Query 018464
Match_columns 355
No_of_seqs 278 out of 1100
Neff 6.5
Searched_HMMs 46136
Date Fri Mar 29 09:14:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018464.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018464hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2863 RNA lariat debranching 100.0 2E-108 5E-113 783.5 18.0 351 1-354 1-358 (456)
2 cd00844 MPP_Dbr1_N Dbr1 RNA la 100.0 1.2E-72 2.7E-77 534.8 25.6 257 3-259 1-262 (262)
3 KOG2476 Uncharacterized conser 100.0 2.3E-39 5E-44 317.9 19.6 227 1-266 6-243 (528)
4 cd07380 MPP_CWF19_N Schizosacc 100.0 4.1E-38 8.8E-43 275.6 13.7 144 4-252 1-150 (150)
5 PF05011 DBR1: Lariat debranch 100.0 1.8E-32 3.8E-37 238.6 11.1 121 235-355 1-133 (145)
6 cd07388 MPP_Tt1561 Thermus the 99.9 3E-22 6.4E-27 186.3 20.6 208 1-265 5-217 (224)
7 cd07392 MPP_PAE1087 Pyrobaculu 99.9 5.1E-21 1.1E-25 169.9 19.0 187 3-250 1-188 (188)
8 COG2129 Predicted phosphoester 99.8 4.9E-18 1.1E-22 156.0 20.4 209 1-265 4-215 (226)
9 PF14582 Metallophos_3: Metall 99.7 2E-16 4.4E-21 145.4 14.7 211 2-252 7-235 (255)
10 cd07397 MPP_DevT Myxococcus xa 99.6 3.2E-15 7E-20 140.1 14.2 211 1-252 1-234 (238)
11 cd07379 MPP_239FB Homo sapiens 99.6 5.6E-14 1.2E-18 120.0 12.9 134 2-250 1-135 (135)
12 TIGR03729 acc_ester putative p 99.5 7.5E-13 1.6E-17 123.7 15.3 208 2-250 1-236 (239)
13 KOG3947 Phosphoesterases [Gene 99.5 3.9E-13 8.5E-18 126.4 11.6 207 2-267 63-299 (305)
14 PF00149 Metallophos: Calcineu 99.5 3.7E-13 8E-18 112.7 10.3 189 1-230 1-200 (200)
15 cd07402 MPP_GpdQ Enterobacter 99.5 5E-12 1.1E-16 117.1 18.6 196 2-252 1-210 (240)
16 cd07404 MPP_MS158 Microscilla 99.4 4.5E-12 9.7E-17 111.6 11.4 153 3-235 1-154 (166)
17 cd07403 MPP_TTHA0053 Thermus t 99.3 1.5E-11 3.3E-16 104.9 10.7 67 168-251 57-123 (129)
18 PF12850 Metallophos_2: Calcin 99.3 4.4E-11 9.6E-16 102.8 12.3 149 1-264 1-153 (156)
19 PRK11148 cyclic 3',5'-adenosin 99.2 1.3E-09 2.9E-14 103.9 19.7 183 1-234 15-211 (275)
20 cd00841 MPP_YfcE Escherichia c 99.2 1.2E-09 2.5E-14 94.9 15.5 59 2-88 1-59 (155)
21 cd07396 MPP_Nbla03831 Homo sap 99.2 3.4E-09 7.4E-14 100.8 19.7 106 1-126 1-121 (267)
22 cd07393 MPP_DR1119 Deinococcus 99.2 2.5E-09 5.4E-14 99.8 18.0 182 3-233 1-208 (232)
23 TIGR00040 yfcE phosphoesterase 99.1 1.2E-09 2.5E-14 95.7 14.1 64 1-88 1-64 (158)
24 cd07385 MPP_YkuE_C Bacillus su 99.1 1.3E-09 2.8E-14 99.8 13.2 104 1-121 2-110 (223)
25 cd00838 MPP_superfamily metall 99.1 1.2E-09 2.7E-14 89.2 11.2 119 4-234 1-119 (131)
26 PRK05340 UDP-2,3-diacylglucosa 99.1 2.2E-09 4.8E-14 100.6 13.8 113 1-126 1-116 (241)
27 cd07400 MPP_YydB Bacillus subt 99.0 3E-09 6.5E-14 91.1 12.5 50 170-235 81-130 (144)
28 cd00839 MPP_PAPs purple acid p 98.9 9.5E-09 2.1E-13 98.2 13.1 189 1-230 5-205 (294)
29 cd00840 MPP_Mre11_N Mre11 nucl 98.9 3.8E-09 8.2E-14 96.2 9.5 183 2-232 1-203 (223)
30 PRK04036 DNA polymerase II sma 98.9 5.3E-08 1.2E-12 100.9 18.1 126 1-127 244-388 (504)
31 TIGR01854 lipid_A_lpxH UDP-2,3 98.9 1.2E-07 2.5E-12 88.5 17.8 111 3-126 1-114 (231)
32 cd07395 MPP_CSTP1 Homo sapiens 98.9 3.8E-07 8.3E-12 86.1 20.7 195 2-234 6-222 (262)
33 PLN02533 probable purple acid 98.8 1.4E-07 3E-12 95.9 16.8 181 1-233 140-336 (427)
34 cd08163 MPP_Cdc1 Saccharomyces 98.8 2.4E-07 5.2E-12 88.2 17.2 174 30-234 45-232 (257)
35 PRK11340 phosphodiesterase Yae 98.8 1.2E-07 2.6E-12 90.6 15.0 104 1-124 50-166 (271)
36 cd07401 MPP_TMEM62_N Homo sapi 98.8 2.4E-07 5.1E-12 87.9 16.8 191 3-232 2-212 (256)
37 cd07399 MPP_YvnB Bacillus subt 98.8 4.2E-07 9.1E-12 83.9 17.1 195 1-270 1-205 (214)
38 cd07394 MPP_Vps29 Homo sapiens 98.8 2.8E-07 6E-12 83.0 14.8 38 210-253 98-135 (178)
39 cd07378 MPP_ACP5 Homo sapiens 98.8 4E-07 8.7E-12 86.3 16.7 207 1-251 1-230 (277)
40 PHA02546 47 endonuclease subun 98.7 1.2E-07 2.6E-12 93.6 13.4 110 1-123 1-128 (340)
41 PRK09453 phosphodiesterase; Pr 98.7 5.9E-08 1.3E-12 87.0 9.9 106 1-126 1-106 (182)
42 cd07386 MPP_DNA_pol_II_small_a 98.7 2.8E-07 6E-12 86.4 13.5 220 4-269 2-236 (243)
43 COG0622 Predicted phosphoester 98.6 1.6E-07 3.5E-12 84.3 8.3 89 1-126 2-90 (172)
44 PHA03008 hypothetical protein; 98.6 1.6E-07 3.4E-12 84.7 7.6 96 102-228 99-202 (234)
45 cd07383 MPP_Dcr2 Saccharomyces 98.6 1.1E-06 2.3E-11 79.8 12.7 74 1-86 3-87 (199)
46 PHA02239 putative protein phos 98.5 2.7E-07 5.9E-12 86.7 7.1 73 1-88 1-73 (235)
47 COG1409 Icc Predicted phosphoh 98.4 1.2E-05 2.5E-10 75.7 16.9 77 1-93 1-83 (301)
48 cd00845 MPP_UshA_N_like Escher 98.4 6.6E-06 1.4E-10 77.0 14.6 112 1-127 1-136 (252)
49 PRK00166 apaH diadenosine tetr 98.4 3.1E-07 6.7E-12 88.3 5.2 69 1-88 1-69 (275)
50 COG1768 Predicted phosphohydro 98.4 1.3E-05 2.9E-10 71.9 14.1 174 1-229 1-198 (230)
51 cd07410 MPP_CpdB_N Escherichia 98.3 3.1E-05 6.8E-10 73.9 17.5 223 1-265 1-257 (277)
52 cd07423 MPP_PrpE Bacillus subt 98.3 7.5E-07 1.6E-11 83.3 5.4 73 1-88 1-80 (234)
53 COG0420 SbcD DNA repair exonuc 98.3 2.3E-06 4.9E-11 85.7 7.8 78 1-91 1-91 (390)
54 cd08166 MPP_Cdc1_like_1 unchar 98.2 1.4E-05 3E-10 73.2 12.0 42 170-236 112-153 (195)
55 cd07424 MPP_PrpA_PrpB PrpA and 98.2 2.1E-06 4.6E-11 78.6 6.4 67 1-88 1-67 (207)
56 cd07406 MPP_CG11883_N Drosophi 98.2 0.00018 3.9E-09 68.3 18.6 207 1-266 1-234 (257)
57 TIGR00619 sbcd exonuclease Sbc 98.2 4.3E-06 9.3E-11 79.3 7.3 79 1-91 1-91 (253)
58 TIGR00583 mre11 DNA repair pro 98.1 8.2E-06 1.8E-10 82.5 9.2 81 1-89 4-124 (405)
59 cd07398 MPP_YbbF-LpxH Escheric 98.1 1.1E-05 2.5E-10 73.4 9.0 86 30-127 30-117 (217)
60 cd07409 MPP_CD73_N CD73 ecto-5 98.1 0.00035 7.6E-09 67.1 18.6 112 1-127 1-149 (281)
61 cd07412 MPP_YhcR_N Bacillus su 98.1 0.00017 3.8E-09 69.5 16.3 223 1-266 1-271 (288)
62 PRK10966 exonuclease subunit S 98.1 9.9E-06 2.1E-10 82.0 7.7 79 1-91 1-90 (407)
63 PRK11439 pphA serine/threonine 98.1 5.5E-06 1.2E-10 76.7 5.3 67 1-88 17-83 (218)
64 cd00842 MPP_ASMase acid sphing 98.0 0.00014 3.1E-09 69.8 14.5 191 14-235 53-266 (296)
65 PRK13625 bis(5'-nucleosyl)-tet 98.0 7.5E-06 1.6E-10 77.2 5.5 73 1-88 1-79 (245)
66 PRK09968 serine/threonine-spec 98.0 7.4E-06 1.6E-10 76.0 4.3 66 2-88 16-81 (218)
67 TIGR00668 apaH bis(5'-nucleosy 98.0 8.3E-06 1.8E-10 78.4 4.7 69 1-88 1-69 (279)
68 cd07425 MPP_Shelphs Shewanella 97.9 2.4E-05 5.2E-10 72.1 6.1 75 4-88 1-80 (208)
69 cd00144 MPP_PPP_family phospho 97.9 2.2E-05 4.7E-10 72.0 5.8 68 4-88 1-68 (225)
70 cd07408 MPP_SA0022_N Staphyloc 97.9 0.00018 4E-09 68.0 12.3 111 1-127 1-135 (257)
71 cd07421 MPP_Rhilphs Rhilph pho 97.9 4.1E-05 8.9E-10 74.2 7.8 74 2-88 3-80 (304)
72 cd08162 MPP_PhoA_N Synechococc 97.9 0.0022 4.7E-08 62.8 20.0 119 1-127 1-165 (313)
73 cd07411 MPP_SoxB_N Thermus the 97.9 0.00052 1.1E-08 65.2 15.2 111 1-127 1-147 (264)
74 cd07422 MPP_ApaH Escherichia c 97.8 1.7E-05 3.6E-10 75.7 4.6 67 3-88 1-67 (257)
75 cd07413 MPP_PA3087 Pseudomonas 97.8 3.7E-05 8E-10 71.5 6.1 70 4-88 2-76 (222)
76 cd07405 MPP_UshA_N Escherichia 97.8 0.00096 2.1E-08 64.3 16.0 193 1-232 1-223 (285)
77 TIGR01530 nadN NAD pyrophospha 97.8 0.00035 7.6E-09 73.4 13.6 110 1-125 1-146 (550)
78 PRK09419 bifunctional 2',3'-cy 97.8 0.00058 1.3E-08 77.7 16.2 191 1-235 661-887 (1163)
79 cd07387 MPP_PolD2_C PolD2 (DNA 97.6 0.0022 4.7E-08 61.3 14.2 189 30-265 42-248 (257)
80 KOG2679 Purple (tartrate-resis 97.5 0.00086 1.9E-08 64.0 11.2 236 1-278 44-298 (336)
81 COG0737 UshA 5'-nucleotidase/2 97.5 0.0018 4E-08 67.4 14.9 112 1-126 27-167 (517)
82 cd07390 MPP_AQ1575 Aquifex aeo 97.5 0.00045 9.7E-09 61.2 8.4 98 4-124 2-114 (168)
83 COG1311 HYS2 Archaeal DNA poly 97.5 0.0024 5.2E-08 65.2 14.3 217 1-270 226-464 (481)
84 PTZ00422 glideosome-associated 97.4 0.011 2.4E-07 59.6 18.0 191 1-230 27-260 (394)
85 TIGR03767 P_acnes_RR metalloph 97.4 0.013 2.9E-07 60.4 18.6 56 165-231 336-393 (496)
86 PRK09558 ushA bifunctional UDP 97.4 0.0039 8.4E-08 65.5 14.7 112 1-126 35-172 (551)
87 KOG1378 Purple acid phosphatas 97.3 0.0026 5.6E-08 64.8 12.4 187 2-234 149-350 (452)
88 cd07391 MPP_PF1019 Pyrococcus 97.3 0.00053 1.1E-08 61.0 6.6 72 4-88 1-88 (172)
89 smart00156 PP2Ac Protein phosp 97.3 0.00048 1E-08 66.1 6.2 72 1-88 28-99 (271)
90 TIGR00024 SbcD_rel_arch putati 97.2 0.001 2.3E-08 62.1 7.4 71 2-88 16-102 (225)
91 cd07416 MPP_PP2B PP2B, metallo 97.1 0.00076 1.6E-08 65.9 6.1 70 2-88 44-114 (305)
92 cd07420 MPP_RdgC Drosophila me 97.1 0.00072 1.6E-08 66.5 5.9 60 204-266 250-311 (321)
93 COG2908 Uncharacterized protei 97.1 0.0025 5.5E-08 59.8 9.0 108 4-125 1-113 (237)
94 PRK09418 bifunctional 2',3'-cy 97.1 0.021 4.5E-07 62.5 16.6 121 1-127 40-209 (780)
95 cd07414 MPP_PP1_PPKL PP1, PPKL 97.0 0.0012 2.6E-08 64.2 5.9 60 204-266 219-280 (293)
96 PRK09419 bifunctional 2',3'-cy 97.0 0.021 4.5E-07 65.3 16.3 196 1-232 42-282 (1163)
97 PTZ00480 serine/threonine-prot 96.9 0.0016 3.5E-08 64.1 6.2 60 204-266 228-289 (320)
98 cd07415 MPP_PP2A_PP4_PP6 PP2A, 96.9 0.0017 3.6E-08 62.9 5.6 70 2-88 43-113 (285)
99 PRK09420 cpdB bifunctional 2', 96.9 0.034 7.3E-07 59.8 15.9 116 1-126 26-182 (649)
100 PRK11907 bifunctional 2',3'-cy 96.9 0.029 6.3E-07 61.6 15.6 117 1-126 116-273 (814)
101 PTZ00239 serine/threonine prot 96.8 0.0022 4.8E-08 62.6 5.9 61 204-266 212-274 (303)
102 cd07417 MPP_PP5_C PP5, C-termi 96.7 0.0027 5.9E-08 62.3 6.2 59 204-265 230-290 (316)
103 PTZ00244 serine/threonine-prot 96.7 0.0024 5.2E-08 62.1 5.4 59 204-265 221-281 (294)
104 COG1407 Predicted ICC-like pho 96.7 0.0064 1.4E-07 57.2 7.7 74 2-88 21-110 (235)
105 TIGR01390 CycNucDiestase 2',3' 96.7 0.064 1.4E-06 57.5 16.3 117 1-127 3-160 (626)
106 cd07382 MPP_DR1281 Deinococcus 96.6 0.037 8.1E-07 52.8 12.7 104 2-124 1-113 (255)
107 cd07419 MPP_Bsu1_C Arabidopsis 96.5 0.0065 1.4E-07 59.5 7.3 60 204-266 239-300 (311)
108 KOG2310 DNA repair exonuclease 96.5 0.0068 1.5E-07 62.6 7.5 79 1-88 14-133 (646)
109 PF04042 DNA_pol_E_B: DNA poly 96.5 0.02 4.3E-07 52.1 9.9 122 3-126 1-137 (209)
110 cd07418 MPP_PP7 PP7, metalloph 96.5 0.005 1.1E-07 61.8 6.1 70 2-88 67-138 (377)
111 cd07384 MPP_Cdc1_like Saccharo 96.5 0.0087 1.9E-07 53.5 7.0 52 30-87 45-99 (171)
112 cd08165 MPP_MPPE1 human MPPE1 96.4 0.01 2.2E-07 52.1 7.2 50 30-87 38-88 (156)
113 COG4186 Predicted phosphoester 96.4 0.0083 1.8E-07 53.0 6.3 69 2-88 5-86 (186)
114 cd07407 MPP_YHR202W_N Saccharo 96.4 0.018 4E-07 55.6 9.3 114 1-126 6-155 (282)
115 COG1408 Predicted phosphohydro 96.0 0.015 3.2E-07 56.3 6.3 76 1-90 45-120 (284)
116 TIGR00282 metallophosphoestera 95.9 0.05 1.1E-06 52.3 9.5 41 1-43 1-43 (266)
117 KOG3325 Membrane coat complex 95.6 0.06 1.3E-06 47.3 7.9 111 1-173 1-113 (183)
118 KOG3662 Cell division control 95.1 0.07 1.5E-06 54.0 7.6 52 30-88 93-144 (410)
119 cd08164 MPP_Ted1 Saccharomyces 94.9 0.094 2E-06 48.1 7.2 52 30-87 44-110 (193)
120 KOG0373 Serine/threonine speci 93.8 0.13 2.7E-06 48.1 5.6 69 3-88 48-117 (306)
121 KOG0372 Serine/threonine speci 93.3 0.17 3.7E-06 48.0 5.7 69 3-88 45-114 (303)
122 cd07381 MPP_CapA CapA and rela 92.9 4.8 0.0001 37.4 14.9 56 72-128 74-141 (239)
123 TIGR03768 RPA4764 metallophosp 92.6 0.23 5.1E-06 51.1 5.9 62 13-88 84-170 (492)
124 KOG0374 Serine/threonine speci 91.7 0.27 5.9E-06 48.7 5.1 60 204-266 230-291 (331)
125 smart00854 PGA_cap Bacterial c 91.2 13 0.00027 34.7 18.3 113 2-128 1-137 (239)
126 KOG0371 Serine/threonine prote 90.6 0.57 1.2E-05 44.8 5.8 69 3-89 62-132 (319)
127 COG1692 Calcineurin-like phosp 89.2 0.76 1.7E-05 43.6 5.4 42 1-44 1-44 (266)
128 KOG1432 Predicted DNA repair e 87.5 0.89 1.9E-05 45.1 4.9 52 30-92 100-151 (379)
129 KOG3818 DNA polymerase epsilon 86.1 5.5 0.00012 40.9 9.7 109 2-125 284-408 (525)
130 KOG0375 Serine-threonine phosp 85.9 1.3 2.8E-05 44.3 5.1 69 3-88 90-159 (517)
131 KOG2863 RNA lariat debranching 82.4 0.95 2.1E-05 45.2 2.5 61 272-333 357-423 (456)
132 COG1058 CinA Predicted nucleot 72.2 23 0.00049 34.0 8.6 107 2-127 39-154 (255)
133 KOG0377 Protein serine/threoni 69.9 1.6 3.6E-05 44.6 0.4 69 3-88 167-237 (631)
134 cd07389 MPP_PhoD Bacillus subt 69.1 7.8 0.00017 35.3 4.7 40 2-43 1-42 (228)
135 KOG3770 Acid sphingomyelinase 68.9 15 0.00032 39.1 7.0 68 12-88 193-263 (577)
136 PF10686 DUF2493: Protein of u 68.7 14 0.00031 28.2 5.3 37 1-40 4-41 (71)
137 PTZ00235 DNA polymerase epsilo 67.4 18 0.0004 35.2 6.9 43 1-43 28-76 (291)
138 PF09423 PhoD: PhoD-like phosp 59.9 7.4 0.00016 39.8 2.9 39 1-44 106-146 (453)
139 KOG1625 DNA polymerase alpha-p 51.6 1.3E+02 0.0027 32.2 10.1 107 13-124 358-473 (600)
140 cd08165 MPP_MPPE1 human MPPE1 48.7 17 0.00036 31.7 2.9 21 213-233 117-137 (156)
141 PF13277 YmdB: YmdB-like prote 48.6 39 0.00085 32.3 5.5 40 4-45 1-42 (253)
142 PF13483 Lactamase_B_3: Beta-l 42.3 1.2E+02 0.0026 25.9 7.4 23 204-226 141-163 (163)
143 KOG3592 Microtubule-associated 37.6 61 0.0013 35.5 5.4 57 61-127 4-67 (934)
144 PF03490 Varsurf_PPLC: Variant 33.5 33 0.00072 24.6 1.9 27 61-90 12-38 (51)
145 KOG1752 Glutaredoxin and relat 31.6 47 0.001 27.4 2.8 40 61-102 55-95 (104)
146 TIGR03768 RPA4764 metallophosp 29.9 1.2E+02 0.0025 31.9 5.9 23 209-231 389-412 (492)
147 COG2047 Uncharacterized protei 28.5 50 0.0011 31.2 2.7 19 30-48 83-101 (258)
148 TIGR03413 GSH_gloB hydroxyacyl 27.3 85 0.0018 29.4 4.2 35 2-39 120-164 (248)
149 cd06403 PB1_Par6 The PB1 domai 26.7 3.2E+02 0.007 21.6 6.9 41 5-47 16-60 (80)
150 COG5214 POL12 DNA polymerase a 25.2 2.6E+02 0.0056 29.0 7.2 106 13-126 322-440 (581)
151 cd07384 MPP_Cdc1_like Saccharo 22.9 1E+02 0.0022 27.2 3.6 21 213-233 129-149 (171)
152 PF14529 Exo_endo_phos_2: Endo 22.8 1E+02 0.0022 24.4 3.3 30 12-43 13-42 (119)
153 KOG4419 5' nucleotidase [Nucle 22.6 5.3E+02 0.011 27.9 9.2 28 13-42 71-99 (602)
154 PF02844 GARS_N: Phosphoribosy 22.5 84 0.0018 25.8 2.7 31 1-37 1-31 (100)
155 cd00293 USP_Like Usp: Universa 22.2 3.7E+02 0.0079 20.6 6.9 81 2-85 1-81 (130)
156 COG0622 Predicted phosphoester 21.6 3.7E+02 0.0079 24.0 6.9 59 166-253 80-138 (172)
157 PF03492 Methyltransf_7: SAM d 21.1 2E+02 0.0044 28.4 5.6 73 1-84 18-97 (334)
158 PF00462 Glutaredoxin: Glutare 20.2 97 0.0021 21.8 2.4 12 74-85 48-59 (60)
No 1
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=100.00 E-value=2.1e-108 Score=783.51 Aligned_cols=351 Identities=57% Similarity=0.977 Sum_probs=335.6
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhcCCCCCCccEEE
Q 018464 1 MRIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIF 80 (355)
Q Consensus 1 mkIlv~GD~HG~ld~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~g~~~~p~pt~f 80 (355)
|||||.|||||+||+||++|+.++++.+.++||||||||||+.||..|+.+||||+|||+|++|++||+|+.+||+||||
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTIF 80 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTIF 80 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEEE
Confidence 99999999999999999999999999888999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCCChhhHHHHhhCCccCCceEEeCCceEEEEcCEEEEEecCcCCCcccCCCCCCCCCCChhhHhhhhhhhhHHHHH
Q 018464 81 IGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHK 160 (355)
Q Consensus 81 I~GNHE~~~~l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~~e~~py~~~~~rs~yh~re~dv~~ 160 (355)
||||||+++||+||++||||||||||||.+||++++|+||||+||||+++||+++|+|++||+.+++||+||+|+.||.+
T Consensus 81 IGGNHEAsnyL~eLpyGGwVApNIyYlG~agVv~~~gvRIggiSGI~k~~dy~kgh~E~ppyn~stiRsiYHvR~~dV~~ 160 (456)
T KOG2863|consen 81 IGGNHEASNYLQELPYGGWVAPNIYYLGYAGVVNFGGVRIGGISGIYKEHDYRKGHFEWPPYNNSTIRSIYHVRISDVAK 160 (456)
T ss_pred ecCchHHHHHHHhcccCceeccceEEeeecceEEECCEEEeeccchhhhhhcccCCCCCCCccchhhhhhhhhhhhhhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhccCCCccEEEeCCCCCCCccCCcchhhhhhccchhhcccCCCCCcHHHHHHHHHhCCCEEEEeCCCCccceeeccCCC
Q 018464 161 LMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVVQHGED 240 (355)
Q Consensus 161 L~~~~~~vDIllTHdwP~gi~~~g~~~~l~~~kp~f~~~~~~~~lGS~~l~~ll~~lkPrywfsgH~H~~f~a~~~~~~~ 240 (355)
|+++..++|||||||||+||..|||.++|+|.||||++|++.+.+||+++.+|+++|||+||||||+|++|+|.+.|+++
T Consensus 161 Lkqlk~piDIfLSHDWP~GI~~yGd~~~LLr~KPFFrqeie~~~LGSp~~~eLL~~LkP~yWfsAHLH~KFaA~v~H~~~ 240 (456)
T KOG2863|consen 161 LKQLKHPIDIFLSHDWPRGIYYYGDKKQLLRLKPFFRQEIEEGKLGSPALEELLEDLKPQYWFSAHLHVKFAALVQHNKR 240 (456)
T ss_pred HHhhcCcceEEeecCCCcchhhcCCHHHHHhcCcHHHHHHhcCCcCChHHHHHHHHhCcchhhhhhHhhHHhhhhcccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeEEEEccccCCCCCeeEEEeccCCC-CCceeeeChHHHHHHHhhCCCCCCCCCCCCCCCC---C---CChHHHHHHH
Q 018464 241 SPVTKFLALDKCLPRRKFLQVFEIESGQ-GPYEIQYDEEWLAITRTFNSVFPLTSQSANFGGV---Q---HDMNDCRQWV 313 (355)
Q Consensus 241 ~~~TrFlaL~k~~~~r~~l~a~~i~~~~-~~~~~~~d~~wl~i~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~~ 313 (355)
.++|+|+|||||+|+|+|+|+++++.++ +++.++||.|||||+|.|+.+.+.......+|.. + ...++++.|+
T Consensus 241 ~~~tkflaldKclp~~~flqile~~sdp~g~~~~eyd~ewlsi~~~tn~l~~~k~~~~~~p~~~~~r~e~~~~ep~~~~~ 320 (456)
T KOG2863|consen 241 SHVTKFLALDKCLPNRNFLQILEIPSDPRGPMNVEYDNEWLSILRETNFLILVKCRYRNRPNRDLCRLEILEKEPDLSHV 320 (456)
T ss_pred CCCcccccccccCCCcchhhhccCCCCCCCCcccchhhhHHHhhhccchhhhhhhhhhcCCcccchhhhccccCCccchh
Confidence 9999999999999999999999998876 8899999999999999999999998888877653 2 3456788888
Q ss_pred HHHhhhCCCCCccceEccCCCCCCCCCccCCCCCcCCCCCC
Q 018464 314 RSRLQERGAKPFEFVRTVPCYDASQSLSIGAFAVTAFFPQQ 354 (355)
Q Consensus 314 ~~~~~~~~~~~~~f~~t~~~~~~~~~~~~~~~~~~~~npq~ 354 (355)
...+......|+||.+|+++|++..+ ..|+..-.||||
T Consensus 321 ~~k~~~~l~~~~~~~~~~~~~~~~~p---~~~~~~~~~P~~ 358 (456)
T KOG2863|consen 321 SWKDENHLMVPDNFSRTNFVYDPKEP---IVQNLHSNNPQT 358 (456)
T ss_pred hhcchhhhcCCCccccceeeeccccc---cccccccCCCch
Confidence 88888888889999999999998876 356777889998
No 2
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=100.00 E-value=1.2e-72 Score=534.79 Aligned_cols=257 Identities=65% Similarity=1.196 Sum_probs=246.3
Q ss_pred EEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhcCCCCCCccEEEEc
Q 018464 3 IAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIG 82 (355)
Q Consensus 3 Ilv~GD~HG~ld~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~g~~~~p~pt~fI~ 82 (355)
|+|+||+||+++.+|++++.++++++.++|+|||||||+..++.+|+++|+||+||+.+++|++|++|++++|+|||||+
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~~t~fi~ 80 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEGTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGEKKAPILTIFIG 80 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcCCCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCCccCCeeEEEEC
Confidence 79999999999999999999999988899999999999999999999999999999999999999999999999999999
Q ss_pred CCCCChhhHHHHhhCCccCCceEEeCCceEEEEcCEEEEEecCcCCCcccCCCCCCCCCCChhhHhhhhhhhhHHHHHHh
Q 018464 83 GNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHKLM 162 (355)
Q Consensus 83 GNHE~~~~l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~~e~~py~~~~~rs~yh~re~dv~~L~ 162 (355)
||||+++++.++.+|||+++||+||++++|++++|+||+|+||+++..+|.+++++..||+++++||+||+|+.++++|.
T Consensus 81 GNHE~~~~l~~l~~gg~v~~Ni~~Lg~~~v~~~~GlrIaGLsG~~~~~~~~~~~~~~~~~t~~~~rs~y~~r~~~~~kl~ 160 (262)
T cd00844 81 GNHEASNYLWELPYGGWVAPNIYYLGYAGVVNFGGLRIAGLSGIYKSHDYRKGHFERPPYSEDTKRSAYHVRNIEVFKLK 160 (262)
T ss_pred CCCCCHHHHHhhcCCCeecCcEEEecCCCEEEECCeEEEEecccccccccccccccCCCCCHHHHHHhhhhhHHHHHHHH
Confidence 99999999999989999999999999999999999999999999999999888778899999999999999999999998
Q ss_pred ccCCCccEEEeCCCCCCCccCCcchhhhhhccchhhcccCCCCCcHHHHHHHHHhCCCEEEEeCCCCccceeeccC----
Q 018464 163 QIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVVQHG---- 238 (355)
Q Consensus 163 ~~~~~vDIllTHdwP~gi~~~g~~~~l~~~kp~f~~~~~~~~lGS~~l~~ll~~lkPrywfsgH~H~~f~a~~~~~---- 238 (355)
.+..++||||||+||+||.++++..+|+++||+|+++++..++||+++++|++++|||||||||+|++|++.++|.
T Consensus 161 ~~~~~vDIlLSHdWP~gI~~~~~~~~l~~~~~~~~~~~~~~~~Gs~~~~~ll~~lkPryhf~gH~H~~f~~~~~~~~~~~ 240 (262)
T cd00844 161 QLKQPIDIFLSHDWPRGIYKHGDKKQLLRKKPFFRQDIESGTLGSPAAEELLKHLKPRYWFSAHLHVKFAALVPHENKSP 240 (262)
T ss_pred hcCCCCcEEEeCCCCcchhhccchHHhhhcCccchhcccccCCCCHHHHHHHHHhCCCEEEEecCCcccceecCCccccc
Confidence 8878999999999999999999999999999999999998999999999999999999999999999999988774
Q ss_pred -CCCCeeEEEEccccCCCCCee
Q 018464 239 -EDSPVTKFLALDKCLPRRKFL 259 (355)
Q Consensus 239 -~~~~~TrFlaL~k~~~~r~~l 259 (355)
+..++|||||||||+|+|+||
T Consensus 241 ~~~~~~TRFiaL~k~~~~~~~~ 262 (262)
T cd00844 241 GNTNKETKFLALDKCLPGRDFL 262 (262)
T ss_pred CCCCcceEEEEcccccCCCCCC
Confidence 246799999999999999986
No 3
>KOG2476 consensus Uncharacterized conserved protein [Function unknown]
Probab=100.00 E-value=2.3e-39 Score=317.93 Aligned_cols=227 Identities=28% Similarity=0.479 Sum_probs=182.2
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhcCCCCCCccEEE
Q 018464 1 MRIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIF 80 (355)
Q Consensus 1 mkIlv~GD~HG~ld~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~g~~~~p~pt~f 80 (355)
.||||+||+.|+++.++++|+++++|+| +||+|||+|+|+..+.. ..+|.+|..|.+++|+||||
T Consensus 6 ~kILv~Gd~~Gr~~eli~rI~~v~Kk~G-pFd~liCvGnfF~~~~~--------------~~e~~~ykng~~~vPiptY~ 70 (528)
T KOG2476|consen 6 AKILVCGDVEGRFDELIKRIQKVNKKSG-PFDLLICVGNFFGHDTQ--------------NAEVEKYKNGTKKVPIPTYF 70 (528)
T ss_pred ceEEEEcCccccHHHHHHHHHHHhhcCC-CceEEEEecccCCCccc--------------hhHHHHHhcCCccCceeEEE
Confidence 3899999999999999999999999999 99999999999986432 34678999999999999999
Q ss_pred EcCCC-CChhhHHHHhhCCccCCceEEeCCceEEEE-cCEEEEEecCcCCCcccCCCCCCCCCCChhhHhhhhhhhhHHH
Q 018464 81 IGGNH-EASNYLWELYYGGWAAPNIYFLGFAGVVKF-GNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDV 158 (355)
Q Consensus 81 I~GNH-E~~~~l~el~~gg~va~NI~yLg~~gv~~i-~GlrIaGlsGi~~~~~y~~~~~e~~py~~~~~rs~yh~re~dv 158 (355)
.++|. +...|+ +..+|+++|+|++|||+.|+++. .|++||++||.+....+. .-|+..++.++.|- .+
T Consensus 71 ~g~~~~~~~ky~-~n~~g~Ei~~Nlt~Lg~~G~~~l~sGl~IaYLsG~e~~~~~~------~~fs~~dv~~l~~~--~~- 140 (528)
T KOG2476|consen 71 LGDNANETEKYF-ENSDGKEIAENLTYLGRKGTYKLASGLTIAYLSGPESSEKGE------SKFSQADVDELRHR--LD- 140 (528)
T ss_pred ecCCCCccceec-ccCCCcccccceeeecccceEeecCCcEEEEeeccccccccc------cccCHHHHHHHhcc--cc-
Confidence 99998 444444 44489999999999999999988 699999999998643221 13555555444331 11
Q ss_pred HHHhccCCCccEEEeCCCCCCCccC-CcchhhhhhccchhhcccCCCCCcHHHHHHHHHhCCCEEEEeCC--CCccceee
Q 018464 159 HKLMQIEEPIDIFLSHDWPCGITDY-GNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHL--HCKFAAVV 235 (355)
Q Consensus 159 ~~L~~~~~~vDIllTHdwP~gi~~~-g~~~~l~~~kp~f~~~~~~~~lGS~~l~~ll~~lkPrywfsgH~--H~~f~a~~ 235 (355)
......+||||||.+||.+|..+ +.. .+.....||..+++|+..+||||||+|.. |++.+++.
T Consensus 141 --~~~~~~gvDILlTseWP~~v~e~~ss~------------~~~~~~~gs~lvs~La~~lkPRYHFa~~~~v~YErePyr 206 (528)
T KOG2476|consen 141 --TQKEFKGVDILLTSEWPADVQERNSSL------------PESKRLCGSELVSELAAELKPRYHFAGSDGVFYEREPYR 206 (528)
T ss_pred --cccccCCccEEEecCCcchhhhccccC------------ccccCCcchHHHHHHHHhcCcceEeccCCCceeeccccc
Confidence 11335789999999999999874 211 12345689999999999999999999986 56666788
Q ss_pred cc----CCCCCeeEEEEccccCC--CCCeeEEEeccC
Q 018464 236 QH----GEDSPVTKFLALDKCLP--RRKFLQVFEIES 266 (355)
Q Consensus 236 ~~----~~~~~~TrFlaL~k~~~--~r~~l~a~~i~~ 266 (355)
+| .+.+++||||+|+++|+ ++||+|||++.|
T Consensus 207 n~~~~~~~~~h~TRFI~LA~vGN~ek~K~lYAfs~~P 243 (528)
T KOG2476|consen 207 NHAALNEEAGHVTRFIALAKVGNPEKQKWLYAFSLKP 243 (528)
T ss_pred chhhhcccccceeeeeehhhcCCccccceeeeecccc
Confidence 87 56778999999999996 569999999854
No 4
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=100.00 E-value=4.1e-38 Score=275.63 Aligned_cols=144 Identities=30% Similarity=0.545 Sum_probs=124.3
Q ss_pred EEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhcCCCCCCccEEEEcC
Q 018464 4 AVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGG 83 (355)
Q Consensus 4 lv~GD~HG~ld~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~g~~~~p~pt~fI~G 83 (355)
||+||+||+++++|++++++++|+| +||++|||||||+.++.. ++|.+|++|.+++|+||||++|
T Consensus 1 LV~G~~~G~l~~~~~kv~~~~~k~g-pFd~~ic~Gdff~~~~~~--------------~~~~~y~~g~~~~pipTyf~gg 65 (150)
T cd07380 1 LVCGDVNGRLKALFEKVNTINKKKG-PFDALLCVGDFFGDDEDD--------------EELEAYKDGSKKVPIPTYFLGG 65 (150)
T ss_pred CeeecCCccHHHHHHHHHHHhcccC-CeeEEEEecCccCCccch--------------hhHHHHhcCCccCCCCEEEECC
Confidence 6899999999999999999999887 999999999999987653 5789999999999999999999
Q ss_pred CCCChhhHHHHhhCCccCCceEEeCCceEEEEcCEEEEEecCcCCCcccCCCCCCCCCCChhhHhhhhhhhhHHHHHHhc
Q 018464 84 NHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHKLMQ 163 (355)
Q Consensus 84 NHE~~~~l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~~e~~py~~~~~rs~yh~re~dv~~L~~ 163 (355)
||+
T Consensus 66 n~~----------------------------------------------------------------------------- 68 (150)
T cd07380 66 NNP----------------------------------------------------------------------------- 68 (150)
T ss_pred CCC-----------------------------------------------------------------------------
Confidence 996
Q ss_pred cCCCccEEEeCCCCCCCccCCcchhhhhhccchhhcccCCCCCcHHHHHHHHHhCCCEEEEeCCCCccce--eeccC---
Q 018464 164 IEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAA--VVQHG--- 238 (355)
Q Consensus 164 ~~~~vDIllTHdwP~gi~~~g~~~~l~~~kp~f~~~~~~~~lGS~~l~~ll~~lkPrywfsgH~H~~f~a--~~~~~--- 238 (355)
++||||||+||.||.+.++... +......||+.+++|++++|||||||||.|..|++ +.|+.
T Consensus 69 ---~~DILlTh~wP~gi~~~~~~~~----------~~~~~~~GS~~i~~l~~~lkPrYhf~gh~~~fyer~Pf~~~~~~~ 135 (150)
T cd07380 69 ---GVDILLTSEWPKGISKLSKVPF----------EETLLICGSDLIAELAKKLKPRYHFAGLEGVFYEREPYRNDSVLE 135 (150)
T ss_pred ---CCCEEECCCCchhhhhhCCCcc----------cccccCCCCHHHHHHHHHcCCCeEeecCCCceEeecCccCCCccc
Confidence 3799999999999987665310 23446789999999999999999999999987775 55653
Q ss_pred -CCCCeeEEEEcccc
Q 018464 239 -EDSPVTKFLALDKC 252 (355)
Q Consensus 239 -~~~~~TrFlaL~k~ 252 (355)
+..++||||+|+++
T Consensus 136 ~~~~~~TRFi~La~~ 150 (150)
T cd07380 136 EKAEHVTRFIGLAPV 150 (150)
T ss_pred cccCcceeEEeccCC
Confidence 13679999999974
No 5
>PF05011 DBR1: Lariat debranching enzyme, C-terminal domain; InterPro: IPR007708 This presumed domain is found at the C terminus of lariat debranching enzyme. This domain is always found in association with a metallo-phosphoesterase domain IPR004843 from INTERPRO. RNA lariat debranching enzyme is capable of digesting a variety of branched nucleic acid substrates and multicopy single-stranded DNAs. The enzyme degrades intron lariat structures during splicing. ; GO: 0016788 hydrolase activity, acting on ester bonds, 0006397 mRNA processing
Probab=99.98 E-value=1.8e-32 Score=238.62 Aligned_cols=121 Identities=36% Similarity=0.545 Sum_probs=101.4
Q ss_pred eccCCCCCeeEEEEccccCCCCCeeEEEeccCCCCC--ceeeeChHHHHHHHhhCCCCCCCCCCCCCCCC-------CCC
Q 018464 235 VQHGEDSPVTKFLALDKCLPRRKFLQVFEIESGQGP--YEIQYDEEWLAITRTFNSVFPLTSQSANFGGV-------QHD 305 (355)
Q Consensus 235 ~~~~~~~~~TrFlaL~k~~~~r~~l~a~~i~~~~~~--~~~~~d~~wl~i~~~~~~~~~~~~~~~~~~~~-------~~~ 305 (355)
|+|+.+++.|||||||||+|+|+|||+++|+..... .+|+||+|||||+|+++++++++.....++.. +..
T Consensus 1 vph~~~~~~TkFLALDKClP~R~FLqviei~~~~~~~~~~L~yD~EWLAI~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (145)
T PF05011_consen 1 VPHEITNKTTKFLALDKCLPRRDFLQVIEIPPDSSSPSPELYYDPEWLAILRATHHLLSLSSDPEYMPPPDEGRWDYRPL 80 (145)
T ss_pred CCCCcCCCccEEEeccccCCCCcceEEEEecCCCCCCCceEEECHHHHHHHHHhhhccccccccccCCCccccccchhhh
Confidence 456567789999999999999999999999987554 89999999999999999999986665544432 345
Q ss_pred hHHHHHHHHHHhh--hCCCCCccceEccCCCCCCCCC-ccCCCCCcCCCCCCC
Q 018464 306 MNDCRQWVRSRLQ--ERGAKPFEFVRTVPCYDASQSL-SIGAFAVTAFFPQQL 355 (355)
Q Consensus 306 ~~~~~~~~~~~~~--~~~~~~~~f~~t~~~~~~~~~~-~~~~~~~~~~npq~~ 355 (355)
++++++||++++. .+..+|+||++|||+|+|+.+. ....+|.+|+||||.
T Consensus 81 i~ee~~~V~e~i~~~~~l~IP~nF~~tap~~~~~~~~~~~~~~~~~~~NPQT~ 133 (145)
T PF05011_consen 81 IEEELEWVEENIVKKGDLKIPQNFVQTAPPYDPNNPQNRVNEQPKEYPNPQTT 133 (145)
T ss_pred HHHHHHHHHHHhccCCCceeCcceEECCCCcCcCccccccccCCCCccChHHH
Confidence 7899999999994 4445799999999999998754 346789999999994
No 6
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=99.90 E-value=3e-22 Score=186.29 Aligned_cols=208 Identities=17% Similarity=0.233 Sum_probs=135.8
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCC-cchhhhccchhhHHhhhHHHHHhcCCCCCCccEE
Q 018464 1 MRIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRN-ENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTI 79 (355)
Q Consensus 1 mkIlv~GD~HG~ld~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~-~~dl~~~~~p~k~~~~~~f~~y~~g~~~~p~pt~ 79 (355)
|||++++|+||++.++-+.++.+.+ . .+|++|+|||+..... .+. ..+|.+.+ ...++|++
T Consensus 5 ~kIl~iSDiHgn~~~le~l~~~~~~-~--~~D~vv~~GDl~~~g~~~~~------------~~~~l~~l---~~l~~pv~ 66 (224)
T cd07388 5 RYVLATSNPKGDLEALEKLVGLAPE-T--GADAIVLIGNLLPKAAKSED------------YAAFFRIL---GEAHLPTF 66 (224)
T ss_pred eEEEEEEecCCCHHHHHHHHHHHhh-c--CCCEEEECCCCCCCCCCHHH------------HHHHHHHH---HhcCCceE
Confidence 7999999999999888766554432 2 6999999999987541 111 12233332 34567999
Q ss_pred EEcCCCCCh--hhHHHHhhCCccCCceEEeCCceEEEEcC-EEEEEecCcCCCcccCCCCCCCCCCChhhHhhh-hhhhh
Q 018464 80 FIGGNHEAS--NYLWELYYGGWAAPNIYFLGFAGVVKFGN-IRIGGLSGIYNARHYRLGHYERPPYNESTIRSV-YHVRE 155 (355)
Q Consensus 80 fI~GNHE~~--~~l~el~~gg~va~NI~yLg~~gv~~i~G-lrIaGlsGi~~~~~y~~~~~e~~py~~~~~rs~-yh~re 155 (355)
+|+||||.. ..+.+....+++.|++..|.. +++++.| ++|+|++|.... ...++++++... -...+
T Consensus 67 ~V~GNhD~~v~~~l~~~~~~~~~~p~~~~lh~-~~~~~~g~~~~~GlGGs~~~---------~~e~sE~e~~~~~~~~~~ 136 (224)
T cd07388 67 YVPGPQDAPLWEYLREAYNAELVHPEIRNVHE-TFAFWRGPYLVAGVGGEIAD---------EGEPEEHEALRYPAWVAE 136 (224)
T ss_pred EEcCCCChHHHHHHHHHhcccccCccceecCC-CeEEecCCeEEEEecCCcCC---------CCCcCHHHHhhhhhhHHH
Confidence 999999986 233332222345566655644 6778855 999999998631 122455542100 00011
Q ss_pred HHHHHHhccCCCccEEEeCCCCCCCccCCcchhhhhhccchhhcccCCCCCcHHHHHHHHHhCCCEEEEeCCCCccceee
Q 018464 156 YDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVV 235 (355)
Q Consensus 156 ~dv~~L~~~~~~vDIllTHdwP~gi~~~g~~~~l~~~kp~f~~~~~~~~lGS~~l~~ll~~lkPrywfsgH~H~~f~a~~ 235 (355)
.-+..+.......||||||.+|.|+-- .+.||+++++++++.+|++|+|||+|...+.
T Consensus 137 ~~l~~~~~~~~~~~VLv~H~PP~g~g~--------------------~h~GS~alr~~I~~~~P~l~i~GHih~~~~~-- 194 (224)
T cd07388 137 YRLKALWELKDYRKVFLFHTPPYHKGL--------------------NEQGSHEVAHLIKTHNPLVVLVGGKGQKHEL-- 194 (224)
T ss_pred HHHHHHHhCCCCCeEEEECCCCCCCCC--------------------CccCHHHHHHHHHHhCCCEEEEcCCceeEEE--
Confidence 222334444567999999999999721 3689999999999999999999999944432
Q ss_pred ccCCCCCeeEEEEccccCCCCCeeEEEecc
Q 018464 236 QHGEDSPVTKFLALDKCLPRRKFLQVFEIE 265 (355)
Q Consensus 236 ~~~~~~~~TrFlaL~k~~~~r~~l~a~~i~ 265 (355)
-..|..+|-+....+ +.-.+++.
T Consensus 195 -----~g~t~vvNpg~~~~g--~~a~i~~~ 217 (224)
T cd07388 195 -----LGASWVVVPGDLSEG--RYALLDLR 217 (224)
T ss_pred -----eCCEEEECCCcccCC--cEEEEEec
Confidence 235899998874444 23356654
No 7
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=99.87 E-value=5.1e-21 Score=169.85 Aligned_cols=187 Identities=18% Similarity=0.224 Sum_probs=121.3
Q ss_pred EEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhcCCCCCCccEEEEc
Q 018464 3 IAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIG 82 (355)
Q Consensus 3 Ilv~GD~HG~ld~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~g~~~~p~pt~fI~ 82 (355)
|+++||+||+..++.. ..+++ .++|+||++||+........ |..+ +. .+..++|+++|+
T Consensus 1 i~~~sD~H~~~~~~~~--~~~~~---~~~D~vv~~GDl~~~~~~~~---------~~~~----~~---l~~~~~p~~~v~ 59 (188)
T cd07392 1 ILAISDIHGDVEKLEA--IILKA---EEADAVIVAGDITNFGGKEA---------AVEI----NL---LLAIGVPVLAVP 59 (188)
T ss_pred CEEEEecCCCHHHHHH--HHhhc---cCCCEEEECCCccCcCCHHH---------HHHH----HH---HHhcCCCEEEEc
Confidence 7899999999877764 22222 27999999999986543221 1112 22 344678999999
Q ss_pred CCCCChhhHHHHhhCCccCCceEEeCCceEEEEcCEEEEEecCcCCCcccCCCCCCCCCCChhhHhhhhhhhhHHHHHHh
Q 018464 83 GNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHKLM 162 (355)
Q Consensus 83 GNHE~~~~l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~~e~~py~~~~~rs~yh~re~dv~~L~ 162 (355)
||||....... ..+++..+ +..++.++|++|.|++|.... .+. ....++++++..+ ..+.
T Consensus 60 GNHD~~~~~~~------~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~-~~~----~~~~~~~~~l~~~--------~~l~ 119 (188)
T cd07392 60 GNCDTPEILGL------LTSAGLNL-HGKVVEVGGYTFVGIGGSNPT-PFN----TPIELSEEEIVSD--------GRLN 119 (188)
T ss_pred CCCCCHHHHHh------hhcCcEec-CCCEEEECCEEEEEeCCCCCC-CCC----CccccCHHHHHHh--------hhhh
Confidence 99998654433 22344444 346778899999999986421 111 1123444444322 1233
Q ss_pred ccCCCccEEEeCCCCCCC-ccCCcchhhhhhccchhhcccCCCCCcHHHHHHHHHhCCCEEEEeCCCCccceeeccCCCC
Q 018464 163 QIEEPIDIFLSHDWPCGI-TDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVVQHGEDS 241 (355)
Q Consensus 163 ~~~~~vDIllTHdwP~gi-~~~g~~~~l~~~kp~f~~~~~~~~lGS~~l~~ll~~lkPrywfsgH~H~~f~a~~~~~~~~ 241 (355)
....+.+|++||.||.+. .+.-. .....|++.+.+++++.+|++|||||.|..+.....
T Consensus 120 ~~~~~~~ilv~H~pp~~~~~d~~~---------------~~~~~g~~~l~~li~~~~~~~~l~GH~H~~~~~~~~----- 179 (188)
T cd07392 120 NLLAKNLILVTHAPPYGTAVDRVS---------------GGFHVGSKAIRKFIEERQPLLCICGHIHESRGVDKI----- 179 (188)
T ss_pred ccCCCCeEEEECCCCcCCcccccC---------------CCCccCCHHHHHHHHHhCCcEEEEeccccccceeee-----
Confidence 445678999999999874 22110 012479999999999999999999999998854222
Q ss_pred CeeEEEEcc
Q 018464 242 PVTKFLALD 250 (355)
Q Consensus 242 ~~TrFlaL~ 250 (355)
..|.+++.+
T Consensus 180 ~~~~~~n~G 188 (188)
T cd07392 180 GNTLVVNPG 188 (188)
T ss_pred CCeEEecCC
Confidence 247777643
No 8
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=99.80 E-value=4.9e-18 Score=155.96 Aligned_cols=209 Identities=22% Similarity=0.294 Sum_probs=137.3
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCcc--ccCCcchhhhccchhhHHhhhHHHHHhcCCCCCCccE
Q 018464 1 MRIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQ--AVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPT 78 (355)
Q Consensus 1 mkIlv~GD~HG~ld~i~~~i~~~~~k~g~~~DllI~~GDf~--~~~~~~dl~~~~~p~k~~~~~~f~~y~~g~~~~p~pt 78 (355)
|||+.+.|+||+.+.+-+.+..... ..+|+|+++||+. ..++...... ++ .+ .-++...+|+
T Consensus 4 mkil~vtDlHg~~~~~~k~~~~~~~---~~~D~lviaGDlt~~~~~~~~~~~~--------~~-~~----e~l~~~~~~v 67 (226)
T COG2129 4 MKILAVTDLHGSEDSLKKLLNAAAD---IRADLLVIAGDLTYFHFGPKEVAEE--------LN-KL----EALKELGIPV 67 (226)
T ss_pred ceEEEEeccccchHHHHHHHHHHhh---ccCCEEEEecceehhhcCchHHHHh--------hh-HH----HHHHhcCCeE
Confidence 8999999999999877665544332 2799999999998 4443221110 00 01 1123457899
Q ss_pred EEEcCCCCChhhHHHHhhCCccCCceEEeCCceEEEEcCEEEEEecCcCCCcccCCCCCCCCCCChhhHhhhhhhhhHHH
Q 018464 79 IFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDV 158 (355)
Q Consensus 79 ~fI~GNHE~~~~l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~~e~~py~~~~~rs~yh~re~dv 158 (355)
++++||.|.......+...| -|+ +..+++++|+.|.|++|+.. ..|.+ ...|+++++.|. +
T Consensus 68 ~avpGNcD~~~v~~~l~~~~---~~v----~~~v~~i~~~~~~G~Ggsn~-tp~nt----~~e~~E~~I~s~-------l 128 (226)
T COG2129 68 LAVPGNCDPPEVIDVLKNAG---VNV----HGRVVEIGGYGFVGFGGSNP-TPFNT----PREFSEDEIYSK-------L 128 (226)
T ss_pred EEEcCCCChHHHHHHHHhcc---ccc----ccceEEecCcEEEEecccCC-CCCCC----ccccCHHHHHHH-------H
Confidence 99999999887666665433 233 23788999999999988753 33332 234566666543 1
Q ss_pred HHH-hccCCCccEEEeCCCCCCCccCCcchhhhhhccchhhcccCCCCCcHHHHHHHHHhCCCEEEEeCCCCccceeecc
Q 018464 159 HKL-MQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVVQH 237 (355)
Q Consensus 159 ~~L-~~~~~~vDIllTHdwP~gi~~~g~~~~l~~~kp~f~~~~~~~~lGS~~l~~ll~~lkPrywfsgH~H~~f~a~~~~ 237 (355)
.++ .......-|++||.+|.+...- . | ..-.++||..++++++++||+.++|||+|+...--.
T Consensus 129 ~~~v~~~~~~~~Il~~HaPP~gt~~d--~-------~-----~g~~hvGS~~vr~~ieefqP~l~i~GHIHEs~G~d~-- 192 (226)
T COG2129 129 KSLVKKADNPVNILLTHAPPYGTLLD--T-------P-----SGYVHVGSKAVRKLIEEFQPLLGLHGHIHESRGIDK-- 192 (226)
T ss_pred HHHHhcccCcceEEEecCCCCCcccc--C-------C-----CCccccchHHHHHHHHHhCCceEEEeeecccccccc--
Confidence 121 1222222299999999997642 1 0 012489999999999999999999999998554322
Q ss_pred CCCCCeeEEEEccccCCCCCeeEEEecc
Q 018464 238 GEDSPVTKFLALDKCLPRRKFLQVFEIE 265 (355)
Q Consensus 238 ~~~~~~TrFlaL~k~~~~r~~l~a~~i~ 265 (355)
-..|.|++-+. .++.....+++.
T Consensus 193 ---iG~TivVNPG~--~~~g~yA~i~l~ 215 (226)
T COG2129 193 ---IGNTIVVNPGP--LGEGRYALIELE 215 (226)
T ss_pred ---cCCeEEECCCC--ccCceEEEEEec
Confidence 23699999988 333334445554
No 9
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=99.71 E-value=2e-16 Score=145.36 Aligned_cols=211 Identities=18% Similarity=0.277 Sum_probs=122.8
Q ss_pred EEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCc-chhh----hccchhh--------HH--hhhHHHH
Q 018464 2 RIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNE-NDME----SLNVPRK--------YR--EMKSFWK 66 (355)
Q Consensus 2 kIlv~GD~HG~ld~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~-~dl~----~~~~p~k--------~~--~~~~f~~ 66 (355)
|||.++|.||+++.+-+.++.+.++ .+|+|+.+||+...... .|.. .-..|+| |. .+..|.+
T Consensus 7 kilA~s~~~g~~e~l~~l~~~~~e~---~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~~ff~ 83 (255)
T PF14582_consen 7 KILAISNFRGDFELLERLVEVIPEK---GPDAVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEECYDSEALDKFFR 83 (255)
T ss_dssp EEEEEE--TT-HHHHHHHHHHHHHH---T-SEEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHHHHHHHHHHHHH
T ss_pred hheeecCcchHHHHHHHHHhhcccc---CCCEEEEeccccccchhhhHHHHHhhhccCcchhhhhhhhhhhHHHHHHHHH
Confidence 7999999999999999888888776 58999999999533211 1111 0011211 11 1334444
Q ss_pred HhcCCCCCCccEEEEcCCCCCh--hhHHHHhhCCccCCceEEeCCceEEEEcC-EEEEEecCcCCCcccCCCCCCCCCCC
Q 018464 67 YYSGQEVAPIPTIFIGGNHEAS--NYLWELYYGGWAAPNIYFLGFAGVVKFGN-IRIGGLSGIYNARHYRLGHYERPPYN 143 (355)
Q Consensus 67 y~~g~~~~p~pt~fI~GNHE~~--~~l~el~~gg~va~NI~yLg~~gv~~i~G-lrIaGlsGi~~~~~y~~~~~e~~py~ 143 (355)
. +..+++||++||||||++ .++.+.+...-+.||++-+ +.+++.+.| +-|+|+||............-+.|+.
T Consensus 84 ~---L~~~~~p~~~vPG~~Dap~~~~lr~a~~~e~v~p~~~~v-H~sf~~~~g~y~v~G~GGeI~~~~~~~~~~LrYP~w 159 (255)
T PF14582_consen 84 I---LGELGVPVFVVPGNMDAPERFFLREAYNAEIVTPHIHNV-HESFFFWKGEYLVAGMGGEITDDQREEEFKLRYPAW 159 (255)
T ss_dssp H---HHCC-SEEEEE--TTS-SHHHHHHHHHHCCCC-TTEEE--CTCEEEETTTEEEEEE-SEEESSS-BCSSS-EEEHH
T ss_pred H---HHhcCCcEEEecCCCCchHHHHHHHHhccceeccceeee-eeeecccCCcEEEEecCccccCCCccccccccchHH
Confidence 4 466899999999999996 5577777777889999866 567788887 99999999875433221111123322
Q ss_pred hhhHhhhhhhhhHHHHHHhccCCCccEEEeCCCCCCCccCCcchhhhhhccchhhcccCCCCCcHHHHHHHHHhCCCEEE
Q 018464 144 ESTIRSVYHVREYDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWF 223 (355)
Q Consensus 144 ~~~~rs~yh~re~dv~~L~~~~~~vDIllTHdwP~gi~~~g~~~~l~~~kp~f~~~~~~~~lGS~~l~~ll~~lkPrywf 223 (355)
+ -++.++.|..++..--|||.|.+|. ..+ ...+.||..+++|+++.+|...+
T Consensus 160 e---------aey~lk~l~elk~~r~IlLfhtpPd----~~k---------------g~~h~GS~~V~dlIk~~~P~ivl 211 (255)
T PF14582_consen 160 E---------AEYSLKFLRELKDYRKILLFHTPPD----LHK---------------GLIHVGSAAVRDLIKTYNPDIVL 211 (255)
T ss_dssp H---------HHHHHGGGGGCTSSEEEEEESS-BT----BCT---------------CTBTTSBHHHHHHHHHH--SEEE
T ss_pred H---------HHHHHHHHHhcccccEEEEEecCCc----cCC---------------CcccccHHHHHHHHHhcCCcEEE
Confidence 1 1222333444556678999999991 111 12579999999999999999999
Q ss_pred EeCCCCccceeeccCCCCCeeEEEEcccc
Q 018464 224 SAHLHCKFAAVVQHGEDSPVTKFLALDKC 252 (355)
Q Consensus 224 sgH~H~~f~a~~~~~~~~~~TrFlaL~k~ 252 (355)
|||.|.+.+.-.-. .|-.++-+..
T Consensus 212 ~Ghihe~~~~e~lG-----~TlVVNPGsL 235 (255)
T PF14582_consen 212 CGHIHESHGKESLG-----KTLVVNPGSL 235 (255)
T ss_dssp E-SSS-EE--EEET-----TEEEEE--BG
T ss_pred ecccccchhhHHhC-----CEEEecCccc
Confidence 99999887543221 3666665554
No 10
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=99.64 E-value=3.2e-15 Score=140.06 Aligned_cols=211 Identities=20% Similarity=0.256 Sum_probs=118.0
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhcCCCCCCccEEE
Q 018464 1 MRIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIF 80 (355)
Q Consensus 1 mkIlv~GD~HG~ld~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~g~~~~p~pt~f 80 (355)
+||+++||+||++.... ++.+++ .++|++|++||+.... + ++.+.+ ...+.|+++
T Consensus 1 ~rIa~isDiHg~~~~~~--~~~l~~---~~pD~Vl~~GDi~~~~----~-------------~~~~~l---~~l~~p~~~ 55 (238)
T cd07397 1 LRIAIVGDVHGQWDLED--IKALHL---LQPDLVLFVGDFGNES----V-------------QLVRAI---SSLPLPKAV 55 (238)
T ss_pred CEEEEEecCCCCchHHH--HHHHhc---cCCCEEEECCCCCcCh----H-------------HHHHHH---HhCCCCeEE
Confidence 59999999999976522 233332 2689999999996321 1 112232 234678999
Q ss_pred EcCCCCChhhHHHHhhCCccCCceEEeCCc----eEEEEc--CEEEEEecCcCCCcccCCCCCCCCCCChhhHhhhhhhh
Q 018464 81 IGGNHEASNYLWELYYGGWAAPNIYFLGFA----GVVKFG--NIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVR 154 (355)
Q Consensus 81 I~GNHE~~~~l~el~~gg~va~NI~yLg~~----gv~~i~--GlrIaGlsGi~~~~~y~~~~~e~~py~~~~~rs~yh~r 154 (355)
|.||||.-..........++.+.+..+|.. +.+++. ++.|.|.=|-..+..+. .+...+|..|.+.
T Consensus 56 V~GNHD~~~~~~~~~k~~~l~~~L~~lg~~~l~~~~~~~~~~~~~vvG~R~~~~~g~~~--------~~~~~vr~~fgi~ 127 (238)
T cd07397 56 ILGNHDAWYDATFRKKGDRVQEQLELLGDLHCGWGRLDFPPLPLSVVGGRPFSAGGGFW--------LSKKAVKAVYGVI 127 (238)
T ss_pred EcCCCcccccccccchHHHHHHHHHHhCCcEEeecccccCCCCeEEEeeCCccCCCccc--------cCHHHHHHHhCCC
Confidence 999999632100000001111222222211 223443 56666644432222111 2344677777543
Q ss_pred hHH------HHHHhc-cCCCccEEEeCCCCCCCccCCcchhhhhhccchhhc-ccCCCCCcHHHHHHHHHhC----CCEE
Q 018464 155 EYD------VHKLMQ-IEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKE-IQDGTLGSEPAAQLLEKLK----PSYW 222 (355)
Q Consensus 155 e~d------v~~L~~-~~~~vDIllTHdwP~gi~~~g~~~~l~~~kp~f~~~-~~~~~lGS~~l~~ll~~lk----Pryw 222 (355)
..+ ++++.. .....+|||||..|.|.-+..+- +.=++- ......|.+-+++.+..++ |+|+
T Consensus 128 s~~eA~~~ive~~~~~~~~~~~VliaH~~~~G~g~~~~~-------~cg~d~~~~~~~~G~~~l~~ai~~~~~~~~~~l~ 200 (238)
T cd07397 128 SLEESAQRIIAAAKKAPPDLPLILLAHNGPSGLGSDAED-------PCGRDWKPPGGDWGDPDLALAISQIQQGRQVPLV 200 (238)
T ss_pred CHHHHHHHHHHHhhhcCCCCCeEEEeCcCCcCCCccccc-------ccccccCCcCCCCCCHHHHHHHHHHhccCCCCEE
Confidence 332 233322 23467999999999998542110 000000 1135789999999999888 8999
Q ss_pred EEeCCCCc--cceee---ccCCCCCeeEEEEcccc
Q 018464 223 FSAHLHCK--FAAVV---QHGEDSPVTKFLALDKC 252 (355)
Q Consensus 223 fsgH~H~~--f~a~~---~~~~~~~~TrFlaL~k~ 252 (355)
++||+|.. +..-. .+ .+...|.|||-+.+
T Consensus 201 ~fGH~H~~l~~~~~~r~~~~-~~~~gt~y~N~a~~ 234 (238)
T cd07397 201 VFGHMHHRLRRGKGLRNMIA-VDREGTVYLNAASV 234 (238)
T ss_pred EeCCccCcccccccccceee-ecCCCeEEEecccc
Confidence 99999977 44310 01 11246999998765
No 11
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=99.56 E-value=5.6e-14 Score=119.97 Aligned_cols=134 Identities=23% Similarity=0.367 Sum_probs=92.7
Q ss_pred EEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhcCCCCCCcc-EEE
Q 018464 2 RIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIP-TIF 80 (355)
Q Consensus 2 kIlv~GD~HG~ld~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~g~~~~p~p-t~f 80 (355)
||+++||+||... .+ ...++|++|+|||+....... +...+.+++... +.+ +++
T Consensus 1 ~i~~isD~H~~~~----~~------~~~~~D~vi~~GD~~~~~~~~------------~~~~~~~~l~~~---~~~~~~~ 55 (135)
T cd07379 1 RFVCISDTHSRHR----TI------SIPDGDVLIHAGDLTERGTLE------------ELQKFLDWLKSL---PHPHKIV 55 (135)
T ss_pred CEEEEeCCCCCCC----cC------cCCCCCEEEECCCCCCCCCHH------------HHHHHHHHHHhC---CCCeEEE
Confidence 6999999999976 11 112699999999997543221 123344454332 233 578
Q ss_pred EcCCCCChhhHHHHhhCCccCCceEEeCCceEEEEcCEEEEEecCcCCCcccCCCCCCCCCCChhhHhhhhhhhhHHHHH
Q 018464 81 IGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHK 160 (355)
Q Consensus 81 I~GNHE~~~~l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~~e~~py~~~~~rs~yh~re~dv~~ 160 (355)
|.||||....
T Consensus 56 v~GNHD~~~~---------------------------------------------------------------------- 65 (135)
T cd07379 56 IAGNHDLTLD---------------------------------------------------------------------- 65 (135)
T ss_pred EECCCCCcCC----------------------------------------------------------------------
Confidence 9999984200
Q ss_pred HhccCCCccEEEeCCCCCCCccCCcchhhhhhccchhhcccCCCCCcHHHHHHHHHhCCCEEEEeCCCCccceeeccCCC
Q 018464 161 LMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVVQHGED 240 (355)
Q Consensus 161 L~~~~~~vDIllTHdwP~gi~~~g~~~~l~~~kp~f~~~~~~~~lGS~~l~~ll~~lkPrywfsgH~H~~f~a~~~~~~~ 240 (355)
..+++|++||.+|.++.++... ....|++.+.+++++.+|+++|+||.|..+.....+ ..
T Consensus 66 ----~~~~~ilv~H~~p~~~~~~~~~---------------~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~~~~~~~-~~ 125 (135)
T cd07379 66 ----PEDTDILVTHGPPYGHLDLVSS---------------GQRVGCEELLNRVQRVRPKLHVFGHIHEGYGAERVL-DT 125 (135)
T ss_pred ----CCCCEEEEECCCCCcCcccccc---------------CcccCCHHHHHHHHHHCCcEEEEcCcCCcCceeEec-cc
Confidence 0246999999999887654321 246899999999999999999999999998664213 22
Q ss_pred CCeeEEEEcc
Q 018464 241 SPVTKFLALD 250 (355)
Q Consensus 241 ~~~TrFlaL~ 250 (355)
...|.+|+.+
T Consensus 126 ~~~t~~in~~ 135 (135)
T cd07379 126 DGETLFVNAS 135 (135)
T ss_pred CCCEEEEeCC
Confidence 3468998753
No 12
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=99.48 E-value=7.5e-13 Score=123.74 Aligned_cols=208 Identities=21% Similarity=0.226 Sum_probs=112.6
Q ss_pred EEEEEcCCCCChHH------HHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhcCCCCCC
Q 018464 2 RIAVEGCMHGELDN------VYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAP 75 (355)
Q Consensus 2 kIlv~GD~HG~ld~------i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~g~~~~p 75 (355)
||++++|+|++... +.+.++.+++. ++|+||++||+..... . .+..+..+.+. ..
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~---~~d~vv~~GDl~~~~~-~---------~~~~~~~l~~~------~~ 61 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQ---KIDHLHIAGDISNDFQ-R---------SLPFIEKLQEL------KG 61 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhc---CCCEEEECCccccchh-h---------HHHHHHHHHHh------cC
Confidence 79999999976421 22233334332 5999999999985421 1 11112222221 35
Q ss_pred ccEEEEcCCCCCh-h-hHHHHhhCCccCCceEEeCCceEE-EEcCEEEEEecCcCCCcccCC----------------CC
Q 018464 76 IPTIFIGGNHEAS-N-YLWELYYGGWAAPNIYFLGFAGVV-KFGNIRIGGLSGIYNARHYRL----------------GH 136 (355)
Q Consensus 76 ~pt~fI~GNHE~~-~-~l~el~~gg~va~NI~yLg~~gv~-~i~GlrIaGlsGi~~~~~y~~----------------~~ 136 (355)
+|+++|+||||.. . ...++.. .. ++.+|....+. ..+++||.|+.|.+.. .+.. ..
T Consensus 62 ~pv~~v~GNHD~~~~~~~~~~~~--~~--~~~~l~~~~~~~~~~~~~~ig~~gw~d~-~~~~~~~~~~~~~~~~d~~~~~ 136 (239)
T TIGR03729 62 IKVTFNAGNHDMLKDLTYEEIES--ND--SPLYLHNRFIDIPNTQWRIIGNNGWYDY-SFSNDKTSKEILRWKKSFWFDR 136 (239)
T ss_pred CcEEEECCCCCCCCCCCHHHHHh--cc--chhhhcccccccCCCceEEEeeccceec-ccccccCHHHHHHhhhcEEeec
Confidence 7999999999963 1 1122211 01 34445444432 2388999999985531 1100 00
Q ss_pred CCCCCCChhhHhhhhhhhhHH-H-HHHhccCCCccEEEeCCCCCCCcc-CCcchhhhhhccchhhcccCCCCCcHHHHHH
Q 018464 137 YERPPYNESTIRSVYHVREYD-V-HKLMQIEEPIDIFLSHDWPCGITD-YGNCKELVRHKQYFEKEIQDGTLGSEPAAQL 213 (355)
Q Consensus 137 ~e~~py~~~~~rs~yh~re~d-v-~~L~~~~~~vDIllTHdwP~gi~~-~g~~~~l~~~kp~f~~~~~~~~lGS~~l~~l 213 (355)
....|.....+ +-++.+ + +.|.+...+.-|++||-+|..... .+.. .+.+ .......||..+.++
T Consensus 137 ~~~~~~~~~~~----~~~~l~~l~~~l~~~~~~~~ivvtH~pP~~~~~~~~~~------~~~~--~~~~~~~~s~~l~~l 204 (239)
T TIGR03729 137 RIKRPMSDPER----TAIVLKQLKKQLNQLDNKQVIFVTHFVPHRDFIYVPMD------HRRF--DMFNAFLGSQHFGQL 204 (239)
T ss_pred ccCCCCChHHH----HHHHHHHHHHHHHhcCCCCEEEEEcccchHHHhcCCCC------Ccch--hhhhhccChHHHHHH
Confidence 00112221111 111111 1 223334446689999999964211 0000 0001 001235789999999
Q ss_pred HHHhCCCEEEEeCCCCccceeeccCCCCCeeEEEEcc
Q 018464 214 LEKLKPSYWFSAHLHCKFAAVVQHGEDSPVTKFLALD 250 (355)
Q Consensus 214 l~~lkPrywfsgH~H~~f~a~~~~~~~~~~TrFlaL~ 250 (355)
+++.+|++|||||.|..+..... ..||+++-.
T Consensus 205 i~~~~v~~~i~GH~H~~~~~~~i-----~~~~~~~~~ 236 (239)
T TIGR03729 205 LVKYEIKDVIFGHLHRRFGPLTI-----GGTTYHNRP 236 (239)
T ss_pred HHHhCCCEEEECCccCCCCCEEE-----CCEEEEecC
Confidence 99999999999999999853221 258888643
No 13
>KOG3947 consensus Phosphoesterases [General function prediction only]
Probab=99.46 E-value=3.9e-13 Score=126.36 Aligned_cols=207 Identities=23% Similarity=0.324 Sum_probs=134.0
Q ss_pred EEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhcCCCCCCc-cEEE
Q 018464 2 RIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPI-PTIF 80 (355)
Q Consensus 2 kIlv~GD~HG~ld~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~g~~~~p~-pt~f 80 (355)
|..+++|+|+....+- .+ ..-|++|.+|||.+..-.. ++..|-+++ -+.|. --++
T Consensus 63 r~VcisdtH~~~~~i~-~~--------p~gDvlihagdfT~~g~~~------------ev~~fn~~~---gslph~yKIV 118 (305)
T KOG3947|consen 63 RFVCISDTHELTFDIN-DI--------PDGDVLIHAGDFTNLGLPE------------EVIKFNEWL---GSLPHEYKIV 118 (305)
T ss_pred EEEEecCcccccCccc-cC--------CCCceEEeccCCccccCHH------------HHHhhhHHh---ccCcceeeEE
Confidence 6789999999876554 22 2579999999998765333 233444443 12232 2689
Q ss_pred EcCCCCCh---hhHH---H-----Hh-----------hCC--ccCCceEEeCCceEEEEcCEEEEEecCcCCCcccCCCC
Q 018464 81 IGGNHEAS---NYLW---E-----LY-----------YGG--WAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGH 136 (355)
Q Consensus 81 I~GNHE~~---~~l~---e-----l~-----------~gg--~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~ 136 (355)
|.||||.. +.+. . ++ ++| .+-.|+.||-+.. +++.|+||-|.+-. +.
T Consensus 119 IaGNHELtFd~ef~~~~~k~~~~~~~~p~~s~l~P~a~egv~~lLTN~iYLqD~~-vtv~G~~Iygspw~--p~------ 189 (305)
T KOG3947|consen 119 IAGNHELTFDHEFMADLIKDEQDAYYFPGVSKLKPEAYEGVQSLLTNCIYLQDSE-VTVRGVRIYGSPWT--PL------ 189 (305)
T ss_pred EeeccceeecccccchhhccccceecCccccccCccccccccchhceeEEEecCc-EEEEEEEEecCCCC--cc------
Confidence 99999875 1111 1 00 111 2567889998887 47788999875432 10
Q ss_pred CCCCCCChhhHhhhhhhhhHHHHHHhccCCCccEEEeCCCCCCCccCCcchhhhhhccchhhcccCCCCCcHH-HHHHHH
Q 018464 137 YERPPYNESTIRSVYHVREYDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEP-AAQLLE 215 (355)
Q Consensus 137 ~e~~py~~~~~rs~yh~re~dv~~L~~~~~~vDIllTHdwP~gi~~~g~~~~l~~~kp~f~~~~~~~~lGS~~-l~~ll~ 215 (355)
+..++|... .++...++..++...+|||+||.+|.|. ++.-+ .| +..+.|+.. +..+-.
T Consensus 190 ~~g~~f~l~-------rg~~~ld~W~~ip~~iDvL~tHtPPlG~---gd~~~------~~----~gqr~GC~ell~tVe~ 249 (305)
T KOG3947|consen 190 LPGWAFNLP-------RGQSLLDKWNQIPGGIDVLITHTPPLGH---GDLVP------VF----SGQRNGCVELLNTVER 249 (305)
T ss_pred cCchhhhhh-------hhHhhhHHHhcCccccceeccCCCCCCc---chhcc------cc----cCcccCHHHHHHhHhh
Confidence 011222211 2456677888999999999999999994 44311 01 234678764 555556
Q ss_pred HhCCCEEEEeCCCCccceeeccCCCCCeeEEEEccccCC----CCCeeEEEeccCC
Q 018464 216 KLKPSYWFSAHLHCKFAAVVQHGEDSPVTKFLALDKCLP----RRKFLQVFEIESG 267 (355)
Q Consensus 216 ~lkPrywfsgH~H~~f~a~~~~~~~~~~TrFlaL~k~~~----~r~~l~a~~i~~~ 267 (355)
.+||+||++||.|..|..+-. ..|+|++-.-|.- ..+=+ +|+|+..
T Consensus 250 rvqpk~hVfGhvhe~~Gvta~-----G~t~fina~~C~~~~~~t~~pi-lfdip~~ 299 (305)
T KOG3947|consen 250 RVQPKYHVFGHVHEGHGVTAD-----GYTTFINAELCNINLRPTNKPI-LFDIPKP 299 (305)
T ss_pred ccccceEEeeeeecCceeeec-----CccccccHHHhhhccccCCCCe-EEeCCCC
Confidence 699999999999999888764 2699998888862 22222 7777654
No 14
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.46 E-value=3.7e-13 Score=112.67 Aligned_cols=189 Identities=22% Similarity=0.281 Sum_probs=98.0
Q ss_pred CEEEEEcCCCCChHHH---HHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhcCCCCCCcc
Q 018464 1 MRIAVEGCMHGELDNV---YKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIP 77 (355)
Q Consensus 1 mkIlv~GD~HG~ld~i---~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~g~~~~p~p 77 (355)
|||+++||+|+..... ...+.....+ .+.|+||++||+.......+... ..+. ........++|
T Consensus 1 ~ri~~isD~H~~~~~~~~~~~~~~~~~~~--~~~d~ii~~GD~~~~~~~~~~~~----------~~~~-~~~~~~~~~~~ 67 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDSDAFRKLDEIAAE--NKPDFIIFLGDLVDGGNPSEEWR----------AQFW-FFIRLLNPKIP 67 (200)
T ss_dssp EEEEEEEBBTTTHHHHCHHHHHHHHHHHH--TTTSEEEEESTSSSSSSHHHHHH----------HHHH-HHHHHHHTTTT
T ss_pred CeEEEEcCCCCCCcchhHHHHHHHHHhcc--CCCCEEEeeccccccccccccch----------hhhc-cchhhhhcccc
Confidence 8999999999998876 3333333333 36999999999987665433211 1110 01112335789
Q ss_pred EEEEcCCCCChhhHHHHhh-----C-CccCCceEEeCCce-EE-EEcCEEEEEecCcCCCcccCCCCCCCCCCChhhHhh
Q 018464 78 TIFIGGNHEASNYLWELYY-----G-GWAAPNIYFLGFAG-VV-KFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRS 149 (355)
Q Consensus 78 t~fI~GNHE~~~~l~el~~-----g-g~va~NI~yLg~~g-v~-~i~GlrIaGlsGi~~~~~y~~~~~e~~py~~~~~rs 149 (355)
++++.||||.......... . .....+..+....+ .. ............... .........
T Consensus 68 ~~~~~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~ 135 (200)
T PF00149_consen 68 VYFILGNHDYYSGNSFYGFYDYQFEDYYGNYNYYYSYFNNKVIFDNDNFWFNSGNNEYP------------DYGMEAQQE 135 (200)
T ss_dssp EEEEE-TTSSHHHHHHHHHHHHHHSSEEECSSEEECTESSEEEEEETTEEEEEHCCHTH------------HSEHHHHHH
T ss_pred ccccccccccceeccccccccccccccccccccccccCcceeeeccccccccccccccc------------ccccccchh
Confidence 9999999999854322211 0 00111111111000 00 011111111111000 000000000
Q ss_pred hhhhhhHHHHHHhccCCCccEEEeCCCCCCCccCCcchhhhhhccchhhcccCCCCCcHHHHHHHHHhCCCEEEEeCCCC
Q 018464 150 VYHVREYDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHC 229 (355)
Q Consensus 150 ~yh~re~dv~~L~~~~~~vDIllTHdwP~gi~~~g~~~~l~~~kp~f~~~~~~~~lGS~~l~~ll~~lkPrywfsgH~H~ 229 (355)
........+........|+++|.+|.......... .....++..+..+++..++.++|+||.|.
T Consensus 136 ---~~~~~~~~~~~~~~~~~iv~~H~p~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~v~~~~~GH~H~ 199 (200)
T PF00149_consen 136 ---WWLWLLLLLEAKNDDPVIVFTHHPPYSSSSDSSSY-------------GNESKGREALEELLKKYNVDLVLSGHTHR 199 (200)
T ss_dssp ---HHHHHHHHHHEEEESEEEEEESSSSSTTSSSTHHH-------------SSEEEHHHHHHHHHHHTTCSEEEEESSSS
T ss_pred ---cccccccccccccccceeEEEecCCCCcccccccc-------------chhhccHHHHHHHHhhCCCCEEEeCceec
Confidence 01111112223345789999999999876533210 01134567899999999999999999996
Q ss_pred c
Q 018464 230 K 230 (355)
Q Consensus 230 ~ 230 (355)
.
T Consensus 200 ~ 200 (200)
T PF00149_consen 200 Y 200 (200)
T ss_dssp E
T ss_pred C
Confidence 3
No 15
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=99.46 E-value=5e-12 Score=117.10 Aligned_cols=196 Identities=16% Similarity=0.206 Sum_probs=114.4
Q ss_pred EEEEEcCCCCCh------------HHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhc
Q 018464 2 RIAVEGCMHGEL------------DNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYS 69 (355)
Q Consensus 2 kIlv~GD~HG~l------------d~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~ 69 (355)
||++++|+|=.- ..+-+.++.+++... ++|+||++||+....... .|+. |.+.+
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~-~~d~vi~~GDl~~~~~~~---------~~~~---~~~~l- 66 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHP-RPDLVLVTGDLTDDGSPE---------SYER---LRELL- 66 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCC-CCCEEEECccCCCCCCHH---------HHHH---HHHHH-
Confidence 799999999432 234444555554432 799999999998654321 2222 23332
Q ss_pred CCCCCCccEEEEcCCCCChhhHHHHhhCCccCCceEEeCCceEEEEcCEEEEEecCcCCCcccCCCCCCCCCCChhhHhh
Q 018464 70 GQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRS 149 (355)
Q Consensus 70 g~~~~p~pt~fI~GNHE~~~~l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~~e~~py~~~~~rs 149 (355)
.+.++|+++|+||||....+.+.. +.+-..+ -...-++.++|++|.++.+...... ...+++.+++.
T Consensus 67 --~~~~~p~~~v~GNHD~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~i~lds~~~~~~-------~~~~~~~ql~w 133 (240)
T cd07402 67 --AALPIPVYLLPGNHDDRAAMRAVF-PELPPAP---GFVQYVVDLGGWRLILLDSSVPGQH-------GGELCAAQLDW 133 (240)
T ss_pred --hhcCCCEEEeCCCCCCHHHHHHhh-ccccccc---cccceeEecCCEEEEEEeCCCCCCc-------CCEECHHHHHH
Confidence 234789999999999865443322 1110001 0112356779999999977542110 01122333222
Q ss_pred hhhhhhHHHHHHhccCCCccEEEeCCCCCCCcc-CCcchhhhhhccchhhcccCCCCCcHHHHHHHHHh-CCCEEEEeCC
Q 018464 150 VYHVREYDVHKLMQIEEPIDIFLSHDWPCGITD-YGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKL-KPSYWFSAHL 227 (355)
Q Consensus 150 ~yh~re~dv~~L~~~~~~vDIllTHdwP~gi~~-~g~~~~l~~~kp~f~~~~~~~~lGS~~l~~ll~~l-kPrywfsgH~ 227 (355)
+ + +.|.+.....-|+++|.+|..... ..+ .....++..+.+++.+. +++++||||.
T Consensus 134 L---~----~~L~~~~~~~~il~~H~pp~~~~~~~~~---------------~~~~~~~~~~~~~l~~~~~v~~v~~GH~ 191 (240)
T cd07402 134 L---E----AALAEAPDKPTLVFLHHPPFPVGIAWMD---------------AIGLRNAEALAAVLARHPNVRAILCGHV 191 (240)
T ss_pred H---H----HHHHhCCCCCEEEEECCCCccCCchhhh---------------hhhCCCHHHHHHHHhcCCCeeEEEECCc
Confidence 2 1 123333346789999999977532 111 01234577888999988 8899999999
Q ss_pred CCccceeeccCCCCCeeEEEEcccc
Q 018464 228 HCKFAAVVQHGEDSPVTKFLALDKC 252 (355)
Q Consensus 228 H~~f~a~~~~~~~~~~TrFlaL~k~ 252 (355)
|..+...+. .+.++..+..
T Consensus 192 H~~~~~~~~------g~~~~~~gs~ 210 (240)
T cd07402 192 HRPIDGSWG------GIPLLTAPST 210 (240)
T ss_pred CchHHeEEC------CEEEEEcCcc
Confidence 986555442 3566655553
No 16
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=99.37 E-value=4.5e-12 Score=111.58 Aligned_cols=153 Identities=18% Similarity=0.170 Sum_probs=88.3
Q ss_pred EEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhcCCCCCCccEEEEc
Q 018464 3 IAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIG 82 (355)
Q Consensus 3 Ilv~GD~HG~ld~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~g~~~~p~pt~fI~ 82 (355)
|+++||+|++.......+. ......++|+||++||+........ +..+ ......+.|+++|.
T Consensus 1 ~~~iSDlH~~~~~~~~~~~--~~~~~~~~d~li~~GDi~~~~~~~~---------------~~~~-~~~~~~~~~v~~v~ 62 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLL--NFPIAPDADILVLAGDIGYLTDAPR---------------FAPL-LLALKGFEPVIYVP 62 (166)
T ss_pred CceEccccccCcccccccc--ccCCCCCCCEEEECCCCCCCcchHH---------------HHHH-HHhhcCCccEEEeC
Confidence 6899999998765433221 1112237999999999986542211 0111 11234578999999
Q ss_pred CCCCChhhHHHHhhCCccCCceEEeCCceEEEEcCEEEEEecCcCCCcccCCCCCCCCCCChhhHhhhhhhhhHHHHHHh
Q 018464 83 GNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHKLM 162 (355)
Q Consensus 83 GNHE~~~~l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~~e~~py~~~~~rs~yh~re~dv~~L~ 162 (355)
||||.. ++|.|..+=+ +| .+++++. ++.+.
T Consensus 63 GNHD~~-----------------------------~~~~G~~~w~---~~-------~~~~~~~-----------~~~~~ 92 (166)
T cd07404 63 GNHEFY-----------------------------VRIIGTTLWS---DI-------SLFGEAA-----------ARMRM 92 (166)
T ss_pred CCcceE-----------------------------EEEEeeeccc---cc-------CccchHH-----------HHhCC
Confidence 999864 4555553211 11 1122211 11111
Q ss_pred ccCCCccEEEeCCCCCCCccCC-cchhhhhhccchhhcccCCCCCcHHHHHHHHHhCCCEEEEeCCCCccceee
Q 018464 163 QIEEPIDIFLSHDWPCGITDYG-NCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVV 235 (355)
Q Consensus 163 ~~~~~vDIllTHdwP~gi~~~g-~~~~l~~~kp~f~~~~~~~~lGS~~l~~ll~~lkPrywfsgH~H~~f~a~~ 235 (355)
.-..+..|++||-+|....... +.. . .....++..+.++++..++++|||||.|.......
T Consensus 93 ~d~~~~~vv~~HhpP~~~~~~~~~~~-----------~-~~~~~~~~~l~~~~~~~~v~~~i~GH~H~~~~~~~ 154 (166)
T cd07404 93 NDFRGKTVVVTHHAPSPLSLAPQYGD-----------S-LVNAAFAVDLDDLILADPIDLWIHGHTHFNFDYRI 154 (166)
T ss_pred CCCCCCEEEEeCCCCCccccCccccC-----------C-CcchhhhhccHhHHhhcCCCEEEECCccccceEEE
Confidence 1123578999999997653210 100 0 00123455677888888999999999998875543
No 17
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=99.31 E-value=1.5e-11 Score=104.86 Aligned_cols=67 Identities=21% Similarity=0.356 Sum_probs=48.9
Q ss_pred ccEEEeCCCCCCCccCCcchhhhhhccchhhcccCCCCCcHHHHHHHHHhCCCEEEEeCCCCccceeeccCCCCCeeEEE
Q 018464 168 IDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVVQHGEDSPVTKFL 247 (355)
Q Consensus 168 vDIllTHdwP~gi~~~g~~~~l~~~kp~f~~~~~~~~lGS~~l~~ll~~lkPrywfsgH~H~~f~a~~~~~~~~~~TrFl 247 (355)
++|+++|.||.++....+ ....|++.+.+++.+.+|+++++||.|..+..... ...-..|+++
T Consensus 57 ~~Ilv~H~pp~~~~~~~~----------------~~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~~~~~-~~~~~~t~~~ 119 (129)
T cd07403 57 VDILLTHAPPAGIGDGED----------------FAHRGFEAFLDFIDRFRPKLFIHGHTHLNYGYQLR-IRRVGDTTVI 119 (129)
T ss_pred cCEEEECCCCCcCcCccc----------------ccccCHHHHHHHHHHHCCcEEEEcCcCCCcCcccc-ccccCCEEEE
Confidence 389999999987654211 13468899999999999999999999988775510 0112369999
Q ss_pred Eccc
Q 018464 248 ALDK 251 (355)
Q Consensus 248 aL~k 251 (355)
+.+-
T Consensus 120 n~~~ 123 (129)
T cd07403 120 NAYG 123 (129)
T ss_pred eCCc
Confidence 8765
No 18
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=99.28 E-value=4.4e-11 Score=102.83 Aligned_cols=149 Identities=19% Similarity=0.250 Sum_probs=89.4
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhcCCCCCCccEEE
Q 018464 1 MRIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIF 80 (355)
Q Consensus 1 mkIlv~GD~HG~ld~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~g~~~~p~pt~f 80 (355)
|||+++||+|++.+.+-+.++.+ + ++|++|++||+... .++.+.++. + ++++
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~---~--~~d~vi~~GDi~~~------------------~~~~~~~~~---~--~~~~ 52 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYI---N--EPDFVIILGDIFDP------------------EEVLELLRD---I--PVYV 52 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHH---T--TESEEEEES-SCSH------------------HHHHHHHHH---H--EEEE
T ss_pred CEEEEEeCCCCChhHHHHHHHHh---c--CCCEEEECCCchhH------------------HHHHHHHhc---C--CEEE
Confidence 99999999999998866655554 1 59999999998652 112233221 2 8999
Q ss_pred EcCCCCChhhHHHHhhCCccCCceEEeCCceEEEEcCEEEEEecCcCCCcccCCCCCCCCCCChhhHhhhhhhhhHHHHH
Q 018464 81 IGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHK 160 (355)
Q Consensus 81 I~GNHE~~~~l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~~e~~py~~~~~rs~yh~re~dv~~ 160 (355)
|.||||...+ .+.. .... +...-..+
T Consensus 53 v~GNHD~~~~-~~~~-~~~~------~~~~~~~~---------------------------------------------- 78 (156)
T PF12850_consen 53 VRGNHDNWAF-PNEN-DEEY------LLDALRLT---------------------------------------------- 78 (156)
T ss_dssp E--CCHSTHH-HSEE-CTCS------SHSEEEEE----------------------------------------------
T ss_pred EeCCcccccc-hhhh-hccc------cccceeee----------------------------------------------
Confidence 9999996541 1110 0000 00000000
Q ss_pred HhccCCCccEEEeCCCCCCCccCCcchhhhhhccchhhcccCCCCCcHHHHHHHHHhCCCEEEEeCCCCccceeeccCCC
Q 018464 161 LMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVVQHGED 240 (355)
Q Consensus 161 L~~~~~~vDIllTHdwP~gi~~~g~~~~l~~~kp~f~~~~~~~~lGS~~l~~ll~~lkPrywfsgH~H~~f~a~~~~~~~ 240 (355)
.....|+++|.-|..+. .+...+.+++...+++++|+||.|..+.....
T Consensus 79 ----~~~~~i~~~H~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~~~---- 127 (156)
T PF12850_consen 79 ----IDGFKILLSHGHPYDVQ-----------------------WDPAELREILSRENVDLVLHGHTHRPQVFKIG---- 127 (156)
T ss_dssp ----ETTEEEEEESSTSSSST-----------------------TTHHHHHHHHHHTTSSEEEESSSSSEEEEEET----
T ss_pred ----ecCCeEEEECCCCcccc-----------------------cChhhhhhhhcccCCCEEEcCCcccceEEEEC----
Confidence 12568888888776643 12345678888999999999999998775532
Q ss_pred CCeeEEEEccccCCC----CCeeEEEec
Q 018464 241 SPVTKFLALDKCLPR----RKFLQVFEI 264 (355)
Q Consensus 241 ~~~TrFlaL~k~~~~----r~~l~a~~i 264 (355)
.+.+++.+.+... ++-.-++++
T Consensus 128 --~~~~~~~Gs~~~~~~~~~~~~~i~~~ 153 (156)
T PF12850_consen 128 --GIHVINPGSIGGPRHGDQSGYAILDI 153 (156)
T ss_dssp --TEEEEEE-GSSS-SSSSSEEEEEEEE
T ss_pred --CEEEEECCcCCCCCCCCCCEEEEEEE
Confidence 4899999887631 334444544
No 19
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=99.21 E-value=1.3e-09 Score=103.93 Aligned_cols=183 Identities=17% Similarity=0.190 Sum_probs=97.6
Q ss_pred CEEEEEcCCCC-C-----------hHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHh
Q 018464 1 MRIAVEGCMHG-E-----------LDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYY 68 (355)
Q Consensus 1 mkIlv~GD~HG-~-----------ld~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~ 68 (355)
|||+.++|+|= . .+.+-+.|+.+++.. .++|+||++||+...... ..| ..|.+.+
T Consensus 15 ~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~-~~~D~vvitGDl~~~~~~---------~~~---~~~~~~l 81 (275)
T PRK11148 15 VRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQ-HEFDLIVATGDLAQDHSS---------EAY---QHFAEGI 81 (275)
T ss_pred EEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhC-CCCCEEEECCCCCCCCCH---------HHH---HHHHHHH
Confidence 79999999992 1 233444455554432 369999999999764322 122 2333333
Q ss_pred cCCCCCCccEEEEcCCCCChhhHHHHhhCCccCCceEEeCCceEEEEcCEEEEEecCcCCCcccCCCCCCCCCCChhhHh
Q 018464 69 SGQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIR 148 (355)
Q Consensus 69 ~g~~~~p~pt~fI~GNHE~~~~l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~~e~~py~~~~~r 148 (355)
.+.++|+|+|+||||....+.+.....-+.++ ..++.-++.++.++........ .-.+..+++.
T Consensus 82 ---~~l~~Pv~~v~GNHD~~~~~~~~~~~~~~~~~------~~~~~~~~~~~i~Lds~~~g~~-------~G~l~~~ql~ 145 (275)
T PRK11148 82 ---APLRKPCVWLPGNHDFQPAMYSALQDAGISPA------KHVLIGEHWQILLLDSQVFGVP-------HGELSEYQLE 145 (275)
T ss_pred ---hhcCCcEEEeCCCCCChHHHHHHHhhcCCCcc------ceEEecCCEEEEEecCCCCCCc-------CCEeCHHHHH
Confidence 34568999999999985444333221111111 1122235677877765432110 0112333332
Q ss_pred hhhhhhhHHHHHHhccCCCccEEEeCCCCCCCcc-CCcchhhhhhccchhhcccCCCCCcHHHHHHHHHh-CCCEEEEeC
Q 018464 149 SVYHVREYDVHKLMQIEEPIDIFLSHDWPCGITD-YGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKL-KPSYWFSAH 226 (355)
Q Consensus 149 s~yh~re~dv~~L~~~~~~vDIllTHdwP~gi~~-~g~~~~l~~~kp~f~~~~~~~~lGS~~l~~ll~~l-kPrywfsgH 226 (355)
-+ + +.|.+...+.-|++.|-.|-.... ..+. .....+..+.+++++. +.+.+||||
T Consensus 146 wL----~---~~L~~~~~~~~vv~~hH~P~~~~~~~~d~---------------~~l~n~~~l~~ll~~~~~v~~vl~GH 203 (275)
T PRK11148 146 WL----E---RKLADAPERHTLVLLHHHPLPAGCAWLDQ---------------HSLRNAHELAEVLAKFPNVKAILCGH 203 (275)
T ss_pred HH----H---HHHhhCCCCCeEEEEcCCCCCCCcchhhc---------------cCCCCHHHHHHHHhcCCCceEEEecc
Confidence 22 1 123333333335555544432211 1110 0123567788999886 789999999
Q ss_pred CCCcccee
Q 018464 227 LHCKFAAV 234 (355)
Q Consensus 227 ~H~~f~a~ 234 (355)
.|..+...
T Consensus 204 ~H~~~~~~ 211 (275)
T PRK11148 204 IHQELDLD 211 (275)
T ss_pred cChHHhce
Confidence 99876543
No 20
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=99.17 E-value=1.2e-09 Score=94.91 Aligned_cols=59 Identities=27% Similarity=0.413 Sum_probs=42.6
Q ss_pred EEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhcCCCCCCccEEEE
Q 018464 2 RIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFI 81 (355)
Q Consensus 2 kIlv~GD~HG~ld~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~g~~~~p~pt~fI 81 (355)
||+++||+||+.+.+.+.++.+ . .+|.+|+|||+........ .....++++|
T Consensus 1 ~i~~isD~H~~~~~~~~~~~~~----~-~~d~ii~~GD~~~~~~~~~-----------------------~~~~~~~~~V 52 (155)
T cd00841 1 KIGVISDTHGSLELLEKALELF----G-DVDLIIHAGDVLYPGPLNE-----------------------LELKAPVIAV 52 (155)
T ss_pred CEEEEecCCCCHHHHHHHHHHh----c-CCCEEEECCccccccccch-----------------------hhcCCcEEEE
Confidence 7999999999987666555443 2 3899999999876542110 1124579999
Q ss_pred cCCCCCh
Q 018464 82 GGNHEAS 88 (355)
Q Consensus 82 ~GNHE~~ 88 (355)
.||||..
T Consensus 53 ~GNhD~~ 59 (155)
T cd00841 53 RGNCDGE 59 (155)
T ss_pred eCCCCCc
Confidence 9999965
No 21
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=99.16 E-value=3.4e-09 Score=100.79 Aligned_cols=106 Identities=17% Similarity=0.187 Sum_probs=61.2
Q ss_pred CEEEEEcCCC-CC------------hHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHH
Q 018464 1 MRIAVEGCMH-GE------------LDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKY 67 (355)
Q Consensus 1 mkIlv~GD~H-G~------------ld~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y 67 (355)
.||++++|+| +. .+.+-+.++.+++. ++|+||++||+....... -+++...+.+.
T Consensus 1 ~r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~---~~d~vv~~GDlv~~~~~~---------~~~~~~~~~~~ 68 (267)
T cd07396 1 FRFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRE---SLDFVVQLGDIIDGDNAR---------AEEALDAVLAI 68 (267)
T ss_pred CeEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcC---CCCEEEECCCeecCCCch---------HHHHHHHHHHH
Confidence 4899999999 21 23344445555443 599999999997544321 01223344444
Q ss_pred hcCCCCCCccEEEEcCCCCChhhHHHHhh--CCccCCceEEeCCceEEEEcCEEEEEecCc
Q 018464 68 YSGQEVAPIPTIFIGGNHEASNYLWELYY--GGWAAPNIYFLGFAGVVKFGNIRIGGLSGI 126 (355)
Q Consensus 68 ~~g~~~~p~pt~fI~GNHE~~~~l~el~~--gg~va~NI~yLg~~gv~~i~GlrIaGlsGi 126 (355)
++ ..++|+++++||||.......... ..+.-+.-| -.++.+|.|+.++.+.
T Consensus 69 l~---~l~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~y-----ysf~~~~~~~i~lds~ 121 (267)
T cd07396 69 LD---RLKGPVHHVLGNHDLYNPSREYLLLYTLLGLGAPY-----YSFSPGGIRFIVLDGY 121 (267)
T ss_pred HH---hcCCCEEEecCccccccccHhhhhcccccCCCCce-----EEEecCCcEEEEEeCC
Confidence 43 346899999999997643222110 000001111 2345688899888764
No 22
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=99.15 E-value=2.5e-09 Score=99.85 Aligned_cols=182 Identities=19% Similarity=0.162 Sum_probs=93.1
Q ss_pred EEEEcCCCCCh---------H----HHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhc
Q 018464 3 IAVEGCMHGEL---------D----NVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYS 69 (355)
Q Consensus 3 Ilv~GD~HG~l---------d----~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~ 69 (355)
|.+++|+|-.. . +..+++...-++.-.++|+||++||+....... +.....+++
T Consensus 1 ~~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~~~~~------------~~~~~l~~l- 67 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWAMKLE------------EAKLDLAWI- 67 (232)
T ss_pred CeEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccCCChH------------HHHHHHHHH-
Confidence 56889999551 1 222333222122112799999999997322111 111122232
Q ss_pred CCCCCCccEEEEcCCCCCh----hhHHHHhhCCccCCceEEeCCceEEEEcCEEEEEecCcCCC-cccCCCCCCCCCCCh
Q 018464 70 GQEVAPIPTIFIGGNHEAS----NYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNA-RHYRLGHYERPPYNE 144 (355)
Q Consensus 70 g~~~~p~pt~fI~GNHE~~----~~l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~-~~y~~~~~e~~py~~ 144 (355)
+..+.|+|+|+||||.. ..+.+.. .++..++.....+.+++++|.|+.+-... ..+........+...
T Consensus 68 --~~l~~~v~~V~GNHD~~~~~~~~~~~~l-----~~~~~~~~~n~~~~~~~i~i~G~~~~~~~~~~~~~~~~~~~~~~~ 140 (232)
T cd07393 68 --DALPGTKVLLKGNHDYWWGSASKLRKAL-----EESRLALLFNNAYIDDDVAICGTRGWDNPGNPWPPINETLKVEED 140 (232)
T ss_pred --HhCCCCeEEEeCCccccCCCHHHHHHHH-----HhcCeEEeccCcEEECCEEEEEEEeeCCCCCccccccccccchhH
Confidence 22356799999999952 2222221 12222333345667899999998642211 110000000000000
Q ss_pred hhHhhhhhhhhHHHHH----HhccC----CCccEEEeCCCCCCCccCCcchhhhhhccchhhcccCCCCCcHHHHHHHHH
Q 018464 145 STIRSVYHVREYDVHK----LMQIE----EPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEK 216 (355)
Q Consensus 145 ~~~rs~yh~re~dv~~----L~~~~----~~vDIllTHdwP~gi~~~g~~~~l~~~kp~f~~~~~~~~lGS~~l~~ll~~ 216 (355)
. ++.+.++.. |.... .++-|+++|.+|.... .++..+.+++++
T Consensus 141 ~------~~~~~~l~~l~~~L~~~~~~~~~~~~i~~~H~p~~~~~-----------------------~~~~~~~~~~~~ 191 (232)
T cd07393 141 E------KIFERELERLELSLKAAKKREKEKIKIVMLHYPPANEN-----------------------GDDSPISKLIEE 191 (232)
T ss_pred H------HHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCcCCC-----------------------CCHHHHHHHHHH
Confidence 0 001111111 22221 1357999999986542 134456788888
Q ss_pred hCCCEEEEeCCCCccce
Q 018464 217 LKPSYWFSAHLHCKFAA 233 (355)
Q Consensus 217 lkPrywfsgH~H~~f~a 233 (355)
.+.++.|+||.|.....
T Consensus 192 ~~v~~vl~GH~H~~~~~ 208 (232)
T cd07393 192 YGVDICVYGHLHGVGRD 208 (232)
T ss_pred cCCCEEEECCCCCCccc
Confidence 89999999999977543
No 23
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=99.14 E-value=1.2e-09 Score=95.75 Aligned_cols=64 Identities=25% Similarity=0.400 Sum_probs=42.5
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhcCCCCCCccEEE
Q 018464 1 MRIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIF 80 (355)
Q Consensus 1 mkIlv~GD~HG~ld~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~g~~~~p~pt~f 80 (355)
|||+++||+||+...+-..++.++ ... ++|++|+|||+... + +.+++ ++...|+++
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~-~~~-~~d~ii~~GD~~~~----~---------------~~~~l---~~~~~~~~~ 56 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFN-LES-NVDLVIHAGDLTSP----F---------------VLKEF---EDLAAKVIA 56 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHh-hcc-CCCEEEEcCCCCCH----H---------------HHHHH---HHhCCceEE
Confidence 999999999999865443333333 221 59999999998721 0 11222 122447999
Q ss_pred EcCCCCCh
Q 018464 81 IGGNHEAS 88 (355)
Q Consensus 81 I~GNHE~~ 88 (355)
|.||||..
T Consensus 57 V~GN~D~~ 64 (158)
T TIGR00040 57 VRGNNDGE 64 (158)
T ss_pred EccCCCch
Confidence 99999963
No 24
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=99.10 E-value=1.3e-09 Score=99.84 Aligned_cols=104 Identities=20% Similarity=0.194 Sum_probs=59.2
Q ss_pred CEEEEEcCCCCChH----HHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhcCCCCCCc
Q 018464 1 MRIAVEGCMHGELD----NVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPI 76 (355)
Q Consensus 1 mkIlv~GD~HG~ld----~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~g~~~~p~ 76 (355)
|||++++|+|.+.. .+.+.++.+++ .++|++|++||++....... ..+.++++.. ..++
T Consensus 2 ~~i~~~sDlH~~~~~~~~~~~~~~~~~~~---~~~d~vl~~GD~~~~~~~~~-------------~~~~~~l~~l-~~~~ 64 (223)
T cd07385 2 LRIAHLSDLHLGPFVSRERLERLVEKINA---LKPDLVVLTGDLVDGSVDVL-------------ELLLELLKKL-KAPL 64 (223)
T ss_pred CEEEEEeecCCCccCCHHHHHHHHHHHhc---cCCCEEEEcCcccCCcchhh-------------HHHHHHHhcc-CCCC
Confidence 89999999998643 33333443333 25899999999986543221 1223333332 3468
Q ss_pred cEEEEcCCCCChhhHHHHhhCCccCCceEEeCCceE-EEEcCEEEE
Q 018464 77 PTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGV-VKFGNIRIG 121 (355)
Q Consensus 77 pt~fI~GNHE~~~~l~el~~gg~va~NI~yLg~~gv-~~i~GlrIa 121 (355)
|++++.||||...........---..++.+|....+ ++.+|.+|.
T Consensus 65 ~v~~v~GNHD~~~~~~~~~~~~l~~~~v~~L~~~~~~~~~~~~~i~ 110 (223)
T cd07385 65 GVYAVLGNHDYYSGDEENWIEALESAGITVLRNESVEISVGGATIG 110 (223)
T ss_pred CEEEECCCcccccCchHHHHHHHHHcCCEEeecCcEEeccCCeEEE
Confidence 999999999976332211000001235566655443 345665554
No 25
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=99.08 E-value=1.2e-09 Score=89.25 Aligned_cols=119 Identities=27% Similarity=0.273 Sum_probs=80.7
Q ss_pred EEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhcCCCCCCccEEEEcC
Q 018464 4 AVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGG 83 (355)
Q Consensus 4 lv~GD~HG~ld~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~g~~~~p~pt~fI~G 83 (355)
+++||+|+.............. ...+.|+||++||+............ . + ......+.+|++++.|
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~-~~~~~~~vi~~GD~~~~~~~~~~~~~---------~-~---~~~~~~~~~~~~~~~G 66 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALA-AAEKPDFVLVLGDLVGDGPDPEEVLA---------A-A---LALLLLLGIPVYVVPG 66 (131)
T ss_pred CeeecccCCccchHHHHHHHHh-cccCCCEEEECCcccCCCCCchHHHH---------H-H---HHHhhcCCCCEEEeCC
Confidence 4789999998776654311122 22378999999999876544322111 0 0 1223557899999999
Q ss_pred CCCChhhHHHHhhCCccCCceEEeCCceEEEEcCEEEEEecCcCCCcccCCCCCCCCCCChhhHhhhhhhhhHHHHHHhc
Q 018464 84 NHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHKLMQ 163 (355)
Q Consensus 84 NHE~~~~l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~~e~~py~~~~~rs~yh~re~dv~~L~~ 163 (355)
|||
T Consensus 67 NHD----------------------------------------------------------------------------- 69 (131)
T cd00838 67 NHD----------------------------------------------------------------------------- 69 (131)
T ss_pred Cce-----------------------------------------------------------------------------
Confidence 998
Q ss_pred cCCCccEEEeCCCCCCCccCCcchhhhhhccchhhcccCCCCCcHHHHHHHHHhCCCEEEEeCCCCcccee
Q 018464 164 IEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAV 234 (355)
Q Consensus 164 ~~~~vDIllTHdwP~gi~~~g~~~~l~~~kp~f~~~~~~~~lGS~~l~~ll~~lkPrywfsgH~H~~f~a~ 234 (355)
|+++|.+|......... ....+......++...+|.++|+||.|......
T Consensus 70 ------i~~~H~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~ 119 (131)
T cd00838 70 ------ILLTHGPPYDPLDELSP---------------DEDPGSEALLELLEKYGVDLVLSGHTHVYERRE 119 (131)
T ss_pred ------EEEeccCCCCCchhhcc---------------cchhhHHHHHHHHHHhCCCEEEeCCeecccccc
Confidence 77888888665543211 011256788999999999999999999877554
No 26
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=99.07 E-value=2.2e-09 Score=100.60 Aligned_cols=113 Identities=19% Similarity=0.158 Sum_probs=65.7
Q ss_pred CEEEEEcCCCCChH--HHHHH-HHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhcCCCCCCcc
Q 018464 1 MRIAVEGCMHGELD--NVYKT-LQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIP 77 (355)
Q Consensus 1 mkIlv~GD~HG~ld--~i~~~-i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~g~~~~p~p 77 (355)
|||++++|+|.... .+.+. ++.+.... .++|+|+++||++..+...+.. ++...++.++++. ..+.+++
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~~-~~~d~l~i~GDl~d~~~g~~~~----~~~~~~~~~~l~~---l~~~g~~ 72 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRGEA-RQADALYILGDLFEAWIGDDDP----SPFAREIAAALKA---LSDSGVP 72 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHhhh-ccCCEEEEccceeccccccCcC----CHHHHHHHHHHHH---HHHcCCe
Confidence 99999999996432 22221 22222221 2699999999998654322210 1112233333333 3344689
Q ss_pred EEEEcCCCCChhhHHHHhhCCccCCceEEeCCceEEEEcCEEEEEecCc
Q 018464 78 TIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGI 126 (355)
Q Consensus 78 t~fI~GNHE~~~~l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi 126 (355)
+++|.||||.... ..... ..++..+....+++++|.||.-..|-
T Consensus 73 v~~v~GNHD~~~~-~~~~~----~~g~~~l~~~~~~~~~g~~i~l~HGd 116 (241)
T PRK05340 73 CYFMHGNRDFLLG-KRFAK----AAGMTLLPDPSVIDLYGQRVLLLHGD 116 (241)
T ss_pred EEEEeCCCchhhh-HHHHH----hCCCEEeCCcEEEEECCEEEEEECCc
Confidence 9999999995311 01100 13345566667788899999887774
No 27
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=99.05 E-value=3e-09 Score=91.09 Aligned_cols=50 Identities=18% Similarity=0.177 Sum_probs=37.2
Q ss_pred EEEeCCCCCCCccCCcchhhhhhccchhhcccCCCCCcHHHHHHHHHhCCCEEEEeCCCCccceee
Q 018464 170 IFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVV 235 (355)
Q Consensus 170 IllTHdwP~gi~~~g~~~~l~~~kp~f~~~~~~~~lGS~~l~~ll~~lkPrywfsgH~H~~f~a~~ 235 (355)
|+++|-+|......... ...+...+.+++++.++++++|||.|..+....
T Consensus 81 iv~~Hhp~~~~~~~~~~----------------~~~~~~~~~~~l~~~~~~~~l~GH~H~~~~~~~ 130 (144)
T cd07400 81 IVVLHHPLVPPPGSGRE----------------RLLDAGDALKLLAEAGVDLVLHGHKHVPYVGNI 130 (144)
T ss_pred EEEecCCCCCCCccccc----------------cCCCHHHHHHHHHHcCCCEEEECCCCCcCeeec
Confidence 88889888776432110 112677889999999999999999998876553
No 28
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=98.95 E-value=9.5e-09 Score=98.21 Aligned_cols=189 Identities=19% Similarity=0.173 Sum_probs=99.0
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhcCCCCCCccEEE
Q 018464 1 MRIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIF 80 (355)
Q Consensus 1 mkIlv~GD~HG~ld~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~g~~~~p~pt~f 80 (355)
.|++|+||.|.....-.+.+.++.+. ..++|+||++||+......... .+...|.+.++.. ...+|+++
T Consensus 5 ~~f~v~gD~~~~~~~~~~~~~~l~~~-~~~~d~vl~~GDl~~~~~~~~~---------~~~~~~~~~~~~~-~~~~P~~~ 73 (294)
T cd00839 5 FKFAVFGDMGQNTNNSTNTLDHLEKE-LGNYDAILHVGDLAYADGYNNG---------SRWDTFMRQIEPL-ASYVPYMV 73 (294)
T ss_pred EEEEEEEECCCCCCCcHHHHHHHHhc-cCCccEEEEcCchhhhcCCccc---------hhHHHHHHHHHHH-HhcCCcEE
Confidence 38999999995322222334444443 2379999999999743221100 0112233333221 13579999
Q ss_pred EcCCCCChhhHHHHhh------------CCccCCceEEeCCceEEEEcCEEEEEecCcCCCcccCCCCCCCCCCChhhHh
Q 018464 81 IGGNHEASNYLWELYY------------GGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIR 148 (355)
Q Consensus 81 I~GNHE~~~~l~el~~------------gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~~e~~py~~~~~r 148 (355)
++||||.......... +....++.|| .+.+++++|.+|....... . .....++++
T Consensus 74 ~~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y-----sf~~g~v~fi~Lds~~~~~---~-----~~~~~~q~~ 140 (294)
T cd00839 74 TPGNHEADYNFSFYKIKAFFPRFRFPHSPSGSTSNLWY-----SFDVGPVHFVSLSTEVDFY---G-----DGPGSPQYD 140 (294)
T ss_pred cCcccccccCCCCcccccccccccccCCCCCCCCCceE-----EEeeCCEEEEEEecccccc---c-----CCCCcHHHH
Confidence 9999997532111000 0011123333 3567899999987653210 0 011122222
Q ss_pred hhhhhhhHHHHHHhccCCCccEEEeCCCCCCCccCCcchhhhhhccchhhcccCCCCCcHHHHHHHHHhCCCEEEEeCCC
Q 018464 149 SVYHVREYDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLH 228 (355)
Q Consensus 149 s~yh~re~dv~~L~~~~~~vDIllTHdwP~gi~~~g~~~~l~~~kp~f~~~~~~~~lGS~~l~~ll~~lkPrywfsgH~H 228 (355)
-+ +.++.+......+.-|+++|.++.......+.. .........+.+|+++.+...+|+||.|
T Consensus 141 WL----~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~-------------~~~~~~~~~l~~ll~~~~v~~vl~GH~H 203 (294)
T cd00839 141 WL----EADLAKVDRSKTPWIIVMGHRPMYCSNTDHDDC-------------IEGEKMRAALEDLFYKYGVDLVLSGHVH 203 (294)
T ss_pred HH----HHHHHHhcccCCCeEEEEeccCcEecCcccccc-------------chhHHHHHHHHHHHHHhCCCEEEEccce
Confidence 22 112221111112457899998886543221100 0012344568889999999999999999
Q ss_pred Cc
Q 018464 229 CK 230 (355)
Q Consensus 229 ~~ 230 (355)
..
T Consensus 204 ~y 205 (294)
T cd00839 204 AY 205 (294)
T ss_pred ee
Confidence 53
No 29
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=98.94 E-value=3.8e-09 Score=96.19 Aligned_cols=183 Identities=17% Similarity=0.173 Sum_probs=93.2
Q ss_pred EEEEEcCCCCCh-----------HHHHHHHHHHHHh-cCCCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhc
Q 018464 2 RIAVEGCMHGEL-----------DNVYKTLQYMENI-NSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYS 69 (355)
Q Consensus 2 kIlv~GD~HG~l-----------d~i~~~i~~~~~k-~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~ 69 (355)
||+.++|+|=.. +..++.++++.+. ...++|+||++||++...... .+.+..+.+++.
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~~----------~~~~~~~~~~~~ 70 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNPS----------PEALELLIEALR 70 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCCC----------HHHHHHHHHHHH
Confidence 799999999331 1122222222211 112699999999998754321 112223334433
Q ss_pred CCCCCCccEEEEcCCCCChhhHHHHhhCCccCCceEEeC----Cce--EE--EEcCEEEEEecCcCCCcccCCCCCCCCC
Q 018464 70 GQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLG----FAG--VV--KFGNIRIGGLSGIYNARHYRLGHYERPP 141 (355)
Q Consensus 70 g~~~~p~pt~fI~GNHE~~~~l~el~~gg~va~NI~yLg----~~g--v~--~i~GlrIaGlsGi~~~~~y~~~~~e~~p 141 (355)
....+.+|+++|.||||............ ...++..++ ... .. ..+++.|.|++...+..
T Consensus 71 ~~~~~~~~v~~~~GNHD~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~g~~~~~~~~----------- 138 (223)
T cd00840 71 RLKEAGIPVFIIAGNHDSPSRLGALSPLL-ALSGLHLVGVEEDVLTPLLLPKGGTGVAIYGLPYLRRSR----------- 138 (223)
T ss_pred HHHHCCCCEEEecCCCCCccccccccchH-hhCcEEEEcccCcceeEEEeccCCeEEEEEECCCCCHHH-----------
Confidence 33335789999999999875432211111 122333321 111 11 12456777765332100
Q ss_pred CChhhHhhhhhhhhHHHHHHhccCCCccEEEeCCCCCCCccCCcchhhhhhccchhhcccCCCCCcHHHHHHHHHhCCCE
Q 018464 142 YNESTIRSVYHVREYDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSY 221 (355)
Q Consensus 142 y~~~~~rs~yh~re~dv~~L~~~~~~vDIllTHdwP~gi~~~g~~~~l~~~kp~f~~~~~~~~lGS~~l~~ll~~lkPry 221 (355)
... .+ ...+..........+-|+++|....+...... ...+.....+...+..|
T Consensus 139 --~~~--~~---~~~~~~~~~~~~~~~~Il~~H~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~d~ 192 (223)
T cd00840 139 --LRD--LL---ADAELRPRPLDPDDFNILLLHGGVAGAGPSDS-------------------ERAPFVPEALLPAGFDY 192 (223)
T ss_pred --HHH--HH---HHHHHHhhccCCCCcEEEEEeeeeecCCCCcc-------------------cccccCcHhhcCcCCCE
Confidence 000 00 00000111122456789999998877653210 00223334456678899
Q ss_pred EEEeCCCCccc
Q 018464 222 WFSAHLHCKFA 232 (355)
Q Consensus 222 wfsgH~H~~f~ 232 (355)
+++||+|....
T Consensus 193 v~~GH~H~~~~ 203 (223)
T cd00840 193 VALGHIHRPQI 203 (223)
T ss_pred EECCCcccCee
Confidence 99999997754
No 30
>PRK04036 DNA polymerase II small subunit; Validated
Probab=98.92 E-value=5.3e-08 Score=100.92 Aligned_cols=126 Identities=17% Similarity=0.223 Sum_probs=74.4
Q ss_pred CEEEEEcCCC-CCh----HHHHHHHHHHHHhc------CCCccEEEEecCccccCC--cchhhhccchhhHHhhhHHHHH
Q 018464 1 MRIAVEGCMH-GEL----DNVYKTLQYMENIN------SYKIDLLLCCGDFQAVRN--ENDMESLNVPRKYREMKSFWKY 67 (355)
Q Consensus 1 mkIlv~GD~H-G~l----d~i~~~i~~~~~k~------g~~~DllI~~GDf~~~~~--~~dl~~~~~p~k~~~~~~f~~y 67 (355)
++|++++|+| |.- +.+...++.++... ..++|.||++||+..... ..+...+..+.-+..+..+.++
T Consensus 244 ~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l~~~ 323 (504)
T PRK04036 244 VYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAAAEY 323 (504)
T ss_pred cEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHHHHH
Confidence 5899999999 542 11222233333110 126899999999986421 1111112223334444455555
Q ss_pred hcCCCCCCccEEEEcCCCCChhhH------HHHhhCCccCCceEEeCCceEEEEcCEEEEEecCcC
Q 018464 68 YSGQEVAPIPTIFIGGNHEASNYL------WELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIY 127 (355)
Q Consensus 68 ~~g~~~~p~pt~fI~GNHE~~~~l------~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~ 127 (355)
++... ..+++++|+||||..... .+.+..-.-..|+.++.+-..++++|.+|.+.+|..
T Consensus 324 L~~L~-~~i~V~~ipGNHD~~~~~lPQ~~l~~~l~~~l~~~~v~~lsNP~~i~l~G~~iLl~HG~~ 388 (504)
T PRK04036 324 LKQIP-EDIKIIISPGNHDAVRQAEPQPAFPEEIRSLFPEHNVTFVSNPALVNLHGVDVLIYHGRS 388 (504)
T ss_pred HHhhh-cCCeEEEecCCCcchhhccCCCCccHHHHHhcCcCCeEEecCCeEEEECCEEEEEECCCC
Confidence 54443 468999999999976421 001101011258999988777889999999999864
No 31
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=98.89 E-value=1.2e-07 Score=88.48 Aligned_cols=111 Identities=14% Similarity=0.114 Sum_probs=66.1
Q ss_pred EEEEcCCCCChH---HHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhcCCCCCCccEE
Q 018464 3 IAVEGCMHGELD---NVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTI 79 (355)
Q Consensus 3 Ilv~GD~HG~ld---~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~g~~~~p~pt~ 79 (355)
+++++|+|.... .....++.+++... ++|+||++||++..+...+. .+.-+.++.++.+.+ .+.++++|
T Consensus 1 ~~~iSDlHl~~~~~~~~~~~l~~l~~~~~-~~d~lii~GDi~d~~~~~~~----~~~~~~~~~~~l~~L---~~~~~~v~ 72 (231)
T TIGR01854 1 TLFISDLHLSPERPDITALFLDFLREEAR-KADALYILGDLFEAWIGDDD----PSTLARSVAQAIRQV---SDQGVPCY 72 (231)
T ss_pred CeEEEecCCCCCChhHHHHHHHHHHhhhc-cCCEEEEcCceeccccCCCC----CCHHHHHHHHHHHHH---HHCCCeEE
Confidence 478999996431 11222344444333 69999999999864322211 011122333334333 33468999
Q ss_pred EEcCCCCChhhHHHHhhCCccCCceEEeCCceEEEEcCEEEEEecCc
Q 018464 80 FIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGI 126 (355)
Q Consensus 80 fI~GNHE~~~~l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi 126 (355)
+|.||||... ..... -..++..+....+++++|.||.-+.|-
T Consensus 73 ~v~GNHD~~~--~~~~~---~~~gi~~l~~~~~~~~~g~~ill~HGd 114 (231)
T TIGR01854 73 FMHGNRDFLI--GKRFA---REAGMTLLPDPSVIDLYGQKVLLMHGD 114 (231)
T ss_pred EEcCCCchhh--hHHHH---HHCCCEEECCCEEEEECCEEEEEEcCc
Confidence 9999999631 11110 123567787777888999999888774
No 32
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=98.87 E-value=3.8e-07 Score=86.08 Aligned_cols=195 Identities=15% Similarity=0.075 Sum_probs=101.3
Q ss_pred EEEEEcCCCCChH----------------HHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhHHhhhHHH
Q 018464 2 RIAVEGCMHGELD----------------NVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFW 65 (355)
Q Consensus 2 kIlv~GD~HG~ld----------------~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~ 65 (355)
+++++||+|-... .+-+.++.+++.. .++|+||++||+.......+. .+.+...|.
T Consensus 6 ~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~-~~pd~ii~~GDl~~~~~~~~~-------~~~~~~~~~ 77 (262)
T cd07395 6 YFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLN-PKPKFVVVCGDLVNAMPGDEL-------RERQVSDLK 77 (262)
T ss_pred EEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcC-CCCCEEEEeCCcCCCCcchhh-------HHHHHHHHH
Confidence 7899999997641 1222333333322 278999999999865433221 112334455
Q ss_pred HHhcCCCCCCccEEEEcCCCCChhh-----HHHHhhCCccCCceEEeCCceEEEEcCEEEEEecCcCCCcccCCCCCCCC
Q 018464 66 KYYSGQEVAPIPTIFIGGNHEASNY-----LWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERP 140 (355)
Q Consensus 66 ~y~~g~~~~p~pt~fI~GNHE~~~~-----l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~~e~~ 140 (355)
+.+... ..++|+++|.||||.... +... ... ..+. .-.+.++|+|+.++....-. .+. ..
T Consensus 78 ~~~~~~-~~~vp~~~i~GNHD~~~~~~~~~~~~f-~~~-~g~~------~y~~~~~~~~~i~lds~~~~----~~~--~~ 142 (262)
T cd07395 78 DVLSLL-DPDIPLVCVCGNHDVGNTPTEESIKDY-RDV-FGDD------YFSFWVGGVFFIVLNSQLFF----DPS--EV 142 (262)
T ss_pred HHHhhc-cCCCcEEEeCCCCCCCCCCChhHHHHH-HHH-hCCc------ceEEEECCEEEEEecccccc----Ccc--cc
Confidence 554432 246899999999997411 1111 110 0111 11345789999988654311 100 11
Q ss_pred C-CChhhHhhhhhhhhHHHHHHhccCCCccEEEeCCCCCCCccCCcchhhhhhccchhhcccCCCCCcHHHHHHHHHhCC
Q 018464 141 P-YNESTIRSVYHVREYDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKP 219 (355)
Q Consensus 141 p-y~~~~~rs~yh~re~dv~~L~~~~~~vDIllTHdwP~gi~~~g~~~~l~~~kp~f~~~~~~~~lGS~~l~~ll~~lkP 219 (355)
+ ...+++.-+ +..+++..+...+.-|+++|.+|....... . ..+|. ........+.+++++.+-
T Consensus 143 ~~~~~~ql~WL----~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~-~------~~~~~----~~~~~~~~l~~ll~~~~V 207 (262)
T cd07395 143 PELAQAQDVWL----EEQLEIAKESDCKHVIVFQHIPWFLEDPDE-E------DSYFN----IPKSVRKPLLDKFKKAGV 207 (262)
T ss_pred ccchHHHHHHH----HHHHHHHHhccCCcEEEEECcCCccCCCCC-C------cccCC----cCHHHHHHHHHHHHhcCc
Confidence 1 122222222 111111111134567999999996432111 0 00110 001123457788888899
Q ss_pred CEEEEeCCCCcccee
Q 018464 220 SYWFSAHLHCKFAAV 234 (355)
Q Consensus 220 rywfsgH~H~~f~a~ 234 (355)
..+||||.|......
T Consensus 208 ~~v~~GH~H~~~~~~ 222 (262)
T cd07395 208 KAVFSGHYHRNAGGR 222 (262)
T ss_pred eEEEECccccCCceE
Confidence 999999999765543
No 33
>PLN02533 probable purple acid phosphatase
Probab=98.82 E-value=1.4e-07 Score=95.93 Aligned_cols=181 Identities=18% Similarity=0.279 Sum_probs=98.3
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhcCCCCCCccEEE
Q 018464 1 MRIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIF 80 (355)
Q Consensus 1 mkIlv~GD~HG~ld~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~g~~~~p~pt~f 80 (355)
.|++++||.+-. +.....++.+++. .+|++|++||+....... . .-..|.+.++.. .+.+|.+.
T Consensus 140 ~~f~v~GDlG~~-~~~~~tl~~i~~~---~pD~vl~~GDl~y~~~~~---~--------~wd~f~~~i~~l-~s~~P~m~ 203 (427)
T PLN02533 140 IKFAVSGDLGTS-EWTKSTLEHVSKW---DYDVFILPGDLSYANFYQ---P--------LWDTFGRLVQPL-ASQRPWMV 203 (427)
T ss_pred eEEEEEEeCCCC-cccHHHHHHHHhc---CCCEEEEcCccccccchH---H--------HHHHHHHHhhhH-hhcCceEE
Confidence 379999998632 1112334444332 699999999996432111 0 123344443332 23579999
Q ss_pred EcCCCCChhhH------HHHhhCCc--------cCCceEEeCCceEEEEcCEEEEEecCcCCCcccCCCCCCCCCCChhh
Q 018464 81 IGGNHEASNYL------WELYYGGW--------AAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNEST 146 (355)
Q Consensus 81 I~GNHE~~~~l------~el~~gg~--------va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~~e~~py~~~~ 146 (355)
++||||....- ...+..-| ...|.|| .+.++|++|..++... ++.. ..++
T Consensus 204 ~~GNHE~~~~~~~~~~~f~~y~~rf~mP~~~~g~~~~~yY-----Sfd~g~vhfI~Lds~~---~~~~--------~~~Q 267 (427)
T PLN02533 204 THGNHELEKIPILHPEKFTAYNARWRMPFEESGSTSNLYY-----SFNVYGVHIIMLGSYT---DFEP--------GSEQ 267 (427)
T ss_pred eCccccccccccccCcCccchhhcccCCccccCCCCCceE-----EEEECCEEEEEEeCCc---cccC--------chHH
Confidence 99999974210 00000111 1234444 3578999999887632 2211 1112
Q ss_pred HhhhhhhhhHHHHHHhccCCCccEEEeCCCCCCCcc-CCcchhhhhhccchhhcccCCCCC-cHHHHHHHHHhCCCEEEE
Q 018464 147 IRSVYHVREYDVHKLMQIEEPIDIFLSHDWPCGITD-YGNCKELVRHKQYFEKEIQDGTLG-SEPAAQLLEKLKPSYWFS 224 (355)
Q Consensus 147 ~rs~yh~re~dv~~L~~~~~~vDIllTHdwP~gi~~-~g~~~~l~~~kp~f~~~~~~~~lG-S~~l~~ll~~lkPrywfs 224 (355)
.+-+ +.++.+......+.-|++.|-+|..... +.+. ....+ ...+..|+.+.++.++|+
T Consensus 268 ~~WL----e~dL~~~~r~~~pwiIv~~H~P~y~s~~~~~~~---------------~~~~~~r~~le~Ll~~~~Vdlvls 328 (427)
T PLN02533 268 YQWL----ENNLKKIDRKTTPWVVAVVHAPWYNSNEAHQGE---------------KESVGMKESMETLLYKARVDLVFA 328 (427)
T ss_pred HHHH----HHHHHhhcccCCCEEEEEeCCCeeecccccCCc---------------chhHHHHHHHHHHHHHhCCcEEEe
Confidence 2111 2233222112235678999999876432 1110 00111 246888999999999999
Q ss_pred eCCCCccce
Q 018464 225 AHLHCKFAA 233 (355)
Q Consensus 225 gH~H~~f~a 233 (355)
||.|. |++
T Consensus 329 GH~H~-YeR 336 (427)
T PLN02533 329 GHVHA-YER 336 (427)
T ss_pred cceec-ccc
Confidence 99994 443
No 34
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=98.81 E-value=2.4e-07 Score=88.17 Aligned_cols=174 Identities=19% Similarity=0.167 Sum_probs=90.6
Q ss_pred CccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhcCCCCCCccEEEEcCCCCChh---------hHHHHhhCCcc
Q 018464 30 KIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGGNHEASN---------YLWELYYGGWA 100 (355)
Q Consensus 30 ~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~g~~~~p~pt~fI~GNHE~~~---------~l~el~~gg~v 100 (355)
++|++|++||++.......-+.. +.+...|.+.+... ....|++.|+||||-.- ...+...|.
T Consensus 45 ~PD~vv~lGDL~d~G~~~~~~~~-----~~~~~rf~~i~~~~-~~~~pv~~VpGNHDig~~~~~~~~~~~rf~~~Fg~-- 116 (257)
T cd08163 45 KPDSTIFLGDLFDGGRDWADEYW-----KKEYNRFMRIFDPS-PGRKMVESLPGNHDIGFGNGVVLPVRQRFEKYFGP-- 116 (257)
T ss_pred CCCEEEEecccccCCeeCcHHHH-----HHHHHHHHHHhcCC-CccceEEEeCCCcccCCCCCCCHHHHHHHHHHhCC--
Confidence 69999999999764322110000 11244555554221 11368999999999520 011112221
Q ss_pred CCceEEeCCceEEEEcCEEEEEecCcCCCcccCCCCCCCCCCChhhHhhhhhhhhHHHHH-Hhcc-CCCccEEEeCCCCC
Q 018464 101 APNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHK-LMQI-EEPIDIFLSHDWPC 178 (355)
Q Consensus 101 a~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~~e~~py~~~~~rs~yh~re~dv~~-L~~~-~~~vDIllTHdwP~ 178 (355)
...++.++|.+|.++-++.-.... .......+. +. +++ +... ....-||+||-+..
T Consensus 117 --------~~~~~~~~~~~fV~Lds~~l~~~~------~~~~~~~~~-------~~-l~~~l~~~~~~~p~ILl~H~Ply 174 (257)
T cd08163 117 --------TSRVIDVGNHTFVILDTISLSNKD------DPDVYQPPR-------EF-LHSFSAMKVKSKPRILLTHVPLY 174 (257)
T ss_pred --------CceEEEECCEEEEEEccccccCCc------ccccchhHH-------HH-HHhhhhccCCCCcEEEEeccccc
Confidence 124567788999888776321100 000111100 00 111 2222 23456999999976
Q ss_pred CCccCCcchhhhhhccchhh---cccCCCCCcHHHHHHHHHhCCCEEEEeCCCCcccee
Q 018464 179 GITDYGNCKELVRHKQYFEK---EIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAV 234 (355)
Q Consensus 179 gi~~~g~~~~l~~~kp~f~~---~~~~~~lGS~~l~~ll~~lkPrywfsgH~H~~f~a~ 234 (355)
......+ ..+-..++.+.. .--++.+....-..|++.+||+..|+||.|.+.+-.
T Consensus 175 r~~~~~c-g~~re~~~~~~~~~g~~yq~~l~~~~s~~il~~~~P~~vfsGhdH~~C~~~ 232 (257)
T cd08163 175 RPPNTSC-GPLRESKTPLPYGYGYQYQNLLEPSLSEVILKAVQPVIAFSGDDHDYCEVV 232 (257)
T ss_pred cCCCCCC-CCccccCCCCCCCCCccceeecCHHHHHHHHHhhCCcEEEecCCCccceeE
Confidence 5543111 111111111110 001135677788899999999999999999776654
No 35
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=98.80 E-value=1.2e-07 Score=90.58 Aligned_cols=104 Identities=20% Similarity=0.185 Sum_probs=58.9
Q ss_pred CEEEEEcCCCCC----hHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhcCCCCCCc
Q 018464 1 MRIAVEGCMHGE----LDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPI 76 (355)
Q Consensus 1 mkIlv~GD~HG~----ld~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~g~~~~p~ 76 (355)
|||++++|+|.+ .+.+.+.++.+++ .++|+|+++||+.......+. ..+.+.++... ++.
T Consensus 50 ~rI~~lSDlH~~~~~~~~~l~~~v~~i~~---~~pDlVli~GD~~d~~~~~~~------------~~~~~~L~~L~-~~~ 113 (271)
T PRK11340 50 FKILFLADLHYSRFVPLSLISDAIALGIE---QKPDLILLGGDYVLFDMPLNF------------SAFSDVLSPLA-ECA 113 (271)
T ss_pred cEEEEEcccCCCCcCCHHHHHHHHHHHHh---cCCCEEEEccCcCCCCccccH------------HHHHHHHHHHh-hcC
Confidence 799999999976 3334444444433 379999999998752211111 11222222222 246
Q ss_pred cEEEEcCCCCChh------hHHHHhhCCccCCceEEeCCceE-EEEcC--EEEEEec
Q 018464 77 PTIFIGGNHEASN------YLWELYYGGWAAPNIYFLGFAGV-VKFGN--IRIGGLS 124 (355)
Q Consensus 77 pt~fI~GNHE~~~------~l~el~~gg~va~NI~yLg~~gv-~~i~G--lrIaGls 124 (355)
|+|+|.||||... .+.+... ..++..|.+..+ ++.+| +.|+|+.
T Consensus 114 pv~~V~GNHD~~~~~~~~~~~~~~l~----~~gi~lL~n~~~~i~~~~~~i~i~G~~ 166 (271)
T PRK11340 114 PTFACFGNHDRPVGTEKNHLIGETLK----SAGITVLFNQATVIATPNRQFELVGTG 166 (271)
T ss_pred CEEEecCCCCcccCccchHHHHHHHH----hcCcEEeeCCeEEEeeCCcEEEEEEec
Confidence 8999999999631 1222221 134666755443 34444 5667764
No 36
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.80 E-value=2.4e-07 Score=87.90 Aligned_cols=191 Identities=17% Similarity=0.182 Sum_probs=96.2
Q ss_pred EEEEcCCCCChH---H--HH-H-HHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhcCCCCC-
Q 018464 3 IAVEGCMHGELD---N--VY-K-TLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVA- 74 (355)
Q Consensus 3 Ilv~GD~HG~ld---~--i~-~-~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~g~~~~- 74 (355)
|+.++|+|-... . .+ + .++.+++ .++|++|++||+.......+......+. +-.+|.+.+......
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~---~~pd~i~~~GD~~d~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 75 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDV---IKPALVLATGDLTDNKTGNKLPSYQYQE---EWQKYYNILKESSVIN 75 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHh---hCCCEEEEccccccccccCCCcccccHH---HHHHHHHHHHHhCCCC
Confidence 678999996422 1 11 1 1223322 3799999999998544332221110010 111444444332222
Q ss_pred CccEEEEcCCCCChhhH-----HHHh--hCC-ccCCceEEeCCceEEE--EcCEEEEEecCcCCCcccCCCCCCCCC-CC
Q 018464 75 PIPTIFIGGNHEASNYL-----WELY--YGG-WAAPNIYFLGFAGVVK--FGNIRIGGLSGIYNARHYRLGHYERPP-YN 143 (355)
Q Consensus 75 p~pt~fI~GNHE~~~~l-----~el~--~gg-~va~NI~yLg~~gv~~--i~GlrIaGlsGi~~~~~y~~~~~e~~p-y~ 143 (355)
+.|++.|+||||..+.. ...+ +-+ +..+.-+ ...+ .++++|.|+.+...... ..+ +...+ .+
T Consensus 76 ~~p~~~v~GNHD~~~~~~~~~~~~~~~~y~~~~~~~~~~-----~~~~~~~~~~~~I~Ldt~~~~~~-~~~-~~~~g~l~ 148 (256)
T cd07401 76 KEKWFDIRGNHDLFNIPSLDSENNYYRKYSATGRDGSFS-----FSHTTRFGNYSFIGVDPTLFPGP-KRP-FNFFGSLD 148 (256)
T ss_pred cceEEEeCCCCCcCCCCCccchhhHHHHhheecCCCccc-----eEEEecCCCEEEEEEcCccCCCC-CCC-CceeccCC
Confidence 57999999999975221 0110 111 1111111 1122 38899999987642110 000 00001 12
Q ss_pred hhhHhhhhhhhhHHHHHHhcc-CCCccEEEeCCCCCCCccCCcchhhhhhccchhhcccCCCCCcHHHHHHHHHhCCCEE
Q 018464 144 ESTIRSVYHVREYDVHKLMQI-EEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYW 222 (355)
Q Consensus 144 ~~~~rs~yh~re~dv~~L~~~-~~~vDIllTHdwP~gi~~~g~~~~l~~~kp~f~~~~~~~~lGS~~l~~ll~~lkPryw 222 (355)
++++..+ .+.|.+. ..+.-|+++|-++....... ...++. +.+++++.+..+.
T Consensus 149 ~~ql~wL-------~~~L~~~~~~~~~IV~~HhP~~~~~~~~------------------~~~~~~-~~~ll~~~~v~~v 202 (256)
T cd07401 149 KKLLDRL-------EKELEKSTNSNYTIWFGHYPTSTIISPS------------------AKSSSK-FKDLLKKYNVTAY 202 (256)
T ss_pred HHHHHHH-------HHHHHhcccCCeEEEEEcccchhccCCC------------------cchhHH-HHHHHHhcCCcEE
Confidence 2323221 1122222 23567999999885432111 012223 8888999999999
Q ss_pred EEeCCCCccc
Q 018464 223 FSAHLHCKFA 232 (355)
Q Consensus 223 fsgH~H~~f~ 232 (355)
||||.|....
T Consensus 203 l~GH~H~~~~ 212 (256)
T cd07401 203 LCGHLHPLGG 212 (256)
T ss_pred EeCCccCCCc
Confidence 9999998765
No 37
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=98.77 E-value=4.2e-07 Score=83.89 Aligned_cols=195 Identities=14% Similarity=0.162 Sum_probs=102.0
Q ss_pred CEEEEEcCCCCChH----HHHHHHHHHHHhc-CCCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhcCCCCCC
Q 018464 1 MRIAVEGCMHGELD----NVYKTLQYMENIN-SYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAP 75 (355)
Q Consensus 1 mkIlv~GD~HG~ld----~i~~~i~~~~~k~-g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~g~~~~p 75 (355)
.+|+++||+|-..+ .+.+.++.+.+.. ..++|++|++||+...... +..|....+..+- ..+.+
T Consensus 1 f~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~~--------~~~~~~~~~~~~~---l~~~~ 69 (214)
T cd07399 1 FTLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGDN--------DAEWEAADKAFAR---LDKAG 69 (214)
T ss_pred CEEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCCC--------HHHHHHHHHHHHH---HHHcC
Confidence 48999999996322 1112222222211 1269999999999864431 1223334333333 33357
Q ss_pred ccEEEEcCCCCChhhHHHHhhCCccCCceEEeCCceEEEEcCEEEEEecCcCCCcccCCCCCCCCCCChhhHhhhhhhhh
Q 018464 76 IPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVRE 155 (355)
Q Consensus 76 ~pt~fI~GNHE~~~~l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~~e~~py~~~~~rs~yh~re 155 (355)
+|+++++||||. +.++. +. .+.+++.-+ +
T Consensus 70 ~p~~~~~GNHD~--------------------------------~~~ld-------~~--------~~~~ql~WL----~ 98 (214)
T cd07399 70 IPYSVLAGNHDL--------------------------------VLALE-------FG--------PRDEVLQWA----N 98 (214)
T ss_pred CcEEEECCCCcc--------------------------------hhhCC-------CC--------CCHHHHHHH----H
Confidence 899999999981 00110 00 012222211 1
Q ss_pred HHHHHHhccCCCccEEEeCCCCCCCccCCcchhhhhhccchhhcccCCCCCcHHHHHHHHHh-CCCEEEEeCCCCcccee
Q 018464 156 YDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKL-KPSYWFSAHLHCKFAAV 234 (355)
Q Consensus 156 ~dv~~L~~~~~~vDIllTHdwP~gi~~~g~~~~l~~~kp~f~~~~~~~~lGS~~l~~ll~~l-kPrywfsgH~H~~f~a~ 234 (355)
+.|.+.....=|+++|.+|.......+.. .. + .....|...+.+|+++. +-+..||||.|......
T Consensus 99 ---~~L~~~~~~~~iv~~H~p~~~~~~~~~~~--------~~-~-~~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~~~~~ 165 (214)
T cd07399 99 ---EVLKKHPDRPAILTTHAYLNCDDSRPDSI--------DY-D-SDVNDGQQIWDKLVKKNDNVFMVLSGHVHGAGRTT 165 (214)
T ss_pred ---HHHHHCCCCCEEEEecccccCCCCcCccc--------cc-c-cccccHHHHHHHHHhCCCCEEEEEccccCCCceEE
Confidence 12333333345999999987432211100 00 0 01234556777888877 68899999999886655
Q ss_pred ec-cCCCCCeeEEEEccc-cC--CCCCeeEEEeccCCCCC
Q 018464 235 VQ-HGEDSPVTKFLALDK-CL--PRRKFLQVFEIESGQGP 270 (355)
Q Consensus 235 ~~-~~~~~~~TrFlaL~k-~~--~~r~~l~a~~i~~~~~~ 270 (355)
.. .+..++.+.=+..+- +. .+.-|+.++.+.+....
T Consensus 166 ~~~~~~~g~~v~~~~~~~q~~~~~g~~~~r~~~f~~~~~~ 205 (214)
T cd07399 166 LVSVGDAGRTVHQMLADYQGEPNGGNGFLRLLEFDPDNNK 205 (214)
T ss_pred EcccCCCCCEeeEEeecccCCCCCCcceEEEEEEecCCCE
Confidence 41 112233333222222 22 24578888888776543
No 38
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=98.75 E-value=2.8e-07 Score=82.98 Aligned_cols=38 Identities=21% Similarity=0.086 Sum_probs=28.8
Q ss_pred HHHHHHHhCCCEEEEeCCCCccceeeccCCCCCeeEEEEccccC
Q 018464 210 AAQLLEKLKPSYWFSAHLHCKFAAVVQHGEDSPVTKFLALDKCL 253 (355)
Q Consensus 210 l~~ll~~lkPrywfsgH~H~~f~a~~~~~~~~~~TrFlaL~k~~ 253 (355)
+..+++...+.+.++||.|..+..... .++++|.+.++
T Consensus 98 ~~~~~~~~~~dvii~GHTH~p~~~~~~------g~~viNPGSv~ 135 (178)
T cd07394 98 LAALQRQLDVDILISGHTHKFEAFEHE------GKFFINPGSAT 135 (178)
T ss_pred HHHHHHhcCCCEEEECCCCcceEEEEC------CEEEEECCCCC
Confidence 445566678899999999987655442 48999999886
No 39
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=98.75 E-value=4e-07 Score=86.33 Aligned_cols=207 Identities=19% Similarity=0.188 Sum_probs=108.2
Q ss_pred CEEEEEcCCCCC-h---HHHHHHHHHHHHhcCCCccEEEEecCccccCCc--chhhhccchhhHHhhhHHHHHhcCCCCC
Q 018464 1 MRIAVEGCMHGE-L---DNVYKTLQYMENINSYKIDLLLCCGDFQAVRNE--NDMESLNVPRKYREMKSFWKYYSGQEVA 74 (355)
Q Consensus 1 mkIlv~GD~HG~-l---d~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~--~dl~~~~~p~k~~~~~~f~~y~~g~~~~ 74 (355)
|+++++||.-.. - ..+-+.+.++.++ .++|++|++||+...... .+...+ ...|.+.++... .
T Consensus 1 ~~f~~~gD~g~~~~~~~~~~~~~~~~~~~~--~~~dfvv~~GD~~y~~g~~~~~~~~~--------~~~~~~~~~~~~-~ 69 (277)
T cd07378 1 LRFLALGDWGGGGTAGQKAVAKAMAKVAAE--LGPDFILSLGDNFYDDGVGSVDDPRF--------ETTFEDVYSAPS-L 69 (277)
T ss_pred CeEEEEeecCCCCCHHHHHHHHHHHHHHHh--cCCCEEEeCCCccccCCCCCCcchHH--------HHHHHHHccchh-h
Confidence 688999998764 1 2344444555444 268999999998632211 110000 122333333222 5
Q ss_pred CccEEEEcCCCCChhhHHHH-------hhCCccCCceEEeCCceEEEEc------CEEEEEecCcCCCcccCCCC--CCC
Q 018464 75 PIPTIFIGGNHEASNYLWEL-------YYGGWAAPNIYFLGFAGVVKFG------NIRIGGLSGIYNARHYRLGH--YER 139 (355)
Q Consensus 75 p~pt~fI~GNHE~~~~l~el-------~~gg~va~NI~yLg~~gv~~i~------GlrIaGlsGi~~~~~y~~~~--~e~ 139 (355)
.+|+++|+||||........ ....|..|+-|| .+.++ +++|.+|-.......+.... ...
T Consensus 70 ~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~y-----~~~~~~~~~~~~~~~i~LDt~~~~~~~~~~~~~~~~ 144 (277)
T cd07378 70 QVPWYLVLGNHDYSGNVSAQIDYTKRPNSPRWTMPAYYY-----RVSFPFPSSDTTVEFIMIDTVPLCGNSDDIASPYGP 144 (277)
T ss_pred cCCeEEecCCcccCCCchheeehhccCCCCCccCcchhe-----EEEeecCCCCCEEEEEEEeChhHcCccccccccccC
Confidence 78999999999976322111 012233344332 23344 68998887654321111000 000
Q ss_pred CC--CChhhHhhhhhhhhHHHHHHhccCCCccEEEeCCCCCCCccCCcchhhhhhccchhhcccCCCCCcHHHHHHHHHh
Q 018464 140 PP--YNESTIRSVYHVREYDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKL 217 (355)
Q Consensus 140 ~p--y~~~~~rs~yh~re~dv~~L~~~~~~vDIllTHdwP~gi~~~g~~~~l~~~kp~f~~~~~~~~lGS~~l~~ll~~l 217 (355)
.. ...+++.-+ -+.|.+...+.-|+++|-+|......+.. ..-...+.+++++.
T Consensus 145 ~~~~~~~~Q~~wL-------~~~L~~~~~~~~iv~~H~P~~~~~~~~~~-----------------~~~~~~l~~l~~~~ 200 (277)
T cd07378 145 PNGKLAEEQLAWL-------EKTLAASTADWKIVVGHHPIYSSGEHGPT-----------------SCLVDRLLPLLKKY 200 (277)
T ss_pred cchhhHHHHHHHH-------HHHHHhcCCCeEEEEeCccceeCCCCCCc-----------------HHHHHHHHHHHHHc
Confidence 00 011111111 11233333456699999998754332210 01134577888888
Q ss_pred CCCEEEEeCCCCccceeeccCCCCCeeEEEEccc
Q 018464 218 KPSYWFSAHLHCKFAAVVQHGEDSPVTKFLALDK 251 (355)
Q Consensus 218 kPrywfsgH~H~~f~a~~~~~~~~~~TrFlaL~k 251 (355)
+..++|+||.|........ ...|.++..+.
T Consensus 201 ~v~~vl~GH~H~~~~~~~~----~~~~~~i~~G~ 230 (277)
T cd07378 201 KVDAYLSGHDHNLQHIKDD----GSGTSFVVSGA 230 (277)
T ss_pred CCCEEEeCCcccceeeecC----CCCcEEEEeCC
Confidence 9999999999986533221 13577776653
No 40
>PHA02546 47 endonuclease subunit; Provisional
Probab=98.75 E-value=1.2e-07 Score=93.59 Aligned_cols=110 Identities=21% Similarity=0.151 Sum_probs=63.1
Q ss_pred CEEEEEcCCCCC-----------hHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhc
Q 018464 1 MRIAVEGCMHGE-----------LDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYS 69 (355)
Q Consensus 1 mkIlv~GD~HG~-----------ld~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~ 69 (355)
|||+.++|+|=. ....++.+-.+-++. ++|+||++||++..+.......+ ....+ .+..
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~--~vD~VliaGDlfD~~~~~~~~~~------~~~~~--~l~~ 70 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAH--GITTWIQLGDTFDVRKAITQNTM------NFVRE--KIFD 70 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHc--CCCEEEECCcccCCCCCCCHHHH------HHHHH--HHHH
Confidence 999999999932 122333332222232 69999999999976532221111 11111 0122
Q ss_pred CCCCCCccEEEEcCCCCChh-------hHHHHhhCCccCCceEEeCCceEEEEcCEEEEEe
Q 018464 70 GQEVAPIPTIFIGGNHEASN-------YLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGL 123 (355)
Q Consensus 70 g~~~~p~pt~fI~GNHE~~~-------~l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGl 123 (355)
...++++|+++|.||||... ...++.. ..+|++.......++++|++|..+
T Consensus 71 ~L~~~gi~v~~I~GNHD~~~~~~~~~~~~~~ll~---~~~~v~v~~~~~~v~i~g~~i~~l 128 (340)
T PHA02546 71 LLKEAGITLHVLVGNHDMYYKNTIRPNAPTELLG---QYDNITVIDEPTTVDFDGCSIDLI 128 (340)
T ss_pred HHHHCCCeEEEEccCCCcccccccccCchHHHHh---hCCCEEEeCCceEEEECCEEEEEC
Confidence 23456899999999999631 0122211 236777676666677777766553
No 41
>PRK09453 phosphodiesterase; Provisional
Probab=98.74 E-value=5.9e-08 Score=87.04 Aligned_cols=106 Identities=20% Similarity=0.197 Sum_probs=61.6
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhcCCCCCCccEEE
Q 018464 1 MRIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIF 80 (355)
Q Consensus 1 mkIlv~GD~HG~ld~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~g~~~~p~pt~f 80 (355)
|||+++||+||+..++-+.++.+++. ++|.+|||||+....... ..|.+|. ..++.+.+ ++...++++
T Consensus 1 mri~viSD~Hg~~~~~~~~l~~~~~~---~~d~ii~lGDi~~~~~~~-----~~~~~~~-~~~~~~~l---~~~~~~v~~ 68 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALELFAQS---GADWLVHLGDVLYHGPRN-----PLPEGYA-PKKVAELL---NAYADKIIA 68 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHhc---CCCEEEEcccccccCcCC-----CCccccC-HHHHHHHH---HhcCCceEE
Confidence 99999999999987655544444332 689999999997532110 1111121 11223332 223457999
Q ss_pred EcCCCCChhhHHHHhhCCccCCceEEeCCceEEEEcCEEEEEecCc
Q 018464 81 IGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGI 126 (355)
Q Consensus 81 I~GNHE~~~~l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi 126 (355)
|.||||... .....+. + .+.....++++|.||.-+.|.
T Consensus 69 V~GNhD~~~--~~~~~~~---~---~~~~~~~~~l~g~~i~l~HG~ 106 (182)
T PRK09453 69 VRGNCDSEV--DQMLLHF---P---IMAPYQQVLLEGKRLFLTHGH 106 (182)
T ss_pred EccCCcchh--hhhccCC---c---ccCceEEEEECCeEEEEECCC
Confidence 999999631 1111111 1 112224467899999877763
No 42
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=98.70 E-value=2.8e-07 Score=86.45 Aligned_cols=220 Identities=15% Similarity=0.169 Sum_probs=110.9
Q ss_pred EEEcCCC--CCh--HHHHHH-HHHHHHhc--CCCccEEEEecCccccCCc--chhhhccchhhHHhhhHHHHHhcCCCCC
Q 018464 4 AVEGCMH--GEL--DNVYKT-LQYMENIN--SYKIDLLLCCGDFQAVRNE--NDMESLNVPRKYREMKSFWKYYSGQEVA 74 (355)
Q Consensus 4 lv~GD~H--G~l--d~i~~~-i~~~~~k~--g~~~DllI~~GDf~~~~~~--~dl~~~~~p~k~~~~~~f~~y~~g~~~~ 74 (355)
++++|+| +.. ...++. ++.++... ..++|+||++||++..... .....+......+.+..+.++++... .
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~-~ 80 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVP-S 80 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhcc-c
Confidence 6899999 321 122222 22222211 1257999999999865311 00000000111223344555555444 3
Q ss_pred CccEEEEcCCCCChhhH------HHHhhCCccCCceEEeCCceEEEEcCEEEEEecCcCCCcccCCCCCCCCCCChhhHh
Q 018464 75 PIPTIFIGGNHEASNYL------WELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIR 148 (355)
Q Consensus 75 p~pt~fI~GNHE~~~~l------~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~~e~~py~~~~~r 148 (355)
.+++++|+||||..... .+.........|+..+.....++++|.+|.+.+|..-. +..+. -...+.+..
T Consensus 81 ~~~v~~ipGNHD~~~~~~pq~~l~~~l~~~~~~~~v~~l~Np~~~~~~g~~i~~~~G~~~~-d~~~~---~~~~~~~~~- 155 (243)
T cd07386 81 HIKIIIIPGNHDAVRQAEPQPALPEEIRKLFLPGNVEFVSNPALVKIHGVDVLIYHGRSID-DVVKL---IPGLSYDKP- 155 (243)
T ss_pred CCeEEEeCCCCCcccccCCCCCccHHHHhhcCCCceEEeCCCCEEEECCEEEEEECCCCHH-HHHHh---CCCCCcccH-
Confidence 58999999999985321 11111111136788887766778999999988886421 11000 000010000
Q ss_pred hhhhhhhHHHHHHhccCCCccEEEeCCCCCCCccCCcchhhhhhccchhhcccCCCCCcHHHHHHHHHhCCCEEEEeCCC
Q 018464 149 SVYHVREYDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLH 228 (355)
Q Consensus 149 s~yh~re~dv~~L~~~~~~vDIllTHdwP~gi~~~g~~~~l~~~kp~f~~~~~~~~lGS~~l~~ll~~lkPrywfsgH~H 228 (355)
..-++.+... .|-+|..-.. . +.+.... +.+...-.|.+.|+||.|
T Consensus 156 ------~~~~~~~l~~--------~hl~P~~~~~---~-------~~~~~~~----------~~~~~~~~p~vii~Gh~h 201 (243)
T cd07386 156 ------GKAMEELLKR--------RHLAPIYGGR---T-------PIAPEPE----------DYLVIDEVPDILHTGHVH 201 (243)
T ss_pred ------HHHHHHHHhh--------cccCCCCCCC---E-------eeCCCCC----------CCEEecCCCCEEEECCCC
Confidence 0001111111 1333321100 0 0000000 001122489999999999
Q ss_pred CccceeeccCCCCCeeEEEEccccCCCCCeeEEEeccCCCC
Q 018464 229 CKFAAVVQHGEDSPVTKFLALDKCLPRRKFLQVFEIESGQG 269 (355)
Q Consensus 229 ~~f~a~~~~~~~~~~TrFlaL~k~~~~r~~l~a~~i~~~~~ 269 (355)
..+.... + .+++++.+.+-.+-.|=.-|.|.+.++
T Consensus 202 ~~~~~~~-~-----~~~~vn~Gsf~~~~~~~~~~~~~~~~~ 236 (243)
T cd07386 202 VYGVGVY-R-----GVLLVNSGTWQSQTEFQKKMNINPTPG 236 (243)
T ss_pred chHhEEE-C-----CEEEEECCCCcCCCCcceeeccCCCcc
Confidence 8665543 2 489999999987777777787766544
No 43
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=98.60 E-value=1.6e-07 Score=84.28 Aligned_cols=89 Identities=25% Similarity=0.269 Sum_probs=62.3
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhcCCCCCCccEEE
Q 018464 1 MRIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIF 80 (355)
Q Consensus 1 mkIlv~GD~HG~ld~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~g~~~~p~pt~f 80 (355)
|||+|+||+|+....+...++ +... .++|++|+|||+........+ .+. ...+.++
T Consensus 2 m~ilviSDtH~~~~~~~~~~~-~~~~--~~~d~vih~GD~~~~~~~~~l-------------------~~~--~~~~i~~ 57 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALK-IFNL--EKVDAVIHAGDSTSPFTLDAL-------------------EGG--LAAKLIA 57 (172)
T ss_pred cEEEEEeccCCChhhhhHHHH-Hhhh--cCCCEEEECCCcCCccchHHh-------------------hcc--cccceEE
Confidence 899999999999865443332 2222 269999999999876543221 110 2457899
Q ss_pred EcCCCCChhhHHHHhhCCccCCceEEeCCceEEEEcCEEEEEecCc
Q 018464 81 IGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGI 126 (355)
Q Consensus 81 I~GNHE~~~~l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi 126 (355)
|.||+|....- .-++...+++++|+||+-+.|.
T Consensus 58 V~GN~D~~~~~-------------~~~p~~~~~~~~g~ki~l~HGh 90 (172)
T COG0622 58 VRGNCDGEVDQ-------------EELPEELVLEVGGVKIFLTHGH 90 (172)
T ss_pred EEccCCCcccc-------------ccCChhHeEEECCEEEEEECCC
Confidence 99999875311 0145678899999999999884
No 44
>PHA03008 hypothetical protein; Provisional
Probab=98.58 E-value=1.6e-07 Score=84.68 Aligned_cols=96 Identities=22% Similarity=0.270 Sum_probs=61.3
Q ss_pred CceEEeCCceEEEE----cCEEEEEecCcCCCcccCCC--C--CCCCCCChhhHhhhhhhhhHHHHHHhccCCCccEEEe
Q 018464 102 PNIYFLGFAGVVKF----GNIRIGGLSGIYNARHYRLG--H--YERPPYNESTIRSVYHVREYDVHKLMQIEEPIDIFLS 173 (355)
Q Consensus 102 ~NI~yLg~~gv~~i----~GlrIaGlsGi~~~~~y~~~--~--~e~~py~~~~~rs~yh~re~dv~~L~~~~~~vDIllT 173 (355)
-|+.||.++++ ++ .|++|.|-+-+-. ..|... | .+.+.|..+ ++.+......+. ++|||||
T Consensus 99 gnIIYLeDs~V-tI~f~~rgIKIYGSP~sP~-~~F~~sai~k~~~~wAf~~~--------~d~~i~wwn~IP-~tDILIT 167 (234)
T PHA03008 99 LDIIILRDDLI-EFDFFDDIIKIYGQSHIED-KKFKNSHIHKALEGIAHIKK--------NDDEINYRNHIP-KCDILIT 167 (234)
T ss_pred CCEEEEeCCcE-EEEecCCceEEECCCCCcc-hhcccccccccccccccccC--------ccccchhhccCC-CCCEEEe
Confidence 57899988876 45 7899988554321 001000 0 012223211 111111223444 4999999
Q ss_pred CCCCCCCccCCcchhhhhhccchhhcccCCCCCcHHHHHHHHHhCCCEEEEeCCC
Q 018464 174 HDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLH 228 (355)
Q Consensus 174 HdwP~gi~~~g~~~~l~~~kp~f~~~~~~~~lGS~~l~~ll~~lkPrywfsgH~H 228 (355)
|.+|.|+.+. .+|++.+.+-+.++||+||++||+-
T Consensus 168 HgPP~GhLD~--------------------~vGC~~Ll~~I~rVKPKyHVFGh~~ 202 (234)
T PHA03008 168 ASPPFAILDD--------------------DLACGDLFSKVIKIKPKFHIFNGLT 202 (234)
T ss_pred CCCCcccccc--------------------ccCcHHHHHHHHHhCCcEEEeCCcc
Confidence 9999999652 4799998888899999999999974
No 45
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=98.55 E-value=1.1e-06 Score=79.81 Aligned_cols=74 Identities=20% Similarity=0.154 Sum_probs=46.9
Q ss_pred CEEEEEcCCCCChH-----------HHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhc
Q 018464 1 MRIAVEGCMHGELD-----------NVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYS 69 (355)
Q Consensus 1 mkIlv~GD~HG~ld-----------~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~ 69 (355)
+||++++|+|-... ...+.++++-++ .++|+||++||+.......+ .-+..+..+.+.+
T Consensus 3 ~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~d~vv~~GDl~~~~~~~~-------~~~~~~~~~~~~l- 72 (199)
T cd07383 3 FKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDA--EKPDLVVLTGDLITGENTND-------NSTSALDKAVSPM- 72 (199)
T ss_pred eEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhh--cCCCEEEECCccccCCCCch-------HHHHHHHHHHHHH-
Confidence 69999999996322 223334433333 26899999999976433221 1134455555543
Q ss_pred CCCCCCccEEEEcCCCC
Q 018464 70 GQEVAPIPTIFIGGNHE 86 (355)
Q Consensus 70 g~~~~p~pt~fI~GNHE 86 (355)
....+|+++|.||||
T Consensus 73 --~~~~~p~~~~~GNHD 87 (199)
T cd07383 73 --IDRKIPWAATFGNHD 87 (199)
T ss_pred --HHcCCCEEEECccCC
Confidence 334689999999999
No 46
>PHA02239 putative protein phosphatase
Probab=98.49 E-value=2.7e-07 Score=86.73 Aligned_cols=73 Identities=16% Similarity=0.271 Sum_probs=50.7
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhcCCCCCCccEEE
Q 018464 1 MRIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIF 80 (355)
Q Consensus 1 mkIlv~GD~HG~ld~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~g~~~~p~pt~f 80 (355)
|||+++||+||.++.+.+.++.++...+ +.|.||++||+..-...+ .+ .+..+.+. ...+..+++
T Consensus 1 m~~~~IsDIHG~~~~l~~ll~~i~~~~~-~~d~li~lGD~iDrG~~s-~~---------v~~~l~~~----~~~~~~~~~ 65 (235)
T PHA02239 1 MAIYVVPDIHGEYQKLLTIMDKINNERK-PEETIVFLGDYVDRGKRS-KD---------VVNYIFDL----MSNDDNVVT 65 (235)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHhhcCC-CCCEEEEecCcCCCCCCh-HH---------HHHHHHHH----hhcCCCeEE
Confidence 8999999999999988877777755433 579999999998643221 11 12222222 223457999
Q ss_pred EcCCCCCh
Q 018464 81 IGGNHEAS 88 (355)
Q Consensus 81 I~GNHE~~ 88 (355)
|.||||..
T Consensus 66 l~GNHE~~ 73 (235)
T PHA02239 66 LLGNHDDE 73 (235)
T ss_pred EECCcHHH
Confidence 99999864
No 47
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=98.44 E-value=1.2e-05 Score=75.69 Aligned_cols=77 Identities=32% Similarity=0.419 Sum_probs=52.4
Q ss_pred CEEEEEcCCCCC--h---H-HHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhcCCCCC
Q 018464 1 MRIAVEGCMHGE--L---D-NVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVA 74 (355)
Q Consensus 1 mkIlv~GD~HG~--l---d-~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~g~~~~ 74 (355)
|||+.++|.|-. - . .+-+.++.++. .++|+||+.||+..... +.-|+.+.+|.+ ....
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~~~i~~---~~~D~~v~tGDl~~~~~---------~~~~~~~~~~l~----~~~~ 64 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALLAAIEQ---LKPDLLVVTGDLTNDGE---------PEEYRRLKELLA----RLEL 64 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHHHHHhc---CCCCEEEEccCcCCCCC---------HHHHHHHHHHHh----hccC
Confidence 899999999976 1 1 22222344432 26799999999976521 344666666665 2356
Q ss_pred CccEEEEcCCCCChhhHHH
Q 018464 75 PIPTIFIGGNHEASNYLWE 93 (355)
Q Consensus 75 p~pt~fI~GNHE~~~~l~e 93 (355)
+.|+++++||||......+
T Consensus 65 ~~~~~~vpGNHD~~~~~~~ 83 (301)
T COG1409 65 PAPVIVVPGNHDARVVNGE 83 (301)
T ss_pred CCceEeeCCCCcCCchHHH
Confidence 8899999999998765444
No 48
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=98.42 E-value=6.6e-06 Score=77.01 Aligned_cols=112 Identities=19% Similarity=0.138 Sum_probs=66.0
Q ss_pred CEEEEEcCCCCCh---------HHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhcCC
Q 018464 1 MRIAVEGCMHGEL---------DNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQ 71 (355)
Q Consensus 1 mkIlv~GD~HG~l---------d~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~g~ 71 (355)
++|+.++|+||.+ ..+...++++++. + +-.+++..||+.......+. .+.+.|-+.+
T Consensus 1 l~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~-~-~~~l~v~~GD~~~~~~~~~~------~~~~~~~~~l------ 66 (252)
T cd00845 1 LTILHTNDLHGHFEPAGGVGGAARLATLIKEERAE-N-ENTLLLDAGDNFDGSPPSTA------TKGEANIELM------ 66 (252)
T ss_pred CEEEEecccccCccccCCcCCHHHHHHHHHHHHhc-C-CCeEEEeCCccCCCccchhc------cCCcHHHHHH------
Confidence 6899999999776 4555556665544 2 33488999999764332221 1112222222
Q ss_pred CCCCccEEEEcCCCCChh---hHHHHhh---CCccCCceEEeC---------CceEEEEcCEEEEEecCcC
Q 018464 72 EVAPIPTIFIGGNHEASN---YLWELYY---GGWAAPNIYFLG---------FAGVVKFGNIRIGGLSGIY 127 (355)
Q Consensus 72 ~~~p~pt~fI~GNHE~~~---~l~el~~---gg~va~NI~yLg---------~~gv~~i~GlrIaGlsGi~ 127 (355)
+.+. ..+++.||||... .+.+... ..+++.|+.+-+ ..-+++++|+|||-+|-..
T Consensus 67 ~~~g-~d~~~~GNHe~d~g~~~l~~~~~~~~~~~l~aNv~~~~~~~~~~~~~~~~i~~~~g~kIgiiG~~~ 136 (252)
T cd00845 67 NALG-YDAVTIGNHEFDYGLDALAELYKDANFPVLSANLYDKDTGTGPPWAKPYKIIEVDGVKIGVIGLTT 136 (252)
T ss_pred HhcC-CCEEeeccccccccHHHHHHHHHhCCCCEEEEeeeccCCCCCCCCcCCeEEEEECCEEEEEEEecc
Confidence 2233 3567789999752 2333321 236677887643 1347788999998766543
No 49
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=98.40 E-value=3.1e-07 Score=88.30 Aligned_cols=69 Identities=19% Similarity=0.255 Sum_probs=48.3
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhcCCCCCCccEEE
Q 018464 1 MRIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIF 80 (355)
Q Consensus 1 mkIlv~GD~HG~ld~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~g~~~~p~pt~f 80 (355)
|+|+|+||+||+++++.+.++++.-. .+.|.||++||+..-...+ .+. .+++.. ....+++
T Consensus 1 M~~~vIGDIHG~~~~l~~ll~~~~~~--~~~D~li~lGDlVdrGp~s-~~v-------------l~~l~~---l~~~~~~ 61 (275)
T PRK00166 1 MATYAIGDIQGCYDELQRLLEKIDFD--PAKDTLWLVGDLVNRGPDS-LEV-------------LRFVKS---LGDSAVT 61 (275)
T ss_pred CcEEEEEccCCCHHHHHHHHHhcCCC--CCCCEEEEeCCccCCCcCH-HHH-------------HHHHHh---cCCCeEE
Confidence 89999999999999988777655211 2589999999998754322 221 223222 2346889
Q ss_pred EcCCCCCh
Q 018464 81 IGGNHEAS 88 (355)
Q Consensus 81 I~GNHE~~ 88 (355)
|.||||..
T Consensus 62 VlGNHD~~ 69 (275)
T PRK00166 62 VLGNHDLH 69 (275)
T ss_pred EecChhHH
Confidence 99999874
No 50
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=98.36 E-value=1.3e-05 Score=71.94 Aligned_cols=174 Identities=24% Similarity=0.328 Sum_probs=102.0
Q ss_pred CEEEEEcCCCCC-----------------hHHHHHHHHHHHHhcCCCccEEEEecCcc-ccCCcchhhhccchhhHHhhh
Q 018464 1 MRIAVEGCMHGE-----------------LDNVYKTLQYMENINSYKIDLLLCCGDFQ-AVRNENDMESLNVPRKYREMK 62 (355)
Q Consensus 1 mkIlv~GD~HG~-----------------ld~i~~~i~~~~~k~g~~~DllI~~GDf~-~~~~~~dl~~~~~p~k~~~~~ 62 (355)
|+|..+.|.|-. -++|.+ ....+-. +-|+|++.||.- +.+=++. ..
T Consensus 1 M~iyaiaDLHLa~~~pKpM~vFGe~W~gh~ekI~k---~W~~~v~-~eDiVllpGDiSWaM~l~ea------------~~ 64 (230)
T COG1768 1 MRIYAIADLHLALGVPKPMEVFGEPWSGHHEKIKK---HWRSKVS-PEDIVLLPGDISWAMRLEEA------------EE 64 (230)
T ss_pred CceeeeehhhHhhCCCCceeecCCcccCchHHHHH---HHHhcCC-hhhEEEecccchhheechhh------------hh
Confidence 888899998832 233332 2222222 679999999986 2221111 11
Q ss_pred HHHHHhcCCCCCCccEEEEcCCCCCh-hhHHHHhhCCccCCceEEeCCceEEEEcCEEEEEecCcCCCcccCCCCCCCCC
Q 018464 63 SFWKYYSGQEVAPIPTIFIGGNHEAS-NYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPP 141 (355)
Q Consensus 63 ~f~~y~~g~~~~p~pt~fI~GNHE~~-~~l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~~e~~p 141 (355)
|| +++ ..+|=..|.|.||||-= .....+.. -+-|-++|+.+ + +.+..+-|+|.-|=..+ .+...|
T Consensus 65 Dl-~~i---~~LPG~K~m~rGNHDYWw~s~skl~n--~lp~~l~~~n~-~-f~l~n~aI~G~RgW~s~------~~~~e~ 130 (230)
T COG1768 65 DL-RFI---GDLPGTKYMIRGNHDYWWSSISKLNN--ALPPILFYLNN-G-FELLNYAIVGVRGWDSP------SFDSEP 130 (230)
T ss_pred hh-hhh---hcCCCcEEEEecCCccccchHHHHHh--hcCchHhhhcc-c-eeEeeEEEEEeecccCC------CCCcCc
Confidence 11 243 33577789999999852 11111111 13344566654 3 34555888887664432 123456
Q ss_pred CChhhHhhhhhhhhHHHHHH---hccCCCcc--EEEeCCCCCCCccCCcchhhhhhccchhhcccCCCCCcHHHHHHHHH
Q 018464 142 YNESTIRSVYHVREYDVHKL---MQIEEPID--IFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEK 216 (355)
Q Consensus 142 y~~~~~rs~yh~re~dv~~L---~~~~~~vD--IllTHdwP~gi~~~g~~~~l~~~kp~f~~~~~~~~lGS~~l~~ll~~ 216 (355)
|++++-+-+ .||..--++ .+++.+++ |++||-+|..-.. .++ +++++++.
T Consensus 131 ~te~Deki~--~RE~~RLrlsa~a~l~k~~~~fivM~HYPP~s~~~----------------------t~~-~~sevlee 185 (230)
T COG1768 131 LTEQDEKIF--LREIGRLRLSADAALPKGVSKFIVMTHYPPFSDDG----------------------TPG-PFSEVLEE 185 (230)
T ss_pred cchhHHHHH--HHHHHHHHHHHHHhcccCcCeEEEEEecCCCCCCC----------------------CCc-chHHHHhh
Confidence 888775433 355543333 33455555 8899999975322 122 47899999
Q ss_pred hCCCEEEEeCCCC
Q 018464 217 LKPSYWFSAHLHC 229 (355)
Q Consensus 217 lkPrywfsgH~H~ 229 (355)
-|+...+.||+|-
T Consensus 186 ~rv~~~lyGHlHg 198 (230)
T COG1768 186 GRVSKCLYGHLHG 198 (230)
T ss_pred cceeeEEeeeccC
Confidence 9999999999993
No 51
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=98.34 E-value=3.1e-05 Score=73.89 Aligned_cols=223 Identities=15% Similarity=0.085 Sum_probs=111.1
Q ss_pred CEEEEEcCCCCChH----------------HHHHHHHHHHHhcCCCccEEEE-ecCccccCCcchhhhccchhhHHhhhH
Q 018464 1 MRIAVEGCMHGELD----------------NVYKTLQYMENINSYKIDLLLC-CGDFQAVRNENDMESLNVPRKYREMKS 63 (355)
Q Consensus 1 mkIlv~GD~HG~ld----------------~i~~~i~~~~~k~g~~~DllI~-~GDf~~~~~~~dl~~~~~p~k~~~~~~ 63 (355)
++|+.++|+||.+. .+...++++.++ ..|+|++ +||++......++..-.-+.|-..+-+
T Consensus 1 l~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~---~~~~l~ld~GD~~~gs~~~~~~~~~~~~~~~~~~~ 77 (277)
T cd07410 1 LRILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAE---NPNTLLIDNGDTIQGSPLADYYAKIEDGDPHPMIA 77 (277)
T ss_pred CeEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhc---CCCeEEEeCCccCCccHHHHHhhhcccCCCChHHH
Confidence 58999999999863 244445444433 3577776 999975432111100000001111222
Q ss_pred HHHHhcCCCCCCccEEEEcCCCCCh---hhHHHHhh---CCccCCceEEeC-------CceEEEEc-CEEEEEecCcCCC
Q 018464 64 FWKYYSGQEVAPIPTIFIGGNHEAS---NYLWELYY---GGWAAPNIYFLG-------FAGVVKFG-NIRIGGLSGIYNA 129 (355)
Q Consensus 64 f~~y~~g~~~~p~pt~fI~GNHE~~---~~l~el~~---gg~va~NI~yLg-------~~gv~~i~-GlrIaGlsGi~~~ 129 (355)
.+ ..+.+ .+++.||||.. ..+.+... -.+++.|+++.. ..-+++++ |+|||-+|-....
T Consensus 78 ~l------n~~g~-d~~~lGNHe~d~g~~~l~~~~~~~~~~~l~aNv~~~~~~~~~~~~~~i~~~~~g~kVgviG~~~~~ 150 (277)
T cd07410 78 AM------NALGY-DAGTLGNHEFNYGLDYLDKVIKQANFPVLSANVIDADTGEPFLKPYVILERDVGVKVGIIGLTTPQ 150 (277)
T ss_pred HH------HhcCC-CEEeecccCcccCHHHHHHHHHhCCCCEEEEEEEeCCCCCcccCCEEEEEecCCCEEEEEecCCcc
Confidence 22 22333 46777999975 23333332 347889998764 22466889 9999987754332
Q ss_pred cc-cCCC-CCCCCCCChhhHhhhhhhhhHHHHHHhccCCCccEEEeCCCCCCCccCCcchhhhhhccchhhcccCCCCCc
Q 018464 130 RH-YRLG-HYERPPYNESTIRSVYHVREYDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGS 207 (355)
Q Consensus 130 ~~-y~~~-~~e~~py~~~~~rs~yh~re~dv~~L~~~~~~vDIllTHdwP~gi~~~g~~~~l~~~kp~f~~~~~~~~lGS 207 (355)
.. +..+ ......+.. .+.++ +..+.+|.+...++=|+|+|..-..-.. ......
T Consensus 151 ~~~~~~~~~~~~~~~~d-~~~~~----~~~v~~lr~~~~D~IIvl~H~g~~~~~~-------------------~~~~~~ 206 (277)
T cd07410 151 IPNWEKPNLIGGLKFTD-PVETA----KKYVPKLRAEGADVVVVLAHGGFERDLE-------------------ESLTGE 206 (277)
T ss_pred cccccCcccCCCcEEcC-HHHHH----HHHHHHHHHcCCCEEEEEecCCcCCCcc-------------------cccCCc
Confidence 11 1000 001111211 11111 1223344432234446788874332110 011222
Q ss_pred HHHHHHHHH-hCCCEEEEeCCCCccceeeccCCCCCeeEEEEccccCCCCCeeEEEecc
Q 018464 208 EPAAQLLEK-LKPSYWFSAHLHCKFAAVVQHGEDSPVTKFLALDKCLPRRKFLQVFEIE 265 (355)
Q Consensus 208 ~~l~~ll~~-lkPrywfsgH~H~~f~a~~~~~~~~~~TrFlaL~k~~~~r~~l~a~~i~ 265 (355)
....+|+++ -.....|+||-|..+.... ...|..+. .+..-+++..++|.
T Consensus 207 ~~~~~la~~~~~vD~IlgGHsH~~~~~~~-----~~~~~v~q---~g~~g~~vg~l~l~ 257 (277)
T cd07410 207 NAAYELAEEVPGIDAILTGHQHRRFPGPT-----VNGVPVVQ---PGNWGSHLGVIDLT 257 (277)
T ss_pred cHHHHHHhcCCCCcEEEeCCCccccccCC-----cCCEEEEc---CChhhCEEEEEEEE
Confidence 334566666 3568899999998775421 12344443 33455677777664
No 52
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=98.31 E-value=7.5e-07 Score=83.26 Aligned_cols=73 Identities=15% Similarity=0.167 Sum_probs=48.1
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHHHh-------cCCCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhcCCCC
Q 018464 1 MRIAVEGCMHGELDNVYKTLQYMENI-------NSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEV 73 (355)
Q Consensus 1 mkIlv~GD~HG~ld~i~~~i~~~~~k-------~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~g~~~ 73 (355)
|||+|+||+||+++++.+.++.+.-. .+.+.|.||++||+..-... -.++ .+++.....
T Consensus 1 ~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~-s~ev-------------l~~l~~l~~ 66 (234)
T cd07423 1 GPFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPD-SPEV-------------LRLVMSMVA 66 (234)
T ss_pred CCeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCC-HHHH-------------HHHHHHHhh
Confidence 89999999999999998887766321 11147999999999864322 1121 223222211
Q ss_pred CCccEEEEcCCCCCh
Q 018464 74 APIPTIFIGGNHEAS 88 (355)
Q Consensus 74 ~p~pt~fI~GNHE~~ 88 (355)
.-.+++|.||||..
T Consensus 67 -~~~~~~v~GNHE~~ 80 (234)
T cd07423 67 -AGAALCVPGNHDNK 80 (234)
T ss_pred -CCcEEEEECCcHHH
Confidence 22578999999863
No 53
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=98.26 E-value=2.3e-06 Score=85.74 Aligned_cols=78 Identities=28% Similarity=0.429 Sum_probs=53.7
Q ss_pred CEEEEEcCCCCC---------hHH----HHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHH
Q 018464 1 MRIAVEGCMHGE---------LDN----VYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKY 67 (355)
Q Consensus 1 mkIlv~GD~HG~---------ld~----i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y 67 (355)
|||+.++|+|=. .+. +.+.++.+.+. .+|+||++||+|...+..- +.+..|.+.
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~---~vD~vliAGDlFd~~~Ps~----------~a~~~~~~~ 67 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEE---KVDFVLIAGDLFDTNNPSP----------RALKLFLEA 67 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHHc---cCCEEEEccccccCCCCCH----------HHHHHHHHH
Confidence 999999999954 222 33333333222 6899999999997654321 234455555
Q ss_pred hcCCCCCCccEEEEcCCCCChhhH
Q 018464 68 YSGQEVAPIPTIFIGGNHEASNYL 91 (355)
Q Consensus 68 ~~g~~~~p~pt~fI~GNHE~~~~l 91 (355)
+.-...+.+|+|.|.||||....+
T Consensus 68 l~~l~~~~Ipv~~I~GNHD~~~~~ 91 (390)
T COG0420 68 LRRLKDAGIPVVVIAGNHDSPSRL 91 (390)
T ss_pred HHHhccCCCcEEEecCCCCchhcc
Confidence 555667889999999999988643
No 54
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=98.24 E-value=1.4e-05 Score=73.15 Aligned_cols=42 Identities=29% Similarity=0.331 Sum_probs=34.0
Q ss_pred EEEeCCCCCCCccCCcchhhhhhccchhhcccCCCCCcHHHHHHHHHhCCCEEEEeCCCCccceeec
Q 018464 170 IFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVVQ 236 (355)
Q Consensus 170 IllTHdwP~gi~~~g~~~~l~~~kp~f~~~~~~~~lGS~~l~~ll~~lkPrywfsgH~H~~f~a~~~ 236 (355)
|++||-++... +.+.+.+++.+++|...|+||.|...-....
T Consensus 112 i~lsH~P~~~~-------------------------~~~~~~~~~~~~~p~~Ifs~H~H~s~~~~~~ 153 (195)
T cd08166 112 IMLSHVPLLAE-------------------------GGQALKHVVTDLDPDLIFSAHRHKSSIFMYD 153 (195)
T ss_pred eeeeccccccc-------------------------ccHHHHHHHHhcCceEEEEcCccceeeEEee
Confidence 99999988642 2236789999999999999999988766543
No 55
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=98.23 E-value=2.1e-06 Score=78.63 Aligned_cols=67 Identities=24% Similarity=0.176 Sum_probs=45.7
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhcCCCCCCccEEE
Q 018464 1 MRIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIF 80 (355)
Q Consensus 1 mkIlv~GD~HG~ld~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~g~~~~p~pt~f 80 (355)
+||+|+||+||+++++.+.++.+..+ .+.|.+|++||+...... ..+. .+++.. ..+++
T Consensus 1 ~ri~~isDiHg~~~~l~~~l~~~~~~--~~~d~~~~~GD~v~~g~~-~~~~-------------~~~l~~-----~~~~~ 59 (207)
T cd07424 1 GRDFVVGDIHGHYSLLQKALDAVGFD--PARDRLISVGDLIDRGPE-SLAC-------------LELLLE-----PWFHA 59 (207)
T ss_pred CCEEEEECCCCCHHHHHHHHHHcCCC--CCCCEEEEeCCcccCCCC-HHHH-------------HHHHhc-----CCEEE
Confidence 58999999999998887766554221 258999999999753322 1111 233321 25899
Q ss_pred EcCCCCCh
Q 018464 81 IGGNHEAS 88 (355)
Q Consensus 81 I~GNHE~~ 88 (355)
|.||||..
T Consensus 60 v~GNhe~~ 67 (207)
T cd07424 60 VRGNHEQM 67 (207)
T ss_pred eECCChHH
Confidence 99999965
No 56
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=98.18 E-value=0.00018 Score=68.25 Aligned_cols=207 Identities=14% Similarity=0.094 Sum_probs=108.3
Q ss_pred CEEEEEcCCC----------CChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhcC
Q 018464 1 MRIAVEGCMH----------GELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSG 70 (355)
Q Consensus 1 mkIlv~GD~H----------G~ld~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~g 70 (355)
++|+-..|+| |.+..+...++++.++ + +-.++|.+||++......++.. -+.+-+.++
T Consensus 1 ~~il~~nd~~~~~~~~~~~~gG~~rl~~~i~~~r~~-~-~~~l~l~~GD~~~g~~~~~~~~------g~~~~~~l~---- 68 (257)
T cd07406 1 FTILHFNDVYEIAPLDGGPVGGAARFATLRKQLRKE-N-PNTLVLFSGDVLSPSLLSTATK------GKQMVPVLN---- 68 (257)
T ss_pred CeEEEEccceeecccCCCCcCCHHHHHHHHHHHHhc-C-CCEEEEECCCccCCccchhhcC------CccHHHHHH----
Confidence 4788889999 3456666666665544 2 3349999999885432211110 011222221
Q ss_pred CCCCCccEEEEcCCCCCh---hhHHHHhh---CCccCCceEEeCC---------ceEEEEcCEEEEEecCcCCCcccC-C
Q 018464 71 QEVAPIPTIFIGGNHEAS---NYLWELYY---GGWAAPNIYFLGF---------AGVVKFGNIRIGGLSGIYNARHYR-L 134 (355)
Q Consensus 71 ~~~~p~pt~fI~GNHE~~---~~l~el~~---gg~va~NI~yLg~---------~gv~~i~GlrIaGlsGi~~~~~y~-~ 134 (355)
.+. ..+.+.||||.. ..+.+... -.+++.|+++-.. .-+++.+|+|||-+|=........ .
T Consensus 69 --~l~-~d~~~~GNHefd~g~~~l~~~~~~~~~~~L~aNi~~~~~~~~~~~~~~~~i~~~~g~kIgviG~~~~~~~~~~~ 145 (257)
T cd07406 69 --ALG-VDLACFGNHEFDFGEDQLQKRLGESKFPWLSSNVFDATGGGPLPNGKESAIIERAGVKIGLLGLVEEEWLETLT 145 (257)
T ss_pred --hcC-CcEEeecccccccCHHHHHHHHhhCCCCEEEEEEEECCCCcccCCCCCeEEEEECCeEEEEEEEeccccccccc
Confidence 223 247789999974 23333332 2488889876432 356678999998776443321100 0
Q ss_pred CCCCCCCCChhhHhhhhhhhhHHHHHHhccCCCccEEEeCCCCCCCccCCcchhhhhhccchhhcccCCCCCcHHHHHHH
Q 018464 135 GHYERPPYNESTIRSVYHVREYDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLL 214 (355)
Q Consensus 135 ~~~e~~py~~~~~rs~yh~re~dv~~L~~~~~~vDIllTHdwP~gi~~~g~~~~l~~~kp~f~~~~~~~~lGS~~l~~ll 214 (355)
.......|.. ...++ +..+.++.+-..++=|+|||..-. .+ .+++
T Consensus 146 ~~~~~~~~~d-~~~~~----~~~v~~~~~~~~D~iVvl~H~g~~-----~d-------------------------~~la 190 (257)
T cd07406 146 IDPEYVRYRD-YVETA----RELVDELREQGADLIIALTHMRLP-----ND-------------------------KRLA 190 (257)
T ss_pred CCCCcceEcC-HHHHH----HHHHHHHHhCCCCEEEEEeccCch-----hh-------------------------HHHH
Confidence 1111222221 11111 122333443334556788887321 00 1333
Q ss_pred HHh-CCCEEEEeCCCCccceeeccCCCCCeeEEEEccccCCCCCeeEEEeccC
Q 018464 215 EKL-KPSYWFSAHLHCKFAAVVQHGEDSPVTKFLALDKCLPRRKFLQVFEIES 266 (355)
Q Consensus 215 ~~l-kPrywfsgH~H~~f~a~~~~~~~~~~TrFlaL~k~~~~r~~l~a~~i~~ 266 (355)
+++ .-...++||.|..+...+. .|..+ +++..-+++-.++|.-
T Consensus 191 ~~~~~iD~IlgGH~H~~~~~~~~------~t~vv---~~g~~g~~vg~l~l~~ 234 (257)
T cd07406 191 REVPEIDLILGGHDHEYILVQVG------GTPIV---KSGSDFRTVYIITLTY 234 (257)
T ss_pred HhCCCCceEEecccceeEeeeEC------CEEEE---eCCcCcceEEEEEEEE
Confidence 333 3467899999987744332 24333 3344556777777654
No 57
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=98.17 E-value=4.3e-06 Score=79.28 Aligned_cols=79 Identities=28% Similarity=0.376 Sum_probs=47.3
Q ss_pred CEEEEEcCCCCCh--------H---HHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhc
Q 018464 1 MRIAVEGCMHGEL--------D---NVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYS 69 (355)
Q Consensus 1 mkIlv~GD~HG~l--------d---~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~ 69 (355)
|||+.++|+|-.- + ..++.+..+..+ .++|+||++||++...+.... ....|.+++.
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~--~~~D~lli~GDi~d~~~p~~~----------~~~~~~~~l~ 68 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKA--EQIDALLVAGDVFDTANPPAE----------AQELFNAFFR 68 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHH--cCCCEEEECCccCCCCCCCHH----------HHHHHHHHHH
Confidence 9999999999421 1 122222222222 269999999999976543211 1112233333
Q ss_pred CCCCC-CccEEEEcCCCCChhhH
Q 018464 70 GQEVA-PIPTIFIGGNHEASNYL 91 (355)
Q Consensus 70 g~~~~-p~pt~fI~GNHE~~~~l 91 (355)
..... ++|+++|.||||....+
T Consensus 69 ~l~~~~~i~v~~i~GNHD~~~~~ 91 (253)
T TIGR00619 69 NLSDANPIPIVVISGNHDSAQRL 91 (253)
T ss_pred HHHhcCCceEEEEccCCCChhhc
Confidence 33333 48999999999986543
No 58
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=98.15 E-value=8.2e-06 Score=82.51 Aligned_cols=81 Identities=26% Similarity=0.392 Sum_probs=48.6
Q ss_pred CEEEEEcCCCCCh-----------HHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhc
Q 018464 1 MRIAVEGCMHGEL-----------DNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYS 69 (355)
Q Consensus 1 mkIlv~GD~HG~l-----------d~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~ 69 (355)
|||++++|+|-.. ...++.+-.+..+ .++|+||++||++.....+ ..++ ++-|..+.+|.-
T Consensus 4 mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~--~~vD~VLiaGDLFd~~~Ps-~~~~-----~~~~~~lr~~~~ 75 (405)
T TIGR00583 4 IRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKE--QDVDMILLGGDLFHENKPS-RKSL-----YQVLRSLRLYCL 75 (405)
T ss_pred eEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHH--cCCCEEEECCccCCCCCCC-HHHH-----HHHHHHHHHhhc
Confidence 8999999999431 1122222222222 2699999999999754332 1222 233344444321
Q ss_pred CC-----------------------------CCCCccEEEEcCCCCChh
Q 018464 70 GQ-----------------------------EVAPIPTIFIGGNHEASN 89 (355)
Q Consensus 70 g~-----------------------------~~~p~pt~fI~GNHE~~~ 89 (355)
|. ..+.+|++.|.||||.+.
T Consensus 76 g~~p~~~~~Lsd~~~~~~~~~~~~~ny~d~~~~~~iPVf~I~GNHD~p~ 124 (405)
T TIGR00583 76 GDKPCELEFLSDASVVFNQSAFGNVNYEDPNINVAIPVFSIHGNHDDPS 124 (405)
T ss_pred cCCccchhhccchhhhcccccccccccccccccCCCCEEEEcCCCCCcc
Confidence 11 125799999999999985
No 59
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=98.13 E-value=1.1e-05 Score=73.38 Aligned_cols=86 Identities=17% Similarity=0.096 Sum_probs=49.5
Q ss_pred CccEEEEecCccccCCcchhhhccchhhHHh-hhHHHHHhcCCCCCCccEEEEcCCCCChhhHHHHhhCCccCCceEEeC
Q 018464 30 KIDLLLCCGDFQAVRNENDMESLNVPRKYRE-MKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLG 108 (355)
Q Consensus 30 ~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~-~~~f~~y~~g~~~~p~pt~fI~GNHE~~~~l~el~~gg~va~NI~yLg 108 (355)
++|.|+++||++..+...+.. .+..+.+ +..+.+. .....++++|.||||..-.-..... ..+..+.
T Consensus 30 ~~~~lvl~GDi~d~~~~~~~~---~~~~~~~~~~~l~~~----~~~~~~v~~v~GNHD~~~~~~~~~~-----~~~~~~~ 97 (217)
T cd07398 30 EADALYLLGDIFDLWFGDDEV---VPPAAHEVLAALLRL----ADRGTRVYYVPGNHDFLLGDFFAEE-----LGLILLP 97 (217)
T ss_pred CCCEEEEeccEEEEEecCCCC---CChHHHHHHHHHHHH----HHCCCeEEEECCCchHHHHhHHHHH-----cCCEEec
Confidence 689999999999654322211 1111222 1333333 2346789999999986522111111 1223344
Q ss_pred Cce-EEEEcCEEEEEecCcC
Q 018464 109 FAG-VVKFGNIRIGGLSGIY 127 (355)
Q Consensus 109 ~~g-v~~i~GlrIaGlsGi~ 127 (355)
... .++++|.+|...-|-.
T Consensus 98 ~~~~~~~~~g~~~~~~HG~~ 117 (217)
T cd07398 98 DPLVHLELDGKRILLEHGDQ 117 (217)
T ss_pred cceEEEeeCCeEEEEECCCc
Confidence 445 6788999999988854
No 60
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=98.08 E-value=0.00035 Score=67.14 Aligned_cols=112 Identities=17% Similarity=0.068 Sum_probs=62.9
Q ss_pred CEEEEEcCCCCCh---------------------HHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhHH
Q 018464 1 MRIAVEGCMHGEL---------------------DNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYR 59 (355)
Q Consensus 1 mkIlv~GD~HG~l---------------------d~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~ 59 (355)
++|+-++|+||.+ ..+...++++.++ + +--+++-+||++......++. +-.
T Consensus 1 l~il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~~~r~~-~-~~~l~ld~GD~~~gs~~~~~~------~g~ 72 (281)
T cd07409 1 LTILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVKELRAE-N-PNVLFLNAGDAFQGTLWYTLY------KGN 72 (281)
T ss_pred CEEEEeccccccccccCccccccccccccccCCHHHHHHHHHHHHhc-C-CCEEEEeCCCCCCCcchhhhc------CCh
Confidence 5899999999864 3444455554433 2 334666699987543222110 001
Q ss_pred hhhHHHHHhcCCCCCCccEEEEcCCCCCh---hhHHHHh---hCCccCCceEEeCC----------ceEEEEcCEEEEEe
Q 018464 60 EMKSFWKYYSGQEVAPIPTIFIGGNHEAS---NYLWELY---YGGWAAPNIYFLGF----------AGVVKFGNIRIGGL 123 (355)
Q Consensus 60 ~~~~f~~y~~g~~~~p~pt~fI~GNHE~~---~~l~el~---~gg~va~NI~yLg~----------~gv~~i~GlrIaGl 123 (355)
.+-+.+ +.+.+-. ++.||||.. ..+.+.. ...+++.|++.-.. .-+++++|+|||-+
T Consensus 73 ~~~~~l------n~~g~D~-~~lGNHefd~G~~~l~~~~~~~~~p~l~aNv~~~~~~~~~~~~~~p~~i~~~~G~kIgvi 145 (281)
T cd07409 73 ADAEFM------NLLGYDA-MTLGNHEFDDGVEGLAPFLNNLKFPVLSANIDTSNEPPLLDGLLKPSTILTVGGEKIGII 145 (281)
T ss_pred HHHHHH------HhcCCCE-EEeccccccCCHHHHHHHHHhCCCCEEEEeeecCCCccccccccCCeEEEEECCEEEEEE
Confidence 121222 2345554 455899976 2233332 23478888875432 34668899999877
Q ss_pred cCcC
Q 018464 124 SGIY 127 (355)
Q Consensus 124 sGi~ 127 (355)
|=..
T Consensus 146 G~~~ 149 (281)
T cd07409 146 GYTT 149 (281)
T ss_pred EEec
Confidence 6544
No 61
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=98.07 E-value=0.00017 Score=69.53 Aligned_cols=223 Identities=14% Similarity=0.142 Sum_probs=111.0
Q ss_pred CEEEEEcCCCCChH--------------HHHHHHHHHHHhcCCCccEEEEecCccccCCc-chhhhccchhhHHhhhHHH
Q 018464 1 MRIAVEGCMHGELD--------------NVYKTLQYMENINSYKIDLLLCCGDFQAVRNE-NDMESLNVPRKYREMKSFW 65 (355)
Q Consensus 1 mkIlv~GD~HG~ld--------------~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~-~dl~~~~~p~k~~~~~~f~ 65 (355)
++|+.++|+||.+. .+...++++.++ + +-.++|.+||++..... ..+.. -..+-+.+
T Consensus 1 i~il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~-~-~~~l~ld~GD~~~gs~~~s~~~~------g~~~~~~~ 72 (288)
T cd07412 1 VQILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQ-N-PNSLFVSAGDLIGASPFESALLQ------DEPTIEAL 72 (288)
T ss_pred CeEEEEeccccCccCCCCccccccccHHHHHHHHHHHHhc-C-CCeEEEeCCcccccccchhhccc------CCcHHHHH
Confidence 58999999998754 244445554433 2 45699999998743211 11100 00111111
Q ss_pred HHhcCCCCCCccEEEEcCCCCCh---hhHHHHhh-------------------CCccCCceEEeC-------CceEEEEc
Q 018464 66 KYYSGQEVAPIPTIFIGGNHEAS---NYLWELYY-------------------GGWAAPNIYFLG-------FAGVVKFG 116 (355)
Q Consensus 66 ~y~~g~~~~p~pt~fI~GNHE~~---~~l~el~~-------------------gg~va~NI~yLg-------~~gv~~i~ 116 (355)
..+.+- +++.||||.. ..|.+... -.+++.|+++-. ..-+++++
T Consensus 73 ------n~~g~D-a~t~GNHefd~G~~~l~~~~~~~~~~~~~~~~~~~~~~a~fp~l~aNv~~~~~~~~~~~py~i~~~~ 145 (288)
T cd07412 73 ------NAMGVD-ASAVGNHEFDEGYAELLRRINGGCHPTTGCQAGYPFPGANFPYLAANVYDKGTGTPALPPYTIKDVG 145 (288)
T ss_pred ------HhhCCe-eeeecccccccCHHHHHHHHhccCCccccccccccCcCCCCCEEEEeEEecCCCCcccCCEEEEEEC
Confidence 223433 5677999964 33444322 137888988643 34566889
Q ss_pred CEEEEEecCcCCCccc--CCCCCCCCCCChhhHhhhhhhhhHHHHHHhccCCCccEEEeCCCCCCCccCCcchhhhhhcc
Q 018464 117 NIRIGGLSGIYNARHY--RLGHYERPPYNESTIRSVYHVREYDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQ 194 (355)
Q Consensus 117 GlrIaGlsGi~~~~~y--~~~~~e~~py~~~~~rs~yh~re~dv~~L~~~~~~vDIllTHdwP~gi~~~g~~~~l~~~kp 194 (355)
|+|||-+|=......+ .....+..-|.. .+.++ +..+.+|.+-..++=|+|+|.--..-...++
T Consensus 146 G~kIgviGl~~~~~~~~~~~~~~~g~~f~d-~~e~~----~~~v~~lr~~~~D~IIvL~H~G~~~~~~~~~--------- 211 (288)
T cd07412 146 GVKVGFIGAVTKDTPNLVSPDGVAGLEFTD-EVEAI----NAVAPELKAGGVDAIVVLAHEGGSTKGGDDT--------- 211 (288)
T ss_pred CEEEEEEeecCCCccceeccccccCceEcC-HHHHH----HHHHHHHHHCCCCEEEEEeCCCCCCCCCCcc---------
Confidence 9999877654332111 111111222221 11111 1123344432223445679954322111000
Q ss_pred chhhcccCCCCCcHHHHHHHHHhC--CCEEEEeCCCCccceeeccCCCCCeeEEEEccccCCCCCeeEEEeccC
Q 018464 195 YFEKEIQDGTLGSEPAAQLLEKLK--PSYWFSAHLHCKFAAVVQHGEDSPVTKFLALDKCLPRRKFLQVFEIES 266 (355)
Q Consensus 195 ~f~~~~~~~~lGS~~l~~ll~~lk--PrywfsgH~H~~f~a~~~~~~~~~~TrFlaL~k~~~~r~~l~a~~i~~ 266 (355)
.....| ...+++.++. ....++||.|..+..... ....|..+.- +..-+++..++|..
T Consensus 212 ------~~~~~~--~~~~l~~~~~~~iD~IlgGHsH~~~~~~~~---~~~~~~v~q~---g~~g~~vg~i~l~~ 271 (288)
T cd07412 212 ------CSAASG--PIADIVNRLDPDVDVVFAGHTHQAYNCTVP---AGNPRLVTQA---GSYGKAVADVDLTI 271 (288)
T ss_pred ------ccccCh--hHHHHHhhcCCCCCEEEeCccCcccccccc---CcCCEEEEec---ChhhceeEEEEEEE
Confidence 001112 2356666653 589999999988764210 1123444433 34556777776643
No 62
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=98.06 E-value=9.9e-06 Score=82.02 Aligned_cols=79 Identities=16% Similarity=0.177 Sum_probs=46.9
Q ss_pred CEEEEEcCCCCC--h---------HHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhc
Q 018464 1 MRIAVEGCMHGE--L---------DNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYS 69 (355)
Q Consensus 1 mkIlv~GD~HG~--l---------d~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~ 69 (355)
|||+.++|+|-. + ..+.+.+..+-.+ .++|+||++||++...+..... ...+.+|...
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~--~~~D~viIaGDifD~~~p~~~a-------~~~~~~~l~~-- 69 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQE--HQVDAIIVAGDIFDTGSPPSYA-------RELYNRFVVN-- 69 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHh--cCCCEEEECCccccCCCCcHHH-------HHHHHHHHHH--
Confidence 999999999943 1 1112222222122 2699999999998654321100 0112334333
Q ss_pred CCCCCCccEEEEcCCCCChhhH
Q 018464 70 GQEVAPIPTIFIGGNHEASNYL 91 (355)
Q Consensus 70 g~~~~p~pt~fI~GNHE~~~~l 91 (355)
.....+|+++|.||||....+
T Consensus 70 -L~~~~~~v~~I~GNHD~~~~l 90 (407)
T PRK10966 70 -LQQTGCQLVVLAGNHDSVATL 90 (407)
T ss_pred -HHhcCCcEEEEcCCCCChhhh
Confidence 334568999999999987654
No 63
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=98.05 E-value=5.5e-06 Score=76.74 Aligned_cols=67 Identities=21% Similarity=0.243 Sum_probs=46.5
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhcCCCCCCccEEE
Q 018464 1 MRIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIF 80 (355)
Q Consensus 1 mkIlv~GD~HG~ld~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~g~~~~p~pt~f 80 (355)
+||+|+||+||+++++.+.++.+..+ ...|.|||+||+..-... ..++ .+++.. ...++
T Consensus 17 ~ri~vigDIHG~~~~L~~lL~~i~~~--~~~D~li~lGDlvDrGp~-s~~v-------------l~~l~~-----~~~~~ 75 (218)
T PRK11439 17 RHIWLVGDIHGCFEQLMRKLRHCRFD--PWRDLLISVGDLIDRGPQ-SLRC-------------LQLLEE-----HWVRA 75 (218)
T ss_pred CeEEEEEcccCCHHHHHHHHHhcCCC--cccCEEEEcCcccCCCcC-HHHH-------------HHHHHc-----CCceE
Confidence 48999999999999999888776432 247999999999854322 2222 233321 13578
Q ss_pred EcCCCCCh
Q 018464 81 IGGNHEAS 88 (355)
Q Consensus 81 I~GNHE~~ 88 (355)
|.||||..
T Consensus 76 v~GNHE~~ 83 (218)
T PRK11439 76 VRGNHEQM 83 (218)
T ss_pred eeCchHHH
Confidence 99999854
No 64
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=98.01 E-value=0.00014 Score=69.82 Aligned_cols=191 Identities=18% Similarity=0.173 Sum_probs=92.3
Q ss_pred HHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhcCCCCCCccEEEEcCCCCChhh---
Q 018464 14 DNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGGNHEASNY--- 90 (355)
Q Consensus 14 d~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~g~~~~p~pt~fI~GNHE~~~~--- 90 (355)
..+-+.++.+.+... ++|++|+.||+............ .+...+..+.+.+... -..+|++.+.||||....
T Consensus 53 ~l~~s~l~~i~~~~~-~~dfii~tGD~v~h~~~~~~~~~---~~~~~~~~~~~~l~~~-~~~~pv~~~~GNHD~~p~~~~ 127 (296)
T cd00842 53 RLVESALEAIKKNHP-KPDFILWTGDLVRHDVDEQTPET---LVLISISNLTSLLKKA-FPDTPVYPALGNHDSYPVNQF 127 (296)
T ss_pred HHHHHHHHHHHHhCC-CCCEEEEcCCCCCCCchhhchhH---HHHHHHHHHHHHHHHh-CCCCCEEEcCCCCCCCccccc
Confidence 444455555555543 79999999999876533221100 0000122233322211 146799999999998521
Q ss_pred --------HHHHh---hCCccCCc--eEEeCCce--EEE-EcCEEEEEecCcCCCcc--cCCCCCCCCCCChhhHhhhhh
Q 018464 91 --------LWELY---YGGWAAPN--IYFLGFAG--VVK-FGNIRIGGLSGIYNARH--YRLGHYERPPYNESTIRSVYH 152 (355)
Q Consensus 91 --------l~el~---~gg~va~N--I~yLg~~g--v~~-i~GlrIaGlsGi~~~~~--y~~~~~e~~py~~~~~rs~yh 152 (355)
+.+.. .+.|+-.+ -.+. .+| ++. .+|+||.+|...+-... +..+.....| ..+++-+
T Consensus 128 ~~~~~~~~~~~~~~~~w~~~l~~~~~~~~~-~ggYY~~~~~~~l~vI~Lnt~~~~~~~~~~~~~~~~~~--~~Ql~WL-- 202 (296)
T cd00842 128 PPNNSPSWLYDALAELWKSWLPEEAEETFK-KGGYYSVPVKPGLRVISLNTNLYYKKNFWLLGSNETDP--AGQLQWL-- 202 (296)
T ss_pred CCcccccHHHHHHHHHHHhhcCHHHHHHhh-cceEEEEEcCCCeEEEEEeCccccccChhhhccCCCCH--HHHHHHH--
Confidence 11111 11111100 0011 122 234 58999999876542111 0000000001 1222222
Q ss_pred hhhHHHHHHhccCCCccEEEeCCCCCCCccCCcchhhhhhccchhhcccCCCCCcHHHHHHHHHhC--CCEEEEeCCCCc
Q 018464 153 VREYDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLK--PSYWFSAHLHCK 230 (355)
Q Consensus 153 ~re~dv~~L~~~~~~vDIllTHdwP~gi~~~g~~~~l~~~kp~f~~~~~~~~lGS~~l~~ll~~lk--PrywfsgH~H~~ 230 (355)
+..+++..+.... =|+++|-+|....... ....+..+.+|+++.+ ....|+||.|..
T Consensus 203 --~~~L~~a~~~~~~-v~I~~HiPp~~~~~~~------------------~~~~~~~~~~ii~~y~~~i~~~~~GH~H~d 261 (296)
T cd00842 203 --EDELQEAEQAGEK-VWIIGHIPPGVNSYDT------------------LENWSERYLQIINRYSDTIAGQFFGHTHRD 261 (296)
T ss_pred --HHHHHHHHHCCCe-EEEEeccCCCCccccc------------------chHHHHHHHHHHHHHHHhhheeeecccccc
Confidence 1122222221223 3789999886432110 0123566788888887 788999999976
Q ss_pred cceee
Q 018464 231 FAAVV 235 (355)
Q Consensus 231 f~a~~ 235 (355)
.-...
T Consensus 262 ~~~~~ 266 (296)
T cd00842 262 EFRVF 266 (296)
T ss_pred eEEEE
Confidence 44443
No 65
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=98.01 E-value=7.5e-06 Score=77.22 Aligned_cols=73 Identities=14% Similarity=0.149 Sum_probs=47.3
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHHHhc------CCCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhcCCCCC
Q 018464 1 MRIAVEGCMHGELDNVYKTLQYMENIN------SYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVA 74 (355)
Q Consensus 1 mkIlv~GD~HG~ld~i~~~i~~~~~k~------g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~g~~~~ 74 (355)
||++|+||+||.++.+.+.++++.-+. ...-|.||++||+..-.. ...+++ +|+.... .
T Consensus 1 ~~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp-~S~~vl-------------~~~~~~~-~ 65 (245)
T PRK13625 1 MKYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGP-HSLRMI-------------EIVWELV-E 65 (245)
T ss_pred CceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCc-ChHHHH-------------HHHHHHh-h
Confidence 899999999999999888776653211 013489999999986432 222222 2221111 1
Q ss_pred CccEEEEcCCCCCh
Q 018464 75 PIPTIFIGGNHEAS 88 (355)
Q Consensus 75 p~pt~fI~GNHE~~ 88 (355)
+-.+++|.||||..
T Consensus 66 ~~~~~~l~GNHE~~ 79 (245)
T PRK13625 66 KKAAYYVPGNHCNK 79 (245)
T ss_pred CCCEEEEeCccHHH
Confidence 23689999999854
No 66
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=97.96 E-value=7.4e-06 Score=75.98 Aligned_cols=66 Identities=32% Similarity=0.395 Sum_probs=45.2
Q ss_pred EEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhcCCCCCCccEEEE
Q 018464 2 RIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFI 81 (355)
Q Consensus 2 kIlv~GD~HG~ld~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~g~~~~p~pt~fI 81 (355)
||+|+||+||+++++.+.++.+..+ ...|.+||+||+..-.... .+++ +++. . + .+++|
T Consensus 16 ri~visDiHg~~~~l~~~l~~~~~~--~~~d~l~~lGD~vdrG~~~-~~~l-------------~~l~---~-~-~~~~v 74 (218)
T PRK09968 16 HIWVVGDIHGEYQLLQSRLHQLSFC--PETDLLISVGDNIDRGPES-LNVL-------------RLLN---Q-P-WFISV 74 (218)
T ss_pred eEEEEEeccCCHHHHHHHHHhcCCC--CCCCEEEECCCCcCCCcCH-HHHH-------------HHHh---h-C-CcEEE
Confidence 7999999999999988776655322 2589999999998643221 1111 2321 1 1 46899
Q ss_pred cCCCCCh
Q 018464 82 GGNHEAS 88 (355)
Q Consensus 82 ~GNHE~~ 88 (355)
.||||..
T Consensus 75 ~GNHE~~ 81 (218)
T PRK09968 75 KGNHEAM 81 (218)
T ss_pred ECchHHH
Confidence 9999864
No 67
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=97.95 E-value=8.3e-06 Score=78.43 Aligned_cols=69 Identities=26% Similarity=0.288 Sum_probs=47.7
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhcCCCCCCccEEE
Q 018464 1 MRIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIF 80 (355)
Q Consensus 1 mkIlv~GD~HG~ld~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~g~~~~p~pt~f 80 (355)
|++.|+||+||.++++-+.++++.-. ...|.|+++||+..-... .++++ +++... +...++
T Consensus 1 m~~YvIGDIHGc~daL~~LL~~i~f~--~~~D~l~~lGDlVdRGP~-slevL-------------~~l~~l---~~~~~~ 61 (279)
T TIGR00668 1 MATYLIGDLHGCYDELQALLERVEFD--PGQDTLWLTGDLVARGPG-SLEVL-------------RYVKSL---GDAVRL 61 (279)
T ss_pred CcEEEEEcccCCHHHHHHHHHHhCcC--CCCCEEEEeCCccCCCCC-HHHHH-------------HHHHhc---CCCeEE
Confidence 89999999999999998888766422 247999999999865432 22222 232221 223579
Q ss_pred EcCCCCCh
Q 018464 81 IGGNHEAS 88 (355)
Q Consensus 81 I~GNHE~~ 88 (355)
|.||||..
T Consensus 62 VlGNHD~~ 69 (279)
T TIGR00668 62 VLGNHDLH 69 (279)
T ss_pred EEChhHHH
Confidence 99999864
No 68
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=97.87 E-value=2.4e-05 Score=72.14 Aligned_cols=75 Identities=25% Similarity=0.198 Sum_probs=46.7
Q ss_pred EEEcCCCCChHHHHHHHHHHHHh-----cCCCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhcCCCCCCccE
Q 018464 4 AVEGCMHGELDNVYKTLQYMENI-----NSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPT 78 (355)
Q Consensus 4 lv~GD~HG~ld~i~~~i~~~~~k-----~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~g~~~~p~pt 78 (355)
.|+||+||+++++-+.++.+.-. ...+.|.||++||+..-... ..+++ .-+.+......+.+.++
T Consensus 1 ~vi~DIHG~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~-~~~vl---------~~l~~l~~~~~~~~~~v 70 (208)
T cd07425 1 VAIGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPD-VIEIL---------WLLYKLEQEAAKAGGKV 70 (208)
T ss_pred CEEeCccCCHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcC-HHHHH---------HHHHHHHHHHHhcCCeE
Confidence 37999999999888777654210 01258999999999864322 12221 11222211122346789
Q ss_pred EEEcCCCCCh
Q 018464 79 IFIGGNHEAS 88 (355)
Q Consensus 79 ~fI~GNHE~~ 88 (355)
++|.||||..
T Consensus 71 ~~l~GNHE~~ 80 (208)
T cd07425 71 HFLLGNHELM 80 (208)
T ss_pred EEeeCCCcHH
Confidence 9999999965
No 69
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=97.87 E-value=2.2e-05 Score=72.02 Aligned_cols=68 Identities=26% Similarity=0.383 Sum_probs=45.0
Q ss_pred EEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhcCCCCCCccEEEEcC
Q 018464 4 AVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGG 83 (355)
Q Consensus 4 lv~GD~HG~ld~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~g~~~~p~pt~fI~G 83 (355)
.|+||+||+++.+.+.++.+.. .+.|.+|++||+....... .+ +-++... .+..|..+++|.|
T Consensus 1 ~~igDiHg~~~~l~~~l~~~~~---~~~d~li~lGD~vdrg~~~-~~----------~l~~l~~---~~~~~~~~~~l~G 63 (225)
T cd00144 1 YVIGDIHGCLDDLLRLLEKIGF---PPNDKLIFLGDYVDRGPDS-VE----------VIDLLLA---LKILPDNVILLRG 63 (225)
T ss_pred CEEeCCCCCHHHHHHHHHHhCC---CCCCEEEEECCEeCCCCCc-HH----------HHHHHHH---hcCCCCcEEEEcc
Confidence 3799999999888776655432 2689999999998654322 11 1112222 1211678999999
Q ss_pred CCCCh
Q 018464 84 NHEAS 88 (355)
Q Consensus 84 NHE~~ 88 (355)
|||..
T Consensus 64 NHe~~ 68 (225)
T cd00144 64 NHEDM 68 (225)
T ss_pred Cchhh
Confidence 99874
No 70
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=97.87 E-value=0.00018 Score=68.05 Aligned_cols=111 Identities=21% Similarity=0.243 Sum_probs=65.0
Q ss_pred CEEEEEcCCCCChH----------HHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhcC
Q 018464 1 MRIAVEGCMHGELD----------NVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSG 70 (355)
Q Consensus 1 mkIlv~GD~HG~ld----------~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~g 70 (355)
++|+.++|+||.+. .+-..++++.++ +.++++.+||++......++. +-..+-+.+
T Consensus 1 i~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~---~~~l~l~~GD~~~gs~~~~~~------~g~~~~~~l----- 66 (257)
T cd07408 1 ITILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKL---DNDLLVDAGDAIQGLPISDLD------KGETIIKIM----- 66 (257)
T ss_pred CEEEEeccCcccccCCCCccccHHHHHHHHHHHHhc---CCEEEEeCCCcCCCchhhhhc------CCcHHHHHH-----
Confidence 68999999999753 344444444332 568999999997643222111 011121111
Q ss_pred CCCCCccEEEEcCCCCCh---hhHHHHh---hCCccCCceEEeC-------CceEEEEc-CEEEEEecCcC
Q 018464 71 QEVAPIPTIFIGGNHEAS---NYLWELY---YGGWAAPNIYFLG-------FAGVVKFG-NIRIGGLSGIY 127 (355)
Q Consensus 71 ~~~~p~pt~fI~GNHE~~---~~l~el~---~gg~va~NI~yLg-------~~gv~~i~-GlrIaGlsGi~ 127 (355)
..+.+- +++.||||.. ..+.+.. .-.+++.|++... ..-+++.+ |+|||-+|-..
T Consensus 67 -n~~g~d-~~~~GNHefd~G~~~l~~~~~~~~~~~l~aNv~~~~~~~~~~~py~i~~~~~G~kIgviG~~~ 135 (257)
T cd07408 67 -NAVGYD-AVTPGNHEFDYGLDRLKELSKEADFPFLSANVYDNDTGKRVFKPYKIKELGNGVKVGVIGLTT 135 (257)
T ss_pred -HhcCCc-EEccccccccCCHHHHHHHHhhCCCCEEEEEEEEcCCCCcccCCEEEEEcCCCCEEEEEeecC
Confidence 223333 4567999975 2233322 2347889998763 23455778 99998776543
No 71
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=97.87 E-value=4.1e-05 Score=74.16 Aligned_cols=74 Identities=20% Similarity=0.327 Sum_probs=47.9
Q ss_pred EEEEEcCCCCChHHHHHHHHHHHHhcC---CCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhcCCCCCCc-c
Q 018464 2 RIAVEGCMHGELDNVYKTLQYMENINS---YKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPI-P 77 (355)
Q Consensus 2 kIlv~GD~HG~ld~i~~~i~~~~~k~g---~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~g~~~~p~-p 77 (355)
+|+++||+||+++.+-+.++.+.+..+ ...+.+|++||+..-.... .+. -+|.. ......|. .
T Consensus 3 ~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS-~eV----------ld~L~--~l~~~~~~~~ 69 (304)
T cd07421 3 VVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPET-RKV----------IDFLI--SLPEKHPKQR 69 (304)
T ss_pred eEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCH-HHH----------HHHHH--Hhhhcccccc
Confidence 589999999999998888777765522 2467899999998644321 111 11221 11221222 4
Q ss_pred EEEEcCCCCCh
Q 018464 78 TIFIGGNHEAS 88 (355)
Q Consensus 78 t~fI~GNHE~~ 88 (355)
++|+.||||..
T Consensus 70 vv~LrGNHE~~ 80 (304)
T cd07421 70 HVFLCGNHDFA 80 (304)
T ss_pred eEEEecCChHH
Confidence 78999999964
No 72
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=97.86 E-value=0.0022 Score=62.85 Aligned_cols=119 Identities=18% Similarity=0.107 Sum_probs=64.3
Q ss_pred CEEEEEcCCCCChH------HHHHHHHHHHHhc---CCCccEEEEecCccccCCcchhhh--ccchhhHHhhhHHHHHhc
Q 018464 1 MRIAVEGCMHGELD------NVYKTLQYMENIN---SYKIDLLLCCGDFQAVRNENDMES--LNVPRKYREMKSFWKYYS 69 (355)
Q Consensus 1 mkIlv~GD~HG~ld------~i~~~i~~~~~k~---g~~~DllI~~GDf~~~~~~~dl~~--~~~p~k~~~~~~f~~y~~ 69 (355)
++|+-+.|+||.++ .+...++++.++. + +-.+++-+||++.......... ++...+-+.+-+++..
T Consensus 1 l~IlhtnD~Hg~~~~~gg~ar~a~~i~~~r~~~~~~~-~~~l~ldaGD~~qGs~~~~~~~~~~~~~~~G~~~i~~mN~-- 77 (313)
T cd08162 1 LQLLHTSDGESGLLAEDDAPNFSALVNALKDEAAAEY-DNTLTLSSGDNFIPGPFFNASLDPLIYGDPGRADILILNA-- 77 (313)
T ss_pred CeEEEecccccCccccCCHHHHHHHHHHHHHhhhccC-CCeEEEecCccccCchhhhhhccccccccCChHHHHHHhc--
Confidence 57999999999863 3433344443321 3 4569999999764321110000 0000011123333332
Q ss_pred CCCCCCccEEEEcCCCCCh---hhHHHHhh---------CCccCCceEEeC-----------------------CceEEE
Q 018464 70 GQEVAPIPTIFIGGNHEAS---NYLWELYY---------GGWAAPNIYFLG-----------------------FAGVVK 114 (355)
Q Consensus 70 g~~~~p~pt~fI~GNHE~~---~~l~el~~---------gg~va~NI~yLg-----------------------~~gv~~ 114 (355)
+.+ =....||||.. ..|.++.. -.|++.||++-+ ..-+++
T Consensus 78 ----~g~-Da~tlGNHEFD~G~~~L~~~~~~~~~~~~a~fp~l~aNv~~~~~~~~~~~~~~~~~~~~~~~~~~~py~I~e 152 (313)
T cd08162 78 ----LGV-QAIALGNHEFDLGTDELADLIRPSAAGGGAAFPYLSANLDFSGDANLAGLATADGQQAAAIAGKIAKSTVVE 152 (313)
T ss_pred ----cCC-cEEeccccccccCHHHHHHHHHhhcccccCCCCEEEecccccCCcccccccccccccccccccccCCeEEEE
Confidence 222 26789999964 33433332 247889987532 224557
Q ss_pred EcCEEEEEecCcC
Q 018464 115 FGNIRIGGLSGIY 127 (355)
Q Consensus 115 i~GlrIaGlsGi~ 127 (355)
++|+|||-+|-.-
T Consensus 153 ~~G~kIGviGltt 165 (313)
T cd08162 153 VGGEKIGVVGATT 165 (313)
T ss_pred ECCEEEEEEEecc
Confidence 8999998776544
No 73
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=97.86 E-value=0.00052 Score=65.24 Aligned_cols=111 Identities=17% Similarity=0.218 Sum_probs=60.0
Q ss_pred CEEEEEcCCCCChHH----------------------HHHHHHHHHHhcCCCccEEE-EecCccccCCcchhhhccchhh
Q 018464 1 MRIAVEGCMHGELDN----------------------VYKTLQYMENINSYKIDLLL-CCGDFQAVRNENDMESLNVPRK 57 (355)
Q Consensus 1 mkIlv~GD~HG~ld~----------------------i~~~i~~~~~k~g~~~DllI-~~GDf~~~~~~~dl~~~~~p~k 57 (355)
++|+.++|+||.+.. +...++++.++. ..|+|+ .+||++.......+. +
T Consensus 1 l~il~t~D~Hg~~~~~~~~~~~~~~~~~~~~~gG~~r~~~~v~~~~~~~--~~~~l~l~~GD~~~gs~~~~~~------~ 72 (264)
T cd07411 1 LTLLHINDLHGQLIPHYELEPSNLLARVFGMAGGFAHIATLIKRIRAER--NPNTLLLDGGDTWQGSGEALYT------R 72 (264)
T ss_pred CEEEEEcccccCccccccccccccccccccccCcHHHHHHHHHHHHHhc--CCCeEEEeCCCccCCChHHhhc------C
Confidence 478999999997533 222333333321 467774 599998543222111 1
Q ss_pred HHhhhHHHHHhcCCCCCCccEEEEcCCCCCh---hhHHHHh---hCCccCCceEEeC-------CceEEEEcCEEEEEec
Q 018464 58 YREMKSFWKYYSGQEVAPIPTIFIGGNHEAS---NYLWELY---YGGWAAPNIYFLG-------FAGVVKFGNIRIGGLS 124 (355)
Q Consensus 58 ~~~~~~f~~y~~g~~~~p~pt~fI~GNHE~~---~~l~el~---~gg~va~NI~yLg-------~~gv~~i~GlrIaGls 124 (355)
...+-+.+ ..+++- ++. ||||.. ..+.++. .-.+++.|+++-. ..-+++.+|+|||-+|
T Consensus 73 g~~~~~~l------~~~g~d-a~~-GNHefd~g~~~l~~~~~~~~~~~l~aN~~~~~~~~~~~~~~~i~~~~g~kVgviG 144 (264)
T cd07411 73 GQAMVDAL------NALGVD-AMV-GHWEFTYGPERVRELFGRLNWPFLAANVYDDEAGERVFPPYRIKEVGGVKIGVIG 144 (264)
T ss_pred ChhHHHHH------HhhCCe-EEe-cccccccCHHHHHHHHhhCCCCEEEEEEEeCCCCCcccCCEEEEEECCEEEEEEE
Confidence 11122222 223333 333 999965 2233222 2247888987643 1245578999998666
Q ss_pred CcC
Q 018464 125 GIY 127 (355)
Q Consensus 125 Gi~ 127 (355)
-..
T Consensus 145 ~~~ 147 (264)
T cd07411 145 QTF 147 (264)
T ss_pred ecc
Confidence 543
No 74
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=97.84 E-value=1.7e-05 Score=75.68 Aligned_cols=67 Identities=18% Similarity=0.219 Sum_probs=45.9
Q ss_pred EEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhcCCCCCCccEEEEc
Q 018464 3 IAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIG 82 (355)
Q Consensus 3 Ilv~GD~HG~ld~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~g~~~~p~pt~fI~ 82 (355)
+.|+||+||+++++-+.++++... .+.|.||++||+..-...+ +++ .+++.... -.+++|.
T Consensus 1 ~yvIGDIHG~~~~L~~LL~~i~~~--~~~D~Li~lGDlVdRGp~s-~ev-------------l~~l~~l~---~~v~~Vl 61 (257)
T cd07422 1 TYAIGDIQGCYDELQRLLEKINFD--PAKDRLWLVGDLVNRGPDS-LET-------------LRFVKSLG---DSAKTVL 61 (257)
T ss_pred CEEEECCCCCHHHHHHHHHhcCCC--CCCCEEEEecCcCCCCcCH-HHH-------------HHHHHhcC---CCeEEEc
Confidence 479999999999888877665322 2479999999998754322 222 22332222 3578999
Q ss_pred CCCCCh
Q 018464 83 GNHEAS 88 (355)
Q Consensus 83 GNHE~~ 88 (355)
||||..
T Consensus 62 GNHD~~ 67 (257)
T cd07422 62 GNHDLH 67 (257)
T ss_pred CCchHH
Confidence 999875
No 75
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=97.80 E-value=3.7e-05 Score=71.52 Aligned_cols=70 Identities=17% Similarity=0.124 Sum_probs=45.5
Q ss_pred EEEcCCCCChHHHHHHHHHHHHhcC-----CCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhcCCCCCCccE
Q 018464 4 AVEGCMHGELDNVYKTLQYMENINS-----YKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPT 78 (355)
Q Consensus 4 lv~GD~HG~ld~i~~~i~~~~~k~g-----~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~g~~~~p~pt 78 (355)
.|+||+||.++.+.+.++.+..+.. .+.|.||++||+..-...+ .++ .+++..... +-.+
T Consensus 2 ~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~S-~~v-------------l~~l~~l~~-~~~~ 66 (222)
T cd07413 2 DFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEI-REL-------------LEIVKSMVD-AGHA 66 (222)
T ss_pred EEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCCH-HHH-------------HHHHHHhhc-CCCE
Confidence 5899999999999888877643311 1468999999997543221 111 223222221 2368
Q ss_pred EEEcCCCCCh
Q 018464 79 IFIGGNHEAS 88 (355)
Q Consensus 79 ~fI~GNHE~~ 88 (355)
++|.||||..
T Consensus 67 ~~l~GNHE~~ 76 (222)
T cd07413 67 LAVMGNHEFN 76 (222)
T ss_pred EEEEccCcHH
Confidence 9999999964
No 76
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=97.79 E-value=0.00096 Score=64.33 Aligned_cols=193 Identities=16% Similarity=0.107 Sum_probs=97.8
Q ss_pred CEEEEEcCCCCChHH----------HHHHHHHHHHh---cCCCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHH
Q 018464 1 MRIAVEGCMHGELDN----------VYKTLQYMENI---NSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKY 67 (355)
Q Consensus 1 mkIlv~GD~HG~ld~----------i~~~i~~~~~k---~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y 67 (355)
++|+.++|+||.+.. +...++++.++ .+ +--+++-+||++......++..- ..+-+++..
T Consensus 1 ltIl~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~~~-~~~l~ld~GD~~~Gs~~~~~~~g------~~~~~~~n~ 73 (285)
T cd07405 1 ITILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAAQG-GYVLLLSGGDINTGVPESDLQDA------EPDFRGMNL 73 (285)
T ss_pred CEEEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhccC-CCEEEEeCCCcCCCchhHHhcCc------chHHHHHHh
Confidence 579999999997533 34444444332 13 45699999998743322221100 011122222
Q ss_pred hcCCCCCCccEEEEcCCCCCh---hhHHHHhh---CCccCCceEEeC------CceEEEEcCEEEEEecCcCCCccc--C
Q 018464 68 YSGQEVAPIPTIFIGGNHEAS---NYLWELYY---GGWAAPNIYFLG------FAGVVKFGNIRIGGLSGIYNARHY--R 133 (355)
Q Consensus 68 ~~g~~~~p~pt~fI~GNHE~~---~~l~el~~---gg~va~NI~yLg------~~gv~~i~GlrIaGlsGi~~~~~y--~ 133 (355)
+.+- ..+.||||.. ..|.+... -.+++.|+++-. ..-+++++|+|||-+|=......+ .
T Consensus 74 ------~g~D-a~~~GNHEfD~G~~~L~~~~~~~~fp~l~aNv~~~~g~~~~~p~~i~~~~G~kIgviG~t~~~~~~~~~ 146 (285)
T cd07405 74 ------VGYD-AMAVGNHEFDNPLEVLRQQMKWANFPLLSANIYQESGERLFKPYALFDLGGLKIAVIGLTTDDTAKIGN 146 (285)
T ss_pred ------hCCc-EEeecccccccCHHHHHHHHhhCCCCEEEEEEEecCCCCccCCeEEEEECCEEEEEEEecccccccccC
Confidence 3334 3455999976 23333322 347899998752 234567899999877654432221 1
Q ss_pred CCCCCCCCCChhhHhhhhhhhhHHHHHHhccCCCccEEEeCCCCCCCccCCcchhhhhhccchhhcccCCCCCcHHHHHH
Q 018464 134 LGHYERPPYNESTIRSVYHVREYDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQL 213 (355)
Q Consensus 134 ~~~~e~~py~~~~~rs~yh~re~dv~~L~~~~~~vDIllTHdwP~gi~~~g~~~~l~~~kp~f~~~~~~~~lGS~~l~~l 213 (355)
....+...|.. .+.++ +..+..|.+...++=|+|||..=..-...+ .. .+.-.++
T Consensus 147 ~~~~~~~~f~d-~~~~~----~~~v~~lk~~~~D~VI~lsH~G~~~~~~~~-----------------~~---~~~~~~l 201 (285)
T cd07405 147 PAYFEGIEFRP-PIHEA----KEVVPELKQEKPDIVIAATHMGHYDNGEHG-----------------SN---APGDVEM 201 (285)
T ss_pred cCCcCCcEEcC-HHHHH----HHHHHHHHHcCCCEEEEEecccccCCcccc-----------------cc---CchHHHH
Confidence 11111222321 11111 122334443223444678886532111000 00 0111356
Q ss_pred HHHh---CCCEEEEeCCCCccc
Q 018464 214 LEKL---KPSYWFSAHLHCKFA 232 (355)
Q Consensus 214 l~~l---kPrywfsgH~H~~f~ 232 (355)
++++ .....+.||.|..+.
T Consensus 202 A~~~~~~giD~IigGHsH~~~~ 223 (285)
T cd07405 202 ARALPAGGLDLIVGGHSQDPVC 223 (285)
T ss_pred HHhcCCCCCCEEEeCCCCcccc
Confidence 6665 578999999998875
No 77
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=97.77 E-value=0.00035 Score=73.42 Aligned_cols=110 Identities=17% Similarity=0.058 Sum_probs=63.3
Q ss_pred CEEEEEcCCCCChHH---------------------HHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhHH
Q 018464 1 MRIAVEGCMHGELDN---------------------VYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYR 59 (355)
Q Consensus 1 mkIlv~GD~HG~ld~---------------------i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~ 59 (355)
+.|+-+.|+||.+.. +...++++.+++ +--+++-+||++.......+.. -+
T Consensus 1 ltILhtND~Hg~l~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~--~n~l~ldaGD~~~gs~~~~~~~------g~ 72 (550)
T TIGR01530 1 LSIIHINDHHSHLEPEELEIALAGEQLKAAIGGFAALNAEINKLRAES--KNALVLHAGDAIIGTLYFTLFG------GR 72 (550)
T ss_pred CEEEEEccccccccCcccccccCCCccccccCCHHHHHHHHHHHHhhC--CCeEEEECCCCCCCccchhhcC------CH
Confidence 578999999997643 222233333332 4578999999875432221100 01
Q ss_pred hhhHHHHHhcCCCCCCccEEEEcCCCCCh---hhHHHHhh---CCccCCceEEe---------CCceEEEEcCEEEEEec
Q 018464 60 EMKSFWKYYSGQEVAPIPTIFIGGNHEAS---NYLWELYY---GGWAAPNIYFL---------GFAGVVKFGNIRIGGLS 124 (355)
Q Consensus 60 ~~~~f~~y~~g~~~~p~pt~fI~GNHE~~---~~l~el~~---gg~va~NI~yL---------g~~gv~~i~GlrIaGls 124 (355)
.+-+++.. +. .-.++.||||.. ..|.++.. -.|++.||++- ...-+++++|+|||-+|
T Consensus 73 ~~i~~~N~------~g-~Da~~lGNHEFd~G~~~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~~p~~i~~~~g~kIgiiG 145 (550)
T TIGR01530 73 ADAALMNA------AG-FDFFTLGNHEFDAGNEGLKEFLEPLEIPVLSANVIPDAASILHGKWKPSAIFERAGEKIAIIG 145 (550)
T ss_pred HHHHHHhc------cC-CCEEEeccccccCCHHHHHHHHHhCCCCEEEEeeecCCCcccccCcCceEEEEECCeEEEEEE
Confidence 12222211 12 347889999975 23444332 34889998743 23456688999998665
Q ss_pred C
Q 018464 125 G 125 (355)
Q Consensus 125 G 125 (355)
=
T Consensus 146 l 146 (550)
T TIGR01530 146 L 146 (550)
T ss_pred e
Confidence 4
No 78
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=97.76 E-value=0.00058 Score=77.67 Aligned_cols=191 Identities=20% Similarity=0.186 Sum_probs=99.6
Q ss_pred CEEEEEcCCCCCh---HHHHHHHHHHHHhcCCCccEEEE-ecCccccCCcchhhhccchhhHHhhhHHHHHhcCCCCCCc
Q 018464 1 MRIAVEGCMHGEL---DNVYKTLQYMENINSYKIDLLLC-CGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPI 76 (355)
Q Consensus 1 mkIlv~GD~HG~l---d~i~~~i~~~~~k~g~~~DllI~-~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~g~~~~p~ 76 (355)
++|+.++|+||.+ ..+...++++.++ ..|+|++ +||++.......+. +...+-+++. .+.
T Consensus 661 l~Il~~nD~Hg~l~g~~r~~~~i~~~r~~---~~~~l~ld~GD~~~gs~~~~~~------~g~~~~~~ln------~lg- 724 (1163)
T PRK09419 661 LTILHTNDFHGHLDGAAKRVTKIKEVKEE---NPNTILVDAGDVYQGSLYSNLL------KGLPVLKMMK------EMG- 724 (1163)
T ss_pred EEEEEEeecccCCCCHHHHHHHHHHHHhh---CCCeEEEecCCCCCCcchhhhc------CChHHHHHHh------CcC-
Confidence 4799999999875 4555555555443 3577766 99987543211110 1112222222 122
Q ss_pred cEEEEcCCCCCh---hhHHHHhh---------------CCccCCceEEeC---------CceEEEEcCEEEEEecCcCCC
Q 018464 77 PTIFIGGNHEAS---NYLWELYY---------------GGWAAPNIYFLG---------FAGVVKFGNIRIGGLSGIYNA 129 (355)
Q Consensus 77 pt~fI~GNHE~~---~~l~el~~---------------gg~va~NI~yLg---------~~gv~~i~GlrIaGlsGi~~~ 129 (355)
.-+++.||||.. ..+.+... -.|++.||++-. ..-+++++|+|||.+|=+...
T Consensus 725 ~d~~~~GNHEfd~g~~~l~~~l~~~~~~~~~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~I~e~~G~kIgiiGltt~~ 804 (1163)
T PRK09419 725 YDASTFGNHEFDWGPDVLPDWLKGGGDPKNRHQFEKPDFPFVASNIYVKKTGKLVSWAKPYILVEVNGKKVGFIGLTTPE 804 (1163)
T ss_pred CCEEEecccccccChHHHHHHHHhcccccccccccCCCCCEEEEEEEeCCCCccccccCCEEEEEECCEEEEEEEecccc
Confidence 236689999954 33333221 147899998632 335567899999877654332
Q ss_pred cccC-C-CCCCCCCCChhhHhhhhhhhhHHHHHHhccCCCcc--EEEeCCCCCCCccCCcchhhhhhccchhhcccCCCC
Q 018464 130 RHYR-L-GHYERPPYNESTIRSVYHVREYDVHKLMQIEEPID--IFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTL 205 (355)
Q Consensus 130 ~~y~-~-~~~e~~py~~~~~rs~yh~re~dv~~L~~~~~~vD--IllTHdwP~gi~~~g~~~~l~~~kp~f~~~~~~~~l 205 (355)
.... . .+....-|.. .+.++ +..+.+|.. ..++| |+|||..-.. -. ..
T Consensus 805 ~~~~~~p~~~~~l~f~d-~~e~~----~~~v~~Lr~-~~~~D~VV~LsH~G~~~---d~-------------------~~ 856 (1163)
T PRK09419 805 TAYKTSPGNVKNLEFKD-PAEAA----KKWVKELKE-KEKVDAIIALTHLGSNQ---DR-------------------TT 856 (1163)
T ss_pred cccccCCCCcCCcEEcC-HHHHH----HHHHHHHHh-hcCCCEEEEEecCCccc---cc-------------------cc
Confidence 1111 1 1111222321 11111 122334431 13455 7889975321 00 01
Q ss_pred CcHHHHHHHHHh-CCCEEEEeCCCCccceee
Q 018464 206 GSEPAAQLLEKL-KPSYWFSAHLHCKFAAVV 235 (355)
Q Consensus 206 GS~~l~~ll~~l-kPrywfsgH~H~~f~a~~ 235 (355)
+.-...+|++++ .-...+.||.|..+...+
T Consensus 857 ~~~~~~~lA~~v~gIDvIigGHsH~~~~~~v 887 (1163)
T PRK09419 857 GEITGLELAKKVKGVDAIISAHTHTLVDKVV 887 (1163)
T ss_pred cccHHHHHHHhCCCCCEEEeCCCCccccccC
Confidence 111245666665 347899999998876543
No 79
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=97.55 E-value=0.0022 Score=61.28 Aligned_cols=189 Identities=11% Similarity=0.124 Sum_probs=98.9
Q ss_pred CccEEEEecCccccCCc-chhhhcc-------chhhHHhhhHHHHHhcCCCCCCccEEEEcCCCCChhhHHH-------H
Q 018464 30 KIDLLLCCGDFQAVRNE-NDMESLN-------VPRKYREMKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWE-------L 94 (355)
Q Consensus 30 ~~DllI~~GDf~~~~~~-~dl~~~~-------~p~k~~~~~~f~~y~~g~~~~p~pt~fI~GNHE~~~~l~e-------l 94 (355)
++.-||+|||....-.. .+..... -...+..+..|..|++... ..+|+..++||||..+.... +
T Consensus 42 ~I~rlIIaGn~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ld~~l~~l~-~~i~V~imPG~~Dp~~~~lPQqplh~~l 120 (257)
T cd07387 42 SIVRLIIAGNSLSKSTQGKDSQTKARYLTKKSSAASVEAVKELDNFLSQLA-SSVPVDLMPGEFDPANHSLPQQPLHRCL 120 (257)
T ss_pred ceEEEEEECCcccccccccchhhhhhccccccchhhHHHHHHHHHHHHhhh-cCCeEEECCCCCCcccccCCCCCCCHHH
Confidence 45679999998764321 1100000 0011333445555554444 36899999999999865421 1
Q ss_pred hhCCccCCceEEeCCceEEEEcCEEEEEecCcCCCcccCCCCCCCCCCChhhHhhhhhhhhHHHHHHhccCCCccEEEeC
Q 018464 95 YYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHKLMQIEEPIDIFLSH 174 (355)
Q Consensus 95 ~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~~e~~py~~~~~rs~yh~re~dv~~L~~~~~~vDIllTH 174 (355)
.....--.|+....+-..++++|+||.|.||-.= .|..+ ..+++. +-..++++++- =|
T Consensus 121 fp~s~~~~~~~~vtNP~~~~i~g~~vLgtsGqni-~Di~k----y~~~~~---------~l~~me~~L~w--------rH 178 (257)
T cd07387 121 FPKSSNYSTLNLVTNPYEFSIDGVRVLGTSGQNV-DDILK----YSSLES---------RLDILERTLKW--------RH 178 (257)
T ss_pred hhcccccCCcEEeCCCeEEEECCEEEEEECCCCH-HHHHH----hCCCCC---------HHHHHHHHHHh--------cc
Confidence 1122122466666666678899999999999531 12111 112211 11112232221 13
Q ss_pred CCCCCCccCCcchhhh---hhccchhhcccCCCCCcHHHHHHHHHhCCCEEEEeCCCCccceeeccCCCCCeeEEEEccc
Q 018464 175 DWPCGITDYGNCKELV---RHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVVQHGEDSPVTKFLALDK 251 (355)
Q Consensus 175 dwP~gi~~~g~~~~l~---~~kp~f~~~~~~~~lGS~~l~~ll~~lkPrywfsgH~H~~f~a~~~~~~~~~~TrFlaL~k 251 (355)
-.|..- |+-... ..+||. -.--|...|+||.|..-...+.. +.++.+|-|++.+
T Consensus 179 laPTaP----DTL~~yP~~~~Dpfv------------------i~~~PhVyf~Gnq~~f~t~~~~~-~~~~~v~lv~vP~ 235 (257)
T cd07387 179 IAPTAP----DTLWCYPFTDRDPFI------------------LEECPHVYFAGNQPKFGTKLVEG-EEGQRVLLVCVPS 235 (257)
T ss_pred cCCCCC----CccccccCCCCCcee------------------ecCCCCEEEeCCCcceeeeEEEc-CCCCeEEEEEeCC
Confidence 344221 111000 012322 12359999999998665555544 3456799999998
Q ss_pred cCCCCCeeEEEecc
Q 018464 252 CLPRRKFLQVFEIE 265 (355)
Q Consensus 252 ~~~~r~~l~a~~i~ 265 (355)
+ .+-.-+-.+|+.
T Consensus 236 F-s~t~~~vlvdl~ 248 (257)
T cd07387 236 F-SKTGTAVLVNLR 248 (257)
T ss_pred c-CcCCEEEEEECC
Confidence 7 344455556553
No 80
>KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones]
Probab=97.55 E-value=0.00086 Score=63.99 Aligned_cols=236 Identities=18% Similarity=0.201 Sum_probs=129.1
Q ss_pred CEEEEEcCC--CCChHHHH--HHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhcCCCCCCc
Q 018464 1 MRIAVEGCM--HGELDNVY--KTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPI 76 (355)
Q Consensus 1 mkIlv~GD~--HG~ld~i~--~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~g~~~~p~ 76 (355)
++++|+||. +|.++.-- ..+..+-++. .+|.||-.||=+......+. ..| +=-..|...|+.- .+-.
T Consensus 44 lsflvvGDwGr~g~~nqs~va~qmg~ige~l--~idfvlS~GDNfYd~G~~~~---~Dp---~Fq~sF~nIYT~p-SLQk 114 (336)
T KOG2679|consen 44 LSFLVVGDWGRRGSFNQSQVALQMGEIGEKL--DIDFVLSTGDNFYDTGLTSE---NDP---RFQDSFENIYTAP-SLQK 114 (336)
T ss_pred eEEEEEcccccCCchhHHHHHHHHHhHHHhc--cceEEEecCCcccccCCCCC---CCh---hHHhhhhhcccCc-cccc
Confidence 478999997 45554422 2344444554 59999999996543221111 111 1124566666542 2445
Q ss_pred cEEEEcCCCCChhhH-HHH------hhCCccCCceEEeCCceEEEEcC--EEEEE---ecCcCCC-cccCCCCCCCCCCC
Q 018464 77 PTIFIGGNHEASNYL-WEL------YYGGWAAPNIYFLGFAGVVKFGN--IRIGG---LSGIYNA-RHYRLGHYERPPYN 143 (355)
Q Consensus 77 pt~fI~GNHE~~~~l-~el------~~gg~va~NI~yLg~~gv~~i~G--lrIaG---lsGi~~~-~~y~~~~~e~~py~ 143 (355)
|.|.|.||||-..-. .++ ....|+|+..||.. +.++++.+ .++.. ++-..+. .+++ + ..|=
T Consensus 115 pWy~vlGNHDyrGnV~AQls~~l~~~d~RW~c~rsf~~~-ae~ve~f~v~~~~f~~d~~~~~~~~~ydw~-~---v~PR- 188 (336)
T KOG2679|consen 115 PWYSVLGNHDYRGNVEAQLSPVLRKIDKRWICPRSFYVD-AEIVEMFFVDTTPFMDDTFTLCTDDVYDWR-G---VLPR- 188 (336)
T ss_pred chhhhccCccccCchhhhhhHHHHhhccceecccHHhhc-ceeeeeeccccccchhhheecccccccccc-c---CChH-
Confidence 999999999875222 111 24569999999885 44555533 33322 2211110 1111 1 1110
Q ss_pred hhhHhhhhhhhhHHHH-HHhccCCCccEEEeCCCCCCCccCCcchhhhhhccchhhcccCCCCCcHHHHHHHHHhCCCEE
Q 018464 144 ESTIRSVYHVREYDVH-KLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYW 222 (355)
Q Consensus 144 ~~~~rs~yh~re~dv~-~L~~~~~~vDIllTHdwP~gi~~~g~~~~l~~~kp~f~~~~~~~~lGS~~l~~ll~~lkPryw 222 (355)
..-+++. ..+++ .|.+...+--|++-|-+=..+..+|++..|- ..+.-|+++.+-...
T Consensus 189 ~~~~~~~----l~~le~~L~~S~a~wkiVvGHh~i~S~~~HG~T~eL~-----------------~~LlPiL~~n~VdlY 247 (336)
T KOG2679|consen 189 VKYLRAL----LSWLEVALKASRAKWKIVVGHHPIKSAGHHGPTKELE-----------------KQLLPILEANGVDLY 247 (336)
T ss_pred HHHHHHH----HHHHHHHHHHhhcceEEEecccceehhhccCChHHHH-----------------HHHHHHHHhcCCcEE
Confidence 0001111 11222 3444556778999999999999999886652 347788899999999
Q ss_pred EEeCCCCccceeeccCCCCCeeEEEEccccCCCCCeeE-EEeccCCCCCceeeeChH
Q 018464 223 FSAHLHCKFAAVVQHGEDSPVTKFLALDKCLPRRKFLQ-VFEIESGQGPYEIQYDEE 278 (355)
Q Consensus 223 fsgH~H~~f~a~~~~~~~~~~TrFlaL~k~~~~r~~l~-a~~i~~~~~~~~~~~d~~ 278 (355)
++||-|+=---. .....+.|+-=+.- + +-|-- -.+-..+++.++++||-+
T Consensus 248 ~nGHDHcLQhis----~~e~~iqf~tSGag-S-kaw~g~~~~~~~~p~~lkF~Ydgq 298 (336)
T KOG2679|consen 248 INGHDHCLQHIS----SPESGIQFVTSGAG-S-KAWRGTDHNPEVNPKELKFYYDGQ 298 (336)
T ss_pred Eecchhhhhhcc----CCCCCeeEEeeCCc-c-cccCCCccCCccChhheEEeeCCC
Confidence 999998531000 11235777744431 1 11111 011012346678888877
No 81
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=97.54 E-value=0.0018 Score=67.37 Aligned_cols=112 Identities=21% Similarity=0.202 Sum_probs=67.9
Q ss_pred CEEEEEcCCCCChH---------------HHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhHHhhhHHH
Q 018464 1 MRIAVEGCMHGELD---------------NVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFW 65 (355)
Q Consensus 1 mkIlv~GD~HG~ld---------------~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~ 65 (355)
++|+-+.|+||.+. .+...++++.++. +-.++|-+||+.......+... +-..+-+.+
T Consensus 27 l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~--~~~llld~GD~~~G~~l~~~~~-----~g~~~~~~m 99 (517)
T COG0737 27 LTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAEN--KNVLLLDAGDLIQGSPLSDYLT-----KGEPTVDLL 99 (517)
T ss_pred EEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhc--CCeEEEeCCcccCCcccccccc-----CCChHHHHH
Confidence 47899999999988 5666666555543 4678999999875533222100 001111112
Q ss_pred HHhcCCCCCCccEEEEcCCCCCh---hhHHHHhh---CCccCCceEEe-C-------CceEEEEcCEEEEEecCc
Q 018464 66 KYYSGQEVAPIPTIFIGGNHEAS---NYLWELYY---GGWAAPNIYFL-G-------FAGVVKFGNIRIGGLSGI 126 (355)
Q Consensus 66 ~y~~g~~~~p~pt~fI~GNHE~~---~~l~el~~---gg~va~NI~yL-g-------~~gv~~i~GlrIaGlsGi 126 (355)
..+++- +...||||.. ..|.+... -.|++.||+.- + ..-+++++|+|||-+|=.
T Consensus 100 ------N~m~yD-a~tiGNHEFd~g~~~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~Py~I~~~~g~KIgiIG~~ 167 (517)
T COG0737 100 ------NALGYD-AMTLGNHEFDYGLEALARLLDEAKFPVLSANVYDKNSTGPPFFKPYAIKEVGGVKIGIIGLT 167 (517)
T ss_pred ------hhcCCc-EEeecccccccCHHHHHHHHhccCCceEEeeeEecCCCCccCcCCeEEEecCCeEEEEEEec
Confidence 223433 5566799986 33444443 24899999876 1 234667899999876633
No 82
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=97.51 E-value=0.00045 Score=61.25 Aligned_cols=98 Identities=16% Similarity=0.009 Sum_probs=55.9
Q ss_pred EEEcCCCCChHHHHH---------------HHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHh
Q 018464 4 AVEGCMHGELDNVYK---------------TLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYY 68 (355)
Q Consensus 4 lv~GD~HG~ld~i~~---------------~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~ 68 (355)
.+++|+|=..+.+.+ .++.+++.-. ++|.||+|||+........ + .+++
T Consensus 2 ~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~d~vi~~GDl~~~~~~~~---------~------~~~l 65 (168)
T cd07390 2 YFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVG-PDDTVYHLGDFSFGGKAGT---------E------LELL 65 (168)
T ss_pred eEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcC-CCCEEEEeCCCCCCCChHH---------H------HHHH
Confidence 578999965554322 2444444433 6899999999986543211 1 1222
Q ss_pred cCCCCCCccEEEEcCCCCChhhHHHHhhCCccCCceEEeCCceEEEEcCEEEEEec
Q 018464 69 SGQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLS 124 (355)
Q Consensus 69 ~g~~~~p~pt~fI~GNHE~~~~l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGls 124 (355)
.+.+.++++|.||||........ . .... ..++.....++++|.+|.-.-
T Consensus 66 ---~~~~~~~~~v~GNHD~~~~~~~~-~-~~~~--~~~~~~~~~~~~~~~~i~l~H 114 (168)
T cd07390 66 ---SRLNGRKHLIKGNHDSSLERKLL-A-FLLK--FESVLQAVRLKIGGRRVYLSH 114 (168)
T ss_pred ---HhCCCCeEEEeCCCCchhhhccc-c-cccc--cceeeeEEEEEECCEEEEEEe
Confidence 22356899999999975322111 0 0001 122444455677889988765
No 83
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=97.49 E-value=0.0024 Score=65.24 Aligned_cols=217 Identities=16% Similarity=0.247 Sum_probs=119.9
Q ss_pred CEEEEEcCCCC-Ch---HHHHH-HHHHHHHhcCCC------ccEEEEecCccc-----cCCcchhhhccchhhHHhhhHH
Q 018464 1 MRIAVEGCMHG-EL---DNVYK-TLQYMENINSYK------IDLLLCCGDFQA-----VRNENDMESLNVPRKYREMKSF 64 (355)
Q Consensus 1 mkIlv~GD~HG-~l---d~i~~-~i~~~~~k~g~~------~DllI~~GDf~~-----~~~~~dl~~~~~p~k~~~~~~f 64 (355)
+++++++|+|= +. ...|. .++-+ +| + +.++||+||.-. ..+..+|.-...+.-|.++..|
T Consensus 226 v~v~~isDih~GSk~F~~~~f~~fi~wl---~g-~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~A~~ 301 (481)
T COG1311 226 VYVALISDIHRGSKEFLEDEFEKFIDWL---NG-PGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEELAEF 301 (481)
T ss_pred eEEEEEeeeecccHHHHHHHHHHHHHHh---cC-CcccccceEEEEEecccccccccccCcccccccccchHHHHHHHHH
Confidence 36899999995 21 22222 23222 23 3 489999999764 3456666555555556666555
Q ss_pred HHHhcCCCCCCccEEEEcCCCCChhhH------HHHhhCCccCCceEEeCCceEEEEcCEEEEEecCcCCCcccCCCCCC
Q 018464 65 WKYYSGQEVAPIPTIFIGGNHEASNYL------WELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYE 138 (355)
Q Consensus 65 ~~y~~g~~~~p~pt~fI~GNHE~~~~l------~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~~e 138 (355)
+.- .- -.+.++.+|||||+...- .++...-....|+.++++-..+.++|..+...+|..- .|-..-
T Consensus 302 L~~---vp-~~I~v~i~PGnhDa~r~a~PQp~~~~~~kslf~~~n~~~v~NP~~~~l~G~~vL~~hG~si-dDii~~--- 373 (481)
T COG1311 302 LDQ---VP-EHIKVFIMPGNHDAVRQALPQPHFPELIKSLFSLNNLLFVSNPALVSLHGVDVLIYHGRSI-DDIIKL--- 373 (481)
T ss_pred Hhh---CC-CCceEEEecCCCCccccccCCCCcchhhcccccccceEecCCCcEEEECCEEEEEecCCCH-HHHHhh---
Confidence 433 22 246789999999987331 1111111234568888888888999999988777431 011000
Q ss_pred CCCCChhhHhhhhhhhhHHHHHHhccCCCccEEEeCCCCCCCccCCcchhhhhhccchhhcccCCCCCcHHHHHHHHHhC
Q 018464 139 RPPYNESTIRSVYHVREYDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLK 218 (355)
Q Consensus 139 ~~py~~~~~rs~yh~re~dv~~L~~~~~~vDIllTHdwP~gi~~~g~~~~l~~~kp~f~~~~~~~~lGS~~l~~ll~~lk 218 (355)
-+.-+.+. ....++.|++.+ |-.|. +|+.-++. |+ .-+.++-.-.
T Consensus 374 vP~~~~~~-------~~~ame~lLk~r--------HlaPt----ygg~~p~a---P~-------------~kD~lVIeev 418 (481)
T COG1311 374 VPGADYDS-------PLKAMEELLKRR--------HLAPT----YGGTLPIA---PE-------------TKDYLVIEEV 418 (481)
T ss_pred CCCCCccc-------hHHHHHHHHHhc--------ccCCC----CCCccccc---cC-------------CcCceeeccC
Confidence 00101100 111233333221 33332 22221111 11 1234555568
Q ss_pred CCEEEEeCCCCccceeeccCCCCCeeEEEEccccCCCCCeeEEEeccCCCCC
Q 018464 219 PSYWFSAHLHCKFAAVVQHGEDSPVTKFLALDKCLPRRKFLQVFEIESGQGP 270 (355)
Q Consensus 219 PrywfsgH~H~~f~a~~~~~~~~~~TrFlaL~k~~~~r~~l~a~~i~~~~~~ 270 (355)
|.+..+||.|...-..+. .-+-++++..-...+|=..++|.+..+.
T Consensus 419 PDv~~~Ghvh~~g~~~y~------gv~~vns~T~q~qTefqk~vni~p~~~~ 464 (481)
T COG1311 419 PDVFHTGHVHKFGTGVYE------GVNLVNSGTWQEQTEFQKMVNINPTPGN 464 (481)
T ss_pred CcEEEEccccccceeEEe------ccceEEeeeecchhccceEEEecCcccc
Confidence 999999999977666553 2466777777666677777777665443
No 84
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=97.42 E-value=0.011 Score=59.60 Aligned_cols=191 Identities=18% Similarity=0.169 Sum_probs=102.5
Q ss_pred CEEEEEcCCCCC-h--HHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhcCCC-CCCc
Q 018464 1 MRIAVEGCMHGE-L--DNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQE-VAPI 76 (355)
Q Consensus 1 mkIlv~GD~HG~-l--d~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~g~~-~~p~ 76 (355)
++.+++||.-+. - ..+-+.+.++.++. ++|+||-+||-+ ...-. .+..| +=...|.+-|+... ...+
T Consensus 27 l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~~--~~~FVls~GDNF-~~Gv~---sv~Dp---~f~~~FE~vY~~~s~~L~~ 97 (394)
T PTZ00422 27 LRFASLGNWGTGSKQQKLVASYLKQYAKNE--RVTFLVSPGSNF-PGGVD---GLNDP---KWKHCFENVYSEESGDMQI 97 (394)
T ss_pred EEEEEEecCCCCchhHHHHHHHHHHHHHhC--CCCEEEECCccc-cCCCC---Cccch---hHHhhHhhhccCcchhhCC
Confidence 478999995543 2 23445566666553 699999999976 32111 11112 11344777776653 2678
Q ss_pred cEEEEcCCCCCh-hhHHHH-----------------------hhCCccCCceEEeCCceEE--------EE--cC--EEE
Q 018464 77 PTIFIGGNHEAS-NYLWEL-----------------------YYGGWAAPNIYFLGFAGVV--------KF--GN--IRI 120 (355)
Q Consensus 77 pt~fI~GNHE~~-~~l~el-----------------------~~gg~va~NI~yLg~~gv~--------~i--~G--lrI 120 (355)
|.+.|.||||-. +...++ ....|..||-||--..... .. .+ +.|
T Consensus 98 Pwy~vLGNHDy~Gn~~AQi~r~~~~y~~~~~~~~~~y~~~~~~~~RW~mP~~yY~~~~~f~~~~~~~~~~~~~~~~~v~f 177 (394)
T PTZ00422 98 PFFTVLGQADWDGNYNAELLKGQNVYLNGHGQTDIEYDSNNDIYPKWIMPNYWYHYFTHFTDTSGPSLLKSGHKDMSVAF 177 (394)
T ss_pred CeEEeCCcccccCCchhhhccccccccccccccccccccccccCCCccCCchhheeeeeeecccccccccccCCCCEEEE
Confidence 999999999853 111111 1246889987773211100 00 11 122
Q ss_pred EEecCcCCCcccCCCCCCCCCCC---hhhHhhhhhhhhHHHHHHhccCCCccEEEeCCCCCCCccCCcchhhhhhccchh
Q 018464 121 GGLSGIYNARHYRLGHYERPPYN---ESTIRSVYHVREYDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFE 197 (355)
Q Consensus 121 aGlsGi~~~~~y~~~~~e~~py~---~~~~rs~yh~re~dv~~L~~~~~~vDIllTHdwP~gi~~~g~~~~l~~~kp~f~ 197 (355)
..+=-.. +. ...||. +.+++.+ +.+++ +.+-..+--|++-|-+-.....+++...|
T Consensus 178 ifiDT~~----l~----~~~~~~~~~~~~w~~L----~~~L~-~a~k~a~WkIVvGHhPIySsG~hg~~~~L-------- 236 (394)
T PTZ00422 178 IFIDTWI----LS----SSFPYKKVSERAWQDL----KATLE-YAPKIADYIIVVGDKPIYSSGSSKGDSYL-------- 236 (394)
T ss_pred EEEECch----hc----ccCCccccCHHHHHHH----HHHHH-hhccCCCeEEEEecCceeecCCCCCCHHH--------
Confidence 2221100 00 011221 1112111 11111 11112355699999999888766543322
Q ss_pred hcccCCCCCcHHHHHHHHHhCCCEEEEeCCCCc
Q 018464 198 KEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCK 230 (355)
Q Consensus 198 ~~~~~~~lGS~~l~~ll~~lkPrywfsgH~H~~ 230 (355)
...+..|+++.+=...||||.|+.
T Consensus 237 ---------~~~L~PLL~ky~VdlYisGHDH~l 260 (394)
T PTZ00422 237 ---------SYYLLPLLKDAQVDLYISGYDRNM 260 (394)
T ss_pred ---------HHHHHHHHHHcCcCEEEEccccce
Confidence 125778899999999999999965
No 85
>TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family. This model describes a small collection of probable metallophosphoresterases, related to pfam00149 but with long inserts separating some of the shared motifs such that the homology is apparent only through multiple sequence alignment. Members of this protein family, in general, have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. Members include YP_056203.1 from Propionibacterium acnes KPA171202.
Probab=97.41 E-value=0.013 Score=60.41 Aligned_cols=56 Identities=13% Similarity=0.175 Sum_probs=32.8
Q ss_pred CCCccEEEeCCCCCCCcc-CCcchhhhhhccchhhcccCCCCCcHHHHHHHHHh-CCCEEEEeCCCCcc
Q 018464 165 EEPIDIFLSHDWPCGITD-YGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKL-KPSYWFSAHLHCKF 231 (355)
Q Consensus 165 ~~~vDIllTHdwP~gi~~-~g~~~~l~~~kp~f~~~~~~~~lGS~~l~~ll~~l-kPrywfsgH~H~~f 231 (355)
..+-=|+++|-+|..... ..| ++.. .........+.++++.. +-+.|||||.|...
T Consensus 336 ~~k~VVVf~HHPp~s~g~~~~D--------p~~p---g~~~~n~~eLldLL~~ypnV~aVfsGHvH~n~ 393 (496)
T TIGR03767 336 SDTLFVLFSHHTSWSMVNELTD--------PVDP---GEKRHLGTELVSLLLEHPNVLAWVNGHTHSNK 393 (496)
T ss_pred CCCCEEEEECCCCccccccccc--------cccc---cccccCHHHHHHHHhcCCCceEEEECCcCCCc
Confidence 345578999998865421 111 0000 00122345577777776 67889999999665
No 86
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=97.37 E-value=0.0039 Score=65.53 Aligned_cols=112 Identities=17% Similarity=0.112 Sum_probs=63.4
Q ss_pred CEEEEEcCCCCChHH----------HHHHHHHHHHh---cCCCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHH
Q 018464 1 MRIAVEGCMHGELDN----------VYKTLQYMENI---NSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKY 67 (355)
Q Consensus 1 mkIlv~GD~HG~ld~----------i~~~i~~~~~k---~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y 67 (355)
+.|+-+.|+||.+.. +-..|+++.++ .+ +--+++-+||++......++.. -+.+-+++
T Consensus 35 ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~-~~~l~ldaGD~~~Gs~~s~~~~------g~~~i~~m-- 105 (551)
T PRK09558 35 ITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEG-GSVLLLSGGDINTGVPESDLQD------AEPDFRGM-- 105 (551)
T ss_pred EEEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccC-CCEEEEcCCccccceEhhhhcC------CchhHHHH--
Confidence 468999999998742 22223333221 13 4568999999875432222110 00122222
Q ss_pred hcCCCCCCccEEEEcCCCCCh---hhHHHHhh---CCccCCceEEeC-------CceEEEEcCEEEEEecCc
Q 018464 68 YSGQEVAPIPTIFIGGNHEAS---NYLWELYY---GGWAAPNIYFLG-------FAGVVKFGNIRIGGLSGI 126 (355)
Q Consensus 68 ~~g~~~~p~pt~fI~GNHE~~---~~l~el~~---gg~va~NI~yLg-------~~gv~~i~GlrIaGlsGi 126 (355)
..+.+- +++.||||.. ..|.++.. -.|++.||++-. ..-+++++|+|||.+|=.
T Consensus 106 ----N~~g~D-a~tlGNHEFD~G~~~L~~~~~~a~fp~l~aNv~~~~~g~~~~~py~i~~~~G~kIgiiG~~ 172 (551)
T PRK09558 106 ----NLIGYD-AMAVGNHEFDNPLSVLRKQEKWAKFPFLSANIYQKSTGERLFKPYAIFDRQGLKIAVIGLT 172 (551)
T ss_pred ----hcCCCC-EEcccccccCcCHHHHHHhhccCCCCEEEEEEEECCCCCcccCCeEEEEECCEEEEEEEEe
Confidence 223433 4556999975 33444432 248999998643 234557899999977654
No 87
>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism]
Probab=97.34 E-value=0.0026 Score=64.77 Aligned_cols=187 Identities=20% Similarity=0.201 Sum_probs=99.9
Q ss_pred EEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhcCCCCCCccEEEE
Q 018464 2 RIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFI 81 (355)
Q Consensus 2 kIlv~GD~HG~ld~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~g~~~~p~pt~fI 81 (355)
+++|.||.--.-.. ........++. ++|++|++|||.-...... +.-.+|.+.+.- ..+-+|..++
T Consensus 149 ~~~i~GDlG~~~~~--~s~~~~~~~~~-k~d~vlhiGDlsYa~~~~n----------~~wD~f~r~vEp-~As~vPymv~ 214 (452)
T KOG1378|consen 149 RAAIFGDMGCTEPY--TSTLRNQEENL-KPDAVLHIGDLSYAMGYSN----------WQWDEFGRQVEP-IASYVPYMVC 214 (452)
T ss_pred eEEEEccccccccc--cchHhHHhccc-CCcEEEEecchhhcCCCCc----------cchHHHHhhhhh-hhccCceEEe
Confidence 67888886532211 11222233333 7999999999975332210 112333333322 2356899999
Q ss_pred cCCCCChhh----HHH-------HhhCCccCCceEEeCCceEEEEcCEEEEEecCcCCCcccCCCCCCCCCCChhhHhhh
Q 018464 82 GGNHEASNY----LWE-------LYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSV 150 (355)
Q Consensus 82 ~GNHE~~~~----l~e-------l~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~~e~~py~~~~~rs~ 150 (355)
.||||-... +.. -..+++-..|+||- +.+++++|.++|.-. +| + -.++..+
T Consensus 215 ~GNHE~d~~~~~~F~~y~~Rf~mP~~~s~s~~~l~YS-----fd~G~vhfv~lsse~---~~--~---~~~~~~Q----- 276 (452)
T KOG1378|consen 215 SGNHEIDWPPQPCFVPYSARFNMPGNSSESDSNLYYS-----FDVGGVHFVVLSTET---YY--N---FLKGTAQ----- 276 (452)
T ss_pred cccccccCCCcccccccceeeccCCCcCCCCCceeEE-----EeeccEEEEEEeccc---cc--c---ccccchH-----
Confidence 999987532 100 00122323346663 678999999988643 22 1 1112111
Q ss_pred hhhhhHHHHHHhccCCCccEEEeCCCCCCCccCCcchhhhhhccchhhcccCCCCCc--HHHHHHHHHhCCCEEEEeCCC
Q 018464 151 YHVREYDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGS--EPAAQLLEKLKPSYWFSAHLH 228 (355)
Q Consensus 151 yh~re~dv~~L~~~~~~vDIllTHdwP~gi~~~g~~~~l~~~kp~f~~~~~~~~lGS--~~l~~ll~~lkPrywfsgH~H 228 (355)
|.-=+.|+.+..+.+.+==|++-|-+=..-.. +. . ...+...+ ..+++|+-+.+=...|+||.|
T Consensus 277 Y~WL~~dL~~v~r~~tPWlIv~~HrP~Y~S~~--~~--~----------~reG~~~~~~~~LE~l~~~~~VDvvf~GHvH 342 (452)
T KOG1378|consen 277 YQWLERDLASVDRKKTPWLIVQGHRPMYCSSN--DA--H----------YREGEFESMREGLEPLFVKYKVDVVFWGHVH 342 (452)
T ss_pred HHHHHHHHHHhcccCCCeEEEEecccceecCC--ch--h----------hccCcchhhHHHHHHHHHHhceeEEEeccce
Confidence 22123444444333346677777765433221 00 1 11122222 369999999999999999999
Q ss_pred C--cccee
Q 018464 229 C--KFAAV 234 (355)
Q Consensus 229 ~--~f~a~ 234 (355)
. ++.+.
T Consensus 343 ~YER~~pi 350 (452)
T KOG1378|consen 343 RYERFCPI 350 (452)
T ss_pred ehhccchh
Confidence 3 34444
No 88
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=97.33 E-value=0.00053 Score=60.96 Aligned_cols=72 Identities=18% Similarity=0.259 Sum_probs=41.3
Q ss_pred EEEcCCCCChH----------------HHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHH
Q 018464 4 AVEGCMHGELD----------------NVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKY 67 (355)
Q Consensus 4 lv~GD~HG~ld----------------~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y 67 (355)
|+++|+|=..+ .+++++.++-++. ++|.||++||++........ ..+.... +.
T Consensus 1 l~isDlHlG~~~~~~~~g~~~p~~~~~~~~~~l~~~~~~~--~~d~lii~GDl~~~~~~~~~------~~~~~~~-~~-- 69 (172)
T cd07391 1 LVVADLHLGKEEELRRRGILLPRGQTEDTLERLDRLIEEY--GPERLIILGDLKHSFGGLSR------QEFEEVA-FL-- 69 (172)
T ss_pred CEeEeeccchHHHHHhcCCcCCcccHHHHHHHHHHHHHhc--CCCEEEEeCcccccccccCH------HHHHHHH-HH--
Confidence 57888884332 2344444444433 68999999999854322110 0011111 11
Q ss_pred hcCCCCCCccEEEEcCCCCCh
Q 018464 68 YSGQEVAPIPTIFIGGNHEAS 88 (355)
Q Consensus 68 ~~g~~~~p~pt~fI~GNHE~~ 88 (355)
......+++++|.||||..
T Consensus 70 --~~~~~~~~v~~i~GNHD~~ 88 (172)
T cd07391 70 --RLLAKDVDVILIRGNHDGG 88 (172)
T ss_pred --HhccCCCeEEEEcccCccc
Confidence 1234578999999999864
No 89
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=97.28 E-value=0.00048 Score=66.14 Aligned_cols=72 Identities=18% Similarity=0.289 Sum_probs=47.4
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhcCCCCCCccEEE
Q 018464 1 MRIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIF 80 (355)
Q Consensus 1 mkIlv~GD~HG~ld~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~g~~~~p~pt~f 80 (355)
++|.|+||+||+++.+.+.++.... .+.|-++++||+..-. ...++.+. +...+ ....|-.++.
T Consensus 28 ~~i~vvGDiHG~~~~l~~ll~~~~~---~~~~~~vfLGD~VDrG-~~s~e~l~----------~l~~l--k~~~p~~v~l 91 (271)
T smart00156 28 APVTVCGDIHGQFDDLLRLFDLNGP---PPDTNYVFLGDYVDRG-PFSIEVIL----------LLFAL--KILYPNRVVL 91 (271)
T ss_pred CCEEEEEeCcCCHHHHHHHHHHcCC---CCCceEEEeCCccCCC-CChHHHHH----------HHHHH--HhcCCCCEEE
Confidence 4789999999999988776643321 2578999999998643 22232221 11111 2234667899
Q ss_pred EcCCCCCh
Q 018464 81 IGGNHEAS 88 (355)
Q Consensus 81 I~GNHE~~ 88 (355)
+.||||..
T Consensus 92 lrGNHE~~ 99 (271)
T smart00156 92 LRGNHESR 99 (271)
T ss_pred EeccccHH
Confidence 99999986
No 90
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=97.20 E-value=0.001 Score=62.14 Aligned_cols=71 Identities=21% Similarity=0.293 Sum_probs=42.5
Q ss_pred EEEEEcCCCCChH----------------HHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhHHhhhHHH
Q 018464 2 RIAVEGCMHGELD----------------NVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFW 65 (355)
Q Consensus 2 kIlv~GD~HG~ld----------------~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~ 65 (355)
+.||++|+|=..+ ++.+++..+-++. ++|.||++||++...... ..++++.+|.
T Consensus 16 ~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~--~~d~vIi~GDl~h~~~~~--------~~~~~~~~~l 85 (225)
T TIGR00024 16 DKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKY--GIEALIINGDLKHEFKKG--------LEWRFIREFI 85 (225)
T ss_pred CeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhc--CCCEEEEcCccccccCCh--------HHHHHHHHHH
Confidence 5799999993221 2333333333332 599999999998543221 1133344333
Q ss_pred HHhcCCCCCCccEEEEcCCCCCh
Q 018464 66 KYYSGQEVAPIPTIFIGGNHEAS 88 (355)
Q Consensus 66 ~y~~g~~~~p~pt~fI~GNHE~~ 88 (355)
+- ...++++|.||||..
T Consensus 86 ~~------~~~~v~~V~GNHD~~ 102 (225)
T TIGR00024 86 EV------TFRDLILIRGNHDAL 102 (225)
T ss_pred Hh------cCCcEEEECCCCCCc
Confidence 22 235899999999854
No 91
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=97.15 E-value=0.00076 Score=65.89 Aligned_cols=70 Identities=20% Similarity=0.318 Sum_probs=45.9
Q ss_pred EEEEEcCCCCChHHHHHHHHHHHHhcC-CCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhcCCCCCCccEEE
Q 018464 2 RIAVEGCMHGELDNVYKTLQYMENINS-YKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIF 80 (355)
Q Consensus 2 kIlv~GD~HG~ld~i~~~i~~~~~k~g-~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~g~~~~p~pt~f 80 (355)
+|.|+||+||+++.+.+.++. .| .+.|-+|++||+..-.. .-++.+ ...+.-....|--++.
T Consensus 44 ~i~ViGDIHG~~~dL~~l~~~----~g~~~~~~ylFLGDyVDRG~-~s~Evi------------~lL~~lki~~p~~v~l 106 (305)
T cd07416 44 PVTVCGDIHGQFYDLLKLFEV----GGSPANTRYLFLGDYVDRGY-FSIECV------------LYLWALKILYPKTLFL 106 (305)
T ss_pred CEEEEEeCCCCHHHHHHHHHh----cCCCCCceEEEECCccCCCC-ChHHHH------------HHHHHHHhhcCCCEEE
Confidence 589999999999988765543 22 24689999999985432 222222 1111112334667899
Q ss_pred EcCCCCCh
Q 018464 81 IGGNHEAS 88 (355)
Q Consensus 81 I~GNHE~~ 88 (355)
+.||||..
T Consensus 107 LRGNHE~~ 114 (305)
T cd07416 107 LRGNHECR 114 (305)
T ss_pred EeCCCcHH
Confidence 99999975
No 92
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=97.14 E-value=0.00072 Score=66.51 Aligned_cols=60 Identities=15% Similarity=0.146 Sum_probs=42.0
Q ss_pred CCCcHHHHHHHHHhCCCEEEEeCCC--CccceeeccCCCCCeeEEEEccccCCCCCeeEEEeccC
Q 018464 204 TLGSEPAAQLLEKLKPSYWFSAHLH--CKFAAVVQHGEDSPVTKFLALDKCLPRRKFLQVFEIES 266 (355)
Q Consensus 204 ~lGS~~l~~ll~~lkPrywfsgH~H--~~f~a~~~~~~~~~~TrFlaL~k~~~~r~~l~a~~i~~ 266 (355)
.-|..++.+.+++.+=++.+=||-- ..|.. .+ +..-.|-|=|-.-|+.....-.++.|..
T Consensus 250 ~FG~~~~~~Fl~~n~l~~IIR~He~v~~G~~~--~~-~~~~iTvFSa~nY~~~~~N~gavl~i~~ 311 (321)
T cd07420 250 YFGPDVTSKVLQKHGLSLLIRSHECKPEGYEF--CH-NNKVITIFSASNYYEEGSNRGAYIKLGP 311 (321)
T ss_pred ccCHHHHHHHHHHCCCcEEEEcChhhhcceEE--ec-CCeEEEEecCCccCCCCCccEEEEEECC
Confidence 4588999999999999999999963 33432 22 2345788888777775445556666654
No 93
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.12 E-value=0.0025 Score=59.80 Aligned_cols=108 Identities=19% Similarity=0.171 Sum_probs=66.8
Q ss_pred EEEcCCCCC-----hHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhcCCCCCCccE
Q 018464 4 AVEGCMHGE-----LDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPT 78 (355)
Q Consensus 4 lv~GD~HG~-----ld~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~g~~~~p~pt 78 (355)
++++|+|=. +...+ +.-+..+. ...|.|.++||++..+-..+ --|++.+++..=.+-. .....++
T Consensus 1 lFISDlHL~~~~p~~t~~f--l~Fl~~~a-~~ad~lyilGDifd~w~g~~----~~~~~~~~V~~~l~~~---a~~G~~v 70 (237)
T COG2908 1 LFISDLHLGPKRPALTAFF--LDFLREEA-AQADALYILGDIFDGWIGDD----EPPQLHRQVAQKLLRL---ARKGTRV 70 (237)
T ss_pred CeeeccccCCCCcHHHHHH--HHHHHhcc-ccCcEEEEechhhhhhhcCC----cccHHHHHHHHHHHHH---HhcCCeE
Confidence 367888854 22332 22333332 26799999999998765544 1255666653322221 2346799
Q ss_pred EEEcCCCCChhhHHHHhhCCccCCceEEeCCceEEEEcCEEEEEecC
Q 018464 79 IFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSG 125 (355)
Q Consensus 79 ~fI~GNHE~~~~l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsG 125 (355)
|||.||||.. +.+.. + .-+-++..+.+..+++..|.|+.-+.|
T Consensus 71 ~~i~GN~Dfl--l~~~f-~-~~~g~~~l~~~~~~~~l~g~~~Ll~HG 113 (237)
T COG2908 71 YYIHGNHDFL--LGKRF-A-QEAGGMTLLPDPIVLDLYGKRILLAHG 113 (237)
T ss_pred EEecCchHHH--HHHHH-H-hhcCceEEcCcceeeeecCcEEEEEeC
Confidence 9999999833 22221 1 112346667788888999999998888
No 94
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=97.06 E-value=0.021 Score=62.50 Aligned_cols=121 Identities=18% Similarity=0.166 Sum_probs=62.7
Q ss_pred CEEEEEcCCCCChHH----------------HHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccc-----hhhHH
Q 018464 1 MRIAVEGCMHGELDN----------------VYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNV-----PRKYR 59 (355)
Q Consensus 1 mkIlv~GD~HG~ld~----------------i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~-----p~k~~ 59 (355)
++|+-+.|+||.+.. +-..|+++.+++ +--+|+-+||+.......++..-.. |.+-.
T Consensus 40 L~IL~TnDiHg~l~~~dy~~~~~~~~~Glar~AtlI~~~R~e~--~ntlllD~GD~iqGspl~~~~~~~~~~~~~~~~~~ 117 (780)
T PRK09418 40 LRILETSDIHVNLMNYDYYQTKTDNKVGLVQTATLVNKAREEA--KNSVLFDDGDALQGTPLGDYVANKINDPKKPVDPS 117 (780)
T ss_pred EEEEEEeecCCCCcCcCccccCCcCCCCHHHHHHHHHHHHHhC--CCeEEEECCCCCCCchHHHHHhhcccccccccccc
Confidence 479999999998632 333344433332 4569999999875432222110000 00000
Q ss_pred hhhHHHHHhcCCCCCCccEEEEcCCCCCh---hhHHHHhhC---CccCCceEEeC-------------CceEEEE-----
Q 018464 60 EMKSFWKYYSGQEVAPIPTIFIGGNHEAS---NYLWELYYG---GWAAPNIYFLG-------------FAGVVKF----- 115 (355)
Q Consensus 60 ~~~~f~~y~~g~~~~p~pt~fI~GNHE~~---~~l~el~~g---g~va~NI~yLg-------------~~gv~~i----- 115 (355)
...-..+.+ ..+. --....||||.. .+|.+...+ .+|+.||+.-. ..-|++.
T Consensus 118 ~~~p~i~~m---N~lg-yDa~tlGNHEFdyG~d~L~~~l~~a~fPvl~ANV~~~~~~~~~~~~~~~~~PY~I~e~~v~~~ 193 (780)
T PRK09418 118 YTHPLYRLM---NLMK-YDVISLGNHEFNYGLDYLNKVISKTEFPVINSNVYKDDKDNNEENDQNYFKPYHVFEKEVEDE 193 (780)
T ss_pred cchHHHHHH---hccC-CCEEeccccccccCHHHHHHHHhhCCCCEEEeeeecccccccccccccccCCEEEEEeeeccc
Confidence 000011111 1122 236789999954 334444432 48999998532 2234443
Q ss_pred ----cCEEEEEecCcC
Q 018464 116 ----GNIRIGGLSGIY 127 (355)
Q Consensus 116 ----~GlrIaGlsGi~ 127 (355)
+|+|||.+|=.-
T Consensus 194 ~G~~~gvKIGiIGltt 209 (780)
T PRK09418 194 SGQKQKVKIGVMGFVP 209 (780)
T ss_pred ccccCCceEEEEEecc
Confidence 589999887543
No 95
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=97.00 E-value=0.0012 Score=64.22 Aligned_cols=60 Identities=20% Similarity=0.225 Sum_probs=40.4
Q ss_pred CCCcHHHHHHHHHhCCCEEEEeCCCC--ccceeeccCCCCCeeEEEEccccCCCCCeeEEEeccC
Q 018464 204 TLGSEPAAQLLEKLKPSYWFSAHLHC--KFAAVVQHGEDSPVTKFLALDKCLPRRKFLQVFEIES 266 (355)
Q Consensus 204 ~lGS~~l~~ll~~lkPrywfsgH~H~--~f~a~~~~~~~~~~TrFlaL~k~~~~r~~l~a~~i~~ 266 (355)
.-|..++.+.+++.+=++.+=||--+ .|+-. + +..-.|-|=|-.-|+....--.++.|+.
T Consensus 219 ~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~--~-~~~~iTvfSa~~Y~~~~~N~~a~l~i~~ 280 (293)
T cd07414 219 TFGKDVVAKFLNKHDLDLICRAHQVVEDGYEFF--A-KRQLVTLFSAPNYCGEFDNAGAMMSVDE 280 (293)
T ss_pred ecCHHHHHHHHHHcCCeEEEECCccccCeEEEe--C-CCcEEEEecCCcccCCCCceEEEEEECC
Confidence 35899999999999999999999643 35432 2 2234677777776664334445555543
No 96
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=96.96 E-value=0.021 Score=65.30 Aligned_cols=196 Identities=13% Similarity=0.089 Sum_probs=97.1
Q ss_pred CEEEEEcCCCCChH----------------HHHHHHHHHHHhcCCCccEEEEecCccccCCcchhh----hccchhhHHh
Q 018464 1 MRIAVEGCMHGELD----------------NVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDME----SLNVPRKYRE 60 (355)
Q Consensus 1 mkIlv~GD~HG~ld----------------~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~----~~~~p~k~~~ 60 (355)
++|+-++|+||.+. .+...|+++.++ + +--++|-+||++......+.. .+. ..+-..
T Consensus 42 l~il~tnD~Hg~l~~~~y~~~~~~~~~Glar~at~i~~~r~~-~-~n~llld~GD~~qGs~l~~~~~~~~~~~-~~~~~~ 118 (1163)
T PRK09419 42 IQILATTDLHGNFMDYDYASDKETTGFGLAQTATLIKKARKE-N-PNTLLVDNGDLIQGNPLGEYAVKDNILF-KNKTHP 118 (1163)
T ss_pred EEEEEEecccccccccccccCCCCCCcCHHHHHHHHHHHHHh-C-CCeEEEeCCCccCCChhhhHHhhhcccc-CCCcCH
Confidence 47999999999753 334445444433 2 334566699987543221110 000 000011
Q ss_pred hhHHHHHhcCCCCCCccEEEEcCCCCCh---hhHHHHhh---CCccCCceEEeC------CceEEEE---------cCEE
Q 018464 61 MKSFWKYYSGQEVAPIPTIFIGGNHEAS---NYLWELYY---GGWAAPNIYFLG------FAGVVKF---------GNIR 119 (355)
Q Consensus 61 ~~~f~~y~~g~~~~p~pt~fI~GNHE~~---~~l~el~~---gg~va~NI~yLg------~~gv~~i---------~Glr 119 (355)
+-+++. .+.+ -.++.||||.. ..|.+... -.++|.||+.-. ...+++. +|+|
T Consensus 119 ~i~~mN------~lgy-Da~~lGNHEFd~G~~~L~~~~~~a~fp~l~aNv~~~~~~~~~~py~I~~~~~~~~~g~~~gvk 191 (1163)
T PRK09419 119 MIKAMN------ALGY-DAGTLGNHEFNYGLDFLDGTIKGANFPVLNANVKYKNGKNVYTPYKIKEKTVTDENGKKQGVK 191 (1163)
T ss_pred HHHHHh------hcCc-cEEeecccccccCHHHHHHHHhcCCCCEEEeeeecCCCCcccCCEEEEEEEeeccCCCCCCeE
Confidence 111111 1222 25678999964 33444432 248899996432 2345666 8999
Q ss_pred EEEecCcCCCc-ccCCCCCCC-CCCChhhHhhhhhhhhHHHHHHhccCCCccEEEeCCCCCCCccCCcchhhhhhccchh
Q 018464 120 IGGLSGIYNAR-HYRLGHYER-PPYNESTIRSVYHVREYDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFE 197 (355)
Q Consensus 120 IaGlsGi~~~~-~y~~~~~e~-~py~~~~~rs~yh~re~dv~~L~~~~~~vDIllTHdwP~gi~~~g~~~~l~~~kp~f~ 197 (355)
||.+|=..... .|...+.+. .-+. +.+.++ +..+.+|.+-..++=|+|||..-..-..
T Consensus 192 IgiiG~~~p~~~~~~~~~~~g~~~~~-d~v~~~----~~~v~~lk~~gaDvII~l~H~G~~~~~~--------------- 251 (1163)
T PRK09419 192 VGYIGFVPPQIMTWDKKNLKGKVEVK-NIVEEA----NKTIPEMKKGGADVIVALAHSGIESEYQ--------------- 251 (1163)
T ss_pred EEEEecCCcchhhcchhhccCcEEEC-CHHHHH----HHHHHHHHhcCCCEEEEEeccCcCCCCC---------------
Confidence 99887553211 111111111 1111 111111 2224444332334447889975321110
Q ss_pred hcccCCCCC-cHHHHHHHHHh-CCCEEEEeCCCCccc
Q 018464 198 KEIQDGTLG-SEPAAQLLEKL-KPSYWFSAHLHCKFA 232 (355)
Q Consensus 198 ~~~~~~~lG-S~~l~~ll~~l-kPrywfsgH~H~~f~ 232 (355)
..| .....+|++++ .-...+.||-|..+.
T Consensus 252 ------~~~~en~~~~la~~~~gID~Il~GHsH~~~~ 282 (1163)
T PRK09419 252 ------SSGAEDSVYDLAEKTKGIDAIVAGHQHGLFP 282 (1163)
T ss_pred ------CCCcchHHHHHHHhCCCCcEEEeCCCccccc
Confidence 012 12345666555 468999999998886
No 97
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=96.94 E-value=0.0016 Score=64.06 Aligned_cols=60 Identities=18% Similarity=0.161 Sum_probs=41.5
Q ss_pred CCCcHHHHHHHHHhCCCEEEEeCCCC--ccceeeccCCCCCeeEEEEccccCCCCCeeEEEeccC
Q 018464 204 TLGSEPAAQLLEKLKPSYWFSAHLHC--KFAAVVQHGEDSPVTKFLALDKCLPRRKFLQVFEIES 266 (355)
Q Consensus 204 ~lGS~~l~~ll~~lkPrywfsgH~H~--~f~a~~~~~~~~~~TrFlaL~k~~~~r~~l~a~~i~~ 266 (355)
.-|..++.+.+++.+=++.+=||--+ .|+.. + +..-.|-|=|-.-|+....--.++.|..
T Consensus 228 ~FG~~~~~~Fl~~n~l~~IiR~Hq~v~~G~~~~--~-~~~~iTvFSa~~Y~~~~~N~ga~l~i~~ 289 (320)
T PTZ00480 228 VFSQEIVQVFLKKHELDLICRAHQVVEDGYEFF--S-KRQLVTLFSAPNYCGEFDNAGSMMTIDE 289 (320)
T ss_pred ccCHHHHHHHHHhCCCcEEEEcCccccCceEEe--C-CCcEEEEeCCcccCCCCCccEEEEEECC
Confidence 36999999999999999999999643 34322 2 2345788887777775444445555543
No 98
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=96.86 E-value=0.0017 Score=62.93 Aligned_cols=70 Identities=19% Similarity=0.242 Sum_probs=45.6
Q ss_pred EEEEEcCCCCChHHHHHHHHHHHHhcC-CCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhcCCCCCCccEEE
Q 018464 2 RIAVEGCMHGELDNVYKTLQYMENINS-YKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIF 80 (355)
Q Consensus 2 kIlv~GD~HG~ld~i~~~i~~~~~k~g-~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~g~~~~p~pt~f 80 (355)
++.|+||+||+++.+.+.+... + .+.+-+|++||+..-. ...++.+ .+...+ ....|-.++.
T Consensus 43 ~i~vvGDIHG~~~dL~~ll~~~----~~~~~~~~lfLGDyVDRG-~~s~evl----------~ll~~l--k~~~p~~v~l 105 (285)
T cd07415 43 PVTVCGDIHGQFYDLLELFRVG----GDPPDTNYLFLGDYVDRG-YYSVETF----------LLLLAL--KVRYPDRITL 105 (285)
T ss_pred CEEEEEeCCCCHHHHHHHHHHc----CCCCCCeEEEEeEECCCC-cCHHHHH----------HHHHHH--hhcCCCcEEE
Confidence 4789999999998887655432 2 2467899999998533 2222222 111111 2234667999
Q ss_pred EcCCCCCh
Q 018464 81 IGGNHEAS 88 (355)
Q Consensus 81 I~GNHE~~ 88 (355)
+.||||..
T Consensus 106 lrGNHE~~ 113 (285)
T cd07415 106 LRGNHESR 113 (285)
T ss_pred EecccchH
Confidence 99999975
No 99
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=96.85 E-value=0.034 Score=59.82 Aligned_cols=116 Identities=17% Similarity=0.113 Sum_probs=62.4
Q ss_pred CEEEEEcCCCCChH----------------HHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhH---Hhh
Q 018464 1 MRIAVEGCMHGELD----------------NVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKY---REM 61 (355)
Q Consensus 1 mkIlv~GD~HG~ld----------------~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~---~~~ 61 (355)
++|+-+.|+||.+. ++-..|+++.+++ +--+++-+||++......+..... +.+. .-+
T Consensus 26 L~IL~TnDlHg~l~~~dy~~~~~~~~~Glar~atli~~~R~e~--~n~llvD~GD~~qGsp~~~~~~~~-~~~~g~~~p~ 102 (649)
T PRK09420 26 LRIMETTDLHSNMMDFDYYKDKPTEKFGLVRTASLIKAARAEA--KNSVLVDNGDLIQGSPLGDYMAAK-GLKAGDVHPV 102 (649)
T ss_pred EEEEEEcccccCccCCccccCCcccccCHHHHHHHHHHHHHhC--CCEEEEECCCcCCCchhhhhhhhc-cccCCCcchH
Confidence 58999999999863 3333444443332 346999999987643322211000 0000 001
Q ss_pred hHHHHHhcCCCCCCccEEEEcCCCCCh---hhHHHHhhC---CccCCceEEeC-------CceEEEE-----c----CEE
Q 018464 62 KSFWKYYSGQEVAPIPTIFIGGNHEAS---NYLWELYYG---GWAAPNIYFLG-------FAGVVKF-----G----NIR 119 (355)
Q Consensus 62 ~~f~~y~~g~~~~p~pt~fI~GNHE~~---~~l~el~~g---g~va~NI~yLg-------~~gv~~i-----~----Glr 119 (355)
-+++.. +. --....||||.. ..|.+...+ .+++.||+... ..-|++. + |+|
T Consensus 103 i~amN~------lg-yDa~tlGNHEFd~G~~~L~~~~~~a~fP~l~ANv~~~~~~~~~~~py~I~e~~v~~~~G~~~~vk 175 (649)
T PRK09420 103 YKAMNT------LD-YDVGNLGNHEFNYGLDYLKKALAGAKFPYVNANVIDAKTGKPLFTPYLIKEKEVKDKDGKEHTIK 175 (649)
T ss_pred HHHHHh------cC-CcEEeccchhhhcCHHHHHHHHhcCCCCEEEEEEEecCCCCcccCCeEEEEEEeeccCCCccceE
Confidence 111111 12 236788999964 344444433 48999997532 2224443 3 599
Q ss_pred EEEecCc
Q 018464 120 IGGLSGI 126 (355)
Q Consensus 120 IaGlsGi 126 (355)
||.+|=.
T Consensus 176 IGiIGl~ 182 (649)
T PRK09420 176 IGYIGFV 182 (649)
T ss_pred EEEEEec
Confidence 9877643
No 100
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=96.85 E-value=0.029 Score=61.61 Aligned_cols=117 Identities=17% Similarity=0.083 Sum_probs=62.7
Q ss_pred CEEEEEcCCCCChH----------------HHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhHH---hh
Q 018464 1 MRIAVEGCMHGELD----------------NVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYR---EM 61 (355)
Q Consensus 1 mkIlv~GD~HG~ld----------------~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~---~~ 61 (355)
++|+-+.|+||.+. ++...|+++.+++ +--+++-+||++......++....-|-+.. -+
T Consensus 116 LtIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae~--~NtLllD~GD~iQGSpl~~~~a~~~~~~~g~~~P~ 193 (814)
T PRK11907 116 VRILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKEN--PNVVLVDNGDTIQGTPLGTYKAIVDPVEEGEQHPM 193 (814)
T ss_pred EEEEEEEeecCCcccccccccCccccccHHHHHHHHHHHHHhC--CCEEEEecCCCCCCCcccchhhhccccccCcchHH
Confidence 47999999999864 3333344443332 446999999987543222221000000000 01
Q ss_pred hHHHHHhcCCCCCCccEEEEcCCCCCh---hhHHHHhhC---CccCCceEEeCC-------ceEEEE-----cC----EE
Q 018464 62 KSFWKYYSGQEVAPIPTIFIGGNHEAS---NYLWELYYG---GWAAPNIYFLGF-------AGVVKF-----GN----IR 119 (355)
Q Consensus 62 ~~f~~y~~g~~~~p~pt~fI~GNHE~~---~~l~el~~g---g~va~NI~yLg~-------~gv~~i-----~G----lr 119 (355)
-+++. .+.+ =....||||.. .+|.+...+ .+|+.||+.... .-|++. +| +|
T Consensus 194 i~amN------~LGy-DA~tLGNHEFDyG~d~L~~~l~~a~fPvl~ANV~~~~~~~~~~~PY~I~e~~~~d~~G~~~~vK 266 (814)
T PRK11907 194 YAALE------ALGF-DAGTLGNHEFNYGLDYLEKVIATANMPIVNANVLDPTTGDFLYTPYTIVTKTFTDTEGKKVTLN 266 (814)
T ss_pred HHHHh------ccCC-CEEEechhhcccCHHHHHHHHHhCCCCEEEeeeeecCCCCccCCCeEEEEEEEecCCCcccceE
Confidence 12221 1222 26788999965 334444332 489999986432 233443 56 89
Q ss_pred EEEecCc
Q 018464 120 IGGLSGI 126 (355)
Q Consensus 120 IaGlsGi 126 (355)
||.+|=.
T Consensus 267 IGiIGlv 273 (814)
T PRK11907 267 IGITGIV 273 (814)
T ss_pred EEEEEeC
Confidence 9877643
No 101
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=96.79 E-value=0.0022 Score=62.64 Aligned_cols=61 Identities=11% Similarity=0.159 Sum_probs=40.2
Q ss_pred CCCcHHHHHHHHHhCCCEEEEeCCCC--ccceeeccCCCCCeeEEEEccccCCCCCeeEEEeccC
Q 018464 204 TLGSEPAAQLLEKLKPSYWFSAHLHC--KFAAVVQHGEDSPVTKFLALDKCLPRRKFLQVFEIES 266 (355)
Q Consensus 204 ~lGS~~l~~ll~~lkPrywfsgH~H~--~f~a~~~~~~~~~~TrFlaL~k~~~~r~~l~a~~i~~ 266 (355)
.-|..++.+.+++.+=++.+=||--+ .|+-.. ++..-.|-|=|-.-|+....-..++.|+.
T Consensus 212 ~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~--~~~~~iTvfSa~~Y~~~~~N~~ail~i~~ 274 (303)
T PTZ00239 212 LFGAKVTKEFCRLNDLTLICRAHQLVMEGYKYWF--PDQNLVTVWSAPNYCYRCGNIASILCLDE 274 (303)
T ss_pred ccCHHHHHHHHHHCCCcEEEEcChhhccceEEEe--CCCeEEEEECCCcccCCCCceEEEEEECC
Confidence 46899999999999999999999643 343222 12223677777766654444445555543
No 102
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=96.75 E-value=0.0027 Score=62.33 Aligned_cols=59 Identities=19% Similarity=0.252 Sum_probs=39.1
Q ss_pred CCCcHHHHHHHHHhCCCEEEEeCCCC--ccceeeccCCCCCeeEEEEccccCCCCCeeEEEecc
Q 018464 204 TLGSEPAAQLLEKLKPSYWFSAHLHC--KFAAVVQHGEDSPVTKFLALDKCLPRRKFLQVFEIE 265 (355)
Q Consensus 204 ~lGS~~l~~ll~~lkPrywfsgH~H~--~f~a~~~~~~~~~~TrFlaL~k~~~~r~~l~a~~i~ 265 (355)
.-|..++.+.+++.+=++.+-||--+ .|+.. + +..-.|-|=|-.-|+.....-.++.|.
T Consensus 230 ~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~--~-~~~~~TvfSa~~Y~~~~~N~ga~~~i~ 290 (316)
T cd07417 230 QFGPDVTKRFLEENNLEYIIRSHEVKDEGYEVE--H-DGKCITVFSAPNYCDQMGNKGAFIRIT 290 (316)
T ss_pred EeCHHHHHHHHHHcCCcEEEECCcccceeEEEe--c-CCeEEEEeCCccccCCCCcceEEEEEe
Confidence 35889999999999999999999643 34332 2 223467777776666433334444444
No 103
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=96.70 E-value=0.0024 Score=62.11 Aligned_cols=59 Identities=19% Similarity=0.212 Sum_probs=40.2
Q ss_pred CCCcHHHHHHHHHhCCCEEEEeCCCC--ccceeeccCCCCCeeEEEEccccCCCCCeeEEEecc
Q 018464 204 TLGSEPAAQLLEKLKPSYWFSAHLHC--KFAAVVQHGEDSPVTKFLALDKCLPRRKFLQVFEIE 265 (355)
Q Consensus 204 ~lGS~~l~~ll~~lkPrywfsgH~H~--~f~a~~~~~~~~~~TrFlaL~k~~~~r~~l~a~~i~ 265 (355)
.-|..++.+.+++.+=++.+=||--+ .|+-. + +..-.|-|=|-.-|+....--.++.|+
T Consensus 221 ~fg~~~~~~Fl~~n~l~~iiR~Hq~~~~G~~~~--~-~~~~iTvfSa~~Y~~~~~N~~a~l~i~ 281 (294)
T PTZ00244 221 LFGEDIVNDFLDMVDMDLIVRAHQVMERGYGFF--A-SRQLVTVFSAPNYCGEFDNDAAVMNID 281 (294)
T ss_pred ccCHHHHHHHHHHcCCcEEEEcCccccCceEEc--C-CCeEEEEeCCccccCCCCceEEEEEEC
Confidence 46899999999999999999999643 34422 2 334577787777776433334555554
No 104
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=96.67 E-value=0.0064 Score=57.20 Aligned_cols=74 Identities=20% Similarity=0.275 Sum_probs=50.1
Q ss_pred EEEEEcCCCCChHHH----------------HHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhHHhhhHHH
Q 018464 2 RIAVEGCMHGELDNV----------------YKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFW 65 (355)
Q Consensus 2 kIlv~GD~HG~ld~i----------------~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~ 65 (355)
+.+|++|+|=.++.- .+.+.++-++. .++.||+.||+........ +....+...|.
T Consensus 21 ~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~--~p~~lIilGD~KH~~~~~~------~~e~~~~~~f~ 92 (235)
T COG1407 21 RTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERY--GPKRLIILGDLKHEFGKSL------RQEKEEVREFL 92 (235)
T ss_pred cEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhc--CCCEEEEcCccccccCccc------cccHHHHHHHH
Confidence 579999999655443 34444444444 5899999999986543311 22234567788
Q ss_pred HHhcCCCCCCccEEEEcCCCCCh
Q 018464 66 KYYSGQEVAPIPTIFIGGNHEAS 88 (355)
Q Consensus 66 ~y~~g~~~~p~pt~fI~GNHE~~ 88 (355)
+++++. -+++|.||||+.
T Consensus 93 ~~~~~~-----evi~i~GNHD~~ 110 (235)
T COG1407 93 ELLDER-----EVIIIRGNHDNG 110 (235)
T ss_pred HHhccC-----cEEEEeccCCCc
Confidence 887554 389999999874
No 105
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=96.66 E-value=0.064 Score=57.45 Aligned_cols=117 Identities=15% Similarity=0.072 Sum_probs=61.9
Q ss_pred CEEEEEcCCCCChHH----------------HHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhH---Hhh
Q 018464 1 MRIAVEGCMHGELDN----------------VYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKY---REM 61 (355)
Q Consensus 1 mkIlv~GD~HG~ld~----------------i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~---~~~ 61 (355)
++|+-+.|+||.+.. +-..|+++.+++ +--+++-+||++......+...-. +-+. .-+
T Consensus 3 l~Il~TnDlH~~l~~~dy~~~~~~~~~Glar~atli~~~R~e~--~n~lllD~GD~~qGsp~~~~~~~~-~~~~~~~~p~ 79 (626)
T TIGR01390 3 LRIVETTDLHTNLMDYDYYKDKPTDKFGLTRTATLIKQARAEV--KNSVLVDNGDLIQGSPLGDYMAAQ-GLKAGQMHPV 79 (626)
T ss_pred EEEEEEcCCccCccCCcccCCCCCCCcCHHHHHHHHHHHHhhC--CCeEEEECCCcCCCccchhhhhhc-cccCCCcChH
Confidence 579999999998742 333344443332 346999999987543222211000 0000 001
Q ss_pred hHHHHHhcCCCCCCccEEEEcCCCCCh---hhHHHHhh---CCccCCceEEeC-------CceEEEE-----c----CEE
Q 018464 62 KSFWKYYSGQEVAPIPTIFIGGNHEAS---NYLWELYY---GGWAAPNIYFLG-------FAGVVKF-----G----NIR 119 (355)
Q Consensus 62 ~~f~~y~~g~~~~p~pt~fI~GNHE~~---~~l~el~~---gg~va~NI~yLg-------~~gv~~i-----~----Glr 119 (355)
-+++ ..+.+ -....||||.. ..|.+... -.+++.||+... ..-|++. + |+|
T Consensus 80 ~~~m------N~lgy-Da~tlGNHEFd~G~~~L~~~~~~a~fP~l~aNv~~~~~~~~~~~py~I~~~~~~~~~G~~~~~k 152 (626)
T TIGR01390 80 YKAM------NLLKY-DVGNLGNHEFNYGLPFLKQAIAAAKFPIVNANVVDAGTGQPAFTPYLIQERSVVDTDGKPHTLK 152 (626)
T ss_pred HHHH------hhcCc-cEEecccccccccHHHHHHHHHhCCCCEEEEEEEeCCCCCcccCCeEEEEEEeeccCCCccceE
Confidence 1111 11222 25778999965 33444433 248899987532 2224343 3 699
Q ss_pred EEEecCcC
Q 018464 120 IGGLSGIY 127 (355)
Q Consensus 120 IaGlsGi~ 127 (355)
||.+|-.-
T Consensus 153 IGiIG~~~ 160 (626)
T TIGR01390 153 VGYIGFVP 160 (626)
T ss_pred EEEEEecC
Confidence 99887543
No 106
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=96.61 E-value=0.037 Score=52.78 Aligned_cols=104 Identities=22% Similarity=0.241 Sum_probs=58.8
Q ss_pred EEEEEcCCCCC--hHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhcCCCCCCccEE
Q 018464 2 RIAVEGCMHGE--LDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTI 79 (355)
Q Consensus 2 kIlv~GD~HG~--ld~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~g~~~~p~pt~ 79 (355)
|||++||+=|. ...+.+.|..+-+++ +.|++|.-||..+...... ++-+.. +..+.+-.+
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~~lk~~~--~~D~vi~NgEn~~gg~gl~------~~~~~~----------L~~~G~D~i 62 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLPKLKKEY--KIDFVIANGENAAGGKGIT------PKIAKE----------LLSAGVDVI 62 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHHC--CCCEEEECCccccCCCCCC------HHHHHH----------HHhcCCCEE
Confidence 79999999997 456677777775554 5899999999876432111 111111 223455544
Q ss_pred EEcCCCCChhh-HHHHhhCC---ccCCceEE--eCC-ceEEEEcCEEEEEec
Q 018464 80 FIGGNHEASNY-LWELYYGG---WAAPNIYF--LGF-AGVVKFGNIRIGGLS 124 (355)
Q Consensus 80 fI~GNHE~~~~-l~el~~gg---~va~NI~y--Lg~-~gv~~i~GlrIaGls 124 (355)
..|||+.... +.+..... ...-|+.. -+. ..+++.+|+|||-++
T Consensus 63 -TlGNH~fD~gel~~~l~~~~~~l~~aN~~~~~pg~~~~i~~~~G~kIaVig 113 (255)
T cd07382 63 -TMGNHTWDKKEILDFIDEEPRLLRPANYPPGTPGRGYGVVEVNGKKIAVIN 113 (255)
T ss_pred -EecccccCcchHHHHHhcCcCceEeeecCCCCCCCCeEEEEECCEEEEEEE
Confidence 4489986533 22222111 12223211 122 345678999998654
No 107
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=96.54 E-value=0.0065 Score=59.52 Aligned_cols=60 Identities=17% Similarity=0.207 Sum_probs=41.3
Q ss_pred CCCcHHHHHHHHHhCCCEEEEeCC--CCccceeeccCCCCCeeEEEEccccCCCCCeeEEEeccC
Q 018464 204 TLGSEPAAQLLEKLKPSYWFSAHL--HCKFAAVVQHGEDSPVTKFLALDKCLPRRKFLQVFEIES 266 (355)
Q Consensus 204 ~lGS~~l~~ll~~lkPrywfsgH~--H~~f~a~~~~~~~~~~TrFlaL~k~~~~r~~l~a~~i~~ 266 (355)
.-|..++.+.+++.+=++.+=||- ...|.... +..-.|-|=|-.-|+....--.++.|..
T Consensus 239 ~fg~~~~~~Fl~~n~l~~iiRgHe~~~~G~~~~~---~~~~iTvfSa~~y~~~~~n~~ai~~i~~ 300 (311)
T cd07419 239 KFGPDRVHRFLEENDLQMIIRAHECVMDGFERFA---QGKLITLFSATNYCGTAGNAGAILVLGR 300 (311)
T ss_pred eECHHHHHHHHHHCCCeEEEEechhhhCCeEEeC---CCeEEEEecCCcccCCCCceEEEEEECC
Confidence 358899999999999999999995 34555332 2234687877777765444455555543
No 108
>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair]
Probab=96.54 E-value=0.0068 Score=62.64 Aligned_cols=79 Identities=23% Similarity=0.296 Sum_probs=49.9
Q ss_pred CEEEEEcCCCCC------------hHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhHHhhhHHH---
Q 018464 1 MRIAVEGCMHGE------------LDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFW--- 65 (355)
Q Consensus 1 mkIlv~GD~HG~------------ld~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~--- 65 (355)
|||||..|+|-. +..+-+ |-.+.+.+ .+|+|+..||+|.....+.- ++ |+-++-|.
T Consensus 14 irILVaTD~HlGY~EkD~vrg~DSf~tFeE-Il~iA~e~--~VDmiLlGGDLFHeNkPSr~-~L-----~~~i~lLRryC 84 (646)
T KOG2310|consen 14 IRILVATDNHLGYGEKDAVRGDDSFVTFEE-ILEIAQEN--DVDMILLGGDLFHENKPSRK-TL-----HRCLELLRRYC 84 (646)
T ss_pred eEEEEeecCccccccCCcccccchHHHHHH-HHHHHHhc--CCcEEEecCcccccCCccHH-HH-----HHHHHHHHHHc
Confidence 799999999942 222222 22333332 79999999999976433311 11 22233222
Q ss_pred --------------------------HHhcCCCCCCccEEEEcCCCCCh
Q 018464 66 --------------------------KYYSGQEVAPIPTIFIGGNHEAS 88 (355)
Q Consensus 66 --------------------------~y~~g~~~~p~pt~fI~GNHE~~ 88 (355)
.|+....-+.+|++-|.||||++
T Consensus 85 lgdkP~~le~lSD~s~~f~~~~f~~VNY~DpNlNIsIPVFsIHGNHDDp 133 (646)
T KOG2310|consen 85 LGDKPVQLEILSDQSVNFGNSVFGNVNYEDPNLNISIPVFSIHGNHDDP 133 (646)
T ss_pred cCCCceeeEEecccceeccccccceecccCCCcceeeeeEEeecCCCCC
Confidence 35555556789999999999987
No 109
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=96.52 E-value=0.02 Score=52.14 Aligned_cols=122 Identities=16% Similarity=0.131 Sum_probs=62.1
Q ss_pred EEEEcCCCCC-hHHHHHHHHHHHHhc--CCCccEEEEecCccccCCcchhhhccchhhHHh----hhHHHHHhcCCCCCC
Q 018464 3 IAVEGCMHGE-LDNVYKTLQYMENIN--SYKIDLLLCCGDFQAVRNENDMESLNVPRKYRE----MKSFWKYYSGQEVAP 75 (355)
Q Consensus 3 Ilv~GD~HG~-ld~i~~~i~~~~~k~--g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~----~~~f~~y~~g~~~~p 75 (355)
|+++++.|-. =+..++.+..+-+.. ..++++||++|+|.......... -.++..++. +..+.+.+.... ..
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~-~~ 78 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISS-GSVPDSYSFEEDFLKELDSFLESIL-PS 78 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHH-T---HHCCHHHHHHHHCHHHHCCCH-CC
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCcccccccc-ccccccccccHHHHHHHHHHHhhcc-cc
Confidence 6788888865 233355554444322 23799999999998754332110 001111222 333444443333 35
Q ss_pred ccEEEEcCCCCChhh-HH---HHhh--CCccCC--ceEEeCCceEEEEcCEEEEEecCc
Q 018464 76 IPTIFIGGNHEASNY-LW---ELYY--GGWAAP--NIYFLGFAGVVKFGNIRIGGLSGI 126 (355)
Q Consensus 76 ~pt~fI~GNHE~~~~-l~---el~~--gg~va~--NI~yLg~~gv~~i~GlrIaGlsGi 126 (355)
+.+++|+|++|.... .. .+.. -..... ++.++.+=..+.++|++|++.+|-
T Consensus 79 ~~vvlvPg~~D~~~~~~lPq~pl~~~~~~~~~~~~~~~~~sNP~~~~i~~~~i~~~s~d 137 (209)
T PF04042_consen 79 TQVVLVPGPNDPTSSPVLPQPPLHSKLFPKLKKYSNIHFVSNPCRISINGQEIGVTSGD 137 (209)
T ss_dssp SEEEEE--TTCTT-S-SCSB----TTTTCHHCTTTTEEE--CSEEEEETTEEEEE-SSH
T ss_pred cEEEEeCCCccccccCCCCCCCCCHHHHhhhhhcCceEEeCCCeEEEEeCCcEEEECCc
Confidence 789999999998755 11 1100 011122 277887778889999999998873
No 110
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=96.48 E-value=0.005 Score=61.82 Aligned_cols=70 Identities=21% Similarity=0.378 Sum_probs=44.8
Q ss_pred EEEEEcCCCCChHHHHHHHHHHHHhcCCC--ccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhcCCCCCCccEE
Q 018464 2 RIAVEGCMHGELDNVYKTLQYMENINSYK--IDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTI 79 (355)
Q Consensus 2 kIlv~GD~HG~ld~i~~~i~~~~~k~g~~--~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~g~~~~p~pt~ 79 (355)
+|.|+||+||.++.+...++. .|.+ -+.+|++||+..-. ..-++++. +...+ ....|--++
T Consensus 67 ~i~VvGDIHG~~~dL~~ll~~----~g~~~~~~~ylFLGDyVDRG-p~SlEvl~----------lL~~l--ki~~p~~v~ 129 (377)
T cd07418 67 EVVVVGDVHGQLHDVLFLLED----AGFPDQNRFYVFNGDYVDRG-AWGLETFL----------LLLSW--KVLLPDRVY 129 (377)
T ss_pred CEEEEEecCCCHHHHHHHHHH----hCCCCCCceEEEeccccCCC-CChHHHHH----------HHHHH--hhccCCeEE
Confidence 479999999999988776543 3322 25699999998533 22233221 11111 223466789
Q ss_pred EEcCCCCCh
Q 018464 80 FIGGNHEAS 88 (355)
Q Consensus 80 fI~GNHE~~ 88 (355)
.+.||||..
T Consensus 130 lLRGNHE~~ 138 (377)
T cd07418 130 LLRGNHESK 138 (377)
T ss_pred EEeeecccc
Confidence 999999975
No 111
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=96.46 E-value=0.0087 Score=53.46 Aligned_cols=52 Identities=27% Similarity=0.425 Sum_probs=31.3
Q ss_pred CccEEEEecCccccCCcchhhhccchhhHH-hhhHHHHHhcCCC--CCCccEEEEcCCCCC
Q 018464 30 KIDLLLCCGDFQAVRNENDMESLNVPRKYR-EMKSFWKYYSGQE--VAPIPTIFIGGNHEA 87 (355)
Q Consensus 30 ~~DllI~~GDf~~~~~~~dl~~~~~p~k~~-~~~~f~~y~~g~~--~~p~pt~fI~GNHE~ 87 (355)
++|+||++||++......+- ..+. ....|.+.+.... ...+++++|.||||-
T Consensus 45 ~pd~vi~lGDl~d~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~ 99 (171)
T cd07384 45 KPDVVLFLGDLFDGGRIADS------EEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDI 99 (171)
T ss_pred CCCEEEEeccccCCcEeCCH------HHHHHHHHHHHHHhcccccccCCceEEEECCcccc
Confidence 79999999999865332110 1111 2344444443221 136899999999984
No 112
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=96.44 E-value=0.01 Score=52.13 Aligned_cols=50 Identities=18% Similarity=0.324 Sum_probs=29.7
Q ss_pred CccEEEEecCccccCCcchhhhccchhhH-HhhhHHHHHhcCCCCCCccEEEEcCCCCC
Q 018464 30 KIDLLLCCGDFQAVRNENDMESLNVPRKY-REMKSFWKYYSGQEVAPIPTIFIGGNHEA 87 (355)
Q Consensus 30 ~~DllI~~GDf~~~~~~~dl~~~~~p~k~-~~~~~f~~y~~g~~~~p~pt~fI~GNHE~ 87 (355)
++|+||++||++.......- ..+ .....|.+.+.. ...+|+++|.||||.
T Consensus 38 ~pd~vv~~GDl~~~~~~~~~------~~~~~~~~~~~~~~~~--~~~~~i~~v~GNHD~ 88 (156)
T cd08165 38 QPDVVFVLGDLFDEGKWSTD------EEWEDYVERFKKMFGH--PPDLPLHVVVGNHDI 88 (156)
T ss_pred CCCEEEECCCCCCCCccCCH------HHHHHHHHHHHHHhcc--CCCCeEEEEcCCCCc
Confidence 69999999999864322110 001 112334433321 135789999999984
No 113
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=96.42 E-value=0.0083 Score=53.05 Aligned_cols=69 Identities=20% Similarity=0.222 Sum_probs=47.3
Q ss_pred EEEEEcCCCC------------ChHHHHH-HHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHh
Q 018464 2 RIAVEGCMHG------------ELDNVYK-TLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYY 68 (355)
Q Consensus 2 kIlv~GD~HG------------~ld~i~~-~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~ 68 (355)
+|.++||+|= +++..-+ .|..+++.-+ +-|.|-++|||...+|.+ ++.++.++-+
T Consensus 5 mmyfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~-p~D~lwhLGDl~~~~n~~-----------~~a~~IlerL 72 (186)
T COG4186 5 MMYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVG-PDDVLWHLGDLSSGANRE-----------RAAGLILERL 72 (186)
T ss_pred EEEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCC-ccceEEEecccccccchh-----------hHHHHHHHHc
Confidence 5889999993 2222222 2556666666 889999999999988753 2334556666
Q ss_pred cCCCCCCccEEEEcCCCCCh
Q 018464 69 SGQEVAPIPTIFIGGNHEAS 88 (355)
Q Consensus 69 ~g~~~~p~pt~fI~GNHE~~ 88 (355)
.|. ..+|+||||..
T Consensus 73 nGr------khlv~GNhDk~ 86 (186)
T COG4186 73 NGR------KHLVPGNHDKC 86 (186)
T ss_pred CCc------EEEeeCCCCCC
Confidence 664 48999999865
No 114
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=96.40 E-value=0.018 Score=55.57 Aligned_cols=114 Identities=17% Similarity=0.161 Sum_probs=61.2
Q ss_pred CEEEEEcCCCCChH----------------HHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhHHhhhHH
Q 018464 1 MRIAVEGCMHGELD----------------NVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSF 64 (355)
Q Consensus 1 mkIlv~GD~HG~ld----------------~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f 64 (355)
++|+-++|+||.++ .+.+.+++..++.+ +--+++-+||++......+.. ..|-+.|-++
T Consensus 6 ltILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~-~~~Llld~GD~~qGs~~~~~~----~~~g~~~~~~ 80 (282)
T cd07407 6 INFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKG-VDLLLVDTGDLHDGNGLSDAS----PPPGSYSNPI 80 (282)
T ss_pred EEEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcC-CCEEEEeCCCccCCeeceeee----cCCChHHHHH
Confidence 47999999999864 22233322222223 333777899987543222211 0011123333
Q ss_pred HHHhcCCCCCCccEEEEcCCCCChhh---HHH---Hh---hCCccCCceEEeCC----------ceEEEEc-CEEEEEec
Q 018464 65 WKYYSGQEVAPIPTIFIGGNHEASNY---LWE---LY---YGGWAAPNIYFLGF----------AGVVKFG-NIRIGGLS 124 (355)
Q Consensus 65 ~~y~~g~~~~p~pt~fI~GNHE~~~~---l~e---l~---~gg~va~NI~yLg~----------~gv~~i~-GlrIaGls 124 (355)
+.. +++ =.++.||||.... +.. +. .-.|++.||++-.. .-+++.+ |+|||-+|
T Consensus 81 mN~------mgy-Da~tlGNHEFd~g~~~l~~l~~~~~~~~fp~l~aNi~~~~~~~~~~~~~~~y~i~~~~~G~kIgiiG 153 (282)
T cd07407 81 FRM------MPY-DLLTIGNHELYNYEVADDEYEGFVPSWGDRYLTSNVDITDDSGLLVPIGSRYRKFTTKHGLRVLAFG 153 (282)
T ss_pred HHh------cCC-cEEeecccccCccccHHHHHHHHHhhcCCCEEEEEEEEeCCCCcccccccceEEEEcCCCcEEEEEE
Confidence 322 232 3678999998421 222 22 23589999986531 2344666 99998765
Q ss_pred Cc
Q 018464 125 GI 126 (355)
Q Consensus 125 Gi 126 (355)
=.
T Consensus 154 lt 155 (282)
T cd07407 154 FL 155 (282)
T ss_pred Ee
Confidence 44
No 115
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=95.98 E-value=0.015 Score=56.35 Aligned_cols=76 Identities=17% Similarity=0.186 Sum_probs=45.1
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhcCCCCCCccEEE
Q 018464 1 MRIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIF 80 (355)
Q Consensus 1 mkIlv~GD~HG~ld~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~g~~~~p~pt~f 80 (355)
.||+.++|+|-..-. .+.++.+.+..+...|+++.+||+...... +.+.... ..++. .+++.++++
T Consensus 45 ~~iv~lSDlH~~~~~-~~~~~~~~~i~~~~~DlivltGD~~~~~~~---------~~~~~~~---~~L~~-L~~~~gv~a 110 (284)
T COG1408 45 LKIVQLSDLHSLPFR-EEKLALLIAIANELPDLIVLTGDYVDGDRP---------PGVAALA---LFLAK-LKAPLGVFA 110 (284)
T ss_pred eEEEEeehhhhchhh-HHHHHHHHHHHhcCCCEEEEEeeeecCCCC---------CCHHHHH---HHHHh-hhccCCEEE
Confidence 378999999975433 222222322222344999999999875111 1122222 23333 346889999
Q ss_pred EcCCCCChhh
Q 018464 81 IGGNHEASNY 90 (355)
Q Consensus 81 I~GNHE~~~~ 90 (355)
|.||||-...
T Consensus 111 v~GNHd~~~~ 120 (284)
T COG1408 111 VLGNHDYGVD 120 (284)
T ss_pred Eecccccccc
Confidence 9999976533
No 116
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=95.92 E-value=0.05 Score=52.28 Aligned_cols=41 Identities=17% Similarity=0.263 Sum_probs=33.1
Q ss_pred CEEEEEcCCCCC--hHHHHHHHHHHHHhcCCCccEEEEecCcccc
Q 018464 1 MRIAVEGCMHGE--LDNVYKTLQYMENINSYKIDLLLCCGDFQAV 43 (355)
Q Consensus 1 mkIlv~GD~HG~--ld~i~~~i~~~~~k~g~~~DllI~~GDf~~~ 43 (355)
||||++||+=|+ -..+-+.+..+.+++ +.|++|+-||..+.
T Consensus 1 m~ilfiGDi~G~~Gr~~l~~~L~~lk~~~--~~D~vIaNgEn~~g 43 (266)
T TIGR00282 1 IKFLFIGDVYGKAGRKIVKNNLPQLKSKY--QADLVIANGENTTH 43 (266)
T ss_pred CeEEEEEecCCHHHHHHHHHHHHHHHHhC--CCCEEEEcCcccCC
Confidence 999999999998 455666677776654 59999999998754
No 117
>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=95.63 E-value=0.06 Score=47.33 Aligned_cols=111 Identities=20% Similarity=0.352 Sum_probs=62.2
Q ss_pred CEEEEEcCCCC--ChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhcCCCCCCccE
Q 018464 1 MRIAVEGCMHG--ELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPT 78 (355)
Q Consensus 1 mkIlv~GD~HG--~ld~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~g~~~~p~pt 78 (355)
|-+|++||.|= +-..+-.+.+++- --| ++.-++|.|.+... ++++|+. ...--+
T Consensus 1 mLvL~lgD~HiP~Ra~~Lp~KFkklL-vPg-ki~hilctGNlcs~-------------------e~~dylk---~l~~dv 56 (183)
T KOG3325|consen 1 MLVLVLGDLHIPHRANDLPAKFKKLL-VPG-KIQHILCTGNLCSK-------------------ESYDYLK---TLSSDV 56 (183)
T ss_pred CEEEEeccccCCccccccCHHHHhcc-CCC-ceeEEEEeCCcchH-------------------HHHHHHH---hhCCCc
Confidence 66888899883 1122222222221 123 78888888886432 3355542 222234
Q ss_pred EEEcCCCCChhhHHHHhhCCccCCceEEeCCceEEEEcCEEEEEecCcCCCcccCCCCCCCCCCChhhHhhhhhhhhHHH
Q 018464 79 IFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDV 158 (355)
Q Consensus 79 ~fI~GNHE~~~~l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~~e~~py~~~~~rs~yh~re~dv 158 (355)
=.|.|.-|.. .. -...++++++.+|||.++|.. -.|++..+.-+
T Consensus 57 hiVrGeFD~~---------------~~-yP~~kvvtvGqfkIG~chGhq-----------ViP~gd~~sL~--------- 100 (183)
T KOG3325|consen 57 HIVRGEFDEN---------------LK-YPENKVVTVGQFKIGLCHGHQ-----------VIPWGDPESLA--------- 100 (183)
T ss_pred EEEecccCcc---------------cc-CCccceEEeccEEEEeecCcE-----------eecCCCHHHHH---------
Confidence 4566655433 11 124688999999999999853 46765432211
Q ss_pred HHHhccCCCccEEEe
Q 018464 159 HKLMQIEEPIDIFLS 173 (355)
Q Consensus 159 ~~L~~~~~~vDIllT 173 (355)
+++-.-++|||||
T Consensus 101 --~LaRqldvDILl~ 113 (183)
T KOG3325|consen 101 --LLARQLDVDILLT 113 (183)
T ss_pred --HHHHhcCCcEEEe
Confidence 2222347999997
No 118
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=95.08 E-value=0.07 Score=54.02 Aligned_cols=52 Identities=25% Similarity=0.401 Sum_probs=33.3
Q ss_pred CccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhcCCCCCCccEEEEcCCCCCh
Q 018464 30 KIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGGNHEAS 88 (355)
Q Consensus 30 ~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~g~~~~p~pt~fI~GNHE~~ 88 (355)
++|+++++||++......+-++. .++...|.+.+. .+-.++++.|+||||--
T Consensus 93 kPdvvffLGDLfDeG~~~~~eEf-----~~~~~RfkkIf~--~k~~~~~~~i~GNhDIG 144 (410)
T KOG3662|consen 93 KPDVVFFLGDLFDEGQWAGDEEF-----KKRYERFKKIFG--RKGNIKVIYIAGNHDIG 144 (410)
T ss_pred CCCEEEEeccccccCccCChHHH-----HHHHHHHHHhhC--CCCCCeeEEeCCccccc
Confidence 79999999999985543332222 122333444431 23578999999999864
No 119
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=94.86 E-value=0.094 Score=48.07 Aligned_cols=52 Identities=25% Similarity=0.426 Sum_probs=32.8
Q ss_pred CccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhcCCC---------------CCCccEEEEcCCCCC
Q 018464 30 KIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQE---------------VAPIPTIFIGGNHEA 87 (355)
Q Consensus 30 ~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~g~~---------------~~p~pt~fI~GNHE~ 87 (355)
++|.|+++||++...-..|.+ . +.+...|.+.+.... .-.++++.|+||||-
T Consensus 44 ~Pd~V~fLGDLfd~~w~~D~e-f-----~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~V~GNHDI 110 (193)
T cd08164 44 KPDAVVVLGDLFSSQWIDDEE-F-----AKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLINIAGNHDV 110 (193)
T ss_pred CCCEEEEeccccCCCcccHHH-H-----HHHHHHHHHHhcCCcccccccccccccccccCCceEEEECCcccC
Confidence 799999999998654322211 1 244566666442111 114889999999984
No 120
>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]
Probab=93.80 E-value=0.13 Score=48.13 Aligned_cols=69 Identities=20% Similarity=0.340 Sum_probs=45.4
Q ss_pred EEEEcCCCCChHHHHHHHHHHHHhcCC-CccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhcCCCCCCccEEEE
Q 018464 3 IAVEGCMHGELDNVYKTLQYMENINSY-KIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFI 81 (355)
Q Consensus 3 Ilv~GD~HG~ld~i~~~i~~~~~k~g~-~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~g~~~~p~pt~fI 81 (355)
+-|+||+||.+-.+.+..+ .-|. |-.--|..|||..-. |-.+..|--++.-+.+-|-.+-.+
T Consensus 48 VTvCGDIHGQFyDL~eLFr----tgG~vP~tnYiFmGDfVDRG-------------yySLEtfT~l~~LkaryP~~ITLl 110 (306)
T KOG0373|consen 48 VTVCGDIHGQFYDLLELFR----TGGQVPDTNYIFMGDFVDRG-------------YYSLETFTLLLLLKARYPAKITLL 110 (306)
T ss_pred eeEeeccchhHHHHHHHHH----hcCCCCCcceEEeccccccc-------------cccHHHHHHHHHHhhcCCceeEEe
Confidence 5699999998766554332 2232 444578899997533 233556655544445567778899
Q ss_pred cCCCCCh
Q 018464 82 GGNHEAS 88 (355)
Q Consensus 82 ~GNHE~~ 88 (355)
.||||..
T Consensus 111 RGNHEsR 117 (306)
T KOG0373|consen 111 RGNHESR 117 (306)
T ss_pred eccchhh
Confidence 9999976
No 121
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=93.31 E-value=0.17 Score=47.98 Aligned_cols=69 Identities=22% Similarity=0.316 Sum_probs=44.5
Q ss_pred EEEEcCCCCChHHHHHHHHHHHHhcCC-CccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhcCCCCCCccEEEE
Q 018464 3 IAVEGCMHGELDNVYKTLQYMENINSY-KIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFI 81 (355)
Q Consensus 3 Ilv~GD~HG~ld~i~~~i~~~~~k~g~-~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~g~~~~p~pt~fI 81 (355)
|-|+||+||.+..+.+..+ .-|. +-.=-|.+|||..-.- -.+..|+-.+.-+..-|--+-.|
T Consensus 45 vtvcGDIHGQf~Dllelf~----igG~~~~t~YLFLGDyVDRG~-------------~SvEt~lLLl~lK~rYP~ritLi 107 (303)
T KOG0372|consen 45 VTVCGDIHGQFYDLLELFR----IGGDVPETNYLFLGDYVDRGY-------------YSVETFLLLLALKVRYPDRITLI 107 (303)
T ss_pred cEEeecccchHHHHHHHHH----hCCCCCCCceEeecchhcccc-------------chHHHHHHHHHHhhcCcceeEEe
Confidence 5799999999887765442 2232 3455788999975321 12344544433344456678899
Q ss_pred cCCCCCh
Q 018464 82 GGNHEAS 88 (355)
Q Consensus 82 ~GNHE~~ 88 (355)
.||||..
T Consensus 108 RGNHEsR 114 (303)
T KOG0372|consen 108 RGNHESR 114 (303)
T ss_pred eccchhh
Confidence 9999987
No 122
>cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain. CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal
Probab=92.87 E-value=4.8 Score=37.36 Aligned_cols=56 Identities=16% Similarity=0.239 Sum_probs=30.9
Q ss_pred CCCCccEEEEcCCCCCh---hhHHHHhhCCccCCceEEeC---------CceEEEEcCEEEEEecCcCC
Q 018464 72 EVAPIPTIFIGGNHEAS---NYLWELYYGGWAAPNIYFLG---------FAGVVKFGNIRIGGLSGIYN 128 (355)
Q Consensus 72 ~~~p~pt~fI~GNHE~~---~~l~el~~gg~va~NI~yLg---------~~gv~~i~GlrIaGlsGi~~ 128 (355)
+.+.+-.+.+++||+.. ..+.+... .+-..||.+.| ..-+++++|+|||.+|-...
T Consensus 74 ~~~G~d~~tlaNNH~fD~G~~gl~~t~~-~l~~~~i~~~g~~~~~~~~~~~~i~~~~g~kVg~ig~t~~ 141 (239)
T cd07381 74 KAAGFDVVSLANNHTLDYGEEGLLDTLD-ALDEAGIAHAGAGRNLEEARRPAILEVNGIKVAFLAYTYG 141 (239)
T ss_pred HHhCCCEEEcccccccccchHHHHHHHH-HHHHcCCceeECCCCHHHhcCcEEEEECCEEEEEEEEECC
Confidence 33567777788899775 11222110 01122343333 23456789999988776553
No 123
>TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family. This model describes a small collection of probable metallophosphoresterases, related to pfam00149. Members of this protein family usually have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. This model and TIGR03767 divide a narrow clade of pfam00149-related enzymes.
Probab=92.60 E-value=0.23 Score=51.14 Aligned_cols=62 Identities=23% Similarity=0.345 Sum_probs=42.0
Q ss_pred hHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhcCCC--------------------
Q 018464 13 LDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQE-------------------- 72 (355)
Q Consensus 13 ld~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~g~~-------------------- 72 (355)
++++.++|+.+.++ .+||++|.+||-..... |-|+.=|.+.++|..
T Consensus 84 ~~AaVqtvNal~~~--~p~df~is~GD~~nn~~------------~nElrWyidvldG~~I~p~SG~~~~~e~v~~~~p~ 149 (492)
T TIGR03768 84 LDAAVQTVNDLHKR--DRFDFGISLGDACNSTQ------------YNELRWYIDVLDGKPITPSSGAHAGADTIDYQKPF 149 (492)
T ss_pred HHHHHHHHHHhhcC--CCceEEEeccccccchh------------HHHHHHHHHHhcCCeeccCCCCCCCccCCCCCCcc
Confidence 56777777777543 48999999999764321 334444555555422
Q ss_pred -----CCCccEEEEcCCCCCh
Q 018464 73 -----VAPIPTIFIGGNHEAS 88 (355)
Q Consensus 73 -----~~p~pt~fI~GNHE~~ 88 (355)
...+|.|.+.||||..
T Consensus 150 ~a~GL~~~iPWY~v~GNHD~~ 170 (492)
T TIGR03768 150 QAAGLDKSIPWYQVLGNHDHF 170 (492)
T ss_pred cccccCCCCceEEeecCCccc
Confidence 1248999999999875
No 124
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]
Probab=91.67 E-value=0.27 Score=48.70 Aligned_cols=60 Identities=20% Similarity=0.202 Sum_probs=46.4
Q ss_pred CCCcHHHHHHHHHhCCCEEEEeCC--CCccceeeccCCCCCeeEEEEccccCCCCCeeEEEeccC
Q 018464 204 TLGSEPAAQLLEKLKPSYWFSAHL--HCKFAAVVQHGEDSPVTKFLALDKCLPRRKFLQVFEIES 266 (355)
Q Consensus 204 ~lGS~~l~~ll~~lkPrywfsgH~--H~~f~a~~~~~~~~~~TrFlaL~k~~~~r~~l~a~~i~~ 266 (355)
.-|...++++++++.=...+-||- ...|+.+-. ..-+|-|-|-.-|+........+.++.
T Consensus 230 ~fg~~~v~~f~~~~~ldlivRaHqvv~dGyeffa~---r~lvTIFSAP~Ycg~~~n~gavm~Vd~ 291 (331)
T KOG0374|consen 230 TFGPAVVEDFCKKLDLDLIVRAHQVVEDGYEFFAG---RKLVTIFSAPNYCGEFDNAGAVMRVDK 291 (331)
T ss_pred EecHHHHHHHHHHhCcceEEEcCccccccceEecC---ceEEEEecCchhccccCCceEEEEECC
Confidence 468899999999999999999994 566665532 234899999999987777777777754
No 125
>smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap. This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein.
Probab=91.21 E-value=13 Score=34.66 Aligned_cols=113 Identities=15% Similarity=0.200 Sum_probs=56.5
Q ss_pred EEEEEcCC--C-----CChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcch-----hhhccchhhHHhhhHHHHHhc
Q 018464 2 RIAVEGCM--H-----GELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNEND-----MESLNVPRKYREMKSFWKYYS 69 (355)
Q Consensus 2 kIlv~GD~--H-----G~ld~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~d-----l~~~~~p~k~~~~~~f~~y~~ 69 (355)
+|+++||+ | -+++.+|+.+..+-+ ..|++|+==.......... .-.+..|+ ++-+++
T Consensus 1 ~i~~~GDi~~~~~~~~~~~~~~~~~v~~~~~----~aD~~~~NlE~~~~~~~~~~~~~~~~~f~~~~---~~~~~l---- 69 (239)
T smart00854 1 TLSFVGDVMLGRGVYKADFSPPFAGVKPLLR----AADLAIGNLETPITGSGSPASGKKYPNFRAPP---ENAAAL---- 69 (239)
T ss_pred CEEEEeeecccCcccccCcchHHHHHHHHHh----cCCEeEEEeeccccCCCCCCCCCCceEecCCH---HHHHHH----
Confidence 57889986 2 235777877765533 4788775321110000000 01112221 222222
Q ss_pred CCCCCCccEEEEcCCCCChh---hHHHHhhCCccCCceEEeCC---------ceEEEEcCEEEEEecCcCC
Q 018464 70 GQEVAPIPTIFIGGNHEASN---YLWELYYGGWAAPNIYFLGF---------AGVVKFGNIRIGGLSGIYN 128 (355)
Q Consensus 70 g~~~~p~pt~fI~GNHE~~~---~l~el~~gg~va~NI~yLg~---------~gv~~i~GlrIaGlsGi~~ 128 (355)
+.+.+-...+++||+..- -+.+... .+-..||.++|. .-+++++|+|||.+|-...
T Consensus 70 --~~~G~d~~~laNNH~fD~G~~gl~~t~~-~l~~a~i~~~g~~~~~~~~~~~~i~~~~g~kIg~ig~t~~ 137 (239)
T smart00854 70 --KAAGFDVVSLANNHSLDYGEEGLLDTLA-ALDAAGIAHVGAGRNLAEARKPAIVEVKGIKIALLAYTYG 137 (239)
T ss_pred --HHhCCCEEEeccCcccccchHHHHHHHH-HHHHCCCCEeeCCCChHHhhCcEEEEECCEEEEEEEEEcC
Confidence 335677777888998751 1222110 001224444432 2356789999998876553
No 126
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]
Probab=90.60 E-value=0.57 Score=44.83 Aligned_cols=69 Identities=20% Similarity=0.318 Sum_probs=42.3
Q ss_pred EEEEcCCCCChHHHHHHHHHHHHhcCC-CccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhcC-CCCCCccEEE
Q 018464 3 IAVEGCMHGELDNVYKTLQYMENINSY-KIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSG-QEVAPIPTIF 80 (355)
Q Consensus 3 Ilv~GD~HG~ld~i~~~i~~~~~k~g~-~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~g-~~~~p~pt~f 80 (355)
+-|+||+||.++.+.+.+ +--|. +---.|..||+..-...++ +.+ .|+-. +.+-|--+-+
T Consensus 62 vtvcGDvHGqf~dl~ELf----kiGG~~pdtnylfmGDyvdrGy~Sv-etV-------------S~lva~Kvry~~rvti 123 (319)
T KOG0371|consen 62 VTVCGDVHGQFHDLIELF----KIGGLAPDTNYLFMGDYVDRGYYSV-ETV-------------SLLVALKVRYPDRVTI 123 (319)
T ss_pred eEEecCcchhHHHHHHHH----HccCCCCCcceeeeeeecccccchH-HHH-------------HHHHHhhccccceeEE
Confidence 579999999999888765 22232 3344788999986443332 111 12211 1223555788
Q ss_pred EcCCCCChh
Q 018464 81 IGGNHEASN 89 (355)
Q Consensus 81 I~GNHE~~~ 89 (355)
+.||||...
T Consensus 124 lrGNHEsrq 132 (319)
T KOG0371|consen 124 LRGNHESRQ 132 (319)
T ss_pred ecCchHHHH
Confidence 999999763
No 127
>COG1692 Calcineurin-like phosphoesterase [General function prediction only]
Probab=89.15 E-value=0.76 Score=43.62 Aligned_cols=42 Identities=29% Similarity=0.355 Sum_probs=35.1
Q ss_pred CEEEEEcCCCCC--hHHHHHHHHHHHHhcCCCccEEEEecCccccC
Q 018464 1 MRIAVEGCMHGE--LDNVYKTLQYMENINSYKIDLLLCCGDFQAVR 44 (355)
Q Consensus 1 mkIlv~GD~HG~--ld~i~~~i~~~~~k~g~~~DllI~~GDf~~~~ 44 (355)
||||++||+=|. .+.+.+.+..+.++. +.|++|+=|...+..
T Consensus 1 mriLfiGDvvGk~Gr~~v~~~Lp~lk~ky--k~dfvI~N~ENaa~G 44 (266)
T COG1692 1 MRILFIGDVVGKPGRKAVKEHLPQLKSKY--KIDFVIVNGENAAGG 44 (266)
T ss_pred CeEEEEecccCcchHHHHHHHhHHHHHhh--cCcEEEEcCccccCC
Confidence 999999999996 577888888876664 699999999987654
No 128
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=87.52 E-value=0.89 Score=45.12 Aligned_cols=52 Identities=27% Similarity=0.204 Sum_probs=33.4
Q ss_pred CccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhcCCCCCCccEEEEcCCCCChhhHH
Q 018464 30 KIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGGNHEASNYLW 92 (355)
Q Consensus 30 ~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~g~~~~p~pt~fI~GNHE~~~~l~ 92 (355)
++|+|+..||.....+-.|.+..- |..+... ..-.+|.-.+.||||..+.+.
T Consensus 100 ~PDlVVfTGD~i~g~~t~Da~~sl-------~kAvaP~----I~~~IPwA~~lGNHDdes~lt 151 (379)
T KOG1432|consen 100 KPDLVVFTGDNIFGHSTQDAATSL-------MKAVAPA----IDRKIPWAAVLGNHDDESDLT 151 (379)
T ss_pred CCCEEEEeCCcccccccHhHHHHH-------HHHhhhH----hhcCCCeEEEecccccccccC
Confidence 699999999977655544432210 2222222 223689999999999986653
No 129
>KOG3818 consensus DNA polymerase epsilon, subunit B [Replication, recombination and repair]
Probab=86.10 E-value=5.5 Score=40.87 Aligned_cols=109 Identities=17% Similarity=0.158 Sum_probs=64.5
Q ss_pred EEEEEcCCCCChHHHHHHHHHHHHhcC-CCccEEEEecCcccc-CCcchhhhccchhhHHhhhHHHHHhcCC---CC--C
Q 018464 2 RIAVEGCMHGELDNVYKTLQYMENINS-YKIDLLLCCGDFQAV-RNENDMESLNVPRKYREMKSFWKYYSGQ---EV--A 74 (355)
Q Consensus 2 kIlv~GD~HG~ld~i~~~i~~~~~k~g-~~~DllI~~GDf~~~-~~~~dl~~~~~p~k~~~~~~f~~y~~g~---~~--~ 74 (355)
++.+++|+|-+..++.+++.++-++.. .++-++|.||.|.+. ++.+....+ + ..|-....++ .+ -
T Consensus 284 ~fVfLSdV~LD~~~vm~aL~kifqgy~~~pP~~iIlcG~FtS~p~~~~s~~~~------k--~~f~~LA~~l~~~~~~~e 355 (525)
T KOG3818|consen 284 SFVFLSDVFLDDKKVMEALRKIFQGYKDAPPTAIILCGSFTSSPRQTSSSDQL------K--DGFRWLAAQLTCFRKDYE 355 (525)
T ss_pred eEEEEehhccccHHHHHHHHHHHhhccCCCCeEEEEeccccccccccchHHHH------H--HHHHHHHhhccccccccc
Confidence 467789999998888888888877653 478999999999964 443322211 1 1122222221 10 1
Q ss_pred CccEEEEcCCCCCh--h-----hHHHHhhCC--ccCCceEEeCCceEEEEcCEEEEEecC
Q 018464 75 PIPTIFIGGNHEAS--N-----YLWELYYGG--WAAPNIYFLGFAGVVKFGNIRIGGLSG 125 (355)
Q Consensus 75 p~pt~fI~GNHE~~--~-----~l~el~~gg--~va~NI~yLg~~gv~~i~GlrIaGlsG 125 (355)
....|||+|-.|.- + .+.+....+ .+++|. ++.-+.-||.++|-
T Consensus 356 kT~fIFVPGP~Dp~~~~iLPr~piP~~~~~~i~kv~~~t-------vfasNPcRIqy~sQ 408 (525)
T KOG3818|consen 356 KTQFIFVPGPNDPWVDNILPRPPIPSLFTKHISKVCKNT-------VFASNPCRIQYCSQ 408 (525)
T ss_pred cceEEEecCCCCCCcCccCCCCCchHHHHHHHHhhcCCc-------eeccCCeeeEeecc
Confidence 24579999988764 1 122222221 345543 34457778887774
No 130
>KOG0375 consensus Serine-threonine phosphatase 2B, catalytic subunit [General function prediction only]
Probab=85.90 E-value=1.3 Score=44.28 Aligned_cols=69 Identities=25% Similarity=0.325 Sum_probs=37.4
Q ss_pred EEEEcCCCCChHHHHHHHHHHHHhcCCCc-cEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhcCCCCCCccEEEE
Q 018464 3 IAVEGCMHGELDNVYKTLQYMENINSYKI-DLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFI 81 (355)
Q Consensus 3 Ilv~GD~HG~ld~i~~~i~~~~~k~g~~~-DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~g~~~~p~pt~fI 81 (355)
|-|+||+||.+-.+.+ -.+- -|.|. .--+.+||...-. .-..+|+ .=.++-+..-|-..+..
T Consensus 90 iTVCGDIHGQf~DLmK---LFEV-GG~PA~t~YLFLGDYVDRG-yFSiECv------------lYLwsLKi~yp~tl~lL 152 (517)
T KOG0375|consen 90 ITVCGDIHGQFFDLMK---LFEV-GGSPANTRYLFLGDYVDRG-YFSIECV------------LYLWSLKINYPKTLFLL 152 (517)
T ss_pred eeEecccchHHHHHHH---HHHc-cCCcccceeEeeccccccc-eeeeehH------------HHHHHHhcCCCCeEEEe
Confidence 6799999998644432 2222 23232 3467889986422 1122232 11122223335556678
Q ss_pred cCCCCCh
Q 018464 82 GGNHEAS 88 (355)
Q Consensus 82 ~GNHE~~ 88 (355)
.||||..
T Consensus 153 RGNHECr 159 (517)
T KOG0375|consen 153 RGNHECR 159 (517)
T ss_pred cCCcchh
Confidence 9999976
No 131
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=82.41 E-value=0.95 Score=45.21 Aligned_cols=61 Identities=11% Similarity=0.043 Sum_probs=41.0
Q ss_pred eeeeChHHHHHHHhhCCCCCCCCCCCCCCC-----CCCChHHHHHHHHHHhhhCC-CCCccceEccCC
Q 018464 272 EIQYDEEWLAITRTFNSVFPLTSQSANFGG-----VQHDMNDCRQWVRSRLQERG-AKPFEFVRTVPC 333 (355)
Q Consensus 272 ~~~~d~~wl~i~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~-~~~~~f~~t~~~ 333 (355)
.-+++-+||..+|+.+.+..+.+. .++|. ....+.++.+||+|+..++. .++.||..|||.
T Consensus 357 ~~~~f~a~l~rl~~~~~~~~~~~d-~dlps~~~~e~~t~~~~~e~~~de~~~~~~~~~~~~~~nt~p~ 423 (456)
T KOG2863|consen 357 QTSVFSAELSRLRAMHVLREIERD-IDLPSYDSPEPYTLKIQKEEMVDEKADEDFMTIARNFCNTAPH 423 (456)
T ss_pred chhhHHHHHhhhhhhhhhhhhhcC-CCccccCCccccccccHHHHHhhhhhcccccccchhhccCCCC
Confidence 457778999988888666655432 22222 22345677899999884433 248999999985
No 132
>COG1058 CinA Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA [General function prediction only]
Probab=72.20 E-value=23 Score=33.97 Aligned_cols=107 Identities=16% Similarity=0.112 Sum_probs=58.6
Q ss_pred EEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhcc---------chhhHHhhhHHHHHhcCCC
Q 018464 2 RIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLN---------VPRKYREMKSFWKYYSGQE 72 (355)
Q Consensus 2 kIlv~GD~HG~ld~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~---------~p~k~~~~~~f~~y~~g~~ 72 (355)
++.++|| +.+.|.+.+...-+ ..|+||+.|=++...++-..+++| .|..++.+.+|+... .
T Consensus 39 ~~~~VgD---~~~~I~~~l~~a~~----r~D~vI~tGGLGPT~DDiT~e~vAka~g~~lv~~~~al~~i~~~~~~r---~ 108 (255)
T COG1058 39 RITTVGD---NPDRIVEALREASE----RADVVITTGGLGPTHDDLTAEAVAKALGRPLVLDEEALAMIEEKYAKR---G 108 (255)
T ss_pred EEEecCC---CHHHHHHHHHHHHh----CCCEEEECCCcCCCccHhHHHHHHHHhCCCcccCHHHHHHHHHHHHhc---C
Confidence 5778888 45555555544332 489999999998764433333332 233344444443321 1
Q ss_pred CCCccEEEEcCCCCChhhHHHHhhCCccCCceEEeCCceEEEEcCEEEEEecCcC
Q 018464 73 VAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIY 127 (355)
Q Consensus 73 ~~p~pt~fI~GNHE~~~~l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~ 127 (355)
.+. .++......++.|..+-+|=+=.-.+-++..+|..+..+-|.-
T Consensus 109 -~~~--------~~~~~K~A~~P~Ga~~l~NpvG~APG~~v~~~~~~v~~lPGvP 154 (255)
T COG1058 109 -REM--------TEANRKQAMLPEGAEVLDNPVGTAPGFVVEGNGKNVYVLPGVP 154 (255)
T ss_pred -CCC--------ChhhhhhccCCCCCEeCCCCCCCCCeeEEecCCeEEEEeCCCC
Confidence 000 1222233344567676666443333344566888888888763
No 133
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=69.93 E-value=1.6 Score=44.59 Aligned_cols=69 Identities=29% Similarity=0.395 Sum_probs=42.8
Q ss_pred EEEEcCCCCChHHHHHHHHHHHHhcCCC--ccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhcCCCCCCccEEE
Q 018464 3 IAVEGCMHGELDNVYKTLQYMENINSYK--IDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIF 80 (355)
Q Consensus 3 Ilv~GD~HG~ld~i~~~i~~~~~k~g~~--~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~g~~~~p~pt~f 80 (355)
|-|+||.||.+|.+.-. --|+|.| -.--+.-|||..-. ...++.+ |-=|.-| ..-|.-++.
T Consensus 167 VTiCGDLHGklDDL~~I----~yKNGlPS~~npYvFNGDFVDRG-k~siEvL--------miL~a~~----lv~P~~~~L 229 (631)
T KOG0377|consen 167 VTICGDLHGKLDDLLVI----LYKNGLPSSSNPYVFNGDFVDRG-KRSIEVL--------MILFALY----LVYPNAVHL 229 (631)
T ss_pred eEEeccccccccceEEE----EecCCCCCCCCCeeecCchhhcc-ccchhhH--------HHHHHHH----hcCchhhhc
Confidence 67999999999987632 2356643 34467889997532 2222222 1222223 234667788
Q ss_pred EcCCCCCh
Q 018464 81 IGGNHEAS 88 (355)
Q Consensus 81 I~GNHE~~ 88 (355)
=.||||++
T Consensus 230 NRGNHED~ 237 (631)
T KOG0377|consen 230 NRGNHEDH 237 (631)
T ss_pred cCCchHHH
Confidence 89999987
No 134
>cd07389 MPP_PhoD Bacillus subtilis PhoD and related proteins, metallophosphatase domain. PhoD (also known as alkaline phosphatase D/APaseD in Bacillus subtilis) is a secreted phosphodiesterase encoded by phoD of the Pho regulon in Bacillus subtilis. PhoD homologs are found in prokaryotes, eukaryotes, and archaea. PhoD contains a twin arginine (RR) motif and is transported by the Tat (Twin-arginine translocation) translocation pathway machinery (TatAyCy). This family also includes the Fusarium oxysporum Fso1 protein. PhoD belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF
Probab=69.07 E-value=7.8 Score=35.34 Aligned_cols=40 Identities=33% Similarity=0.436 Sum_probs=24.1
Q ss_pred EEEEEcCCCCChH--HHHHHHHHHHHhcCCCccEEEEecCcccc
Q 018464 2 RIAVEGCMHGELD--NVYKTLQYMENINSYKIDLLLCCGDFQAV 43 (355)
Q Consensus 2 kIlv~GD~HG~ld--~i~~~i~~~~~k~g~~~DllI~~GDf~~~ 43 (355)
||++.+|.+-+.. ..+..+..... ..++|++|.+||....
T Consensus 1 r~a~~SC~~~~~~~~~~~~~~~~~~~--~~~~d~~l~~GD~IY~ 42 (228)
T cd07389 1 RFAFGSCNKYESGYFNAYRALAYDHS--EEDPDLFLHLGDQIYA 42 (228)
T ss_pred CEEEEECCCCCCCCcHHHHHHhhhcc--ccCCCEEEEcCCeecc
Confidence 5788888876532 23322211101 2379999999998754
No 135
>KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism]
Probab=68.89 E-value=15 Score=39.12 Aligned_cols=68 Identities=22% Similarity=0.302 Sum_probs=38.0
Q ss_pred ChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhh--ccchhhHHhhh-HHHHHhcCCCCCCccEEEEcCCCCCh
Q 018464 12 ELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMES--LNVPRKYREMK-SFWKYYSGQEVAPIPTIFIGGNHEAS 88 (355)
Q Consensus 12 ~ld~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~--~~~p~k~~~~~-~f~~y~~g~~~~p~pt~fI~GNHE~~ 88 (355)
-...+-+.+..+.+ +...+|.+|..||......-....+ +++ +.++- -+.+|. -.+|+|.-.||||..
T Consensus 193 P~~lies~L~~ike-~~~~iD~I~wTGD~~~H~~w~~t~~~~l~~---~~~l~~~~~e~F-----pdvpvypalGNhe~~ 263 (577)
T KOG3770|consen 193 PKRLIESALDHIKE-NHKDIDYIIWTGDNVAHDVWAQTEEENLSM---LSRLTSLLSEYF-----PDVPVYPALGNHEIH 263 (577)
T ss_pred CHHHHHHHHHHHHh-cCCCCCEEEEeCCCCcccchhhhHHHHHHH---HHHHHHHHHHhC-----CCCceeeecccCCCC
Confidence 34445555655543 3325999999999987642221111 110 11111 112332 278999999999975
No 136
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=68.69 E-value=14 Score=28.23 Aligned_cols=37 Identities=19% Similarity=0.346 Sum_probs=28.9
Q ss_pred CEEEEEcCCCC-ChHHHHHHHHHHHHhcCCCccEEEEecCc
Q 018464 1 MRIAVEGCMHG-ELDNVYKTLQYMENINSYKIDLLLCCGDF 40 (355)
Q Consensus 1 mkIlv~GD~HG-~ld~i~~~i~~~~~k~g~~~DllI~~GDf 40 (355)
|||+|+|.-.= +.+.|++.|.++.++. .+++|+.|.-
T Consensus 4 ~rVli~GgR~~~D~~~i~~~Ld~~~~~~---~~~~lvhGga 41 (71)
T PF10686_consen 4 MRVLITGGRDWTDHELIWAALDKVHARH---PDMVLVHGGA 41 (71)
T ss_pred CEEEEEECCccccHHHHHHHHHHHHHhC---CCEEEEECCC
Confidence 89999997553 6788999998887774 4777888765
No 137
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=67.37 E-value=18 Score=35.23 Aligned_cols=43 Identities=12% Similarity=0.063 Sum_probs=29.3
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHHHhc-C-----CCccEEEEecCcccc
Q 018464 1 MRIAVEGCMHGELDNVYKTLQYMENIN-S-----YKIDLLLCCGDFQAV 43 (355)
Q Consensus 1 mkIlv~GD~HG~ld~i~~~i~~~~~k~-g-----~~~DllI~~GDf~~~ 43 (355)
.||.|+||+|=+--...++++++-... + ..+-++|.+|+|...
T Consensus 28 ~~~VilSDV~LD~p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~ 76 (291)
T PTZ00235 28 HNWIIMHDVYLDSPYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISL 76 (291)
T ss_pred eEEEEEEeeccCCHHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCC
Confidence 378899999987555555555443332 1 136789999999864
No 138
>PF09423 PhoD: PhoD-like phosphatase; InterPro: IPR018946 This entry contains a number of putative proteins as well as Alkaline phosphatase D which catalyses the reaction: A phosphate monoester + H(2)O = an alcohol + phosphate ; PDB: 2YEQ_B.
Probab=59.93 E-value=7.4 Score=39.81 Aligned_cols=39 Identities=23% Similarity=0.294 Sum_probs=18.0
Q ss_pred CEEEEEcCCCCC--hHHHHHHHHHHHHhcCCCccEEEEecCccccC
Q 018464 1 MRIAVEGCMHGE--LDNVYKTLQYMENINSYKIDLLLCCGDFQAVR 44 (355)
Q Consensus 1 mkIlv~GD~HG~--ld~i~~~i~~~~~k~g~~~DllI~~GDf~~~~ 44 (355)
+||++.||.+.+ .-.+|..+ .++ .++|++|++||.....
T Consensus 106 ~r~a~~SC~~~~~~~~~~~~~~---a~~--~~~D~~l~lGD~IY~d 146 (453)
T PF09423_consen 106 FRFAFGSCQNYEDGYFPAYRRI---AER--DDPDFVLHLGDQIYED 146 (453)
T ss_dssp EEEEEE----CCC---HHHHHH---TT---S--SEEEE-S-SS---
T ss_pred eEEEEECCCCcccChHHHHHhh---hcc--CCCcEEEEeCCeeecc
Confidence 589999999864 44555544 232 2699999999987543
No 139
>KOG1625 consensus DNA polymerase alpha-primase complex, polymerase-associated subunit B [Replication, recombination and repair]
Probab=51.58 E-value=1.3e+02 Score=32.18 Aligned_cols=107 Identities=12% Similarity=0.173 Sum_probs=62.2
Q ss_pred hHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhHHhh--hHHHHHhcCCCCCCccEEEEcCCCCChhh
Q 018464 13 LDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREM--KSFWKYYSGQEVAPIPTIFIGGNHEASNY 90 (355)
Q Consensus 13 ld~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~--~~f~~y~~g~~~~p~pt~fI~GNHE~~~~ 90 (355)
++.+.+.|..++++ ++|+||.+|=|...++. -+...+++..+.++ ..+..++++.....+-+++|+--.|+..
T Consensus 358 yepL~dll~~v~~~---~pdvLIL~GPFlD~~h~-~i~~~~~t~t~delF~~~i~~ile~~~~~~~~vVlvPs~~Da~~- 432 (600)
T KOG1625|consen 358 YEPLCDLLDYVNAE---RPDVLILFGPFLDSKHP-LINKGALTITFDELFEKLILGILETLVGSKTQVVLVPSTNDALC- 432 (600)
T ss_pred hhHHHHHHHHHhcC---CCCEEEEeccccCccCh-hhccCCcCccHHHHHHHHHHHHHHhccCCcceEEEecccccccc-
Confidence 56677777666543 79999999999865432 12222222223332 2233344433322345888988666542
Q ss_pred HHHHh-----hCCccC--CceEEeCCceEEEEcCEEEEEec
Q 018464 91 LWELY-----YGGWAA--PNIYFLGFAGVVKFGNIRIGGLS 124 (355)
Q Consensus 91 l~el~-----~gg~va--~NI~yLg~~gv~~i~GlrIaGls 124 (355)
+.-.+ ..+-.. .|++++++-..+.++|+.+|-.|
T Consensus 433 ~~vfPq~pf~~~~~~~~~~~l~~~~nPc~f~in~v~vg~ts 473 (600)
T KOG1625|consen 433 LPVFPQPPFARNRLSDEKKNLKCVANPCLFSINGVEVGVTS 473 (600)
T ss_pred CccCCCCchhhhhccCcccceEEccCcceEEEccEEEEeec
Confidence 11111 112123 49999999999999999987654
No 140
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=48.67 E-value=17 Score=31.73 Aligned_cols=21 Identities=38% Similarity=0.472 Sum_probs=16.9
Q ss_pred HHHHhCCCEEEEeCCCCccce
Q 018464 213 LLEKLKPSYWFSAHLHCKFAA 233 (355)
Q Consensus 213 ll~~lkPrywfsgH~H~~f~a 233 (355)
++...+|+++||||.|.....
T Consensus 117 ~~~~~~~~~~l~GH~H~~~~~ 137 (156)
T cd08165 117 LLQWLKPRLVLSGHTHSFCEV 137 (156)
T ss_pred HHHhhCCCEEEEcccCCCcee
Confidence 566779999999999985443
No 141
>PF13277 YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C.
Probab=48.56 E-value=39 Score=32.35 Aligned_cols=40 Identities=20% Similarity=0.194 Sum_probs=27.6
Q ss_pred EEEcCCCCC--hHHHHHHHHHHHHhcCCCccEEEEecCccccCC
Q 018464 4 AVEGCMHGE--LDNVYKTLQYMENINSYKIDLLLCCGDFQAVRN 45 (355)
Q Consensus 4 lv~GD~HG~--ld~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~ 45 (355)
|++||+=|+ .+.+.+.+..+.++. .+|++|+-|.-.+...
T Consensus 1 LfiGDIvG~~Gr~~v~~~Lp~L~~~~--~~DfVIaNgENaa~G~ 42 (253)
T PF13277_consen 1 LFIGDIVGKPGRRAVKEHLPELKEEY--GIDFVIANGENAAGGF 42 (253)
T ss_dssp EEE-EBBCHHHHHHHHHHHHHHGG----G-SEEEEE-TTTTTTS
T ss_pred CeEEecCCHHHHHHHHHHHHHHHhhc--CCCEEEECCcccCCCC
Confidence 689999997 467777788886665 5999999999776543
No 142
>PF13483 Lactamase_B_3: Beta-lactamase superfamily domain; PDB: 1VJN_B 3KL7_A.
Probab=42.26 E-value=1.2e+02 Score=25.93 Aligned_cols=23 Identities=48% Similarity=0.725 Sum_probs=16.6
Q ss_pred CCCcHHHHHHHHHhCCCEEEEeC
Q 018464 204 TLGSEPAAQLLEKLKPSYWFSAH 226 (355)
Q Consensus 204 ~lGS~~l~~ll~~lkPrywfsgH 226 (355)
..|.+...++++.++||+.+--|
T Consensus 141 ~~~~~~a~~~~~~l~pk~viP~H 163 (163)
T PF13483_consen 141 TMGPEEAAELAERLKPKLVIPMH 163 (163)
T ss_dssp S--HHHHHHHHHHCT-SEEEEES
T ss_pred ccCHHHHHHHHHHcCCCEEEeCC
Confidence 35667789999999999998655
No 143
>KOG3592 consensus Microtubule-associated proteins [Cytoskeleton]
Probab=37.61 E-value=61 Score=35.54 Aligned_cols=57 Identities=23% Similarity=0.247 Sum_probs=33.4
Q ss_pred hhHHHHHhcCCCCCCccEEEEcCCCCChhhHHHHhhCCcc---CCceEEeC----CceEEEEcCEEEEEecCcC
Q 018464 61 MKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWA---APNIYFLG----FAGVVKFGNIRIGGLSGIY 127 (355)
Q Consensus 61 ~~~f~~y~~g~~~~p~pt~fI~GNHE~~~~l~el~~gg~v---a~NI~yLg----~~gv~~i~GlrIaGlsGi~ 127 (355)
+.+|.+|++....+|.|.=+ +..-..||.+ .|.+|.++ .+..+-++|+.|.--||..
T Consensus 4 l~eF~eyvsesvevpspfdl----------lepptsggflklSKpCcYIfpGg~gdaALFavnGf~iLv~Ggse 67 (934)
T KOG3592|consen 4 LSEFTEYVSESVEVPSPFDL----------LEPPTSGGFLKLSKPCCYIFPGGRGDAALFAVNGFNILVNGGSE 67 (934)
T ss_pred HHHHHHHHHHhhcCCChHhh----------cCCCCCccchhcCCceEEECCCCCCcceeEeecceEEeecCCcc
Confidence 56889998776655544211 1111134533 46666663 3346778999997666665
No 144
>PF03490 Varsurf_PPLC: Variant-surface-glycoprotein phospholipase C; InterPro: IPR003633 Variant-surface-glycoprotein phospholipase C, by hydrolysis of the attached glycolipid, releases soluble variant surface glycoprotein containing phosphoinositol from the cell wall after lysis. It catalyses the conversion of variant-surface-glycoprotein 1,2 didecanoyl-SN-phosphatidylinositol and water to 1,2-didecanoylglycerol and the soluble variant-surface-glycoprotein. It also cleaves similar membrane anchors on some mammalian proteins.; GO: 0047396 glycosylphosphatidylinositol diacylglycerol-lyase activity, 0006650 glycerophospholipid metabolic process
Probab=33.45 E-value=33 Score=24.60 Aligned_cols=27 Identities=26% Similarity=0.512 Sum_probs=19.6
Q ss_pred hhHHHHHhcCCCCCCccEEEEcCCCCChhh
Q 018464 61 MKSFWKYYSGQEVAPIPTIFIGGNHEASNY 90 (355)
Q Consensus 61 ~~~f~~y~~g~~~~p~pt~fI~GNHE~~~~ 90 (355)
|.|...++. ..++.-+||+|.|++..|
T Consensus 12 M~DLrS~I~---~~~I~ql~ipGsHns~ty 38 (51)
T PF03490_consen 12 MSDLRSSIG---EMAITQLFIPGSHNSGTY 38 (51)
T ss_pred HHHHHHHHh---cceeeeEEeccccccccc
Confidence 555556653 357889999999988765
No 145
>KOG1752 consensus Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=31.62 E-value=47 Score=27.39 Aligned_cols=40 Identities=30% Similarity=0.508 Sum_probs=25.3
Q ss_pred hhHHHHHhcCCCCCCccEEEEcCCCCCh-hhHHHHhhCCccCC
Q 018464 61 MKSFWKYYSGQEVAPIPTIFIGGNHEAS-NYLWELYYGGWAAP 102 (355)
Q Consensus 61 ~~~f~~y~~g~~~~p~pt~fI~GNHE~~-~~l~el~~gg~va~ 102 (355)
+++-+..++|.. .+|.+||+|.|=-. +.+.++...|.+.+
T Consensus 55 iq~~l~~~tg~~--tvP~vFI~Gk~iGG~~dl~~lh~~G~L~~ 95 (104)
T KOG1752|consen 55 IQKALKKLTGQR--TVPNVFIGGKFIGGASDLMALHKSGELVP 95 (104)
T ss_pred HHHHHHHhcCCC--CCCEEEECCEEEcCHHHHHHHHHcCCHHH
Confidence 444444555655 77899999998543 44666666665543
No 146
>TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family. This model describes a small collection of probable metallophosphoresterases, related to pfam00149. Members of this protein family usually have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. This model and TIGR03767 divide a narrow clade of pfam00149-related enzymes.
Probab=29.95 E-value=1.2e+02 Score=31.87 Aligned_cols=23 Identities=22% Similarity=0.361 Sum_probs=16.4
Q ss_pred HHHHHHHHh-CCCEEEEeCCCCcc
Q 018464 209 PAAQLLEKL-KPSYWFSAHLHCKF 231 (355)
Q Consensus 209 ~l~~ll~~l-kPrywfsgH~H~~f 231 (355)
.+.+++... ..+.|||||.|...
T Consensus 389 eLlaLL~~hPnVla~LsGHvHrn~ 412 (492)
T TIGR03768 389 GLVTTLQKYPNLLMWIAGHRHLNT 412 (492)
T ss_pred HHHHHHhcCCCeEEEEcCCccccc
Confidence 466666664 56789999999654
No 147
>COG2047 Uncharacterized protein (ATP-grasp superfamily) [General function prediction only]
Probab=28.48 E-value=50 Score=31.20 Aligned_cols=19 Identities=37% Similarity=0.552 Sum_probs=15.7
Q ss_pred CccEEEEecCccccCCcch
Q 018464 30 KIDLLLCCGDFQAVRNEND 48 (355)
Q Consensus 30 ~~DllI~~GDf~~~~~~~d 48 (355)
.-|++|.+||+|+..+...
T Consensus 83 ~~Dliil~Gd~Q~~~~~gq 101 (258)
T COG2047 83 ERDLIILVGDTQATSSEGQ 101 (258)
T ss_pred CCcEEEEeccccccCcchh
Confidence 6799999999999766543
No 148
>TIGR03413 GSH_gloB hydroxyacylglutathione hydrolase. Members of this protein family are hydroxyacylglutathione hydrolase, a detoxification enzyme known as glyoxalase II. It follows lactoylglutathione lyase, or glyoxalase I, and acts to remove the toxic metabolite methylglyoxal and related compounds. This protein belongs to the broader metallo-beta-lactamase family (pfam00753).
Probab=27.30 E-value=85 Score=29.38 Aligned_cols=35 Identities=23% Similarity=0.387 Sum_probs=25.7
Q ss_pred EEEEEcCC----------CCChHHHHHHHHHHHHhcCCCccEEEEecC
Q 018464 2 RIAVEGCM----------HGELDNVYKTLQYMENINSYKIDLLLCCGD 39 (355)
Q Consensus 2 kIlv~GD~----------HG~ld~i~~~i~~~~~k~g~~~DllI~~GD 39 (355)
+++++||+ -|+...++++++++.+ .+.+.+|+||=
T Consensus 120 ~~lftGDtl~~~g~g~~~~~~~~~~~~Sl~~l~~---l~~~~~i~pGH 164 (248)
T TIGR03413 120 PALFCGDTLFSAGCGRLFEGTPEQMYDSLQRLAA---LPDDTLVYCAH 164 (248)
T ss_pred CEEEEcCccccCCcCCCCCCCHHHHHHHHHHHHc---CCCCeEEECCC
Confidence 57888886 3567788888776643 36788888885
No 149
>cd06403 PB1_Par6 The PB1 domain is an essential part of Par6 protein which in complex with Par3 and aPKC proteins is crucial for establishment of apical-basal polarity of animal cells. The PB1 domain is a modular domain mediating specific protein-protein interactions which play a role in many critical cell processes. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain module is conserved in amoebas, fungi, animals, and plants. The
Probab=26.75 E-value=3.2e+02 Score=21.58 Aligned_cols=41 Identities=24% Similarity=0.600 Sum_probs=29.7
Q ss_pred EEcCCCCChHHHHHHHHHHHHhcCCCccEEEEe----cCccccCCcc
Q 018464 5 VEGCMHGELDNVYKTLQYMENINSYKIDLLLCC----GDFQAVRNEN 47 (355)
Q Consensus 5 v~GD~HG~ld~i~~~i~~~~~k~g~~~DllI~~----GDf~~~~~~~ 47 (355)
+--...++++.+|..++.+..-. .++++||- ||+-...|++
T Consensus 16 l~r~~~~~f~ef~~ll~~lH~l~--~~~f~i~Y~D~~gDLLPInNDd 60 (80)
T cd06403 16 LDRNKPGKFEDFYKLLEHLHHIP--NVDFLIGYTDPHGDLLPINNDD 60 (80)
T ss_pred eccccCcCHHHHHHHHHHHhCCC--CCcEEEEEeCCCCCEecccCcH
Confidence 33345689999999999887654 48888886 6676666554
No 150
>COG5214 POL12 DNA polymerase alpha-primase complex, polymerase-associated subunit B [DNA replication, recombination, and repair]
Probab=25.19 E-value=2.6e+02 Score=28.96 Aligned_cols=106 Identities=16% Similarity=0.250 Sum_probs=56.8
Q ss_pred hHHHHHHHHHHHHhcCCCccEEEEecCccccCC----cchhhhccchhhHHhhhH-HHHHhcCC-CCCCcc-EEEEcCCC
Q 018464 13 LDNVYKTLQYMENINSYKIDLLLCCGDFQAVRN----ENDMESLNVPRKYREMKS-FWKYYSGQ-EVAPIP-TIFIGGNH 85 (355)
Q Consensus 13 ld~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~----~~dl~~~~~p~k~~~~~~-f~~y~~g~-~~~p~p-t~fI~GNH 85 (355)
+..+++.|..+++. ++|+||.||-|..... ...+.. .|+ ..|.+ |.+.+++. ++..+| ++.|+-..
T Consensus 322 ~~pl~~~id~vn~n---~vdvlIl~GPFidi~h~li~~G~~~~--t~~--~~l~ElF~~r~tpiL~~~~~p~~vLIPstn 394 (581)
T COG5214 322 GSPLFDAIDRVNAN---DVDVLILIGPFIDINHILIQYGATQS--TPD--SMLKELFIPRITPILDRNAGPKAVLIPSTN 394 (581)
T ss_pred cChHHHHHHHhccC---CccEEEEeccccCcchhhhhhCCCCC--CCh--hHHHHHHHHhhhHHHhccCCCceEEecccc
Confidence 45667777766542 7999999999975410 000000 011 11211 33333322 233445 89999887
Q ss_pred CChhhHHHHhhCC------ccCCceEEeCCceEEEEcCEEEEEecCc
Q 018464 86 EASNYLWELYYGG------WAAPNIYFLGFAGVVKFGNIRIGGLSGI 126 (355)
Q Consensus 86 E~~~~l~el~~gg------~va~NI~yLg~~gv~~i~GlrIaGlsGi 126 (355)
|+.+-....+.|. .+-.|..+++.-..+.++.+-+| +|..
T Consensus 395 Da~s~h~a~PQ~~~~r~al~lp~nfkC~~NPc~F~INei~fg-~Ss~ 440 (581)
T COG5214 395 DATSCHNAFPQGPIGRNALRLPSNFKCTGNPCEFFINEILFG-ISSL 440 (581)
T ss_pred chhhccccCCccccchhhhcCCccccccCCcceeEeeeeEEE-eccC
Confidence 7763332322221 24456667777777777776654 4443
No 151
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=22.94 E-value=1e+02 Score=27.22 Aligned_cols=21 Identities=33% Similarity=0.507 Sum_probs=17.2
Q ss_pred HHHHhCCCEEEEeCCCCccce
Q 018464 213 LLEKLKPSYWFSAHLHCKFAA 233 (355)
Q Consensus 213 ll~~lkPrywfsgH~H~~f~a 233 (355)
++.+.+|.+.||||.|-....
T Consensus 129 ~~~~~~~~~~lsGH~H~~~~~ 149 (171)
T cd07384 129 LLDTIKPVLILSGHDHDQCEV 149 (171)
T ss_pred HHhccCceEEEeCcccCCeEE
Confidence 567789999999999988433
No 152
>PF14529 Exo_endo_phos_2: Endonuclease-reverse transcriptase ; PDB: 2EI9_A 1WDU_B.
Probab=22.78 E-value=1e+02 Score=24.36 Aligned_cols=30 Identities=20% Similarity=0.297 Sum_probs=17.6
Q ss_pred ChHHHHHHHHHHHHhcCCCccEEEEecCcccc
Q 018464 12 ELDNVYKTLQYMENINSYKIDLLLCCGDFQAV 43 (355)
Q Consensus 12 ~ld~i~~~i~~~~~k~g~~~DllI~~GDf~~~ 43 (355)
..+.+++.+..+-+... ..-+|++|||-+.
T Consensus 13 ~~~~~~~~l~~~~~~~~--~~~~Ii~GDFN~~ 42 (119)
T PF14529_consen 13 EREEFFDQLRQLLKNLP--PAPIIIGGDFNAH 42 (119)
T ss_dssp -CHHHHHHHHHHHHCCT--TSSEEEEEE----
T ss_pred cHHHHHHHHHHHHHhCC--CCCEEEEeECCCC
Confidence 35677777777766543 1289999999764
No 153
>KOG4419 consensus 5' nucleotidase [Nucleotide transport and metabolism]
Probab=22.64 E-value=5.3e+02 Score=27.86 Aligned_cols=28 Identities=14% Similarity=0.338 Sum_probs=16.3
Q ss_pred hHHHHHHHHHHHHhcCCCccE-EEEecCccc
Q 018464 13 LDNVYKTLQYMENINSYKIDL-LLCCGDFQA 42 (355)
Q Consensus 13 ld~i~~~i~~~~~k~g~~~Dl-lI~~GDf~~ 42 (355)
+.++...++.+.+..| .|+ ++=.||.-.
T Consensus 71 f~~f~~~~k~~a~~~~--~dvl~~dtGD~hd 99 (602)
T KOG4419|consen 71 FAAFALRMKELADRKG--VDVLLVDTGDLHD 99 (602)
T ss_pred HHHHHHHHHHHHhccC--CCEEEEecccccC
Confidence 3355556666644443 565 556888754
No 154
>PF02844 GARS_N: Phosphoribosylglycinamide synthetase, N domain; InterPro: IPR020562 Phosphoribosylglycinamide synthetase (6.3.4.13 from EC) (GARS) (phosphoribosylamine glycine ligase) [] catalyses the second step in the de novo biosynthesis of purine. The reaction catalysed by phosphoribosylglycinamide synthetase is the ATP-dependent addition of 5-phosphoribosylamine to glycine to form 5'phosphoribosylglycinamide: ATP + 5-phosphoribosylamine + glycine = ADP + Pi + 5'-phosphoribosylglycinamide In bacteria, GARS is a monofunctional enzyme (encoded by the purD gene). In yeast, GARS is part of a bifunctional enzyme (encoded by the ADE5/7 gene) in conjunction with phosphoribosylformylglycinamidine cyclo-ligase (AIRS) (IPR000728 from INTERPRO). In higher eukaryotes, GARS is part of a trifunctional enzyme in conjunction with AIRS (IPR000728 from INTERPRO) and with phosphoribosylglycinamide formyltransferase (GART) (), forming GARS-AIRS-GART. This entry represents the N-domain, which is related to the N-terminal domain of biotin carboxylase/carbamoyl phosphate synthetase (IPR005481 from INTERPRO).; GO: 0004637 phosphoribosylamine-glycine ligase activity, 0009113 purine base biosynthetic process; PDB: 3MJF_A 2XD4_A 2XCL_A 2IP4_A 2YW2_B 2YYA_A 3LP8_A 1VKZ_A 2YS6_A 2YRX_A ....
Probab=22.46 E-value=84 Score=25.77 Aligned_cols=31 Identities=16% Similarity=0.218 Sum_probs=20.7
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEe
Q 018464 1 MRIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCC 37 (355)
Q Consensus 1 mkIlv~GD~HG~ld~i~~~i~~~~~k~g~~~DllI~~ 37 (355)
|||||+|.. |+-++|-.++. ++ ...+-|+|+
T Consensus 1 MkVLviGsG-gREHAia~~l~----~s-~~v~~v~~a 31 (100)
T PF02844_consen 1 MKVLVIGSG-GREHAIAWKLS----QS-PSVEEVYVA 31 (100)
T ss_dssp EEEEEEESS-HHHHHHHHHHT----TC-TTEEEEEEE
T ss_pred CEEEEECCC-HHHHHHHHHHh----cC-CCCCEEEEe
Confidence 999999986 66667766653 22 256666664
No 155
>cd00293 USP_Like Usp: Universal stress protein family. The universal stress protein Usp is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. Usp enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae Usp reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, athough Usp lacks ATP-binding activity.
Probab=22.23 E-value=3.7e+02 Score=20.62 Aligned_cols=81 Identities=11% Similarity=0.069 Sum_probs=45.2
Q ss_pred EEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhcCCCCCCccEEEE
Q 018464 2 RIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFI 81 (355)
Q Consensus 2 kIlv~GD~HG~ld~i~~~i~~~~~k~g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~g~~~~p~pt~fI 81 (355)
+|+|.-|....-..+.+....+-++.+.++.++-+..+...... ....-......+.+.++.+.... ..+++.+.++
T Consensus 1 ~ilv~i~~~~~~~~~l~~a~~~a~~~~~~i~~l~v~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~ 77 (130)
T cd00293 1 RILVAVDGSEESERALRWAARLARRLGAELVLLHVVDPPPSSAA--ELAELLEEEARALLEALREALAE-AGVKVETVVL 77 (130)
T ss_pred CEEEEeCCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCCCCcch--hHHHHHHHHHHHHHHHHHHHHhc-CCCceEEEEe
Confidence 57888887666677777766666666657777777666443211 00000011223345666655322 2356666777
Q ss_pred cCCC
Q 018464 82 GGNH 85 (355)
Q Consensus 82 ~GNH 85 (355)
.|+.
T Consensus 78 ~~~~ 81 (130)
T cd00293 78 EGDP 81 (130)
T ss_pred cCCC
Confidence 7775
No 156
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=21.64 E-value=3.7e+02 Score=24.04 Aligned_cols=59 Identities=17% Similarity=0.120 Sum_probs=44.4
Q ss_pred CCccEEEeCCCCCCCccCCcchhhhhhccchhhcccCCCCCcHHHHHHHHHhCCCEEEEeCCCCccceeeccCCCCCeeE
Q 018464 166 EPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVVQHGEDSPVTK 245 (355)
Q Consensus 166 ~~vDIllTHdwP~gi~~~g~~~~l~~~kp~f~~~~~~~~lGS~~l~~ll~~lkPrywfsgH~H~~f~a~~~~~~~~~~Tr 245 (355)
.++-|++||-+=..+.. .-..+..+.+.......++||.|........ .+.
T Consensus 80 ~g~ki~l~HGh~~~~~~-----------------------~~~~l~~la~~~~~Dvli~GHTH~p~~~~~~------~i~ 130 (172)
T COG0622 80 GGVKIFLTHGHLYFVKT-----------------------DLSLLEYLAKELGADVLIFGHTHKPVAEKVG------GIL 130 (172)
T ss_pred CCEEEEEECCCcccccc-----------------------CHHHHHHHHHhcCCCEEEECCCCcccEEEEC------CEE
Confidence 56889999987555221 1235778888999999999999988766553 388
Q ss_pred EEEccccC
Q 018464 246 FLALDKCL 253 (355)
Q Consensus 246 FlaL~k~~ 253 (355)
+||-+.+-
T Consensus 131 ~vNPGS~s 138 (172)
T COG0622 131 LVNPGSVS 138 (172)
T ss_pred EEcCCCcC
Confidence 99888875
No 157
>PF03492 Methyltransf_7: SAM dependent carboxyl methyltransferase; InterPro: IPR005299 This family of plant methyltransferases contains enzymes that act on a variety of substrates including salicylic acid, jasmonic acid and 7-Methylxanthine. Caffeine is synthesized through sequential three-step methylation of xanthine derivatives at positions 7-N, 3-N, and 1-N. The protein 7-methylxanthine methyltransferase (designated as CaMXMT) catalyses the second step to produce theobromine [].; GO: 0008168 methyltransferase activity; PDB: 2EFJ_A 1M6E_X 2EG5_C 3B5I_B.
Probab=21.08 E-value=2e+02 Score=28.41 Aligned_cols=73 Identities=19% Similarity=0.297 Sum_probs=37.7
Q ss_pred CEEEEEcCCCCC--h---HHHHHHHHHHHHhc--CCCccEEEEecCccccCCcchhhhccchhhHHhhhHHHHHhcCCCC
Q 018464 1 MRIAVEGCMHGE--L---DNVYKTLQYMENIN--SYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEV 73 (355)
Q Consensus 1 mkIlv~GD~HG~--l---d~i~~~i~~~~~k~--g~~~DllI~~GDf~~~~~~~dl~~~~~p~k~~~~~~f~~y~~g~~~ 73 (355)
|+||=.||.+|. + ..|.++|.....+. ..+..+-++.-|+-.. |...+ ++.+..|.+.+.. .
T Consensus 18 ~~iaD~GcS~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~e~~v~~nDlP~N----DFn~l-----F~~l~~~~~~~~~--~ 86 (334)
T PF03492_consen 18 FRIADLGCSSGPNSLLAVSNIIDAIRERCRSSNNQPPPEFQVFFNDLPSN----DFNTL-----FKSLPSFQQSLKK--F 86 (334)
T ss_dssp EEEEEES--SSHHHHHHHHHHHHHHHHHHHCTT-SS--EEEEEEEE-TTS-----HHHH-----HHCHHHHHHHHHH--T
T ss_pred eEEEecCCCCCccHHHHHHHHHHHHHHHhhhhcCCCCCeEEEEeCCCCCc----cHHHH-----HHhChhhhhccCC--C
Confidence 589999999995 3 44444443333332 2467889998898532 34444 3455555444333 2
Q ss_pred CCccEEEEcCC
Q 018464 74 APIPTIFIGGN 84 (355)
Q Consensus 74 ~p~pt~fI~GN 84 (355)
-++-+..|||+
T Consensus 87 ~~~f~~gvpgS 97 (334)
T PF03492_consen 87 RNYFVSGVPGS 97 (334)
T ss_dssp TSEEEEEEES-
T ss_pred ceEEEEecCch
Confidence 35566677774
No 158
>PF00462 Glutaredoxin: Glutaredoxin; InterPro: IPR002109 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. This entry represents Glutaredoxin.; GO: 0009055 electron carrier activity, 0015035 protein disulfide oxidoreductase activity, 0045454 cell redox homeostasis; PDB: 1QFN_A 1GRX_A 1EGO_A 1EGR_A 3RHC_A 3RHB_A 3IPZ_A 1NHO_A 3GX8_A 3D5J_A ....
Probab=20.17 E-value=97 Score=21.81 Aligned_cols=12 Identities=33% Similarity=0.880 Sum_probs=9.9
Q ss_pred CCccEEEEcCCC
Q 018464 74 APIPTIFIGGNH 85 (355)
Q Consensus 74 ~p~pt~fI~GNH 85 (355)
..+|++||+|+|
T Consensus 48 ~~~P~v~i~g~~ 59 (60)
T PF00462_consen 48 RTVPQVFIDGKF 59 (60)
T ss_dssp SSSSEEEETTEE
T ss_pred CccCEEEECCEE
Confidence 467999999975
Done!