Query 018467
Match_columns 355
No_of_seqs 234 out of 659
Neff 5.4
Searched_HMMs 29240
Date Mon Mar 25 15:43:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018467.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018467hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qk9_A Mitochondrial import in 100.0 3.2E-58 1.1E-62 427.8 17.7 206 132-354 7-221 (222)
2 2cw9_A Translocase of inner mi 100.0 1.3E-47 4.5E-52 349.2 20.5 183 168-354 3-193 (194)
3 4hyz_A Uncharacterized protein 90.9 1 3.6E-05 36.7 8.4 79 204-292 5-88 (114)
4 3gzr_A Uncharacterized protein 88.5 6.4 0.00022 32.7 11.7 108 218-348 7-127 (146)
5 3soy_A NTF2-like superfamily p 87.3 4.1 0.00014 33.8 9.8 117 215-351 8-136 (145)
6 3f7s_A Uncharacterized NTF2-li 86.5 11 0.00038 30.1 12.2 28 218-245 9-36 (142)
7 2f86_B Hypothetical protein K1 86.3 0.48 1.6E-05 40.0 3.4 109 218-352 13-134 (143)
8 2ux0_A Calcium-calmodulin depe 86.2 12 0.0004 30.0 12.2 29 217-245 13-41 (143)
9 3h51_A Putative calcium/calmod 86.1 5 0.00017 33.1 9.7 109 217-349 20-138 (156)
10 3gwr_A Putative calcium/calmod 85.2 9.6 0.00033 31.6 11.0 27 219-245 10-36 (144)
11 4i4k_A Uncharacterized protein 84.5 13 0.00046 30.3 11.5 29 218-246 20-48 (143)
12 3fsd_A NTF2-like protein of un 84.4 6.6 0.00023 31.6 9.4 106 217-348 14-130 (134)
13 3bb9_A Putative orphan protein 81.8 13 0.00045 30.1 10.4 29 218-246 31-59 (148)
14 2r4i_A Uncharacterized protein 80.3 12 0.00041 28.7 9.2 30 217-246 6-35 (123)
15 3hx8_A MLR2180 protein, putati 79.1 19 0.00066 27.5 14.5 111 217-353 6-128 (129)
16 3cnx_A Uncharacterized protein 78.4 33 0.0011 29.7 15.6 29 218-246 13-41 (170)
17 3rob_A Uncharacterized conserv 77.8 28 0.00095 28.6 12.9 101 219-345 19-131 (139)
18 3ksp_A Calcium/calmodulin-depe 77.1 14 0.00047 30.7 9.0 98 226-348 18-123 (129)
19 3blz_A NTF2-like protein of un 70.9 18 0.00061 28.8 8.1 94 218-347 13-121 (128)
20 3duk_A NTF2-like protein of un 68.3 37 0.0013 27.3 9.5 90 219-345 14-118 (125)
21 3ejv_A Uncharacterized protein 67.3 26 0.0009 30.0 8.9 117 218-347 27-169 (179)
22 3fka_A Uncharacterized NTF-2 l 66.0 38 0.0013 27.0 9.1 87 222-346 14-115 (120)
23 3b7c_A Uncharacterized protein 61.1 46 0.0016 25.9 8.6 29 218-246 6-36 (122)
24 2gxf_A Hypothetical protein YY 59.9 30 0.001 27.6 7.5 111 218-351 4-124 (142)
25 3d9r_A Ketosteroid isomerase-l 56.8 64 0.0022 24.7 13.9 28 218-245 12-39 (135)
26 3ehc_A Snoal-like polyketide c 52.8 45 0.0015 25.9 7.2 28 219-246 5-32 (128)
27 2rcd_A Uncharacterized protein 50.7 87 0.003 24.5 11.0 30 216-245 13-42 (129)
28 2kfe_A Meucin-24; alpha-helix, 45.7 6 0.0002 24.5 0.6 16 1-16 10-25 (26)
29 2gey_A ACLR protein; alpha+bet 45.5 1E+02 0.0035 24.9 8.6 27 219-245 6-32 (158)
30 3b8l_A Uncharacterized protein 45.2 1.1E+02 0.0037 24.8 8.7 27 219-245 30-57 (163)
31 3dmc_A NTF2-like protein; stru 42.7 6.6 0.00023 32.0 0.7 32 215-246 10-41 (134)
32 3cu3_A Domain of unknown funct 41.6 1.4E+02 0.0049 24.4 11.1 29 217-245 16-44 (172)
33 3g0k_A Putative membrane prote 40.8 64 0.0022 26.5 6.6 29 218-246 28-57 (148)
34 2chc_A Protein RV3472; hypothe 38.7 1.6E+02 0.0054 23.9 11.2 26 220-245 17-42 (170)
35 3f40_A Uncharacterized NTF2-li 35.0 13 0.00043 29.5 1.2 27 220-246 9-35 (114)
36 2gex_A SNOL; alpha+beta barrel 29.7 2.1E+02 0.0072 22.7 10.0 27 219-245 6-32 (152)
37 3us6_A Histidine-containing ph 27.5 27 0.00093 29.6 2.1 54 189-242 16-78 (153)
38 2owp_A Hypothetical protein BX 25.6 2.6E+02 0.0088 22.3 11.8 36 212-247 6-41 (129)
39 1ohp_A Steroid delta-isomerase 25.3 33 0.0011 25.6 2.0 29 218-246 6-34 (125)
40 3fgy_A Uncharacterized NTF2-li 24.9 34 0.0012 26.6 2.1 28 219-246 7-34 (135)
41 3ec9_A Uncharacterized NTF2-li 24.0 23 0.00079 28.0 0.9 27 220-246 15-41 (140)
42 2rfr_A Uncharacterized protein 23.6 2.7E+02 0.0092 21.8 9.2 28 218-245 20-47 (155)
43 3f9s_A Putative polyketide cyc 23.3 1.3E+02 0.0043 23.8 5.3 28 220-247 9-37 (146)
44 1nww_A Limonene-1,2-epoxide hy 23.0 37 0.0013 27.0 2.0 27 220-246 25-51 (149)
45 1oh0_A Steroid delta-isomerase 22.9 39 0.0013 25.9 2.1 29 218-246 8-36 (131)
46 3i0y_A Putative polyketide cyc 22.5 35 0.0012 26.7 1.8 28 219-246 10-37 (140)
47 3h3h_A Uncharacterized snoal-l 22.5 32 0.0011 26.7 1.4 28 218-245 9-36 (122)
48 3f7x_A Putative polyketide cyc 22.2 27 0.00092 28.6 1.0 28 220-247 23-50 (151)
49 3en8_A Uncharacterized NTF-2 l 22.0 38 0.0013 27.1 1.8 29 218-246 6-34 (128)
50 1yvi_A Histidine-containing ph 22.0 41 0.0014 28.0 2.1 62 200-261 27-108 (149)
51 2r25_A Phosphorelay intermedia 21.9 42 0.0014 29.3 2.2 55 208-262 25-93 (167)
52 1tuh_A BAL32A, hypothetical pr 21.8 41 0.0014 27.2 2.1 28 218-245 30-57 (156)
53 3ebt_A Uncharacterized NTF2-li 21.1 38 0.0013 26.2 1.7 28 219-246 5-32 (132)
54 1fc3_A SPO0A; response regulat 20.8 42 0.0014 27.8 1.9 30 217-246 63-93 (120)
55 3dm8_A Uncharacterized protein 20.1 24 0.00081 28.5 0.2 27 220-246 7-33 (143)
No 1
>3qk9_A Mitochondrial import inner membrane translocase S TIM44; mitochondrion, protein transport; 3.10A {Saccharomyces cerevisiae} PDB: 2fxt_A
Probab=100.00 E-value=3.2e-58 Score=427.78 Aligned_cols=206 Identities=27% Similarity=0.527 Sum_probs=162.2
Q ss_pred hhhHH-HHHhhcCCCcccccccccCccccccccchHHhhhh-hcccccchhhhhhccccc---ccccChHHHHHHHHHhc
Q 018467 132 SMWSK-LKEKMQGYPVFKRITGISEPVVTKGQEIAEDVRER-WETSDNPIVHKIQDMNET---IFQETDAAASIKEIRRR 206 (355)
Q Consensus 132 s~w~~-~k~~~~~~p~~~~~~~~~~p~~~k~~~~~~d~r~~-~eeSdnP~v~~~~di~d~---lf~ete~a~al~eIk~~ 206 (355)
.+|++ |++|+++||++++|+ |+|++ |||||||+|+++|+|+|+ ||++|+++++|++|+++
T Consensus 7 ~~~~~~w~~fk~~~~~~~~~~---------------~~k~~~~~es~np~i~~~r~itd~v~~~f~~te~a~~l~~Ik~~ 71 (222)
T 3qk9_A 7 ESFGKKVEDFKEKTVVGRSIQ---------------SLKNKLWDESENPLIVVMRKITNKVGGFFAETESSRVYSQFKLM 71 (222)
T ss_dssp --------------------C---------------HHHHHHHHHCCCHHHHHHHHHCC---------CCHHHHTTCC--
T ss_pred hHHHHHHHHHhhcCHHHHHHH---------------HHHhhhcccccCHHHHHHHHHHHhcccccCCCHHHHHHHHHHHh
Confidence 38888 999999999999999 99999 999999999999999984 89999999999999999
Q ss_pred CCCCChhhHHHHHHHHHHH-HHHHHHcCCHHHHHhhcCHHHHHHHHHHHHHHHhCCCcccceEEEecceeEEEEEEeC--
Q 018467 207 DPSFSLPDFVSEVQEAIRP-VLSAYMKGDVETLKKYCSPEVIERCKAEHTAYQSHGIFFDNRILHVSEVEVRETKMMG-- 283 (355)
Q Consensus 207 DP~Fd~~~Fl~~ar~~y~p-IleAy~~GDle~Lk~~cse~~y~~~~a~I~~r~~~G~~~d~kIL~I~~veIv~ak~~~-- 283 (355)
||+|++++|+++|+++|.| ||+||.+||++.||+||++++|+.|+++|++|+++|+++++++|+|++++|++|++++
T Consensus 72 DPsF~~~~Fl~~a~~ai~p~Il~Af~~GD~~~Lk~llse~~y~~f~~~i~~r~~~G~~~d~~il~I~~vdI~~a~~~~~~ 151 (222)
T 3qk9_A 72 DPTFSNESFTRHLREYIVPEILEAYVKGDVKVLKKWFSEAPFNVYAAQQKIFKEQDVYADGRILDIRGVEIVSAKLLAPQ 151 (222)
T ss_dssp ---CCHHHHHHHHHHTHHHHHHHHHHHTCHHHHHHHBCHHHHHHHHHHHHHHHTTTEEECCEEEEEEEEEEEEEEECSSS
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHcCCHHHHHhhcCHHHHHHHHHHHHHHHHCCCEeeeeEeeecceEEEEEEEecCC
Confidence 9999999999999999886 9999999999999999999999999999999999999999999999999999999995
Q ss_pred CeeEEEEEEEEeEEEEEEc-CCCCeecCCCCceeeEEEEEEEEEecccccCCCCCCCCeEEeeeeccccccC
Q 018467 284 SSPIIIVAFQTQQIYCVRD-KHGTITEGGKDTIQTVYYAWAMQQVDAEELGEDVLYPIWKLREMQQLGVQAL 354 (355)
Q Consensus 284 ~~pvitVrF~aQqI~~vRD-k~GeVVeGd~d~I~~v~yvW~f~r~~~eel~~~~~~~~WrL~eiqq~g~~a~ 354 (355)
+.|+|+|+|++|||+|+|| ++|+||+|+|++|.++.|+|+|+| ++++++ +..+|+|+|++|||.|+.+.
T Consensus 152 ~~p~itV~f~aq~i~~~rd~k~GeVVeGd~d~i~~~~~~WtF~R-~~~~~d-~~~tp~WkL~eiq~~~~~~~ 221 (222)
T 3qk9_A 152 DIPVLVVGCRAQEINLYRKKKTGEIAAGDEANILMSSYAMVFTR-DPEQID-DDETEGWKILEFVRGGSRQF 221 (222)
T ss_dssp CCEEEEEEEEEEEECCEEESTTCCCSSSCTTCCEEEEEEEEEEE-CCC---------CEEEEEEECCCCSCC
T ss_pred CceEEEEEEEEEEEEEEEeCCCCccccCCCCCceEEEEEEEEEE-cCccCC-CCCCCCcEEehhhccccccc
Confidence 7999999999999999999 999999999999999999999976 555543 23348999999999998654
No 2
>2cw9_A Translocase of inner mitochondrial membrane; structure genomics, TIM, structural genomics, NPPFSA, riken structural genomics/proteomics initiative; HET: 1PE; 1.90A {Homo sapiens} SCOP: d.17.4.13
Probab=100.00 E-value=1.3e-47 Score=349.23 Aligned_cols=183 Identities=27% Similarity=0.560 Sum_probs=161.8
Q ss_pred hhhhhcccccchhh-------hhhcccccccccChHHHHHHHHHhcCCCCChhhHHHHHHHH-HHHHHHHHHcCCHHHHH
Q 018467 168 VRERWETSDNPIVH-------KIQDMNETIFQETDAAASIKEIRRRDPSFSLPDFVSEVQEA-IRPVLSAYMKGDVETLK 239 (355)
Q Consensus 168 ~r~~~eeSdnP~v~-------~~~di~d~lf~ete~a~al~eIk~~DP~Fd~~~Fl~~ar~~-y~pIleAy~~GDle~Lk 239 (355)
.+++|||||||+|+ +++|++++||++++.+.+|++|+++||+||++.|+++|+.+ |.+||+||.+||++.||
T Consensus 3 ~~~~~~~s~n~~v~~~r~~~~~~~~~~~~~f~~s~~~~~l~~i~~~dp~Fd~~~Fl~~ak~~iy~~Iq~A~~~gD~~~Lr 82 (194)
T 2cw9_A 3 SGSSGDESDNAFIRASRALTDKVTDLLGGLFSKTEMSEVLTEILRVDPAFDKDRFLKQCENDIIPNVLEAMISGELDILK 82 (194)
T ss_dssp ---------CHHHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTHHHHHHHHHHHTCHHHHH
T ss_pred ccccccCCCCceEEeehhhhhhhhhhhccccCCCHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 56789999999995 77788899999999999999999999999999999999999 78899999999999999
Q ss_pred hhcCHHHHHHHHHHHHHHHhCCCcccceEEEecceeEEEEEEeCCeeEEEEEEEEeEEEEEEcCCCCeecCCCCceeeEE
Q 018467 240 KYCSPEVIERCKAEHTAYQSHGIFFDNRILHVSEVEVRETKMMGSSPIIIVAFQTQQIYCVRDKHGTITEGGKDTIQTVY 319 (355)
Q Consensus 240 ~~cse~~y~~~~a~I~~r~~~G~~~d~kIL~I~~veIv~ak~~~~~pvitVrF~aQqI~~vRDk~GeVVeGd~d~I~~v~ 319 (355)
+||||++|+.|+++|++|..+|+++++++|+|++++|++++++++.|+++|+|++|||+|+||++|+||+|+|+.+..+.
T Consensus 83 ~~~t~~~~~~~~~~i~~r~~~g~~~~~~~v~i~~~el~~a~~~~~~~~itV~f~~~~i~~~rd~~G~vveG~~~~~~~v~ 162 (194)
T 2cw9_A 83 DWCYEATYSQLAHPIQQAKALGLQFHSRILDIDNVDLAMGKMVEQGPVLIITFQAQLVMVVRNPKGEVVEGDPDKVLRML 162 (194)
T ss_dssp HHBCHHHHHHHHHHHHHHHHTTCEECCEEEEEEEEEEEEEEEETTEEEEEEEEEEEEECEEECTTSCEEEECTTCCEEEE
T ss_pred HhcCHHHHHHHHHHHHHHHHCCCccccEEEEecccEEEEEEEeCCeeEEEEEEEEEEEEEEECCCCCEecCCCCCceEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEecccccCCCCCCCCeEEeeeeccccccC
Q 018467 320 YAWAMQQVDAEELGEDVLYPIWKLREMQQLGVQAL 354 (355)
Q Consensus 320 yvW~f~r~~~eel~~~~~~~~WrL~eiqq~g~~a~ 354 (355)
|+|+|+|+ ....+| +++|+|++|+|+++.-+
T Consensus 163 e~W~f~R~-~~~~~p---~~~W~L~~iq~~~~~~~ 193 (194)
T 2cw9_A 163 YVWALCRD-QDELNP---YAAWRLLDISASSTEQI 193 (194)
T ss_dssp EEEEEEEC-TTCSCG---GGCEEEEEEEEEECTTC
T ss_pred EEEEEEEe-CCCCCC---CCCEEEEEEcccccccc
Confidence 99999884 332211 23599999999987654
No 3
>4hyz_A Uncharacterized protein; PF13026 family protein, DUF3887, structural genomics, joint for structural genomics, JCSG; 2.25A {Ruminococcus gnavus}
Probab=90.88 E-value=1 Score=36.75 Aligned_cols=79 Identities=9% Similarity=0.014 Sum_probs=50.6
Q ss_pred HhcCCCCChhhHHHHHHHHHHHHHHHHHcCCHHHHHhhcCHHHHHHHHHHH----HHHH-hCCCcccceEEEecceeEEE
Q 018467 204 RRRDPSFSLPDFVSEVQEAIRPVLSAYMKGDVETLKKYCSPEVIERCKAEH----TAYQ-SHGIFFDNRILHVSEVEVRE 278 (355)
Q Consensus 204 k~~DP~Fd~~~Fl~~ar~~y~pIleAy~~GDle~Lk~~cse~~y~~~~a~I----~~r~-~~G~~~d~kIL~I~~veIv~ 278 (355)
+.++..||.+.-...|++ +++-+..||.+.++.+|++++-+.+..+. .+.. +. ..+..+.++.+..
T Consensus 5 ~~l~~~fde~~v~~~A~~----~I~~l~~~dy~~i~~~~~~~lk~~Lt~e~l~~~~~~~~~~-----G~f~s~~~~~~~~ 75 (114)
T 4hyz_A 5 KELPEGFDKETVRKQAME----DIEIAQSKDYESWKSRFTKDLQSSLTEESYDSYLKILEKQ-----GEFKEFGKCTYLG 75 (114)
T ss_dssp SSCCTTCCHHHHHHHHHH----HHHHHHTTCHHHHHTTBCHHHHTTCCHHHHHHHHHHHHTT-----CSEEEEEEEEEEE
T ss_pred hcCChhhhHHHHHHHHHH----HHHHHHhCCHHHHHHHhCHHHHhhCCHHHHHHHHHHHHhc-----CCceeeeceeeee
Confidence 568899999988777775 44566679999999999998855443332 2211 23 4677777777655
Q ss_pred EEEeCCeeEEEEEE
Q 018467 279 TKMMGSSPIIIVAF 292 (355)
Q Consensus 279 ak~~~~~pvitVrF 292 (355)
.. .++....+|-+
T Consensus 76 ~~-~~~~~y~vv~~ 88 (114)
T 4hyz_A 76 QI-KDNKKYGGVII 88 (114)
T ss_dssp EE-ETTEEEEEEEE
T ss_pred ec-cCCCceEEEEE
Confidence 54 33333333333
No 4
>3gzr_A Uncharacterized protein with A NTF2-like fold; structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: MSE GOL; 1.40A {Caulobacter vibrioides}
Probab=88.50 E-value=6.4 Score=32.68 Aligned_cols=108 Identities=13% Similarity=0.156 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHhhcCHHHH------------HHHHHHHHHHHhCCCcccceEEEecceeEEEEEE-eCC
Q 018467 218 EVQEAIRPVLSAYMKGDVETLKKYCSPEVI------------ERCKAEHTAYQSHGIFFDNRILHVSEVEVRETKM-MGS 284 (355)
Q Consensus 218 ~ar~~y~pIleAy~~GDle~Lk~~cse~~y------------~~~~a~I~~r~~~G~~~d~kIL~I~~veIv~ak~-~~~ 284 (355)
..++.+.....||.+||.+.|..++++++- ..+.+-+..+-..... .+. +.+ .+..+.+ .++
T Consensus 7 aI~~l~~~~~~A~~~~D~d~~~~lf~~Da~~~~~~G~~~~Gr~aI~~~~~~~~~~~~~-~~~-~~~---~~~~i~~~~~D 81 (146)
T 3gzr_A 7 AIQALIQAYFTAWNTNAPERFAEIFWPDGSWVNVVGMHWRGRDQIVFAHTAFLKTIFK-DCK-QEL---VTIEARTIAPG 81 (146)
T ss_dssp HHHHHHHHHHHHHHTTCGGGSGGGEEEEEEEECTTCCEEESHHHHHHHHHHHHHTTTT-TCC-EEE---EEEEEEEEETT
T ss_pred HHHHHHHHHHHHHHcCCHHHHHhhccCCeEEEcCCCCeeeCHHHHHHHHHHHhhcccC-CCE-EEE---eEEEEEEcCCC
Confidence 345566668899999999999988777651 2233333333222211 122 222 2233333 356
Q ss_pred eeEEEEEEEEeEEEEEEcCCCCeecCCCCceeeEEEEEEEEEecccccCCCCCCCCeEEeeeec
Q 018467 285 SPIIIVAFQTQQIYCVRDKHGTITEGGKDTIQTVYYAWAMQQVDAEELGEDVLYPIWKLREMQQ 348 (355)
Q Consensus 285 ~pvitVrF~aQqI~~vRDk~GeVVeGd~d~I~~v~yvW~f~r~~~eel~~~~~~~~WrL~eiqq 348 (355)
.+.+..+|.-.- .....|..+ | .......|+|+|. ...|+|+..+-
T Consensus 82 ~A~v~~~~~l~g---~~~~~G~~~---~--~~~~~~t~v~vr~----------dg~WrI~a~h~ 127 (146)
T 3gzr_A 82 SALAVVTLIQDA---YVTPDGRQM---P--RAHDRLTLLAVER----------EGVWRFIHGHN 127 (146)
T ss_dssp EEEEEEEEEECC---EECTTCCEE---C--CEEEEEEEEEEEE----------TTEEEEEEEEE
T ss_pred EEEEEEEEEecc---eeCCCCCcC---C--ccCcEEEEEEEEE----------CCEEEEEEEec
Confidence 777766654321 122344322 1 1345677888774 25799998764
No 5
>3soy_A NTF2-like superfamily protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.00A {Salmonella enterica subsp}
Probab=87.27 E-value=4.1 Score=33.82 Aligned_cols=117 Identities=15% Similarity=0.179 Sum_probs=62.1
Q ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHhhcCHHHHHHH---------HHHH-HHHHhCCC--cccceEEEecceeEEEEEEe
Q 018467 215 FVSEVQEAIRPVLSAYMKGDVETLKKYCSPEVIERC---------KAEH-TAYQSHGI--FFDNRILHVSEVEVRETKMM 282 (355)
Q Consensus 215 Fl~~ar~~y~pIleAy~~GDle~Lk~~cse~~y~~~---------~a~I-~~r~~~G~--~~d~kIL~I~~veIv~ak~~ 282 (355)
=+.+.+.++.....|+..||++.|..++.++..-.| ..++ ..+..... .+...-+.+.+.++ +.+.
T Consensus 8 ~~~ei~~~~~~~~~Al~~~D~~~l~~l~~~~~~~~~i~~~g~~~G~~~i~~~~~~~~~~~~~~~~~~~~~~~~~--I~v~ 85 (145)
T 3soy_A 8 VKQEITEGINRYLYSIDKADPTLGKQLFYVSPETSFIHPRGHERGWSQIAENFYGTTMGKTFSKRTLKLDAPPA--IHVY 85 (145)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHTTTBCCSSSCEEEETTEEEESHHHHHHHCCCCCCCCTEEEEEEEESSCCE--EEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHhCCCCeEEEcCCCcccCHHHHHHHHHHhhhhccccccceEEeeeeE--EEEc
Confidence 345666777778899999999999999866521111 2333 22221111 12233344545442 2455
Q ss_pred CCeeEEEEEEEEeEEEEEEcCCCCeecCCCCceeeEEEEEEEEEecccccCCCCCCCCeEEeeeecccc
Q 018467 283 GSSPIIIVAFQTQQIYCVRDKHGTITEGGKDTIQTVYYAWAMQQVDAEELGEDVLYPIWKLREMQQLGV 351 (355)
Q Consensus 283 ~~~pvitVrF~aQqI~~vRDk~GeVVeGd~d~I~~v~yvW~f~r~~~eel~~~~~~~~WrL~eiqq~g~ 351 (355)
++.++++..+.... ....+|+.+.+ ...|.-+|+|.. +.+|||+..+-.++
T Consensus 86 gd~A~v~~~~~~~~---~~~~~G~~~~~------~~r~T~V~~r~~---------~ggWkIvh~H~S~~ 136 (145)
T 3soy_A 86 GNAAVAEFDWHFTA---VRRDNGQTQHT------TGRESQVWAKIP---------NTGWRIVHVHYSGP 136 (145)
T ss_dssp TTEEEEEEEEEEEE---EETTTCCEEEE------EEEEEEEEEEET---------TTEEEEEEEEEECC
T ss_pred CCEEEEEEEEEEEE---EEcCCCCeeee------EEEEEEEEEEcC---------CCCEEEEEEecCCC
Confidence 77766654432221 11224543332 345555555521 36799999876443
No 6
>3f7s_A Uncharacterized NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; 2.11A {Pseudomonas putida KT2440}
Probab=86.50 E-value=11 Score=30.11 Aligned_cols=28 Identities=14% Similarity=0.213 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHhhcCHH
Q 018467 218 EVQEAIRPVLSAYMKGDVETLKKYCSPE 245 (355)
Q Consensus 218 ~ar~~y~pIleAy~~GDle~Lk~~cse~ 245 (355)
..++.+....+||..||.+.|..+++++
T Consensus 9 ~I~~l~~~~~~A~~~~D~~~~~~l~a~D 36 (142)
T 3f7s_A 9 EIRQLIERWMQAVRDRDIPGIIAPYADD 36 (142)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHTTEEEE
T ss_pred HHHHHHHHHHHHHHcCCHHHHHhhcCCC
Confidence 3455556678899999999999888775
No 7
>2f86_B Hypothetical protein K11E8.1D; UNC-43, oligomerization domain, transferase; 2.64A {Caenorhabditis elegans} SCOP: d.17.4.7
Probab=86.25 E-value=0.48 Score=40.02 Aligned_cols=109 Identities=14% Similarity=0.189 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHhhcCHHHHH--HHH-----HHHHHHHhCCCccc---c--eEEEecceeEEEEEEeC-C
Q 018467 218 EVQEAIRPVLSAYMKGDVETLKKYCSPEVIE--RCK-----AEHTAYQSHGIFFD---N--RILHVSEVEVRETKMMG-S 284 (355)
Q Consensus 218 ~ar~~y~pIleAy~~GDle~Lk~~cse~~y~--~~~-----a~I~~r~~~G~~~d---~--kIL~I~~veIv~ak~~~-~ 284 (355)
....+...+++|+..||.+.+..+|+|++-- -.. .-+...+. + ++ . -...+.+. .+.+.+ +
T Consensus 13 eI~~~~~~~~~Ai~~gD~~~~~~l~~~dv~~Fd~~~~g~~~~g~~~~r~--~-f~~~~~~~~~~~~~~~---~V~~~g~d 86 (143)
T 2f86_B 13 DIVRVTQTLLDAISCKDFETYTRLCDTSMTCFEPEALGNLIEGIEFHRF--Y-FDGNRKNQVHTTMLNP---NVHIIGED 86 (143)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHEEEEEEEECGGGTTCCEETTHHHHT--T-SSSCSCCSCEEEEEEE---EEEEETTT
T ss_pred HHHHHHHHHHHHHHccCHHHHHHhcCCCEEEEccCcCCccccCHHHHHH--H-HhcccCCcceeEEEcc---eEEEeCCC
Confidence 3445556689999999999999888776532 110 11111110 0 11 1 11122222 333456 6
Q ss_pred eeEEEEEEEEeEEEEEEcCCCCeecCCCCceeeEEEEEEEEEecccccCCCCCCCCeEEeeeeccccc
Q 018467 285 SPIIIVAFQTQQIYCVRDKHGTITEGGKDTIQTVYYAWAMQQVDAEELGEDVLYPIWKLREMQQLGVQ 352 (355)
Q Consensus 285 ~pvitVrF~aQqI~~vRDk~GeVVeGd~d~I~~v~yvW~f~r~~~eel~~~~~~~~WrL~eiqq~g~~ 352 (355)
.++++-...++ ..+.+|+.+.+. .+.+.+| +|. ..+|+++-.+..+..
T Consensus 87 ~Av~~y~~~~~----~~~~~G~~~~~~----~r~T~V~--~k~----------~g~WkivH~H~S~~~ 134 (143)
T 2f86_B 87 AACVAYVKLTQ----FLDRNGEAHTRQ----SQESRVW--SKK----------QGRWVCVHVHRSTQP 134 (143)
T ss_dssp EEEEEEEEEEE----EECTTSCEEEEE----EEEEEEE--EEE----------TTEEEEEEEEEEC--
T ss_pred EEEEEEEeeee----eccCCCCeeeEE----EEEEEEE--EEe----------CCcEEEEEEeECCCC
Confidence 77777554554 444556544431 2444444 443 247999999876553
No 8
>2ux0_A Calcium-calmodulin dependent protein kinase (CAM II gamma; transferase, oligomerisation DOM serine- threonine kinase, ATP-binding; 2.46A {Homo sapiens} SCOP: d.17.4.7 PDB: 2w2c_A 1hkx_A*
Probab=86.17 E-value=12 Score=30.03 Aligned_cols=29 Identities=28% Similarity=0.542 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHhhcCHH
Q 018467 217 SEVQEAIRPVLSAYMKGDVETLKKYCSPE 245 (355)
Q Consensus 217 ~~ar~~y~pIleAy~~GDle~Lk~~cse~ 245 (355)
+..+.......+||.+||.+.|..+++++
T Consensus 13 ~~I~~l~~~~~~A~~~~D~~~~~~l~a~d 41 (143)
T 2ux0_A 13 QEIIKITEQLIEAINNGDFEAYTKICDPG 41 (143)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHEEEE
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHhcCCC
Confidence 34556666689999999999999988776
No 9
>3h51_A Putative calcium/calmodulin dependent protein KIN association domain; NP_636218.1; HET: MSE PG4; 1.70A {Xanthomonas campestris PV}
Probab=86.14 E-value=5 Score=33.07 Aligned_cols=109 Identities=12% Similarity=0.176 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHhhcCHHHHHH-------H--HHHHHHHHhCCCcccce-EEEecceeEEEEEEeCCee
Q 018467 217 SEVQEAIRPVLSAYMKGDVETLKKYCSPEVIER-------C--KAEHTAYQSHGIFFDNR-ILHVSEVEVRETKMMGSSP 286 (355)
Q Consensus 217 ~~ar~~y~pIleAy~~GDle~Lk~~cse~~y~~-------~--~a~I~~r~~~G~~~d~k-IL~I~~veIv~ak~~~~~p 286 (355)
...+..+....+||..||++.|..++++++.-. + ..+|.++-...+..... .+.+..+++ ..++.+
T Consensus 20 ~~I~~~~~~~~~A~~~~D~~~l~~l~a~Dav~~~~~~~~~~~G~~~i~~~~~~~~~~~~~~~i~~~~i~~----~~gd~A 95 (156)
T 3h51_A 20 REVAALFDTWNAALATGNPHKVADLYAPDGVLLPTVSNEVRASREQIENYFEMFLTKKPKGVINYRTVRL----LDDDSA 95 (156)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHTTEEEEEEEECSSCSSCBCSHHHHHHHHHHHGGGCCEEEEEEEEEEE----CSSSEE
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHhhcCCCEEEecCCCCccccCHHHHHHHHHHHHhhCCCCcccceEEEE----ecCCeE
Confidence 345566666788999999999998877654100 0 13333332221111111 223333332 135666
Q ss_pred EEEEEEEEeEEEEEEcCCCCeecCCCCceeeEEEEEEEEEecccccCCCCCCCCeEEeeeecc
Q 018467 287 IIIVAFQTQQIYCVRDKHGTITEGGKDTIQTVYYAWAMQQVDAEELGEDVLYPIWKLREMQQL 349 (355)
Q Consensus 287 vitVrF~aQqI~~vRDk~GeVVeGd~d~I~~v~yvW~f~r~~~eel~~~~~~~~WrL~eiqq~ 349 (355)
+++..+... ..+.+|..+ .....|..+|+|. +..|+|+..+-.
T Consensus 96 ~~~~~~~~~----~~~~~G~~~------~~~~r~t~v~~r~----------dG~WkIv~~H~S 138 (156)
T 3h51_A 96 VDAGVYTFT----LTDKNGKKS------DVQARYTFVYEKR----------DGKWLIINHHSS 138 (156)
T ss_dssp EEEEEEEEE----EECTTSCEE------EEEEEEEEEEEEE----------TTEEEEEEEEEE
T ss_pred EEEEEEEEE----EEcCCCCeE------EEEeEEEEEEEEE----------CCEEEEEEEeec
Confidence 666555443 234445322 2346777777664 257999987654
No 10
>3gwr_A Putative calcium/calmodulin-dependent protein KIN II association domain; YP_315894.1; HET: MSE PG4; 2.01A {Thiobacillus denitrificans atcc 25259}
Probab=85.20 E-value=9.6 Score=31.61 Aligned_cols=27 Identities=7% Similarity=0.146 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHhhcCHH
Q 018467 219 VQEAIRPVLSAYMKGDVETLKKYCSPE 245 (355)
Q Consensus 219 ar~~y~pIleAy~~GDle~Lk~~cse~ 245 (355)
.+++.....+||.+||++.|..+.+++
T Consensus 10 ~~~~~~af~~A~~~gD~da~~al~a~d 36 (144)
T 3gwr_A 10 PEAAEDAFYAAFEARSLDDMMAVWARD 36 (144)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHBCSS
T ss_pred HHHHHHHHHHHHHcCCHHHHHhhccCC
Confidence 344455578899999999998877665
No 11
>4i4k_A Uncharacterized protein SGCJ; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: CIT PG4 1PE; 1.70A {Streptomyces globisporus}
Probab=84.51 E-value=13 Score=30.32 Aligned_cols=29 Identities=10% Similarity=0.189 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHhhcCHHH
Q 018467 218 EVQEAIRPVLSAYMKGDVETLKKYCSPEV 246 (355)
Q Consensus 218 ~ar~~y~pIleAy~~GDle~Lk~~cse~~ 246 (355)
..++.+.....||..||.+.|..+++++.
T Consensus 20 ~i~~l~~~y~~A~~~~D~d~~~~lf~~Da 48 (143)
T 4i4k_A 20 AVAALPARIVAAWADHDADRFADVFAEDG 48 (143)
T ss_dssp HHHTHHHHHHHHHHTTCHHHHHTTEEEEE
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHhhcCc
Confidence 44556666889999999999998776654
No 12
>3fsd_A NTF2-like protein of unknown function in nutrient; YP_427473.1, NTF2-like protein of unknown function in nutrie uptake; HET: UNL; 1.70A {Rhodospirillum rubrum atcc 11170} SCOP: d.17.4.0
Probab=84.44 E-value=6.6 Score=31.59 Aligned_cols=106 Identities=13% Similarity=0.215 Sum_probs=59.1
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHhhcCHHHHHH--------HHHHHHHHHhCCCcccceEEEecceeEEEEEEeCC-eeE
Q 018467 217 SEVQEAIRPVLSAYMKGDVETLKKYCSPEVIER--------CKAEHTAYQSHGIFFDNRILHVSEVEVRETKMMGS-SPI 287 (355)
Q Consensus 217 ~~ar~~y~pIleAy~~GDle~Lk~~cse~~y~~--------~~a~I~~r~~~G~~~d~kIL~I~~veIv~ak~~~~-~pv 287 (355)
....+++....+|+.+||.+.|..+|++++.-. -..-+..... |. .+...+ .+.-..+...++ .++
T Consensus 14 ~~I~~l~~~~~~A~~~~D~~~l~~L~~~d~~~v~~~G~~~~~~~~l~~~~~-g~---~~~~~~-~~~~~~v~~~g~d~Av 88 (134)
T 3fsd_A 14 DDIAFYEERLRAAMLTGDLKGLETLLADDLAFVDHTGCVKTKQTHLEPYRA-GL---LKLSRL-DLSDAVVRAAGEDGRV 88 (134)
T ss_dssp CCHHHHHHHHHHHHHHTCHHHHHHHEEEEEEEECTTSCEECHHHHHHHHHT-TC---EEEEEE-EEEEEEEEESSTTEEE
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHhhcCCCEEEECCCCcCccHHHHHHHHHc-CC---ceEEEE-EEeccEEEEeCCCEEE
Confidence 345666777899999999999999988764311 1223333332 31 122222 223344455666 777
Q ss_pred EEEEEEEeEEEEEEcCCCCeecCCCCceeeEEEEEEEEEecccccCCCCCCCC--eEEeeeec
Q 018467 288 IIVAFQTQQIYCVRDKHGTITEGGKDTIQTVYYAWAMQQVDAEELGEDVLYPI--WKLREMQQ 348 (355)
Q Consensus 288 itVrF~aQqI~~vRDk~GeVVeGd~d~I~~v~yvW~f~r~~~eel~~~~~~~~--WrL~eiqq 348 (355)
++.++... . ...|....| ..+.+.+|. |. ..+ |||+..|.
T Consensus 89 v~~~~~~~----~-~~~g~~~~~----~~~~t~vw~--k~----------~g~~gWriv~~h~ 130 (134)
T 3fsd_A 89 VVVRAVTA----G-VYDGEAFTE----TLRFTRIWR--RT----------QGPAGWKLVAGHC 130 (134)
T ss_dssp EEEEEEEE----E-EETTEEEEE----EEEEEEEEE--EE----------TTTTEEEEEEEEE
T ss_pred EEEEEEEE----E-EeCCcEEEE----EEEEEEEEE--EC----------CCCccceEeEeEE
Confidence 77766543 1 112322211 234677774 43 246 99998765
No 13
>3bb9_A Putative orphan protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.80A {Shewanella frigidimarina} SCOP: d.17.4.16
Probab=81.84 E-value=13 Score=30.15 Aligned_cols=29 Identities=10% Similarity=0.227 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHhhcCHHH
Q 018467 218 EVQEAIRPVLSAYMKGDVETLKKYCSPEV 246 (355)
Q Consensus 218 ~ar~~y~pIleAy~~GDle~Lk~~cse~~ 246 (355)
.+++.+....+||..||.+.|..++++++
T Consensus 31 ~i~~~~~~~~~A~~~~D~~~l~~l~a~Da 59 (148)
T 3bb9_A 31 AAGNVVKQFHAALQMGNEAIVRQSLAANV 59 (148)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHEEEEE
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHhhCCCe
Confidence 44555666778999999999999888763
No 14
>2r4i_A Uncharacterized protein; NTF2-like protein, structural genomics, joint center for STR genomics, JCSG; HET: MSE CIT; 1.60A {Cytophaga hutchinsonii atcc 33406} SCOP: d.17.4.15
Probab=80.28 E-value=12 Score=28.66 Aligned_cols=30 Identities=20% Similarity=0.342 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHhhcCHHH
Q 018467 217 SEVQEAIRPVLSAYMKGDVETLKKYCSPEV 246 (355)
Q Consensus 217 ~~ar~~y~pIleAy~~GDle~Lk~~cse~~ 246 (355)
+........+.+|+.+||.+.|..+|++++
T Consensus 6 ~~i~~l~~~~~~A~~~~D~~~l~~l~~~d~ 35 (123)
T 2r4i_A 6 DVILDCEKKLLTAIQNNDVESLEVLLHDDL 35 (123)
T ss_dssp HHHTHHHHHHHHHHHHTCHHHHHHHEEEEE
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHhhhCcCe
Confidence 345556666889999999999999988763
No 15
>3hx8_A MLR2180 protein, putative ketosteroid isomerase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE UNL PG4; 1.45A {Mesorhizobium loti}
Probab=79.13 E-value=19 Score=27.51 Aligned_cols=111 Identities=14% Similarity=0.120 Sum_probs=62.2
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHhhcCHHHH------------HHHHHHHHHHHhCCCcccceEEEecceeEEEEEEeCC
Q 018467 217 SEVQEAIRPVLSAYMKGDVETLKKYCSPEVI------------ERCKAEHTAYQSHGIFFDNRILHVSEVEVRETKMMGS 284 (355)
Q Consensus 217 ~~ar~~y~pIleAy~~GDle~Lk~~cse~~y------------~~~~a~I~~r~~~G~~~d~kIL~I~~veIv~ak~~~~ 284 (355)
...+..+.....||..||++.|..++++++. +.+.+-....-..+. .-+.+. ...+...++
T Consensus 6 ~~I~~~~~~~~~a~~~~D~~~~~~l~a~Da~~~~~~~~~~~G~~~i~~~~~~~~~~~~----~~~~~~---~~~v~~~gd 78 (129)
T 3hx8_A 6 EAIEAANADFVKAYNSKDAAGVASKYMDDAAAFPPDMARVDGRQNIQKLWQGAMDMGI----SELKLT---TLDVQESGD 78 (129)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHTTEEEEEEEECTTSCCEESHHHHHHHHHHHHHTTC----EEEEEE---EEEEEEETT
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHhhCCCeEEeCCCCCcccCHHHHHHHHHHHHhCCC----ceEEEE---EEEEEcCCC
Confidence 3455666667899999999999988876531 222333333223331 122232 333345677
Q ss_pred eeEEEEEEEEeEEEEEEcCCCCeecCCCCceeeEEEEEEEEEecccccCCCCCCCCeEEeeeecccccc
Q 018467 285 SPIIIVAFQTQQIYCVRDKHGTITEGGKDTIQTVYYAWAMQQVDAEELGEDVLYPIWKLREMQQLGVQA 353 (355)
Q Consensus 285 ~pvitVrF~aQqI~~vRDk~GeVVeGd~d~I~~v~yvW~f~r~~~eel~~~~~~~~WrL~eiqq~g~~a 353 (355)
.++++.++... ....+|+.+. ....|+.+|+|.. +..|++..-.-+..+|
T Consensus 79 ~A~~~~~~~~~----~~~~~G~~~~------~~g~~~~v~~r~~---------dG~W~i~~~~~~~~~~ 128 (129)
T 3hx8_A 79 FAFESGSFSLK----APGKDSKLVD------AAGKYVVVWRKGQ---------DGGWKLYRDIWNSDPA 128 (129)
T ss_dssp EEEEEEEEEEE----EECTTSCEEE------EEEEEEEEEEECT---------TSCEEEEEEEEEECCC
T ss_pred EEEEEEEEEEE----eeCCCCCeee------eeEEEEEEEEECC---------CCcEEEEEeecccccc
Confidence 77777666554 2234453221 2456777776530 2579998766554443
No 16
>3cnx_A Uncharacterized protein; putative dehydratase, NTF2-like protein, structural genomics center for structural genomics, JCSG; HET: MSE PGE PG6; 2.10A {Streptomyces avermitilis} SCOP: d.17.4.17
Probab=78.37 E-value=33 Score=29.70 Aligned_cols=29 Identities=28% Similarity=0.260 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHhhcCHHH
Q 018467 218 EVQEAIRPVLSAYMKGDVETLKKYCSPEV 246 (355)
Q Consensus 218 ~ar~~y~pIleAy~~GDle~Lk~~cse~~ 246 (355)
..+.+.....+||.+||.+.|..+.+++.
T Consensus 13 ~I~~~~~~~~~A~~~gD~~~l~alwa~d~ 41 (170)
T 3cnx_A 13 QVGLANTAFYEAMERGDFETLSSLWLTPA 41 (170)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHBCCHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhcCCc
Confidence 34455556789999999999998666654
No 17
>3rob_A Uncharacterized conserved protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.48A {Planctomyces limnophilus}
Probab=77.81 E-value=28 Score=28.63 Aligned_cols=101 Identities=14% Similarity=0.116 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHhhcCHHHH-----------HHHHHHHHHHHhCCCcccceEEEecceeEEEEEEeCCeeE
Q 018467 219 VQEAIRPVLSAYMKGDVETLKKYCSPEVI-----------ERCKAEHTAYQSHGIFFDNRILHVSEVEVRETKMMGSSPI 287 (355)
Q Consensus 219 ar~~y~pIleAy~~GDle~Lk~~cse~~y-----------~~~~a~I~~r~~~G~~~d~kIL~I~~veIv~ak~~~~~pv 287 (355)
.++.+.....|+..||.+.|..++++++. ..|.+.... +.. .-.+.+ ..++..+.+.++.++
T Consensus 19 I~~l~~~~~~A~~~gD~~~l~al~a~D~v~~~~g~~~~Gr~ai~a~~~~----~~~--~~~~~~-~~~~~~i~v~GD~A~ 91 (139)
T 3rob_A 19 IRTVQYRWLEATRKFDRQVLSSLMTDDVVFLTPGRLPFGKEEFLAACEQ----NDQ--RVIIEA-SATFEEIVIVEPMAY 91 (139)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHTEEEEEEEECTTSCCBCHHHHHHHHHH----HHH--HEEEEE-EEEEEEEEEETTEEE
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHccCcEEEECCCCCccCHHHHHHHHHH----HHH--hcCCCC-ceEEEEEEEcCCeEE
Confidence 34445556788899999999987766543 111211111 110 011222 344555566788777
Q ss_pred EEEEEEEeEEEEEEcC-CCCeecCCCCceeeEEEEEEEEEecccccCCCCCCCCeEEee
Q 018467 288 IIVAFQTQQIYCVRDK-HGTITEGGKDTIQTVYYAWAMQQVDAEELGEDVLYPIWKLRE 345 (355)
Q Consensus 288 itVrF~aQqI~~vRDk-~GeVVeGd~d~I~~v~yvW~f~r~~~eel~~~~~~~~WrL~e 345 (355)
+.-.++.. .++. .|. ..-....++++|+|.. +..|+|.-
T Consensus 92 ~~~~~~~~----~t~~~~g~------~~~~~g~~~~v~rK~~---------dG~W~i~~ 131 (139)
T 3rob_A 92 TRTHLHIK----VTPRSGGA------VRELAGHAMSIFRRSM---------FGEWQLAR 131 (139)
T ss_dssp EEEEEEEE----EEETTSCC------CEEEEEEEEEEEEECT---------TSCEEEEE
T ss_pred EEEEEEEE----EecCCCCc------eeEeeccEEEEEEECC---------CCcEEEEE
Confidence 77666654 4443 332 2223456888886621 36799864
No 18
>3ksp_A Calcium/calmodulin-dependent kinase II associatio; cystatin-like fold, structural genomics, joint center for ST genomics, JCSG; HET: MSE NHE; 2.59A {Exiguobacterium sibiricum 255-15}
Probab=77.14 E-value=14 Score=30.72 Aligned_cols=98 Identities=9% Similarity=0.035 Sum_probs=56.3
Q ss_pred HHHHHHcCCHHHHHhhcCHHHHHH--------HHHHHHHHHhCCCcccceEEEecceeEEEEEEeCCeeEEEEEEEEeEE
Q 018467 226 VLSAYMKGDVETLKKYCSPEVIER--------CKAEHTAYQSHGIFFDNRILHVSEVEVRETKMMGSSPIIIVAFQTQQI 297 (355)
Q Consensus 226 IleAy~~GDle~Lk~~cse~~y~~--------~~a~I~~r~~~G~~~d~kIL~I~~veIv~ak~~~~~pvitVrF~aQqI 297 (355)
-..|..+||.+.|..+++++.... -..-|......|.. ....++..+ ..+.+.++.++++.+....-
T Consensus 18 ~~~A~~~~D~~~L~~LL~ddf~~v~~sG~~~~K~~~L~~~~~~~~~-~~~~~~~~~---~~vr~~gd~AvVt~~~~~~~- 92 (129)
T 3ksp_A 18 RHAYLMEGNREAMHQLLSSDFSFIDGQGRQFDAETYLDHYVDPDQI-QWSNQISES---MVVEVFETTALVQEIVEDHF- 92 (129)
T ss_dssp HHHHHHHTCHHHHHHHEEEEEEEECTTCCEECHHHHHHHHSCTTTE-EEEEEEEEE---EEEEECSSEEEEEEEEEEEE-
T ss_pred HHHHHHhCCHHHHHhhcCCCEEEECCCCCCcCHHHHHHHhccCCCc-cceeecccc---eeEEEECCEEEEEEEEEEEE-
Confidence 567889999999999998875321 13334433333321 122222322 24556678887777665541
Q ss_pred EEEEcCCCCeecCCCCceeeEEEEEEEEEecccccCCCCCCCCeEEeeeec
Q 018467 298 YCVRDKHGTITEGGKDTIQTVYYAWAMQQVDAEELGEDVLYPIWKLREMQQ 348 (355)
Q Consensus 298 ~~vRDk~GeVVeGd~d~I~~v~yvW~f~r~~~eel~~~~~~~~WrL~eiqq 348 (355)
. -.|+.+.|. -.+..+|.. . ..+|+|+.-|-
T Consensus 93 --~--~~g~~~~~~----~~~t~VW~~--~----------~g~Wrlva~q~ 123 (129)
T 3ksp_A 93 --S--YGRSMYIGR----FRSVSLYHW--A----------NEGWKWHFHQL 123 (129)
T ss_dssp --E--ETTEEEEEE----EEEEEEEEE--E----------TTEEEEEEEEE
T ss_pred --e--cCCeEEeEE----EEEEEEEEE--e----------CCeeEEEEEee
Confidence 1 134333332 357888843 2 36799998764
No 19
>3blz_A NTF2-like protein of unknown function; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.75A {Shewanella baltica} SCOP: d.17.4.14
Probab=70.90 E-value=18 Score=28.80 Aligned_cols=94 Identities=9% Similarity=-0.009 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHhhcCHHHHH---------------HHHHHHHHHHhCCCcccceEEEecceeEEEEEEe
Q 018467 218 EVQEAIRPVLSAYMKGDVETLKKYCSPEVIE---------------RCKAEHTAYQSHGIFFDNRILHVSEVEVRETKMM 282 (355)
Q Consensus 218 ~ar~~y~pIleAy~~GDle~Lk~~cse~~y~---------------~~~a~I~~r~~~G~~~d~kIL~I~~veIv~ak~~ 282 (355)
..++.+....+|+.+||.+.|+..++|++.- .|...+.. .........-. |..+.+.
T Consensus 13 aI~~~~~~y~~a~~~~D~~~l~~~f~~da~~~~~~~~g~~~~~~~~~~~~~~~~---~~~~~~~~~~~-----i~~i~i~ 84 (128)
T 3blz_A 13 AIVEVLSKYNEGGKKADSTIMRPAFSSQATIFGVDVDNKLTGGPIQGLFDVIDN---VFHPSPEAKAA-----IARIDIV 84 (128)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHGGGEEEEEEEEEECTTSCEEEEETHHHHHHHHH---TCCCCTTCEEE-----EEEEEEE
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHhhCCCcEEEEEeCCCcEEecCHHHHHHHHHh---cCCCCccccCe-----EEEEEEE
Confidence 4455555577899999999999888877432 22222222 10000111111 4455666
Q ss_pred CCeeEEEEEEEEeEEEEEEcCCCCeecCCCCceeeEEEEEEEEEecccccCCCCCCCCeEEeeee
Q 018467 283 GSSPIIIVAFQTQQIYCVRDKHGTITEGGKDTIQTVYYAWAMQQVDAEELGEDVLYPIWKLREMQ 347 (355)
Q Consensus 283 ~~~pvitVrF~aQqI~~vRDk~GeVVeGd~d~I~~v~yvW~f~r~~~eel~~~~~~~~WrL~eiq 347 (355)
++.+.+.+.+. ...| ....+.++|.|. +..|+|+...
T Consensus 85 gd~A~a~~~~~-------------~~~~-----~~~~d~~~l~k~----------dg~WkI~~~~ 121 (128)
T 3blz_A 85 GTAASARIDTD-------------DISG-----FRFTDFFNLLKV----------EGKWTVVSKI 121 (128)
T ss_dssp TTEEEEEEEEE-------------EETT-----EEEEEEEEEEEE----------TTEEEEEEEE
T ss_pred CCEEEEEEEEE-------------EcCC-----CceEEeEEEEEE----------CCEEEEEEEE
Confidence 78888877763 0111 245778888775 3579998753
No 20
>3duk_A NTF2-like protein of unknown function; structural genomics, joint center for STR genomics, JCSG, protein structure initiative; HET: MSE; 2.20A {Methylobacillus flagellatus KT} SCOP: d.17.4.0
Probab=68.26 E-value=37 Score=27.27 Aligned_cols=90 Identities=10% Similarity=0.133 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHhhcCHHH---------------HHHHHHHHHHHHhCCCcccceEEEecceeEEEEEEeC
Q 018467 219 VQEAIRPVLSAYMKGDVETLKKYCSPEV---------------IERCKAEHTAYQSHGIFFDNRILHVSEVEVRETKMMG 283 (355)
Q Consensus 219 ar~~y~pIleAy~~GDle~Lk~~cse~~---------------y~~~~a~I~~r~~~G~~~d~kIL~I~~veIv~ak~~~ 283 (355)
.++.+....+++.+||.+.|+..++|++ +..|...+.++ ... .... ..|..+.+.+
T Consensus 14 I~~~l~~y~~g~~~~D~~~l~~~f~pda~~~~~~~G~~l~~~~~~e~~~~v~~~-~p~--~~~~------~~I~~I~i~g 84 (125)
T 3duk_A 14 ITEVLNVYMNAAESGTGEEMSAAFHKDATIFGYVGDKLAFNGPIKDLYDWHNSN-GPA--KNVQ------SRITNIDIVG 84 (125)
T ss_dssp HHHHHHHHHHHHHHCCHHHHGGGEEEEEEEEEEETTEEEEEEETHHHHHHHHHH-CCC--TTCE------EEEEEEEEET
T ss_pred HHHHHHHHHHHHHhcCHHHHHHhCCCCcEEEEEcCCCEEeeCCHHHHHHHHhcc-CCC--Cccc------ceEEEEEEEC
Confidence 3444444668888999999999888876 24555555544 111 1111 2445566677
Q ss_pred CeeEEEEEEEEeEEEEEEcCCCCeecCCCCceeeEEEEEEEEEecccccCCCCCCCCeEEee
Q 018467 284 SSPIIIVAFQTQQIYCVRDKHGTITEGGKDTIQTVYYAWAMQQVDAEELGEDVLYPIWKLRE 345 (355)
Q Consensus 284 ~~pvitVrF~aQqI~~vRDk~GeVVeGd~d~I~~v~yvW~f~r~~~eel~~~~~~~~WrL~e 345 (355)
+.+.+.|.+.. -. | ..+.+..+|.+. +..|+|+.
T Consensus 85 d~A~a~v~~~~--------~~-----~-----~~f~D~l~L~k~----------dg~WkIv~ 118 (125)
T 3duk_A 85 TVAHARVEAEN--------WT-----N-----FKFSDLFLLLKL----------DGKWTIVN 118 (125)
T ss_dssp TEEEEEEEEEC--------SS-----S-----CCEEEEEEEEEE----------TTEEEEEE
T ss_pred CEEEEEEEEEE--------cC-----C-----CeEEEEEEEEEe----------CCEEEEEE
Confidence 77777765520 00 1 256888999774 36799986
No 21
>3ejv_A Uncharacterized protein with cystatin-like fold; structural genomics, joint center for ST genomics, JCSG; HET: MSE PGE; 1.40A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID} SCOP: d.17.4.28
Probab=67.33 E-value=26 Score=30.03 Aligned_cols=117 Identities=14% Similarity=0.130 Sum_probs=62.4
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHhhcCHHHHHHH----------------HHHHHHHHhCCCc----ccceEEEecceeEE
Q 018467 218 EVQEAIRPVLSAYMKGDVETLKKYCSPEVIERC----------------KAEHTAYQSHGIF----FDNRILHVSEVEVR 277 (355)
Q Consensus 218 ~ar~~y~pIleAy~~GDle~Lk~~cse~~y~~~----------------~a~I~~r~~~G~~----~d~kIL~I~~veIv 277 (355)
..++.+..-..|++.+|.+.+..+++|++.-.+ ..+|.+.-...+. .....-.+.+..|
T Consensus 27 ~I~~l~~~y~~~~D~~d~d~~~~lFt~D~~~~~~~~~Gg~~g~~~~~~Gr~aI~~~~~~~~~~~~~~~~t~H~~~n~~I- 105 (179)
T 3ejv_A 27 IILNVLGQYTRAHDRRDPDAMAALFAPEATIEIVDAVGGASRSISRLEGRDAIRVAVRQMMAPHGYRAWSQNVVNAPII- 105 (179)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHTTEEEEEEEEEEECGGGCCEEEEEEESHHHHHHHHHHSSCCCCTTEEEEEEEEEEEE-
T ss_pred HHHHHHHHHHHHHhCCCHHHHHhhcCCceEEEEeccCCCcCCCcceecCHHHHHHHHHHhhcccccccceEEEcCCCEE-
Confidence 344444556688889999999998887653111 3455555332221 1222222333333
Q ss_pred EEEEeCCeeEEEEEEEEeEEEEEEcCCCC---eecCCC---CceeeEEEEEEEEEecccccCCCCCCCCeEEeeee
Q 018467 278 ETKMMGSSPIIIVAFQTQQIYCVRDKHGT---ITEGGK---DTIQTVYYAWAMQQVDAEELGEDVLYPIWKLREMQ 347 (355)
Q Consensus 278 ~ak~~~~~pvitVrF~aQqI~~vRDk~Ge---VVeGd~---d~I~~v~yvW~f~r~~~eel~~~~~~~~WrL~eiq 347 (355)
.+.++.+.++++..........+.+|. ++-|.- .-+..-.|.-.|+|. ..+||+....
T Consensus 106 --~vdgD~A~~~~~~y~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~g~Y~D~~~R~----------dg~Wri~~r~ 169 (179)
T 3ejv_A 106 --VIEGDHAVLDAQFMVFSILAAEVPDGGWPTGTFGAQGRIVPIEAGQYRLTLRTV----------ADGWVISAMR 169 (179)
T ss_dssp --EEETTEEEEEEEEEEEEEEECCCCTTCCCTTCCSCCEEEEEEEEEEEEEEEEEE----------TTEEEEEEEE
T ss_pred --EEcCCeeEEEEEEEEEEEEeeccCCCCCcceeecccccccccccceEEEEEEEE----------CCeEEEEEEE
Confidence 346777755666655544443322331 111111 123344588888775 2579998864
No 22
>3fka_A Uncharacterized NTF-2 like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.69A {Silicibacter pomeroyi dss-3}
Probab=66.01 E-value=38 Score=27.01 Aligned_cols=87 Identities=10% Similarity=0.063 Sum_probs=53.1
Q ss_pred HHHHHHHHHHcCCHHHHHhhcCHHH--------------HHHHHHHHHHHHh-CCCcccceEEEecceeEEEEEEeCCee
Q 018467 222 AIRPVLSAYMKGDVETLKKYCSPEV--------------IERCKAEHTAYQS-HGIFFDNRILHVSEVEVRETKMMGSSP 286 (355)
Q Consensus 222 ~y~pIleAy~~GDle~Lk~~cse~~--------------y~~~~a~I~~r~~-~G~~~d~kIL~I~~veIv~ak~~~~~p 286 (355)
.+..-.+++.+||.+.|+.-++|++ ...|.. +..... .+.. +...|..+.+.++.+
T Consensus 14 ~l~~Y~~g~~~~D~~~l~~~FhpdA~~~~~~~g~~~~~~~~~~~~-v~~~p~~~~~~--------~~~~i~~I~i~gd~A 84 (120)
T 3fka_A 14 LVETYVMAMTRGDRPALERIFFGKASEVGHYEGELLWNSRDAFIA-MCEDAADAETD--------PFWAISSVSVQGDIA 84 (120)
T ss_dssp HHHHHHHHHHHTCHHHHHHHEEEEEEEEEEETTEEEEEEHHHHHH-HHHHHCCSSCC--------CCEEEEEEEEETTEE
T ss_pred HHHHHHHHHHhcCHHHHHhhCCCCeEEEEecCCcEEEcCHHHHHh-hcCCccCCCCC--------ceEEEEEEEEECCEE
Confidence 3333567778899999999888877 456666 653221 1111 122333344556777
Q ss_pred EEEEEEEEeEEEEEEcCCCCeecCCCCceeeEEEEEEEEEecccccCCCCCCCCeEEeee
Q 018467 287 IIIVAFQTQQIYCVRDKHGTITEGGKDTIQTVYYAWAMQQVDAEELGEDVLYPIWKLREM 346 (355)
Q Consensus 287 vitVrF~aQqI~~vRDk~GeVVeGd~d~I~~v~yvW~f~r~~~eel~~~~~~~~WrL~ei 346 (355)
.+.|.+.- .| ..+.+..+|.+. +..|+++.-
T Consensus 85 ~a~v~~~~--------------~~-----~~f~D~~~L~k~----------dg~WkIv~K 115 (120)
T 3fka_A 85 MLHVENDW--------------AG-----MRFDDFLTVLLH----------EGSWRIVSK 115 (120)
T ss_dssp EEEEEEEE--------------TT-----EEEEEEEEEEEE----------TTEEEEEEE
T ss_pred EEEEEEEc--------------CC-----CceEEEEEEEEe----------CCEEEEEEE
Confidence 77776321 11 367899999775 367999863
No 23
>3b7c_A Uncharacterized protein; NTF-2 like protein, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.70A {Shewanella oneidensis} SCOP: d.17.4.16
Probab=61.07 E-value=46 Score=25.93 Aligned_cols=29 Identities=10% Similarity=0.318 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHhhc--CHHH
Q 018467 218 EVQEAIRPVLSAYMKGDVETLKKYC--SPEV 246 (355)
Q Consensus 218 ~ar~~y~pIleAy~~GDle~Lk~~c--se~~ 246 (355)
..+..+....+||.+||++.|-.+. ++++
T Consensus 6 ~I~~~~~~~~~A~~~~D~~~~~~~y~~~~d~ 36 (122)
T 3b7c_A 6 DIVQLLKGQEEAWNRGDLDAYMQGYWQNEQL 36 (122)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHTTBCCSTTC
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhcCCCCE
Confidence 3445555688999999999987744 4543
No 24
>2gxf_A Hypothetical protein YYBH; alpha-beta protein., structural genomics, PSI, protein structure initiative; HET: MES; 3.10A {Bacillus subtilis} SCOP: d.17.4.22
Probab=59.88 E-value=30 Score=27.62 Aligned_cols=111 Identities=14% Similarity=0.128 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHhhcCHHH-HHH-------HHHHHHHHHhCCCc-ccce-EEEecceeEEEEEEeCCeeE
Q 018467 218 EVQEAIRPVLSAYMKGDVETLKKYCSPEV-IER-------CKAEHTAYQSHGIF-FDNR-ILHVSEVEVRETKMMGSSPI 287 (355)
Q Consensus 218 ~ar~~y~pIleAy~~GDle~Lk~~cse~~-y~~-------~~a~I~~r~~~G~~-~d~k-IL~I~~veIv~ak~~~~~pv 287 (355)
..++.+....+||..||.+.|..++++++ +-. =..+|.++-..-+. +... .+.+.++. +...++.++
T Consensus 4 ~I~~l~~~~~~A~~~~D~d~~~~lfa~Dav~~~~~g~~~~G~~aI~~~~~~~~~~~~~~~~~~~~~~~---v~~~gd~A~ 80 (142)
T 2gxf_A 4 QLKDIISACDLAIQNEDFDTLMNYYSEDAVLVVKPGMIARGKEEIKKAFITIANYFNHHIVPTQGKMI---LLEAGDTVL 80 (142)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHTTSEEEEEEEECSSSCEEEHHHHHHHHHHHTTSCCCSSCCCEEEEEE---EEEETTEEE
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHhcCCCEEEEcCCCCcccCHHHHHHHHHHHHHhhCCCceEEEEEEE---EEEcCCEEE
Confidence 34566666889999999999998777643 200 02334433322111 0111 11122222 334577777
Q ss_pred EEEEEEEeEEEEEEcCCCCeecCCCCceeeEEEEEEEEEecccccCCCCCCCCeEEeeeecccc
Q 018467 288 IIVAFQTQQIYCVRDKHGTITEGGKDTIQTVYYAWAMQQVDAEELGEDVLYPIWKLREMQQLGV 351 (355)
Q Consensus 288 itVrF~aQqI~~vRDk~GeVVeGd~d~I~~v~yvW~f~r~~~eel~~~~~~~~WrL~eiqq~g~ 351 (355)
++..+... .+.+| .+- .....|+.+|+|.. +..||++-=.-.|.
T Consensus 81 ~~~~~~~~-----~~~~G-----~~~-~~~g~~t~v~~r~~---------dG~Wri~~d~~~~~ 124 (142)
T 2gxf_A 81 VLSQTLLD-----SDKKD-----SEY-AMERRATYVFKKNA---------QGEWLCVIDNSYGT 124 (142)
T ss_dssp EEEEEECC-----C---------------EEEEEEEEEECT---------TSCEEEEEEETTGG
T ss_pred EEEEEEEE-----ECCCC-----CeE-eeeEEEEEEEEECC---------CCCEEEEEECCCCc
Confidence 77666532 12333 221 13456788886621 25699876555444
No 25
>3d9r_A Ketosteroid isomerase-like protein; YP_049581.1, structural joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 2.40A {Pectobacterium atrosepticum} SCOP: d.17.4.27
Probab=56.76 E-value=64 Score=24.69 Aligned_cols=28 Identities=14% Similarity=0.283 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHhhcCHH
Q 018467 218 EVQEAIRPVLSAYMKGDVETLKKYCSPE 245 (355)
Q Consensus 218 ~ar~~y~pIleAy~~GDle~Lk~~cse~ 245 (355)
.+++.+....+||..||.+.|..+++++
T Consensus 12 ~i~~~~~~~~~a~~~~D~~~~~~l~a~D 39 (135)
T 3d9r_A 12 VIEAAAIAYLTAFNRADIPAVIATYTDD 39 (135)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHTEEEE
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHhcCCC
Confidence 3555666678899999999999877665
No 26
>3ehc_A Snoal-like polyketide cyclase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.12A {Agrobacterium tumefaciens str}
Probab=52.80 E-value=45 Score=25.91 Aligned_cols=28 Identities=11% Similarity=0.220 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHhhcCHHH
Q 018467 219 VQEAIRPVLSAYMKGDVETLKKYCSPEV 246 (355)
Q Consensus 219 ar~~y~pIleAy~~GDle~Lk~~cse~~ 246 (355)
.++.+....+||.+||++.|..+|+|++
T Consensus 5 ~~~~v~~~~~~~~~~d~~~~~~~~a~d~ 32 (128)
T 3ehc_A 5 LNDIYLAYLDSLNHQAFDELGTFVDDNV 32 (128)
T ss_dssp HHHHHHHHHHHHHTTCGGGGGGTEEEEE
T ss_pred HHHHHHHHHHHHhcCCHHHHHHhcCcce
Confidence 3556666778999999999999998764
No 27
>2rcd_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.32A {Pectobacterium atrosepticum SCRI1043} SCOP: d.17.4.18
Probab=50.75 E-value=87 Score=24.46 Aligned_cols=30 Identities=20% Similarity=0.205 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHhhcCHH
Q 018467 216 VSEVQEAIRPVLSAYMKGDVETLKKYCSPE 245 (355)
Q Consensus 216 l~~ar~~y~pIleAy~~GDle~Lk~~cse~ 245 (355)
+..++..|.....|+..||++.|..+.+++
T Consensus 13 ~~ei~~~~~~y~~A~~~~D~~~l~~lf~~d 42 (129)
T 2rcd_A 13 LADVTAAFYRYEKALTGNDVAVLDELFWHD 42 (129)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHBCCS
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHhccCC
Confidence 445666666677999999999999988876
No 28
>2kfe_A Meucin-24; alpha-helix, antimicrobial protein; NMR {Synthetic}
Probab=45.66 E-value=6 Score=24.53 Aligned_cols=16 Identities=38% Similarity=0.632 Sum_probs=13.6
Q ss_pred ChhhhhhhHHhhhhhc
Q 018467 1 MKEKISAATEEVKGTF 16 (355)
Q Consensus 1 ~~~~~~~~~~~~~~~~ 16 (355)
||+|+|+|.+.||.+.
T Consensus 10 iK~kl~~akdK~k~~w 25 (26)
T 2kfe_A 10 LKEKLSGVKEKMKNSX 25 (26)
T ss_dssp HHHHHHHHHHHTTTC-
T ss_pred HHHHHHHHHHHHHccC
Confidence 5899999999999764
No 29
>2gey_A ACLR protein; alpha+beta barrel, oxidoreductase; HET: PG4; 1.80A {Streptomyces galilaeus} SCOP: d.17.4.9
Probab=45.48 E-value=1e+02 Score=24.93 Aligned_cols=27 Identities=19% Similarity=0.258 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHhhcCHH
Q 018467 219 VQEAIRPVLSAYMKGDVETLKKYCSPE 245 (355)
Q Consensus 219 ar~~y~pIleAy~~GDle~Lk~~cse~ 245 (355)
.++.+....+||..||++.|..+++++
T Consensus 6 ~~~~v~~~~~a~~~~D~~~~~~~~a~D 32 (158)
T 2gey_A 6 RKALCLEMVAAWNRWDLSGIIKHWSPD 32 (158)
T ss_dssp HHHHHHHHHHHHHTTCTHHHHTTEEEE
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHcCCC
Confidence 455666677899999999999988764
No 30
>3b8l_A Uncharacterized protein; putative aromatic ring hydroxylase, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.75A {Novosphingobium aromaticivorans} SCOP: d.17.4.28
Probab=45.16 E-value=1.1e+02 Score=24.75 Aligned_cols=27 Identities=11% Similarity=0.213 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHHc-CCHHHHHhhcCHH
Q 018467 219 VQEAIRPVLSAYMK-GDVETLKKYCSPE 245 (355)
Q Consensus 219 ar~~y~pIleAy~~-GDle~Lk~~cse~ 245 (355)
+++.+.....|+.. +|.+.+..+++|+
T Consensus 30 I~~l~~~y~~alD~~~D~d~~~~lfteD 57 (163)
T 3b8l_A 30 IQDLMIAYAHAVDTVSDIDAVLDVFTED 57 (163)
T ss_dssp HHHHHHHHHHHHHTTSCHHHHHTTEEEE
T ss_pred HHHHHHHHHHHHCcCCCHHHHHhhcCCC
Confidence 44444456678888 9999998876664
No 31
>3dmc_A NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2, unknow function; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.17.4.10
Probab=42.70 E-value=6.6 Score=31.98 Aligned_cols=32 Identities=3% Similarity=0.094 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHhhcCHHH
Q 018467 215 FVSEVQEAIRPVLSAYMKGDVETLKKYCSPEV 246 (355)
Q Consensus 215 Fl~~ar~~y~pIleAy~~GDle~Lk~~cse~~ 246 (355)
=+..++++|...++|+..||++.|..++++++
T Consensus 10 ~~~~~~~~~~~f~~A~~~gD~~~l~~lla~D~ 41 (134)
T 3dmc_A 10 TLKVAHQGFEFFTQGLATGEWQKFLDMLTEDF 41 (134)
T ss_dssp HHHHHHHHHHHHHHHHHHSCCHHHHTTEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHcCCCE
Confidence 35677888888999999999999998876543
No 32
>3cu3_A Domain of unknown function with A cystatin-like F; structural genomics, joint center for structural genomics, J protein structure initiative; 2.00A {Nostoc punctiforme} SCOP: d.17.4.28
Probab=41.62 E-value=1.4e+02 Score=24.35 Aligned_cols=29 Identities=21% Similarity=0.276 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHhhcCHH
Q 018467 217 SEVQEAIRPVLSAYMKGDVETLKKYCSPE 245 (355)
Q Consensus 217 ~~ar~~y~pIleAy~~GDle~Lk~~cse~ 245 (355)
...++.+.....||..||.+.|..+.+++
T Consensus 16 ~aI~~~~~~~~~A~~~~D~d~~~~lfa~D 44 (172)
T 3cu3_A 16 SAIRAFHRQMIDAWNRGSGEGFAAPFSET 44 (172)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHTTEEEE
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHhhcCCC
Confidence 34556666688999999999999876665
No 33
>3g0k_A Putative membrane protein; snoal-like polyketide cyclase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.30A {Novosphingobium aromaticivorans}
Probab=40.75 E-value=64 Score=26.48 Aligned_cols=29 Identities=10% Similarity=0.288 Sum_probs=21.8
Q ss_pred HHHHHHHHHHH-HHHcCCHHHHHhhcCHHH
Q 018467 218 EVQEAIRPVLS-AYMKGDVETLKKYCSPEV 246 (355)
Q Consensus 218 ~ar~~y~pIle-Ay~~GDle~Lk~~cse~~ 246 (355)
.-++.+....+ ||..||++.|..||+++.
T Consensus 28 ~nk~lV~~f~~~a~~~~D~~~~~~~~a~D~ 57 (148)
T 3g0k_A 28 ANHDLVIEMYNKVLIAMDSSAVDRYIAPGY 57 (148)
T ss_dssp HHHHHHHHHHHHTTTTTCGGGGGGTEEEEE
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHhcCcCe
Confidence 34555556555 889999999999988764
No 34
>2chc_A Protein RV3472; hypothetical protein; 1.69A {Mycobacterium tuberculosis} SCOP: d.17.4.25
Probab=38.69 E-value=1.6e+02 Score=23.94 Aligned_cols=26 Identities=12% Similarity=-0.060 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHcCCHHHHHhhcCHH
Q 018467 220 QEAIRPVLSAYMKGDVETLKKYCSPE 245 (355)
Q Consensus 220 r~~y~pIleAy~~GDle~Lk~~cse~ 245 (355)
++.+..-..|+..+|.+.+..+++|+
T Consensus 17 ~~l~~~y~~a~D~~D~~~~~~lf~~D 42 (170)
T 2chc_A 17 QALCARYCLTINTQDGEGWAGCFTED 42 (170)
T ss_dssp HHHHHHHHHHHTTTCHHHHHTTEEEE
T ss_pred HHHHHHHHHHHcCCCHHHHHhcccCc
Confidence 33444456888899999999877655
No 35
>3f40_A Uncharacterized NTF2-like protein; YP_677363.1, NTF2-like protein of unknown function, structural genomics; HET: MSE; 1.27A {Cytophaga hutchinsonii atcc 33406}
Probab=34.98 E-value=13 Score=29.48 Aligned_cols=27 Identities=11% Similarity=0.142 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHcCCHHHHHhhcCHHH
Q 018467 220 QEAIRPVLSAYMKGDVETLKKYCSPEV 246 (355)
Q Consensus 220 r~~y~pIleAy~~GDle~Lk~~cse~~ 246 (355)
++.....++||..||++.|..+|+|++
T Consensus 9 ~~~v~~f~~A~~~gD~~~l~~lla~Dv 35 (114)
T 3f40_A 9 RDLVLEFIHALNTENFPAAKKRLNENF 35 (114)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHTEEEEE
T ss_pred HHHHHHHHHHHHcCCHHHHHHhcCCCe
Confidence 444555788999999999999998865
No 36
>2gex_A SNOL; alpha+beta barrel, oxidoreductase; 2.50A {Streptomyces nogalater} SCOP: d.17.4.9
Probab=29.68 E-value=2.1e+02 Score=22.67 Aligned_cols=27 Identities=19% Similarity=0.262 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHhhcCHH
Q 018467 219 VQEAIRPVLSAYMKGDVETLKKYCSPE 245 (355)
Q Consensus 219 ar~~y~pIleAy~~GDle~Lk~~cse~ 245 (355)
.++.+....+||..||++.|..+|+++
T Consensus 6 ~~~~v~~~~~a~~~~d~~~~~~~~a~D 32 (152)
T 2gex_A 6 NKERCLEMVAAWNRWDVSGVVAHWAPD 32 (152)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHTTEEEE
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHcCCC
Confidence 455566688899999999999888764
No 37
>3us6_A Histidine-containing phosphotransfer protein type MTHPT1; helix bundle, plant hormone signal transduction, cytokinin S transduction; 1.45A {Medicago truncatula}
Probab=27.53 E-value=27 Score=29.60 Aligned_cols=54 Identities=13% Similarity=0.256 Sum_probs=35.9
Q ss_pred cccccChHHHHHHHHHhcC----CCCC---hhhHHHHHHHHHHHHHHHHHcC--CHHHHHhhc
Q 018467 189 TIFQETDAAASIKEIRRRD----PSFS---LPDFVSEVQEAIRPVLSAYMKG--DVETLKKYC 242 (355)
Q Consensus 189 ~lf~ete~a~al~eIk~~D----P~Fd---~~~Fl~~ar~~y~pIleAy~~G--Dle~Lk~~c 242 (355)
++|.+.=....+.+|+.++ |.|- ...|+..+.+.+..|..|...| |.+.|+...
T Consensus 16 ~l~~~g~LD~~f~qL~~L~~~~~~~~~~ell~~Fl~d~~~~l~~L~~al~~~~~D~~~l~~~a 78 (153)
T 3us6_A 16 SMFMEGFLDGQFLQLQQLQDENNPEFVFEVVSLFFDDSERILKDLSFAVDQQSIDFKKVDAHV 78 (153)
T ss_dssp HHHHTTSCCHHHHHHHHTCBTTBTTHHHHHHHHHHHHHHHHHHHHHHHHTSSSCCHHHHHHHH
T ss_pred hcccccchHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHH
Confidence 3343333334466666553 5553 3678888888888899999998 888876543
No 38
>2owp_A Hypothetical protein BXE_B1374; cystatin-like fold, DUF3225 family protein, structural genom joint center for structural genomics, JCSG; 2.00A {Burkholderia xenovorans} SCOP: d.17.4.18
Probab=25.59 E-value=2.6e+02 Score=22.33 Aligned_cols=36 Identities=25% Similarity=0.296 Sum_probs=29.5
Q ss_pred hhhHHHHHHHHHHHHHHHHHcCCHHHHHhhcCHHHH
Q 018467 212 LPDFVSEVQEAIRPVLSAYMKGDVETLKKYCSPEVI 247 (355)
Q Consensus 212 ~~~Fl~~ar~~y~pIleAy~~GDle~Lk~~cse~~y 247 (355)
.+.=..+..++|...-.|+..+|++.|..++++++.
T Consensus 6 ~~~~~~eI~~~~~~y~~Al~~~D~~~L~~lf~~d~~ 41 (129)
T 2owp_A 6 QPDIVAQVQAAFVEYERALVENDIEAMNALFWHTPE 41 (129)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTCHHHHHHTBCCSTT
T ss_pred cHHHHHHHHHHHHHHHHHHHhCCHHHHHhhccCCCc
Confidence 344556777888888999999999999999888863
No 39
>1ohp_A Steroid delta-isomerase; inhibitor; HET: ESR; 1.53A {Pseudomonas testosteroni} SCOP: d.17.4.3 PDB: 1qjg_A* 8cho_A* 1ohs_A* 1ocv_A 1isk_A 3nuv_A* 1ogz_A* 3nhx_A* 3m8c_A* 3nxj_A* 3myt_A* 3mki_A 3mhe_A 1buq_A* 3nbr_A* 3t8u_A 3ov4_A* 3nm2_A
Probab=25.26 E-value=33 Score=25.63 Aligned_cols=29 Identities=10% Similarity=0.291 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHhhcCHHH
Q 018467 218 EVQEAIRPVLSAYMKGDVETLKKYCSPEV 246 (355)
Q Consensus 218 ~ar~~y~pIleAy~~GDle~Lk~~cse~~ 246 (355)
..++.+....+||.+||++.|..+++|++
T Consensus 6 ~~~~~v~~~~~a~~~~D~~~~~~l~a~D~ 34 (125)
T 1ohp_A 6 HMTAVVQRYVAALNAGDLDGIVALFADDA 34 (125)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHTTEEEEE
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHcCCCe
Confidence 34555666788999999999998888763
No 40
>3fgy_A Uncharacterized NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.59A {Burkholderia xenovorans LB400} SCOP: d.17.4.0
Probab=24.91 E-value=34 Score=26.64 Aligned_cols=28 Identities=14% Similarity=0.281 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHhhcCHHH
Q 018467 219 VQEAIRPVLSAYMKGDVETLKKYCSPEV 246 (355)
Q Consensus 219 ar~~y~pIleAy~~GDle~Lk~~cse~~ 246 (355)
.++.+....+||.+||++.|..+++|++
T Consensus 7 ~~~~v~~~~~a~~~~d~~~~~~l~a~D~ 34 (135)
T 3fgy_A 7 NVQIVKDFFAAMGRGDKKGLLAVSAEDI 34 (135)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHTEEEEE
T ss_pred HHHHHHHHHHHHHcCCHHHHHHhcCCCe
Confidence 4556666888999999999999887764
No 41
>3ec9_A Uncharacterized NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.60A {Burkholderia thailandensis E264} SCOP: d.17.4.10
Probab=23.97 E-value=23 Score=27.99 Aligned_cols=27 Identities=11% Similarity=0.141 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHcCCHHHHHhhcCHHH
Q 018467 220 QEAIRPVLSAYMKGDVETLKKYCSPEV 246 (355)
Q Consensus 220 r~~y~pIleAy~~GDle~Lk~~cse~~ 246 (355)
++.+....+||.+||++.|..+|++++
T Consensus 15 ~~~v~~~~~a~~~gD~~~~~~l~a~D~ 41 (140)
T 3ec9_A 15 YQIVADHYAASDRHDPAAMMADIAPAI 41 (140)
T ss_dssp HHHHHHHHHHHHTTCHHHHHTTEEEEE
T ss_pred HHHHHHHHHHHhCCCHHHHHHhcCCCe
Confidence 455666778999999999999887764
No 42
>2rfr_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.16A {Novosphingobium aromaticivorans} SCOP: d.17.4.28
Probab=23.57 E-value=2.7e+02 Score=21.85 Aligned_cols=28 Identities=25% Similarity=0.273 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHhhcCHH
Q 018467 218 EVQEAIRPVLSAYMKGDVETLKKYCSPE 245 (355)
Q Consensus 218 ~ar~~y~pIleAy~~GDle~Lk~~cse~ 245 (355)
..++.+..-..|+..||.+.+..+++|+
T Consensus 20 ~I~~l~~~y~~a~D~~d~~~~~~lf~~D 47 (155)
T 2rfr_A 20 EIRELIARYGPLADSGDAEALSELWVED 47 (155)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHTTEEEE
T ss_pred HHHHHHHHHHHHhcCCCHHHHHhhcCCc
Confidence 3444455566788899999999877664
No 43
>3f9s_A Putative polyketide cyclase; structural genomics, joint center for structural genomics, J protein structure initiative; 1.76A {Acidithiobacillus ferrooxidans atcc 23}
Probab=23.27 E-value=1.3e+02 Score=23.76 Aligned_cols=28 Identities=21% Similarity=0.504 Sum_probs=20.6
Q ss_pred HHHHHHHH-HHHHcCCHHHHHhhcCHHHH
Q 018467 220 QEAIRPVL-SAYMKGDVETLKKYCSPEVI 247 (355)
Q Consensus 220 r~~y~pIl-eAy~~GDle~Lk~~cse~~y 247 (355)
++.+.... ++|..||++.|..+|++++.
T Consensus 9 ~~~v~~~~~~~~~~~d~~~~~~~~a~d~~ 37 (146)
T 3f9s_A 9 KEILTQFTREVWSEGNIEASDKYIAPKYT 37 (146)
T ss_dssp HHHHHHHHHHHTTTCCGGGHHHHEEEEEE
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHcCCCee
Confidence 44445555 48899999999988887654
No 44
>1nww_A Limonene-1,2-epoxide hydrolase; HET: MES; 1.20A {Rhodococcus erythropolis} SCOP: d.17.4.8 PDB: 1nu3_A*
Probab=22.96 E-value=37 Score=26.96 Aligned_cols=27 Identities=15% Similarity=0.329 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHcCCHHHHHhhcCHHH
Q 018467 220 QEAIRPVLSAYMKGDVETLKKYCSPEV 246 (355)
Q Consensus 220 r~~y~pIleAy~~GDle~Lk~~cse~~ 246 (355)
++.+...++||.+||++.|..++++++
T Consensus 25 ~~~v~~~~~a~~~~D~~~l~~l~a~D~ 51 (149)
T 1nww_A 25 EKIVLEFMDALTSNDAAKLIEYFAEDT 51 (149)
T ss_dssp HHHHHHHHHHGGGCCHHHHHTTBCSSC
T ss_pred HHHHHHHHHHHhcCCHHHHHHHhCCCE
Confidence 445555788999999999999988764
No 45
>1oh0_A Steroid delta-isomerase; ketosteroid isomerase, KSI, equilenin, PI, LBHB; HET: EQU; 1.1A {Pseudomonas putida} SCOP: d.17.4.3 PDB: 1e3v_A* 1opy_A 1dmq_A 1dmm_A 1ea2_A 3cpo_A 1e3r_A* 1ogx_A 2inx_A 2pzv_A 1c7h_A 1dmn_A 1k41_A 1oho_A* 3fzw_A* 1cqs_A* 1w00_A 1e97_A 1w6y_A* 3ipt_A* ...
Probab=22.85 E-value=39 Score=25.91 Aligned_cols=29 Identities=21% Similarity=0.315 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHhhcCHHH
Q 018467 218 EVQEAIRPVLSAYMKGDVETLKKYCSPEV 246 (355)
Q Consensus 218 ~ar~~y~pIleAy~~GDle~Lk~~cse~~ 246 (355)
..++.+....+||..||.+.|..++++++
T Consensus 8 ~~~~~v~~~~~a~~~~D~~~l~~l~a~D~ 36 (131)
T 1oh0_A 8 EVQGLMARYIELVDVGDIEAIVQMYADDA 36 (131)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHEEEEE
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHcCCCE
Confidence 34555666789999999999998887763
No 46
>3i0y_A Putative polyketide cyclase; cystatin-like fold, structural genomics, joint center for ST genomics, JCSG, protein structure initiative; HET: MSE UNL; 1.50A {Xanthomonas campestris PV}
Probab=22.52 E-value=35 Score=26.65 Aligned_cols=28 Identities=14% Similarity=0.391 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHhhcCHHH
Q 018467 219 VQEAIRPVLSAYMKGDVETLKKYCSPEV 246 (355)
Q Consensus 219 ar~~y~pIleAy~~GDle~Lk~~cse~~ 246 (355)
.++.+....+||.+||++.|..++++++
T Consensus 10 ~~~~v~~~~~a~~~~D~~~~~~l~a~D~ 37 (140)
T 3i0y_A 10 ATGLVQAYYEAFNRGDWDAMLAFLAEDV 37 (140)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHTEEEEE
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHcCCcE
Confidence 3455666779999999999999888775
No 47
>3h3h_A Uncharacterized snoal-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE UNL MES; 1.60A {Burkholderia thailandensis E264}
Probab=22.50 E-value=32 Score=26.74 Aligned_cols=28 Identities=14% Similarity=0.138 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHhhcCHH
Q 018467 218 EVQEAIRPVLSAYMKGDVETLKKYCSPE 245 (355)
Q Consensus 218 ~ar~~y~pIleAy~~GDle~Lk~~cse~ 245 (355)
.++..+...++||.++|++.|..+++++
T Consensus 9 ~~~~~~~~~~~a~n~~D~~~l~~l~a~D 36 (122)
T 3h3h_A 9 FAQQFSREWIDAWNAHDLDAILSHYADG 36 (122)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHTTEEEE
T ss_pred HHHHHHHHHHHHHhccCHHHHHHhcCCC
Confidence 3455555688999999999999877643
No 48
>3f7x_A Putative polyketide cyclase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL; 1.24A {Pseudomonas putida KT2440}
Probab=22.19 E-value=27 Score=28.63 Aligned_cols=28 Identities=25% Similarity=0.403 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHcCCHHHHHhhcCHHHH
Q 018467 220 QEAIRPVLSAYMKGDVETLKKYCSPEVI 247 (355)
Q Consensus 220 r~~y~pIleAy~~GDle~Lk~~cse~~y 247 (355)
++.+....+||.+||++.|..++++++.
T Consensus 23 ~~lv~~~~~a~~~~D~~~l~~l~a~D~v 50 (151)
T 3f7x_A 23 TELVNAYYAAFNAGDMPAFLALLSEDVI 50 (151)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHTEEEEEE
T ss_pred HHHHHHHHHHHHcCCHHHHHHhcCCCEE
Confidence 4445556789999999999988877653
No 49
>3en8_A Uncharacterized NTF-2 like protein; YP_553245.1, NTF-2 like protein of unknown function, structu genomics; HET: MSE PG4; 1.85A {Burkholderia xenovorans LB400} SCOP: d.17.4.20
Probab=21.96 E-value=38 Score=27.09 Aligned_cols=29 Identities=17% Similarity=0.306 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHhhcCHHH
Q 018467 218 EVQEAIRPVLSAYMKGDVETLKKYCSPEV 246 (355)
Q Consensus 218 ~ar~~y~pIleAy~~GDle~Lk~~cse~~ 246 (355)
..++.+...++||.+||.+.|..++++++
T Consensus 6 ~~~~~v~~~~~a~~~~D~~~l~~llaeD~ 34 (128)
T 3en8_A 6 KIREALNAHWQASAAGDFDAEHDIYDDDA 34 (128)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHTTTEEEEE
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHhcCCCE
Confidence 34556666889999999999999887654
No 50
>1yvi_A Histidine-containing phosphotransfer protein; structural genomics, protein structure initiative, PSI, CESG, AK104879, phosphorelay mediator, HP1; 2.00A {Oryza sativa} SCOP: a.24.10.2 PDB: 2q4f_A 1wn0_A
Probab=21.95 E-value=41 Score=28.04 Aligned_cols=62 Identities=8% Similarity=0.256 Sum_probs=38.2
Q ss_pred HHHHHhc----C-CCCC---hhhHHHHHHHHHHHHHHHHHcC--CHHHHHhhc----------CHHHHHHHHHHHHHHHh
Q 018467 200 IKEIRRR----D-PSFS---LPDFVSEVQEAIRPVLSAYMKG--DVETLKKYC----------SPEVIERCKAEHTAYQS 259 (355)
Q Consensus 200 l~eIk~~----D-P~Fd---~~~Fl~~ar~~y~pIleAy~~G--Dle~Lk~~c----------se~~y~~~~a~I~~r~~ 259 (355)
+.+++.+ + |+|- ...|+..+...+..|..|...| |.+.|+... +-.-...++..+.....
T Consensus 27 ~~~L~~L~~~~~~~~~~~elv~~Fl~d~~~~l~~L~~Al~~~~~D~~~l~~~aH~LKGssa~lGa~~l~~~c~~lE~~~~ 106 (149)
T 1yvi_A 27 FQQLQMLQDEGGTPGFVSEVVTLFCDDADRIINEIATLLEQPVVNFDKVDAYVHQLKGSSASVGAQKVKFTCMQFRQFCQ 106 (149)
T ss_dssp HHHHHHHHC---CTTHHHHHHHHHHHHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHhHHHHHhHHHHHHHHHHHHHHHH
Confidence 4555544 3 6663 3678888888888899999988 786665432 22333344455555555
Q ss_pred CC
Q 018467 260 HG 261 (355)
Q Consensus 260 ~G 261 (355)
.|
T Consensus 107 ~~ 108 (149)
T 1yvi_A 107 DK 108 (149)
T ss_dssp TT
T ss_pred cC
Confidence 44
No 51
>2r25_A Phosphorelay intermediate protein YPD1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: a.24.10.2 PDB: 1c03_A 1oxk_A 1oxb_A 1c02_A 1qsp_A
Probab=21.92 E-value=42 Score=29.35 Aligned_cols=55 Identities=11% Similarity=0.116 Sum_probs=39.2
Q ss_pred CCCC---hhhHHHHHHHHHHHHHHHHH-cCCHHHHHhhcC----------HHHHHHHHHHHHHHHhCCC
Q 018467 208 PSFS---LPDFVSEVQEAIRPVLSAYM-KGDVETLKKYCS----------PEVIERCKAEHTAYQSHGI 262 (355)
Q Consensus 208 P~Fd---~~~Fl~~ar~~y~pIleAy~-~GDle~Lk~~cs----------e~~y~~~~a~I~~r~~~G~ 262 (355)
|+|. ...|+..+...|..|..|+. .+|.+.|+.+++ -.-...++.+++.+...+-
T Consensus 25 p~Fv~elV~~F~edse~~l~~L~~AL~~~~D~~~L~~~aH~LKGSSAnLGA~rV~~~C~~le~~~r~~n 93 (167)
T 2r25_A 25 SDFSKGLIIQFIDQAQTTFAQMQRQLDGEKNLTELDNLGHFLKGSSAALGLQRIAWVCERIQNLGRKME 93 (167)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTCC
T ss_pred chHHHHHHHHHHHhHHHHHHHHHHHHhcccCHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 5673 47889999999999999999 999999986553 2233344455666665554
No 52
>1tuh_A BAL32A, hypothetical protein EGC068; unknown function; 1.85A {Uncultured bacterium} SCOP: d.17.4.11
Probab=21.82 E-value=41 Score=27.22 Aligned_cols=28 Identities=25% Similarity=0.425 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHhhcCHH
Q 018467 218 EVQEAIRPVLSAYMKGDVETLKKYCSPE 245 (355)
Q Consensus 218 ~ar~~y~pIleAy~~GDle~Lk~~cse~ 245 (355)
..++.+....+||.+||++.|..+++|+
T Consensus 30 ~~~~~v~~~~~a~~~gD~~~l~~l~a~D 57 (156)
T 1tuh_A 30 QNAETVRRGYAAFNSGDMKTLTELFDEN 57 (156)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHEEEE
T ss_pred hHHHHHHHHHHHHhCCCHHHHHHhcCCC
Confidence 3455666688899999999999887764
No 53
>3ebt_A Uncharacterized NTF2-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; 1.30A {Burkholderia pseudomallei K96243} SCOP: d.17.4.9
Probab=21.10 E-value=38 Score=26.15 Aligned_cols=28 Identities=18% Similarity=0.344 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHhhcCHHH
Q 018467 219 VQEAIRPVLSAYMKGDVETLKKYCSPEV 246 (355)
Q Consensus 219 ar~~y~pIleAy~~GDle~Lk~~cse~~ 246 (355)
.++.+....+||.+||++.|..+++|++
T Consensus 5 ~~~~v~~~~~a~~~~d~~~~~~l~a~D~ 32 (132)
T 3ebt_A 5 NMQTVRESYEAFHRRDLPGVLAALAPDV 32 (132)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHTTEEEEE
T ss_pred HHHHHHHHHHHHhccCHHHHHHhcCCCE
Confidence 3455666888999999999999998874
No 54
>1fc3_A SPO0A; response regulator, signaling protein; 2.00A {Geobacillus stearothermophilus} SCOP: a.4.6.3 PDB: 1lq1_A
Probab=20.82 E-value=42 Score=27.78 Aligned_cols=30 Identities=30% Similarity=0.486 Sum_probs=23.8
Q ss_pred HHHHHHHHH-HHHHHHcCCHHHHHhhcCHHH
Q 018467 217 SEVQEAIRP-VLSAYMKGDVETLKKYCSPEV 246 (355)
Q Consensus 217 ~~ar~~y~p-IleAy~~GDle~Lk~~cse~~ 246 (355)
..++.++.. |-.||.+||.+.|..+++-.+
T Consensus 63 s~VEraIR~aIe~aw~~g~~~~l~~ifg~t~ 93 (120)
T 1fc3_A 63 SRVERAIRHAIEVAWSRGNLESISSLFGYTV 93 (120)
T ss_dssp HHHHHHHHHHHHHHHHSSCTTTTHHHHCHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHCCCc
Confidence 345667776 889999999999999986544
No 55
>3dm8_A Uncharacterized protein RPA4348; siras, putative isomerase, structural genomics, PSI-2, prote structure initiative; HET: CE9; 1.80A {Rhodopseudomonas palustris} SCOP: d.17.4.20
Probab=20.09 E-value=24 Score=28.51 Aligned_cols=27 Identities=15% Similarity=0.102 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHcCCHHHHHhhcCHHH
Q 018467 220 QEAIRPVLSAYMKGDVETLKKYCSPEV 246 (355)
Q Consensus 220 r~~y~pIleAy~~GDle~Lk~~cse~~ 246 (355)
++.+....+||.+||++.|..+|++++
T Consensus 7 ~~~v~~~~~a~~~gD~~~l~~l~a~Dv 33 (143)
T 3dm8_A 7 WRFSRALHRALNDRQTEELATIIDDNI 33 (143)
T ss_dssp HHHHHHHHHHHHHCCCHHHHHHEEEEE
T ss_pred HHHHHHHHHHHHCCCHHHHHHhcCCCe
Confidence 344455778999999999999887664
Done!