct: 57 VSDALSRFAG-GAPEMSRAGAVKLIWNHIKANGLQNPANKREINCDDKLKSLFAGKDKVG 115
Query: 339 ALGIQEMLARNHFLR 353
+ I ++L+ HF++
Sbjct: 116 MMEIAKLLS-PHFIK 129
>gi|255311467|ref|ZP_05354037.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis 6276]
gi|255317768|ref|ZP_05359014.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis 6276s]
Length = 857
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 42/72 (58%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
S L AV+G + R E K+LW YI++ LQ P NK+ II D L+ V D DMF +
Sbjct: 786 SAALAAVIGTDPVGRPEATKKLWEYIKEKGLQSPQNKKIIIPDSKLQGVIGADPIDMFAL 845
Query: 240 NKLLAKHIIPLE 251
+K L+ H+I E
Sbjct: 846 SKKLSAHLIKEE 857
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 7/76 (9%)
Query: 281 SEALAKFLGTG--GREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESIS 338
S ALA +GT GR EATK++WEYIK L+ P N +I+ D+KL+ ++G + I
Sbjct: 786 SAALAAVIGTDPVGR----PEATKKLWEYIKEKGLQSPQNKKIIIPDSKLQGVIGADPID 841
Query: 339 ALGIQEMLARNHFLRQ 354
+ + L+ H +++
Sbjct: 842 MFALSKKLS-AHLIKE 856
>gi|255349029|ref|ZP_05381036.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis 70]
gi|255503567|ref|ZP_05381957.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis 70s]
gi|255507247|ref|ZP_05382886.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis D(s)2923]
gi|385242030|ref|YP_005809870.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis E/11023]
gi|385245638|ref|YP_005814461.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis E/150]
gi|386262998|ref|YP_005816277.1| DNA topoisomerase I [Chlamydia trachomatis Sweden2]
gi|389858337|ref|YP_006360579.1| DNA topoisomerase I [Chlamydia trachomatis F/SW4]
gi|389859213|ref|YP_006361454.1| DNA topoisomerase I [Chlamydia trachomatis E/SW3]
gi|389860089|ref|YP_006362329.1| DNA topoisomerase I [Chlamydia trachomatis F/SW5]
gi|289525686|emb|CBJ15167.1| DNA topoisomerase I [Chlamydia trachomatis Sweden2]
gi|296435254|gb|ADH17432.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis E/150]
gi|296438973|gb|ADH21126.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis E/11023]
gi|380249409|emb|CCE14705.1| DNA topoisomerase I [Chlamydia trachomatis F/SW5]
gi|380250284|emb|CCE13816.1| DNA topoisomerase I [Chlamydia trachomatis F/SW4]
gi|380251162|emb|CCE12927.1| DNA topoisomerase I [Chlamydia trachomatis E/SW3]
gi|440527354|emb|CCP52838.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis D/SotonD1]
gi|440530027|emb|CCP55511.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis E/SotonE4]
gi|440530926|emb|CCP56410.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis E/SotonE8]
gi|440531817|emb|CCP57327.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis F/SotonF3]
gi|440535394|emb|CCP60904.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis E/Bour]
Length = 857
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 42/72 (58%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
S L AV+G + R E K+LW YI++ LQ P NK+ II D L+ V D DMF +
Sbjct: 786 SAALAAVIGADPVGRPEATKKLWEYIKEKGLQSPQNKKIIIPDSKLQGVIGADPIDMFAL 845
Query: 240 NKLLAKHIIPLE 251
+K L+ H+I E
Sbjct: 846 SKKLSAHLIKEE 857
Score = 45.1 bits (105), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 7/76 (9%)
Query: 281 SEALAKFLGTG--GREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESIS 338
S ALA +G GR EATK++WEYIK L+ P N +I+ D+KL+ ++G + I
Sbjct: 786 SAALAAVIGADPVGR----PEATKKLWEYIKEKGLQSPQNKKIIIPDSKLQGVIGADPID 841
Query: 339 ALGIQEMLARNHFLRQ 354
+ + L+ H +++
Sbjct: 842 MFALSKKLS-AHLIKE 856
>gi|440529137|emb|CCP54621.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis D/SotonD6]
Length = 857
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 42/72 (58%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
S L AV+G + R E K+LW YI++ LQ P NK+ II D L+ V D DMF +
Sbjct: 786 SAALAAVIGADPVGRPEATKKLWEYIKEKGLQSPQNKKIIIPDSKLQGVIGADPIDMFAL 845
Query: 240 NKLLAKHIIPLE 251
+K L+ H+I E
Sbjct: 846 SKKLSAHLIKEE 857
Score = 45.1 bits (105), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 7/76 (9%)
Query: 281 SEALAKFLGTG--GREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESIS 338
S ALA +G GR EATK++WEYIK L+ P N +I+ D+KL+ ++G + I
Sbjct: 786 SAALAAVIGADPVGR----PEATKKLWEYIKEKGLQSPQNKKIIIPDSKLQGVIGADPID 841
Query: 339 ALGIQEMLARNHFLRQ 354
+ + L+ H +++
Sbjct: 842 MFALSKKLS-AHLIKE 856
>gi|15605375|ref|NP_220161.1| DNA topoisomerase I/SWI [Chlamydia trachomatis D/UW-3/CX]
gi|76789382|ref|YP_328468.1| fused DNA topoisomerase I/SWI domain-containing protein [Chlamydia
trachomatis A/HAR-13]
gi|237803072|ref|YP_002888266.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis B/Jali20/OT]
gi|237804993|ref|YP_002889147.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis B/TZ1A828/OT]
gi|376282652|ref|YP_005156478.1| DNA topoisomerase I [Chlamydia trachomatis A2497]
gi|385240176|ref|YP_005808018.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis G/9768]
gi|385241102|ref|YP_005808943.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis G/11222]
gi|385242955|ref|YP_005810794.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis G/9301]
gi|385246562|ref|YP_005815384.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis G/11074]
gi|3329092|gb|AAC68820.1| DNA Topoisomerase I-Fused to SWI Domain [Chlamydia trachomatis
D/UW-3/CX]
gi|76167912|gb|AAX50920.1| DNA topoisomerase I [Chlamydia trachomatis A/HAR-13]
gi|231273293|emb|CAX10208.1| DNA topoisomerase I [Chlamydia trachomatis B/TZ1A828/OT]
gi|231274306|emb|CAX11101.1| DNA topoisomerase I [Chlamydia trachomatis B/Jali20/OT]
gi|296436181|gb|ADH18355.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis G/9768]
gi|296437110|gb|ADH19280.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis G/11222]
gi|296438041|gb|ADH20202.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis G/11074]
gi|297140543|gb|ADH97301.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis G/9301]
gi|371908682|emb|CAX09314.1| DNA topoisomerase I [Chlamydia trachomatis A2497]
gi|438690580|emb|CCP49837.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis A/7249]
gi|438691665|emb|CCP48939.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis A/5291]
gi|438693038|emb|CCP48040.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis A/363]
gi|440525570|emb|CCP50821.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis K/SotonK1]
gi|440528246|emb|CCP53730.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis D/SotonD5]
gi|440532710|emb|CCP58220.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis G/SotonG1]
Length = 857
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 42/72 (58%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
S L AV+G + R E K+LW YI++ LQ P NK+ II D L+ V D DMF +
Sbjct: 786 SAALAAVIGADPVGRPEATKKLWEYIKEKGLQSPQNKKIIIPDSKLQGVIGADPIDMFAL 845
Query: 240 NKLLAKHIIPLE 251
+K L+ H+I E
Sbjct: 846 SKKLSAHLIKEE 857
Score = 45.1 bits (105), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 7/76 (9%)
Query: 281 SEALAKFLGTG--GREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESIS 338
S ALA +G GR EATK++WEYIK L+ P N +I+ D+KL+ ++G + I
Sbjct: 786 SAALAAVIGADPVGR----PEATKKLWEYIKEKGLQSPQNKKIIIPDSKLQGVIGADPID 841
Query: 339 ALGIQEMLARNHFLRQ 354
+ + L+ H +++
Sbjct: 842 MFALSKKLS-AHLIKE 856
>gi|166153984|ref|YP_001654102.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis 434/Bu]
gi|301335181|ref|ZP_07223425.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L2tet1]
gi|339625384|ref|YP_004716863.1| DNA topoisomerase I [Chlamydia trachomatis L2c]
gi|165929972|emb|CAP03455.1| DNA topoisomerase I [Chlamydia trachomatis 434/Bu]
gi|339460716|gb|AEJ77219.1| DNA topoisomerase I [Chlamydia trachomatis L2c]
gi|440537174|emb|CCP62688.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L1/440/LN]
gi|440538063|emb|CCP63577.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L1/1322/p2]
gi|440538953|emb|CCP64467.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L1/115]
gi|440539842|emb|CCP65356.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L1/224]
gi|440540734|emb|CCP66248.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L2/25667R]
gi|440541622|emb|CCP67136.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L3/404/LN]
Length = 857
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 42/72 (58%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
S L AV+G + R E K+LW YI++ LQ P NK+ II D L+ V D DMF +
Sbjct: 786 SAALAAVIGADPVGRPEATKKLWEYIKEKGLQSPQNKKIIIPDSKLQGVIGADPIDMFAL 845
Query: 240 NKLLAKHIIPLE 251
+K L+ H+I E
Sbjct: 846 SKKLSAHLIKEE 857
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 7/76 (9%)
Query: 281 SEALAKFLGTG--GREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESIS 338
S ALA +G GR EATK++WEYIK L+ P N +I+ D+KL+ ++G + I
Sbjct: 786 SAALAAVIGADPVGR----PEATKKLWEYIKEKGLQSPQNKKIIIPDSKLQGVIGADPID 841
Query: 339 ALGIQEMLARNHFLRQ 354
+ + L+ H +++
Sbjct: 842 MFALSKKLS-AHLIKE 856
>gi|440533605|emb|CCP59115.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis Ia/SotonIa1]
gi|440534499|emb|CCP60009.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis Ia/SotonIa3]
Length = 857
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 42/72 (58%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
S L AV+G + R E K+LW YI++ LQ P NK+ II D L+ V D DMF +
Sbjct: 786 SAALAAVIGADPVGRPEATKKLWEYIKEKGLQSPQNKKIIIPDSKLQGVIGADPIDMFAL 845
Query: 240 NKLLAKHIIPLE 251
+K L+ H+I E
Sbjct: 846 SKKLSAHLIKEE 857
Score = 45.1 bits (105), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 7/76 (9%)
Query: 281 SEALAKFLGTG--GREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESIS 338
S ALA +G GR EATK++WEYIK L+ P N +I+ D+KL+ ++G + I
Sbjct: 786 SAALAAVIGADPVGR----PEATKKLWEYIKEKGLQSPQNKKIIIPDSKLQGVIGADPID 841
Query: 339 ALGIQEMLARNHFLRQ 354
+ + L+ H +++
Sbjct: 842 MFALSKKLS-AHLIKE 856
>gi|166154859|ref|YP_001653114.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L2b/UCH-1/proctitis]
gi|165930847|emb|CAP06409.1| DNA topoisomerase I [Chlamydia trachomatis L2b/UCH-1/proctitis]
gi|440526456|emb|CCP51940.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L2b/8200/07]
gi|440536281|emb|CCP61794.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L2b/795]
gi|440542509|emb|CCP68023.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L2b/UCH-2]
gi|440543400|emb|CCP68914.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L2b/Canada2]
gi|440544291|emb|CCP69805.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L2b/LST]
gi|440545181|emb|CCP70695.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L2b/Ams1]
gi|440546071|emb|CCP71585.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L2b/CV204]
gi|440914333|emb|CCP90750.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L2b/Ams2]
gi|440915223|emb|CCP91640.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L2b/Ams3]
gi|440916115|emb|CCP92532.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L2b/Canada1]
gi|440917009|emb|CCP93426.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L2b/Ams4]
gi|440917899|emb|CCP94316.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L2b/Ams5]
Length = 857
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 42/72 (58%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
S L AV+G + R E K+LW YI++ LQ P NK+ II D L+ V D DMF +
Sbjct: 786 SAALAAVIGADPVGRPEATKKLWEYIKEKGLQSPQNKKIIIPDSKLQGVIGADPIDMFAL 845
Query: 240 NKLLAKHIIPLE 251
+K L+ H+I E
Sbjct: 846 SKKLSAHLIKEE 857
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 7/76 (9%)
Query: 281 SEALAKFLGTG--GREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESIS 338
S ALA +G GR EATK++WEYIK L+ P N +I+ D+KL+ ++G + I
Sbjct: 786 SAALAAVIGADPVGR----PEATKKLWEYIKEKGLQSPQNKKIIIPDSKLQGVIGADPID 841
Query: 339 ALGIQEMLARNHFLRQ 354
+ + L+ H +++
Sbjct: 842 MFALSKKLS-AHLIKE 856
>gi|225427597|ref|XP_002270707.1| PREDICTED: upstream activation factor subunit spp27 [Vitis
vinifera]
gi|296085458|emb|CBI29190.3| unnamed protein product [Vitis vinifera]
Length = 115
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 171 GGLNKVCGVSPELQAVVGQ-PAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF 229
GG+ K VSP+L +G P R+ +K++W +I+ +NLQ+P+NK++I CD+ L+ +F
Sbjct: 33 GGITKPVPVSPQLGKFLGGVPQASRSLAIKKVWEHIKLHNLQNPTNKKEICCDEKLKTIF 92
Query: 230 E-TDCTDMFKMNKLLAKHIIPL 250
+ D ++ KLL+ H + +
Sbjct: 93 DGKDKVGFLEIAKLLSPHFVKI 114
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELL-GCESIS 338
+S L KFLG G + ++ A K+VWE+IK+++L++P N I CD KL+ + G + +
Sbjct: 41 VSPQLGKFLG-GVPQASRSLAIKKVWEHIKLHNLQNPTNKKEICCDEKLKTIFDGKDKVG 99
Query: 339 ALGIQEMLARNHFLR 353
L I ++L+ HF++
Sbjct: 100 FLEIAKLLS-PHFVK 113
>gi|125537942|gb|EAY84337.1| hypothetical protein OsI_05714 [Oryza sativa Indica Group]
Length = 131
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 188 GQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFE-TDCTDMFKMNKLLAKH 246
G P M R VK +W +I+ N LQ+P+NKR+I CDD L+ +F D M ++ KLL+ H
Sbjct: 67 GAPEMSRAGAVKLIWNHIKANGLQNPANKREINCDDKLKSLFAGKDKVGMMEIAKLLSPH 126
Query: 247 II 248
I
Sbjct: 127 FI 128
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELL-GCESIS 338
+S+AL++F G EM +A A K +W +IK N L++P N I CD KL+ L G + +
Sbjct: 57 VSDALSRF-ADGAPEMSRAGAVKLIWNHIKANGLQNPANKREINCDDKLKSLFAGKDKVG 115
Query: 339 ALGIQEMLARNHFLRQS 355
+ I ++L+ HF++ +
Sbjct: 116 MMEIAKLLS-PHFIKAN 131
>gi|385243850|ref|YP_005811696.1| DNA topoisomerase I [Chlamydia trachomatis D-EC]
gi|385244730|ref|YP_005812574.1| DNA topoisomerase I [Chlamydia trachomatis D-LC]
gi|385270359|ref|YP_005813519.1| DNA topoisomerase I [Chlamydia trachomatis A2497]
gi|297748773|gb|ADI51319.1| DNA topoisomerase I [Chlamydia trachomatis D-EC]
gi|297749653|gb|ADI52331.1| DNA topoisomerase I [Chlamydia trachomatis D-LC]
gi|347975499|gb|AEP35520.1| DNA topoisomerase I [Chlamydia trachomatis A2497]
Length = 870
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 42/72 (58%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
S L AV+G + R E K+LW YI++ LQ P NK+ II D L+ V D DMF +
Sbjct: 799 SAALAAVIGADPVGRPEATKKLWEYIKEKGLQSPQNKKIIIPDSKLQGVIGADPIDMFAL 858
Query: 240 NKLLAKHIIPLE 251
+K L+ H+I E
Sbjct: 859 SKKLSAHLIKEE 870
Score = 44.7 bits (104), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 7/76 (9%)
Query: 281 SEALAKFLGTG--GREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESIS 338
S ALA +G GR EATK++WEYIK L+ P N +I+ D+KL+ ++G + I
Sbjct: 799 SAALAAVIGADPVGR----PEATKKLWEYIKEKGLQSPQNKKIIIPDSKLQGVIGADPID 854
Query: 339 ALGIQEMLARNHFLRQ 354
+ + L+ H +++
Sbjct: 855 MFALSKKLS-AHLIKE 869
>gi|430813358|emb|CCJ29281.1| unnamed protein product [Pneumocystis jirovecii]
Length = 296
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+SP L ++ + RTEI+ LW YI+ + LQD KR I CD+ L+ +F D K
Sbjct: 217 LSPRLSQILDIKSETRTEIIMGLWEYIKFHKLQDEEEKRIINCDNNLKEIFAMDRIFFPK 276
Query: 239 MNKLLAKHIIPLEP 252
+ +++ KH++PL+P
Sbjct: 277 IPEIINKHLLPLDP 290
>gi|118397681|ref|XP_001031172.1| SWIB/MDM2 domain containing protein [Tetrahymena thermophila]
gi|89285496|gb|EAR83509.1| SWIB/MDM2 domain containing protein [Tetrahymena thermophila SB210]
Length = 551
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 56/111 (50%), Gaps = 15/111 (13%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
V P+L +++G R+ + +W YI+ NLQD NK +I CDDA+R VF D ++ +
Sbjct: 296 VDPKLASIIGFEICTRSTALAAIWEYIKLKNLQDSENKSEINCDDAMRSVFLQDKINIGQ 355
Query: 239 M-----------NKLLAKHIIPLEPTKESSKR---FKPDAESTTEGMESGP 275
+ N+ +H I L T E ++R F D +S GME P
Sbjct: 356 ITAKLRQLLTIPNQTTIRHQIKLSGTPEENERVYDFVVDVDSQL-GMEIMP 405
>gi|168027533|ref|XP_001766284.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682498|gb|EDQ68916.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 107
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 171 GGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALR-VVF 229
G L + VSP L+ +G R E +K++W YI+ LQ+P NKR+I+CD+ L+ V+
Sbjct: 15 GALTRAIQVSPTLKKFLGVGECSRPESMKRIWDYIKDQKLQNPQNKREILCDEKLKPVLG 74
Query: 230 ETDCTDMFKMNKLLAKHI 247
D ++ KLL++H
Sbjct: 75 GKDKVGFTEIAKLLSEHF 92
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 277 SVIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCES 336
++ +S L KFLG G E + E+ KR+W+YIK L++P N ILCD KL+ +LG +
Sbjct: 20 AIQVSPTLKKFLGVG--ECSRPESMKRIWDYIKDQKLQNPQNKREILCDEKLKPVLGGK- 76
Query: 337 ISALGIQEM--LARNHF 351
+G E+ L HF
Sbjct: 77 -DKVGFTEIAKLLSEHF 92
>gi|91790539|ref|YP_551491.1| DNA topoisomerase III [Polaromonas sp. JS666]
gi|91699764|gb|ABE46593.1| DNA topoisomerase III [Polaromonas sp. JS666]
Length = 992
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
S L AV+G + RT+++K+LW YI+ LQD +NKR I D L VF MF++
Sbjct: 924 SDSLAAVIGAEPVARTQVIKKLWDYIKAEGLQDAANKRAINADAKLLPVFGKPQVTMFEL 983
Query: 240 NKLLAKHI 247
++ KH+
Sbjct: 984 AGIVGKHL 991
>gi|402084129|gb|EJT79147.1| hypothetical protein GGTG_04235 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 538
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 39/76 (51%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+SP L +V RTEI +LW YIR N LQ+ KR+ CD LR + D +
Sbjct: 302 ISPALADIVDMSEGSRTEITTRLWDYIRLNGLQEEEEKRQFRCDHLLRKILGRDVGAIPL 361
Query: 239 MNKLLAKHIIPLEPTK 254
+ + H++PL P +
Sbjct: 362 LQDYITAHLMPLPPVR 377
>gi|328849291|gb|EGF98474.1| hypothetical protein MELLADRAFT_95643 [Melampsora larici-populina
98AG31]
Length = 168
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 172 GLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFET 231
G+++ S L V+G ++V+++WAYI+ NNLQDP +K K+ CD L+ F
Sbjct: 90 GIHEYLDCSTALGDVIGVSTCLCPQVVEKIWAYIKANNLQDPKDKEKVSCDGKLKTSFNN 149
Query: 232 DCTDMFKMN 240
T MF MN
Sbjct: 150 Q-THMFTMN 157
>gi|256071676|ref|XP_002572165.1| hypothetical protein [Schistosoma mansoni]
gi|353229931|emb|CCD76102.1| hypothetical protein Smp_006830.1 [Schistosoma mansoni]
Length = 220
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 46/81 (56%)
Query: 168 GGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRV 227
G G + +S E+ +G+ + R+++VK+ W R+ +L DP+NK+ ++C++ +
Sbjct: 139 SGKTGFTRPLTLSDEMAEYIGEKELSRSDLVKKFWEIAREQDLFDPNNKQFVVCNEDWQR 198
Query: 228 VFETDCTDMFKMNKLLAKHII 248
+F MF + K L +HII
Sbjct: 199 LFNLKRFRMFGVAKHLKRHII 219
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/71 (22%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 278 VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESI 337
+ +S+ +A+++G +E+ +++ K+ WE + L DP N ++C+ + L +
Sbjct: 148 LTLSDEMAEYIGE--KELSRSDLVKKFWEIAREQDLFDPNNKQFVVCNEDWQRLFNLKRF 205
Query: 338 SALGIQEMLAR 348
G+ + L R
Sbjct: 206 RMFGVAKHLKR 216
>gi|398805193|ref|ZP_10564174.1| DNA topoisomerase III [Polaromonas sp. CF318]
gi|398092355|gb|EJL82770.1| DNA topoisomerase III [Polaromonas sp. CF318]
Length = 984
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
S L AV+G + RT+++K+LW YI+ LQD +NKR I D L VF MF++
Sbjct: 914 SDALAAVIGAEPVARTQVIKKLWDYIKAEGLQDAANKRAINADAKLLPVFGKPQVTMFEL 973
Query: 240 NKLLAKHI 247
++ KH+
Sbjct: 974 AGIVGKHL 981
>gi|402084128|gb|EJT79146.1| hypothetical protein, variant [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 512
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 39/76 (51%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+SP L +V RTEI +LW YIR N LQ+ KR+ CD LR + D +
Sbjct: 276 ISPALADIVDMSEGSRTEITTRLWDYIRLNGLQEEEEKRQFRCDHLLRKILGRDVGAIPL 335
Query: 239 MNKLLAKHIIPLEPTK 254
+ + H++PL P +
Sbjct: 336 LQDYITAHLMPLPPVR 351
>gi|195587282|ref|XP_002083394.1| GD13706 [Drosophila simulans]
gi|194195403|gb|EDX08979.1| GD13706 [Drosophila simulans]
Length = 229
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 43/69 (62%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
S +L A++G+ ++PR E+VK++WA I++ +L DP NK+ ICDD L V + F M
Sbjct: 160 SGQLSALMGESSLPRHEVVKKVWAIIKERDLYDPKNKQFAICDDELMKVMKIRRFRTFGM 219
Query: 240 NKLLAKHII 248
K L H +
Sbjct: 220 LKHLKPHFL 228
>gi|430811160|emb|CCJ31335.1| unnamed protein product [Pneumocystis jirovecii]
Length = 291
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 45/75 (60%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+SP L ++ + RTEI+ LW YI+ + LQD KR I CD+ L+ +F D K
Sbjct: 72 LSPRLSQILDIKSETRTEIIMGLWEYIKFHKLQDEEEKRIINCDNNLKEIFAMDRIFFPK 131
Query: 239 MNKLLAKHIIPLEPT 253
+ +++ KH++PL+P
Sbjct: 132 IPEIINKHLLPLDPI 146
>gi|256071678|ref|XP_002572166.1| hypothetical protein [Schistosoma mansoni]
gi|353229930|emb|CCD76101.1| hypothetical protein Smp_006830.3 [Schistosoma mansoni]
Length = 169
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 46/80 (57%)
Query: 169 GPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVV 228
G G + +S E+ +G+ + R+++VK+ W R+ +L DP+NK+ ++C++ + +
Sbjct: 89 GKTGFTRPLTLSDEMAEYIGEKELSRSDLVKKFWEIAREQDLFDPNNKQFVVCNEDWQRL 148
Query: 229 FETDCTDMFKMNKLLAKHII 248
F MF + K L +HII
Sbjct: 149 FNLKRFRMFGVAKHLKRHII 168
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/71 (22%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 278 VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESI 337
+ +S+ +A+++G +E+ +++ K+ WE + L DP N ++C+ + L +
Sbjct: 97 LTLSDEMAEYIGE--KELSRSDLVKKFWEIAREQDLFDPNNKQFVVCNEDWQRLFNLKRF 154
Query: 338 SALGIQEMLAR 348
G+ + L R
Sbjct: 155 RMFGVAKHLKR 165
>gi|18398106|ref|NP_564382.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]
gi|12321306|gb|AAG50727.1|AC079041_20 hypothetical protein [Arabidopsis thaliana]
gi|12597845|gb|AAG60155.1|AC074360_20 hypothetical protein [Arabidopsis thaliana]
gi|21537302|gb|AAM61643.1| unknown [Arabidopsis thaliana]
gi|89001005|gb|ABD59092.1| At1g31760 [Arabidopsis thaliana]
gi|332193268|gb|AEE31389.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]
Length = 112
Score = 57.8 bits (138), Expect = 9e-06, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 172 GLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFE- 230
G+ K VS +L + G+ + R +K++W Y++ +NLQ+P+NK++I CDD L+ +F+
Sbjct: 32 GIFKTRPVSQQLASFAGERELTRGSALKKVWEYVKLHNLQNPANKKEIHCDDKLKTIFDG 91
Query: 231 TDCTDMFKMNKLLAKH 246
D + ++ KLL+ H
Sbjct: 92 KDKVGITEIMKLLSPH 107
Score = 50.1 bits (118), Expect = 0.002, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISA 339
+S+ LA F G RE+ + A K+VWEY+K+++L++P N I CD KL+ + +
Sbjct: 39 VSQQLASF--AGERELTRGSALKKVWEYVKLHNLQNPANKKEIHCDDKLKTIF--DGKDK 94
Query: 340 LGIQEML 346
+GI E++
Sbjct: 95 VGITEIM 101
>gi|323336060|gb|EGA77334.1| Tri1p [Saccharomyces cerevisiae Vin13]
Length = 186
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 172 GLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFET 231
+ KV +P LQ +G +PRT++VK +W YI++++LQ+P ++R+I+CD+ + +F
Sbjct: 120 SVRKVLLSAP-LQKFLGSEELPRTQVVKMIWQYIKEHDLQNPKDRREILCDEKMEPIFWQ 178
Query: 232 DCTDMF 237
D+F
Sbjct: 179 KNDDVF 184
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Query: 278 VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKL 328
V++S L KFLG+ E+ + + K +W+YIK + L++P + ILCD K+
Sbjct: 124 VLLSAPLQKFLGSE--ELPRTQVVKMIWQYIKEHDLQNPKDRREILCDEKM 172
>gi|452985259|gb|EME85016.1| hypothetical protein MYCFIDRAFT_195906 [Pseudocercospora fijiensis
CIRAD86]
Length = 400
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 42/63 (66%)
Query: 171 GGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFE 230
GG +K +S L A++G+ + R + VK++W Y+++ +LQ+P +KR+I+CD+ + + +
Sbjct: 337 GGFHKPMNLSEPLSALLGETQLSRPQTVKKIWGYVKERDLQNPKDKRQIMCDNDIAIQYA 396
Query: 231 TDC 233
C
Sbjct: 397 ILC 399
>gi|294936387|ref|XP_002781747.1| Upstream activation factor subunit UAF30, putative [Perkinsus
marinus ATCC 50983]
gi|239892669|gb|EER13542.1| Upstream activation factor subunit UAF30, putative [Perkinsus
marinus ATCC 50983]
Length = 128
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 10/105 (9%)
Query: 121 LNFSQPQPSQAAAPPPQPHSNVSKAEAFPQISAEVAKENPPVGAKRRGGPGGLNKVCGVS 180
LN Q + + PP K Q V KE P G++++C +S
Sbjct: 20 LNLVQARFNAVVGSPPGGQEKGKKTRRKKQ--HRVMKEGPH--------NTGIHQLCALS 69
Query: 181 PELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDAL 225
PEL +VG P R ++ K+LW YI+ +NLQ+ ++KR I D L
Sbjct: 70 PELTTIVGVPKASRVDVNKKLWVYIKSHNLQETTDKRNIKPDAVL 114
>gi|260221882|emb|CBA30889.1| hypothetical protein Csp_C25810 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 650
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
S EL AV+G + R +++K+LW YI+ N LQD +KR I D L VF MF++
Sbjct: 582 SAELAAVIGAEPIARPQVMKKLWDYIKANGLQDAKDKRSINADAKLLAVFGKPQVTMFEL 641
Query: 240 NKLLAKHI 247
+ KH+
Sbjct: 642 AGIAGKHL 649
>gi|357146513|ref|XP_003574019.1| PREDICTED: protein TRI1-like [Brachypodium distachyon]
Length = 135
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 188 GQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFE-TDCTDMFKMNKLLAKH 246
G P + R +K +WA+I+ NNLQ+P+N+++I CD+ L+ +F D M ++++LL+ H
Sbjct: 71 GAPEISRANAIKIVWAHIKANNLQNPANRKEINCDEKLKSIFSGRDKVGMMEISRLLSPH 130
Query: 247 II 248
+
Sbjct: 131 FM 132
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELL-GCESIS 338
+S+AL +F G G E+ +A A K VW +IK N+L++P N I CD KL+ + G + +
Sbjct: 61 VSDALRRFPG-GAPEISRANAIKIVWAHIKANNLQNPANRKEINCDEKLKSIFSGRDKVG 119
Query: 339 ALGIQEMLARNHFLR 353
+ I +L+ HF++
Sbjct: 120 MMEISRLLS-PHFMK 133
>gi|341039027|gb|EGS24019.1| hypothetical protein CTHT_0007300 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 539
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 39/76 (51%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+SPEL +V R E V +W YI+ N LQ+ KR CDD L+ + D +
Sbjct: 299 LSPELAEIVDMKEATRQEAVMAVWEYIKLNKLQEDEEKRNFRCDDMLKKIIPRDSGFIPH 358
Query: 239 MNKLLAKHIIPLEPTK 254
+N+ L H+ PL P K
Sbjct: 359 LNEYLTPHLRPLSPIK 374
>gi|410074841|ref|XP_003955003.1| hypothetical protein KAFR_0A04330 [Kazachstania africana CBS 2517]
gi|372461585|emb|CCF55868.1| hypothetical protein KAFR_0A04330 [Kazachstania africana CBS 2517]
Length = 330
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+S +L+ ++G R E+V+ LW YI KN LQ+ +++++ D+ +R VF + D F
Sbjct: 121 LSKDLEELLGLRQSTRAELVRLLWKYIEKNGLQNSDDEQEVFSDEKMRKVF-GEKIDEFS 179
Query: 239 MNKLLAKHIIPL 250
+N +L +H I L
Sbjct: 180 INTILQRHTIDL 191
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 278 VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESI 337
V +S+ L + LG R+ +AE + +W+YI+ N L++ + + D K+R++ G E I
Sbjct: 119 VQLSKDLEELLGL--RQSTRAELVRLLWKYIEKNGLQNSDDEQEVFSDEKMRKVFG-EKI 175
Query: 338 SALGIQEMLAR 348
I +L R
Sbjct: 176 DEFSINTILQR 186
>gi|303289769|ref|XP_003064172.1| high mobility group family B protein [Micromonas pusilla CCMP1545]
gi|226454488|gb|EEH51794.1| high mobility group family B protein [Micromonas pusilla CCMP1545]
Length = 258
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 171 GGLNKVCGVSPELQAVVG-QPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF 229
GGL K +P L +G + R + +LW+Y + L DP+NKR ++ D L+ +
Sbjct: 176 GGLQKPYKCTPALTKFLGGDKTISRANLTSRLWSYFKSKELMDPANKRWVVADKQLKDLL 235
Query: 230 ETDCTDMFKMNKLLAKHIIPLE 251
D F ++K L++H++P++
Sbjct: 236 GVDRFQGFTVSKYLSQHLLPMD 257
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 81/187 (43%), Gaps = 24/187 (12%)
Query: 169 GPGGLNKVCGV---SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDAL 225
GP G +C V P++ A QP + EI KQL + + + K+ DD L
Sbjct: 89 GPKGAY-MCFVQIARPKINA--SQPGLKFAEIAKQLGEQWKSMDAPTRAKYDKLAEDDKL 145
Query: 226 RVVFETDCTDMFKMNKLLAKHIIPLEPTKESSKRFKPDAESTTEGMESGPSSVIISEALA 285
R + +P++ R + A+ + G++ P + AL
Sbjct: 146 RYARDIAA-------------YVPMDAAGLDQLRKEKQAKKSAGGLQK-PYKC--TPALT 189
Query: 286 KFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEM 345
KFLG G + + +A T R+W Y K L DP N ++ D +L++LLG + + +
Sbjct: 190 KFLG-GDKTISRANLTSRLWSYFKSKELMDPANKRWVVADKQLKDLLGVDRFQGFTVSKY 248
Query: 346 LARNHFL 352
L++ H L
Sbjct: 249 LSQ-HLL 254
>gi|145355189|ref|XP_001421849.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582088|gb|ABP00143.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 273
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 97/239 (40%), Gaps = 17/239 (7%)
Query: 3 SDQEIAKGVETLLRQSDRNASTSLNGVVKQLEAKLGLDLSHKAGFIRDQISLLLRSHPTP 62
+ ++IA+ + ++R +D +T + + K LE LG DL FIR ++ L+ T
Sbjct: 4 TQRQIARLLPDIIRGADLEKAT-VRTLQKSLEDSLGRDLGEHKNFIRAEVEHFLKGAVTK 62
Query: 63 QQVATNTQPQPQPQPQQLPPKDHFTLQHHPQFSLPPQQFPPHFAL----------HHPHP 112
++ A + + + + + + P + +P
Sbjct: 63 KRAALDEEGSKGKKAKAQKKTGRGKTKELVDPTRPKGPKGAYMCFVSARRSQIKDANPDM 122
Query: 113 HLPQFPQELNFSQPQPSQAAAPPPQPHSNVSKAEAFPQISAEVAKENPPVGA-----KRR 167
P +EL S+A+ + + + K ++ + V + + RR
Sbjct: 123 TFPDIARELGVEWKTMSEASRHRYEQMAELDKDRYTREMLSYVPLSDEKMQELREQQSRR 182
Query: 168 GGPGGLNKVCGVSPELQAVVG-QPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDAL 225
GGL + SPEL A +G + R E+ ++W Y R++NL DP NKR I+ D L
Sbjct: 183 KAAGGLQVMYHCSPELTAFLGGAKTINRKELTTRIWKYFREHNLMDPINKRFIVPDTKL 241
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 284 LAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELL 332
L FLG G + + + E T R+W+Y + ++L DP+N I+ D KL +LL
Sbjct: 198 LTAFLG-GAKTINRKELTTRIWKYFREHNLMDPINKRFIVPDTKLSKLL 245
>gi|291235390|ref|XP_002737629.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 317
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 38/64 (59%)
Query: 167 RGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALR 226
R G G + +S EL +VG M R ++VK++W IR+ L DP NK+ ++CD+ L
Sbjct: 168 RKGKSGYSAEMVLSHELAEIVGTNRMARHDVVKRMWEIIRERKLMDPKNKQFMLCDEQLL 227
Query: 227 VVFE 230
VFE
Sbjct: 228 KVFE 231
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 14/73 (19%)
Query: 273 SGPSS-VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDA----- 326
SG S+ +++S LA+ +GT M + + KR+WE I+ L DP N +LCD
Sbjct: 172 SGYSAEMVLSHELAEIVGTN--RMARHDVVKRMWEIIRERKLMDPKNKQFMLCDEQLLKV 229
Query: 327 ------KLRELLG 333
KLRELL
Sbjct: 230 FEHGDQKLRELLS 242
>gi|443898720|dbj|GAC76054.1| SWI/SNF transcription activation complex subunit [Pseudozyma
antarctica T-34]
Length = 896
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 51/96 (53%)
Query: 157 KENPPVGAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
K N P K P + ++PEL ++ R ++ LW+Y+++ L D +++
Sbjct: 636 KGNVPTKVKIVLYPAYTPERYSLAPELATLLDIKEESRAGVISALWSYVKEKKLLDETDR 695
Query: 217 RKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEP 252
+K+ CD ALR +F TD + + +++ +++ P +P
Sbjct: 696 KKVKCDAALRSLFNTDTINFHHIPEVINRYLHPAQP 731
>gi|424825601|ref|ZP_18250588.1| fused DNA topoisomerase I/SWI domain protein [Chlamydophila abortus
LLG]
gi|333410700|gb|EGK69687.1| fused DNA topoisomerase I/SWI domain protein [Chlamydophila abortus
LLG]
Length = 872
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 42/69 (60%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
SP+L ++G + R E K++W YI+ +NLQ P NK+ ++ DD + + DMF++
Sbjct: 791 SPQLALMIGPEPLGRGEATKKVWQYIKDHNLQSPENKKMLLPDDKFAAIIGPEPVDMFQL 850
Query: 240 NKLLAKHII 248
KLL +H+
Sbjct: 851 PKLLNQHLF 859
Score = 40.8 bits (94), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 35/55 (63%)
Query: 297 QAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNHF 351
+ EATK+VW+YIK ++L+ P N ++L D K ++G E + + ++L ++ F
Sbjct: 805 RGEATKKVWQYIKDHNLQSPENKKMLLPDDKFAAIIGPEPVDMFQLPKLLNQHLF 859
>gi|62185557|ref|YP_220342.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydophila
abortus S26/3]
gi|62148624|emb|CAH64396.1| DNA topoisomerase I-fused to SWI domain [Chlamydophila abortus
S26/3]
Length = 872
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 42/69 (60%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
SP+L ++G + R E K++W YI+ +NLQ P NK+ ++ DD + + DMF++
Sbjct: 791 SPQLALMIGPEPLGRGEATKKVWQYIKDHNLQSPENKKMLLPDDKFAAIIGPEPVDMFQL 850
Query: 240 NKLLAKHII 248
KLL +H+
Sbjct: 851 PKLLNQHLF 859
Score = 40.8 bits (94), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 35/55 (63%)
Query: 297 QAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNHF 351
+ EATK+VW+YIK ++L+ P N ++L D K ++G E + + ++L ++ F
Sbjct: 805 RGEATKKVWQYIKDHNLQSPENKKMLLPDDKFAAIIGPEPVDMFQLPKLLNQHLF 859
>gi|226489212|emb|CAX75750.1| Upstream activation factor subunit UAF30 [Schistosoma japonicum]
Length = 220
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 45/81 (55%)
Query: 168 GGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRV 227
G G + +S EL VG + R+++VK+ W ++ +L DP+NK+ ++C++ +
Sbjct: 139 SGKTGFTRPLLLSDELAEYVGAKELSRSDLVKKFWKIAKEQDLFDPNNKQFVVCNEDWQR 198
Query: 228 VFETDCTDMFKMNKLLAKHII 248
+F MF + K L +HII
Sbjct: 199 LFNLKRFRMFGVAKHLKRHII 219
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 278 VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESI 337
+++S+ LA+++G +E+ +++ K+ W+ K L DP N ++C+ + L +
Sbjct: 148 LLLSDELAEYVG--AKELSRSDLVKKFWKIAKEQDLFDPNNKQFVVCNEDWQRLFNLKRF 205
Query: 338 SALGIQEMLAR 348
G+ + L R
Sbjct: 206 RMFGVAKHLKR 216
>gi|392585449|gb|EIW74788.1| SWI/SNF complex 60 kDa subunit [Coniophora puteana RWD-64-598 SS2]
Length = 416
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 48/75 (64%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
++PEL ++G R +++ LW YI+ + LQD +++R+I D+AL+ +F + T +
Sbjct: 201 IAPELGNILGITEESRLGVIQTLWNYIKIHGLQDKTDRRRIRADEALKPIFGGEGTTFYH 260
Query: 239 MNKLLAKHIIPLEPT 253
+ +L+ ++++P +P
Sbjct: 261 LPELVNRYLMPPDPV 275
>gi|226471292|emb|CAX70727.1| Upstream activation factor subunit UAF30 [Schistosoma japonicum]
Length = 220
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 45/81 (55%)
Query: 168 GGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRV 227
G G + +S EL VG + R+++VK+ W ++ +L DP+NK+ ++C++ +
Sbjct: 139 SGKTGFTRPLLLSDELAEYVGAKELSRSDLVKKFWKIAKEQDLFDPNNKQFVVCNEDWQR 198
Query: 228 VFETDCTDMFKMNKLLAKHII 248
+F MF + K L +HII
Sbjct: 199 LFNLKRFRMFGVAKHLKRHII 219
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 278 VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESI 337
+++S+ LA+++G +E+ +++ K+ W+ K L DP N ++C+ + L +
Sbjct: 148 LLLSDELAEYVG--AKELSRSDLVKKFWKIAKEQDLFDPNNKQFVVCNEDWQRLFNLKRF 205
Query: 338 SALGIQEMLAR 348
G+ + L R
Sbjct: 206 RMFGVAKHLKR 216
>gi|330444002|ref|YP_004376988.1| DNA topoisomerase [Chlamydophila pecorum E58]
gi|328807112|gb|AEB41285.1| DNA topoisomerase [Chlamydophila pecorum E58]
Length = 862
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 40/68 (58%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
SP L +++G + R E K++W YI+ +NLQ P NK+ ++ D+ + DMF +
Sbjct: 790 SPALASMIGDAPLSRGEATKKVWEYIKAHNLQSPENKKLLLPDEKFSAIIGNAPIDMFAL 849
Query: 240 NKLLAKHI 247
KLL+ H+
Sbjct: 850 PKLLSAHL 857
Score = 45.1 bits (105), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 281 SEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISAL 340
S ALA +G + + EATK+VWEYIK ++L+ P N ++L D K ++G I
Sbjct: 790 SPALASMIGDA--PLSRGEATKKVWEYIKAHNLQSPENKKLLLPDEKFSAIIGNAPIDMF 847
Query: 341 GIQEMLA 347
+ ++L+
Sbjct: 848 ALPKLLS 854
>gi|242063920|ref|XP_002453249.1| hypothetical protein SORBIDRAFT_04g002500 [Sorghum bicolor]
gi|241933080|gb|EES06225.1| hypothetical protein SORBIDRAFT_04g002500 [Sorghum bicolor]
Length = 131
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 170 PGGLNKVCGVSPELQAVVG-QPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVV 228
P G++K VS EL G P + R++ VK +WA+I+ + LQDP+ K +I CD L+ +
Sbjct: 49 PTGISKPIPVSAELSRFAGGAPEVARSQAVKLIWAHIKAHGLQDPAKKTEINCDATLKSL 108
Query: 229 FET-DCTDMFKMNKLLAKHII 248
F D M ++ KLL H +
Sbjct: 109 FGGRDRIGMLEIMKLLRPHFL 129
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 3/76 (3%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGC-ESIS 338
+S L++F G G E+ +++A K +W +IK + L+DP I CDA L+ L G + I
Sbjct: 58 VSAELSRFAG-GAPEVARSQAVKLIWAHIKAHGLQDPAKKTEINCDATLKSLFGGRDRIG 116
Query: 339 ALGIQEMLARNHFLRQ 354
L I ++L R HFL+
Sbjct: 117 MLEIMKLL-RPHFLKN 131
>gi|336374576|gb|EGO02913.1| hypothetical protein SERLA73DRAFT_176377 [Serpula lacrymans var.
lacrymans S7.3]
gi|336387457|gb|EGO28602.1| hypothetical protein SERLADRAFT_459225 [Serpula lacrymans var.
lacrymans S7.9]
Length = 365
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 45/75 (60%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
VSPEL V+G R +++ LW YI+ N LQD ++R+I DD LR +F + +
Sbjct: 149 VSPELGNVLGIKEESRLGVIQTLWNYIKINGLQDKVDRRRIRADDHLRPIFGGESVVFQQ 208
Query: 239 MNKLLAKHIIPLEPT 253
+ +L+ ++++P +P
Sbjct: 209 LPELVNRYLMPPDPV 223
Score = 38.5 bits (88), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 271 MESGPSSVIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRE 330
+E P +S L LG +E + + +W YIK+N L+D ++ I D LR
Sbjct: 140 LEHFPEQYKVSPELGNVLGI--KEESRLGVIQTLWNYIKINGLQDKVDRRRIRADDHLRP 197
Query: 331 LLGCESISALGIQEMLAR 348
+ G ES+ + E++ R
Sbjct: 198 IFGGESVVFQQLPELVNR 215
>gi|255083979|ref|XP_002508564.1| animal specific-mbd4, 5 and 6 [Micromonas sp. RCC299]
gi|226523841|gb|ACO69822.1| animal specific-mbd4, 5 and 6 [Micromonas sp. RCC299]
Length = 288
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 171 GGLNKVCGVSPELQAVVG-QPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF 229
GGL K S L +G + R + ++W+Y ++ NL DP NKR II D L +
Sbjct: 207 GGLQKPYKCSAALTKFLGGDKTISRATLTSKMWSYFKEKNLMDPENKRWIIADKPLSDLL 266
Query: 230 ETDCTDMFKMNKLLAKHIIPLE 251
D F ++K L+ H++P+E
Sbjct: 267 GIDRFQGFTVSKYLSPHLLPME 288
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 281 SEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISAL 340
S AL KFLG G + + +A T ++W Y K +L DP N I+ D L +LLG +
Sbjct: 216 SAALTKFLG-GDKTISRATLTSKMWSYFKEKNLMDPENKRWIIADKPLSDLLGIDRFQGF 274
Query: 341 GIQEMLA 347
+ + L+
Sbjct: 275 TVSKYLS 281
Score = 37.7 bits (86), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 2 VSDQEIAKGVETLLRQSDRNASTSLNGVVKQLEAKLGLDLSHKAGFIRDQISLLLRSH 59
D ++ K + +L+ +D +T N + KQLEA LG+ +S + FIR+++ L+S+
Sbjct: 14 TKDSQVIKRLHQILKTADLEKTTVKN-IQKQLEADLGVPMSDRKQFIREEVEKFLKSN 70
>gi|212722732|ref|NP_001132227.1| uncharacterized protein LOC100193662 [Zea mays]
gi|195621502|gb|ACG32581.1| SWIb domain-containing protein [Zea mays]
Length = 134
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Query: 170 PGGLNKVCGVSPELQAVVG-QPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVV 228
P G+ K VS E + G P + R+E +K +WA+I+ + LQ+P+ K +I CD L+ +
Sbjct: 52 PTGITKPMPVSDEFRRFAGGAPEVARSEAIKLIWAHIKAHGLQNPAKKTEINCDATLKSL 111
Query: 229 FET-DCTDMFKMNKLLAKHI 247
F D M ++N+LL H
Sbjct: 112 FGGRDKVGMLEINRLLNTHF 131
Score = 44.3 bits (103), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGC-ESIS 338
+S+ +F G G E+ ++EA K +W +IK + L++P I CDA L+ L G + +
Sbjct: 61 VSDEFRRFAG-GAPEVARSEAIKLIWAHIKAHGLQNPAKKTEINCDATLKSLFGGRDKVG 119
Query: 339 ALGIQEMLARNHF 351
L I +L HF
Sbjct: 120 MLEINRLL-NTHF 131
>gi|194693822|gb|ACF80995.1| unknown [Zea mays]
Length = 134
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Query: 170 PGGLNKVCGVSPELQAVVG-QPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVV 228
P G+ K VS E + G P + R+E +K +WA+I+ + LQ+P+ K +I CD L+ +
Sbjct: 52 PTGITKPMPVSDEFRRFAGGAPEVARSEAIKLIWAHIKAHGLQNPAKKTEINCDATLKSL 111
Query: 229 FET-DCTDMFKMNKLLAKHI 247
F D M ++N+LL H
Sbjct: 112 FGGRDKVGMLEINRLLNAHF 131
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGC-ESIS 338
+S+ +F G G E+ ++EA K +W +IK + L++P I CDA L+ L G + +
Sbjct: 61 VSDEFRRFAG-GAPEVARSEAIKLIWAHIKAHGLQNPAKKTEINCDATLKSLFGGRDKVG 119
Query: 339 ALGIQEMLARNHF 351
L I +L HF
Sbjct: 120 MLEINRLL-NAHF 131
>gi|226489210|emb|CAX75749.1| Upstream activation factor subunit UAF30 [Schistosoma japonicum]
Length = 162
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 45/80 (56%)
Query: 169 GPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVV 228
G G + +S EL VG + R+++VK+ W ++ +L DP+NK+ ++C++ + +
Sbjct: 82 GKTGFTRPLLLSDELAEYVGAKELSRSDLVKKFWKIAKEQDLFDPNNKQFVVCNEDWQRL 141
Query: 229 FETDCTDMFKMNKLLAKHII 248
F MF + K L +HII
Sbjct: 142 FNLKRFRMFGVAKHLKRHII 161
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/72 (23%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 278 VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESI 337
+++S+ LA+++G +E+ +++ K+ W+ K L DP N ++C+ + L +
Sbjct: 90 LLLSDELAEYVG--AKELSRSDLVKKFWKIAKEQDLFDPNNKQFVVCNEDWQRLFNLKRF 147
Query: 338 SALGIQEMLARN 349
G+ + L R+
Sbjct: 148 RMFGVAKHLKRH 159
>gi|388853824|emb|CCF52545.1| related to SWI/SNF related, matrix associated, actin dependent
regulator of chromatin subfamily D member 1 [Ustilago
hordei]
Length = 900
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 50/96 (52%)
Query: 157 KENPPVGAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
K N P K P ++PEL ++ R ++ LW+Y+++ L D +++
Sbjct: 638 KGNVPTKVKIVLYPAYTPDRYSLAPELATLLDIREESRAGVISALWSYVKEKKLLDETDR 697
Query: 217 RKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEP 252
+K+ CD ALR +F TD + + +++ +++ P +P
Sbjct: 698 KKVKCDAALRSLFNTDTINFHHIPEVINRYLHPAQP 733
>gi|195629858|gb|ACG36570.1| SWIb domain-containing protein [Zea mays]
Length = 119
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGC-ESIS 338
+SEA +F G G RE+ ++EA K VW +IK + L++P N I CDA L+ L G + I
Sbjct: 46 VSEAFRRFAG-GAREVARSEAIKLVWTHIKAHGLQNPSNKTEINCDATLKSLFGGRDKIG 104
Query: 339 ALGIQEMLARNHFLRQ 354
+ + ++L+ HFL+
Sbjct: 105 MMEVSKLLS-PHFLKN 119
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 170 PGGLNKVCGVSPELQAVVGQP-AMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVV 228
P G+ K VS + G + R+E +K +W +I+ + LQ+PSNK +I CD L+ +
Sbjct: 37 PAGITKPMPVSEAFRRFAGGAREVARSEAIKLVWTHIKAHGLQNPSNKTEINCDATLKSL 96
Query: 229 FET-DCTDMFKMNKLLAKHII 248
F D M +++KLL+ H +
Sbjct: 97 FGGRDKIGMMEVSKLLSPHFL 117
>gi|226510371|ref|NP_001150291.1| LOC100283921 precursor [Zea mays]
gi|195605564|gb|ACG24612.1| SWIb domain-containing protein [Zea mays]
gi|195638128|gb|ACG38532.1| SWIb domain-containing protein [Zea mays]
gi|195653081|gb|ACG46008.1| SWIb domain-containing protein [Zea mays]
gi|223947003|gb|ACN27585.1| unknown [Zea mays]
gi|413935440|gb|AFW69991.1| SWIb domain-containing protein [Zea mays]
Length = 119
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGC-ESIS 338
+SEA +F G G RE+ ++EA K VW +IK + L++P N I CDA L+ L G + I
Sbjct: 46 VSEAFRRFAG-GAREVARSEAIKLVWTHIKAHGLQNPSNKTEINCDATLKSLFGGRDKIG 104
Query: 339 ALGIQEMLARNHFLRQ 354
+ + ++L+ HFL+
Sbjct: 105 MMEVSKLLS-PHFLKN 119
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 170 PGGLNKVCGVSPELQAVVGQP-AMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVV 228
P G+ K VS + G + R+E +K +W +I+ + LQ+PSNK +I CD L+ +
Sbjct: 37 PAGITKPMPVSEAFRRFAGGAREVARSEAIKLVWTHIKAHGLQNPSNKTEINCDATLKSL 96
Query: 229 FET-DCTDMFKMNKLLAKHII 248
F D M +++KLL+ H +
Sbjct: 97 FGGRDKIGMMEVSKLLSPHFL 117
>gi|195605408|gb|ACG24534.1| SWIb domain-containing protein [Zea mays]
Length = 116
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGC-ESIS 338
+SEA +F G G RE+ ++EA K VW +IK + L++P N I CDA L+ L G + I
Sbjct: 43 VSEAFRRFAG-GAREVARSEAIKLVWAHIKAHGLQNPSNKTEINCDATLKSLFGGRDKIG 101
Query: 339 ALGIQEMLARNHFLRQ 354
+ + ++L+ HFL+
Sbjct: 102 MMEVSKLLS-PHFLKN 116
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 170 PGGLNKVCGVSPELQAVVGQP-AMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVV 228
P G+ K VS + G + R+E +K +WA+I+ + LQ+PSNK +I CD L+ +
Sbjct: 34 PAGITKPMPVSEAFRRFAGGAREVARSEAIKLVWAHIKAHGLQNPSNKTEINCDATLKSL 93
Query: 229 FET-DCTDMFKMNKLLAKHII 248
F D M +++KLL+ H +
Sbjct: 94 FGGRDKIGMMEVSKLLSPHFL 114
>gi|345563399|gb|EGX46400.1| hypothetical protein AOL_s00109g158 [Arthrobotrys oligospora ATCC
24927]
Length = 511
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 43/74 (58%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+SPELQ+++ R I+ +W Y N LQD +R I CD+ L+ F+ D + +
Sbjct: 301 LSPELQSILDTTEDSRAGIMLGIWEYAYLNGLQDRDERRNITCDEKLKKAFKMDRIQVPQ 360
Query: 239 MNKLLAKHIIPLEP 252
+ +L++ H+ P+EP
Sbjct: 361 IPELISPHLKPIEP 374
>gi|343429786|emb|CBQ73358.1| related to SWI/SNF related, matrix associated, actin dependent
regulator of chromatin subfamily D member 1 [Sporisorium
reilianum SRZ2]
Length = 916
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 45/75 (60%)
Query: 178 GVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMF 237
+S EL +++ R ++ LW+Y+++ L D ++++K+ CD ALR +F T+ +
Sbjct: 675 SLSTELASLLDIREESRAGVISALWSYVKEKKLLDETDRKKVKCDAALRSLFNTETINFH 734
Query: 238 KMNKLLAKHIIPLEP 252
M +++ +H+ P +P
Sbjct: 735 HMPEVVNRHLHPAQP 749
>gi|312378188|gb|EFR24830.1| hypothetical protein AND_10347 [Anopheles darlingi]
Length = 297
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 39/69 (56%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+S +L A+ G ++PR E+VK++W I++ NL DP NK+ ICD L+ V F
Sbjct: 227 LSADLAALCGAESLPRHEVVKKIWTIIKERNLYDPKNKQFAICDAELQKVIGVKRFRTFG 286
Query: 239 MNKLLAKHI 247
M K L H
Sbjct: 287 MLKYLKPHF 295
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 291 GGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNH 350
G + + E K++W IK +L DP N +CDA+L++++G + G+ + L + H
Sbjct: 236 GAESLPRHEVVKKIWTIIKERNLYDPKNKQFAICDAELQKVIGVKRFRTFGMLKYL-KPH 294
Query: 351 F 351
F
Sbjct: 295 F 295
>gi|296423386|ref|XP_002841235.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637471|emb|CAZ85426.1| unnamed protein product [Tuber melanosporum]
Length = 492
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 35/59 (59%)
Query: 194 RTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEP 252
R IV +W Y+R N LQDP +R I CD+ L+ +F D ++ +L HI+PLEP
Sbjct: 294 RAGIVMGIWEYVRINGLQDPDERRTINCDENLKKIFAQDRLYFPQIPELTLAHILPLEP 352
Score = 41.6 bits (96), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 275 PSSVIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGC 334
P ++ ALA L T +E +A +WEY+++N L+DP I CD L+++
Sbjct: 274 PDRFRLNSALADLLDT--KEDTRAGIVMGIWEYVRINGLQDPDERRTINCDENLKKIFAQ 331
Query: 335 ESI 337
+ +
Sbjct: 332 DRL 334
>gi|395327855|gb|EJF60251.1| SWI/SNF complex 60 kDa subunit [Dichomitus squalens LYAD-421 SS1]
Length = 434
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 4/78 (5%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
V PEL ++G R +V+ LW YI++NNLQD ++RKI D LR +F T ++
Sbjct: 219 VQPELANIIGVKEESRIGVVQALWNYIKQNNLQDKQDRRKIHADARLRPIFNTHNNQEYE 278
Query: 239 ----MNKLLAKHIIPLEP 252
+ +++ +++ P EP
Sbjct: 279 YFSALPEIVNRYLAPPEP 296
>gi|407461185|ref|YP_006738960.1| DNA topoisomerase I [Chlamydia psittaci WC]
gi|405787519|gb|AFS26263.1| DNA topoisomerase I [Chlamydia psittaci WC]
Length = 862
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 42/69 (60%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
SP+L ++G + R E K++W YI+ +NLQ P NK+ ++ D+ + + DMF++
Sbjct: 791 SPQLALMIGPEPVGRGEATKKVWQYIKDHNLQSPENKKMLLPDEKFEAIIGPEPVDMFQL 850
Query: 240 NKLLAKHII 248
KLL +H+
Sbjct: 851 PKLLNRHLF 859
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 35/55 (63%)
Query: 297 QAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNHF 351
+ EATK+VW+YIK ++L+ P N ++L D K ++G E + + ++L R+ F
Sbjct: 805 RGEATKKVWQYIKDHNLQSPENKKMLLPDEKFEAIIGPEPVDMFQLPKLLNRHLF 859
>gi|388579586|gb|EIM19908.1| hypothetical protein WALSEDRAFT_61248 [Wallemia sebi CBS 633.66]
Length = 468
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 44/77 (57%)
Query: 177 CGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDM 236
G+S L ++G R I+ +WAY+++NNL D ++R I DD L+ +F D
Sbjct: 243 YGISEPLSQLLGIKEDSRAGIITHMWAYVKQNNLLDKEDRRIIKADDNLKSIFGCDSIYY 302
Query: 237 FKMNKLLAKHIIPLEPT 253
++ +++ K ++P++P
Sbjct: 303 HQLPEVVQKFLLPVDPV 319
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 59/119 (49%), Gaps = 9/119 (7%)
Query: 224 ALRVVFETDCTDMFKMNKLLAKHIIPLEPTKESSKRFKPDAESTTEG-----MESGPSSV 278
++ V F+ D + ++ + ++ H P EP K+ + K + + + ++ P
Sbjct: 186 SMIVEFDRDSS-LYPESSIVEWHRQPAEPEKDGFE-IKRRGDQSLKARIIIHLDHIPEKY 243
Query: 279 IISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESI 337
ISE L++ LG +E +A +W Y+K N+L D + +I D L+ + GC+SI
Sbjct: 244 GISEPLSQLLGI--KEDSRAGIITHMWAYVKQNNLLDKEDRRIIKADDNLKSIFGCDSI 300
>gi|225460865|ref|XP_002277738.1| PREDICTED: upstream activation factor subunit UAF30 [Vitis
vinifera]
gi|297737490|emb|CBI26691.3| unnamed protein product [Vitis vinifera]
Length = 100
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 183 LQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF 229
L+ VGQ + R ++W+YI+ NNLQDP+NK +ICDD LR +
Sbjct: 30 LREFVGQSQISRLGCFMRVWSYIKANNLQDPNNKNVVICDDKLRSIL 76
Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 23/30 (76%)
Query: 303 RVWEYIKVNHLEDPLNSMVILCDAKLRELL 332
RVW YIK N+L+DP N V++CD KLR +L
Sbjct: 47 RVWSYIKANNLQDPNNKNVVICDDKLRSIL 76
>gi|6523091|emb|CAB62349.1| putative protein [Arabidopsis thaliana]
Length = 205
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 67/130 (51%), Gaps = 11/130 (8%)
Query: 163 GAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICD 222
G RRGG ++K+ VS L VGQ + + ++++ Y +NL +P N +I+CD
Sbjct: 28 GVDRRGG---IHKIFPVSESLARFVGQSEVSFSTAMEKVEQYTDDHNLWNPENIEEILCD 84
Query: 223 DALRVVFE--TDCTDMFKMNKLLAKHIIPLEPTKESSKRFKPDAESTTEGMESGPSSVI- 279
D L+ +F+ + +M +LL +H + S + K T E + G + ++
Sbjct: 85 DNLKTIFDGQDKVVGVREMTELLLRH---FPNVRTMSAKVKATGGGTIE--KWGFNDIVK 139
Query: 280 ISEALAKFLG 289
+SE LA+F+G
Sbjct: 140 VSEPLARFVG 149
>gi|56753700|gb|AAW25047.1| unknown [Schistosoma japonicum]
gi|60687700|gb|AAX30183.1| SJCHGC01608 protein [Schistosoma japonicum]
Length = 100
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 45/80 (56%)
Query: 169 GPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVV 228
G G + +S EL VG + R+++VK+ W ++ +L DP+NK+ ++C++ + +
Sbjct: 20 GKTGFTRPLLLSDELAEYVGAKELSRSDLVKKFWKIAKEQDLFDPNNKQFVVCNEDWQRL 79
Query: 229 FETDCTDMFKMNKLLAKHII 248
F MF + K L +HII
Sbjct: 80 FNLKRFRMFGVAKHLKRHII 99
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 278 VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESI 337
+++S+ LA+++G +E+ +++ K+ W+ K L DP N ++C+ + L +
Sbjct: 28 LLLSDELAEYVGA--KELSRSDLVKKFWKIAKEQDLFDPNNKQFVVCNEDWQRLFNLKRF 85
Query: 338 SALGIQEMLAR 348
G+ + L R
Sbjct: 86 RMFGVAKHLKR 96
>gi|449533010|ref|XP_004173470.1| PREDICTED: uncharacterized protein LOC101229053, partial [Cucumis
sativus]
Length = 102
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 32/42 (76%)
Query: 170 PGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQ 211
P G+ K +SPELQA+VG P + RT+ +K +WAYI++NNLQ
Sbjct: 61 PRGITKPRKISPELQALVGAPEISRTQALKVIWAYIKENNLQ 102
>gi|384454012|ref|YP_005666608.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydophila
psittaci C19/98]
gi|334692793|gb|AEG86012.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydophila
psittaci C19/98]
Length = 855
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 42/69 (60%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
SP+L ++G + R E K++W YI+ +NLQ P NK+ ++ D+ + + DMF++
Sbjct: 784 SPQLALMIGPEPVGRGEATKKVWQYIKDHNLQSPENKKMLLPDEKFEAIIGPEPVDMFQL 843
Query: 240 NKLLAKHII 248
KLL +H+
Sbjct: 844 PKLLNQHLF 852
Score = 41.6 bits (96), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 35/55 (63%)
Query: 297 QAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNHF 351
+ EATK+VW+YIK ++L+ P N ++L D K ++G E + + ++L ++ F
Sbjct: 798 RGEATKKVWQYIKDHNLQSPENKKMLLPDEKFEAIIGPEPVDMFQLPKLLNQHLF 852
>gi|42565723|ref|NP_190429.2| SWIB complex BAF60b domain-containing protein [Arabidopsis
thaliana]
gi|332644914|gb|AEE78435.1| SWIB complex BAF60b domain-containing protein [Arabidopsis
thaliana]
Length = 183
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 67/130 (51%), Gaps = 11/130 (8%)
Query: 163 GAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICD 222
G RRGG ++K+ VS L VGQ + + ++++ Y +NL +P N +I+CD
Sbjct: 28 GVDRRGG---IHKIFPVSESLARFVGQSEVSFSTAMEKVEQYTDDHNLWNPENIEEILCD 84
Query: 223 DALRVVFE--TDCTDMFKMNKLLAKHIIPLEPTKESSKRFKPDAESTTEGMESGPSSVI- 279
D L+ +F+ + +M +LL +H + S + K T E + G + ++
Sbjct: 85 DNLKTIFDGQDKVVGVREMTELLLRH---FPNVRTMSAKVKATGGGTIE--KWGFNDIVK 139
Query: 280 ISEALAKFLG 289
+SE LA+F+G
Sbjct: 140 VSEPLARFVG 149
>gi|407459812|ref|YP_006737915.1| DNA topoisomerase I [Chlamydia psittaci M56]
gi|405786557|gb|AFS25302.1| DNA topoisomerase I [Chlamydia psittaci M56]
Length = 862
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 42/69 (60%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
SP+L ++G + R E K++W YI+ +NLQ P NK+ ++ D+ + + DMF++
Sbjct: 791 SPQLALMIGPEPVGRGEATKKVWQYIKDHNLQSPENKKMLLPDEKFEAIIGPEPVDMFQL 850
Query: 240 NKLLAKHII 248
KLL +H+
Sbjct: 851 PKLLNQHLF 859
Score = 41.6 bits (96), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 35/55 (63%)
Query: 297 QAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNHF 351
+ EATK+VW+YIK ++L+ P N ++L D K ++G E + + ++L ++ F
Sbjct: 805 RGEATKKVWQYIKDHNLQSPENKKMLLPDEKFEAIIGPEPVDMFQLPKLLNQHLF 859
>gi|407458569|ref|YP_006736874.1| DNA topoisomerase I [Chlamydia psittaci WS/RT/E30]
gi|405784806|gb|AFS23552.1| DNA topoisomerase I [Chlamydia psittaci WS/RT/E30]
Length = 862
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 42/69 (60%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
SP+L ++G + R E K++W YI+ +NLQ P NK+ ++ D+ + + DMF++
Sbjct: 791 SPQLALMIGPEPVGRGEATKKVWQYIKDHNLQSPENKKMLLPDEKFEAIIGPEPVDMFQL 850
Query: 240 NKLLAKHII 248
KLL +H+
Sbjct: 851 PKLLNQHLF 859
Score = 41.6 bits (96), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 35/55 (63%)
Query: 297 QAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNHF 351
+ EATK+VW+YIK ++L+ P N ++L D K ++G E + + ++L ++ F
Sbjct: 805 RGEATKKVWQYIKDHNLQSPENKKMLLPDEKFEAIIGPEPVDMFQLPKLLNQHLF 859
>gi|329943328|ref|ZP_08292102.1| DNA topoisomerase I [Chlamydophila psittaci Cal10]
gi|332287904|ref|YP_004422805.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydophila
psittaci 6BC]
gi|384451074|ref|YP_005663674.1| DNA topoisomerase I [Chlamydophila psittaci 6BC]
gi|384452059|ref|YP_005664657.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydophila
psittaci 01DC11]
gi|384453033|ref|YP_005665630.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydophila
psittaci 08DC60]
gi|384454991|ref|YP_005667586.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydophila
psittaci 02DC15]
gi|392377133|ref|YP_004064911.1| DNA topoisomerase I-fused to SWI domain [Chlamydophila psittaci
RD1]
gi|407454570|ref|YP_006733678.1| DNA topoisomerase I [Chlamydia psittaci 84/55]
gi|407455831|ref|YP_006734722.1| DNA topoisomerase I [Chlamydia psittaci GR9]
gi|407457257|ref|YP_006735830.1| DNA topoisomerase I [Chlamydia psittaci VS225]
gi|313848476|emb|CBY17480.1| DNA topoisomerase I-fused to SWI domain [Chlamydophila psittaci
RD1]
gi|325506763|gb|ADZ18401.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydophila
psittaci 6BC]
gi|328814875|gb|EGF84865.1| DNA topoisomerase I [Chlamydophila psittaci Cal10]
gi|328915168|gb|AEB56001.1| DNA topoisomerase I [Chlamydophila psittaci 6BC]
gi|334693769|gb|AEG86987.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydophila
psittaci 01DC11]
gi|334694748|gb|AEG87965.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydophila
psittaci 02DC15]
gi|334695722|gb|AEG88938.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydophila
psittaci 08DC60]
gi|405781329|gb|AFS20079.1| DNA topoisomerase I [Chlamydia psittaci 84/55]
gi|405782374|gb|AFS21123.1| DNA topoisomerase I [Chlamydia psittaci GR9]
gi|405784518|gb|AFS23265.1| DNA topoisomerase I [Chlamydia psittaci VS225]
Length = 862
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 42/69 (60%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
SP+L ++G + R E K++W YI+ +NLQ P NK+ ++ D+ + + DMF++
Sbjct: 791 SPQLALMIGPEPVGRGEATKKVWQYIKDHNLQSPENKKMLLPDEKFEAIIGPEPVDMFQL 850
Query: 240 NKLLAKHII 248
KLL +H+
Sbjct: 851 PKLLNQHLF 859
Score = 41.6 bits (96), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 35/55 (63%)
Query: 297 QAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNHF 351
+ EATK+VW+YIK ++L+ P N ++L D K ++G E + + ++L ++ F
Sbjct: 805 RGEATKKVWQYIKDHNLQSPENKKMLLPDEKFEAIIGPEPVDMFQLPKLLNQHLF 859
>gi|406592894|ref|YP_006740074.1| DNA topoisomerase I [Chlamydia psittaci CP3]
gi|406594463|ref|YP_006742155.1| DNA topoisomerase I [Chlamydia psittaci MN]
gi|410858916|ref|YP_006974856.1| DNA topoisomerase I-fused to SWI domain [Chlamydia psittaci 01DC12]
gi|405782895|gb|AFS21643.1| DNA topoisomerase I [Chlamydia psittaci MN]
gi|405788766|gb|AFS27509.1| DNA topoisomerase I [Chlamydia psittaci CP3]
gi|410811811|emb|CCO02466.1| DNA topoisomerase I-fused to SWI domain [Chlamydia psittaci 01DC12]
Length = 862
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 42/69 (60%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
SP+L ++G + R E K++W YI+ +NLQ P NK+ ++ D+ + + DMF++
Sbjct: 791 SPQLALMIGPEPVGRGEATKKVWQYIKDHNLQSPENKKMLLPDEKFEAIIGPEPVDMFQL 850
Query: 240 NKLLAKHII 248
KLL +H+
Sbjct: 851 PKLLNQHLF 859
Score = 41.6 bits (96), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 35/55 (63%)
Query: 297 QAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNHF 351
+ EATK+VW+YIK ++L+ P N ++L D K ++G E + + ++L ++ F
Sbjct: 805 RGEATKKVWQYIKDHNLQSPENKKMLLPDEKFEAIIGPEPVDMFQLPKLLNQHLF 859
>gi|296824178|ref|XP_002850590.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
gi|238838144|gb|EEQ27806.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
Length = 521
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMF- 237
+S EL A+V R IV ++W Y++ + LQ+ KR I CDD LR +F C M+
Sbjct: 290 LSKELAAIVDTDKDTRAGIVARIWEYVKASGLQESEEKRTIQCDDRLRAIF--GCEKMYF 347
Query: 238 -KMNKLLAKHIIPLEPTK 254
+ + A H LEP K
Sbjct: 348 PAIPESTAAHTATLEPIK 365
Score = 45.1 bits (105), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 272 ESGPSSVIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLREL 331
+ P +S+ LA + T + +A R+WEY+K + L++ I CD +LR +
Sbjct: 282 DESPERFQLSKELAAIVDTD--KDTRAGIVARIWEYVKASGLQESEEKRTIQCDDRLRAI 339
Query: 332 LGCESISALGIQEMLA 347
GCE + I E A
Sbjct: 340 FGCEKMYFPAIPESTA 355
>gi|406593941|ref|YP_006741120.1| DNA topoisomerase I [Chlamydia psittaci NJ1]
gi|405789813|gb|AFS28555.1| DNA topoisomerase I [Chlamydia psittaci NJ1]
Length = 862
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 42/69 (60%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
SP+L ++G + R E K++W YI+ +NLQ P NK+ ++ D+ + + DMF++
Sbjct: 791 SPQLALMIGPEPVGRGEATKKVWQYIKDHNLQSPENKKMLLPDEKFEAIIGPEPVDMFQL 850
Query: 240 NKLLAKHII 248
KLL +H+
Sbjct: 851 PKLLNQHLF 859
Score = 41.6 bits (96), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 35/55 (63%)
Query: 297 QAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNHF 351
+ EATK+VW+YIK ++L+ P N ++L D K ++G E + + ++L ++ F
Sbjct: 805 RGEATKKVWQYIKDHNLQSPENKKMLLPDEKFEAIIGPEPVDMFQLPKLLNQHLF 859
>gi|322709886|gb|EFZ01461.1| putative SWI/SNF complex 60 KDa subunit [Metarhizium anisopliae
ARSEF 23]
Length = 509
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALR-VVFETDCTDMF 237
+SPEL VV E V LW YIR NLQ+ KR CD+ LR VV D +
Sbjct: 291 LSPELAEVVDMSEATHQEAVAALWEYIRFWNLQEDEEKRNFRCDELLRKVVGSGDIGYIP 350
Query: 238 KMNKLLAKHIIPLEP 252
+N +A+H+ PL P
Sbjct: 351 MLNDYVARHLRPLPP 365
>gi|449071635|ref|YP_007438715.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydophila
psittaci Mat116]
gi|449040143|gb|AGE75567.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydophila
psittaci Mat116]
Length = 734
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 42/69 (60%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
SP+L ++G + R E K++W YI+ +NLQ P NK+ ++ D+ + + DMF++
Sbjct: 663 SPQLALMIGPEPVGRGEATKKVWQYIKDHNLQSPENKKMLLPDEKFEAIIGPEPVDMFQL 722
Query: 240 NKLLAKHII 248
KLL +H+
Sbjct: 723 PKLLNQHLF 731
Score = 41.2 bits (95), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 35/55 (63%)
Query: 297 QAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNHF 351
+ EATK+VW+YIK ++L+ P N ++L D K ++G E + + ++L ++ F
Sbjct: 677 RGEATKKVWQYIKDHNLQSPENKKMLLPDEKFEAIIGPEPVDMFQLPKLLNQHLF 731
>gi|15618678|ref|NP_224964.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydophila
pneumoniae CWL029]
gi|15836302|ref|NP_300826.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydophila
pneumoniae J138]
gi|16752272|ref|NP_445640.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydophila
pneumoniae AR39]
gi|33242128|ref|NP_877069.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydophila
pneumoniae TW-183]
gi|4377077|gb|AAD18907.1| DNA Topoisomerase I-Fused to SWI Domain [Chlamydophila pneumoniae
CWL029]
gi|7190015|gb|AAF38871.1| DNA topoisomerase I [Chlamydophila pneumoniae AR39]
gi|8979142|dbj|BAA98977.1| DNA topoisomerase I-fused to SWI domain [Chlamydophila pneumoniae
J138]
gi|33236638|gb|AAP98726.1| DNA topoisomerase I [Chlamydophila pneumoniae TW-183]
Length = 871
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 48/78 (61%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
SP+L ++G + R E K++W YI+++ LQ P NK+ ++ D+ L + + DMF++
Sbjct: 792 SPDLAKMIGNEPVSRGEATKKIWDYIKEHQLQAPENKKLLVPDNNLATIIGPNPIDMFQL 851
Query: 240 NKLLAKHIIPLEPTKESS 257
+K L++H+ + + S+
Sbjct: 852 SKHLSQHLTKVSNDESSA 869
>gi|348684557|gb|EGZ24372.1| hypothetical protein PHYSODRAFT_483570 [Phytophthora sojae]
Length = 445
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 44/74 (59%)
Query: 174 NKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDC 233
NK+ +SP L ++G+ + R +K+ WAY++++ LQDP + R I + ++ VF D
Sbjct: 362 NKLYKLSPSLSHLLGKSELTRPAAIKEFWAYVKEHKLQDPKDGRLIHPNQEMKDVFSVDE 421
Query: 234 TDMFKMNKLLAKHI 247
++ LL+KH+
Sbjct: 422 IGFTQVMGLLSKHL 435
>gi|384450061|ref|YP_005662663.1| DNA topoisomerase I [Chlamydophila pneumoniae LPCoLN]
gi|269302557|gb|ACZ32657.1| DNA topoisomerase I [Chlamydophila pneumoniae LPCoLN]
Length = 871
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 48/78 (61%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
SP+L ++G + R E K++W YI+++ LQ P NK+ ++ D+ L + + DMF++
Sbjct: 792 SPDLAKMIGNEPVSRGEATKKIWDYIKEHQLQAPENKKLLVPDNNLATIIGPNPIDMFQL 851
Query: 240 NKLLAKHIIPLEPTKESS 257
+K L++H+ + + S+
Sbjct: 852 SKHLSQHLTKVSNDESSA 869
>gi|334185823|ref|NP_001190034.1| SWIB complex BAF60b domain-containing protein [Arabidopsis
thaliana]
gi|332644915|gb|AEE78436.1| SWIB complex BAF60b domain-containing protein [Arabidopsis
thaliana]
Length = 228
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 67/130 (51%), Gaps = 11/130 (8%)
Query: 163 GAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICD 222
G RRGG ++K+ VS L VGQ + + ++++ Y +NL +P N +I+CD
Sbjct: 28 GVDRRGG---IHKIFPVSESLARFVGQSEVSFSTAMEKVEQYTDDHNLWNPENIEEILCD 84
Query: 223 DALRVVFE--TDCTDMFKMNKLLAKHIIPLEPTKESSKRFKPDAESTTEGMESGPSSVI- 279
D L+ +F+ + +M +LL +H + S + K T E + G + ++
Sbjct: 85 DNLKTIFDGQDKVVGVREMTELLLRH---FPNVRTMSAKVKATGGGTIE--KWGFNDIVK 139
Query: 280 ISEALAKFLG 289
+SE LA+F+G
Sbjct: 140 VSEPLARFVG 149
>gi|440789800|gb|ELR11094.1| SWIB/MDM2 domain containing protein [Acanthamoeba castellanii str.
Neff]
Length = 424
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+SP L +G R +IV +W Y+R N L DP ++R ++CD+ L+ F
Sbjct: 220 LSPALGGALGMHTDTRPKIVLGVWQYVRANRLHDPEDRRYVVCDEVLQEAFGCTRFAASD 279
Query: 239 MNKLLAKHIIPLEP 252
+ +L+++H+ P +P
Sbjct: 280 LTRLVSEHLSPADP 293
Score = 44.3 bits (103), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 9/90 (10%)
Query: 263 DAESTTE---GMESGPSSVIISEALAKFLG--TGGREMLQAEATKRVWEYIKVNHLEDPL 317
DAE+T + ++ P+ +S AL LG T R + VW+Y++ N L DP
Sbjct: 200 DAETTAKIILHLDYAPNRFKLSPALGGALGMHTDTRPKI----VLGVWQYVRANRLHDPE 255
Query: 318 NSMVILCDAKLRELLGCESISALGIQEMLA 347
+ ++CD L+E GC +A + +++
Sbjct: 256 DRRYVVCDEVLQEAFGCTRFAASDLTRLVS 285
>gi|440790421|gb|ELR11704.1| SWIB/MDM2 domain containing protein [Acanthamoeba castellanii str.
Neff]
Length = 424
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+SP L +G R +IV +W Y+R N L DP ++R ++CD+ L+ F
Sbjct: 220 LSPALGGALGMHTDTRPKIVLGVWQYVRANRLHDPEDRRYVVCDEVLQEAFGCTRFAASD 279
Query: 239 MNKLLAKHIIPLEP 252
+ +L+++H+ P +P
Sbjct: 280 LTRLVSEHLSPADP 293
Score = 44.3 bits (103), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 9/90 (10%)
Query: 263 DAESTTE---GMESGPSSVIISEALAKFLG--TGGREMLQAEATKRVWEYIKVNHLEDPL 317
DAE+T + ++ P+ +S AL LG T R + VW+Y++ N L DP
Sbjct: 200 DAETTAKIILHLDYAPNRFKLSPALGGALGMHTDTRPKI----VLGVWQYVRANRLHDPE 255
Query: 318 NSMVILCDAKLRELLGCESISALGIQEMLA 347
+ ++CD L+E GC +A + +++
Sbjct: 256 DRRYVVCDEVLQEAFGCTRFAASDLTRLVS 285
>gi|242782065|ref|XP_002479928.1| SWI-SNF complex subunit (BAF60b), putative [Talaromyces stipitatus
ATCC 10500]
gi|218720075|gb|EED19494.1| SWI-SNF complex subunit (BAF60b), putative [Talaromyces stipitatus
ATCC 10500]
Length = 514
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
VS ELQ ++ ++ I+ +W YIR LQ+ KR+I CD LR++F D +
Sbjct: 291 VSKELQEIIDVEEDTKSGILLGIWDYIRTMKLQEDQEKRQIHCDARLRMIFGRDAVFFPQ 350
Query: 239 MNKLLAKHIIPLEPTK 254
+ +A H PL+P K
Sbjct: 351 IPDAIAAHTAPLDPIK 366
>gi|361130198|gb|EHL02052.1| putative Upstream activation factor subunit spp27 [Glarea
lozoyensis 74030]
Length = 256
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 20/79 (25%)
Query: 171 GGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFE 230
GG +K+ +S L +VG+P +DP +KR+I+CDD L VF+
Sbjct: 189 GGFHKLYILSTPLAELVGEP--------------------KDPGDKRQILCDDRLYSVFK 228
Query: 231 TDCTDMFKMNKLLAKHIIP 249
D MF MNKLL K + P
Sbjct: 229 QDKVHMFTMNKLLGKQLYP 247
>gi|302796039|ref|XP_002979782.1| hypothetical protein SELMODRAFT_59520 [Selaginella moellendorffii]
gi|302807501|ref|XP_002985445.1| hypothetical protein SELMODRAFT_49456 [Selaginella moellendorffii]
gi|300146908|gb|EFJ13575.1| hypothetical protein SELMODRAFT_49456 [Selaginella moellendorffii]
gi|300152542|gb|EFJ19184.1| hypothetical protein SELMODRAFT_59520 [Selaginella moellendorffii]
Length = 79
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 172 GLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFET 231
GLN V +S + G M R + +KQ+W YI+ +NLQDP KR I+ D+ L+
Sbjct: 1 GLNLVVPISAAGRKFFGLQEMSRIDAMKQMWVYIKSHNLQDPEKKRNILPDEKLKQFLSC 60
Query: 232 -DCTDMFKMNKLLAKHI 247
D DM ++ LL+ H
Sbjct: 61 KDRIDMTEIPGLLSPHF 77
Score = 44.3 bits (103), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCES 336
IS A KF G +EM + +A K++W YIK ++L+DP IL D KL++ L C+
Sbjct: 8 ISAAGRKFFGL--QEMSRIDAMKQMWVYIKSHNLQDPEKKRNILPDEKLKQFLSCKD 62
>gi|300122871|emb|CBK23878.2| unnamed protein product [Blastocystis hominis]
Length = 876
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETD 232
VSPELQAV+G R++ +K++W YIR++ LQ+ + ++ I+ D A++ VF TD
Sbjct: 755 VSPELQAVIGCTHCTRSDCLKKIWQYIREHQLQN-AERKCIVNDAAMKAVFGTD 807
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 71/361 (19%), Positives = 142/361 (39%), Gaps = 66/361 (18%)
Query: 2 VSDQEIAKGVETLLRQSDRNASTSLNGVVKQLEAKLGLDLSHKAGFIRDQISLLLRSHPT 61
+S ++ K + +L+ SD T V QLE K G+ L+ + G I+ I+ L
Sbjct: 512 LSKNQLKKEIFEILQNSDLTVLTR-KSVQNQLEQKHGISLADRKGEIKVAINDFL----- 565
Query: 62 PQQVATNTQPQPQPQPQQLPPKDHF--TLQHHPQFSLPPQQFPPHFALHHPHPHLPQFPQ 119
+ +N Q +Q PP +H T + H S + ++L
Sbjct: 566 ---LLSNVISNSQKAKEQTPPDNHTSNTDELHRGGSDDRSKTEESYSLGEEEKREVDLLF 622
Query: 120 ELNFSQPQPSQAAAPPPQPHSNVSKAEAFPQISAEVAKENPPVGAKRRGGPGGLNKVCGV 179
S Q AA PP+ + ++ + +
Sbjct: 623 AQTASASQTENAATVPPETDDSQTERQGYVP----------------------------- 653
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK- 238
+L +VG+ R ++ K+LW YI ++L ++ + CD+ L+ + T T++ K
Sbjct: 654 DADLAVIVGKEEQFRYQMNKRLWKYIYTHDLL---SENTVKCDETLQKL--THKTELKKN 708
Query: 239 ---------MNKLLAKHIIPLE--PTKESSKRFKPDAESTTEGMESGPSSVIISEALAKF 287
+ ++ +H P + P+K+ S++ TT S +S L
Sbjct: 709 EVYISFFSFLLSIIKEHSAPGDPLPSKQKSRQTAAGTVVTTR------KSYKVSPELQAV 762
Query: 288 LGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLA 347
+G +++ K++W+YI+ + L++ I+ DA ++ + G + + ++ I +
Sbjct: 763 IGC--THCTRSDCLKKIWQYIREHQLQNA-ERKCIVNDAAMKAVFGTDEMKSVDIMVVCG 819
Query: 348 R 348
R
Sbjct: 820 R 820
>gi|367054042|ref|XP_003657399.1| hypothetical protein THITE_74967 [Thielavia terrestris NRRL 8126]
gi|347004665|gb|AEO71063.1| hypothetical protein THITE_74967 [Thielavia terrestris NRRL 8126]
Length = 510
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRV-VFETDCTDMF 237
+SPEL V+ R E+V LW YI+ NLQ+ KR CDD LR + + +
Sbjct: 289 LSPELAEVIDMREATRQEVVMALWEYIKLMNLQEDEEKRNFRCDDLLRTQIIPRETGYIP 348
Query: 238 KMNKLLAKHIIPLEPTK 254
++N+ + H+ PL P K
Sbjct: 349 QLNEYITPHLRPLPPIK 365
>gi|365986593|ref|XP_003670128.1| hypothetical protein NDAI_0E00690 [Naumovozyma dairenensis CBS 421]
gi|343768898|emb|CCD24885.1| hypothetical protein NDAI_0E00690 [Naumovozyma dairenensis CBS 421]
Length = 464
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 157 KENPPVGA--KRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPS 214
++N VG K R G K + P L++ +G+ + R + VK++W YI++N LQ PS
Sbjct: 157 RKNGGVGKAKKERKITTGSRKYLLLEP-LKSFLGESELSRQDTVKRIWTYIKQNKLQSPS 215
Query: 215 NKRKIICDDALRVVFE 230
++R+ + D+ L+ +F+
Sbjct: 216 DRREDLWDNKLKSLFQ 231
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 273 SGPSSVIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELL 332
+G ++ E L FLG E+ + + KR+W YIK N L+ P + L D KL+ L
Sbjct: 173 TGSRKYLLLEPLKSFLGES--ELSRQDTVKRIWTYIKQNKLQSPSDRREDLWDNKLKSLF 230
Query: 333 -GCESISA 339
G + I+
Sbjct: 231 QGYQRITV 238
>gi|398412429|ref|XP_003857538.1| SWI/SNF complex protein [Zymoseptoria tritici IPO323]
gi|339477423|gb|EGP92514.1| SWI/SNF complex protein [Zymoseptoria tritici IPO323]
Length = 499
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 61/138 (44%), Gaps = 5/138 (3%)
Query: 115 PQFPQELNFSQPQPSQAAAPPPQPHSNVSKAEAFPQISAEVAKENPPVGAKRRGGPGGLN 174
P ++ + +PQP P P+ + + AEA K + P+ +
Sbjct: 202 PDGTSQIEWRKPQPG-----PQNPNYDANSAEAAFDTLEFTRKSDEPINVTINLVRDEKS 256
Query: 175 KVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCT 234
+ +SPEL ++ R V+ +W Y R LQ+ +KRKIICD+ L+ +F+ D
Sbjct: 257 ERFRLSPELAEILDTEEEDRAGAVQGVWEYCRAMGLQEDDDKRKIICDEPLKRLFKADQV 316
Query: 235 DMFKMNKLLAKHIIPLEP 252
+ L H+ PL P
Sbjct: 317 YFPYVPDHLQHHLHPLPP 334
>gi|297799312|ref|XP_002867540.1| hypothetical protein ARALYDRAFT_354113 [Arabidopsis lyrata subsp.
lyrata]
gi|297313376|gb|EFH43799.1| hypothetical protein ARALYDRAFT_354113 [Arabidopsis lyrata subsp.
lyrata]
Length = 320
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%)
Query: 171 GGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF 229
G L + + L+ VGQ + R ++W+YI+ NNLQDP NK +ICD+ L+ +
Sbjct: 238 GNLIDLVNLPSTLREFVGQSQISRLGCFMRVWSYIKTNNLQDPKNKNVVICDEKLKSIL 296
Score = 45.1 bits (105), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 23/30 (76%)
Query: 303 RVWEYIKVNHLEDPLNSMVILCDAKLRELL 332
RVW YIK N+L+DP N V++CD KL+ +L
Sbjct: 267 RVWSYIKTNNLQDPKNKNVVICDEKLKSIL 296
>gi|412986017|emb|CCO17217.1| nucleosome binding protein [Bathycoccus prasinos]
Length = 346
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 167 RGGPGGLNKVCGVSPELQAVV-GQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDAL 225
R G K S +L+ + GQ + R ++ Q+WAY ++ NL+DP K+ +I DD L
Sbjct: 262 RSENSGFKKPYKCSEKLKTFLNGQETITRAQLTSQMWAYFKEKNLKDPEKKQFVISDDKL 321
Query: 226 RVVFETDCTDMFKMNKLLAKHIIPL 250
+ F K L+K +IP+
Sbjct: 322 FKLIGERRFKAFGFMKYLSKDLIPM 346
Score = 44.7 bits (104), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 281 SEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISAL 340
SE L FL G + +A+ T ++W Y K +L+DP ++ D KL +L+G A
Sbjct: 275 SEKLKTFL-NGQETITRAQLTSQMWAYFKEKNLKDPEKKQFVISDDKLFKLIGERRFKAF 333
Query: 341 GIQEMLARN 349
G + L+++
Sbjct: 334 GFMKYLSKD 342
>gi|429849593|gb|ELA24958.1| serine threonine protein [Colletotrichum gloeosporioides Nara gc5]
Length = 1279
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMF- 237
+SPEL VV R E+V +W YI+ LQ+ KR CDD LR + + M
Sbjct: 1056 LSPELAEVVDMTEASRQEVVLAVWEYIKMMGLQEDEEKRNFRCDDLLRKIINGNDVGMIP 1115
Query: 238 KMNKLLAKHIIPLEP 252
+N + H+ PL P
Sbjct: 1116 NLNDYIQPHLRPLPP 1130
>gi|15236880|ref|NP_194411.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]
gi|186513923|ref|NP_001119064.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]
gi|4455204|emb|CAB36527.1| putative protein [Arabidopsis thaliana]
gi|7269533|emb|CAB79536.1| putative protein [Arabidopsis thaliana]
gi|38566544|gb|AAR24162.1| At4g26810 [Arabidopsis thaliana]
gi|40823827|gb|AAR92306.1| At4g26810 [Arabidopsis thaliana]
gi|332659855|gb|AEE85255.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]
gi|332659856|gb|AEE85256.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]
Length = 106
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%)
Query: 171 GGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF 229
G L + + L+ VGQ + R ++W+YI+ NNLQDP NK +ICD+ L+ +
Sbjct: 18 GNLIDLVNLPSTLRNFVGQSQISRLGCFMRVWSYIKTNNLQDPKNKNVVICDEKLKSIL 76
Score = 45.1 bits (105), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 23/30 (76%)
Query: 303 RVWEYIKVNHLEDPLNSMVILCDAKLRELL 332
RVW YIK N+L+DP N V++CD KL+ +L
Sbjct: 47 RVWSYIKTNNLQDPKNKNVVICDEKLKSIL 76
>gi|297601729|ref|NP_001051349.2| Os03g0761000 [Oryza sativa Japonica Group]
gi|255674919|dbj|BAF13263.2| Os03g0761000 [Oryza sativa Japonica Group]
Length = 121
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 31/40 (77%)
Query: 172 GLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQ 211
GL K VSP LQAVVG +PRTE +K+LWAYI+++NLQ
Sbjct: 66 GLTKPRLVSPALQAVVGAAEIPRTEALKRLWAYIKQHNLQ 105
>gi|83314990|ref|XP_730600.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23490371|gb|EAA22165.1| hypothetical protein [Plasmodium yoelii yoelii]
Length = 111
Score = 52.0 bits (123), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 33/63 (52%)
Query: 170 PGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF 229
P GL C + L+ + R ++K W YI+ NNLQDP KRKII D L+ V
Sbjct: 48 PNGLQIDCEIKSPLKEFLNTDTASRVFVLKYAWKYIKDNNLQDPDMKRKIIPDQKLKQVL 107
Query: 230 ETD 232
E D
Sbjct: 108 EKD 110
>gi|294865385|ref|XP_002764397.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239863683|gb|EEQ97114.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 94
Score = 52.0 bits (123), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 36/54 (66%)
Query: 172 GLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDAL 225
G++++C +SPEL +VG R ++ K+LW YI+ +NLQ+ ++KR I D L
Sbjct: 27 GIHQLCALSPELTTIVGVLKASRVDVNKKLWVYIKSHNLQETTDKRNIKPDAVL 80
>gi|409076202|gb|EKM76575.1| hypothetical protein AGABI1DRAFT_115684 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426193445|gb|EKV43378.1| hypothetical protein AGABI2DRAFT_195037 [Agaricus bisporus var.
bisporus H97]
Length = 415
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+S EL V+G R +V+ LW YI+ NLQD +++R I D+ LR++F + +
Sbjct: 199 LSTELSQVLGIKEDSRLGVVQTLWNYIKLQNLQDKADRRMIHADEKLRMIFGAETIAFQQ 258
Query: 239 MNKLLAKHIIPLEPT 253
+ +L+ +H+ EP
Sbjct: 259 IPELVNRHLTAPEPV 273
Score = 41.6 bits (96), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 275 PSSVIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGC 334
P +S L++ LG +E + + +W YIK+ +L+D + +I D KLR + G
Sbjct: 194 PEQYRLSTELSQVLGI--KEDSRLGVVQTLWNYIKLQNLQDKADRRMIHADEKLRMIFGA 251
Query: 335 ESISALGIQEMLARN 349
E+I+ I E++ R+
Sbjct: 252 ETIAFQQIPELVNRH 266
>gi|322510600|gb|ADX05914.1| SWIB-domain-containing protein [Organic Lake phycodnavirus 1]
Length = 202
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 169 GPGGLNKVCGVSPELQAVVGQ---PAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDAL 225
P G K +S EL + + M RTE+ K++ AYIR+ +LQD +N RKI+ D +L
Sbjct: 112 APSGFVKPTKISDELAVFLKKEKGSMMARTEVTKEMTAYIREKSLQDKANGRKILPDASL 171
Query: 226 RVVFETDCTD---MFKMNKLLAKHI 247
+ + +D F + K ++ H
Sbjct: 172 KKLLNLSASDELTYFNLQKYMSPHF 196
Score = 38.1 bits (87), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 280 ISEALAKFLGT-GGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELL---GCE 335
IS+ LA FL G M + E TK + YI+ L+D N IL DA L++LL +
Sbjct: 122 ISDELAVFLKKEKGSMMARTEVTKEMTAYIREKSLQDKANGRKILPDASLKKLLNLSASD 181
Query: 336 SISALGIQEMLA 347
++ +Q+ ++
Sbjct: 182 ELTYFNLQKYMS 193
>gi|406601457|emb|CCH46907.1| hypothetical protein BN7_6512 [Wickerhamomyces ciferrii]
Length = 425
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
S EL +++G + + + V +W YI+ NNLQ P +KR I CD+ L +F + +
Sbjct: 219 SNELSSLLGVNELTQHDAVYSIWQYIQFNNLQAPEDKRIINCDENLSKLFNVPRFNFRDL 278
Query: 240 NKLLAKHIIPLEPTKESSKRFKPDAEST 267
+LL+KH+ P +P E + K D ST
Sbjct: 279 IELLSKHLSP-KPPIEINYEIKVDKSST 305
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 274 GPSSVIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLG 333
P +I S L+ LG E+ Q +A +W+YI+ N+L+ P + +I CD L +L
Sbjct: 212 SPIKLITSNELSSLLGVN--ELTQHDAVYSIWQYIQFNNLQAPEDKRIINCDENLSKLFN 269
Query: 334 CESISALGIQEMLAR 348
+ + E+L++
Sbjct: 270 VPRFNFRDLIELLSK 284
>gi|403414980|emb|CCM01680.1| predicted protein [Fibroporia radiculosa]
Length = 418
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
V PEL ++G RT +V+ LW YI+ LQD ++R I D ALR +F D
Sbjct: 201 VQPELGNILGLQEETRTGVVQALWNYIKSQGLQDKVDRRAIRADSALRPIFGADSMLFQH 260
Query: 239 MNKLLAKHIIPLEP 252
+ +L+ + + P +P
Sbjct: 261 LPELVNRFLQPADP 274
>gi|393221096|gb|EJD06581.1| SWI/SNF complex protein [Fomitiporia mediterranea MF3/22]
Length = 416
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 81/196 (41%), Gaps = 21/196 (10%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
V PEL A++ R IV LW YI+ NNLQD ++R I D+ L+ +F T+ +
Sbjct: 197 VHPELGALLDIKEDSRVGIVTALWNYIKLNNLQDKVDRRVIRLDNRLKALFHTENVSFQQ 256
Query: 239 MNKL------------LAKHIIPLEPTKESSKRFKPDAESTTEGMESGPSSVII--SEAL 284
+ +L L HI P EP + + F + + ++S + VI+ S
Sbjct: 257 LPELVNHYFQPPDPIVLFYHIKPNEPPPTTPQAFDIEVKVEDTSLKSRQNQVIVNMSSET 316
Query: 285 AKFLGTGGREM------LQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESIS 338
A+ + E +Q KR + + D +N + L +L
Sbjct: 317 ARDIAKNDEETALLAQQIQNSQLKRTFLEAFADDPADFINKWLASQSRDLESVLAAGPSE 376
Query: 339 ALGI-QEMLARNHFLR 353
L + +E L R+ F R
Sbjct: 377 GLTVREEELKRSEFFR 392
>gi|449457359|ref|XP_004146416.1| PREDICTED: protein TRI1-like [Cucumis sativus]
Length = 127
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 183 LQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF 229
L+ VG + R K +W+YI+ NNLQDP+NK +ICD+ L+ +
Sbjct: 30 LREFVGHSQISRLGCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSIL 76
Score = 44.3 bits (103), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 256 SSKRFKPDAESTTEGMESGPSSVIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLED 315
++KR K + + + V + L +F+G ++ + K VW YIK N+L+D
Sbjct: 2 ATKRMKMAITDNPKKLANLIDLVNLPSTLREFVGHS--QISRLGCFKCVWSYIKTNNLQD 59
Query: 316 PLNSMVILCDAKLRELL 332
P N V++CD KL+ +L
Sbjct: 60 PTNKNVVICDEKLKSIL 76
>gi|125584667|gb|EAZ25331.1| hypothetical protein OsJ_09143 [Oryza sativa Japonica Group]
Length = 1701
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 179 VSPELQAVVG------QPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETD 232
SPEL VG Q + + ++ L YI++NNL+DP K +IICD L +F
Sbjct: 350 ASPELLEFVGHMRDGDQSFISQFDVQALLLDYIKQNNLRDPQRKSQIICDSRLHRLFRKT 409
Query: 233 CTDMFKMNKLLAKHIIPLEPT 253
F+M KLL H I EP+
Sbjct: 410 RVAHFEMLKLLEMHFIVSEPS 430
>gi|406988976|gb|EKE08806.1| hypothetical protein ACD_16C00251G0001 [uncultured bacterium]
Length = 124
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 38/69 (55%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+S L V G R +++K++WAYI+KN LQD N+R I D L V +M K
Sbjct: 53 LSASLATVCGTKKCSRPQVMKKVWAYIKKNKLQDNQNRRMINPDQKLGSVLGDRPINMLK 112
Query: 239 MNKLLAKHI 247
M L+KH+
Sbjct: 113 MAGALSKHL 121
Score = 38.1 bits (87), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISA 339
+S +LA GT ++ + + K+VW YIK N L+D N +I D KL +LG I+
Sbjct: 53 LSASLATVCGT--KKCSRPQVMKKVWAYIKKNKLQDNQNRRMINPDQKLGSVLGDRPINM 110
Query: 340 LGIQEMLAR 348
L + L++
Sbjct: 111 LKMAGALSK 119
>gi|392563707|gb|EIW56886.1| SWI/SNF complex 60 kDa subunit [Trametes versicolor FP-101664 SS1]
Length = 432
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
V PEL V+G RT +++ LW YI+ NLQD ++R + D LR +F D
Sbjct: 215 VHPELGNVLGVKEDSRTGVIQALWNYIKTQNLQDKVDRRVVRADARLRPIFNADTAYFQH 274
Query: 239 MNKLLAKHIIPLEP 252
+ +L+ + ++P +P
Sbjct: 275 LPELVNRFLLPPDP 288
>gi|218191952|gb|EEC74379.1| hypothetical protein OsI_09704 [Oryza sativa Indica Group]
Length = 1796
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 179 VSPELQAVVG------QPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETD 232
SPEL VG Q + + ++ L YI++NNL+DP K +IICD L +F
Sbjct: 350 ASPELLEFVGHMRDGDQSFISQFDVQALLLDYIKQNNLRDPQRKSQIICDSRLHRLFRKT 409
Query: 233 CTDMFKMNKLLAKHIIPLEPT 253
F+M KLL H I EP+
Sbjct: 410 RVAHFEMLKLLEMHFIVSEPS 430
>gi|343183589|gb|AEM01134.1| DNA topoisomerase I [Estrella lausannensis]
Length = 872
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 183 LQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDC-TDMFKMNK 241
L+ + + M R +I K++W YI++ LQD ++KR I+ D L V TD +MFK+
Sbjct: 804 LKDFLAKDTMSRGDITKEVWVYIKEKGLQDANDKRLIVPDKKLAKVLGTDEPVNMFKLPG 863
Query: 242 LLAKHI 247
LL K+I
Sbjct: 864 LLNKYI 869
>gi|453086120|gb|EMF14162.1| hypothetical protein SEPMUDRAFT_147969 [Mycosphaerella populorum
SO2202]
Length = 506
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+SPEL ++ R V+ +W Y R LQ+ +KRKIICD AL+ +F+ +
Sbjct: 262 LSPELAEILDTDEEDRAGAVQGIWEYCRAMGLQEDDDKRKIICDAALQKIFKQETVYFPY 321
Query: 239 MNKLLAKHIIPLEP 252
+ LL H+ PL P
Sbjct: 322 VPDLLLHHMSPLPP 335
>gi|393235447|gb|EJD43002.1| SWI/SNF complex 60 kDa subunit [Auricularia delicata TFB-10046 SS5]
Length = 408
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%)
Query: 178 GVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMF 237
++P+L V+ RT IV LW YI+ N LQD +++ I D LR +F D
Sbjct: 189 ALAPDLARVLDIQEDTRTNIVTALWNYIKVNGLQDKVDRKIIRADAELRPIFGADTVQFH 248
Query: 238 KMNKLLAKHIIP 249
+N+L+ + ++P
Sbjct: 249 DLNQLINRFLMP 260
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 304 VWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNHFL 352
+W YIKVN L+D ++ +I DA+LR + G +++ + +++ N FL
Sbjct: 212 LWNYIKVNGLQDKVDRKIIRADAELRPIFGADTVQFHDLNQLI--NRFL 258
>gi|449516657|ref|XP_004165363.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Cucumis
sativus]
Length = 560
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+SP L V+G R+ I+ LW Y++ N LQ+ S+ CD LR VF +
Sbjct: 348 LSPSLSDVLGIETDTRSRIMAALWHYVKANKLQNSSDPSFFTCDPGLRKVFGEEKVKFSM 407
Query: 239 MNKLLAKHIIPLEP 252
+ + +++H+IP +P
Sbjct: 408 VTQKISQHLIPPQP 421
>gi|449438216|ref|XP_004136885.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Cucumis
sativus]
Length = 560
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+SP L V+G R+ I+ LW Y++ N LQ+ S+ CD LR VF +
Sbjct: 348 LSPSLSDVLGIETDTRSRIMAALWHYVKANKLQNSSDPSFFTCDPGLRKVFGEEKVKFSM 407
Query: 239 MNKLLAKHIIPLEP 252
+ + +++H+IP +P
Sbjct: 408 VTQKISQHLIPPQP 421
>gi|452983260|gb|EME83018.1| hypothetical protein MYCFIDRAFT_36632 [Pseudocercospora fijiensis
CIRAD86]
Length = 476
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+SPEL ++ R V+ +W Y R LQ+ +KRKIICD+ LR +F+ D
Sbjct: 238 LSPELAEILDTEEEDRAGAVQGIWEYCRAMGLQEDDDKRKIICDEPLRKLFKADQVYFPY 297
Query: 239 MNKLLAKHIIPLEPTK 254
+ L H+ PL P +
Sbjct: 298 VPDALVAHLHPLPPIQ 313
>gi|414880478|tpg|DAA57609.1| TPA: hypothetical protein ZEAMMB73_873535 [Zea mays]
Length = 1254
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 13/119 (10%)
Query: 174 NKVCGVSPELQAVVGQPAMPRTEIVKQ------LWAYIRKNNLQDPSNKRKIICDDALRV 227
++V S EL V ++ Q L YI++NNL+DP K +IICD L+
Sbjct: 196 DEVSWASKELINFVAHARNGDKSVINQYDVQPLLLDYIKRNNLRDPRRKSQIICDSLLQS 255
Query: 228 VFETDCTDMFKMNKLLAKH-----IIPLEPTKESSKRFKPDAESTTEGMESGPSSVIIS 281
+F D F+M KLL H + P++ + PD +G + +SV++S
Sbjct: 256 LFGKDRVGHFEMLKLLESHFPTSEVSPIDADENHGGVVDPDPSQDADG--NSEASVVMS 312
>gi|322693321|gb|EFY85185.1| putative 3-phosphoinositide dependent protein kinase-1 (PDK1)
[Metarhizium acridum CQMa 102]
Length = 1212
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDAL-RVVFETDCTDMF 237
+SPEL VV + E V LW YIR NLQ+ KR CD+ L +VV D +
Sbjct: 994 LSPELAEVVDMSEATQQEAVAALWEYIRFWNLQEDEEKRNFRCDELLKKVVGRGDIGYIP 1053
Query: 238 KMNKLLAKHIIPLEP 252
+N+ + +H+ PL P
Sbjct: 1054 MLNEYVTQHLRPLPP 1068
>gi|15834637|ref|NP_296396.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia muridarum
Nigg]
gi|270284803|ref|ZP_06194197.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia muridarum
Nigg]
gi|270288832|ref|ZP_06195134.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia muridarum
Weiss]
gi|301336183|ref|ZP_07224385.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia muridarum
MopnTet14]
gi|7190053|gb|AAF38905.1| DNA topoisomerase I [Chlamydia muridarum Nigg]
Length = 865
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 180 SPELQAVVG-QPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
S L AV+G P E K++WAYI++ LQ P+NKR I+ D ++ V D DMF
Sbjct: 793 SSALAAVIGPDPIDGFPEATKKIWAYIKEQGLQSPNNKRVIVPDSKMKHVIGDDPIDMFA 852
Query: 239 MNKLLAKHIIPLE 251
++K + H+ E
Sbjct: 853 LSKKIQAHLTKQE 865
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 299 EATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNHFLRQ 354
EATK++W YIK L+ P N VI+ D+K++ ++G + I + + + + H +Q
Sbjct: 810 EATKKIWAYIKEQGLQSPNNKRVIVPDSKMKHVIGDDPIDMFALSKKI-QAHLTKQ 864
>gi|159163143|pdb|1UHR|A Chain A, Solution Structure Of The Swib Domain Of Mouse Brg1-
Associated Factor 60a
Length = 93
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+ P L ++G R I++ LW YI+ + LQDP + ++CD L+ +FE+ +
Sbjct: 14 LDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVLCDKYLQQIFESQRMKFSE 73
Query: 239 MNKLLAKHIIPLEPTKESS 257
+ + L ++P EP+ SS
Sbjct: 74 IPQRLHALLMPPEPSGPSS 92
>gi|164659334|ref|XP_001730791.1| hypothetical protein MGL_1790 [Malassezia globosa CBS 7966]
gi|159104689|gb|EDP43577.1| hypothetical protein MGL_1790 [Malassezia globosa CBS 7966]
Length = 202
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 32/46 (69%)
Query: 173 LNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRK 218
LN+ +S ++ V G MPR E+VK+LW YI+ +NLQ+ SNKR+
Sbjct: 131 LNRPLRLSSDMAEVCGGSEMPRFEVVKKLWVYIKDHNLQNESNKRQ 176
>gi|169854889|ref|XP_001834116.1| SWI/SNF complex 60 kDa subunit [Coprinopsis cinerea okayama7#130]
gi|116504816|gb|EAU87711.1| SWI/SNF complex 60 kDa subunit [Coprinopsis cinerea okayama7#130]
Length = 407
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
++PEL V+G R IV+ LW YI+ N LQD ++R I D+ LR +F D +
Sbjct: 193 LAPELADVLGIKEDSRLGIVQTLWNYIKSNGLQDKVDRRMIRADEKLRPIFGGDVIPFAR 252
Query: 239 MNKLLAKHIIPLEPT 253
+ +++ +++ EP
Sbjct: 253 LPEVVNRYLTHPEPV 267
>gi|357289819|gb|AET73132.1| hypothetical protein PGAG_00243 [Phaeocystis globosa virus 12T]
gi|357292619|gb|AET73955.1| hypothetical protein PGBG_00247 [Phaeocystis globosa virus 14T]
Length = 228
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 11/94 (11%)
Query: 165 KRRG--GPGGLNKVCGVSPELQAVVGQP---AMPRTEIVKQLWAYIRKNNLQDPSNKRKI 219
KR+G P G K +S EL +G+ M RT++ +++ YIR N LQD N R I
Sbjct: 126 KRKGTRAPSGFVKPSPISDELATFLGKAPGTEMARTDVTREINKYIRGNELQDKENGRII 185
Query: 220 ICDDALRVVFETDCTD------MFKMNKLLAKHI 247
D AL+ + + D D F + K ++ H
Sbjct: 186 KADAALKALLKLDDADPSVVLTYFNLQKYMSPHF 219
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 280 ISEALAKFLGTG-GREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCE 335
IS+ LA FLG G EM + + T+ + +YI+ N L+D N +I DA L+ LL +
Sbjct: 142 ISDELATFLGKAPGTEMARTDVTREINKYIRGNELQDKENGRIIKADAALKALLKLD 198
>gi|91107221|gb|ABE11612.1| SWIb domain-containing protein [Solanum chacoense]
Length = 100
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
Query: 148 FPQISAEVAKENPPVGAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRK 207
PQ +V +NP A L + + L+ +GQ R K++W+YI++
Sbjct: 2 LPQRMKKVMTDNPKKLA-------NLIDLVNLPSTLREFMGQSQTSRLGCFKRVWSYIKE 54
Query: 208 NNLQDPSNKRKIICDDALRVVF 229
NNLQDP+NK + CD+ L+ V
Sbjct: 55 NNLQDPNNKNLVNCDEKLKSVL 76
Score = 42.0 bits (97), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 278 VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELL 332
V + L +F+G L KRVW YIK N+L+DP N ++ CD KL+ +L
Sbjct: 24 VNLPSTLREFMGQSQTSRLGC--FKRVWSYIKENNLQDPNNKNLVNCDEKLKSVL 76
>gi|261200521|ref|XP_002626661.1| SWI-SNF complex subunit [Ajellomyces dermatitidis SLH14081]
gi|239593733|gb|EEQ76314.1| SWI-SNF complex subunit [Ajellomyces dermatitidis SLH14081]
gi|239607389|gb|EEQ84376.1| SWI-SNF complex subunit [Ajellomyces dermatitidis ER-3]
gi|327352374|gb|EGE81231.1| SWI-SNF complex subunit [Ajellomyces dermatitidis ATCC 18188]
Length = 506
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 79/202 (39%), Gaps = 25/202 (12%)
Query: 63 QQVATNTQPQPQPQPQQLPPKDHFTLQHHPQFSLPPQQFPPHF------ALHHPHPHLPQ 116
+Q TN Q P + LP K + H SLP ++ HF L P
Sbjct: 177 EQTKTNGQRDPDAMEEDLPQKQKKRTKKH---SLPQRKRLSHFFKSITVELDKTAPSGVA 233
Query: 117 FPQELNFSQPQ-PSQAAAPPPQPHSNVSKAEAFPQISAEVAKE---NPPVGAKRRGGPGG 172
+N+++P PS A + PP + F + A E N + R P
Sbjct: 234 DLATINWTKPAIPSSAVSLPP--------SADFDSLEFSRAAEVNLNATISLVRDENPER 285
Query: 173 LNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETD 232
+S EL +++ R IV +W YI+ LQ+ KR + CDD L+ +F D
Sbjct: 286 FK----LSKELASILDTDEEARGGIVLGIWEYIKAMELQESEEKRAVRCDDRLKALFNRD 341
Query: 233 CTDMFKMNKLLAKHIIPLEPTK 254
+ + H PL+P K
Sbjct: 342 KMFFPAIPDSASAHTSPLDPIK 363
>gi|307109486|gb|EFN57724.1| hypothetical protein CHLNCDRAFT_57254 [Chlorella variabilis]
Length = 571
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 185 AVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKII--CDDALRVVFETDCTDMFKMNKL 242
A+ G +MP +++ LW YI+ L +PS+K + CD+ LR +F TD ++ KM +
Sbjct: 276 ALRGLHSMP--FVMQMLWGYIKAKQLYEPSDKGSVCVRCDERLRPLFGTDSVELGKMAEA 333
Query: 243 LAKHIIPLEPTKESSKRFKPDAEST 267
L +H+ EP K KPD +
Sbjct: 334 LKQHLTLPEPVKLQYT-IKPDGSAA 357
>gi|170097153|ref|XP_001879796.1| SWI/SNF complex protein [Laccaria bicolor S238N-H82]
gi|164645199|gb|EDR09447.1| SWI/SNF complex protein [Laccaria bicolor S238N-H82]
Length = 382
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
V PEL ++G R +++ W YI+ LQD ++R + DD LR +F TD K
Sbjct: 166 VVPELGNILGIKEDSRIGVIQTFWNYIKLQGLQDKVDRRLVRADDKLRQIFGTDTIPFQK 225
Query: 239 MNKLLAKHIIPLEPT 253
+ L+ ++++ +P
Sbjct: 226 IPDLVNRYLVAPDPV 240
>gi|51703908|gb|AAH81086.1| Smarcd1 protein, partial [Xenopus laevis]
Length = 504
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 170 PGGLNKVCGV-------------SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
PG LN C V P L ++G R I++ LW YI+ + LQDP +
Sbjct: 264 PGDLNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHER 323
Query: 217 RKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEP 252
IICD L+ +FE+ ++ + L ++P EP
Sbjct: 324 EFIICDKYLQQIFESQRMKFSEIPQRLHALLMPPEP 359
>gi|389743096|gb|EIM84281.1| SWI/SNF complex subunit [Stereum hirsutum FP-91666 SS1]
Length = 414
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 35/55 (63%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDC 233
V P+L +V+G R +++ LW YI+ N LQD +++++I D ALR +F+ D
Sbjct: 195 VHPDLGSVLGIKEDSRAGVIQTLWNYIKINGLQDKADRKRIHIDAALRPIFQVDA 249
>gi|218563706|ref|NP_001136258.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 1 [Xenopus laevis]
gi|118763700|gb|AAI28686.1| Smarcd1 protein [Xenopus laevis]
Length = 507
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 170 PGGLNKVCGV-------------SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
PG LN C V P L ++G R I++ LW YI+ + LQDP +
Sbjct: 267 PGDLNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHER 326
Query: 217 RKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEP 252
IICD L+ +FE+ ++ + L ++P EP
Sbjct: 327 EFIICDKYLQQIFESQRMKFSEIPQRLHALLMPPEP 362
>gi|63101474|gb|AAH94473.1| Smarcd1 protein, partial [Xenopus laevis]
gi|84708640|gb|AAI10939.1| Smarcd1 protein [Xenopus laevis]
Length = 496
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 170 PGGLNKVCGV-------------SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
PG LN C V P L ++G R I++ LW YI+ + LQDP +
Sbjct: 256 PGDLNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHER 315
Query: 217 RKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEP 252
IICD L+ +FE+ ++ + L ++P EP
Sbjct: 316 EFIICDKYLQQIFESQRMKFSEIPQRLHALLMPPEP 351
>gi|28278760|gb|AAH45009.1| Smarcd1 protein, partial [Xenopus laevis]
Length = 481
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 170 PGGLNKVCGV-------------SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
PG LN C V P L ++G R I++ LW YI+ + LQDP +
Sbjct: 241 PGDLNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHER 300
Query: 217 RKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEP 252
IICD L+ +FE+ ++ + L ++P EP
Sbjct: 301 EFIICDKYLQQIFESQRMKFSEIPQRLHALLMPPEP 336
>gi|297819474|ref|XP_002877620.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297323458|gb|EFH53879.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 204
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 75/148 (50%), Gaps = 10/148 (6%)
Query: 171 GGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFE 230
G ++K+ VS L VGQ + + ++++ Y ++L +P N +I+CDD L+ +F+
Sbjct: 33 GEIHKIFPVSESLARFVGQSEISFSTAMEKVEQYTDDHDLWNPENIEEILCDDNLKTIFD 92
Query: 231 T--DCTDMFKMNKLLAKHIIPLEPTKESSKRFKPDAESTTEGMESGPSSVI-ISEALAKF 287
+ +M +LL +H + S + K T E + G + ++ +SE LA+F
Sbjct: 93 GKEKVVGVREMTELLLRH---FPNVRNMSAKVKATGGGTIE--KWGFNDIVEVSEPLARF 147
Query: 288 LGTGGREMLQAEATKRVWEYIKVNHLED 315
+G E+ A +++ EY K + L D
Sbjct: 148 VGRS--EISFVAALRKLLEYTKDHDLLD 173
>gi|50418293|gb|AAH77955.1| Smarcd1 protein, partial [Xenopus laevis]
Length = 513
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 170 PGGLNKVCGV-------------SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
PG LN C V P L ++G R I++ LW YI+ + LQDP +
Sbjct: 273 PGDLNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHER 332
Query: 217 RKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEP 252
IICD L+ +FE+ ++ + L ++P EP
Sbjct: 333 EFIICDKYLQQIFESQRMKFSEIPQRLHALLMPPEP 368
>gi|67527965|ref|XP_661829.1| hypothetical protein AN4225.2 [Aspergillus nidulans FGSC A4]
gi|40740134|gb|EAA59324.1| hypothetical protein AN4225.2 [Aspergillus nidulans FGSC A4]
Length = 925
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 39/76 (51%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+S EL V+ R+ IV +W YIR LQ+ KR + CDD LR +F D +
Sbjct: 703 LSKELAEVLDVEEETRSGIVLGIWDYIRAMGLQEDEEKRLVRCDDRLRAIFGRDQMFFPQ 762
Query: 239 MNKLLAKHIIPLEPTK 254
+ + + H PL+P K
Sbjct: 763 IPESIGPHTSPLDPIK 778
>gi|343183576|gb|AEM01128.1| DNA topoisomerase I [Criblamydia sequanensis]
Length = 872
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDAL-RVVFETDCTDMF 237
VS EL+A+V + + + K++W YI+ +LQD ++KR I D L +V+ +D +M
Sbjct: 797 VSKELEAIVKEKELSFGDATKKVWEYIKDKDLQDKNDKRSINPDKTLSKVLGSSDSINML 856
Query: 238 KMNKLLAKHIIPLE 251
K+ L KH+ E
Sbjct: 857 KLGAHLKKHLTKKE 870
>gi|407916883|gb|EKG10213.1| hypothetical protein MPH_12813 [Macrophomina phaseolina MS6]
Length = 510
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFET-DCTDMF 237
+SP L ++G R I+ +W Y++ NNLQ+ + RKI CD L+++FE D
Sbjct: 286 LSPPLAELLGTEEDDRGGILMGIWIYVKANNLQEDEDSRKIRCDAQLKLLFENRDFVPFP 345
Query: 238 KMNKLLAKHIIPLEP 252
++ +L+ H+ PL P
Sbjct: 346 EIPRLILPHLSPLPP 360
>gi|259481167|tpe|CBF74446.1| TPA: SWI-SNF complex subunit (BAF60b), putative (AFU_orthologue;
AFUA_1G06310) [Aspergillus nidulans FGSC A4]
Length = 472
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 39/76 (51%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+S EL V+ R+ IV +W YIR LQ+ KR + CDD LR +F D +
Sbjct: 250 LSKELAEVLDVEEETRSGIVLGIWDYIRAMGLQEDEEKRLVRCDDRLRAIFGRDQMFFPQ 309
Query: 239 MNKLLAKHIIPLEPTK 254
+ + + H PL+P K
Sbjct: 310 IPESIGPHTSPLDPIK 325
>gi|452844258|gb|EME46192.1| hypothetical protein DOTSEDRAFT_60862 [Dothistroma septosporum
NZE10]
Length = 451
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%)
Query: 174 NKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDC 233
N+ +SPEL ++ R V+ +W Y R LQ+ +KRKI+CD+ LR +F+ D
Sbjct: 232 NERFKLSPELAEILDTEEEDRAGAVQGIWEYCRAMGLQEDDDKRKIVCDEPLRKLFKQDT 291
Query: 234 TDMFKMNKLLAKHIIPLEPTK 254
+ L H+ PL P +
Sbjct: 292 VYFPYVPDQLLPHMQPLPPVQ 312
>gi|298713032|emb|CBJ33455.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 255
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%)
Query: 197 IVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEPTKES 256
+ K +WAYIR +LQDP ++RKI DD + VF+ +M + K L+ H+ L ES
Sbjct: 56 VTKAVWAYIRAESLQDPKDRRKIRNDDKMFPVFKCKTMNMMHIAKKLSPHLKKLSDLVES 115
>gi|390596308|gb|EIN05710.1| BAR-domain-containing protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 1103
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%)
Query: 175 KVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCT 234
+V V PEL ++G R +++ LW YI+ LQD ++R I DD L+ +F D
Sbjct: 193 EVFKVHPELGDILGIKEESRVGVLQTLWNYIKIQGLQDKVDRRMIRADDKLKPIFGADTV 252
Query: 235 DMFKMNKLLAKHIIPLEP 252
++ ++ + ++P +P
Sbjct: 253 PFQQLPEIAMRFLLPADP 270
>gi|1549243|gb|AAC50695.1| SWI/SNF complex 60 KDa subunit [Homo sapiens]
Length = 435
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 170 PGGLNKVCGV-------------SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
PG +N C V P L ++G R I++ LW YI+ + LQDP +
Sbjct: 236 PGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHER 295
Query: 217 RKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEP 252
+ICD L+ +FET ++ + L ++P EP
Sbjct: 296 EFVICDKYLQQIFETQRMKFSEIPQRLHALLMPPEP 331
>gi|170097161|ref|XP_001879800.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164645203|gb|EDR09451.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 404
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%)
Query: 175 KVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCT 234
+V PEL ++G R +++ W YI+ LQD ++R + DD LR +F TD
Sbjct: 173 RVVMYVPELGNILGIKEDSRIGVIQTFWNYIKLQGLQDKVDRRLVRADDKLRQIFGTDTI 232
Query: 235 DMFKMNKLLAKHIIPLEP 252
K+ L+ ++++ +P
Sbjct: 233 PFQKIPDLVNRYLVAPDP 250
>gi|449541820|gb|EMD32802.1| hypothetical protein CERSUDRAFT_143379 [Ceriporiopsis subvermispora
B]
Length = 411
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMF- 237
V P+L +V+G RT +V+ LW YI+ +NLQD ++R + D LR +F T +F
Sbjct: 193 VHPDLGSVLGLKEDSRTGVVQALWNYIKIHNLQDKVDRRVVRADAHLRPLFGPQETILFQ 252
Query: 238 KMNKLLAKHIIPLEPT 253
++ +L +++IP +P
Sbjct: 253 QLPELANRYLIPPDPV 268
>gi|52345630|ref|NP_001004862.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 1 [Xenopus (Silurana)
tropicalis]
gi|49250469|gb|AAH74701.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 1 [Xenopus (Silurana)
tropicalis]
Length = 508
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 170 PGGLNKVCGV-------------SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
PG +N C V P L ++G R I++ LW YI+ + LQDP +
Sbjct: 268 PGDMNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHER 327
Query: 217 RKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEP 252
IICD L+ +FE+ ++ + L ++P EP
Sbjct: 328 EFIICDKYLQQIFESQRMKFSEIPQRLHALLMPPEP 363
>gi|89267384|emb|CAJ82676.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 1 [Xenopus (Silurana)
tropicalis]
Length = 508
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 170 PGGLNKVCGV-------------SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
PG +N C V P L ++G R I++ LW YI+ + LQDP +
Sbjct: 268 PGDMNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHER 327
Query: 217 RKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEP 252
IICD L+ +FE+ ++ + L ++P EP
Sbjct: 328 EFIICDKYLQQIFESQRMKFSEIPQRLHALLMPPEP 363
>gi|297735049|emb|CBI17411.3| unnamed protein product [Vitis vinifera]
Length = 1362
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 6/82 (7%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQ------LWAYIRKNNLQDPSNKRKIICDDALRVVFETD 232
S EL +VG T ++ Q L YI++NNL+DP K +IICD LR +F
Sbjct: 339 ASKELLELVGHMKNGDTSVLSQFDVQALLLEYIKRNNLRDPRRKSQIICDMRLRNLFGKA 398
Query: 233 CTDMFKMNKLLAKHIIPLEPTK 254
F+M KLL H + E ++
Sbjct: 399 RVGHFEMLKLLESHFLIKEHSR 420
>gi|449304544|gb|EMD00551.1| hypothetical protein BAUCODRAFT_62360 [Baudoinia compniacensis UAMH
10762]
Length = 516
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+SP+L ++ R V+ +W Y R LQ+ KR ++CD+ LR +F D
Sbjct: 288 LSPQLAEILDTEEEDRAGAVQGIWEYCRAMGLQEDEEKRNVVCDEPLRKLFNRDSFQFPY 347
Query: 239 MNKLLAKHIIPLEPTK 254
+ + L +H+ PL P K
Sbjct: 348 VPEYLMQHLHPLPPIK 363
>gi|363744985|ref|XP_003643166.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1 isoform 1
[Gallus gallus]
Length = 471
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 170 PGGLNKVCGV-------------SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
PG +N C V P L ++G R I++ LW YI+ + LQDP +
Sbjct: 272 PGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHER 331
Query: 217 RKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEP 252
+ICD L+ +FE+ ++ + L ++P EP
Sbjct: 332 EYVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEP 367
>gi|346319613|gb|EGX89214.1| SWI-SNF complex subunit (BAF60b), putative [Cordyceps militaris
CM01]
Length = 504
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKM 239
S EL ++ A + E V LW Y+R+ +LQ+ KR CD+ L+ V +D + +
Sbjct: 289 STELADIIDMKAGTQQEAVMGLWEYVRQRSLQEDEEKRNFRCDELLKRVVRSDIGFIPML 348
Query: 240 NKLLAKHIIPLEP 252
N+ +A+++ PL P
Sbjct: 349 NEYVAQNLRPLLP 361
>gi|302899447|ref|XP_003048052.1| SWI/SNF complex protein [Nectria haematococca mpVI 77-13-4]
gi|256728984|gb|EEU42339.1| SWI/SNF complex protein [Nectria haematococca mpVI 77-13-4]
Length = 503
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDAL-RVVFETDCTDMF 237
+SPEL VV + E V LW YI+ LQ+ KR CD+ L ++V + D +
Sbjct: 285 LSPELAEVVDMKEATQQEAVMGLWEYIKLLGLQEDEEKRNFRCDEPLKKIVRQGDIGHIP 344
Query: 238 KMNKLLAKHIIPLEPTK 254
+N + +H+ PLEP +
Sbjct: 345 MLNDYVTQHLRPLEPIR 361
>gi|363744983|ref|XP_424488.3| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1 isoform 2
[Gallus gallus]
Length = 512
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 170 PGGLNKVCGV-------------SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
PG +N C V P L ++G R I++ LW YI+ + LQDP +
Sbjct: 272 PGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHER 331
Query: 217 RKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEP 252
+ICD L+ +FE+ ++ + L ++P EP
Sbjct: 332 EYVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEP 367
>gi|403336306|gb|EJY67343.1| Brg-1 associated factor, putative [Oxytricha trifallax]
Length = 665
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 36/74 (48%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+SP+L ++G R I+ LW YI+ N LQD N+ + C+ L +F D +
Sbjct: 350 LSPQLTKILGMEEETRLRIIGALWQYIKSNRLQDSDNRELVNCNAELLEIFGDDKVEFHN 409
Query: 239 MNKLLAKHIIPLEP 252
L H+ ++P
Sbjct: 410 AIFKLKDHLFEVQP 423
Score = 41.2 bits (95), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 10/71 (14%)
Query: 271 MESGPSSVIISEALAKFLGTGGREMLQAEATKRV----WEYIKVNHLEDPLNSMVILCDA 326
+E+ P +S L K LG ++ E R+ W+YIK N L+D N ++ C+A
Sbjct: 341 VENNPKKYRLSPQLTKILG------MEEETRLRIIGALWQYIKSNRLQDSDNRELVNCNA 394
Query: 327 KLRELLGCESI 337
+L E+ G + +
Sbjct: 395 ELLEIFGDDKV 405
>gi|359476848|ref|XP_002267100.2| PREDICTED: zinc finger CCCH domain-containing protein 44-like
[Vitis vinifera]
Length = 1643
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 6/82 (7%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQ------LWAYIRKNNLQDPSNKRKIICDDALRVVFETD 232
S EL +VG T ++ Q L YI++NNL+DP K +IICD LR +F
Sbjct: 339 ASKELLELVGHMKNGDTSVLSQFDVQALLLEYIKRNNLRDPRRKSQIICDMRLRNLFGKA 398
Query: 233 CTDMFKMNKLLAKHIIPLEPTK 254
F+M KLL H + E ++
Sbjct: 399 RVGHFEMLKLLESHFLIKEHSR 420
>gi|310800656|gb|EFQ35549.1| DEK C terminal domain-containing protein [Glomerella graminicola
M1.001]
Length = 257
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 165 KRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKR 217
KR+ G GG K +S L ++G+ + R ++VK+LW +I+ N+LQDP NKR
Sbjct: 203 KRKAG-GGFQKPFNLSEPLAELLGESQLSRPQVVKKLWEHIKGNDLQDPDNKR 254
>gi|19114022|ref|NP_593110.1| SWI/SNF and RSC complex subunit Ssr3 [Schizosaccharomyces pombe
972h-]
gi|74625425|sp|Q9P7S3.1|SSR3_SCHPO RecName: Full=SWI/SNF and RSC complexes subunit ssr3
gi|6912027|emb|CAB72235.1| SWI/SNF and RSC complex subunit Ssr3 [Schizosaccharomyces pombe]
Length = 425
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+S ++G R +IV LW YI+ + LQD KR I CD ALR +FE D +
Sbjct: 208 LSKAFANILGIREGTRPDIVSYLWQYIKFHRLQDMEEKRLINCDKALRDLFEADRLYFPR 267
Query: 239 MNKLLAKHIIPLEP 252
+ +L+ + + P++P
Sbjct: 268 IPELMNRFLEPIDP 281
Score = 41.2 bits (95), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 272 ESGPSSVIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLREL 331
E P +S+A A LG RE + + +W+YIK + L+D +I CD LR+L
Sbjct: 200 EEHPERYKLSKAFANILGI--REGTRPDIVSYLWQYIKFHRLQDMEEKRLINCDKALRDL 257
Query: 332 LGCESISALGIQEMLAR 348
+ + I E++ R
Sbjct: 258 FEADRLYFPRIPELMNR 274
>gi|406861599|gb|EKD14653.1| hypothetical protein MBM_07374 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 606
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 43/100 (43%), Gaps = 11/100 (11%)
Query: 166 RRGGPGGLNKVCGV-----------SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPS 214
+RGG N V + SP L V+ R E + LW YI LQ+
Sbjct: 258 KRGGDENTNVVINLTRDEHPERFQLSPLLAEVLDVKVATRDEALMGLWEYITAKGLQEED 317
Query: 215 NKRKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEPTK 254
KR CDD L+ + D + + LL +H+ PLEP K
Sbjct: 318 EKRSFECDDLLKQLTNRDKGYIPYLPDLLIQHMHPLEPIK 357
>gi|403346097|gb|EJY72433.1| Brg-1 associated factor, putative [Oxytricha trifallax]
Length = 664
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 36/74 (48%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+SP+L ++G R I+ LW YI+ N LQD N+ + C+ L +F D +
Sbjct: 349 LSPQLTKILGMEEETRLRIIGALWQYIKSNRLQDSDNRELVNCNAELLEIFGDDKVEFHN 408
Query: 239 MNKLLAKHIIPLEP 252
L H+ ++P
Sbjct: 409 AIFKLKDHLFEVQP 422
Score = 41.2 bits (95), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 271 MESGPSSVIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRE 330
+E+ P +S L K LG E + +W+YIK N L+D N ++ C+A+L E
Sbjct: 340 VENNPKKYRLSPQLTKILGM--EEETRLRIIGALWQYIKSNRLQDSDNRELVNCNAELLE 397
Query: 331 LLGCESI 337
+ G + +
Sbjct: 398 IFGDDKV 404
>gi|395834878|ref|XP_003790414.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1 isoform 2
[Otolemur garnettii]
Length = 545
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 170 PGGLNKVCGV-------------SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
PG +N C V P L ++G R I++ LW YI+ + LQDP +
Sbjct: 346 PGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHER 405
Query: 217 RKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEP 252
+ICD L+ +FE+ ++ + L ++P EP
Sbjct: 406 EFVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEP 441
>gi|242058661|ref|XP_002458476.1| hypothetical protein SORBIDRAFT_03g034370 [Sorghum bicolor]
gi|241930451|gb|EES03596.1| hypothetical protein SORBIDRAFT_03g034370 [Sorghum bicolor]
Length = 1681
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 204 YIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKH-----IIPLEPTKESSK 258
YI++NNL+DP K +IICD L+ +F + F+M KLL H + P++ +
Sbjct: 636 YIKRNNLRDPRRKSQIICDSLLQSLFAKERVGHFEMLKLLESHFPTSEVSPIDADENHGG 695
Query: 259 RFKPDAESTTEGMESGPSSVIIS 281
PD +G + +SV++S
Sbjct: 696 VVDPDPSQDADG--NSEASVVMS 716
>gi|395834876|ref|XP_003790413.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1 isoform 1
[Otolemur garnettii]
Length = 586
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 170 PGGLNKVCGV-------------SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
PG +N C V P L ++G R I++ LW YI+ + LQDP +
Sbjct: 346 PGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHER 405
Query: 217 RKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEP 252
+ICD L+ +FE+ ++ + L ++P EP
Sbjct: 406 EFVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEP 441
>gi|395537910|ref|XP_003770931.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1 [Sarcophilus
harrisii]
Length = 517
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 170 PGGLNKVCGV-------------SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
PG +N C V P L ++G R I++ LW YI+ + LQDP +
Sbjct: 277 PGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHER 336
Query: 217 RKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEP 252
+ICD L+ +FE+ ++ + L ++P EP
Sbjct: 337 EFVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEP 372
>gi|378727063|gb|EHY53522.1| 26S proteasome regulatory subunit N6 [Exophiala dermatitidis
NIH/UT8656]
Length = 487
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 42/76 (55%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+SP L ++ R E+V +W Y++ LQ+ +R I CDD LR +F T+ +
Sbjct: 268 LSPVLVDMLDMTEADRAEVVMAIWDYVKLFGLQEEDERRTIRCDDNLRQLFGTETISFPQ 327
Query: 239 MNKLLAKHIIPLEPTK 254
+ + + +++PL+P +
Sbjct: 328 IPERILPYLLPLDPVR 343
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 272 ESGPSSVIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLREL 331
+ P +S L L E +AE +W+Y+K+ L++ I CD LR+L
Sbjct: 260 DETPERFKLSPVLVDMLDMT--EADRAEVVMAIWDYVKLFGLQEEDERRTIRCDDNLRQL 317
Query: 332 LGCESIS 338
G E+IS
Sbjct: 318 FGTETIS 324
>gi|84370151|ref|NP_001033648.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 1 [Bos taurus]
gi|122137061|sp|Q2TBN1.1|SMRD1_BOVIN RecName: Full=SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1; AltName:
Full=60 kDa BRG-1/Brm-associated factor subunit A;
AltName: Full=BRG1-associated factor 60A; Short=BAF60A;
AltName: Full=SWI/SNF complex 60 kDa subunit
gi|83638693|gb|AAI09891.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 1 [Bos taurus]
Length = 515
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 62/145 (42%), Gaps = 24/145 (16%)
Query: 170 PGGLNKVCGV-------------SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
PG +N C V P L ++G R I++ LW YI+ + LQDP +
Sbjct: 275 PGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHER 334
Query: 217 RKIICDDALRVVFETDCTDMFKMNK-----------LLAKHIIPLEPTKESSKRFKPDAE 265
+ICD L+ +FE+ ++ + ++ H+I ++P + E
Sbjct: 335 EFVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEPIIINHVISVDPNDQKKTACYDIDE 394
Query: 266 STTEGMESGPSSVIISEALAKFLGT 290
+ +++ +S ++S A + + T
Sbjct: 395 EVDDTLKTQMNSFLLSTASQQEIAT 419
>gi|297262334|ref|XP_001111166.2| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1-like isoform
6 [Macaca mulatta]
Length = 598
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 170 PGGLNKVCGV-------------SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
PG +N C V P L ++G R I++ LW YI+ + LQDP +
Sbjct: 358 PGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHER 417
Query: 217 RKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEP 252
+ICD L+ +FE+ ++ + L ++P EP
Sbjct: 418 EFVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEP 453
>gi|297691802|ref|XP_002823255.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1 isoform 2
[Pongo abelii]
Length = 603
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 170 PGGLNKVCGV-------------SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
PG +N C V P L ++G R I++ LW YI+ + LQDP +
Sbjct: 404 PGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHER 463
Query: 217 RKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEP 252
+ICD L+ +FE+ ++ + L ++P EP
Sbjct: 464 EFVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEP 499
>gi|301774016|ref|XP_002922413.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1-like
[Ailuropoda melanoleuca]
Length = 551
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 170 PGGLNKVCGV-------------SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
PG +N C V P L ++G R I++ LW YI+ + LQDP +
Sbjct: 311 PGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHER 370
Query: 217 RKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEP 252
+ICD L+ +FE+ ++ + L ++P EP
Sbjct: 371 EFVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEP 406
>gi|119578527|gb|EAW58123.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 1, isoform CRA_d [Homo
sapiens]
Length = 598
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 170 PGGLNKVCGV-------------SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
PG +N C V P L ++G R I++ LW YI+ + LQDP +
Sbjct: 358 PGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHER 417
Query: 217 RKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEP 252
+ICD L+ +FE+ ++ + L ++P EP
Sbjct: 418 EFVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEP 453
>gi|367034596|ref|XP_003666580.1| hypothetical protein MYCTH_56853 [Myceliophthora thermophila ATCC
42464]
gi|347013853|gb|AEO61335.1| hypothetical protein MYCTH_56853 [Myceliophthora thermophila ATCC
42464]
Length = 489
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 37/76 (48%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
++P L +V R E V LW YI+ NLQ+ KR CDD L+ + + +
Sbjct: 269 LAPALAEIVDMREATRQEAVMALWEYIKLMNLQEDEEKRNFRCDDLLKKIIPRETGYIPH 328
Query: 239 MNKLLAKHIIPLEPTK 254
+N + H+ PL P K
Sbjct: 329 LNDYITPHLRPLPPVK 344
>gi|417411114|gb|JAA52007.1| Putative swi/snf transcription activation complex subunit, partial
[Desmodus rotundus]
Length = 486
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 170 PGGLNKVCGV-------------SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
PG +N C V P L ++G R I++ LW YI+ + LQDP +
Sbjct: 246 PGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHER 305
Query: 217 RKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEP 252
+ICD L+ +FE+ ++ + L ++P EP
Sbjct: 306 EFVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEP 341
>gi|345792106|ref|XP_543674.3| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1 [Canis lupus
familiaris]
Length = 476
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 170 PGGLNKVCGV-------------SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
PG +N C V P L ++G R I++ LW YI+ + LQDP +
Sbjct: 236 PGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHER 295
Query: 217 RKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEP 252
+ICD L+ +FE+ ++ + L ++P EP
Sbjct: 296 EFVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEP 331
>gi|297691800|ref|XP_002823254.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1 isoform 1
[Pongo abelii]
Length = 644
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 170 PGGLNKVCGV-------------SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
PG +N C V P L ++G R I++ LW YI+ + LQDP +
Sbjct: 404 PGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHER 463
Query: 217 RKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEP 252
+ICD L+ +FE+ ++ + L ++P EP
Sbjct: 464 EFVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEP 499
>gi|119578529|gb|EAW58125.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 1, isoform CRA_e [Homo
sapiens]
gi|119578530|gb|EAW58126.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 1, isoform CRA_e [Homo
sapiens]
gi|119578531|gb|EAW58127.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 1, isoform CRA_e [Homo
sapiens]
Length = 639
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 170 PGGLNKVCGV-------------SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
PG +N C V P L ++G R I++ LW YI+ + LQDP +
Sbjct: 399 PGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHER 458
Query: 217 RKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEP 252
+ICD L+ +FE+ ++ + L ++P EP
Sbjct: 459 EFVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEP 494
>gi|119578526|gb|EAW58122.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 1, isoform CRA_c [Homo
sapiens]
gi|119578528|gb|EAW58124.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 1, isoform CRA_c [Homo
sapiens]
Length = 598
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 170 PGGLNKVCGV-------------SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
PG +N C V P L ++G R I++ LW YI+ + LQDP +
Sbjct: 399 PGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHER 458
Query: 217 RKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEP 252
+ICD L+ +FE+ ++ + L ++P EP
Sbjct: 459 EFVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEP 494
>gi|133777007|gb|AAH09368.3| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 1 [Homo sapiens]
gi|351697596|gb|EHB00515.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 1 [Heterocephalus glaber]
Length = 476
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 170 PGGLNKVCGV-------------SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
PG +N C V P L ++G R I++ LW YI+ + LQDP +
Sbjct: 236 PGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHER 295
Query: 217 RKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEP 252
+ICD L+ +FE+ ++ + L ++P EP
Sbjct: 296 EFVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEP 331
>gi|344267934|ref|XP_003405819.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1 isoform 2
[Loxodonta africana]
Length = 474
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 170 PGGLNKVCGV-------------SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
PG +N C V P L ++G R I++ LW YI+ + LQDP +
Sbjct: 275 PGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHER 334
Query: 217 RKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEP 252
+ICD L+ +FE+ ++ + L ++P EP
Sbjct: 335 EFVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEP 370
>gi|297262336|ref|XP_001111207.2| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1-like isoform
7 [Macaca mulatta]
Length = 598
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 170 PGGLNKVCGV-------------SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
PG +N C V P L ++G R I++ LW YI+ + LQDP +
Sbjct: 399 PGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHER 458
Query: 217 RKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEP 252
+ICD L+ +FE+ ++ + L ++P EP
Sbjct: 459 EFVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEP 494
>gi|224099053|ref|XP_002193185.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1 isoform 1
[Taeniopygia guttata]
Length = 476
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 170 PGGLNKVCGV-------------SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
PG +N C V P L ++G R I++ LW YI+ + LQDP +
Sbjct: 236 PGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHER 295
Query: 217 RKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEP 252
+ICD L+ +FE+ ++ + L ++P EP
Sbjct: 296 EFVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEP 331
>gi|133908631|ref|NP_620710.2| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 1 isoform b [Homo sapiens]
gi|296211628|ref|XP_002752492.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1 isoform 2
[Callithrix jacchus]
gi|395744255|ref|XP_003778072.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1 [Pongo
abelii]
gi|402885954|ref|XP_003906408.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1 isoform 2
[Papio anubis]
gi|410964374|ref|XP_003988730.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1 isoform 2
[Felis catus]
gi|380815818|gb|AFE79783.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 1 isoform b [Macaca
mulatta]
gi|383420969|gb|AFH33698.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 1 isoform b [Macaca
mulatta]
gi|384948940|gb|AFI38075.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 1 isoform b [Macaca
mulatta]
Length = 474
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 170 PGGLNKVCGV-------------SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
PG +N C V P L ++G R I++ LW YI+ + LQDP +
Sbjct: 275 PGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHER 334
Query: 217 RKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEP 252
+ICD L+ +FE+ ++ + L ++P EP
Sbjct: 335 EFVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEP 370
>gi|431901344|gb|ELK08370.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 1 [Pteropus alecto]
Length = 515
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 170 PGGLNKVCGV-------------SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
PG +N C V P L ++G R I++ LW YI+ + LQDP +
Sbjct: 275 PGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHER 334
Query: 217 RKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEP 252
+ICD L+ +FE+ ++ + L ++P EP
Sbjct: 335 EFVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEP 370
>gi|332206268|ref|XP_003252213.1| PREDICTED: LOW QUALITY PROTEIN: SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily D
member 1 [Nomascus leucogenys]
Length = 515
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 170 PGGLNKVCGV-------------SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
PG +N C V P L ++G R I++ LW YI+ + LQDP +
Sbjct: 275 PGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHER 334
Query: 217 RKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEP 252
+ICD L+ +FE+ ++ + L ++P EP
Sbjct: 335 EFVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEP 370
>gi|332839411|ref|XP_509054.3| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1 isoform 7
[Pan troglodytes]
gi|397511072|ref|XP_003825905.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1 isoform 1
[Pan paniscus]
Length = 639
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 170 PGGLNKVCGV-------------SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
PG +N C V P L ++G R I++ LW YI+ + LQDP +
Sbjct: 399 PGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHER 458
Query: 217 RKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEP 252
+ICD L+ +FE+ ++ + L ++P EP
Sbjct: 459 EFVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEP 494
>gi|114644835|ref|XP_001155773.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1 isoform 5
[Pan troglodytes]
gi|397511074|ref|XP_003825906.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1 isoform 2
[Pan paniscus]
Length = 598
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 170 PGGLNKVCGV-------------SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
PG +N C V P L ++G R I++ LW YI+ + LQDP +
Sbjct: 399 PGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHER 458
Query: 217 RKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEP 252
+ICD L+ +FE+ ++ + L ++P EP
Sbjct: 459 EFVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEP 494
>gi|297262332|ref|XP_001111275.2| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1-like isoform
9 [Macaca mulatta]
Length = 639
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 170 PGGLNKVCGV-------------SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
PG +N C V P L ++G R I++ LW YI+ + LQDP +
Sbjct: 399 PGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHER 458
Query: 217 RKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEP 252
+ICD L+ +FE+ ++ + L ++P EP
Sbjct: 459 EFVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEP 494
>gi|444515362|gb|ELV10861.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 1 [Tupaia chinensis]
Length = 424
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 170 PGGLNKVCGV-------------SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
PG +N C V P L ++G R I++ LW YI+ + LQDP +
Sbjct: 184 PGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHER 243
Query: 217 RKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEP 252
+ICD L+ +FE+ ++ + L ++P EP
Sbjct: 244 EFVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEP 279
>gi|157824218|ref|NP_001102222.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 1 [Rattus norvegicus]
gi|149032060|gb|EDL86972.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 1 (predicted) [Rattus
norvegicus]
Length = 515
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 170 PGGLNKVCGV-------------SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
PG +N C V P L ++G R I++ LW YI+ + LQDP +
Sbjct: 275 PGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHER 334
Query: 217 RKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEP 252
+ICD L+ +FE+ ++ + L ++P EP
Sbjct: 335 EFVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEP 370
>gi|133908629|ref|NP_003067.3| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 1 isoform a [Homo sapiens]
gi|347543729|ref|NP_001231542.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 1 [Sus scrofa]
gi|296211626|ref|XP_002752491.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1 isoform 1
[Callithrix jacchus]
gi|402885952|ref|XP_003906407.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1 isoform 1
[Papio anubis]
gi|410964372|ref|XP_003988729.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1 isoform 1
[Felis catus]
gi|238054318|sp|Q96GM5.2|SMRD1_HUMAN RecName: Full=SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1; AltName:
Full=60 kDa BRG-1/Brm-associated factor subunit A;
AltName: Full=BRG1-associated factor 60A; Short=BAF60A;
AltName: Full=SWI/SNF complex 60 kDa subunit
gi|167774207|gb|ABZ92538.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 1 [synthetic construct]
gi|261859058|dbj|BAI46051.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 1 [synthetic construct]
gi|380815816|gb|AFE79782.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 1 isoform a [Macaca
mulatta]
gi|383420967|gb|AFH33697.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 1 isoform a [Macaca
mulatta]
gi|384948938|gb|AFI38074.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 1 isoform a [Macaca
mulatta]
gi|410217372|gb|JAA05905.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 1 [Pan troglodytes]
gi|410253570|gb|JAA14752.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 1 [Pan troglodytes]
gi|410300590|gb|JAA28895.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 1 [Pan troglodytes]
gi|410353925|gb|JAA43566.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 1 [Pan troglodytes]
Length = 515
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 170 PGGLNKVCGV-------------SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
PG +N C V P L ++G R I++ LW YI+ + LQDP +
Sbjct: 275 PGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHER 334
Query: 217 RKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEP 252
+ICD L+ +FE+ ++ + L ++P EP
Sbjct: 335 EFVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEP 370
>gi|348580137|ref|XP_003475835.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1-like [Cavia
porcellus]
Length = 515
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 170 PGGLNKVCGV-------------SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
PG +N C V P L ++G R I++ LW YI+ + LQDP +
Sbjct: 275 PGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHER 334
Query: 217 RKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEP 252
+ICD L+ +FE+ ++ + L ++P EP
Sbjct: 335 EFVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEP 370
>gi|344267932|ref|XP_003405818.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1 isoform 1
[Loxodonta africana]
Length = 515
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 170 PGGLNKVCGV-------------SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
PG +N C V P L ++G R I++ LW YI+ + LQDP +
Sbjct: 275 PGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHER 334
Query: 217 RKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEP 252
+ICD L+ +FE+ ++ + L ++P EP
Sbjct: 335 EFVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEP 370
>gi|338726079|ref|XP_001915940.2| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1 [Equus
caballus]
Length = 468
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 170 PGGLNKVCGV-------------SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
PG +N C V P L ++G R I++ LW YI+ + LQDP +
Sbjct: 228 PGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHER 287
Query: 217 RKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEP 252
+ICD L+ +FE+ ++ + L ++P EP
Sbjct: 288 EFVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEP 323
>gi|296487808|tpg|DAA29921.1| TPA: SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 1 [Bos taurus]
Length = 515
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 170 PGGLNKVCGV-------------SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
PG +N C V P L ++G R I++ LW YI+ + LQDP +
Sbjct: 275 PGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHER 334
Query: 217 RKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEP 252
+ICD L+ +FE+ ++ + L ++P EP
Sbjct: 335 EFVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEP 370
>gi|119578524|gb|EAW58120.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 1, isoform CRA_a [Homo
sapiens]
Length = 639
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 170 PGGLNKVCGV-------------SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
PG +N C V P L ++G R I++ LW YI+ + LQDP +
Sbjct: 399 PGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHER 458
Query: 217 RKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEP 252
+ICD L+ +FE+ ++ + L ++P EP
Sbjct: 459 EFVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEP 494
>gi|355720717|gb|AES07024.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 1 [Mustela putorius furo]
Length = 470
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 170 PGGLNKVCGV-------------SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
PG +N C V P L ++G R I++ LW YI+ + LQDP +
Sbjct: 230 PGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHER 289
Query: 217 RKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEP 252
+ICD L+ +FE+ ++ + L ++P EP
Sbjct: 290 EFVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEP 325
>gi|403296627|ref|XP_003939202.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1 isoform 2
[Saimiri boliviensis boliviensis]
Length = 412
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 170 PGGLNKVCGV-------------SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
PG +N C V P L ++G R I++ LW YI+ + LQDP +
Sbjct: 172 PGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHER 231
Query: 217 RKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEP 252
+ICD L+ +FE+ ++ + L ++P EP
Sbjct: 232 EFVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEP 267
>gi|403296629|ref|XP_003939203.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1 isoform 3
[Saimiri boliviensis boliviensis]
Length = 412
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 170 PGGLNKVCGV-------------SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
PG +N C V P L ++G R I++ LW YI+ + LQDP +
Sbjct: 213 PGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHER 272
Query: 217 RKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEP 252
+ICD L+ +FE+ ++ + L ++P EP
Sbjct: 273 EFVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEP 308
>gi|281348557|gb|EFB24141.1| hypothetical protein PANDA_011399 [Ailuropoda melanoleuca]
gi|355564219|gb|EHH20719.1| SWI/SNF complex 60 kDa subunit, partial [Macaca mulatta]
gi|355786087|gb|EHH66270.1| SWI/SNF complex 60 kDa subunit, partial [Macaca fascicularis]
Length = 456
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 170 PGGLNKVCGV-------------SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
PG +N C V P L ++G R I++ LW YI+ + LQDP +
Sbjct: 216 PGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHER 275
Query: 217 RKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEP 252
+ICD L+ +FE+ ++ + L ++P EP
Sbjct: 276 EFVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEP 311
>gi|354491482|ref|XP_003507884.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1-like
[Cricetulus griseus]
Length = 495
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 170 PGGLNKVCGV-------------SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
PG +N C V P L ++G R I++ LW YI+ + LQDP +
Sbjct: 255 PGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHER 314
Query: 217 RKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEP 252
+ICD L+ +FE+ ++ + L ++P EP
Sbjct: 315 EFVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEP 350
>gi|449531627|ref|XP_004172787.1| PREDICTED: upstream activation factor subunit spp27-like [Cucumis
sativus]
Length = 100
Score = 47.8 bits (112), Expect = 0.009, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 183 LQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF 229
L+ VG + R K +W+YI+ NNLQDP+NK +ICD+ L+ +
Sbjct: 30 LREFVGHSQISRLGCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSIL 76
Score = 43.1 bits (100), Expect = 0.20, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 31/54 (57%)
Query: 302 KRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNHFLRQS 355
K VW YIK N+L+DP N V++CD KL+ +L + L L + HF + S
Sbjct: 46 KCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNS 99
>gi|168001062|ref|XP_001753234.1| SWI/SNF transcription activation complex subunit [Physcomitrella
patens subsp. patens]
gi|162695520|gb|EDQ81863.1| SWI/SNF transcription activation complex subunit [Physcomitrella
patens subsp. patens]
Length = 421
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+SP L V+G R ++ +W YI+ LQ+P + I CDDAL+ VF+ +
Sbjct: 207 LSPALAQVLGVEVDTRPHVIAAVWQYIKTKKLQNPVDPTMINCDDALQKVFDDEKIKFAS 266
Query: 239 MNKLLAKHIIPLEPTK 254
++ L +H+ P +P +
Sbjct: 267 ISARLHQHMNPPQPIQ 282
Score = 38.9 bits (89), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 271 MESGPSSVIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRE 330
M+ P +S ALA+ LG A VW+YIK L++P++ +I CD L++
Sbjct: 198 MDHTPERFKLSPALAQVLGVEVDTRPHVIAA--VWQYIKTKKLQNPVDPTMINCDDALQK 255
Query: 331 LLGCESISALGIQEML 346
+ E I I L
Sbjct: 256 VFDDEKIKFASISARL 271
>gi|403296625|ref|XP_003939201.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1 isoform 1
[Saimiri boliviensis boliviensis]
Length = 453
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 170 PGGLNKVCGV-------------SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
PG +N C V P L ++G R I++ LW YI+ + LQDP +
Sbjct: 213 PGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHER 272
Query: 217 RKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEP 252
+ICD L+ +FE+ ++ + L ++P EP
Sbjct: 273 EFVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEP 308
>gi|327264469|ref|XP_003217036.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1-like [Anolis
carolinensis]
Length = 458
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 170 PGGLNKVCGV-------------SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
PG +N C V P L ++G R I++ LW YI+ + LQDP +
Sbjct: 218 PGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHER 277
Query: 217 RKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEP 252
+ICD L+ +FE+ ++ + L ++P EP
Sbjct: 278 EYVICDKYLQQIFESPRMKFSEIPQRLHALLMPPEP 313
>gi|326936487|ref|XP_003214285.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1-like
[Meleagris gallopavo]
Length = 400
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 13/75 (17%)
Query: 170 PGGLNKVCGV-------------SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
PG +N C V P L ++G R I++ LW YI+ + LQDP +
Sbjct: 160 PGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHER 219
Query: 217 RKIICDDALRVVFET 231
+ICD L+ +FE+
Sbjct: 220 EYVICDKYLQQIFES 234
>gi|440909091|gb|ELR59038.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 1, partial [Bos grunniens
mutus]
Length = 456
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 170 PGGLNKVCGV-------------SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
PG +N C V P L ++G R I++ LW YI+ + LQDP +
Sbjct: 216 PGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHER 275
Query: 217 RKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEP 252
+ICD L+ +FE+ ++ + L ++P EP
Sbjct: 276 EFVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEP 311
>gi|432114468|gb|ELK36316.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 1 [Myotis davidii]
Length = 453
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 170 PGGLNKVCGV-------------SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
PG +N C V P L ++G R I++ LW YI+ + LQDP +
Sbjct: 213 PGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHER 272
Query: 217 RKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEP 252
+ICD L+ +FE+ ++ + L ++P EP
Sbjct: 273 EFVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEP 308
>gi|4566530|gb|AAD23390.1|AF109733_1 SWI/SNF-related, matrix-associated, actin-dependent regulator of
chromatin D1 [Homo sapiens]
gi|344237500|gb|EGV93603.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 1 [Cricetulus griseus]
Length = 453
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 170 PGGLNKVCGV-------------SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
PG +N C V P L ++G R I++ LW YI+ + LQDP +
Sbjct: 213 PGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHER 272
Query: 217 RKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEP 252
+ICD L+ +FE+ ++ + L ++P EP
Sbjct: 273 EFVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEP 308
>gi|426224514|ref|XP_004006415.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1 [Ovis aries]
Length = 453
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 170 PGGLNKVCGV-------------SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
PG +N C V P L ++G R I++ LW YI+ + LQDP +
Sbjct: 213 PGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHER 272
Query: 217 RKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEP 252
+ICD L+ +FE+ ++ + L ++P EP
Sbjct: 273 EFVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEP 308
>gi|413957175|gb|AFW89824.1| hypothetical protein ZEAMMB73_838328 [Zea mays]
Length = 2233
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 179 VSPELQAVVG------QPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETD 232
SPEL VG Q + + ++ L YI+KNNL+DP K +IICD L +F
Sbjct: 352 ASPELLEFVGHMRDGDQSFISQFDVQTLLLDYIKKNNLRDPQRKSQIICDLRLHRLFRKA 411
Query: 233 CTDMFKMNKLLAKHIIPLEPTKESSKR 259
F+M KLL H + E + + R
Sbjct: 412 RVAHFEMLKLLEMHFLMNETSTVTDSR 438
>gi|408399384|gb|EKJ78487.1| hypothetical protein FPSE_01296 [Fusarium pseudograminearum CS3096]
Length = 499
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDAL-RVVFETDCTDMF 237
+SPEL VV E V LW YI+ LQ+ KR C++ L +V+ + D +
Sbjct: 281 LSPELADVVDMKDATHQEAVMGLWEYIKLLGLQEDEEKRNFRCNEPLKKVIRQGDIGHIP 340
Query: 238 KMNKLLAKHIIPLEPTK 254
+N + +H+ PLEPT+
Sbjct: 341 LLNDYVQQHLRPLEPTR 357
>gi|46138419|ref|XP_390900.1| hypothetical protein FG10724.1 [Gibberella zeae PH-1]
Length = 499
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDAL-RVVFETDCTDMF 237
+SPEL VV E V LW YI+ LQ+ KR C++ L +V+ + D +
Sbjct: 281 LSPELADVVDMKDATHQEAVMGLWEYIKLLGLQEDEEKRNFRCNEPLKKVIRQGDIGHIP 340
Query: 238 KMNKLLAKHIIPLEPTK 254
+N + +H+ PLEPT+
Sbjct: 341 LLNDYVQQHLRPLEPTR 357
>gi|158258837|dbj|BAF85389.1| unnamed protein product [Homo sapiens]
Length = 292
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 170 PGGLNKVCGV-------------SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
PG +N C V P L ++G R I++ LW YI+ + LQDP +
Sbjct: 52 PGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHER 111
Query: 217 RKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEP 252
+ICD L+ +FE+ ++ + L ++P EP
Sbjct: 112 EFVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEP 147
>gi|70991062|ref|XP_750380.1| SWI-SNF complex subunit (BAF60b) [Aspergillus fumigatus Af293]
gi|66848012|gb|EAL88342.1| SWI-SNF complex subunit (BAF60b), putative [Aspergillus fumigatus
Af293]
Length = 508
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+S EL V+ R+ IV +W YIR LQ+ KR + CD LR +F D +
Sbjct: 286 LSKELAEVLDVEEETRSGIVLGIWDYIRAMGLQEDEEKRLVRCDHRLRAIFGRDQMFFPQ 345
Query: 239 MNKLLAKHIIPLEPTK 254
+ + + H PL+P K
Sbjct: 346 IPESIGPHTSPLDPIK 361
>gi|159130854|gb|EDP55967.1| SWI-SNF complex subunit (BAF60b), putative [Aspergillus fumigatus
A1163]
Length = 508
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+S EL V+ R+ IV +W YIR LQ+ KR + CD LR +F D +
Sbjct: 286 LSKELAEVLDVEEETRSGIVLGIWDYIRAMGLQEDEEKRLVRCDHRLRAIFGRDQMFFPQ 345
Query: 239 MNKLLAKHIIPLEPTK 254
+ + + H PL+P K
Sbjct: 346 IPESIGPHTSPLDPIK 361
>gi|1549249|gb|AAC52794.1| SWI/SNF complex 60 KDa subunit [Mus musculus]
Length = 475
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 170 PGGLNKVCGV-------------SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
PG +N C V P L ++G R I++ LW YI+ + LQDP +
Sbjct: 236 PGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHER 295
Query: 217 RKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEP 252
++CD L+ +FE+ ++ + L ++P EP
Sbjct: 296 EFVLCDKYLQQIFESQRMKFSEIPQRLHALLMPPEP 331
>gi|388505468|gb|AFK40800.1| unknown [Medicago truncatula]
Length = 100
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 183 LQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF 229
L+ VGQ R ++W+YI+ NNLQDP+NK + CD+ L+ +
Sbjct: 30 LRDFVGQSQTSRLSCFMRVWSYIKTNNLQDPNNKNVVNCDEKLKGIL 76
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 22/30 (73%)
Query: 303 RVWEYIKVNHLEDPLNSMVILCDAKLRELL 332
RVW YIK N+L+DP N V+ CD KL+ +L
Sbjct: 47 RVWSYIKTNNLQDPNNKNVVNCDEKLKGIL 76
>gi|133777022|gb|AAH26783.3| Smarcd1 protein [Mus musculus]
gi|148672169|gb|EDL04116.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 1 [Mus musculus]
Length = 476
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 170 PGGLNKVCGV-------------SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
PG +N C V P L ++G R I++ LW YI+ + LQDP +
Sbjct: 236 PGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHER 295
Query: 217 RKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEP 252
++CD L+ +FE+ ++ + L ++P EP
Sbjct: 296 EFVLCDKYLQQIFESQRMKFSEIPQRLHALLMPPEP 331
>gi|380494201|emb|CCF33332.1| SWIB/MDM2 domain-containing protein [Colletotrichum higginsianum]
Length = 397
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDAL-RVVFETDCTDMF 237
+SPEL +V P R E V +W YI+ LQ+ KR CD+ L ++V +D +
Sbjct: 174 LSPELADIVDMPQASRQEAVLAVWEYIKMMGLQEDEEKRNFRCDELLKKIVNGSDVGIIP 233
Query: 238 KMNKLLAKHIIPLEP 252
+N + H+ PL P
Sbjct: 234 NLNDYIQPHLRPLPP 248
>gi|133777113|gb|AAH79839.2| Smarcd1 protein [Mus musculus]
Length = 476
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 170 PGGLNKVCGV-------------SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
PG +N C V P L ++G R I++ LW YI+ + LQDP +
Sbjct: 236 PGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHER 295
Query: 217 RKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEP 252
++CD L+ +FE+ ++ + L ++P EP
Sbjct: 296 EFVLCDKYLQQIFESQRMKFSEIPQRLHALLMPPEP 331
>gi|125347396|ref|NP_114030.2| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 1 [Mus musculus]
gi|238054366|sp|Q61466.3|SMRD1_MOUSE RecName: Full=SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1; AltName:
Full=60 kDa BRG-1/Brm-associated factor subunit A;
AltName: Full=BRG1-associated factor 60A; Short=BAF60A;
AltName: Full=Protein D15KZ1; AltName: Full=SWI/SNF
complex 60 kDa subunit
Length = 515
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 170 PGGLNKVCGV-------------SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
PG +N C V P L ++G R I++ LW YI+ + LQDP +
Sbjct: 275 PGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHER 334
Query: 217 RKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEP 252
++CD L+ +FE+ ++ + L ++P EP
Sbjct: 335 EFVLCDKYLQQIFESQRMKFSEIPQRLHALLMPPEP 370
>gi|576884|gb|AAA53377.1| D15Kzl, partial [Mus musculus]
Length = 461
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 170 PGGLNKVCGV-------------SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
PG +N C V P L ++G R I++ LW YI+ + LQDP +
Sbjct: 272 PGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHER 331
Query: 217 RKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEP 252
++CD L+ +FE+ ++ + L ++P EP
Sbjct: 332 EFVLCDKYLQQIFESQRMKFSEIPQRLHALLMPPEP 367
>gi|119496525|ref|XP_001265036.1| SWI-SNF complex subunit (BAF60b), putative [Neosartorya fischeri
NRRL 181]
gi|119413198|gb|EAW23139.1| SWI-SNF complex subunit (BAF60b), putative [Neosartorya fischeri
NRRL 181]
Length = 510
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+S EL V+ R+ IV +W YIR LQ+ KR + CD LR +F D +
Sbjct: 288 LSKELAEVLDVEEETRSGIVLGIWDYIRAMGLQEDEEKRLVRCDHRLRAIFGRDQMFFPQ 347
Query: 239 MNKLLAKHIIPLEPTK 254
+ + + H PL+P K
Sbjct: 348 IPESIGPHTSPLDPIK 363
>gi|301105769|ref|XP_002901968.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262099306|gb|EEY57358.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 375
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 41/69 (59%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+SP L ++G+ + R +K+ WAY++K+ LQDP + R I + + VF+ + +
Sbjct: 302 LSPALSNMLGKSELTRPAAIKEFWAYVKKHELQDPKDGRMIHPNAEMMNVFKVEEIKFTQ 361
Query: 239 MNKLLAKHI 247
+ L++KH+
Sbjct: 362 VMGLVSKHL 370
>gi|168040973|ref|XP_001772967.1| SWI/SNF transcription activation complex subunit [Physcomitrella
patens subsp. patens]
gi|162675700|gb|EDQ62192.1| SWI/SNF transcription activation complex subunit [Physcomitrella
patens subsp. patens]
Length = 404
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 38/74 (51%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+SP L V+G RT I +W YI+ LQ+ + I CD ALR +F +
Sbjct: 190 LSPALAQVLGVEVDSRTHICAAVWQYIKIKKLQNHVDPTMIDCDAALRRIFGDERIKFAS 249
Query: 239 MNKLLAKHIIPLEP 252
++ L +H+ PL+P
Sbjct: 250 ISARLHQHLSPLQP 263
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 271 MESGPSSVIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRE 330
M+ P +S ALA+ LG A VW+YIK+ L++ ++ +I CDA LR
Sbjct: 181 MDHSPERFKLSPALAQVLGVEVDSRTHICAA--VWQYIKIKKLQNHVDPTMIDCDAALRR 238
Query: 331 LLGCESISALGIQEML 346
+ G E I I L
Sbjct: 239 IFGDERIKFASISARL 254
>gi|336468986|gb|EGO57149.1| hypothetical protein NEUTE1DRAFT_147586 [Neurospora tetrasperma
FGSC 2508]
Length = 571
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+SPEL V+ R E V L+ YI+ LQ+ KR CDD L+ + + + +
Sbjct: 342 LSPELSDVIDMTEATRQEAVAGLFEYIKLMKLQEDDEKRNFRCDDLLQKLIGRESGHIPQ 401
Query: 239 MNKLLAKHIIPLEPTK 254
+N+ + H+ PL P K
Sbjct: 402 LNEYVTPHLRPLPPIK 417
>gi|213402469|ref|XP_002172007.1| SWI/SNF and RSC complex subunit Ssr3 [Schizosaccharomyces japonicus
yFS275]
gi|212000054|gb|EEB05714.1| SWI/SNF and RSC complex subunit Ssr3 [Schizosaccharomyces japonicus
yFS275]
Length = 409
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+S ++G R IV LW YI+ + LQD +KR I CD L+ VF TD K
Sbjct: 191 LSANFAQLLGISEGTRPTIVMALWQYIKFHRLQDMEDKRLINCDKGLQDVFGTDRLYFPK 250
Query: 239 MNKLLAKHIIPLEP 252
+ +L+ K + P++P
Sbjct: 251 IPELMNKFLQPVDP 264
>gi|356570147|ref|XP_003553252.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Glycine max]
Length = 478
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+SP L+ V+G R IV +W Y++ LQ P++ CD AL+ VF D
Sbjct: 265 LSPALREVLGVQVDTRARIVSAIWHYVKARKLQIPNDPSFFHCDQALQRVFGEDKVKFTM 324
Query: 239 MNKLLAKHIIP 249
+++ +++H+ P
Sbjct: 325 VSQKISQHLFP 335
>gi|297836700|ref|XP_002886232.1| SWIB complex BAF60b domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332072|gb|EFH62491.1| SWIB complex BAF60b domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 383
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%)
Query: 192 MPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLE 251
+P TE+ L AYI++ NL+DP K ++ICD L+ +F F+M LL H + E
Sbjct: 165 LPMTEVQTLLLAYIKRYNLRDPRRKSQVICDSRLQNLFGKSHVGHFEMLNLLDSHFLKKE 224
>gi|115389354|ref|XP_001212182.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114194578|gb|EAU36278.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 388
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+S EL V+ R+ IV +W YIR LQ+ KR + CD LR +F D +
Sbjct: 261 LSKELAEVLDVEEETRSGIVLGIWDYIRAMGLQENEEKRLVRCDHRLRAIFGRDQMFFPQ 320
Query: 239 MNKLLAKHIIPLEPTK 254
+ + + H PL+P K
Sbjct: 321 IPESIGPHTSPLDPIK 336
>gi|26344411|dbj|BAC35856.1| unnamed protein product [Mus musculus]
Length = 305
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 170 PGGLNKVCGV-------------SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
PG +N C V P L ++G R I++ LW YI+ + LQDP +
Sbjct: 65 PGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHER 124
Query: 217 RKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEP 252
++CD L+ +FE+ ++ + L ++P EP
Sbjct: 125 EFVLCDKYLQQIFESQRMKFSEIPQRLHALLMPPEP 160
>gi|326434965|gb|EGD80535.1| hypothetical protein PTSG_01126 [Salpingoeca sp. ATCC 50818]
Length = 436
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 191 AMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHIIPL 250
+ P ++ K LW YIR++NLQD ++ I CD L+ F + +M L+ ++P+
Sbjct: 192 SAPELDVNKHLWTYIREHNLQDERDRHVIRCDQPLQSAFGVGTFKVSEMASLVRTCLLPM 251
Query: 251 EPTK 254
+P +
Sbjct: 252 DPLR 255
>gi|413952456|gb|AFW85105.1| hypothetical protein ZEAMMB73_878157 [Zea mays]
Length = 1704
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
Query: 189 QPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKH-- 246
+ + R ++ L YI++N L+DP K +IICD L+ +F + F+M KLL H
Sbjct: 745 KSVISRYDVQPLLLDYIKRNKLRDPRRKSQIICDSLLQSLFAKERVGHFEMLKLLESHFF 804
Query: 247 ---IIPLEPTKESSKRFKPDAESTTEGMESGPSSVIIS 281
+ P++ + PD +G + +SV++S
Sbjct: 805 MSEVSPIDADENHGGVVDPDPSQDADG--NSEASVVMS 840
>gi|357163026|ref|XP_003579601.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Brachypodium
distachyon]
Length = 526
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%)
Query: 183 LQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKL 242
L V+G R ++ LW YI+ LQ+P + ICD L+ VF D +++
Sbjct: 315 LMEVLGVEVDTRARVIAALWQYIKAKKLQNPGDPSYFICDPQLKKVFGEDKMRFAMLSQK 374
Query: 243 LAKHIIP 249
+++H+ P
Sbjct: 375 ISQHLAP 381
>gi|242073050|ref|XP_002446461.1| hypothetical protein SORBIDRAFT_06g016360 [Sorghum bicolor]
gi|241937644|gb|EES10789.1| hypothetical protein SORBIDRAFT_06g016360 [Sorghum bicolor]
Length = 98
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 291 GGR-EMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARN 349
GGR +M RVW YIK N L+DP N ++ CD KL+ +L +S L M+ +
Sbjct: 32 GGRSQMSHISFFLRVWSYIKDNKLQDPTNRNIVKCDEKLKTVLLGKSKVELSELPMIVKL 91
Query: 350 HF 351
HF
Sbjct: 92 HF 93
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 25/42 (59%)
Query: 188 GQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF 229
G+ M ++W+YI+ N LQDP+N+ + CD+ L+ V
Sbjct: 33 GRSQMSHISFFLRVWSYIKDNKLQDPTNRNIVKCDEKLKTVL 74
>gi|50551591|ref|XP_503270.1| YALI0D25344p [Yarrowia lipolytica]
gi|49649138|emb|CAG81474.1| YALI0D25344p [Yarrowia lipolytica CLIB122]
Length = 385
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+S L ++ +++I+ LW YI+ ++LQ KR I CD+ LR +F + +
Sbjct: 182 LSEPLSEILALDEASKSDIILALWQYIKFHDLQQTEEKRNIKCDEPLRQLFGRNTVTFPE 241
Query: 239 MNKLLAKHIIPLEP 252
+ +L+ H++P EP
Sbjct: 242 IMELITPHLLPKEP 255
>gi|320169950|gb|EFW46849.1| hypothetical protein CAOG_04807 [Capsaspora owczarzaki ATCC 30864]
Length = 616
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%)
Query: 183 LQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKL 242
L ++G RT+++ LW Y++ + LQD +KR + CD L+ +F+ D + M L
Sbjct: 416 LSRLLGVAVATRTDVLFGLWQYVKVHQLQDREDKRLVNCDQGLKALFQNDKIALADMAVL 475
>gi|164427505|ref|XP_956011.2| hypothetical protein NCU03572 [Neurospora crassa OR74A]
gi|157071770|gb|EAA26775.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 483
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+SPEL V+ R E V L+ YI+ LQ+ KR CDD L+ + + + +
Sbjct: 254 LSPELSDVIDMTEATRQEAVAGLFEYIKLMKLQEDDEKRNFRCDDLLQKLIGRESGHIPQ 313
Query: 239 MNKLLAKHIIPLEPTK 254
+N+ + H+ PL P K
Sbjct: 314 LNEYVTPHLRPLPPIK 329
>gi|350288706|gb|EGZ69931.1| hypothetical protein NEUTE2DRAFT_90939 [Neurospora tetrasperma FGSC
2509]
Length = 489
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+SPEL V+ R E V L+ YI+ LQ+ KR CDD L+ + + + +
Sbjct: 260 LSPELSDVIDMTEATRQEAVAGLFEYIKLMKLQEDDEKRNFRCDDLLQKLIGRESGHIPQ 319
Query: 239 MNKLLAKHIIPLEPTK 254
+N+ + H+ PL P K
Sbjct: 320 LNEYVTPHLRPLPPIK 335
>gi|413933851|gb|AFW68402.1| hypothetical protein ZEAMMB73_795146 [Zea mays]
Length = 1491
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 201 LWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLE---PTKESS 257
L YI++NNL DP K +IICD L +F+ D F+M KLL H + + P +S
Sbjct: 203 LLEYIKQNNLHDPRRKSQIICDARLSNLFKKPRVDHFEMLKLLEMHYLVKQASTPNADSQ 262
Query: 258 KRFKPDAESTTEG 270
+ D+ G
Sbjct: 263 RAIYSDSAQVNNG 275
Score = 38.5 bits (88), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 4/94 (4%)
Query: 266 STTEGMESGPSSVIISEALAKFLG---TGGREML-QAEATKRVWEYIKVNHLEDPLNSMV 321
ST EGM S L +F+G G + Q + + EYIK N+L DP
Sbjct: 161 STGEGMALAGDKNWASSELLEFIGHMRNGDNSYISQFDVQVLLLEYIKQNNLHDPRRKSQ 220
Query: 322 ILCDAKLRELLGCESISALGIQEMLARNHFLRQS 355
I+CDA+L L + + ++L ++ ++Q+
Sbjct: 221 IICDARLSNLFKKPRVDHFEMLKLLEMHYLVKQA 254
>gi|28881132|emb|CAD70303.1| related to SWI/SNF complex 60 KDa subunit [Neurospora crassa]
Length = 489
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+SPEL V+ R E V L+ YI+ LQ+ KR CDD L+ + + + +
Sbjct: 260 LSPELSDVIDMTEATRQEAVAGLFEYIKLMKLQEDDEKRNFRCDDLLQKLIGRESGHIPQ 319
Query: 239 MNKLLAKHIIPLEPTK 254
+N+ + H+ PL P K
Sbjct: 320 LNEYVTPHLRPLPPIK 335
>gi|348537318|ref|XP_003456142.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1 isoform 2
[Oreochromis niloticus]
Length = 473
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+ P L ++G R I++ LW Y++ + LQDP + I CD L+ +FET +
Sbjct: 296 LDPRLARMLGIHTQTRPVIIQALWQYVKTHKLQDPHEREFINCDKYLQQIFETQRMKFSE 355
Query: 239 MNKLLAKHIIPLEP 252
+ + L ++P EP
Sbjct: 356 IPQRLHALLMPPEP 369
>gi|356513671|ref|XP_003525534.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Glycine max]
Length = 513
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 37/69 (53%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
VSP+L V+G R I+ LW Y++ LQ P++ +CD +L+ VF D
Sbjct: 301 VSPQLARVLGVEFDSRARIIAALWHYVKAKKLQSPNDPSFFMCDTSLQKVFGEDKMKFSV 360
Query: 239 MNKLLAKHI 247
++ +++H+
Sbjct: 361 ASQKISQHL 369
>gi|348537316|ref|XP_003456141.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1 isoform 1
[Oreochromis niloticus]
Length = 514
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+ P L ++G R I++ LW Y++ + LQDP + I CD L+ +FET +
Sbjct: 296 LDPRLARMLGIHTQTRPVIIQALWQYVKTHKLQDPHEREFINCDKYLQQIFETQRMKFSE 355
Query: 239 MNKLLAKHIIPLEP 252
+ + L ++P EP
Sbjct: 356 IPQRLHALLMPPEP 369
>gi|440639214|gb|ELR09133.1| hypothetical protein GMDG_03713 [Geomyces destructans 20631-21]
Length = 286
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 35/75 (46%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+SP L ++ R E V +W Y++ LQ+ KR CDD LR VF+ D +
Sbjct: 68 LSPPLAEILDMKEATRAETVTGIWEYVKVMGLQEDDEKRSFRCDDILRQVFQRDTGYIPS 127
Query: 239 MNKLLAKHIIPLEPT 253
+ + H+ L P
Sbjct: 128 ITDAIIPHLSALPPV 142
>gi|38198635|ref|NP_938172.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 1 [Danio rerio]
gi|29387084|gb|AAH49347.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 1 [Danio rerio]
gi|46249729|gb|AAH68407.1| Smarcd1 protein [Danio rerio]
gi|182889574|gb|AAI65365.1| Smarcd1 protein [Danio rerio]
Length = 510
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+ P L ++G R I++ LW Y++ + LQDP + I CD L+ +FET +
Sbjct: 292 LDPRLARLLGIHTQTRPVIIQALWQYVKTHKLQDPHEREFINCDKYLQQIFETQRMKFSE 351
Query: 239 MNKLLAKHIIPLEP 252
+ + L ++P EP
Sbjct: 352 IPQRLHALLMPPEP 365
>gi|317418744|emb|CBN80782.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 1 [Dicentrarchus labrax]
Length = 514
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+ P L ++G R I++ LW Y++ + LQDP + I CD L+ +FET +
Sbjct: 296 LDPRLARMLGIHTQTRPVIIQALWQYVKTHKLQDPHEREFINCDKYLQQIFETQRMKFSE 355
Query: 239 MNKLLAKHIIPLEP 252
+ + L ++P EP
Sbjct: 356 IPQRLHALLMPPEP 369
>gi|90083845|dbj|BAE90873.1| unnamed protein product [Macaca fascicularis]
gi|119578525|gb|EAW58121.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 1, isoform CRA_b [Homo
sapiens]
Length = 229
Score = 45.1 bits (105), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+ P L ++G R I++ LW YI+ + LQDP + +ICD L+ +FE+ +
Sbjct: 11 LDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVICDKYLQQIFESQRMKFSE 70
Query: 239 MNKLLAKHIIPLEP 252
+ + L ++P EP
Sbjct: 71 IPQRLHALLMPPEP 84
>gi|255935395|ref|XP_002558724.1| Pc13g02850 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583344|emb|CAP91354.1| Pc13g02850 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 494
Score = 45.1 bits (105), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+S EL V+ R+ IV +W YIR LQ+ KR++ CD LR +F + +
Sbjct: 272 LSKELAEVLDVEEETRSGIVLGIWDYIRAMELQEDEEKRQVRCDHRLRSIFGREQMFFPQ 331
Query: 239 MNKLLAKHIIPLEPTK 254
+ + + H P+EP K
Sbjct: 332 IPESVGPHTSPMEPIK 347
>gi|432858243|ref|XP_004068863.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1-like
[Oryzias latipes]
Length = 514
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+ P L ++G R I++ LW Y++ + LQDP + I CD L +FET +
Sbjct: 296 LDPRLARMLGIHTQTRPVIIQALWQYVKTHKLQDPHEREFINCDKYLHQIFETQRMKFSE 355
Query: 239 MNKLLAKHIIPLEP 252
+ + L ++P EP
Sbjct: 356 IPQRLHALLMPPEP 369
>gi|336275222|ref|XP_003352364.1| hypothetical protein SMAC_07805 [Sordaria macrospora k-hell]
Length = 848
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+SPEL V+ R E V L+ YIR LQ+ KR CD+ L+ + + + +
Sbjct: 263 ISPELSDVIDMSEATRQEAVAGLFEYIRLMKLQEDDEKRNFRCDELLQKLIGRESGHIPQ 322
Query: 239 MNKLLAKHIIPLEPTK 254
+N + H+ PL P K
Sbjct: 323 LNDYVTPHLKPLPPIK 338
>gi|328876345|gb|EGG24708.1| CHC group protein [Dictyostelium fasciculatum]
Length = 443
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 196 EIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEP 252
+I+ LW YI+ N L D +K K++CDD L+ +F D ++ +LL +H+ P +P
Sbjct: 244 KIISALWNYIKVNRLLDLESK-KVLCDDQLKNIFGVDSMQFNQIPQLLREHLGPADP 299
>gi|222640825|gb|EEE68957.1| hypothetical protein OsJ_27851 [Oryza sativa Japonica Group]
Length = 333
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 33/54 (61%)
Query: 295 MLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLAR 348
M + E K++W YI+ N+L+DP N I+C+ +LR + +S + ++LA+
Sbjct: 174 MARTEIVKQLWAYIRRNNLQDPNNKRKIICNDELRLVFETDSTDMFKMNKLLAK 227
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 38/67 (56%), Gaps = 8/67 (11%)
Query: 1 MVSDQEIAKGVETLLRQSDRNAS-------TSLNGVVKQLEAKLGLDLSHKAGFIRDQIS 53
M+SDQE+A+ VE+ +RQ+ S V +QL +LGLDL+ KA IRD I
Sbjct: 1 MLSDQELARYVESFVRQAAAVPGAVAAAGGISAESVARQLGPQLGLDLTPKAPLIRD-IL 59
Query: 54 LLLRSHP 60
L L S P
Sbjct: 60 LALFSPP 66
>gi|380088468|emb|CCC13623.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 849
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+SPEL V+ R E V L+ YIR LQ+ KR CD+ L+ + + + +
Sbjct: 264 ISPELSDVIDMSEATRQEAVAGLFEYIRLMKLQEDDEKRNFRCDELLQKLIGRESGHIPQ 323
Query: 239 MNKLLAKHIIPLEPTK 254
+N + H+ PL P K
Sbjct: 324 LNDYVTPHLKPLPPIK 339
>gi|326529873|dbj|BAK08216.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 465
Score = 44.7 bits (104), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 35/67 (52%)
Query: 183 LQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKL 242
L V+G R ++ LW YI+ LQ+PS+ +CD L+ VF D +++
Sbjct: 254 LMEVLGVEVDTRARVIAALWQYIKAKKLQNPSDPSYFMCDPQLKKVFGEDKMRFAMLSQK 313
Query: 243 LAKHIIP 249
+++H+ P
Sbjct: 314 ISQHLAP 320
>gi|449455860|ref|XP_004145668.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Cucumis
sativus]
gi|449515744|ref|XP_004164908.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Cucumis
sativus]
Length = 547
Score = 44.7 bits (104), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+SP L V+G R I+ +W Y++ LQ+P++ CD L+ VF D
Sbjct: 334 LSPALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPNDPSFFHCDPPLQKVFGEDKLKFTM 393
Query: 239 MNKLLAKHIIPLEP 252
+++ +++H+ P +P
Sbjct: 394 VSQRISQHLFPPQP 407
>gi|310796694|gb|EFQ32155.1| SWIB/MDM2 domain-containing protein [Glomerella graminicola M1.001]
Length = 469
Score = 44.7 bits (104), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDAL-RVVFETDCTDMF 237
+SPEL +V R E V +W YI+ LQ+ KR CD+ L ++V +D +
Sbjct: 246 LSPELADIVDMTEASRQEAVLAVWEYIKMMGLQEDEEKRNFRCDELLKKIVNGSDVGIIP 305
Query: 238 KMNKLLAKHIIPLEP 252
+N + H+ PL P
Sbjct: 306 NLNDYIQPHLSPLPP 320
>gi|115372432|ref|ZP_01459741.1| SWIb domain-containing protein [Stigmatella aurantiaca DW4/3-1]
gi|310819580|ref|YP_003951938.1| swib/mdm2 domain-containing protein [Stigmatella aurantiaca
DW4/3-1]
gi|115370645|gb|EAU69571.1| SWIb domain-containing protein [Stigmatella aurantiaca DW4/3-1]
gi|309392652|gb|ADO70111.1| SWIB/MDM2 domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 106
Score = 44.3 bits (103), Expect = 0.086, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 34/51 (66%), Gaps = 5/51 (9%)
Query: 180 SPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKII-CDDALRVVF 229
+PEL AVVG +PRT ++K+LW Y +KN L N+ ++I DD L+ V+
Sbjct: 40 TPELAAVVGDKPLPRTAVIKKLWDYFKKNGL----NQGQLINLDDNLKKVY 86
>gi|47220711|emb|CAG11780.1| unnamed protein product [Tetraodon nigroviridis]
Length = 529
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+ P L ++G R I++ LW Y++ + LQDP + I CD L+ +FET +
Sbjct: 311 LDPRLARMLGIHTQTRPVIIQALWQYVKTHKLQDPHEREFINCDKYLQQIFETQRMKFSE 370
Query: 239 MNKLLAKHIIPLEP 252
+ + L ++P +P
Sbjct: 371 IPQRLHALLMPPDP 384
>gi|357140816|ref|XP_003571959.1| PREDICTED: uncharacterized protein LOC100833705 [Brachypodium
distachyon]
Length = 1599
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 53/119 (44%), Gaps = 14/119 (11%)
Query: 137 QPHSNVS--KAEAFPQISAEVAKENPPVGAKRRGGPGGLNKVCGVSPELQAVVG------ 188
Q H ++ K E +++ + KE P G G P S EL +G
Sbjct: 336 QTHGGITARKYEISNKVAESLPKEVPFEGTNLLGDPKW------ASLELLEFIGHMRNGD 389
Query: 189 QPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHI 247
Q + + ++ L YI++NNL+DP K +IICD L +F F+M KLL H
Sbjct: 390 QSQISQFDVQVLLLEYIKQNNLRDPRKKSQIICDTRLSSLFRKPRVGHFEMLKLLELHF 448
>gi|358396113|gb|EHK45500.1| hypothetical protein TRIATDRAFT_284405 [Trichoderma atroviride IMI
206040]
Length = 460
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+SPEL VV + E V LW YIR + LQ+ +R CD L+ V D +
Sbjct: 244 LSPELAQVVDMTEATQHEAVMALWEYIRLSGLQEDEERRNFRCDPYLKKVIGRDSGIIPM 303
Query: 239 MNKLLAKHIIPLEP 252
+++ + H+ PL P
Sbjct: 304 LSEYVMPHLRPLPP 317
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.132 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,804,846,238
Number of Sequences: 23463169
Number of extensions: 264909928
Number of successful extensions: 1543751
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1688
Number of HSP's successfully gapped in prelim test: 11114
Number of HSP's that attempted gapping in prelim test: 1396499
Number of HSP's gapped (non-prelim): 88015
length of query: 355
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 212
effective length of database: 9,003,962,200
effective search space: 1908839986400
effective search space used: 1908839986400
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 77 (34.3 bits)