BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 018468
         (355 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|1SEZ|A Chain A, Crystal Structure Of Protoporphyrinogen Ix Oxidase
 pdb|1SEZ|B Chain B, Crystal Structure Of Protoporphyrinogen Ix Oxidase
          Length = 504

 Score =  449 bits (1156), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 229/367 (62%), Positives = 269/367 (73%), Gaps = 23/367 (6%)

Query: 2   VFEADERAGGKLRSISKDGLIWDEGANTMTESEMEVKGLLDDLGIREKQQFPISQYKRYV 61
           VFEA+ +AGGKLRS+S+DGLIWDEGANT TESE +V  L+D LG+REKQQFP+SQ KRY+
Sbjct: 41  VFEAEGKAGGKLRSVSQDGLIWDEGANTXTESEGDVTFLIDSLGLREKQQFPLSQNKRYI 100

Query: 62  VRNGVPFLIPTNPIALLTSNFLSAQSKFQIILEPFLWKKSDSAKVSAEDAKESVGGFFQR 121
            RNG P L+P+NPI L+ SNFLS  SK Q +LEP LWK    ++VS  D+ ESV GFFQR
Sbjct: 101 ARNGTPVLLPSNPIDLIKSNFLSTGSKLQXLLEPILWKNKKLSQVS--DSHESVSGFFQR 158

Query: 122 HFGREVVDFLIDPFVAGTSAGDPESLVMRHSFPELWNLEKRYGSVIAGAIXXXXXXXXXX 181
           HFG+EVVD+LIDPFVAGT  GDP+SL   HSFPELWNLEKR+GSVI GAI          
Sbjct: 159 HFGKEVVDYLIDPFVAGTCGGDPDSLSXHHSFPELWNLEKRFGSVILGAIRSKLSPKNEK 218

Query: 182 XXXXXXXXXXXRRQRGSFSFLGGMQ--------------------VLSLSYSHDGRSALE 221
                      +RQRGSFSFLGG Q                    VL LS S    SA++
Sbjct: 219 KQGPPKTSANKKRQRGSFSFLGGXQTLTDAICKDLREDELRLNSRVLELSCSCTEDSAID 278

Query: 222 NWSLCSSN-QEKQSLGLSFDAVIMTAPLCNVKEMKITKGGNLFPLDFLPEVIYMPLSVII 280
           +WS+ S++  ++QS   SFDAVI TAPLC+VK  KI K GN F L+F+PEV Y+PLSV+I
Sbjct: 279 SWSIISASPHKRQSEEESFDAVIXTAPLCDVKSXKIAKRGNPFLLNFIPEVDYVPLSVVI 338

Query: 281 TTFKKENVRRPLEGFGVLVPSKEQQNGLKTLGTLFSSMMFPDRVPKDLYLYTTFVGGSRN 340
           TTFK+ENV+ PLEGFGVLVPSKEQQ+GLKTLGTLFSS  FPDR P ++YLYTTFVGGSRN
Sbjct: 339 TTFKRENVKYPLEGFGVLVPSKEQQHGLKTLGTLFSSXXFPDRAPNNVYLYTTFVGGSRN 398

Query: 341 KELAKAS 347
           +ELAKAS
Sbjct: 399 RELAKAS 405


>pdb|2IVD|A Chain A, Structure Of Protoporphyrinogen Oxidase From Myxococcus
           Xanthus With Acifluorfen
 pdb|2IVD|B Chain B, Structure Of Protoporphyrinogen Oxidase From Myxococcus
           Xanthus With Acifluorfen
 pdb|2IVE|A Chain A, Structure Of Protoporphyrinogen Oxidase From Myxococcus
           Xanthus
 pdb|2IVE|B Chain B, Structure Of Protoporphyrinogen Oxidase From Myxococcus
           Xanthus
          Length = 478

 Score =  107 bits (267), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 163/364 (44%), Gaps = 46/364 (12%)

Query: 1   MVFEADERAGGKLRSISKDGLIWDEGANTMTESEMEVKGLLDDLGI--REKQQFPISQYK 58
           ++ E+  R GG + + +  G + ++G N+  + E   + L   L +  R +   P ++ +
Sbjct: 43  VLLESSARLGGAVGTHALAGYLVEQGPNSFLDREPATRALAAALNLEGRIRAADPAAK-R 101

Query: 59  RYVVRNGVPFLIPTNPIALLTSNFLSAQSKFQIILEPFLWKKSDSAKVSAEDAKESVGGF 118
           RYV   G    +P +P A L S+ L   ++ ++  E F       ++ + E   ES+  F
Sbjct: 102 RYVYTRGRLRSVPASPPAFLASDILPLGARLRVAGELF-------SRRAPEGVDESLAAF 154

Query: 119 FQRHFGREVVDFLIDPFVAGTSAGDPESLVMRHSFPELWNLEKRYGSVIAGAIXXXXXXX 178
            +RH G      L+D    G  AGD E L +  +FP L  +E+ + S+I GAI       
Sbjct: 155 GRRHLGHRATQVLLDAVQTGIYAGDVEQLSVAATFPMLVKMEREHRSLILGAIRAQKAQR 214

Query: 179 XXXXXXXXXXXXXXRRQRGSFS-FLGGMQVL--SLSYS-----HDGRS----ALEN--WS 224
                          +  G+ S F GG+QVL  +L+ S     H G      A E+  W 
Sbjct: 215 QAALPAGTAP-----KLSGALSTFDGGLQVLIDALAASLGDAAHVGARVEGLAREDGGWR 269

Query: 225 LCSSNQEKQSLGLSFDAVIMTAPLCNVKEMKITKGGNLFPLD-----FLPEVIYMPLSVI 279
           L      +++  LS   V++ AP     ++       L PLD      +  + Y P++V+
Sbjct: 270 LIIEEHGRRA-ELSVAQVVLAAPAHATAKL-------LRPLDDALAALVAGIAYAPIAVV 321

Query: 280 ITTFKKENVRRPLEGFGVLVPSKEQQNGLKTLGTLFSSMMFPDRVPKDLYLYTTFVGGSR 339
              F    +  P +GFG LVP++EQ+   + LG + +S  FP R      LY+  VGG+R
Sbjct: 322 HLGFDAGTLPAP-DGFGFLVPAEEQR---RMLGAIHASTTFPFRAEGGRVLYSCMVGGAR 377

Query: 340 NKEL 343
              L
Sbjct: 378 QPGL 381


>pdb|3I6D|A Chain A, Crystal Structure Of Ppo From Bacillus Subtilis With Af
 pdb|3I6D|B Chain B, Crystal Structure Of Ppo From Bacillus Subtilis With Af
          Length = 470

 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 81/364 (22%), Positives = 154/364 (42%), Gaps = 41/364 (11%)

Query: 2   VFEADERAGGKLRSISKDGLIWDEGANTMTESEMEVKGLLDDLGIRE-------KQQFPI 54
           + EA  R GGK++++ KDG I + G ++  E +     L+ DLG+          Q + +
Sbjct: 39  LVEASPRVGGKIQTVKKDGYIIERGPDSFLERKKSAPQLVKDLGLEHLLVNNATGQSYVL 98

Query: 55  SQYKRYVVRNGVPFLIPTNPIALLTSNFLSAQSKFQIILEPFLWKKSDSAKVSAEDAKES 114
                + +  G    IPT     +++   S   K +  ++  L      A  + +D  +S
Sbjct: 99  VNRTLHPMPKGAVMGIPTKIAPFVSTGLFSLSGKARAAMDFIL-----PASKTKDD--QS 151

Query: 115 VGGFFQRHFGREVVDFLIDPFVAGTSAGDPESLVMRHSFPELWNLEKRYGSVIAGAIXXX 174
           +G FF+R  G EVV+ LI+P ++G  AGD + L +  +FP+ +  E+++ S+I G     
Sbjct: 152 LGEFFRRRVGDEVVENLIEPLLSGIYAGDIDKLSLMSTFPQFYQTEQKHRSLILG----- 206

Query: 175 XXXXXXXXXXXXXXXXXXRRQRGSFSFLG-GMQV--------LSLSYSHDGR--SALENW 223
                              +++G F  L  G+Q         L L+  + G   + L + 
Sbjct: 207 ----MKKTRPQGSGQQLTAKKQGQFQTLSTGLQTLVEEIEKQLKLTKVYKGTKVTKLSHS 262

Query: 224 SLCSSNQEKQSLGLSFDAVIMTAPLCNVKEMKITKGGNLFPLDFLPEVIYMPLSVIITTF 283
             C S +    + L  D+VI+TAP      M       L  +  L  +    ++ +   F
Sbjct: 263 GSCYSLELDNGVTLDADSVIVTAPHKAAAGML----SELPAISHLKNMHSTSVANVALGF 318

Query: 284 KKENVRRPLEGFGVLVPSKEQQNGLKTLGTLFSSMMFPDRVPKDLYLYTTFVGGSRNKEL 343
            + +V+   EG G ++    + +        +++  +P   P+   L   +VG + ++ +
Sbjct: 319 PEGSVQMEHEGTGFVI---SRNSDFAITACTWTNKKWPHAAPEGKTLLRAYVGKAGDESI 375

Query: 344 AKAS 347
              S
Sbjct: 376 VDLS 379


>pdb|3NKS|A Chain A, Structure Of Human Protoporphyrinogen Ix Oxidase
          Length = 477

 Score = 65.9 bits (159), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 89/362 (24%), Positives = 144/362 (39%), Gaps = 44/362 (12%)

Query: 1   MVFEADERAGGKLRSI-SKDGLIWDEGANTMTES-EMEVKGLL--DDLGIREKQQFPI-- 54
           ++ E+ ER GG +RS+   +G I++ G   +  +  +  + LL   +LG+ + +  P+  
Sbjct: 31  VLVESSERLGGWIRSVRGPNGAIFELGPRGIRPAGALGARTLLLVSELGL-DSEVLPVRG 89

Query: 55  ---SQYKRYVVRNGVPFLIPTNPIALLTSNFLSAQSKFQIILEPFLWKK-SDSAKVSAED 110
              +   R++   G    +PT          L     F    +P  W    +  K   ++
Sbjct: 90  DHPAAQNRFLYVGGALHALPTG-----LRGLLRPSPPFS---KPLFWAGLRELTKPRGKE 141

Query: 111 AKESVGGFFQRHFGREVVDFLIDPFVAGTSAGDPESLVMRHSFPELWNLEKRYGSVIAGA 170
             E+V  F QR  G EV    +D    G  AG+   L +R  FP L+  E+ + S++ G 
Sbjct: 142 PDETVHSFAQRRLGPEVASLAMDSLCRGVFAGNSRELSIRSCFPSLFQAEQTHRSILLGL 201

Query: 171 IXXXXXXXXXXXXXXXXXXXXXRRQRGSFSFLGGM----QVLSLSYSHDGRSALENWSLC 226
           +                       Q   +S  GG+    Q L    +  G S L    +C
Sbjct: 202 LLGAGRTPQPDSALIRQALAERWSQ---WSLRGGLEMLPQALETHLTSRGVSVLRGQPVC 258

Query: 227 -----SSNQEKQSL---GLSFDAVIMTAPLCNVKEMKITKGGNLFPLDFLPEVIYMPLSV 278
                +  + K SL    L  D VI   P   + E+   +     PL      I   +SV
Sbjct: 259 GLSLQAEGRWKVSLRDSSLEADHVISAIPASVLSELLPAEAA---PLARALSAITA-VSV 314

Query: 279 IITTFKKENVRRPLEGFGVLVPSKEQQNGLKTLGTLFSSMMFP--DRVPKDLYLYTTFVG 336
            +   + +    P++GFG LVPS E       LG ++ S+ FP  D  P  L + T  +G
Sbjct: 315 AVVNLQYQGAHLPVQGFGHLVPSSEDPG---VLGIVYDSVAFPEQDGSPPGLRV-TVMLG 370

Query: 337 GS 338
           GS
Sbjct: 371 GS 372


>pdb|3LOV|A Chain A, Crystal Structure Of Putative Protoporphyrinogen Oxidase
           (Yp_001813199.1) From Exiguobacterium Sp. 255-15 At 2.06
           A Resolution
          Length = 475

 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 82/175 (46%), Gaps = 11/175 (6%)

Query: 2   VFEADERAGGKLRSISKDGLIWDEGANTMTESEMEVKGLLDDLGIREK-------QQFPI 54
           + EA ER GGK+ +  +DG   + G ++    +  +  L++ +G+ EK       Q F +
Sbjct: 34  LLEAGERLGGKVATYREDGFTIERGPDSYVARKHILTDLIEAIGLGEKLVRNNTSQAFIL 93

Query: 55  SQYKRYVVRNGVPFLIPTNPIALLTSNFLSAQSKFQIILEPFLWKKSDSAKVSAEDAKES 114
                + +  G    IPT+      +  L+ + K ++     L   SDS ++  +D    
Sbjct: 94  DTGGLHPIPKGAVXGIPTDLDLFRQTTLLTEEEKQEVA--DLLLHPSDSLRIPEQDI--P 149

Query: 115 VGGFFQRHFGREVVDFLIDPFVAGTSAGDPESLVMRHSFPELWNLEKRYGSVIAG 169
           +G + +   G  +V+ LI+P ++G  AG+ +      ++P+    E++ GS+  G
Sbjct: 150 LGEYLRPRLGDALVEKLIEPLLSGIYAGNIDQXSTFATYPQFVANEQKAGSLFEG 204


>pdb|1UWY|A Chain A, Crystal Structure Of Human Carboxypeptidase M
          Length = 426

 Score = 31.6 bits (70), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 3/55 (5%)

Query: 296 GVLVPSKEQQNGLKTLGTLFSSMMFPDRVPKDLYLYTTFVGGSRNKELAKASTYK 350
           G LV S    NG++  G L+S  + PD    D++ Y      SRN  + K    K
Sbjct: 175 GALVASYPFDNGVQATGALYSRSLTPD---DDVFQYLAHTYASRNPNMKKGDECK 226


>pdb|1JQO|A Chain A, Crystal Structure Of C4-Form Phosphoenolpyruvate
           Carboxylase From Maize
 pdb|1JQO|B Chain B, Crystal Structure Of C4-Form Phosphoenolpyruvate
           Carboxylase From Maize
          Length = 970

 Score = 30.8 bits (68), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 32/145 (22%), Positives = 67/145 (46%), Gaps = 20/145 (13%)

Query: 37  VKGLLDDLGIREKQQFPIS--QYKRYV--VRNGVPFLIP--TNPIALLT----SNFLSAQ 86
           V   L ++GI E+  + +S  ++  ++   R+G P + P  T  + LL     +N    Q
Sbjct: 263 VDTALKNIGINERLPYNVSLIRFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANLYIDQ 322

Query: 87  SKFQIILEPFLWKKSDSAKVSAEDAKESVGGFFQRHFGREVVDFLIDPFVAGTSAGDPES 146
            + +++ E  +W+ +D  +V AE+   S G         +V  + I+ F       +P  
Sbjct: 323 IE-ELMFELSMWRCNDELRVRAEELHSSSGS--------KVTKYYIE-FWKQIPPNEPYR 372

Query: 147 LVMRHSFPELWNLEKRYGSVIAGAI 171
           +++ H   +L+N  +R   ++A  +
Sbjct: 373 VILGHVRDKLYNTRERARHLLASGV 397


>pdb|2YG7|A Chain A, Structure-Based Redesign Of Cofactor Binding In Putrescine
           Oxidase: A394c-A396t-Q431g Triple Mutant
 pdb|2YG7|B Chain B, Structure-Based Redesign Of Cofactor Binding In Putrescine
           Oxidase: A394c-A396t-Q431g Triple Mutant
          Length = 453

 Score = 30.0 bits (66), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 8/78 (10%)

Query: 2   VFEADERAGGKLRSISKDGLIWDEGANTMTESEMEVKGLLDDLGI------REKQQFPIS 55
           V EA +R GG+  + + DG + + G   ++  +  +  LLD+LG+      RE +   IS
Sbjct: 33  VIEARDRVGGRTWTDTIDGAVLEIGGQWVSPDQTALISLLDELGLKTFERYREGESVYIS 92

Query: 56  QYKRYVVRNGVPFLIPTN 73
                    G  F  PTN
Sbjct: 93  SAGERTRYTGDSF--PTN 108


>pdb|2YG5|A Chain A, Structure-Based Redesign Of Cofactor Binding In Putrescine
           Oxidase: A394c Mutant
          Length = 453

 Score = 30.0 bits (66), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 8/78 (10%)

Query: 2   VFEADERAGGKLRSISKDGLIWDEGANTMTESEMEVKGLLDDLGI------REKQQFPIS 55
           V EA +R GG+  + + DG + + G   ++  +  +  LLD+LG+      RE +   IS
Sbjct: 33  VIEARDRVGGRTWTDTIDGAVLEIGGQWVSPDQTALISLLDELGLKTFERYREGESVYIS 92

Query: 56  QYKRYVVRNGVPFLIPTN 73
                    G  F  PTN
Sbjct: 93  SAGERTRYTGDSF--PTN 108


>pdb|2YG6|A Chain A, Structure-Based Redesign Of Cofactor Binding In Putrescine
           Oxidase: P15i-A394c Double Mutant
 pdb|2YG6|B Chain B, Structure-Based Redesign Of Cofactor Binding In Putrescine
           Oxidase: P15i-A394c Double Mutant
          Length = 453

 Score = 30.0 bits (66), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 8/78 (10%)

Query: 2   VFEADERAGGKLRSISKDGLIWDEGANTMTESEMEVKGLLDDLGI------REKQQFPIS 55
           V EA +R GG+  + + DG + + G   ++  +  +  LLD+LG+      RE +   IS
Sbjct: 33  VIEARDRVGGRTWTDTIDGAVLEIGGQWVSPDQTALISLLDELGLKTFERYREGESVYIS 92

Query: 56  QYKRYVVRNGVPFLIPTN 73
                    G  F  PTN
Sbjct: 93  SAGERTRYTGDSF--PTN 108


>pdb|2YG3|A Chain A, Structure-Based Redesign Of Cofactor Binding In Putrescine
           Oxidase: Wild Type Enzyme
 pdb|2YG3|B Chain B, Structure-Based Redesign Of Cofactor Binding In Putrescine
           Oxidase: Wild Type Enzyme
 pdb|2YG4|A Chain A, Structure-Based Redesign Of Cofactor Binding In Putrescine
           Oxidase: Wild Type Bound To Putrescine
 pdb|2YG4|B Chain B, Structure-Based Redesign Of Cofactor Binding In Putrescine
           Oxidase: Wild Type Bound To Putrescine
          Length = 453

 Score = 30.0 bits (66), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 8/78 (10%)

Query: 2   VFEADERAGGKLRSISKDGLIWDEGANTMTESEMEVKGLLDDLGI------REKQQFPIS 55
           V EA +R GG+  + + DG + + G   ++  +  +  LLD+LG+      RE +   IS
Sbjct: 33  VIEARDRVGGRTWTDTIDGAVLEIGGQWVSPDQTALISLLDELGLKTFERYREGESVYIS 92

Query: 56  QYKRYVVRNGVPFLIPTN 73
                    G  F  PTN
Sbjct: 93  SAGERTRYTGDSF--PTN 108


>pdb|3RHA|A Chain A, The Crystal Structure Of Oxidoreductase From
          Arthrobacter Aurescens
 pdb|3RHA|B Chain B, The Crystal Structure Of Oxidoreductase From
          Arthrobacter Aurescens
          Length = 482

 Score = 28.5 bits (62), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 10/69 (14%)

Query: 2  VFEADERAGGKLRSISKDGLIWDEGANTMTESEMEVKGLLDDLGIREKQQFPISQYKRYV 61
          V EA +R GG+  + + DG + + G   ++  +  +  LLD+LG++         Y RY 
Sbjct: 35 VLEARDRVGGRTWTDTIDGAMLEIGGQWVSPDQTVLMELLDELGLK--------MYSRY- 85

Query: 62 VRNGVPFLI 70
           R+G    I
Sbjct: 86 -RDGESVYI 93


>pdb|1V7Y|A Chain A, Crystal Structure Of Tryptophan Synthase Alpha-Subunit
           From Escherichia Coli At Room Temperature
 pdb|1V7Y|B Chain B, Crystal Structure Of Tryptophan Synthase Alpha-Subunit
           From Escherichia Coli At Room Temperature
 pdb|1WQ5|A Chain A, Crystal Structure Of Tryptophan Synthase Alpha-Subunit
           From Escherichia Coli
 pdb|1WQ5|B Chain B, Crystal Structure Of Tryptophan Synthase Alpha-Subunit
           From Escherichia Coli
          Length = 268

 Score = 28.5 bits (62), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 10/29 (34%), Positives = 18/29 (62%)

Query: 274 MPLSVIITTFKKENVRRPLEGFGVLVPSK 302
           +PL+ ++   K+ N   PL+GFG+  P +
Sbjct: 191 LPLNHLVAKLKEYNAAPPLQGFGISAPDQ 219


>pdb|1XC4|A Chain A, Crystal Structure Of Wild-Type Tryptophan Synthase
           Alpha-Subunits From Escherichia Coli
 pdb|1XC4|B Chain B, Crystal Structure Of Wild-Type Tryptophan Synthase
           Alpha-Subunits From Escherichia Coli
          Length = 268

 Score = 28.5 bits (62), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 10/29 (34%), Positives = 18/29 (62%)

Query: 274 MPLSVIITTFKKENVRRPLEGFGVLVPSK 302
           +PL+ ++   K+ N   PL+GFG+  P +
Sbjct: 191 LPLNHLVAKLKEYNAAPPLQGFGISAPDQ 219


>pdb|1XCF|A Chain A, Crystal Structure Of P28lY173F TRYPTOPHAN SYNTHASE ALPHA-
           Subunits From Escherichia Coli
 pdb|1XCF|B Chain B, Crystal Structure Of P28lY173F TRYPTOPHAN SYNTHASE ALPHA-
           Subunits From Escherichia Coli
          Length = 268

 Score = 28.1 bits (61), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 10/29 (34%), Positives = 18/29 (62%)

Query: 274 MPLSVIITTFKKENVRRPLEGFGVLVPSK 302
           +PL+ ++   K+ N   PL+GFG+  P +
Sbjct: 191 LPLNHLVAKLKEYNAAPPLQGFGISAPDQ 219


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.319    0.136    0.394 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,678,517
Number of Sequences: 62578
Number of extensions: 376500
Number of successful extensions: 1013
Number of sequences better than 100.0: 16
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 991
Number of HSP's gapped (non-prelim): 16
length of query: 355
length of database: 14,973,337
effective HSP length: 100
effective length of query: 255
effective length of database: 8,715,537
effective search space: 2222461935
effective search space used: 2222461935
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)