Your job contains 1 sequence.
>018473
MSKSIAANPSGEDSKAPLINQRTVIITLFVVAAVSCLFLYHTANPFEFLPRSSAYDVIAP
SMKAQKSSNDPSLEKILKRAAMGDNTVIITTLNQAWAEPNSIFDIFLESFRTGNGTGKLL
DHLVVVALDSKALDHCLSTHPHCYALNTSGLDFSGKEAYFMTSSYLEMMWIRIRLLSDVL
AMGYNFVFTDADIVWLQNPFQRFDPDADFQIACDRFSGNSFNLRNEPNGGFNYVKSNNRT
IEFYKFWYNSRKMFPGLHDQDVLNEIKFDPYIQKIQQKLLILDLHLRTGEILWSCLRIRN
HSHDHGLCLKNAERHPFILLTSRLTVFRLLRRRLVLKRAIINDTCFRVSLDFWID
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 018473
(355 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2204508 - symbol:AT1G14590 "AT1G14590" species... 743 1.4e-73 1
TAIR|locus:4515102789 - symbol:AT2G02061 "AT2G02061" spec... 707 8.9e-70 1
TAIR|locus:2156304 - symbol:AT5G44820 "AT5G44820" species... 704 1.8e-69 1
TAIR|locus:2119827 - symbol:AT4G19970 "AT4G19970" species... 698 8.0e-69 1
TAIR|locus:2018783 - symbol:AT1G28710 "AT1G28710" species... 426 5.3e-40 1
TAIR|locus:2018688 - symbol:AT1G28700 "AT1G28700" species... 423 1.1e-39 1
TAIR|locus:1006230710 - symbol:AT1G28695 "AT1G28695" spec... 413 1.3e-38 1
TAIR|locus:2164476 - symbol:AT5G40900 "AT5G40900" species... 367 9.5e-34 1
TAIR|locus:2037273 - symbol:RRA1 "REDUCED RESIDUAL ARABIN... 139 1.2e-06 1
TAIR|locus:2037248 - symbol:RRA2 "REDUCED RESIDUAL ARABIN... 138 1.7e-06 1
TAIR|locus:2016487 - symbol:RRA3 "reduced residual arabin... 127 3.0e-05 1
TAIR|locus:2027605 - symbol:RGXT3 "RhamnoGalacturonan spe... 116 0.00042 1
TAIR|locus:2133457 - symbol:RGXT2 "rhamnogalacturonan xyl... 115 0.00051 1
>TAIR|locus:2204508 [details] [associations]
symbol:AT1G14590 "AT1G14590" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0009543 "chloroplast thylakoid lumen"
evidence=ISS] EMBL:CP002684 CAZy:GT77 InterPro:IPR005069
Pfam:PF03407 EMBL:AC010657 HOGENOM:HOG000238616 IPI:IPI00544712
PIR:E86280 RefSeq:NP_172911.1 UniGene:At.41963
EnsemblPlants:AT1G14590.1 GeneID:838021 KEGG:ath:AT1G14590
TAIR:At1g14590 InParanoid:Q9MA24 OMA:ICEPSRD PhylomeDB:Q9MA24
ProtClustDB:CLSN2682965 Genevestigator:Q9MA24 Uniprot:Q9MA24
Length = 386
Score = 743 (266.6 bits), Expect = 1.4e-73, P = 1.4e-73
Identities = 147/274 (53%), Positives = 184/274 (67%)
Query: 2 SKSIAANP----SGEDSKAPLINQRTVIITLFVVAAVSCLFLYHTANPFEFLPRSSAYDV 57
+ S A NP SGE S P I R + L ++ +SC LY A+ F P +D
Sbjct: 18 ASSSANNPFAEGSGEMSPGPSIPLRRAALFLAAIS-ISCFVLYRAADSLSFSP--PIFD- 73
Query: 58 IAPSMKAQKSSNDPSLEKILKRAAMGDNTVIITTLNQAWAEPNSIFDIFLESFRTGNGTG 117
+ + + +P LE +L +AA D TV++TTLN AWA P S+ D+F ESFR G T
Sbjct: 74 ----LSSYLDNEEPKLEDVLSKAATRDRTVVLTTLNAAWAAPGSVIDLFFESFRIGEETS 129
Query: 118 KLLDHLVVVALDSKALDHCLSTHPHCYALNTSGLDFSGKEAYFMTSSYLEMMWIRIRLLS 177
++LDHLV+VALD+KA CL H HC++L T G+DFS +EAYFMT SYL+MMW RI LL
Sbjct: 130 QILDHLVIVALDAKAYSRCLELHKHCFSLVTEGVDFS-REAYFMTRSYLKMMWRRIDLLR 188
Query: 178 DVLAMGYNFVFTDADIVWLQNPFQRFDPDADFQIACDRFSGNSFNLRNEPNGGFNYVKSN 237
VL MGYNFVFTDAD++W +NPF RF ADFQIACD + G S +L N PNGGFN+V+SN
Sbjct: 189 SVLEMGYNFVFTDADVMWFRNPFPRFYMYADFQIACDHYLGRSNDLHNRPNGGFNFVRSN 248
Query: 238 NRTIEFYKFWYNSRKMFPGLHDQDVLNEIKFDPY 271
NRTI FYK+WY SR FPG HDQDVLN +K +P+
Sbjct: 249 NRTILFYKYWYASRLRFPGYHDQDVLNFLKAEPF 282
>TAIR|locus:4515102789 [details] [associations]
symbol:AT2G02061 "AT2G02061" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002685 GO:GO:0016740 InterPro:IPR005069
Pfam:PF03407 IPI:IPI00895646 RefSeq:NP_001118253.1 UniGene:At.74378
EnsemblPlants:AT2G02061.1 GeneID:6240321 KEGG:ath:AT2G02061
OMA:VKSNERS ArrayExpress:F4IQ97 Uniprot:F4IQ97
Length = 408
Score = 707 (253.9 bits), Expect = 8.9e-70, P = 8.9e-70
Identities = 139/263 (52%), Positives = 172/263 (65%)
Query: 22 RTVIITLFVVAAVSCLFLYHTANPFEFLPRSSA-YDVIAPSMKAQKSSNDPS-------- 72
R V++ F+ C LY T+ + SS+ I PS+ SS PS
Sbjct: 47 RAVLLLFFICF---CFSLYRTSGYLRIVSDSSSTLSRIFPSVNDSSSSPSPSPSLSPEEI 103
Query: 73 ----LEKILKRAAMGDNTVIITTLNQAWAEPNSIFDIFLESFRTGNGTGKLLDHLVVVAL 128
LE++L+RAA D TVI+TTLN+AWA P S+ D+F ESFR G GT +LL HLV++AL
Sbjct: 104 EEPKLEEVLRRAATKDGTVILTTLNEAWAAPGSVIDLFFESFRIGKGTRRLLKHLVIIAL 163
Query: 129 DSKALDHCLSTHPHCYALNTSGLDFSGKEAYFMTSSYLEMMWIRIRLLSDVLAMGYNFVF 188
D+KA C H HC+ L T G+DFSG EAYFMT SYL MMW RI L VL GYNFVF
Sbjct: 164 DAKAYSRCQELHKHCFRLETEGVDFSGGEAYFMTPSYLTMMWRRISFLRSVLEKGYNFVF 223
Query: 189 TDADIVWLQNPFQRFDPDADFQIACDRFSGNSFNLRNEPNGGFNYVKSNNRTIEFYKFWY 248
TDAD++W +NPF+RF D DFQIACD + G + RN PNGGF +V++NNR+I FYKFWY
Sbjct: 224 TDADVMWFRNPFRRFYEDGDFQIACDHYIGRPNDFRNRPNGGFTFVRANNRSIGFYKFWY 283
Query: 249 NSRKMFPGLHDQDVLNEIKFDPY 271
+SR +P HDQDVLN IK DP+
Sbjct: 284 DSRTKYPKNHDQDVLNFIKTDPF 306
>TAIR|locus:2156304 [details] [associations]
symbol:AT5G44820 "AT5G44820" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM] EMBL:CP002688 GO:GO:0016740 InterPro:IPR005069
Pfam:PF03407 HOGENOM:HOG000238616 EMBL:BT026026 IPI:IPI00527813
RefSeq:NP_199295.2 UniGene:At.30051 STRING:Q147R7 PRIDE:Q147R7
DNASU:834512 EnsemblPlants:AT5G44820.1 GeneID:834512
KEGG:ath:AT5G44820 TAIR:At5g44820 InParanoid:Q147R7 OMA:WYAARER
PhylomeDB:Q147R7 Genevestigator:Q147R7 Uniprot:Q147R7
Length = 367
Score = 704 (252.9 bits), Expect = 1.8e-69, P = 1.8e-69
Identities = 141/260 (54%), Positives = 181/260 (69%)
Query: 23 TVIITLFVVAAVSCLFLYHTANPFEFLPRSSAYDVIA------PSMKAQKSSND---PSL 73
T I+ LF+ SCL LY TA P + L S+ + A P++ + + S + P L
Sbjct: 31 TRILILFLGLTASCLVLYKTAYPLQRLNVSNLTSLQASPSPLLPNLNSSEISPETTKPKL 90
Query: 74 --EKILKRAAMGDNTVIITTLNQAWAEPNSIFDIFLESFRTGNGTGKLLDHLVVVALDSK 131
++IL+ A+ +NTVIITTLNQAWAEPNS+FD+FLESFR G GT +LL H+VVV LD K
Sbjct: 91 SFKEILENASTKNNTVIITTLNQAWAEPNSLFDLFLESFRIGQGTQQLLKHVVVVCLDIK 150
Query: 132 ALDHCLSTHPHCYALNTSGLDFSGKEAYFMTSSYLEMMWIRIRLLSDVLAMGYNFVFTDA 191
A + C H +CY + TS DFSG++ Y T YL+MMW RI LL+ VL MG+NF+FTDA
Sbjct: 151 AFERCSQLHTNCYHIETSETDFSGEKVY-NTPDYLKMMWARIDLLTQVLEMGFNFIFTDA 209
Query: 192 DIVWLQNPFQRFDPDADFQIACDRFSGNSFNLRNEPNGGFNYVKSNNRTIEFYKFWYNSR 251
DI+WL++PF R PD DFQ+ACDRF GN ++ N NGGF YV+SNNR+IEFYKFW+ SR
Sbjct: 210 DIMWLRDPFPRLYPDGDFQMACDRFFGNPYDSDNWVNGGFTYVRSNNRSIEFYKFWHKSR 269
Query: 252 KMFPGLHDQDVLNEIKFDPY 271
+P LHDQDV N IK +P+
Sbjct: 270 LDYPDLHDQDVFNRIKHEPF 289
>TAIR|locus:2119827 [details] [associations]
symbol:AT4G19970 "AT4G19970" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL021637
EMBL:AL161552 CAZy:GT77 InterPro:IPR005069 Pfam:PF03407
IPI:IPI00541656 PIR:T04881 RefSeq:NP_193730.1 UniGene:At.50356
PaxDb:O49424 EnsemblPlants:AT4G19970.1 GeneID:827741
KEGG:ath:AT4G19970 TAIR:At4g19970 eggNOG:NOG312116
HOGENOM:HOG000114721 OMA:DFQITCD PhylomeDB:O49424
ArrayExpress:O49424 Genevestigator:O49424 Uniprot:O49424
Length = 715
Score = 698 (250.8 bits), Expect = 8.0e-69, P = 8.0e-69
Identities = 140/257 (54%), Positives = 174/257 (67%)
Query: 19 INQRTVI-ITLFVVAAVSCLFLYHTANPFEFLPRSSAYDVIAPSMKAQKSSNDP------ 71
I Q+ V I + V+ +CL LY TA P ++ + + SS+ P
Sbjct: 382 IGQKEVKKILVLVLGLAACLLLYKTAYPLH--QELDVNNLSSRPLLDHTSSSSPLTRSKS 439
Query: 72 -SLEKILKRAAMGDNTVIITTLNQAWAEPNSIFDIFLESFRTGNGTGKLLDHLVVVALDS 130
S ++L+ A+ + TVI+TTLNQAWAEPNS+FD+FLESFR G GT KLL H+VVV LDS
Sbjct: 440 ISFREVLENASTENRTVIVTTLNQAWAEPNSLFDLFLESFRIGQGTKKLLQHVVVVCLDS 499
Query: 131 KALDHCLSTHPHCYALNTSGLDFSGKEAYFMTSSYLEMMWIRIRLLSDVLAMGYNFVFTD 190
KA C HP+CY L T+G DFSG E F T YL+MMW RI LL+ VL MGYNF+FTD
Sbjct: 500 KAFARCSQLHPNCYYLKTTGTDFSG-EKLFATPDYLKMMWRRIELLTQVLEMGYNFIFTD 558
Query: 191 ADIVWLQNPFQRFDPDADFQIACDRFSGNSFNLRNEPNGGFNYVKSNNRTIEFYKFWYNS 250
ADI+WL++PF R PD DFQ+ACDRF G+ + N NGGF YVKSN+R+IEFYKFWYNS
Sbjct: 559 ADIMWLRDPFPRLYPDGDFQMACDRFFGDPHDSDNWVNGGFTYVKSNHRSIEFYKFWYNS 618
Query: 251 RKMFPGLHDQDVLNEIK 267
R +P +HDQDV N+IK
Sbjct: 619 RLDYPKMHDQDVFNQIK 635
Score = 651 (234.2 bits), Expect = 7.6e-64, P = 7.6e-64
Identities = 128/254 (50%), Positives = 163/254 (64%)
Query: 25 IITLFVVAAVSCLFLYHTAN-PFEFLPRSSAYDVIAPSMKAQKSSN-DPS------LEKI 76
I+ L +SCL Y +AN P + D A + + SS +P LE++
Sbjct: 46 IVLLVTTVTLSCLLFYKSANNPLNMVFSPWKTDCYASKLTNESSSKTEPKKEPVSELERV 105
Query: 77 LKRAAMGDNTVIITTLNQAWAEPNSIFDIFLESFRTGNGTGKLLDHLVVVALDSKALDHC 136
L AAM DNTVIIT LNQAWAEPNS FD+F ESF+ G T +LL H++ V LD KA D C
Sbjct: 106 LMNAAMEDNTVIITALNQAWAEPNSTFDVFRESFKVGIETERLLKHVIAVCLDIKAYDQC 165
Query: 137 LSTHPHCYALNTSGLD-FSGKEAYFMTSSYLEMMWIRIRLLSDVLAMGYNFVFTDADIVW 195
L HPHCY +N + D SG FMT YL+++W R+ LL V+ +GYNF+FTDADI+W
Sbjct: 166 LKVHPHCYLINATDSDQLSGPNR-FMTPGYLKLIWRRMDLLRQVIGLGYNFIFTDADILW 224
Query: 196 LQNPFQRFDPDADFQIACDRFSGNSFNLRNEPNGGFNYVKSNNRTIEFYKFWYNSRKMFP 255
L++PF RF PDADFQI CD ++G + +N N GF YVK+NN+T +FYK+W S + FP
Sbjct: 225 LRDPFPRFFPDADFQITCDDYNGRPSDKKNHVNSGFTYVKANNKTSKFYKYWIRSSRKFP 284
Query: 256 GLHDQDVLNEIKFD 269
G HDQDV N IK D
Sbjct: 285 GKHDQDVFNFIKND 298
>TAIR|locus:2018783 [details] [associations]
symbol:AT1G28710 "AT1G28710" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0016740
CAZy:GT77 InterPro:IPR005069 Pfam:PF03407 EMBL:AC007508
eggNOG:NOG264190 HOGENOM:HOG000238616 ProtClustDB:CLSN2688058
EMBL:AY045852 EMBL:AY091379 IPI:IPI00523707 RefSeq:NP_001185108.1
RefSeq:NP_564315.1 UniGene:At.16393 ProteinModelPortal:Q9FXJ4
IntAct:Q9FXJ4 EnsemblPlants:AT1G28710.1 EnsemblPlants:AT1G28710.3
GeneID:839771 KEGG:ath:AT1G28710 TAIR:At1g28710 InParanoid:Q9FXJ4
OMA:AYDRCIF PhylomeDB:Q9FXJ4 ArrayExpress:Q9FXJ4
Genevestigator:Q9FXJ4 Uniprot:Q9FXJ4
Length = 340
Score = 426 (155.0 bits), Expect = 5.3e-40, P = 5.3e-40
Identities = 88/201 (43%), Positives = 126/201 (62%)
Query: 73 LEKILKRAAMGDN-TVIITTLNQAWAEP----NSIFDIFLESFRTGNGTGKLLDHLVVVA 127
LE +L +AAMG+N TVII +N+A+ E ++ D+FLESF G GT LLDHL++VA
Sbjct: 54 LEAVLDKAAMGNNKTVIIAMVNKAYVEEVEGGRTMLDLFLESFWEGEGTRPLLDHLMLVA 113
Query: 128 LDSKALDHCLSTHPHCYALNTSGLDFSGKEAYFMTSSYLEMMWIRIRLLSDVLAMGYNFV 187
D + D CL HCY ++T G+D G++ Y M+ ++EMMW R LL DVL+ GYN
Sbjct: 114 ADQTSYDRCLFRRLHCYKMDTDGVDLEGEKVY-MSKDFIEMMWRRTHLLLDVLSRGYNLT 172
Query: 188 FTDADIVWLQNPFQR--FDPDADFQIACDRFSGNSFNLRNEPNGGFNYVKSNNRTIEFYK 245
FTD D++WL++PF R ++ D QI+ D +L N GF +V+SNN+TI ++
Sbjct: 173 FTDTDVMWLRSPFPRLSYNESLDMQISVDSIGLVGGHLINT---GFYHVRSNNKTISLFQ 229
Query: 246 FWYNSRKMFPGLHDQDVLNEI 266
WY+ R G+ +QDVL +
Sbjct: 230 KWYDMRLKSTGMKEQDVLKSL 250
>TAIR|locus:2018688 [details] [associations]
symbol:AT1G28700 "AT1G28700" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM] EMBL:CP002684 GO:GO:0016740 CAZy:GT77
InterPro:IPR005069 Pfam:PF03407 EMBL:AC007508 HOGENOM:HOG000238616
ProtClustDB:CLSN2688058 EMBL:AY924688 EMBL:DQ132667 IPI:IPI00536455
PIR:A86412 RefSeq:NP_174191.2 UniGene:At.51810
ProteinModelPortal:Q9SHQ2 PRIDE:Q9SHQ2 EnsemblPlants:AT1G28700.1
GeneID:839770 KEGG:ath:AT1G28700 TAIR:At1g28700 InParanoid:Q9SHQ2
PhylomeDB:Q9SHQ2 Genevestigator:Q9SHQ2 Uniprot:Q9SHQ2
Length = 338
Score = 423 (154.0 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 87/200 (43%), Positives = 128/200 (64%)
Query: 73 LEKILKRAAMGDN-TVIITTLNQAWAEPN----SIFDIFLESFRTGNGTGKLLDHLVVVA 127
LE +L +A+ G+N TVII +N+A+ E + ++ D+FLESF G GT LL+HL+VVA
Sbjct: 55 LETVLDKASTGNNKTVIIAMVNKAYVEEDGGGRTMLDLFLESFWEGEGTRPLLNHLMVVA 114
Query: 128 LDSKALDHCLSTHPHCYALNTSGLDFSGKEAYFMTSSYLEMMWIRIRLLSDVLAMGYNFV 187
D A D CL HCY ++T G+D G++ Y M+ ++EMMW R RLL DVL+ GY+ +
Sbjct: 115 ADQTAYDRCLFRRLHCYKMDTEGVDLEGEKVY-MSKDFIEMMWRRTRLLLDVLSRGYHII 173
Query: 188 FTDADIVWLQNPFQRFDPDADFQIACDRFSGNSFNLRNEP-NGGFNYVKSNNRTIEFYKF 246
FTD D++WL++P R + D I+ DR N N+R + N GF + +SNN+TI ++
Sbjct: 174 FTDTDVMWLRSPLSRLNVSLDMHISVDR---N--NVRGQLINTGFYHARSNNKTISLFQK 228
Query: 247 WYNSRKMFPGLHDQDVLNEI 266
WY+ R G+ +QDVL +
Sbjct: 229 WYDMRLKSLGMKEQDVLKNL 248
>TAIR|locus:1006230710 [details] [associations]
symbol:AT1G28695 "AT1G28695" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR CAZy:GT77
InterPro:IPR005069 Pfam:PF03407 EMBL:AC007508 IPI:IPI00547903
RefSeq:NP_973933.1 UniGene:At.51809 ProteinModelPortal:Q3E6Y3
PaxDb:Q3E6Y3 PRIDE:Q3E6Y3 EnsemblPlants:AT1G28695.1 GeneID:2745765
KEGG:ath:AT1G28695 TAIR:At1g28695 eggNOG:NOG264190
HOGENOM:HOG000238616 InParanoid:Q3E6Y3 PhylomeDB:Q3E6Y3
ProtClustDB:CLSN2688058 Genevestigator:Q3E6Y3 Uniprot:Q3E6Y3
Length = 329
Score = 413 (150.4 bits), Expect = 1.3e-38, P = 1.3e-38
Identities = 88/200 (44%), Positives = 123/200 (61%)
Query: 73 LEKILKRAAMGDN-TVIITTLNQAWAEP----NSIFDIFLESFRTGNGTGKLLDHLVVVA 127
LE L AA G+N TVIIT +N+A+ + +++ D+FLESF G GT LLDHL+VVA
Sbjct: 45 LEAALYTAAAGNNKTVIITMVNKAYVKEVGRGSTMLDLFLESFWEGEGTLPLLDHLMVVA 104
Query: 128 LDSKALDHCLSTHPHCYALNTS-GLDFSGKEAYFMTSSYLEMMWIRIRLLSDVLAMGYNF 186
+D A D C HCY + T G+D G E FM+ ++EMMW R RL+ DVL GYN
Sbjct: 105 VDQTAYDRCRFKRLHCYKMETEDGVDLEG-EKVFMSKDFIEMMWRRTRLILDVLRRGYNV 163
Query: 187 VFTDADIVWLQNPFQRFDPDADFQIACDRFSGNSFNLRNEPNGGFNYVKSNNRTIEFYKF 246
+FTD D++WL++P R + D QI+ DR + + N GF +V+SNN+TI ++
Sbjct: 164 IFTDTDVMWLRSPLSRLNMSLDMQISVDRINVGGQLI----NTGFYHVRSNNKTISLFQK 219
Query: 247 WYNSRKMFPGLHDQDVLNEI 266
WY+ R G+ +QDVL +
Sbjct: 220 WYDMRLNSTGMKEQDVLKNL 239
>TAIR|locus:2164476 [details] [associations]
symbol:AT5G40900 "AT5G40900" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
"extracellular region" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002688 GO:GO:0016740
InterPro:IPR005069 Pfam:PF03407 IPI:IPI00546295 RefSeq:NP_198906.2
UniGene:At.55285 EnsemblPlants:AT5G40900.1 GeneID:834091
KEGG:ath:AT5G40900 Uniprot:F4KIT4
Length = 322
Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 82/230 (35%), Positives = 128/230 (55%)
Query: 40 YHTANPFEFLPRSSAYDVIAPSMKAQKSSNDPSLEKILKRAAMGDNTVIITTLNQAWAEP 99
+H+ P+ R + + + P +SS L +LK AA D VIIT +++ WA+P
Sbjct: 32 HHSCAPYMNTIRGTQFSHLQP-----ESSG---LSSLLKEAATEDKIVIITMVDREWAKP 83
Query: 100 NSIFDIFLESFRTGNGTGKLLDHLVVVALDSKALDHCLSTHPHCYALNTSGLDFSGKEAY 159
+SI D+FLES R G T LL+HL+VVALD +AL +CL HPHCY L+ +S K++
Sbjct: 84 DSILDLFLESVRIGERTKHLLNHLIVVALDDQALRYCLRAHPHCY-LHR----YSRKKSE 138
Query: 160 FMTSSYLEMMWIRIRLLSDVLAMGYNFVFTDADIVWLQNPFQRFDPDADFQIACDR--FS 217
+ L W + L+ ++L +GY+ +FT+AD++WL+NP +P +AC
Sbjct: 139 SLKPDGLVTGWNKKSLVKEILELGYHIMFTEADVMWLRNPLMHCNPQNAISVACGNSLID 198
Query: 218 GNSFNLRNEPNGGFNYVKSNNRTIEFYKFWYNSRKMFPGLHDQDVLNEIK 267
+L E GGF Y KSN+ TI+ + R ++P +Q + + +K
Sbjct: 199 HQHDHLTTENTGGFFYAKSNDITIDMFNILNVERVLYPATGNQSLCDIVK 248
>TAIR|locus:2037273 [details] [associations]
symbol:RRA1 "REDUCED RESIDUAL ARABINOSE 1" species:3702
"Arabidopsis thaliana" [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0080147 "root hair cell development"
evidence=IMP] InterPro:IPR003388 GO:GO:0005783 EMBL:CP002684
GO:GO:0016740 CAZy:GT77 InterPro:IPR005069 Pfam:PF03407
EMBL:AC013258 GO:GO:0080147 PANTHER:PTHR10994
ProtClustDB:CLSN2682481 EMBL:BT026432 IPI:IPI00544136 PIR:C96781
RefSeq:NP_177648.1 UniGene:At.34814 ProteinModelPortal:Q9C9Q6
PRIDE:Q9C9Q6 EnsemblPlants:AT1G75120.1 GeneID:843849
KEGG:ath:AT1G75120 TAIR:At1g75120 InParanoid:Q9C9Q6 OMA:FAIISEK
PhylomeDB:Q9C9Q6 Genevestigator:Q9C9Q6 Uniprot:Q9C9Q6
Length = 402
Score = 139 (54.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 53/212 (25%), Positives = 100/212 (47%)
Query: 60 PSMKAQKSSNDPSLEKILKRAAMGDNTVIITTLNQAWAEPNSIFDIFLESFRTGNGTGKL 119
P++ +S+N P L K+L++ A+ +++ N +P + ++ + S + G
Sbjct: 109 PTVAPDESAN-PRLAKLLEKVAVNKEIIVVLANNNV--KP--MLEVQIASVKR---VG-- 158
Query: 120 LDHLVVVALDSKALDHCLSTHPHCYALNT-SGLDFSGKEAYFMTSSYLEMMWIRIRLLSD 178
+ + +VV LD C S Y + + +D GK SS ++ ++ R+L +
Sbjct: 159 IQNYLVVPLDDSLESFCKSNEVAYYKRDPDNAIDVVGKSR---RSS--DVSGLKFRVLRE 213
Query: 179 VLAMGYNFVFTDADIVWLQNPFQRFDPDADFQIACDRFSGNSFNLRNEPNGGFNY-VKSN 237
L +GY + +D DIV+LQNPF D+D + D G+ N N F+ +
Sbjct: 214 FLQLGYGVLLSDVDIVFLQNPFGHLYRDSDVESMSD---GHDNNTAYGFNDVFDDPTMTR 270
Query: 238 NRTIEFYKFW-YNSRKMF--PGLHDQDVLNEI 266
+RT+ + W +NS + P L ++L+ +
Sbjct: 271 SRTVYTNRIWVFNSGFFYLRPTLPSIELLDRV 302
>TAIR|locus:2037248 [details] [associations]
symbol:RRA2 "REDUCED RESIDUAL ARABINOSE 2" species:3702
"Arabidopsis thaliana" [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0080147 "root hair cell development"
evidence=IMP] InterPro:IPR003388 GO:GO:0005783 EMBL:CP002684
GO:GO:0016740 CAZy:GT77 InterPro:IPR005069 Pfam:PF03407
EMBL:AC013258 GO:GO:0080147 PANTHER:PTHR10994 EMBL:AY039531
EMBL:AY102148 IPI:IPI00527154 PIR:B96781 RefSeq:NP_565102.1
UniGene:At.17941 ProteinModelPortal:Q9C9Q5 IntAct:Q9C9Q5
PRIDE:Q9C9Q5 EnsemblPlants:AT1G75110.1 GeneID:843848
KEGG:ath:AT1G75110 TAIR:At1g75110 InParanoid:Q9C9Q5 OMA:SCESSER
PhylomeDB:Q9C9Q5 ProtClustDB:CLSN2682481 Genevestigator:Q9C9Q5
Uniprot:Q9C9Q5
Length = 428
Score = 138 (53.6 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 56/212 (26%), Positives = 97/212 (45%)
Query: 60 PSMKAQKSSNDPSLEKILKRAAMGDNTVIITTLNQAWAEPNSIFDIFLESFRTGNGTGKL 119
P++ +S N P L K+L++ A+ N II L + +P + ++ + S + G
Sbjct: 134 PTVVPDESVN-PRLAKLLEKVAV--NKEIIVVLANSNVKP--MLELQIASVKR---VG-- 183
Query: 120 LDHLVVVALDSKALDHCLSTHPHCYALNTS-GLDFSGKEAYFMTSSYLEMMWIRIRLLSD 178
+ + ++VALD C S Y + +D GK S L + R+L +
Sbjct: 184 IQNYLIVALDDSMESFCESKEVVFYKRDPDKAVDMVGKSGGNHAVSGL-----KFRVLRE 238
Query: 179 VLAMGYNFVFTDADIVWLQNPFQRFDPDADFQIACDRFSGNS---FN-LRNEPNGGFNYV 234
L +GY+ + +D DIV+LQNPF D+D + D N+ FN + +EP+ G+
Sbjct: 239 FLQLGYSVLLSDVDIVFLQNPFSHLHRDSDVESMSDGHDNNTAYGFNDVFDEPSMGWARY 298
Query: 235 KSNNRTIEFYKFWYNSRKMFPGLHDQDVLNEI 266
R F ++ R P + D+L+ +
Sbjct: 299 AHTMRIWVFNSGFFYLRPTIPSI---DLLDRV 327
>TAIR|locus:2016487 [details] [associations]
symbol:RRA3 "reduced residual arabinose 3" species:3702
"Arabidopsis thaliana" [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0080147 "root hair cell development"
evidence=IMP] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0009744 "response to sucrose stimulus" evidence=RCA]
[GO:0009749 "response to glucose stimulus" evidence=RCA]
[GO:0009750 "response to fructose stimulus" evidence=RCA]
[GO:0005768 "endosome" evidence=IDA] [GO:0005802 "trans-Golgi
network" evidence=IDA] InterPro:IPR003388 GO:GO:0005783
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005794 GO:GO:0005768
GO:GO:0016740 GO:GO:0005802 CAZy:GT77 InterPro:IPR005069
Pfam:PF03407 GO:GO:0080147 EMBL:AC025808 PANTHER:PTHR10994
ProtClustDB:CLSN2682481 EMBL:AY088117 EMBL:BT025990 EMBL:AK229032
IPI:IPI00530658 RefSeq:NP_564082.1 UniGene:At.28061
ProteinModelPortal:Q9LN62 STRING:Q9LN62 PaxDb:Q9LN62 PRIDE:Q9LN62
EnsemblPlants:AT1G19360.1 GeneID:838519 KEGG:ath:AT1G19360
TAIR:At1g19360 eggNOG:NOG318198 HOGENOM:HOG000012501
InParanoid:Q9LN62 OMA:EMLEMWF PhylomeDB:Q9LN62
Genevestigator:Q9LN62 Uniprot:Q9LN62
Length = 428
Score = 127 (49.8 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 53/203 (26%), Positives = 90/203 (44%)
Query: 60 PSMKAQKSSNDPSLEKILKRAAMGDNTVIITTLNQAWAEPNSIFDIFLESFRTGNGTGKL 119
P++ +S N P L KIL+ A+ D VI+ N A ++ ++ + S + G
Sbjct: 133 PTILPDESIN-PRLAKILEEIAV-DKEVIVALAN---ANVKAMLEVQIASIKR---VG-- 182
Query: 120 LDHLVVVALDSKALDHCLSTHPHCYALNTS-GLDFSGKEAYFMTSSYLEMMWIRIRLLSD 178
+ + +VVALD + C Y + +D GK T + ++ R+L +
Sbjct: 183 ITNYLVVALDDYIENLCKENDVAYYKRDPDKDVDTVGK-----TGGNHAVSGLKFRVLRE 237
Query: 179 VLAMGYNFVFTDADIVWLQNPFQRFDPDADFQIACDRFSGNS---FN-LRNEPNGGFNYV 234
L +GY + +D DIV+LQNPF D+D + D ++ FN + +EP G+
Sbjct: 238 FLQLGYGVLLSDVDIVFLQNPFSHLYRDSDVESMSDGHDNHTAYGFNDVFDEPAMGWARY 297
Query: 235 KSNNRTIEFYKFWYNSRKMFPGL 257
R F ++ R P +
Sbjct: 298 AHTMRIWVFNSGFFYLRPTIPSI 320
>TAIR|locus:2027605 [details] [associations]
symbol:RGXT3 "RhamnoGalacturonan specific
Xylosyltransferase 3" species:3702 "Arabidopsis thaliana"
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0035252
"UDP-xylosyltransferase activity" evidence=IDA] InterPro:IPR003388
GO:GO:0005783 EMBL:CP002684 GenomeReviews:CT485782_GR CAZy:GT77
InterPro:IPR005069 Pfam:PF03407 GO:GO:0035252 EMBL:AC009323
PANTHER:PTHR10994 EMBL:BT005111 EMBL:AK117396 IPI:IPI00528206
PIR:B96607 RefSeq:NP_176048.1 UniGene:At.42755
ProteinModelPortal:Q9FXA7 PRIDE:Q9FXA7 EnsemblPlants:AT1G56550.1
GeneID:842108 KEGG:ath:AT1G56550 TAIR:At1g56550
HOGENOM:HOG000241399 InParanoid:Q9FXA7 KO:K11714 OMA:NETWVNE
PhylomeDB:Q9FXA7 ProtClustDB:CLSN2682897 Genevestigator:Q9FXA7
Uniprot:Q9FXA7
Length = 383
Score = 116 (45.9 bits), Expect = 0.00042, P = 0.00042
Identities = 54/218 (24%), Positives = 91/218 (41%)
Query: 24 VIITLFVVAAVSCLFLYHTANPFEFLPRSSAYDVIAPSMKAQKSS-NDPSLEKILKRAAM 82
+++ LFV+ V FL T + P +++ ++PS S D SL + +K A
Sbjct: 26 LLLALFVILGV---FLPLTKSSLFMFPNTTSSS-LSPSSSLSVSDWRDYSLAQAVKFVAK 81
Query: 83 GDNTVIITTLNQAWAEPNSIFDIFLESFRTGNGTGKLLDHLVVVALDSKALDHCLSTHPH 142
+ TVI+ ++ + P FL ++ K + ++V+A D L P
Sbjct: 82 NE-TVIVCAVSYPFL-P------FLNNWLISISRQKHQEKVLVIAEDYATLYKVNEKWPG 133
Query: 143 CYALNTSGLDFSGKEAYFMTSSYLEMMWIRIRLLSDVLAMGYNFVFTDADIVWLQNPFQR 202
L LD F + + + R + L ++L +GYN ++ D D+VWLQ+PF
Sbjct: 134 HAVLIPPALDPQSAHK-FGSQGFFNLTSRRPQHLLNILELGYNVMYNDVDMVWLQDPFDY 192
Query: 203 FDPDADFQIACDRFS----GNSFNLRNEPNGGFNYVKS 236
D D + +S +L G YV S
Sbjct: 193 LQGSYDAYFMDDMIAIKPLNHSHDLPPLSRSGVTYVCS 230
>TAIR|locus:2133457 [details] [associations]
symbol:RGXT2 "rhamnogalacturonan xylosyltransferase 2"
species:3702 "Arabidopsis thaliana" [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0010306
"rhamnogalacturonan II biosynthetic process" evidence=IMP]
[GO:0035252 "UDP-xylosyltransferase activity" evidence=IDA]
InterPro:IPR003388 GO:GO:0005783 GO:GO:0005794 EMBL:CP002687
EMBL:AC007138 CAZy:GT77 InterPro:IPR005069 Pfam:PF03407
EMBL:AL161492 GO:GO:0035252 EMBL:AF104919 PANTHER:PTHR10994
GO:GO:0010306 KO:K11714 ProtClustDB:CLSN2682897 EMBL:AY065071
EMBL:BT002558 EMBL:BK005830 IPI:IPI00536959 PIR:T02000
RefSeq:NP_192084.1 UniGene:At.3842 ProteinModelPortal:Q9ZSJ0
IntAct:Q9ZSJ0 EnsemblPlants:AT4G01750.1 GeneID:827905
KEGG:ath:AT4G01750 TAIR:At4g01750 InParanoid:Q9ZSJ0 OMA:PDQNGET
PhylomeDB:Q9ZSJ0 Genevestigator:Q9ZSJ0 Uniprot:Q9ZSJ0
Length = 367
Score = 115 (45.5 bits), Expect = 0.00051, P = 0.00051
Identities = 50/188 (26%), Positives = 80/188 (42%)
Query: 24 VIITLFVVAAVSCLFLYHTANPFEFLPRSSAYDVIAPSMKAQKSSN--DPSLEKILKRAA 81
V++ LF++ V FL +P P + A S+ S + +L + K A
Sbjct: 40 VLLALFLLLGV---FLPWPGSPLLLFPNKVSSPSYASSLSPHAKSEWRNYTLAQAAKFVA 96
Query: 82 MGDNTVIITTLNQAWAEPNSIFDIFLESFRTGNGTGKLLDHLVVVALDSKALDHCLSTHP 141
+ TVI+ ++ S F FL ++ K + ++V+A D L P
Sbjct: 97 T-NGTVIVCAVS-------SPFLPFLNNWLISVSRQKHQEKVLVIAEDYITLYKVNEKWP 148
Query: 142 HCYALNTSGLDFSGKEAY-FMTSSYLEMMWIRIRLLSDVLAMGYNFVFTDADIVWLQNPF 200
L LD K AY F + + R + L +L +GYN ++ D D+VWLQ+PF
Sbjct: 149 GHAVLIPPALD--SKTAYSFGSQGFFNFTARRPQHLLQILELGYNVMYNDVDMVWLQDPF 206
Query: 201 QRFDPDAD 208
Q + D
Sbjct: 207 QYLEGSHD 214
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.324 0.138 0.432 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 355 324 0.00086 116 3 11 22 0.48 33
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 13
No. of states in DFA: 614 (65 KB)
Total size of DFA: 247 KB (2131 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 26.45u 0.15s 26.60t Elapsed: 00:00:01
Total cpu time: 26.45u 0.15s 26.60t Elapsed: 00:00:01
Start: Sat May 11 16:05:43 2013 End: Sat May 11 16:05:44 2013