Query 018473
Match_columns 355
No_of_seqs 182 out of 358
Neff 5.9
Searched_HMMs 46136
Date Fri Mar 29 09:19:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018473.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018473hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF03407 Nucleotid_trans: Nucl 100.0 3.9E-38 8.5E-43 288.3 18.2 188 118-305 1-212 (212)
2 cd02537 GT8_Glycogenin Glycoge 98.1 0.00011 2.4E-09 69.1 14.6 168 92-285 8-179 (240)
3 cd04194 GT8_A4GalT_like A4GalT 97.8 0.00035 7.5E-09 65.4 12.0 182 88-286 3-207 (248)
4 PF05637 Glyco_transf_34: gala 97.8 3.4E-05 7.5E-10 73.1 5.1 156 123-291 25-212 (239)
5 cd00505 Glyco_transf_8 Members 97.5 0.005 1.1E-07 57.8 15.5 113 167-286 81-211 (246)
6 PLN00176 galactinol synthase 97.4 0.0032 6.9E-08 62.7 13.5 171 84-268 21-224 (333)
7 PLN03182 xyloglucan 6-xylosylt 97.2 0.0029 6.3E-08 64.1 11.1 144 133-291 157-327 (429)
8 cd06914 GT8_GNT1 GNT1 is a fun 97.1 0.0028 6E-08 61.6 9.0 106 170-287 81-189 (278)
9 PF01501 Glyco_transf_8: Glyco 96.1 0.01 2.2E-07 54.2 5.7 111 166-286 83-213 (250)
10 PLN03181 glycosyltransferase; 95.8 0.11 2.5E-06 53.0 11.7 142 133-290 158-327 (453)
11 COG1442 RfaJ Lipopolysaccharid 95.7 0.07 1.5E-06 53.1 9.6 174 88-268 5-200 (325)
12 cd06431 GT8_LARGE_C LARGE cata 95.1 0.065 1.4E-06 52.0 7.2 94 175-268 89-206 (280)
13 PRK15171 lipopolysaccharide 1, 94.5 0.53 1.2E-05 46.8 12.2 93 176-268 113-226 (334)
14 PF03314 DUF273: Protein of un 94.4 0.24 5.3E-06 46.4 8.7 95 166-268 25-126 (222)
15 cd06430 GT8_like_2 GT8_like_2 93.3 0.94 2E-05 44.7 11.1 104 176-285 90-225 (304)
16 cd06432 GT8_HUGT1_C_like The C 93.1 0.3 6.4E-06 46.6 7.1 105 174-286 86-217 (248)
17 cd06429 GT8_like_1 GT8_like_1 90.7 0.44 9.5E-06 45.8 5.3 81 185-285 116-208 (257)
18 PLN02659 Probable galacturonos 60.9 19 0.00041 38.3 6.1 104 160-264 321-455 (534)
19 PLN02870 Probable galacturonos 53.9 23 0.00051 37.6 5.4 103 161-264 321-454 (533)
20 PLN02867 Probable galacturonos 50.4 40 0.00088 35.9 6.5 105 159-265 321-457 (535)
21 PF11051 Mannosyl_trans3: Mann 46.6 11 0.00023 36.3 1.5 19 185-203 93-111 (271)
22 PLN02910 polygalacturonate 4-a 43.9 36 0.00077 37.0 4.9 105 158-265 450-580 (657)
23 PLN02523 galacturonosyltransfe 43.5 2.7E+02 0.0058 30.1 11.2 101 160-264 354-481 (559)
24 PLN02718 Probable galacturonos 40.7 34 0.00074 37.0 4.2 93 169-264 405-525 (603)
25 KOG4748 Subunit of Golgi manno 39.9 22 0.00047 36.1 2.5 144 133-290 132-312 (364)
26 cd08579 GDPD_memb_like Glycero 39.6 2.9E+02 0.0064 25.0 12.1 69 68-141 80-148 (220)
27 PLN02742 Probable galacturonos 38.9 83 0.0018 33.6 6.6 101 163-266 333-459 (534)
28 PLN02829 Probable galacturonos 38.9 62 0.0014 35.2 5.8 105 159-267 433-564 (639)
29 COG1512 Beta-propeller domains 38.8 1.7E+02 0.0037 28.6 8.4 62 65-130 43-109 (271)
30 PF02484 Rhabdo_NV: Rhabdoviru 28.8 70 0.0015 26.4 3.3 27 172-198 14-40 (111)
31 COG1136 SalX ABC-type antimicr 26.1 41 0.00089 31.9 1.8 31 309-345 131-162 (226)
32 KOG0058 Peptide exporter, ABC 24.3 43 0.00093 36.9 1.7 34 314-347 589-626 (716)
33 PLN02331 phosphoribosylglycina 22.7 6.2E+02 0.013 23.5 8.9 43 101-147 11-56 (207)
34 PRK05647 purN phosphoribosylgl 22.6 6E+02 0.013 23.3 9.1 54 85-148 3-59 (200)
35 COG4987 CydC ABC-type transpor 21.7 53 0.0012 35.2 1.8 33 313-345 462-494 (573)
No 1
>PF03407 Nucleotid_trans: Nucleotide-diphospho-sugar transferase; InterPro: IPR005069 Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases [].
Probab=100.00 E-value=3.9e-38 Score=288.26 Aligned_cols=188 Identities=28% Similarity=0.523 Sum_probs=162.8
Q ss_pred ccCCcEEEEEeChHHHHHhhhcCCcEEEecCCCCCCCccccccccHHHHHHHHHHHHHHHHHHHcCCcEEEecccEEEcc
Q 018473 118 KLLDHLVVVALDSKALDHCLSTHPHCYALNTSGLDFSGKEAYFMTSSYLEMMWIRIRLLSDVLAMGYNFVFTDADIVWLQ 197 (355)
Q Consensus 118 ~l~~nllVvAlD~~a~~~c~~~g~~C~~~~~~~~d~s~~~~~~gs~~f~~m~w~K~~~l~~vL~lGy~VLfsDvDVVWlR 197 (355)
++++|++|+|+|+++++.|+++|++|+.......+.......||++.|.+++|.|+.+++.+|++||+|+|+|+||||+|
T Consensus 1 ~~~~~~lv~a~D~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~L~~G~~vl~~D~Dvv~~~ 80 (212)
T PF03407_consen 1 HLIDNFLVVALDEETYDALEELGPPCFYFPSDASESEDSAFRFGSKAFQKLTWLKPKVLLDLLELGYDVLFSDADVVWLR 80 (212)
T ss_pred CccccEEEEEECHHHHHHHHhcCCCeEEEecccccccchhhhcCCHHHHHHHHHHHHHHHHHHHcCCceEEecCCEEEec
Confidence 36899999999999999999999999887754223333367899999999999999999999999999999999999999
Q ss_pred Cccccc-CCCCCeEeecCCCCCCC-CCCCCCCCeeEEEEEeChhHHHHHHHHHHHHHcCCCCCchHHHHHHHcCCCCCCC
Q 018473 198 NPFQRF-DPDADFQIACDRFSGNS-FNLRNEPNGGFNYVKSNNRTIEFYKFWYNSRKMFPGLHDQDVLNEIKFDPYIQKI 275 (355)
Q Consensus 198 nP~~~f-~~~aDi~is~D~~~g~~-~d~~~~~NtGf~yvR~T~~T~~f~~~W~~~r~~~p~~~DQ~vfN~ll~~~~~~~~ 275 (355)
||+++| ++++|+++++|...+.+ ...+..+|+||||+|||++|++|++.|.+.....++.+||.+||++++.......
T Consensus 81 dp~~~~~~~~~Di~~~~d~~~~~~~~~~~~~~n~G~~~~r~t~~~~~~~~~w~~~~~~~~~~~DQ~~~n~~l~~~~~~~~ 160 (212)
T PF03407_consen 81 DPLPYFENPDADILFSSDGWDGTNSDRNGNLVNTGFYYFRPTPRTIAFLEDWLERMAESPGCWDQQAFNELLREQAARYG 160 (212)
T ss_pred CcHHhhccCCCceEEecCCCcccchhhcCCccccceEEEecCHHHHHHHHHHHHHHHhCCCcchHHHHHHHHHhcccCCc
Confidence 999999 89999999999887653 3345568999999999999999999999877777788999999999974333338
Q ss_pred ceEEEEecccCc-CCc---c------------------cccccccccchhch
Q 018473 276 QQKLLILDLHLR-TGE---I------------------LWSCLRIRNHSHDH 305 (355)
Q Consensus 276 gl~v~~Ld~~~F-gG~---~------------------aNc~~G~~~Kv~dL 305 (355)
++++++||+.+| +|. + +|||.|.++|+++|
T Consensus 161 ~~~~~~L~~~~f~~g~~~f~~~~~~~~~~~~~~p~~vH~n~~~g~~~K~~~~ 212 (212)
T PF03407_consen 161 GLRVRFLPPSLFPNGHGYFCQSRDWAWVPTKNKPYIVHANCCDGKEGKRQRF 212 (212)
T ss_pred CcEEEEeCHHHeeccccceeecchhhhhccccccceEEEcCCCChHhHHhhC
Confidence 999999999999 221 1 89999999999875
No 2
>cd02537 GT8_Glycogenin Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen. Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases.
Probab=98.07 E-value=0.00011 Score=69.10 Aligned_cols=168 Identities=20% Similarity=0.156 Sum_probs=97.6
Q ss_pred ccccccCCCchHHHHHHHhhhccCCcccCCcEEEEE---eChHHHHHhhhcCCcEEEecCCCCCCCccccccccHHHHHH
Q 018473 92 LNQAWAEPNSIFDIFLESFRTGNGTGKLLDHLVVVA---LDSKALDHCLSTHPHCYALNTSGLDFSGKEAYFMTSSYLEM 168 (355)
Q Consensus 92 ~N~ay~~p~s~lDlfLes~~~g~~t~~l~~nllVvA---lD~~a~~~c~~~g~~C~~~~~~~~d~s~~~~~~gs~~f~~m 168 (355)
+|.+|+.+ .-..+.|++.. .. . . +++|+. +.++..+.+++.+..+...+. .+... ........+...
T Consensus 8 ~~~~Y~~~---a~vl~~SL~~~-~~-~-~-~~~vl~~~~is~~~~~~L~~~~~~~~~v~~--i~~~~-~~~~~~~~~~~~ 77 (240)
T cd02537 8 TNDDYLPG---ALVLGYSLRKV-GS-S-Y-DLVVLVTPGVSEESREALEEVGWIVREVEP--IDPPD-SANLLKRPRFKD 77 (240)
T ss_pred cChhHHHH---HHHHHHHHHhc-CC-C-C-CEEEEECCCCCHHHHHHHHHcCCEEEecCc--cCCcc-hhhhccchHHHH
Confidence 46677521 11245566642 11 1 2 344443 346667788888866655442 12211 111123356677
Q ss_pred HHHHHHHHHHHHHcCC-cEEEecccEEEccCcccccCCCCCeEeecCCCCCCCCCCCCCCCeeEEEEEeChhHHHHHHHH
Q 018473 169 MWIRIRLLSDVLAMGY-NFVFTDADIVWLQNPFQRFDPDADFQIACDRFSGNSFNLRNEPNGGFNYVKSNNRTIEFYKFW 247 (355)
Q Consensus 169 ~w~K~~~l~~vL~lGy-~VLfsDvDVVWlRnP~~~f~~~aDi~is~D~~~g~~~d~~~~~NtGf~yvR~T~~T~~f~~~W 247 (355)
+|.|..+... .+| .||+.|+|++.++|+-+.|..+..+....|.. .....|+||+.++++....+-+.+.
T Consensus 78 ~~~kl~~~~l---~~~drvlylD~D~~v~~~i~~Lf~~~~~~~a~~d~~------~~~~fNsGv~l~~~~~~~~~~~~~~ 148 (240)
T cd02537 78 TYTKLRLWNL---TEYDKVVFLDADTLVLRNIDELFDLPGEFAAAPDCG------WPDLFNSGVFVLKPSEETFNDLLDA 148 (240)
T ss_pred HhHHHHhccc---cccceEEEEeCCeeEccCHHHHhCCCCceeeecccC------ccccccceEEEEcCCHHHHHHHHHH
Confidence 8888776652 256 59999999999999988886522233333321 1356899999999986554444333
Q ss_pred HHHHHcCCCCCchHHHHHHHcCCCCCCCceEEEEeccc
Q 018473 248 YNSRKMFPGLHDQDVLNEIKFDPYIQKIQQKLLILDLH 285 (355)
Q Consensus 248 ~~~r~~~p~~~DQ~vfN~ll~~~~~~~~gl~v~~Ld~~ 285 (355)
..... ....+||+++|.+.+.. | .++.||..
T Consensus 149 ~~~~~-~~~~~DQdiLN~~~~~~-----~-~~~~l~~~ 179 (240)
T cd02537 149 LQDTP-SFDGGDQGLLNSYFSDR-----G-IWKRLPFT 179 (240)
T ss_pred HhccC-CCCCCCHHHHHHHHcCC-----C-CEeECCcc
Confidence 32111 13568999999998521 1 46667655
No 3
>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune sys
Probab=97.76 E-value=0.00035 Score=65.44 Aligned_cols=182 Identities=19% Similarity=0.206 Sum_probs=98.4
Q ss_pred EEEEccccccCCCchHHHHHHHhhhccCCcccCCcEEEEEeC--hHHHHHhhhc----CCcEEEecCCCCCCCccccccc
Q 018473 88 IITTLNQAWAEPNSIFDIFLESFRTGNGTGKLLDHLVVVALD--SKALDHCLST----HPHCYALNTSGLDFSGKEAYFM 161 (355)
Q Consensus 88 IlT~~N~ay~~p~s~lDlfLes~~~g~~t~~l~~nllVvAlD--~~a~~~c~~~----g~~C~~~~~~~~d~s~~~~~~g 161 (355)
|+.++|..|..+ +-..+.|++.. ....--++.|++.| ++..+.+++. +..+-....+..++.. . ...
T Consensus 3 I~~~~d~~y~~~---~~~~l~Sl~~~--~~~~~~~~~il~~~is~~~~~~L~~~~~~~~~~i~~~~i~~~~~~~-~-~~~ 75 (248)
T cd04194 3 IVFAIDDNYAPY---LAVTIKSILAN--NSKRDYDFYILNDDISEENKKKLKELLKKYNSSIEFIKIDNDDFKF-F-PAT 75 (248)
T ss_pred EEEEecHhhHHH---HHHHHHHHHhc--CCCCceEEEEEeCCCCHHHHHHHHHHHHhcCCeEEEEEcCHHHHhc-C-Ccc
Confidence 677789998521 12355666642 22122345566644 5667777665 3222222211111111 0 001
Q ss_pred cHHHHHHHHHHHHHHHHHHHcCCc-EEEecccEEEccCcccccCC---CCCeEeecCCCCCC---------CCCCCCCCC
Q 018473 162 TSSYLEMMWIRIRLLSDVLAMGYN-FVFTDADIVWLQNPFQRFDP---DADFQIACDRFSGN---------SFNLRNEPN 228 (355)
Q Consensus 162 s~~f~~m~w~K~~~l~~vL~lGy~-VLfsDvDVVWlRnP~~~f~~---~aDi~is~D~~~g~---------~~d~~~~~N 228 (355)
+..|..++..|..+ -.++. +|+ ||+.|+|++-++|+-+.+.. +.-+....|..... ........|
T Consensus 76 ~~~~~~~~y~rl~l-~~ll~-~~~rvlylD~D~lv~~di~~L~~~~~~~~~~aa~~d~~~~~~~~~~~~~~~~~~~~yfN 153 (248)
T cd04194 76 TDHISYATYYRLLI-PDLLP-DYDKVLYLDADIIVLGDLSELFDIDLGDNLLAAVRDPFIEQEKKRKRRLGGYDDGSYFN 153 (248)
T ss_pred cccccHHHHHHHHH-HHHhc-ccCEEEEEeCCEEecCCHHHHhcCCcCCCEEEEEecccHHHHHHHHhhcCCCcccceee
Confidence 22344444455544 44555 675 99999999999999888754 23334445543210 011234689
Q ss_pred eeEEEEEeChh-HHHHHHHHHHHHHcC---CCCCchHHHHHHHcCCCCCCCceEEEEecccC
Q 018473 229 GGFNYVKSNNR-TIEFYKFWYNSRKMF---PGLHDQDVLNEIKFDPYIQKIQQKLLILDLHL 286 (355)
Q Consensus 229 tGf~yvR~T~~-T~~f~~~W~~~r~~~---p~~~DQ~vfN~ll~~~~~~~~gl~v~~Ld~~~ 286 (355)
+|++.+..+.- ...+.+.+.+....+ ....||+++|.+..+ +++.||..+
T Consensus 154 sGv~l~nl~~~r~~~~~~~~~~~~~~~~~~~~~~DQd~LN~~~~~--------~~~~L~~~~ 207 (248)
T cd04194 154 SGVLLINLKKWREENITEKLLELIKEYGGRLIYPDQDILNAVLKD--------KILYLPPRY 207 (248)
T ss_pred ecchheeHHHHHHhhhHHHHHHHHHhCCCceeeCChHHHHHHHhC--------CeEEcCccc
Confidence 99999987642 223333333322222 346999999999952 278887554
No 4
>PF05637 Glyco_transf_34: galactosyl transferase GMA12/MNN10 family; InterPro: IPR008630 This family contains a number of glycosyltransferase enzymes that contain a DXD motif. This family includes a number of Caenorhabditis elegans homologues where the DXD is replaced by DXH. Some members of this family are included in glycosyltransferase family 34.; GO: 0016758 transferase activity, transferring hexosyl groups, 0016021 integral to membrane; PDB: 2P72_B 2P73_A 2P6W_A.
Probab=97.75 E-value=3.4e-05 Score=73.06 Aligned_cols=156 Identities=14% Similarity=0.130 Sum_probs=34.4
Q ss_pred EEEEEeChHHHHHhhhcCCcEEEecCCCCCCCccccccccHHHHHHHHHHHHHHHHHHHcC---CcEEEecccEEEccCc
Q 018473 123 LVVVALDSKALDHCLSTHPHCYALNTSGLDFSGKEAYFMTSSYLEMMWIRIRLLSDVLAMG---YNFVFTDADIVWLQNP 199 (355)
Q Consensus 123 llVvAlD~~a~~~c~~~g~~C~~~~~~~~d~s~~~~~~gs~~f~~m~w~K~~~l~~vL~lG---y~VLfsDvDVVWlRnP 199 (355)
++..++... .++|+..|..++.......+. .-....|.|+.++++.+..= ==|++.|.|++...-=
T Consensus 25 ~~~~~~~Nr-~~Ya~~HgY~~~~~~~~~~~~----------~~~~~~W~K~~~lr~~m~~~P~~~wv~~lD~Dali~n~~ 93 (239)
T PF05637_consen 25 YLKKSIQNR-VDYARRHGYDLYYRNIQEYDD----------PERPGSWAKIPALRAAMKKYPEAEWVWWLDSDALIMNPD 93 (239)
T ss_dssp --------H-HHHHHHHT-EEEEE-S--S------------SHHHHHHTHHHHHHHHHHH-TT-SEEEEE-TTEEE----
T ss_pred ccchhHHHH-HHHHHhcCCEEEEEChHHcCC----------CCCChhhHHHHHHHHHHHhCCCCCEEEEEcCCeEEEecc
Confidence 333344444 689999999887754322111 12234599999999999642 3489999999875422
Q ss_pred cc---ccC-C-CC------CeE-eecCCCCCC-----CC-------CCCCCCCeeEEEEEeChhHHHHHHHHHHHHHcCC
Q 018473 200 FQ---RFD-P-DA------DFQ-IACDRFSGN-----SF-------NLRNEPNGGFNYVKSNNRTIEFYKFWYNSRKMFP 255 (355)
Q Consensus 200 ~~---~f~-~-~a------Di~-is~D~~~g~-----~~-------d~~~~~NtGf~yvR~T~~T~~f~~~W~~~r~~~p 255 (355)
++ ++. + .- |.- +.-+...++ ++ .-.+.+|+|++++|.++-|+.|++.|..-+....
T Consensus 94 ~~L~~~il~p~~L~~~~~r~~~~~p~~~~~~~~~~~~~~~~~li~t~d~~gLNtGsFliRns~ws~~fLd~w~~~~~~~~ 173 (239)
T PF05637_consen 94 FSLEEHILSPSRLDSLLLRDVPIVPPDSIIKTYSVIDGNDIHLIITQDWNGLNTGSFLIRNSPWSRDFLDAWADPLYRNY 173 (239)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 32 111 0 00 000 111111000 00 0124589999999999999999999976443322
Q ss_pred -----CCCchHHHHHHHcCCCCCCCceEEEEecccCcCCcc
Q 018473 256 -----GLHDQDVLNEIKFDPYIQKIQQKLLILDLHLRTGEI 291 (355)
Q Consensus 256 -----~~~DQ~vfN~ll~~~~~~~~gl~v~~Ld~~~FgG~~ 291 (355)
..+||.+|-.++... ....-++.++|+..|+.|.
T Consensus 174 ~~~~~~~~EQsAl~~ll~~~--~~~~~~~~~vpq~~~nsy~ 212 (239)
T PF05637_consen 174 DWDQLEFDEQSALEHLLQWH--PEILSKVALVPQRWFNSYP 212 (239)
T ss_dssp -----------------------------------------
T ss_pred cccccccccccccccccccc--ccccccccccccccccccc
Confidence 247999999888621 2233467788988887774
No 5
>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+.
Probab=97.48 E-value=0.005 Score=57.85 Aligned_cols=113 Identities=19% Similarity=0.187 Sum_probs=71.1
Q ss_pred HHHHHHHHHHHHHHHcCCc-EEEecccEEEccCcccccCCC---CCeEeecCCCC---CC-------CCCCCCCCCeeEE
Q 018473 167 EMMWIRIRLLSDVLAMGYN-FVFTDADIVWLQNPFQRFDPD---ADFQIACDRFS---GN-------SFNLRNEPNGGFN 232 (355)
Q Consensus 167 ~m~w~K~~~l~~vL~lGy~-VLfsDvDVVWlRnP~~~f~~~---aDi~is~D~~~---g~-------~~d~~~~~NtGf~ 232 (355)
..++.|.. +-.++. +++ ||+.|+|++-++|.-+.+..+ .-+.+..|... .. ........|+|+|
T Consensus 81 ~~~y~RL~-i~~llp-~~~kvlYLD~D~iv~~di~~L~~~~l~~~~~aav~d~~~~~~~~~~~~~~~~~~~~~yfNsGVm 158 (246)
T cd00505 81 IVTLTKLH-LPNLVP-DYDKILYVDADILVLTDIDELWDTPLGGQELAAAPDPGDRREGKYYRQKRSHLAGPDYFNSGVF 158 (246)
T ss_pred cceeHHHH-HHHHhh-ccCeEEEEcCCeeeccCHHHHhhccCCCCeEEEccCchhhhccchhhcccCCCCCCCceeeeeE
Confidence 33444543 445567 775 999999999999988887532 33444444321 00 0011246899999
Q ss_pred EEEeChhH-HHHHHHHHHHHH---cCCCCCchHHHHHHHcCCCCCCCceEEEEecccC
Q 018473 233 YVKSNNRT-IEFYKFWYNSRK---MFPGLHDQDVLNEIKFDPYIQKIQQKLLILDLHL 286 (355)
Q Consensus 233 yvR~T~~T-~~f~~~W~~~r~---~~p~~~DQ~vfN~ll~~~~~~~~gl~v~~Ld~~~ 286 (355)
.+..+.-. ..+.+....... ......||+++|.++.. .+.++..||..+
T Consensus 159 linl~~~r~~~~~~~~~~~~~~~~~~~~~~DQd~LN~~~~~-----~~~~i~~L~~~w 211 (246)
T cd00505 159 VVNLSKERRNQLLKVALEKWLQSLSSLSGGDQDLLNTFFKQ-----VPFIVKSLPCIW 211 (246)
T ss_pred EEechHHHHHHHHHHHHHHHHhhcccCccCCcHHHHHHHhc-----CCCeEEECCCee
Confidence 99998874 445544433222 22467999999999852 235788888664
No 6
>PLN00176 galactinol synthase
Probab=97.38 E-value=0.0032 Score=62.68 Aligned_cols=171 Identities=17% Similarity=0.141 Sum_probs=96.2
Q ss_pred CCeEEEE--EccccccCCCchHHHHHHHhhhccCCcccCCcEEEEEeCh---HHHHHhhhcCCcEEEecCCCCCCCcccc
Q 018473 84 DNTVIIT--TLNQAWAEPNSIFDIFLESFRTGNGTGKLLDHLVVVALDS---KALDHCLSTHPHCYALNTSGLDFSGKEA 158 (355)
Q Consensus 84 d~tVIlT--~~N~ay~~p~s~lDlfLes~~~g~~t~~l~~nllVvAlD~---~a~~~c~~~g~~C~~~~~~~~d~s~~~~ 158 (355)
.+...|| ++|..|. +|.+ ....|++.. ++ -..++|+..++ +..+.+++.|......+ .........
T Consensus 21 ~~~AyVT~L~~n~~Y~-~Ga~--vL~~SLr~~-~s---~~~lVvlVt~dVp~e~r~~L~~~g~~V~~V~--~i~~~~~~~ 91 (333)
T PLN00176 21 AKRAYVTFLAGNGDYV-KGVV--GLAKGLRKV-KS---AYPLVVAVLPDVPEEHRRILVSQGCIVREIE--PVYPPENQT 91 (333)
T ss_pred CceEEEEEEecCcchH-HHHH--HHHHHHHHh-CC---CCCEEEEECCCCCHHHHHHHHHcCCEEEEec--ccCCccccc
Confidence 3667777 4678885 3322 255677642 22 34455555554 44566666665443322 221111122
Q ss_pred ccccHHHHHHHHHHHHHHHHHHHcCC-cEEEecccEEEccCcccccCCCC-CeEeecCCCCCC-----------------
Q 018473 159 YFMTSSYLEMMWIRIRLLSDVLAMGY-NFVFTDADIVWLQNPFQRFDPDA-DFQIACDRFSGN----------------- 219 (355)
Q Consensus 159 ~~gs~~f~~m~w~K~~~l~~vL~lGy-~VLfsDvDVVWlRnP~~~f~~~a-Di~is~D~~~g~----------------- 219 (355)
.+. ..+..+.+.|.++.. +. .| .+|+.|+|++-++|--+.|.... -+....|++...
T Consensus 92 ~~~-~~~~~i~~tKl~iw~-l~--~ydkvlyLDaD~lv~~nid~Lf~~~~~~~aAV~dc~~~~~~~~~p~~~~~~c~~~~ 167 (333)
T PLN00176 92 QFA-MAYYVINYSKLRIWE-FV--EYSKMIYLDGDIQVFENIDHLFDLPDGYFYAVMDCFCEKTWSHTPQYKIGYCQQCP 167 (333)
T ss_pred ccc-cchhhhhhhhhhhcc-cc--ccceEEEecCCEEeecChHHHhcCCCcceEEEecccccccccccccccccccccch
Confidence 332 335556777887544 22 36 59999999999999877775322 233334433210
Q ss_pred -----CCC----CCCCCCeeEEEEEeChhHHHHHHHHHHHHHcCCCCCchHHHHHHHc
Q 018473 220 -----SFN----LRNEPNGGFNYVKSNNRTIEFYKFWYNSRKMFPGLHDQDVLNEIKF 268 (355)
Q Consensus 220 -----~~d----~~~~~NtGf~yvR~T~~T~~f~~~W~~~r~~~p~~~DQ~vfN~ll~ 268 (355)
+.. ....+|+|++.+.|+..+.+=+-+..... ..-...||++||.+.+
T Consensus 168 ~~~~wp~~~g~~~~~yFNSGVlvinps~~~~~~ll~~l~~~-~~~~f~DQD~LN~~F~ 224 (333)
T PLN00176 168 DKVTWPAELGPPPPLYFNAGMFVFEPSLSTYEDLLETLKIT-PPTPFAEQDFLNMFFR 224 (333)
T ss_pred hhccchhhccCCCCCeEEeEEEEEEcCHHHHHHHHHHHHhc-CCCCCCCHHHHHHHHc
Confidence 000 12369999999999987743333332211 1124589999999996
No 7
>PLN03182 xyloglucan 6-xylosyltransferase; Provisional
Probab=97.21 E-value=0.0029 Score=64.13 Aligned_cols=144 Identities=13% Similarity=0.172 Sum_probs=93.4
Q ss_pred HHHhhhcCCcEEEecCCCCCCCccccccccHHHHHHHHHHHHHHHHHHHcCC---cEEEecccEEEccCccccc---CCC
Q 018473 133 LDHCLSTHPHCYALNTSGLDFSGKEAYFMTSSYLEMMWIRIRLLSDVLAMGY---NFVFTDADIVWLQNPFQRF---DPD 206 (355)
Q Consensus 133 ~~~c~~~g~~C~~~~~~~~d~s~~~~~~gs~~f~~m~w~K~~~l~~vL~lGy---~VLfsDvDVVWlRnP~~~f---~~~ 206 (355)
.++|+.+|..++. ... .+..+. .-.|.|+-++++++..-- -+.+.|.|.+.+--+++.- +.+
T Consensus 157 ~dYAr~HGY~~fy-n~~--~ld~~~---------p~~WaKlpaLR~aM~~~PeaEWiWWLDsDALImNmsfelPlery~~ 224 (429)
T PLN03182 157 IDYCRLHGIEIFY-NMA--HLDAEM---------AGFWAKLPLLRKLMLAHPEVEWIWWMDSDALFTDMTFEIPLEKYEG 224 (429)
T ss_pred HHHHHHhCCEEEe-ehh--hcCcCC---------CcchhHHHHHHHHHHHCCCceEEEEecCCceeecCCCCCCHhHcCC
Confidence 3678888887766 321 121101 124899999999986632 3788999998865333311 123
Q ss_pred CCeEeecCCCCCCCCC--CCCCCCeeEEEEEeChhHHHHHHHHHHHHHc-------------------CCCCCchHHHHH
Q 018473 207 ADFQIACDRFSGNSFN--LRNEPNGGFNYVKSNNRTIEFYKFWYNSRKM-------------------FPGLHDQDVLNE 265 (355)
Q Consensus 207 aDi~is~D~~~g~~~d--~~~~~NtGf~yvR~T~~T~~f~~~W~~~r~~-------------------~p~~~DQ~vfN~ 265 (355)
.++++- ++...-.. -.+-+|+|.|++|.++-++.|++.|..+..+ .+...||.++-.
T Consensus 225 ~NlVih--g~~~~l~~~kdW~GLNtGsFLIRNcqWSldlLDaWa~mgp~~~~~~~~g~~l~~~l~~rp~~eaDDQSAlvy 302 (429)
T PLN03182 225 YNLVIH--GWDELVYDQKSWIGLNTGSFLIRNCQWSLDLLDAWAPMGPKGPIRDEAGKILTAELKGRPAFEADDQSALVY 302 (429)
T ss_pred cCeeec--cchhhheeccccCccceeeEEEEcCHHHHHHHHHHHhcCCCCchhhhHHHHHHHhhcCCCCCCcccHHHHHH
Confidence 333331 11111000 1245899999999999999999999875431 235799999998
Q ss_pred HHcCCCCCCCceEEEEecccCcCCcc
Q 018473 266 IKFDPYIQKIQQKLLILDLHLRTGEI 291 (355)
Q Consensus 266 ll~~~~~~~~gl~v~~Ld~~~FgG~~ 291 (355)
++.. .-...+-++.+-+..||.||.
T Consensus 303 Ll~~-~~~~w~~kv~le~~y~l~Gyw 327 (429)
T PLN03182 303 LLLT-QRERWGDKVYLENSYYLHGYW 327 (429)
T ss_pred HHHh-cchhhccceEEeecceecccc
Confidence 8852 234567788888888899994
No 8
>cd06914 GT8_GNT1 GNT1 is a fungal enzyme that belongs to the GT 8 family. N-acetylglucosaminyltransferase is a fungal enzyme that catalyzes the addition of N-acetyl-D-glucosamine to mannotetraose side chains by an alpha 1-2 linkage during the synthesis of mannan. The N-acetyl-D-glucosamine moiety in mannan plays a role in the attachment of mannan to asparagine residues in proteins. The mannotetraose and its N-acetyl-D-glucosamine derivative side chains of mannan are the principle immunochemical determinants on the cell surface. N-acetylglucosaminyltransferase is a member of glycosyltransferase family 8, which are, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed, retaining glycosyltransferases.
Probab=97.06 E-value=0.0028 Score=61.62 Aligned_cols=106 Identities=13% Similarity=0.066 Sum_probs=68.4
Q ss_pred HHHHHHHHHHHHcCC-cEEEecccEEEccCcccccCCCCCe-EeecCCCCCCCCCCCCCCCeeEEEEEeChhHHHHHHHH
Q 018473 170 WIRIRLLSDVLAMGY-NFVFTDADIVWLQNPFQRFDPDADF-QIACDRFSGNSFNLRNEPNGGFNYVKSNNRTIEFYKFW 247 (355)
Q Consensus 170 w~K~~~l~~vL~lGy-~VLfsDvDVVWlRnP~~~f~~~aDi-~is~D~~~g~~~d~~~~~NtGf~yvR~T~~T~~f~~~W 247 (355)
+.|..+... ..| .||+.|+|++-++|.-+.|..+-.. ..+-+ ....+|+|+|.+.|+..+-.=+.+-
T Consensus 81 ~tKl~~~~l---~~y~kvlyLDaD~l~~~~ideLf~~~~~~~~Aap~--------~~~~FNSGvmvi~ps~~~~~~l~~~ 149 (278)
T cd06914 81 LTKLRAFNQ---TEYDRIIYFDSDSIIRHPMDELFFLPNYIKFAAPR--------AYWKFASHLMVIKPSKEAFKELMTE 149 (278)
T ss_pred HHHHHhccc---cceeeEEEecCChhhhcChHHHhcCCcccceeeec--------CcceecceeEEEeCCHHHHHHHHHH
Confidence 556665554 357 4999999999999877777543111 11111 1126999999999999774433333
Q ss_pred HHHHHc-CCCCCchHHHHHHHcCCCCCCCceEEEEecccCc
Q 018473 248 YNSRKM-FPGLHDQDVLNEIKFDPYIQKIQQKLLILDLHLR 287 (355)
Q Consensus 248 ~~~r~~-~p~~~DQ~vfN~ll~~~~~~~~gl~v~~Ld~~~F 287 (355)
...... ..+..||+++|.++. +......-.+.+||...+
T Consensus 150 ~~~~~~~~~~~~DQdiLN~~~~-~~~~~~~~~~~~Lp~~~y 189 (278)
T cd06914 150 ILPAYLNKKNEYDMDLINEEFY-NSKQLFKPSVLVLPHRQY 189 (278)
T ss_pred HHHhcccCCCCCChHHHHHHHh-CCccccCcceEEcCcccc
Confidence 222222 336799999999995 333334556888887654
No 9
>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 8 GT8 from CAZY comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase (2.4.1.44 from EC), lipopolysaccharide glucosyltransferase 1 (2.4.1.58 from EC), glycogenin glucosyltransferase (2.4.1.186 from EC), inositol 1-alpha-galactosyltransferase (2.4.1.123 from EC). These enzymes have a distant similarity to family GT_24. ; GO: 0016757 transferase activity, transferring glycosyl groups; PDB: 1LL0_D 1ZCV_A 3USR_A 3V90_A 1ZCU_A 1ZCT_A 3V91_A 1ZCY_A 1ZDG_A 1ZDF_A ....
Probab=96.13 E-value=0.01 Score=54.15 Aligned_cols=111 Identities=18% Similarity=0.152 Sum_probs=65.1
Q ss_pred HHHHHHHHHHHHHHHHcCCc-EEEecccEEEccCcccccCC---CCCeEeecCC-----CCCC-------CCCCCCCCCe
Q 018473 166 LEMMWIRIRLLSDVLAMGYN-FVFTDADIVWLQNPFQRFDP---DADFQIACDR-----FSGN-------SFNLRNEPNG 229 (355)
Q Consensus 166 ~~m~w~K~~~l~~vL~lGy~-VLfsDvDVVWlRnP~~~f~~---~aDi~is~D~-----~~g~-------~~d~~~~~Nt 229 (355)
..+++.|..+-. +| .+|+ +|+.|+|++-++|.-+.|.. +.-+....|. .... ........|+
T Consensus 83 ~~~~~~rl~i~~-ll-~~~drilyLD~D~lv~~dl~~lf~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~fNs 160 (250)
T PF01501_consen 83 SPATFARLFIPD-LL-PDYDRILYLDADTLVLGDLDELFDLDLQGKYLAAVEDESFDNFPNKRFPFSERKQPGNKPYFNS 160 (250)
T ss_dssp GGGGGGGGGHHH-HS-TTSSEEEEE-TTEEESS-SHHHHC---TTSSEEEEE----HHHHTSTTSSEEECESTTTTSEEE
T ss_pred cHHHHHHhhhHH-HH-hhcCeEEEEcCCeeeecChhhhhcccchhhhccccccchhhhhhhcccchhhcccCcccccccC
Confidence 334444664443 44 5665 99999999999999888752 2223333340 0000 0112456999
Q ss_pred eEEEEEeChhHHHHHHHH-HHHHHcCC---CCCchHHHHHHHcCCCCCCCceEEEEecccC
Q 018473 230 GFNYVKSNNRTIEFYKFW-YNSRKMFP---GLHDQDVLNEIKFDPYIQKIQQKLLILDLHL 286 (355)
Q Consensus 230 Gf~yvR~T~~T~~f~~~W-~~~r~~~p---~~~DQ~vfN~ll~~~~~~~~gl~v~~Ld~~~ 286 (355)
|++.+.++.-..+-+... ......+. ...||+++|.++. -+++.||..+
T Consensus 161 Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DQ~~ln~~~~--------~~~~~L~~~~ 213 (250)
T PF01501_consen 161 GVMLFNPSKWRKENILQKLIEWLEQNGMKLGFPDQDILNIVFY--------GNIKPLPCRY 213 (250)
T ss_dssp EEEEEEHHHHHHHHHHHHHHHHHHHTTTT-SSCHHHHHHHHHT--------TGEEEEEGGG
T ss_pred cEEEEeechhhhhhhhhhhhhhhhhcccccCcCchHHHhhhcc--------ceeEEECchh
Confidence 999999888776544433 33322232 4699999999985 2566777543
No 10
>PLN03181 glycosyltransferase; Provisional
Probab=95.78 E-value=0.11 Score=53.01 Aligned_cols=142 Identities=14% Similarity=0.242 Sum_probs=90.7
Q ss_pred HHHhhhcCCcEEEecCCCCCCCccccccccHHHHHHHHHHHHHHHHHHHcC---CcEEEecccEEEccCccccc----CC
Q 018473 133 LDHCLSTHPHCYALNTSGLDFSGKEAYFMTSSYLEMMWIRIRLLSDVLAMG---YNFVFTDADIVWLQNPFQRF----DP 205 (355)
Q Consensus 133 ~~~c~~~g~~C~~~~~~~~d~s~~~~~~gs~~f~~m~w~K~~~l~~vL~lG---y~VLfsDvDVVWlRnP~~~f----~~ 205 (355)
.++|+.+|..+|.... .+.. . ....|.|+-+++..+..= --|.+.|.|++.+ ||-.-+ +.
T Consensus 158 ~dYArrHGY~lf~~~a---~Ld~---~------~p~~WaKipalRaAM~a~PeAEWfWWLDsDALIM-Np~~sLPl~ry~ 224 (453)
T PLN03181 158 VDYCRIHGYDIFYNNA---LLHP---K------MNSYWAKLPVVRAAMLAHPEAEWIWWVDSDAVFT-DMDFKLPLHRYR 224 (453)
T ss_pred HHHHHHhCCcEEEecc---ccCc---c------CchhhhHHHHHHHHHHHCCCceEEEEecCCceee-cCCCCCCHhhcC
Confidence 4789999988886542 1111 0 134689999999887652 2388999999776 552222 12
Q ss_pred CCCeEeecCCCCCCCCCC--CCCCCeeEEEEEeChhHHHHHHHHHHHHH-------------------cCCCCCchHHHH
Q 018473 206 DADFQIACDRFSGNSFNL--RNEPNGGFNYVKSNNRTIEFYKFWYNSRK-------------------MFPGLHDQDVLN 264 (355)
Q Consensus 206 ~aDi~is~D~~~g~~~d~--~~~~NtGf~yvR~T~~T~~f~~~W~~~r~-------------------~~p~~~DQ~vfN 264 (355)
+..+++ .++....+.. -.-+|+|.|++|.+.-+.+|++.|..+-. ..+...||.++-
T Consensus 225 ~~NLvv--hg~p~~vy~~qdw~GlN~GsFLIRNcqWSl~LLDaWa~Mgp~~p~~~~~G~~l~~~l~~r~~~eaDDQsaLv 302 (453)
T PLN03181 225 DHNLVV--HGWPKLIYEKRSWTALNAGVFLIRNCQWSLDFMDAWASMGPASPEYAKWGKILRSTFKDKLFPESDDQSALV 302 (453)
T ss_pred Cccccc--cCCcccccccccccccceeeeEEecCHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhCCCCCCCccchHHHH
Confidence 223322 1111110111 24589999999999999999999977311 134679999998
Q ss_pred HHHcCCCCCCCceEEEEecccCcCCc
Q 018473 265 EIKFDPYIQKIQQKLLILDLHLRTGE 290 (355)
Q Consensus 265 ~ll~~~~~~~~gl~v~~Ld~~~FgG~ 290 (355)
.++-. .-.+-+-++.+=...||-||
T Consensus 303 yll~~-~~~~w~~k~ylE~~yy~~Gy 327 (453)
T PLN03181 303 YLLYK-HKEKWGDKIYLEGEYYFEGY 327 (453)
T ss_pred HHHHh-ccchhccceeeecceeeeee
Confidence 76642 23456777776677777888
No 11
>COG1442 RfaJ Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane]
Probab=95.66 E-value=0.07 Score=53.08 Aligned_cols=174 Identities=17% Similarity=0.135 Sum_probs=94.8
Q ss_pred EEEEccccccCCCchHHHHHHHhhhccCCcccCCcEEEEEeChHHHHHhhhcC--CcEEEec--CCCCCCCccccccccH
Q 018473 88 IITTLNQAWAEPNSIFDIFLESFRTGNGTGKLLDHLVVVALDSKALDHCLSTH--PHCYALN--TSGLDFSGKEAYFMTS 163 (355)
Q Consensus 88 IlT~~N~ay~~p~s~lDlfLes~~~g~~t~~l~~nllVvAlD~~a~~~c~~~g--~~C~~~~--~~~~d~s~~~~~~gs~ 163 (355)
|+-.++.+|+.|.+ .-+-|.....+....-=|.++.-.+++-.+.+++.- ..++..- .+...+.. ..--++
T Consensus 5 Iv~a~D~nY~~~~g---vsI~SiL~~n~~~~~~fhil~~~i~~e~~~~l~~~~~~f~~~i~~~~id~~~~~~--~~~~~~ 79 (325)
T COG1442 5 IAFAFDKNYLIPAG---VSIYSLLEHNRKIFYKFHILVDGLNEEDKKKLNETAEPFKSFIVLEVIDIEPFLD--YPPFTK 79 (325)
T ss_pred EEEEcccccchhHH---HHHHHHHHhCccccEEEEEEecCCCHHHHHHHHHHHHhhccceeeEEEechhhhc--cccccc
Confidence 66677999986522 123344431111133446777888888888887752 1121110 01111111 010356
Q ss_pred HHHHHHHHHHHHHHHHHHcCCcEEEecccEEEccCcccccC---CCCCeEeecCCCCC----------CCCCCCCCCCee
Q 018473 164 SYLEMMWIRIRLLSDVLAMGYNFVFTDADIVWLQNPFQRFD---PDADFQIACDRFSG----------NSFNLRNEPNGG 230 (355)
Q Consensus 164 ~f~~m~w~K~~~l~~vL~lGy~VLfsDvDVVWlRnP~~~f~---~~aDi~is~D~~~g----------~~~d~~~~~NtG 230 (355)
.|..|+..|.- +-++....=.+|+.|+|||..++=-+.|. .+.=+.+..|.+.. .....+...|+|
T Consensus 80 ~~s~~v~~R~f-iadlf~~~dK~lylD~Dvi~~g~l~~lf~~~~~~~~~aaV~D~~~~~~~~~~~~~~~~~~~~~yFNaG 158 (325)
T COG1442 80 RFSKMVLVRYF-LADLFPQYDKMLYLDVDVIFCGDLSELFFIDLEEYYLAAVRDVFSHYMKEGALRLEKGDLEGSYFNAG 158 (325)
T ss_pred chHHHHHHHHH-HHHhccccCeEEEEecCEEEcCcHHHHHhcCCCcceEEEEeehhhhhhhhhhhHhhhcccccccCccc
Confidence 77778887754 44555666779999999999997655542 12222333443320 122344669999
Q ss_pred EEEE-----EeChhHHHHHHHHHHHHHcCCCCCchHHHHHHHc
Q 018473 231 FNYV-----KSNNRTIEFYKFWYNSRKMFPGLHDQDVLNEIKF 268 (355)
Q Consensus 231 f~yv-----R~T~~T~~f~~~W~~~r~~~p~~~DQ~vfN~ll~ 268 (355)
++++ |...-+.++++--.. ....-...||+++|.+++
T Consensus 159 ~llinl~~W~~~~i~~k~i~~~~~-~~~~~~~~DQdiLN~i~~ 200 (325)
T COG1442 159 VLLINLKLWREENIFEKLIELLKD-KENDLLYPDQDILNMIFE 200 (325)
T ss_pred eeeehHHHHHHhhhHHHHHHHHhc-cccccCCccccHHHHHHH
Confidence 9995 333333333332211 112224588999999996
No 12
>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis. The catalytic domain of LARGE is a putative glycosyltransferase. Mutations of LARGE in mouse and human cause dystroglycanopathies, a disease associated with hypoglycosylation of the membrane protein alpha-dystroglycan (alpha-DG) and consequent loss of extracellular ligand binding. LARGE needs to both physically interact with alpha-dystroglycan and function as a glycosyltransferase in order to stimulate alpha-dystroglycan hyperglycosylation. LARGE localizes to the Golgi apparatus and contains three conserved DxD motifs. While two of the motifs are indispensible for glycosylation function, one is important for localization of th eenzyme. LARGE was originally named because it covers approximately large trunck of genomic DNA, more than 600bp long. The predicted protein structure contains an N-terminal cytoplasmic domain, a transmembrane region, a coiled-coil
Probab=95.08 E-value=0.065 Score=52.02 Aligned_cols=94 Identities=16% Similarity=0.168 Sum_probs=53.4
Q ss_pred HHHHHHHcCC-cEEEecccEEEccCcccccCC-----CCCeEeec-CC---CCCC------C-CCCCCCCCeeEEEEEe-
Q 018473 175 LLSDVLAMGY-NFVFTDADIVWLQNPFQRFDP-----DADFQIAC-DR---FSGN------S-FNLRNEPNGGFNYVKS- 236 (355)
Q Consensus 175 ~l~~vL~lGy-~VLfsDvDVVWlRnP~~~f~~-----~aDi~is~-D~---~~g~------~-~d~~~~~NtGf~yvR~- 236 (355)
++-++|..-+ .||+.|+|+|...|.-+.+.. +.-+.... |. +.+. + ...+..+|+|++++-=
T Consensus 89 ~ip~llp~~~dkvLYLD~Diiv~~di~eL~~~~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~yFNsGVmlinL~ 168 (280)
T cd06431 89 VLTEALPSDLEKVIVLDTDITFATDIAELWKIFHKFTGQQVLGLVENQSDWYLGNLWKNHRPWPALGRGFNTGVILLDLD 168 (280)
T ss_pred HHHHhchhhcCEEEEEcCCEEEcCCHHHHHHHhhhcCCCcEEEEeccchhhhhhhhhhccCCCcccccceeeeeeeeeHH
Confidence 4556665445 599999999999999887643 22232222 22 1111 1 1123469999999643
Q ss_pred ----ChhHHHHHHHHHHHHH--cCCCCCchHHHHHHHc
Q 018473 237 ----NNRTIEFYKFWYNSRK--MFPGLHDQDVLNEIKF 268 (355)
Q Consensus 237 ----T~~T~~f~~~W~~~r~--~~p~~~DQ~vfN~ll~ 268 (355)
..-+.++.....+... .....+||+++|.++.
T Consensus 169 ~wR~~~~~~~~~~~~~~~~~~~~~~~~~DQDiLN~v~~ 206 (280)
T cd06431 169 KLRKMKWESMWRLTAERELMSMLSTSLADQDIFNAVIK 206 (280)
T ss_pred HHHhhCHHHHHHHHHHHHHhhcCCCCcCcHHHHHHHHc
Confidence 3333333221111101 1235799999999995
No 13
>PRK15171 lipopolysaccharide 1,3-galactosyltransferase; Provisional
Probab=94.54 E-value=0.53 Score=46.78 Aligned_cols=93 Identities=18% Similarity=0.125 Sum_probs=52.2
Q ss_pred HHHHHHcCC-cEEEecccEEEccCcccccCCCC--C-eEee-cCCCC----------CCCCCCCCCCCeeEEEEE-----
Q 018473 176 LSDVLAMGY-NFVFTDADIVWLQNPFQRFDPDA--D-FQIA-CDRFS----------GNSFNLRNEPNGGFNYVK----- 235 (355)
Q Consensus 176 l~~vL~lGy-~VLfsDvDVVWlRnP~~~f~~~a--D-i~is-~D~~~----------g~~~d~~~~~NtGf~yvR----- 235 (355)
+-++|...+ .||+.|+|++-.+|--+.+.-+- + +... .|+.. +.+.......|+|++++-
T Consensus 113 ip~llp~~~dkvLYLD~Diiv~~dl~~L~~~dl~~~~~aav~~d~~~~~~~~~~~~l~~~~~~~~YFNsGVlliNl~~wR 192 (334)
T PRK15171 113 IADYFIDKTDKVLYLDADIACKGSIKELIDLDFAENEIAAVVAEGDAEWWSKRAQSLQTPGLASGYFNSGFLLINIPAWA 192 (334)
T ss_pred HHHhhhhhcCEEEEeeCCEEecCCHHHHHhccCCCCeEEEEEeccchhHHHHHHHhcCCccccccceecceEEEcHHHHH
Confidence 445554445 59999999999998877775432 2 2222 23211 011111246899999964
Q ss_pred eChhHHHHHHHHHHHHH-cCCCCCchHHHHHHHc
Q 018473 236 SNNRTIEFYKFWYNSRK-MFPGLHDQDVLNEIKF 268 (355)
Q Consensus 236 ~T~~T~~f~~~W~~~r~-~~p~~~DQ~vfN~ll~ 268 (355)
-..-+.++++....... ..-...||++||.++.
T Consensus 193 e~~i~~k~~~~l~~~~~~~~~~~~DQDiLN~~~~ 226 (334)
T PRK15171 193 QENISAKAIEMLADPEIVSRITHLDQDVLNILLA 226 (334)
T ss_pred HhhHHHHHHHHHhccccccceeecChhHHHHHHc
Confidence 33344444432211000 0123579999999995
No 14
>PF03314 DUF273: Protein of unknown function, DUF273; InterPro: IPR004988 This is a family of proteins of unknown function.
Probab=94.40 E-value=0.24 Score=46.41 Aligned_cols=95 Identities=25% Similarity=0.275 Sum_probs=70.1
Q ss_pred HHHHHHHHHHHHHHHHcCCcEEEecccEEEccCcccc----cCCCCCeEeecCCCCCCCCCCCCCCCeeEEEEEeChhHH
Q 018473 166 LEMMWIRIRLLSDVLAMGYNFVFTDADIVWLQNPFQR----FDPDADFQIACDRFSGNSFNLRNEPNGGFNYVKSNNRTI 241 (355)
Q Consensus 166 ~~m~w~K~~~l~~vL~lGy~VLfsDvDVVWlRnP~~~----f~~~aDi~is~D~~~g~~~d~~~~~NtGf~yvR~T~~T~ 241 (355)
...+.+|--++..+|..-=-|||.|+||.- -||-.. +.++.|+.+.. .+. ...+.+|-|.+|.|+.++
T Consensus 25 kd~fFrRHCvva~~L~~~~~vlflDaDigV-vNp~~~iEefid~~~Di~fyd-R~~------n~Ei~agsYlvkNT~~~~ 96 (222)
T PF03314_consen 25 KDKFFRRHCVVAKILPEYDWVLFLDADIGV-VNPNRRIEEFIDEGYDIIFYD-RFF------NWEIAAGSYLVKNTEYSR 96 (222)
T ss_pred hhHHHHHHHHHHHHhccCCEEEEEcCCcee-ecCcccHHHhcCCCCcEEEEe-ccc------chhhhhccceeeCCHHHH
Confidence 445788999999999865569999999964 478644 45788998863 332 134788999999999999
Q ss_pred HHHHHHHHHHHcCCC---CCchHHHHHHHc
Q 018473 242 EFYKFWYNSRKMFPG---LHDQDVLNEIKF 268 (355)
Q Consensus 242 ~f~~~W~~~r~~~p~---~~DQ~vfN~ll~ 268 (355)
+|++.|...-.+-|. ..|-.++...+.
T Consensus 97 ~fl~~~a~~E~~lP~sfhGtDNGAlH~~L~ 126 (222)
T PF03314_consen 97 DFLKEWADYEFKLPNSFHGTDNGALHIFLA 126 (222)
T ss_pred HHHHHHhhhCccCCCccccCccHHHHHHHH
Confidence 999999775444453 367677665543
No 15
>cd06430 GT8_like_2 GT8_like_2 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=93.28 E-value=0.94 Score=44.75 Aligned_cols=104 Identities=15% Similarity=0.238 Sum_probs=58.3
Q ss_pred HHHHHHcCC-cEEEecccEEEccCcccccCC--CC-C--eEee-cCCC------CC----CCCCCCCCCCeeEEEEEeCh
Q 018473 176 LSDVLAMGY-NFVFTDADIVWLQNPFQRFDP--DA-D--FQIA-CDRF------SG----NSFNLRNEPNGGFNYVKSNN 238 (355)
Q Consensus 176 l~~vL~lGy-~VLfsDvDVVWlRnP~~~f~~--~a-D--i~is-~D~~------~g----~~~d~~~~~NtGf~yvR~T~ 238 (355)
+-++|. -+ .||+.|+||+..+|.-+.+.. +. | +... .|.. .. .+......+|+|++++-=+.
T Consensus 90 ip~lLp-~~dkvLYLD~Dii~~~dI~eL~~~~~df~~~~~aA~v~e~~~~~~~~~~~~~~~~~~~~~gFNSGVmLmNL~~ 168 (304)
T cd06430 90 LPSLLP-DVDSLLYVDTDILFLRPVEEIWSFLKKFNSTQLAAMAPEHEEPNIGWYNRFARHPYYGKTGVNSGVMLMNLTR 168 (304)
T ss_pred HHHHhh-hhceEEEeccceeecCCHHHHHHHHhhcCCCeEEEEEecccccchhhhhhhcccCcccccccccceeeeeHHH
Confidence 444555 33 699999999999988776543 21 1 2222 1221 11 11111124899999975433
Q ss_pred hH------------HHHHHHHHHHHHcCC---CCCchHHHHHHHcCCCCCCCceEEEEeccc
Q 018473 239 RT------------IEFYKFWYNSRKMFP---GLHDQDVLNEIKFDPYIQKIQQKLLILDLH 285 (355)
Q Consensus 239 ~T------------~~f~~~W~~~r~~~p---~~~DQ~vfN~ll~~~~~~~~gl~v~~Ld~~ 285 (355)
=- ..+-+.|.+...++. ...||++||.++.+ ..-++.+||..
T Consensus 169 wR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~DQDiLN~v~~~-----~p~~~~~Lp~~ 225 (304)
T cd06430 169 MRRKYFKNDMTPVGLRWEEILMPLYKKYKLKITWGDQDLINIIFHH-----NPEMLYVFPCH 225 (304)
T ss_pred HHhhhcccccchhhhhHHHHHHHHHHhcccCCCCCCHHHHHHHHcC-----CCCeEEEcCcc
Confidence 11 233444444333333 36999999999952 12356667654
No 16
>cd06432 GT8_HUGT1_C_like The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family. C-terminal domain of glycoprotein glucosyltransferase (UGT). UGT is a large glycoprotein whose C-terminus contains the catalytic activity. This catalytic C-terminal domain is highly homologous to Glycosyltransferase Family 8 (GT 8) and contains the DXD motif that coordinates donor sugar binding, characteristic for Family 8 glycosyltransferases. GT 8 proteins are retaining enzymes based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. The non-catalytic N-terminal portion of the human UTG1 (HUGT1) has been shown to monitor the protein folding status and activate its glucosyltransferase activity.
Probab=93.06 E-value=0.3 Score=46.56 Aligned_cols=105 Identities=16% Similarity=0.114 Sum_probs=58.3
Q ss_pred HHHHHHHHcCC-cEEEecccEEEccCcccccCC---CCCeEeecCCCC-----CCC---------C-CCCCCCCeeEEEE
Q 018473 174 RLLSDVLAMGY-NFVFTDADIVWLQNPFQRFDP---DADFQIACDRFS-----GNS---------F-NLRNEPNGGFNYV 234 (355)
Q Consensus 174 ~~l~~vL~lGy-~VLfsDvDVVWlRnP~~~f~~---~aDi~is~D~~~-----g~~---------~-d~~~~~NtGf~yv 234 (355)
-++..+|...+ .||+.|+|+|...|=-+.+.- ++=+.+..|.-. +.. . ......|+|++++
T Consensus 86 L~~~~lLP~~vdkvLYLD~Dilv~~dL~eL~~~dl~~~~~Aav~d~~~~~~~~~~~~~~~~~~~~~l~~~~YfNSGVmli 165 (248)
T cd06432 86 LFLDVLFPLNVDKVIFVDADQIVRTDLKELMDMDLKGAPYGYTPFCDSRKEMDGFRFWKQGYWKSHLRGRPYHISALYVV 165 (248)
T ss_pred HHHHHhhhhccCEEEEEcCCceecccHHHHHhcCcCCCeEEEeeccccchhcccchhhhhhhhhhhcCCCCccceeeEEE
Confidence 34444887766 699999999998764444432 221122223211 000 0 1123689999995
Q ss_pred -----EeChhHHHHHHHHHHHHHcCC---CCCchHHHHHHHcCCCCCCCceEEEEecccC
Q 018473 235 -----KSNNRTIEFYKFWYNSRKMFP---GLHDQDVLNEIKFDPYIQKIQQKLLILDLHL 286 (355)
Q Consensus 235 -----R~T~~T~~f~~~W~~~r~~~p---~~~DQ~vfN~ll~~~~~~~~gl~v~~Ld~~~ 286 (355)
|...-+.++.+.- +....++ ..+||+++|.++.+ .++..||..+
T Consensus 166 NL~~wR~~~i~~~~~~~~-~~l~~~~~~l~~~DQDiLN~v~~~-------~~i~~Lp~~w 217 (248)
T cd06432 166 DLKRFRRIAAGDRLRGQY-QQLSQDPNSLANLDQDLPNNMQHQ-------VPIFSLPQEW 217 (248)
T ss_pred eHHHHHHHhHHHHHHHHH-HHHhcCCCccccCCchhhHHHhcc-------CCeEECChHH
Confidence 4544444333222 1122222 35899999999952 2478888665
No 17
>cd06429 GT8_like_1 GT8_like_1 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=90.72 E-value=0.44 Score=45.80 Aligned_cols=81 Identities=19% Similarity=0.178 Sum_probs=50.9
Q ss_pred cEEEecccEEEccCcccccCCCC--CeE-eecCCCCCCCCCCCCCCCeeEEEEE-----eChhHHHHHHHHHHHHH----
Q 018473 185 NFVFTDADIVWLQNPFQRFDPDA--DFQ-IACDRFSGNSFNLRNEPNGGFNYVK-----SNNRTIEFYKFWYNSRK---- 252 (355)
Q Consensus 185 ~VLfsDvDVVWlRnP~~~f~~~a--Di~-is~D~~~g~~~d~~~~~NtGf~yvR-----~T~~T~~f~~~W~~~r~---- 252 (355)
.||+.|+|+|-.+|=-+.+..+- .+. ...| ..|+|++++- .++-+.++++ |.+...
T Consensus 116 kvlYLD~Dviv~~dl~eL~~~dl~~~~~aav~d-----------yfNsGV~linl~~wr~~~i~~~~~~-~~~~~~~~~~ 183 (257)
T cd06429 116 KVIYLDDDVVVQKDLTELWNTDLGGGVAGAVET-----------SWNPGVNVVNLTEWRRQNVTETYEK-WMELNQEEEV 183 (257)
T ss_pred eEEEEeCCEEEeCCHHHHhhCCCCCCEEEEEhh-----------hcccceEEEeHHHHHhccHHHHHHH-HHHHhhhccc
Confidence 69999999999998777764321 122 2222 5899999964 4555555554 333221
Q ss_pred cCCCCCchHHHHHHHcCCCCCCCceEEEEeccc
Q 018473 253 MFPGLHDQDVLNEIKFDPYIQKIQQKLLILDLH 285 (355)
Q Consensus 253 ~~p~~~DQ~vfN~ll~~~~~~~~gl~v~~Ld~~ 285 (355)
......||+++|.++.. ++..||..
T Consensus 184 ~~~~~~dqd~ln~~~~~--------~~~~L~~~ 208 (257)
T cd06429 184 TLWKLITLPPGLIVFYG--------LTSPLDPS 208 (257)
T ss_pred chhhcCCccHHHHHccC--------eeEECChH
Confidence 22455799999988852 56666654
No 18
>PLN02659 Probable galacturonosyltransferase
Probab=60.89 E-value=19 Score=38.26 Aligned_cols=104 Identities=18% Similarity=0.195 Sum_probs=56.5
Q ss_pred cccHHHHHH-HHHHHHHHHHHHHcCCcEEEecccEEEccCcccccCC--CCCeE-eecCC-----CC-----------CC
Q 018473 160 FMTSSYLEM-MWIRIRLLSDVLAMGYNFVFTDADIVWLQNPFQRFDP--DADFQ-IACDR-----FS-----------GN 219 (355)
Q Consensus 160 ~gs~~f~~m-~w~K~~~l~~vL~lGy~VLfsDvDVVWlRnP~~~f~~--~aDi~-is~D~-----~~-----------g~ 219 (355)
+..+.|+.| +..|..+ -+++..==.||+.|.|||-.+|=-+.+.- +..+. ...|+ +. ++
T Consensus 321 ~~~p~ylS~~nY~RL~I-PeLLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkv~AAVeDc~~~d~~~~~~~~~~yL~~s~ 399 (534)
T PLN02659 321 ALSPKYNSVMNHIRIHL-PELFPSLNKVVFLDDDIVVQTDLSPLWDIDMNGKVNGAVETCRGEDKFVMSKKLKSYLNFSH 399 (534)
T ss_pred cCCccceeHHHHHHHHH-HHHhhhcCeEEEeeCCEEEcCchHHHHhCCCCCcEEEEeeccccccchhhhHHHHHhhcccc
Confidence 466777765 4456544 34444212699999999999886665532 11122 22232 10 00
Q ss_pred CC-----C-CCCCCCeeEEE-----EEeChhHHHHHHHHHHHHHcCCCCCchHHHH
Q 018473 220 SF-----N-LRNEPNGGFNY-----VKSNNRTIEFYKFWYNSRKMFPGLHDQDVLN 264 (355)
Q Consensus 220 ~~-----d-~~~~~NtGf~y-----vR~T~~T~~f~~~W~~~r~~~p~~~DQ~vfN 264 (355)
+. + .....|+|+++ +|-.+-|.++++.........-..+||+++|
T Consensus 400 p~i~~yFn~~~cYfNsGVlLINLk~WRe~nITek~l~~l~~n~~~~l~l~DQdaLp 455 (534)
T PLN02659 400 PLIAKNFDPNECAWAYGMNIFDLEAWRKTNISSTYHHWLEENLKSDLSLWQLGTLP 455 (534)
T ss_pred hhhhhccCccccceecceeEeeHHHHHhcChHHHHHHHHHhcccccccccccccch
Confidence 10 0 11257889998 4666666665543322111223568999995
No 19
>PLN02870 Probable galacturonosyltransferase
Probab=53.85 E-value=23 Score=37.61 Aligned_cols=103 Identities=16% Similarity=0.130 Sum_probs=55.3
Q ss_pred ccHHHHHH-HHHHHHHHHHHHHcCCcEEEecccEEEccCcccccCCC--CCeE-eecCCCCC----------------CC
Q 018473 161 MTSSYLEM-MWIRIRLLSDVLAMGYNFVFTDADIVWLQNPFQRFDPD--ADFQ-IACDRFSG----------------NS 220 (355)
Q Consensus 161 gs~~f~~m-~w~K~~~l~~vL~lGy~VLfsDvDVVWlRnP~~~f~~~--aDi~-is~D~~~g----------------~~ 220 (355)
..+.|..+ +..|+.+ -+++..=-.||+.|.|||-.+|--+.+.-+ .-+. ...|+..+ +|
T Consensus 321 ~~p~ylS~lny~Rl~L-PelLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkviaAVeDc~~~~~~~~~~~~~~YfNfs~p 399 (533)
T PLN02870 321 RSPKYISLLNHLRIYL-PELFPNLDKVVFLDDDVVIQRDLSPLWDIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHP 399 (533)
T ss_pred CCccccCHHHHHHHHH-HHHhhhcCeEEEEeCCEEecCcHHHHhhCCCCCceEEEEccccccchhhhhhhhhhhcccccc
Confidence 34555443 3345443 344442127999999999999887776431 1122 22332110 01
Q ss_pred ------CCCCCCCCeeEEE-----EEeChhHHHHHHHHHHHHHcCCCCCchHHHH
Q 018473 221 ------FNLRNEPNGGFNY-----VKSNNRTIEFYKFWYNSRKMFPGLHDQDVLN 264 (355)
Q Consensus 221 ------~d~~~~~NtGf~y-----vR~T~~T~~f~~~W~~~r~~~p~~~DQ~vfN 264 (355)
.......|+|+++ +|-.+-|.++++...+...+.-..+||+++|
T Consensus 400 ~i~~~fd~~~cyfNSGVlLINL~~WRe~nITek~~~~l~~n~~~~l~l~DQdaLp 454 (533)
T PLN02870 400 LIAKNLDPEECAWAYGMNIFDLRAWRKTNIRETYHSWLKENLKSNLTMWKLGTLP 454 (533)
T ss_pred hhhcccCcccceeeccchhccHHHHHHcChHHHHHHHHHhhhhcCceeccccccc
Confidence 0011236799998 5666666655543323222233579999995
No 20
>PLN02867 Probable galacturonosyltransferase
Probab=50.37 E-value=40 Score=35.92 Aligned_cols=105 Identities=18% Similarity=0.190 Sum_probs=57.8
Q ss_pred ccccHHHHHH-HHHHHHHHHHHHHcCCcEEEecccEEEccCcccccCCC---CCeEeecCCC---------------C-C
Q 018473 159 YFMTSSYLEM-MWIRIRLLSDVLAMGYNFVFTDADIVWLQNPFQRFDPD---ADFQIACDRF---------------S-G 218 (355)
Q Consensus 159 ~~gs~~f~~m-~w~K~~~l~~vL~lGy~VLfsDvDVVWlRnP~~~f~~~---aDi~is~D~~---------------~-g 218 (355)
.+.++.|+.+ +..|+.+ -+++..==.||+.|.|||-.+|--+.+.-+ .-+..-.|.+ + +
T Consensus 321 ~~~~pkylS~lnYlRflI-PeLLP~LdKVLYLD~DVVVqgDLseLwdiDL~gkviaAV~D~~c~~~~~~~~~~~~YlNfs 399 (535)
T PLN02867 321 EALSPSCLSLLNHLRIYI-PELFPDLNKIVFLDDDVVVQHDLSSLWELDLNGKVVGAVVDSWCGDNCCPGRKYKDYLNFS 399 (535)
T ss_pred hhcChhhhhHHHHHHHHH-HHHhhccCeEEEecCCEEEcCchHHHHhCcCCCCeEEEEeccccccccccchhhhhhcccc
Confidence 3466777765 4456544 444442126999999999999877776432 1111111211 0 0
Q ss_pred CC------CCCCCCCCeeEEEE-----EeChhHHHHHHHHHHHH-HcCCCCCchHHHHH
Q 018473 219 NS------FNLRNEPNGGFNYV-----KSNNRTIEFYKFWYNSR-KMFPGLHDQDVLNE 265 (355)
Q Consensus 219 ~~------~d~~~~~NtGf~yv-----R~T~~T~~f~~~W~~~r-~~~p~~~DQ~vfN~ 265 (355)
+| .......|+|++++ |-.+-|.++. .|++.. ......+||+++|.
T Consensus 400 np~i~~~~~p~~cYFNSGVmLINL~~WRe~nITek~~-~~Le~n~~~~~~l~dqd~LN~ 457 (535)
T PLN02867 400 HPLISSNLDQERCAWLYGMNVFDLKAWRRTNITEAYH-KWLKLSLNSGLQLWQPGALPP 457 (535)
T ss_pred chhhhccCCCCCcceecceeeeeHHHHHHhcHHHHHH-HHHHhchhcccccccccccch
Confidence 11 00122478999985 4454444443 454422 12235799999996
No 21
>PF11051 Mannosyl_trans3: Mannosyltransferase putative; InterPro: IPR022751 Alpha-mannosyltransferase is responsible for the addition of residues to the outer chain of core N-linked polysaccharides and to O-linked mannotriose. It is implicated in late Golgi modifications [][][]. The proteins matching this entry are conserved in fungi and also found in some phototrophic organisms.; GO: 0006486 protein glycosylation
Probab=46.62 E-value=11 Score=36.33 Aligned_cols=19 Identities=37% Similarity=0.450 Sum_probs=18.1
Q ss_pred cEEEecccEEEccCccccc
Q 018473 185 NFVFTDADIVWLQNPFQRF 203 (355)
Q Consensus 185 ~VLfsDvDVVWlRnP~~~f 203 (355)
+||+.|+|.|-++||-.+|
T Consensus 93 evllLDaD~vpl~~p~~lF 111 (271)
T PF11051_consen 93 EVLLLDADNVPLVDPEKLF 111 (271)
T ss_pred eEEEEcCCcccccCHHHHh
Confidence 5999999999999999988
No 22
>PLN02910 polygalacturonate 4-alpha-galacturonosyltransferase
Probab=43.85 E-value=36 Score=37.02 Aligned_cols=105 Identities=19% Similarity=0.170 Sum_probs=62.0
Q ss_pred cccccHHHHHHH-HHHHHHHHHHHHcCCcEEEecccEEEccCcccccCC---CCCeEeecCCCC-----------CCCC-
Q 018473 158 AYFMTSSYLEMM-WIRIRLLSDVLAMGYNFVFTDADIVWLQNPFQRFDP---DADFQIACDRFS-----------GNSF- 221 (355)
Q Consensus 158 ~~~gs~~f~~m~-w~K~~~l~~vL~lGy~VLfsDvDVVWlRnP~~~f~~---~aDi~is~D~~~-----------g~~~- 221 (355)
..|-.+.|+.+. ..|.. +-+++..=-.||+.|+|||-.+|--+.+.- +.-+.+..|+.. +++.
T Consensus 450 ~k~r~p~ylS~lnY~Rf~-LPelLp~l~KVLYLD~DVVV~gDLseLw~iDL~g~v~AAVedc~~~f~r~~~ylnfs~P~i 528 (657)
T PLN02910 450 LKYRNPKYLSMLNHLRFY-LPEVYPKLEKILFLDDDIVVQKDLTPLWSIDMQGMVNGAVETCKESFHRFDKYLNFSNPKI 528 (657)
T ss_pred cccCCcchhhHHHHHHHH-HHHHhhhcCeEEEEeCCEEecCchHHHHhCCcCCceEEEecccchhhhhhhhhhccCChhh
Confidence 455567776553 34543 445555222699999999999998776642 222222233211 0110
Q ss_pred -----CCCCCCCeeEEEE-----EeChhHHHHHHHHHHHHHcCCCCCchHHHHH
Q 018473 222 -----NLRNEPNGGFNYV-----KSNNRTIEFYKFWYNSRKMFPGLHDQDVLNE 265 (355)
Q Consensus 222 -----d~~~~~NtGf~yv-----R~T~~T~~f~~~W~~~r~~~p~~~DQ~vfN~ 265 (355)
......|+|++++ |-.+-|. .++.|.+. ......|||+++|-
T Consensus 529 ~~yFNs~aCyfNsGVmVIDL~~WRe~nITe-~ye~w~el-n~~~~L~dqgsLPp 580 (657)
T PLN02910 529 SENFDPNACGWAFGMNMFDLKEWRKRNITG-IYHYWQDL-NEDRTLWKLGSLPP 580 (657)
T ss_pred hhccCCCCceeecccEEEeHHHHHHhhHHH-HHHHHHHh-cccccccccCCCCh
Confidence 0112356799984 5666666 88889763 34457899999994
No 23
>PLN02523 galacturonosyltransferase
Probab=43.46 E-value=2.7e+02 Score=30.06 Aligned_cols=101 Identities=20% Similarity=0.298 Sum_probs=57.7
Q ss_pred cccHHHHHH-HHHHHHHHHHHHHcCCcEEEecccEEEccCcccccCCC---CCeEeecCCCC-----------CCCCCCC
Q 018473 160 FMTSSYLEM-MWIRIRLLSDVLAMGYNFVFTDADIVWLQNPFQRFDPD---ADFQIACDRFS-----------GNSFNLR 224 (355)
Q Consensus 160 ~gs~~f~~m-~w~K~~~l~~vL~lGy~VLfsDvDVVWlRnP~~~f~~~---aDi~is~D~~~-----------g~~~d~~ 224 (355)
|-.+.|..+ +..|+. +-+++..=-.||+.|.|||-.+|--+.+.-+ .=+....|++. +++. ..
T Consensus 354 ~~~p~ylS~~ny~Rf~-IPeLLP~ldKVLYLD~DVVVq~DLseLw~iDL~gkv~aAVeDc~~~~~r~~~~ln~s~p~-i~ 431 (559)
T PLN02523 354 FRNPKYLSMLNHLRFY-LPEMYPKLHRILFLDDDVVVQKDLTGLWKIDMDGKVNGAVETCFGSFHRYAQYLNFSHPL-IK 431 (559)
T ss_pred ccCcchhhHHHHHHHH-HHHHhcccCeEEEEeCCEEecCCHHHHHhCcCCCceEEEehhhhhHHHHHHHhhcccchh-hh
Confidence 334455443 334443 4445553236999999999999987776432 11222234321 1110 01
Q ss_pred CCCCe-------eEEE-----EEeChhHHHHHHHHHHHHHcCCCCCchHHHH
Q 018473 225 NEPNG-------GFNY-----VKSNNRTIEFYKFWYNSRKMFPGLHDQDVLN 264 (355)
Q Consensus 225 ~~~Nt-------Gf~y-----vR~T~~T~~f~~~W~~~r~~~p~~~DQ~vfN 264 (355)
..+|+ |+++ +|-.+-|.++ ..|.. .......|||+++|
T Consensus 432 ~yFNs~aC~wnsGVmlINL~~WRe~nITek~-~~w~~-ln~~~~l~DqdaLp 481 (559)
T PLN02523 432 EKFNPKACAWAYGMNIFDLDAWRREKCTEQY-HYWQN-LNENRTLWKLGTLP 481 (559)
T ss_pred hCcCCCcccccCCcEEEeHHHHHHhchHHHH-HHHHH-hccccccccccccc
Confidence 23454 9998 4667777775 67765 33345679999997
No 24
>PLN02718 Probable galacturonosyltransferase
Probab=40.68 E-value=34 Score=36.97 Aligned_cols=93 Identities=15% Similarity=0.102 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHHHcCCcEEEecccEEEccCcccccCC---CCCeEeecCCCCC--------------CC-----CC-CCC
Q 018473 169 MWIRIRLLSDVLAMGYNFVFTDADIVWLQNPFQRFDP---DADFQIACDRFSG--------------NS-----FN-LRN 225 (355)
Q Consensus 169 ~w~K~~~l~~vL~lGy~VLfsDvDVVWlRnP~~~f~~---~aDi~is~D~~~g--------------~~-----~d-~~~ 225 (355)
+..|..+-. ++..=-.||+.|+|||-.+|--+.+.- +.-+.+..|+..+ ++ .+ ...
T Consensus 405 ~y~Rl~ipe-llp~l~KvLYLD~DvVV~~DL~eL~~iDl~~~v~aaVedC~~~~~~~~~~~~~lnfs~p~i~~~fn~~~C 483 (603)
T PLN02718 405 NHARFYLPD-IFPGLNKIVLFDHDVVVQRDLSRLWSLDMKGKVVGAVETCLEGEPSFRSMDTFINFSDPWVAKKFDPKAC 483 (603)
T ss_pred HHHHHHHHH-HhcccCEEEEEECCEEecCCHHHHhcCCCCCcEEEEeccccccccchhhhhhhhhccchhhhcccCCCcc
Confidence 444554433 444222699999999999998777642 2212222333211 00 00 112
Q ss_pred CCCeeEEE-----EEeChhHHHHHHHHHHHHHcCCCCCchHHHH
Q 018473 226 EPNGGFNY-----VKSNNRTIEFYKFWYNSRKMFPGLHDQDVLN 264 (355)
Q Consensus 226 ~~NtGf~y-----vR~T~~T~~f~~~W~~~r~~~p~~~DQ~vfN 264 (355)
..|+|++. +|-.+-|.. +..|+... .....+||+++|
T Consensus 484 yfNsGVlLIDLk~WReenITe~-~~~~l~~n-~~~~l~dqdaLp 525 (603)
T PLN02718 484 TWAFGMNLFDLEEWRRQKLTSV-YHKYLQLG-VKRPLWKAGSLP 525 (603)
T ss_pred ccccceEEEeHHHHHhcChHHH-HHHHHHhc-cCccccCccccc
Confidence 36789998 455655555 55565532 223579999998
No 25
>KOG4748 consensus Subunit of Golgi mannosyltransferase complex [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=39.90 E-value=22 Score=36.14 Aligned_cols=144 Identities=15% Similarity=0.133 Sum_probs=86.5
Q ss_pred HHHhhhcCCcEEEecCCCCCCCccccccccHHHHHHHHHHHHHHHHHHHcCCc---EEEecccEEEccCccc----ccC-
Q 018473 133 LDHCLSTHPHCYALNTSGLDFSGKEAYFMTSSYLEMMWIRIRLLSDVLAMGYN---FVFTDADIVWLQNPFQ----RFD- 204 (355)
Q Consensus 133 ~~~c~~~g~~C~~~~~~~~d~s~~~~~~gs~~f~~m~w~K~~~l~~vL~lGy~---VLfsDvDVVWlRnP~~----~f~- 204 (355)
-++|+.+|..-+...... . ..+ .=....|.|+-+|++.+..=-+ +.+.|.|.+.+ ||-. ++.
T Consensus 132 idYA~rHgy~~~~~~~~~--~----~~~---~e~~~~W~KiP~Ir~tM~kyP~AeWIWWlD~DAlim-n~~lsL~~~ilk 201 (364)
T KOG4748|consen 132 IDYARRHGYEFEYKNATL--D----KRY---HELPGVWAKLPAIRQTMLKYPDAEWIWWLDQDALIM-NPDLSLQDHILK 201 (364)
T ss_pred HHHHHHhCCeEEEEeccc--c----ccc---ccccchhHHhHHHHHHHHHCCCCcEEEEecccchhh-CcccchhHHhcC
Confidence 488999998766544321 1 111 1123478999999998876444 77888888764 3321 111
Q ss_pred ---------CC-CCeEeecCCC--CC-C-------------CCCCCCCCCeeEEEEEeChhHHHHHHHHHHHHHcC--CC
Q 018473 205 ---------PD-ADFQIACDRF--SG-N-------------SFNLRNEPNGGFNYVKSNNRTIEFYKFWYNSRKMF--PG 256 (355)
Q Consensus 205 ---------~~-aDi~is~D~~--~g-~-------------~~d~~~~~NtGf~yvR~T~~T~~f~~~W~~~r~~~--p~ 256 (355)
++ .-.+..-..+ .. + +.| .+..|+|=+++|.++-++.+++.|-+....+ -+
T Consensus 202 ~~~L~~~l~~nd~~~~~~~n~~~~~~~~~~~d~~~~~~~ii~qD-~nG~naGSfLirns~~~~~llD~w~dp~l~~~~~~ 280 (364)
T KOG4748|consen 202 PENLVTHLLRNDQKSINPLNIFRLRPRTPSLDDLEDIAFIIPQD-CNGINAGSFLIRNSEWGRLLLDAWNDPLLYELLWG 280 (364)
T ss_pred HHHHHHhhccccccccccCCccccccccccccchhhhceecccC-CCCccccceEEecCccchhHHHhccCHHHHhhccc
Confidence 11 1111100000 00 0 111 2448999999999999999999997654443 45
Q ss_pred CCchHHHHHHHc-CCCCCCCceEEEEecccCcCCc
Q 018473 257 LHDQDVLNEIKF-DPYIQKIQQKLLILDLHLRTGE 290 (355)
Q Consensus 257 ~~DQ~vfN~ll~-~~~~~~~gl~v~~Ld~~~FgG~ 290 (355)
.+||+++-.++. ||.+ -=.+.+|+..++.-|
T Consensus 281 ~~Eq~al~~~~e~h~~l---~~~vgilp~r~ins~ 312 (364)
T KOG4748|consen 281 QKEQDALGHFLENHPQL---HSHVGILPLRYINSY 312 (364)
T ss_pred hHHHHHHHHHHhhchhh---hhheeeccHHHHhcC
Confidence 799999988775 3322 236778887776433
No 26
>cd08579 GDPD_memb_like Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial glycerophosphodiester phosphodiesterases. In addition to a C-terminal GDPD domain, most members in this family have an N-terminus that functions as a membrane anchor.
Probab=39.56 E-value=2.9e+02 Score=25.03 Aligned_cols=69 Identities=16% Similarity=0.292 Sum_probs=42.4
Q ss_pred CCCchHHHHHHHhhcCCCeEEEEEccccccCCCchHHHHHHHhhhccCCcccCCcEEEEEeChHHHHHhhhcCC
Q 018473 68 SNDPSLEKILKRAAMGDNTVIITTLNQAWAEPNSIFDIFLESFRTGNGTGKLLDHLVVVALDSKALDHCLSTHP 141 (355)
Q Consensus 68 ~~~~~L~~lL~~~A~~d~tVIlT~~N~ay~~p~s~lDlfLes~~~g~~t~~l~~nllVvAlD~~a~~~c~~~g~ 141 (355)
...+.|+++|......+-.+.+=.=.... .+..+.+.++.-+.. ....++++|.+.|.+..+.+++..+
T Consensus 80 ~~iptL~evl~~~~~~~~~l~iEiK~~~~-~~~~~~~~v~~~l~~----~~~~~~v~v~Sf~~~~l~~~~~~~p 148 (220)
T cd08579 80 AKIPSLDEYLALAKGLKQKLLIELKPHGH-DSPDLVEKFVKLYKQ----NLIENQHQVHSLDYRVIEKVKKLDP 148 (220)
T ss_pred CcCCCHHHHHHHhhccCCeEEEEECCCCC-CCHHHHHHHHHHHHH----cCCCcCeEEEeCCHHHHHHHHHHCC
Confidence 45789999999886432234443322221 122344444444432 1235789999999999999988764
No 27
>PLN02742 Probable galacturonosyltransferase
Probab=38.92 E-value=83 Score=33.64 Aligned_cols=101 Identities=19% Similarity=0.234 Sum_probs=59.3
Q ss_pred HHHHHH-HHHHHHHHHHHHHcCCcEEEecccEEEccCcccccCC---CCCeEeecCC------CC-----CCC-----CC
Q 018473 163 SSYLEM-MWIRIRLLSDVLAMGYNFVFTDADIVWLQNPFQRFDP---DADFQIACDR------FS-----GNS-----FN 222 (355)
Q Consensus 163 ~~f~~m-~w~K~~~l~~vL~lGy~VLfsDvDVVWlRnP~~~f~~---~aDi~is~D~------~~-----g~~-----~d 222 (355)
+.|..+ +..|..+ -+++..=-.||+.|+|||-.+|--+.+.- +.=+....|+ +. .+| .+
T Consensus 333 p~y~s~~~y~R~~l-P~llp~l~KvlYLD~DvVV~~DL~eL~~~DL~~~viaAVedC~~~f~ry~~yLnfS~p~i~~~f~ 411 (534)
T PLN02742 333 PKYLSMLNHLRFYI-PEIYPALEKVVFLDDDVVVQKDLTPLFSIDLHGNVNGAVETCLETFHRYHKYLNFSHPLISSHFD 411 (534)
T ss_pred cccccHHHHHHHHH-HHHhhccCeEEEEeCCEEecCChHHHhcCCCCCCEEEEeCchhhhhhhhhhhhcccchhhhccCC
Confidence 444333 3445444 34554322799999999999998777643 2212223343 11 011 01
Q ss_pred -CCCCCCeeEEE-----EEeChhHHHHHHHHHHHHHcCCCCCchHHHHHH
Q 018473 223 -LRNEPNGGFNY-----VKSNNRTIEFYKFWYNSRKMFPGLHDQDVLNEI 266 (355)
Q Consensus 223 -~~~~~NtGf~y-----vR~T~~T~~f~~~W~~~r~~~p~~~DQ~vfN~l 266 (355)
.....|+|++. +|-.+-|. .++.|.+ .......+||+++|-.
T Consensus 412 ~~aC~fNsGV~ViDL~~WRe~nITe-~~~~w~e-~n~~~~l~d~gaLpp~ 459 (534)
T PLN02742 412 PDACGWAFGMNVFDLVAWRKANVTA-IYHYWQE-QNVDRTLWKLGTLPPG 459 (534)
T ss_pred CCccccccCcEEEeHHHHHhhcHHH-HHHHHHH-hccccccccccccchH
Confidence 11346899998 46666666 7778876 3344568999999964
No 28
>PLN02829 Probable galacturonosyltransferase
Probab=38.90 E-value=62 Score=35.18 Aligned_cols=105 Identities=17% Similarity=0.108 Sum_probs=60.7
Q ss_pred ccccHHHHHH-HHHHHHHHHHHHHcCC-cEEEecccEEEccCcccccCC---CCCeEeecCCCC-----------CCC--
Q 018473 159 YFMTSSYLEM-MWIRIRLLSDVLAMGY-NFVFTDADIVWLQNPFQRFDP---DADFQIACDRFS-----------GNS-- 220 (355)
Q Consensus 159 ~~gs~~f~~m-~w~K~~~l~~vL~lGy-~VLfsDvDVVWlRnP~~~f~~---~aDi~is~D~~~-----------g~~-- 220 (355)
.|..+.|..+ +..|.. +-+++. .+ .||+.|.|||-.+|--+.+.- +.-+....|+.. .++
T Consensus 433 k~r~p~ylS~lnY~Rfy-LPeLLP-~LdKVLYLD~DVVVqgDLseLw~iDL~gkviAAVedc~~~f~r~~~~l~fs~p~i 510 (639)
T PLN02829 433 KYRNPKYLSILNHLRFY-LPEIFP-KLNKVLFLDDDIVVQKDLTGLWSIDLKGNVNGAVETCGESFHRFDRYLNFSNPLI 510 (639)
T ss_pred ccCCcchhhHHHHHHHH-HHHHhc-ccCeEEEEeCCEEeCCChHHHHhCCCCCceEEEeccchhhhhhhhhhhhccchHh
Confidence 4555555443 334543 444555 34 699999999999987777642 222222233211 011
Q ss_pred ----CCCCCCCCeeEEEE-----EeChhHHHHHHHHHHHHHcCCCCCchHHHHHHH
Q 018473 221 ----FNLRNEPNGGFNYV-----KSNNRTIEFYKFWYNSRKMFPGLHDQDVLNEIK 267 (355)
Q Consensus 221 ----~d~~~~~NtGf~yv-----R~T~~T~~f~~~W~~~r~~~p~~~DQ~vfN~ll 267 (355)
.......|+|++++ |-.+-|..+. .|+.. ......|||+++|-.+
T Consensus 511 ~~~Fn~~~CyFNSGVmVINL~~WRe~nITe~y~-~wm~~-n~~r~L~dlgaLPp~L 564 (639)
T PLN02829 511 SKNFDPHACGWAYGMNVFDLDEWKRQNITEVYH-SWQKL-NHDRQLWKLGTLPPGL 564 (639)
T ss_pred hhccCCcccceecceEEEeHHHHHHhChHHHHH-HHHHH-ccCCccccccCCChHH
Confidence 00123478999984 6666666655 77653 2344679999999754
No 29
>COG1512 Beta-propeller domains of methanol dehydrogenase type [General function prediction only]
Probab=38.75 E-value=1.7e+02 Score=28.61 Aligned_cols=62 Identities=15% Similarity=0.229 Sum_probs=32.9
Q ss_pred cCCCCCchHHHHHHHhhcCC--CeEEEEEc-cccccCCCch-HHHHHHHhhhccCCcccCC-cEEEEEeCh
Q 018473 65 QKSSNDPSLEKILKRAAMGD--NTVIITTL-NQAWAEPNSI-FDIFLESFRTGNGTGKLLD-HLVVVALDS 130 (355)
Q Consensus 65 ~~~~~~~~L~~lL~~~A~~d--~tVIlT~~-N~ay~~p~s~-lDlfLes~~~g~~t~~l~~-nllVvAlD~ 130 (355)
....+...|++-|+.-+.+. ..++||+= +.... .... .+ +.+.|+.|+.. .-+ =++|||+|+
T Consensus 43 Ls~~e~~~Leq~l~~L~~kt~~QiaVv~vpSt~g~~-IE~ya~r-lfd~W~lG~k~--~~dGvLLlVa~~d 109 (271)
T COG1512 43 LSAAERGALEQQLADLEQKTGAQIAVVTVPSTGGET-IEQYATR-LFDKWKLGDKA--QDDGVLLLVAMND 109 (271)
T ss_pred CChhhHHHHHHHHHHHHhccCCeEEEEEecCCCCCC-HHHHHHH-HHHhcCCCccc--cCCCEEEEEEcCC
Confidence 34456778999999888654 23333332 22211 0000 34 45567776322 222 377888887
No 30
>PF02484 Rhabdo_NV: Rhabdovirus Non-virion protein; InterPro: IPR003490 Infectious hematopoietic necrosis virus (IHNV) is a member of the family Rhabdoviridae. The non-virion protein (NV) is coded for by one of the six genes of the IHNV genome [], but is absent in vesiculovirus-like rhabdovirus [].
Probab=28.79 E-value=70 Score=26.35 Aligned_cols=27 Identities=33% Similarity=0.512 Sum_probs=19.4
Q ss_pred HHHHHHHHHHcCCcEEEecccEEEccC
Q 018473 172 RIRLLSDVLAMGYNFVFTDADIVWLQN 198 (355)
Q Consensus 172 K~~~l~~vL~lGy~VLfsDvDVVWlRn 198 (355)
|-.+-..+--.|+.++|-|.|+||-.+
T Consensus 14 ~~~lryk~~va~hgflfddg~~vw~e~ 40 (111)
T PF02484_consen 14 RDALRYKNEVARHGFLFDDGDIVWSED 40 (111)
T ss_pred HHHHHHHhhccccceEecCCcEEEecC
Confidence 333334444579999999999999654
No 31
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=26.11 E-value=41 Score=31.93 Aligned_cols=31 Identities=23% Similarity=0.280 Sum_probs=20.3
Q ss_pred hhhhcc-CCCccccchHHHHHHHHHHHHHhhhhhccce
Q 018473 309 LKNAER-HPFILLTSRLTVFRLLRRRLVLKRAIINDTC 345 (355)
Q Consensus 309 l~dw~~-y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (355)
|.+-.. ++|.-|--+ .|.|.|+|||++++.=
T Consensus 131 l~~~~~~~~p~eLSGG------qqQRVAIARAL~~~P~ 162 (226)
T COG1136 131 LEDRLLKKKPSELSGG------QQQRVAIARALINNPK 162 (226)
T ss_pred ChhhhccCCchhcCHH------HHHHHHHHHHHhcCCC
Confidence 443333 455544433 5889999999999753
No 32
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=24.33 E-value=43 Score=36.91 Aligned_cols=34 Identities=15% Similarity=0.125 Sum_probs=25.3
Q ss_pred cCCCcccc----chHHHHHHHHHHHHHhhhhhccceee
Q 018473 314 RHPFILLT----SRLTVFRLLRRRLVLKRAIINDTCFR 347 (355)
Q Consensus 314 ~y~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (355)
++|.-+=| -+...+-==|.|+|||||++.+.|.=
T Consensus 589 ~~p~gY~T~VGEkG~qLSGGQKQRIAIARALlr~P~VL 626 (716)
T KOG0058|consen 589 NFPDGYNTVVGEKGSQLSGGQKQRIAIARALLRNPRVL 626 (716)
T ss_pred hCccccccccCCccccccchHHHHHHHHHHHhcCCCEE
Confidence 34666666 44455556799999999999998863
No 33
>PLN02331 phosphoribosylglycinamide formyltransferase
Probab=22.70 E-value=6.2e+02 Score=23.47 Aligned_cols=43 Identities=16% Similarity=0.131 Sum_probs=28.4
Q ss_pred chHHHHHHHhhhccCCccc-CCcEEEEEeC--hHHHHHhhhcCCcEEEec
Q 018473 101 SIFDIFLESFRTGNGTGKL-LDHLVVVALD--SKALDHCLSTHPHCYALN 147 (355)
Q Consensus 101 s~lDlfLes~~~g~~t~~l-~~nllVvAlD--~~a~~~c~~~g~~C~~~~ 147 (355)
+-+...++.++.| .+ ..-.+|++-. ..+.++|++.|+|++..+
T Consensus 11 sn~~al~~~~~~~----~l~~~i~~visn~~~~~~~~~A~~~gIp~~~~~ 56 (207)
T PLN02331 11 SNFRAIHDACLDG----RVNGDVVVVVTNKPGCGGAEYARENGIPVLVYP 56 (207)
T ss_pred hhHHHHHHHHHcC----CCCeEEEEEEEeCCCChHHHHHHHhCCCEEEec
Confidence 3456677777654 22 3445566653 445799999999998765
No 34
>PRK05647 purN phosphoribosylglycinamide formyltransferase; Reviewed
Probab=22.64 E-value=6e+02 Score=23.28 Aligned_cols=54 Identities=15% Similarity=0.310 Sum_probs=33.4
Q ss_pred CeEEEEEccccccCCCchHHHHHHHhhhccCCccc-CCcEEEEEe--ChHHHHHhhhcCCcEEEecC
Q 018473 85 NTVIITTLNQAWAEPNSIFDIFLESFRTGNGTGKL-LDHLVVVAL--DSKALDHCLSTHPHCYALNT 148 (355)
Q Consensus 85 ~tVIlT~~N~ay~~p~s~lDlfLes~~~g~~t~~l-~~nllVvAl--D~~a~~~c~~~g~~C~~~~~ 148 (355)
|.+|++..|.. ++..+++.+..+ .+ ..-.+|++- |..+.++|++.|+||+..+.
T Consensus 3 ki~vl~sg~gs------~~~~ll~~~~~~----~~~~~I~~vvs~~~~~~~~~~a~~~gIp~~~~~~ 59 (200)
T PRK05647 3 RIVVLASGNGS------NLQAIIDACAAG----QLPAEIVAVISDRPDAYGLERAEAAGIPTFVLDH 59 (200)
T ss_pred eEEEEEcCCCh------hHHHHHHHHHcC----CCCcEEEEEEecCccchHHHHHHHcCCCEEEECc
Confidence 45566665544 466677777653 22 233334444 34577899999999988653
No 35
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=21.69 E-value=53 Score=35.18 Aligned_cols=33 Identities=27% Similarity=0.205 Sum_probs=24.5
Q ss_pred ccCCCccccchHHHHHHHHHHHHHhhhhhccce
Q 018473 313 ERHPFILLTSRLTVFRLLRRRLVLKRAIINDTC 345 (355)
Q Consensus 313 ~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (355)
+-|-.|+=-.+...+-=+|+||||||++.+|+-
T Consensus 462 ~gl~t~lge~G~~LSGGE~rRLAlAR~LL~dap 494 (573)
T COG4987 462 DGLNTWLGEGGRRLSGGERRRLALARALLHDAP 494 (573)
T ss_pred hhhhchhccCCCcCCchHHHHHHHHHHHHcCCC
Confidence 334444444677777789999999999999864
Done!