Query 018474
Match_columns 355
No_of_seqs 192 out of 2186
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 15:50:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018474.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018474hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2fp8_A Strictosidine synthase; 100.0 5.5E-32 1.9E-36 247.9 29.4 277 43-349 9-315 (322)
2 3sre_A PON1, serum paraoxonase 100.0 1.6E-28 5.4E-33 225.8 29.4 273 41-345 40-355 (355)
3 3dr2_A Exported gluconolactona 100.0 5.3E-26 1.8E-30 206.5 31.2 253 42-346 36-305 (305)
4 3e5z_A Putative gluconolactona 99.9 2.2E-24 7.4E-29 194.5 31.4 256 43-351 20-290 (296)
5 3g4e_A Regucalcin; six bladed 99.9 3.7E-23 1.3E-27 187.0 29.4 239 48-336 9-262 (297)
6 1pjx_A Dfpase, DIISOPROPYLFLUO 99.9 1.1E-22 3.8E-27 184.1 27.5 259 44-348 11-300 (314)
7 4hw6_A Hypothetical protein, I 99.9 4.5E-21 1.5E-25 182.3 30.5 241 50-346 137-432 (433)
8 2p4o_A Hypothetical protein; p 99.9 9.1E-21 3.1E-25 172.1 30.6 229 44-337 26-279 (306)
9 2ghs_A AGR_C_1268P; regucalcin 99.9 1.9E-20 6.4E-25 171.6 30.4 239 43-338 40-294 (326)
10 1q7f_A NHL, brain tumor CG1071 99.9 2.7E-20 9.1E-25 166.6 29.8 241 48-350 26-283 (286)
11 2dg1_A DRP35, lactonase; beta 99.9 1.6E-20 5.5E-25 171.6 27.5 248 50-348 43-317 (333)
12 3tc9_A Hypothetical hydrolase; 99.9 2E-20 6.7E-25 177.9 28.8 241 50-346 135-429 (430)
13 1rwi_B Serine/threonine-protei 99.9 2.2E-20 7.5E-25 165.4 25.1 235 53-350 25-267 (270)
14 2z2n_A Virginiamycin B lyase; 99.9 7.4E-19 2.5E-23 157.3 31.0 230 51-346 14-254 (299)
15 2qc5_A Streptogramin B lactona 99.9 7.6E-19 2.6E-23 157.3 31.0 231 51-347 19-260 (300)
16 2qc5_A Streptogramin B lactona 99.9 5.4E-19 1.8E-23 158.3 29.1 228 51-346 61-299 (300)
17 2z2n_A Virginiamycin B lyase; 99.9 7.7E-19 2.6E-23 157.2 30.0 231 51-348 56-296 (299)
18 3hrp_A Uncharacterized protein 99.8 8.7E-18 3E-22 158.7 33.6 235 50-346 129-409 (409)
19 3fvz_A Peptidyl-glycine alpha- 99.8 1.8E-18 6.3E-23 158.4 26.3 242 50-350 22-325 (329)
20 2qe8_A Uncharacterized protein 99.8 3.6E-18 1.2E-22 157.4 24.8 237 44-340 10-314 (343)
21 3kya_A Putative phosphatase; s 99.8 1.4E-17 5E-22 158.7 26.7 246 48-349 135-477 (496)
22 1npe_A Nidogen, entactin; glyc 99.8 3.3E-17 1.1E-21 145.4 25.5 204 51-311 35-247 (267)
23 3v64_C Agrin; beta propeller, 99.8 1.2E-16 4.2E-21 147.6 29.1 228 54-344 36-272 (349)
24 3v64_C Agrin; beta propeller, 99.8 3.2E-17 1.1E-21 151.5 24.7 184 51-255 72-264 (349)
25 3dsm_A Uncharacterized protein 99.8 6.8E-17 2.3E-21 148.0 26.2 213 51-311 83-310 (328)
26 4a2l_A BT_4663, two-component 99.8 5.7E-17 1.9E-21 165.7 26.7 225 54-347 359-614 (795)
27 3v65_B Low-density lipoprotein 99.8 8.4E-17 2.9E-21 150.7 25.3 184 51-255 115-307 (386)
28 3v65_B Low-density lipoprotein 99.8 2.1E-16 7.4E-21 148.0 27.9 229 54-345 79-316 (386)
29 1ijq_A LDL receptor, low-densi 99.8 1.5E-16 5.1E-21 145.0 25.3 184 51-255 29-227 (316)
30 1npe_A Nidogen, entactin; glyc 99.8 6.3E-16 2.2E-20 137.1 27.9 220 65-347 3-238 (267)
31 1ijq_A LDL receptor, low-densi 99.8 7.9E-16 2.7E-20 140.2 29.0 222 65-346 3-237 (316)
32 3vgz_A Uncharacterized protein 99.8 1.9E-15 6.6E-20 138.2 30.3 239 52-348 41-304 (353)
33 1rwi_B Serine/threonine-protei 99.7 2.6E-16 8.9E-21 139.0 22.5 184 49-255 64-253 (270)
34 4a2l_A BT_4663, two-component 99.7 4.7E-16 1.6E-20 158.9 27.5 224 54-348 408-660 (795)
35 3v9f_A Two-component system se 99.7 2.5E-16 8.6E-21 160.6 25.5 231 54-347 315-568 (781)
36 3v9f_A Two-component system se 99.7 2.7E-16 9.2E-21 160.3 24.9 225 54-347 409-656 (781)
37 3sov_A LRP-6, low-density lipo 99.7 4.5E-16 1.5E-20 141.9 23.1 184 51-255 34-227 (318)
38 4a0p_A LRP6, LRP-6, low-densit 99.7 1E-15 3.4E-20 151.8 26.0 189 45-255 30-226 (628)
39 3dsm_A Uncharacterized protein 99.7 1.6E-15 5.5E-20 138.8 24.8 231 52-347 44-302 (328)
40 3p5b_L Low density lipoprotein 99.7 6.2E-15 2.1E-19 138.7 27.9 223 63-345 83-318 (400)
41 1q7f_A NHL, brain tumor CG1071 99.7 1.3E-15 4.5E-20 135.9 22.2 182 50-254 75-269 (286)
42 3sov_A LRP-6, low-density lipo 99.7 7.3E-15 2.5E-19 133.8 25.0 220 65-346 6-237 (318)
43 3p5b_L Low density lipoprotein 99.7 3.2E-15 1.1E-19 140.6 23.2 184 51-255 111-309 (400)
44 3hxj_A Pyrrolo-quinoline quino 99.7 1.2E-14 4.1E-19 131.9 26.2 218 63-351 107-328 (330)
45 2fp8_A Strictosidine synthase; 99.7 1.1E-15 3.9E-20 139.3 19.0 180 52-255 80-302 (322)
46 3a9g_A Putative uncharacterize 99.7 1.4E-14 4.6E-19 134.0 26.5 256 43-347 21-352 (354)
47 3e5z_A Putative gluconolactona 99.7 8.6E-15 2.9E-19 131.4 23.8 178 51-255 68-277 (296)
48 3m0c_C LDL receptor, low-densi 99.7 2.2E-14 7.4E-19 145.2 28.7 229 56-345 389-630 (791)
49 2p9w_A MAL S 1 allergenic prot 99.7 1.9E-14 6.4E-19 129.4 23.9 186 51-255 12-254 (334)
50 3s94_A LRP-6, low-density lipo 99.7 3.2E-14 1.1E-18 140.9 26.6 186 49-255 346-540 (619)
51 3hrp_A Uncharacterized protein 99.7 1.8E-14 6.3E-19 135.9 23.7 181 51-255 171-399 (409)
52 3hfq_A Uncharacterized protein 99.7 4.5E-14 1.5E-18 129.4 25.4 242 51-351 39-321 (347)
53 3s94_A LRP-6, low-density lipo 99.7 1E-14 3.5E-19 144.4 22.3 187 49-256 37-233 (619)
54 2ism_A Putative oxidoreductase 99.7 3.2E-14 1.1E-18 131.5 23.9 202 43-255 23-286 (352)
55 3fvz_A Peptidyl-glycine alpha- 99.6 1.2E-14 4E-19 133.0 19.5 198 93-347 24-277 (329)
56 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 2.5E-14 8.6E-19 128.9 21.5 180 52-255 71-288 (314)
57 3ott_A Two-component system se 99.6 4.8E-14 1.6E-18 143.2 26.0 226 54-349 375-628 (758)
58 3ott_A Two-component system se 99.6 2.1E-14 7.1E-19 145.9 23.0 225 55-347 327-586 (758)
59 3m0c_C LDL receptor, low-densi 99.6 1.1E-13 3.7E-18 140.1 26.3 184 51-255 423-621 (791)
60 4a0p_A LRP6, LRP-6, low-densit 99.6 8E-14 2.7E-18 138.1 24.5 190 46-255 334-538 (628)
61 1n7d_A LDL receptor, low-densi 99.6 3.3E-15 1.1E-19 150.0 14.3 185 50-255 404-603 (699)
62 3u4y_A Uncharacterized protein 99.6 1.5E-12 5.3E-17 118.0 30.6 242 51-349 40-306 (331)
63 3g4e_A Regucalcin; six bladed 99.6 7.4E-14 2.5E-18 125.7 18.9 180 52-256 54-263 (297)
64 3vgz_A Uncharacterized protein 99.6 3.4E-12 1.2E-16 116.4 30.2 220 52-336 89-334 (353)
65 1n7d_A LDL receptor, low-densi 99.6 3.7E-14 1.3E-18 142.4 17.2 224 63-346 377-613 (699)
66 2dg1_A DRP35, lactonase; beta 99.6 3.3E-13 1.1E-17 122.8 20.5 181 52-255 87-300 (333)
67 1l0q_A Surface layer protein; 99.6 1.9E-11 6.5E-16 113.4 32.3 234 52-347 32-275 (391)
68 3dr2_A Exported gluconolactona 99.5 4.5E-13 1.5E-17 121.0 20.3 180 52-255 86-297 (305)
69 3hxj_A Pyrrolo-quinoline quino 99.5 3.8E-13 1.3E-17 122.0 19.8 215 55-345 63-282 (330)
70 3hfq_A Uncharacterized protein 99.5 6.1E-12 2.1E-16 115.1 27.2 188 51-255 85-306 (347)
71 3u4y_A Uncharacterized protein 99.5 1E-11 3.5E-16 112.5 27.2 229 62-347 8-252 (331)
72 4hw6_A Hypothetical protein, I 99.5 1.7E-12 5.8E-17 123.2 21.6 201 94-346 140-373 (433)
73 3no2_A Uncharacterized protein 99.5 1.9E-11 6.4E-16 109.0 26.9 214 62-335 4-231 (276)
74 1jof_A Carboxy-CIS,CIS-muconat 99.5 2.3E-11 8E-16 112.5 27.1 258 39-348 27-342 (365)
75 2ghs_A AGR_C_1268P; regucalcin 99.5 2.2E-12 7.5E-17 117.7 19.2 178 52-256 90-293 (326)
76 3scy_A Hypothetical bacterial 99.5 3E-11 1E-15 111.1 26.8 242 51-350 49-340 (361)
77 3das_A Putative oxidoreductase 99.5 4.8E-11 1.7E-15 109.1 27.6 207 39-255 20-281 (347)
78 3kya_A Putative phosphatase; s 99.5 6.9E-12 2.4E-16 119.6 22.1 182 50-255 184-464 (496)
79 2p4o_A Hypothetical protein; p 99.5 6.6E-12 2.2E-16 113.5 20.9 193 93-347 32-242 (306)
80 2qe8_A Uncharacterized protein 99.5 5.4E-12 1.8E-16 115.9 20.5 182 49-255 64-310 (343)
81 3tc9_A Hypothetical hydrolase; 99.5 3.2E-12 1.1E-16 121.2 19.4 199 94-346 138-370 (430)
82 1ri6_A Putative isomerase YBHE 99.4 2.4E-10 8.1E-15 103.4 30.1 182 52-253 84-295 (343)
83 1pby_B Quinohemoprotein amine 99.4 1.3E-10 4.5E-15 104.9 26.9 227 53-348 35-311 (337)
84 2iwa_A Glutamine cyclotransfer 99.4 1.7E-11 5.9E-16 107.9 19.9 198 94-349 22-239 (266)
85 1ri6_A Putative isomerase YBHE 99.4 1.7E-10 5.8E-15 104.4 27.2 239 51-349 37-310 (343)
86 2ism_A Putative oxidoreductase 99.4 3.1E-11 1.1E-15 111.4 22.1 215 84-348 22-298 (352)
87 2g8s_A Glucose/sorbosone dehyd 99.4 2.6E-11 9.1E-16 111.9 21.4 161 44-212 11-219 (353)
88 3a9g_A Putative uncharacterize 99.4 4.5E-11 1.5E-15 110.4 22.4 200 51-254 72-330 (354)
89 2iwa_A Glutamine cyclotransfer 99.4 5.1E-11 1.7E-15 104.9 19.3 187 43-255 12-226 (266)
90 3no2_A Uncharacterized protein 99.4 4.9E-10 1.7E-14 99.7 25.6 220 52-325 37-273 (276)
91 1l0q_A Surface layer protein; 99.4 2E-09 6.7E-14 99.7 30.3 219 65-347 3-233 (391)
92 1nir_A Nitrite reductase; hemo 99.3 1.4E-09 4.9E-14 106.0 30.4 232 58-347 144-402 (543)
93 3bws_A Protein LP49; two-domai 99.3 1.8E-09 6.2E-14 101.4 29.4 251 53-347 171-432 (433)
94 3bws_A Protein LP49; two-domai 99.3 4.5E-10 1.5E-14 105.5 25.0 232 52-347 123-390 (433)
95 1nir_A Nitrite reductase; hemo 99.3 8.5E-10 2.9E-14 107.7 26.1 238 53-351 180-462 (543)
96 3qqz_A Putative uncharacterize 99.3 1E-09 3.5E-14 96.0 23.8 188 49-255 24-243 (255)
97 3scy_A Hypothetical bacterial 99.3 1.3E-09 4.5E-14 100.0 25.5 181 52-254 100-325 (361)
98 1pby_B Quinohemoprotein amine 99.3 1.6E-09 5.6E-14 97.6 24.5 213 53-313 83-321 (337)
99 1jof_A Carboxy-CIS,CIS-muconat 99.3 4.8E-09 1.7E-13 96.8 27.8 184 65-254 4-212 (365)
100 3nol_A Glutamine cyclotransfer 99.3 1.3E-09 4.5E-14 94.9 22.0 194 96-349 46-258 (262)
101 3das_A Putative oxidoreductase 99.3 3.7E-09 1.2E-13 96.6 25.2 208 85-348 24-293 (347)
102 1jmx_B Amine dehydrogenase; ox 99.2 5.2E-09 1.8E-13 94.8 26.3 216 53-314 44-337 (349)
103 2g8s_A Glucose/sorbosone dehyd 99.2 1.5E-09 5.1E-14 100.1 20.9 199 52-254 66-341 (353)
104 3c75_H MADH, methylamine dehyd 99.2 1.1E-08 3.7E-13 96.3 25.4 237 62-349 83-404 (426)
105 1gxr_A ESG1, transducin-like e 99.2 8.2E-08 2.8E-12 86.2 30.4 229 52-345 98-335 (337)
106 4ery_A WD repeat-containing pr 99.2 1.6E-07 5.3E-12 84.2 31.9 244 48-348 20-269 (312)
107 3nol_A Glutamine cyclotransfer 99.2 6.7E-09 2.3E-13 90.5 21.5 146 52-219 87-254 (262)
108 3nok_A Glutaminyl cyclase; bet 99.2 4E-09 1.4E-13 91.9 19.9 192 95-346 57-265 (268)
109 3c75_H MADH, methylamine dehyd 99.2 5E-09 1.7E-13 98.5 21.9 223 44-309 113-409 (426)
110 1qks_A Cytochrome CD1 nitrite 99.2 4.7E-08 1.6E-12 95.6 29.6 227 63-347 166-421 (567)
111 3ow8_A WD repeat-containing pr 99.1 3.1E-07 1.1E-11 83.1 32.9 237 48-346 77-320 (321)
112 1jmx_B Amine dehydrogenase; ox 99.1 1.9E-08 6.3E-13 91.2 23.5 154 56-221 4-175 (349)
113 3mbr_X Glutamine cyclotransfer 99.1 1.7E-08 5.9E-13 87.1 21.7 152 46-219 59-233 (243)
114 3q6k_A 43.2 kDa salivary prote 99.1 1.1E-07 3.8E-12 87.5 27.9 232 43-335 19-342 (381)
115 3nok_A Glutaminyl cyclase; bet 99.1 1.3E-08 4.3E-13 88.8 20.4 145 52-218 96-263 (268)
116 1qks_A Cytochrome CD1 nitrite 99.1 4.2E-08 1.5E-12 95.9 26.6 245 45-348 192-478 (567)
117 2ymu_A WD-40 repeat protein; u 99.1 1.2E-07 4E-12 92.4 29.9 234 49-346 301-538 (577)
118 1cru_A Protein (soluble quinop 99.1 3.8E-09 1.3E-13 100.5 17.5 189 124-338 19-249 (454)
119 1cru_A Protein (soluble quinop 99.1 2.5E-09 8.6E-14 101.8 15.9 166 43-212 19-249 (454)
120 2hqs_A Protein TOLB; TOLB, PAL 99.1 9.9E-08 3.4E-12 89.7 26.5 208 52-314 179-398 (415)
121 2mad_H Methylamine dehydrogena 99.1 7.4E-07 2.5E-11 82.6 31.5 246 45-349 62-352 (373)
122 2ymu_A WD-40 repeat protein; u 99.0 1.9E-07 6.4E-12 90.9 28.6 219 51-333 344-566 (577)
123 3mbr_X Glutamine cyclotransfer 99.0 8.8E-08 3E-12 82.7 22.8 159 132-348 21-180 (243)
124 2hqs_A Protein TOLB; TOLB, PAL 99.0 2.8E-07 9.5E-12 86.6 26.7 162 73-254 159-329 (415)
125 3qqz_A Putative uncharacterize 99.0 3.5E-07 1.2E-11 79.8 24.9 197 93-347 27-253 (255)
126 3sjl_D Methylamine dehydrogena 99.0 2E-07 6.7E-12 86.3 24.0 245 44-348 73-364 (386)
127 3q7m_A Lipoprotein YFGL, BAMB; 99.0 9.2E-07 3.2E-11 81.5 28.8 221 56-347 48-296 (376)
128 2ece_A 462AA long hypothetical 99.0 3.4E-07 1.2E-11 85.7 25.5 193 61-255 93-341 (462)
129 1k8k_C P40, ARP2/3 complex 41 99.0 8.1E-07 2.8E-11 81.0 27.2 236 52-347 9-274 (372)
130 3sre_A PON1, serum paraoxonase 98.9 6E-08 2E-12 88.9 19.3 138 52-208 112-284 (355)
131 2ojh_A Uncharacterized protein 98.9 2.2E-07 7.4E-12 81.5 22.5 164 71-253 20-191 (297)
132 1erj_A Transcriptional repress 98.9 1.7E-06 5.9E-11 80.3 29.5 236 55-350 127-392 (393)
133 3q7m_A Lipoprotein YFGL, BAMB; 98.9 3.1E-07 1E-11 84.8 23.9 215 62-347 102-337 (376)
134 2ojh_A Uncharacterized protein 98.9 3E-07 1E-11 80.6 22.1 180 52-253 42-234 (297)
135 2ece_A 462AA long hypothetical 98.9 4.2E-07 1.4E-11 85.1 23.8 188 51-253 137-399 (462)
136 1fwx_A Nitrous oxide reductase 98.9 8E-08 2.7E-12 92.9 19.5 192 62-255 100-350 (595)
137 2oiz_A Aromatic amine dehydrog 98.9 6.9E-07 2.4E-11 82.3 25.1 247 44-348 45-335 (361)
138 1mda_H Methylamine dehydrogena 98.9 2.2E-07 7.7E-12 85.8 21.5 223 44-311 60-355 (368)
139 2z3z_A Dipeptidyl aminopeptida 98.9 1.2E-06 4E-11 87.7 28.1 252 52-348 82-392 (706)
140 3sjl_D Methylamine dehydrogena 98.9 4E-07 1.4E-11 84.3 22.4 136 61-214 42-212 (386)
141 1got_B GT-beta; complex (GTP-b 98.9 2.9E-06 1E-10 77.1 28.2 227 54-341 100-337 (340)
142 3vl1_A 26S proteasome regulato 98.9 2.2E-06 7.4E-11 79.7 27.5 230 58-347 104-365 (420)
143 4gqb_B Methylosome protein 50; 98.9 1.6E-06 5.5E-11 79.3 26.0 232 54-348 85-332 (344)
144 1r5m_A SIR4-interacting protei 98.9 7.8E-07 2.7E-11 82.4 24.0 182 51-255 149-350 (425)
145 3ow8_A WD repeat-containing pr 98.9 9.6E-06 3.3E-10 73.2 30.6 185 49-255 30-226 (321)
146 1vyh_C Platelet-activating fac 98.9 3E-06 1E-10 79.2 28.1 152 51-221 108-265 (410)
147 2ynn_A Coatomer subunit beta'; 98.9 3.4E-06 1.2E-10 75.4 27.3 236 51-347 13-259 (304)
148 2p9w_A MAL S 1 allergenic prot 98.9 1.5E-07 5E-12 84.7 17.9 161 132-347 13-215 (334)
149 1gxr_A ESG1, transducin-like e 98.8 4.2E-06 1.4E-10 74.9 27.6 181 51-255 51-244 (337)
150 1sq9_A Antiviral protein SKI8; 98.8 2.9E-06 9.8E-11 78.2 26.4 238 52-347 63-395 (397)
151 1r5m_A SIR4-interacting protei 98.8 3.5E-06 1.2E-10 77.9 27.0 230 53-347 110-361 (425)
152 3zwl_B Eukaryotic translation 98.8 4E-06 1.4E-10 76.0 26.8 248 51-347 74-346 (369)
153 4ery_A WD repeat-containing pr 98.8 1.7E-05 5.9E-10 70.6 30.6 154 49-221 63-223 (312)
154 2pm9_A Protein WEB1, protein t 98.8 1.6E-06 5.4E-11 80.4 24.4 241 52-351 68-341 (416)
155 2oiz_A Aromatic amine dehydrog 98.8 1E-06 3.5E-11 81.2 22.6 76 169-248 285-360 (361)
156 2ecf_A Dipeptidyl peptidase IV 98.8 9.4E-07 3.2E-11 88.9 24.2 138 52-209 37-228 (741)
157 4aez_A CDC20, WD repeat-contai 98.8 7E-06 2.4E-10 76.2 28.5 238 52-350 135-383 (401)
158 3zwl_B Eukaryotic translation 98.8 1.2E-05 4.2E-10 72.7 29.4 190 49-255 30-238 (369)
159 2wg3_C Hedgehog-interacting pr 98.8 5.3E-07 1.8E-11 85.8 20.7 164 44-209 7-242 (463)
160 1got_B GT-beta; complex (GTP-b 98.8 3.6E-05 1.2E-09 69.8 31.9 185 48-255 52-246 (340)
161 2mad_H Methylamine dehydrogena 98.8 8.6E-06 2.9E-10 75.4 27.7 137 62-219 31-194 (373)
162 2ecf_A Dipeptidyl peptidase IV 98.8 1E-06 3.5E-11 88.6 23.2 195 54-254 111-355 (741)
163 1vyh_C Platelet-activating fac 98.8 6.9E-06 2.4E-10 76.8 27.2 232 52-345 151-409 (410)
164 1pgu_A Actin interacting prote 98.8 1.9E-05 6.4E-10 77.0 30.8 235 54-347 67-328 (615)
165 3mkq_A Coatomer beta'-subunit; 98.7 9.8E-06 3.4E-10 82.1 29.7 238 49-347 11-259 (814)
166 4h5i_A Guanine nucleotide-exch 98.7 1.9E-06 6.4E-11 79.4 22.2 186 54-256 136-333 (365)
167 3ei3_B DNA damage-binding prot 98.7 3E-06 1E-10 78.0 22.9 188 49-255 71-271 (383)
168 4g56_B MGC81050 protein; prote 98.7 1.4E-06 4.8E-11 79.9 20.5 236 54-352 97-348 (357)
169 3ei3_B DNA damage-binding prot 98.7 5.7E-06 2E-10 76.0 24.3 248 51-347 118-382 (383)
170 1yfq_A Cell cycle arrest prote 98.7 3.3E-06 1.1E-10 76.0 21.9 182 51-255 11-214 (342)
171 3frx_A Guanine nucleotide-bind 98.7 3.5E-05 1.2E-09 69.2 28.7 187 48-255 14-216 (319)
172 3vl1_A 26S proteasome regulato 98.7 3.8E-06 1.3E-10 78.1 22.7 236 53-348 58-323 (420)
173 1mda_H Methylamine dehydrogena 98.7 2E-06 6.7E-11 79.4 20.1 244 63-348 31-347 (368)
174 3s25_A Hypothetical 7-bladed b 98.7 6.6E-06 2.3E-10 73.8 22.9 217 54-350 57-296 (302)
175 4aez_A CDC20, WD repeat-contai 98.7 4.7E-05 1.6E-09 70.6 29.5 227 56-347 98-336 (401)
176 1pgu_A Actin interacting prote 98.7 1.7E-05 6E-10 77.2 27.6 238 51-347 18-283 (615)
177 2aq5_A Coronin-1A; WD40 repeat 98.7 8.7E-06 3E-10 75.5 24.1 184 51-253 81-285 (402)
178 3odt_A Protein DOA1; ubiquitin 98.7 1.9E-05 6.6E-10 69.8 25.3 231 52-349 60-298 (313)
179 3frx_A Guanine nucleotide-bind 98.6 4.4E-05 1.5E-09 68.5 27.7 184 49-255 63-257 (319)
180 4a9v_A PHOX; hydrolase, beta-p 98.6 1.4E-07 4.7E-12 90.4 11.2 73 131-209 475-550 (592)
181 4g56_B MGC81050 protein; prote 98.6 2E-06 6.7E-11 79.0 18.7 181 53-252 44-244 (357)
182 4e54_B DNA damage-binding prot 98.6 2.7E-06 9.1E-11 80.1 19.6 184 53-255 121-316 (435)
183 4a11_B DNA excision repair pro 98.6 7.5E-05 2.6E-09 68.5 29.0 240 51-350 99-368 (408)
184 2vdu_B TRNA (guanine-N(7)-)-me 98.6 3.7E-05 1.3E-09 72.5 27.3 193 95-345 105-337 (450)
185 3odt_A Protein DOA1; ubiquitin 98.6 4.5E-05 1.5E-09 67.3 26.3 231 49-348 16-256 (313)
186 3pe7_A Oligogalacturonate lyas 98.6 3.7E-05 1.3E-09 70.5 26.5 193 57-253 41-256 (388)
187 2vdu_B TRNA (guanine-N(7)-)-me 98.6 3.4E-05 1.2E-09 72.8 26.4 150 53-222 104-272 (450)
188 3v7d_B Cell division control p 98.6 9.9E-05 3.4E-09 69.5 29.6 176 55-255 126-330 (464)
189 3s25_A Hypothetical 7-bladed b 98.6 1.4E-05 4.8E-10 71.6 22.3 214 62-351 24-259 (302)
190 2ynn_A Coatomer subunit beta'; 98.6 8.2E-05 2.8E-09 66.2 27.2 232 54-347 58-302 (304)
191 1erj_A Transcriptional repress 98.6 0.0001 3.5E-09 68.2 28.8 182 52-255 65-276 (393)
192 3fm0_A Protein CIAO1; WDR39,SG 98.6 8E-05 2.8E-09 67.6 27.6 182 54-255 19-214 (345)
193 2z3z_A Dipeptidyl aminopeptida 98.6 2.4E-05 8.3E-10 78.1 26.1 179 54-253 183-418 (706)
194 2xyi_A Probable histone-bindin 98.6 2.7E-05 9.3E-10 73.1 24.9 185 51-255 128-342 (430)
195 1fwx_A Nitrous oxide reductase 98.6 3.8E-06 1.3E-10 81.2 19.0 185 51-255 133-407 (595)
196 3pe7_A Oligogalacturonate lyas 98.6 3.6E-06 1.2E-10 77.4 18.4 155 56-222 85-274 (388)
197 3azo_A Aminopeptidase; POP fam 98.6 1.5E-05 5.3E-10 78.9 24.1 179 61-254 88-312 (662)
198 1sq9_A Antiviral protein SKI8; 98.6 5.2E-05 1.8E-09 69.6 26.2 245 46-348 11-323 (397)
199 3dm0_A Maltose-binding peripla 98.6 9.4E-05 3.2E-09 73.8 29.9 184 49-255 428-622 (694)
200 2pbi_B Guanine nucleotide-bind 98.6 0.00032 1.1E-08 63.9 31.2 186 48-255 61-260 (354)
201 3mkq_A Coatomer beta'-subunit; 98.6 2.9E-05 1E-09 78.6 26.4 182 52-255 56-248 (814)
202 4h5i_A Guanine nucleotide-exch 98.6 0.00049 1.7E-08 63.1 32.5 238 52-352 74-348 (365)
203 2xzm_R RACK1; ribosome, transl 98.5 0.00015 5.2E-09 65.6 28.3 183 49-253 74-273 (343)
204 3iz6_a 40S ribosomal protein R 98.5 0.00055 1.9E-08 62.9 32.3 260 48-347 63-375 (380)
205 4gqb_B Methylosome protein 50; 98.5 1.2E-05 4.3E-10 73.3 20.5 140 95-254 85-234 (344)
206 2pbi_B Guanine nucleotide-bind 98.5 0.00013 4.3E-09 66.7 26.9 230 52-342 107-352 (354)
207 1xfd_A DIP, dipeptidyl aminope 98.5 1.1E-05 3.6E-10 80.8 21.2 135 53-208 18-191 (723)
208 1nr0_A Actin interacting prote 98.5 5.1E-05 1.8E-09 74.7 25.7 241 51-347 18-270 (611)
209 3sfz_A APAF-1, apoptotic pepti 98.5 8.7E-05 3E-09 79.0 29.1 240 49-347 613-871 (1249)
210 3o4h_A Acylamino-acid-releasin 98.5 1.1E-05 3.8E-10 78.8 20.4 175 54-253 24-212 (582)
211 1yfq_A Cell cycle arrest prote 98.5 3.2E-05 1.1E-09 69.4 21.9 222 51-335 56-312 (342)
212 3dw8_B Serine/threonine-protei 98.5 6.4E-05 2.2E-09 70.2 24.6 184 52-255 29-305 (447)
213 3sfz_A APAF-1, apoptotic pepti 98.5 0.00012 4E-09 78.0 29.3 234 51-346 657-912 (1249)
214 3k26_A Polycomb protein EED; W 98.5 8.2E-05 2.8E-09 67.1 24.5 149 52-221 70-260 (366)
215 3dwl_C Actin-related protein 2 98.5 2.6E-06 9E-11 78.0 14.5 149 53-220 13-176 (377)
216 1nr0_A Actin interacting prote 98.5 0.00035 1.2E-08 68.7 30.6 186 49-255 57-259 (611)
217 3dm0_A Maltose-binding peripla 98.5 6.6E-05 2.2E-09 75.0 25.7 186 49-255 380-581 (694)
218 2aq5_A Coronin-1A; WD40 repeat 98.5 3.1E-05 1E-09 71.8 21.7 185 50-251 130-329 (402)
219 1k8k_C P40, ARP2/3 complex 41 98.5 2.7E-05 9.3E-10 70.7 21.0 181 51-253 52-262 (372)
220 3jrp_A Fusion protein of prote 98.4 0.00018 6E-09 65.3 26.1 186 51-255 11-229 (379)
221 3amr_A 3-phytase; beta-propell 98.4 5.3E-05 1.8E-09 68.6 20.9 187 104-347 39-263 (355)
222 3b7f_A Glycosyl hydrolase, BNR 98.4 2.2E-05 7.6E-10 73.0 19.3 138 59-218 19-205 (394)
223 4gga_A P55CDC, cell division c 98.4 0.00026 8.8E-09 66.0 26.7 236 54-351 150-399 (420)
224 3i2n_A WD repeat-containing pr 98.4 8.7E-05 3E-09 66.8 22.6 183 52-253 66-278 (357)
225 3k26_A Polycomb protein EED; W 98.4 0.00017 5.8E-09 65.0 24.6 158 45-221 12-192 (366)
226 4aow_A Guanine nucleotide-bind 98.4 0.00078 2.7E-08 60.0 28.5 187 48-255 35-235 (340)
227 4aow_A Guanine nucleotide-bind 98.4 0.0011 3.9E-08 58.9 30.1 239 49-347 84-337 (340)
228 3azo_A Aminopeptidase; POP fam 98.4 5.2E-05 1.8E-09 75.1 22.2 153 53-221 131-325 (662)
229 1k32_A Tricorn protease; prote 98.4 0.00016 5.5E-09 75.8 26.6 145 55-209 341-491 (1045)
230 3f3f_A Nucleoporin SEH1; struc 98.3 0.00027 9.4E-09 62.7 24.6 189 46-255 6-238 (351)
231 4ggc_A P55CDC, cell division c 98.3 0.00065 2.2E-08 59.9 26.9 236 54-350 70-318 (318)
232 3o4h_A Acylamino-acid-releasin 98.3 1.1E-05 3.8E-10 78.8 16.4 174 53-255 111-301 (582)
233 3mmy_A MRNA export factor; mRN 98.3 0.00013 4.3E-09 65.9 22.2 100 48-148 36-146 (368)
234 2xzm_R RACK1; ribosome, transl 98.3 0.0012 4.1E-08 59.6 28.8 184 49-255 19-233 (343)
235 4a11_B DNA excision repair pro 98.3 0.00011 3.7E-09 67.4 22.0 157 46-221 38-218 (408)
236 3gre_A Serine/threonine-protei 98.3 0.00044 1.5E-08 64.5 26.4 246 45-348 57-360 (437)
237 2pm9_A Protein WEB1, protein t 98.3 2.4E-05 8.3E-10 72.3 17.1 184 52-255 13-235 (416)
238 2xdw_A Prolyl endopeptidase; a 98.3 0.00077 2.6E-08 67.5 28.7 186 55-255 128-355 (710)
239 3q6k_A 43.2 kDa salivary prote 98.3 0.00024 8.2E-09 65.3 22.7 186 50-255 85-343 (381)
240 3jrp_A Fusion protein of prote 98.3 0.00043 1.5E-08 62.6 24.5 185 52-255 56-276 (379)
241 3c5m_A Oligogalacturonate lyas 98.3 0.00011 3.7E-09 67.3 20.5 193 54-254 38-257 (396)
242 3i2n_A WD repeat-containing pr 98.3 0.00019 6.6E-09 64.4 21.7 188 45-255 12-232 (357)
243 4a5s_A Dipeptidyl peptidase 4 98.3 0.0003 1E-08 70.8 25.2 253 55-347 65-400 (740)
244 2hes_X YDR267CP; beta-propelle 98.3 0.00054 1.9E-08 61.6 24.4 151 52-221 59-230 (330)
245 3lrv_A PRE-mRNA-splicing facto 98.2 0.00031 1E-08 63.5 22.6 172 63-255 48-234 (343)
246 3fm0_A Protein CIAO1; WDR39,SG 98.2 0.0028 9.5E-08 57.3 28.9 153 48-219 58-223 (345)
247 3iz6_a 40S ribosomal protein R 98.2 0.0003 1E-08 64.7 21.9 181 54-255 160-364 (380)
248 1tl2_A L10, protein (tachylect 98.2 3.2E-05 1.1E-09 65.2 13.5 105 41-149 30-152 (236)
249 1w6s_A Methanol dehydrogenase 98.2 0.0019 6.7E-08 63.3 28.4 42 292-335 493-534 (599)
250 2ad6_A Methanol dehydrogenase 98.2 0.0017 5.9E-08 63.3 28.0 43 293-337 485-527 (571)
251 1kb0_A Quinohemoprotein alcoho 98.2 0.0027 9.1E-08 63.3 29.8 53 293-347 498-567 (677)
252 1xfd_A DIP, dipeptidyl aminope 98.2 0.00053 1.8E-08 68.4 24.7 196 53-252 62-323 (723)
253 2ovr_B FBW7, F-BOX/WD repeat p 98.2 0.0048 1.6E-07 57.6 30.0 138 169-348 298-443 (445)
254 3lrv_A PRE-mRNA-splicing facto 98.2 0.0038 1.3E-07 56.2 28.6 171 63-255 94-280 (343)
255 3dwl_C Actin-related protein 2 98.2 0.00014 4.9E-09 66.3 18.6 185 52-256 56-272 (377)
256 3dw8_B Serine/threonine-protei 98.2 0.002 6.9E-08 59.9 26.9 149 52-221 94-315 (447)
257 2ad6_A Methanol dehydrogenase 98.1 0.0031 1.1E-07 61.5 28.8 65 56-123 110-186 (571)
258 2xyi_A Probable histone-bindin 98.1 0.00038 1.3E-08 65.2 21.5 187 51-255 181-399 (430)
259 2hes_X YDR267CP; beta-propelle 98.1 0.0027 9.1E-08 57.0 26.1 147 53-220 16-183 (330)
260 3v7d_B Cell division control p 98.1 0.0033 1.1E-07 58.9 27.5 223 52-338 204-454 (464)
261 2oaj_A Protein SNI1; WD40 repe 98.1 0.00089 3.1E-08 69.1 25.0 184 49-255 15-231 (902)
262 1k32_A Tricorn protease; prote 98.1 8.1E-05 2.8E-09 78.0 17.4 178 53-254 297-491 (1045)
263 3jro_A Fusion protein of prote 98.1 0.00041 1.4E-08 70.0 22.0 188 49-255 7-227 (753)
264 2ovr_B FBW7, F-BOX/WD repeat p 98.1 0.0068 2.3E-07 56.6 29.2 134 169-348 258-392 (445)
265 2gop_A Trilobed protease; beta 98.1 0.00084 2.9E-08 60.3 22.0 178 53-255 60-281 (347)
266 1z68_A Fibroblast activation p 98.0 0.00011 3.6E-09 73.6 16.6 132 54-209 18-188 (719)
267 1kb0_A Quinohemoprotein alcoho 98.0 0.0046 1.6E-07 61.6 27.9 163 56-221 123-346 (677)
268 3c5m_A Oligogalacturonate lyas 98.0 0.00061 2.1E-08 62.2 19.9 179 57-254 86-301 (396)
269 4e54_B DNA damage-binding prot 98.0 0.00074 2.5E-08 63.2 20.5 247 52-347 165-430 (435)
270 3mmy_A MRNA export factor; mRN 98.0 0.00066 2.3E-08 61.0 19.1 200 51-255 86-335 (368)
271 2pm7_B Protein transport prote 98.0 0.005 1.7E-07 54.2 24.5 185 53-255 55-274 (297)
272 2wg3_C Hedgehog-interacting pr 98.0 0.00041 1.4E-08 65.8 18.1 192 52-255 69-355 (463)
273 1z68_A Fibroblast activation p 97.9 0.00025 8.7E-09 70.9 17.3 160 54-218 62-284 (719)
274 2hz6_A Endoplasmic reticulum t 97.9 4.3E-05 1.5E-09 70.4 10.5 141 56-222 4-150 (369)
275 3gre_A Serine/threonine-protei 97.9 0.0012 4E-08 61.5 20.1 151 52-221 112-292 (437)
276 3b7f_A Glycosyl hydrolase, BNR 97.9 0.00077 2.6E-08 62.4 18.2 179 52-254 55-298 (394)
277 2pm7_B Protein transport prote 97.9 0.011 3.9E-07 51.9 28.1 183 52-254 10-226 (297)
278 1p22_A F-BOX/WD-repeat protein 97.9 0.012 4.2E-07 54.7 26.2 219 56-347 138-365 (435)
279 3f3f_A Nucleoporin SEH1; struc 97.9 0.0018 6.3E-08 57.3 19.6 153 51-221 57-249 (351)
280 4a5s_A Dipeptidyl peptidase 4 97.8 0.0019 6.6E-08 64.9 21.6 133 55-208 20-189 (740)
281 1flg_A Protein (quinoprotein e 97.8 0.015 5E-07 56.9 27.0 53 293-347 507-581 (582)
282 3bg1_A Protein SEC13 homolog; 97.8 0.0071 2.4E-07 53.8 22.8 150 52-220 14-197 (316)
283 2j04_A TAU60, YPL007P, hypothe 97.8 0.009 3.1E-07 57.8 23.9 136 95-254 88-243 (588)
284 1p22_A F-BOX/WD-repeat protein 97.7 0.0098 3.3E-07 55.4 23.5 143 53-221 175-325 (435)
285 2j04_B YDR362CP, TAU91; beta p 97.7 0.0011 3.7E-08 64.1 17.1 149 53-221 268-428 (524)
286 4gga_A P55CDC, cell division c 97.7 0.028 9.5E-07 52.0 31.8 233 53-348 107-354 (420)
287 1kv9_A Type II quinohemoprotei 97.7 0.035 1.2E-06 55.1 28.3 54 293-348 479-553 (668)
288 1yr2_A Prolyl oligopeptidase; 97.7 0.0084 2.9E-07 60.2 24.1 183 56-255 167-382 (741)
289 3jro_A Fusion protein of prote 97.7 0.0019 6.5E-08 65.2 19.1 185 52-255 54-274 (753)
290 1yiq_A Quinohemoprotein alcoho 97.7 0.054 1.8E-06 54.0 29.6 55 293-349 496-571 (689)
291 2gop_A Trilobed protease; beta 97.7 0.0058 2E-07 54.7 20.1 138 72-218 42-206 (347)
292 1w6s_A Methanol dehydrogenase 97.7 0.051 1.7E-06 53.2 28.6 162 56-221 110-342 (599)
293 3bg1_A Protein SEC13 homolog; 97.7 0.01 3.6E-07 52.7 21.5 198 52-255 58-282 (316)
294 2xbg_A YCF48-like protein; pho 97.7 0.027 9.2E-07 50.6 24.1 226 55-345 83-320 (327)
295 3amr_A 3-phytase; beta-propell 97.6 0.024 8.2E-07 51.3 22.8 171 63-255 39-251 (355)
296 2bkl_A Prolyl endopeptidase; m 97.6 0.0071 2.4E-07 60.3 21.1 184 54-255 123-338 (695)
297 2xbg_A YCF48-like protein; pho 97.5 0.056 1.9E-06 48.5 25.3 179 52-255 36-224 (327)
298 1tl2_A L10, protein (tachylect 97.5 0.0049 1.7E-07 51.9 14.8 135 94-253 42-199 (236)
299 2j04_B YDR362CP, TAU91; beta p 97.4 0.0098 3.3E-07 57.3 18.9 183 53-257 209-419 (524)
300 3zwu_A Alkaline phosphatase PH 97.4 0.00069 2.4E-08 65.9 10.6 71 132-207 476-548 (592)
301 2oaj_A Protein SNI1; WD40 repe 97.3 0.0076 2.6E-07 62.1 17.9 148 53-221 60-242 (902)
302 3iuj_A Prolyl endopeptidase; h 97.3 0.1 3.5E-06 51.9 25.2 161 54-231 131-324 (693)
303 2xdw_A Prolyl endopeptidase; a 97.2 0.063 2.2E-06 53.5 23.0 186 116-348 100-321 (710)
304 1flg_A Protein (quinoprotein e 97.2 0.14 4.9E-06 49.8 24.9 108 63-184 68-198 (582)
305 2j04_A TAU60, YPL007P, hypothe 97.2 0.012 4.2E-07 56.9 16.7 134 53-208 131-286 (588)
306 2oit_A Nucleoporin 214KDA; NH2 97.2 0.044 1.5E-06 51.3 20.0 148 53-220 38-222 (434)
307 3vu4_A KMHSV2; beta-propeller 97.2 0.017 5.8E-07 52.3 16.7 133 69-220 155-335 (355)
308 1kv9_A Type II quinohemoprotei 97.2 0.034 1.2E-06 55.2 20.0 84 169-256 437-521 (668)
309 1yr2_A Prolyl oligopeptidase; 97.1 0.27 9.3E-06 49.2 26.0 157 61-222 116-304 (741)
310 1yiq_A Quinohemoprotein alcoho 97.1 0.045 1.6E-06 54.5 20.0 84 169-256 454-538 (689)
311 3vu4_A KMHSV2; beta-propeller 97.1 0.16 5.4E-06 45.8 27.2 226 52-348 20-272 (355)
312 4ggc_A P55CDC, cell division c 97.0 0.14 4.7E-06 44.5 30.2 144 55-221 29-181 (318)
313 2oit_A Nucleoporin 214KDA; NH2 96.9 0.019 6.6E-07 53.8 14.8 151 53-221 94-278 (434)
314 2bkl_A Prolyl endopeptidase; m 96.8 0.19 6.3E-06 49.9 21.7 180 55-255 171-383 (695)
315 4a9v_A PHOX; hydrolase, beta-p 96.6 0.028 9.7E-07 54.0 13.1 117 191-336 385-551 (592)
316 3zwu_A Alkaline phosphatase PH 96.5 0.048 1.6E-06 53.0 14.6 119 190-335 384-550 (592)
317 3iuj_A Prolyl endopeptidase; h 96.4 0.38 1.3E-05 47.7 20.8 166 133-349 130-316 (693)
318 4gq1_A NUP37; propeller, trans 96.4 0.57 2E-05 42.7 21.4 138 65-221 103-286 (393)
319 2w18_A PALB2, fancn, partner a 96.3 0.58 2E-05 42.3 22.7 183 63-255 144-346 (356)
320 2w18_A PALB2, fancn, partner a 96.3 0.52 1.8E-05 42.6 18.8 137 64-219 194-355 (356)
321 4gq1_A NUP37; propeller, trans 96.1 0.81 2.8E-05 41.6 22.6 68 52-120 137-215 (393)
322 4asc_A Kelch repeat and BTB do 95.7 0.97 3.3E-05 39.7 25.9 209 73-333 13-249 (315)
323 1k3i_A Galactose oxidase precu 95.6 2 6.9E-05 42.2 22.5 121 53-185 187-329 (656)
324 1k3i_A Galactose oxidase precu 95.3 2 7E-05 42.1 20.8 119 56-184 247-383 (656)
325 1zgk_A Kelch-like ECH-associat 95.3 1.3 4.6E-05 38.6 24.1 218 73-347 39-287 (308)
326 1sqj_A OXG-RCBH, oligoxylogluc 95.3 2.9 9.8E-05 42.2 23.5 97 52-149 15-140 (789)
327 3ii7_A Kelch-like protein 7; p 95.3 1.4 4.7E-05 38.4 26.5 221 72-347 23-272 (306)
328 2woz_A Kelch repeat and BTB do 95.1 1.5 5.3E-05 38.4 18.4 132 75-221 80-231 (318)
329 2cn3_A Xyloglucanase, beta-1,4 95.1 3 0.0001 41.6 26.6 96 53-149 24-151 (737)
330 2hz6_A Endoplasmic reticulum t 95.0 0.031 1E-06 51.1 5.8 50 169-220 18-67 (369)
331 2xe4_A Oligopeptidase B; hydro 94.8 1.2 4.2E-05 44.6 17.4 103 133-250 175-285 (751)
332 2zwa_A Leucine carboxyl methyl 94.7 3.6 0.00012 40.8 20.3 144 63-222 397-578 (695)
333 2xn4_A Kelch-like protein 2; s 94.5 2.2 7.5E-05 37.0 24.4 218 73-347 30-276 (302)
334 4asc_A Kelch repeat and BTB do 93.6 3.4 0.00011 36.1 21.5 132 75-221 69-221 (315)
335 2vpj_A Kelch-like protein 12; 93.6 3.2 0.00011 35.8 26.9 219 73-347 31-278 (301)
336 2vpj_A Kelch-like protein 12; 93.5 3.4 0.00011 35.7 23.2 143 63-221 62-231 (301)
337 2xn4_A Kelch-like protein 2; s 93.3 3.7 0.00013 35.5 22.4 145 63-221 61-229 (302)
338 2woz_A Kelch repeat and BTB do 93.2 4 0.00014 35.7 26.0 207 74-333 25-259 (318)
339 3a0f_A Xyloglucanase; beta-pro 92.5 9.5 0.00032 38.2 26.0 100 49-149 18-152 (763)
340 2uvk_A YJHT; unknown function, 92.4 5.5 0.00019 35.3 22.8 152 63-219 19-224 (357)
341 3ii7_A Kelch-like protein 7; p 92.1 5.4 0.00018 34.5 24.6 147 63-221 55-225 (306)
342 1zgk_A Kelch-like ECH-associat 91.5 6.4 0.00022 34.1 24.7 132 73-221 90-240 (308)
343 1xip_A Nucleoporin NUP159; bet 90.9 9.2 0.00032 34.9 15.8 142 51-222 37-192 (388)
344 2be1_A Serine/threonine-protei 90.5 1 3.5E-05 40.4 8.7 105 63-186 10-137 (339)
345 2xe4_A Oligopeptidase B; hydro 89.1 19 0.00066 35.8 18.4 112 98-222 178-305 (751)
346 2cn3_A Xyloglucanase, beta-1,4 88.3 9 0.00031 38.2 14.7 146 55-209 135-321 (737)
347 2be1_A Serine/threonine-protei 85.4 4.2 0.00014 36.4 9.3 26 62-87 110-135 (339)
348 3sbq_A Nitrous-oxide reductase 79.2 5.6 0.00019 38.2 7.8 85 171-255 299-397 (638)
349 1xip_A Nucleoporin NUP159; bet 77.7 41 0.0014 30.5 19.4 127 53-206 89-230 (388)
350 3a0f_A Xyloglucanase; beta-pro 76.1 52 0.0018 32.8 14.6 149 55-219 591-760 (763)
351 1sqj_A OXG-RCBH, oligoxylogluc 69.7 54 0.0018 32.8 12.9 110 93-216 15-147 (789)
352 3sbq_A Nitrous-oxide reductase 69.3 19 0.00066 34.6 8.7 64 85-149 315-395 (638)
353 2zwa_A Leucine carboxyl methyl 64.9 1.1E+02 0.0037 30.0 17.9 114 63-187 451-591 (695)
354 2uvk_A YJHT; unknown function, 55.5 1E+02 0.0035 26.7 16.2 51 293-345 168-224 (357)
355 3s9j_A Member of DUF4221 famil 46.2 96 0.0033 27.9 9.0 76 199-311 37-118 (369)
356 2xzh_A Clathrin heavy chain 1; 33.1 2.5E+02 0.0085 25.0 9.2 63 50-123 258-323 (365)
357 3kvp_A Uncharacterized protein 28.2 58 0.002 21.3 3.2 17 170-186 40-56 (72)
358 1bpo_A Protein (clathrin); cla 27.4 3.7E+02 0.013 25.0 9.6 63 50-123 257-322 (494)
359 4hcz_A PHD finger protein 1; p 20.6 1.7E+02 0.0058 18.4 5.4 14 241-254 11-24 (58)
360 4fww_A Macrophage-stimulating 20.1 3E+02 0.01 25.8 8.0 65 53-120 406-480 (527)
No 1
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=100.00 E-value=5.5e-32 Score=247.90 Aligned_cols=277 Identities=24% Similarity=0.380 Sum_probs=214.0
Q ss_pred ceEecC-CCCCCCceEEEeeCCCeEEEEecCCEEEEEEcCCCeeEEeecc--------------------CCCcccCeEE
Q 018474 43 LTKLGE-GCVNHPEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHI--------------------DSQSLLGLTT 101 (355)
Q Consensus 43 ~~~~~~-~~~~~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~~~~--------------------~~~p~~gl~~ 101 (355)
.+.+.. +.+..||++++++++..+|+++.+++|+++++.+++++.+... ...|. ||++
T Consensus 9 ~~~i~~~g~~~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~-gi~~ 87 (322)
T 2fp8_A 9 LKEILIEAPSYAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTY-DISY 87 (322)
T ss_dssp -CEEEEECSSSCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEE-EEEE
T ss_pred cceeecCCccCCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCc-eEEE
Confidence 344433 5578999999995444499999999999999977777665421 24688 9999
Q ss_pred CC-CCCEEEEeCCCcEEEEcC-CC-eEEEcCC-----cCCcccEEEcc-CCcEEEEeCCCCCCCccccccccccCCCCeE
Q 018474 102 TK-DGGVILCDNEKGLLKVTE-EG-VEAIVPD-----ASFTNDVIAAS-DGTLYFTVASTKYTPTDFYKDMAEGKPYGQL 172 (355)
Q Consensus 102 d~-~g~L~v~~~~~gl~~~~~-~g-~~~~~~~-----~~~~~~l~~d~-dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l 172 (355)
|+ +|+|||++..+++++++. ++ ++.+... ...|+++++|+ +|+||+++....+........+.+....+++
T Consensus 88 ~~~~g~l~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v 167 (322)
T 2fp8_A 88 NLQNNQLYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRL 167 (322)
T ss_dssp ETTTTEEEEEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEE
T ss_pred cCCCCcEEEEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceE
Confidence 96 899999998888999996 45 6655432 26799999999 9999999976444333333334445556889
Q ss_pred EEEeCCCCeEEEeeccccccccEEEeCCCCEEEEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCCEEEE
Q 018474 173 RKYDPKLKETTVLHEGFYFANGIALSKNEDFVVVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIG 252 (355)
Q Consensus 173 ~~~dp~~~~~~~~~~~~~~pngi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~ 252 (355)
++||+++++.+.+...+..||||++++||+.+|++++..++|++|++++...+..+.+.+ .++ |+|+++|++|++||+
T Consensus 168 ~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~-~~g-P~gi~~d~~G~l~va 245 (322)
T 2fp8_A 168 IKYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK-IPN-PGNIKRNADGHFWVS 245 (322)
T ss_dssp EEEETTTTEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE-CSS-EEEEEECTTSCEEEE
T ss_pred EEEeCCCCEEEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe-CCC-CCCeEECCCCCEEEE
Confidence 999999898887777788999999999999999999988999999998755555665653 667 999999999999999
Q ss_pred eecCCchhhHhhhcchhHHHHHHhccchhhcccCCCCCCceEEEEEeCCCCeEEEEEECCCCCcccceeEEEEeCCEEEE
Q 018474 253 LIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFDGNLYL 332 (355)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~v 332 (355)
+...++.. |. ....+.|.+||+ +|+.+..+..++|..+..++.++..+++|||
T Consensus 246 ~~~~~~~~-----------------~~---------~~~~~~v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v 298 (322)
T 2fp8_A 246 SSEELDGN-----------------MH---------GRVDPKGIKFDE-FGNILEVIPLPPPFAGEHFEQIQEHDGLLYI 298 (322)
T ss_dssp EEEETTSS-----------------TT---------SCEEEEEEEECT-TSCEEEEEECCTTTTTSCCCEEEEETTEEEE
T ss_pred ecCccccc-----------------cc---------CCCccEEEEECC-CCCEEEEEECCCCCccccceEEEEeCCEEEE
Confidence 97633211 00 012367999999 9999999999888666778888888999999
Q ss_pred eecCCCeEEEeeCCCCC
Q 018474 333 ASLQSNFIGILPLDGPE 349 (355)
Q Consensus 333 ~~~~~~~i~~~~~~~~~ 349 (355)
++..+++|.++++....
T Consensus 299 ~~~~~~~i~~~~~~~~~ 315 (322)
T 2fp8_A 299 GTLFHGSVGILVYDKKG 315 (322)
T ss_dssp ECSSCSEEEEEEC----
T ss_pred eecCCCceEEEeccccc
Confidence 99999999999987543
No 2
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=99.97 E-value=1.6e-28 Score=225.82 Aligned_cols=273 Identities=20% Similarity=0.315 Sum_probs=196.8
Q ss_pred cCceEecCCCCCCCceEEEeeCCCeEEEEe-------------cCCEEEEEEcCC--CeeEEeeccC-------CCcccC
Q 018474 41 KGLTKLGEGCVNHPEDVSVVVSKGALYTAT-------------RDGWVKYFILHN--ETLVNWKHID-------SQSLLG 98 (355)
Q Consensus 41 ~~~~~~~~~~~~~p~~i~~d~~~g~l~~~~-------------~~g~i~~~~~~~--g~~~~~~~~~-------~~p~~g 98 (355)
..++.+. +...+||+|+++ .+|.+|+++ .+|+|+++|+++ ++.+++...+ .+|+ |
T Consensus 40 ~~C~~i~-~~~~G~EDi~~~-~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~Ph-G 116 (355)
T 3sre_A 40 PNCNLVK-GIDNGSEDLEIL-PNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPH-G 116 (355)
T ss_dssp SCEEECT-TCCSCCCEEEEC-TTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEE-E
T ss_pred CCCEEeC-CCCCCcceeEEc-CCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeee-e
Confidence 3566664 324799999999 589999997 689999999863 4555443322 4799 9
Q ss_pred eEECC--CC--CEEEEeCCC-----cEEEEcCCC--eEEE---cC-CcCCcccEEEccCCcEEEEeCCCCCCCccc-ccc
Q 018474 99 LTTTK--DG--GVILCDNEK-----GLLKVTEEG--VEAI---VP-DASFTNDVIAASDGTLYFTVASTKYTPTDF-YKD 162 (355)
Q Consensus 99 l~~d~--~g--~L~v~~~~~-----gl~~~~~~g--~~~~---~~-~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~-~~~ 162 (355)
|.+.. +| +|||+++.. ++++++.++ .+.+ .. ..+.||+++++++|++|+++... +..... ..+
T Consensus 117 i~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~-ftd~~~~~~e 195 (355)
T 3sre_A 117 ISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHY-FIDPYLKSWE 195 (355)
T ss_dssp EEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCS-CSSHHHHHHH
T ss_pred eEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcE-eCCcccccch
Confidence 98743 45 699998774 388888643 3322 22 23899999999999999998641 110000 111
Q ss_pred ccccCCCCeEEEEeCCCCeEEEeeccccccccEEEeCCCCEEEEEeCCCCeEEEEEeCCC-CCcceeEecccCCCCcCce
Q 018474 163 MAEGKPYGQLRKYDPKLKETTVLHEGFYFANGIALSKNEDFVVVCESWKFRCRRYWLKGD-RAGILDAFIENLPGGPDNI 241 (355)
Q Consensus 163 ~~~~~~~g~l~~~dp~~~~~~~~~~~~~~pngi~~~~dg~~l~v~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~g~p~~i 241 (355)
.+++...|++|+|||. +.+.+..++..||||+++||++.+|++++..++|++|+++.. ..+..+.+ ..++.|||+
T Consensus 196 ~~~~~~~g~vyr~d~~--~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~--~~~g~PDGi 271 (355)
T 3sre_A 196 MHLGLAWSFVTYYSPN--DVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL--SFDTLVDNI 271 (355)
T ss_dssp HHTTCCCEEEEEECTT--CCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE--ECSSEEEEE
T ss_pred hhccCCccEEEEEECC--eEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE--eCCCCCceE
Confidence 2234557899999984 677778889999999999999999999999999999999642 34455555 457899999
Q ss_pred EECC-CCCEEEEeecCCchhhHhhhcchhHHHHHHhccchhhcccCCCCCCceEEEEEeC---CCCeEEEEEECCCCCcc
Q 018474 242 NLAP-DGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDG---NDGKIIRDFNDPDATYI 317 (355)
Q Consensus 242 ~~d~-~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~---~~g~~~~~~~~~~g~~~ 317 (355)
++|+ +|++|+++..++....++ -|+. .....|.++.. ++++..+.|.+ +|...
T Consensus 272 ~vD~e~G~lwva~~~~g~~v~~~-------------~P~~---------~~~s~v~rI~~~~~~~~~v~~v~~d-dG~~l 328 (355)
T 3sre_A 272 SVDPVTGDLWVGCHPNGMRIFFY-------------DAEN---------PPGSEVLRIQDILSEEPKVTVVYAE-NGTVL 328 (355)
T ss_dssp EECTTTCCEEEEEESCHHHHHSC-------------CTTS---------CCCEEEEEEECTTSSSCEEEEEEEE-CSSSC
T ss_pred EEeCCCCcEEEEecCCceEEEEE-------------CCCC---------CCCCEEEEEEccCCCCcEEEEEEEc-CCCEE
Confidence 9999 599999886432222211 1110 12356888873 37888999988 88888
Q ss_pred cceeEEEEeCCEEEEeecCCCeEEEeeC
Q 018474 318 SFVTSAAEFDGNLYLASLQSNFIGILPL 345 (355)
Q Consensus 318 ~~~~~~~~~~g~L~v~~~~~~~i~~~~~ 345 (355)
...+.+.+.+|+||+|+...+ +..|+|
T Consensus 329 ~~~T~a~~~~g~L~iGsv~~~-~l~c~~ 355 (355)
T 3sre_A 329 QGSTVAAVYKGKLLIGTVFHK-ALYCDL 355 (355)
T ss_dssp CSEEEEEEETTEEEEEESSSC-EEEEEC
T ss_pred EeeEEEEEECCEEEEEEcCCC-ceeccC
Confidence 889989999999999999777 666654
No 3
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.96 E-value=5.3e-26 Score=206.46 Aligned_cols=253 Identities=15% Similarity=0.214 Sum_probs=191.2
Q ss_pred CceEecCCCCCCCceEEEeeCCC-eEEEEecCCEEEEEEcCCCeeEEeeccCCCcccCeEECCCCCEEEEeCC-CcEEEE
Q 018474 42 GLTKLGEGCVNHPEDVSVVVSKG-ALYTATRDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGGVILCDNE-KGLLKV 119 (355)
Q Consensus 42 ~~~~~~~~~~~~p~~i~~d~~~g-~l~~~~~~g~i~~~~~~~g~~~~~~~~~~~p~~gl~~d~~g~L~v~~~~-~gl~~~ 119 (355)
..+++..+ +..+|+++++++++ .+|++..+++|+++++ +++...+....+.+. ++++|++|+||+++.. +++.++
T Consensus 36 ~~~~l~~~-~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~~~~~~~~~~~~~-gl~~d~dG~l~v~~~~~~~v~~~ 112 (305)
T 3dr2_A 36 RLLTLYDQ-ATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGTVDVLLDATAFTN-GNAVDAQQRLVHCEHGRRAITRS 112 (305)
T ss_dssp CCEEEECC-CSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSCEEEEEESCSCEE-EEEECTTSCEEEEETTTTEEEEE
T ss_pred ceEEEecC-CcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCCEEEEeCCCCccc-eeeECCCCCEEEEECCCCEEEEE
Confidence 35667766 68899999997666 4566777899999998 777777766667789 9999999999999876 579999
Q ss_pred cCCC-eEEEcCC-----cCCcccEEEccCCcEEEEeCCCCCCCcc-cc-ccccccCCCCeEEEEeCCCCeEEEeeccccc
Q 018474 120 TEEG-VEAIVPD-----ASFTNDVIAASDGTLYFTVASTKYTPTD-FY-KDMAEGKPYGQLRKYDPKLKETTVLHEGFYF 191 (355)
Q Consensus 120 ~~~g-~~~~~~~-----~~~~~~l~~d~dG~ly~~d~~~~~~~~~-~~-~~~~~~~~~g~l~~~dp~~~~~~~~~~~~~~ 191 (355)
+.+| ++.+... ...|++++++++|++|++|.. ++... .. .........++|+++|+++++++.+. .+..
T Consensus 113 ~~~g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~--~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~ 189 (305)
T 3dr2_A 113 DADGQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPP--FGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDH 189 (305)
T ss_dssp CTTSCEEEEECEETTEECSCCCCEEECTTSCEEEECCS--GGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESS
T ss_pred CCCCCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcC--CCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCC
Confidence 8667 6655432 167999999999999999864 11000 00 00001122468999999888887776 7788
Q ss_pred cccEEEeCCCCEEEEEeCCC-----CeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCCEEEEeecCCchhhHhhhc
Q 018474 192 ANGIALSKNEDFVVVCESWK-----FRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQK 266 (355)
Q Consensus 192 pngi~~~~dg~~l~v~~~~~-----~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~ 266 (355)
|||++++||++.||++++.. ++|++|++++......+.+.+...+.|+++++|++|++|+++.
T Consensus 190 p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~~------------ 257 (305)
T 3dr2_A 190 PNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSSG------------ 257 (305)
T ss_dssp EEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECCS------------
T ss_pred CcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEecC------------
Confidence 99999999999999999863 7999999865444444555544567899999999999999983
Q ss_pred chhHHHHHHhccchhhcccCCCCCCceEEEEEeCCCCeEEEEEECCCCCcccceeEEEE--eCCEEEEeecCCCeEEEee
Q 018474 267 CREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAE--FDGNLYLASLQSNFIGILP 344 (355)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~--~~g~L~v~~~~~~~i~~~~ 344 (355)
.+|.+|++ +|+.+..+..+.+ ++.++. +++.||+++. +.|.+++
T Consensus 258 --------------------------~gv~~~~~-~g~~~~~~~~~~~-----~~~~~f~~d~~~L~it~~--~~l~~~~ 303 (305)
T 3dr2_A 258 --------------------------TGVCVFDS-DGQLLGHIPTPGT-----ASNCTFDQAQQRLFITGG--PCLWMLP 303 (305)
T ss_dssp --------------------------SEEEEECT-TSCEEEEEECSSC-----CCEEEECTTSCEEEEEET--TEEEEEE
T ss_pred --------------------------CcEEEECC-CCCEEEEEECCCc-----eeEEEEeCCCCEEEEEcC--CeEEEEE
Confidence 36999999 9999999987663 334444 4478999995 5788887
Q ss_pred CC
Q 018474 345 LD 346 (355)
Q Consensus 345 ~~ 346 (355)
++
T Consensus 304 ~~ 305 (305)
T 3dr2_A 304 LP 305 (305)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 4
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.94 E-value=2.2e-24 Score=194.54 Aligned_cols=256 Identities=18% Similarity=0.234 Sum_probs=190.5
Q ss_pred ceEecCCCCCCCceEEEeeCCC-eEEEEecCCEEEEEEcCCCeeEEeeccCCCcccCeEECCCCCEEEEeCC-CcEEEEc
Q 018474 43 LTKLGEGCVNHPEDVSVVVSKG-ALYTATRDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGGVILCDNE-KGLLKVT 120 (355)
Q Consensus 43 ~~~~~~~~~~~p~~i~~d~~~g-~l~~~~~~g~i~~~~~~~g~~~~~~~~~~~p~~gl~~d~~g~L~v~~~~-~gl~~~~ 120 (355)
.+.+..+ +..||+++++++++ .+|+++.+++|+++++.++ ...+......|. ++++|++|+||+++.. +++++++
T Consensus 20 ~~~l~~~-~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~-~l~~~~dg~l~v~~~~~~~i~~~d 96 (296)
T 3e5z_A 20 ARRLADG-FTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-LSPEMHPSHHQN-GHCLNKQGHLIACSHGLRRLERQR 96 (296)
T ss_dssp CEEEECC-CSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-EEEEESSCSSEE-EEEECTTCCEEEEETTTTEEEEEC
T ss_pred EEEEecC-CccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-eEEEECCCCCcc-eeeECCCCcEEEEecCCCeEEEEc
Confidence 3556554 68899999997666 4667778899999999777 777665566788 9999999999999976 6799999
Q ss_pred C-CC-eEEEcCC-----cCCcccEEEccCCcEEEEeCCCCC-CCccccccccccCCCCeEEEEeCCCCeEEEeecccccc
Q 018474 121 E-EG-VEAIVPD-----ASFTNDVIAASDGTLYFTVASTKY-TPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYFA 192 (355)
Q Consensus 121 ~-~g-~~~~~~~-----~~~~~~l~~d~dG~ly~~d~~~~~-~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~~~~p 192 (355)
. +| ++.+... ...|+++++|++|++|++|+.... ..... .........++|++++++ ++++.+......|
T Consensus 97 ~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~-~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~ 174 (296)
T 3e5z_A 97 EPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEG-YGGEMELPGRWVFRLAPD-GTLSAPIRDRVKP 174 (296)
T ss_dssp STTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGS-SCCCCCSSSCEEEEECTT-SCEEEEECCCSSE
T ss_pred CCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCcccccccccc-ccccccCCCcEEEEECCC-CCEEEeecCCCCC
Confidence 5 77 6655332 167899999999999999763100 00000 000011224689999997 7777777778889
Q ss_pred ccEEEeCCCCEEEEEeCCCCeEEEEEeCC-CCC-cceeEecccCCCCcCceEECCCCCEEEEeecCCchhhHhhhcchhH
Q 018474 193 NGIALSKNEDFVVVCESWKFRCRRYWLKG-DRA-GILDAFIENLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREK 270 (355)
Q Consensus 193 ngi~~~~dg~~l~v~~~~~~~i~~~~~~~-~~~-~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~ 270 (355)
++++++||++.+ ++++..++|++|+++. ... ...+.+ ....+.|+++++|++|++||++ .
T Consensus 175 ~gi~~s~dg~~l-v~~~~~~~i~~~~~~~~g~~~~~~~~~-~~~~~~p~~i~~d~~G~l~v~~-~--------------- 236 (296)
T 3e5z_A 175 NGLAFLPSGNLL-VSDTGDNATHRYCLNARGETEYQGVHF-TVEPGKTDGLRVDAGGLIWASA-G--------------- 236 (296)
T ss_dssp EEEEECTTSCEE-EEETTTTEEEEEEECSSSCEEEEEEEE-CCSSSCCCSEEEBTTSCEEEEE-T---------------
T ss_pred ccEEECCCCCEE-EEeCCCCeEEEEEECCCCcCcCCCeEe-eCCCCCCCeEEECCCCCEEEEc-C---------------
Confidence 999999999977 9999889999999862 223 333445 4455679999999999999999 4
Q ss_pred HHHHHhccchhhcccCCCCCCceEEEEEeCCCCeEEEEEECCCCCcccceeEEEEe---CCEEEEeecCCCeEEEeeCCC
Q 018474 271 WELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF---DGNLYLASLQSNFIGILPLDG 347 (355)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~---~g~L~v~~~~~~~i~~~~~~~ 347 (355)
++|.+|++ +|+.+..+..+.+ ++.++.. +++||+++. +.+.++++.+
T Consensus 237 ----------------------~~v~~~~~-~g~~~~~~~~~~~-----~~~~~f~~~d~~~L~v~t~--~~l~~~~~~~ 286 (296)
T 3e5z_A 237 ----------------------DGVHVLTP-DGDELGRVLTPQT-----TSNLCFGGPEGRTLYMTVS--TEFWSIETNV 286 (296)
T ss_dssp ----------------------TEEEEECT-TSCEEEEEECSSC-----CCEEEEESTTSCEEEEEET--TEEEEEECSC
T ss_pred ----------------------CeEEEECC-CCCEEEEEECCCC-----ceeEEEECCCCCEEEEEcC--CeEEEEEccc
Confidence 37999999 8999999987664 3344442 368999995 6899998876
Q ss_pred CCCC
Q 018474 348 PEPQ 351 (355)
Q Consensus 348 ~~~~ 351 (355)
..-|
T Consensus 287 ~~~~ 290 (296)
T 3e5z_A 287 RGLE 290 (296)
T ss_dssp CBCC
T ss_pred cccc
Confidence 5544
No 5
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.93 E-value=3.7e-23 Score=187.04 Aligned_cols=239 Identities=13% Similarity=0.141 Sum_probs=178.2
Q ss_pred CCCCCCCceEEEeeCCCeEEE-EecCCEEEEEEcCCCeeEEeeccCCCcccCeEECCCCCEEEEeCCCcEEEEcC-CC-e
Q 018474 48 EGCVNHPEDVSVVVSKGALYT-ATRDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVTE-EG-V 124 (355)
Q Consensus 48 ~~~~~~p~~i~~d~~~g~l~~-~~~~g~i~~~~~~~g~~~~~~~~~~~p~~gl~~d~~g~L~v~~~~~gl~~~~~-~g-~ 124 (355)
.....-+|+++++++++.||+ +..+++|+++++.+++...+. ....+. +++++++|+||+++ ..++++++. ++ +
T Consensus 9 ~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~-~~~~~~-~i~~~~dG~l~v~~-~~~l~~~d~~~g~~ 85 (297)
T 3g4e_A 9 PENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRVT-MDAPVS-SVALRQSGGYVATI-GTKFCALNWKEQSA 85 (297)
T ss_dssp CCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEE-CSSCEE-EEEEBTTSSEEEEE-TTEEEEEETTTTEE
T ss_pred ccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEEEe-CCCceE-EEEECCCCCEEEEE-CCeEEEEECCCCcE
Confidence 334678999999976676665 456789999999888766553 346788 99999999999998 568999995 66 6
Q ss_pred EEEcCC-----cCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeeccccccccEEEeC
Q 018474 125 EAIVPD-----ASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYFANGIALSK 199 (355)
Q Consensus 125 ~~~~~~-----~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~~~~pngi~~~~ 199 (355)
+.+... ...++++++|++|++|+++...... ........+.+|+++++ ++...+...+..|||++++|
T Consensus 86 ~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~------~~~~~~~~~~l~~~d~~-g~~~~~~~~~~~pngi~~sp 158 (297)
T 3g4e_A 86 VVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETA------PAVLERHQGALYSLFPD-HHVKKYFDQVDISNGLDWSL 158 (297)
T ss_dssp EEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSB------TTBCCTTCEEEEEECTT-SCEEEEEEEESBEEEEEECT
T ss_pred EEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccc------cccccCCCcEEEEEECC-CCEEEEeeccccccceEEcC
Confidence 655432 2568999999999999987531100 00011235689999986 56666667778899999999
Q ss_pred CCCEEEEEeCCCCeEEEEEeC--CCCCcceeEecc--cCCCCcCceEECCCCCEEEEeecCCchhhHhhhcchhHHHHHH
Q 018474 200 NEDFVVVCESWKFRCRRYWLK--GDRAGILDAFIE--NLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLD 275 (355)
Q Consensus 200 dg~~l~v~~~~~~~i~~~~~~--~~~~~~~~~~~~--~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~ 275 (355)
|++.+|++++..++|++|+++ .......+.+.. ...+.|+++++|++|++||++..+
T Consensus 159 dg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~------------------- 219 (297)
T 3g4e_A 159 DHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNG------------------- 219 (297)
T ss_dssp TSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETT-------------------
T ss_pred CCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCC-------------------
Confidence 999999999999999999974 223333344432 223679999999999999999762
Q ss_pred hccchhhcccCCCCCCceEEEEEeCCCCeEEEEEECCCCCcccceeEEEEeC---CEEEEeecC
Q 018474 276 AYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFD---GNLYLASLQ 336 (355)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~---g~L~v~~~~ 336 (355)
+.|.+||+++|+.+..+..+.. .++.+++.+ ++|||++..
T Consensus 220 -----------------~~v~~~d~~tG~~~~~i~~p~~----~~t~~~f~g~d~~~L~vt~~~ 262 (297)
T 3g4e_A 220 -----------------GRVIRLDPVTGKRLQTVKLPVD----KTTSCCFGGKNYSEMYVTCAR 262 (297)
T ss_dssp -----------------TEEEEECTTTCCEEEEEECSSS----BEEEEEEESGGGCEEEEEEBC
T ss_pred -----------------CEEEEEcCCCceEEEEEECCCC----CceEEEEeCCCCCEEEEEcCC
Confidence 4699999944999888877643 466677652 789999864
No 6
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.92 E-value=1.1e-22 Score=184.08 Aligned_cols=259 Identities=17% Similarity=0.244 Sum_probs=187.7
Q ss_pred eEecCCCCCCCceEEEeeCCCeEEEE--------ecCCEEEEEEcCCCeeEEeec-----cCCCcccCeEECCC-CCEEE
Q 018474 44 TKLGEGCVNHPEDVSVVVSKGALYTA--------TRDGWVKYFILHNETLVNWKH-----IDSQSLLGLTTTKD-GGVIL 109 (355)
Q Consensus 44 ~~~~~~~~~~p~~i~~d~~~g~l~~~--------~~~g~i~~~~~~~g~~~~~~~-----~~~~p~~gl~~d~~-g~L~v 109 (355)
+.+..+ +..|++++++ .++.+|++ ..+++|+++++.+++...+.. ....|. ++++|++ |+||+
T Consensus 11 ~~~~~~-~~~~~~~~~~-~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~-~i~~~~~~g~l~v 87 (314)
T 1pjx_A 11 TKVTED-IPGAEGPVFD-KNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPA-GCQCDRDANQLFV 87 (314)
T ss_dssp EEEECC-CTTCEEEEEC-TTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEE-EEEECSSSSEEEE
T ss_pred hhhhcc-CCCccCceEC-CCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCc-eEEEecCCCcEEE
Confidence 455544 7899999999 67788887 668899999988888776643 235688 9999999 99999
Q ss_pred EeCCCcEEEEcCCC-eEEE-cCC-----cCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeE
Q 018474 110 CDNEKGLLKVTEEG-VEAI-VPD-----ASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKET 182 (355)
Q Consensus 110 ~~~~~gl~~~~~~g-~~~~-~~~-----~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~ 182 (355)
++..+++++++.+| ++.+ ... ...|+++++|++|++|+++........++. .......++++++|++ ++.
T Consensus 88 ~~~~~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~-g~~ 164 (314)
T 1pjx_A 88 ADMRLGLLVVQTDGTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYT--RSMQEKFGSIYCFTTD-GQM 164 (314)
T ss_dssp EETTTEEEEEETTSCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCC--BTTSSSCEEEEEECTT-SCE
T ss_pred EECCCCEEEEeCCCCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCccccccccc--ccccCCCCeEEEECCC-CCE
Confidence 99777899999558 6655 321 156999999999999999864210000000 0011234689999987 777
Q ss_pred EEeeccccccccEEEe----CCCCEEEEEeCCCCeEEEEEeCC-CCCcceeEecc--cCC-CCcCceEECCCCCEEEEee
Q 018474 183 TVLHEGFYFANGIALS----KNEDFVVVCESWKFRCRRYWLKG-DRAGILDAFIE--NLP-GGPDNINLAPDGSFWIGLI 254 (355)
Q Consensus 183 ~~~~~~~~~pngi~~~----~dg~~l~v~~~~~~~i~~~~~~~-~~~~~~~~~~~--~~~-g~p~~i~~d~~G~lwv~~~ 254 (355)
+.+......|++++++ +|++.+|++++..++|++|++++ ......+.+.. ... +.|+++++|++|++|+++.
T Consensus 165 ~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~ 244 (314)
T 1pjx_A 165 IQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANW 244 (314)
T ss_dssp EEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEE
T ss_pred EEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEc
Confidence 6666666779999999 99988999998889999999752 22222222221 111 5689999999999999986
Q ss_pred cCCchhhHhhhcchhHHHHHHhccchhhcccCCCCCCceEEEEEeCCCCeEEEEEECCCCCcccceeEEEEe-CC-EEEE
Q 018474 255 KMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF-DG-NLYL 332 (355)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-~g-~L~v 332 (355)
.. ++|.++++++|+.+..+..+. ..++.++.+ ++ .||+
T Consensus 245 ~~------------------------------------~~i~~~d~~~g~~~~~~~~~~----~~~~~i~~~~dg~~l~v 284 (314)
T 1pjx_A 245 GS------------------------------------SHIEVFGPDGGQPKMRIRCPF----EKPSNLHFKPQTKTIFV 284 (314)
T ss_dssp TT------------------------------------TEEEEECTTCBSCSEEEECSS----SCEEEEEECTTSSEEEE
T ss_pred CC------------------------------------CEEEEEcCCCCcEeEEEeCCC----CCceeEEECCCCCEEEE
Confidence 42 479999993388777776543 245666654 34 4999
Q ss_pred eecCCCeEEEeeCCCC
Q 018474 333 ASLQSNFIGILPLDGP 348 (355)
Q Consensus 333 ~~~~~~~i~~~~~~~~ 348 (355)
++...+.|.++++...
T Consensus 285 ~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 285 TEHENNAVWKFEWQRN 300 (314)
T ss_dssp EETTTTEEEEEECSSC
T ss_pred EeCCCCeEEEEeCCCC
Confidence 9998899999998653
No 7
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.90 E-value=4.5e-21 Score=182.32 Aligned_cols=241 Identities=13% Similarity=0.106 Sum_probs=181.9
Q ss_pred CCCCCceEEEeeC--CCeEEEEecCCEEEEEEcCCCeeEEeeccCCCcccCeEECCCCCEEEEeCC-----CcEEEEcCC
Q 018474 50 CVNHPEDVSVVVS--KGALYTATRDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGGVILCDNE-----KGLLKVTEE 122 (355)
Q Consensus 50 ~~~~p~~i~~d~~--~g~l~~~~~~g~i~~~~~~~g~~~~~~~~~~~p~~gl~~d~~g~L~v~~~~-----~gl~~~~~~ 122 (355)
.+..|.+|++|++ ++.||++...++|+++++++++...+......|. ++++|++|+|||++.. .+++.++..
T Consensus 137 ~~~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~~~~~P~-giavd~dG~lyVad~~~~~~~~gv~~~~~~ 215 (433)
T 4hw6_A 137 AFDNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTTNIGQCA-DVNFTLNGDMVVVDDQSSDTNTGIYLFTRA 215 (433)
T ss_dssp CCSCCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECCCCSCEE-EEEECTTCCEEEEECCSCTTSEEEEEECGG
T ss_pred ccCCCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeecCCCCcc-EEEECCCCCEEEEcCCCCcccceEEEEECC
Confidence 6789999999963 6899998776889999998998888766566799 9999999999999973 357777743
Q ss_pred C--e--EEEcCCcCCcccEEEcc-CCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeE-EEeec--ccccccc
Q 018474 123 G--V--EAIVPDASFTNDVIAAS-DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKET-TVLHE--GFYFANG 194 (355)
Q Consensus 123 g--~--~~~~~~~~~~~~l~~d~-dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~-~~~~~--~~~~png 194 (355)
+ . ..+. ....|+++++|+ +|+||+++.. .++++++|++++++ +.+.. ....+.+
T Consensus 216 ~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~-----------------~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ 277 (433)
T 4hw6_A 216 SGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYH-----------------HAMISSYDPATGTLTEEEVMMDTKGSNFH 277 (433)
T ss_dssp GTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTT-----------------CSEEEEECTTTCCEEEEEEECSCCSSCEE
T ss_pred CCeecccccc-ccCCCCEEEEeCCCCeEEEEECC-----------------CCEEEEEECCCCeEEEEEeccCCCCCccc
Confidence 3 2 2333 347899999999 8999999865 56899999987776 33322 2234567
Q ss_pred EEEeCCCCEEEEEeCCCCeEEEEEeCCC--CCcceeEeccc--CC------------CCcCceEE---------CCCCCE
Q 018474 195 IALSKNEDFVVVCESWKFRCRRYWLKGD--RAGILDAFIEN--LP------------GGPDNINL---------APDGSF 249 (355)
Q Consensus 195 i~~~~dg~~l~v~~~~~~~i~~~~~~~~--~~~~~~~~~~~--~~------------g~p~~i~~---------d~~G~l 249 (355)
++++++++.||++++..++|++++.++. .......++.. .. ..|.++++ |++|+|
T Consensus 278 ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~l 357 (433)
T 4hw6_A 278 IVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDF 357 (433)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEE
T ss_pred EEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcE
Confidence 9999999999999999999999998642 22222233321 11 23777999 999999
Q ss_pred EEEeecCCchhhHhhhcchhHHHHHHhccchhhcccCCCCCCceEEEEEeCCCCeEEEEEECC--------CC-----Cc
Q 018474 250 WIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDP--------DA-----TY 316 (355)
Q Consensus 250 wv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~--------~g-----~~ 316 (355)
||+.... ..|.++++ +|+........ +| ..
T Consensus 358 yvaD~~n------------------------------------~~I~~~~~-~G~v~t~~G~g~~~~~G~~dG~~~~~~~ 400 (433)
T 4hw6_A 358 YFCDRDS------------------------------------HTVRVLTP-EGRVTTYAGRGNSREWGYVDGELRSQAL 400 (433)
T ss_dssp EEEETTT------------------------------------TEEEEECT-TSEEEEEECCCTTCSSCCBCEETTTTCB
T ss_pred EEEECCC------------------------------------CEEEEECC-CCCEEEEEeCCCCCccccCCCccccccE
Confidence 9998652 47999999 99766555321 12 12
Q ss_pred ccceeEEEEe--CCEEEEeecCCCeEEEeeCC
Q 018474 317 ISFVTSAAEF--DGNLYLASLQSNFIGILPLD 346 (355)
Q Consensus 317 ~~~~~~~~~~--~g~L~v~~~~~~~i~~~~~~ 346 (355)
+..+.+++.+ +|+|||++..+++|.++.+.
T Consensus 401 ~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 401 FNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp CSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred eCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 4567788877 69999999999999999864
No 8
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.90 E-value=9.1e-21 Score=172.10 Aligned_cols=229 Identities=17% Similarity=0.214 Sum_probs=167.8
Q ss_pred eEecCCCCCCCceEEEeeCCCeEEEEe-cCCEEEEEEcCCCeeEEeeccCCCcccCeEECCCCCEEEEeCC-Cc--EEEE
Q 018474 44 TKLGEGCVNHPEDVSVVVSKGALYTAT-RDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGGVILCDNE-KG--LLKV 119 (355)
Q Consensus 44 ~~~~~~~~~~p~~i~~d~~~g~l~~~~-~~g~i~~~~~~~g~~~~~~~~~~~p~~gl~~d~~g~L~v~~~~-~g--l~~~ 119 (355)
..++.+ ..||+++++ .++.||++. .+++|+++++.+ +...+......|. +++++++|+|||++.. ++ ++++
T Consensus 26 ~~~p~~--~~pegia~~-~~g~lyv~d~~~~~I~~~d~~g-~~~~~~~~~~~p~-gia~~~dG~l~vad~~~~~~~v~~~ 100 (306)
T 2p4o_A 26 TSFPVN--TFLENLASA-PDGTIFVTNHEVGEIVSITPDG-NQQIHATVEGKVS-GLAFTSNGDLVATGWNADSIPVVSL 100 (306)
T ss_dssp EEECTT--CCEEEEEEC-TTSCEEEEETTTTEEEEECTTC-CEEEEEECSSEEE-EEEECTTSCEEEEEECTTSCEEEEE
T ss_pred EeCCCC--CCcceEEEC-CCCCEEEEeCCCCeEEEECCCC-ceEEEEeCCCCce-eEEEcCCCcEEEEeccCCcceEEEE
Confidence 445544 689999999 466788876 579999999854 4444444556799 9999999999999854 23 8888
Q ss_pred c-CCC-eEEEcCC--cCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEe----------
Q 018474 120 T-EEG-VEAIVPD--ASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVL---------- 185 (355)
Q Consensus 120 ~-~~g-~~~~~~~--~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~---------- 185 (355)
+ ++| ++.+... ..++++++..+++.+|+++.. .+.+|++|+.+++.+..
T Consensus 101 d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~-----------------~g~i~~~d~~~~~~~v~~~~~~~~~~~ 163 (306)
T 2p4o_A 101 VKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSY-----------------RGAIWLIDVVQPSGSIWLEHPMLARSN 163 (306)
T ss_dssp ECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETT-----------------TTEEEEEETTTTEEEEEEECGGGSCSS
T ss_pred cCCCCeEEEEEeCCCccccCcccccCCCcEEEEECC-----------------CCeEEEEeCCCCcEeEEEECCcccccc
Confidence 8 577 6655432 267888888888889998864 56899999876643322
Q ss_pred -eccccccccEEEeCCCCEEEEEeCCCCeEEEEEeCC-CCCcceeEecccCCCCcCceEECCCCCEEEEeecCCchhhHh
Q 018474 186 -HEGFYFANGIALSKNEDFVVVCESWKFRCRRYWLKG-DRAGILDAFIENLPGGPDNINLAPDGSFWIGLIKMNQTGVRA 263 (355)
Q Consensus 186 -~~~~~~pngi~~~~dg~~l~v~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~ 263 (355)
...+..|||| ++|++.+|++++..++|++|++++ ...+..+.+.. . ..|+++++|++|++||+....
T Consensus 164 ~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~-~~P~gi~vd~dG~l~va~~~~------- 232 (306)
T 2p4o_A 164 SESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-Q-TNIDDFAFDVEGNLYGATHIY------- 232 (306)
T ss_dssp TTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-S-CCCSSEEEBTTCCEEEECBTT-------
T ss_pred ccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec-c-CCCCCeEECCCCCEEEEeCCC-------
Confidence 1234578998 889999999999999999999975 33444454442 2 469999999999999998652
Q ss_pred hhcchhHHHHHHhccchhhcccCCCCCCceEEEEEeCCCCeEEEEEECCCCCcccceeEEEEe-----CCEEEEeecCC
Q 018474 264 IQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF-----DGNLYLASLQS 337 (355)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-----~g~L~v~~~~~ 337 (355)
+.|.+|++ +|+.......+.+ ...+++++.. .++||+++..+
T Consensus 233 -----------------------------~~V~~~~~-~G~~~~~~~~~~~--~~~p~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 233 -----------------------------NSVVRIAP-DRSTTIIAQAEQG--VIGSTAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp -----------------------------CCEEEECT-TCCEEEEECGGGT--CTTEEEEEECCSTTTTTEEEEEECTT
T ss_pred -----------------------------CeEEEECC-CCCEEEEeecccc--cCCceEEEEecccCCCCEEEEECCCC
Confidence 46999999 8987543333222 2456777764 38999998753
No 9
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.89 E-value=1.9e-20 Score=171.61 Aligned_cols=239 Identities=18% Similarity=0.181 Sum_probs=177.9
Q ss_pred ceEecCCCCCCCceEEEeeCCCeEE-EEecCCEEEEEEcCCCeeEEeeccCCCcccCeEECCCCCEEEEeCCCcEEEEcC
Q 018474 43 LTKLGEGCVNHPEDVSVVVSKGALY-TATRDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVTE 121 (355)
Q Consensus 43 ~~~~~~~~~~~p~~i~~d~~~g~l~-~~~~~g~i~~~~~~~g~~~~~~~~~~~p~~gl~~d~~g~L~v~~~~~gl~~~~~ 121 (355)
.+.+......-+|+++++++++.+| ++..+++|+++++++++...+.. ...+. +++++++|++|+++ ..++++++.
T Consensus 40 ~~~~~~~~~~~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~-~~~v~-~i~~~~dg~l~v~~-~~gl~~~d~ 116 (326)
T 2ghs_A 40 GRVLDETPMLLGEGPTFDPASGTAWWFNILERELHELHLASGRKTVHAL-PFMGS-ALAKISDSKQLIAS-DDGLFLRDT 116 (326)
T ss_dssp CEEEECSCCSBEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEEEC-SSCEE-EEEEEETTEEEEEE-TTEEEEEET
T ss_pred eEEeeccCCCCCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEC-CCcce-EEEEeCCCeEEEEE-CCCEEEEEC
Confidence 4666655566799999997656655 45567899999998887766543 35678 89999999999998 558999995
Q ss_pred -CC-eEEEcCC-----cCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeecccccccc
Q 018474 122 -EG-VEAIVPD-----ASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYFANG 194 (355)
Q Consensus 122 -~g-~~~~~~~-----~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~~~~png 194 (355)
+| ++.+... ...++++++|++|++|+++.... .....++|++++ +++.+.+......|++
T Consensus 117 ~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~-----------~~~~~~~l~~~~--~g~~~~~~~~~~~~~~ 183 (326)
T 2ghs_A 117 ATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRK-----------AETGAGSIYHVA--KGKVTKLFADISIPNS 183 (326)
T ss_dssp TTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETT-----------CCTTCEEEEEEE--TTEEEEEEEEESSEEE
T ss_pred CCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCc-----------CCCCceEEEEEe--CCcEEEeeCCCcccCC
Confidence 67 6655432 14689999999999999874310 012356899999 5777766666677999
Q ss_pred EEEeCCCCEEEEEeCCCCeEEEEEeC--CC-CCcceeEecc--cCCCCcCceEECCCCCEEEEeecCCchhhHhhhcchh
Q 018474 195 IALSKNEDFVVVCESWKFRCRRYWLK--GD-RAGILDAFIE--NLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCRE 269 (355)
Q Consensus 195 i~~~~dg~~l~v~~~~~~~i~~~~~~--~~-~~~~~~~~~~--~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~ 269 (355)
+++++|++.+|++++..++|++|+++ +. .....+.+.. ...+.|+++++|++|++|+++...
T Consensus 184 i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~------------- 250 (326)
T 2ghs_A 184 ICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGE------------- 250 (326)
T ss_dssp EEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETT-------------
T ss_pred eEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCC-------------
Confidence 99999999999999888999999985 33 3333233322 234678999999999999998652
Q ss_pred HHHHHHhccchhhcccCCCCCCceEEEEEeCCCCeEEEEEECCCCCcccceeEEEEe---CCEEEEeecCCC
Q 018474 270 KWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF---DGNLYLASLQSN 338 (355)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~---~g~L~v~~~~~~ 338 (355)
++|.+|++ +|+.+..+..+.. .++.++.. .+.||+++...+
T Consensus 251 -----------------------~~v~~~d~-~g~~~~~i~~~~~----~~~~~af~g~d~~~L~vt~~~~~ 294 (326)
T 2ghs_A 251 -----------------------GAVDRYDT-DGNHIARYEVPGK----QTTCPAFIGPDASRLLVTSAREH 294 (326)
T ss_dssp -----------------------TEEEEECT-TCCEEEEEECSCS----BEEEEEEESTTSCEEEEEEBCTT
T ss_pred -----------------------CEEEEECC-CCCEEEEEECCCC----CcEEEEEecCCCCEEEEEecCCC
Confidence 47999999 9998888876543 46666654 268999987653
No 10
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.89 E-value=2.7e-20 Score=166.60 Aligned_cols=241 Identities=14% Similarity=0.201 Sum_probs=177.1
Q ss_pred CCCCCCCceEEEeeCCCeEEEEe-cCCEEEEEEcCCCeeEEeecc------CCCcccCeEE-CCCCCEEEEeC--CCcEE
Q 018474 48 EGCVNHPEDVSVVVSKGALYTAT-RDGWVKYFILHNETLVNWKHI------DSQSLLGLTT-TKDGGVILCDN--EKGLL 117 (355)
Q Consensus 48 ~~~~~~p~~i~~d~~~g~l~~~~-~~g~i~~~~~~~g~~~~~~~~------~~~p~~gl~~-d~~g~L~v~~~--~~gl~ 117 (355)
.+.+..|.+++++ .++.+|++. .+++|.++++.......+... ...|. ++++ +++|+||+++. .+.+.
T Consensus 26 ~g~~~~p~~v~~~-~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~-~i~~~~~~g~l~v~~~~~~~~i~ 103 (286)
T 1q7f_A 26 EGQFTEPSGVAVN-AQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPN-RVAVVRNSGDIIVTERSPTHQIQ 103 (286)
T ss_dssp TTCBSCEEEEEEC-TTCCEEEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEE-EEEEETTTTEEEEEECGGGCEEE
T ss_pred CCccCCCceEEEC-CCCCEEEEECCCCEEEEECCCCcEEEEecccCCCcccccCce-EEEEEcCCCeEEEEcCCCCCEEE
Confidence 3567899999999 567788875 578999999854334444321 13588 9999 68999999985 45788
Q ss_pred EEcCCC--eEEEcCC-cCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEee--cccccc
Q 018474 118 KVTEEG--VEAIVPD-ASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH--EGFYFA 192 (355)
Q Consensus 118 ~~~~~g--~~~~~~~-~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~--~~~~~p 192 (355)
+++++| ++.+... ...|++++++++|++|+++.. .+.+++||+++.....+. .....|
T Consensus 104 ~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~-----------------~~~i~~~~~~g~~~~~~~~~~~~~~p 166 (286)
T 1q7f_A 104 IYNQYGQFVRKFGATILQHPRGVTVDNKGRIIVVECK-----------------VMRVIIFDQNGNVLHKFGCSKHLEFP 166 (286)
T ss_dssp EECTTSCEEEEECTTTCSCEEEEEECTTSCEEEEETT-----------------TTEEEEECTTSCEEEEEECTTTCSSE
T ss_pred EECCCCcEEEEecCccCCCceEEEEeCCCCEEEEECC-----------------CCEEEEEcCCCCEEEEeCCCCccCCc
Confidence 888766 5555432 367999999999999999765 468999998765555443 345679
Q ss_pred ccEEEeCCCCEEEEEeCCCCeEEEEEeCCCCCcceeEecc-cCCCCcCceEECCCCCEEEEeecCCchhhHhhhcchhHH
Q 018474 193 NGIALSKNEDFVVVCESWKFRCRRYWLKGDRAGILDAFIE-NLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKW 271 (355)
Q Consensus 193 ngi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~ 271 (355)
++++++++|+ +|+++...++|.+|+.++.. ...+.. .....|.++++|++|++||++...
T Consensus 167 ~~i~~~~~g~-l~v~~~~~~~i~~~~~~g~~---~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~--------------- 227 (286)
T 1q7f_A 167 NGVVVNDKQE-IFISDNRAHCVKVFNYEGQY---LRQIGGEGITNYPIGVGINSNGEILIADNHN--------------- 227 (286)
T ss_dssp EEEEECSSSE-EEEEEGGGTEEEEEETTCCE---EEEESCTTTSCSEEEEEECTTCCEEEEECSS---------------
T ss_pred EEEEECCCCC-EEEEECCCCEEEEEcCCCCE---EEEEccCCccCCCcEEEECCCCCEEEEeCCC---------------
Confidence 9999999987 99999888999999976532 222321 112468999999999999998652
Q ss_pred HHHHhccchhhcccCCCCCCceEEEEEeCCCCeEEEEEECCCCCcccceeEEEEe-CCEEEEeecCCCeEEEeeCCCCCC
Q 018474 272 ELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF-DGNLYLASLQSNFIGILPLDGPEP 350 (355)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-~g~L~v~~~~~~~i~~~~~~~~~~ 350 (355)
...|.+|++ +|+.+..+..... ...+..++.+ +|+||+++. .+.|.++++....|
T Consensus 228 --------------------~~~i~~~~~-~g~~~~~~~~~~~--~~~~~~i~~~~~g~l~vs~~-~~~v~v~~~~~~~p 283 (286)
T 1q7f_A 228 --------------------NFNLTIFTQ-DGQLISALESKVK--HAQCFDVALMDDGSVVLASK-DYRLYIYRYVQLAP 283 (286)
T ss_dssp --------------------SCEEEEECT-TSCEEEEEEESSC--CSCEEEEEEETTTEEEEEET-TTEEEEEECSCCCC
T ss_pred --------------------CEEEEEECC-CCCEEEEEcccCC--CCcceeEEECCCCcEEEECC-CCeEEEEEcccccc
Confidence 127999999 9998888865432 2245556655 599999975 78999999876544
No 11
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.88 E-value=1.6e-20 Score=171.62 Aligned_cols=248 Identities=19% Similarity=0.234 Sum_probs=179.9
Q ss_pred CCCCCceEEEeeCCCeEEE-EecCCEEEEEEcCCCeeEEee-ccCCCcccCeEECCCCCEEEEeCCC-----cEEEEcC-
Q 018474 50 CVNHPEDVSVVVSKGALYT-ATRDGWVKYFILHNETLVNWK-HIDSQSLLGLTTTKDGGVILCDNEK-----GLLKVTE- 121 (355)
Q Consensus 50 ~~~~p~~i~~d~~~g~l~~-~~~~g~i~~~~~~~g~~~~~~-~~~~~p~~gl~~d~~g~L~v~~~~~-----gl~~~~~- 121 (355)
....|++++++ .++.+|+ +..+++|+++++++++...+. .....|. ++++|++|+||+++... ++++++.
T Consensus 43 ~~~~~~~~~~~-~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~-~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~ 120 (333)
T 2dg1_A 43 KGLQLEGLNFD-RQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPA-AIKIHKDGRLFVCYLGDFKSTGGIFAATEN 120 (333)
T ss_dssp SCCCEEEEEEC-TTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEE-EEEECTTSCEEEEECTTSSSCCEEEEECTT
T ss_pred cCccccCcEEC-CCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcc-eEEECCCCcEEEEeCCCCCCCceEEEEeCC
Confidence 35789999999 5666775 566889999999888877664 3345688 99999999999998664 7999995
Q ss_pred CC-eE-EEcC--CcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeeccccccccEEE
Q 018474 122 EG-VE-AIVP--DASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYFANGIAL 197 (355)
Q Consensus 122 ~g-~~-~~~~--~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~~~~pngi~~ 197 (355)
++ .+ .+.. ....++++++|++|++|+++.... .....++|+++|+++++.+.+......|+++++
T Consensus 121 ~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~-----------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~ 189 (333)
T 2dg1_A 121 GDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGY-----------STNPLGGVYYVSPDFRTVTPIIQNISVANGIAL 189 (333)
T ss_dssp SCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCB-----------TTBCCEEEEEECTTSCCEEEEEEEESSEEEEEE
T ss_pred CCEEEEEEccCccCCcccceEECCCCCEEEEecccc-----------ccCCCceEEEEeCCCCEEEEeecCCCcccceEE
Confidence 44 54 3332 126799999999999999875410 012246899999988777766656667999999
Q ss_pred eCCCCEEEEEeCCCCeEEEEEeCC--CCCcce--eEecccCC--CCcCceEECCCCCEEEEeecCCchhhHhhhcchhHH
Q 018474 198 SKNEDFVVVCESWKFRCRRYWLKG--DRAGIL--DAFIENLP--GGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKW 271 (355)
Q Consensus 198 ~~dg~~l~v~~~~~~~i~~~~~~~--~~~~~~--~~~~~~~~--g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~ 271 (355)
++|++.+|++++..++|++|+++. ...... +.+. ... ..|+++++|++|++|+++...
T Consensus 190 ~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~-~~~~~~~~~~i~~d~~G~l~v~~~~~--------------- 253 (333)
T 2dg1_A 190 STDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPY-YFTGHEGPDSCCIDSDDNLYVAMYGQ--------------- 253 (333)
T ss_dssp CTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEE-ECCSSSEEEEEEEBTTCCEEEEEETT---------------
T ss_pred CCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEE-ecCCCCCCCceEECCCCCEEEEEcCC---------------
Confidence 999999999998888999999853 212111 1111 112 368999999999999998652
Q ss_pred HHHHhccchhhcccCCCCCCceEEEEEeCCCCeEEEEEECCCCC--cccceeEEEEe--CCEEEEeecCC-----CeEEE
Q 018474 272 ELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDAT--YISFVTSAAEF--DGNLYLASLQS-----NFIGI 342 (355)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~--~~~~~~~~~~~--~g~L~v~~~~~-----~~i~~ 342 (355)
++|.++++ +|+.+..+..+... ....+..++.. +++||+++..+ ..|.+
T Consensus 254 ---------------------~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g~~~~~~~l~~ 311 (333)
T 2dg1_A 254 ---------------------GRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYT 311 (333)
T ss_dssp ---------------------TEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECGGGTCCEEEEE
T ss_pred ---------------------CEEEEECC-CCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCccCCCCCceEEE
Confidence 47999999 89988888765320 01134555553 36899998763 47888
Q ss_pred eeCCCC
Q 018474 343 LPLDGP 348 (355)
Q Consensus 343 ~~~~~~ 348 (355)
+++...
T Consensus 312 ~~~~~~ 317 (333)
T 2dg1_A 312 VNGFAK 317 (333)
T ss_dssp EECSSC
T ss_pred EecccC
Confidence 876644
No 12
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.88 E-value=2e-20 Score=177.89 Aligned_cols=241 Identities=12% Similarity=0.093 Sum_probs=181.0
Q ss_pred CCCCCceEEEee-CCCeEEEEecCCEEEEEEcCCCeeEEeeccCCCcccCeEECCCCC-EEEEeCCC-----cEEEEcCC
Q 018474 50 CVNHPEDVSVVV-SKGALYTATRDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGG-VILCDNEK-----GLLKVTEE 122 (355)
Q Consensus 50 ~~~~p~~i~~d~-~~g~l~~~~~~g~i~~~~~~~g~~~~~~~~~~~p~~gl~~d~~g~-L~v~~~~~-----gl~~~~~~ 122 (355)
++..|.+|++|| +++.||++...++|.+++++++++..+......|. ++++|++|+ ||+++... .++.++++
T Consensus 135 ~~~~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P~-~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~ 213 (430)
T 3tc9_A 135 GFGGAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVR-TICWTHEADSMIITNDQNNNDRPNNYILTRE 213 (430)
T ss_dssp CCSCCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEECCCSCEE-EEEECTTSSEEEEEECCSCTTSEEEEEEEGG
T ss_pred CCCCCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEecCCCCcc-eEEEeCCCCEEEEEeCCCCcccceEEEEeCC
Confidence 478999999996 47899998877899999998888777766667799 999999998 99999742 35556654
Q ss_pred C-e---EEEcCCcCCcccEEEcc-CCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEee--ccccccccE
Q 018474 123 G-V---EAIVPDASFTNDVIAAS-DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH--EGFYFANGI 195 (355)
Q Consensus 123 g-~---~~~~~~~~~~~~l~~d~-dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~--~~~~~pngi 195 (355)
| . ..+. ....|+++++++ +|+||++|.. .+++++|+++++....+. .....|+++
T Consensus 214 g~~~~~~~l~-~~~~p~giavdp~~g~lyv~d~~-----------------~~~V~~~~~~~~~~~~~~~~~~~~~P~gi 275 (430)
T 3tc9_A 214 SGFKVITELT-KGQNCNGAETHPINGELYFNSWN-----------------AGQVFRYDFTTQETTPLFTIQDSGWEFHI 275 (430)
T ss_dssp GTSCSEEEEE-ECSSCCCEEECTTTCCEEEEETT-----------------TTEEEEEETTTTEEEEEEECSSSSCCEEE
T ss_pred Cceeeeeeec-cCCCceEEEEeCCCCEEEEEECC-----------------CCEEEEEECCCCcEEEEEEcCCCCcceeE
Confidence 4 2 2333 247899999999 8899999875 568999999888763332 233579999
Q ss_pred EEeCCCCEEEEEeCCCCeEEEEEeCCC--CCcceeEeccc--CC------------CCcC-ceEE--------CCCCCEE
Q 018474 196 ALSKNEDFVVVCESWKFRCRRYWLKGD--RAGILDAFIEN--LP------------GGPD-NINL--------APDGSFW 250 (355)
Q Consensus 196 ~~~~dg~~l~v~~~~~~~i~~~~~~~~--~~~~~~~~~~~--~~------------g~p~-~i~~--------d~~G~lw 250 (355)
+++++|+.+|+++...++|++++.++. .......+... .. ..|. ++++ |++|+||
T Consensus 276 a~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~ly 355 (430)
T 3tc9_A 276 QFHPSGNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFY 355 (430)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEE
T ss_pred EEcCCCCEEEEEECCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEE
Confidence 999999999999999999999998753 12222223211 11 1366 6776 5679999
Q ss_pred EEeecCCchhhHhhhcchhHHHHHHhccchhhcccCCCCCCceEEEEEeCCCCeEEEEEECC--------CC-----Ccc
Q 018474 251 IGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDP--------DA-----TYI 317 (355)
Q Consensus 251 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~--------~g-----~~~ 317 (355)
|+.... ..|.++++ +|+........ +| ..+
T Consensus 356 vaD~~n------------------------------------~~I~~i~~-~G~v~~~~g~g~~~~~G~~dG~~~~~~~~ 398 (430)
T 3tc9_A 356 FCDREN------------------------------------HCIRILTP-QGRVTTFAGRGSNGTSGYNDGDLRQEARF 398 (430)
T ss_dssp EEEGGG------------------------------------TEEEEECT-TSEEEEEEECCTTSSSSCBCEETTTTCBC
T ss_pred EEECCC------------------------------------cEEEEECC-CCcEEEEEeCCCCCCCcccCCCchhhcEe
Confidence 998752 47999999 99876665431 22 124
Q ss_pred cceeEEEEe--CCEEEEeecCCCeEEEeeCC
Q 018474 318 SFVTSAAEF--DGNLYLASLQSNFIGILPLD 346 (355)
Q Consensus 318 ~~~~~~~~~--~g~L~v~~~~~~~i~~~~~~ 346 (355)
..+.+++.+ +++|||++..+++|.++.++
T Consensus 399 ~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 399 NHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp SSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 567788876 49999999999999999764
No 13
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.88 E-value=2.2e-20 Score=165.38 Aligned_cols=235 Identities=16% Similarity=0.162 Sum_probs=169.1
Q ss_pred CCceEEEeeCCCeEEE-E-ecCCEEEEEEcCCCeeEEeecc-CCCcccCeEECCCCCEEEEeCCCcEEEEcCCC--eEEE
Q 018474 53 HPEDVSVVVSKGALYT-A-TRDGWVKYFILHNETLVNWKHI-DSQSLLGLTTTKDGGVILCDNEKGLLKVTEEG--VEAI 127 (355)
Q Consensus 53 ~p~~i~~d~~~g~l~~-~-~~~g~i~~~~~~~g~~~~~~~~-~~~p~~gl~~d~~g~L~v~~~~~gl~~~~~~g--~~~~ 127 (355)
.|++|+++ .+|.+|+ + ..+++|.++++.++....+... ...|. ++++|++|+||+++..+++++++.++ ...+
T Consensus 25 ~p~~i~~~-~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~-~i~~~~~g~l~v~~~~~~i~~~d~~~~~~~~~ 102 (270)
T 1rwi_B 25 SPSGVAVD-SAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQ-GLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVL 102 (270)
T ss_dssp CEEEEEEC-TTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCC-CEEECTTCCEEEEETTTEEEEECTTCSCCEEC
T ss_pred CccceEEC-CCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcc-eeEECCCCCEEEEcCCCEEEEEeCCCceEeee
Confidence 99999999 5667998 7 4578999999865554443222 24688 99999999999999756789998654 4444
Q ss_pred cC-CcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEe-eccccccccEEEeCCCCEEE
Q 018474 128 VP-DASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVL-HEGFYFANGIALSKNEDFVV 205 (355)
Q Consensus 128 ~~-~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~-~~~~~~pngi~~~~dg~~l~ 205 (355)
.. ....|++++++++|++|+++.. .+.++++++.+...... ......|++++++++|+ +|
T Consensus 103 ~~~~~~~p~~i~~~~~g~l~v~~~~-----------------~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~-l~ 164 (270)
T 1rwi_B 103 PFDGLNYPEGLAVDTQGAVYVADRG-----------------NNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGN-VY 164 (270)
T ss_dssp CCCSCSSEEEEEECTTCCEEEEEGG-----------------GTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCC-EE
T ss_pred ecCCcCCCcceEECCCCCEEEEECC-----------------CCEEEEEECCCceeEeeccccCCCceeEEEeCCCC-EE
Confidence 32 2267999999999999999754 45799998765543322 23356799999999998 99
Q ss_pred EEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCCEEEEeecCCchhhHhhhcchhHHHHHHhccchhhccc
Q 018474 206 VCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLL 285 (355)
Q Consensus 206 v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (355)
+++...++|.+|+.++.... .........|.++++|++|++|+++...
T Consensus 165 v~~~~~~~i~~~~~~~~~~~---~~~~~~~~~p~~i~~d~~g~l~v~~~~~----------------------------- 212 (270)
T 1rwi_B 165 VTDTDNNRVVKLEAESNNQV---VLPFTDITAPWGIAVDEAGTVYVTEHNT----------------------------- 212 (270)
T ss_dssp EEEGGGTEEEEECTTTCCEE---ECCCSSCCSEEEEEECTTCCEEEEETTT-----------------------------
T ss_pred EEECCCCEEEEEecCCCceE---eecccCCCCceEEEECCCCCEEEEECCC-----------------------------
Confidence 99988889999997653221 1111111458999999999999998642
Q ss_pred CCCCCCceEEEEEeCCCCeEEEEEECCCCCcccceeEEEEe-CCEEEEeecCCCeEEEeeCCCCCC
Q 018474 286 PMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF-DGNLYLASLQSNFIGILPLDGPEP 350 (355)
Q Consensus 286 ~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-~g~L~v~~~~~~~i~~~~~~~~~~ 350 (355)
+.|.++++ +++....... .+ ...+.+++.+ +|+||+++..+++|.++++.....
T Consensus 213 -------~~v~~~~~-~~~~~~~~~~-~~--~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 213 -------NQVVKLLA-GSTTSTVLPF-TG--LNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHHH 267 (270)
T ss_dssp -------SCEEEECT-TCSCCEECCC-CS--CSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGGS
T ss_pred -------CcEEEEcC-CCCcceeecc-CC--CCCceeEEECCCCCEEEEECCCCEEEEEcCCCccc
Confidence 36999999 7764443322 22 2456677765 489999999999999999876543
No 14
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.86 E-value=7.4e-19 Score=157.30 Aligned_cols=230 Identities=17% Similarity=0.274 Sum_probs=173.7
Q ss_pred CCCCceEEEeeCCCeEEEEec-CCEEEEEEcCCCeeEEeec--cCCCcccCeEECCCCCEEEEeCC-CcEEEEcCCC-eE
Q 018474 51 VNHPEDVSVVVSKGALYTATR-DGWVKYFILHNETLVNWKH--IDSQSLLGLTTTKDGGVILCDNE-KGLLKVTEEG-VE 125 (355)
Q Consensus 51 ~~~p~~i~~d~~~g~l~~~~~-~g~i~~~~~~~g~~~~~~~--~~~~p~~gl~~d~~g~L~v~~~~-~gl~~~~~~g-~~ 125 (355)
...|.+|+++ .+|.+|+++. +++|.++++. ++...+.. ....|. ++++|++|++|+++.. +++++++.++ .+
T Consensus 14 ~~~~~~i~~d-~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~-~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~ 90 (299)
T 2z2n_A 14 DTGPYGITVS-DKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVM-CLTISSDGEVWFTENAANKIGRITKKGIIK 90 (299)
T ss_dssp SCCEEEEEEC-TTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEE-EEEECTTSCEEEEETTTTEEEEECTTSCEE
T ss_pred CCCccceEEC-CCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCcee-eEEECCCCCEEEeCCCCCeEEEECCCCcEE
Confidence 5789999999 6788999887 6899999996 77766542 235688 9999999999999874 5689998667 65
Q ss_pred EEcC--CcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEee--ccccccccEEEeCCC
Q 018474 126 AIVP--DASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH--EGFYFANGIALSKNE 201 (355)
Q Consensus 126 ~~~~--~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~--~~~~~pngi~~~~dg 201 (355)
.+.. ....|++++++++|++|+++.. .++++++|+ +++...+. .....|++++++++|
T Consensus 91 ~~~~~~~~~~~~~i~~~~~g~l~v~~~~-----------------~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g 152 (299)
T 2z2n_A 91 EYTLPNPDSAPYGITEGPNGDIWFTEMN-----------------GNRIGRITD-DGKIREYELPNKGSYPSFITLGSDN 152 (299)
T ss_dssp EEECSSTTCCEEEEEECTTSCEEEEETT-----------------TTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTS
T ss_pred EEeCCCcCCCceeeEECCCCCEEEEecC-----------------CceEEEECC-CCCEEEecCCCCCCCCceEEEcCCC
Confidence 5442 2368999999999999998754 458999999 56665443 234578999999999
Q ss_pred CEEEEEeCCCCeEEEEEeCCCCCcceeEe-cccCCCCcCceEECCCCCEEEEeecCCchhhHhhhcchhHHHHHHhccch
Q 018474 202 DFVVVCESWKFRCRRYWLKGDRAGILDAF-IENLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGL 280 (355)
Q Consensus 202 ~~l~v~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (355)
+ +|+++...++|++++.++ +...+ .......|.++++|++|++|+++...
T Consensus 153 ~-l~v~~~~~~~i~~~~~~g----~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~------------------------ 203 (299)
T 2z2n_A 153 A-LWFTENQNNAIGRITESG----DITEFKIPTPASGPVGITKGNDDALWFVEIIG------------------------ 203 (299)
T ss_dssp C-EEEEETTTTEEEEECTTC----CEEEEECSSTTCCEEEEEECTTSSEEEEETTT------------------------
T ss_pred C-EEEEeCCCCEEEEEcCCC----cEEEeeCCCCCCcceeEEECCCCCEEEEccCC------------------------
Confidence 7 999988788999998732 22222 11122357889999999999998542
Q ss_pred hhcccCCCCCCceEEEEEeCCCCeEEEEEECCCCCcccceeEEEEe-CCEEEEeecCCCeEEEeeCC
Q 018474 281 ISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF-DGNLYLASLQSNFIGILPLD 346 (355)
Q Consensus 281 ~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-~g~L~v~~~~~~~i~~~~~~ 346 (355)
++|.++++ +|+.. .+..+.. ...+..++.+ +|+||+++...+.|.+++..
T Consensus 204 ------------~~i~~~~~-~g~~~-~~~~~~~--~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~ 254 (299)
T 2z2n_A 204 ------------NKIGRITT-SGEIT-EFKIPTP--NARPHAITAGAGIDLWFTEWGANKIGRLTSN 254 (299)
T ss_dssp ------------TEEEEECT-TCCEE-EEECSST--TCCEEEEEECSTTCEEEEETTTTEEEEEETT
T ss_pred ------------ceEEEECC-CCcEE-EEECCCC--CCCceeEEECCCCCEEEeccCCceEEEECCC
Confidence 47999999 88854 3544432 3356677765 58999999889999999874
No 15
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.86 E-value=7.6e-19 Score=157.28 Aligned_cols=231 Identities=14% Similarity=0.215 Sum_probs=174.1
Q ss_pred CCCCceEEEeeCCCeEEEEec-CCEEEEEEcCCCeeEEeecc--CCCcccCeEECCCCCEEEEeCC-CcEEEEcCCC-eE
Q 018474 51 VNHPEDVSVVVSKGALYTATR-DGWVKYFILHNETLVNWKHI--DSQSLLGLTTTKDGGVILCDNE-KGLLKVTEEG-VE 125 (355)
Q Consensus 51 ~~~p~~i~~d~~~g~l~~~~~-~g~i~~~~~~~g~~~~~~~~--~~~p~~gl~~d~~g~L~v~~~~-~gl~~~~~~g-~~ 125 (355)
...|.+|+.+ .+|.+|+++. +++|.++++. +++..+... ...|. ++++|++|++|+++.. +++++++.+| .+
T Consensus 19 ~~~p~~i~~d-~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~-~i~~~~~g~l~v~~~~~~~v~~~d~~g~~~ 95 (300)
T 2qc5_A 19 DSGPYGITSS-EDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVM-CLIVSSLGDIWFTENGANKIGKLSKKGGFT 95 (300)
T ss_dssp TCCEEEEEEC-TTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEE-EEEECTTSCEEEEETTTTEEEEECTTSCEE
T ss_pred CCCcceeeEC-CCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcce-eEEECCCCCEEEEecCCCeEEEECCCCCeE
Confidence 5799999999 6788999875 6899999996 777665432 25688 9999999999999874 5689998657 55
Q ss_pred EEcC--CcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEee--ccccccccEEEeCCC
Q 018474 126 AIVP--DASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH--EGFYFANGIALSKNE 201 (355)
Q Consensus 126 ~~~~--~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~--~~~~~pngi~~~~dg 201 (355)
.+.. ....|++++++++|++|+++.. .+.++++|++ ++...+. .....|++++++++|
T Consensus 96 ~~~~~~~~~~~~~i~~~~~g~l~v~~~~-----------------~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g 157 (300)
T 2qc5_A 96 EYPLPQPDSGPYGITEGLNGDIWFTQLN-----------------GDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDN 157 (300)
T ss_dssp EEECSSTTCCEEEEEECSTTCEEEEETT-----------------TTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTS
T ss_pred EecCCCCCCCCccceECCCCCEEEEccC-----------------CCeEEEECCC-CCEEEccCCCCCCCceeEEECCCC
Confidence 4432 2267999999999999999754 4589999997 6665442 235678999999999
Q ss_pred CEEEEEeCCCCeEEEEEeCCCCCcceeEec-ccCCCCcCceEECCCCCEEEEeecCCchhhHhhhcchhHHHHHHhccch
Q 018474 202 DFVVVCESWKFRCRRYWLKGDRAGILDAFI-ENLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGL 280 (355)
Q Consensus 202 ~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (355)
+ +|+++...++|++++.++. ...+. ......|.++++|++|++|+++...
T Consensus 158 ~-l~v~~~~~~~i~~~~~~g~----~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~------------------------ 208 (300)
T 2qc5_A 158 A-LWFTENQNNSIGRITNTGK----LEEYPLPTNAAAPVGITSGNDGALWFVEIMG------------------------ 208 (300)
T ss_dssp S-EEEEETTTTEEEEECTTCC----EEEEECSSTTCCEEEEEECTTSSEEEEETTT------------------------
T ss_pred C-EEEEecCCCeEEEECCCCc----EEEeeCCCCCCCcceEEECCCCCEEEEccCC------------------------
Confidence 8 9999988889999987432 22221 1122358899999999999998642
Q ss_pred hhcccCCCCCCceEEEEEeCCCCeEEEEEECCCCCcccceeEEEEe-CCEEEEeecCCCeEEEeeCCC
Q 018474 281 ISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF-DGNLYLASLQSNFIGILPLDG 347 (355)
Q Consensus 281 ~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-~g~L~v~~~~~~~i~~~~~~~ 347 (355)
+.|.++++ +|+... +..+.+ ...+..++.+ +|+||+++...+.|.+++...
T Consensus 209 ------------~~i~~~~~-~g~~~~-~~~~~~--~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g 260 (300)
T 2qc5_A 209 ------------NKIGRITT-TGEISE-YDIPTP--NARPHAITAGKNSEIWFTEWGANQIGRITNDN 260 (300)
T ss_dssp ------------TEEEEECT-TCCEEE-EECSST--TCCEEEEEECSTTCEEEEETTTTEEEEECTTS
T ss_pred ------------CEEEEEcC-CCcEEE-EECCCC--CCCceEEEECCCCCEEEeccCCCeEEEECCCC
Confidence 47999999 887654 333332 3356667766 589999999889999998743
No 16
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.86 E-value=5.4e-19 Score=158.29 Aligned_cols=228 Identities=15% Similarity=0.198 Sum_probs=169.9
Q ss_pred CCCCceEEEeeCCCeEEEEec-CCEEEEEEcCCCeeEEeec--cCCCcccCeEECCCCCEEEEeCC-CcEEEEcCCC-eE
Q 018474 51 VNHPEDVSVVVSKGALYTATR-DGWVKYFILHNETLVNWKH--IDSQSLLGLTTTKDGGVILCDNE-KGLLKVTEEG-VE 125 (355)
Q Consensus 51 ~~~p~~i~~d~~~g~l~~~~~-~g~i~~~~~~~g~~~~~~~--~~~~p~~gl~~d~~g~L~v~~~~-~gl~~~~~~g-~~ 125 (355)
...|.+|+++ .++.+|++.. +++|+++++. ++...+.. ....|. ++++|++|++|+++.. +++++++.+| +.
T Consensus 61 ~~~~~~i~~~-~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~-~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~ 137 (300)
T 2qc5_A 61 DAKVMCLIVS-SLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPY-GITEGLNGDIWFTQLNGDRIGKLTADGTIY 137 (300)
T ss_dssp TCCEEEEEEC-TTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEE-EEEECSTTCEEEEETTTTEEEEECTTSCEE
T ss_pred CCcceeEEEC-CCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCc-cceECCCCCEEEEccCCCeEEEECCCCCEE
Confidence 4689999999 6778999876 6889999996 77665543 235688 9999999999999874 5688998667 55
Q ss_pred EEcC--CcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEee--ccccccccEEEeCCC
Q 018474 126 AIVP--DASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH--EGFYFANGIALSKNE 201 (355)
Q Consensus 126 ~~~~--~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~--~~~~~pngi~~~~dg 201 (355)
.+.. ....|+++++|++|++|+++.. .+.+++||+ ++++..+. .....|.+++++++|
T Consensus 138 ~~~~~~~~~~~~~i~~d~~g~l~v~~~~-----------------~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g 199 (300)
T 2qc5_A 138 EYDLPNKGSYPAFITLGSDNALWFTENQ-----------------NNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDG 199 (300)
T ss_dssp EEECSSTTCCEEEEEECTTSSEEEEETT-----------------TTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTS
T ss_pred EccCCCCCCCceeEEECCCCCEEEEecC-----------------CCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCC
Confidence 4422 2368999999999999999764 457999998 56665443 234578999999999
Q ss_pred CEEEEEeCCCCeEEEEEeCCCCCcceeEe-cccCCCCcCceEECCCCCEEEEeecCCchhhHhhhcchhHHHHHHhccch
Q 018474 202 DFVVVCESWKFRCRRYWLKGDRAGILDAF-IENLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGL 280 (355)
Q Consensus 202 ~~l~v~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (355)
+ +|+++...++|.+++.++. ...+ .......|.++++|++|++|+++...
T Consensus 200 ~-l~v~~~~~~~i~~~~~~g~----~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~------------------------ 250 (300)
T 2qc5_A 200 A-LWFVEIMGNKIGRITTTGE----ISEYDIPTPNARPHAITAGKNSEIWFTEWGA------------------------ 250 (300)
T ss_dssp S-EEEEETTTTEEEEECTTCC----EEEEECSSTTCCEEEEEECSTTCEEEEETTT------------------------
T ss_pred C-EEEEccCCCEEEEEcCCCc----EEEEECCCCCCCceEEEECCCCCEEEeccCC------------------------
Confidence 7 9999988889999987432 2222 11112357889999999999998541
Q ss_pred hhcccCCCCCCceEEEEEeCCCCeEEEEEECCCCCcccceeEEEEe-CCEEEEeecCCCeEEEeeCC
Q 018474 281 ISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF-DGNLYLASLQSNFIGILPLD 346 (355)
Q Consensus 281 ~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-~g~L~v~~~~~~~i~~~~~~ 346 (355)
++|.+|++ +|+.. .+..+.+ ...+.+++.+ +|+||+++. + .|.+++..
T Consensus 251 ------------~~i~~~~~-~g~~~-~~~~~~~--~~~~~~i~~~~~g~l~v~~~-~-~i~~~~p~ 299 (300)
T 2qc5_A 251 ------------NQIGRITN-DNTIQ-EYQLQTE--NAEPHGITFGKDGSVWFALK-C-KIGKLNLN 299 (300)
T ss_dssp ------------TEEEEECT-TSCEE-EEECCST--TCCCCCEEECTTSCEEEECS-S-EEEEEEEC
T ss_pred ------------CeEEEECC-CCcEE-EEECCcc--CCccceeEeCCCCCEEEEcc-C-ceEEeCCC
Confidence 47999999 88754 5555433 2345566665 599999998 6 99998754
No 17
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.86 E-value=7.7e-19 Score=157.19 Aligned_cols=231 Identities=14% Similarity=0.189 Sum_probs=170.9
Q ss_pred CCCCceEEEeeCCCeEEEEec-CCEEEEEEcCCCeeEEeec--cCCCcccCeEECCCCCEEEEeCC-CcEEEEcCCC-eE
Q 018474 51 VNHPEDVSVVVSKGALYTATR-DGWVKYFILHNETLVNWKH--IDSQSLLGLTTTKDGGVILCDNE-KGLLKVTEEG-VE 125 (355)
Q Consensus 51 ~~~p~~i~~d~~~g~l~~~~~-~g~i~~~~~~~g~~~~~~~--~~~~p~~gl~~d~~g~L~v~~~~-~gl~~~~~~g-~~ 125 (355)
...|.+|+++ .+|.+|++.. +++|+++++. ++...+.. ....|. ++++|++|+||+++.. ++++++++++ ..
T Consensus 56 ~~~~~~i~~~-~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~-~i~~~~~g~l~v~~~~~~~i~~~d~~g~~~ 132 (299)
T 2z2n_A 56 DAKVMCLTIS-SDGEVWFTENAANKIGRITKK-GIIKEYTLPNPDSAPY-GITEGPNGDIWFTEMNGNRIGRITDDGKIR 132 (299)
T ss_dssp TCCEEEEEEC-TTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEE-EEEECTTSCEEEEETTTTEEEEECTTCCEE
T ss_pred cCceeeEEEC-CCCCEEEeCCCCCeEEEECCC-CcEEEEeCCCcCCCce-eeEECCCCCEEEEecCCceEEEECCCCCEE
Confidence 4679999999 6778998876 6889999984 66665542 245688 9999999999999864 5688998766 55
Q ss_pred EEcC--CcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEe--eccccccccEEEeCCC
Q 018474 126 AIVP--DASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVL--HEGFYFANGIALSKNE 201 (355)
Q Consensus 126 ~~~~--~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~--~~~~~~pngi~~~~dg 201 (355)
.+.. ....|++++++++|++|+++.. .+.++++|+ ++++..+ ......|.+++++++|
T Consensus 133 ~~~~~~~~~~~~~i~~~~~g~l~v~~~~-----------------~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g 194 (299)
T 2z2n_A 133 EYELPNKGSYPSFITLGSDNALWFTENQ-----------------NNAIGRITE-SGDITEFKIPTPASGPVGITKGNDD 194 (299)
T ss_dssp EEECSSTTCCEEEEEECTTSCEEEEETT-----------------TTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTS
T ss_pred EecCCCCCCCCceEEEcCCCCEEEEeCC-----------------CCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCC
Confidence 4432 2367999999999999998754 468999999 6776654 2235678999999999
Q ss_pred CEEEEEeCCCCeEEEEEeCCCCCcceeEe-cccCCCCcCceEECCCCCEEEEeecCCchhhHhhhcchhHHHHHHhccch
Q 018474 202 DFVVVCESWKFRCRRYWLKGDRAGILDAF-IENLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGL 280 (355)
Q Consensus 202 ~~l~v~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (355)
+ +|+++...++|.+++.++ . ...+ .......|.++++|++|++|+++...
T Consensus 195 ~-l~v~~~~~~~i~~~~~~g-~---~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~------------------------ 245 (299)
T 2z2n_A 195 A-LWFVEIIGNKIGRITTSG-E---ITEFKIPTPNARPHAITAGAGIDLWFTEWGA------------------------ 245 (299)
T ss_dssp S-EEEEETTTTEEEEECTTC-C---EEEEECSSTTCCEEEEEECSTTCEEEEETTT------------------------
T ss_pred C-EEEEccCCceEEEECCCC-c---EEEEECCCCCCCceeEEECCCCCEEEeccCC------------------------
Confidence 8 899998788999998732 2 2222 11122458889999999999998441
Q ss_pred hhcccCCCCCCceEEEEEeCCCCeEEEEEECCCCCcccceeEEEEeCCEEEEeecCCCeEEEeeCCCC
Q 018474 281 ISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFDGNLYLASLQSNFIGILPLDGP 348 (355)
Q Consensus 281 ~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~~~i~~~~~~~~ 348 (355)
++|.++++ +|+ +..+..+.+ ...+..+...+|+||+++. .+.|.+++..+.
T Consensus 246 ------------~~i~~~d~-~g~-~~~~~~~~~--~~~~~~i~~~~g~l~v~~~-~~~l~~~~~~~~ 296 (299)
T 2z2n_A 246 ------------NKIGRLTS-NNI-IEEYPIQIK--SAEPHGICFDGETIWFAME-CDKIGKLTLIKD 296 (299)
T ss_dssp ------------TEEEEEET-TTE-EEEEECSSS--SCCEEEEEECSSCEEEEET-TTEEEEEEEC--
T ss_pred ------------ceEEEECC-CCc-eEEEeCCCC--CCccceEEecCCCEEEEec-CCcEEEEEcCcc
Confidence 47999999 886 455654433 2345555556699999987 789999987654
No 18
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.84 E-value=8.7e-18 Score=158.66 Aligned_cols=235 Identities=15% Similarity=0.122 Sum_probs=172.7
Q ss_pred CCCCCceEEEeeCCCeEEEEec-CCEEEEEEcCCCeeEEeeccCCCcccCeEECCCCC-EEEEeCCC--cEEEEcC-CC-
Q 018474 50 CVNHPEDVSVVVSKGALYTATR-DGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGG-VILCDNEK--GLLKVTE-EG- 123 (355)
Q Consensus 50 ~~~~p~~i~~d~~~g~l~~~~~-~g~i~~~~~~~g~~~~~~~~~~~p~~gl~~d~~g~-L~v~~~~~--gl~~~~~-~g- 123 (355)
.+..|.+|+++ .++.||++.. +++|+++++++++...+......+. ++++++|+ ||+++..+ .+++++. .+
T Consensus 129 ~~~~P~~la~d-~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~--ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~ 205 (409)
T 3hrp_A 129 KFKYMWGIAAV-GNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGK--PAVTKDKQRVYSIGWEGTHTVYVYMKASGW 205 (409)
T ss_dssp CCCCEEEEEEC-STTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCB--CEECTTSSEEEEEBSSTTCEEEEEEGGGTT
T ss_pred ccCCceEEEEe-CCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCc--eeEecCCCcEEEEecCCCceEEEEEcCCCc
Confidence 47899999999 6777888765 5899999998888877765544443 88998886 78887654 6888885 34
Q ss_pred -eEEE----cCCcCCcccEEEcc-CCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEe----eccc--cc
Q 018474 124 -VEAI----VPDASFTNDVIAAS-DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVL----HEGF--YF 191 (355)
Q Consensus 124 -~~~~----~~~~~~~~~l~~d~-dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~----~~~~--~~ 191 (355)
.+.+ ......|+++++++ +|.||+++. .+.+++||++++....+ ..+. ..
T Consensus 206 ~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~------------------~~~I~~~d~~~~~~~~~~~~~~~g~~~~~ 267 (409)
T 3hrp_A 206 APTRIGQLGSTFSGKIGAVALDETEEWLYFVDS------------------NKNFGRFNVKTQEVTLIKQLELSGSLGTN 267 (409)
T ss_dssp CEEEEEECCTTSCSCCCBCEECTTSSEEEEECT------------------TCEEEEEETTTCCEEEEEECCCCSCCCCS
T ss_pred eeEEeeeccchhcCCcEEEEEeCCCCeEEEEEC------------------CCcEEEEECCCCCEEEEecccccCCCCCC
Confidence 3344 21337899999999 789999753 35799999988876655 2222 22
Q ss_pred cc-cEEEeCCCCEEEEEeCCCCeEEEEEeCCCCCcceeEecccC--------------CCCcCceEECCCCCEEEEee-c
Q 018474 192 AN-GIALSKNEDFVVVCESWKFRCRRYWLKGDRAGILDAFIENL--------------PGGPDNINLAPDGSFWIGLI-K 255 (355)
Q Consensus 192 pn-gi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~--------------~g~p~~i~~d~~G~lwv~~~-~ 255 (355)
|. +++++|++..+|+++...++|++++.++. ...+.... -..|.++++|++|++||+.. .
T Consensus 268 P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~----~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~ 343 (409)
T 3hrp_A 268 PGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE----CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFK 343 (409)
T ss_dssp SCCEEEEETTTTEEEEEETTTTEEEEECTTCC----EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTT
T ss_pred ccccEEEeCCCCEEEEEeCCCCEEEEEecCCC----EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCC
Confidence 44 99999977789999999999999997653 22222111 12489999999999999986 4
Q ss_pred CCchhhHhhhcchhHHHHHHhccchhhcccCCCCCCceEEEEEe-CCCCeEEEEEECC------CC----CcccceeEEE
Q 018474 256 MNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVD-GNDGKIIRDFNDP------DA----TYISFVTSAA 324 (355)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~g~~~~~~~~~------~g----~~~~~~~~~~ 324 (355)
. ..|.+++ + +|+.......+ +| ..+..+.+++
T Consensus 344 ~------------------------------------~~I~~~~~~-~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~gia 386 (409)
T 3hrp_A 344 G------------------------------------YCLRKLDIL-DGYVSTVAGQVDVASQIDGTPLEATFNYPYDIC 386 (409)
T ss_dssp T------------------------------------CEEEEEETT-TTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEE
T ss_pred C------------------------------------CEEEEEECC-CCEEEEEeCCCCCCCcCCCChhceEeCCceEEE
Confidence 2 4799999 6 88865544331 11 1245677888
Q ss_pred EeC-CEEEEeecCCCeEEEeeCC
Q 018474 325 EFD-GNLYLASLQSNFIGILPLD 346 (355)
Q Consensus 325 ~~~-g~L~v~~~~~~~i~~~~~~ 346 (355)
.+. |+||++...+++|.++.+.
T Consensus 387 vd~~g~lyVad~~n~~Ir~i~~e 409 (409)
T 3hrp_A 387 YDGEGGYWIAEAWGKAIRKYAVE 409 (409)
T ss_dssp ECSSSEEEEEESTTCEEEEEEEC
T ss_pred EcCCCCEEEEECCCCeEEEEEeC
Confidence 765 9999999999999998763
No 19
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.83 E-value=1.8e-18 Score=158.36 Aligned_cols=242 Identities=16% Similarity=0.172 Sum_probs=169.4
Q ss_pred CCCCCceEEEeeCCCeEEEEecCC-------------------------EEEEEEcCCCeeEEeecc--CCCcccCeEEC
Q 018474 50 CVNHPEDVSVVVSKGALYTATRDG-------------------------WVKYFILHNETLVNWKHI--DSQSLLGLTTT 102 (355)
Q Consensus 50 ~~~~p~~i~~d~~~g~l~~~~~~g-------------------------~i~~~~~~~g~~~~~~~~--~~~p~~gl~~d 102 (355)
.+..|.+++++ .+|.+|++...+ .|+++|+.+|+....... ...|. ++++|
T Consensus 22 ~l~~v~~va~d-~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~-gia~d 99 (329)
T 3fvz_A 22 LPGQVSGVALD-SKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPH-GLSID 99 (329)
T ss_dssp CCSCEEEEEEC-TTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEE-EEEEC
T ss_pred ecCCceEEEEC-CCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCce-EEEEC
Confidence 46789999999 667888876644 699999988877543322 24699 99999
Q ss_pred CCCCEEEEeCCC-cEEEEcCCC----eEEEcC---------CcCCcccEEEcc-CCcEEEEeC-CCCCCCcccccccccc
Q 018474 103 KDGGVILCDNEK-GLLKVTEEG----VEAIVP---------DASFTNDVIAAS-DGTLYFTVA-STKYTPTDFYKDMAEG 166 (355)
Q Consensus 103 ~~g~L~v~~~~~-gl~~~~~~g----~~~~~~---------~~~~~~~l~~d~-dG~ly~~d~-~~~~~~~~~~~~~~~~ 166 (355)
++|+|||++... .+++++.+| +..+.. ....|+++++++ +|++|++++ .
T Consensus 100 ~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~--------------- 164 (329)
T 3fvz_A 100 TDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYC--------------- 164 (329)
T ss_dssp TTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSS---------------
T ss_pred CCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCC---------------
Confidence 999999999764 577888644 334421 125799999999 899999985 3
Q ss_pred CCCCeEEEEeCCCCeEEEeec----------cccccccEEEeCCCCEEEEEeCCCCeEEEEEeC-CCCCcceeEec-ccC
Q 018474 167 KPYGQLRKYDPKLKETTVLHE----------GFYFANGIALSKNEDFVVVCESWKFRCRRYWLK-GDRAGILDAFI-ENL 234 (355)
Q Consensus 167 ~~~g~l~~~dp~~~~~~~~~~----------~~~~pngi~~~~dg~~l~v~~~~~~~i~~~~~~-~~~~~~~~~~~-~~~ 234 (355)
.+++.+||+++.....+.. .+..|+++++++++..+|+++...++|.+|+.+ |... ..+. ...
T Consensus 165 --~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~---~~~~~~~~ 239 (329)
T 3fvz_A 165 --NSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFV---REIKHASF 239 (329)
T ss_dssp --CCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE---EEECCTTT
T ss_pred --CCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEE---EEEecccc
Confidence 4579999976544444421 234599999999966799999999999999986 3211 1121 111
Q ss_pred CCCcCceEECC------CCCEEEEeecCCchhhHhhhcchhHHHHHHhccchhhcccCCCCCCceEEEEEeCCCCeEEEE
Q 018474 235 PGGPDNINLAP------DGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRD 308 (355)
Q Consensus 235 ~g~p~~i~~d~------~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~ 308 (355)
...+.++.+.+ +|++|++... ...|..++.++|+.+..
T Consensus 240 ~~~~~~~~~~pg~~~~~~g~~~v~~~~------------------------------------~~~v~~~~~~~g~~~~~ 283 (329)
T 3fvz_A 240 GRNVFAISYIPGFLFAVNGKPYFGDQE------------------------------------PVQGFVMNFSSGEIIDV 283 (329)
T ss_dssp TTCEEEEEEETTEEEEEECCCCTTCSC------------------------------------CCCEEEEETTTCCEEEE
T ss_pred CCCcceeeecCCEEEEeCCCEEeccCC------------------------------------CcEEEEEEcCCCeEEEE
Confidence 12234444544 4444443322 24688899658998888
Q ss_pred EECCCCCcccceeEEEEe-CCEEEEeecCCCeEEEeeCCCCCC
Q 018474 309 FNDPDATYISFVTSAAEF-DGNLYLASLQSNFIGILPLDGPEP 350 (355)
Q Consensus 309 ~~~~~g~~~~~~~~~~~~-~g~L~v~~~~~~~i~~~~~~~~~~ 350 (355)
+....+. ...+.+++.+ +|+||+++..+++|.++++.....
T Consensus 284 ~~~~~~~-~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~~~~ 325 (329)
T 3fvz_A 284 FKPVRKH-FDMPHDIVASEDGTVYIGDAHTNTVWKFTLTEKME 325 (329)
T ss_dssp ECCSSSC-CSSEEEEEECTTSEEEEEESSSCCEEEEEEEECSS
T ss_pred EcCCCCc-cCCeeEEEECCCCCEEEEECCCCEEEEEeCCcccc
Confidence 8532222 4567777776 489999999999999999876543
No 20
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.82 E-value=3.6e-18 Score=157.45 Aligned_cols=237 Identities=17% Similarity=0.202 Sum_probs=163.7
Q ss_pred eEecCCCCCCCceEEEeeCCCeEEEEec---CC--EEEEEEcCCCeeEEeec-------cCCCcccCeEECCCCCEEEEe
Q 018474 44 TKLGEGCVNHPEDVSVVVSKGALYTATR---DG--WVKYFILHNETLVNWKH-------IDSQSLLGLTTTKDGGVILCD 111 (355)
Q Consensus 44 ~~~~~~~~~~p~~i~~d~~~g~l~~~~~---~g--~i~~~~~~~g~~~~~~~-------~~~~p~~gl~~d~~g~L~v~~ 111 (355)
+.+.... ..|++++++ .+|.+|++.. ++ +|..++ +++...|.. ....|+ ++++|++|+|||++
T Consensus 10 ~~v~~~~-~~p~~va~~-~~g~~~v~~~~~~~~~~~l~~~~--~g~~~~~p~~~~~~~~~~~~p~-gv~~d~~g~L~v~D 84 (343)
T 2qe8_A 10 EVVAELS-LAPGNITLT-PDGRLFLSLHQFYQPEMQVAELT--QDGLIPFPPQSGNAIITFDTVL-GIKSDGNGIVWMLD 84 (343)
T ss_dssp EEEEEES-SCEEEEEEC-TTSCEEEEECGGGCCSCSEEEEE--TTEEEESCCCCSSCCCCCSCEE-EEEECSSSEEEEEE
T ss_pred EEEEEcC-CCcceEEEC-CCCCEEEEeCCCCCCceEEEEEC--CCCeecCCCcccCcccceeEee-EEEEcCCCcEEEEc
Confidence 4444332 689999999 6778888753 34 788888 677665531 124689 99999999999999
Q ss_pred CC------CcEEEEcC-CC--eEEEcCC------cCCcccEEEcc-CCcEEEEeCCCCCCCccccccccccCCCCeEEEE
Q 018474 112 NE------KGLLKVTE-EG--VEAIVPD------ASFTNDVIAAS-DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKY 175 (355)
Q Consensus 112 ~~------~gl~~~~~-~g--~~~~~~~------~~~~~~l~~d~-dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~ 175 (355)
.. ..|++++. +| ++.+... ..+++++++|+ +|.+|++|.+. ...+++++|
T Consensus 85 ~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~--------------~~~~~i~v~ 150 (343)
T 2qe8_A 85 NGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAP--------------DDKAALIRV 150 (343)
T ss_dssp CHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCS--------------GGGCEEEEE
T ss_pred CCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCcc--------------CCCCeEEEE
Confidence 64 57999994 66 4444321 15789999997 47999998731 013467777
Q ss_pred eCCCCeEEEeecc------------------------------ccccccEEEeCCCCEEEEEeCCCCeEEEEEeC---CC
Q 018474 176 DPKLKETTVLHEG------------------------------FYFANGIALSKNEDFVVVCESWKFRCRRYWLK---GD 222 (355)
Q Consensus 176 dp~~~~~~~~~~~------------------------------~~~pngi~~~~dg~~l~v~~~~~~~i~~~~~~---~~ 222 (355)
|+++++......+ ...+|||++++||+.||+++....+|++++.+ ..
T Consensus 151 d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~ 230 (343)
T 2qe8_A 151 DLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNL 230 (343)
T ss_dssp ETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCT
T ss_pred ECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCC
Confidence 7766654433211 02479999999999999999988899999853 11
Q ss_pred CCcce------eEecccCCCCcCceEECCCCCEEEEeecCCchhhHhhhcchhHHHHHHhccchhhcccCCCCCCceEEE
Q 018474 223 RAGIL------DAFIENLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVV 296 (355)
Q Consensus 223 ~~~~~------~~~~~~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 296 (355)
..... ... ...+.|+++++|++|++|++.... +.|.
T Consensus 231 ~~~~~~~~~~~~~~--g~~g~pdgia~d~~G~l~va~~~~------------------------------------~~V~ 272 (343)
T 2qe8_A 231 QLTDAELGSKIERY--SEKPICDGISIDKDHNIYVGDLAH------------------------------------SAIG 272 (343)
T ss_dssp TCCHHHHHTTCEEE--EECCSCSCEEECTTCCEEEEEGGG------------------------------------TEEE
T ss_pred CCChhhhhcceEec--ccCCCCceEEECCCCCEEEEccCC------------------------------------CeEE
Confidence 11111 111 123479999999999999998652 4799
Q ss_pred EEeCCCCeEEEEEECCCCCcccceeEEEEe-CCEEEEeecCCCeE
Q 018474 297 KVDGNDGKIIRDFNDPDATYISFVTSAAEF-DGNLYLASLQSNFI 340 (355)
Q Consensus 297 ~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-~g~L~v~~~~~~~i 340 (355)
++|+++|+.......+. ...+++++.+ +|+||+.+...+++
T Consensus 273 ~~d~~~G~~~~~~~~~~---~~~p~~va~~~~g~l~v~~~~~~~~ 314 (343)
T 2qe8_A 273 VITSADRAYKLLVTDEK---LSWTDSFNFGSDGYLYFDCNQLHHS 314 (343)
T ss_dssp EEETTTTEEEEEEECGG---GSCEEEEEECTTSCEEEEECCGGGS
T ss_pred EEECCCCCEEEEEECCc---eecCCeeEECCCCcEEEEeCccccc
Confidence 99985677655555442 3467777775 58999998755444
No 21
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.81 E-value=1.4e-17 Score=158.71 Aligned_cols=246 Identities=14% Similarity=0.115 Sum_probs=179.2
Q ss_pred CCCCCCCceEEEee-CCCeEEEEec-CCEEEEEEcCCCeeEEeeccC----CCcccCeEE-------CCCCC-EEEEeCC
Q 018474 48 EGCVNHPEDVSVVV-SKGALYTATR-DGWVKYFILHNETLVNWKHID----SQSLLGLTT-------TKDGG-VILCDNE 113 (355)
Q Consensus 48 ~~~~~~p~~i~~d~-~~g~l~~~~~-~g~i~~~~~~~g~~~~~~~~~----~~p~~gl~~-------d~~g~-L~v~~~~ 113 (355)
...+..|.+|++|| +++.||++.. .++|.++|++++.+..+...+ .+|. +|++ |++|+ ||+++..
T Consensus 135 ~~~~~~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~-~ia~~~~~~~~d~~G~~lyvad~~ 213 (496)
T 3kya_A 135 CCGFSDNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIR-SIAFNKKIEGYADEAEYMIVAIDY 213 (496)
T ss_dssp CBCCCSEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEE-EEEECCCBTTTBCTTCEEEEEECC
T ss_pred ccccCCCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCc-EEEEeecccccCCCCCEEEEEeCC
Confidence 44567899999997 3788999876 478999999888888765432 3588 9999 99987 9999876
Q ss_pred C-------cEEEEcC--CC-e------EEEcCCcCCcccEEEcc-CCcEEEEeCCCCCCCccccccccccCCCCeEEEEe
Q 018474 114 K-------GLLKVTE--EG-V------EAIVPDASFTNDVIAAS-DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYD 176 (355)
Q Consensus 114 ~-------gl~~~~~--~g-~------~~~~~~~~~~~~l~~d~-dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~d 176 (355)
. .++.+++ +| + ..+. ....|+++++++ +|.||+++.. .+.+++||
T Consensus 214 ~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~-~~~~p~giavdp~~g~LYvtd~~-----------------~g~V~r~d 275 (496)
T 3kya_A 214 DGKGDESPSVYIIKRNADGTFDDRSDIQLIA-AYKQCNGATIHPINGELYFNSYE-----------------KGQVFRLD 275 (496)
T ss_dssp CTTGGGEEEEEEEECCTTSCCSTTSCEEEEE-EESCCCCEEECTTTCCEEEEETT-----------------TTEEEEEC
T ss_pred CCCcccCceEEEEecCCCCceeecccceeec-cCCCceEEEEcCCCCeEEEEECC-----------------CCEEEEEe
Confidence 4 2677752 35 3 2343 237899999999 6799999865 56899999
Q ss_pred CC-------CCeE------------EEe-e-ccccccccEEEeCCCCEEEEEeCCCCeEEEEEeCCCC--CcceeEeccc
Q 018474 177 PK-------LKET------------TVL-H-EGFYFANGIALSKNEDFVVVCESWKFRCRRYWLKGDR--AGILDAFIEN 233 (355)
Q Consensus 177 p~-------~~~~------------~~~-~-~~~~~pngi~~~~dg~~l~v~~~~~~~i~~~~~~~~~--~~~~~~~~~~ 233 (355)
++ +++. +.+ . .....|.+|+++|+|+.+|++++..++|++++.++.. ......++..
T Consensus 276 ~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~ 355 (496)
T 3kya_A 276 LVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGG 355 (496)
T ss_dssp HHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEB
T ss_pred cccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCC
Confidence 87 5553 122 1 2235688999999999999999999999999886532 1112233321
Q ss_pred --CCC------------CcC-ceEEC-------CCCCEEEEeecCCchhhHhhhcchhHHHHHHhccchhhcccCCCCCC
Q 018474 234 --LPG------------GPD-NINLA-------PDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDA 291 (355)
Q Consensus 234 --~~g------------~p~-~i~~d-------~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (355)
..| .|. +++.| .+|+|||++...
T Consensus 356 ~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N----------------------------------- 400 (496)
T 3kya_A 356 YKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLN----------------------------------- 400 (496)
T ss_dssp TTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGG-----------------------------------
T ss_pred CCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCC-----------------------------------
Confidence 111 366 67776 678999999762
Q ss_pred ceEEEEEeCCCCeEEEEEECC--------------CC-----CcccceeEEEEeC--CEEEEeecCCCeEEEeeCCCCC
Q 018474 292 GARVVKVDGNDGKIIRDFNDP--------------DA-----TYISFVTSAAEFD--GNLYLASLQSNFIGILPLDGPE 349 (355)
Q Consensus 292 ~~~v~~~~~~~g~~~~~~~~~--------------~g-----~~~~~~~~~~~~~--g~L~v~~~~~~~i~~~~~~~~~ 349 (355)
..|.+|++ +|.+....... +| ..++.+++++.+. |+|||++..+.+|.++.+....
T Consensus 401 -~rIr~i~~-~G~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~~~ 477 (496)
T 3kya_A 401 -FCVRKVTP-EGIVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQEE 477 (496)
T ss_dssp -TEEEEECT-TCBEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEECCCC
T ss_pred -CEEEEEeC-CCCEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECCCCc
Confidence 47999999 99765554321 22 1255677888763 8999999999999999987653
No 22
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.80 E-value=3.3e-17 Score=145.42 Aligned_cols=204 Identities=10% Similarity=0.078 Sum_probs=152.2
Q ss_pred CCCCceEEEeeCCCeEEEEec-CCEEEEEEcCCCeeEEeecc-CCCcccCeEECCC-CCEEEEeCCC-cEEEEcCCC--e
Q 018474 51 VNHPEDVSVVVSKGALYTATR-DGWVKYFILHNETLVNWKHI-DSQSLLGLTTTKD-GGVILCDNEK-GLLKVTEEG--V 124 (355)
Q Consensus 51 ~~~p~~i~~d~~~g~l~~~~~-~g~i~~~~~~~g~~~~~~~~-~~~p~~gl~~d~~-g~L~v~~~~~-gl~~~~~~g--~ 124 (355)
...|+++++|+.++.||++.. ++.|+++++.++....+... ...|. ++++|++ ++||+++... .+.+++.+| .
T Consensus 35 ~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~-~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~ 113 (267)
T 1npe_A 35 AKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPE-GIALDHLGRTIFWTDSQLDRIEVAKMDGTQR 113 (267)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEE-EEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred CCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCcc-EEEEEecCCeEEEEECCCCEEEEEEcCCCCE
Confidence 367999999976888998765 68999999965554444333 25799 9999974 7899999764 577777655 4
Q ss_pred EEEcC-CcCCcccEEEcc-CCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEee-ccccccccEEEeCCC
Q 018474 125 EAIVP-DASFTNDVIAAS-DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH-EGFYFANGIALSKNE 201 (355)
Q Consensus 125 ~~~~~-~~~~~~~l~~d~-dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~-~~~~~pngi~~~~dg 201 (355)
+.+.. ....|+++++|+ +|+||+++.. ...+.++++++++...+.+. ..+..|+|+++++++
T Consensus 114 ~~~~~~~~~~P~~i~vd~~~g~lyv~~~~---------------~~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~~~ 178 (267)
T 1npe_A 114 RVLFDTGLVNPRGIVTDPVRGNLYWTDWN---------------RDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFS 178 (267)
T ss_dssp EEEECSSCSSEEEEEEETTTTEEEEEECC---------------SSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTT
T ss_pred EEEEECCCCCccEEEEeeCCCEEEEEECC---------------CCCcEEEEEecCCCCcEEEEECCCCCCcEEEEcCCC
Confidence 44433 337899999999 5799999854 11457889988655544443 456789999999999
Q ss_pred CEEEEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCCEEEEeecCCchhhHhhhcchhHHHHHHhccchh
Q 018474 202 DFVVVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLI 281 (355)
Q Consensus 202 ~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (355)
+.+||++...++|.++++++. ..+.+.+. ...|++++.| +|++|++....
T Consensus 179 ~~lyv~d~~~~~I~~~~~~g~---~~~~~~~~-~~~P~gi~~d-~~~lyva~~~~------------------------- 228 (267)
T 1npe_A 179 SQLCWVDAGTHRAECLNPAQP---GRRKVLEG-LQYPFAVTSY-GKNLYYTDWKT------------------------- 228 (267)
T ss_dssp TEEEEEETTTTEEEEEETTEE---EEEEEEEC-CCSEEEEEEE-TTEEEEEETTT-------------------------
T ss_pred CEEEEEECCCCEEEEEecCCC---ceEEEecC-CCCceEEEEe-CCEEEEEECCC-------------------------
Confidence 899999999999999998653 22333332 3468999998 58899988652
Q ss_pred hcccCCCCCCceEEEEEeCCCCeEEEEEEC
Q 018474 282 SLLLPMGSDAGARVVKVDGNDGKIIRDFND 311 (355)
Q Consensus 282 ~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~ 311 (355)
+.|.++++++|+....+..
T Consensus 229 -----------~~v~~~d~~~g~~~~~i~~ 247 (267)
T 1npe_A 229 -----------NSVIAMDLAISKEMDTFHP 247 (267)
T ss_dssp -----------TEEEEEETTTTEEEEEECC
T ss_pred -----------CeEEEEeCCCCCceEEEcc
Confidence 4799999966888888754
No 23
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.79 E-value=1.2e-16 Score=147.57 Aligned_cols=228 Identities=13% Similarity=0.101 Sum_probs=168.0
Q ss_pred CceEEEeeCCCeEEEEecCCEEEEEEcCCCeeEEeeccCCCcccCeEEC-CCCCEEEEeCCC-cEEEEcCCC--eEEE-c
Q 018474 54 PEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHIDSQSLLGLTTT-KDGGVILCDNEK-GLLKVTEEG--VEAI-V 128 (355)
Q Consensus 54 p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~~~~~~~p~~gl~~d-~~g~L~v~~~~~-gl~~~~~~g--~~~~-~ 128 (355)
-.+.+.+ ....|+++.. ..|.++++..............|. ++++| .+++||+++... .|++++.+| .+.+ .
T Consensus 36 ~~C~~~~-~~~~ll~~~~-~~I~~i~~~g~~~~~~~~~~~~~~-~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~ 112 (349)
T 3v64_C 36 RSCKALG-PEPVLLFANR-IDIRQVLPHRSEYTLLLNNLENAI-ALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVS 112 (349)
T ss_dssp SCEEESS-SCCEEEEECB-SCEEEECTTSCCEEEEECSCSCEE-EEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC
T ss_pred Ccccccc-cCceeEeecc-cceEEEeCCCCeeEEeecCCCceE-EEEEeccccEEEEEeccCCceEEEecCCCCceEEEe
Confidence 3455555 4667777765 459999996666666555556789 99999 578899999764 588888654 4444 3
Q ss_pred CCcCCcccEEEcc-CCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEee-ccccccccEEEeCCCCEEEE
Q 018474 129 PDASFTNDVIAAS-DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH-EGFYFANGIALSKNEDFVVV 206 (355)
Q Consensus 129 ~~~~~~~~l~~d~-dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~-~~~~~pngi~~~~dg~~l~v 206 (355)
.....|.++++|+ +|+||++|.. .+.|.++++++...+.+. ..+..|++++++|++..+||
T Consensus 113 ~~~~~p~glavd~~~g~ly~~d~~-----------------~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~ 175 (349)
T 3v64_C 113 TGLESPGGLAVDWVHDKLYWTDSG-----------------TSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYW 175 (349)
T ss_dssp SSCSCCCEEEEETTTTEEEEEETT-----------------TTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEE
T ss_pred CCCCCccEEEEecCCCeEEEEcCC-----------------CCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEE
Confidence 3447899999996 6799999876 458999998766544444 56788999999998888999
Q ss_pred EeCCC-CeEEEEEeCCCCCcceeEecccCCCCcCceEECC-CCCEEEEeecCCchhhHhhhcchhHHHHHHhccchhhcc
Q 018474 207 CESWK-FRCRRYWLKGDRAGILDAFIENLPGGPDNINLAP-DGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLL 284 (355)
Q Consensus 207 ~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~-~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (355)
++... ++|++++.+|.. .+.+....-..|+++++|. +|+||++....
T Consensus 176 td~~~~~~I~r~~~dG~~---~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~---------------------------- 224 (349)
T 3v64_C 176 TDWGNTPRIEASSMDGSG---RRIIADTHLFWPNGLTIDYAGRRMYWVDAKH---------------------------- 224 (349)
T ss_dssp EECSSSCEEEEEETTSCS---CEESCCSSCSCEEEEEEETTTTEEEEEETTT----------------------------
T ss_pred eccCCCCEEEEEeCCCCC---cEEEEECCCCCcceEEEeCCCCEEEEEECCC----------------------------
Confidence 99987 899999987642 2223322234699999994 67899998652
Q ss_pred cCCCCCCceEEEEEeCCCCeEEEEEECCCCCcccceeEEEEeCCEEEEeecCCCeEEEee
Q 018474 285 LPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFDGNLYLASLQSNFIGILP 344 (355)
Q Consensus 285 ~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~~~i~~~~ 344 (355)
+.|.+++. +|...+.+.... ...+.+++..+++||+++..+++|.+++
T Consensus 225 --------~~I~~~~~-dG~~~~~~~~~~---~~~P~giav~~~~ly~td~~~~~V~~~~ 272 (349)
T 3v64_C 225 --------HVIERANL-DGSHRKAVISQG---LPHPFAITVFEDSLYWTDWHTKSINSAN 272 (349)
T ss_dssp --------TEEEEEET-TSCSCEEEECSS---CSSEEEEEEETTEEEEEETTTTEEEEEE
T ss_pred --------CEEEEEeC-CCCceEEEEeCC---CCCceEEEEECCEEEEecCCCCeEEEEE
Confidence 46999998 776444443322 3356667778899999999999999997
No 24
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.79 E-value=3.2e-17 Score=151.55 Aligned_cols=184 Identities=10% Similarity=0.106 Sum_probs=140.1
Q ss_pred CCCCceEEEeeCCCeEEEEe-cCCEEEEEEcCCCeeEEeecc-CCCcccCeEECC-CCCEEEEeCCC-cEEEEcCCC--e
Q 018474 51 VNHPEDVSVVVSKGALYTAT-RDGWVKYFILHNETLVNWKHI-DSQSLLGLTTTK-DGGVILCDNEK-GLLKVTEEG--V 124 (355)
Q Consensus 51 ~~~p~~i~~d~~~g~l~~~~-~~g~i~~~~~~~g~~~~~~~~-~~~p~~gl~~d~-~g~L~v~~~~~-gl~~~~~~g--~ 124 (355)
+..|+++++|+.++.||++. .+++|+++++.++..+.+... ...|. |+++|. .|+||+++... .|.+++.+| .
T Consensus 72 ~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~-glavd~~~g~ly~~d~~~~~I~~~~~dG~~~ 150 (349)
T 3v64_C 72 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPG-GLAVDWVHDKLYWTDSGTSRIEVANLDGAHR 150 (349)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCC-EEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred CCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCcc-EEEEecCCCeEEEEcCCCCeEEEEcCCCCce
Confidence 67899999997788888765 578999999966555544332 35688 999995 67899999764 577777666 4
Q ss_pred EEEc-CCcCCcccEEEcc-CCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEee-ccccccccEEEeCCC
Q 018474 125 EAIV-PDASFTNDVIAAS-DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH-EGFYFANGIALSKNE 201 (355)
Q Consensus 125 ~~~~-~~~~~~~~l~~d~-dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~-~~~~~pngi~~~~dg 201 (355)
+.+. .....|+++++|+ +|.||++|... .+.|+++++++...+.+. .++..||||++++++
T Consensus 151 ~~l~~~~l~~P~~iavdp~~g~ly~td~~~----------------~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~ 214 (349)
T 3v64_C 151 KVLLWQSLEKPRAIALHPMEGTIYWTDWGN----------------TPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAG 214 (349)
T ss_dssp EEEECTTCSCEEEEEEETTTTEEEEEECSS----------------SCEEEEEETTSCSCEESCCSSCSCEEEEEEETTT
T ss_pred EEEEeCCCCCcceEEEecCcCeEEEeccCC----------------CCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCC
Confidence 4443 3447899999997 67999998651 268999998766555553 467889999999988
Q ss_pred CEEEEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCCEEEEeec
Q 018474 202 DFVVVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIK 255 (355)
Q Consensus 202 ~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~ 255 (355)
+.|||+++..++|.+++++|.. .+.+.......|++++++ +|++|++...
T Consensus 215 ~~lY~aD~~~~~I~~~~~dG~~---~~~~~~~~~~~P~giav~-~~~ly~td~~ 264 (349)
T 3v64_C 215 RRMYWVDAKHHVIERANLDGSH---RKAVISQGLPHPFAITVF-EDSLYWTDWH 264 (349)
T ss_dssp TEEEEEETTTTEEEEEETTSCS---CEEEECSSCSSEEEEEEE-TTEEEEEETT
T ss_pred CEEEEEECCCCEEEEEeCCCCc---eEEEEeCCCCCceEEEEE-CCEEEEecCC
Confidence 8999999999999999997632 233333333579999995 5789999865
No 25
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.79 E-value=6.8e-17 Score=147.96 Aligned_cols=213 Identities=11% Similarity=0.101 Sum_probs=153.2
Q ss_pred CCCCceEEEeeCCCeEEEEe-cCCEEEEEEcCCCeeEEeeccCC------CcccCeEECCCCCEEEEeC--CCcEEEEcC
Q 018474 51 VNHPEDVSVVVSKGALYTAT-RDGWVKYFILHNETLVNWKHIDS------QSLLGLTTTKDGGVILCDN--EKGLLKVTE 121 (355)
Q Consensus 51 ~~~p~~i~~d~~~g~l~~~~-~~g~i~~~~~~~g~~~~~~~~~~------~p~~gl~~d~~g~L~v~~~--~~gl~~~~~ 121 (355)
...|++|+++ .++.+|++. .++.|.++|+++++.......+. .|. +|++ .+++|||+++ .+.+..++.
T Consensus 83 ~~~p~~i~~~-~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~-~i~~-~~~~lyv~~~~~~~~v~viD~ 159 (328)
T 3dsm_A 83 FTSPRYIHFL-SDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTE-QMVQ-YGKYVYVNCWSYQNRILKIDT 159 (328)
T ss_dssp CSSEEEEEEE-ETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCC-CEEE-ETTEEEEEECTTCCEEEEEET
T ss_pred CCCCcEEEEe-CCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcc-eEEE-ECCEEEEEcCCCCCEEEEEEC
Confidence 4789999997 456999998 68999999999988765444455 799 9999 5789999986 356888884
Q ss_pred -CC--eEEEcCCcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeec--cccccccEE
Q 018474 122 -EG--VEAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHE--GFYFANGIA 196 (355)
Q Consensus 122 -~g--~~~~~~~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~--~~~~pngi~ 196 (355)
++ .+.+... ..|++++++++|++|+++..... ...+. ...+.++++|++++++..... ....|++++
T Consensus 160 ~t~~~~~~i~~g-~~p~~i~~~~dG~l~v~~~~~~~------~~~~~-~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la 231 (328)
T 3dsm_A 160 ETDKVVDELTIG-IQPTSLVMDKYNKMWTITDGGYE------GSPYG-YEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQ 231 (328)
T ss_dssp TTTEEEEEEECS-SCBCCCEECTTSEEEEEBCCBCT------TCSSC-BCCCEEEEEETTTTEEEEEEECCTTCCCEEEE
T ss_pred CCCeEEEEEEcC-CCccceEEcCCCCEEEEECCCcc------CCccc-cCCceEEEEECCCCeEEEEEecCCCCCceeEE
Confidence 66 4444332 57999999999999998764100 00000 113689999999888753332 134799999
Q ss_pred EeCCCCEEEEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECC-CCCEEEEeecCCchhhHhhhcchhHHHHHH
Q 018474 197 LSKNEDFVVVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAP-DGSFWIGLIKMNQTGVRAIQKCREKWELLD 275 (355)
Q Consensus 197 ~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~-~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~ 275 (355)
++||++.+|+++. .|++++.++.+.... .+.......|+++++|+ +|++||+....-
T Consensus 232 ~~~d~~~lyv~~~---~v~~~d~~t~~~~~~-~~~~~~~~~p~gi~vdp~~g~lyva~~~~y------------------ 289 (328)
T 3dsm_A 232 LNGTRDTLYWINN---DIWRMPVEADRVPVR-PFLEFRDTKYYGLTVNPNNGEVYVADAIDY------------------ 289 (328)
T ss_dssp ECTTSCEEEEESS---SEEEEETTCSSCCSS-CSBCCCSSCEEEEEECTTTCCEEEEECTTS------------------
T ss_pred EecCCCEEEEEcc---EEEEEECCCCceeee-eeecCCCCceEEEEEcCCCCeEEEEccccc------------------
Confidence 9999999999875 899999865443221 12211134699999997 789999983210
Q ss_pred hccchhhcccCCCCCCceEEEEEeCCCCeEEEEEEC
Q 018474 276 AYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFND 311 (355)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~ 311 (355)
...+.|.+||+ +|+.+..+..
T Consensus 290 --------------~~~~~V~v~d~-~g~~~~~i~~ 310 (328)
T 3dsm_A 290 --------------QQQGIVYRYSP-QGKLIDEFYV 310 (328)
T ss_dssp --------------SSEEEEEEECT-TCCEEEEEEE
T ss_pred --------------ccCCEEEEECC-CCCEEEEEEe
Confidence 11368999999 7999888865
No 26
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.78 E-value=5.7e-17 Score=165.66 Aligned_cols=225 Identities=13% Similarity=0.188 Sum_probs=168.0
Q ss_pred CceEEEeeCCCeEEEEecCCEEEEEEcCCCeeEEeecc---------CCCcccCeEECCCCC-EEEEeCCCcEEEEcC-C
Q 018474 54 PEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHI---------DSQSLLGLTTTKDGG-VILCDNEKGLLKVTE-E 122 (355)
Q Consensus 54 p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~~~~---------~~~p~~gl~~d~~g~-L~v~~~~~gl~~~~~-~ 122 (355)
-.+|+.| .+|.||+++.+++|.++++.+++++.+... ...+. +++.|++|+ ||+++..+||+++++ +
T Consensus 359 V~~i~~d-~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~-~i~~d~~g~~lWigt~~~Gl~~~d~~~ 436 (795)
T 4a2l_A 359 VSCIVED-KDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIK-AVYVDEKKSLVYIGTHAGGLSILHRNS 436 (795)
T ss_dssp EEEEEEC-TTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEE-EEEEETTTTEEEEEETTTEEEEEETTT
T ss_pred eEEEEEC-CCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEE-EEEEcCCCCEEEEEeCcCceeEEeCCC
Confidence 4578888 788999999988899999988888776422 23466 788999999 999998789999995 6
Q ss_pred C-eEEEcCC-----cCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeecc-----c--
Q 018474 123 G-VEAIVPD-----ASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEG-----F-- 189 (355)
Q Consensus 123 g-~~~~~~~-----~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~-----~-- 189 (355)
+ ++.+... ...+.+++.|++|+||++.. ++|++||+++++++.+... +
T Consensus 437 ~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-------------------~Gl~~~~~~~~~~~~~~~~~~~~~~~~ 497 (795)
T 4a2l_A 437 GQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL-------------------SALVRFNPEQRSFTTIEKEKDGTPVVS 497 (795)
T ss_dssp CCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES-------------------SCEEEEETTTTEEEECCBCTTCCBCCC
T ss_pred CcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec-------------------CceeEEeCCCCeEEEccccccccccCC
Confidence 6 6665431 15688899999999999853 3699999998888766432 1
Q ss_pred cccccEEEeCCCCEEEEEeCCCCeEEEEEeCCCCCcceeEecc--cCCCCc----CceEECCCCCEEEEeecCCchhhHh
Q 018474 190 YFANGIALSKNEDFVVVCESWKFRCRRYWLKGDRAGILDAFIE--NLPGGP----DNINLAPDGSFWIGLIKMNQTGVRA 263 (355)
Q Consensus 190 ~~pngi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~--~~~g~p----~~i~~d~~G~lwv~~~~~~~~~~~~ 263 (355)
.....++.+++|+ +|++.. ++|.+++.++... .+.. ...+++ ..+..|++|++|+++..
T Consensus 498 ~~i~~i~~d~~g~-lWigt~--~Gl~~~~~~~~~~----~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~~-------- 562 (795)
T 4a2l_A 498 KQITTLFRDSHKR-LWIGGE--EGLSVFKQEGLDI----QKASILPVSNVTKLFTNCIYEASNGIIWVGTRE-------- 562 (795)
T ss_dssp CCEEEEEECTTCC-EEEEES--SCEEEEEEETTEE----EECCCSCSCGGGGSCEEEEEECTTSCEEEEESS--------
T ss_pred ceEEEEEECCCCC-EEEEeC--CceEEEeCCCCeE----EEecCCCCCCCCCCeeEEEEECCCCCEEEEeCC--------
Confidence 2235677888887 888764 6899999854322 1210 112233 34678999999999964
Q ss_pred hhcchhHHHHHHhccchhhcccCCCCCCceEEEEEeCCCCeEEEEEECCCCCcccceeEEEEe-CCEEEEeecCCCeEEE
Q 018474 264 IQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF-DGNLYLASLQSNFIGI 342 (355)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-~g~L~v~~~~~~~i~~ 342 (355)
|+++||+ +.+.++.|...+|+..+.+.+++++ +|+||+++ .+.|.+
T Consensus 563 ------------------------------Gl~~~d~-~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lWi~t--~~Gl~~ 609 (795)
T 4a2l_A 563 ------------------------------GFYCFNE-KDKQIKRYNTTNGLPNNVVYGILEDSFGRLWLST--NRGISC 609 (795)
T ss_dssp ------------------------------CEEEEET-TTTEEEEECGGGTCSCSCEEEEEECTTSCEEEEE--TTEEEE
T ss_pred ------------------------------CceeECC-CCCcEEEeCCCCCCchhheEEEEECCCCCEEEEc--CCceEE
Confidence 6999999 6667788877778766778888877 59999999 477888
Q ss_pred eeCCC
Q 018474 343 LPLDG 347 (355)
Q Consensus 343 ~~~~~ 347 (355)
++..+
T Consensus 610 ~~~~~ 614 (795)
T 4a2l_A 610 FNPET 614 (795)
T ss_dssp EETTT
T ss_pred EcCCC
Confidence 87653
No 27
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.77 E-value=8.4e-17 Score=150.75 Aligned_cols=184 Identities=10% Similarity=0.106 Sum_probs=138.8
Q ss_pred CCCCceEEEeeCCCeEEEEe-cCCEEEEEEcCCCeeEEeecc-CCCcccCeEECC-CCCEEEEeCCC-cEEEEcCCC--e
Q 018474 51 VNHPEDVSVVVSKGALYTAT-RDGWVKYFILHNETLVNWKHI-DSQSLLGLTTTK-DGGVILCDNEK-GLLKVTEEG--V 124 (355)
Q Consensus 51 ~~~p~~i~~d~~~g~l~~~~-~~g~i~~~~~~~g~~~~~~~~-~~~p~~gl~~d~-~g~L~v~~~~~-gl~~~~~~g--~ 124 (355)
+..|+++++|+.++.||++. .+++|+++++.++..+.+... ...|. |+++|. .|+||+++... .|.+++.+| .
T Consensus 115 ~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~-glavd~~~g~lY~~d~~~~~I~~~~~dg~~~ 193 (386)
T 3v65_B 115 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPG-GLAVDWVHDKLYWTDSGTSRIEVANLDGAHR 193 (386)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCC-CEEEETTTTEEEEEETTTTEEEECBTTSCSC
T ss_pred CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCcc-EEEEEeCCCeEEEEcCCCCeEEEEeCCCCce
Confidence 67899999997778888765 478999999966555554332 35789 999995 67899999874 466666666 4
Q ss_pred EEEc-CCcCCcccEEEcc-CCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEee-ccccccccEEEeCCC
Q 018474 125 EAIV-PDASFTNDVIAAS-DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH-EGFYFANGIALSKNE 201 (355)
Q Consensus 125 ~~~~-~~~~~~~~l~~d~-dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~-~~~~~pngi~~~~dg 201 (355)
+.+. .....|+++++|+ +|.||++|... .+.|+++++++...+.+. .++..||||++++++
T Consensus 194 ~~l~~~~l~~P~giavdp~~g~ly~td~~~----------------~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~ 257 (386)
T 3v65_B 194 KVLLWQSLEKPRAIALHPMEGTIYWTDWGN----------------TPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAG 257 (386)
T ss_dssp EEEECSSCSCEEEEEEETTTTEEEEEECSS----------------SCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGG
T ss_pred EEeecCCCCCCcEEEEEcCCCeEEEeccCC----------------CCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCC
Confidence 4443 3447899999997 56999998651 368999999766555443 567889999999988
Q ss_pred CEEEEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCCEEEEeec
Q 018474 202 DFVVVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIK 255 (355)
Q Consensus 202 ~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~ 255 (355)
+.|||+++..++|++++++|.. .+.+.....+.|++++++ ++++|++...
T Consensus 258 ~~lY~aD~~~~~I~~~d~dG~~---~~~~~~~~~~~P~giav~-~~~ly~td~~ 307 (386)
T 3v65_B 258 RRMYWVDAKHHVIERANLDGSH---RKAVISQGLPHPFAITVF-EDSLYWTDWH 307 (386)
T ss_dssp TEEEEEETTTTEEEEECTTSCS---CEEEECSSCSSEEEEEEE-TTEEEEEETT
T ss_pred CEEEEEECCCCEEEEEeCCCCe---eEEEEECCCCCceEEEEE-CCEEEEeeCC
Confidence 8999999999999999987632 233333233579999996 4678888865
No 28
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.77 E-value=2.1e-16 Score=147.98 Aligned_cols=229 Identities=13% Similarity=0.103 Sum_probs=168.3
Q ss_pred CceEEEeeCCCeEEEEecCCEEEEEEcCCCeeEEeeccCCCcccCeEEC-CCCCEEEEeCCC-cEEEEcCCC--eEEE-c
Q 018474 54 PEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHIDSQSLLGLTTT-KDGGVILCDNEK-GLLKVTEEG--VEAI-V 128 (355)
Q Consensus 54 p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~~~~~~~p~~gl~~d-~~g~L~v~~~~~-gl~~~~~~g--~~~~-~ 128 (355)
-.+.+.+ ....|+++.. ..|+++++..+....+......|. ++++| .+++||+++... .|++++.+| .+.+ .
T Consensus 79 ~~C~~~~-~~~~l~~~~~-~~I~~i~~~~~~~~~~~~~~~~~~-gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~ 155 (386)
T 3v65_B 79 RSCKALG-PEPVLLFANR-IDIRQVLPHRSEYTLLLNNLENAI-ALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVS 155 (386)
T ss_dssp SCEEECS-SCCEEEEECB-SCEEEECTTSCCCEEEECSCSCEE-EEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEEC
T ss_pred CeECCcc-ccceeEeecC-ccceeeccCCCcEEEEecCCCccE-EEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEe
Confidence 3455555 4566776655 569999997767666666566799 99999 578899999764 588888654 4444 3
Q ss_pred CCcCCcccEEEcc-CCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEee-ccccccccEEEeCCCCEEEE
Q 018474 129 PDASFTNDVIAAS-DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH-EGFYFANGIALSKNEDFVVV 206 (355)
Q Consensus 129 ~~~~~~~~l~~d~-dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~-~~~~~pngi~~~~dg~~l~v 206 (355)
.....|+++++|+ .|+||++|.. .++|.++++++...+.+. .++..|++++++|++..+||
T Consensus 156 ~~~~~p~glavd~~~g~lY~~d~~-----------------~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~ 218 (386)
T 3v65_B 156 TGLESPGGLAVDWVHDKLYWTDSG-----------------TSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYW 218 (386)
T ss_dssp SSCSCCCCEEEETTTTEEEEEETT-----------------TTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEE
T ss_pred CCCCCccEEEEEeCCCeEEEEcCC-----------------CCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEE
Confidence 3447899999996 6799999876 457888888766544443 46788999999998889999
Q ss_pred EeCCC-CeEEEEEeCCCCCcceeEecccCCCCcCceEEC-CCCCEEEEeecCCchhhHhhhcchhHHHHHHhccchhhcc
Q 018474 207 CESWK-FRCRRYWLKGDRAGILDAFIENLPGGPDNINLA-PDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLL 284 (355)
Q Consensus 207 ~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d-~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (355)
++... ++|++++.+|.. .+.+....-..|+++++| .+|+||++....
T Consensus 219 td~~~~~~I~r~~~dG~~---~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~---------------------------- 267 (386)
T 3v65_B 219 TDWGNTPRIEASSMDGSG---RRIIADTHLFWPNGLTIDYAGRRMYWVDAKH---------------------------- 267 (386)
T ss_dssp EECSSSCEEEEEETTSCS---CEEEECSSCSCEEEEEEEGGGTEEEEEETTT----------------------------
T ss_pred eccCCCCEEEEEeCCCCC---cEEEEECCCCCeeeEEEeCCCCEEEEEECCC----------------------------
Confidence 99887 899999987642 223332223469999999 467899998652
Q ss_pred cCCCCCCceEEEEEeCCCCeEEEEEECCCCCcccceeEEEEeCCEEEEeecCCCeEEEeeC
Q 018474 285 LPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFDGNLYLASLQSNFIGILPL 345 (355)
Q Consensus 285 ~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~~~i~~~~~ 345 (355)
..|.+++. +|...+.+... + ...+.++...+++||+++..+++|.+++.
T Consensus 268 --------~~I~~~d~-dG~~~~~~~~~-~--~~~P~giav~~~~ly~td~~~~~V~~~~~ 316 (386)
T 3v65_B 268 --------HVIERANL-DGSHRKAVISQ-G--LPHPFAITVFEDSLYWTDWHTKSINSANK 316 (386)
T ss_dssp --------TEEEEECT-TSCSCEEEECS-S--CSSEEEEEEETTEEEEEETTTTEEEEEET
T ss_pred --------CEEEEEeC-CCCeeEEEEEC-C--CCCceEEEEECCEEEEeeCCCCeEEEEEC
Confidence 46999998 77544444332 2 33566777788999999999999999973
No 29
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.77 E-value=1.5e-16 Score=145.03 Aligned_cols=184 Identities=13% Similarity=0.108 Sum_probs=135.9
Q ss_pred CCCCceEEEeeCCCeEEEEec-CCEEEEEEcCC----CeeEEeec-cCCCcccCeEECC-CCCEEEEeCCC-cEEEEcCC
Q 018474 51 VNHPEDVSVVVSKGALYTATR-DGWVKYFILHN----ETLVNWKH-IDSQSLLGLTTTK-DGGVILCDNEK-GLLKVTEE 122 (355)
Q Consensus 51 ~~~p~~i~~d~~~g~l~~~~~-~g~i~~~~~~~----g~~~~~~~-~~~~p~~gl~~d~-~g~L~v~~~~~-gl~~~~~~ 122 (355)
+..|+++++|+.++.+|++.. +++|+++++.+ ...+.+.. ....|. |+++|. +++||+++... .|.+++.+
T Consensus 29 ~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~-glavd~~~~~ly~~d~~~~~I~~~~~~ 107 (316)
T 1ijq_A 29 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD-GLAVDWIHSNIYWTDSVLGTVSVADTK 107 (316)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC-EEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcC-EEEEeecCCeEEEEECCCCEEEEEeCC
Confidence 688999999976788887665 68999999854 22233322 235788 999995 67899998764 57777765
Q ss_pred C--eEEEcC-CcCCcccEEEcc-CCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEee-ccccccccEEE
Q 018474 123 G--VEAIVP-DASFTNDVIAAS-DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH-EGFYFANGIAL 197 (355)
Q Consensus 123 g--~~~~~~-~~~~~~~l~~d~-dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~-~~~~~pngi~~ 197 (355)
| .+.+.. ....|+++++|+ +|.||+++... .+.|+++++++...+.+. ..+..|+|+++
T Consensus 108 g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~----------------~~~I~~~~~dG~~~~~~~~~~~~~P~gla~ 171 (316)
T 1ijq_A 108 GVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGT----------------PAKIKKGGLNGVDIYSLVTENIQWPNGITL 171 (316)
T ss_dssp SSSEEEEEECTTCCEEEEEEETTTTEEEEEECSS----------------SCEEEEEETTSCCEEEEECSSCSCEEEEEE
T ss_pred CCceEEEEECCCCCcceEEeCCCCCEEEEEccCC----------------CCeEEEEcCCCCCeEEEEECCCCCceEEEE
Confidence 5 444433 447899999997 67999998641 358999998766555543 46788999999
Q ss_pred eCCCCEEEEEeCCCCeEEEEEeCCCCCcceeEeccc--CCCCcCceEECCCCCEEEEeec
Q 018474 198 SKNEDFVVVCESWKFRCRRYWLKGDRAGILDAFIEN--LPGGPDNINLAPDGSFWIGLIK 255 (355)
Q Consensus 198 ~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~g~p~~i~~d~~G~lwv~~~~ 255 (355)
+++++.+||+++..++|.+++++|.. .+.+... ....|+++++|. |++|++...
T Consensus 172 d~~~~~lY~~D~~~~~I~~~d~dg~~---~~~~~~~~~~~~~P~giav~~-~~ly~~d~~ 227 (316)
T 1ijq_A 172 DLLSGRLYWVDSKLHSISSIDVNGGN---RKTILEDEKRLAHPFSLAVFE-DKVFWTDII 227 (316)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSCS---CEEEEECTTTTSSEEEEEEET-TEEEEEETT
T ss_pred eccCCEEEEEECCCCeEEEEecCCCc---eEEEeecCCccCCcEEEEEEC-CEEEEEECC
Confidence 99988999999999999999997632 3334322 234699999985 789998865
No 30
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.76 E-value=6.3e-16 Score=137.07 Aligned_cols=220 Identities=14% Similarity=0.139 Sum_probs=156.5
Q ss_pred eEEEEecCCEEEEEEcCCCeeE-----E-eeccCCCcccCeEECC-CCCEEEEeCCC-cEEEEcCCC--eEEEc-CCcCC
Q 018474 65 ALYTATRDGWVKYFILHNETLV-----N-WKHIDSQSLLGLTTTK-DGGVILCDNEK-GLLKVTEEG--VEAIV-PDASF 133 (355)
Q Consensus 65 ~l~~~~~~g~i~~~~~~~g~~~-----~-~~~~~~~p~~gl~~d~-~g~L~v~~~~~-gl~~~~~~g--~~~~~-~~~~~ 133 (355)
.||++.. +.|++++...+... . +.....+|. ++++|+ +++||+++... .+++++.+| .+.+. .....
T Consensus 3 ~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~-gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~ 80 (267)
T 1npe_A 3 HLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVII-GLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGS 80 (267)
T ss_dssp EEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEE-EEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCC
T ss_pred EEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEE-EEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCC
Confidence 5666654 57999998544321 1 111224688 999997 57899999764 588888644 44433 33468
Q ss_pred cccEEEccC-CcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEee-ccccccccEEEeCCCCEEEEEeCC-
Q 018474 134 TNDVIAASD-GTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH-EGFYFANGIALSKNEDFVVVCESW- 210 (355)
Q Consensus 134 ~~~l~~d~d-G~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~-~~~~~pngi~~~~dg~~l~v~~~~- 210 (355)
|+++++|++ |+||+++.. .+.+.++++++...+.+. .++..|+++++++++..+||++..
T Consensus 81 p~~ia~d~~~~~lyv~d~~-----------------~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~ 143 (267)
T 1npe_A 81 PEGIALDHLGRTIFWTDSQ-----------------LDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNR 143 (267)
T ss_dssp EEEEEEETTTTEEEEEETT-----------------TTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCS
T ss_pred ccEEEEEecCCeEEEEECC-----------------CCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCC
Confidence 999999985 699999865 457999998765444443 345789999999988889999976
Q ss_pred -CCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCC-CEEEEeecCCchhhHhhhcchhHHHHHHhccchhhcccCCC
Q 018474 211 -KFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDG-SFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMG 288 (355)
Q Consensus 211 -~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G-~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (355)
.++|+++++++... +.+.......|.++++|++| ++|++....
T Consensus 144 ~~~~I~~~~~dg~~~---~~~~~~~~~~P~gia~d~~~~~lyv~d~~~-------------------------------- 188 (267)
T 1npe_A 144 DNPKIETSHMDGTNR---RILAQDNLGLPNGLTFDAFSSQLCWVDAGT-------------------------------- 188 (267)
T ss_dssp SSCEEEEEETTSCCC---EEEECTTCSCEEEEEEETTTTEEEEEETTT--------------------------------
T ss_pred CCcEEEEEecCCCCc---EEEEECCCCCCcEEEEcCCCCEEEEEECCC--------------------------------
Confidence 57999999876422 22322222469999999864 799988652
Q ss_pred CCCceEEEEEeCCCCeEEEEEECCCCCcccceeEEEEeCCEEEEeecCCCeEEEeeCCC
Q 018474 289 SDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFDGNLYLASLQSNFIGILPLDG 347 (355)
Q Consensus 289 ~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~~~i~~~~~~~ 347 (355)
+.|.++++ +|.....+.. + ...+.+++.++++||+++..++.|.+++..+
T Consensus 189 ----~~I~~~~~-~g~~~~~~~~--~--~~~P~gi~~d~~~lyva~~~~~~v~~~d~~~ 238 (267)
T 1npe_A 189 ----HRAECLNP-AQPGRRKVLE--G--LQYPFAVTSYGKNLYYTDWKTNSVIAMDLAI 238 (267)
T ss_dssp ----TEEEEEET-TEEEEEEEEE--C--CCSEEEEEEETTEEEEEETTTTEEEEEETTT
T ss_pred ----CEEEEEec-CCCceEEEec--C--CCCceEEEEeCCEEEEEECCCCeEEEEeCCC
Confidence 46999999 7765444432 2 2245567778999999999999999999764
No 31
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.76 E-value=7.9e-16 Score=140.21 Aligned_cols=222 Identities=14% Similarity=0.138 Sum_probs=161.5
Q ss_pred eEEEEecCCEEEEEEcCCCeeEEeeccCCCcccCeEECC-CCCEEEEeCC-CcEEEEcC-C----C-eEEE-cCCcCCcc
Q 018474 65 ALYTATRDGWVKYFILHNETLVNWKHIDSQSLLGLTTTK-DGGVILCDNE-KGLLKVTE-E----G-VEAI-VPDASFTN 135 (355)
Q Consensus 65 ~l~~~~~~g~i~~~~~~~g~~~~~~~~~~~p~~gl~~d~-~g~L~v~~~~-~gl~~~~~-~----g-~~~~-~~~~~~~~ 135 (355)
.|+++.. ..|.+++..+++...+......|. ++++|+ +++||+++.. +.|++++. . . .+.+ ......|.
T Consensus 3 ~ll~~~~-~~I~~i~~~~~~~~~~~~~~~~p~-g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~ 80 (316)
T 1ijq_A 3 YLFFTNR-HEVRKMTLDRSEYTSLIPNLRNVV-ALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 80 (316)
T ss_dssp EEEEECB-SSEEEEETTSCCCEEEECSCSSEE-EEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC
T ss_pred EEEEECC-CeEEEEECCCcceEehhcCCCceE-EEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcC
Confidence 3555554 459999997776666555567799 999996 5789999976 45888874 3 2 3333 33346899
Q ss_pred cEEEcc-CCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEee-ccccccccEEEeCCCCEEEEEeCCC-C
Q 018474 136 DVIAAS-DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH-EGFYFANGIALSKNEDFVVVCESWK-F 212 (355)
Q Consensus 136 ~l~~d~-dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~-~~~~~pngi~~~~dg~~l~v~~~~~-~ 212 (355)
++++|+ +|+||++|.. .+.|.++++++...+.+. ..+..|++++++|++..+||++... +
T Consensus 81 glavd~~~~~ly~~d~~-----------------~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~ 143 (316)
T 1ijq_A 81 GLAVDWIHSNIYWTDSV-----------------LGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPA 143 (316)
T ss_dssp EEEEETTTTEEEEEETT-----------------TTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSC
T ss_pred EEEEeecCCeEEEEECC-----------------CCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCC
Confidence 999996 6799999876 468999998776655554 3678899999999888899999875 7
Q ss_pred eEEEEEeCCCCCcceeEecccCCCCcCceEECC-CCCEEEEeecCCchhhHhhhcchhHHHHHHhccchhhcccCCCCCC
Q 018474 213 RCRRYWLKGDRAGILDAFIENLPGGPDNINLAP-DGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDA 291 (355)
Q Consensus 213 ~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~-~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (355)
+|++++++|.. .+.+....-..|.++++|. ++++|++....
T Consensus 144 ~I~~~~~dG~~---~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~----------------------------------- 185 (316)
T 1ijq_A 144 KIKKGGLNGVD---IYSLVTENIQWPNGITLDLLSGRLYWVDSKL----------------------------------- 185 (316)
T ss_dssp EEEEEETTSCC---EEEEECSSCSCEEEEEEETTTTEEEEEETTT-----------------------------------
T ss_pred eEEEEcCCCCC---eEEEEECCCCCceEEEEeccCCEEEEEECCC-----------------------------------
Confidence 99999987642 2233322234699999995 46899988542
Q ss_pred ceEEEEEeCCCCeEEEEEECCCCCcccceeEEEEeCCEEEEeecCCCeEEEeeCC
Q 018474 292 GARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFDGNLYLASLQSNFIGILPLD 346 (355)
Q Consensus 292 ~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~~~i~~~~~~ 346 (355)
..|.+++. +|...+.+....+. ...+.+++.++++||++...+++|.+++..
T Consensus 186 -~~I~~~d~-dg~~~~~~~~~~~~-~~~P~giav~~~~ly~~d~~~~~V~~~~~~ 237 (316)
T 1ijq_A 186 -HSISSIDV-NGGNRKTILEDEKR-LAHPFSLAVFEDKVFWTDIINEAIFSANRL 237 (316)
T ss_dssp -TEEEEEET-TSCSCEEEEECTTT-TSSEEEEEEETTEEEEEETTTTEEEEEETT
T ss_pred -CeEEEEec-CCCceEEEeecCCc-cCCcEEEEEECCEEEEEECCCCeEEEEeCC
Confidence 46999999 77655544332111 335667777889999999999999999863
No 32
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.75 E-value=1.9e-15 Score=138.20 Aligned_cols=239 Identities=14% Similarity=0.123 Sum_probs=168.1
Q ss_pred CCCceEEEeeCCCeEEEEec-------CCEEEEEEcCCCeeEEeeccCCCcccCeEECCCCC-EEEEeCC-CcEEEEcC-
Q 018474 52 NHPEDVSVVVSKGALYTATR-------DGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGG-VILCDNE-KGLLKVTE- 121 (355)
Q Consensus 52 ~~p~~i~~d~~~g~l~~~~~-------~g~i~~~~~~~g~~~~~~~~~~~p~~gl~~d~~g~-L~v~~~~-~gl~~~~~- 121 (355)
.+|.+++++++++.+|+++. ++.|+.+|..+++.......+..|. +++++++|+ +|++... +.+..++.
T Consensus 41 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~v~~~~~~~v~~~d~~ 119 (353)
T 3vgz_A 41 KGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPF-GATINNTTQTLWFGNTVNSAVTAIDAK 119 (353)
T ss_dssp SSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCCC-SEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred cCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCcc-eEEECCCCCEEEEEecCCCEEEEEeCC
Confidence 67899999987789999874 4579999998887665545556788 999999987 8998875 45777774
Q ss_pred CC--eEEEcCCc---------CCcccEEEccCC-cEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeec-c
Q 018474 122 EG--VEAIVPDA---------SFTNDVIAASDG-TLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHE-G 188 (355)
Q Consensus 122 ~g--~~~~~~~~---------~~~~~l~~d~dG-~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~-~ 188 (355)
++ ...+.... ..|++++++++| .+|+++.. ..+.++.||+++++...... .
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~----------------~~~~i~~~d~~~~~~~~~~~~~ 183 (353)
T 3vgz_A 120 TGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIG----------------KESVIWVVDGGNIKLKTAIQNT 183 (353)
T ss_dssp TCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEES----------------SSCEEEEEETTTTEEEEEECCC
T ss_pred CCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecC----------------CCceEEEEcCCCCceEEEecCC
Confidence 56 34443321 137889999998 48887632 14579999998887765554 3
Q ss_pred ccccccEEEeCCCCEEEEEeCCCCeEEEEEeCCCCCcceeEecc-cCCCCcCceEECCCCC-EEEEeecCCchhhHhhhc
Q 018474 189 FYFANGIALSKNEDFVVVCESWKFRCRRYWLKGDRAGILDAFIE-NLPGGPDNINLAPDGS-FWIGLIKMNQTGVRAIQK 266 (355)
Q Consensus 189 ~~~pngi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~g~p~~i~~d~~G~-lwv~~~~~~~~~~~~~~~ 266 (355)
...|++++++||++.+|+++. .+.|..++....+......... .....+.++.++++|+ +|++....
T Consensus 184 ~~~~~~~~~s~dg~~l~~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~---------- 252 (353)
T 3vgz_A 184 GKMSTGLALDSEGKRLYTTNA-DGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKA---------- 252 (353)
T ss_dssp CTTCCCCEEETTTTEEEEECT-TSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSS----------
T ss_pred CCccceEEECCCCCEEEEEcC-CCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCC----------
Confidence 455899999999999999875 6789999975432211111111 1223466789999997 77776431
Q ss_pred chhHHHHHHhccchhhcccCCCCCCceEEEEEeCCCCeEEEEEECCCCCcccceeEEEEeCCEEEEeecCCCeEEEeeCC
Q 018474 267 CREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFDGNLYLASLQSNFIGILPLD 346 (355)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~~~i~~~~~~ 346 (355)
+.|..+|.++++....+..+.. ....+..++++||+++...+.|.++++.
T Consensus 253 --------------------------~~v~~~d~~~~~~~~~~~~~~~----~~~~~s~dg~~l~v~~~~~~~v~~~d~~ 302 (353)
T 3vgz_A 253 --------------------------AEVLVVDTRNGNILAKVAAPES----LAVLFNPARNEAYVTHRQAGKVSVIDAK 302 (353)
T ss_dssp --------------------------SEEEEEETTTCCEEEEEECSSC----CCEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred --------------------------CEEEEEECCCCcEEEEEEcCCC----ceEEECCCCCEEEEEECCCCeEEEEECC
Confidence 4689999877888777765432 1111222346799999889999999876
Q ss_pred CC
Q 018474 347 GP 348 (355)
Q Consensus 347 ~~ 348 (355)
+.
T Consensus 303 ~~ 304 (353)
T 3vgz_A 303 SY 304 (353)
T ss_dssp TT
T ss_pred CC
Confidence 53
No 33
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.75 E-value=2.6e-16 Score=139.00 Aligned_cols=184 Identities=14% Similarity=0.181 Sum_probs=136.0
Q ss_pred CCCCCCceEEEeeCCCeEEEEecCCEEEEEEcCCCeeEEeeccC-CCcccCeEECCCCCEEEEeCC-CcEEEEcC-CC-e
Q 018474 49 GCVNHPEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHID-SQSLLGLTTTKDGGVILCDNE-KGLLKVTE-EG-V 124 (355)
Q Consensus 49 ~~~~~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~~~~~-~~p~~gl~~d~~g~L~v~~~~-~gl~~~~~-~g-~ 124 (355)
.....|.+|+++ .++.+|++..+++|+++++.++....+.... ..|. ++++|++|+||+++.. +++++++. +. .
T Consensus 64 ~~~~~p~~i~~~-~~g~l~v~~~~~~i~~~d~~~~~~~~~~~~~~~~p~-~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~ 141 (270)
T 1rwi_B 64 NGLYQPQGLAVD-GAGTVYVTDFNNRVVTLAAGSNNQTVLPFDGLNYPE-GLAVDTQGAVYVADRGNNRVVKLAAGSKTQ 141 (270)
T ss_dssp CSCCSCCCEEEC-TTCCEEEEETTTEEEEECTTCSCCEECCCCSCSSEE-EEEECTTCCEEEEEGGGTEEEEECTTCCSC
T ss_pred CCcCCcceeEEC-CCCCEEEEcCCCEEEEEeCCCceEeeeecCCcCCCc-ceEECCCCCEEEEECCCCEEEEEECCCcee
Confidence 335689999999 5677999887889999998666555443222 5688 9999999999999865 45888874 33 3
Q ss_pred EEEc-CCcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEee-ccccccccEEEeCCCC
Q 018474 125 EAIV-PDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH-EGFYFANGIALSKNED 202 (355)
Q Consensus 125 ~~~~-~~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~-~~~~~pngi~~~~dg~ 202 (355)
.... .....|++++++++|++|+++.. .+.+++||++++...... ..+..|.+++++++|+
T Consensus 142 ~~~~~~~~~~p~~i~~~~~g~l~v~~~~-----------------~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~ 204 (270)
T 1rwi_B 142 TVLPFTGLNDPDGVAVDNSGNVYVTDTD-----------------NNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGT 204 (270)
T ss_dssp EECCCCSCCSCCCEEECTTCCEEEEEGG-----------------GTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCC
T ss_pred EeeccccCCCceeEEEeCCCCEEEEECC-----------------CCEEEEEecCCCceEeecccCCCCceEEEECCCCC
Confidence 2222 22268999999999999999754 458999999877654432 3446799999999995
Q ss_pred EEEEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCCEEEEeec
Q 018474 203 FVVVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIK 255 (355)
Q Consensus 203 ~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~ 255 (355)
+|+++...++|.+++.++... ..........|.++++|++|++|+++..
T Consensus 205 -l~v~~~~~~~v~~~~~~~~~~---~~~~~~~~~~p~~i~~~~~g~l~v~~~~ 253 (270)
T 1rwi_B 205 -VYVTEHNTNQVVKLLAGSTTS---TVLPFTGLNTPLAVAVDSDRTVYVADRG 253 (270)
T ss_dssp -EEEEETTTSCEEEECTTCSCC---EECCCCSCSCEEEEEECTTCCEEEEEGG
T ss_pred -EEEEECCCCcEEEEcCCCCcc---eeeccCCCCCceeEEECCCCCEEEEECC
Confidence 999998888999999865322 1111111135889999999999999865
No 34
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.75 E-value=4.7e-16 Score=158.89 Aligned_cols=224 Identities=15% Similarity=0.192 Sum_probs=162.2
Q ss_pred CceEEEeeCCCe-EEEEecCCEEEEEEcCCCeeEEeecc-----CCCcccCeEECCCCCEEEEeCCCcEEEEcC-CC-eE
Q 018474 54 PEDVSVVVSKGA-LYTATRDGWVKYFILHNETLVNWKHI-----DSQSLLGLTTTKDGGVILCDNEKGLLKVTE-EG-VE 125 (355)
Q Consensus 54 p~~i~~d~~~g~-l~~~~~~g~i~~~~~~~g~~~~~~~~-----~~~p~~gl~~d~~g~L~v~~~~~gl~~~~~-~g-~~ 125 (355)
..+++.| .++. ||+++.+++|+++++++++++.+... ...+. +++.|++|+||+++. .|++++++ ++ .+
T Consensus 408 v~~i~~d-~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~-~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~ 484 (795)
T 4a2l_A 408 IKAVYVD-EKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVY-AILPDGEGNLWLGTL-SALVRFNPEQRSFT 484 (795)
T ss_dssp EEEEEEE-TTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEE-EEEECSSSCEEEEES-SCEEEEETTTTEEE
T ss_pred EEEEEEc-CCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeE-EEEECCCCCEEEEec-CceeEEeCCCCeEE
Confidence 3477888 6777 99999988899999988888877531 23467 889999999999997 79999995 66 65
Q ss_pred EEcCC-------cCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeec-----cc--cc
Q 018474 126 AIVPD-------ASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHE-----GF--YF 191 (355)
Q Consensus 126 ~~~~~-------~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~-----~~--~~ 191 (355)
.+... ...++++..|++|+||+++. ++|++||++++++ .+.. .+ ..
T Consensus 485 ~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-------------------~Gl~~~~~~~~~~-~~~~~~~~~~l~~~~ 544 (795)
T 4a2l_A 485 TIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-------------------EGLSVFKQEGLDI-QKASILPVSNVTKLF 544 (795)
T ss_dssp ECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-------------------SCEEEEEEETTEE-EECCCSCSCGGGGSC
T ss_pred EccccccccccCCceEEEEEECCCCCEEEEeC-------------------CceEEEeCCCCeE-EEecCCCCCCCCCCe
Confidence 54321 15678899999999999853 3799999888776 3321 11 12
Q ss_pred cccEEEeCCCCEEEEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCc----eEECCCCCEEEEeecCCchhhHhhhcc
Q 018474 192 ANGIALSKNEDFVVVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDN----INLAPDGSFWIGLIKMNQTGVRAIQKC 267 (355)
Q Consensus 192 pngi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~----i~~d~~G~lwv~~~~~~~~~~~~~~~~ 267 (355)
.+.++.+++|+ +|++.. ++|.+|+.++. .++.+. ...++|++ +..|++|++|+++..
T Consensus 545 i~~i~~d~~g~-lWigT~--~Gl~~~d~~~~---~~~~~~-~~~gl~~~~i~~i~~d~~g~lWi~t~~------------ 605 (795)
T 4a2l_A 545 TNCIYEASNGI-IWVGTR--EGFYCFNEKDK---QIKRYN-TTNGLPNNVVYGILEDSFGRLWLSTNR------------ 605 (795)
T ss_dssp EEEEEECTTSC-EEEEES--SCEEEEETTTT---EEEEEC-GGGTCSCSCEEEEEECTTSCEEEEETT------------
T ss_pred eEEEEECCCCC-EEEEeC--CCceeECCCCC---cEEEeC-CCCCCchhheEEEEECCCCCEEEEcCC------------
Confidence 34577778887 787754 38999997543 333332 22345554 678999999999954
Q ss_pred hhHHHHHHhccchhhcccCCCCCCceEEEEEeCCCCeEEEEEECCCCCcccce--eEEEE-eCCEEEEeecCCCeEEEee
Q 018474 268 REKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFV--TSAAE-FDGNLYLASLQSNFIGILP 344 (355)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~--~~~~~-~~g~L~v~~~~~~~i~~~~ 344 (355)
|+.+|+| +.+.+..|...+|+....+ .+++. .+|+||+|+. +.+.++.
T Consensus 606 --------------------------Gl~~~~~-~~~~~~~~~~~dGl~~~~f~~~~~~~~~~G~l~~g~~--~Gl~~~~ 656 (795)
T 4a2l_A 606 --------------------------GISCFNP-ETEKFRNFTESDGLQSNQFNTASYCRTSVGQMYFGGI--NGITTFR 656 (795)
T ss_dssp --------------------------EEEEEET-TTTEEEEECGGGTCSCSCEEEEEEEECTTSCEEEEET--TEEEEEC
T ss_pred --------------------------ceEEEcC-CCCcEEEcCCcCCCccccCccCceeECCCCeEEEecC--CceEEEc
Confidence 7999999 7677888988788655544 34444 4699999996 5688877
Q ss_pred CCCC
Q 018474 345 LDGP 348 (355)
Q Consensus 345 ~~~~ 348 (355)
....
T Consensus 657 p~~~ 660 (795)
T 4a2l_A 657 PELL 660 (795)
T ss_dssp GGGC
T ss_pred HHHc
Confidence 5543
No 35
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.75 E-value=2.5e-16 Score=160.56 Aligned_cols=231 Identities=14% Similarity=0.162 Sum_probs=164.0
Q ss_pred CceEEEeeCCCeEEEEecCCEEEEEEcCCCeeEEeecc----------CCCcccCeEECCCCCEEEEeCCCcEEEEcC-C
Q 018474 54 PEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHI----------DSQSLLGLTTTKDGGVILCDNEKGLLKVTE-E 122 (355)
Q Consensus 54 p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~~~~----------~~~p~~gl~~d~~g~L~v~~~~~gl~~~~~-~ 122 (355)
..+|..| .+|.+|+++.+++|.++++.++.++.+... ...+. +++.|++|+||+++..+||+++++ +
T Consensus 315 v~~i~~D-~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~-~i~~d~~g~lWigt~~~Gl~~~~~~~ 392 (781)
T 3v9f_A 315 ARYIFQD-SFNNIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVS-SVCDDGQGKLWIGTDGGGINVFENGK 392 (781)
T ss_dssp EEEEEEC-SSCCEEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEE-EEEECTTSCEEEEEBSSCEEEEETTE
T ss_pred EEEEEEe-CCCCEEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceE-EEEEcCCCCEEEEeCCCcEEEEECCC
Confidence 4578889 788999999888899999987777666321 13466 788999999999997789999995 4
Q ss_pred C-eEEEcC--C--cCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeecc-c--ccccc
Q 018474 123 G-VEAIVP--D--ASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEG-F--YFANG 194 (355)
Q Consensus 123 g-~~~~~~--~--~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~-~--~~png 194 (355)
+ .+.+.. . ...+.+++.|++|+||++.. .+++++||+++++++.+... + .....
T Consensus 393 ~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigt~------------------~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~ 454 (781)
T 3v9f_A 393 RVAIYNKENRELLSNSVLCSLKDSEGNLWFGTY------------------LGNISYYNTRLKKFQIIELEKNELLDVRV 454 (781)
T ss_dssp EEEECC-----CCCSBEEEEEECTTSCEEEEET------------------TEEEEEECSSSCEEEECCSTTTCCCCEEE
T ss_pred CeEEEccCCCCCCCcceEEEEECCCCCEEEEec------------------cCCEEEEcCCCCcEEEeccCCCCCCeEEE
Confidence 4 443321 1 15678899999999999853 35899999988888766432 1 22345
Q ss_pred EEEeCCCCEEEEEeCCCCeEEEEEeCCCCCcceeEecc-cC-CCCcCceEECCCCCEEEEeecCCchhhHhhhcchhHHH
Q 018474 195 IALSKNEDFVVVCESWKFRCRRYWLKGDRAGILDAFIE-NL-PGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWE 272 (355)
Q Consensus 195 i~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~-~~-~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~ 272 (355)
++.+++|+ +|++.. ++|.+|+.++........... .. ......+..|++|++|+++..
T Consensus 455 i~~d~~g~-lwigt~--~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~----------------- 514 (781)
T 3v9f_A 455 FYEDKNKK-IWIGTH--AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFG----------------- 514 (781)
T ss_dssp EEECTTSE-EEEEET--TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESS-----------------
T ss_pred EEECCCCC-EEEEEC--CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcC-----------------
Confidence 66777775 888754 799999976543322211000 00 123445778999999999964
Q ss_pred HHHhccchhhcccCCCCCCceEEEEEeCCCCeEEEEEECCCCCcccceeEEEEe-CCEEEEeecCCCeE-EEeeCCC
Q 018474 273 LLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF-DGNLYLASLQSNFI-GILPLDG 347 (355)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-~g~L~v~~~~~~~i-~~~~~~~ 347 (355)
+|++++++ +++.+..|..++++..+.+..++++ +|+||+++. ..+ .+++..+
T Consensus 515 --------------------~Gl~~~~~-~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~--~Glv~~~d~~~ 568 (781)
T 3v9f_A 515 --------------------GGVGIYTP-DMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLATG--EGLVCFPSARN 568 (781)
T ss_dssp --------------------SCEEEECT-TCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEET--TEEEEESCTTT
T ss_pred --------------------CCEEEEeC-CCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEEC--CCceEEECCCC
Confidence 36999999 7777788877777666677888876 599999997 456 7776543
No 36
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.74 E-value=2.7e-16 Score=160.35 Aligned_cols=225 Identities=13% Similarity=0.112 Sum_probs=163.4
Q ss_pred CceEEEeeCCCeEEEEecCCEEEEEEcCCCeeEEeecc---CCCcccCeEECCCCCEEEEeCCCcEEEEcC-CC-eEEEc
Q 018474 54 PEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHI---DSQSLLGLTTTKDGGVILCDNEKGLLKVTE-EG-VEAIV 128 (355)
Q Consensus 54 p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~~~~---~~~p~~gl~~d~~g~L~v~~~~~gl~~~~~-~g-~~~~~ 128 (355)
..+|+.| .++.||+++.+++|+++++++++++.+... ...+. +++.|++|+||+++. .||+++++ ++ ++.+.
T Consensus 409 v~~i~~d-~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~-~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~~~~ 485 (781)
T 3v9f_A 409 VLCSLKD-SEGNLWFGTYLGNISYYNTRLKKFQIIELEKNELLDVR-VFYEDKNKKIWIGTH-AGVFVIDLASKKVIHHY 485 (781)
T ss_dssp EEEEEEC-TTSCEEEEETTEEEEEECSSSCEEEECCSTTTCCCCEE-EEEECTTSEEEEEET-TEEEEEESSSSSCCEEE
T ss_pred eEEEEEC-CCCCEEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEE-EEEECCCCCEEEEEC-CceEEEeCCCCeEEecc
Confidence 3567778 688999999888899999988888877532 24567 889999999999997 79999995 55 54433
Q ss_pred C-C-----cCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeecccc----ccccEEEe
Q 018474 129 P-D-----ASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFY----FANGIALS 198 (355)
Q Consensus 129 ~-~-----~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~~~----~pngi~~~ 198 (355)
. . ...+++++.|++|+||+++.. ++|++||+++++++.+..... ....++.+
T Consensus 486 ~~~~~~~~~~~i~~i~~d~~g~lWigt~~------------------~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d 547 (781)
T 3v9f_A 486 DTSNSQLLENFVRSIAQDSEGRFWIGTFG------------------GGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRS 547 (781)
T ss_dssp CTTTSSCSCSCEEEEEECTTCCEEEEESS------------------SCEEEECTTCCEEEEECTTTTCSCSCEEEEEEC
T ss_pred cCcccccccceeEEEEEcCCCCEEEEEcC------------------CCEEEEeCCCCeEEEccCCCCCCCCeeEEEEEC
Confidence 2 1 156888999999999998642 469999998888877643221 22457777
Q ss_pred CCCCEEEEEeCCCCeE-EEEEeCCCCCcceeEecccCCCCc----CceEECCCCCEEEEeecCCchhhHhhhcchhHHHH
Q 018474 199 KNEDFVVVCESWKFRC-RRYWLKGDRAGILDAFIENLPGGP----DNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWEL 273 (355)
Q Consensus 199 ~dg~~l~v~~~~~~~i-~~~~~~~~~~~~~~~~~~~~~g~p----~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~ 273 (355)
++|+ +|++.. +++ .+|+.++.+ ++.+. ...++| .++..|++|+||+++..
T Consensus 548 ~~g~-lWi~T~--~Glv~~~d~~~~~---~~~~~-~~~gl~~~~i~~i~~d~~g~lW~~t~~------------------ 602 (781)
T 3v9f_A 548 SKGQ-MWLATG--EGLVCFPSARNFD---YQVFQ-RKEGLPNTHIRAISEDKNGNIWASTNT------------------ 602 (781)
T ss_dssp TTSC-EEEEET--TEEEEESCTTTCC---CEEEC-GGGTCSCCCCCEEEECSSSCEEEECSS------------------
T ss_pred CCCC-EEEEEC--CCceEEECCCCCc---EEEcc-ccCCCCCceEEEEEECCCCCEEEEcCC------------------
Confidence 8887 787754 677 998875433 33332 122333 35788999999999854
Q ss_pred HHhccchhhcccCCCCCCceEEEEEeCCCCeEEEEEECCCCCcccce--eEEEEe-CCEEEEeecCCCeEEEeeCCC
Q 018474 274 LDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFV--TSAAEF-DGNLYLASLQSNFIGILPLDG 347 (355)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~--~~~~~~-~g~L~v~~~~~~~i~~~~~~~ 347 (355)
|+.+|+| +.+.+..|...+|+..... .+++.. +|+||+|+. +.+.+++...
T Consensus 603 --------------------Gl~~~~~-~~~~~~~~~~~dGl~~~~f~~~~~~~~~~G~l~~g~~--~Gl~~f~p~~ 656 (781)
T 3v9f_A 603 --------------------GISCYIT-SKKCFYTYDHSNNIPQGSFISGCVTKDHNGLIYFGSI--NGLCFFNPDI 656 (781)
T ss_dssp --------------------CEEEEET-TTTEEEEECGGGTCCSSCEEEEEEEECTTSCEEEEET--TEEEEECSCC
T ss_pred --------------------ceEEEEC-CCCceEEecccCCccccccccCceEECCCCEEEEECC--CceEEEChhh
Confidence 6999999 7777889987788654433 234444 699999996 4688887554
No 37
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.74 E-value=4.5e-16 Score=141.88 Aligned_cols=184 Identities=13% Similarity=0.125 Sum_probs=136.3
Q ss_pred CCCCceEEEeeCCCeEEEEe-cCCEEEEEEcCCCee--EEeeccCCCcccCeEECC-CCCEEEEeCCC-cEEEEcCCC--
Q 018474 51 VNHPEDVSVVVSKGALYTAT-RDGWVKYFILHNETL--VNWKHIDSQSLLGLTTTK-DGGVILCDNEK-GLLKVTEEG-- 123 (355)
Q Consensus 51 ~~~p~~i~~d~~~g~l~~~~-~~g~i~~~~~~~g~~--~~~~~~~~~p~~gl~~d~-~g~L~v~~~~~-gl~~~~~~g-- 123 (355)
+..|.++.+++.++.||.+. .+++|+++++.++.. .........|. |+++|. .|+||+++... .|.+++.+|
T Consensus 34 ~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~-glavd~~~g~ly~~d~~~~~I~~~~~dG~~ 112 (318)
T 3sov_A 34 LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPD-GLACDWLGEKLYWTDSETNRIEVSNLDGSL 112 (318)
T ss_dssp EEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCC-EEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred CCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCcc-EEEEEcCCCeEEEEECCCCEEEEEECCCCc
Confidence 56788999997678887765 478999999865532 22223335788 999995 78899999764 577777666
Q ss_pred eEEEc-CCcCCcccEEEcc-CCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEe-eccccccccEEEeCC
Q 018474 124 VEAIV-PDASFTNDVIAAS-DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVL-HEGFYFANGIALSKN 200 (355)
Q Consensus 124 ~~~~~-~~~~~~~~l~~d~-dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~-~~~~~~pngi~~~~d 200 (355)
.+.+. .....|+++++|+ .|.||++|.. ..+.|+++++++...+.+ ..++..|||++++++
T Consensus 113 ~~~l~~~~~~~P~giavdp~~g~ly~td~~----------------~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~ 176 (318)
T 3sov_A 113 RKVLFWQELDQPRAIALDPSSGFMYWTDWG----------------EVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYE 176 (318)
T ss_dssp CEEEECSSCSSEEEEEEEGGGTEEEEEECS----------------SSCEEEEEETTSCSCEEEECSSCSCEEEEEEETT
T ss_pred EEEEEeCCCCCccEEEEeCCCCEEEEEecC----------------CCCEEEEEEcCCCCeEEEEECCCCCccEEEEecc
Confidence 45444 4447899999997 5799999854 145899999876554444 356788999999998
Q ss_pred CCEEEEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCCEEEEeec
Q 018474 201 EDFVVVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIK 255 (355)
Q Consensus 201 g~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~ 255 (355)
++.|||+++..++|++++++|. ..+.+.....+.|+++++|. +.+|++...
T Consensus 177 ~~~lY~aD~~~~~I~~~d~dG~---~~~~~~~~~~~~P~glav~~-~~lywtd~~ 227 (318)
T 3sov_A 177 EQKLYWADAKLNFIHKSNLDGT---NRQAVVKGSLPHPFALTLFE-DILYWTDWS 227 (318)
T ss_dssp TTEEEEEETTTTEEEEEETTSC---SCEEEECSCCSCEEEEEEET-TEEEEEETT
T ss_pred CCEEEEEECCCCEEEEEcCCCC---ceEEEecCCCCCceEEEEeC-CEEEEEecC
Confidence 8899999999999999999763 23344433345799999986 457776654
No 38
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.73 E-value=1e-15 Score=151.75 Aligned_cols=189 Identities=11% Similarity=0.079 Sum_probs=146.7
Q ss_pred EecCCCCCCCceEEEeeCCCeEEEEec-CCEEEEEEcCCCeeEEeeccC-CCcccCeEECC-CCCEEEEeCCCc-EEEEc
Q 018474 45 KLGEGCVNHPEDVSVVVSKGALYTATR-DGWVKYFILHNETLVNWKHID-SQSLLGLTTTK-DGGVILCDNEKG-LLKVT 120 (355)
Q Consensus 45 ~~~~~~~~~p~~i~~d~~~g~l~~~~~-~g~i~~~~~~~g~~~~~~~~~-~~p~~gl~~d~-~g~L~v~~~~~g-l~~~~ 120 (355)
.++...+..|.+|++|+.++.+|++.. +++|+++++.....+.+...+ ..|. ||++|. .++||+++...+ |.+++
T Consensus 30 ~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~-GlAvD~~~~~LY~tD~~~~~I~v~~ 108 (628)
T 4a0p_A 30 AIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPE-GMAVDWLGKNLYWADTGTNRIEVSK 108 (628)
T ss_dssp ECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCC-EEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcc-eEEEEeCCCEEEEEECCCCEEEEEe
Confidence 344455788999999987888887654 789999998554444444433 5799 999995 578999998754 66667
Q ss_pred CCC--eEEEc-CCcCCcccEEEcc-CCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeeccccccccEE
Q 018474 121 EEG--VEAIV-PDASFTNDVIAAS-DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYFANGIA 196 (355)
Q Consensus 121 ~~g--~~~~~-~~~~~~~~l~~d~-dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~~~~pngi~ 196 (355)
.+| .+.+. .....|++|++|| +|.||++|... .++|++.++++...+.+..++..|+||+
T Consensus 109 ~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~----------------~~~I~r~~~dG~~~~~l~~~~~~P~Gla 172 (628)
T 4a0p_A 109 LDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGG----------------KPKIDRAAMDGSERTTLVPNVGRANGLT 172 (628)
T ss_dssp TTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSS----------------SCEEEEEETTSCSCEEEECSCSSEEEEE
T ss_pred cCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCC----------------CCEEEEEeCCCCceEEEECCCCCcceEE
Confidence 666 55554 4458899999997 68999998641 4589999998777777778889999999
Q ss_pred EeCCCCEEEEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCCEEEEeec
Q 018474 197 LSKNEDFVVVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIK 255 (355)
Q Consensus 197 ~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~ 255 (355)
++++++.|||+++..++|.+++++|... +.+.+.+ ..|.+++++. +++|+++..
T Consensus 173 lD~~~~~LY~aD~~~~~I~~~d~dG~~~---~v~~~~l-~~P~glav~~-~~ly~tD~~ 226 (628)
T 4a0p_A 173 IDYAKRRLYWTDLDTNLIESSNMLGLNR---EVIADDL-PHPFGLTQYQ-DYIYWTDWS 226 (628)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSCSC---EEEEECC-SCEEEEEEET-TEEEEEETT
T ss_pred EccccCEEEEEECCCCEEEEEcCCCCce---EEeeccC-CCceEEEEEC-CEEEEecCC
Confidence 9999889999999999999999987432 3444333 4699999986 789998865
No 39
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.72 E-value=1.6e-15 Score=138.77 Aligned_cols=231 Identities=9% Similarity=-0.006 Sum_probs=163.4
Q ss_pred CCCceEEEeeCCCeEEEEec-CCEEEEEEcCCCeeEEeeccCCCcccCeEECCCCCEEEEe-CCCcEEEEcC-CC-e-EE
Q 018474 52 NHPEDVSVVVSKGALYTATR-DGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGGVILCD-NEKGLLKVTE-EG-V-EA 126 (355)
Q Consensus 52 ~~p~~i~~d~~~g~l~~~~~-~g~i~~~~~~~g~~~~~~~~~~~p~~gl~~d~~g~L~v~~-~~~gl~~~~~-~g-~-~~ 126 (355)
..|++++++ ++.+|++.. ++.|..+|+++++..........|. +++++++|+|||++ ..+.+.++|. ++ + ..
T Consensus 44 ~~~~~i~~~--~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~~p~-~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~ 120 (328)
T 3dsm_A 44 DVAQSMVIR--DGIGWIVVNNSHVIFAIDINTFKEVGRITGFTSPR-YIHFLSDEKAYVTQIWDYRIFIINPKTYEITGY 120 (328)
T ss_dssp SCEEEEEEE--TTEEEEEEGGGTEEEEEETTTCCEEEEEECCSSEE-EEEEEETTEEEEEEBSCSEEEEEETTTTEEEEE
T ss_pred ccceEEEEE--CCEEEEEEcCCCEEEEEECcccEEEEEcCCCCCCc-EEEEeCCCeEEEEECCCCeEEEEECCCCeEEEE
Confidence 468899987 678998876 6889999999888744334456799 99998889999999 5567889984 66 3 33
Q ss_pred EcCCc-----CCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeeccccccccEEEeCCC
Q 018474 127 IVPDA-----SFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYFANGIALSKNE 201 (355)
Q Consensus 127 ~~~~~-----~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~~~~pngi~~~~dg 201 (355)
+.... ..|.++++ .++++|+++.. ..+.+.++|++++++.........|+++++++||
T Consensus 121 i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~----------------~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG 183 (328)
T 3dsm_A 121 IECPDMDMESGSTEQMVQ-YGKYVYVNCWS----------------YQNRILKIDTETDKVVDELTIGIQPTSLVMDKYN 183 (328)
T ss_dssp EECTTCCTTTCBCCCEEE-ETTEEEEEECT----------------TCCEEEEEETTTTEEEEEEECSSCBCCCEECTTS
T ss_pred EEcCCccccCCCcceEEE-ECCEEEEEcCC----------------CCCEEEEEECCCCeEEEEEEcCCCccceEEcCCC
Confidence 33221 27999999 67899999742 1457999999988876554445679999999999
Q ss_pred CEEEEEeCCC----------CeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCC-EEEEeecCCchhhHhhhcchhH
Q 018474 202 DFVVVCESWK----------FRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGS-FWIGLIKMNQTGVRAIQKCREK 270 (355)
Q Consensus 202 ~~l~v~~~~~----------~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~-lwv~~~~~~~~~~~~~~~~~~~ 270 (355)
+ +|++.... +.|++++.++.+.. +.+.-.....|.+++++++|+ +|++..
T Consensus 184 ~-l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~--~~~~~~~g~~p~~la~~~d~~~lyv~~~---------------- 244 (328)
T 3dsm_A 184 K-MWTITDGGYEGSPYGYEAPSLYRIDAETFTVE--KQFKFKLGDWPSEVQLNGTRDTLYWINN---------------- 244 (328)
T ss_dssp E-EEEEBCCBCTTCSSCBCCCEEEEEETTTTEEE--EEEECCTTCCCEEEEECTTSCEEEEESS----------------
T ss_pred C-EEEEECCCccCCccccCCceEEEEECCCCeEE--EEEecCCCCCceeEEEecCCCEEEEEcc----------------
Confidence 7 88887654 78999997543221 112101122589999998775 777653
Q ss_pred HHHHHhccchhhcccCCCCCCceEEEEEeCCCCeEEE-EEECCCCCcccceeEEEEe--CCEEEEee----cCCCeEEEe
Q 018474 271 WELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIR-DFNDPDATYISFVTSAAEF--DGNLYLAS----LQSNFIGIL 343 (355)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~-~~~~~~g~~~~~~~~~~~~--~g~L~v~~----~~~~~i~~~ 343 (355)
.|+++|.++++... .+ .+.+ ...+.+++.+ +++||+++ ..++.|.++
T Consensus 245 -----------------------~v~~~d~~t~~~~~~~~-~~~~--~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~ 298 (328)
T 3dsm_A 245 -----------------------DIWRMPVEADRVPVRPF-LEFR--DTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRY 298 (328)
T ss_dssp -----------------------SEEEEETTCSSCCSSCS-BCCC--SSCEEEEEECTTTCCEEEEECTTSSSEEEEEEE
T ss_pred -----------------------EEEEEECCCCceeeeee-ecCC--CCceEEEEEcCCCCeEEEEcccccccCCEEEEE
Confidence 28889985565421 11 1111 2356667664 69999999 778999999
Q ss_pred eCCC
Q 018474 344 PLDG 347 (355)
Q Consensus 344 ~~~~ 347 (355)
+...
T Consensus 299 d~~g 302 (328)
T 3dsm_A 299 SPQG 302 (328)
T ss_dssp CTTC
T ss_pred CCCC
Confidence 8764
No 40
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.71 E-value=6.2e-15 Score=138.65 Aligned_cols=223 Identities=13% Similarity=0.129 Sum_probs=163.1
Q ss_pred CCeEEEEecCCEEEEEEcCCCeeEEeeccCCCcccCeEECC-CCCEEEEeCCC-cEEEEcCC-----C-eEEE-cCCcCC
Q 018474 63 KGALYTATRDGWVKYFILHNETLVNWKHIDSQSLLGLTTTK-DGGVILCDNEK-GLLKVTEE-----G-VEAI-VPDASF 133 (355)
Q Consensus 63 ~g~l~~~~~~g~i~~~~~~~g~~~~~~~~~~~p~~gl~~d~-~g~L~v~~~~~-gl~~~~~~-----g-~~~~-~~~~~~ 133 (355)
...|+++. ...|++++........+......|. +|++|. +++||+++... .|++++.+ . .+.+ ......
T Consensus 83 ~~~ll~~~-~~~I~~i~l~~~~~~~~~~~~~~~~-~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~ 160 (400)
T 3p5b_L 83 IAYLFFTN-RHEVRKMTLDRSEYTSLIPNLRNVV-ALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQA 160 (400)
T ss_dssp SCEEEEEE-TTEEEEECTTSCSCEEEECSCSCEE-EEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSC
T ss_pred cceeEEec-cceeEEEccCCcceeEeccccCcce-EEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCC
Confidence 34555554 4679999987666666555566788 999995 67899999764 47777743 2 2333 334478
Q ss_pred cccEEEcc-CCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEee-ccccccccEEEeCCCCEEEEEeCC-
Q 018474 134 TNDVIAAS-DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH-EGFYFANGIALSKNEDFVVVCESW- 210 (355)
Q Consensus 134 ~~~l~~d~-dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~-~~~~~pngi~~~~dg~~l~v~~~~- 210 (355)
|.++++|. .++||++|.. .+.|.+++++++..+.+. ..+..|++|+++|.+..+||++..
T Consensus 161 p~glavD~~~~~lY~~d~~-----------------~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~ 223 (400)
T 3p5b_L 161 PDGLAVDWIHSNIYWTDSV-----------------LGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGT 223 (400)
T ss_dssp EEEEEEETTTTEEEEEETT-----------------TTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSS
T ss_pred cccEEEEecCCceEEEECC-----------------CCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCC
Confidence 99999997 6799999876 468999999877665554 467889999999988889999976
Q ss_pred CCeEEEEEeCCCCCcceeEecccCCCCcCceEECC-CCCEEEEeecCCchhhHhhhcchhHHHHHHhccchhhcccCCCC
Q 018474 211 KFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAP-DGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGS 289 (355)
Q Consensus 211 ~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~-~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (355)
..+|++++++|... +.+....-..|.++++|. .++||+++...
T Consensus 224 ~~~I~~~~~dG~~~---~~~~~~~l~~P~glavd~~~~~lY~aD~~~--------------------------------- 267 (400)
T 3p5b_L 224 PAKIKKGGLNGVDI---YSLVTENIQWPNGITLDLLSGRLYWVDSKL--------------------------------- 267 (400)
T ss_dssp SCCEEEEETTSCSC---EEEECSSCSCEEEEEEETTTTEEEEEETTT---------------------------------
T ss_pred CCEEEEEeCCCCcc---EEEEECCCCceEEEEEEeCCCEEEEEECCC---------------------------------
Confidence 47899999876422 233322224699999994 56899988542
Q ss_pred CCceEEEEEeCCCCeEEEEEECCCCCcccceeEEEEeCCEEEEeecCCCeEEEeeC
Q 018474 290 DAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFDGNLYLASLQSNFIGILPL 345 (355)
Q Consensus 290 ~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~~~i~~~~~ 345 (355)
..|.+++. +|...+.+....+. ...+.++...+++||+++..+++|.+++.
T Consensus 268 ---~~I~~~d~-dG~~~~~~~~~~~~-l~~P~gl~v~~~~lywtd~~~~~V~~~~~ 318 (400)
T 3p5b_L 268 ---HSISSIDV-NGGNRKTILEDEKR-LAHPFSLAVFEDKVFWTDIINEAIFSANR 318 (400)
T ss_dssp ---TEEEEEET-TSCCCEEEEECSST-TSSEEEEEEETTEEEEEESSSCSEEEEES
T ss_pred ---CEEEEEeC-CCCccEEEEeCCCC-CCCCEEEEEeCCEEEEecCCCCeEEEEEc
Confidence 36999999 77655544332222 34566777789999999999999999973
No 41
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.71 E-value=1.3e-15 Score=135.89 Aligned_cols=182 Identities=13% Similarity=0.225 Sum_probs=134.2
Q ss_pred CCCCCceEEEeeCCCeEEEEec--CCEEEEEEcCCCeeE-Eeecc-CCCcccCeEECCCCCEEEEeCC-CcEEEEcCCC-
Q 018474 50 CVNHPEDVSVVVSKGALYTATR--DGWVKYFILHNETLV-NWKHI-DSQSLLGLTTTKDGGVILCDNE-KGLLKVTEEG- 123 (355)
Q Consensus 50 ~~~~p~~i~~d~~~g~l~~~~~--~g~i~~~~~~~g~~~-~~~~~-~~~p~~gl~~d~~g~L~v~~~~-~gl~~~~~~g- 123 (355)
.+..|.+++++..++.+|++.. ++.|.++++ +++.. .+... ...|. ++++|++|++|+++.. +.+++++.+|
T Consensus 75 ~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~-~i~~~~~g~l~v~~~~~~~i~~~~~~g~ 152 (286)
T 1q7f_A 75 QLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQ-YGQFVRKFGATILQHPR-GVTVDNKGRIIVVECKVMRVIIFDQNGN 152 (286)
T ss_dssp CBSSEEEEEEETTTTEEEEEECGGGCEEEEECT-TSCEEEEECTTTCSCEE-EEEECTTSCEEEEETTTTEEEEECTTSC
T ss_pred cccCceEEEEEcCCCeEEEEcCCCCCEEEEECC-CCcEEEEecCccCCCce-EEEEeCCCCEEEEECCCCEEEEEcCCCC
Confidence 3567999999547889999884 789999996 55543 33222 24688 9999999999999865 4588888766
Q ss_pred -eEEEcC--CcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeecc--ccccccEEEe
Q 018474 124 -VEAIVP--DASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEG--FYFANGIALS 198 (355)
Q Consensus 124 -~~~~~~--~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~--~~~pngi~~~ 198 (355)
+..+.. ....|++++++++|++|+++.. .+.|++||+++..+..+... +..|.+++++
T Consensus 153 ~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~-----------------~~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d 215 (286)
T 1q7f_A 153 VLHKFGCSKHLEFPNGVVVNDKQEIFISDNR-----------------AHCVKVFNYEGQYLRQIGGEGITNYPIGVGIN 215 (286)
T ss_dssp EEEEEECTTTCSSEEEEEECSSSEEEEEEGG-----------------GTEEEEEETTCCEEEEESCTTTSCSEEEEEEC
T ss_pred EEEEeCCCCccCCcEEEEECCCCCEEEEECC-----------------CCEEEEEcCCCCEEEEEccCCccCCCcEEEEC
Confidence 444432 2367999999999999999754 45899999876555554322 4679999999
Q ss_pred CCCCEEEEEeCCCC-eEEEEEeCCCCCcceeEecccCC-CCcCceEECCCCCEEEEee
Q 018474 199 KNEDFVVVCESWKF-RCRRYWLKGDRAGILDAFIENLP-GGPDNINLAPDGSFWIGLI 254 (355)
Q Consensus 199 ~dg~~l~v~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~-g~p~~i~~d~~G~lwv~~~ 254 (355)
++|+ +|+++...+ +|.+|+.++... ..+..... ..|.+++++++|++||+..
T Consensus 216 ~~G~-l~v~~~~~~~~i~~~~~~g~~~---~~~~~~~~~~~~~~i~~~~~g~l~vs~~ 269 (286)
T 1q7f_A 216 SNGE-ILIADNHNNFNLTIFTQDGQLI---SALESKVKHAQCFDVALMDDGSVVLASK 269 (286)
T ss_dssp TTCC-EEEEECSSSCEEEEECTTSCEE---EEEEESSCCSCEEEEEEETTTEEEEEET
T ss_pred CCCC-EEEEeCCCCEEEEEECCCCCEE---EEEcccCCCCcceeEEECCCCcEEEECC
Confidence 9997 999998776 999998755322 22221211 2477899999999999963
No 42
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.70 E-value=7.3e-15 Score=133.83 Aligned_cols=220 Identities=13% Similarity=0.057 Sum_probs=158.0
Q ss_pred eEEEEecCCEEEEEEcCCCe--eEEeeccCCCcccCeEECC-CCCEEEEeCCC-cEEEEcCCC--e--EEEcCCcCCccc
Q 018474 65 ALYTATRDGWVKYFILHNET--LVNWKHIDSQSLLGLTTTK-DGGVILCDNEK-GLLKVTEEG--V--EAIVPDASFTND 136 (355)
Q Consensus 65 ~l~~~~~~g~i~~~~~~~g~--~~~~~~~~~~p~~gl~~d~-~g~L~v~~~~~-gl~~~~~~g--~--~~~~~~~~~~~~ 136 (355)
.|+++. ...|.+++..... ..........+. ++.+|. +++||+++... .|++++.+| . ..+......|.+
T Consensus 6 ~ll~~~-~~~I~~i~l~~~~~~~~~~~~~~~~~~-~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~g 83 (318)
T 3sov_A 6 LLLYAN-RRDLRLVDATNGKENATIVVGGLEDAA-AVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDG 83 (318)
T ss_dssp EEEEEC-EEEEEEEETTCTTSCCEEEEEEEEEEE-EEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCE
T ss_pred EEEEEc-cCeEEEEECCCCceEEEEEecCCCccE-EEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccE
Confidence 455554 3569999986542 222222234577 888885 68899999774 477887544 2 233344478999
Q ss_pred EEEcc-CCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEee-ccccccccEEEeCCCCEEEEEeCC-CCe
Q 018474 137 VIAAS-DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH-EGFYFANGIALSKNEDFVVVCESW-KFR 213 (355)
Q Consensus 137 l~~d~-dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~-~~~~~pngi~~~~dg~~l~v~~~~-~~~ 213 (355)
+++|+ +|+||++|.. .+++.++++++...+.+. ..+..|+|++++|++..+||++.. ..+
T Consensus 84 lavd~~~g~ly~~d~~-----------------~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~ 146 (318)
T 3sov_A 84 LACDWLGEKLYWTDSE-----------------TNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPK 146 (318)
T ss_dssp EEEETTTTEEEEEETT-----------------TTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCE
T ss_pred EEEEcCCCeEEEEECC-----------------CCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCE
Confidence 99996 6799999876 468999998766555554 567889999999988889999975 689
Q ss_pred EEEEEeCCCCCcceeEecccCCCCcCceEECC-CCCEEEEeecCCchhhHhhhcchhHHHHHHhccchhhcccCCCCCCc
Q 018474 214 CRRYWLKGDRAGILDAFIENLPGGPDNINLAP-DGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAG 292 (355)
Q Consensus 214 i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~-~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (355)
|++++.+|.. .+.+....-..|+++++|. +|+||+++...
T Consensus 147 I~r~~~dG~~---~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~------------------------------------ 187 (318)
T 3sov_A 147 IERAGMDGSS---RFIIINSEIYWPNGLTLDYEEQKLYWADAKL------------------------------------ 187 (318)
T ss_dssp EEEEETTSCS---CEEEECSSCSCEEEEEEETTTTEEEEEETTT------------------------------------
T ss_pred EEEEEcCCCC---eEEEEECCCCCccEEEEeccCCEEEEEECCC------------------------------------
Confidence 9999987642 2233322224699999996 56899998542
Q ss_pred eEEEEEeCCCCeEEEEEECCCCCcccceeEEEEeCCEEEEeecCCCeEEEeeCC
Q 018474 293 ARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFDGNLYLASLQSNFIGILPLD 346 (355)
Q Consensus 293 ~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~~~i~~~~~~ 346 (355)
..|.+++. +|...+.+.... ...+.+++.+++.||++...+.+|.+++..
T Consensus 188 ~~I~~~d~-dG~~~~~~~~~~---~~~P~glav~~~~lywtd~~~~~V~~~~~~ 237 (318)
T 3sov_A 188 NFIHKSNL-DGTNRQAVVKGS---LPHPFALTLFEDILYWTDWSTHSILACNKY 237 (318)
T ss_dssp TEEEEEET-TSCSCEEEECSC---CSCEEEEEEETTEEEEEETTTTEEEEEETT
T ss_pred CEEEEEcC-CCCceEEEecCC---CCCceEEEEeCCEEEEEecCCCeEEEEECC
Confidence 46999999 776555554312 345667777899999999999999999874
No 43
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.69 E-value=3.2e-15 Score=140.61 Aligned_cols=184 Identities=13% Similarity=0.111 Sum_probs=134.6
Q ss_pred CCCCceEEEeeCCCeEEEEec-CCEEEEEEcCCC----eeEEeec-cCCCcccCeEECC-CCCEEEEeCCC-cEEEEcCC
Q 018474 51 VNHPEDVSVVVSKGALYTATR-DGWVKYFILHNE----TLVNWKH-IDSQSLLGLTTTK-DGGVILCDNEK-GLLKVTEE 122 (355)
Q Consensus 51 ~~~p~~i~~d~~~g~l~~~~~-~g~i~~~~~~~g----~~~~~~~-~~~~p~~gl~~d~-~g~L~v~~~~~-gl~~~~~~ 122 (355)
+..|.+|++|+.++.||++.. +++|+++++... ....+.. ....|. ||++|. .++||+++... .|.+++.+
T Consensus 111 ~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~-glavD~~~~~lY~~d~~~~~I~~~~~~ 189 (400)
T 3p5b_L 111 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD-GLAVDWIHSNIYWTDSVLGTVSVADTK 189 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEE-EEEEETTTTEEEEEETTTTEEEEECTT
T ss_pred cCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcc-cEEEEecCCceEEEECCCCeEEEEeCC
Confidence 688999999977888887654 789999998541 2233332 345789 999996 78899999874 46677766
Q ss_pred C--eEEEc-CCcCCcccEEEcc-CCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEe-eccccccccEEE
Q 018474 123 G--VEAIV-PDASFTNDVIAAS-DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVL-HEGFYFANGIAL 197 (355)
Q Consensus 123 g--~~~~~-~~~~~~~~l~~d~-dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~-~~~~~~pngi~~ 197 (355)
| .+.+. .....|++|++|+ +|.||++|... .+.|+++++++...+.+ ..++..|+||++
T Consensus 190 g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~----------------~~~I~~~~~dG~~~~~~~~~~l~~P~glav 253 (400)
T 3p5b_L 190 GVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGT----------------PAKIKKGGLNGVDIYSLVTENIQWPNGITL 253 (400)
T ss_dssp TCSEEEEEECSSCCEEEEEEETTTTEEEEEECSS----------------SCCEEEEETTSCSCEEEECSSCSCEEEEEE
T ss_pred CCceEEEEeCCCCCcceEEEecccCeEEEEeCCC----------------CCEEEEEeCCCCccEEEEECCCCceEEEEE
Confidence 6 44443 3447899999998 57999998641 24799999876655544 356789999999
Q ss_pred eCCCCEEEEEeCCCCeEEEEEeCCCCCcceeEeccc--CCCCcCceEECCCCCEEEEeec
Q 018474 198 SKNEDFVVVCESWKFRCRRYWLKGDRAGILDAFIEN--LPGGPDNINLAPDGSFWIGLIK 255 (355)
Q Consensus 198 ~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~g~p~~i~~d~~G~lwv~~~~ 255 (355)
+++++.|||+++..++|++++++|.. .+.+... .-..|.+++++. +++|++...
T Consensus 254 d~~~~~lY~aD~~~~~I~~~d~dG~~---~~~~~~~~~~l~~P~gl~v~~-~~lywtd~~ 309 (400)
T 3p5b_L 254 DLLSGRLYWVDSKLHSISSIDVNGGN---RKTILEDEKRLAHPFSLAVFE-DKVFWTDII 309 (400)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSCC---CEEEEECSSTTSSEEEEEEET-TEEEEEESS
T ss_pred EeCCCEEEEEECCCCEEEEEeCCCCc---cEEEEeCCCCCCCCEEEEEeC-CEEEEecCC
Confidence 99999999999999999999997742 2333322 224689999965 567777754
No 44
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.69 E-value=1.2e-14 Score=131.94 Aligned_cols=218 Identities=15% Similarity=0.176 Sum_probs=146.4
Q ss_pred CCeEEEEecCCEEEEEEcCCCeeEE-eeccCCCcccCeEECCCCCEEEEeCCCcEEEEcCCC--eEEEcCCcCCcccEEE
Q 018474 63 KGALYTATRDGWVKYFILHNETLVN-WKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVTEEG--VEAIVPDASFTNDVIA 139 (355)
Q Consensus 63 ~g~l~~~~~~g~i~~~~~~~g~~~~-~~~~~~~p~~gl~~d~~g~L~v~~~~~gl~~~~~~g--~~~~~~~~~~~~~l~~ 139 (355)
++.+|+++.++.|+++++. |+... +........ .++.|++|+||+++..+++++++..| ..........+.++++
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~-~~~~~~~g~l~vgt~~~~l~~~d~~g~~~~~~~~~~~~~~~~~~ 184 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYA-TPIVSEDGTIYVGSNDNYLYAINPDGTEKWRFKTNDAITSAASI 184 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCS-CCEECTTSCEEEECTTSEEEEECTTSCEEEEEECSSCCCSCCEE
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceee-eeEEcCCCEEEEEcCCCEEEEECCCCCEeEEEecCCCceeeeEE
Confidence 7889999989999999986 65432 222223345 78889899999999778999999557 3333333356778899
Q ss_pred ccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeeccccccccEEEeCCCCEEEEEeCCCCeEEEEEe
Q 018474 140 ASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYFANGIALSKNEDFVVVCESWKFRCRRYWL 219 (355)
Q Consensus 140 d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~~~~pngi~~~~dg~~l~v~~~~~~~i~~~~~ 219 (355)
|++|+||++. ++++++|+++...............++.+++|. +|++.. .++|.+++.
T Consensus 185 d~~g~l~v~t--------------------~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~-~~gl~~~~~ 242 (330)
T 3hxj_A 185 GKDGTIYFGS--------------------DKVYAINPDGTEKWNFYAGYWTVTRPAISEDGT-IYVTSL-DGHLYAINP 242 (330)
T ss_dssp CTTCCEEEES--------------------SSEEEECTTSCEEEEECCSSCCCSCCEECTTSC-EEEEET-TTEEEEECT
T ss_pred cCCCEEEEEe--------------------CEEEEECCCCcEEEEEccCCcceeceEECCCCe-EEEEcC-CCeEEEECC
Confidence 9999999974 368999953333322222234466788888886 888753 579999975
Q ss_pred CCCCCcceeEecccCCCCcCceEECCCCCEEEEeecCCchhhHhhhcchhHHHHHHhccchhhcccCCCCCCceEEEEEe
Q 018474 220 KGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVD 299 (355)
Q Consensus 220 ~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 299 (355)
++... ..+. .....+..+.+|++|++|+++.. ++++++|
T Consensus 243 ~g~~~---~~~~-~~~~~~~~~~~~~~g~l~v~t~~-------------------------------------ggl~~~d 281 (330)
T 3hxj_A 243 DGTEK---WRFK-TGKRIESSPVIGNTDTIYFGSYD-------------------------------------GHLYAIN 281 (330)
T ss_dssp TSCEE---EEEE-CSSCCCSCCEECTTSCEEEECTT-------------------------------------CEEEEEC
T ss_pred CCCEe---EEee-CCCCccccceEcCCCeEEEecCC-------------------------------------CCEEEEC
Confidence 44322 1121 12234556788889999999865 5799999
Q ss_pred CCCCeEEEEEECCCCCcccceeEEEE-eCCEEEEeecCCCeEEEeeCCCCCCC
Q 018474 300 GNDGKIIRDFNDPDATYISFVTSAAE-FDGNLYLASLQSNFIGILPLDGPEPQ 351 (355)
Q Consensus 300 ~~~g~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~~~~~ 351 (355)
+ +|+....+..+.. .+.+++. .+|+||+++. +..+...+.+...++
T Consensus 282 ~-~g~~~~~~~~~~~----~~~~~~~d~~g~l~~gt~-~G~~~~~~~~~~~~~ 328 (330)
T 3hxj_A 282 P-DGTEKWNFETGSW----IIATPVIDENGTIYFGTR-NGKFYALFNLEHHHH 328 (330)
T ss_dssp T-TSCEEEEEECSSC----CCSCCEECTTCCEEEECT-TSCEEEEEC------
T ss_pred C-CCcEEEEEEcCCc----cccceEEcCCCEEEEEcC-CCeEEEEeccccccc
Confidence 9 9998877765432 3334555 6799999997 566766666655543
No 45
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.69 E-value=1.1e-15 Score=139.26 Aligned_cols=180 Identities=14% Similarity=0.069 Sum_probs=129.8
Q ss_pred CCCceEEEeeCCCeEEEEecCCEEEEEEcCCCeeEEeecc-----CCCcccCeEECC-CCCEEEEeCC------------
Q 018474 52 NHPEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHI-----DSQSLLGLTTTK-DGGVILCDNE------------ 113 (355)
Q Consensus 52 ~~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~~~~-----~~~p~~gl~~d~-~g~L~v~~~~------------ 113 (355)
..|.+|+++++++.||+++..++|+++++.+++.+.+... ...|+ ++++|+ +|+|||++..
T Consensus 80 ~~p~gi~~~~~~g~l~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~-~i~~d~~~G~l~v~d~~~~~~~~~~~~~~ 158 (322)
T 2fp8_A 80 GRTYDISYNLQNNQLYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLY-AVTVDQRTGIVYFTDVSTLYDDRGVQQIM 158 (322)
T ss_dssp CCEEEEEEETTTTEEEEEETTTEEEEECTTCEECEEEESEETTEECSCEE-EEEECTTTCCEEEEESCSSCCTTCHHHHH
T ss_pred CCCceEEEcCCCCcEEEEECCCCEEEEeCCCCEEEEecccCCCCcccccc-eEEEecCCCEEEEECCcccccccccceeh
Confidence 4689999994378999998878899999877766555321 13588 999999 9999999864
Q ss_pred ------CcEEEEcC-CC-eEEEcCCcCCcccEEEccCCc-EEEEeCCCCCCCccccccccccCCCCeEEEEeCCC---Ce
Q 018474 114 ------KGLLKVTE-EG-VEAIVPDASFTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKL---KE 181 (355)
Q Consensus 114 ------~gl~~~~~-~g-~~~~~~~~~~~~~l~~d~dG~-ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~---~~ 181 (355)
++++++++ ++ ++.+......|++++++++|+ ||+++.. .++|++|+.++ ++
T Consensus 159 ~~~~~~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~-----------------~~~I~~~~~~~~~~~~ 221 (322)
T 2fp8_A 159 DTSDKTGRLIKYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFL-----------------SHQIVKYWLEGPKKGT 221 (322)
T ss_dssp HHTCCCEEEEEEETTTTEEEEEEEEESCCCEEEECTTSSEEEEEEGG-----------------GTEEEEEESSSTTTTC
T ss_pred cccCCCceEEEEeCCCCEEEEeccCCccCcceEECCCCCEEEEEeCC-----------------CCeEEEEECCCCcCCc
Confidence 35899986 56 665544457899999999985 9999865 45799998764 34
Q ss_pred EEEeeccccccccEEEeCCCCEEEEEeCC----------CCeEEEEEeCCCCCcceeEecc--cC-CCCcCceEECCCCC
Q 018474 182 TTVLHEGFYFANGIALSKNEDFVVVCESW----------KFRCRRYWLKGDRAGILDAFIE--NL-PGGPDNINLAPDGS 248 (355)
Q Consensus 182 ~~~~~~~~~~pngi~~~~dg~~l~v~~~~----------~~~i~~~~~~~~~~~~~~~~~~--~~-~g~p~~i~~d~~G~ 248 (355)
.+.+..... |+|++++++|+ +|+++.. .++|.+|+.++... +.+.. .. ...+.++.. .+|+
T Consensus 222 ~~~~~~~~g-P~gi~~d~~G~-l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~---~~~~~~~g~~~~~~~~~~~-~~g~ 295 (322)
T 2fp8_A 222 AEVLVKIPN-PGNIKRNADGH-FWVSSSEELDGNMHGRVDPKGIKFDEFGNIL---EVIPLPPPFAGEHFEQIQE-HDGL 295 (322)
T ss_dssp EEEEEECSS-EEEEEECTTSC-EEEEEEEETTSSTTSCEEEEEEEECTTSCEE---EEEECCTTTTTSCCCEEEE-ETTE
T ss_pred cceEEeCCC-CCCeEECCCCC-EEEEecCcccccccCCCccEEEEECCCCCEE---EEEECCCCCccccceEEEE-eCCE
Confidence 444443223 99999999998 9999865 46799998765322 22211 11 123566666 4689
Q ss_pred EEEEeec
Q 018474 249 FWIGLIK 255 (355)
Q Consensus 249 lwv~~~~ 255 (355)
|||++..
T Consensus 296 L~v~~~~ 302 (322)
T 2fp8_A 296 LYIGTLF 302 (322)
T ss_dssp EEEECSS
T ss_pred EEEeecC
Confidence 9999754
No 46
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.69 E-value=1.4e-14 Score=134.04 Aligned_cols=256 Identities=14% Similarity=0.192 Sum_probs=163.4
Q ss_pred ceEecCCCCCCCceEEEeeCCCeEEEEecCCEEEEEEcCCCeeEEeec------cCCCcccCeEECCC----CCEEEEeC
Q 018474 43 LTKLGEGCVNHPEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKH------IDSQSLLGLTTTKD----GGVILCDN 112 (355)
Q Consensus 43 ~~~~~~~~~~~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~~~------~~~~p~~gl~~d~~----g~L~v~~~ 112 (355)
.+.+..+ +..|++|+++ .+|.||++...|+|++++. +|+ +.+.. ....|. ||+++++ |.|||+..
T Consensus 21 ~~~va~~-l~~P~~ia~~-pdG~l~V~e~~g~I~~~d~-~G~-~~~~~~~v~~~g~~g~~-gia~~pdf~~~g~lyv~~~ 95 (354)
T 3a9g_A 21 ISEVASD-LEVPWSIAPL-GGGRYLVTERPGRLVLISP-SGK-KLVASFDVANVGEAGLL-GLALHPEFPKKSWVYLYAS 95 (354)
T ss_dssp EEEEECS-CSCEEEEEEE-ETTEEEEEETTTEEEEECS-SCE-EEEEECCCCCSTTCSEE-EEEECTTTTTSCEEEEEEE
T ss_pred EEEEeCC-CCCCeEEEEc-CCCeEEEEeCCCEEEEEeC-CCc-eEeeccceeecCCCcee-eEEeCCCCCcCCEEEEEEe
Confidence 3556655 7899999999 5778999998999999975 666 44431 234688 9999986 89999875
Q ss_pred C--------CcEEEEc-C-C-C-e---EEEcC----C-cCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeE
Q 018474 113 E--------KGLLKVT-E-E-G-V---EAIVP----D-ASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQL 172 (355)
Q Consensus 113 ~--------~gl~~~~-~-~-g-~---~~~~~----~-~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l 172 (355)
. ..|++++ . . + + +.+.. . ...+++|++++||.||+++.... . ...... .....|.|
T Consensus 96 ~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~-~-~~~~~d--~~~~~G~I 171 (354)
T 3a9g_A 96 YFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAA-D-PRLAQD--LSSLAGKI 171 (354)
T ss_dssp EECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTT-C-GGGGTC--TTCCSSEE
T ss_pred ccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCC-C-CccccC--CCCCCeEE
Confidence 3 4688887 2 2 1 1 22211 1 15689999999999999975411 0 000001 12335789
Q ss_pred EEEeCCCC--------eEEEeeccccccccEEEeCCCCEEEEEeCCCCe---EEEEEeCCCCCcc------------eeE
Q 018474 173 RKYDPKLK--------ETTVLHEGFYFANGIALSKNEDFVVVCESWKFR---CRRYWLKGDRAGI------------LDA 229 (355)
Q Consensus 173 ~~~dp~~~--------~~~~~~~~~~~pngi~~~~dg~~l~v~~~~~~~---i~~~~~~~~~~~~------------~~~ 229 (355)
+|+++++. ..+.+..++.+|+|++++++...||+++...++ |.++. .+...+. ...
T Consensus 172 ~ri~~dG~~p~~npf~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~-~G~nyGwp~~~g~~~~~~~~~p 250 (354)
T 3a9g_A 172 LRVDEEGRPPADNPFPNSPIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIIL-KGGNYGWPLATGKAGRGEFVDP 250 (354)
T ss_dssp EEECTTSCCCTTSSSTTCCEEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEEC-TTCBCCTTTCCSCCCCTTSCCC
T ss_pred EEEcCCCCCCCCCCCCCCcEEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEec-CCCcCCCCcccCCCCCCCCcCC
Confidence 99999754 345667788999999999943349999987655 44443 2221110 001
Q ss_pred ecc--cCCCCcCceEE-------CCCCCEEEEeecCCchhhHhhhcchhHHHHHHhccchhhcccCCCCCCceEEEEEeC
Q 018474 230 FIE--NLPGGPDNINL-------APDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDG 300 (355)
Q Consensus 230 ~~~--~~~g~p~~i~~-------d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 300 (355)
... .....|.++++ +.+|++|++.... +.|.+++.
T Consensus 251 ~~~~~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~------------------------------------~~v~~~~~ 294 (354)
T 3a9g_A 251 VIDTGSETWAPSGASFVHGDMFPGLRGWLLIACLRG------------------------------------SMLAAVNF 294 (354)
T ss_dssp SEECTTCCCCEEEEEECCSSSCGGGTTEEEEEETTT------------------------------------TEEEEEEE
T ss_pred EeecCCCCcCCcceEEECCCCCcccCCcEEEEEcCC------------------------------------CEEEEEEE
Confidence 110 11234788887 4678999998652 35777776
Q ss_pred C-CCeEE--EEEECCCCCcccceeEEEEe-CCEEEEeecC-CC---------eEEEeeCCC
Q 018474 301 N-DGKII--RDFNDPDATYISFVTSAAEF-DGNLYLASLQ-SN---------FIGILPLDG 347 (355)
Q Consensus 301 ~-~g~~~--~~~~~~~g~~~~~~~~~~~~-~g~L~v~~~~-~~---------~i~~~~~~~ 347 (355)
+ +|+.. +.+-. +. ...+..++.+ +|.||+++.. .. +|.|+...+
T Consensus 295 ~~~g~~~~~~~~~~--~~-~~rp~~v~~~pDG~lyv~~~~~~G~g~~~~~~g~i~ri~~~g 352 (354)
T 3a9g_A 295 GDNMEVRKISTFFK--NV-FGRLRDVVIDDDGGILISTSNRDGRGSLRAGDDKILKIVSEQ 352 (354)
T ss_dssp CGGGCEEEEEEECT--TT-SCCEEEEEECTTSCEEEEECTTSSSSCCCTTCSCEEEEEETT
T ss_pred CCCCcccceeeecc--CC-CCCeeEEEECCCCcEEEEEeCCCCCcCCCCCCCEEEEEecCC
Confidence 2 24432 23322 11 2346667765 5899999863 33 899987654
No 47
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.68 E-value=8.6e-15 Score=131.41 Aligned_cols=178 Identities=12% Similarity=0.142 Sum_probs=129.8
Q ss_pred CCCCceEEEeeCCCeEEEEec-CCEEEEEEcCCCeeEEeecc-----CCCcccCeEECCCCCEEEEeC------------
Q 018474 51 VNHPEDVSVVVSKGALYTATR-DGWVKYFILHNETLVNWKHI-----DSQSLLGLTTTKDGGVILCDN------------ 112 (355)
Q Consensus 51 ~~~p~~i~~d~~~g~l~~~~~-~g~i~~~~~~~g~~~~~~~~-----~~~p~~gl~~d~~g~L~v~~~------------ 112 (355)
...|.+++++ .+|.+|++.. +++|.++++++|+.+.+... ...|. ++++|++|++|+++.
T Consensus 68 ~~~~~~l~~~-~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~-~i~~d~~G~l~vtd~~~g~~~~~~~~~ 145 (296)
T 3e5z_A 68 SHHQNGHCLN-KQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPN-DVCLAPDGSLWFSDPTYGIDKPEEGYG 145 (296)
T ss_dssp CSSEEEEEEC-TTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCC-CEEECTTSCEEEEECSHHHHCGGGSSC
T ss_pred CCCcceeeEC-CCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCC-CEEECCCCCEEEECCcccccccccccc
Confidence 3568999999 5777898876 48899999988887665321 24578 899999999999753
Q ss_pred ------CCcEEEEcCCC-eEEEcCCcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCC-CCeE--
Q 018474 113 ------EKGLLKVTEEG-VEAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPK-LKET-- 182 (355)
Q Consensus 113 ------~~gl~~~~~~g-~~~~~~~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~-~~~~-- 182 (355)
..+|++++++| ++.+......|++++++++|++++++.. .+.+++|+.+ ++++
T Consensus 146 ~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~gi~~s~dg~~lv~~~~-----------------~~~i~~~~~~~~g~~~~ 208 (296)
T 3e5z_A 146 GEMELPGRWVFRLAPDGTLSAPIRDRVKPNGLAFLPSGNLLVSDTG-----------------DNATHRYCLNARGETEY 208 (296)
T ss_dssp CCCCSSSCEEEEECTTSCEEEEECCCSSEEEEEECTTSCEEEEETT-----------------TTEEEEEEECSSSCEEE
T ss_pred ccccCCCcEEEEECCCCCEEEeecCCCCCccEEECCCCCEEEEeCC-----------------CCeEEEEEECCCCcCcC
Confidence 24799998667 6666555578999999999987687754 4578888865 4554
Q ss_pred --EEeeccccccccEEEeCCCCEEEEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEE-CCCC-CEEEEeec
Q 018474 183 --TVLHEGFYFANGIALSKNEDFVVVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINL-APDG-SFWIGLIK 255 (355)
Q Consensus 183 --~~~~~~~~~pngi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~-d~~G-~lwv~~~~ 255 (355)
+.+......|.+++++++|+ +|++. .++|.+|+.++... ..+. ...+ |.++++ .++| .||+++..
T Consensus 209 ~~~~~~~~~~~p~~i~~d~~G~-l~v~~--~~~v~~~~~~g~~~---~~~~-~~~~-~~~~~f~~~d~~~L~v~t~~ 277 (296)
T 3e5z_A 209 QGVHFTVEPGKTDGLRVDAGGL-IWASA--GDGVHVLTPDGDEL---GRVL-TPQT-TSNLCFGGPEGRTLYMTVST 277 (296)
T ss_dssp EEEEECCSSSCCCSEEEBTTSC-EEEEE--TTEEEEECTTSCEE---EEEE-CSSC-CCEEEEESTTSCEEEEEETT
T ss_pred CCeEeeCCCCCCCeEEECCCCC-EEEEc--CCeEEEECCCCCEE---EEEE-CCCC-ceeEEEECCCCCEEEEEcCC
Confidence 22222345689999999998 88887 68999999864322 2222 2223 888888 4666 49998853
No 48
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.68 E-value=2.2e-14 Score=145.18 Aligned_cols=229 Identities=14% Similarity=0.137 Sum_probs=165.3
Q ss_pred eEEEeeCCCeEEEEecCCEEEEEEcCCCeeEEeeccCCCcccCeEECC-CCCEEEEeCCCc-EEEEcCCC------eEEE
Q 018474 56 DVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHIDSQSLLGLTTTK-DGGVILCDNEKG-LLKVTEEG------VEAI 127 (355)
Q Consensus 56 ~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~~~~~~~p~~gl~~d~-~g~L~v~~~~~g-l~~~~~~g------~~~~ 127 (355)
+.+++ ....|+++.. ..|++++...+....+......|. +|++|. +++||+++...+ |++++.+| .+.+
T Consensus 389 C~~~~-~~p~Ll~an~-~~Ir~i~l~~~~~~~l~~~~~~~~-gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~v 465 (791)
T 3m0c_C 389 CKAVG-SIAYLFFTNR-HEVRKMTLDRSEYTSLIPNLRNVV-ALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTV 465 (791)
T ss_dssp CEETT-SCCEEEEECB-SSEEEECTTSCCCEEEECSCSSEE-EEEEETTTTEEEEEETTTTEEEEEEC--------CEEE
T ss_pred eeecc-cccccccccc-cceeEeeccCCcceeeecCCCceE-EEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEE
Confidence 33344 3445666554 458888886666666655556788 999996 678999998754 77777432 2333
Q ss_pred cC-CcCCcccEEEccCC-cEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEee-ccccccccEEEeCCCCEE
Q 018474 128 VP-DASFTNDVIAASDG-TLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH-EGFYFANGIALSKNEDFV 204 (355)
Q Consensus 128 ~~-~~~~~~~l~~d~dG-~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~-~~~~~pngi~~~~dg~~l 204 (355)
.. ....|.+|++|..+ +||++|.. .++|.++++++...+++. ..+..|+||++++.+..|
T Consensus 466 i~~~l~~P~GLAvD~~~~~LY~tD~~-----------------~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~L 528 (791)
T 3m0c_C 466 ISRDIQAPDGLAVDWIHSNIYWTDSV-----------------LGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFM 528 (791)
T ss_dssp ECSSCSCCCEEEEETTTTEEEEEETT-----------------TTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEE
T ss_pred EecCCCCcceeeeeecCCcEEEEecC-----------------CCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCE
Confidence 33 45789999999765 99999976 568999999877666554 467789999999998889
Q ss_pred EEEeCCC-CeEEEEEeCCCCCcceeEecccCCCCcCceEEC-CCCCEEEEeecCCchhhHhhhcchhHHHHHHhccchhh
Q 018474 205 VVCESWK-FRCRRYWLKGDRAGILDAFIENLPGGPDNINLA-PDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLIS 282 (355)
Q Consensus 205 ~v~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d-~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (355)
||++.+. .+|.+++++|.. .+.++...-..|.+|++| ..|+||++....
T Consensus 529 YwtD~g~~~~I~~~~~dG~~---~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~-------------------------- 579 (791)
T 3m0c_C 529 YWTDWGTPAKIKKGGLNGVD---IYSLVTENIQWPNGITLDLLSGRLYWVDSKL-------------------------- 579 (791)
T ss_dssp EEEECSSSCEEEEEETTSCC---EEEEECSSCSCEEEEEEETTTTEEEEEETTT--------------------------
T ss_pred EEecCCCCCeEEEEecCCCc---eEEEEeCCCCCceEEEEecCCCeEEEEeCCC--------------------------
Confidence 9999876 899999987642 233333222469999999 567899998541
Q ss_pred cccCCCCCCceEEEEEeCCCCeEEEEEECCCCCcccceeEEEEeCCEEEEeecCCCeEEEeeC
Q 018474 283 LLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFDGNLYLASLQSNFIGILPL 345 (355)
Q Consensus 283 ~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~~~i~~~~~ 345 (355)
..|.+++. +|.....+....+. .....++...+++||+++..+++|.+++.
T Consensus 580 ----------~~I~~~d~-dG~~~~~v~~~~~~-l~~P~glav~~~~lYwtD~~~~~I~~~dk 630 (791)
T 3m0c_C 580 ----------HSISSIDV-NGGNRKTILEDEKR-LAHPFSLAVFEDKVFWTDIINEAIFSANR 630 (791)
T ss_dssp ----------TEEEEEET-TSCSCEEEEECTTT-TSSEEEEEEETTEEEEEETTTTEEEEEET
T ss_pred ----------CcEEEEec-CCCceEEEecCCCc-cCCCCEEEEeCCEEEEEECCCCEEEEEeC
Confidence 36999999 87655544332222 44566777788999999999999999974
No 49
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=99.67 E-value=1.9e-14 Score=129.43 Aligned_cols=186 Identities=12% Similarity=0.067 Sum_probs=128.2
Q ss_pred CCCCceEEEeeCCCeEEEEe-cCCEEEEEEcCCCeeEEeeccC----C----CcccCeEE---CCCCCEEEEeC------
Q 018474 51 VNHPEDVSVVVSKGALYTAT-RDGWVKYFILHNETLVNWKHID----S----QSLLGLTT---TKDGGVILCDN------ 112 (355)
Q Consensus 51 ~~~p~~i~~d~~~g~l~~~~-~~g~i~~~~~~~g~~~~~~~~~----~----~p~~gl~~---d~~g~L~v~~~------ 112 (355)
-..||++.+|+.++.+|+++ .++.|.++++.++....+.... + .+. ||.+ |++|+||++..
T Consensus 12 ~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~s-Gl~~~~~D~~grL~vv~~~~~af~ 90 (334)
T 2p9w_A 12 NLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMS-GLSLLTHDNSKRLFAVMKNAKSFN 90 (334)
T ss_dssp TCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEE-EEEESSSSSCCEEEEEEEETTTTC
T ss_pred ccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceee-EEEEeccCCCCcEEEEEccccccc
Confidence 46899999997789999988 5899999999766554442111 1 467 9999 78999999532
Q ss_pred --------CCcEEEEc-C---CC--eEEEcC-------------CcCCcccEEEccCCcEEEEeCCCCCCCccccccccc
Q 018474 113 --------EKGLLKVT-E---EG--VEAIVP-------------DASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAE 165 (355)
Q Consensus 113 --------~~gl~~~~-~---~g--~~~~~~-------------~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~ 165 (355)
...+++++ + ++ +....- ....+|++++|++|++|++++.
T Consensus 91 ~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~-------------- 156 (334)
T 2p9w_A 91 FADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFAL-------------- 156 (334)
T ss_dssp TTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEE--------------
T ss_pred ccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCC--------------
Confidence 24588999 4 46 222211 1135999999999999999764
Q ss_pred cCCC-CeEEEEeCCCCeEEEeec------cccccccEEEeCCCCEEEEEeCCCCeEEEEEeCCCCCcceeEec-cc--CC
Q 018474 166 GKPY-GQLRKYDPKLKETTVLHE------GFYFANGIALSKNEDFVVVCESWKFRCRRYWLKGDRAGILDAFI-EN--LP 235 (355)
Q Consensus 166 ~~~~-g~l~~~dp~~~~~~~~~~------~~~~pngi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~-~~--~~ 235 (355)
. +.|++++|++.....+.. ....+|||+++|||+.|++.++ .++|++++++.........-. .. ..
T Consensus 157 ---~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~~~pv~~~v~~~~~G~~~~~ 232 (334)
T 2p9w_A 157 ---GMPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-PRALTAFDVSKPYAWPEPVKINGDFGTL 232 (334)
T ss_dssp ---SSCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-SSSEEEEECSSSSCCCEECEESSCCCCC
T ss_pred ---CCCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-CCeEEEEcCCCCcceeecccccCCcccc
Confidence 3 679999998765554321 1235789999999999999998 899999998632110111100 10 11
Q ss_pred CCcCce-EECCCCCE-EEEeec
Q 018474 236 GGPDNI-NLAPDGSF-WIGLIK 255 (355)
Q Consensus 236 g~p~~i-~~d~~G~l-wv~~~~ 255 (355)
..|+++ ....+|++ +|+...
T Consensus 233 ~~~dgilp~~~~G~vllV~~~~ 254 (334)
T 2p9w_A 233 SGTEKIVTVPVGNESVLVGARA 254 (334)
T ss_dssp TTEEEEEEEEETTEEEEEEEET
T ss_pred cCcccccccccCCEEEEEEcCC
Confidence 247885 55668887 666643
No 50
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.66 E-value=3.2e-14 Score=140.87 Aligned_cols=186 Identities=11% Similarity=0.079 Sum_probs=139.3
Q ss_pred CCCCCCceEEEeeCCCeEEEEec-CCEEEEEEcCCCeeEEeecc-CCCcccCeEECC-CCCEEEEeCCCc-EEEEcCCC-
Q 018474 49 GCVNHPEDVSVVVSKGALYTATR-DGWVKYFILHNETLVNWKHI-DSQSLLGLTTTK-DGGVILCDNEKG-LLKVTEEG- 123 (355)
Q Consensus 49 ~~~~~p~~i~~d~~~g~l~~~~~-~g~i~~~~~~~g~~~~~~~~-~~~p~~gl~~d~-~g~L~v~~~~~g-l~~~~~~g- 123 (355)
..+..|.+|++|+.++.+|++.. .++|+++++.....+.+... ...|. ||++|. .++||+++...+ |.+.+.+|
T Consensus 346 ~~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~-GlAvD~~~~~lY~tD~~~~~I~v~~~~G~ 424 (619)
T 3s94_A 346 EDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPD-GIAVDWVARNLYWTDTGTDRIEVTRLNGT 424 (619)
T ss_dssp SCCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCC-EEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred cccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcC-ceEEecccCcEEEEeCCCCcEEEEeCCCC
Confidence 34678999999977888888764 78999999955444444433 36799 999995 678999998755 55555566
Q ss_pred -eEEEcC-CcCCcccEEEccC-CcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEee-ccccccccEEEeC
Q 018474 124 -VEAIVP-DASFTNDVIAASD-GTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH-EGFYFANGIALSK 199 (355)
Q Consensus 124 -~~~~~~-~~~~~~~l~~d~d-G~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~-~~~~~pngi~~~~ 199 (355)
.+.+.. ....|++|++||. |.||++|... ...|++.+.++...+.+. ..+..|+||++++
T Consensus 425 ~~~~l~~~~l~~P~~iavdp~~G~ly~tD~g~----------------~~~I~r~~~dG~~~~~l~~~~l~~P~GlalD~ 488 (619)
T 3s94_A 425 MRKILISEDLEEPRAIVLDPMVGYMYWTDWGE----------------IPKIERAALDGSDRVVLVNTSLGWPNGLALDY 488 (619)
T ss_dssp SCEEEECTTCCSEEEEEEETTTTEEEEEECSS----------------SCEEEEEETTSCSCEEEECSSCSCEEEEEEET
T ss_pred eEEEEEECCCCCeeeEEEEcCCCcEEEecCCC----------------CCEEEEEccCCCccEEEEeCCCCCCeeeEEcc
Confidence 555543 4588999999985 8999999751 357888888665444444 4588999999999
Q ss_pred CCCEEEEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCCEEEEeec
Q 018474 200 NEDFVVVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIK 255 (355)
Q Consensus 200 dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~ 255 (355)
+++.|||+++..++|.+++++|... +.+.......|.+++++. +++|+++..
T Consensus 489 ~~~~LY~aD~~~~~I~~~~~dG~~~---~~~~~~~l~~P~glav~~-~~ly~tD~~ 540 (619)
T 3s94_A 489 DEGKIYWGDAKTDKIEVMNTDGTGR---RVLVEDKIPHIFGFTLLG-DYVYWTDWQ 540 (619)
T ss_dssp TTTEEEEEETTTTEEEEEESSSCCC---EEEEECCCCSSCCEEEET-TEEEEECTT
T ss_pred cCCEEEEEECCCCEEEEEecCCCce---EEEeccCCCCcEEEEEEC-CEEEEeecC
Confidence 8889999999999999999987432 233322234699999976 489999866
No 51
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.66 E-value=1.8e-14 Score=135.86 Aligned_cols=181 Identities=13% Similarity=0.191 Sum_probs=130.8
Q ss_pred CCCCceEEEeeCCCeEEEEecCC--EEEEEEcCCCee-EEe---ec-cCCCcccCeEECC-CCCEEEEeCCCcEEEEcC-
Q 018474 51 VNHPEDVSVVVSKGALYTATRDG--WVKYFILHNETL-VNW---KH-IDSQSLLGLTTTK-DGGVILCDNEKGLLKVTE- 121 (355)
Q Consensus 51 ~~~p~~i~~d~~~g~l~~~~~~g--~i~~~~~~~g~~-~~~---~~-~~~~p~~gl~~d~-~g~L~v~~~~~gl~~~~~- 121 (355)
...|. ++++++++.||++..++ .|+++++.++.. ..+ .. ....|. ++++|+ +|+||+++..+.+++++.
T Consensus 171 ~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~-~iav~p~~g~lyv~d~~~~I~~~d~~ 248 (409)
T 3hrp_A 171 FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIG-AVALDETEEWLYFVDSNKNFGRFNVK 248 (409)
T ss_dssp CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCC-BCEECTTSSEEEEECTTCEEEEEETT
T ss_pred CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcE-EEEEeCCCCeEEEEECCCcEEEEECC
Confidence 45677 99997778899887754 899999865543 222 12 346789 999998 789999886556999985
Q ss_pred CC-eEEE----cCCc--CCcc-cEEEcc-CCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeec-c---
Q 018474 122 EG-VEAI----VPDA--SFTN-DVIAAS-DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHE-G--- 188 (355)
Q Consensus 122 ~g-~~~~----~~~~--~~~~-~l~~d~-dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~-~--- 188 (355)
++ .+.+ .... ..|. ++++++ +|+||+++.. .+.|++|++++. ...+.. .
T Consensus 249 ~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~-----------------~~~I~~~~~~g~-~~~~~g~~~~~ 310 (409)
T 3hrp_A 249 TQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN-----------------LSSVYKITPDGE-CEWFCGSATQK 310 (409)
T ss_dssp TCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETT-----------------TTEEEEECTTCC-EEEEEECTTCC
T ss_pred CCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCC-----------------CCEEEEEecCCC-EEEEEeCCCCC
Confidence 45 5444 2111 2345 999999 5899999876 568999998654 444432 1
Q ss_pred -----------ccccccEEEeCCCCEEEEEeC-CCCeEEEEEeCCCCCcceeEeccc---------C-----CCCcCceE
Q 018474 189 -----------FYFANGIALSKNEDFVVVCES-WKFRCRRYWLKGDRAGILDAFIEN---------L-----PGGPDNIN 242 (355)
Q Consensus 189 -----------~~~pngi~~~~dg~~l~v~~~-~~~~i~~~~~~~~~~~~~~~~~~~---------~-----~g~p~~i~ 242 (355)
+..|+|++++++|+ +|++++ ..++|.++++... ....+... . -..|.+++
T Consensus 311 g~~dg~~~~~~~~~P~gia~d~dG~-lyvad~~~~~~I~~~~~~~G---~v~~~~g~~~~~g~~~g~~~~~~~~~P~gia 386 (409)
T 3hrp_A 311 TVQDGLREEALFAQPNGMTVDEDGN-FYIVDGFKGYCLRKLDILDG---YVSTVAGQVDVASQIDGTPLEATFNYPYDIC 386 (409)
T ss_dssp SCBCEEGGGCBCSSEEEEEECTTCC-EEEEETTTTCEEEEEETTTT---EEEEEEECTTCBSCCCBSTTTCCBSSEEEEE
T ss_pred CcCCCcccccEeCCCeEEEEeCCCC-EEEEeCCCCCEEEEEECCCC---EEEEEeCCCCCCCcCCCChhceEeCCceEEE
Confidence 45699999999998 999999 9999999995322 22222211 0 13589999
Q ss_pred ECCCCCEEEEeec
Q 018474 243 LAPDGSFWIGLIK 255 (355)
Q Consensus 243 ~d~~G~lwv~~~~ 255 (355)
+|++|+|||+...
T Consensus 387 vd~~g~lyVad~~ 399 (409)
T 3hrp_A 387 YDGEGGYWIAEAW 399 (409)
T ss_dssp ECSSSEEEEEEST
T ss_pred EcCCCCEEEEECC
Confidence 9999999999976
No 52
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.66 E-value=4.5e-14 Score=129.39 Aligned_cols=242 Identities=12% Similarity=0.167 Sum_probs=155.0
Q ss_pred CCCCceEEEeeCCCeEEEEec---CCEEEEEEcCCCeeEEeec---cCCCcccCeEECCCCC-EEEEeCCCc-EEEEc--
Q 018474 51 VNHPEDVSVVVSKGALYTATR---DGWVKYFILHNETLVNWKH---IDSQSLLGLTTTKDGG-VILCDNEKG-LLKVT-- 120 (355)
Q Consensus 51 ~~~p~~i~~d~~~g~l~~~~~---~g~i~~~~~~~g~~~~~~~---~~~~p~~gl~~d~~g~-L~v~~~~~g-l~~~~-- 120 (355)
...|.++++++ +|.+|++.. ++.|+.++..+++.+.+.. ....|. +++++++|+ ||++....+ +..++
T Consensus 39 ~~~p~~~a~sp-dg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~-~~a~spdg~~l~~~~~~~~~v~v~~~~ 116 (347)
T 3hfq_A 39 TQNPTYLALSA-KDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPA-YVAVDEARQLVYSANYHKGTAEVMKIA 116 (347)
T ss_dssp CSCCCCEEECT-TCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCS-EEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred cCCcceEEEcc-CCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCE-EEEECCCCCEEEEEeCCCCEEEEEEeC
Confidence 47899999995 555888765 4789999987777554433 356788 999999997 788875544 44444
Q ss_pred CCC-eEEEc---CCc---------CCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCC-CCeEEEee
Q 018474 121 EEG-VEAIV---PDA---------SFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPK-LKETTVLH 186 (355)
Q Consensus 121 ~~g-~~~~~---~~~---------~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~-~~~~~~~~ 186 (355)
.+| .+.+. ... ..++++++++||++|+++.. .+.+..|+.+ ++++....
T Consensus 117 ~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~-----------------~~~v~~~~~~~~g~~~~~~ 179 (347)
T 3hfq_A 117 ADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLG-----------------SDKVYVYNVSDAGQLSEQS 179 (347)
T ss_dssp TTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETT-----------------TTEEEEEEECTTSCEEEEE
T ss_pred CCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCC-----------------CCEEEEEEECCCCcEEEee
Confidence 355 43322 111 24778999999999988765 3467777665 55554332
Q ss_pred ----ccccccccEEEeCCCCEEEEEeCCCCeEEEEEeCC--CCCcceeEecccCC------CCcCceEECCCCC-EEEEe
Q 018474 187 ----EGFYFANGIALSKNEDFVVVCESWKFRCRRYWLKG--DRAGILDAFIENLP------GGPDNINLAPDGS-FWIGL 253 (355)
Q Consensus 187 ----~~~~~pngi~~~~dg~~l~v~~~~~~~i~~~~~~~--~~~~~~~~~~~~~~------g~p~~i~~d~~G~-lwv~~ 253 (355)
.....|++++++|||+.+|+++...+.|..|+++. ........+. ..+ ..|.+++++++|+ +|++.
T Consensus 180 ~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~i~~spdG~~l~v~~ 258 (347)
T 3hfq_A 180 VLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVK-TIPADYTAHNGAAAIRLSHDGHFLYVSN 258 (347)
T ss_dssp EEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEE-SSCTTCCSCCEEEEEEECTTSCEEEEEE
T ss_pred eEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeee-ecCCCCCCCCcceeEEECCCCCEEEEEe
Confidence 12346788999999999999988888999988863 1111111111 122 2356689999998 66766
Q ss_pred ecCCchhhHhhhcchhHHHHHHhccchhhcccCCCCCCceEEEEEeCCCCeE--EEEEECCCCCcccceeEEEEe--CCE
Q 018474 254 IKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKI--IRDFNDPDATYISFVTSAAEF--DGN 329 (355)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~--~~~~~~~~g~~~~~~~~~~~~--~g~ 329 (355)
... ..-.++.+++ +|+. +..+... +. .+..+... +..
T Consensus 259 ~~~----------------------------------~~v~v~~~~~-~g~~~~~~~~~~~-~~---~~~~~~~spdg~~ 299 (347)
T 3hfq_A 259 RGY----------------------------------NTLAVFAVTA-DGHLTLIQQISTE-GD---FPRDFDLDPTEAF 299 (347)
T ss_dssp ETT----------------------------------TEEEEEEECG-GGCEEEEEEEECS-SS---CCCEEEECTTSSE
T ss_pred CCC----------------------------------CEEEEEEECC-CCcEEEeEEEecC-CC---CcCeEEECCCCCE
Confidence 531 1113444444 5533 3333332 21 23445544 457
Q ss_pred EEEeecCCCeEEEeeCCCCCCC
Q 018474 330 LYLASLQSNFIGILPLDGPEPQ 351 (355)
Q Consensus 330 L~v~~~~~~~i~~~~~~~~~~~ 351 (355)
||+++..++.|.+++++...-+
T Consensus 300 l~v~~~~~~~v~v~~~d~~tg~ 321 (347)
T 3hfq_A 300 VVVVNQNTDNATLYARDLTSGK 321 (347)
T ss_dssp EEEEETTTTEEEEEEECTTTCC
T ss_pred EEEEEcCCCcEEEEEEeCCCCe
Confidence 9999998899999977655433
No 53
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.65 E-value=1e-14 Score=144.38 Aligned_cols=187 Identities=14% Similarity=0.158 Sum_probs=134.5
Q ss_pred CCCCCCceEEEeeCCCeEEEEec-CCEEEEEEcCCCe-eEEeecc-CCCcccCeEECC-CCCEEEEeCCCc-EEEEcCCC
Q 018474 49 GCVNHPEDVSVVVSKGALYTATR-DGWVKYFILHNET-LVNWKHI-DSQSLLGLTTTK-DGGVILCDNEKG-LLKVTEEG 123 (355)
Q Consensus 49 ~~~~~p~~i~~d~~~g~l~~~~~-~g~i~~~~~~~g~-~~~~~~~-~~~p~~gl~~d~-~g~L~v~~~~~g-l~~~~~~g 123 (355)
..+..|.+|++++.++.+|++.. +++|.++++.... .+.+... ...|. ||++|. .++||+++...+ |.+++.+|
T Consensus 37 ~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~-GlAvD~~~~~ly~~d~~~~~I~v~~~dG 115 (619)
T 3s94_A 37 GGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPD-GLACDWLGEKLYWTDSETNRIEVSNLDG 115 (619)
T ss_dssp BCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEE-EEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred cCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcC-eEEEEecCCEEEEEeCCCCEEEEEECCC
Confidence 34788999999977888887664 7899999984432 2333322 35799 999997 678999998755 55666666
Q ss_pred --eEEEc-CCcCCcccEEEccC-CcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEee-ccccccccEEEe
Q 018474 124 --VEAIV-PDASFTNDVIAASD-GTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH-EGFYFANGIALS 198 (355)
Q Consensus 124 --~~~~~-~~~~~~~~l~~d~d-G~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~-~~~~~pngi~~~ 198 (355)
.+.+. .....|++|++|+. |.||++|... .+.+++.++++...+.+. ..+..|+||+++
T Consensus 116 ~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~----------------~~~I~r~~~dG~~~~~l~~~~~~~P~Glald 179 (619)
T 3s94_A 116 SLRKVLFWQELDQPRAIALDPSSGFMYWTDWGE----------------VPKIERAGMDGSSRFIIINSEIYWPNGLTLD 179 (619)
T ss_dssp CSCEEEECSSCSCCCCEEEETTTTEEEEEECSS----------------SCEEEEEETTSCSCEEEECSSCSSEEEEEEE
T ss_pred CCEEEEEeCCCCCCceEEEecCCCeEEEeccCC----------------CCEEEEEECCCCceEEEEeCCCCCCcEEEEE
Confidence 55554 44588999999985 7999998641 357999988766555444 567889999999
Q ss_pred CCCCEEEEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCCEEEEeecC
Q 018474 199 KNEDFVVVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIKM 256 (355)
Q Consensus 199 ~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~ 256 (355)
++++.|||++...++|++++++|.. .+.+.......|.+++++.+ ++|++....
T Consensus 180 ~~~~~LY~aD~~~~~I~~~~~dG~~---~~~~~~~~~~~P~gi~~~~~-~ly~td~~~ 233 (619)
T 3s94_A 180 YEEQKLYWADAKLNFIHKSNLDGTN---RQAVVKGSLPHPFALTLFED-ILYWTDWST 233 (619)
T ss_dssp TTTTEEEEEETTTCCEEEESSSCCE---EC---------CCCEEESSS-EEEEECTTT
T ss_pred ccCCEEEEEeCCCCeEEEecCCCCc---cEEEEeCCCCCceEEEEeCC-EEEEecCCC
Confidence 9988999999999999999997732 22233222346899999876 788888653
No 54
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.65 E-value=3.2e-14 Score=131.52 Aligned_cols=202 Identities=16% Similarity=0.209 Sum_probs=130.8
Q ss_pred ceEecCCCCCCCceEEEeeCCCeEEEEecCCEEEEEEcCCCeeEEeec------cCCCcccCeEECCC----CCEEEEeC
Q 018474 43 LTKLGEGCVNHPEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKH------IDSQSLLGLTTTKD----GGVILCDN 112 (355)
Q Consensus 43 ~~~~~~~~~~~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~~~------~~~~p~~gl~~d~~----g~L~v~~~ 112 (355)
.+.+..+ +..|++|+++ .+|.+|++...|+|++++ +++.+.+.. ....|. ||+++++ +.|||+..
T Consensus 23 ~~~va~~-l~~P~~ia~~-pdG~l~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~-gia~~pdf~~~g~lYv~~~ 97 (352)
T 2ism_A 23 VEEVVGG-LEVPWALAFL-PDGGMLIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLL-GLALHPRFPQEPYVYAYRT 97 (352)
T ss_dssp EEEEECC-CSCEEEEEEC-TTSCEEEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEE-EEEECTTTTTSCEEEEEEE
T ss_pred EEEEECC-CCCceEEEEc-CCCeEEEEeCCCeEEEEE--CCCccEeecceEeecCCCCce-eEEECCCCCCCCEEEEEEe
Confidence 4566655 7899999999 567799999899999998 565544321 235689 9999987 78999876
Q ss_pred C------CcEEEEcC-CC-e---EE----EcC--C-cCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEE
Q 018474 113 E------KGLLKVTE-EG-V---EA----IVP--D-ASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRK 174 (355)
Q Consensus 113 ~------~gl~~~~~-~g-~---~~----~~~--~-~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~ 174 (355)
. ..|++++. .+ + +. +.. . ...++++++++||.||+++..... ...... .....|.++|
T Consensus 98 ~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~--~~~~~d--~~~~~g~I~r 173 (352)
T 2ism_A 98 VAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYE--RELAQD--LASLGGKILR 173 (352)
T ss_dssp ECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTC--GGGGGC--TTCSSSEEEE
T ss_pred cCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCC--CccccC--CCCCceEEEE
Confidence 3 46888873 32 2 22 221 1 257889999999999999754210 000001 1133579999
Q ss_pred EeCCC-------------CeEEEeeccccccccEEEeCCCCEEEEEeCCCCe--------EEEEEeCCCCCcc-------
Q 018474 175 YDPKL-------------KETTVLHEGFYFANGIALSKNEDFVVVCESWKFR--------CRRYWLKGDRAGI------- 226 (355)
Q Consensus 175 ~dp~~-------------~~~~~~~~~~~~pngi~~~~dg~~l~v~~~~~~~--------i~~~~~~~~~~~~------- 226 (355)
+++++ ...+.+..++.+|+|++++++...||+++...++ |.++.. +...+.
T Consensus 174 i~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~-G~nyGwp~~~g~~ 252 (352)
T 2ism_A 174 LTPEGEPAPGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVP-GGNYGWPRVVGRG 252 (352)
T ss_dssp ECTTSSBCTTCTTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCEEEEECT-TCBCCTTTCCSCC
T ss_pred EcCCCCCCCCCcccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEecc-CCcCCCCcccCCC
Confidence 99975 2344566778889999999944449999987766 444432 221110
Q ss_pred -----eeEecc-cCCCCcCceEECCCCCEEEEeec
Q 018474 227 -----LDAFIE-NLPGGPDNINLAPDGSFWIGLIK 255 (355)
Q Consensus 227 -----~~~~~~-~~~g~p~~i~~d~~G~lwv~~~~ 255 (355)
...... .....|.++++ .+|++|++...
T Consensus 253 ~~~~~~~p~~~~~~~~ap~G~~~-~~G~l~v~~~~ 286 (352)
T 2ism_A 253 NDPRYRDPLYFWPQGFPPGNLAF-FRGDLYVAGLR 286 (352)
T ss_dssp CCTTSCCCSEECTTCCCEEEEEE-ETTEEEEEETT
T ss_pred CCCCCcCCeEecCCCCCCcceEE-ECCEEEEEECC
Confidence 000100 11124788888 46899999865
No 55
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.64 E-value=1.2e-14 Score=132.98 Aligned_cols=198 Identities=13% Similarity=0.181 Sum_probs=136.3
Q ss_pred CCcccCeEECCCCCEEEEeCCC-------------------------cEEEEcC-CC-e-EEEcC-CcCCcccEEEccCC
Q 018474 93 SQSLLGLTTTKDGGVILCDNEK-------------------------GLLKVTE-EG-V-EAIVP-DASFTNDVIAASDG 143 (355)
Q Consensus 93 ~~p~~gl~~d~~g~L~v~~~~~-------------------------gl~~~~~-~g-~-~~~~~-~~~~~~~l~~d~dG 143 (355)
+.+. ++++|++|++||++..+ .+++++. +| + +.... ....|+++++|++|
T Consensus 24 ~~v~-~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 24 GQVS-GVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp SCEE-EEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred CCce-EEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 5688 99999999999998765 3788885 57 4 33332 23789999999999
Q ss_pred cEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCC--eEEEee---------ccccccccEEEeC-CCCEEEEEeC-C
Q 018474 144 TLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLK--ETTVLH---------EGFYFANGIALSK-NEDFVVVCES-W 210 (355)
Q Consensus 144 ~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~--~~~~~~---------~~~~~pngi~~~~-dg~~l~v~~~-~ 210 (355)
++|+++.. .+.+++||+++. .+..+. ..+..|+++++++ +++ +|++++ .
T Consensus 103 ~l~v~d~~-----------------~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~-lyv~d~~~ 164 (329)
T 3fvz_A 103 NYWVTDVA-----------------LHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGA-VFVSDGYC 164 (329)
T ss_dssp CEEEEETT-----------------TTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCC-EEEEECSS
T ss_pred CEEEEECC-----------------CCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCe-EEEEeCCC
Confidence 99999875 468999998755 233332 2345799999999 565 999997 6
Q ss_pred CCeEEEEEeCCCCCcceeEeccc------CCCCcCceEECCC-CCEEEEeecCCchhhHhhhcchhHHHHHHhccchhhc
Q 018474 211 KFRCRRYWLKGDRAGILDAFIEN------LPGGPDNINLAPD-GSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISL 283 (355)
Q Consensus 211 ~~~i~~~~~~~~~~~~~~~~~~~------~~g~p~~i~~d~~-G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (355)
.++|.+|+.++............ .-..|.++++|++ |++||+....
T Consensus 165 ~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~--------------------------- 217 (329)
T 3fvz_A 165 NSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADREN--------------------------- 217 (329)
T ss_dssp CCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTT---------------------------
T ss_pred CCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCC---------------------------
Confidence 89999999655322111110000 0124899999998 8999998652
Q ss_pred ccCCCCCCceEEEEEeCCCCeEEEEEECCCCCcccceeE-------EEEeCCEEEEeecCCCeEEEeeCCC
Q 018474 284 LLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTS-------AAEFDGNLYLASLQSNFIGILPLDG 347 (355)
Q Consensus 284 ~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~-------~~~~~g~L~v~~~~~~~i~~~~~~~ 347 (355)
+.|.+|++++|+.+..+..+.. ...+.. +...+|++|+++.....|.++++.+
T Consensus 218 ---------~~I~~~~~~~G~~~~~~~~~~~--~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~ 277 (329)
T 3fvz_A 218 ---------GRIQCFKTDTKEFVREIKHASF--GRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSS 277 (329)
T ss_dssp ---------TEEEEEETTTCCEEEEECCTTT--TTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTT
T ss_pred ---------CEEEEEECCCCcEEEEEecccc--CCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCC
Confidence 4799999933998888854321 111222 2233566777777777888877543
No 56
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.64 E-value=2.5e-14 Score=128.90 Aligned_cols=180 Identities=13% Similarity=0.113 Sum_probs=130.7
Q ss_pred CCCceEEEeeCCCeEEEEecCCEEEEEEcCCCeeEEe-ecc-----CCCcccCeEECCCCCEEEEeCC------------
Q 018474 52 NHPEDVSVVVSKGALYTATRDGWVKYFILHNETLVNW-KHI-----DSQSLLGLTTTKDGGVILCDNE------------ 113 (355)
Q Consensus 52 ~~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~-~~~-----~~~p~~gl~~d~~g~L~v~~~~------------ 113 (355)
..|.+++++++++.+|+++..++|++++++ ++...+ ... ...|. ++++|++|++|+++..
T Consensus 71 ~~~~~i~~~~~~g~l~v~~~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~-~i~~d~~g~l~v~~~~~~~~~~~~~~~~ 148 (314)
T 1pjx_A 71 GIPAGCQCDRDANQLFVADMRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCN-DCAFDYEGNLWITAPAGEVAPADYTRSM 148 (314)
T ss_dssp CCEEEEEECSSSSEEEEEETTTEEEEEETT-SCEEECCSBCTTSCBCBCCC-EEEECTTSCEEEEECBCBCTTSCCCBTT
T ss_pred CCCceEEEecCCCcEEEEECCCCEEEEeCC-CCEEEEEeccCCCccccCCc-CEEECCCCCEEEEecCcccccccccccc
Confidence 568999999433899999877789999997 877665 321 13478 9999999999999864
Q ss_pred ----CcEEEEcCCC-eEEEcCCcCCcccEEEc----cCC-cEEEEeCCCCCCCccccccccccCCCCeEEEEeCC-CCeE
Q 018474 114 ----KGLLKVTEEG-VEAIVPDASFTNDVIAA----SDG-TLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPK-LKET 182 (355)
Q Consensus 114 ----~gl~~~~~~g-~~~~~~~~~~~~~l~~d----~dG-~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~-~~~~ 182 (355)
.++++++.++ .+.+......+++++++ ++| .+|+++.. .+++++||++ ++++
T Consensus 149 ~~~~~~l~~~~~~g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~-----------------~~~i~~~~~~~~g~~ 211 (314)
T 1pjx_A 149 QEKFGSIYCFTTDGQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETP-----------------TKKLWSYDIKGPAKI 211 (314)
T ss_dssp SSSCEEEEEECTTSCEEEEEEEESSEEEEEEEECTTSCEEEEEEEETT-----------------TTEEEEEEEEETTEE
T ss_pred cCCCCeEEEECCCCCEEEeccCCCCcceEEEecccCCCCCEEEEEECC-----------------CCeEEEEECCCCCcc
Confidence 3689998657 55544333678999999 999 69998754 4578888864 4543
Q ss_pred E---Eee--c-cc-cccccEEEeCCCCEEEEEeCCCCeEEEEEeC-CCCCcceeEecccCCCCcCceEECCCCC-EEEEe
Q 018474 183 T---VLH--E-GF-YFANGIALSKNEDFVVVCESWKFRCRRYWLK-GDRAGILDAFIENLPGGPDNINLAPDGS-FWIGL 253 (355)
Q Consensus 183 ~---~~~--~-~~-~~pngi~~~~dg~~l~v~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~g~p~~i~~d~~G~-lwv~~ 253 (355)
. .+. . .. ..|.+++++++|+ +|+++...++|.+|+.+ +... ..+. .....|.+++++++|+ +|+++
T Consensus 212 ~~~~~~~~~~~~~~~~p~~i~~d~~G~-l~v~~~~~~~i~~~d~~~g~~~---~~~~-~~~~~~~~i~~~~dg~~l~v~~ 286 (314)
T 1pjx_A 212 ENKKVWGHIPGTHEGGADGMDFDEDNN-LLVANWGSSHIEVFGPDGGQPK---MRIR-CPFEKPSNLHFKPQTKTIFVTE 286 (314)
T ss_dssp EEEEEEEECCCCSSCEEEEEEEBTTCC-EEEEEETTTEEEEECTTCBSCS---EEEE-CSSSCEEEEEECTTSSEEEEEE
T ss_pred ccceEEEECCCCCCCCCCceEECCCCC-EEEEEcCCCEEEEEcCCCCcEe---EEEe-CCCCCceeEEECCCCCEEEEEe
Confidence 2 111 1 11 5689999999997 89998778899999976 3222 1121 1124578899999998 99998
Q ss_pred ec
Q 018474 254 IK 255 (355)
Q Consensus 254 ~~ 255 (355)
..
T Consensus 287 ~~ 288 (314)
T 1pjx_A 287 HE 288 (314)
T ss_dssp TT
T ss_pred CC
Confidence 54
No 57
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=99.64 E-value=4.8e-14 Score=143.25 Aligned_cols=226 Identities=14% Similarity=0.191 Sum_probs=148.4
Q ss_pred CceEEEeeCCCeEEEEecCCEEEEEEcCCCeeEEeecc-------CCCcccCeEECCCCCEEEEeCCCcEEEEcC-C---
Q 018474 54 PEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHI-------DSQSLLGLTTTKDGGVILCDNEKGLLKVTE-E--- 122 (355)
Q Consensus 54 p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~~~~-------~~~p~~gl~~d~~g~L~v~~~~~gl~~~~~-~--- 122 (355)
..+|+.| .+|.||+++ +++|.++++++++++.+... ...+. .++.|++|+||+++..+||+++++ +
T Consensus 375 v~~i~~d-~~g~lWigt-~~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~i~~d~~g~lWigT~~~Gl~~~~~~~~~~ 451 (758)
T 3ott_A 375 IRHIYED-KEQQLWIAT-DGSINRYDYATRQFIHYNIVDNTGTYNTNWTY-YIFEDTAGQLWISTCLGGIFVVDKHKLMQ 451 (758)
T ss_dssp EEEEEEC-TTSCEEEEE-TTEEEEEETTTTEEEEEEEECCC--CBSSSEE-EEEECTTSEEEEEESSSCEEEEEHHHHHH
T ss_pred eEEEEEC-CCCCEEEEe-CCcHhhcCcCCCcEEEeecCCCcCCCCCceEE-EEEEcCCCCEEEEECCCceEEEccccccc
Confidence 4578888 788999999 56899999989988776421 12356 788999999999998789999984 2
Q ss_pred ---C-e---EEEcCC--c--CCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeecc-c-
Q 018474 123 ---G-V---EAIVPD--A--SFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEG-F- 189 (355)
Q Consensus 123 ---g-~---~~~~~~--~--~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~-~- 189 (355)
+ . +.+... . ..++++..|++|+||+.... .++|++||+++++++.+... +
T Consensus 452 ~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~~~t-----------------~~Gl~~~d~~~~~~~~~~~~~~~ 514 (758)
T 3ott_A 452 STSGQYIAEQNYSVHNGLSGMFINQIIPDNEGNVWVLLYN-----------------NKGIDKINPRTREVTKLFADELT 514 (758)
T ss_dssp CCSSEEECSEEECGGGTCSCSCEEEEEECTTSCEEEEETT-----------------CSSEEEEETTTTEEEEECTTTSC
T ss_pred cCCcceecccccccccccccceeeeEEEcCCCCEEEEccC-----------------CCCcEEEeCCCCceEEecCCCcC
Confidence 2 2 122111 1 45788999999999993211 24799999999888776422 1
Q ss_pred --cccccEEEeCCCCEEEEEeCCCCeEEEEEeCCCCCcceeEecccCCC-CcCceEECCCCCEEEEeecCCchhhHhhhc
Q 018474 190 --YFANGIALSKNEDFVVVCESWKFRCRRYWLKGDRAGILDAFIENLPG-GPDNINLAPDGSFWIGLIKMNQTGVRAIQK 266 (355)
Q Consensus 190 --~~pngi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g-~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~ 266 (355)
..++.+..+.+|+ +|++. .++|.+|+.+......+. .+.++. ....+..| +|+||+++..
T Consensus 515 ~~~~~~~i~~d~~g~-lWigt--~~Gl~~~~~~~~~~~~~~--~~gl~~~~i~~i~~~-~g~lWi~t~~----------- 577 (758)
T 3ott_A 515 GEKSPNYLLCDEDGL-LWVGF--HGGVMRINPKDESQQSIS--FGSFSNNEILSMTCV-KNSIWVSTTN----------- 577 (758)
T ss_dssp GGGCEEEEEECTTSC-EEEEE--TTEEEEECC--CCCCBCC--CCC---CCEEEEEEE-TTEEEEEESS-----------
T ss_pred CCcccceEEECCCCC-EEEEe--cCceEEEecCCCceEEec--ccCCCccceEEEEEC-CCCEEEECCC-----------
Confidence 2356778888887 88875 368999997554332221 112221 12334555 7999999964
Q ss_pred chhHHHHHHhccchhhcccCCCCCCceEEEEEeCCCCeEEEEEECCCCCcccceeEEEE-eCCEEEEeecCCCeEEEeeC
Q 018474 267 CREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAE-FDGNLYLASLQSNFIGILPL 345 (355)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~ 345 (355)
|+.+|+| +...+..|..++.. +. ..+.. .+|+||+|+. +.+.++..
T Consensus 578 ---------------------------Gl~~~~~-~~~~~~~~~~~~~~-~~--~~~~~~~~G~l~fG~~--~Gl~~f~p 624 (758)
T 3ott_A 578 ---------------------------GLWIIDR-KTMDARQQNMTNKR-FT--SLLFDPKEDCVYLGGA--DGFGISHS 624 (758)
T ss_dssp ---------------------------CEEEEET-TTCCEEEC--CCCC-CS--EEEEETTTTEEEEECB--SEEEEEEC
T ss_pred ---------------------------CeEEEcC-CCceeEEecCCCCc-ee--eeEEECCCCcEEEecC--CceEEECh
Confidence 6999999 55556666555543 22 22333 3699999995 56777776
Q ss_pred CCCC
Q 018474 346 DGPE 349 (355)
Q Consensus 346 ~~~~ 349 (355)
....
T Consensus 625 ~~~~ 628 (758)
T 3ott_A 625 NLEA 628 (758)
T ss_dssp ---C
T ss_pred hhcc
Confidence 5443
No 58
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=99.64 E-value=2.1e-14 Score=145.93 Aligned_cols=225 Identities=12% Similarity=0.144 Sum_probs=148.4
Q ss_pred ceEEEeeCCCeEEEEecCCEEEEEEcCCC---eeEEeecc-------CCCcccCeEECCCCCEEEEeCCCcEEEEcC-CC
Q 018474 55 EDVSVVVSKGALYTATRDGWVKYFILHNE---TLVNWKHI-------DSQSLLGLTTTKDGGVILCDNEKGLLKVTE-EG 123 (355)
Q Consensus 55 ~~i~~d~~~g~l~~~~~~g~i~~~~~~~g---~~~~~~~~-------~~~p~~gl~~d~~g~L~v~~~~~gl~~~~~-~g 123 (355)
.+|..| ++|.||+++. ++++++++.++ ++..+... ...+. +|..|++|+||+++ .+||+++++ ++
T Consensus 327 ~~i~~D-~~g~lWiGt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~-~i~~d~~g~lWigt-~~GL~~~~~~~~ 402 (758)
T 3ott_A 327 YSLFRD-SKGFYWFGGA-NGLIRFTDPAGERHDAIWYRMGDKTYPLSHNRIR-HIYEDKEQQLWIAT-DGSINRYDYATR 402 (758)
T ss_dssp EEEEEC-TTCCEEEEET-TEEEEESCTTSSCCCCEEECTTCSSSCCSCSCEE-EEEECTTSCEEEEE-TTEEEEEETTTT
T ss_pred EEEEEc-CCCCEEEeeC-CcceeecccccccceeEEeccCCcCCCCCCCceE-EEEECCCCCEEEEe-CCcHhhcCcCCC
Confidence 467788 7899999985 56999987654 23333211 12356 78899999999999 459999995 66
Q ss_pred -eEEEc--CC-----cCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCC------CeEE---Eee
Q 018474 124 -VEAIV--PD-----ASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKL------KETT---VLH 186 (355)
Q Consensus 124 -~~~~~--~~-----~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~------~~~~---~~~ 186 (355)
++.+. .. ...+.++..|++|+||+++. .++|++||+++ +.+. .+.
T Consensus 403 ~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigT~------------------~~Gl~~~~~~~~~~~~~~~~~~~~~~~ 464 (758)
T 3ott_A 403 QFIHYNIVDNTGTYNTNWTYYIFEDTAGQLWISTC------------------LGGIFVVDKHKLMQSTSGQYIAEQNYS 464 (758)
T ss_dssp EEEEEEEECCC--CBSSSEEEEEECTTSEEEEEES------------------SSCEEEEEHHHHHHCCSSEEECSEEEC
T ss_pred cEEEeecCCCcCCCCCceEEEEEEcCCCCEEEEEC------------------CCceEEEccccccccCCcceecccccc
Confidence 55543 11 14577889999999999853 24788888653 2221 111
Q ss_pred --cccc--ccccEEEeCCCCEEEEEeCCCCeEEEEEeCCCCCcceeEec-ccCC--CCcCceEECCCCCEEEEeecCCch
Q 018474 187 --EGFY--FANGIALSKNEDFVVVCESWKFRCRRYWLKGDRAGILDAFI-ENLP--GGPDNINLAPDGSFWIGLIKMNQT 259 (355)
Q Consensus 187 --~~~~--~pngi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~--g~p~~i~~d~~G~lwv~~~~~~~~ 259 (355)
.++. ....+..+++|+ +|+.....++|.+|+.+.. ..+.+. +.+. ..+..+..|++|++|+++..
T Consensus 465 ~~~~l~~~~i~~i~~d~~g~-lWi~~~t~~Gl~~~d~~~~---~~~~~~~~~~~~~~~~~~i~~d~~g~lWigt~~---- 536 (758)
T 3ott_A 465 VHNGLSGMFINQIIPDNEGN-VWVLLYNNKGIDKINPRTR---EVTKLFADELTGEKSPNYLLCDEDGLLWVGFHG---- 536 (758)
T ss_dssp GGGTCSCSCEEEEEECTTSC-EEEEETTCSSEEEEETTTT---EEEEECTTTSCGGGCEEEEEECTTSCEEEEETT----
T ss_pred cccccccceeeeEEEcCCCC-EEEEccCCCCcEEEeCCCC---ceEEecCCCcCCCcccceEEECCCCCEEEEecC----
Confidence 1221 234577788887 8873233478999997543 233332 1111 13455788999999999853
Q ss_pred hhHhhhcchhHHHHHHhccchhhcccCCCCCCceEEEEEeCCCCeEEEEEECCCCCcccceeEEEEeCCEEEEeecCCCe
Q 018474 260 GVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFDGNLYLASLQSNF 339 (355)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~~~ 339 (355)
|+.+|++ +.+.+..|. .+|+..+.+.++.+++|+||+++ .+.
T Consensus 537 ----------------------------------Gl~~~~~-~~~~~~~~~-~~gl~~~~i~~i~~~~g~lWi~t--~~G 578 (758)
T 3ott_A 537 ----------------------------------GVMRINP-KDESQQSIS-FGSFSNNEILSMTCVKNSIWVST--TNG 578 (758)
T ss_dssp ----------------------------------EEEEECC---CCCCBCC-CCC---CCEEEEEEETTEEEEEE--SSC
T ss_pred ----------------------------------ceEEEec-CCCceEEec-ccCCCccceEEEEECCCCEEEEC--CCC
Confidence 7999999 555455554 35665667888888899999999 467
Q ss_pred EEEeeCCC
Q 018474 340 IGILPLDG 347 (355)
Q Consensus 340 i~~~~~~~ 347 (355)
|.+++..+
T Consensus 579 l~~~~~~~ 586 (758)
T 3ott_A 579 LWIIDRKT 586 (758)
T ss_dssp EEEEETTT
T ss_pred eEEEcCCC
Confidence 88887654
No 59
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.62 E-value=1.1e-13 Score=140.11 Aligned_cols=184 Identities=14% Similarity=0.107 Sum_probs=133.7
Q ss_pred CCCCceEEEeeCCCeEEEEec-CCEEEEEEcCCC----eeEEeec-cCCCcccCeEECCCC-CEEEEeCCCc-EEEEcCC
Q 018474 51 VNHPEDVSVVVSKGALYTATR-DGWVKYFILHNE----TLVNWKH-IDSQSLLGLTTTKDG-GVILCDNEKG-LLKVTEE 122 (355)
Q Consensus 51 ~~~p~~i~~d~~~g~l~~~~~-~g~i~~~~~~~g----~~~~~~~-~~~~p~~gl~~d~~g-~L~v~~~~~g-l~~~~~~ 122 (355)
+..|.+|++++.++.||++.. +++|++++.... ....+.. ....|. ||++|..+ +||+++...+ |.+++.+
T Consensus 423 ~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~-GLAvD~~~~~LY~tD~~~~~I~v~~ld 501 (791)
T 3m0c_C 423 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD-GLAVDWIHSNIYWTDSVLGTVSVADTK 501 (791)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC-EEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcc-eeeeeecCCcEEEEecCCCeEEEEeCC
Confidence 688999999976888887665 688999988432 2233332 346799 99999654 8999998754 6666766
Q ss_pred C--eEEEc-CCcCCcccEEEccC-CcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEee-ccccccccEEE
Q 018474 123 G--VEAIV-PDASFTNDVIAASD-GTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH-EGFYFANGIAL 197 (355)
Q Consensus 123 g--~~~~~-~~~~~~~~l~~d~d-G~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~-~~~~~pngi~~ 197 (355)
| .+++. .....|++|++|+. |.||++|... ...|.+++.++...+.+. .++..|+||++
T Consensus 502 G~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~----------------~~~I~~~~~dG~~~~~lv~~~l~~P~GLav 565 (791)
T 3m0c_C 502 GVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGT----------------PAKIKKGGLNGVDIYSLVTENIQWPNGITL 565 (791)
T ss_dssp SSSEEEEEECTTCCEEEEEEETTTTEEEEEECSS----------------SCEEEEEETTSCCEEEEECSSCSCEEEEEE
T ss_pred CCeEEEEEeCCCCCcceEEEecCCCCEEEecCCC----------------CCeEEEEecCCCceEEEEeCCCCCceEEEE
Confidence 6 44444 34478999999985 7999998651 257999998776665554 46788999999
Q ss_pred eCCCCEEEEEeCCCCeEEEEEeCCCCCcceeEecccC--CCCcCceEECCCCCEEEEeec
Q 018474 198 SKNEDFVVVCESWKFRCRRYWLKGDRAGILDAFIENL--PGGPDNINLAPDGSFWIGLIK 255 (355)
Q Consensus 198 ~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~--~g~p~~i~~d~~G~lwv~~~~ 255 (355)
+++++.|||++...++|.+++++|... +.++... -..|.++.++. ++||++...
T Consensus 566 D~~~~~LYwaD~~~~~I~~~d~dG~~~---~~v~~~~~~l~~P~glav~~-~~lYwtD~~ 621 (791)
T 3m0c_C 566 DLLSGRLYWVDSKLHSISSIDVNGGNR---KTILEDEKRLAHPFSLAVFE-DKVFWTDII 621 (791)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSCSC---EEEEECTTTTSSEEEEEEET-TEEEEEETT
T ss_pred ecCCCeEEEEeCCCCcEEEEecCCCce---EEEecCCCccCCCCEEEEeC-CEEEEEECC
Confidence 988889999999999999999987432 2233221 12467787764 579998865
No 60
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.62 E-value=8e-14 Score=138.15 Aligned_cols=190 Identities=12% Similarity=0.059 Sum_probs=138.7
Q ss_pred ecCCCCCCCceEEEeeCCCeEEEEec-CCEEEEEEcCCCeeE-Eeec------cCCCcccCeEECCC-CCEEEEeCCCcE
Q 018474 46 LGEGCVNHPEDVSVVVSKGALYTATR-DGWVKYFILHNETLV-NWKH------IDSQSLLGLTTTKD-GGVILCDNEKGL 116 (355)
Q Consensus 46 ~~~~~~~~p~~i~~d~~~g~l~~~~~-~g~i~~~~~~~g~~~-~~~~------~~~~p~~gl~~d~~-g~L~v~~~~~gl 116 (355)
++...+..+.+|.+|+.++.+|++.. .++|++++....... .+.. ....|. ||++|.. ++||+++...+.
T Consensus 334 l~~~~~~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~-glAvD~~~~nLY~td~~~~~ 412 (628)
T 4a0p_A 334 LPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQPY-DLSIDIYSRYIYWTCEATNV 412 (628)
T ss_dssp CCCTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC--------CCCEE-EEEEETTTTEEEEEETTTTE
T ss_pred EEehhcCCceEEEEecCCCeEEEEecCcceEEEEEcCCCCceEEEEcccccccccCCcc-eEEeeccCCeEEEEcCCCCE
Confidence 33344677889999977888887764 789999987432222 2222 234799 9999976 569999987664
Q ss_pred E-EEcCCC--eEEEc-CCcCCcccEEEcc-CCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEee-cccc
Q 018474 117 L-KVTEEG--VEAIV-PDASFTNDVIAAS-DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH-EGFY 190 (355)
Q Consensus 117 ~-~~~~~g--~~~~~-~~~~~~~~l~~d~-dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~-~~~~ 190 (355)
+ ..+.+| .+.+. .....|++|++|| +|.||++|... ....|++.++++...+.+. ..+.
T Consensus 413 I~v~~~~G~~~~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~---------------~~~~I~r~~~dG~~~~~l~~~~l~ 477 (628)
T 4a0p_A 413 INVTRLDGRSVGVVLKGEQDRPRAVVVNPEKGYMYFTNLQE---------------RSPKIERAALDGTEREVLFFSGLS 477 (628)
T ss_dssp EEEEETTSCEEEEEEECTTCCEEEEEEETTTTEEEEEEEET---------------TEEEEEEEETTSCSCEEEECSSCS
T ss_pred EEEEECCCCeEEEEEeCCCCceeeEEEecCCCeEEEeecCC---------------CCCeEEEEeCCCCCcEEEEeccCC
Confidence 4 444677 44443 3447899999998 89999998651 1137999998766555554 4688
Q ss_pred ccccEEEeCCCCEEEEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCCEEEEeec
Q 018474 191 FANGIALSKNEDFVVVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIK 255 (355)
Q Consensus 191 ~pngi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~ 255 (355)
.|+||+++++++.|||+++..++|.+++++|.. .+++.......|.+++++. |++|+++..
T Consensus 478 ~P~gla~D~~~~~LYw~D~~~~~I~~~~~dG~~---r~~~~~~~~~~P~glav~~-~~ly~tD~~ 538 (628)
T 4a0p_A 478 KPIALALDSRLGKLFWADSDLRRIESSDLSGAN---RIVLEDSNILQPVGLTVFE-NWLYWIDKQ 538 (628)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCS---CEEEECSSCSCEEEEEEET-TEEEEEETT
T ss_pred CccEEEEeCCCCEEEEEeCCCCEEEEEeCCCCc---eEEEEcCCCCCcEEEEEEC-CEEEEEECC
Confidence 999999999988999999999999999998743 3344433334699999986 789998865
No 61
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.62 E-value=3.3e-15 Score=150.03 Aligned_cols=185 Identities=14% Similarity=0.113 Sum_probs=132.5
Q ss_pred CCCCCceEEEeeCCCeEEEEec-CCEEEEEEcCC----CeeEEee-ccCCCcccCeEEC-CCCCEEEEeCC-CcEEEEcC
Q 018474 50 CVNHPEDVSVVVSKGALYTATR-DGWVKYFILHN----ETLVNWK-HIDSQSLLGLTTT-KDGGVILCDNE-KGLLKVTE 121 (355)
Q Consensus 50 ~~~~p~~i~~d~~~g~l~~~~~-~g~i~~~~~~~----g~~~~~~-~~~~~p~~gl~~d-~~g~L~v~~~~-~gl~~~~~ 121 (355)
.+..|++|++++.++.||++.. +++|+++++.+ .....+. .....|. ||++| ..|+||+++.. +.|.+++.
T Consensus 404 ~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~-glavD~~~g~LY~tD~~~~~I~v~d~ 482 (699)
T 1n7d_A 404 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD-GLAVDWIHSNIYWTDSVLGTVSVADT 482 (699)
T ss_dssp CCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CC-CEECCCSSSBCEECCTTTSCEEEEBS
T ss_pred cCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcc-eEEEEeeCCcEEEEeccCCeEEEEec
Confidence 3678999999977888888754 68899999854 1222222 2234688 99999 56789999876 45778876
Q ss_pred CC--eEEEcC-CcCCcccEEEcc-CCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEe-eccccccccEE
Q 018474 122 EG--VEAIVP-DASFTNDVIAAS-DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVL-HEGFYFANGIA 196 (355)
Q Consensus 122 ~g--~~~~~~-~~~~~~~l~~d~-dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~-~~~~~~pngi~ 196 (355)
+| .+.+.. ....|++|++|+ .|.||+++... .+.|+++++++...+.+ ...+..|+||+
T Consensus 483 dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~----------------~~~I~~~~~dG~~~~~l~~~~l~~PnGla 546 (699)
T 1n7d_A 483 KGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGT----------------PAKIKKGGLNGVDIYSLVTENIQWPNGIT 546 (699)
T ss_dssp SSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSS----------------SCCEEBCCSSSCCCCEESCSSCSSCCCEE
T ss_pred CCCceEEEEeCCCCCcceEEEccCCCcEEEcccCC----------------CCeEEEEeCCCCCeeEEEeCCCCCccEEE
Confidence 55 455543 347899999998 46999998541 25788888765444433 35678899999
Q ss_pred EeCCCCEEEEEeCCCCeEEEEEeCCCCCcceeEeccc--CCCCcCceEECCCCCEEEEeec
Q 018474 197 LSKNEDFVVVCESWKFRCRRYWLKGDRAGILDAFIEN--LPGGPDNINLAPDGSFWIGLIK 255 (355)
Q Consensus 197 ~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~g~p~~i~~d~~G~lwv~~~~ 255 (355)
++++++.|||+++..++|.+++++|. ..+.+... ....|.++++|.+ ++|++...
T Consensus 547 vd~~~~~LY~aD~~~~~I~~~d~dG~---~~~~~~~~~~~~~~P~glavd~~-~lywtd~~ 603 (699)
T 1n7d_A 547 LDLLSGRLYWVDSKLHSISSIDVNGG---NRKTILEDEKRLAHPFSLAVFED-KVFWTDII 603 (699)
T ss_dssp ECTTTCCEEEEETTTTEEEEECSSSS---CCEEECCCSSSCSSCCCCEEETT-EEEEECST
T ss_pred EeccCCEEEEEecCCCeEEEEccCCC---ceEEEEecCCcCCCceEeEEECC-EEEEEeCC
Confidence 99998889999999999999998763 22334321 2246899999875 67777754
No 62
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.61 E-value=1.5e-12 Score=118.00 Aligned_cols=242 Identities=13% Similarity=0.099 Sum_probs=158.2
Q ss_pred CCCCceEEEeeCCCeEEEEec-CCEEEEEEcCCCee-EEeeccCCCcccC-eEECCCCCEEEEeCCC----cEEEEcC-C
Q 018474 51 VNHPEDVSVVVSKGALYTATR-DGWVKYFILHNETL-VNWKHIDSQSLLG-LTTTKDGGVILCDNEK----GLLKVTE-E 122 (355)
Q Consensus 51 ~~~p~~i~~d~~~g~l~~~~~-~g~i~~~~~~~g~~-~~~~~~~~~p~~g-l~~d~~g~L~v~~~~~----gl~~~~~-~ 122 (355)
...| ++++++++..+|++.. ++.|+.+|..+++. .........|. . ++++++|+.+++.... .+..++. +
T Consensus 40 ~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~-~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~ 117 (331)
T 3u4y_A 40 YDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSM-ADVDITPDDQFAVTVTGLNHPFNMQSYSFLK 117 (331)
T ss_dssp CCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCC-CCEEECTTSSEEEECCCSSSSCEEEEEETTT
T ss_pred CCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCc-cceEECCCCCEEEEecCCCCcccEEEEECCC
Confidence 3556 9999977777898876 78999999988875 44444455677 6 9999999844454444 4777774 5
Q ss_pred C--eEEEcCCcCCcccEEEccCCc-EEEEeCCCCCCCccccccccccCCC-CeEEEEeCCCCeEE----Eeecccccccc
Q 018474 123 G--VEAIVPDASFTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEGKPY-GQLRKYDPKLKETT----VLHEGFYFANG 194 (355)
Q Consensus 123 g--~~~~~~~~~~~~~l~~d~dG~-ly~~d~~~~~~~~~~~~~~~~~~~~-g~l~~~dp~~~~~~----~~~~~~~~png 194 (355)
+ +..+... ..++++++++||+ +|+++... .. -.+|.+++. +.+. ........|.+
T Consensus 118 ~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~---------------~~~i~~~~~~~~-g~~~~~~~~~~~~~~~~~~ 180 (331)
T 3u4y_A 118 NKFISTIPIP-YDAVGIAISPNGNGLILIDRSS---------------ANTVRRFKIDAD-GVLFDTGQEFISGGTRPFN 180 (331)
T ss_dssp TEEEEEEECC-TTEEEEEECTTSSCEEEEEETT---------------TTEEEEEEECTT-CCEEEEEEEEECSSSSEEE
T ss_pred CCeEEEEECC-CCccceEECCCCCEEEEEecCC---------------CceEEEEEECCC-CcEeecCCccccCCCCccc
Confidence 5 3433332 5689999999995 88886541 11 234444432 2221 11233456899
Q ss_pred EEEeCCCCEEEEEeCCCCeEEEEEeCCCCC-cceeEecccCCCCcCceEECCCCC-EEEEeecCCchhhHhhhcchhHHH
Q 018474 195 IALSKNEDFVVVCESWKFRCRRYWLKGDRA-GILDAFIENLPGGPDNINLAPDGS-FWIGLIKMNQTGVRAIQKCREKWE 272 (355)
Q Consensus 195 i~~~~dg~~l~v~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~g~p~~i~~d~~G~-lwv~~~~~~~~~~~~~~~~~~~~~ 272 (355)
++++|||+.+|++....+.|..|+++..+. .....+. ....|.+++++++|+ +|++...
T Consensus 181 ~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~--~~~~~~~~~~spdg~~l~v~~~~----------------- 241 (331)
T 3u4y_A 181 ITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVG--TNNLPGTIVVSRDGSTVYVLTES----------------- 241 (331)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEE--CSSCCCCEEECTTSSEEEEECSS-----------------
T ss_pred eEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeecc--CCCCCceEEECCCCCEEEEEEcC-----------------
Confidence 999999999999998889999999865432 1122222 234688999999998 6776543
Q ss_pred HHHhccchhhcccCCCCCCceEEEEEeCCCCeE--EEEEECC---CCCcccceeEEE--EeCCEEEEeecCCCeEEEeeC
Q 018474 273 LLDAYPGLISLLLPMGSDAGARVVKVDGNDGKI--IRDFNDP---DATYISFVTSAA--EFDGNLYLASLQSNFIGILPL 345 (355)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~--~~~~~~~---~g~~~~~~~~~~--~~~g~L~v~~~~~~~i~~~~~ 345 (355)
.+.|..+|.++|+. +..+... ..........+. .++..||+++..++.|.++++
T Consensus 242 -------------------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~ 302 (331)
T 3u4y_A 242 -------------------TVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTI 302 (331)
T ss_dssp -------------------EEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEET
T ss_pred -------------------CCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEe
Confidence 14688899856776 3333322 111111112233 345789999998999999998
Q ss_pred CCCC
Q 018474 346 DGPE 349 (355)
Q Consensus 346 ~~~~ 349 (355)
....
T Consensus 303 ~~~~ 306 (331)
T 3u4y_A 303 SGKV 306 (331)
T ss_dssp TSCE
T ss_pred cCCc
Confidence 7643
No 63
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.59 E-value=7.4e-14 Score=125.71 Aligned_cols=180 Identities=9% Similarity=0.080 Sum_probs=130.3
Q ss_pred CCCceEEEeeCCCeEEEEecCCEEEEEEcCCCeeEEeecc-----CCCcccCeEECCCCCEEEEeCC------------C
Q 018474 52 NHPEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHI-----DSQSLLGLTTTKDGGVILCDNE------------K 114 (355)
Q Consensus 52 ~~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~~~~-----~~~p~~gl~~d~~g~L~v~~~~------------~ 114 (355)
..|.+++++ .+|.+|++. +++|+++++++++++.+... ..+++ ++++|++|++|+++.. .
T Consensus 54 ~~~~~i~~~-~dG~l~v~~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~-di~~d~dG~l~~~~~~~~~~~~~~~~~~~ 130 (297)
T 3g4e_A 54 APVSSVALR-QSGGYVATI-GTKFCALNWKEQSAVVLATVDNDKKNNRFN-DGKVDPAGRYFAGTMAEETAPAVLERHQG 130 (297)
T ss_dssp SCEEEEEEB-TTSSEEEEE-TTEEEEEETTTTEEEEEEECCTTCSSEEEE-EEEECTTSCEEEEEEECCSBTTBCCTTCE
T ss_pred CceEEEEEC-CCCCEEEEE-CCeEEEEECCCCcEEEEEecCCCCCCCCCC-CEEECCCCCEEEecCCcccccccccCCCc
Confidence 568899999 566699887 56799999988888766432 23577 8999999999998732 3
Q ss_pred cEEEEcCCC-eEEEcCCcCCcccEEEccCC-cEEEEeCCCCCCCccccccccccCCCCeEEEEe--CCCCeEE---Eee-
Q 018474 115 GLLKVTEEG-VEAIVPDASFTNDVIAASDG-TLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYD--PKLKETT---VLH- 186 (355)
Q Consensus 115 gl~~~~~~g-~~~~~~~~~~~~~l~~d~dG-~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~d--p~~~~~~---~~~- 186 (355)
+++++++++ .+.+......||++++++|| .+|++++. .+.|++|+ +.++++. .+.
T Consensus 131 ~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~~-----------------~~~i~~~~~d~~~G~~~~~~~~~~ 193 (297)
T 3g4e_A 131 ALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSL-----------------SYSVDAFDYDLQTGQISNRRSVYK 193 (297)
T ss_dssp EEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEEEEGG-----------------GTEEEEEEECTTTCCEEEEEEEEE
T ss_pred EEEEEECCCCEEEEeeccccccceEEcCCCCEEEEecCC-----------------CCcEEEEeccCCCCcccCcEEEEE
Confidence 589998767 55554444789999999999 59998764 45677775 4566542 222
Q ss_pred --ccccccccEEEeCCCCEEEEEeCCCCeEEEEEeCCCCCcceeEecccCC-CCcCceEEC-CCC-CEEEEeecC
Q 018474 187 --EGFYFANGIALSKNEDFVVVCESWKFRCRRYWLKGDRAGILDAFIENLP-GGPDNINLA-PDG-SFWIGLIKM 256 (355)
Q Consensus 187 --~~~~~pngi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-g~p~~i~~d-~~G-~lwv~~~~~ 256 (355)
.....|.|++++++|+ +|++....++|.+|+.++.+. .. .+ ..+ ..|.++++. +++ .|||++...
T Consensus 194 ~~~~~~~p~g~~~d~~G~-lwva~~~~~~v~~~d~~tG~~--~~-~i-~~p~~~~t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 194 LEKEEQIPDGMCIDAEGK-LWVACYNGGRVIRLDPVTGKR--LQ-TV-KLPVDKTTSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp CCGGGCEEEEEEEBTTSC-EEEEEETTTEEEEECTTTCCE--EE-EE-ECSSSBEEEEEEESGGGCEEEEEEBCT
T ss_pred CCCCCCCCCeeEECCCCC-EEEEEcCCCEEEEEcCCCceE--EE-EE-ECCCCCceEEEEeCCCCCEEEEEcCCc
Confidence 1235799999999997 999988888999999853221 11 11 223 357888886 555 599998764
No 64
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.59 E-value=3.4e-12 Score=116.44 Aligned_cols=220 Identities=16% Similarity=0.148 Sum_probs=153.7
Q ss_pred CCCceEEEeeCCCeEEEEec-CCEEEEEEcCCCeeEEeeccC--C--------CcccCeEECCCCC-EEEEeC--CCcEE
Q 018474 52 NHPEDVSVVVSKGALYTATR-DGWVKYFILHNETLVNWKHID--S--------QSLLGLTTTKDGG-VILCDN--EKGLL 117 (355)
Q Consensus 52 ~~p~~i~~d~~~g~l~~~~~-~g~i~~~~~~~g~~~~~~~~~--~--------~p~~gl~~d~~g~-L~v~~~--~~gl~ 117 (355)
..|.+++++++++.+|++.. ++.|..+|.++++........ . .|. +++++++|+ +|+++. .+.++
T Consensus 89 ~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~~i~ 167 (353)
T 3vgz_A 89 LKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPR-ELVADDATNTVYISGIGKESVIW 167 (353)
T ss_dssp SCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEE-EEEEETTTTEEEEEEESSSCEEE
T ss_pred CCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCc-eEEECCCCCEEEEEecCCCceEE
Confidence 56999999977777888766 689999999888764433221 1 267 899998886 888873 23488
Q ss_pred EEcC-CC--eEEEcCCcCCcccEEEccCCc-EEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeecc-----
Q 018474 118 KVTE-EG--VEAIVPDASFTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEG----- 188 (355)
Q Consensus 118 ~~~~-~g--~~~~~~~~~~~~~l~~d~dG~-ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~----- 188 (355)
.++. ++ ...+......+++++++++|+ +|+++. .+.++.||+.+++.......
T Consensus 168 ~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~------------------~~~i~~~d~~~~~~~~~~~~~~~~~ 229 (353)
T 3vgz_A 168 VVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNA------------------DGELITIDTADNKILSRKKLLDDGK 229 (353)
T ss_dssp EEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECT------------------TSEEEEEETTTTEEEEEEECCCSSS
T ss_pred EEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcC------------------CCeEEEEECCCCeEEEEEEcCCCCC
Confidence 8884 56 444442335689999999985 777643 35788999988876543321
Q ss_pred ccccccEEEeCCCCEEEEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCC-EEEEeecCCchhhHhhhcc
Q 018474 189 FYFANGIALSKNEDFVVVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGS-FWIGLIKMNQTGVRAIQKC 267 (355)
Q Consensus 189 ~~~pngi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~-lwv~~~~~~~~~~~~~~~~ 267 (355)
...+.+++++||++.+|+++...+.|..|+.+..+. ...+. . +.+.++.++++|+ +|++....
T Consensus 230 ~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~--~~~~~--~-~~~~~~~~s~dg~~l~v~~~~~----------- 293 (353)
T 3vgz_A 230 EHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNI--LAKVA--A-PESLAVLFNPARNEAYVTHRQA----------- 293 (353)
T ss_dssp CCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCE--EEEEE--C-SSCCCEEEETTTTEEEEEETTT-----------
T ss_pred CcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcE--EEEEE--c-CCCceEEECCCCCEEEEEECCC-----------
Confidence 234677999999999999998889999999854322 11121 1 2357789999997 78877431
Q ss_pred hhHHHHHHhccchhhcccCCCCCCceEEEEEeCCCCeEEEEEECCCCCcccceeEEEEe--CCEEEEeecC
Q 018474 268 REKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF--DGNLYLASLQ 336 (355)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~--~g~L~v~~~~ 336 (355)
+.|..+|.++++....+..+. .+..+... +..||+++..
T Consensus 294 -------------------------~~v~~~d~~~~~~~~~~~~~~-----~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 294 -------------------------GKVSVIDAKSYKVVKTFDTPT-----HPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp -------------------------TEEEEEETTTTEEEEEEECCS-----EEEEEEECTTSCEEEEEEEC
T ss_pred -------------------------CeEEEEECCCCeEEEEEecCC-----CCCeEEEcCCCCEEEEEEcc
Confidence 468889986788877776533 34445543 3569998764
No 65
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.57 E-value=3.7e-14 Score=142.41 Aligned_cols=224 Identities=13% Similarity=0.120 Sum_probs=156.5
Q ss_pred CCeEEEEecCCEEEEEEcCCCeeEEeeccCCCcccCeEECC-CCCEEEEeCC-CcEEEEcC-C----C-eEEE-cCCcCC
Q 018474 63 KGALYTATRDGWVKYFILHNETLVNWKHIDSQSLLGLTTTK-DGGVILCDNE-KGLLKVTE-E----G-VEAI-VPDASF 133 (355)
Q Consensus 63 ~g~l~~~~~~g~i~~~~~~~g~~~~~~~~~~~p~~gl~~d~-~g~L~v~~~~-~gl~~~~~-~----g-~~~~-~~~~~~ 133 (355)
...|+++.. +.|++++..+.+...+......|. ++++|+ +++||+++.. +.|++++. . . .+.+ ......
T Consensus 377 ~~~ll~~~~-~~I~~id~~~~~~~~~~~~~~~p~-gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~ 454 (699)
T 1n7d_A 377 IAYLFFTNR-HEVRKMTLDRSEYTSLIPNLRNVV-ALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQA 454 (699)
T ss_dssp CCCBCCCCT-TC-CEECTTSCCEECCSCCCTTCC-CCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--
T ss_pred ceeEEecCc-cceEEEeCCCCcceeeeccCcceE-EEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCC
Confidence 344555443 568889887666665555556799 999996 5789999876 45888874 2 2 2222 223367
Q ss_pred cccEEEcc-CCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEee-ccccccccEEEeCCCCEEEEEeCCC
Q 018474 134 TNDVIAAS-DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH-EGFYFANGIALSKNEDFVVVCESWK 211 (355)
Q Consensus 134 ~~~l~~d~-dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~-~~~~~pngi~~~~dg~~l~v~~~~~ 211 (355)
|.+|++|. .|+||++|.. .++|++++++++..+.+. .++..|++|+++|++..|||++...
T Consensus 455 P~glavD~~~g~LY~tD~~-----------------~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~ 517 (699)
T 1n7d_A 455 PDGLAVDWIHSNIYWTDSV-----------------LGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGT 517 (699)
T ss_dssp CCCEECCCSSSBCEECCTT-----------------TSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSS
T ss_pred cceEEEEeeCCcEEEEecc-----------------CCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCC
Confidence 99999995 6799999865 457999998877666554 4567899999999887899999765
Q ss_pred -CeEEEEEeCCCCCcceeEecccCCCCcCceEECCC-CCEEEEeecCCchhhHhhhcchhHHHHHHhccchhhcccCCCC
Q 018474 212 -FRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPD-GSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGS 289 (355)
Q Consensus 212 -~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~-G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (355)
++|++++++|... +.+....-..|++|++|.+ ++||++....
T Consensus 518 ~~~I~~~~~dG~~~---~~l~~~~l~~PnGlavd~~~~~LY~aD~~~--------------------------------- 561 (699)
T 1n7d_A 518 PAKIKKGGLNGVDI---YSLVTENIQWPNGITLDLLSGRLYWVDSKL--------------------------------- 561 (699)
T ss_dssp SCCEEBCCSSSCCC---CEESCSSCSSCCCEEECTTTCCEEEEETTT---------------------------------
T ss_pred CCeEEEEeCCCCCe---eEEEeCCCCCccEEEEeccCCEEEEEecCC---------------------------------
Confidence 7899998876422 2233222346999999965 6899998542
Q ss_pred CCceEEEEEeCCCCeEEEEEECCCCCcccceeEEEEeCCEEEEeecCCCeEEEeeCC
Q 018474 290 DAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFDGNLYLASLQSNFIGILPLD 346 (355)
Q Consensus 290 ~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~~~i~~~~~~ 346 (355)
..|.+++. +|...+.+....+. ...+.++..++++||++...+++|.+++..
T Consensus 562 ---~~I~~~d~-dG~~~~~~~~~~~~-~~~P~glavd~~~lywtd~~~~~V~~~d~~ 613 (699)
T 1n7d_A 562 ---HSISSIDV-NGGNRKTILEDEKR-LAHPFSLAVFEDKVFWTDIINEAIFSANRL 613 (699)
T ss_dssp ---TEEEEECS-SSSCCEEECCCSSS-CSSCCCCEEETTEEEEECSTTTCEEEEETT
T ss_pred ---CeEEEEcc-CCCceEEEEecCCc-CCCceEeEEECCEEEEEeCCCCeEEEEEcc
Confidence 36899998 77655544332221 334556677788999999999999999753
No 66
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.56 E-value=3.3e-13 Score=122.85 Aligned_cols=181 Identities=14% Similarity=0.165 Sum_probs=127.9
Q ss_pred CCCceEEEeeCCCeEEEEecC-----CEEEEEEcCCCeeEEeec---cCCCcccCeEECCCCCEEEEeCC-------CcE
Q 018474 52 NHPEDVSVVVSKGALYTATRD-----GWVKYFILHNETLVNWKH---IDSQSLLGLTTTKDGGVILCDNE-------KGL 116 (355)
Q Consensus 52 ~~p~~i~~d~~~g~l~~~~~~-----g~i~~~~~~~g~~~~~~~---~~~~p~~gl~~d~~g~L~v~~~~-------~gl 116 (355)
..|.+++++ .+|.+|+++.. ++|+++++++++...+.. ....+. ++++|++|++|+++.. .++
T Consensus 87 ~~~~~i~~~-~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~-~i~~d~~g~l~v~~~~~~~~~~~~~l 164 (333)
T 2dg1_A 87 ANPAAIKIH-KDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCID-DMVFDSKGGFYFTDFRGYSTNPLGGV 164 (333)
T ss_dssp SSEEEEEEC-TTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEE-EEEECTTSCEEEEECCCBTTBCCEEE
T ss_pred CCcceEEEC-CCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCccc-ceEECCCCCEEEEeccccccCCCceE
Confidence 568999999 56788888754 489999997777664432 234688 8999999999999863 469
Q ss_pred EEEcC-CC-eEEEcCCcCCcccEEEccCCc-EEEEeCCCCCCCccccccccccCCCCeEEEEeCCC--CeEEEe-----e
Q 018474 117 LKVTE-EG-VEAIVPDASFTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKL--KETTVL-----H 186 (355)
Q Consensus 117 ~~~~~-~g-~~~~~~~~~~~~~l~~d~dG~-ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~--~~~~~~-----~ 186 (355)
++++. .+ ++.+......+++++++++|+ +|+++.. .+.+++||.++ +....+ .
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~-----------------~~~i~~~d~~~~g~~~~~~~~~~~~ 227 (333)
T 2dg1_A 165 YYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETT-----------------ANRLHRIALEDDGVTIQPFGATIPY 227 (333)
T ss_dssp EEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGG-----------------GTEEEEEEECTTSSSEEEEEEEEEE
T ss_pred EEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCC-----------------CCeEEEEEecCCCcCcccccceEEE
Confidence 99985 44 555443335789999999995 9998643 45788888742 223221 1
Q ss_pred --ccccccccEEEeCCCCEEEEEeCCCCeEEEEEeCCCCCcceeEecccCC--C---CcCceEECCCC-CEEEEeec
Q 018474 187 --EGFYFANGIALSKNEDFVVVCESWKFRCRRYWLKGDRAGILDAFIENLP--G---GPDNINLAPDG-SFWIGLIK 255 (355)
Q Consensus 187 --~~~~~pngi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~--g---~p~~i~~d~~G-~lwv~~~~ 255 (355)
.+...|++++++++|+ +|++....++|.+|+.++.. ...+..... + .|.+++++++| .||+++..
T Consensus 228 ~~~~~~~~~~i~~d~~G~-l~v~~~~~~~v~~~d~~g~~---~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 228 YFTGHEGPDSCCIDSDDN-LYVAMYGQGRVLVFNKRGYP---IGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp ECCSSSEEEEEEEBTTCC-EEEEEETTTEEEEECTTSCE---EEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred ecCCCCCCCceEECCCCC-EEEEEcCCCEEEEECCCCCE---EEEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence 1224689999999998 89988777899999875432 222211110 1 57889998886 69998876
No 67
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.55 E-value=1.9e-11 Score=113.40 Aligned_cols=234 Identities=14% Similarity=0.131 Sum_probs=166.7
Q ss_pred CCCceEEEeeCCCeEEEEe-cCCEEEEEEcCCCeeEEeeccCCCcccCeEECCCCC-EEEEeCC-CcEEEEcC-CC--eE
Q 018474 52 NHPEDVSVVVSKGALYTAT-RDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGG-VILCDNE-KGLLKVTE-EG--VE 125 (355)
Q Consensus 52 ~~p~~i~~d~~~g~l~~~~-~~g~i~~~~~~~g~~~~~~~~~~~p~~gl~~d~~g~-L~v~~~~-~gl~~~~~-~g--~~ 125 (355)
..+.++++.+++..+|++. .++.|..+|..+++..........+. +++++++|+ ||++... +.+..++. ++ ..
T Consensus 32 ~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~-~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~ 110 (391)
T 1l0q_A 32 SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQ-GVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAG 110 (391)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEE-EEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCCCcc-ceEECCCCCEEEEEECCCCEEEEEECCCCeEEE
Confidence 4689999997666776654 68999999998888766555555788 999999987 7777655 45777774 55 33
Q ss_pred EEcCCcCCcccEEEccCCc-EEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeeccccccccEEEeCCCCEE
Q 018474 126 AIVPDASFTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYFANGIALSKNEDFV 204 (355)
Q Consensus 126 ~~~~~~~~~~~l~~d~dG~-ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~~~~pngi~~~~dg~~l 204 (355)
.+... ..+.+++++++|+ +|++... .+.++.||..+++..........+..+++++|++.+
T Consensus 111 ~~~~~-~~~~~~~~s~dg~~l~~~~~~-----------------~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l 172 (391)
T 1l0q_A 111 TVKTG-KSPLGLALSPDGKKLYVTNNG-----------------DKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKV 172 (391)
T ss_dssp EEECS-SSEEEEEECTTSSEEEEEETT-----------------TTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEE
T ss_pred EEeCC-CCcceEEECCCCCEEEEEeCC-----------------CCEEEEEECCCCcEEEEEecCCCcceEEECCCCCEE
Confidence 33322 5688999999995 7777644 568999999888776555555667899999999999
Q ss_pred EEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCC-EEEEeecCCchhhHhhhcchhHHHHHHhccchhhc
Q 018474 205 VVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGS-FWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISL 283 (355)
Q Consensus 205 ~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~-lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (355)
|++....+.|..++++... ..... .....+..+.++++|+ +|++...
T Consensus 173 ~~~~~~~~~v~~~d~~~~~---~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~---------------------------- 220 (391)
T 1l0q_A 173 YVANFDSMSISVIDTVTNS---VIDTV-KVEAAPSGIAVNPEGTKAYVTNVD---------------------------- 220 (391)
T ss_dssp EEEETTTTEEEEEETTTTE---EEEEE-ECSSEEEEEEECTTSSEEEEEEEC----------------------------
T ss_pred EEEeCCCCEEEEEECCCCe---EEEEE-ecCCCccceEECCCCCEEEEEecC----------------------------
Confidence 9998888899999985432 11112 1233467788999996 5666532
Q ss_pred ccCCCCCCceEEEEEeCCCCeEEEEEECCCCCcccceeEEEEe--CCEEEEeecCCCeEEEeeCCC
Q 018474 284 LLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF--DGNLYLASLQSNFIGILPLDG 347 (355)
Q Consensus 284 ~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~--~g~L~v~~~~~~~i~~~~~~~ 347 (355)
...+.|..+|.++++.+..+.... .+..+... +..||++....+.|..+++.+
T Consensus 221 ------~~~~~v~~~d~~~~~~~~~~~~~~-----~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~ 275 (391)
T 1l0q_A 221 ------KYFNTVSMIDTGTNKITARIPVGP-----DPAGIAVTPDGKKVYVALSFXNTVSVIDTAT 275 (391)
T ss_dssp ------SSCCEEEEEETTTTEEEEEEECCS-----SEEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred ------cCCCcEEEEECCCCeEEEEEecCC-----CccEEEEccCCCEEEEEcCCCCEEEEEECCC
Confidence 112468889985777777776533 23444443 457888888788999888764
No 68
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.55 E-value=4.5e-13 Score=120.97 Aligned_cols=180 Identities=11% Similarity=0.099 Sum_probs=126.6
Q ss_pred CCCceEEEeeCCCeEEEEec-CCEEEEEEcCCCeeEEeecc-----CCCcccCeEECCCCCEEEEeC-------------
Q 018474 52 NHPEDVSVVVSKGALYTATR-DGWVKYFILHNETLVNWKHI-----DSQSLLGLTTTKDGGVILCDN------------- 112 (355)
Q Consensus 52 ~~p~~i~~d~~~g~l~~~~~-~g~i~~~~~~~g~~~~~~~~-----~~~p~~gl~~d~~g~L~v~~~------------- 112 (355)
..|.+++++ .+|.+|+++. +++|.++++. |+.+.+... .+.|+ .+++|++|++|+++.
T Consensus 86 ~~~~gl~~d-~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~-~i~~d~dG~l~~td~~~g~~~~~~~~~~ 162 (305)
T 3dr2_A 86 AFTNGNAVD-AQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPN-DLIVARDGAIWFTDPPFGLRKPSQGCPA 162 (305)
T ss_dssp SCEEEEEEC-TTSCEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCC-CEEECTTSCEEEECCSGGGSCGGGSCCC
T ss_pred CccceeeEC-CCCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCC-CEEECCCCCEEEeCcCCCcccccccccc
Confidence 568999999 5777998876 4789999984 776655421 24588 999999999999752
Q ss_pred -----CCcEEEEcC-CC-eEEEcCCcCCcccEEEccCCc-EEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEE-
Q 018474 113 -----EKGLLKVTE-EG-VEAIVPDASFTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETT- 183 (355)
Q Consensus 113 -----~~gl~~~~~-~g-~~~~~~~~~~~~~l~~d~dG~-ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~- 183 (355)
..+|+++++ +| ++.+. ....|+++++++||+ ||+++.... ....+.+++|+.+++.+.
T Consensus 163 ~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~gl~~spdg~~lyv~~~~~~------------~~~~~~i~~~~~~~~~l~~ 229 (305)
T 3dr2_A 163 DPELAHHSVYRLPPDGSPLQRMA-DLDHPNGLAFSPDEQTLYVSQTPEQ------------GHGSVEITAFAWRDGALHD 229 (305)
T ss_dssp CCSSSCEEEEEECSSSCCCEEEE-EESSEEEEEECTTSSEEEEEECCC---------------CCCEEEEEEEETTEEEE
T ss_pred ccccCCCeEEEEcCCCCcEEEEe-cCCCCcceEEcCCCCEEEEEecCCc------------CCCCCEEEEEEecCCCccC
Confidence 246999996 67 66655 557899999999995 999976410 001246888876544321
Q ss_pred --Eeec-cccccccEEEeCCCCEEEEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCC-CEEEEeec
Q 018474 184 --VLHE-GFYFANGIALSKNEDFVVVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDG-SFWIGLIK 255 (355)
Q Consensus 184 --~~~~-~~~~pngi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G-~lwv~~~~ 255 (355)
.+.. ....|+|++++++|+ +|++. .++|++|+.++..... + ..+..+.+++++++| .||+++..
T Consensus 230 ~~~~~~~~~~~pdgi~~d~~G~-lwv~~--~~gv~~~~~~g~~~~~---~--~~~~~~~~~~f~~d~~~L~it~~~ 297 (305)
T 3dr2_A 230 RRHFASVPDGLPDGFCVDRGGW-LWSSS--GTGVCVFDSDGQLLGH---I--PTPGTASNCTFDQAQQRLFITGGP 297 (305)
T ss_dssp EEEEECCSSSCCCSEEECTTSC-EEECC--SSEEEEECTTSCEEEE---E--ECSSCCCEEEECTTSCEEEEEETT
T ss_pred CeEEEECCCCCCCeEEECCCCC-EEEec--CCcEEEECCCCCEEEE---E--ECCCceeEEEEeCCCCEEEEEcCC
Confidence 2221 235689999999998 88876 4689999986543322 2 123347889998776 59998854
No 69
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.55 E-value=3.8e-13 Score=121.96 Aligned_cols=215 Identities=12% Similarity=0.142 Sum_probs=136.1
Q ss_pred ceEEEeeCCCeEEEEecCCEEEEEEcCCCeeE-EeeccCCCcccCeEECCCCCEEEEeCCCcEEEEcCCC-e-EEEcCCc
Q 018474 55 EDVSVVVSKGALYTATRDGWVKYFILHNETLV-NWKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVTEEG-V-EAIVPDA 131 (355)
Q Consensus 55 ~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~-~~~~~~~~p~~gl~~d~~g~L~v~~~~~gl~~~~~~g-~-~~~~~~~ 131 (355)
.+++.+ .++.+|+++.+ |+++|+ +|+.. .+........ ...++ +|+||+++..++++++++.| . .......
T Consensus 63 ~~~~~~-~~g~l~v~t~~--l~~~d~-~g~~~~~~~~~~~~~~-~~~~~-~~~l~v~t~~~~l~~~d~~g~~~~~~~~~~ 136 (330)
T 3hxj_A 63 CRPSIG-KDGTIYFGSDK--VYAINP-DGTEKWRFDTKKAIVS-DFTIF-EDILYVTSMDGHLYAINTDGTEKWRFKTKK 136 (330)
T ss_dssp ECCEET-TTTEECCSSCE--EEEECC-CGGGGGGSCC-----C-CEEEE-TTEEEEECTTSEEEEECTTSCEEEEEECSS
T ss_pred cceEEe-cCCcEEEecCc--EEEECC-CCcEEEEEECCCCccc-CceEE-CCEEEEEecCCEEEEEcCCCCEEEEEcCCC
Confidence 455666 67788887655 888886 55422 1111111122 34444 78899988777888988546 2 2222222
Q ss_pred CCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEE-eeccccccccEEEeCCCCEEEEEeCC
Q 018474 132 SFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTV-LHEGFYFANGIALSKNEDFVVVCESW 210 (355)
Q Consensus 132 ~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~-~~~~~~~pngi~~~~dg~~l~v~~~~ 210 (355)
.....++++++|++|++.. .++++++|++ ++... ..........+++++++. +|++.
T Consensus 137 ~~~~~~~~~~~g~l~vgt~------------------~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~-l~v~t-- 194 (330)
T 3hxj_A 137 AIYATPIVSEDGTIYVGSN------------------DNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGT-IYFGS-- 194 (330)
T ss_dssp CCCSCCEECTTSCEEEECT------------------TSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCC-EEEES--
T ss_pred ceeeeeEEcCCCEEEEEcC------------------CCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCE-EEEEe--
Confidence 4566778888889998743 3589999998 55432 222223345677878887 88775
Q ss_pred CCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCCEEEEeecCCchhhHhhhcchhHHHHHHhccchhhcccCCCCC
Q 018474 211 KFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSD 290 (355)
Q Consensus 211 ~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (355)
++|++++.++... .+ +. ........+..|++|++|+++..
T Consensus 195 -~~l~~~d~~g~~~--~~-~~-~~~~~~~~~~~~~~g~l~v~t~~----------------------------------- 234 (330)
T 3hxj_A 195 -DKVYAINPDGTEK--WN-FY-AGYWTVTRPAISEDGTIYVTSLD----------------------------------- 234 (330)
T ss_dssp -SSEEEECTTSCEE--EE-EC-CSSCCCSCCEECTTSCEEEEETT-----------------------------------
T ss_pred -CEEEEECCCCcEE--EE-Ec-cCCcceeceEECCCCeEEEEcCC-----------------------------------
Confidence 7899998433211 11 11 11123566889999999999864
Q ss_pred CceEEEEEeCCCCeEEEEEECCCCCcccceeEEEEe-CCEEEEeecCCCeEEEeeC
Q 018474 291 AGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF-DGNLYLASLQSNFIGILPL 345 (355)
Q Consensus 291 ~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-~g~L~v~~~~~~~i~~~~~ 345 (355)
++++++++ +|+.+..+....+. ...++.+ +|+||+++. .+.|.+++.
T Consensus 235 --~gl~~~~~-~g~~~~~~~~~~~~----~~~~~~~~~g~l~v~t~-~ggl~~~d~ 282 (330)
T 3hxj_A 235 --GHLYAINP-DGTEKWRFKTGKRI----ESSPVIGNTDTIYFGSY-DGHLYAINP 282 (330)
T ss_dssp --TEEEEECT-TSCEEEEEECSSCC----CSCCEECTTSCEEEECT-TCEEEEECT
T ss_pred --CeEEEECC-CCCEeEEeeCCCCc----cccceEcCCCeEEEecC-CCCEEEECC
Confidence 47999998 99888777664432 2223444 799999997 557888874
No 70
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.54 E-value=6.1e-12 Score=115.10 Aligned_cols=188 Identities=15% Similarity=0.124 Sum_probs=124.2
Q ss_pred CCCCceEEEeeCCCeEEEEe-cCCEEEEEEcC-CCeeEEeec---cC---------CCcccCeEECCCCCEEEEeCCCc-
Q 018474 51 VNHPEDVSVVVSKGALYTAT-RDGWVKYFILH-NETLVNWKH---ID---------SQSLLGLTTTKDGGVILCDNEKG- 115 (355)
Q Consensus 51 ~~~p~~i~~d~~~g~l~~~~-~~g~i~~~~~~-~g~~~~~~~---~~---------~~p~~gl~~d~~g~L~v~~~~~g- 115 (355)
...|.++++++++..||++. .++.+..++.. +|+...... .+ ..+. +++++++|++|+++...+
T Consensus 85 ~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~-~~~~spdg~l~v~~~~~~~ 163 (347)
T 3hfq_A 85 GTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIH-YTDLTPDNRLAVIDLGSDK 163 (347)
T ss_dssp SCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEE-EEEECTTSCEEEEETTTTE
T ss_pred CCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCce-EEEECCCCcEEEEeCCCCE
Confidence 46899999997777799888 46888888873 555443321 11 1366 799999999999887654
Q ss_pred EEEEc-C-CC-eEEEc---C-CcCCcccEEEccCCc-EEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeec
Q 018474 116 LLKVT-E-EG-VEAIV---P-DASFTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHE 187 (355)
Q Consensus 116 l~~~~-~-~g-~~~~~---~-~~~~~~~l~~d~dG~-ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~ 187 (355)
+..++ . +| +.... . ....|+++++++||+ +|+++... ....++.++..+++++....
T Consensus 164 v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~---------------~~v~v~~~~~~~g~~~~~~~ 228 (347)
T 3hfq_A 164 VYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELS---------------SQIASLKYDTQTGAFTQLGI 228 (347)
T ss_dssp EEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTT---------------TEEEEEEEETTTTEEEEEEE
T ss_pred EEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCC---------------CEEEEEEecCCCCceEEeee
Confidence 65565 3 56 44322 1 125788999999996 88876541 11235555655676544321
Q ss_pred c---------ccccccEEEeCCCCEEEEEeCCCCeEEEEEeCCC-CCcceeEecccCCCCcCceEECCCCC-EEEEeec
Q 018474 188 G---------FYFANGIALSKNEDFVVVCESWKFRCRRYWLKGD-RAGILDAFIENLPGGPDNINLAPDGS-FWIGLIK 255 (355)
Q Consensus 188 ~---------~~~pngi~~~~dg~~l~v~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~g~p~~i~~d~~G~-lwv~~~~ 255 (355)
. ...|.+++++|||+.+|+++...+.|..|+++.. .......+ ......|.+++++++|+ +|++...
T Consensus 229 ~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~-~~~~~~~~~~~~spdg~~l~v~~~~ 306 (347)
T 3hfq_A 229 VKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQI-STEGDFPRDFDLDPTEAFVVVVNQN 306 (347)
T ss_dssp EESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEE-ECSSSCCCEEEECTTSSEEEEEETT
T ss_pred eeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEE-ecCCCCcCeEEECCCCCEEEEEEcC
Confidence 1 1346779999999999999988899999998532 11111111 12233589999999997 6666543
No 71
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.52 E-value=1e-11 Score=112.53 Aligned_cols=229 Identities=13% Similarity=0.110 Sum_probs=154.9
Q ss_pred CCCeEEEEec-CCEEEEEEcCCCeeEEeeccCCCcccCeEECCCCC-EEEEeCC-CcEEEEcC-CC-e-EEEcCCcCCcc
Q 018474 62 SKGALYTATR-DGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGG-VILCDNE-KGLLKVTE-EG-V-EAIVPDASFTN 135 (355)
Q Consensus 62 ~~g~l~~~~~-~g~i~~~~~~~g~~~~~~~~~~~p~~gl~~d~~g~-L~v~~~~-~gl~~~~~-~g-~-~~~~~~~~~~~ 135 (355)
.++.+|+... ++.|..+|..+++.......+..+. +++++++|+ ||++... +.++.++. ++ + .........+.
T Consensus 8 ~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~ 86 (331)
T 3u4y_A 8 TSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSM 86 (331)
T ss_dssp CCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCC
T ss_pred CCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCc
Confidence 5677787654 7899999998888765544445555 899999997 8888764 45888884 55 4 33222225677
Q ss_pred c-EEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeeccccccccEEEeCCCCEEEEEeCCCCe-
Q 018474 136 D-VIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYFANGIALSKNEDFVVVCESWKFR- 213 (355)
Q Consensus 136 ~-l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~~~~pngi~~~~dg~~l~v~~~~~~~- 213 (355)
. ++++++|+..++... ....+.+..||.++++..........|++++++|||+.+|+++...+.
T Consensus 87 ~~~~~s~dg~~l~~~~~--------------~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~ 152 (331)
T 3u4y_A 87 ADVDITPDDQFAVTVTG--------------LNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANT 152 (331)
T ss_dssp CCEEECTTSSEEEECCC--------------SSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTE
T ss_pred cceEECCCCCEEEEecC--------------CCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCce
Confidence 7 999999964444322 001227999999888776555555668999999999989999887677
Q ss_pred EEEEEeCCCC-Ccce-eEecccCCCCcCceEECCCCC-EEEEeecCCchhhHhhhcchhHHHHHHhccchhhcccCCCCC
Q 018474 214 CRRYWLKGDR-AGIL-DAFIENLPGGPDNINLAPDGS-FWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSD 290 (355)
Q Consensus 214 i~~~~~~~~~-~~~~-~~~~~~~~g~p~~i~~d~~G~-lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (355)
|..|+++... .... .... .....|.++.++++|+ +|++....
T Consensus 153 i~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~spdg~~l~v~~~~~---------------------------------- 197 (331)
T 3u4y_A 153 VRRFKIDADGVLFDTGQEFI-SGGTRPFNITFTPDGNFAFVANLIG---------------------------------- 197 (331)
T ss_dssp EEEEEECTTCCEEEEEEEEE-CSSSSEEEEEECTTSSEEEEEETTT----------------------------------
T ss_pred EEEEEECCCCcEeecCCccc-cCCCCccceEECCCCCEEEEEeCCC----------------------------------
Confidence 9988886421 1111 1111 2223578899999997 78876431
Q ss_pred CceEEEEEeCCCCeE---EEEEECCCCCcccceeEEEEe--CCEEEEeecCCCeEEEeeCCC
Q 018474 291 AGARVVKVDGNDGKI---IRDFNDPDATYISFVTSAAEF--DGNLYLASLQSNFIGILPLDG 347 (355)
Q Consensus 291 ~~~~v~~~~~~~g~~---~~~~~~~~g~~~~~~~~~~~~--~g~L~v~~~~~~~i~~~~~~~ 347 (355)
+.|..+|.++++. +..+.... .+..+... +..||+++...+.|.++++.+
T Consensus 198 --~~v~v~d~~~~~~~~~~~~~~~~~-----~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~ 252 (331)
T 3u4y_A 198 --NSIGILETQNPENITLLNAVGTNN-----LPGTIVVSRDGSTVYVLTESTVDVFNFNQLS 252 (331)
T ss_dssp --TEEEEEECSSTTSCEEEEEEECSS-----CCCCEEECTTSSEEEEECSSEEEEEEEETTT
T ss_pred --CeEEEEECCCCcccceeeeccCCC-----CCceEEECCCCCEEEEEEcCCCEEEEEECCC
Confidence 3588888756776 56665422 23334443 456999888888898888765
No 72
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.51 E-value=1.7e-12 Score=123.19 Aligned_cols=201 Identities=10% Similarity=0.034 Sum_probs=135.8
Q ss_pred CcccCeEECCC---CCEEEEeCCCcEEEEcC-CC-eEEEcCCcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCC
Q 018474 94 QSLLGLTTTKD---GGVILCDNEKGLLKVTE-EG-VEAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKP 168 (355)
Q Consensus 94 ~p~~gl~~d~~---g~L~v~~~~~gl~~~~~-~g-~~~~~~~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~ 168 (355)
.|. ++++|++ |+||+++..+.|.+++. ++ ++.+......|+++++|++|+||+++.... ..
T Consensus 140 ~P~-gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~lyVad~~~~-------------~~ 205 (433)
T 4hw6_A 140 NIW-RMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGDMVVVDDQSS-------------DT 205 (433)
T ss_dssp CCC-EEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECCCCSCEEEEEECTTCCEEEEECCSC-------------TT
T ss_pred CCc-eEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeecCCCCccEEEECCCCCEEEEcCCCC-------------cc
Confidence 588 9999974 89999997667999995 77 777766667899999999999999987421 01
Q ss_pred CCeEEEEeCCCCeE-EEeeccccccccEEEeCCCCEEEEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCC
Q 018474 169 YGQLRKYDPKLKET-TVLHEGFYFANGIALSKNEDFVVVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDG 247 (355)
Q Consensus 169 ~g~l~~~dp~~~~~-~~~~~~~~~pngi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G 247 (355)
..+++.+++..+.. ......+..|+++++++++..||+++...++|++++.++..... ..+.......+.++++|++|
T Consensus 206 ~~gv~~~~~~~~~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~-~~~~~~~~~~~~~ia~dpdG 284 (433)
T 4hw6_A 206 NTGIYLFTRASGFTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTE-EEVMMDTKGSNFHIVWHPTG 284 (433)
T ss_dssp SEEEEEECGGGTTCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEE-EEEECSCCSSCEEEEECTTS
T ss_pred cceEEEEECCCCeeccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEE-EEeccCCCCCcccEEEeCCC
Confidence 12466666543321 11222467899999999444599999999999999986322201 11211222345679999999
Q ss_pred C-EEEEeecCCchhhHhhhcchhHHHHHHhccchhhcccCCCCCCceEEEEEeCCC---CeE--EEEEECC---CC----
Q 018474 248 S-FWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGND---GKI--IRDFNDP---DA---- 314 (355)
Q Consensus 248 ~-lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---g~~--~~~~~~~---~g---- 314 (355)
+ +||+.... ..|.+++. + ++. ...+... .|
T Consensus 285 ~~LYvad~~~------------------------------------~~I~~~~~-d~~~~~~~~~~~~ag~~g~~g~~dg 327 (433)
T 4hw6_A 285 DWAYIIYNGK------------------------------------HCIYRVDY-NRETGKLAVPYIVCGQHSSPGWVDG 327 (433)
T ss_dssp SEEEEEETTT------------------------------------TEEEEEEB-CTTTCCBCCCEEEEECTTCCCCBCE
T ss_pred CEEEEEeCCC------------------------------------CEEEEEeC-CCCCcccCcEEEEEecCCCCccCCC
Confidence 8 99998652 36888765 3 321 1122211 11
Q ss_pred ----CcccceeEEEE----------eCCEEEEeecCCCeEEEeeCC
Q 018474 315 ----TYISFVTSAAE----------FDGNLYLASLQSNFIGILPLD 346 (355)
Q Consensus 315 ----~~~~~~~~~~~----------~~g~L~v~~~~~~~i~~~~~~ 346 (355)
..+..+..++. .+|+||+++..+.+|.++...
T Consensus 328 ~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~~ 373 (433)
T 4hw6_A 328 MGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTPE 373 (433)
T ss_dssp EGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECTT
T ss_pred cccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECCC
Confidence 12445666766 358999999999999999754
No 73
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.50 E-value=1.9e-11 Score=108.97 Aligned_cols=214 Identities=15% Similarity=0.142 Sum_probs=149.1
Q ss_pred CCCeEEEEecCCEEEEEEcCCCeeEEeeccC--CCcccCeEECCCCCEEEEeCCCcEEEEcCCC--eEEEcCCc-CCccc
Q 018474 62 SKGALYTATRDGWVKYFILHNETLVNWKHID--SQSLLGLTTTKDGGVILCDNEKGLLKVTEEG--VEAIVPDA-SFTND 136 (355)
Q Consensus 62 ~~g~l~~~~~~g~i~~~~~~~g~~~~~~~~~--~~p~~gl~~d~~g~L~v~~~~~gl~~~~~~g--~~~~~~~~-~~~~~ 136 (355)
+++.++++..++.|+.+|+++|+...-.... ..++ +++++++|+++++ ..++++.++++| +-.+.... ..+++
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~-~~~~~pdG~ilvs-~~~~V~~~d~~G~~~W~~~~~~~~~~~~ 81 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECN-SVAATKAGEILFS-YSKGAKMITRDGRELWNIAAPAGCEMQT 81 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCC-EEEECTTSCEEEE-CBSEEEEECTTSCEEEEEECCTTCEEEE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCc-CeEECCCCCEEEe-CCCCEEEECCCCCEEEEEcCCCCccccc
Confidence 3556677777999999999899865322222 2577 8899999999994 466899999877 44443321 35667
Q ss_pred EEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEee--c----cccccccEEEeCCCCEEEEEeCC
Q 018474 137 VIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH--E----GFYFANGIALSKNEDFVVVCESW 210 (355)
Q Consensus 137 l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~--~----~~~~pngi~~~~dg~~l~v~~~~ 210 (355)
+.+.++|++++++.. ..++++.+|++++.+..+. . ....+.+++..++|+ ++++...
T Consensus 82 ~~~~~dG~~lv~~~~----------------~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~-~lv~~~~ 144 (276)
T 3no2_A 82 ARILPDGNALVAWCG----------------HPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGN-YLVPLFA 144 (276)
T ss_dssp EEECTTSCEEEEEES----------------TTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSC-EEEEETT
T ss_pred cEECCCCCEEEEecC----------------CCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCC-EEEEecC
Confidence 888999999998643 0347888888554433332 1 123467889999998 6677778
Q ss_pred CCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCCEEEEeecCCchhhHhhhcchhHHHHHHhccchhhcccCCCCC
Q 018474 211 KFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSD 290 (355)
Q Consensus 211 ~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (355)
.++|..++.+|+...++ ..++.|.+...+.+|+++|+....
T Consensus 145 ~~~v~~~d~~G~~~w~~-----~~~~~~~~~~~~~~g~~~v~~~~~---------------------------------- 185 (276)
T 3no2_A 145 TSEVREIAPNGQLLNSV-----KLSGTPFSSAFLDNGDCLVACGDA---------------------------------- 185 (276)
T ss_dssp TTEEEEECTTSCEEEEE-----ECSSCCCEEEECTTSCEEEECBTT----------------------------------
T ss_pred CCEEEEECCCCCEEEEE-----ECCCCccceeEcCCCCEEEEeCCC----------------------------------
Confidence 89999999875433222 123457778888999999987552
Q ss_pred CceEEEEEeCCCCeEEEEEECC--CCCcccceeEEEE-eCCEEEEeec
Q 018474 291 AGARVVKVDGNDGKIIRDFNDP--DATYISFVTSAAE-FDGNLYLASL 335 (355)
Q Consensus 291 ~~~~v~~~~~~~g~~~~~~~~~--~g~~~~~~~~~~~-~~g~L~v~~~ 335 (355)
+.|+.||+++|+.+-.+... .+.....++++.. .+|++|++++
T Consensus 186 --~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 186 --HCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp --SEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred --CeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 46999999559998888643 2322445666655 4699999986
No 74
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.49 E-value=2.3e-11 Score=112.46 Aligned_cols=258 Identities=11% Similarity=0.071 Sum_probs=154.2
Q ss_pred CccCceEecCCCCCCCceEEEeeCCCeEEEEecCCEEEEEEcC-CCeeEEeec--cCCCcccCeEECCCCC-EEE--Ee-
Q 018474 39 SMKGLTKLGEGCVNHPEDVSVVVSKGALYTATRDGWVKYFILH-NETLVNWKH--IDSQSLLGLTTTKDGG-VIL--CD- 111 (355)
Q Consensus 39 ~l~~~~~~~~~~~~~p~~i~~d~~~g~l~~~~~~g~i~~~~~~-~g~~~~~~~--~~~~p~~gl~~d~~g~-L~v--~~- 111 (355)
+|+.......+....|.++++++++..||+++.+ .|..++.. +|+...... ..+.|. +++++++|+ ||+ ++
T Consensus 27 ~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~-~~~~spdg~~l~~~~~~~ 104 (365)
T 1jof_A 27 TCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPR-ANDADTNTRAIFLLAAKQ 104 (365)
T ss_dssp EEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGG-GGCTTSCCEEEEEEECSS
T ss_pred CEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCc-cEEECCCCCEEEEEEecC
Confidence 3433333332334679999999777779988877 78888875 777654322 224588 899999998 343 32
Q ss_pred ------------CCCcE--EEEcCCC-e-EEEcC----CcCCcccEEEccCCc-EEEEeCCCCCCCccccccccccCCCC
Q 018474 112 ------------NEKGL--LKVTEEG-V-EAIVP----DASFTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEGKPYG 170 (355)
Q Consensus 112 ------------~~~gl--~~~~~~g-~-~~~~~----~~~~~~~l~~d~dG~-ly~~d~~~~~~~~~~~~~~~~~~~~g 170 (355)
..+.+ +.++.+| + +.+.. ....+++++++|||+ +|+++.. .+
T Consensus 105 ~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~-----------------~~ 167 (365)
T 1jof_A 105 PPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLT-----------------AN 167 (365)
T ss_dssp TTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETT-----------------TT
T ss_pred CcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCC-----------------CC
Confidence 22223 3333355 3 22221 226799999999995 7777654 34
Q ss_pred eEEEEeCC-CCeEEEee--c---cccccccEEEeCCCCEEEEEeCCCCeEEEEEeCC--CCCcc-eeEecccCC----C-
Q 018474 171 QLRKYDPK-LKETTVLH--E---GFYFANGIALSKNEDFVVVCESWKFRCRRYWLKG--DRAGI-LDAFIENLP----G- 236 (355)
Q Consensus 171 ~l~~~dp~-~~~~~~~~--~---~~~~pngi~~~~dg~~l~v~~~~~~~i~~~~~~~--~~~~~-~~~~~~~~~----g- 236 (355)
.++.|+.+ +++.+... . ....|.+++++|||+.+|++....+.|..|+++. .+... .+.+. .++ +
T Consensus 168 ~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~-~~~~~~~g~ 246 (365)
T 1jof_A 168 KLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFP-LIPPGIPDR 246 (365)
T ss_dssp EEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEE-SSCTTCCCB
T ss_pred EEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEE-cCCCCcCCc
Confidence 67777766 67654331 1 1356889999999999999988778888887752 11110 11111 111 1
Q ss_pred --------CcCceE-ECCCCC-EEEEeecCCchhhHhhhcchhHHHHHHhccchhhcccCCCCCCceEEEEEeCCCCeEE
Q 018474 237 --------GPDNIN-LAPDGS-FWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKII 306 (355)
Q Consensus 237 --------~p~~i~-~d~~G~-lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~ 306 (355)
.|.+++ +++||+ +|++....... ....-.++.+++ +|+..
T Consensus 247 ~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~-----------------------------~~~~i~v~~~~~-~g~~~ 296 (365)
T 1jof_A 247 DPETGKGLYRADVCALTFSGKYMFASSRANKFE-----------------------------LQGYIAGFKLRD-CGSIE 296 (365)
T ss_dssp CTTTSSBSEEEEEEEECTTSSEEEEEEEESSTT-----------------------------SCCEEEEEEECT-TSCEE
T ss_pred ccccccccccccEEEECCCCCEEEEECCCCCCC-----------------------------CCCeEEEEEECC-CCCEE
Confidence 366788 999997 56665431100 000113555555 77754
Q ss_pred EE---EECCCCCcccceeEEEE---eCCEEEEeecCCCeEEEeeCCCC
Q 018474 307 RD---FNDPDATYISFVTSAAE---FDGNLYLASLQSNFIGILPLDGP 348 (355)
Q Consensus 307 ~~---~~~~~g~~~~~~~~~~~---~~g~L~v~~~~~~~i~~~~~~~~ 348 (355)
.. ....... . ....+.. +++.||+++..++.|.+++++..
T Consensus 297 ~~~~~~~~~~~~-~-~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 297 KQLFLSPTPTSG-G-HSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp EEEEEEECSSCC-T-TCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred EeeeeeecCCCC-c-ccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 32 2222111 1 1112345 56889999988888988877654
No 75
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.48 E-value=2.2e-12 Score=117.74 Aligned_cols=178 Identities=15% Similarity=0.127 Sum_probs=127.1
Q ss_pred CCCceEEEeeCCCeEEEEecCCEEEEEEcCCCeeEEeeccC-----CCcccCeEECCCCCEEEEeCC-------CcEEEE
Q 018474 52 NHPEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHID-----SQSLLGLTTTKDGGVILCDNE-------KGLLKV 119 (355)
Q Consensus 52 ~~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~~~~~-----~~p~~gl~~d~~g~L~v~~~~-------~gl~~~ 119 (355)
..+.+++++ .+|.+|+++. .+|+++++.+++.+.+.... ..+. .+++|++|++|+++.. .+|+++
T Consensus 90 ~~v~~i~~~-~dg~l~v~~~-~gl~~~d~~~g~~~~~~~~~~~~~~~~~~-~i~~d~~G~l~v~~~~~~~~~~~~~l~~~ 166 (326)
T 2ghs_A 90 FMGSALAKI-SDSKQLIASD-DGLFLRDTATGVLTLHAELESDLPGNRSN-DGRMHPSGALWIGTMGRKAETGAGSIYHV 166 (326)
T ss_dssp SCEEEEEEE-ETTEEEEEET-TEEEEEETTTCCEEEEECSSTTCTTEEEE-EEEECTTSCEEEEEEETTCCTTCEEEEEE
T ss_pred CcceEEEEe-CCCeEEEEEC-CCEEEEECCCCcEEEEeeCCCCCCCCCCC-CEEECCCCCEEEEeCCCcCCCCceEEEEE
Confidence 467889999 5778998875 45999999888877664321 2477 8999999999998752 469999
Q ss_pred cCCC-eEEEcCCcCCcccEEEccCC-cEEEEeCCCCCCCccccccccccCCCCeEEEEeCC--CC-eE---EEee---cc
Q 018474 120 TEEG-VEAIVPDASFTNDVIAASDG-TLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPK--LK-ET---TVLH---EG 188 (355)
Q Consensus 120 ~~~g-~~~~~~~~~~~~~l~~d~dG-~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~--~~-~~---~~~~---~~ 188 (355)
+ +| ++.+......++++++++|| .+|+++.. .+.|++||.+ ++ ++ +.+. ..
T Consensus 167 ~-~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~-----------------~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~ 228 (326)
T 2ghs_A 167 A-KGKVTKLFADISIPNSICFSPDGTTGYFVDTK-----------------VNRLMRVPLDARTGLPTGKAEVFIDSTGI 228 (326)
T ss_dssp E-TTEEEEEEEEESSEEEEEECTTSCEEEEEETT-----------------TCEEEEEEBCTTTCCBSSCCEEEEECTTS
T ss_pred e-CCcEEEeeCCCcccCCeEEcCCCCEEEEEECC-----------------CCEEEEEEcccccCCcccCceEEEECCCC
Confidence 8 67 65554433678999999999 58998754 4578888864 55 32 1221 12
Q ss_pred ccccccEEEeCCCCEEEEEeCCCCeEEEEEeCCCCCcceeEecccCC-CCcCceEEC-CCC-CEEEEeecC
Q 018474 189 FYFANGIALSKNEDFVVVCESWKFRCRRYWLKGDRAGILDAFIENLP-GGPDNINLA-PDG-SFWIGLIKM 256 (355)
Q Consensus 189 ~~~pngi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-g~p~~i~~d-~~G-~lwv~~~~~ 256 (355)
...|++++++++|+ +|++....++|.+|+.++... +.+ ..+ ..|.+++++ +++ .+||++...
T Consensus 229 ~~~p~gi~~d~~G~-lwva~~~~~~v~~~d~~g~~~---~~i--~~~~~~~~~~af~g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 229 KGGMDGSVCDAEGH-IWNARWGEGAVDRYDTDGNHI---ARY--EVPGKQTTCPAFIGPDASRLLVTSARE 293 (326)
T ss_dssp SSEEEEEEECTTSC-EEEEEETTTEEEEECTTCCEE---EEE--ECSCSBEEEEEEESTTSCEEEEEEBCT
T ss_pred CCCCCeeEECCCCC-EEEEEeCCCEEEEECCCCCEE---EEE--ECCCCCcEEEEEecCCCCEEEEEecCC
Confidence 35689999999997 899887778999998754322 222 122 246778887 665 589988764
No 76
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.48 E-value=3e-11 Score=111.13 Aligned_cols=242 Identities=15% Similarity=0.136 Sum_probs=148.6
Q ss_pred CCCCceEEEeeCCCeEEEEecC----CEE--EEEEcCCCeeEEeec---cCCCcccCeEECCCCCEEEEeCCCc-EEEEc
Q 018474 51 VNHPEDVSVVVSKGALYTATRD----GWV--KYFILHNETLVNWKH---IDSQSLLGLTTTKDGGVILCDNEKG-LLKVT 120 (355)
Q Consensus 51 ~~~p~~i~~d~~~g~l~~~~~~----g~i--~~~~~~~g~~~~~~~---~~~~p~~gl~~d~~g~L~v~~~~~g-l~~~~ 120 (355)
...|.++++++++..||+++.+ +.| +.++..+|+.+.+.. .+..|. .+++ ....||++....+ +..++
T Consensus 49 ~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~-~~~~-dg~~l~~~~~~~~~v~~~~ 126 (361)
T 3scy_A 49 VANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPC-YLTT-NGKNIVTANYSGGSITVFP 126 (361)
T ss_dssp CSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEE-EEEE-CSSEEEEEETTTTEEEEEE
T ss_pred CCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcE-EEEE-CCCEEEEEECCCCEEEEEE
Confidence 5789999999777789998774 667 455665577665432 345677 8888 3345888876554 55555
Q ss_pred --CCC-eEEE----cCC----------cCCcccEEEccCCc-EEEEeCCCCCCCccccccccccCCCCeE--EEEeCCCC
Q 018474 121 --EEG-VEAI----VPD----------ASFTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQL--RKYDPKLK 180 (355)
Q Consensus 121 --~~g-~~~~----~~~----------~~~~~~l~~d~dG~-ly~~d~~~~~~~~~~~~~~~~~~~~g~l--~~~dp~~~ 180 (355)
.++ +..+ ... ...+++++++|||+ +|+++.. .+.+ |.++..++
T Consensus 127 ~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~-----------------~~~v~v~~~~~~~~ 189 (361)
T 3scy_A 127 IGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLG-----------------TDQIHKFNINPNAN 189 (361)
T ss_dssp BCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETT-----------------TTEEEEEEECTTCC
T ss_pred eCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCC-----------------CCEEEEEEEcCCCC
Confidence 244 3211 110 03457799999996 8888754 2344 44455443
Q ss_pred ----e-EE-------EeeccccccccEEEeCCCCEEEEEeCCCCeEEEEEeCCCCCcceeEecccCC---CCcCceEECC
Q 018474 181 ----E-TT-------VLHEGFYFANGIALSKNEDFVVVCESWKFRCRRYWLKGDRAGILDAFIENLP---GGPDNINLAP 245 (355)
Q Consensus 181 ----~-~~-------~~~~~~~~pngi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~---g~p~~i~~d~ 245 (355)
+ +. ........|.+++++|||+.+|+++...+.|..|++++........+. ..+ ..|.++++++
T Consensus 190 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~-~~~~~~~~~~~i~~sp 268 (361)
T 3scy_A 190 ADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVA-ADTVNAQGSGDIHLSP 268 (361)
T ss_dssp TTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEE-SCSSCCCCEEEEEECT
T ss_pred cccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEe-cCCCCCCCcccEEECC
Confidence 2 21 112334568899999999999999988889999998643222222221 111 1255889999
Q ss_pred CCC-EEEEeecCCchhhHhhhcchhHHHHHHhccchhhcccCCCCCCceEEEEEeCCCCeEE--EEEECCCCCcccceeE
Q 018474 246 DGS-FWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKII--RDFNDPDATYISFVTS 322 (355)
Q Consensus 246 ~G~-lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~--~~~~~~~g~~~~~~~~ 322 (355)
+|+ +|++..... ..-.++.+++++|+.. ..+.. |. .+..
T Consensus 269 dg~~l~v~~~~~~---------------------------------~~i~v~~~~~~~g~~~~~~~~~~--g~---~~~~ 310 (361)
T 3scy_A 269 DGKYLYASNRLKA---------------------------------DGVAIFKVDETNGTLTKVGYQLT--GI---HPRN 310 (361)
T ss_dssp TSSEEEEEECSSS---------------------------------CEEEEEEECTTTCCEEEEEEEEC--SS---CCCE
T ss_pred CCCEEEEECCCCC---------------------------------CEEEEEEEcCCCCcEEEeeEecC--CC---CCce
Confidence 998 555553201 1124666675356633 33333 32 3344
Q ss_pred EEEe--CCEEEEeecCCCeEEEeeCCCCCC
Q 018474 323 AAEF--DGNLYLASLQSNFIGILPLDGPEP 350 (355)
Q Consensus 323 ~~~~--~g~L~v~~~~~~~i~~~~~~~~~~ 350 (355)
+... +..||+++..++.|.+++++...-
T Consensus 311 ~~~spdg~~l~~~~~~~~~v~v~~~d~~~g 340 (361)
T 3scy_A 311 FIITPNGKYLLVACRDTNVIQIFERDQATG 340 (361)
T ss_dssp EEECTTSCEEEEEETTTTEEEEEEECTTTC
T ss_pred EEECCCCCEEEEEECCCCCEEEEEEECCCC
Confidence 5544 467999998899999987765443
No 77
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=99.47 E-value=4.8e-11 Score=109.05 Aligned_cols=207 Identities=16% Similarity=0.243 Sum_probs=133.2
Q ss_pred CccCceEecCCCCCCCceEEEeeCCCeEEEEec-CCEEEEEEcCCCeeEEeec-------cCCCcccCeEECC----CCC
Q 018474 39 SMKGLTKLGEGCVNHPEDVSVVVSKGALYTATR-DGWVKYFILHNETLVNWKH-------IDSQSLLGLTTTK----DGG 106 (355)
Q Consensus 39 ~l~~~~~~~~~~~~~p~~i~~d~~~g~l~~~~~-~g~i~~~~~~~g~~~~~~~-------~~~~p~~gl~~d~----~g~ 106 (355)
.....+.+.++ +..|.+|++. .+|.+|++.. .|+|+++++.+++...+.. ..+.+. ||++++ +|.
T Consensus 20 ~~~~~~~va~g-L~~P~~ia~~-pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~Gll-Gia~~Pdf~~~g~ 96 (347)
T 3das_A 20 SVKVLRTVATG-LNSPWGLAPL-PGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLL-GIALSPDYASDHM 96 (347)
T ss_dssp CEEEEEEEECC-CSSEEEEEEC-TTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEE-EEEECTTHHHHCE
T ss_pred CCceeEEeecC-CCCceEEEEc-CCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCce-eeEeccccccCCE
Confidence 33455677776 8999999999 5778999988 8999999986676554421 234578 999997 488
Q ss_pred EEEEeC---CCcEEEEc-CC-----C----eEEE----cCC-cCCcccEEEccCCcEEEEeCCCCCCCccccccccccCC
Q 018474 107 VILCDN---EKGLLKVT-EE-----G----VEAI----VPD-ASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKP 168 (355)
Q Consensus 107 L~v~~~---~~gl~~~~-~~-----g----~~~~----~~~-~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~ 168 (355)
||++.. ...|+++. .. . .+.+ ... ..+.+.|++++||.|||+..... .. ..... ....
T Consensus 97 lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~-~~-~~~qd--~~~~ 172 (347)
T 3das_A 97 VYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESG-DT-GLSQD--RKSL 172 (347)
T ss_dssp EEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTT-CG-GGTTC--TTCS
T ss_pred EEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCC-CC-ccccC--CCCC
Confidence 999632 34688885 22 1 2222 111 15677899999999999864311 00 00000 0123
Q ss_pred CCeEEEEeCCCC--------eEEEeeccccccccEEEeCCCCEEEEEeCCCC---eEEEEEeCCCCCccee---------
Q 018474 169 YGQLRKYDPKLK--------ETTVLHEGFYFANGIALSKNEDFVVVCESWKF---RCRRYWLKGDRAGILD--------- 228 (355)
Q Consensus 169 ~g~l~~~dp~~~--------~~~~~~~~~~~pngi~~~~dg~~l~v~~~~~~---~i~~~~~~~~~~~~~~--------- 228 (355)
.|.|+|+++++. ..+.+..++.+|+|++++++|+ ||+++.+.. .|.++. .|...+...
T Consensus 173 ~G~IlRi~~dG~ip~~nPf~~~~i~a~G~RNp~Gla~dp~G~-L~~~d~g~~~~deln~i~-~G~nyGwP~~~g~~~~~~ 250 (347)
T 3das_A 173 GGKILRMTPDGEPAPGNPFPGSPVYSYGHRNVQGLAWDDKQR-LFASEFGQDTWDELNAIK-PGDNYGWPEAEGKGGGSG 250 (347)
T ss_dssp TTCEEEECTTSSBCTTCSSTTCCEEEBCCSBCCEEEECTTCC-EEEEECCSSSCEEEEEEC-TTCBCCTTTCCSSCCCTT
T ss_pred CCEEEEEeCCCCccCCCCCCCCeEEeeCCCCcceEEECCCCC-EEEEecCCCCCceeeEEc-CCCEecCCcccCCCCCcc
Confidence 678999999754 3456778899999999999987 999997654 344443 232111100
Q ss_pred ---EecccCC--CCcCceEECCCCCEEEEeec
Q 018474 229 ---AFIENLP--GGPDNINLAPDGSFWIGLIK 255 (355)
Q Consensus 229 ---~~~~~~~--g~p~~i~~d~~G~lwv~~~~ 255 (355)
....-.+ .-|.|+++. +|.+|++...
T Consensus 251 ~~~P~~~~~~~~~ap~G~~~~-~g~~~~~~l~ 281 (347)
T 3das_A 251 FHDPVAQWSTDEASPSGIAYA-EGSVWMAGLR 281 (347)
T ss_dssp CCCCSEEECTTTCCEEEEEEE-TTEEEEEEST
T ss_pred ccCCcEecCCCCCCCcceEEE-cCceeecccc
Confidence 0000001 246788886 4889998865
No 78
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.46 E-value=6.9e-12 Score=119.61 Aligned_cols=182 Identities=15% Similarity=0.137 Sum_probs=124.5
Q ss_pred CCCCCceEEE-------eeCCCeEEEEecCC-------EEEEEEcCC-CeeE------EeeccCCCcccCeEECC-CCCE
Q 018474 50 CVNHPEDVSV-------VVSKGALYTATRDG-------WVKYFILHN-ETLV------NWKHIDSQSLLGLTTTK-DGGV 107 (355)
Q Consensus 50 ~~~~p~~i~~-------d~~~g~l~~~~~~g-------~i~~~~~~~-g~~~------~~~~~~~~p~~gl~~d~-~g~L 107 (355)
.+..|.+|++ +++++.||++...+ .++.++... |.+. .+. ...+|+ ++++|+ +|+|
T Consensus 184 ~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~-~~~~p~-giavdp~~g~L 261 (496)
T 3kya_A 184 PTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIA-AYKQCN-GATIHPINGEL 261 (496)
T ss_dssp SCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEE-EESCCC-CEEECTTTCCE
T ss_pred ccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeec-cCCCce-EEEEcCCCCeE
Confidence 3567999999 96666799987654 378887543 4442 222 345799 999998 6899
Q ss_pred EEEeCCCc-EEEEc-C-------CC-e-------------EEEcCC-cCCcccEEEccCCc-EEEEeCCCCCCCcccccc
Q 018474 108 ILCDNEKG-LLKVT-E-------EG-V-------------EAIVPD-ASFTNDVIAASDGT-LYFTVASTKYTPTDFYKD 162 (355)
Q Consensus 108 ~v~~~~~g-l~~~~-~-------~g-~-------------~~~~~~-~~~~~~l~~d~dG~-ly~~d~~~~~~~~~~~~~ 162 (355)
|+++...+ +++++ . ++ + +.+... ...|.+++++++|+ ||++|..
T Consensus 262 Yvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~----------- 330 (496)
T 3kya_A 262 YFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVIN----------- 330 (496)
T ss_dssp EEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETT-----------
T ss_pred EEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCC-----------
Confidence 99998866 88998 4 45 4 222121 25789999999997 8999976
Q ss_pred ccccCCCCeEEEE--eCCCCeE---EEeec---------------cccccc-cEEEe-------CCCCEEEEEeCCCCeE
Q 018474 163 MAEGKPYGQLRKY--DPKLKET---TVLHE---------------GFYFAN-GIALS-------KNEDFVVVCESWKFRC 214 (355)
Q Consensus 163 ~~~~~~~g~l~~~--dp~~~~~---~~~~~---------------~~~~pn-gi~~~-------~dg~~l~v~~~~~~~i 214 (355)
..+|+++ |..++.+ +.+.. .+..|. |++++ .++ .||++++..++|
T Consensus 331 ------~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g-~lyVaD~~N~rI 403 (496)
T 3kya_A 331 ------NHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEY-DFYFVDRLNFCV 403 (496)
T ss_dssp ------TTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCE-EEEEEEGGGTEE
T ss_pred ------CCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCC-eEEEEECCCCEE
Confidence 4467774 4444443 22221 234688 78886 455 499999999999
Q ss_pred EEEEeCCCCCcceeEecc-----------------c-C-----CCCcCceEECCC-CCEEEEeec
Q 018474 215 RRYWLKGDRAGILDAFIE-----------------N-L-----PGGPDNINLAPD-GSFWIGLIK 255 (355)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~-----------------~-~-----~g~p~~i~~d~~-G~lwv~~~~ 255 (355)
++++.+| ...+++. + . -..|.++++|++ |+|||++..
T Consensus 404 r~i~~~G----~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~ 464 (496)
T 3kya_A 404 RKVTPEG----IVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQV 464 (496)
T ss_dssp EEECTTC----BEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETT
T ss_pred EEEeCCC----CEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCC
Confidence 9998654 2222221 1 0 024788999996 999999966
No 79
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.46 E-value=6.6e-12 Score=113.48 Aligned_cols=193 Identities=14% Similarity=0.094 Sum_probs=129.4
Q ss_pred CCcccCeEECCCCCEEEEeCC-CcEEEEcCCC-eEEEcCCcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCC
Q 018474 93 SQSLLGLTTTKDGGVILCDNE-KGLLKVTEEG-VEAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYG 170 (355)
Q Consensus 93 ~~p~~gl~~d~~g~L~v~~~~-~gl~~~~~~g-~~~~~~~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g 170 (355)
..|. ++++|++|+||+++.. +.|+++++++ ..........|++++++++|++|+++.. ....
T Consensus 32 ~~pe-gia~~~~g~lyv~d~~~~~I~~~d~~g~~~~~~~~~~~p~gia~~~dG~l~vad~~---------------~~~~ 95 (306)
T 2p4o_A 32 TFLE-NLASAPDGTIFVTNHEVGEIVSITPDGNQQIHATVEGKVSGLAFTSNGDLVATGWN---------------ADSI 95 (306)
T ss_dssp CCEE-EEEECTTSCEEEEETTTTEEEEECTTCCEEEEEECSSEEEEEEECTTSCEEEEEEC---------------TTSC
T ss_pred CCcc-eEEECCCCCEEEEeCCCCeEEEECCCCceEEEEeCCCCceeEEEcCCCcEEEEecc---------------CCcc
Confidence 5688 9999999999999955 5688998766 4333222357999999999999999853 1123
Q ss_pred eEEEEeCCCCeEEEeec--cccccccEEEeCCCCEEEEEeCCCCeEEEEEeCCCCCcceeE---------ecccCCCCcC
Q 018474 171 QLRKYDPKLKETTVLHE--GFYFANGIALSKNEDFVVVCESWKFRCRRYWLKGDRAGILDA---------FIENLPGGPD 239 (355)
Q Consensus 171 ~l~~~dp~~~~~~~~~~--~~~~pngi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~---------~~~~~~g~p~ 239 (355)
.++++|+.+++++.+.. ...+++|++..+++ .+|+++...++|++++..+... .... ....+ ..|+
T Consensus 96 ~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~-~~~v~d~~~g~i~~~d~~~~~~-~v~~~~~~~~~~~~~~~~-~~pn 172 (306)
T 2p4o_A 96 PVVSLVKSDGTVETLLTLPDAIFLNGITPLSDT-QYLTADSYRGAIWLIDVVQPSG-SIWLEHPMLARSNSESVF-PAAN 172 (306)
T ss_dssp EEEEEECTTSCEEEEEECTTCSCEEEEEESSSS-EEEEEETTTTEEEEEETTTTEE-EEEEECGGGSCSSTTCCS-CSEE
T ss_pred eEEEEcCCCCeEEEEEeCCCccccCcccccCCC-cEEEEECCCCeEEEEeCCCCcE-eEEEECCccccccccCCC-CcCC
Confidence 68999988888776543 35678999987655 5999998889999999753210 1100 00111 2477
Q ss_pred ceEECCCC-CEEEEeecCCchhhHhhhcchhHHHHHHhccchhhcccCCCCCCceEEEEEeCC-CCeE--EEEEECCCCC
Q 018474 240 NINLAPDG-SFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGN-DGKI--IRDFNDPDAT 315 (355)
Q Consensus 240 ~i~~d~~G-~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~g~~--~~~~~~~~g~ 315 (355)
++ +++| .+|++.... ..|.+|+.+ +|+. .+.+..-
T Consensus 173 gi--s~dg~~lyv~d~~~------------------------------------~~I~~~~~~~~g~~~~~~~~~~~--- 211 (306)
T 2p4o_A 173 GL--KRFGNFLYVSNTEK------------------------------------MLLLRIPVDSTDKPGEPEIFVEQ--- 211 (306)
T ss_dssp EE--EEETTEEEEEETTT------------------------------------TEEEEEEBCTTSCBCCCEEEEES---
T ss_pred Cc--CcCCCEEEEEeCCC------------------------------------CEEEEEEeCCCCCCCccEEEecc---
Confidence 77 4455 699988542 368888862 1331 1222110
Q ss_pred cccceeEEEEe-CCEEEEeecCCCeEEEeeCCC
Q 018474 316 YISFVTSAAEF-DGNLYLASLQSNFIGILPLDG 347 (355)
Q Consensus 316 ~~~~~~~~~~~-~g~L~v~~~~~~~i~~~~~~~ 347 (355)
..+..++.+ +|+||+++..+++|.++...+
T Consensus 212 --~~P~gi~vd~dG~l~va~~~~~~V~~~~~~G 242 (306)
T 2p4o_A 212 --TNIDDFAFDVEGNLYGATHIYNSVVRIAPDR 242 (306)
T ss_dssp --CCCSSEEEBTTCCEEEECBTTCCEEEECTTC
T ss_pred --CCCCCeEECCCCCEEEEeCCCCeEEEECCCC
Confidence 122334544 589999999999999998664
No 80
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.46 E-value=5.4e-12 Score=115.94 Aligned_cols=182 Identities=12% Similarity=0.104 Sum_probs=127.0
Q ss_pred CCCCCCceEEEeeCCCeEEEEec------CCEEEEEEcCCCeeE-Eeecc------CCCcccCeEECC-CCCEEEEeC--
Q 018474 49 GCVNHPEDVSVVVSKGALYTATR------DGWVKYFILHNETLV-NWKHI------DSQSLLGLTTTK-DGGVILCDN-- 112 (355)
Q Consensus 49 ~~~~~p~~i~~d~~~g~l~~~~~------~g~i~~~~~~~g~~~-~~~~~------~~~p~~gl~~d~-~g~L~v~~~-- 112 (355)
+.+..|.++++| .++.||+... .++|+++|+++++.. .+... ...+. ++++|+ +|.+|+++.
T Consensus 64 ~~~~~p~gv~~d-~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~-~v~vd~~~g~~yvtd~~~ 141 (343)
T 2qe8_A 64 ITFDTVLGIKSD-GNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVN-DLAVDLIHNFVYISDPAP 141 (343)
T ss_dssp CCCSCEEEEEEC-SSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCC-EEEEETTTTEEEEEECCS
T ss_pred cceeEeeEEEEc-CCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccc-eEEEecCCCEEEEEcCcc
Confidence 346789999999 5678888764 478999999888843 33221 13468 899995 578999986
Q ss_pred -C-CcEEEEcC-CC-eEEEcCC------------------------------cCCcccEEEccCC-cEEEEeCCCCCCCc
Q 018474 113 -E-KGLLKVTE-EG-VEAIVPD------------------------------ASFTNDVIAASDG-TLYFTVASTKYTPT 157 (355)
Q Consensus 113 -~-~gl~~~~~-~g-~~~~~~~------------------------------~~~~~~l~~d~dG-~ly~~d~~~~~~~~ 157 (355)
. .++++++. ++ ...+... ...+++|++++|| .||+++..
T Consensus 142 ~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~------ 215 (343)
T 2qe8_A 142 DDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMH------ 215 (343)
T ss_dssp GGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESS------
T ss_pred CCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCC------
Confidence 3 56888884 56 4332211 0236899999999 69998765
Q ss_pred cccccccccCCCCeEEEEeCC---CCe---------EEEeeccccccccEEEeCCCCEEEEEeCCCCeEEEEEe-CCCCC
Q 018474 158 DFYKDMAEGKPYGQLRKYDPK---LKE---------TTVLHEGFYFANGIALSKNEDFVVVCESWKFRCRRYWL-KGDRA 224 (355)
Q Consensus 158 ~~~~~~~~~~~~g~l~~~dp~---~~~---------~~~~~~~~~~pngi~~~~dg~~l~v~~~~~~~i~~~~~-~~~~~ 224 (355)
...+++++.. .+. +... .....|+|++++++|+ +|+++...++|.+|+. ++
T Consensus 216 -----------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-g~~g~pdgia~d~~G~-l~va~~~~~~V~~~d~~~G--- 279 (343)
T 2qe8_A 216 -----------STSMYRIKSADLSNLQLTDAELGSKIERY-SEKPICDGISIDKDHN-IYVGDLAHSAIGVITSADR--- 279 (343)
T ss_dssp -----------CSEEEEEEHHHHTCTTCCHHHHHTTCEEE-EECCSCSCEEECTTCC-EEEEEGGGTEEEEEETTTT---
T ss_pred -----------CCeEEEEEHHHhcCCCCChhhhhcceEec-ccCCCCceEEECCCCC-EEEEccCCCeEEEEECCCC---
Confidence 3367887632 110 1111 1223699999999997 9999999999999997 43
Q ss_pred cceeEeccc-CCCCcCceEECCCCCEEEEeec
Q 018474 225 GILDAFIEN-LPGGPDNINLAPDGSFWIGLIK 255 (355)
Q Consensus 225 ~~~~~~~~~-~~g~p~~i~~d~~G~lwv~~~~ 255 (355)
+.+.+... ....|++++++++|++||++.+
T Consensus 280 -~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~ 310 (343)
T 2qe8_A 280 -AYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQ 310 (343)
T ss_dssp -EEEEEEECGGGSCEEEEEECTTSCEEEEECC
T ss_pred -CEEEEEECCceecCCeeEECCCCcEEEEeCc
Confidence 23333321 1246999999999999999876
No 81
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.46 E-value=3.2e-12 Score=121.19 Aligned_cols=199 Identities=12% Similarity=0.057 Sum_probs=134.4
Q ss_pred CcccCeEECC--CCCEEEEeCCCcEEEEcC-CC-eEEEcCCcCCcccEEEccCCc-EEEEeCCCCCCCccccccccccCC
Q 018474 94 QSLLGLTTTK--DGGVILCDNEKGLLKVTE-EG-VEAIVPDASFTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEGKP 168 (355)
Q Consensus 94 ~p~~gl~~d~--~g~L~v~~~~~gl~~~~~-~g-~~~~~~~~~~~~~l~~d~dG~-ly~~d~~~~~~~~~~~~~~~~~~~ 168 (355)
.|. +|++|+ +|+||+++..+.|.+++. .+ ++.+......|++++++++|+ ||+++.... ..
T Consensus 138 ~P~-~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~-------------~~ 203 (430)
T 3tc9_A 138 GAV-WLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNN-------------ND 203 (430)
T ss_dssp CCC-EEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSC-------------TT
T ss_pred CCC-EEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCC-------------cc
Confidence 588 999995 589999997667888885 45 666655557899999999997 999987511 11
Q ss_pred CCeEEEEeCCCCeE--EEeeccccccccEEEeCCCCEEEEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCC
Q 018474 169 YGQLRKYDPKLKET--TVLHEGFYFANGIALSKNEDFVVVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPD 246 (355)
Q Consensus 169 ~g~l~~~dp~~~~~--~~~~~~~~~pngi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~ 246 (355)
...++.++++++.. ..+. .+..|++++++|++..+|+++...++|++|+.++.... ..+.......|.++++|++
T Consensus 204 ~~~v~~~~~~g~~~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~--~~~~~~~~~~P~gia~~pd 280 (430)
T 3tc9_A 204 RPNNYILTRESGFKVITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETT--PLFTIQDSGWEFHIQFHPS 280 (430)
T ss_dssp SEEEEEEEGGGTSCSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEE--EEEECSSSSCCEEEEECTT
T ss_pred cceEEEEeCCCceeeeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEE--EEEEcCCCCcceeEEEcCC
Confidence 22466666543321 2222 46789999999944459999999999999998653221 1111112246999999999
Q ss_pred CC-EEEEeecCCchhhHhhhcchhHHHHHHhccchhhcccCCCCCCceEEEEEeCCCC---eE--EEEEECC-------C
Q 018474 247 GS-FWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDG---KI--IRDFNDP-------D 313 (355)
Q Consensus 247 G~-lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g---~~--~~~~~~~-------~ 313 (355)
|+ +||+.... ..|.+++. ++ +. ...+... +
T Consensus 281 G~~lyv~d~~~------------------------------------~~I~~~~~-d~~~~~~~~~~~~ag~~g~~g~~d 323 (430)
T 3tc9_A 281 GNYAYIVVVNQ------------------------------------HYILRSDY-DWKTKRLTTPYIVCGQQGAKDWVD 323 (430)
T ss_dssp SSEEEEEETTT------------------------------------TEEEEEEE-ETTTTEECCCEEEEECTTCBCCBC
T ss_pred CCEEEEEECCC------------------------------------CEEEEEeC-CcccccccceEEEeccCCCCCCCC
Confidence 98 99988552 36777766 43 22 1222221 1
Q ss_pred C----Cccccee-EEEEe---------CCEEEEeecCCCeEEEeeCC
Q 018474 314 A----TYISFVT-SAAEF---------DGNLYLASLQSNFIGILPLD 346 (355)
Q Consensus 314 g----~~~~~~~-~~~~~---------~g~L~v~~~~~~~i~~~~~~ 346 (355)
| ..+..+. .++.+ +|+||+++..+.+|.++..+
T Consensus 324 g~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~~~ 370 (430)
T 3tc9_A 324 GVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILTPQ 370 (430)
T ss_dssp EEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEECTT
T ss_pred CCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEECCC
Confidence 1 1133444 45543 48999999999999999743
No 82
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.45 E-value=2.4e-10 Score=103.44 Aligned_cols=182 Identities=9% Similarity=0.071 Sum_probs=119.6
Q ss_pred CCCceEEEeeCCCeEEEEec-CCEEEEEEcCCCe---eEEeeccCCCcccCeEECCCCC-EEEEe-CCCcEEEEc-CC-C
Q 018474 52 NHPEDVSVVVSKGALYTATR-DGWVKYFILHNET---LVNWKHIDSQSLLGLTTTKDGG-VILCD-NEKGLLKVT-EE-G 123 (355)
Q Consensus 52 ~~p~~i~~d~~~g~l~~~~~-~g~i~~~~~~~g~---~~~~~~~~~~p~~gl~~d~~g~-L~v~~-~~~gl~~~~-~~-g 123 (355)
..|.++++++++..+|++.. ++.|..++..++. ..........+. +++++++|+ ||+++ ..+.+..++ .+ +
T Consensus 84 ~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~ 162 (343)
T 1ri6_A 84 GSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCH-SANISPDNRTLWVPALKQDRICLFTVSDDG 162 (343)
T ss_dssp SCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBC-CCEECTTSSEEEEEEGGGTEEEEEEECTTS
T ss_pred CCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCCCce-EEEECCCCCEEEEecCCCCEEEEEEecCCC
Confidence 38999999977777888776 7889888874433 222223345688 999999986 78877 334566766 44 6
Q ss_pred -eEEE-----cC-CcCCcccEEEccCCc-EEEEeCCCCCCCccccccccccCCCCeEEEEeC--CCCeEEEeec------
Q 018474 124 -VEAI-----VP-DASFTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDP--KLKETTVLHE------ 187 (355)
Q Consensus 124 -~~~~-----~~-~~~~~~~l~~d~dG~-ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp--~~~~~~~~~~------ 187 (355)
+... .. ....|++++++++|+ +|+++.. .+.+..|+. .+++++....
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~-----------------~~~i~~~~~~~~~g~~~~~~~~~~~~~ 225 (343)
T 1ri6_A 163 HLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNEL-----------------NSSVDVWELKDPHGNIECVQTLDMMPE 225 (343)
T ss_dssp CEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETT-----------------TTEEEEEESSCTTSCCEEEEEEECSCT
T ss_pred ceeeecccccccCCCCCcceEEECCCCCEEEEEeCC-----------------CCEEEEEEecCCCCcEEEEeeccccCc
Confidence 4322 21 125788999999995 8887643 345666665 3454432211
Q ss_pred c---ccccccEEEeCCCCEEEEEeCCCCeEEEEEeCC--CCCcceeEecccCCCCcCceEECCCCC-EEEEe
Q 018474 188 G---FYFANGIALSKNEDFVVVCESWKFRCRRYWLKG--DRAGILDAFIENLPGGPDNINLAPDGS-FWIGL 253 (355)
Q Consensus 188 ~---~~~pngi~~~~dg~~l~v~~~~~~~i~~~~~~~--~~~~~~~~~~~~~~g~p~~i~~d~~G~-lwv~~ 253 (355)
+ ...+.+++++||++.+|++....+.|..|+++. ........+ ...+.|.++.++++|+ ++++.
T Consensus 226 ~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~--~~~~~~~~~~~s~dg~~l~~~~ 295 (343)
T 1ri6_A 226 NFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQ--PTETQPRGFNVDHSGKYLIAAG 295 (343)
T ss_dssp TCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEE--ECSSSCCCEEECTTSSEEEEEC
T ss_pred cccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeee--cCCCccceEEECCCCCEEEEec
Confidence 1 123446999999999999988888999999862 222222212 1223488999999998 56555
No 83
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.43 E-value=1.3e-10 Score=104.88 Aligned_cols=227 Identities=11% Similarity=-0.013 Sum_probs=150.4
Q ss_pred CCceEEEeeCCCeEEEEec-CCEEEEEEcCCCeeEEeeccCC------CcccCeEECCCC-CEEEEe------------C
Q 018474 53 HPEDVSVVVSKGALYTATR-DGWVKYFILHNETLVNWKHIDS------QSLLGLTTTKDG-GVILCD------------N 112 (355)
Q Consensus 53 ~p~~i~~d~~~g~l~~~~~-~g~i~~~~~~~g~~~~~~~~~~------~p~~gl~~d~~g-~L~v~~------------~ 112 (355)
.|.+++++++++.+|++.. ++.|..+|..+++......... .|. +++++++| .||++. .
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~~~~~~~~~ 113 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLF-GAALSPDGKTLAIYESPVRLELTHFEVQ 113 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTT-CEEECTTSSEEEEEEEEEEECSSCEEEC
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccccccc-ceEECCCCCEEEEEeccccccccccccc
Confidence 5999999976668887765 6899999998887654333222 688 99999998 578875 2
Q ss_pred CCcEEEEcC-CC--eEEEcCCcCCcccEEEccCCc-EEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeecc
Q 018474 113 EKGLLKVTE-EG--VEAIVPDASFTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEG 188 (355)
Q Consensus 113 ~~gl~~~~~-~g--~~~~~~~~~~~~~l~~d~dG~-ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~ 188 (355)
.+.+..++. ++ ...+.. ...+.+++++++|+ ||+++ +.++.||.++++.......
T Consensus 114 ~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~--------------------~~i~~~d~~~~~~~~~~~~ 172 (337)
T 1pby_B 114 PTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGLG--------------------RDLHVMDPEAGTLVEDKPI 172 (337)
T ss_dssp CCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEES--------------------SSEEEEETTTTEEEEEECS
T ss_pred CceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEeC--------------------CeEEEEECCCCcEeeeeec
Confidence 356888884 55 333333 25688999999995 88872 2588999988876544333
Q ss_pred ccccccEEEeCCCCEEEEEeCCCC-----------------------eEEEEEeCCCCCcceeEecccCCCCcCceEECC
Q 018474 189 FYFANGIALSKNEDFVVVCESWKF-----------------------RCRRYWLKGDRAGILDAFIENLPGGPDNINLAP 245 (355)
Q Consensus 189 ~~~pngi~~~~dg~~l~v~~~~~~-----------------------~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~ 245 (355)
...+..++++||++.+|++....+ .|+.++++..+.... .+ ......|.++.+++
T Consensus 173 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~-~~-~~~~~~~~~~~~s~ 250 (337)
T 1pby_B 173 QSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMR-EV-RIMDVFYFSTAVNP 250 (337)
T ss_dssp TTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEE-EE-EECSSCEEEEEECT
T ss_pred cccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEe-ec-CCCCCceeeEEECC
Confidence 332345688999988877665444 356777654332211 11 12233567789999
Q ss_pred CCC-EEEEeecCCchhhHhhhcchhHHHHHHhccchhhcccCCCCCCceEEEEEeCCCCeEEEEEECCCCCcccceeEEE
Q 018474 246 DGS-FWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAA 324 (355)
Q Consensus 246 ~G~-lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~ 324 (355)
+|+ +|++ . +.|..+|.++++....+.... .+..+.
T Consensus 251 dg~~l~~~--~-------------------------------------~~v~~~d~~~~~~~~~~~~~~-----~~~~~~ 286 (337)
T 1pby_B 251 AKTRAFGA--Y-------------------------------------NVLESFDLEKNASIKRVPLPH-----SYYSVN 286 (337)
T ss_dssp TSSEEEEE--E-------------------------------------SEEEEEETTTTEEEEEEECSS-----CCCEEE
T ss_pred CCCEEEEe--C-------------------------------------CeEEEEECCCCcCcceecCCC-----ceeeEE
Confidence 997 5555 2 258889986777777776432 233444
Q ss_pred Ee--CCEEEEeecCCCeEEEeeCCCC
Q 018474 325 EF--DGNLYLASLQSNFIGILPLDGP 348 (355)
Q Consensus 325 ~~--~g~L~v~~~~~~~i~~~~~~~~ 348 (355)
.. +..||+++. .+.|.++++.+-
T Consensus 287 ~s~dg~~l~~~~~-~~~i~v~d~~~~ 311 (337)
T 1pby_B 287 VSTDGSTVWLGGA-LGDLAAYDAETL 311 (337)
T ss_dssp ECTTSCEEEEESB-SSEEEEEETTTC
T ss_pred ECCCCCEEEEEcC-CCcEEEEECcCC
Confidence 43 356888754 778888887653
No 84
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.42 E-value=1.7e-11 Score=107.86 Aligned_cols=198 Identities=11% Similarity=0.074 Sum_probs=136.6
Q ss_pred CcccCeEECCCCCEEEEeCC---CcEEEEc-CCC--eEEEcCC-cCCcccEEEccCCcEEEEeCCCCCCCcccccccccc
Q 018474 94 QSLLGLTTTKDGGVILCDNE---KGLLKVT-EEG--VEAIVPD-ASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEG 166 (355)
Q Consensus 94 ~p~~gl~~d~~g~L~v~~~~---~gl~~~~-~~g--~~~~~~~-~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~ 166 (355)
.++ ||+++++|+||+++.. ..+..+| ++| +..+... ..+..+++++ .++||+++..
T Consensus 22 f~~-Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~-g~~lyv~t~~--------------- 84 (266)
T 2iwa_A 22 FTQ-GLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL-NEKLYQVVWL--------------- 84 (266)
T ss_dssp CEE-EEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE-TTEEEEEETT---------------
T ss_pred Ccc-cEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe-CCEEEEEEec---------------
Confidence 478 9999988999999742 4588888 477 4444322 2455667776 3589999765
Q ss_pred CCCCeEEEEeCCCCeEEEeeccccccccEEEeCCCCEEEEEeCCCCeEEEEEeCCCCC-cceeEecccCC-CCcCceEEC
Q 018474 167 KPYGQLRKYDPKLKETTVLHEGFYFANGIALSKNEDFVVVCESWKFRCRRYWLKGDRA-GILDAFIENLP-GGPDNINLA 244 (355)
Q Consensus 167 ~~~g~l~~~dp~~~~~~~~~~~~~~pngi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~-g~p~~i~~d 244 (355)
.+.++.||+++.+...-..-. .|.|..+++||+.+|+++ +.+.|+.+|.++.+. ....+-....+ ..|+++.+.
T Consensus 85 --~~~v~viD~~t~~v~~~i~~g-~~~g~glt~Dg~~l~vs~-gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~ 160 (266)
T 2iwa_A 85 --KNIGFIYDRRTLSNIKNFTHQ-MKDGWGLATDGKILYGSD-GTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI 160 (266)
T ss_dssp --CSEEEEEETTTTEEEEEEECC-SSSCCEEEECSSSEEEEC-SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE
T ss_pred --CCEEEEEECCCCcEEEEEECC-CCCeEEEEECCCEEEEEC-CCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE
Confidence 568999999888654333222 478888999999999998 688999999865332 11111100111 236677766
Q ss_pred CCCCEEEEeecCCchhhHhhhcchhHHHHHHhccchhhcccCCCCCCceEEEEEeCCCCeEEEEEECCCC---------C
Q 018474 245 PDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDA---------T 315 (355)
Q Consensus 245 ~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g---------~ 315 (355)
+|.+|+..... +.|.++|+++|+.+..+..+.. .
T Consensus 161 -dg~lyvn~~~~------------------------------------~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~ 203 (266)
T 2iwa_A 161 -NGEVWANIWQT------------------------------------DCIARISAKDGTLLGWILLPNLRKKLIDEGFR 203 (266)
T ss_dssp -TTEEEEEETTS------------------------------------SEEEEEETTTCCEEEEEECHHHHHHHHHTTCT
T ss_pred -CCEEEEecCCC------------------------------------CeEEEEECCCCcEEEEEECCCccccccccccc
Confidence 68999887542 4799999989999888865310 0
Q ss_pred cccceeEEEEe--CCEEEEeecCCCeEEEeeCCCCC
Q 018474 316 YISFVTSAAEF--DGNLYLASLQSNFIGILPLDGPE 349 (355)
Q Consensus 316 ~~~~~~~~~~~--~g~L~v~~~~~~~i~~~~~~~~~ 349 (355)
......+++.+ +++||+++...+.|.++++....
T Consensus 204 ~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~~ 239 (266)
T 2iwa_A 204 DIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLVR 239 (266)
T ss_dssp TCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEECC
T ss_pred ccCceEEEEEcCCCCEEEEECCCCCeEEEEEEeccc
Confidence 01244566655 47999999999999999987654
No 85
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.42 E-value=1.7e-10 Score=104.44 Aligned_cols=239 Identities=13% Similarity=0.101 Sum_probs=149.4
Q ss_pred CCCCceEEEeeCCCeEEEEecC-CEEEEEEcC--CCeeEEee--ccCCCcccCeEECCCCC-EEEEeCCCc-EEEEcC-C
Q 018474 51 VNHPEDVSVVVSKGALYTATRD-GWVKYFILH--NETLVNWK--HIDSQSLLGLTTTKDGG-VILCDNEKG-LLKVTE-E 122 (355)
Q Consensus 51 ~~~p~~i~~d~~~g~l~~~~~~-g~i~~~~~~--~g~~~~~~--~~~~~p~~gl~~d~~g~-L~v~~~~~g-l~~~~~-~ 122 (355)
...|.++++++++..+|++..+ +.|..++.. +++.+... .....|. +++++++|+ ||++....+ +..++. +
T Consensus 37 ~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~ 115 (343)
T 1ri6_A 37 PGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLT-HISTDHQGQFVFVGSYNAGNVSVTRLED 115 (343)
T ss_dssp SSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCS-EEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred CCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCCCCc-EEEEcCCCCEEEEEecCCCeEEEEECCC
Confidence 3679999999777779988875 888887765 66654332 2234688 999999997 778776545 555553 3
Q ss_pred C--eEE--EcCCcCCcccEEEccCC-cEEEEeCCCCCCCccccccccccCCCCeEEEEeCCC-CeEEEee------cccc
Q 018474 123 G--VEA--IVPDASFTNDVIAASDG-TLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKL-KETTVLH------EGFY 190 (355)
Q Consensus 123 g--~~~--~~~~~~~~~~l~~d~dG-~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~-~~~~~~~------~~~~ 190 (355)
+ .+. .......+++++++++| .+|+++.. .+.+..||..+ ++..... ....
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~-----------------~~~v~~~d~~~~~~~~~~~~~~~~~~~~~ 178 (343)
T 1ri6_A 116 GLPVGVVDVVEGLDGCHSANISPDNRTLWVPALK-----------------QDRICLFTVSDDGHLVAQDPAEVTTVEGA 178 (343)
T ss_dssp TEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGG-----------------GTEEEEEEECTTSCEEEEEEEEEECSTTC
T ss_pred CccccccccccCCCCceEEEECCCCCEEEEecCC-----------------CCEEEEEEecCCCceeeecccccccCCCC
Confidence 3 121 11222568999999999 48777533 35688888765 6554221 2234
Q ss_pred ccccEEEeCCCCEEEEEeCCCCeEEEEEeCCC--CCcceeEecccCC------CCcCceEECCCCC-EEEEeecCCchhh
Q 018474 191 FANGIALSKNEDFVVVCESWKFRCRRYWLKGD--RAGILDAFIENLP------GGPDNINLAPDGS-FWIGLIKMNQTGV 261 (355)
Q Consensus 191 ~pngi~~~~dg~~l~v~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~------g~p~~i~~d~~G~-lwv~~~~~~~~~~ 261 (355)
.|.+++++||++.+|++....+.|..|+++.. .......+. ..+ ..+..+.++++|+ +|++....
T Consensus 179 ~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~----- 252 (343)
T 1ri6_A 179 GPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLD-MMPENFSDTRWAADIHITPDGRHLYACDRTA----- 252 (343)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEE-CSCTTCCSCCCEEEEEECTTSSEEEEEETTT-----
T ss_pred CcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeecc-ccCccccccCCccceEECCCCCEEEEEecCC-----
Confidence 67889999999999999888889999998532 121111111 111 1234588999996 55555331
Q ss_pred HhhhcchhHHHHHHhccchhhcccCCCCCCceEEEEEeCC--CCe--EEEEEECCCCCcccceeEEEEe--CCEEEEeec
Q 018474 262 RAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGN--DGK--IIRDFNDPDATYISFVTSAAEF--DGNLYLASL 335 (355)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~g~--~~~~~~~~~g~~~~~~~~~~~~--~g~L~v~~~ 335 (355)
+.|..++.+ .++ .+..+.... .+..+... +..||+++.
T Consensus 253 -------------------------------~~i~v~d~~~~~~~~~~~~~~~~~~-----~~~~~~~s~dg~~l~~~~~ 296 (343)
T 1ri6_A 253 -------------------------------SLITVFSVSEDGSVLSKEGFQPTET-----QPRGFNVDHSGKYLIAAGQ 296 (343)
T ss_dssp -------------------------------TEEEEEEECTTSCCEEEEEEEECSS-----SCCCEEECTTSSEEEEECT
T ss_pred -------------------------------CEEEEEEEcCCCCceEEeeeecCCC-----ccceEEECCCCCEEEEecC
Confidence 245555542 222 233333221 13334443 466999887
Q ss_pred CCCeEEEeeCCCCC
Q 018474 336 QSNFIGILPLDGPE 349 (355)
Q Consensus 336 ~~~~i~~~~~~~~~ 349 (355)
..+.|..++++...
T Consensus 297 ~~~~v~v~~~d~~~ 310 (343)
T 1ri6_A 297 KSHHISVYEIVGEQ 310 (343)
T ss_dssp TTCEEEEEEEETTT
T ss_pred CCCeEEEEEEcCCC
Confidence 78888888665443
No 86
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.41 E-value=3.1e-11 Score=111.36 Aligned_cols=215 Identities=16% Similarity=0.147 Sum_probs=135.3
Q ss_pred eeEEeeccCCCcccCeEECCCCCEEEEeCCCcEEEEcCCC-eEEEc------CCcCCcccEEEccC----CcEEEEeCCC
Q 018474 84 TLVNWKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVTEEG-VEAIV------PDASFTNDVIAASD----GTLYFTVAST 152 (355)
Q Consensus 84 ~~~~~~~~~~~p~~gl~~d~~g~L~v~~~~~gl~~~~~~g-~~~~~------~~~~~~~~l~~d~d----G~ly~~d~~~ 152 (355)
+.+.+......|. +|+++++|+|||++..+.|++++ +| .+.+. .....|++|+++++ |.||+++...
T Consensus 22 ~~~~va~~l~~P~-~ia~~pdG~l~V~e~~g~I~~i~-~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~ 99 (352)
T 2ism_A 22 RVEEVVGGLEVPW-ALAFLPDGGMLIAERPGRIRLFR-EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVA 99 (352)
T ss_dssp CEEEEECCCSCEE-EEEECTTSCEEEEETTTEEEEEE-TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEC
T ss_pred EEEEEECCCCCce-EEEEcCCCeEEEEeCCCeEEEEE-CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecC
Confidence 4455555556799 99999999999999877788887 55 43322 12268999999997 7999987531
Q ss_pred CCCCccccccccccCCCCeEEEEeCCCCe---EEEeec-------cccccccEEEeCCCCEEEEEeC-------------
Q 018474 153 KYTPTDFYKDMAEGKPYGQLRKYDPKLKE---TTVLHE-------GFYFANGIALSKNEDFVVVCES------------- 209 (355)
Q Consensus 153 ~~~~~~~~~~~~~~~~~g~l~~~dp~~~~---~~~~~~-------~~~~pngi~~~~dg~~l~v~~~------------- 209 (355)
. .....+|++++.++++ .+.+.. ....+++++++|||. ||++..
T Consensus 100 ~------------~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~-Lyv~~G~~~~~~~~~d~~~ 166 (352)
T 2ism_A 100 E------------GGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGM-LYVTTGEVYERELAQDLAS 166 (352)
T ss_dssp T------------TSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSC-EEEECCCTTCGGGGGCTTC
T ss_pred C------------CCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCC-EEEEECCCCCCccccCCCC
Confidence 0 0012478888876442 222222 234688999999996 999863
Q ss_pred CCCeEEEEEeCCCCC----------cceeEecccCCCCcCceEECC-CCCEEEEeecCCchhhHhhhcchhHHHHHHhcc
Q 018474 210 WKFRCRRYWLKGDRA----------GILDAFIENLPGGPDNINLAP-DGSFWIGLIKMNQTGVRAIQKCREKWELLDAYP 278 (355)
Q Consensus 210 ~~~~i~~~~~~~~~~----------~~~~~~~~~~~g~p~~i~~d~-~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (355)
..++|+|++.++.-. ...+.+...+ ..|.++++|+ +|+||++..+.... +. .
T Consensus 167 ~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~-rnp~g~a~d~~~g~l~v~d~g~~~~-----------~~----~- 229 (352)
T 2ism_A 167 LGGKILRLTPEGEPAPGNPFLGRRGARPEVYSLGH-RNPQGLAWHPKTGELFSSEHGPSGE-----------QG----Y- 229 (352)
T ss_dssp SSSEEEEECTTSSBCTTCTTTTCTTSCTTEEEECC-SEECCCEECTTTCCEEEEEECC----------------------
T ss_pred CceEEEEEcCCCCCCCCCcccCCCCCCccEEEEcC-CCcccEEEECCCCCEEEEEcCCCCC-----------CC----C-
Confidence 236899999876210 1223333222 2389999998 79999999764210 00 0
Q ss_pred chhhcccCCCCCCceEEEEEeCCCCe-----------------EEEEEECCCCCcccceeEEEEeCCEEEEeecCCCeEE
Q 018474 279 GLISLLLPMGSDAGARVVKVDGNDGK-----------------IIRDFNDPDATYISFVTSAAEFDGNLYLASLQSNFIG 341 (355)
Q Consensus 279 ~~~~~~~~~~~~~~~~v~~~~~~~g~-----------------~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~~~i~ 341 (355)
+...|.++.+ .+. ....+ . . ...+++++..+|+||+++..+.+|.
T Consensus 230 ------------~~dei~~i~~-G~nyGwp~~~g~~~~~~~~~p~~~~-~-~---~~ap~G~~~~~G~l~v~~~~~~~v~ 291 (352)
T 2ism_A 230 ------------GHDEVNLIVP-GGNYGWPRVVGRGNDPRYRDPLYFW-P-Q---GFPPGNLAFFRGDLYVAGLRGQALL 291 (352)
T ss_dssp ------------CCCEEEEECT-TCBCCTTTCCSCCCCTTSCCCSEEC-T-T---CCCEEEEEEETTEEEEEETTTTEEE
T ss_pred ------------CCeEEEEecc-CCcCCCCcccCCCCCCCCcCCeEec-C-C---CCCCcceEEECCEEEEEECCCCEEE
Confidence 0012333333 210 01111 1 0 1245567778899999999999999
Q ss_pred EeeCCCC
Q 018474 342 ILPLDGP 348 (355)
Q Consensus 342 ~~~~~~~ 348 (355)
++++++.
T Consensus 292 ~v~~~~~ 298 (352)
T 2ism_A 292 RLVLEGE 298 (352)
T ss_dssp EEEEEEE
T ss_pred EEEECCC
Confidence 9988654
No 87
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=99.41 E-value=2.6e-11 Score=111.89 Aligned_cols=161 Identities=13% Similarity=0.185 Sum_probs=107.5
Q ss_pred eEecCCCCCCCceEEEeeCCCe-EEEEecCCEEEEEEcCCCeeE-Eee-------ccCCCcccCeEECC----CCCEEEE
Q 018474 44 TKLGEGCVNHPEDVSVVVSKGA-LYTATRDGWVKYFILHNETLV-NWK-------HIDSQSLLGLTTTK----DGGVILC 110 (355)
Q Consensus 44 ~~~~~~~~~~p~~i~~d~~~g~-l~~~~~~g~i~~~~~~~g~~~-~~~-------~~~~~p~~gl~~d~----~g~L~v~ 110 (355)
+.+..+ +..|.+|+++ .+|. +|++...|+|+++++ +++.. .+. ...+.+. +|++++ ++.||++
T Consensus 11 ~~va~~-l~~P~~i~~~-pdG~~l~V~e~~G~i~~~~~-~g~~~~~~~~~~~v~~~g~~g~~-gia~~pdf~~~g~lYv~ 86 (353)
T 2g8s_A 11 EVLQDK-LDHPWALAFL-PDNHGMLITLRGGELRHWQA-GKGLSAPLSGVPDVWAHGQGGLL-DVVLAPDFAQSRRIWLS 86 (353)
T ss_dssp EEEEEE-ESSEEEEEEC-STTCCEEEEETTTEEEEEET-TTEECCCCBSCCCCCCSTTCSEE-EEEECTTHHHHCEEEEE
T ss_pred EEEECC-CCCcEEEEEc-CCCCEEEEEeCCceEEEEeC-CCceeeEecCCcccccCCCCCce-eEEECCCCCCCCEEEEE
Confidence 445443 7899999999 5667 999998999999987 55432 121 1123467 999998 5899998
Q ss_pred eCC--------CcEEEEc-C-C-C----eEEEcCC-------cCCcccEEEccCCcEEEEeCCCCCCCccccccccccCC
Q 018474 111 DNE--------KGLLKVT-E-E-G----VEAIVPD-------ASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKP 168 (355)
Q Consensus 111 ~~~--------~gl~~~~-~-~-g----~~~~~~~-------~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~ 168 (355)
... ..|.++. . . + .+.+... ...+++|++++||.||++...... ...... ....
T Consensus 87 ~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~--~~~~q~--~~~~ 162 (353)
T 2g8s_A 87 YSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQ--RPTAQD--LDKL 162 (353)
T ss_dssp EEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTC--GGGGGC--TTSC
T ss_pred EeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCC--CCccCC--CCCC
Confidence 643 2477775 2 2 2 2222111 145789999999999999754211 000001 1133
Q ss_pred CCeEEEEeCCCC-------------eEEEeeccccccccEEEeCCCCEEEEEeCCCC
Q 018474 169 YGQLRKYDPKLK-------------ETTVLHEGFYFANGIALSKNEDFVVVCESWKF 212 (355)
Q Consensus 169 ~g~l~~~dp~~~-------------~~~~~~~~~~~pngi~~~~dg~~l~v~~~~~~ 212 (355)
.|.++|+|+++. ..+.+..++..|.|++++++...||+++...+
T Consensus 163 ~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~~ 219 (353)
T 2g8s_A 163 QGKLVRLTDQGEIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGPR 219 (353)
T ss_dssp TTEEEEEETTSCCCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECSB
T ss_pred CeEEEEECCCCCCCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCCC
Confidence 578999999754 34456678889999999995446999998643
No 88
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.40 E-value=4.5e-11 Score=110.37 Aligned_cols=200 Identities=12% Similarity=0.066 Sum_probs=123.5
Q ss_pred CCCCceEEEeeC---CCeEEEEecC--------CEEEEEEcCCC--e---eEEe----ecc-CCCcccCeEECCCCCEEE
Q 018474 51 VNHPEDVSVVVS---KGALYTATRD--------GWVKYFILHNE--T---LVNW----KHI-DSQSLLGLTTTKDGGVIL 109 (355)
Q Consensus 51 ~~~p~~i~~d~~---~g~l~~~~~~--------g~i~~~~~~~g--~---~~~~----~~~-~~~p~~gl~~d~~g~L~v 109 (355)
..+|.+|+++++ ++.||++... ++|.+++...+ + .+.+ ... ...+. +|+++++|.||+
T Consensus 72 ~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~-~l~~~pDG~Lyv 150 (354)
T 3a9g_A 72 EAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGG-RIRFGPDGMLYI 150 (354)
T ss_dssp TCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCC-CEEECTTSCEEE
T ss_pred CCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCc-eEEECCCCcEEE
Confidence 367999999965 6899997653 68999998544 1 2222 111 13477 899999999999
Q ss_pred EeCC--------------CcEEEEcCCC-e---------EEEcCCcCCcccEEEcc-CCcEEEEeCCCCCCCcccccccc
Q 018474 110 CDNE--------------KGLLKVTEEG-V---------EAIVPDASFTNDVIAAS-DGTLYFTVASTKYTPTDFYKDMA 164 (355)
Q Consensus 110 ~~~~--------------~gl~~~~~~g-~---------~~~~~~~~~~~~l~~d~-dG~ly~~d~~~~~~~~~~~~~~~ 164 (355)
+... +.|+|++++| + +.++.....|+++++|+ +|+||+++...... +....+.
T Consensus 151 t~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~--dei~~i~ 228 (354)
T 3a9g_A 151 TTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPNSPIWSYGHRNPQGIDWHRASGVMVATEHGPVGH--DEVNIIL 228 (354)
T ss_dssp ECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTTCCEEEECCSCCCEEEECTTTCCEEEEECCSSSC--CEEEEEC
T ss_pred EECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCCCcEEEEccCCcceEEEeCCCCCEEEEecCCCCC--cEEEEec
Confidence 8632 2588988655 2 34444447899999999 78999999763210 0011111
Q ss_pred ccCCCCeEEEE-e-CCCCeEEEe--e-ccccccccEEEe-------CCCCEEEEEeCCCCeEEEEEeCCC-CCcceeEec
Q 018474 165 EGKPYGQLRKY-D-PKLKETTVL--H-EGFYFANGIALS-------KNEDFVVVCESWKFRCRRYWLKGD-RAGILDAFI 231 (355)
Q Consensus 165 ~~~~~g~l~~~-d-p~~~~~~~~--~-~~~~~pngi~~~-------~dg~~l~v~~~~~~~i~~~~~~~~-~~~~~~~~~ 231 (355)
.+...|.-++. + ...+....+ . .....|.|+++. .+| .+|+++...++|+++++++. .....+.+.
T Consensus 229 ~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~~~y~g~~fp~~~G-~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~ 307 (354)
T 3a9g_A 229 KGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGASFVHGDMFPGLRG-WLLIACLRGSMLAAVNFGDNMEVRKISTFF 307 (354)
T ss_dssp TTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEEEECCSSSCGGGTT-EEEEEETTTTEEEEEEECGGGCEEEEEEEC
T ss_pred CCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcceEEECCCCCcccCC-cEEEEEcCCCEEEEEEECCCCcccceeeec
Confidence 11100000000 0 000000000 0 123458889984 466 59999999999999999753 222233444
Q ss_pred ccCCCCcCceEECCCCCEEEEee
Q 018474 232 ENLPGGPDNINLAPDGSFWIGLI 254 (355)
Q Consensus 232 ~~~~g~p~~i~~d~~G~lwv~~~ 254 (355)
....+.|.++++++||.|||++.
T Consensus 308 ~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 308 KNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp TTTSCCEEEEEECTTSCEEEEEC
T ss_pred cCCCCCeeEEEECCCCcEEEEEe
Confidence 33345689999999999999986
No 89
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.37 E-value=5.1e-11 Score=104.86 Aligned_cols=187 Identities=14% Similarity=0.069 Sum_probs=128.4
Q ss_pred ceEecCCCCCCCceEEEeeCCCeEEEEec---CCEEEEEEcCCCeeEEeeccCC--CcccCeEECCCCCEEEEeCCCc-E
Q 018474 43 LTKLGEGCVNHPEDVSVVVSKGALYTATR---DGWVKYFILHNETLVNWKHIDS--QSLLGLTTTKDGGVILCDNEKG-L 116 (355)
Q Consensus 43 ~~~~~~~~~~~p~~i~~d~~~g~l~~~~~---~g~i~~~~~~~g~~~~~~~~~~--~p~~gl~~d~~g~L~v~~~~~g-l 116 (355)
...++.+....|++++++ .++.||+++. ++.|..+|+++++...-..... .+. |++++ .++||++++..+ +
T Consensus 12 v~~~p~~~~~f~~Gl~~~-~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fge-Gi~~~-g~~lyv~t~~~~~v 88 (266)
T 2iwa_A 12 LNEFPHDPYAFTQGLVYA-ENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGE-GLTLL-NEKLYQVVWLKNIG 88 (266)
T ss_dssp EEEEECCTTCCEEEEEEC-STTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEE-EEEEE-TTEEEEEETTCSEE
T ss_pred EEEEECCCCCCcccEEEe-CCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceE-EEEEe-CCEEEEEEecCCEE
Confidence 456666655568999999 4579999874 4799999999998765443333 445 67776 468999998754 7
Q ss_pred EEEcC-CC--eEEEcCCcCCcccEEEccCC-cEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeec-----
Q 018474 117 LKVTE-EG--VEAIVPDASFTNDVIAASDG-TLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHE----- 187 (355)
Q Consensus 117 ~~~~~-~g--~~~~~~~~~~~~~l~~d~dG-~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~----- 187 (355)
+.+|. +. +..+... .+.+..+.+|| ++|+++. .+.++.+||++.+......
T Consensus 89 ~viD~~t~~v~~~i~~g--~~~g~glt~Dg~~l~vs~g------------------s~~l~viD~~t~~v~~~I~Vg~~~ 148 (266)
T 2iwa_A 89 FIYDRRTLSNIKNFTHQ--MKDGWGLATDGKILYGSDG------------------TSILYEIDPHTFKLIKKHNVKYNG 148 (266)
T ss_dssp EEEETTTTEEEEEEECC--SSSCCEEEECSSSEEEECS------------------SSEEEEECTTTCCEEEEEECEETT
T ss_pred EEEECCCCcEEEEEECC--CCCeEEEEECCCEEEEECC------------------CCeEEEEECCCCcEEEEEEECCCC
Confidence 78884 55 5555432 35556666676 7999863 4589999999876543321
Q ss_pred -cccccccEEEeCCCCEEEEEeCCCCeEEEEEeCCCCC-cceeEeccc--------CC--CCcCceEECCCC-CEEEEee
Q 018474 188 -GFYFANGIALSKNEDFVVVCESWKFRCRRYWLKGDRA-GILDAFIEN--------LP--GGPDNINLAPDG-SFWIGLI 254 (355)
Q Consensus 188 -~~~~pngi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~-~~~~~~~~~--------~~--g~p~~i~~d~~G-~lwv~~~ 254 (355)
....+|++.+. || .+|++....+.|.++|++..+. +... +... .+ ..|.|+++|++| ++||+..
T Consensus 149 ~p~~~~nele~~-dg-~lyvn~~~~~~V~vID~~tg~V~~~I~-~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk 225 (266)
T 2iwa_A 149 HRVIRLNELEYI-NG-EVWANIWQTDCIARISAKDGTLLGWIL-LPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGK 225 (266)
T ss_dssp EECCCEEEEEEE-TT-EEEEEETTSSEEEEEETTTCCEEEEEE-CHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEET
T ss_pred cccccceeEEEE-CC-EEEEecCCCCeEEEEECCCCcEEEEEE-CCCcccccccccccccCceEEEEEcCCCCEEEEECC
Confidence 12368899988 77 5999988889999999865432 1211 1100 01 246899999988 5888774
Q ss_pred c
Q 018474 255 K 255 (355)
Q Consensus 255 ~ 255 (355)
.
T Consensus 226 ~ 226 (266)
T 2iwa_A 226 L 226 (266)
T ss_dssp T
T ss_pred C
Confidence 4
No 90
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.36 E-value=4.9e-10 Score=99.71 Aligned_cols=220 Identities=12% Similarity=0.109 Sum_probs=146.8
Q ss_pred CCCceEEEeeCCCeEEEEecCCEEEEEEcCCCeeE-Eeecc-CCCcccCeEECCCCCEEEEeCC-C-cEEEEcCCC--eE
Q 018474 52 NHPEDVSVVVSKGALYTATRDGWVKYFILHNETLV-NWKHI-DSQSLLGLTTTKDGGVILCDNE-K-GLLKVTEEG--VE 125 (355)
Q Consensus 52 ~~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~-~~~~~-~~~p~~gl~~d~~g~L~v~~~~-~-gl~~~~~~g--~~ 125 (355)
..+.++++. .+|.+++ +.+++|+.+|+ +|+.. ++... ...+. +....++|++++++.. . .++.++++| +.
T Consensus 37 ~~~~~~~~~-pdG~ilv-s~~~~V~~~d~-~G~~~W~~~~~~~~~~~-~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~ 112 (276)
T 3no2_A 37 WECNSVAAT-KAGEILF-SYSKGAKMITR-DGRELWNIAAPAGCEMQ-TARILPDGNALVAWCGHPSTILEVNMKGEVLS 112 (276)
T ss_dssp CCCCEEEEC-TTSCEEE-ECBSEEEEECT-TSCEEEEEECCTTCEEE-EEEECTTSCEEEEEESTTEEEEEECTTSCEEE
T ss_pred CCCcCeEEC-CCCCEEE-eCCCCEEEECC-CCCEEEEEcCCCCcccc-ccEECCCCCEEEEecCCCCEEEEEeCCCCEEE
Confidence 468999999 5667777 55788999999 77643 22221 12455 6778899999998765 3 477788777 44
Q ss_pred EEcC--C----cCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeeccccccccEEEeC
Q 018474 126 AIVP--D----ASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYFANGIALSK 199 (355)
Q Consensus 126 ~~~~--~----~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~~~~pngi~~~~ 199 (355)
.+.. . ...++.+.++++|++++++.. .+.++.||++ |+...-......|.+++..+
T Consensus 113 ~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~-----------------~~~v~~~d~~-G~~~w~~~~~~~~~~~~~~~ 174 (276)
T 3no2_A 113 KTEFETGIERPHAQFRQINKNKKGNYLVPLFA-----------------TSEVREIAPN-GQLLNSVKLSGTPFSSAFLD 174 (276)
T ss_dssp EEEECCSCSSGGGSCSCCEECTTSCEEEEETT-----------------TTEEEEECTT-SCEEEEEECSSCCCEEEECT
T ss_pred EEeccCCCCcccccccCceECCCCCEEEEecC-----------------CCEEEEECCC-CCEEEEEECCCCccceeEcC
Confidence 3321 1 145677889999999998765 5689999998 66544333335688889999
Q ss_pred CCCEEEEEeCCCCeEEEEEeC-CCCCcceeEecccCC----CCcCceEECCCCCEEEEeecCCchhhHhhhcchhHHHHH
Q 018474 200 NEDFVVVCESWKFRCRRYWLK-GDRAGILDAFIENLP----GGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELL 274 (355)
Q Consensus 200 dg~~l~v~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~----g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~ 274 (355)
+|+ +++++...++|..++.+ |....++. ....+ ..|.++..+++|+++|+..++...--
T Consensus 175 ~g~-~~v~~~~~~~v~~~d~~tG~~~w~~~--~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g~~~~~------------- 238 (276)
T 3no2_A 175 NGD-CLVACGDAHCFVQLNLESNRIVRRVN--ANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDREA------------- 238 (276)
T ss_dssp TSC-EEEECBTTSEEEEECTTTCCEEEEEE--GGGSBSCCCSEEEEEEECTTSCEEEEEECTTCTTG-------------
T ss_pred CCC-EEEEeCCCCeEEEEeCcCCcEEEEec--CCCCCCccccccccceEcCCCCEEEEeccCccccc-------------
Confidence 998 67777777899999986 43222221 11112 23678889999999999975321000
Q ss_pred HhccchhhcccCCCCCCceEEEEEeCCCCeEEEEEECCCCCcccceeEEEE
Q 018474 275 DAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAE 325 (355)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~ 325 (355)
.......++++++ +|+++=.|..... +..+++++.
T Consensus 239 -------------~~~~~~~~~~~~~-~g~~~W~~~~~~~--~~~~~~~~~ 273 (276)
T 3no2_A 239 -------------GKGKHPQLVEIDS-EGKVVWQLNDKVK--FGMISTICP 273 (276)
T ss_dssp -------------GGSCCCSEEEECT-TSBEEEEECCTTT--SCCCCEEEE
T ss_pred -------------cccCCceEEEECC-CCCEEEEecCccc--ccceeeeee
Confidence 0001246999999 9999888866443 556666553
No 91
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.35 E-value=2e-09 Score=99.68 Aligned_cols=219 Identities=13% Similarity=0.177 Sum_probs=150.2
Q ss_pred eEEE-EecCCEEEEEEcCCCeeEEeeccCCCcccCeEECCCCC-EEEEeCC-CcEEEEc-CCC--eEEEcCCcCCcccEE
Q 018474 65 ALYT-ATRDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGG-VILCDNE-KGLLKVT-EEG--VEAIVPDASFTNDVI 138 (355)
Q Consensus 65 ~l~~-~~~~g~i~~~~~~~g~~~~~~~~~~~p~~gl~~d~~g~-L~v~~~~-~gl~~~~-~~g--~~~~~~~~~~~~~l~ 138 (355)
.+|+ +..++.|..+|..+++..........+. +++++++|+ ||++... +.+..++ .++ ...+... ..+++++
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~-~~v~~~~ 80 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVGSNPM-GAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAG-SSPQGVA 80 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSSSEE-EEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECS-SSEEEEE
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecCCCcc-eEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECC-CCccceE
Confidence 4555 4568999999998887765544455688 999999997 5666544 4466667 466 3444333 4789999
Q ss_pred EccCCc-EEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeeccccccccEEEeCCCCEEEEEeCCCCeEEEE
Q 018474 139 AASDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYFANGIALSKNEDFVVVCESWKFRCRRY 217 (355)
Q Consensus 139 ~d~dG~-ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~~~~pngi~~~~dg~~l~v~~~~~~~i~~~ 217 (355)
++++|+ ||++... .+.++.||.++++..........+.++++++|++.+|++....+.|..+
T Consensus 81 ~spdg~~l~~~~~~-----------------~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~ 143 (391)
T 1l0q_A 81 VSPDGKQVYVTNMA-----------------SSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVI 143 (391)
T ss_dssp ECTTSSEEEEEETT-----------------TTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred ECCCCCEEEEEECC-----------------CCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEE
Confidence 999985 7777543 4679999999887765555555678999999999999998888999999
Q ss_pred EeCCCCCcceeEecccCCCCcCceEECCCCC-EEEEeecCCchhhHhhhcchhHHHHHHhccchhhcccCCCCCCceEEE
Q 018474 218 WLKGDRAGILDAFIENLPGGPDNINLAPDGS-FWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVV 296 (355)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~-lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 296 (355)
+++..+. ...+. ....+..+.++++|+ +|++.... +.|.
T Consensus 144 d~~~~~~--~~~~~--~~~~~~~~~~~~dg~~l~~~~~~~------------------------------------~~v~ 183 (391)
T 1l0q_A 144 NTVTKAV--INTVS--VGRSPKGIAVTPDGTKVYVANFDS------------------------------------MSIS 183 (391)
T ss_dssp ETTTTEE--EEEEE--CCSSEEEEEECTTSSEEEEEETTT------------------------------------TEEE
T ss_pred ECCCCcE--EEEEe--cCCCcceEEECCCCCEEEEEeCCC------------------------------------CEEE
Confidence 9854321 11221 223467788999996 55665331 3578
Q ss_pred EEeCCCCeEEEEEECCCCCcccceeEEEEe--CCEEEEeec--CCCeEEEeeCCC
Q 018474 297 KVDGNDGKIIRDFNDPDATYISFVTSAAEF--DGNLYLASL--QSNFIGILPLDG 347 (355)
Q Consensus 297 ~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~--~g~L~v~~~--~~~~i~~~~~~~ 347 (355)
.+|..+++....+.... .+..+... +..||+++. ..+.|..+++.+
T Consensus 184 ~~d~~~~~~~~~~~~~~-----~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~ 233 (391)
T 1l0q_A 184 VIDTVTNSVIDTVKVEA-----APSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGT 233 (391)
T ss_dssp EEETTTTEEEEEEECSS-----EEEEEEECTTSSEEEEEEECSSCCEEEEEETTT
T ss_pred EEECCCCeEEEEEecCC-----CccceEECCCCCEEEEEecCcCCCcEEEEECCC
Confidence 88875666666664322 23444443 357888775 577888887764
No 92
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.35 E-value=1.4e-09 Score=106.05 Aligned_cols=232 Identities=10% Similarity=-0.024 Sum_probs=156.0
Q ss_pred EEeeCCCeEEEEec-CCEEEEEEcCCCeeEEeeccCCCcccCeEECCCCC-EEEEeCCCcEEEEcC---CC--eEEEcCC
Q 018474 58 SVVVSKGALYTATR-DGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGG-VILCDNEKGLLKVTE---EG--VEAIVPD 130 (355)
Q Consensus 58 ~~d~~~g~l~~~~~-~g~i~~~~~~~g~~~~~~~~~~~p~~gl~~d~~g~-L~v~~~~~gl~~~~~---~g--~~~~~~~ 130 (355)
+++ .++.+|++.. ++.|..+|..+++.......+..++ +++++++|+ ||+++..+.+..++. ++ +..+...
T Consensus 144 ~~~-p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~~~-~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g 221 (543)
T 1nir_A 144 DLD-LPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYAVH-ISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIG 221 (543)
T ss_dssp CCC-GGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTTEE-EEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECC
T ss_pred ccC-CCCEEEEEEcCCCeEEEEECCCceEEEEEecCcccc-eEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecC
Confidence 367 4667887654 7899999998887655444444588 999999986 788886655777774 34 3344332
Q ss_pred cCCcccEEEcc----CC-cEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeecc------------ccccc
Q 018474 131 ASFTNDVIAAS----DG-TLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEG------------FYFAN 193 (355)
Q Consensus 131 ~~~~~~l~~d~----dG-~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~------------~~~pn 193 (355)
..|.++++++ || .+|+++.. .+.+..||..+++....... ...+.
T Consensus 222 -~~p~~va~sp~~~~dg~~l~v~~~~-----------------~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~ 283 (543)
T 1nir_A 222 -IEARSVESSKFKGYEDRYTIAGAYW-----------------PPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVA 283 (543)
T ss_dssp -SEEEEEEECCSTTCTTTEEEEEEEE-----------------SSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEE
T ss_pred -CCcceEEeCCCcCCCCCEEEEEEcc-----------------CCeEEEEeccccccceeecccCcccCccccccCCceE
Confidence 6799999999 98 57777532 34677888877765433221 11356
Q ss_pred cEEEeCCCCEEEEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCCE-EEEeecCCchhhHhhhcchhHHH
Q 018474 194 GIALSKNEDFVVVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSF-WIGLIKMNQTGVRAIQKCREKWE 272 (355)
Q Consensus 194 gi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~l-wv~~~~~~~~~~~~~~~~~~~~~ 272 (355)
+++++++++.+|++....+.|+.++.+..+.-....+ .....|.++.+|++|++ +++....
T Consensus 284 ~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i--~~~~~~~~~~~spdg~~l~va~~~~---------------- 345 (543)
T 1nir_A 284 AIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSI--GAAPFLHDGGWDSSHRYFMTAANNS---------------- 345 (543)
T ss_dssp EEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEE--ECCSSCCCEEECTTSCEEEEEEGGG----------------
T ss_pred EEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEe--ccCcCccCceECCCCCEEEEEecCC----------------
Confidence 7999999999999998899999999865332121122 22346889999999985 5554331
Q ss_pred HHHhccchhhcccCCCCCCceEEEEEeCCCCeEEEEEECCCCCcccceeEEEE-eCCEEEEee-cCCCeEEEeeCCC
Q 018474 273 LLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAE-FDGNLYLAS-LQSNFIGILPLDG 347 (355)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~-~~~~~i~~~~~~~ 347 (355)
+.|..+|.++|+....+.............+.. +++.+|+++ ...+.|.++++++
T Consensus 346 --------------------~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~ 402 (543)
T 1nir_A 346 --------------------NKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDP 402 (543)
T ss_dssp --------------------TEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred --------------------CeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEeccCCCceEEEEEeCC
Confidence 357779987888888776422111111222222 248899986 4678999999876
No 93
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.34 E-value=1.8e-09 Score=101.35 Aligned_cols=251 Identities=15% Similarity=0.119 Sum_probs=162.3
Q ss_pred CCceEEEeeCCCeEEE-EecCCEEEEEEcCCCeeEE-eeccCCCcccCeEECCCCC-EEEEeCC-CcEEEEc-CCC--eE
Q 018474 53 HPEDVSVVVSKGALYT-ATRDGWVKYFILHNETLVN-WKHIDSQSLLGLTTTKDGG-VILCDNE-KGLLKVT-EEG--VE 125 (355)
Q Consensus 53 ~p~~i~~d~~~g~l~~-~~~~g~i~~~~~~~g~~~~-~~~~~~~p~~gl~~d~~g~-L~v~~~~-~gl~~~~-~~g--~~ 125 (355)
...++++. .++.+|+ +..++.|..+|.++++... +......+. +++++++|+ +|++... +.+..++ .++ +.
T Consensus 171 ~v~~~~~~-~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~ 248 (433)
T 3bws_A 171 FVETISIP-EHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSK-ILLYDPIRDLVYCSNWISEDISVIDRKTKLEIR 248 (433)
T ss_dssp EEEEEEEG-GGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEE-EEEEETTTTEEEEEETTTTEEEEEETTTTEEEE
T ss_pred ceeEEEEc-CCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCee-EEEEcCCCCEEEEEecCCCcEEEEECCCCcEEE
Confidence 44568887 4556655 5567999999998776543 333345677 899998886 5566644 4477777 466 33
Q ss_pred EEcCCcCCcccEEEccCC-cEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeeccccccccEEEeCCCCEE
Q 018474 126 AIVPDASFTNDVIAASDG-TLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYFANGIALSKNEDFV 204 (355)
Q Consensus 126 ~~~~~~~~~~~l~~d~dG-~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~~~~pngi~~~~dg~~l 204 (355)
.+.. ...+.+++++++| .+|++...... + ....+.++.||+.+++..........+.+++++|+++.+
T Consensus 249 ~~~~-~~~~~~~~~~~~g~~l~~~~~~~~~--------~--~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l 317 (433)
T 3bws_A 249 KTDK-IGLPRGLLLSKDGKELYIAQFSASN--------Q--ESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKI 317 (433)
T ss_dssp ECCC-CSEEEEEEECTTSSEEEEEEEESCT--------T--CSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEE
T ss_pred EecC-CCCceEEEEcCCCCEEEEEECCCCc--------c--ccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEE
Confidence 3332 2568899999999 56666432100 0 012568999999888765444333467889999999999
Q ss_pred EEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCC-EEEEeecCCchhhHhhhcchhHHHHHHhccchhhc
Q 018474 205 VVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGS-FWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISL 283 (355)
Q Consensus 205 ~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~-lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (355)
|++....+.|..|++++.+. ...+ .....+..++++++|+ +|++..........+
T Consensus 318 ~~~~~~~~~v~v~d~~~~~~--~~~~--~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~-------------------- 373 (433)
T 3bws_A 318 YVSDMCCSKIEVYDLKEKKV--QKSI--PVFDKPNTIALSPDGKYLYVSCRGPNHPTEGY-------------------- 373 (433)
T ss_dssp EEEETTTTEEEEEETTTTEE--EEEE--ECSSSEEEEEECTTSSEEEEEECCCCCTTTCT--------------------
T ss_pred EEEecCCCEEEEEECCCCcE--EEEe--cCCCCCCeEEEcCCCCEEEEEecCCCcccccc--------------------
Confidence 99988889999999864321 1222 1233477899999997 666664421100000
Q ss_pred ccCCCCCCceEEEEEeCCCCeEEEEEECCCCCcccceeEEEEe--CCEEEEeecCCCeEEEeeCCC
Q 018474 284 LLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF--DGNLYLASLQSNFIGILPLDG 347 (355)
Q Consensus 284 ~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~--~g~L~v~~~~~~~i~~~~~~~ 347 (355)
-+.+...+.|..+|.++++....+.... .+..+... +..|++++...+.|..+++++
T Consensus 374 --~~~g~~dg~v~~~d~~~~~~~~~~~~~~-----~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 374 --LKKGLVLGKVYVIDTTTDTVKEFWEAGN-----QPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp --TSCCSSCCEEEEEETTTTEEEEEEECSS-----SEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred --ccccccceEEEEEECCCCcEEEEecCCC-----CCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 0012334679999986888887776522 34555553 457888887788999888764
No 94
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.33 E-value=4.5e-10 Score=105.52 Aligned_cols=232 Identities=11% Similarity=0.089 Sum_probs=157.3
Q ss_pred CCCceEEEeeCCCeEEEEec-CCEEEEEEcCCCeeEEeecc------CCCcccCeEECCCCCEEEEeCCC-cEEEEc-CC
Q 018474 52 NHPEDVSVVVSKGALYTATR-DGWVKYFILHNETLVNWKHI------DSQSLLGLTTTKDGGVILCDNEK-GLLKVT-EE 122 (355)
Q Consensus 52 ~~p~~i~~d~~~g~l~~~~~-~g~i~~~~~~~g~~~~~~~~------~~~p~~gl~~d~~g~L~v~~~~~-gl~~~~-~~ 122 (355)
..|.++++++ ++.++++.. ++.|..+|..+++....... ...+. +++++++|++|++.... .+..++ .+
T Consensus 123 ~~~~~~~~s~-~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~s~~~d~~v~~~d~~~ 200 (433)
T 3bws_A 123 FQPKSVRFID-NTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVE-TISIPEHNELWVSQMQANAVHVFDLKT 200 (433)
T ss_dssp SCBCCCEESS-SSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEE-EEEEGGGTEEEEEEGGGTEEEEEETTT
T ss_pred CCceEEEEeC-CCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCcee-EEEEcCCCEEEEEECCCCEEEEEECCC
Confidence 4577999995 777777654 67799999988876653221 12456 78898899999887664 466667 45
Q ss_pred C--eEEEcCCcCCcccEEEccCCc-EEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeeccccccccEEEeC
Q 018474 123 G--VEAIVPDASFTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYFANGIALSK 199 (355)
Q Consensus 123 g--~~~~~~~~~~~~~l~~d~dG~-ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~~~~pngi~~~~ 199 (355)
+ ...+......+.+++++++|. +|++... .+.+..||.++++..........+.+++++|
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----------------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~ 263 (433)
T 3bws_A 201 LAYKATVDLTGKWSKILLYDPIRDLVYCSNWI-----------------SEDISVIDRKTKLEIRKTDKIGLPRGLLLSK 263 (433)
T ss_dssp CCEEEEEECSSSSEEEEEEETTTTEEEEEETT-----------------TTEEEEEETTTTEEEEECCCCSEEEEEEECT
T ss_pred ceEEEEEcCCCCCeeEEEEcCCCCEEEEEecC-----------------CCcEEEEECCCCcEEEEecCCCCceEEEEcC
Confidence 5 444544346789999999985 6666543 4679999998887655444445688999999
Q ss_pred CCCEEEEEeC-------CCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCC-EEEEeecCCchhhHhhhcchhHH
Q 018474 200 NEDFVVVCES-------WKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGS-FWIGLIKMNQTGVRAIQKCREKW 271 (355)
Q Consensus 200 dg~~l~v~~~-------~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~-lwv~~~~~~~~~~~~~~~~~~~~ 271 (355)
|++.++++.. ..+.|..|+++..+. ...+ ..++.+..+.++++|+ +|++....
T Consensus 264 ~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~--~~~~--~~~~~~~~~~~~~~g~~l~~~~~~~--------------- 324 (433)
T 3bws_A 264 DGKELYIAQFSASNQESGGGRLGIYSMDKEKL--IDTI--GPPGNKRHIVSGNTENKIYVSDMCC--------------- 324 (433)
T ss_dssp TSSEEEEEEEESCTTCSCCEEEEEEETTTTEE--EEEE--EEEECEEEEEECSSTTEEEEEETTT---------------
T ss_pred CCCEEEEEECCCCccccCCCeEEEEECCCCcE--Eeec--cCCCCcceEEECCCCCEEEEEecCC---------------
Confidence 9998888874 345788999854321 1111 1223467789999996 67765431
Q ss_pred HHHHhccchhhcccCCCCCCceEEEEEeCCCCeEEEEEECCCCCcccceeEEEEe--CCEEEEeecCCC-----------
Q 018474 272 ELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF--DGNLYLASLQSN----------- 338 (355)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~--~g~L~v~~~~~~----------- 338 (355)
+.|..+|.++++....+.... .+..+... +..||+++...+
T Consensus 325 ---------------------~~v~v~d~~~~~~~~~~~~~~-----~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~ 378 (433)
T 3bws_A 325 ---------------------SKIEVYDLKEKKVQKSIPVFD-----KPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGL 378 (433)
T ss_dssp ---------------------TEEEEEETTTTEEEEEEECSS-----SEEEEEECTTSSEEEEEECCCCCTTTCTTSCCS
T ss_pred ---------------------CEEEEEECCCCcEEEEecCCC-----CCCeEEEcCCCCEEEEEecCCCccccccccccc
Confidence 468888885677776665322 24445544 356888876543
Q ss_pred ---eEEEeeCCC
Q 018474 339 ---FIGILPLDG 347 (355)
Q Consensus 339 ---~i~~~~~~~ 347 (355)
.|.++++.+
T Consensus 379 ~dg~v~~~d~~~ 390 (433)
T 3bws_A 379 VLGKVYVIDTTT 390 (433)
T ss_dssp SCCEEEEEETTT
T ss_pred cceEEEEEECCC
Confidence 788887754
No 95
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.31 E-value=8.5e-10 Score=107.69 Aligned_cols=238 Identities=13% Similarity=0.117 Sum_probs=156.8
Q ss_pred CCceEEEeeCCCeEEEEecCCEEEEEEc--CCCeeEEeeccCCCcccCeEECC----CCC-EEEEeCC-CcEEEEc-CCC
Q 018474 53 HPEDVSVVVSKGALYTATRDGWVKYFIL--HNETLVNWKHIDSQSLLGLTTTK----DGG-VILCDNE-KGLLKVT-EEG 123 (355)
Q Consensus 53 ~p~~i~~d~~~g~l~~~~~~g~i~~~~~--~~g~~~~~~~~~~~p~~gl~~d~----~g~-L~v~~~~-~gl~~~~-~~g 123 (355)
.|.+++++++++.+|+++.++.|..+|. .+++...-...+..|. ++++++ +|+ ||++... +.+..+| .++
T Consensus 180 ~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~~p~-~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~ 258 (543)
T 1nir_A 180 AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEAR-SVESSKFKGYEDRYTIAGAYWPPQFAIMDGETL 258 (543)
T ss_dssp TEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEE-EEEECCSTTCTTTEEEEEEEESSEEEEEETTTC
T ss_pred ccceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecCCCcc-eEEeCCCcCCCCCEEEEEEccCCeEEEEecccc
Confidence 4889999988889999999999999999 7776554444566788 999998 886 7887743 4566667 455
Q ss_pred --eEEEcCC-----------cCCcccEEEccCC-cEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeE---EEee
Q 018474 124 --VEAIVPD-----------ASFTNDVIAASDG-TLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKET---TVLH 186 (355)
Q Consensus 124 --~~~~~~~-----------~~~~~~l~~d~dG-~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~---~~~~ 186 (355)
++.+... ...+.++++++++ .+|++... .+.+..+|..+.+. ..+
T Consensus 259 ~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~-----------------~g~i~vvd~~~~~~l~~~~i- 320 (543)
T 1nir_A 259 EPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKE-----------------TGKVLLVNYKDIDNLTVTSI- 320 (543)
T ss_dssp CEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETT-----------------TTEEEEEECTTSSSCEEEEE-
T ss_pred ccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECC-----------------CCeEEEEEecCCCcceeEEe-
Confidence 5544321 1256788999877 56666433 56788888765432 122
Q ss_pred ccccccccEEEeCCCCEEEEEeCCCCeEEEEEeCCCCCcceeEec-ccCCCCc-CceE-ECCC-CCEEEEeecCCchhhH
Q 018474 187 EGFYFANGIALSKNEDFVVVCESWKFRCRRYWLKGDRAGILDAFI-ENLPGGP-DNIN-LAPD-GSFWIGLIKMNQTGVR 262 (355)
Q Consensus 187 ~~~~~pngi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~g~p-~~i~-~d~~-G~lwv~~~~~~~~~~~ 262 (355)
.....|.+++++|||+++|++....+.|..++.+..+. ...+. ...| .| .+.. .+++ |.+|++...+
T Consensus 321 ~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l--~~~i~~g~~p-h~g~g~~~~~p~~g~~~~s~~~~------ 391 (543)
T 1nir_A 321 GAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRL--SALVDVGKTP-HPGRGANFVHPKYGPVWSTSHLG------ 391 (543)
T ss_dssp ECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEE--EEEEECSSSB-CCTTCEEEEETTTEEEEEEEBSS------
T ss_pred ccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeE--EEeeccCCCC-CCCCCcccCCCCCccEEEeccCC------
Confidence 23457899999999999999988888999999754322 11111 1111 12 2333 3555 7888876421
Q ss_pred hhhcchhHHHHHHhccchhhcccCCCCCCceEEEEEeCCC-------CeEEEEEECCCCCcccceeEEE--EeCCEEEEe
Q 018474 263 AIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGND-------GKIIRDFNDPDATYISFVTSAA--EFDGNLYLA 333 (355)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-------g~~~~~~~~~~g~~~~~~~~~~--~~~g~L~v~ 333 (355)
.+.|..++.+. .+.+..+..+.+. ...+. .++.+||++
T Consensus 392 -----------------------------d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~----~~~v~~~pdg~~l~v~ 438 (543)
T 1nir_A 392 -----------------------------DGSISLIGTDPKNHPQYAWKKVAELQGQGGG----SLFIKTHPKSSHLYVD 438 (543)
T ss_dssp -----------------------------SSEEEEEECCTTTCTTTBTSEEEEEECSCSC----CCCEECCTTCCEEEEC
T ss_pred -----------------------------CceEEEEEeCCCCCchhcCeEEEEEEcCCCC----ceEEEcCCCCCcEEEe
Confidence 12465565533 6888888765432 12233 345889998
Q ss_pred ecC------CCeEEEeeCCCCCCC
Q 018474 334 SLQ------SNFIGILPLDGPEPQ 351 (355)
Q Consensus 334 ~~~------~~~i~~~~~~~~~~~ 351 (355)
+.. ++.|.++++.+....
T Consensus 439 ~~~~~~~~~~~~v~v~d~~~~~~~ 462 (543)
T 1nir_A 439 TTFNPDARISQSVAVFDLKNLDAK 462 (543)
T ss_dssp CTTCSSHHHHTCEEEEETTCTTSC
T ss_pred cCCCCCcccCceEEEEECCCCCCC
Confidence 732 459999998866543
No 96
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.31 E-value=1e-09 Score=95.97 Aligned_cols=188 Identities=10% Similarity=0.106 Sum_probs=127.3
Q ss_pred CCCCCCceEEEeeCCCeEEE-EecCCEEEEEEcCCCeeEEeecc--CCCcccCeEECCCCCEEEEeCC-CcEEEEc--CC
Q 018474 49 GCVNHPEDVSVVVSKGALYT-ATRDGWVKYFILHNETLVNWKHI--DSQSLLGLTTTKDGGVILCDNE-KGLLKVT--EE 122 (355)
Q Consensus 49 ~~~~~p~~i~~d~~~g~l~~-~~~~g~i~~~~~~~g~~~~~~~~--~~~p~~gl~~d~~g~L~v~~~~-~gl~~~~--~~ 122 (355)
|....+.+|+++++++.||+ ...++.|+++|.. |+...-... ...+. ||+.+.+|++||++-. ++++.+. .+
T Consensus 24 g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~E-GIa~~~~g~~~vs~E~~~~l~~~~v~~~ 101 (255)
T 3qqz_A 24 GITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLE-TIEYIGDNQFVISDERDYAIYVISLTPN 101 (255)
T ss_dssp TCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEE-EEEECSTTEEEEEETTTTEEEEEEECTT
T ss_pred CcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChH-HeEEeCCCEEEEEECCCCcEEEEEcCCC
Confidence 44567999999987889997 5668899999995 765443322 24688 9999999999888633 4677665 33
Q ss_pred C-eE---EEcCCc------CCcccEEEccCC-cEEEEeCCCCCCCccccccccccCCCCeEEEEe--CCCCeEEEeec--
Q 018474 123 G-VE---AIVPDA------SFTNDVIAASDG-TLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYD--PKLKETTVLHE-- 187 (355)
Q Consensus 123 g-~~---~~~~~~------~~~~~l~~d~dG-~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~d--p~~~~~~~~~~-- 187 (355)
+ +. ...... ....+|++|+++ +||++.... ...+|.++ +.+..++....
T Consensus 102 ~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~----------------p~~i~~~~g~~~~~~l~i~~~~~ 165 (255)
T 3qqz_A 102 SEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKN----------------PIEVYKVNGLLSSNELHISKDKA 165 (255)
T ss_dssp CCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESS----------------SEEEEEEESTTCSSCCEEEECHH
T ss_pred CeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcC----------------CceEEEEcccccCCceeeecchh
Confidence 3 22 221111 345789999987 899976431 22677777 22223333311
Q ss_pred -----cccccccEEEeCCCCEEEEEeCCCCeEEEEEeCCCCCcceeEecccCC------CCcCceEECCCCCEEEEeec
Q 018474 188 -----GFYFANGIALSKNEDFVVVCESWKFRCRRYWLKGDRAGILDAFIENLP------GGPDNINLAPDGSFWIGLIK 255 (355)
Q Consensus 188 -----~~~~pngi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~------g~p~~i~~d~~G~lwv~~~~ 255 (355)
....+.+++++|....+|+.....+.|..++.+|.-. ....+..... ..|.|+++|++|++||++..
T Consensus 166 ~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~~~-~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~ 243 (255)
T 3qqz_A 166 LQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVI-GEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEP 243 (255)
T ss_dssp HHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCCEE-EEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETT
T ss_pred hccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCCEE-EEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCC
Confidence 1345789999999999999998889999999876422 2222221111 25889999999999999754
No 97
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.30 E-value=1.3e-09 Score=100.04 Aligned_cols=181 Identities=15% Similarity=0.141 Sum_probs=116.8
Q ss_pred CCCceEEEeeCCCeEEEEec-CCEEEEEEcCC-CeeEEe----ecc----------CCCcccCeEECCCCC-EEEEeCCC
Q 018474 52 NHPEDVSVVVSKGALYTATR-DGWVKYFILHN-ETLVNW----KHI----------DSQSLLGLTTTKDGG-VILCDNEK 114 (355)
Q Consensus 52 ~~p~~i~~d~~~g~l~~~~~-~g~i~~~~~~~-g~~~~~----~~~----------~~~p~~gl~~d~~g~-L~v~~~~~ 114 (355)
..|.++++ +++.+|++.. ++.+..++..+ +..... ... ...++ +++++++|+ ||+++...
T Consensus 100 ~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~spdg~~l~~~~~~~ 176 (361)
T 3scy_A 100 ADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLH-CVRITPDGKYLLADDLGT 176 (361)
T ss_dssp SCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEE-EEEECTTSSEEEEEETTT
T ss_pred CCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcce-EEEECCCCCEEEEEeCCC
Confidence 57888888 4778898875 67888888753 332211 111 12346 799999997 88888654
Q ss_pred c-EEEE--cC-CC------e------EEEc-CCcCCcccEEEccCCc-EEEEeCCCCCCCccccccccccCCCCeEEEEe
Q 018474 115 G-LLKV--TE-EG------V------EAIV-PDASFTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYD 176 (355)
Q Consensus 115 g-l~~~--~~-~g------~------~~~~-~~~~~~~~l~~d~dG~-ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~d 176 (355)
+ +..+ +. .+ + .... .....|+++++++||+ +|+++.. .+.+..|+
T Consensus 177 ~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~-----------------~~~v~v~~ 239 (361)
T 3scy_A 177 DQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEI-----------------GGTVIAFR 239 (361)
T ss_dssp TEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETT-----------------TCEEEEEE
T ss_pred CEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCC-----------------CCeEEEEE
Confidence 3 4444 32 21 1 1111 1226789999999995 8887643 34677777
Q ss_pred CCCCeEEEeec------cccccccEEEeCCCCEEEEEeCC-CCeEEEEEeCC--CCCcceeEecccCCCCcCceEECCCC
Q 018474 177 PKLKETTVLHE------GFYFANGIALSKNEDFVVVCESW-KFRCRRYWLKG--DRAGILDAFIENLPGGPDNINLAPDG 247 (355)
Q Consensus 177 p~~~~~~~~~~------~~~~pngi~~~~dg~~l~v~~~~-~~~i~~~~~~~--~~~~~~~~~~~~~~g~p~~i~~d~~G 247 (355)
.++++++.+.. ....|.+++++|||+++|+++.. .+.|..|+++. ........+. . ...|.+++++++|
T Consensus 240 ~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~-~-g~~~~~~~~spdg 317 (361)
T 3scy_A 240 YADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQL-T-GIHPRNFIITPNG 317 (361)
T ss_dssp EETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEE-C-SSCCCEEEECTTS
T ss_pred ecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEec-C-CCCCceEEECCCC
Confidence 66776654432 12346699999999999999987 78899998852 2221222221 2 3468999999999
Q ss_pred C-EEEEee
Q 018474 248 S-FWIGLI 254 (355)
Q Consensus 248 ~-lwv~~~ 254 (355)
+ +|++..
T Consensus 318 ~~l~~~~~ 325 (361)
T 3scy_A 318 KYLLVACR 325 (361)
T ss_dssp CEEEEEET
T ss_pred CEEEEEEC
Confidence 8 666653
No 98
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.28 E-value=1.6e-09 Score=97.62 Aligned_cols=213 Identities=15% Similarity=0.104 Sum_probs=137.0
Q ss_pred CCceEEEeeCCCeEEEEe------------cCCEEEEEEcCCCeeEEeeccCCCcccCeEECCCCC-EEEEeCCCcEEEE
Q 018474 53 HPEDVSVVVSKGALYTAT------------RDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGG-VILCDNEKGLLKV 119 (355)
Q Consensus 53 ~p~~i~~d~~~g~l~~~~------------~~g~i~~~~~~~g~~~~~~~~~~~p~~gl~~d~~g~-L~v~~~~~gl~~~ 119 (355)
.|.+++++++++.+|++. .++.|..+|..+++.......+..+. +++++++|+ ||++ .+.++.+
T Consensus 83 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~--~~~i~~~ 159 (337)
T 1pby_B 83 SLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQIT-MLAWARDGSKLYGL--GRDLHVM 159 (337)
T ss_dssp CTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCC-CEEECTTSSCEEEE--SSSEEEE
T ss_pred cccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcc-eeEECCCCCEEEEe--CCeEEEE
Confidence 789999997677899886 46899999998887665444456788 999999987 7777 3468888
Q ss_pred cC-CC--eEEEcCCcCCcccEEEccCC-cEEEEeCCCCCCCcccccccccc------CCCCeEEEEeCCCCeEEEee--c
Q 018474 120 TE-EG--VEAIVPDASFTNDVIAASDG-TLYFTVASTKYTPTDFYKDMAEG------KPYGQLRKYDPKLKETTVLH--E 187 (355)
Q Consensus 120 ~~-~g--~~~~~~~~~~~~~l~~d~dG-~ly~~d~~~~~~~~~~~~~~~~~------~~~g~l~~~dp~~~~~~~~~--~ 187 (355)
+. ++ ...+... ..+..+.++++| .+|++......-...+......+ .....++.+|+++++..... .
T Consensus 160 d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~ 238 (337)
T 1pby_B 160 DPEAGTLVEDKPIQ-SWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRI 238 (337)
T ss_dssp ETTTTEEEEEECST-TTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEE
T ss_pred ECCCCcEeeeeecc-ccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCC
Confidence 84 56 3333322 223344677877 46665432100000000000000 00126889999888765221 2
Q ss_pred cccccccEEEeCCCCEEEEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCC-EEEEeecCCchhhHhhhc
Q 018474 188 GFYFANGIALSKNEDFVVVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGS-FWIGLIKMNQTGVRAIQK 266 (355)
Q Consensus 188 ~~~~pngi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~-lwv~~~~~~~~~~~~~~~ 266 (355)
....+.+++++||++.+|++ .+.|.+|+++..+. ...+ ..+..|.++.++++|+ +|++...
T Consensus 239 ~~~~~~~~~~s~dg~~l~~~---~~~v~~~d~~~~~~--~~~~--~~~~~~~~~~~s~dg~~l~~~~~~----------- 300 (337)
T 1pby_B 239 MDVFYFSTAVNPAKTRAFGA---YNVLESFDLEKNAS--IKRV--PLPHSYYSVNVSTDGSTVWLGGAL----------- 300 (337)
T ss_dssp CSSCEEEEEECTTSSEEEEE---ESEEEEEETTTTEE--EEEE--ECSSCCCEEEECTTSCEEEEESBS-----------
T ss_pred CCCceeeEEECCCCCEEEEe---CCeEEEEECCCCcC--ccee--cCCCceeeEEECCCCCEEEEEcCC-----------
Confidence 23457789999999999988 37899999854321 1112 1234578899999997 6665322
Q ss_pred chhHHHHHHhccchhhcccCCCCCCceEEEEEeCCCCeEEEEEECCC
Q 018474 267 CREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPD 313 (355)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~ 313 (355)
+.|..+|.++++.+..+..+.
T Consensus 301 --------------------------~~i~v~d~~~~~~~~~~~~~~ 321 (337)
T 1pby_B 301 --------------------------GDLAAYDAETLEKKGQVDLPG 321 (337)
T ss_dssp --------------------------SEEEEEETTTCCEEEEEECGG
T ss_pred --------------------------CcEEEEECcCCcEEEEEEcCC
Confidence 468889986788888886654
No 99
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.27 E-value=4.8e-09 Score=96.77 Aligned_cols=184 Identities=9% Similarity=0.051 Sum_probs=107.8
Q ss_pred eEEEEecC--CEEEE--EEcCCCeeEEeec----cCCCcccCeEECCCCC-EEEEeCCCcEEEEc-C-CC-eEEEcCC--
Q 018474 65 ALYTATRD--GWVKY--FILHNETLVNWKH----IDSQSLLGLTTTKDGG-VILCDNEKGLLKVT-E-EG-VEAIVPD-- 130 (355)
Q Consensus 65 ~l~~~~~~--g~i~~--~~~~~g~~~~~~~----~~~~p~~gl~~d~~g~-L~v~~~~~gl~~~~-~-~g-~~~~~~~-- 130 (355)
.+|+++.. ++|+. +|+.+|+++.+.. ....|. .++++++|+ ||+++.. .+..++ . +| +..+...
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~-~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~ 81 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPIS-WMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPI 81 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCS-EEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEEC
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCc-EEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeec
Confidence 58888874 46764 5677888765533 123688 899999997 7877765 666666 3 66 4332211
Q ss_pred cCCcccEEEccCCc-EEEEeCC-CCCCCccccccccccCCCCeEEEEeCC-CCeEEE-ee----ccccccccEEEeCCCC
Q 018474 131 ASFTNDVIAASDGT-LYFTVAS-TKYTPTDFYKDMAEGKPYGQLRKYDPK-LKETTV-LH----EGFYFANGIALSKNED 202 (355)
Q Consensus 131 ~~~~~~l~~d~dG~-ly~~d~~-~~~~~~~~~~~~~~~~~~g~l~~~dp~-~~~~~~-~~----~~~~~pngi~~~~dg~ 202 (355)
...|.++++++||+ +|+.... ..+. .+....+. ..+.+..|+.+ +++... +. .....+.+++++|||+
T Consensus 82 ~g~~~~~~~spdg~~l~~~~~~~~~~~--~~~~~~~~--~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~ 157 (365)
T 1jof_A 82 GGHPRANDADTNTRAIFLLAAKQPPYA--VYANPFYK--FAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTET 157 (365)
T ss_dssp CSSGGGGCTTSCCEEEEEEECSSTTCC--EEEEEESS--SCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSS
T ss_pred CCCCccEEECCCCCEEEEEEecCCcce--eccceeec--CCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCC
Confidence 13488899999997 3432211 0000 00000000 13344444432 344332 21 1345688999999999
Q ss_pred EEEEEeCCCCeEEEEEeC-CCCCcceeEec-ccCCCCcCceEECCCCC-EEEEee
Q 018474 203 FVVVCESWKFRCRRYWLK-GDRAGILDAFI-ENLPGGPDNINLAPDGS-FWIGLI 254 (355)
Q Consensus 203 ~l~v~~~~~~~i~~~~~~-~~~~~~~~~~~-~~~~g~p~~i~~d~~G~-lwv~~~ 254 (355)
.+|+++...+.|+.|+++ ..+......+. ......|.+++++++|+ +|++..
T Consensus 158 ~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~ 212 (365)
T 1jof_A 158 YLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALME 212 (365)
T ss_dssp EEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEET
T ss_pred EEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEEC
Confidence 999999878899999986 33221111111 01123588899999996 566653
No 100
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.27 E-value=1.3e-09 Score=94.94 Aligned_cols=194 Identities=12% Similarity=0.085 Sum_probs=129.0
Q ss_pred ccCeEECCCCCEEEEeCCC---cEEEEc-CCC--eEEEcCCc-CCcccEEEccCCcEEEEeCCCCCCCccccccccccCC
Q 018474 96 LLGLTTTKDGGVILCDNEK---GLLKVT-EEG--VEAIVPDA-SFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKP 168 (355)
Q Consensus 96 ~~gl~~d~~g~L~v~~~~~---gl~~~~-~~g--~~~~~~~~-~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~ 168 (355)
. ||.++ ++.||+++... .+.++| ++| ...+.... .+..+++++ .++||+.+..
T Consensus 46 q-GL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~-g~~ly~ltw~----------------- 105 (262)
T 3nol_A 46 E-GFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDW-KDKIVGLTWK----------------- 105 (262)
T ss_dssp E-EEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEE-TTEEEEEESS-----------------
T ss_pred c-eEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEe-CCEEEEEEee-----------------
Confidence 6 99998 78999998553 478888 477 44443221 344556665 3489998754
Q ss_pred CCeEEEEeCCCCeEEEeeccccccccEEEeCCCCEEEEEeCCCCeEEEEEeCCCCC-cceeEecccCC-CCcCceEECCC
Q 018474 169 YGQLRKYDPKLKETTVLHEGFYFANGIALSKNEDFVVVCESWKFRCRRYWLKGDRA-GILDAFIENLP-GGPDNINLAPD 246 (355)
Q Consensus 169 ~g~l~~~dp~~~~~~~~~~~~~~pngi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~-g~p~~i~~d~~ 246 (355)
.+.++.||+++.+...-..- .+.|..+++|++.||+++ +.+.|+.+|.+..+. +..++-.++.+ ..++.+... +
T Consensus 106 ~~~v~v~D~~t~~~~~ti~~--~~eG~glt~dg~~L~~Sd-Gs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~ 181 (262)
T 3nol_A 106 NGLGFVWNIRNLRQVRSFNY--DGEGWGLTHNDQYLIMSD-GTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-D 181 (262)
T ss_dssp SSEEEEEETTTCCEEEEEEC--SSCCCCEEECSSCEEECC-SSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-T
T ss_pred CCEEEEEECccCcEEEEEEC--CCCceEEecCCCEEEEEC-CCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-C
Confidence 56899999988875433222 235666667888899998 478999999865332 22221111111 223345554 6
Q ss_pred CCEEEEeecCCchhhHhhhcchhHHHHHHhccchhhcccCCCCCCceEEEEEeCCCCeEEEEEECCCCC--------ccc
Q 018474 247 GSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDAT--------YIS 318 (355)
Q Consensus 247 G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~--------~~~ 318 (355)
|++|+..+.. ..|.++||++|+++..+....-. ...
T Consensus 182 G~lyan~w~~------------------------------------~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~ 225 (262)
T 3nol_A 182 GEIFANVWQT------------------------------------NKIVRIDPETGKVTGIIDLNGILAEAGPLPSPID 225 (262)
T ss_dssp TEEEEEETTS------------------------------------SEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCC
T ss_pred CEEEEEEccC------------------------------------CeEEEEECCCCcEEEEEECCcCccccccccCcCC
Confidence 8999988652 37999999999999988763211 122
Q ss_pred ceeEEEEe--CCEEEEeecCCCeEEEeeCCCCC
Q 018474 319 FVTSAAEF--DGNLYLASLQSNFIGILPLDGPE 349 (355)
Q Consensus 319 ~~~~~~~~--~g~L~v~~~~~~~i~~~~~~~~~ 349 (355)
...+++.+ .++|||++..=+.+..+++....
T Consensus 226 vlNGIA~dp~~~~lfVTGK~Wp~~~ev~~~~~~ 258 (262)
T 3nol_A 226 VLNGIAWDKEHHRLFVTGKLWPKVFEITLTQRV 258 (262)
T ss_dssp CEEEEEEETTTTEEEEEETTCSEEEEEEEEECC
T ss_pred ceEEEEEcCCCCEEEEECCCCCceEEEEEecCC
Confidence 44567765 48999999999999999886543
No 101
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=99.25 E-value=3.7e-09 Score=96.61 Aligned_cols=208 Identities=12% Similarity=0.113 Sum_probs=133.0
Q ss_pred eEEeeccCCCcccCeEECCCCCEEEEeC-CCcEEEEcC-CC-eEEEcC-------CcCCcccEEEcc----CCcEEEEeC
Q 018474 85 LVNWKHIDSQSLLGLTTTKDGGVILCDN-EKGLLKVTE-EG-VEAIVP-------DASFTNDVIAAS----DGTLYFTVA 150 (355)
Q Consensus 85 ~~~~~~~~~~p~~gl~~d~~g~L~v~~~-~~gl~~~~~-~g-~~~~~~-------~~~~~~~l~~d~----dG~ly~~d~ 150 (355)
.+.++.....|. +|+++++|+|||++. .+.|++++. +| .+.+.. ....+.+|+++| +|.||++.+
T Consensus 24 ~~~va~gL~~P~-~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt 102 (347)
T 3das_A 24 LRTVATGLNSPW-GLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFT 102 (347)
T ss_dssp EEEEECCCSSEE-EEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEE
T ss_pred eEEeecCCCCce-EEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEe
Confidence 344555556799 999999999999997 456888875 45 443321 126789999998 488999753
Q ss_pred CCCCCCccccccccccCCCCeEEEEeCCCC--------eEEEeec-----cccccccEEEeCCCCEEEEEe---------
Q 018474 151 STKYTPTDFYKDMAEGKPYGQLRKYDPKLK--------ETTVLHE-----GFYFANGIALSKNEDFVVVCE--------- 208 (355)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~--------~~~~~~~-----~~~~pngi~~~~dg~~l~v~~--------- 208 (355)
.. ..++|.||..+.+ +.+++.. ..+....|+++|||. ||++.
T Consensus 103 ~~---------------~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~-Lyvt~Gd~~~~~~~ 166 (347)
T 3das_A 103 SA---------------SDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKM-LYAGTGESGDTGLS 166 (347)
T ss_dssp CS---------------SSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSC-EEEECBCTTCGGGT
T ss_pred cC---------------CCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCC-EEEEECCCCCCccc
Confidence 21 1346777754431 2233322 234567799999997 99984
Q ss_pred ----CCCCeEEEEEeCCCC-----CcceeEecccCCCCcCceEECCCCCEEEEeecCCchhhHhhhcchhHHHHHHhccc
Q 018474 209 ----SWKFRCRRYWLKGDR-----AGILDAFIENLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPG 279 (355)
Q Consensus 209 ----~~~~~i~~~~~~~~~-----~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (355)
...+.|+|++.++.- ....+++..++. -|.++++|++|+||++..+...
T Consensus 167 qd~~~~~G~IlRi~~dG~ip~~nPf~~~~i~a~G~R-Np~Gla~dp~G~L~~~d~g~~~--------------------- 224 (347)
T 3das_A 167 QDRKSLGGKILRMTPDGEPAPGNPFPGSPVYSYGHR-NVQGLAWDDKQRLFASEFGQDT--------------------- 224 (347)
T ss_dssp TCTTCSTTCEEEECTTSSBCTTCSSTTCCEEEBCCS-BCCEEEECTTCCEEEEECCSSS---------------------
T ss_pred cCCCCCCCEEEEEeCCCCccCCCCCCCCeEEeeCCC-CcceEEECCCCCEEEEecCCCC---------------------
Confidence 235789999987631 112234443332 3889999999999999976421
Q ss_pred hhhcccCCCCCCceEEEEEeCCCCe-----------------EEEEEECCCCCcccceeEEEEeCCEEEEeecCCCeEEE
Q 018474 280 LISLLLPMGSDAGARVVKVDGNDGK-----------------IIRDFNDPDATYISFVTSAAEFDGNLYLASLQSNFIGI 342 (355)
Q Consensus 280 ~~~~~~~~~~~~~~~v~~~~~~~g~-----------------~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~~~i~~ 342 (355)
...|.++.+ .+. .+..|. +. ...++++...+|.+|++.+.+.+|.+
T Consensus 225 ------------~deln~i~~-G~nyGwP~~~g~~~~~~~~~P~~~~~-~~---~~ap~G~~~~~g~~~~~~l~~~~l~~ 287 (347)
T 3das_A 225 ------------WDELNAIKP-GDNYGWPEAEGKGGGSGFHDPVAQWS-TD---EASPSGIAYAEGSVWMAGLRGERLWR 287 (347)
T ss_dssp ------------CEEEEEECT-TCBCCTTTCCSSCCCTTCCCCSEEEC-TT---TCCEEEEEEETTEEEEEESTTCSEEE
T ss_pred ------------CceeeEEcC-CCEecCCcccCCCCCccccCCcEecC-CC---CCCCcceEEEcCceeeccccCCEEEE
Confidence 012222221 110 011111 11 12456778889999999999999999
Q ss_pred eeCCCC
Q 018474 343 LPLDGP 348 (355)
Q Consensus 343 ~~~~~~ 348 (355)
+++...
T Consensus 288 v~~~~~ 293 (347)
T 3das_A 288 IPLKGT 293 (347)
T ss_dssp EEEETT
T ss_pred EEecCC
Confidence 998754
No 102
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.25 E-value=5.2e-09 Score=94.84 Aligned_cols=216 Identities=15% Similarity=0.097 Sum_probs=132.1
Q ss_pred CCceEEEeeCCCeEEEEe-cCCEEEEEEcCCCeeEEeeccC-------CCcccCeEECCCCC-EEEEeCC----------
Q 018474 53 HPEDVSVVVSKGALYTAT-RDGWVKYFILHNETLVNWKHID-------SQSLLGLTTTKDGG-VILCDNE---------- 113 (355)
Q Consensus 53 ~p~~i~~d~~~g~l~~~~-~~g~i~~~~~~~g~~~~~~~~~-------~~p~~gl~~d~~g~-L~v~~~~---------- 113 (355)
.|.+++++++++.+|++. .++.|+.+|..+++........ ..+. +++++++|+ ||++...
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~-~~~~spdg~~l~~~~~~~~~~~~~~~~ 122 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMY-SFAISPDGKEVYATVNPTQRLNDHYVV 122 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSS-CEEECTTSSEEEEEEEEEEECSSCEEE
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEccccccccccccc-ceEECCCCCEEEEEccccccccccccc
Confidence 699999996666788776 4789999999888765433322 2278 999999996 6666532
Q ss_pred --CcEEEEc-CCC-----eEEEcCCcCCcccEEEccCCcEEEEeCCC-CCCCccc-cccccc-cC---------------
Q 018474 114 --KGLLKVT-EEG-----VEAIVPDASFTNDVIAASDGTLYFTVAST-KYTPTDF-YKDMAE-GK--------------- 167 (355)
Q Consensus 114 --~gl~~~~-~~g-----~~~~~~~~~~~~~l~~d~dG~ly~~d~~~-~~~~~~~-~~~~~~-~~--------------- 167 (355)
+.++.++ .++ ++..... ..+.+++++++|++|+++..- .+..... ....+. +.
T Consensus 123 ~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~l~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (349)
T 1jmx_B 123 KPPRLEVFSTADGLEAKPVRTFPMP-RQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFW 201 (349)
T ss_dssp CCCEEEEEEGGGGGGBCCSEEEECC-SSCCCEEECTTSCEEEESSSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCC
T ss_pred CCCeEEEEECCCccccceeeeccCC-CcccceeECCCCcEEEccCcEEEEeCCCCceeccccccccCCccccCccceeee
Confidence 4677777 343 2222222 467888999999988864320 0111000 000000 00
Q ss_pred -----------------------------CCCeEEEEeCCCCeEEEee--ccccccccEEEeC-CCCEEEEEeCCCCeEE
Q 018474 168 -----------------------------PYGQLRKYDPKLKETTVLH--EGFYFANGIALSK-NEDFVVVCESWKFRCR 215 (355)
Q Consensus 168 -----------------------------~~g~l~~~dp~~~~~~~~~--~~~~~pngi~~~~-dg~~l~v~~~~~~~i~ 215 (355)
....++.+|..+++++.+. .....+.+++++| |++.+|++ .+.|.
T Consensus 202 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~---~~~v~ 278 (349)
T 1jmx_B 202 PHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV---LNRLA 278 (349)
T ss_dssp CCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE---ESEEE
T ss_pred cCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE---cCeEE
Confidence 0001223555555544332 1123567889999 99988888 57899
Q ss_pred EEEeCCCCCcceeEecccCCCCcCceEECCCCC-EEEEeecCCchhhHhhhcchhHHHHHHhccchhhcccCCCCCCceE
Q 018474 216 RYWLKGDRAGILDAFIENLPGGPDNINLAPDGS-FWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGAR 294 (355)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~-lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (355)
+|+++..+. ...+ ..+..|.+++++++|+ +|++... +.
T Consensus 279 ~~d~~~~~~--~~~~--~~~~~~~~~~~s~dg~~l~~~~~~-------------------------------------~~ 317 (349)
T 1jmx_B 279 KYDLKQRKL--IKAA--NLDHTYYCVAFDKKGDKLYLGGTF-------------------------------------ND 317 (349)
T ss_dssp EEETTTTEE--EEEE--ECSSCCCEEEECSSSSCEEEESBS-------------------------------------SE
T ss_pred EEECccCeE--EEEE--cCCCCccceEECCCCCEEEEecCC-------------------------------------Ce
Confidence 999854321 1122 1233478899999985 7774322 46
Q ss_pred EEEEeCCCCeEEEEEECCCC
Q 018474 295 VVKVDGNDGKIIRDFNDPDA 314 (355)
Q Consensus 295 v~~~~~~~g~~~~~~~~~~g 314 (355)
|..+|.++++.+..+..+.|
T Consensus 318 v~v~d~~~~~~~~~~~~~~~ 337 (349)
T 1jmx_B 318 LAVFNPDTLEKVKNIKLPGG 337 (349)
T ss_dssp EEEEETTTTEEEEEEECSSS
T ss_pred EEEEeccccceeeeeecCCC
Confidence 88889867888888877643
No 103
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=99.21 E-value=1.5e-09 Score=100.10 Aligned_cols=199 Identities=13% Similarity=0.121 Sum_probs=118.6
Q ss_pred CCCceEEEeeC---CCeEEEEec--------CCEEEEEEcCCC--e---eEEeec-c------CCCcccCeEECCCCCEE
Q 018474 52 NHPEDVSVVVS---KGALYTATR--------DGWVKYFILHNE--T---LVNWKH-I------DSQSLLGLTTTKDGGVI 108 (355)
Q Consensus 52 ~~p~~i~~d~~---~g~l~~~~~--------~g~i~~~~~~~g--~---~~~~~~-~------~~~p~~gl~~d~~g~L~ 108 (355)
.+|.+|+++|+ ++.||+... ..+|.+++...+ + .+.+.. . ...+. +|+++++|.||
T Consensus 66 ~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~-~l~~~pdG~Ly 144 (353)
T 2g8s_A 66 GGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGG-RLVFDGKGYLF 144 (353)
T ss_dssp CSEEEEEECTTHHHHCEEEEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCC-CEEECSSSEEE
T ss_pred CCceeEEECCCCCCCCEEEEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCc-cEEECCCCcEE
Confidence 56889999964 789998753 247888877433 2 222211 1 12377 89999999999
Q ss_pred EEeCC--------------CcEEEEcCCC-e--------------EEEcCCcCCcccEEEcc-CCcEEEEeCCCCCCCcc
Q 018474 109 LCDNE--------------KGLLKVTEEG-V--------------EAIVPDASFTNDVIAAS-DGTLYFTVASTKYTPTD 158 (355)
Q Consensus 109 v~~~~--------------~gl~~~~~~g-~--------------~~~~~~~~~~~~l~~d~-dG~ly~~d~~~~~~~~~ 158 (355)
++... +.|+|++++| + +.++.....|.++++|+ +|+||+++..... .+
T Consensus 145 v~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~~~--~d 222 (353)
T 2g8s_A 145 IALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGPRG--GD 222 (353)
T ss_dssp EEECCTTCGGGGGCTTSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECSBS--CE
T ss_pred EEECCCCCCCccCCCCCCCeEEEEECCCCCCCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCCCC--Cc
Confidence 99633 2488998654 2 22333337799999999 7999999865210 01
Q ss_pred ccccccccCCCCeE-----EEEeC----------CCCeEEE--eeccccccccEEEeC-------CCCEEEEEeCCCCeE
Q 018474 159 FYKDMAEGKPYGQL-----RKYDP----------KLKETTV--LHEGFYFANGIALSK-------NEDFVVVCESWKFRC 214 (355)
Q Consensus 159 ~~~~~~~~~~~g~l-----~~~dp----------~~~~~~~--~~~~~~~pngi~~~~-------dg~~l~v~~~~~~~i 214 (355)
....+..+...|.- ..|+. ..+.... .......|.|+++.. +| .+|+++...++|
T Consensus 223 ei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g-~l~v~~~~~~~v 301 (353)
T 2g8s_A 223 EINIPQKGKNYGWPLATWGINYSGFKIPEAKGEIVAGTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQ-KLFIGALKDKDV 301 (353)
T ss_dssp EEECCCTTCBCCTTTBCSSBCTTSSCCTTCCBSSCTTSCCCSEEESSCCCEEEEEEECCSSSGGGTT-EEEEEETTTTEE
T ss_pred EEeEeccCCcCCCCCccCCCCCCCCccCcccCCCCCCccCCeEEeCCCcCcceeEEECCccCcccCC-cEEEEEccCCEE
Confidence 11111111000000 00000 0000000 001123578888875 34 599999999999
Q ss_pred EEEEeCCCCCcceeEecccCCCCcCceEECCCCCEEEEee
Q 018474 215 RRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLI 254 (355)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~ 254 (355)
+++++++.+....+.+.....+.|.++++++||.|||++.
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~td 341 (353)
T 2g8s_A 302 IVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVLTD 341 (353)
T ss_dssp EEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEEEEC
T ss_pred EEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEEEEe
Confidence 9999875332222334433345689999999999999864
No 104
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.18 E-value=1.1e-08 Score=96.30 Aligned_cols=237 Identities=13% Similarity=0.015 Sum_probs=139.0
Q ss_pred CCCeEEEEecC-----CEEEEEEcCCCeeEEeeccCCCcccCeEECCCCC-EEEEeC----------CCcEEEEcC-CC-
Q 018474 62 SKGALYTATRD-----GWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGG-VILCDN----------EKGLLKVTE-EG- 123 (355)
Q Consensus 62 ~~g~l~~~~~~-----g~i~~~~~~~g~~~~~~~~~~~p~~gl~~d~~g~-L~v~~~----------~~gl~~~~~-~g- 123 (355)
+...+|+.+.. +.|..+|+.+++...-...+..| +++++++|+ |||++. .+.+..+|. ++
T Consensus 83 ~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~ 160 (426)
T 3c75_H 83 DARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFL 160 (426)
T ss_dssp CTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC
T ss_pred CCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCc
Confidence 46789998763 68999999999876655555566 799999985 999974 234778884 55
Q ss_pred -eEEEcCC-------cCCcccEEEccCC-cEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeecc----cc
Q 018474 124 -VEAIVPD-------ASFTNDVIAASDG-TLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEG----FY 190 (355)
Q Consensus 124 -~~~~~~~-------~~~~~~l~~d~dG-~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~----~~ 190 (355)
+..+... ...|.++++++|| .+|+++... .+.+..+|.+++++..-..- ..
T Consensus 161 vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~----------------~~~VsVID~~t~kvv~~I~v~g~~~~ 224 (426)
T 3c75_H 161 PIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSP----------------APAVGVVDLEGKTFDRMLDVPDCYHI 224 (426)
T ss_dssp EEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSS----------------SCEEEEEETTTTEEEEEEECCSEEEE
T ss_pred EEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCC----------------CCeEEEEECCCCeEEEEEEcCCceee
Confidence 4444321 1579999999999 799987420 12344444444433211100 00
Q ss_pred ccc-----------------------------------------cEEEeCCCCEEEEEeCCCCeEEEEEeCCCCCc---c
Q 018474 191 FAN-----------------------------------------GIALSKNEDFVVVCESWKFRCRRYWLKGDRAG---I 226 (355)
Q Consensus 191 ~pn-----------------------------------------gi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~---~ 226 (355)
.|. .++++++++.+|+... .+.++.++..+.... .
T Consensus 225 ~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~-~g~V~ViD~~~~~~~v~~~ 303 (426)
T 3c75_H 225 FPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTY-TGKIFQADLTAEGATFRAP 303 (426)
T ss_dssp EEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBT-TSEEEEEEECSSCEEECCC
T ss_pred ccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeC-CCcEEEEeccCCceEEeee
Confidence 111 2234566665555543 456666666432211 1
Q ss_pred eeEecc---cCCCCcCc---eEECCCC-CEEEEeecCCchhhHhhhcchhHHHHHHhccchhhcccCCCCCCceEEEEEe
Q 018474 227 LDAFIE---NLPGGPDN---INLAPDG-SFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVD 299 (355)
Q Consensus 227 ~~~~~~---~~~g~p~~---i~~d~~G-~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 299 (355)
.+...+ .....|.+ +.++++| ++||+........ .....+.|..+|
T Consensus 304 ~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gt---------------------------hk~~s~~VsVID 356 (426)
T 3c75_H 304 IEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWK---------------------------HKAASRFVVVLN 356 (426)
T ss_dssp EESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTC---------------------------TTSCEEEEEEEE
T ss_pred eeeccccccccccccCCceeeEEcCCCCEEEEEeccccccc---------------------------ccCCCCEEEEEE
Confidence 100000 00012333 7777776 5888875310000 001225799999
Q ss_pred CCCCeEEEEEECCCCCcccceeEEEE--eCC-EEEEeecCCCeEEEeeCCCCC
Q 018474 300 GNDGKIIRDFNDPDATYISFVTSAAE--FDG-NLYLASLQSNFIGILPLDGPE 349 (355)
Q Consensus 300 ~~~g~~~~~~~~~~g~~~~~~~~~~~--~~g-~L~v~~~~~~~i~~~~~~~~~ 349 (355)
.++++.+..+..+. .+.++.. ++. .||+++..++.|.++++.+-.
T Consensus 357 ~~T~kvv~~I~vg~-----~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~k 404 (426)
T 3c75_H 357 AETGERINKIELGH-----EIDSINVSQDAEPLLYALSAGTQTLHIYDAATGE 404 (426)
T ss_dssp TTTCCEEEEEEEEE-----EECEEEECCSSSCEEEEEETTTTEEEEEETTTCC
T ss_pred CCCCeEEEEEECCC-----CcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCC
Confidence 97889888886532 2333443 345 788888889999999987654
No 105
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.18 E-value=8.2e-08 Score=86.21 Aligned_cols=229 Identities=11% Similarity=0.045 Sum_probs=146.4
Q ss_pred CCCceEEEeeCCCeEEEEecCCEEEEEEcCCCeeE---EeeccCCCcccCeEECCCCCEEE-EeCCCcEEEEc-CCC--e
Q 018474 52 NHPEDVSVVVSKGALYTATRDGWVKYFILHNETLV---NWKHIDSQSLLGLTTTKDGGVIL-CDNEKGLLKVT-EEG--V 124 (355)
Q Consensus 52 ~~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~---~~~~~~~~p~~gl~~d~~g~L~v-~~~~~gl~~~~-~~g--~ 124 (355)
....++++.+++..++++..+|.|..++..+++.. .+......+. .+++.+++++++ +...+.+..++ .++ .
T Consensus 98 ~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~ 176 (337)
T 1gxr_A 98 NYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACY-ALAISPDSKVCFSCCSDGNIAVWDLHNQTLV 176 (337)
T ss_dssp SBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEE-EEEECTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred CcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceE-EEEECCCCCEEEEEeCCCcEEEEeCCCCcee
Confidence 44678889876777888889999999998777532 2222234466 889998887544 54444567777 455 4
Q ss_pred EEEcCCcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeeccccccccEEEeCCCCEE
Q 018474 125 EAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYFANGIALSKNEDFV 204 (355)
Q Consensus 125 ~~~~~~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~~~~pngi~~~~dg~~l 204 (355)
..+......+.+++++++|+..++... .+.+..||..+++.............++++|+++.+
T Consensus 177 ~~~~~~~~~i~~~~~~~~~~~l~~~~~-----------------dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l 239 (337)
T 1gxr_A 177 RQFQGHTDGASCIDISNDGTKLWTGGL-----------------DNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWL 239 (337)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEET-----------------TSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEE
T ss_pred eeeecccCceEEEEECCCCCEEEEEec-----------------CCcEEEEECCCCceEeeecCCCceEEEEECCCCCEE
Confidence 555444467889999999976655332 567999998877655444334446788999999977
Q ss_pred EEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCCEEEEeecCCchhhHhhhcchhHHHHHHhccchhhcc
Q 018474 205 VVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLL 284 (355)
Q Consensus 205 ~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (355)
+++. ..+.|..|+++.... ..+. ...+....+.++++|++.++....
T Consensus 240 ~~~~-~~~~i~~~~~~~~~~---~~~~-~~~~~v~~~~~~~~~~~l~~~~~d---------------------------- 286 (337)
T 1gxr_A 240 AVGM-ESSNVEVLHVNKPDK---YQLH-LHESCVLSLKFAYCGKWFVSTGKD---------------------------- 286 (337)
T ss_dssp EEEE-TTSCEEEEETTSSCE---EEEC-CCSSCEEEEEECTTSSEEEEEETT----------------------------
T ss_pred EEEc-CCCcEEEEECCCCCe---EEEc-CCccceeEEEECCCCCEEEEecCC----------------------------
Confidence 6665 567899999865322 1222 233345668899999876665432
Q ss_pred cCCCCCCceEEEEEeCCCCeEEEEEECCCCCcccceeEEEEe-CC-EEEEeecCCCeEEEeeC
Q 018474 285 LPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF-DG-NLYLASLQSNFIGILPL 345 (355)
Q Consensus 285 ~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-~g-~L~v~~~~~~~i~~~~~ 345 (355)
+.|..++.++++....... .+ .+..+... ++ .|..++ ..+.|..+++
T Consensus 287 --------g~i~~~~~~~~~~~~~~~~-~~----~v~~~~~s~~~~~l~~~~-~dg~i~iw~~ 335 (337)
T 1gxr_A 287 --------NLLNAWRTPYGASIFQSKE-SS----SVLSCDISVDDKYIVTGS-GDKKATVYEV 335 (337)
T ss_dssp --------SEEEEEETTTCCEEEEEEC-SS----CEEEEEECTTSCEEEEEE-TTSCEEEEEE
T ss_pred --------CcEEEEECCCCeEEEEecC-CC----cEEEEEECCCCCEEEEec-CCCeEEEEEE
Confidence 4677788656666544432 22 35555544 34 444444 4666766653
No 106
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.17 E-value=1.6e-07 Score=84.16 Aligned_cols=244 Identities=11% Similarity=0.138 Sum_probs=152.9
Q ss_pred CCCCCCCceEEEeeCCCeEEEEecCCEEEEEEcCCCeeEEeec-cCCCcccCeEECCCCCEEEEeCCCc-EEEEc-CCC-
Q 018474 48 EGCVNHPEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKH-IDSQSLLGLTTTKDGGVILCDNEKG-LLKVT-EEG- 123 (355)
Q Consensus 48 ~~~~~~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~~~-~~~~p~~gl~~d~~g~L~v~~~~~g-l~~~~-~~g- 123 (355)
.+.-..-.++++.+++..+.+++.+|.|..++..+++...... ....+. .+++.++|+++++...++ +..++ .++
T Consensus 20 ~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~s~~~d~~i~vwd~~~~~ 98 (312)
T 4ery_A 20 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGIS-DVAWSSDSNLLVSASDDKTLKIWDVSSGK 98 (312)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEE-EEEECTTSSEEEEEETTSEEEEEETTTCC
T ss_pred cccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceE-EEEEcCCCCEEEEECCCCEEEEEECCCCc
Confidence 3445567889999777778888899999999988777654332 233466 889999998766554555 44555 455
Q ss_pred -eEEEcCCcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeecc-ccccccEEEeCCC
Q 018474 124 -VEAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEG-FYFANGIALSKNE 201 (355)
Q Consensus 124 -~~~~~~~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~-~~~pngi~~~~dg 201 (355)
+..+......+..+.+++++++.++.+. .+.+..||..+++....... ......+++++++
T Consensus 99 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-----------------d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~ 161 (312)
T 4ery_A 99 CLKTLKGHSNYVFCCNFNPQSNLIVSGSF-----------------DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDG 161 (312)
T ss_dssp EEEEEECCSSCEEEEEECSSSSEEEEEET-----------------TSCEEEEETTTCCEEEEECCCSSCEEEEEECTTS
T ss_pred EEEEEcCCCCCEEEEEEcCCCCEEEEEeC-----------------CCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCC
Confidence 5555444467888999999987766433 45788899877764333222 2334678999999
Q ss_pred CEEEEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCCEEEEeecCCchhhHhhhcchhHHHHHHhccchh
Q 018474 202 DFVVVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLI 281 (355)
Q Consensus 202 ~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (355)
+.++.+ ...+.|..|++.... ....+..........+.++++|++.++....
T Consensus 162 ~~l~~~-~~d~~i~~wd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d------------------------- 213 (312)
T 4ery_A 162 SLIVSS-SYDGLCRIWDTASGQ--CLKTLIDDDNPPVSFVKFSPNGKYILAATLD------------------------- 213 (312)
T ss_dssp SEEEEE-ETTSCEEEEETTTCC--EEEEECCSSCCCEEEEEECTTSSEEEEEETT-------------------------
T ss_pred CEEEEE-eCCCcEEEEECCCCc--eeeEEeccCCCceEEEEECCCCCEEEEEcCC-------------------------
Confidence 965554 456789899875432 1222221111223446788999876665432
Q ss_pred hcccCCCCCCceEEEEEeCCCCeEEEEEECCCCCcccceeEEEEeCCEEEEeecCCCeEEEeeCCCC
Q 018474 282 SLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFDGNLYLASLQSNFIGILPLDGP 348 (355)
Q Consensus 282 ~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~~~i~~~~~~~~ 348 (355)
+.|..+|..+++.+..+..+..............++.+.++....+.|..+++.+.
T Consensus 214 -----------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~ 269 (312)
T 4ery_A 214 -----------NTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTK 269 (312)
T ss_dssp -----------TEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTC
T ss_pred -----------CeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCc
Confidence 35777787677877777665443222222222234555555555667777776543
No 107
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.17 E-value=6.7e-09 Score=90.47 Aligned_cols=146 Identities=21% Similarity=0.178 Sum_probs=104.6
Q ss_pred CCCceEEEeeCCCeEEEEec-CCEEEEEEcCCCeeEEeeccCCCcccCeEECCCCCEEEEeCCCcEEEEcC-CC--eEEE
Q 018474 52 NHPEDVSVVVSKGALYTATR-DGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVTE-EG--VEAI 127 (355)
Q Consensus 52 ~~p~~i~~d~~~g~l~~~~~-~g~i~~~~~~~g~~~~~~~~~~~p~~gl~~d~~g~L~v~~~~~gl~~~~~-~g--~~~~ 127 (355)
.-.|+++.+ ++.+|+.+. ++.++.+|+++.+...-........ |++.| .++||+++....+..+|+ +. ...+
T Consensus 87 ~FgeGit~~--g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~eG~-glt~d-g~~L~~SdGs~~i~~iDp~T~~v~~~I 162 (262)
T 3nol_A 87 YFGEGISDW--KDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDGEGW-GLTHN-DQYLIMSDGTPVLRFLDPESLTPVRTI 162 (262)
T ss_dssp CCEEEEEEE--TTEEEEEESSSSEEEEEETTTCCEEEEEECSSCCC-CEEEC-SSCEEECCSSSEEEEECTTTCSEEEEE
T ss_pred cceeEEEEe--CCEEEEEEeeCCEEEEEECccCcEEEEEECCCCce-EEecC-CCEEEEECCCCeEEEEcCCCCeEEEEE
Confidence 345888887 678999875 7899999998887654333344567 88876 468999986566888885 44 3333
Q ss_pred cC-----CcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeecc-------------c
Q 018474 128 VP-----DASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEG-------------F 189 (355)
Q Consensus 128 ~~-----~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~-------------~ 189 (355)
.. ....+|.+... +|.||+.... .+.|.++||+++++....+- .
T Consensus 163 ~V~~~g~~~~~lNELe~~-~G~lyan~w~-----------------~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~ 224 (262)
T 3nol_A 163 TVTAHGEELPELNELEWV-DGEIFANVWQ-----------------TNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPI 224 (262)
T ss_dssp ECEETTEECCCEEEEEEE-TTEEEEEETT-----------------SSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSC
T ss_pred EeccCCccccccceeEEE-CCEEEEEEcc-----------------CCeEEEEECCCCcEEEEEECCcCccccccccCcC
Confidence 22 12667778765 7899998754 45899999999987644321 2
Q ss_pred cccccEEEeCCCCEEEEEeCCCCeEEEEEe
Q 018474 190 YFANGIALSKNEDFVVVCESWKFRCRRYWL 219 (355)
Q Consensus 190 ~~pngi~~~~dg~~l~v~~~~~~~i~~~~~ 219 (355)
..+||||++|+++.+|++.-.=..++.+.+
T Consensus 225 ~vlNGIA~dp~~~~lfVTGK~Wp~~~ev~~ 254 (262)
T 3nol_A 225 DVLNGIAWDKEHHRLFVTGKLWPKVFEITL 254 (262)
T ss_dssp CCEEEEEEETTTTEEEEEETTCSEEEEEEE
T ss_pred CceEEEEEcCCCCEEEEECCCCCceEEEEE
Confidence 367999999999999999754445555543
No 108
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.16 E-value=4e-09 Score=91.88 Aligned_cols=192 Identities=14% Similarity=0.137 Sum_probs=126.2
Q ss_pred cccCeEECCCCCEEEEeCCCc-EEEEc-CCC--eEEEcCCcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCC
Q 018474 95 SLLGLTTTKDGGVILCDNEKG-LLKVT-EEG--VEAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYG 170 (355)
Q Consensus 95 p~~gl~~d~~g~L~v~~~~~g-l~~~~-~~g--~~~~~~~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g 170 (355)
.. ||.++ +++||+++...| |.++| ++| +..+.....+..+++++. ++||+.+.. .+
T Consensus 57 tq-GL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~l~~~~FgeGit~~g-~~Ly~ltw~-----------------~~ 116 (268)
T 3nok_A 57 TQ-GLVFH-QGHFFESTGHQGTLRQLSLESAQPVWMERLGNIFAEGLASDG-ERLYQLTWT-----------------EG 116 (268)
T ss_dssp EE-EEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEEECTTCCEEEEEECS-SCEEEEESS-----------------SC
T ss_pred cc-eEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEECCCCcceeEEEEeC-CEEEEEEcc-----------------CC
Confidence 35 89987 589999997754 66667 467 444422213445566653 489998754 56
Q ss_pred eEEEEeCCCCeEEEeeccccccccEEEeCCCCEEEEEeCCCCeEEEEEeCCCCC-cceeEecccCC-CCcCceEECCCCC
Q 018474 171 QLRKYDPKLKETTVLHEGFYFANGIALSKNEDFVVVCESWKFRCRRYWLKGDRA-GILDAFIENLP-GGPDNINLAPDGS 248 (355)
Q Consensus 171 ~l~~~dp~~~~~~~~~~~~~~pngi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~-g~p~~i~~d~~G~ 248 (355)
.++.||+++.+...-..- .+.|..+++|++.||+++ +.+.|+.+|.+..+. +..++-....+ ..++.+... +|+
T Consensus 117 ~v~V~D~~Tl~~~~ti~~--~~eGwGLt~Dg~~L~vSd-Gs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~ 192 (268)
T 3nok_A 117 LLFTWSGMPPQRERTTRY--SGEGWGLCYWNGKLVRSD-GGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGV 192 (268)
T ss_dssp EEEEEETTTTEEEEEEEC--SSCCCCEEEETTEEEEEC-SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE
T ss_pred EEEEEECCcCcEEEEEeC--CCceeEEecCCCEEEEEC-CCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCE
Confidence 899999998876533322 245566667889999998 588999999765332 22221111111 123445554 789
Q ss_pred EEEEeecCCchhhHhhhcchhHHHHHHhccchhhcccCCCCCCceEEEEEeCCCCeEEEEEECCC---------CCcccc
Q 018474 249 FWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPD---------ATYISF 319 (355)
Q Consensus 249 lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~---------g~~~~~ 319 (355)
+|+..+.. ..|.++||++|+++..+.-.. ......
T Consensus 193 lyanvw~s------------------------------------~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~v 236 (268)
T 3nok_A 193 IYANIWHS------------------------------------SDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAV 236 (268)
T ss_dssp EEEEETTC------------------------------------SEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCC
T ss_pred EEEEECCC------------------------------------CeEEEEeCCCCcEEEEEECCCCcccccccccCcCCc
Confidence 99988652 379999999999988885421 001234
Q ss_pred eeEEEEe--CCEEEEeecCCCeEEEeeCC
Q 018474 320 VTSAAEF--DGNLYLASLQSNFIGILPLD 346 (355)
Q Consensus 320 ~~~~~~~--~g~L~v~~~~~~~i~~~~~~ 346 (355)
..+++.+ +++||+++..=+++..++++
T Consensus 237 lNGIA~dp~~~rlfVTGK~Wp~~~ev~~~ 265 (268)
T 3nok_A 237 LNGIAVEPGSGRIFMTGKLWPRLFEVRLD 265 (268)
T ss_dssp EEEEEECTTTCCEEEEETTCSEEEEEEEE
T ss_pred eEEEEEcCCCCEEEEeCCCCCceEEEEEE
Confidence 5566655 48899999999999988873
No 109
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.16 E-value=5e-09 Score=98.54 Aligned_cols=223 Identities=13% Similarity=0.086 Sum_probs=138.5
Q ss_pred eEecCCCCCCCceEEEeeCCCeEEEEec----------CCEEEEEEcCCCeeEEeecc--------CCCcccCeEECCCC
Q 018474 44 TKLGEGCVNHPEDVSVVVSKGALYTATR----------DGWVKYFILHNETLVNWKHI--------DSQSLLGLTTTKDG 105 (355)
Q Consensus 44 ~~~~~~~~~~p~~i~~d~~~g~l~~~~~----------~g~i~~~~~~~g~~~~~~~~--------~~~p~~gl~~d~~g 105 (355)
.+++.| ..| +|+++++++.+|+++. ++.|..+|..+++....... +..|. +++++++|
T Consensus 113 ~~I~vG--~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~-~~~~spDG 188 (426)
T 3c75_H 113 GMTDGG--FLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQW-MNALTPDN 188 (426)
T ss_dssp EEEEEC--SSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGG-GSEECTTS
T ss_pred EEEECC--CCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcc-eEEEcCCC
Confidence 356666 568 9999988899999873 56799999988876543322 35699 99999998
Q ss_pred C-EEEEeCC--CcEEEEc-CCC--eEEEcCCc---CCccc----EEEccCCcEE-EEeCCCC--------CCCccc----
Q 018474 106 G-VILCDNE--KGLLKVT-EEG--VEAIVPDA---SFTND----VIAASDGTLY-FTVASTK--------YTPTDF---- 159 (355)
Q Consensus 106 ~-L~v~~~~--~gl~~~~-~~g--~~~~~~~~---~~~~~----l~~d~dG~ly-~~d~~~~--------~~~~~~---- 159 (355)
+ |||+... +.+..+| .++ +..+.... ..|.+ +++.++|++. ++....+ +.....
T Consensus 189 k~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~ 268 (426)
T 3c75_H 189 KNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLIN 268 (426)
T ss_dssp SEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCS
T ss_pred CEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceee
Confidence 5 8998753 4588888 455 44443321 12222 5667788544 4432111 110000
Q ss_pred -------cccccccCCCCeEEEEeCCCCeEEEeec----------ccccccc---EEEeCCCCEEEEEeCC---------
Q 018474 160 -------YKDMAEGKPYGQLRKYDPKLKETTVLHE----------GFYFANG---IALSKNEDFVVVCESW--------- 210 (355)
Q Consensus 160 -------~~~~~~~~~~g~l~~~dp~~~~~~~~~~----------~~~~png---i~~~~dg~~l~v~~~~--------- 210 (355)
...++.....+.++.+|..++..+.... ....|.| +++++|++.+|++...
T Consensus 269 ~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~ 348 (426)
T 3c75_H 269 HPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAA 348 (426)
T ss_dssp CCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSC
T ss_pred EeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCC
Confidence 0011111224567777765554433211 0123555 8999999999998642
Q ss_pred CCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCC-EEEEeecCCchhhHhhhcchhHHHHHHhccchhhcccCCCC
Q 018474 211 KFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGS-FWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGS 289 (355)
Q Consensus 211 ~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~-lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (355)
.+.|+++|....+. ...+ ..+..|.++.+++||+ +|+.++..
T Consensus 349 s~~VsVID~~T~kv--v~~I--~vg~~P~gia~spDg~~~lyv~n~~--------------------------------- 391 (426)
T 3c75_H 349 SRFVVVLNAETGER--INKI--ELGHEIDSINVSQDAEPLLYALSAG--------------------------------- 391 (426)
T ss_dssp EEEEEEEETTTCCE--EEEE--EEEEEECEEEECCSSSCEEEEEETT---------------------------------
T ss_pred CCEEEEEECCCCeE--EEEE--ECCCCcCeEEEccCCCEEEEEEcCC---------------------------------
Confidence 34799999754322 1112 1233599999999998 76666531
Q ss_pred CCceEEEEEeCCCCeEEEEE
Q 018474 290 DAGARVVKVDGNDGKIIRDF 309 (355)
Q Consensus 290 ~~~~~v~~~~~~~g~~~~~~ 309 (355)
.+.|..+|.++++.+..+
T Consensus 392 --s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 392 --TQTLHIYDAATGEELRSV 409 (426)
T ss_dssp --TTEEEEEETTTCCEEEEE
T ss_pred --CCeEEEEECCCCCEEEEe
Confidence 146999998788988877
No 110
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.16 E-value=4.7e-08 Score=95.59 Aligned_cols=227 Identities=9% Similarity=-0.046 Sum_probs=151.1
Q ss_pred CCeEEEEec-CCEEEEEEcCCCeeEEeeccCCCcccCeEECCCCC-EEEEeCCCcEEEEcC---CC--eEEEcCCcCCcc
Q 018474 63 KGALYTATR-DGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGG-VILCDNEKGLLKVTE---EG--VEAIVPDASFTN 135 (355)
Q Consensus 63 ~g~l~~~~~-~g~i~~~~~~~g~~~~~~~~~~~p~~gl~~d~~g~-L~v~~~~~gl~~~~~---~g--~~~~~~~~~~~~ 135 (355)
++.+|+... ++.|..+|..+++.......+..|+ +++++++|+ +|++...+.+..+|. ++ +..+... ..|.
T Consensus 166 ~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~~p~-~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G-~~P~ 243 (567)
T 1qks_A 166 ENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYAVH-ISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIG-SEAR 243 (567)
T ss_dssp GGEEEEEETTTTEEEEEETTTCCEEEEEECSSCEE-EEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECC-SEEE
T ss_pred CceEEEEeCCCCeEEEEECCCCeEEEEEeCCCCcc-ceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecC-CCCc
Confidence 567887765 6899999998887765455566799 999999996 788876566888884 44 3334332 5799
Q ss_pred cEEEc----cCC-cEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeec-cc-----------cccccEEEe
Q 018474 136 DVIAA----SDG-TLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHE-GF-----------YFANGIALS 198 (355)
Q Consensus 136 ~l~~d----~dG-~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~-~~-----------~~pngi~~~ 198 (355)
+++++ +|| .+|+++.. .+.+..+|..+.+...... .. ....++..+
T Consensus 244 ~ia~s~~~~pDGk~l~v~n~~-----------------~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s 306 (567)
T 1qks_A 244 SIETSKMEGWEDKYAIAGAYW-----------------PPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILAS 306 (567)
T ss_dssp EEEECCSTTCTTTEEEEEEEE-----------------TTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEEC
T ss_pred eeEEccccCCCCCEEEEEEcc-----------------CCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEc
Confidence 99999 698 68888643 4578888887776543221 10 123468888
Q ss_pred CCCCEEEEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCCE-EEEeecCCchhhHhhhcchhHHHHHHhc
Q 018474 199 KNEDFVVVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSF-WIGLIKMNQTGVRAIQKCREKWELLDAY 277 (355)
Q Consensus 199 ~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~l-wv~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (355)
+++..++++....+.|+.++....+.-....+ ....++.++.+|++|++ |+++...
T Consensus 307 ~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i--~~~~~~~d~~~~pdgr~~~va~~~s--------------------- 363 (567)
T 1qks_A 307 HYRPEFIVNVKETGKILLVDYTDLNNLKTTEI--SAERFLHDGGLDGSHRYFITAANAR--------------------- 363 (567)
T ss_dssp SSSSEEEEEETTTTEEEEEETTCSSEEEEEEE--ECCSSEEEEEECTTSCEEEEEEGGG---------------------
T ss_pred CCCCEEEEEecCCCeEEEEecCCCccceeeee--eccccccCceECCCCCEEEEEeCCC---------------------
Confidence 88887888877788999999754321111111 12335778889999985 5555431
Q ss_pred cchhhcccCCCCCCceEEEEEeCCCCeEEEEEEC-CCCCccc-ceeEEEEe-CCEEEEee-cCCCeEEEeeCCC
Q 018474 278 PGLISLLLPMGSDAGARVVKVDGNDGKIIRDFND-PDATYIS-FVTSAAEF-DGNLYLAS-LQSNFIGILPLDG 347 (355)
Q Consensus 278 ~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~-~~g~~~~-~~~~~~~~-~g~L~v~~-~~~~~i~~~~~~~ 347 (355)
+.|..+|.++++....+.. ... ... ....+... .+.+|+.+ ..++.|.+++.++
T Consensus 364 ---------------n~V~ViD~~t~kl~~~i~vgg~~-Phpg~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~~ 421 (567)
T 1qks_A 364 ---------------NKLVVIDTKEGKLVAIEDTGGQT-PHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDP 421 (567)
T ss_dssp ---------------TEEEEEETTTTEEEEEEECSSSS-BCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred ---------------CeEEEEECCCCcEEEEEeccCcC-CCCccceeeECCCCCcEEEeCCCCCCeEEEecCCC
Confidence 3588899878887776644 221 111 11122222 47899865 5668999999876
No 111
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.15 E-value=3.1e-07 Score=83.07 Aligned_cols=237 Identities=14% Similarity=0.103 Sum_probs=153.3
Q ss_pred CCCCCCCceEEEeeCCCeEEEEecCCEEEEEEcCCCeeEEee-ccCCCcccCeEECCCCCEEEEeCCCc-EEEEc-CCC-
Q 018474 48 EGCVNHPEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWK-HIDSQSLLGLTTTKDGGVILCDNEKG-LLKVT-EEG- 123 (355)
Q Consensus 48 ~~~~~~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~~-~~~~~p~~gl~~d~~g~L~v~~~~~g-l~~~~-~~g- 123 (355)
.|.-..-.++.+.+.+..+..++.++.|..+|..+++..... ....... .+++.++|+.+++....| +..++ .++
T Consensus 77 ~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~-~~~~spdg~~l~~g~~dg~v~i~~~~~~~ 155 (321)
T 3ow8_A 77 EGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAW-TLAFSPDSQYLATGTHVGKVNIFGVESGK 155 (321)
T ss_dssp CCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCC-CEEECTTSSEEEEECTTSEEEEEETTTCS
T ss_pred ccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEE-EEEECCCCCEEEEEcCCCcEEEEEcCCCc
Confidence 344445567778866667778888999999999888654332 2234566 899999998776655555 45555 344
Q ss_pred -eEEEcCCcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeecc-ccccccEEEeCCC
Q 018474 124 -VEAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEG-FYFANGIALSKNE 201 (355)
Q Consensus 124 -~~~~~~~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~-~~~pngi~~~~dg 201 (355)
...+......+.+++++++|++.++.+. .+.+..||..+++......+ ......++++||+
T Consensus 156 ~~~~~~~~~~~v~~~~~spdg~~lasg~~-----------------dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~ 218 (321)
T 3ow8_A 156 KEYSLDTRGKFILSIAYSPDGKYLASGAI-----------------DGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDS 218 (321)
T ss_dssp EEEEEECSSSCEEEEEECTTSSEEEEEET-----------------TSCEEEEETTTTEEEEEECCCSSCCCEEEECTTS
T ss_pred eeEEecCCCceEEEEEECCCCCEEEEEcC-----------------CCeEEEEECCCCcEEEEEcccCCceeEEEEcCCC
Confidence 3334443367888999999987765433 56788899888865433333 2335789999999
Q ss_pred CEEEEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCCEEEEeecCCchhhHhhhcchhHHHHHHhccchh
Q 018474 202 DFVVVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLI 281 (355)
Q Consensus 202 ~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (355)
+.+ ++....+.|..|+++... ....+. ........+.+.++|++.++....
T Consensus 219 ~~l-~s~s~dg~i~iwd~~~~~--~~~~~~-~h~~~v~~~~~sp~~~~l~s~s~D------------------------- 269 (321)
T 3ow8_A 219 QLL-VTASDDGYIKIYDVQHAN--LAGTLS-GHASWVLNVAFCPDDTHFVSSSSD------------------------- 269 (321)
T ss_dssp CEE-EEECTTSCEEEEETTTCC--EEEEEC-CCSSCEEEEEECTTSSEEEEEETT-------------------------
T ss_pred CEE-EEEcCCCeEEEEECCCcc--eeEEEc-CCCCceEEEEECCCCCEEEEEeCC-------------------------
Confidence 854 555567789999975432 122222 223334567889999877766542
Q ss_pred hcccCCCCCCceEEEEEeCCCCeEEEEEECCCCCcccceeEEEEeC-CEEEEeecCCCeEEEeeCC
Q 018474 282 SLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFD-GNLYLASLQSNFIGILPLD 346 (355)
Q Consensus 282 ~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~-g~L~v~~~~~~~i~~~~~~ 346 (355)
+.|..+|..+++.+..+..+.+ .+..+.... ++..++.-....|...+.+
T Consensus 270 -----------~~v~iwd~~~~~~~~~~~~h~~----~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 270 -----------KSVKVWDVGTRTCVHTFFDHQD----QVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp -----------SCEEEEETTTTEEEEEECCCSS----CEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred -----------CcEEEEeCCCCEEEEEEcCCCC----cEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 3477778757887777766544 455566543 4444444446677777653
No 112
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.12 E-value=1.9e-08 Score=91.18 Aligned_cols=154 Identities=8% Similarity=-0.050 Sum_probs=96.2
Q ss_pred eEEEeeCCCeEEEE-ecCCEEEEEEcCCCeeEEeeccCC--CcccCeEECCCCC-EEEEeCC-CcEEEEcC-CC--eEEE
Q 018474 56 DVSVVVSKGALYTA-TRDGWVKYFILHNETLVNWKHIDS--QSLLGLTTTKDGG-VILCDNE-KGLLKVTE-EG--VEAI 127 (355)
Q Consensus 56 ~i~~d~~~g~l~~~-~~~g~i~~~~~~~g~~~~~~~~~~--~p~~gl~~d~~g~-L~v~~~~-~gl~~~~~-~g--~~~~ 127 (355)
++++. .++.+|+. ..++.|+.+|..+++......... .|. +++++++|+ +|++... +.++.++. ++ ...+
T Consensus 4 g~~~~-~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~-~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~ 81 (349)
T 1jmx_B 4 GPALK-AGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPG-TAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHA 81 (349)
T ss_dssp CCCCC-TTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSC-EEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred ccccc-CCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCc-eeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEE
Confidence 34455 56667764 568999999998887654444344 688 999999997 7888754 34778884 56 3333
Q ss_pred cCC------cCCcccEEEccCC-cEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEE---EeeccccccccEEE
Q 018474 128 VPD------ASFTNDVIAASDG-TLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETT---VLHEGFYFANGIAL 197 (355)
Q Consensus 128 ~~~------~~~~~~l~~d~dG-~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~---~~~~~~~~pngi~~ 197 (355)
... ...++++++++|| .+|+++......... +. ...+.++.||.++++.. ........+.++++
T Consensus 82 ~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~--~~----~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 155 (349)
T 1jmx_B 82 NLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDH--YV----VKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRA 155 (349)
T ss_dssp ESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSC--EE----ECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEE
T ss_pred EcccccccccccccceEECCCCCEEEEEcccccccccc--cc----cCCCeEEEEECCCccccceeeeccCCCcccceeE
Confidence 321 1348999999999 577765220000000 00 01357889998764321 11222335778889
Q ss_pred eCCCCEEEEEeCCCCeEEEEEeCC
Q 018474 198 SKNEDFVVVCESWKFRCRRYWLKG 221 (355)
Q Consensus 198 ~~dg~~l~v~~~~~~~i~~~~~~~ 221 (355)
+|||+ +|++. +.|++++++.
T Consensus 156 s~dg~-l~~~~---~~i~~~d~~~ 175 (349)
T 1jmx_B 156 ADDGS-LYVAG---PDIYKMDVKT 175 (349)
T ss_dssp CTTSC-EEEES---SSEEEECTTT
T ss_pred CCCCc-EEEcc---CcEEEEeCCC
Confidence 99999 88853 3488888754
No 113
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.12 E-value=1.7e-08 Score=87.07 Aligned_cols=152 Identities=16% Similarity=0.056 Sum_probs=107.2
Q ss_pred ecCCCCCCCceEEEeeCCCeEEEEec-CCEEEEEEcCCCeeEEeeccCCCcccCeEECCCCCEEEEeCCCcEEEEcC-CC
Q 018474 46 LGEGCVNHPEDVSVVVSKGALYTATR-DGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVTE-EG 123 (355)
Q Consensus 46 ~~~~~~~~p~~i~~d~~~g~l~~~~~-~g~i~~~~~~~g~~~~~~~~~~~p~~gl~~d~~g~L~v~~~~~gl~~~~~-~g 123 (355)
+..+.-.-+|+++.+ ++.||+.+. ++.++.+|+++.+...-...++.+. |++.| .++||+++....|..+|+ +.
T Consensus 59 ~~l~~~~fgeGi~~~--~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~Gw-glt~d-g~~L~vSdgs~~l~~iDp~t~ 134 (243)
T 3mbr_X 59 AEVPPPYFGAGIVAW--RDRLIQLTWRNHEGFVYDLATLTPRARFRYPGEGW-ALTSD-DSHLYMSDGTAVIRKLDPDTL 134 (243)
T ss_dssp EECCTTCCEEEEEEE--TTEEEEEESSSSEEEEEETTTTEEEEEEECSSCCC-EEEEC-SSCEEEECSSSEEEEECTTTC
T ss_pred EeCCCCcceeEEEEe--CCEEEEEEeeCCEEEEEECCcCcEEEEEeCCCCce-EEeeC-CCEEEEECCCCeEEEEeCCCC
Confidence 333333456888887 688998874 7899999998887654333445567 78776 468999997667888885 44
Q ss_pred --eEEEcCC-----cCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeec---------
Q 018474 124 --VEAIVPD-----ASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHE--------- 187 (355)
Q Consensus 124 --~~~~~~~-----~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~--------- 187 (355)
...+... ..++|.+... +|.||+.... +..|.++||+++++.....
T Consensus 135 ~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~-----------------s~~I~vIDp~tG~V~~~idl~~l~~~~~ 196 (243)
T 3mbr_X 135 QQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWL-----------------TSRIARIDPASGKVVAWIDLQALVPDAD 196 (243)
T ss_dssp CEEEEEECEETTEECCCEEEEEEE-TTEEEEEETT-----------------TTEEEEECTTTCBEEEEEECGGGSTTTT
T ss_pred eEEEEEEEccCCcccccceeeEEe-CCEEEEEECC-----------------CCeEEEEECCCCCEEEEEECCcCccccc
Confidence 3333221 1567777655 7899988754 4589999999998764432
Q ss_pred -----cccccccEEEeCCCCEEEEEeCCCCeEEEEEe
Q 018474 188 -----GFYFANGIALSKNEDFVVVCESWKFRCRRYWL 219 (355)
Q Consensus 188 -----~~~~pngi~~~~dg~~l~v~~~~~~~i~~~~~ 219 (355)
....+||||++|+++.+|++.-.=..++.+.+
T Consensus 197 ~~~~~~~~vlNGIA~d~~~~~lfVTGK~wp~~~~v~~ 233 (243)
T 3mbr_X 197 ALTDSTNDVLNGIAFDAEHDRLFVTGKRWPMLYEIRL 233 (243)
T ss_dssp SCCCTTSSCEEEEEEETTTTEEEEEETTCSEEEEEEE
T ss_pred cccCCcCCceEEEEEcCCCCEEEEECCCCCcEEEEEE
Confidence 12367999999999999999754445655554
No 114
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=99.11 E-value=1.1e-07 Score=87.51 Aligned_cols=232 Identities=10% Similarity=-0.010 Sum_probs=151.6
Q ss_pred ceEecCCCCCCCceEEEeeCCCeEEEEecC---C---EEEEEEcC--------CCee-EEeec--cCC---CcccCeEEC
Q 018474 43 LTKLGEGCVNHPEDVSVVVSKGALYTATRD---G---WVKYFILH--------NETL-VNWKH--IDS---QSLLGLTTT 102 (355)
Q Consensus 43 ~~~~~~~~~~~p~~i~~d~~~g~l~~~~~~---g---~i~~~~~~--------~g~~-~~~~~--~~~---~p~~gl~~d 102 (355)
.+.++. -.-|.++++|..++++|++... | .+..++.. ++++ +.|.. .+. .++ ++.+|
T Consensus 19 g~y~p~--n~~P~gv~vd~~~gRiFvt~PR~~~gvp~TL~~v~~~~~~~~~~~~p~ll~PYP~w~~~~~lvsV~-~v~iD 95 (381)
T 3q6k_A 19 GSYNPD--NMISTAFAYDAEGEKLFLAVPRKLPRVPYTLAEVDTKNSLGVKGKHSPLLNKFSGHKTGKELTSIY-QPVID 95 (381)
T ss_dssp TSSCGG--GCCCCEEEEETTTTEEEEECCTTSTTCSCSEEEEEHHHHTTCTTCSSCCBEECTTCSSSCSSSCEE-EEEEC
T ss_pred CCcccC--ccceeeeeeecCCCcEEEEeCCCCCCCCcEEEEEeCCCCcccccCCcccccCCCCCccccceEEee-EEEEc
Confidence 344444 3568899994257889998753 2 45566542 3355 66643 122 367 88999
Q ss_pred CCCCEEEEeCC-------------C---cEEEEc-C-C--C-eEEEcCC--c----CCcccEEEc-c-------CCcEEE
Q 018474 103 KDGGVILCDNE-------------K---GLLKVT-E-E--G-VEAIVPD--A----SFTNDVIAA-S-------DGTLYF 147 (355)
Q Consensus 103 ~~g~L~v~~~~-------------~---gl~~~~-~-~--g-~~~~~~~--~----~~~~~l~~d-~-------dG~ly~ 147 (355)
+.|+|||.|.+ . .|+.+| . + . ++++.-+ . .+.+++++| . ++.+|+
T Consensus 96 ~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYI 175 (381)
T 3q6k_A 96 DCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYI 175 (381)
T ss_dssp TTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEE
T ss_pred CCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEE
Confidence 99999999865 1 277888 4 5 5 5554322 1 678999999 2 457999
Q ss_pred EeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeecc-------------------ccccccEEEeCC----CCEE
Q 018474 148 TVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEG-------------------FYFANGIALSKN----EDFV 204 (355)
Q Consensus 148 ~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~-------------------~~~pngi~~~~d----g~~l 204 (355)
+|+. ..+|.+||.++++...+.+. ....+||+++|+ ++.|
T Consensus 176 tD~~-----------------~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~L 238 (381)
T 3q6k_A 176 TNFL-----------------RGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPA 238 (381)
T ss_dssp EETT-----------------TTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEE
T ss_pred EcCC-----------------CCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEE
Confidence 9976 45788888777654433311 014578999998 8999
Q ss_pred EEEeCCCCeEEEEEe---CCCC-CcceeEecccCCCCcC--ceEEC-CCCCEEEEeecCCchhhHhhhcchhHHHHHHhc
Q 018474 205 VVCESWKFRCRRYWL---KGDR-AGILDAFIENLPGGPD--NINLA-PDGSFWIGLIKMNQTGVRAIQKCREKWELLDAY 277 (355)
Q Consensus 205 ~v~~~~~~~i~~~~~---~~~~-~~~~~~~~~~~~g~p~--~i~~d-~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (355)
|++-....+++++.. .... ...++.+.+ .+...+ +++.| ++|++|++....
T Consensus 239 Yf~plss~~ly~V~T~~L~~~~~~~~v~~~G~-kg~~s~~~~~~~D~~~G~ly~~~~~~--------------------- 296 (381)
T 3q6k_A 239 YYLAGSAIKVYSVNTKELKQKGGKLNPELLGN-RGKYNDAIALAYDPKTKVIFFAEANT--------------------- 296 (381)
T ss_dssp EEEESSCSEEEEEEHHHHSSTTCCCCCEEEEE-CCTTCCEEEEEECTTTCEEEEEESSS---------------------
T ss_pred EEEECCCCcEEEEEHHHhhCcchhhceEEeee-cCCCCCcceEEEeCCCCeEEEEeccC---------------------
Confidence 999988778988873 2222 233333332 221234 45676 789999998652
Q ss_pred cchhhcccCCCCCCceEEEEEeCCCC------eEEEEEECCCCCcccceeEEEEe-CCEEEEeec
Q 018474 278 PGLISLLLPMGSDAGARVVKVDGNDG------KIIRDFNDPDATYISFVTSAAEF-DGNLYLASL 335 (355)
Q Consensus 278 ~~~~~~~~~~~~~~~~~v~~~~~~~g------~~~~~~~~~~g~~~~~~~~~~~~-~g~L~v~~~ 335 (355)
.+|.+.++ ++ .....++++ . ...+..+..+ +|+||+.+.
T Consensus 297 ---------------~aI~~w~~-~~~~~~~~n~~~l~~d~-~--l~~pd~~~i~~~g~Lwv~sn 342 (381)
T 3q6k_A 297 ---------------KQVSCWNT-QKMPLRMKNTDVVYTSS-R--FVFGTDISVDSKGGLWFMSN 342 (381)
T ss_dssp ---------------SEEEEEET-TSCSBCGGGEEEEEECT-T--CCSEEEEEECTTSCEEEEEC
T ss_pred ---------------CeEEEEeC-CCCccccCceEEEEECC-C--ccccCeEEECCCCeEEEEEC
Confidence 47999999 66 335556676 3 4467777764 699999874
No 115
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.11 E-value=1.3e-08 Score=88.77 Aligned_cols=145 Identities=16% Similarity=0.123 Sum_probs=103.4
Q ss_pred CCCceEEEeeCCCeEEEEec-CCEEEEEEcCCCeeEEeeccCCCcccCeEECCCCCEEEEeCCCcEEEEcC-CC--eEEE
Q 018474 52 NHPEDVSVVVSKGALYTATR-DGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVTE-EG--VEAI 127 (355)
Q Consensus 52 ~~p~~i~~d~~~g~l~~~~~-~g~i~~~~~~~g~~~~~~~~~~~p~~gl~~d~~g~L~v~~~~~gl~~~~~-~g--~~~~ 127 (355)
.-.|+++.+ ++.||+.+. ++.++.+|+++.+...-....+... |++.| .++||+++....+..+|+ +. ...+
T Consensus 96 ~FgeGit~~--g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~eGw-GLt~D-g~~L~vSdGs~~l~~iDp~T~~v~~~I 171 (268)
T 3nok_A 96 IFAEGLASD--GERLYQLTWTEGLLFTWSGMPPQRERTTRYSGEGW-GLCYW-NGKLVRSDGGTMLTFHEPDGFALVGAV 171 (268)
T ss_dssp CCEEEEEEC--SSCEEEEESSSCEEEEEETTTTEEEEEEECSSCCC-CEEEE-TTEEEEECSSSEEEEECTTTCCEEEEE
T ss_pred cceeEEEEe--CCEEEEEEccCCEEEEEECCcCcEEEEEeCCCcee-EEecC-CCEEEEECCCCEEEEEcCCCCeEEEEE
Confidence 345788886 678998874 6889999998887654333445567 88887 468999986566888885 44 3333
Q ss_pred cC--C---cCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeecc--------------
Q 018474 128 VP--D---ASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEG-------------- 188 (355)
Q Consensus 128 ~~--~---~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~-------------- 188 (355)
.- . ..++|.+... +|.||+.... ...|.++||+++++.....-
T Consensus 172 ~V~~~g~~v~~lNeLe~~-dG~lyanvw~-----------------s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~ 233 (268)
T 3nok_A 172 QVKLRGQPVELINELECA-NGVIYANIWH-----------------SSDVLEIDPATGTVVGVIDASALTRAVAGQVTNP 233 (268)
T ss_dssp ECEETTEECCCEEEEEEE-TTEEEEEETT-----------------CSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCT
T ss_pred EeCCCCcccccccccEEe-CCEEEEEECC-----------------CCeEEEEeCCCCcEEEEEECCCCcccccccccCc
Confidence 22 1 1577888766 8899998754 45899999999987644321
Q ss_pred ccccccEEEeCCCCEEEEEeCCCCeEEEEE
Q 018474 189 FYFANGIALSKNEDFVVVCESWKFRCRRYW 218 (355)
Q Consensus 189 ~~~pngi~~~~dg~~l~v~~~~~~~i~~~~ 218 (355)
...+||||++|+++.+|++.-.=..++.+.
T Consensus 234 ~~vlNGIA~dp~~~rlfVTGK~Wp~~~ev~ 263 (268)
T 3nok_A 234 EAVLNGIAVEPGSGRIFMTGKLWPRLFEVR 263 (268)
T ss_dssp TCCEEEEEECTTTCCEEEEETTCSEEEEEE
T ss_pred CCceEEEEEcCCCCEEEEeCCCCCceEEEE
Confidence 136899999999999999875434455443
No 116
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.10 E-value=4.2e-08 Score=95.93 Aligned_cols=245 Identities=15% Similarity=0.122 Sum_probs=152.5
Q ss_pred EecCCCCCCCceEEEeeCCCeEEEEecCCEEEEEEcC--CCeeEEeeccCCCcccCeEEC----CCCC-EEEEeCC-CcE
Q 018474 45 KLGEGCVNHPEDVSVVVSKGALYTATRDGWVKYFILH--NETLVNWKHIDSQSLLGLTTT----KDGG-VILCDNE-KGL 116 (355)
Q Consensus 45 ~~~~~~~~~p~~i~~d~~~g~l~~~~~~g~i~~~~~~--~g~~~~~~~~~~~p~~gl~~d----~~g~-L~v~~~~-~gl 116 (355)
++..| ..|++++++++++.+|+++.++.|..+|.. +++...-...+..|. +++++ ++|+ +|+++.. +.+
T Consensus 192 ~i~~g--~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~P~-~ia~s~~~~pDGk~l~v~n~~~~~v 268 (567)
T 1qks_A 192 VLDTG--YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEAR-SIETSKMEGWEDKYAIAGAYWPPQY 268 (567)
T ss_dssp EEECS--SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEE-EEEECCSTTCTTTEEEEEEEETTEE
T ss_pred EEeCC--CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCCCc-eeEEccccCCCCCEEEEEEccCCeE
Confidence 44544 578999999888899999999999999985 555443334566799 99999 5885 8888755 446
Q ss_pred EEEc-CCC--eEEEcCCc-----------CCcccEEEccCCc-EEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCe
Q 018474 117 LKVT-EEG--VEAIVPDA-----------SFTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKE 181 (355)
Q Consensus 117 ~~~~-~~g--~~~~~~~~-----------~~~~~l~~d~dG~-ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~ 181 (355)
..+| .+. ++.+.... ..+.+++.++++. ++++... .|.++.+|..+.+
T Consensus 269 ~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~-----------------~g~v~~vd~~~~~ 331 (567)
T 1qks_A 269 VIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKE-----------------TGKILLVDYTDLN 331 (567)
T ss_dssp EEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETT-----------------TTEEEEEETTCSS
T ss_pred EEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecC-----------------CCeEEEEecCCCc
Confidence 6667 344 44443211 1345666777664 4443322 5678888875543
Q ss_pred EEEe--eccccccccEEEeCCCCEEEEEeCCCCeEEEEEeCCCCCcceeEec-ccCCCCc-CceE-ECCC-CCEEEEeec
Q 018474 182 TTVL--HEGFYFANGIALSKNEDFVVVCESWKFRCRRYWLKGDRAGILDAFI-ENLPGGP-DNIN-LAPD-GSFWIGLIK 255 (355)
Q Consensus 182 ~~~~--~~~~~~pngi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~g~p-~~i~-~d~~-G~lwv~~~~ 255 (355)
.... .....++.++.+++||+++|++....+.|.++|.+..+.... .-. ...| .| .+.. ++++ |.+|++...
T Consensus 332 ~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~-i~vgg~~P-hpg~g~~~~~p~~g~v~~t~~~ 409 (567)
T 1qks_A 332 NLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAI-EDTGGQTP-HPGRGANFVHPTFGPVWATSHM 409 (567)
T ss_dssp EEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEE-EECSSSSB-CCTTCEEEEETTTEEEEEEEBS
T ss_pred cceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEE-EeccCcCC-CCccceeeECCCCCcEEEeCCC
Confidence 2111 123356788999999999999998899999999864322111 111 1111 12 3543 4665 679987653
Q ss_pred CCchhhHhhhcchhHHHHHHhccchhhcccCCCCCCceEEEEEeCCC-------CeEEEEEECCCCCcccceeEEEEeCC
Q 018474 256 MNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGND-------GKIIRDFNDPDATYISFVTSAAEFDG 328 (355)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-------g~~~~~~~~~~g~~~~~~~~~~~~~g 328 (355)
+ .+.|..++... -+.+..+....+. ........++.
T Consensus 410 g-----------------------------------~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g--~~~i~~~p~~~ 452 (567)
T 1qks_A 410 G-----------------------------------DDSVALIGTDPEGHPDNAWKILDSFPALGGG--SLFIKTHPNSQ 452 (567)
T ss_dssp S-----------------------------------SSEEEEEECCTTTCTTTBTSEEEEEECSCSC--CCCEECCTTCS
T ss_pred C-----------------------------------CCeEEEecCCCCCCccccCEEEEEEecCCCC--CEEEEeCCCCC
Confidence 2 12477776522 3566777653221 11111223457
Q ss_pred EEEEeecC------CCeEEEeeCCCC
Q 018474 329 NLYLASLQ------SNFIGILPLDGP 348 (355)
Q Consensus 329 ~L~v~~~~------~~~i~~~~~~~~ 348 (355)
+||+.+.. ++.|+++++.+.
T Consensus 453 ~l~v~~~~~~~~~~~~~v~v~d~~~~ 478 (567)
T 1qks_A 453 YLYVDATLNPEAEISGSVAVFDIKAM 478 (567)
T ss_dssp EEEEECTTCSSHHHHTCEEEEEGGGC
T ss_pred eEEEecCCCCCcccCceEEEEECCcc
Confidence 89998843 359999998765
No 117
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.10 E-value=1.2e-07 Score=92.35 Aligned_cols=234 Identities=15% Similarity=0.188 Sum_probs=147.9
Q ss_pred CCCCCCceEEEeeCCCeEEEEecCCEEEEEEcCCCeeEEeeccCCCcccCeEECCCCCEEEEeCCCcEEEE-cCCC--eE
Q 018474 49 GCVNHPEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGGVILCDNEKGLLKV-TEEG--VE 125 (355)
Q Consensus 49 ~~~~~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~~~~~~~p~~gl~~d~~g~L~v~~~~~gl~~~-~~~g--~~ 125 (355)
+.-....++++.+++..+.++..+|.|..++....+...+......+. ++++.++|+..++....+.+++ +.++ +.
T Consensus 301 ~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~~~~~~~~~~v~-~~~~s~~g~~l~~~~~dg~v~~~~~~~~~~~ 379 (577)
T 2ymu_A 301 GHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQHLQTLTGHSSSVW-GVAFSPDGQTIASASDDKTVKLWNRNGQLLQ 379 (577)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEE-EEEECTTSSEEEEEETTSEEEEEETTCCEEE
T ss_pred cCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeeEEEeCCCCCEE-EEEECCCCCEEEEEeCCCEEEEEcCCCCEEE
Confidence 333455678888667778888889999999986666555443344567 8999999987665545565544 5555 55
Q ss_pred EEcCCcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeeccccccccEEEeCCCCEEE
Q 018474 126 AIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYFANGIALSKNEDFVV 205 (355)
Q Consensus 126 ~~~~~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~~~~pngi~~~~dg~~l~ 205 (355)
.+......+.+++++++|+..++.+. .+.+..||........+.........++++||++.+.
T Consensus 380 ~~~~~~~~v~~~~~s~dg~~l~~~~~-----------------d~~v~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~ 442 (577)
T 2ymu_A 380 TLTGHSSSVRGVAFSPDGQTIASASD-----------------DKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDDQTIA 442 (577)
T ss_dssp EEECCSSCEEEEEECTTSSCEEEEET-----------------TSEEEEECTTCCEEEEEECCSSCEEEEEECTTSSEEE
T ss_pred EecCCCCCeEEEEECCCCCEEEEEeC-----------------CCEEEEEeCCCCEEEEecCCCCCeEEEEECCCCCEEE
Confidence 55444467889999999976655322 4567788865544444443334456789999999665
Q ss_pred EEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCCEEEEeecCCchhhHhhhcchhHHHHHHhccchhhccc
Q 018474 206 VCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLL 285 (355)
Q Consensus 206 v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (355)
.+ ...+.|..|+.++. ....+. ........++++++|++.++....
T Consensus 443 ~~-~~d~~v~~w~~~~~---~~~~~~-~~~~~v~~~~~spd~~~las~~~d----------------------------- 488 (577)
T 2ymu_A 443 SA-SDDKTVKLWNRNGQ---LLQTLT-GHSSSVRGVAFSPDGQTIASASDD----------------------------- 488 (577)
T ss_dssp EE-ETTSEEEEEETTSC---EEEEEE-CCSSCEEEEEECTTSCEEEEEETT-----------------------------
T ss_pred EE-cCCCEEEEEECCCC---EEEEEc-CCCCCEEEEEEcCCCCEEEEEeCC-----------------------------
Confidence 55 45678888886542 222222 223334567899999887766442
Q ss_pred CCCCCCceEEEEEeCCCCeEEEEEECCCCCcccceeEEEEe-CCEEEEeecCCCeEEEeeCC
Q 018474 286 PMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF-DGNLYLASLQSNFIGILPLD 346 (355)
Q Consensus 286 ~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-~g~L~v~~~~~~~i~~~~~~ 346 (355)
+.|..++. +|+....+..+.+ .++.+... ++++.++......|..++++
T Consensus 489 -------~~i~iw~~-~~~~~~~~~~h~~----~v~~l~~s~dg~~l~s~~~dg~v~lwd~~ 538 (577)
T 2ymu_A 489 -------KTVKLWNR-NGQLLQTLTGHSS----SVRGVAFSPDGQTIASASDDKTVKLWNRN 538 (577)
T ss_dssp -------SEEEEEET-TSCEEEEEECCSS----CEEEEEECTTSSCEEEEETTSEEEEECTT
T ss_pred -------CEEEEEcC-CCCEEEEEeCCCC----CEEEEEEcCCCCEEEEEECcCEEEEEeCC
Confidence 34666787 8887777766544 34455544 24444433335556666643
No 118
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=99.08 E-value=3.8e-09 Score=100.55 Aligned_cols=189 Identities=13% Similarity=0.185 Sum_probs=113.7
Q ss_pred eEEEcCCcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeec---------ccccccc
Q 018474 124 VEAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHE---------GFYFANG 194 (355)
Q Consensus 124 ~~~~~~~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~---------~~~~png 194 (355)
+++++.....|.+|+++++|+|||++.. .++|+++++.+++.+.+.. +...+.|
T Consensus 19 ~~~~a~~l~~P~~~a~~pdG~l~V~e~~-----------------gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllg 81 (454)
T 1cru_A 19 KKVILSNLNKPHALLWGPDNQIWLTERA-----------------TGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLG 81 (454)
T ss_dssp EEEEECCCSSEEEEEECTTSCEEEEETT-----------------TCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEE
T ss_pred EEEEECCCCCceEEEEcCCCcEEEEEcC-----------------CCEEEEEECCCCcEeEEecCCccccccCCCCceeE
Confidence 5666666678999999999999999754 3479999876666654431 1233459
Q ss_pred EEEeCC---CCEEEEEeCC------------CCeEEEEEeCCC--CCcceeEecccCC----CCcCceEECCCCCEEEEe
Q 018474 195 IALSKN---EDFVVVCESW------------KFRCRRYWLKGD--RAGILDAFIENLP----GGPDNINLAPDGSFWIGL 253 (355)
Q Consensus 195 i~~~~d---g~~l~v~~~~------------~~~i~~~~~~~~--~~~~~~~~~~~~~----g~p~~i~~d~~G~lwv~~ 253 (355)
|+++|| +..||++.+. ..+|.|++.+.. .....+.+.+..+ -.+.+|++++||+|||+.
T Consensus 82 ia~~Pdf~~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~ 161 (454)
T 1cru_A 82 FAFHPDFKNNPYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTI 161 (454)
T ss_dssp EEECTTTTTSCEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEE
T ss_pred EEECCCcCcCCEEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEE
Confidence 999997 7789999864 358999998542 2333344443232 136779999999999998
Q ss_pred ecCCchhhHhhhcchhHHHHHHhccchhhcccCCCCCCceEEEEEeCCCCe-----------EEEEEECCCCCcccceeE
Q 018474 254 IKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGK-----------IIRDFNDPDATYISFVTS 322 (355)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~-----------~~~~~~~~~g~~~~~~~~ 322 (355)
....+...+.. ..+.- --+.|.......+-.....+.|+|+++ +|+ ..+.|.. | +.++..
T Consensus 162 Gd~~~~~~~~~-~~~~~---~~~~p~~~~~~aq~~~~~~G~IlRi~~-dG~ip~~Npf~~~~~~ei~a~--G--~RNp~g 232 (454)
T 1cru_A 162 GDQGRNQLAYL-FLPNQ---AQHTPTQQELNGKDYHTYMGKVLRLNL-DGSIPKDNPSFNGVVSHIYTL--G--HRNPQG 232 (454)
T ss_dssp CCTTTTSGGGT-TSCCC---TTCCCCHHHHHTTCCTTCSSEEEEECT-TSCCCTTCCEETTEECSEEEB--C--CSEEEE
T ss_pred CCCCCCCcccc-ccccc---cccccccccccccCCCCCCeeEEEEeC-CCCCCCCCCCCCCCcceEEEE--C--CCCcce
Confidence 65432110000 00000 000000000000000123478999999 887 3455544 3 235666
Q ss_pred EEEe-CCEEEEeecCCC
Q 018474 323 AAEF-DGNLYLASLQSN 338 (355)
Q Consensus 323 ~~~~-~g~L~v~~~~~~ 338 (355)
++.+ .|+||++....+
T Consensus 233 la~dp~G~L~~~d~g~~ 249 (454)
T 1cru_A 233 LAFTPNGKLLQSEQGPN 249 (454)
T ss_dssp EEECTTSCEEEEEECSS
T ss_pred EEECCCCCEEEEecCCC
Confidence 7766 489999987543
No 119
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=99.07 E-value=2.5e-09 Score=101.83 Aligned_cols=166 Identities=9% Similarity=0.132 Sum_probs=112.2
Q ss_pred ceEecCCCCCCCceEEEeeCCCeEEEEecCC-EEEEEEcCCCeeEEeecc---------CCCcccCeEECC----CCCEE
Q 018474 43 LTKLGEGCVNHPEDVSVVVSKGALYTATRDG-WVKYFILHNETLVNWKHI---------DSQSLLGLTTTK----DGGVI 108 (355)
Q Consensus 43 ~~~~~~~~~~~p~~i~~d~~~g~l~~~~~~g-~i~~~~~~~g~~~~~~~~---------~~~p~~gl~~d~----~g~L~ 108 (355)
.+.+..+ +..|.+|+++ .+|.+|++...+ +|+++++.+|+...+... .+.+. ||++++ ++.||
T Consensus 19 ~~~~a~~-l~~P~~~a~~-pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gll-gia~~Pdf~~~g~lY 95 (454)
T 1cru_A 19 KKVILSN-LNKPHALLWG-PDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLL-GFAFHPDFKNNPYIY 95 (454)
T ss_dssp EEEEECC-CSSEEEEEEC-TTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEE-EEEECTTTTTSCEEE
T ss_pred EEEEECC-CCCceEEEEc-CCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCcee-EEEECCCcCcCCEEE
Confidence 3556655 7899999999 677899998875 799998866766544321 23467 899998 78899
Q ss_pred EEeCC-------------CcEEEEc-C--CC-e---EEEcC----C-cCCcccEEEccCCcEEEEeCCCCCCC-ccccc-
Q 018474 109 LCDNE-------------KGLLKVT-E--EG-V---EAIVP----D-ASFTNDVIAASDGTLYFTVASTKYTP-TDFYK- 161 (355)
Q Consensus 109 v~~~~-------------~gl~~~~-~--~g-~---~~~~~----~-~~~~~~l~~d~dG~ly~~d~~~~~~~-~~~~~- 161 (355)
|+... ..|+++. . ++ + +.+.. . ..++++|++++||.||++........ .....
T Consensus 96 v~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd~~~~~~~~~~~~ 175 (454)
T 1cru_A 96 ISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGDQGRNQLAYLFLP 175 (454)
T ss_dssp EEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECCTTTTSGGGTTSC
T ss_pred EEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECCCCCCCccccccc
Confidence 98742 3577776 2 22 2 22221 1 15688999999999999865321100 00000
Q ss_pred -------------cccccCCCCeEEEEeCCCC-----------eEEEeeccccccccEEEeCCCCEEEEEeCCCC
Q 018474 162 -------------DMAEGKPYGQLRKYDPKLK-----------ETTVLHEGFYFANGIALSKNEDFVVVCESWKF 212 (355)
Q Consensus 162 -------------~~~~~~~~g~l~~~dp~~~-----------~~~~~~~~~~~pngi~~~~dg~~l~v~~~~~~ 212 (355)
.--.....|.|+|+++++. ..+.+..++.+|.|++++++|+ ||+++.+..
T Consensus 176 ~~~~~~p~~~~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a~G~RNp~gla~dp~G~-L~~~d~g~~ 249 (454)
T 1cru_A 176 NQAQHTPTQQELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTLGHRNPQGLAFTPNGK-LLQSEQGPN 249 (454)
T ss_dssp CCTTCCCCHHHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEEEBCCSEEEEEEECTTSC-EEEEEECSS
T ss_pred cccccccccccccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcceEEEECCCCcceEEECCCCC-EEEEecCCC
Confidence 0000123689999999765 4566778899999999999877 999997644
No 120
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.07 E-value=9.9e-08 Score=89.72 Aligned_cols=208 Identities=14% Similarity=0.080 Sum_probs=137.5
Q ss_pred CCCceEEEeeCCCeEEEEecCC---EEEEEEcCCCeeEEeeccCCCcccCeEECCCCC-EEEEeCC---CcEEEEcC-CC
Q 018474 52 NHPEDVSVVVSKGALYTATRDG---WVKYFILHNETLVNWKHIDSQSLLGLTTTKDGG-VILCDNE---KGLLKVTE-EG 123 (355)
Q Consensus 52 ~~p~~i~~d~~~g~l~~~~~~g---~i~~~~~~~g~~~~~~~~~~~p~~gl~~d~~g~-L~v~~~~---~gl~~~~~-~g 123 (355)
....++++.|++..++.++.++ .|+.+|..+++...+........ .+++.++|+ |+++... ..|+.++. ++
T Consensus 179 ~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~-~~~~spdg~~la~~~~~~g~~~i~~~d~~~~ 257 (415)
T 2hqs_A 179 QPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNG-APAFSPDGSKLAFALSKTGSLNLYVMDLASG 257 (415)
T ss_dssp SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEE-EEEECTTSSEEEEEECTTSSCEEEEEETTTC
T ss_pred CcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCccc-CEEEcCCCCEEEEEEecCCCceEEEEECCCC
Confidence 3466788987777777776653 89999998888776654445566 889999998 5544432 23888884 66
Q ss_pred -eEEEcCCcCCcccEEEccCCc-EEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeeccccccccEEEeCCC
Q 018474 124 -VEAIVPDASFTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYFANGIALSKNE 201 (355)
Q Consensus 124 -~~~~~~~~~~~~~l~~d~dG~-ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~~~~pngi~~~~dg 201 (355)
.+.+......+.+++++|||+ |+++... .....++.+|.++++.+.+.........++++|||
T Consensus 258 ~~~~l~~~~~~~~~~~~spdg~~l~~~s~~---------------~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdG 322 (415)
T 2hqs_A 258 QIRQVTDGRSNNTEPTWFPDSQNLAFTSDQ---------------AGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDG 322 (415)
T ss_dssp CEEECCCCSSCEEEEEECTTSSEEEEEECT---------------TSSCEEEEEETTSSCCEECCCSSSEEEEEEECTTS
T ss_pred CEEeCcCCCCcccceEECCCCCEEEEEECC---------------CCCcEEEEEECCCCCEEEEecCCCcccCeEECCCC
Confidence 655554445677889999996 6665432 11237999999888765544333445578999999
Q ss_pred CEEEEEeCC--CCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCCEEEEeecCCchhhHhhhcchhHHHHHHhccc
Q 018474 202 DFVVVCESW--KFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPG 279 (355)
Q Consensus 202 ~~l~v~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (355)
+.++++... ...|+.+++++.. ...+... .....+.++++|+..+.....
T Consensus 323 ~~l~~~~~~~g~~~i~~~d~~~~~---~~~l~~~--~~~~~~~~spdg~~l~~~s~~----------------------- 374 (415)
T 2hqs_A 323 KFMVMVSSNGGQQHIAKQDLATGG---VQVLSST--FLDETPSLAPNGTMVIYSSSQ----------------------- 374 (415)
T ss_dssp SEEEEEEECSSCEEEEEEETTTCC---EEECCCS--SSCEEEEECTTSSEEEEEEEE-----------------------
T ss_pred CEEEEEECcCCceEEEEEECCCCC---EEEecCC--CCcCCeEEcCCCCEEEEEEcC-----------------------
Confidence 988887654 3578889886532 2222211 134567889999854433321
Q ss_pred hhhcccCCCCCCceEEEEEeCCCCeEEEEEECCCC
Q 018474 280 LISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDA 314 (355)
Q Consensus 280 ~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g 314 (355)
.....|+.+|. +|+....+..+.|
T Consensus 375 ----------~~~~~l~~~d~-~g~~~~~l~~~~~ 398 (415)
T 2hqs_A 375 ----------GMGSVLNLVST-DGRFKARLPATDG 398 (415)
T ss_dssp ----------TTEEEEEEEET-TSCCEEECCCSSS
T ss_pred ----------CCccEEEEEEC-CCCcEEEeeCCCC
Confidence 11236888998 7877777766555
No 121
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.06 E-value=7.4e-07 Score=82.60 Aligned_cols=246 Identities=12% Similarity=0.056 Sum_probs=143.8
Q ss_pred EecCCCCCCCceEEEeeCCCeEEEEec----------CCEEEEEEcCCCeeEEeecc--------CCCcccCeEECCCCC
Q 018474 45 KLGEGCVNHPEDVSVVVSKGALYTATR----------DGWVKYFILHNETLVNWKHI--------DSQSLLGLTTTKDGG 106 (355)
Q Consensus 45 ~~~~~~~~~p~~i~~d~~~g~l~~~~~----------~g~i~~~~~~~g~~~~~~~~--------~~~p~~gl~~d~~g~ 106 (355)
.++.| ..| .+++.|+++.+|++.. ++.|..+|..+.+....... +..|. +++++++|+
T Consensus 62 ~i~~g--~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~-~~~~spDG~ 137 (373)
T 2mad_H 62 HVNGG--FLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSW-MNANTPNNA 137 (373)
T ss_pred EecCC--CCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCcc-ceEECCCCC
Confidence 45555 568 9999988899999863 46788999977665433222 24588 999999986
Q ss_pred -EEEEeCC--CcEEEEcCCC--eEE-EcCCcCCcccEEEccCC-cEEEEeCCCCCCCccccccccccCCCCeEEEEeCCC
Q 018474 107 -VILCDNE--KGLLKVTEEG--VEA-IVPDASFTNDVIAASDG-TLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKL 179 (355)
Q Consensus 107 -L~v~~~~--~gl~~~~~~g--~~~-~~~~~~~~~~l~~d~dG-~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~ 179 (355)
||++... +.+..+|.++ +.. +. .+..+.+.++| +.|++... .|.+..+|. +
T Consensus 138 ~l~v~n~~~~~~v~viD~t~~~~~~~i~----~~~~~~~~~~~~~~~~~~~~-----------------dg~~~~vd~-~ 195 (373)
T 2mad_H 138 DLLFFQFAAGPAVGLVVQGGSSDDQLLS----SPTCYHIHPGAPSTFYLLCA-----------------QGGLAKTDH-A 195 (373)
T ss_pred EEEEEecCCCCeEEEEECCCCEEeEEcC----CCceEEEEeCCCceEEEEcC-----------------CCCEEEEEC-C
Confidence 8888743 4577888223 333 22 22234444554 56665433 456777777 5
Q ss_pred CeEEEeec-----ccccc--ccEEEeCCCCEEEEEeCCCCeEEEEEeCCCCCcceeEe--cc----cCCCCcCc---eEE
Q 018474 180 KETTVLHE-----GFYFA--NGIALSKNEDFVVVCESWKFRCRRYWLKGDRAGILDAF--IE----NLPGGPDN---INL 243 (355)
Q Consensus 180 ~~~~~~~~-----~~~~p--ngi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~--~~----~~~g~p~~---i~~ 243 (355)
++...... ....| ....+.+++..+|+.. ..+.++.++..+........+ .. .....|.+ +.+
T Consensus 196 g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~ 274 (373)
T 2mad_H 196 GGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPV-YSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAY 274 (373)
T ss_pred CcEEEEEeccccccCCcceeecceeEecCCEEEEEc-CCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEE
Confidence 54431111 00111 1234566666566655 456888888754321111111 00 01113566 678
Q ss_pred CCCC-CEEEEeecCCchhhHhhhcchhHHHHHHhccchhhcccCCCCCCceEEEEEeCCCCeEEEEEECCCCCcccceeE
Q 018474 244 APDG-SFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTS 322 (355)
Q Consensus 244 d~~G-~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~ 322 (355)
+++| ++||+........ .....+.|..+|.++++.+..+.... .+..
T Consensus 275 s~d~~~lyV~~~~~~~~~---------------------------~~~~~~~V~VID~~t~~vv~~i~~g~-----~p~~ 322 (373)
T 2mad_H 275 LKSSDGIYLLTSEQSAWK---------------------------LHAAAKEVTSVTGLVGQTSSQISLGH-----DVDA 322 (373)
T ss_pred CCCCCEEEEEeccCCccc---------------------------ccCCCCeEEEEECCCCEEEEEEECCC-----CcCe
Confidence 8887 5899875310000 00112469999997788888886533 1233
Q ss_pred EE--EeCC-EEEEeecCCCeEEEeeCCCCC
Q 018474 323 AA--EFDG-NLYLASLQSNFIGILPLDGPE 349 (355)
Q Consensus 323 ~~--~~~g-~L~v~~~~~~~i~~~~~~~~~ 349 (355)
+. .++. .||+++..++.|.++++.+-.
T Consensus 323 i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~ 352 (373)
T 2mad_H 323 ISVAQDGGPDLYALSAGTEVLHIYDAGAGD 352 (373)
T ss_pred EEECCCCCeEEEEEcCCCCeEEEEECCCCC
Confidence 33 3345 577777789999999987644
No 122
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.05 E-value=1.9e-07 Score=90.88 Aligned_cols=219 Identities=14% Similarity=0.150 Sum_probs=141.5
Q ss_pred CCCCceEEEeeCCCeEEEEecCCEEEEEEcCCCeeEEeeccCCCcccCeEECCCCCEEEEeCCCc-EEEEcCCC--eEEE
Q 018474 51 VNHPEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGGVILCDNEKG-LLKVTEEG--VEAI 127 (355)
Q Consensus 51 ~~~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~~~~~~~p~~gl~~d~~g~L~v~~~~~g-l~~~~~~g--~~~~ 127 (355)
-....++++.+++..+.++..+|.|..++........+......+. ++++.++|+.+++...++ +..++.++ ++.+
T Consensus 344 ~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~~~~~~~~~~~~~v~-~~~~s~dg~~l~~~~~d~~v~~~~~~~~~~~~~ 422 (577)
T 2ymu_A 344 SSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVR-GVAFSPDGQTIASASDDKTVKLWNRNGQLLQTL 422 (577)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEETTCCEEEEEECCSSCEE-EEEECTTSSCEEEEETTSEEEEECTTCCEEEEE
T ss_pred CCCEEEEEECCCCCEEEEEeCCCEEEEEcCCCCEEEEecCCCCCeE-EEEECCCCCEEEEEeCCCEEEEEeCCCCEEEEe
Confidence 3455678888777778888889999888863333333333344567 899999998655544445 44555555 5555
Q ss_pred cCCcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeeccccccccEEEeCCCCEEEEE
Q 018474 128 VPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYFANGIALSKNEDFVVVC 207 (355)
Q Consensus 128 ~~~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~~~~pngi~~~~dg~~l~v~ 207 (355)
......+.++++++|++..++.+. .+.+..||..+.....+.........++++||++.+..+
T Consensus 423 ~~~~~~v~~~~~s~d~~~l~~~~~-----------------d~~v~~w~~~~~~~~~~~~~~~~v~~~~~spd~~~las~ 485 (577)
T 2ymu_A 423 TGHSSSVWGVAFSPDDQTIASASD-----------------DKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASA 485 (577)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEET-----------------TSEEEEEETTSCEEEEEECCSSCEEEEEECTTSCEEEEE
T ss_pred cCCCCCeEEEEECCCCCEEEEEcC-----------------CCEEEEEECCCCEEEEEcCCCCCEEEEEEcCCCCEEEEE
Confidence 544467888999999977665433 456888887655555544333445789999999965544
Q ss_pred eCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCCEEEEeecCCchhhHhhhcchhHHHHHHhccchhhcccCC
Q 018474 208 ESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPM 287 (355)
Q Consensus 208 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (355)
...+.|..|+.++. ..+.+. ........++++++|++.++....
T Consensus 486 -~~d~~i~iw~~~~~---~~~~~~-~h~~~v~~l~~s~dg~~l~s~~~d------------------------------- 529 (577)
T 2ymu_A 486 -SDDKTVKLWNRNGQ---LLQTLT-GHSSSVRGVAFSPDGQTIASASDD------------------------------- 529 (577)
T ss_dssp -ETTSEEEEEETTSC---EEEEEE-CCSSCEEEEEECTTSSCEEEEETT-------------------------------
T ss_pred -eCCCEEEEEcCCCC---EEEEEe-CCCCCEEEEEEcCCCCEEEEEECc-------------------------------
Confidence 45677888886542 222222 223334567899999877665431
Q ss_pred CCCCceEEEEEeCCCCeEEEEEECCCCCcccceeEEEEe-CCEEEEe
Q 018474 288 GSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF-DGNLYLA 333 (355)
Q Consensus 288 ~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-~g~L~v~ 333 (355)
+.|..+|. +|+.+..+..+.+ .++.+... +|+..++
T Consensus 530 -----g~v~lwd~-~~~~~~~~~~h~~----~v~~~~fs~dg~~l~s 566 (577)
T 2ymu_A 530 -----KTVKLWNR-NGQLLQTLTGHSS----SVWGVAFSPDGQTIAS 566 (577)
T ss_dssp -----SEEEEECT-TSCEEEEEECCSS----CEEEEEECTTSSCEEE
T ss_pred -----CEEEEEeC-CCCEEEEEcCCCC----CEEEEEEcCCCCEEEE
Confidence 45777788 8988888877654 45556654 3444443
No 123
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.04 E-value=8.8e-08 Score=82.66 Aligned_cols=159 Identities=14% Similarity=0.060 Sum_probs=111.3
Q ss_pred CCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeeccccccccEEEeCCCCEEEEEeCCC
Q 018474 132 SFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYFANGIALSKNEDFVVVCESWK 211 (355)
Q Consensus 132 ~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~~~~pngi~~~~dg~~l~v~~~~~ 211 (355)
.+..+|.+++ ++||+++.. .....|.++|++++++.....-...+.|..++.+++.+|+.....
T Consensus 21 ~ftqGL~~~~-~~LyestG~---------------~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~ 84 (243)
T 3mbr_X 21 AFTEGLFYLR-GHLYESTGE---------------TGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRN 84 (243)
T ss_dssp CCEEEEEEET-TEEEEEECC---------------TTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSS
T ss_pred cccccEEEEC-CEEEEECCC---------------CCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeC
Confidence 7888999986 899998764 113479999999998765443323333333444567899999889
Q ss_pred CeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCCEEEEeecCCchhhHhhhcchhHHHHHHhccchhhcccCCCCCC
Q 018474 212 FRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDA 291 (355)
Q Consensus 212 ~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (355)
+.+++||.+.. .....+. .++.+-+++.|. +++|+++..
T Consensus 85 ~~v~v~D~~tl--~~~~ti~--~~~~Gwglt~dg-~~L~vSdgs------------------------------------ 123 (243)
T 3mbr_X 85 HEGFVYDLATL--TPRARFR--YPGEGWALTSDD-SHLYMSDGT------------------------------------ 123 (243)
T ss_dssp SEEEEEETTTT--EEEEEEE--CSSCCCEEEECS-SCEEEECSS------------------------------------
T ss_pred CEEEEEECCcC--cEEEEEe--CCCCceEEeeCC-CEEEEECCC------------------------------------
Confidence 99999997542 2222232 234456777663 589999743
Q ss_pred ceEEEEEeCCCCeEEEEEECC-CCCcccceeEEEEeCCEEEEeecCCCeEEEeeCCCC
Q 018474 292 GARVVKVDGNDGKIIRDFNDP-DATYISFVTSAAEFDGNLYLASLQSNFIGILPLDGP 348 (355)
Q Consensus 292 ~~~v~~~~~~~g~~~~~~~~~-~g~~~~~~~~~~~~~g~L~v~~~~~~~i~~~~~~~~ 348 (355)
+.|..+||++.+....+... +|........+...+|+||+....++.|.+++..+-
T Consensus 124 -~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyanvw~s~~I~vIDp~tG 180 (243)
T 3mbr_X 124 -AVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLANVWLTSRIARIDPASG 180 (243)
T ss_dssp -SEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTTTEEEEECTTTC
T ss_pred -CeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEEEECCCCeEEEEECCCC
Confidence 36999999778888877653 343344455555668999999999999999987653
No 124
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.00 E-value=2.8e-07 Score=86.62 Aligned_cols=162 Identities=11% Similarity=0.072 Sum_probs=104.7
Q ss_pred CEEEEEEcCCCeeEEeeccCCCcccCeEECCCCC-EEEEeCCC---cEEEEc-CCC-eEEEcCCcCCcccEEEccCCc-E
Q 018474 73 GWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGG-VILCDNEK---GLLKVT-EEG-VEAIVPDASFTNDVIAASDGT-L 145 (355)
Q Consensus 73 g~i~~~~~~~g~~~~~~~~~~~p~~gl~~d~~g~-L~v~~~~~---gl~~~~-~~g-~~~~~~~~~~~~~l~~d~dG~-l 145 (355)
+.|+.+|...+....+........ ++++.++|+ |..+...+ .++.++ .+| .+.+......+.+++++|||+ |
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~~~v~-~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~~l 237 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSPQPLM-SPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKL 237 (415)
T ss_dssp EEEEEEETTSCSCEEEEEESSCEE-EEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEECTTSSEE
T ss_pred ceEEEEcCCCCCCEEEeCCCCcce-eeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCcccCEEEcCCCCEE
Confidence 688999986555555544445566 889999997 44444332 577777 466 555544335678899999996 6
Q ss_pred EEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeeccccccccEEEeCCCCEEEEEeCCC--CeEEEEEeCCCC
Q 018474 146 YFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYFANGIALSKNEDFVVVCESWK--FRCRRYWLKGDR 223 (355)
Q Consensus 146 y~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~~~~pngi~~~~dg~~l~v~~~~~--~~i~~~~~~~~~ 223 (355)
+++.+. .....|+.||.++++...+.........++++|||+.++++.... ..|+.+++++..
T Consensus 238 a~~~~~---------------~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~ 302 (415)
T 2hqs_A 238 AFALSK---------------TGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGA 302 (415)
T ss_dssp EEEECT---------------TSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSC
T ss_pred EEEEec---------------CCCceEEEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCC
Confidence 655432 113469999998888766554444456789999999887776432 378888876533
Q ss_pred CcceeEecccCCCCcCceEECCCCCEEEEee
Q 018474 224 AGILDAFIENLPGGPDNINLAPDGSFWIGLI 254 (355)
Q Consensus 224 ~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~ 254 (355)
. +.+. ........+.++++|++.+...
T Consensus 303 ~---~~l~-~~~~~~~~~~~spdG~~l~~~~ 329 (415)
T 2hqs_A 303 P---QRIT-WEGSQNQDADVSSDGKFMVMVS 329 (415)
T ss_dssp C---EECC-CSSSEEEEEEECTTSSEEEEEE
T ss_pred E---EEEe-cCCCcccCeEECCCCCEEEEEE
Confidence 2 2221 1122334577899998655443
No 125
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.99 E-value=3.5e-07 Score=79.84 Aligned_cols=197 Identities=12% Similarity=0.085 Sum_probs=126.6
Q ss_pred CCcccCeEECCC-CCEEEEeCC-CcEEEEcCCC--eEEEc-CCcCCcccEEEccCCcEEEEeCCCCCCCccccccccccC
Q 018474 93 SQSLLGLTTTKD-GGVILCDNE-KGLLKVTEEG--VEAIV-PDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGK 167 (355)
Q Consensus 93 ~~p~~gl~~d~~-g~L~v~~~~-~gl~~~~~~g--~~~~~-~~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~ 167 (355)
..+. ||++|++ ++||++... ..|+.++.+| .+.+. .....+.+|+++++|.+|+++..
T Consensus 27 ~~lS-Gla~~~~~~~L~aV~d~~~~I~~ld~~g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~---------------- 89 (255)
T 3qqz_A 27 NNIS-SLTWSAQSNTLFSTINKPAAIVEMTTNGDLIRTIPLDFVKDLETIEYIGDNQFVISDER---------------- 89 (255)
T ss_dssp SCEE-EEEEETTTTEEEEEEETTEEEEEEETTCCEEEEEECSSCSSEEEEEECSTTEEEEEETT----------------
T ss_pred cCcc-eeEEeCCCCEEEEEECCCCeEEEEeCCCCEEEEEecCCCCChHHeEEeCCCEEEEEECC----------------
Confidence 4577 9999975 579985544 4599999667 44443 22367889999999999998754
Q ss_pred CCCeEEEEe--CCCC--eEEEeeccc-ccc-----ccEEEeCCCCEEEEEeCCCC-eEEEEEeCCCC-CcceeEecc---
Q 018474 168 PYGQLRKYD--PKLK--ETTVLHEGF-YFA-----NGIALSKNEDFVVVCESWKF-RCRRYWLKGDR-AGILDAFIE--- 232 (355)
Q Consensus 168 ~~g~l~~~d--p~~~--~~~~~~~~~-~~p-----ngi~~~~dg~~l~v~~~~~~-~i~~~~~~~~~-~~~~~~~~~--- 232 (355)
.++++.|+ ..+. ......-.+ ..+ .|+|++++++.||++..... +|+.++ |.. ........+
T Consensus 90 -~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~--g~~~~~~l~i~~~~~~ 166 (255)
T 3qqz_A 90 -DYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVN--GLLSSNELHISKDKAL 166 (255)
T ss_dssp -TTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEE--STTCSSCCEEEECHHH
T ss_pred -CCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEc--ccccCCceeeecchhh
Confidence 34565553 3221 111111111 123 79999999988998876544 677776 311 111222110
Q ss_pred --cC-CCCcCceEECCC-CCEEEEeecCCchhhHhhhcchhHHHHHHhccchhhcccCCCCCCceEEEEEeCCCCeEEEE
Q 018474 233 --NL-PGGPDNINLAPD-GSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRD 308 (355)
Q Consensus 233 --~~-~g~p~~i~~d~~-G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~ 308 (355)
.. ..-+.++++|+. |++|+-.... ..++++|. +|+....
T Consensus 167 ~~~~~~~d~S~l~~dp~tg~lliLS~~s------------------------------------~~L~~~d~-~g~~~~~ 209 (255)
T 3qqz_A 167 QRQFTLDDVSGAEFNQQKNTLLVLSHES------------------------------------RALQEVTL-VGEVIGE 209 (255)
T ss_dssp HHTCCSSCCCEEEEETTTTEEEEEETTT------------------------------------TEEEEECT-TCCEEEE
T ss_pred ccccccCCceeEEEcCCCCeEEEEECCC------------------------------------CeEEEEcC-CCCEEEE
Confidence 01 112577888864 6788877542 47999999 9998877
Q ss_pred EECCCCC-----cccceeEEEEeC-CEEEEeecCCCeEEEeeCCC
Q 018474 309 FNDPDAT-----YISFVTSAAEFD-GNLYLASLQSNFIGILPLDG 347 (355)
Q Consensus 309 ~~~~~g~-----~~~~~~~~~~~~-g~L~v~~~~~~~i~~~~~~~ 347 (355)
+.-..|. .+...-+++.+. |+|||.+= .|.++|+.-.+
T Consensus 210 ~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE-~n~~y~f~~~~ 253 (255)
T 3qqz_A 210 MSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSE-PNRFYRFTPQS 253 (255)
T ss_dssp EECSTTGGGCSSCCCSEEEEEECTTCCEEEEET-TTEEEEEEC--
T ss_pred EEcCCccCCcccccCCCCeeEECCCCCEEEEcC-CceEEEEEecC
Confidence 7766542 245677888764 99999965 78999997543
No 126
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.98 E-value=2e-07 Score=86.34 Aligned_cols=245 Identities=16% Similarity=0.104 Sum_probs=138.5
Q ss_pred eEecCCCCCCCceEEEeeCCCeEEEEec----------CCEEEEEEcCCCeeEEeecc--------CCCcccCeEECCCC
Q 018474 44 TKLGEGCVNHPEDVSVVVSKGALYTATR----------DGWVKYFILHNETLVNWKHI--------DSQSLLGLTTTKDG 105 (355)
Q Consensus 44 ~~~~~~~~~~p~~i~~d~~~g~l~~~~~----------~g~i~~~~~~~g~~~~~~~~--------~~~p~~gl~~d~~g 105 (355)
..++.| ..|. ++++|++..+|+++. ++.|..+|..+++...-... +..|. ++++++||
T Consensus 73 ~~I~vG--~~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~-~~a~spDG 148 (386)
T 3sjl_D 73 GMIDGG--FLPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPW-MTSLTPDG 148 (386)
T ss_dssp EEEEEC--SSCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGG-GEEECTTS
T ss_pred EEEECC--CCCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCc-eEEEcCCC
Confidence 345555 5685 999988889999862 46699999988876543222 23699 99999999
Q ss_pred C-EEEEeC--CCcEEEEc-CCC--eEEEcCCc---CCccc----EEEccCCcEEEEeCCCCCCCccccccccccCCCCeE
Q 018474 106 G-VILCDN--EKGLLKVT-EEG--VEAIVPDA---SFTND----VIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQL 172 (355)
Q Consensus 106 ~-L~v~~~--~~gl~~~~-~~g--~~~~~~~~---~~~~~----l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l 172 (355)
+ |||++. .+.+..+| .++ +..+.... ..|.+ +++.+||++.+.+... .+.+
T Consensus 149 k~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~~~~~P~g~~~~~~~~~DG~~~~v~~~~----------------~g~v 212 (386)
T 3sjl_D 149 KTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGT----------------EGTP 212 (386)
T ss_dssp SEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCS----------------SSCC
T ss_pred CEEEEEEcCCCCeEEEEECCCCcEEEEEECCCcceeecCCCceeEEECCCCCEEEEECCC----------------CCeE
Confidence 6 899874 34577888 465 45553221 11222 2445566433332210 0111
Q ss_pred EEEeCCCCeEEEeecc--ccccccEEEe-CCCCEEEEEeCCCCeEEEEEeCCCCCc---ceeEecc--cCCC-CcCc---
Q 018474 173 RKYDPKLKETTVLHEG--FYFANGIALS-KNEDFVVVCESWKFRCRRYWLKGDRAG---ILDAFIE--NLPG-GPDN--- 240 (355)
Q Consensus 173 ~~~dp~~~~~~~~~~~--~~~pngi~~~-~dg~~l~v~~~~~~~i~~~~~~~~~~~---~~~~~~~--~~~g-~p~~--- 240 (355)
..-. + ..... ....+..+++ +||+.+|++. .++|+.++..+.... ....+.+ ..++ .|.+
T Consensus 213 ~~~~--~----~~~~~~~~~~~~~~~~~~~dG~~~~vs~--~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~ 284 (386)
T 3sjl_D 213 EITH--T----EVFHPEDEFLINHPAYSQKAGRLVWPTY--TGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQ 284 (386)
T ss_dssp EEEE--C----CCCSCTTSCBCSCCEEETTTTEEEEEBT--TSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSC
T ss_pred EEee--c----ceeccccccccccceeEcCCCcEEEEeC--CCEEEEEECCCCcceeecceeccccccccccccCCCcce
Confidence 0000 0 00100 0111123443 7887566554 578999998654321 1111111 0011 2333
Q ss_pred eEECCCC-CEEEEeecCCchhhHhhhcchhHHHHHHhccchhhcccCCCCCCceEEEEEeCCCCeEEEEEECCCCCcccc
Q 018474 241 INLAPDG-SFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISF 319 (355)
Q Consensus 241 i~~d~~G-~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~ 319 (355)
+.+++++ ++||++...... . ...+...|..+|.++++.+..+.... .
T Consensus 285 ~a~~~~~~~lyV~~~~~~~~----~-----------------------hk~~~~~V~viD~~t~kv~~~i~vg~-----~ 332 (386)
T 3sjl_D 285 VAYHRALDRIYLLVDQRDEW----R-----------------------HKTASRFVVVLDAKTGERLAKFEMGH-----E 332 (386)
T ss_dssp EEEETTTTEEEEEEEECCTT----C-----------------------TTSCEEEEEEEETTTCCEEEEEEEEE-----E
T ss_pred eeECCCCCeEEEEecccccc----c-----------------------cCCCCCEEEEEECCCCeEEEEEECCC-----C
Confidence 6777666 699998642100 0 00223579999998899888886632 2
Q ss_pred eeEEEE--eCC-EEEEeecCCCeEEEeeCCCC
Q 018474 320 VTSAAE--FDG-NLYLASLQSNFIGILPLDGP 348 (355)
Q Consensus 320 ~~~~~~--~~g-~L~v~~~~~~~i~~~~~~~~ 348 (355)
+.++.. ++. .||+++..++.|.+++..+-
T Consensus 333 ~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~ 364 (386)
T 3sjl_D 333 IDSINVSQDEKPLLYALSTGDKTLYIHDAESG 364 (386)
T ss_dssp ECEEEECSSSSCEEEEEETTTTEEEEEETTTC
T ss_pred cceEEECCCCCeEEEEEcCCCCeEEEEECCCC
Confidence 333443 333 68888888999999987653
No 127
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.98 E-value=9.2e-07 Score=81.52 Aligned_cols=221 Identities=14% Similarity=0.116 Sum_probs=127.4
Q ss_pred eEEEeeCCCeEEEEecCCEEEEEEcCCCeeEEeecc----------CCCcccCeEECCCCCEEEEeCCCcEEEEcC-CC-
Q 018474 56 DVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHI----------DSQSLLGLTTTKDGGVILCDNEKGLLKVTE-EG- 123 (355)
Q Consensus 56 ~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~~~~----------~~~p~~gl~~d~~g~L~v~~~~~gl~~~~~-~g- 123 (355)
..+++ ++.+|+++.++.|+.+|.++|+..-.... .......... .++++|+++..++++.++. +|
T Consensus 48 ~p~v~--~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~v~~~~g~l~a~d~~tG~ 124 (376)
T 3q7m_A 48 HPALA--DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTV-SGGHVYIGSEKAQVYALNTSDGT 124 (376)
T ss_dssp CCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEE-ETTEEEEEETTSEEEEEETTTCC
T ss_pred ccEEE--CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceE-eCCEEEEEcCCCEEEEEECCCCC
Confidence 55665 78999999999999999988875421111 1111102333 4789999987778999994 77
Q ss_pred eEE-EcCCcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeeccccc------cccEE
Q 018474 124 VEA-IVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYF------ANGIA 196 (355)
Q Consensus 124 ~~~-~~~~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~~~~------pngi~ 196 (355)
... ...........++ .+|.+|+... .+.++.+|+++|+.......... ....+
T Consensus 125 ~~W~~~~~~~~~~~p~~-~~~~v~v~~~------------------~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~ 185 (376)
T 3q7m_A 125 VAWQTKVAGEALSRPVV-SDGLVLIHTS------------------NGQLQALNEADGAVKWTVNLDMPSLSLRGESAPT 185 (376)
T ss_dssp EEEEEECSSCCCSCCEE-ETTEEEEECT------------------TSEEEEEETTTCCEEEEEECCC-----CCCCCCE
T ss_pred EEEEEeCCCceEcCCEE-ECCEEEEEcC------------------CCeEEEEECCCCcEEEEEeCCCCceeecCCCCcE
Confidence 322 2111111111222 3678888642 45799999988876543322110 12223
Q ss_pred EeCCCCEEEEEeCCCCeEEEEEeCCCCCcceeEecccCCC---------CcCceEECCCCCEEEEeecCCchhhHhhhcc
Q 018474 197 LSKNEDFVVVCESWKFRCRRYWLKGDRAGILDAFIENLPG---------GPDNINLAPDGSFWIGLIKMNQTGVRAIQKC 267 (355)
Q Consensus 197 ~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g---------~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~ 267 (355)
+. ++ .+|+. +..+.|..++.+..+........ ...+ ....... .+|.+|+++..
T Consensus 186 ~~-~~-~v~~g-~~~g~l~~~d~~tG~~~w~~~~~-~~~~~~~~~~~~~~~~~p~~-~~~~v~~~~~~------------ 248 (376)
T 3q7m_A 186 TA-FG-AAVVG-GDNGRVSAVLMEQGQMIWQQRIS-QATGSTEIDRLSDVDTTPVV-VNGVVFALAYN------------ 248 (376)
T ss_dssp EE-TT-EEEEC-CTTTEEEEEETTTCCEEEEEECC-C-----------CCCCCCEE-ETTEEEEECTT------------
T ss_pred EE-CC-EEEEE-cCCCEEEEEECCCCcEEEEEecc-cCCCCcccccccccCCCcEE-ECCEEEEEecC------------
Confidence 33 33 46664 45678999997533221111110 0000 0011122 35789998754
Q ss_pred hhHHHHHHhccchhhcccCCCCCCceEEEEEeCCCCeEEEEEECCCCCcccceeEEEEeCCEEEEeecCCCeEEEeeCCC
Q 018474 268 REKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFDGNLYLASLQSNFIGILPLDG 347 (355)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~~~i~~~~~~~ 347 (355)
+.+..+|+++|+..-.+.. + ........+++||+++. .+.|..++..+
T Consensus 249 -------------------------g~l~~~d~~tG~~~w~~~~--~----~~~~~~~~~~~l~~~~~-~g~l~~~d~~t 296 (376)
T 3q7m_A 249 -------------------------GNLTALDLRSGQIMWKREL--G----SVNDFIVDGNRIYLVDQ-NDRVMALTIDG 296 (376)
T ss_dssp -------------------------SCEEEEETTTCCEEEEECC--C----CEEEEEEETTEEEEEET-TCCEEEEETTT
T ss_pred -------------------------cEEEEEECCCCcEEeeccC--C----CCCCceEECCEEEEEcC-CCeEEEEECCC
Confidence 4699999878887654432 2 13345667899999986 56787777654
No 128
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.97 E-value=3.4e-07 Score=85.66 Aligned_cols=193 Identities=8% Similarity=0.040 Sum_probs=118.4
Q ss_pred eCCCeEEEEec-CCEEEEEEcCCC----eeEEee-------ccC-CCcccCeEECCCCCEEEEeCC-------CcEEEEc
Q 018474 61 VSKGALYTATR-DGWVKYFILHNE----TLVNWK-------HID-SQSLLGLTTTKDGGVILCDNE-------KGLLKVT 120 (355)
Q Consensus 61 ~~~g~l~~~~~-~g~i~~~~~~~g----~~~~~~-------~~~-~~p~~gl~~d~~g~L~v~~~~-------~gl~~~~ 120 (355)
.+.+.||+... +++|+.+|.++. +..... +.+ .+|+ +++..++| +||+..+ ++++.+|
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph-~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD 170 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLH-TVHCGPDA-IYISALGNEEGEGPGGILMLD 170 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEE-EEEECSSC-EEEEEEEETTSCSCCEEEEEC
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCccc-ceeECCCe-EEEEcCCCcCCCCCCeEEEEE
Confidence 36788998654 688999997644 333332 112 3688 89999999 9996543 3689999
Q ss_pred C-CC--eEEEcCC---cCCcccEEEccCCcEEEEeC-CCCCC-CccccccccccCCCCeEEEEeCCCCeEEEeecc---c
Q 018474 121 E-EG--VEAIVPD---ASFTNDVIAASDGTLYFTVA-STKYT-PTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEG---F 189 (355)
Q Consensus 121 ~-~g--~~~~~~~---~~~~~~l~~d~dG~ly~~d~-~~~~~-~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~---~ 189 (355)
. ++ +..+... ..+..++-+.+++++.++.. ...-. ...+....++......|..||.++++......- .
T Consensus 171 ~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g 250 (462)
T 2ece_A 171 HYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEEN 250 (462)
T ss_dssp TTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTE
T ss_pred CCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCC
Confidence 4 55 5554422 15667788899987666542 10000 000111111112356899999987754332221 2
Q ss_pred cccccEEE--eCCCCEEEEEeC-----CCCeEEEEEeCCCCCcceeEe--c-----ccC----------CCCcCceEECC
Q 018474 190 YFANGIAL--SKNEDFVVVCES-----WKFRCRRYWLKGDRAGILDAF--I-----ENL----------PGGPDNINLAP 245 (355)
Q Consensus 190 ~~pngi~~--~~dg~~l~v~~~-----~~~~i~~~~~~~~~~~~~~~~--~-----~~~----------~g~p~~i~~d~ 245 (355)
..|..+.+ +||++++|++.. ..+.|+++..++......+.+ . ..+ +..|.+|.++.
T Consensus 251 ~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~ 330 (462)
T 2ece_A 251 RMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISL 330 (462)
T ss_dssp EEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECT
T ss_pred CccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECC
Confidence 46777766 999999999998 888998877654221111111 0 011 24678899999
Q ss_pred CCC-EEEEeec
Q 018474 246 DGS-FWIGLIK 255 (355)
Q Consensus 246 ~G~-lwv~~~~ 255 (355)
||+ +||++..
T Consensus 331 DGrfLYVSnrg 341 (462)
T 2ece_A 331 DDKFLYLSLWG 341 (462)
T ss_dssp TSCEEEEEETT
T ss_pred CCCEEEEEeCC
Confidence 997 7887755
No 129
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=98.95 E-value=8.1e-07 Score=80.97 Aligned_cols=236 Identities=11% Similarity=0.033 Sum_probs=143.7
Q ss_pred CCCceEEEeeCCCeEEEEecCCEEEEEEcCCCe---eEEeeccCCCcccCeEECCCCCEEEEeCCCc-EEEEc-CCC--e
Q 018474 52 NHPEDVSVVVSKGALYTATRDGWVKYFILHNET---LVNWKHIDSQSLLGLTTTKDGGVILCDNEKG-LLKVT-EEG--V 124 (355)
Q Consensus 52 ~~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~---~~~~~~~~~~p~~gl~~d~~g~L~v~~~~~g-l~~~~-~~g--~ 124 (355)
..-.++++.+++..++++..++.|..++..+++ ...+......+. ++++.++|+++++....| +..++ .++ .
T Consensus 9 ~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~ 87 (372)
T 1k8k_C 9 EPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVT-GVDWAPDSNRIVTCGTDRNAYVWTLKGRTWK 87 (372)
T ss_dssp SCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEE-EEEEETTTTEEEEEETTSCEEEEEEETTEEE
T ss_pred CCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCccc-EEEEeCCCCEEEEEcCCCeEEEEECCCCeee
Confidence 456788999767777788889999999997775 233332334567 899999988666544444 55555 344 2
Q ss_pred EEE--cCCcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCe----EEEeecc-ccccccEEE
Q 018474 125 EAI--VPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKE----TTVLHEG-FYFANGIAL 197 (355)
Q Consensus 125 ~~~--~~~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~----~~~~~~~-~~~pngi~~ 197 (355)
... ......+.++.++++|+..++... .+.+..||.++++ ...+... ......+++
T Consensus 88 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----------------d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~ 150 (372)
T 1k8k_C 88 PTLVILRINRAARCVRWAPNEKKFAVGSG-----------------SRVISICYFEQENDWWVCKHIKKPIRSTVLSLDW 150 (372)
T ss_dssp EEEECCCCSSCEEEEEECTTSSEEEEEET-----------------TSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEE
T ss_pred eeEEeecCCCceeEEEECCCCCEEEEEeC-----------------CCEEEEEEecCCCcceeeeeeecccCCCeeEEEE
Confidence 222 222267888999999976655332 3345555544443 2222222 234578999
Q ss_pred eCCCCEEEEEeCCCCeEEEEEeCCCC---------------CcceeEecccCCCCcCceEECCCCCEEEEeecCCchhhH
Q 018474 198 SKNEDFVVVCESWKFRCRRYWLKGDR---------------AGILDAFIENLPGGPDNINLAPDGSFWIGLIKMNQTGVR 262 (355)
Q Consensus 198 ~~dg~~l~v~~~~~~~i~~~~~~~~~---------------~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~ 262 (355)
+|+++.++.+ ...+.|..|++.... .+..........+....+.++++|++.++....
T Consensus 151 ~~~~~~l~~~-~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------ 223 (372)
T 1k8k_C 151 HPNSVLLAAG-SCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHD------ 223 (372)
T ss_dssp CTTSSEEEEE-ETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETT------
T ss_pred cCCCCEEEEE-cCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCC------
Confidence 9999965555 456788889864210 111111111222334567788888766655431
Q ss_pred hhhcchhHHHHHHhccchhhcccCCCCCCceEEEEEeCCCCeEEEEEECCCCCcccceeEEEEe-CCEEEEeecCCCeEE
Q 018474 263 AIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF-DGNLYLASLQSNFIG 341 (355)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-~g~L~v~~~~~~~i~ 341 (355)
+.|..+|..+++.+..+..+.+ .+..+... ++++.+++ ..+.|.
T Consensus 224 ------------------------------~~i~i~d~~~~~~~~~~~~~~~----~v~~~~~~~~~~~l~~~-~d~~i~ 268 (372)
T 1k8k_C 224 ------------------------------STVCLADADKKMAVATLASETL----PLLAVTFITESSLVAAG-HDCFPV 268 (372)
T ss_dssp ------------------------------TEEEEEEGGGTTEEEEEECSSC----CEEEEEEEETTEEEEEE-TTSSCE
T ss_pred ------------------------------CEEEEEECCCCceeEEEccCCC----CeEEEEEecCCCEEEEE-eCCeEE
Confidence 3577788757787778876543 34445543 57766666 678888
Q ss_pred EeeCCC
Q 018474 342 ILPLDG 347 (355)
Q Consensus 342 ~~~~~~ 347 (355)
.++++.
T Consensus 269 i~~~~~ 274 (372)
T 1k8k_C 269 LFTYDS 274 (372)
T ss_dssp EEEEET
T ss_pred EEEccC
Confidence 888765
No 130
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.95 E-value=6e-08 Score=88.91 Aligned_cols=138 Identities=14% Similarity=0.147 Sum_probs=95.9
Q ss_pred CCCceEEEeeC-CC--eEEEEecCC-----EEEEEEcCCCeeEEeecc----CCCcccCeEECCCCCEEEEeC-------
Q 018474 52 NHPEDVSVVVS-KG--ALYTATRDG-----WVKYFILHNETLVNWKHI----DSQSLLGLTTTKDGGVILCDN------- 112 (355)
Q Consensus 52 ~~p~~i~~d~~-~g--~l~~~~~~g-----~i~~~~~~~g~~~~~~~~----~~~p~~gl~~d~~g~L~v~~~------- 112 (355)
..|.+|.+.++ ++ +||+..... +|+++++.++....+... ..+|+ .+++|++|++|+++.
T Consensus 112 f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pN-D~~v~~~G~fyvt~~~~ftd~~ 190 (355)
T 3sre_A 112 FNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVN-DIVAVGPEHFYATNDHYFIDPY 190 (355)
T ss_dssp CCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEE-EEEEEETTEEEEEESCSCSSHH
T ss_pred eeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCc-eEEEeCCCCEEecCCcEeCCcc
Confidence 48999998742 33 588876532 478888865654443222 24688 999999999999875
Q ss_pred -----------CCcEEEEcCCCeEEEcCCcCCcccEEEccCC-cEEEEeCCCCCCCccccccccccCCCCeEEEEeCC-C
Q 018474 113 -----------EKGLLKVTEEGVEAIVPDASFTNDVIAASDG-TLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPK-L 179 (355)
Q Consensus 113 -----------~~gl~~~~~~g~~~~~~~~~~~~~l~~d~dG-~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~-~ 179 (355)
.+.++++++..++.+......||++++++|| .+|++++. ...+++|+-+ +
T Consensus 191 ~~~~e~~~~~~~g~vyr~d~~~~~~~~~~l~~pNGia~spDg~~lYvadt~-----------------~~~I~~~~~~~~ 253 (355)
T 3sre_A 191 LKSWEMHLGLAWSFVTYYSPNDVRVVAEGFDFANGINISPDGKYVYIAELL-----------------AHKIHVYEKHAN 253 (355)
T ss_dssp HHHHHHHTTCCCEEEEEECTTCCEEEEEEESSEEEEEECTTSSEEEEEEGG-----------------GTEEEEEEECTT
T ss_pred cccchhhccCCccEEEEEECCeEEEeecCCcccCcceECCCCCEEEEEeCC-----------------CCeEEEEEECCC
Confidence 1348888863356555556899999999998 79999875 4567777642 3
Q ss_pred CeEEE--eeccccccccEEEeC-CCCEEEEEe
Q 018474 180 KETTV--LHEGFYFANGIALSK-NEDFVVVCE 208 (355)
Q Consensus 180 ~~~~~--~~~~~~~pngi~~~~-dg~~l~v~~ 208 (355)
+++.. ...-...|+|+++++ +|+ +|++.
T Consensus 254 g~l~~~~~~~~~g~PDGi~vD~e~G~-lwva~ 284 (355)
T 3sre_A 254 WTLTPLRVLSFDTLVDNISVDPVTGD-LWVGC 284 (355)
T ss_dssp SCEEEEEEEECSSEEEEEEECTTTCC-EEEEE
T ss_pred CcEecCEEEeCCCCCceEEEeCCCCc-EEEEe
Confidence 43321 123346799999999 598 88854
No 131
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.95 E-value=2.2e-07 Score=81.48 Aligned_cols=164 Identities=12% Similarity=0.096 Sum_probs=104.8
Q ss_pred cCCEEEEEEcCCCeeEEeeccCCCcccCeEECCCCCEEEEeCCCcEEEEc-CC-C-eEEEcCCc--CCcccEEEccCCcE
Q 018474 71 RDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVT-EE-G-VEAIVPDA--SFTNDVIAASDGTL 145 (355)
Q Consensus 71 ~~g~i~~~~~~~g~~~~~~~~~~~p~~gl~~d~~g~L~v~~~~~gl~~~~-~~-g-~~~~~~~~--~~~~~l~~d~dG~l 145 (355)
.++.|+.+|..+++...+......+. ++++.++|+.++....+.++.++ .+ + ...+.... ..+.+++++++|+.
T Consensus 20 ~~~~i~~~d~~~~~~~~~~~~~~~v~-~~~~spdg~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~ 98 (297)
T 2ojh_A 20 MRSSIEIFNIRTRKMRVVWQTPELFE-APNWSPDGKYLLLNSEGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGAL 98 (297)
T ss_dssp CCEEEEEEETTTTEEEEEEEESSCCE-EEEECTTSSEEEEEETTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSE
T ss_pred cceeEEEEeCCCCceeeeccCCcceE-eeEECCCCCEEEEEcCCeEEEEeCCCCCCceEeccccccccccceEECCCCCE
Confidence 36789999998888776655555677 89999999866655566788888 46 7 55443322 56788999999964
Q ss_pred EEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeeccccccccEEEeCCCCEEEEEeCCCC--eEEEEEeCCCC
Q 018474 146 YFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYFANGIALSKNEDFVVVCESWKF--RCRRYWLKGDR 223 (355)
Q Consensus 146 y~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~~~~pngi~~~~dg~~l~v~~~~~~--~i~~~~~~~~~ 223 (355)
.+..... ......++.++..+++.+.+... .....++++||++.++++....+ .|+.++.++.
T Consensus 99 l~~~~~~-------------~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~- 163 (297)
T 2ojh_A 99 YAISDKV-------------EFGKSAIYLLPSTGGTPRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSG- 163 (297)
T ss_dssp EEEEECT-------------TTSSCEEEEEETTCCCCEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTC-
T ss_pred EEEEEeC-------------CCCcceEEEEECCCCceEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCC-
Confidence 4432210 01245799999877765554332 23667899999998886654445 4555554332
Q ss_pred CcceeEecccCCCCcCceEECCCCCE-EEEe
Q 018474 224 AGILDAFIENLPGGPDNINLAPDGSF-WIGL 253 (355)
Q Consensus 224 ~~~~~~~~~~~~g~p~~i~~d~~G~l-wv~~ 253 (355)
....+. ...+....+.++++|+. +++.
T Consensus 164 --~~~~~~-~~~~~~~~~~~s~dg~~l~~~~ 191 (297)
T 2ojh_A 164 --VETRLT-HGEGRNDGPDYSPDGRWIYFNS 191 (297)
T ss_dssp --CEEECC-CSSSCEEEEEECTTSSEEEEEE
T ss_pred --cceEcc-cCCCccccceECCCCCEEEEEe
Confidence 222222 22334566788899974 4444
No 132
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=98.94 E-value=1.7e-06 Score=80.32 Aligned_cols=236 Identities=12% Similarity=0.080 Sum_probs=144.0
Q ss_pred ceEEEeeCCCeEEEEecCCEEEEEEcCCCeeEEeec-cCCCcccCeEECCCCCEEEEeCCCc-EEEEc-CCC--eEEEcC
Q 018474 55 EDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKH-IDSQSLLGLTTTKDGGVILCDNEKG-LLKVT-EEG--VEAIVP 129 (355)
Q Consensus 55 ~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~~~-~~~~p~~gl~~d~~g~L~v~~~~~g-l~~~~-~~g--~~~~~~ 129 (355)
.++++.+++..|.++..++.|..+|..+++...... ....+. ++++.++|+.+++...++ +..++ .++ ...+..
T Consensus 127 ~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~-~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~ 205 (393)
T 1erj_A 127 RSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIY-SLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSI 205 (393)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEE-EEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred EEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEE-EEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEc
Confidence 478888767778888899999999998887654433 234466 899999988666554555 44455 455 333322
Q ss_pred CcCCcccEEEcc-CCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeec--------cccccccEEEeCC
Q 018474 130 DASFTNDVIAAS-DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHE--------GFYFANGIALSKN 200 (355)
Q Consensus 130 ~~~~~~~l~~d~-dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~--------~~~~pngi~~~~d 200 (355)
. ..+..+++.+ +|++.++.+. .+.+..||..+++...... .......++++||
T Consensus 206 ~-~~v~~~~~~~~~~~~l~~~s~-----------------d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~ 267 (393)
T 1erj_A 206 E-DGVTTVAVSPGDGKYIAAGSL-----------------DRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRD 267 (393)
T ss_dssp S-SCEEEEEECSTTCCEEEEEET-----------------TSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTT
T ss_pred C-CCcEEEEEECCCCCEEEEEcC-----------------CCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCC
Confidence 2 4577888888 7877665433 4567888887765432221 1123457899999
Q ss_pred CCEEEEEeCCCCeEEEEEeCCCCC---------cceeEecccCCCCcCceEECCCCCEEEEeecCCchhhHhhhcchhHH
Q 018474 201 EDFVVVCESWKFRCRRYWLKGDRA---------GILDAFIENLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKW 271 (355)
Q Consensus 201 g~~l~v~~~~~~~i~~~~~~~~~~---------~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~ 271 (355)
++.++ +....+.|..|++..... +...............+.++++|.+.++...
T Consensus 268 g~~l~-s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~---------------- 330 (393)
T 1erj_A 268 GQSVV-SGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSK---------------- 330 (393)
T ss_dssp SSEEE-EEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEET----------------
T ss_pred CCEEE-EEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeC----------------
Confidence 99654 445677888888753211 0111111112222334667777776655433
Q ss_pred HHHHhccchhhcccCCCCCCceEEEEEeCCCCeEEEEEECCCCCcccceeEEEEe-------CCEEEEeecCCCeEEEee
Q 018474 272 ELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF-------DGNLYLASLQSNFIGILP 344 (355)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-------~g~L~v~~~~~~~i~~~~ 344 (355)
.+.|..+|.++++.+..+..+.+ .+..+... +++++++......|...+
T Consensus 331 --------------------D~~v~iwd~~~~~~~~~l~~h~~----~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~ 386 (393)
T 1erj_A 331 --------------------DRGVLFWDKKSGNPLLMLQGHRN----SVISVAVANGSSLGPEYNVFATGSGDCKARIWK 386 (393)
T ss_dssp --------------------TSEEEEEETTTCCEEEEEECCSS----CEEEEEECSSCTTCTTCEEEEEEETTSEEEEEE
T ss_pred --------------------CCeEEEEECCCCeEEEEECCCCC----CEEEEEecCCcCcCCCCCEEEEECCCCcEEECc
Confidence 14688888867888888876554 34445443 356777666677888777
Q ss_pred CCCCCC
Q 018474 345 LDGPEP 350 (355)
Q Consensus 345 ~~~~~~ 350 (355)
+....|
T Consensus 387 ~~~~~p 392 (393)
T 1erj_A 387 YKKIAP 392 (393)
T ss_dssp EEEC--
T ss_pred ccccCC
Confidence 765544
No 133
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.93 E-value=3.1e-07 Score=84.77 Aligned_cols=215 Identities=14% Similarity=0.130 Sum_probs=127.2
Q ss_pred CCCeEEEEecCCEEEEEEcCCCeeEEeeccCCCcccCeEECCCCCEEEEeCCCcEEEEcC-CC-eEE-EcCCc-----CC
Q 018474 62 SKGALYTATRDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVTE-EG-VEA-IVPDA-----SF 133 (355)
Q Consensus 62 ~~g~l~~~~~~g~i~~~~~~~g~~~~~~~~~~~p~~gl~~d~~g~L~v~~~~~gl~~~~~-~g-~~~-~~~~~-----~~ 133 (355)
.++.+|+++.++.|+.+|.++|+..--............. .+|++|+++..++++.++. +| ... ..... ..
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~-~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~ 180 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVV-SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRG 180 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEE-ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEE-ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecC
Confidence 4789999999999999999889754222222222202333 3789999987777999994 77 322 22111 01
Q ss_pred cccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeecccccc-------------ccEEEeCC
Q 018474 134 TNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYFA-------------NGIALSKN 200 (355)
Q Consensus 134 ~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~~~~p-------------ngi~~~~d 200 (355)
....+++ +|.+|++.. .+.++.+|+++++........ .| ....+ +
T Consensus 181 ~~~~~~~-~~~v~~g~~------------------~g~l~~~d~~tG~~~w~~~~~-~~~~~~~~~~~~~~~~~p~~--~ 238 (376)
T 3q7m_A 181 ESAPTTA-FGAAVVGGD------------------NGRVSAVLMEQGQMIWQQRIS-QATGSTEIDRLSDVDTTPVV--V 238 (376)
T ss_dssp CCCCEEE-TTEEEECCT------------------TTEEEEEETTTCCEEEEEECC-C-----------CCCCCCEE--E
T ss_pred CCCcEEE-CCEEEEEcC------------------CCEEEEEECCCCcEEEEEecc-cCCCCcccccccccCCCcEE--E
Confidence 1223333 577887532 467999999888765433211 11 11122 2
Q ss_pred CCEEEEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCCEEEEeecCCchhhHhhhcchhHHHHHHhccch
Q 018474 201 EDFVVVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGL 280 (355)
Q Consensus 201 g~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (355)
+..+|+.. ..+.+.+++.+..+.. .+ . .... ...+..+ ++++|+++..
T Consensus 239 ~~~v~~~~-~~g~l~~~d~~tG~~~-w~-~--~~~~-~~~~~~~-~~~l~~~~~~------------------------- 286 (376)
T 3q7m_A 239 NGVVFALA-YNGNLTALDLRSGQIM-WK-R--ELGS-VNDFIVD-GNRIYLVDQN------------------------- 286 (376)
T ss_dssp TTEEEEEC-TTSCEEEEETTTCCEE-EE-E--CCCC-EEEEEEE-TTEEEEEETT-------------------------
T ss_pred CCEEEEEe-cCcEEEEEECCCCcEE-ee-c--cCCC-CCCceEE-CCEEEEEcCC-------------------------
Confidence 34577765 4678999997533211 11 1 1111 2335554 5789999865
Q ss_pred hhcccCCCCCCceEEEEEeCCCCeEEEEEECCCCCcccceeEEEEeCCEEEEeecCCCeEEEeeCCC
Q 018474 281 ISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFDGNLYLASLQSNFIGILPLDG 347 (355)
Q Consensus 281 ~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~~~i~~~~~~~ 347 (355)
+.++++|+++|+..-.+....+. ..+.....+++||+++. ...|..++..+
T Consensus 287 ------------g~l~~~d~~tG~~~w~~~~~~~~---~~~~~~~~~~~l~v~~~-~g~l~~~d~~t 337 (376)
T 3q7m_A 287 ------------DRVMALTIDGGVTLWTQSDLLHR---LLTSPVLYNGNLVVGDS-EGYLHWINVED 337 (376)
T ss_dssp ------------CCEEEEETTTCCEEEEECTTTTS---CCCCCEEETTEEEEECT-TSEEEEEETTT
T ss_pred ------------CeEEEEECCCCcEEEeecccCCC---cccCCEEECCEEEEEeC-CCeEEEEECCC
Confidence 46999998788876555422221 22333456789999886 55777777544
No 134
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.92 E-value=3e-07 Score=80.61 Aligned_cols=180 Identities=12% Similarity=0.037 Sum_probs=113.4
Q ss_pred CCCceEEEeeCCCeEEEEecCCEEEEEEcCC-CeeEEeeccC--CCcccCeEECCCCCEEEEeC-----CCcEEEEcC-C
Q 018474 52 NHPEDVSVVVSKGALYTATRDGWVKYFILHN-ETLVNWKHID--SQSLLGLTTTKDGGVILCDN-----EKGLLKVTE-E 122 (355)
Q Consensus 52 ~~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~-g~~~~~~~~~--~~p~~gl~~d~~g~L~v~~~-----~~gl~~~~~-~ 122 (355)
....++++.|++..++++. ++.|+.++..+ ++........ ..+. .+++.++|+.++... ...++.++. +
T Consensus 42 ~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~-~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~ 119 (297)
T 2ojh_A 42 ELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNN-DHGISPDGALYAISDKVEFGKSAIYLLPSTG 119 (297)
T ss_dssp SCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCS-CCEECTTSSEEEEEECTTTSSCEEEEEETTC
T ss_pred cceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEecccccccccc-ceEECCCCCEEEEEEeCCCCcceEEEEECCC
Confidence 4577899996666566554 78999999988 7766554322 3466 899999998554433 235777774 4
Q ss_pred C-eEEEcCCcCCcccEEEccCCc-EEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeeccccccccEEEeCC
Q 018474 123 G-VEAIVPDASFTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYFANGIALSKN 200 (355)
Q Consensus 123 g-~~~~~~~~~~~~~l~~d~dG~-ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~~~~pngi~~~~d 200 (355)
+ .+.+... ..++.++++++|+ |+++... ...-.++.++..+++...+.........++++||
T Consensus 120 ~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~---------------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~d 183 (297)
T 2ojh_A 120 GTPRLMTKN-LPSYWHGWSPDGKSFTYCGIR---------------DQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPD 183 (297)
T ss_dssp CCCEECCSS-SSEEEEEECTTSSEEEEEEEE---------------TTEEEEEEEETTTCCEEECCCSSSCEEEEEECTT
T ss_pred CceEEeecC-CCccceEECCCCCEEEEEECC---------------CCceEEEEEECCCCcceEcccCCCccccceECCC
Confidence 5 5554433 3477788999995 5544322 0122688888877777665554455678999999
Q ss_pred CCEEEEEeC--CCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCCEEEEe
Q 018474 201 EDFVVVCES--WKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGL 253 (355)
Q Consensus 201 g~~l~v~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~ 253 (355)
++.++++.. ...+|+.++.++.. ...+. ........+.++++|++.+..
T Consensus 184 g~~l~~~~~~~~~~~i~~~~~~~~~---~~~~~-~~~~~~~~~~~s~dg~~l~~~ 234 (297)
T 2ojh_A 184 GRWIYFNSSRTGQMQIWRVRVDGSS---VERIT-DSAYGDWFPHPSPSGDKVVFV 234 (297)
T ss_dssp SSEEEEEECTTSSCEEEEEETTSSC---EEECC-CCSEEEEEEEECTTSSEEEEE
T ss_pred CCEEEEEecCCCCccEEEECCCCCC---cEEEe-cCCcccCCeEECCCCCEEEEE
Confidence 998887754 34456666654322 22222 112223446788999854433
No 135
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.91 E-value=4.2e-07 Score=85.07 Aligned_cols=188 Identities=10% Similarity=0.086 Sum_probs=114.0
Q ss_pred CCCCceEEEeeCCCeEEEEec-C------CEEEEEEcCCCeeEEeeccCCC----cccCeEECCCCCEEEEe-C------
Q 018474 51 VNHPEDVSVVVSKGALYTATR-D------GWVKYFILHNETLVNWKHIDSQ----SLLGLTTTKDGGVILCD-N------ 112 (355)
Q Consensus 51 ~~~p~~i~~d~~~g~l~~~~~-~------g~i~~~~~~~g~~~~~~~~~~~----p~~gl~~d~~g~L~v~~-~------ 112 (355)
...|..+... .+| +|++.. + |++..+|.++++...-...+.. ++ .+.+.++++.+++. +
T Consensus 137 ~s~Ph~~~~~-pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Y-d~~~~p~~~~mvsS~wg~p~~~ 213 (462)
T 2ece_A 137 YSRLHTVHCG-PDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAY-DFWWNLPNEVLVSSEWAVPNTI 213 (462)
T ss_dssp EEEEEEEEEC-SSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCC-CEEEETTTTEEEECBCCCHHHH
T ss_pred CCcccceeEC-CCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccc-eEEECCCCCEEEEccCcCcccc
Confidence 4579999999 456 887543 2 6899999988876543332222 34 45567788755544 2
Q ss_pred -------------CCcEEEEc-CCC--eEEEcCC-c-CCcccEEE--ccCC-cEEEEeCCCCCCCccccccccccCCCCe
Q 018474 113 -------------EKGLLKVT-EEG--VEAIVPD-A-SFTNDVIA--ASDG-TLYFTVASTKYTPTDFYKDMAEGKPYGQ 171 (355)
Q Consensus 113 -------------~~gl~~~~-~~g--~~~~~~~-~-~~~~~l~~--d~dG-~ly~~d~~~~~~~~~~~~~~~~~~~~g~ 171 (355)
.+.|..++ .++ ++++... . ..|.++.+ +++| .+|++...+.-. ...+-.
T Consensus 214 ~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~----------Lss~V~ 283 (462)
T 2ece_A 214 EDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKD----------LSSSIW 283 (462)
T ss_dssp TTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTT----------CCEEEE
T ss_pred ccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccC----------CCceEE
Confidence 35577777 455 4444432 1 46777766 8998 688876400000 011112
Q ss_pred EEEEeCCCCeEEEee-----c----c------------ccccccEEEeCCCCEEEEEeCCCCeEEEEEeCCCC-CcceeE
Q 018474 172 LRKYDPKLKETTVLH-----E----G------------FYFANGIALSKNEDFVVVCESWKFRCRRYWLKGDR-AGILDA 229 (355)
Q Consensus 172 l~~~dp~~~~~~~~~-----~----~------------~~~pngi~~~~dg~~l~v~~~~~~~i~~~~~~~~~-~~~~~~ 229 (355)
++.|| .++++... . . ...|.+|.+|+||++||+++.+.+.|.+|+++... ......
T Consensus 284 v~~~d--~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~ 361 (462)
T 2ece_A 284 LWFYE--DGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGK 361 (462)
T ss_dssp EEEEE--TTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEE
T ss_pred EEEec--CCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEE
Confidence 34444 24443221 0 0 14578999999999999999999999999985321 111111
Q ss_pred e-cc------------cCCCCcCceEECCCCC-EEEEe
Q 018474 230 F-IE------------NLPGGPDNINLAPDGS-FWIGL 253 (355)
Q Consensus 230 ~-~~------------~~~g~p~~i~~d~~G~-lwv~~ 253 (355)
+ .. ...+.|.++.+++||+ +||+.
T Consensus 362 I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 362 VKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp EECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred EEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 1 11 1123599999999996 66665
No 136
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.91 E-value=8e-08 Score=92.90 Aligned_cols=192 Identities=13% Similarity=0.043 Sum_probs=120.8
Q ss_pred CCCeEEEEec-CCEEEEEEcCCCeeEEeec--cCCCcccCeEEC--CCC-CEEEEe-----------------CCCc-EE
Q 018474 62 SKGALYTATR-DGWVKYFILHNETLVNWKH--IDSQSLLGLTTT--KDG-GVILCD-----------------NEKG-LL 117 (355)
Q Consensus 62 ~~g~l~~~~~-~g~i~~~~~~~g~~~~~~~--~~~~p~~gl~~d--~~g-~L~v~~-----------------~~~g-l~ 117 (355)
+++.+|+... +++|.++|.++.+...+.. .+..|+ |+++. +++ .+|+++ ...+ +-
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~ph-g~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIH-GLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEE-EEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCc-ceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 4778999776 6789999999888665433 345699 99984 565 477774 1122 34
Q ss_pred EEcC-CC--eEEEcCCcCCcccEEEccCC-cEEEEeCCCCCC---------Cccccc---------ccccc--CCCCeEE
Q 018474 118 KVTE-EG--VEAIVPDASFTNDVIAASDG-TLYFTVASTKYT---------PTDFYK---------DMAEG--KPYGQLR 173 (355)
Q Consensus 118 ~~~~-~g--~~~~~~~~~~~~~l~~d~dG-~ly~~d~~~~~~---------~~~~~~---------~~~~~--~~~g~l~ 173 (355)
.+|. +. ..++.-. ..|..+++++|| .+|+++..+.-. ..++.. .+-.+ ..-+++.
T Consensus 179 vID~~t~~v~~qI~Vg-g~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~ 257 (595)
T 1fwx_A 179 AVDADKWEVAWQVLVS-GNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVK 257 (595)
T ss_dssp EEETTTTEEEEEEEES-SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEE
T ss_pred EEECCCCeEEEEEEeC-CCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEE
Confidence 4553 33 3333322 368999999998 688877543111 001000 00001 0014588
Q ss_pred EEeCCC--CeE-EEeeccccccccEEEeCCCCEEEEEeCCCCeEEEEEeCCC------CCcc-eeEecc-cCCCCcCceE
Q 018474 174 KYDPKL--KET-TVLHEGFYFANGIALSKNEDFVVVCESWKFRCRRYWLKGD------RAGI-LDAFIE-NLPGGPDNIN 242 (355)
Q Consensus 174 ~~dp~~--~~~-~~~~~~~~~pngi~~~~dg~~l~v~~~~~~~i~~~~~~~~------~~~~-~~~~~~-~~~g~p~~i~ 242 (355)
.+|+++ ++. .........|.|+.++|||+++|+++...+.|.+|+.+.. ++.. ...... .....|..++
T Consensus 258 VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~a 337 (595)
T 1fwx_A 258 VVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTA 337 (595)
T ss_dssp EEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEE
T ss_pred EEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEE
Confidence 899887 432 2233344679999999999999999999999999998632 1111 111111 1223589999
Q ss_pred ECCCCCEEEEeec
Q 018474 243 LAPDGSFWIGLIK 255 (355)
Q Consensus 243 ~d~~G~lwv~~~~ 255 (355)
+|++|+.|++..-
T Consensus 338 F~~dG~aY~t~~l 350 (595)
T 1fwx_A 338 FDGRGNAYTSLFL 350 (595)
T ss_dssp ECTTSEEEEEETT
T ss_pred ECCCCeEEEEEec
Confidence 9999988998865
No 137
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.91 E-value=6.9e-07 Score=82.33 Aligned_cols=247 Identities=13% Similarity=0.068 Sum_probs=138.2
Q ss_pred eEecCCCCCCCceEEEeeCCCeEEEEec----------CCEEEEEEcCCCeeEEeec-------cCCCcccCeEECCCCC
Q 018474 44 TKLGEGCVNHPEDVSVVVSKGALYTATR----------DGWVKYFILHNETLVNWKH-------IDSQSLLGLTTTKDGG 106 (355)
Q Consensus 44 ~~~~~~~~~~p~~i~~d~~~g~l~~~~~----------~g~i~~~~~~~g~~~~~~~-------~~~~p~~gl~~d~~g~ 106 (355)
..+..+ ..| .++++++++.+|+++. ++.|..+|..+++...... .+..|. +++++++|+
T Consensus 45 ~~i~~g--~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~-~i~~spdg~ 120 (361)
T 2oiz_A 45 GMVPTA--FNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDG-LFRQTTDGK 120 (361)
T ss_dssp EEEECC--EEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGG-GEEECTTSS
T ss_pred EEecCC--CCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcc-eEEECCCCC
Confidence 345554 568 9999988889999873 4569999988776543322 134688 999999996
Q ss_pred -EEEEeCC--CcEEEEc-CCC--eEE-EcCCcCCcccEEEccCC-cEEEEeCCCCCCCccccccccccCCCCeEEEEeCC
Q 018474 107 -VILCDNE--KGLLKVT-EEG--VEA-IVPDASFTNDVIAASDG-TLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPK 178 (355)
Q Consensus 107 -L~v~~~~--~gl~~~~-~~g--~~~-~~~~~~~~~~l~~d~dG-~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~ 178 (355)
||++... +.+..++ .++ +.. +... ....+.+.++| ..|++... .|.+..++.+
T Consensus 121 ~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~--~~~~v~~~p~~~~~~~~~~~-----------------dg~~~~v~~~ 181 (361)
T 2oiz_A 121 FIVLQNASPATSIGIVDVAKGDYVEDVTAAA--GCWSVIPQPNRPRSFMTICG-----------------DGGLLTINLG 181 (361)
T ss_dssp EEEEEEESSSEEEEEEETTTTEEEEEEGGGT--TEEEEEECTTSSSEEEEEET-----------------TSSEEEEEEC
T ss_pred EEEEECCCCCCeEEEEECCCCcEEEEEecCC--CcceeEEcCCCCeeEEEECC-----------------CCcEEEEEEC
Confidence 8888743 3477777 455 443 3221 11113334443 33433221 2222222221
Q ss_pred -CCeEEE------eeccccccccEEEeCCCCEEEEEeCCCCeEEEEEeCCCCCcceeEec--c----cCCCCcCc---eE
Q 018474 179 -LKETTV------LHEGFYFANGIALSKNEDFVVVCESWKFRCRRYWLKGDRAGILDAFI--E----NLPGGPDN---IN 242 (355)
Q Consensus 179 -~~~~~~------~~~~~~~pngi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~--~----~~~g~p~~---i~ 242 (355)
+++... ..+....|..+..++|++.+++.. ..+.++.++..+........+. . .....|.+ ++
T Consensus 182 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a 260 (361)
T 2oiz_A 182 EDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVS-YYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVG 260 (361)
T ss_dssp TTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEB-TTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEE
T ss_pred CCCcEeeeccccceEcCCCCceEEEecccCCEEEEEe-CCCeEEEEEecCCCceecccccccCccccccccccCCeeEEE
Confidence 122220 111112344556677887777665 4568988887543221111110 0 01112343 78
Q ss_pred ECCCC-CEEEEeecCCchhhHhhhcchhHHHHHHhccchhhcccCCCCCCceEEEEEeCCCCeEEEEEECCCCCccccee
Q 018474 243 LAPDG-SFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVT 321 (355)
Q Consensus 243 ~d~~G-~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~ 321 (355)
++++| ++||+....+.... .......|..+|.++++.+..+.... +.
T Consensus 261 ~~~dg~~lyv~~~~~~~~~~--------------------------~~~~~~~v~viD~~t~~~v~~i~~~~------p~ 308 (361)
T 2oiz_A 261 LHRASGRMYVFMHPDGKEGT--------------------------HKFPAAEIWVMDTKTKQRVARIPGRD------AL 308 (361)
T ss_dssp EETTTTEEEEEEESSCCTTC--------------------------TTCCCSEEEEEETTTTEEEEEEECTT------CC
T ss_pred EecCCCeEEEEEccCCCccc--------------------------ccCCCceEEEEECCCCcEEEEEecCC------ee
Confidence 88885 68888752110000 00112469999987888888886532 33
Q ss_pred EEEE--eCCEEEEeecCCCeEEEeeCCCC
Q 018474 322 SAAE--FDGNLYLASLQSNFIGILPLDGP 348 (355)
Q Consensus 322 ~~~~--~~g~L~v~~~~~~~i~~~~~~~~ 348 (355)
++.. ++..||+++. +.|.++++.+-
T Consensus 309 ~ia~spdg~~l~v~n~--~~v~v~D~~t~ 335 (361)
T 2oiz_A 309 SMTIDQQRNLMLTLDG--GNVNVYDISQP 335 (361)
T ss_dssp EEEEETTTTEEEEECS--SCEEEEECSSS
T ss_pred EEEECCCCCEEEEeCC--CeEEEEECCCC
Confidence 4444 4578998884 99999987654
No 138
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.90 E-value=2.2e-07 Score=85.76 Aligned_cols=223 Identities=8% Similarity=-0.088 Sum_probs=131.7
Q ss_pred eEecCCCCCCCceEEEeeCCCeEEEEec----------CCEEEEEEcCCCeeEEeeccC--------CCcccCeEECCCC
Q 018474 44 TKLGEGCVNHPEDVSVVVSKGALYTATR----------DGWVKYFILHNETLVNWKHID--------SQSLLGLTTTKDG 105 (355)
Q Consensus 44 ~~~~~~~~~~p~~i~~d~~~g~l~~~~~----------~g~i~~~~~~~g~~~~~~~~~--------~~p~~gl~~d~~g 105 (355)
.+++.| ..| +++++++++.+|+++. ++.|..+|+.+++.......+ ..|. ++++++||
T Consensus 60 ~~i~vG--~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~-~ia~SpDG 135 (368)
T 1mda_H 60 GHSLGA--FLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVH-IIGNCASS 135 (368)
T ss_dssp EEEEEC--TTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTT-SEEECTTS
T ss_pred EEEeCC--CCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcc-eEEEcCCC
Confidence 456666 468 8999988999999872 578999999988765443332 4699 99999998
Q ss_pred -CEEEEeCC-Cc-EEE--EcCCCeEEEcCCc---CCccc----EEEccCCcEEEEeCCC------CCC--------Cccc
Q 018474 106 -GVILCDNE-KG-LLK--VTEEGVEAIVPDA---SFTND----VIAASDGTLYFTVAST------KYT--------PTDF 159 (355)
Q Consensus 106 -~L~v~~~~-~g-l~~--~~~~g~~~~~~~~---~~~~~----l~~d~dG~ly~~d~~~------~~~--------~~~~ 159 (355)
.|||+... .. +.. +|...++.+.... ..|.+ ++..++|++.+.+... +.. +...
T Consensus 136 k~lyVan~~~~~~v~V~~iD~~tv~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~ 215 (368)
T 1mda_H 136 ACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQ 215 (368)
T ss_dssp SCEEEEECSSSCEEEEEETTTEEEEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSC
T ss_pred CEEEEEccCCCCeEEEEEEchhhceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCC
Confidence 59999754 23 444 4531133332210 11111 2333455433222211 000 0000
Q ss_pred ------cccccccCCCCeEEEEeCCCCeEEEeec----------ccccccc---EEEeCCCCEEEEEeC---C-----CC
Q 018474 160 ------YKDMAEGKPYGQLRKYDPKLKETTVLHE----------GFYFANG---IALSKNEDFVVVCES---W-----KF 212 (355)
Q Consensus 160 ------~~~~~~~~~~g~l~~~dp~~~~~~~~~~----------~~~~png---i~~~~dg~~l~v~~~---~-----~~ 212 (355)
...++.-+. +.++.+|..+++.+.... ....|.| +++++|++.+|++.. . .+
T Consensus 216 P~~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~ 294 (368)
T 1mda_H 216 AAQANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAE 294 (368)
T ss_dssp CEEETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEE
T ss_pred ccccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCC
Confidence 000011111 567777875443222211 1234556 899999999999754 3 35
Q ss_pred eEEEEEeCCCCCcceeEecccCCCCcCceEECCCCC-EEEEee-cCCchhhHhhhcchhHHHHHHhccchhhcccCCCCC
Q 018474 213 RCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGS-FWIGLI-KMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSD 290 (355)
Q Consensus 213 ~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~-lwv~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (355)
++.++|.+..+. ...+ ..+..|.++.+++||+ +|+++. ..
T Consensus 295 ~~~ViD~~t~~v--v~~i--~vg~~p~gi~~s~Dg~~l~va~~~~~---------------------------------- 336 (368)
T 1mda_H 295 NTSSVTASVGQT--SGPI--SNGHDSDAIIAAQDGASDNYANSAGT---------------------------------- 336 (368)
T ss_dssp EEEEEESSSCCE--EECC--EEEEEECEEEECCSSSCEEEEEETTT----------------------------------
T ss_pred CEEEEECCCCeE--EEEE--ECCCCcceEEECCCCCEEEEEccCCC----------------------------------
Confidence 778898754321 1111 1223589999999996 899887 32
Q ss_pred CceEEEEEeCCCCeEEEEEEC
Q 018474 291 AGARVVKVDGNDGKIIRDFND 311 (355)
Q Consensus 291 ~~~~v~~~~~~~g~~~~~~~~ 311 (355)
+.|..+|.++++.+..+..
T Consensus 337 --~~VsVID~~t~kvv~~I~v 355 (368)
T 1mda_H 337 --EVLDIYDAASDQDQSSVEL 355 (368)
T ss_dssp --TEEEEEESSSCEEEEECCC
T ss_pred --CeEEEEECCCCcEEEEEEC
Confidence 4689999878888888764
No 139
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.89 E-value=1.2e-06 Score=87.72 Aligned_cols=252 Identities=15% Similarity=0.133 Sum_probs=146.9
Q ss_pred CCCceEEEeeCCCeEEEEecCCEEEEEEcCCCeeEEeeccCCCcccCeEECCCCCEEEEeCCCcEEEEc-CC-----C-e
Q 018474 52 NHPEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVT-EE-----G-V 124 (355)
Q Consensus 52 ~~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~~~~~~~p~~gl~~d~~g~L~v~~~~~gl~~~~-~~-----g-~ 124 (355)
..+.++++.++ +.+.++ .++.|+.+|..+++...+......+. .+++.++|+..+....+.|+.++ .+ + .
T Consensus 82 ~~v~~~~~spd-~~~~~~-~~~~i~~~d~~~~~~~~l~~~~~~~~-~~~~SpdG~~la~~~~~~i~v~~~~~~~~~~g~~ 158 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLF-TQGGLVGFDMLARKVTYLFDTNEETA-SLDFSPVGDRVAYVRNHNLYIARGGKLGEGMSRA 158 (706)
T ss_dssp CCCEEEEETTT-TEEEEE-ETTEEEEEETTTTEEEEEECCTTCCT-TCEECTTSSEEEEEETTEEEEEECBCTTSCCCCC
T ss_pred cCceeEEECCC-CeEEEE-ECCEEEEEECCCCceEEccCCccccc-CCcCCCCCCEEEEEECCeEEEEecCcccccCCCc
Confidence 45788999965 666655 46899999998888776655445677 89999999754444455688887 46 7 4
Q ss_pred EEEcCCc-C--------------CcccEEEccCCc-EEEEeCCCCCCCcccc---------------ccc-cccCCCCeE
Q 018474 125 EAIVPDA-S--------------FTNDVIAASDGT-LYFTVASTKYTPTDFY---------------KDM-AEGKPYGQL 172 (355)
Q Consensus 125 ~~~~~~~-~--------------~~~~l~~d~dG~-ly~~d~~~~~~~~~~~---------------~~~-~~~~~~g~l 172 (355)
..+.... . .+.++.++|||+ |.++.... -.+.... +.. -.......+
T Consensus 159 ~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~-~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l 237 (706)
T 2z3z_A 159 IAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQ-SMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTV 237 (706)
T ss_dssp EESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEEC-TTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEE
T ss_pred EEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECC-CCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEE
Confidence 4433221 1 158899999995 55543110 0000000 000 001123579
Q ss_pred EEEeCCCCeEEEeecc---ccccccEEEeCCCCEEEEEeCCC----CeEEEEEeCCCCCcceeEec-ccCCC---CcCce
Q 018474 173 RKYDPKLKETTVLHEG---FYFANGIALSKNEDFVVVCESWK----FRCRRYWLKGDRAGILDAFI-ENLPG---GPDNI 241 (355)
Q Consensus 173 ~~~dp~~~~~~~~~~~---~~~pngi~~~~dg~~l~v~~~~~----~~i~~~~~~~~~~~~~~~~~-~~~~g---~p~~i 241 (355)
+.||.++++...+... ......++++|||+.++++.... ..|+.+++++.. ..+.+. +.... ....+
T Consensus 238 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~--~~~~~~~~~~~~~~~~~~~~ 315 (706)
T 2z3z_A 238 GIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGR--FVRTLFVETDKHYVEPLHPL 315 (706)
T ss_dssp EEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCC--EEEEEEEEECSSCCCCCSCC
T ss_pred EEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCc--eeeEEEEccCCCeECccCCc
Confidence 9999988887655422 12345789999999888865433 378888875431 222222 11111 12457
Q ss_pred EECC--CCCEEEEeecCCchhhHhhhcchhHHHHHHhccchhhcccCCCCCCceEEEEEeCCCCeEEEEEECCCCCcccc
Q 018474 242 NLAP--DGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISF 319 (355)
Q Consensus 242 ~~d~--~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~ 319 (355)
.+++ +|++.++.... ....|+.++. +++....++.... .
T Consensus 316 ~~sp~~dg~~l~~~~~~----------------------------------g~~~l~~~~~-~~~~~~~l~~~~~----~ 356 (706)
T 2z3z_A 316 TFLPGSNNQFIWQSRRD----------------------------------GWNHLYLYDT-TGRLIRQVTKGEW----E 356 (706)
T ss_dssp EECTTCSSEEEEEECTT----------------------------------SSCEEEEEET-TSCEEEECCCSSS----C
T ss_pred eeecCCCCEEEEEEccC----------------------------------CccEEEEEEC-CCCEEEecCCCCe----E
Confidence 8888 88755444321 1235888887 7766666644322 1
Q ss_pred eeE-EEE--eCCEEEEeecCCC----eEEEeeCCCC
Q 018474 320 VTS-AAE--FDGNLYLASLQSN----FIGILPLDGP 348 (355)
Q Consensus 320 ~~~-~~~--~~g~L~v~~~~~~----~i~~~~~~~~ 348 (355)
+.. +.. +++.||+++...+ .|.++++.+.
T Consensus 357 v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~ 392 (706)
T 2z3z_A 357 VTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGG 392 (706)
T ss_dssp EEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCC
T ss_pred EEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCC
Confidence 222 232 3456777766544 6777766543
No 140
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.88 E-value=4e-07 Score=84.26 Aligned_cols=136 Identities=11% Similarity=0.002 Sum_probs=92.7
Q ss_pred eCCCeEEEEec-----CCEEEEEEcCCCeeEEeeccCCCcccCeEECCCCC-EEEEeC----------CCcEEEEcC-CC
Q 018474 61 VSKGALYTATR-----DGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGG-VILCDN----------EKGLLKVTE-EG 123 (355)
Q Consensus 61 ~~~g~l~~~~~-----~g~i~~~~~~~g~~~~~~~~~~~p~~gl~~d~~g~-L~v~~~----------~~gl~~~~~-~g 123 (355)
|+++.+|+.+. ++.|..+|..+++.......+..| +++++++|+ |||++. .+.+..+|. ++
T Consensus 42 pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P--~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~ 119 (386)
T 3sjl_D 42 PDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP--NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTL 119 (386)
T ss_dssp CCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC--cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCC
Confidence 46788999876 578999999998876555555666 499999986 899873 123777784 55
Q ss_pred --eEEEcCC-------cCCcccEEEccCC-cEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeecc----c
Q 018474 124 --VEAIVPD-------ASFTNDVIAASDG-TLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEG----F 189 (355)
Q Consensus 124 --~~~~~~~-------~~~~~~l~~d~dG-~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~----~ 189 (355)
+..+... ...|..+++++|| .+|+++.. ..+.+..+|.+++++..-..- .
T Consensus 120 ~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~----------------~~~~VsVID~~t~~vv~tI~v~g~~~ 183 (386)
T 3sjl_D 120 LPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFS----------------PAPAVGVVDLEGKAFKRMLDVPDCYH 183 (386)
T ss_dssp CEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECS----------------SSCEEEEEETTTTEEEEEEECCSEEE
T ss_pred eEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcC----------------CCCeEEEEECCCCcEEEEEECCCcce
Confidence 4444221 1479999999999 69998642 135788999988876433221 1
Q ss_pred ccccc----EEEeCCCCEEEEEeCCCCeE
Q 018474 190 YFANG----IALSKNEDFVVVCESWKFRC 214 (355)
Q Consensus 190 ~~png----i~~~~dg~~l~v~~~~~~~i 214 (355)
..|.| +++++||+.+|+.....+.+
T Consensus 184 ~~P~g~~~~~~~~~DG~~~~v~~~~~g~v 212 (386)
T 3sjl_D 184 IFPTAPDTFFMHCRDGSLAKVAFGTEGTP 212 (386)
T ss_dssp EEEEETTEEEEEETTSCEEEEECCSSSCC
T ss_pred eecCCCceeEEECCCCCEEEEECCCCCeE
Confidence 23444 47888888666654333444
No 141
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=98.88 E-value=2.9e-06 Score=77.08 Aligned_cols=227 Identities=13% Similarity=0.072 Sum_probs=140.2
Q ss_pred CceEEEeeCCCeEEEEecCCEEEEEEcCCCe----e-EEeeccCCCcccCeEECCCCCEEEEeCCCcEEEEc-CCC--eE
Q 018474 54 PEDVSVVVSKGALYTATRDGWVKYFILHNET----L-VNWKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVT-EEG--VE 125 (355)
Q Consensus 54 p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~----~-~~~~~~~~~p~~gl~~d~~g~L~v~~~~~gl~~~~-~~g--~~ 125 (355)
..++++.+++..+.++..++.+..++..+++ . ..+....+... .+.+.+++.+..+...+.+..++ .++ ..
T Consensus 100 v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~ 178 (340)
T 1got_B 100 VMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLS-CCRFLDDNQIVTSSGDTTCALWDIETGQQTT 178 (340)
T ss_dssp EEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEE-EEEEEETTEEEEEETTSCEEEEETTTTEEEE
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEE-EEEECCCCcEEEEECCCcEEEEECCCCcEEE
Confidence 4567788777778888889999999976542 1 12222223455 67777777777776555566666 456 45
Q ss_pred EEcCCcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeec-cccccccEEEeCCCCEE
Q 018474 126 AIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHE-GFYFANGIALSKNEDFV 204 (355)
Q Consensus 126 ~~~~~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~-~~~~pngi~~~~dg~~l 204 (355)
.+......+.++++.++|+++++.+. .+.+..||..+++...... .....+.++++|+++.+
T Consensus 179 ~~~~h~~~v~~~~~~~~~~~l~sg~~-----------------d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l 241 (340)
T 1got_B 179 TFTGHTGDVMSLSLAPDTRLFVSGAC-----------------DASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAF 241 (340)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEET-----------------TSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEE
T ss_pred EEcCCCCceEEEEECCCCCEEEEEeC-----------------CCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEE
Confidence 55444467889999999988776543 5678888887775433322 23346789999999955
Q ss_pred EEEeCCCCeEEEEEeCCCCCcceeEecc-cCCCCcCceEECCCCCEEEEeecCCchhhHhhhcchhHHHHHHhccchhhc
Q 018474 205 VVCESWKFRCRRYWLKGDRAGILDAFIE-NLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISL 283 (355)
Q Consensus 205 ~v~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (355)
.. ....+.|..|++.... ....+.. ........+.++++|++.++....
T Consensus 242 ~s-~s~d~~v~iwd~~~~~--~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d--------------------------- 291 (340)
T 1got_B 242 AT-GSDDATCRLFDLRADQ--ELMTYSHDNIICGITSVSFSKSGRLLLAGYDD--------------------------- 291 (340)
T ss_dssp EE-EETTSCEEEEETTTTE--EEEEECCTTCCSCEEEEEECTTSSEEEEEETT---------------------------
T ss_pred EE-EcCCCcEEEEECCCCc--EEEEEccCCcccceEEEEECCCCCEEEEECCC---------------------------
Confidence 44 4566789889875421 1112210 111113446789999877766542
Q ss_pred ccCCCCCCceEEEEEeCCCCeEEEEEECCCCCcccceeEEEEeC-CEEEEeecCCCeEE
Q 018474 284 LLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFD-GNLYLASLQSNFIG 341 (355)
Q Consensus 284 ~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~-g~L~v~~~~~~~i~ 341 (355)
+.|..+|..+++....+..+.+ .+..+.... +++.++......|.
T Consensus 292 ---------~~i~vwd~~~~~~~~~~~~h~~----~v~~~~~s~dg~~l~s~s~D~~i~ 337 (340)
T 1got_B 292 ---------FNCNVWDALKADRAGVLAGHDN----RVSCLGVTDDGMAVATGSWDSFLK 337 (340)
T ss_dssp ---------SEEEEEETTTCCEEEEEECCSS----CEEEEEECTTSSCEEEEETTSCEE
T ss_pred ---------CeEEEEEcccCcEeeEeecCCC----cEEEEEEcCCCCEEEEEcCCccEE
Confidence 4577788657777777776554 355555543 44333333344443
No 142
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=98.87 E-value=2.2e-06 Score=79.73 Aligned_cols=230 Identities=10% Similarity=0.060 Sum_probs=143.2
Q ss_pred EEeeCCCeEEEEecCCEEEEEEcCCCeeEEeec-cCCCcccCeEECCCCCEEEEeCCCc-EEEEc-CCC--eEEEcCCcC
Q 018474 58 SVVVSKGALYTATRDGWVKYFILHNETLVNWKH-IDSQSLLGLTTTKDGGVILCDNEKG-LLKVT-EEG--VEAIVPDAS 132 (355)
Q Consensus 58 ~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~~~-~~~~p~~gl~~d~~g~L~v~~~~~g-l~~~~-~~g--~~~~~~~~~ 132 (355)
++.+++..|.+++.+|.|..++..+++...... ....+. ++++.++|+++++...++ +..++ .++ +..+.....
T Consensus 104 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~ 182 (420)
T 3vl1_A 104 TAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEIT-KLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRA 182 (420)
T ss_dssp EECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEE-EEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSS
T ss_pred EEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccE-EEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCC
Confidence 345456677788889999999988777655432 234567 899999998655544444 55666 455 555554446
Q ss_pred CcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeecc------------------------
Q 018474 133 FTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEG------------------------ 188 (355)
Q Consensus 133 ~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~------------------------ 188 (355)
.+.+++++++|+..++.+. .+.+..||..+++.......
T Consensus 183 ~v~~~~~~~~~~~l~s~~~-----------------d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 245 (420)
T 3vl1_A 183 TVTDIAIIDRGRNVLSASL-----------------DGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEI 245 (420)
T ss_dssp CEEEEEEETTTTEEEEEET-----------------TSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGG
T ss_pred cEEEEEEcCCCCEEEEEcC-----------------CCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeec
Confidence 7889999999976665433 45677777766654332221
Q ss_pred -ccccccEEEeCCCCEEEEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCC-EEEEeecCCchhhHhhhc
Q 018474 189 -FYFANGIALSKNEDFVVVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGS-FWIGLIKMNQTGVRAIQK 266 (355)
Q Consensus 189 -~~~pngi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~-lwv~~~~~~~~~~~~~~~ 266 (355)
......++++|+++.++.+ ...+.|..|++.... ....+..........+.++++|. +.++....
T Consensus 246 ~~~~v~~~~~s~~~~~l~~~-~~dg~i~i~d~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~d---------- 312 (420)
T 3vl1_A 246 STSKKNNLEFGTYGKYVIAG-HVSGVITVHNVFSKE--QTIQLPSKFTCSCNSLTVDGNNANYIYAGYEN---------- 312 (420)
T ss_dssp CCCCCCTTCSSCTTEEEEEE-ETTSCEEEEETTTCC--EEEEECCTTSSCEEEEEECSSCTTEEEEEETT----------
T ss_pred ccCcccceEEcCCCCEEEEE-cCCCeEEEEECCCCc--eeEEcccccCCCceeEEEeCCCCCEEEEEeCC----------
Confidence 1223456788999866554 456789999985432 12222222223345678888887 55544331
Q ss_pred chhHHHHHHhccchhhcccCCCCCCceEEEEEeCCCCe-EEEEEECCCCCcccceeEEEEeCCEEEEeecCCCeEEEeeC
Q 018474 267 CREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGK-IIRDFNDPDATYISFVTSAAEFDGNLYLASLQSNFIGILPL 345 (355)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~-~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~~~i~~~~~ 345 (355)
+.|..+|..+++ .+..+....+. .++.+...+++++++......|...++
T Consensus 313 --------------------------g~i~vwd~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~l~s~~~d~~v~iw~~ 363 (420)
T 3vl1_A 313 --------------------------GMLAQWDLRSPECPVGEFLINEGT---PINNVYFAAGALFVSSGFDTSIKLDII 363 (420)
T ss_dssp --------------------------SEEEEEETTCTTSCSEEEEESTTS---CEEEEEEETTEEEEEETTTEEEEEEEE
T ss_pred --------------------------CeEEEEEcCCCcCchhhhhccCCC---CceEEEeCCCCEEEEecCCccEEEEec
Confidence 457777864443 24555443322 455555667777777766788888887
Q ss_pred CC
Q 018474 346 DG 347 (355)
Q Consensus 346 ~~ 347 (355)
..
T Consensus 364 ~~ 365 (420)
T 3vl1_A 364 SD 365 (420)
T ss_dssp CC
T ss_pred cC
Confidence 66
No 143
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=98.87 E-value=1.6e-06 Score=79.31 Aligned_cols=232 Identities=11% Similarity=0.075 Sum_probs=144.0
Q ss_pred CceEEEeeCCCeEEEEecCCEEEEEEcCCCeeEEe---ec--cCCCcccCeEECCCCCEEEEeCCCc-EEEEc-CCC--e
Q 018474 54 PEDVSVVVSKGALYTATRDGWVKYFILHNETLVNW---KH--IDSQSLLGLTTTKDGGVILCDNEKG-LLKVT-EEG--V 124 (355)
Q Consensus 54 p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~---~~--~~~~p~~gl~~d~~g~L~v~~~~~g-l~~~~-~~g--~ 124 (355)
-.++++. .++.+.+++.+|.|..+|..+++.... .. ..+.+. ++++.++|+++++...++ +..++ .++ +
T Consensus 85 v~~~~~s-~d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~-~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~ 162 (344)
T 4gqb_B 85 VADLTWV-GERGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVS-TVSVLSSGTQAVSGSKDICIKVWDLAQQVVL 162 (344)
T ss_dssp EEEEEEE-TTTEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEE-EEEECTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred EEEEEEe-CCCeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEE-EEEECCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence 3568888 567888999999999999877753221 11 123467 899999998766655555 44555 466 5
Q ss_pred EEEcCCcCCcccEEEccCC-cEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEE-eec--cccccccEEEeCC
Q 018474 125 EAIVPDASFTNDVIAASDG-TLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTV-LHE--GFYFANGIALSKN 200 (355)
Q Consensus 125 ~~~~~~~~~~~~l~~d~dG-~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~-~~~--~~~~pngi~~~~d 200 (355)
..+......++.+++.+++ +++++.+. .+.+..||..+++... +.. .......++++|+
T Consensus 163 ~~~~~h~~~V~~~~~~~~~~~~l~s~s~-----------------D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~ 225 (344)
T 4gqb_B 163 SSYRAHAAQVTCVAASPHKDSVFLSCSE-----------------DNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQ 225 (344)
T ss_dssp EEECCCSSCEEEEEECSSCTTEEEEEET-----------------TSCEEEEETTSSSCEEECC----CCCEEEEEECSS
T ss_pred EEEcCcCCceEEEEecCCCCCceeeecc-----------------ccccccccccccceeeeeecceeeccceeeeecCC
Confidence 5555444678899999987 57766433 4568888887765432 211 1223567889987
Q ss_pred CCEEEEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCC-EEEEeecCCchhhHhhhcchhHHHHHHhccc
Q 018474 201 EDFVVVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGS-FWIGLIKMNQTGVRAIQKCREKWELLDAYPG 279 (355)
Q Consensus 201 g~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~-lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (355)
+..++++....+.|..|+++..+. ...+. ........+++.++|. +.++....
T Consensus 226 ~~~~l~sg~~dg~v~~wd~~~~~~--~~~~~-~h~~~v~~v~fsp~g~~~lasgs~D----------------------- 279 (344)
T 4gqb_B 226 QSEVFVFGDENGTVSLVDTKSTSC--VLSSA-VHSQCVTGLVFSPHSVPFLASLSED----------------------- 279 (344)
T ss_dssp CTTEEEEEETTSEEEEEESCC--C--CEEEE-CCSSCEEEEEECSSSSCCEEEEETT-----------------------
T ss_pred CCcceEEeccCCcEEEEECCCCcE--EEEEc-CCCCCEEEEEEccCCCeEEEEEeCC-----------------------
Confidence 665777766778899999854321 22222 2222345577888884 44443321
Q ss_pred hhhcccCCCCCCceEEEEEeCCCCeEEEEEECCCCCcccceeEEEEe--CCEEEEeecCCCeEEEeeCCCC
Q 018474 280 LISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF--DGNLYLASLQSNFIGILPLDGP 348 (355)
Q Consensus 280 ~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~--~g~L~v~~~~~~~i~~~~~~~~ 348 (355)
+.|..+|.+.++.+ .+..+.+ .+..+... +.+|..+.-....|....+++.
T Consensus 280 -------------~~i~vwd~~~~~~~-~~~~H~~----~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~ 332 (344)
T 4gqb_B 280 -------------CSLAVLDSSLSELF-RSQAHRD----FVRDATWSPLNHSLLTTVGWDHQVVHHVVPTE 332 (344)
T ss_dssp -------------SCEEEECTTCCEEE-EECCCSS----CEEEEEECSSSTTEEEEEETTSCEEEEECCC-
T ss_pred -------------CeEEEEECCCCcEE-EEcCCCC----CEEEEEEeCCCCeEEEEEcCCCeEEEEECCCC
Confidence 34777787455543 3434333 56667764 3456665555778888777654
No 144
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.86 E-value=7.8e-07 Score=82.35 Aligned_cols=182 Identities=9% Similarity=0.017 Sum_probs=118.0
Q ss_pred CCCCceEEEeeCCCeEEEEecCCEEEEEEcCCCeeEEeeccC-CC---------------cccCeEECCCCCEEEEeCCC
Q 018474 51 VNHPEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHID-SQ---------------SLLGLTTTKDGGVILCDNEK 114 (355)
Q Consensus 51 ~~~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~~~~~-~~---------------p~~gl~~d~~g~L~v~~~~~ 114 (355)
-....++++.+++..++++..+|.|..++..+++........ .. +. .+.+.+++.++++...+
T Consensus 149 ~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g 227 (425)
T 1r5m_A 149 RAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGV-DVEWVDDDKFVIPGPKG 227 (425)
T ss_dssp CSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC---------------CCCBS-CCEEEETTEEEEECGGG
T ss_pred CccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceee-EEEEcCCCEEEEEcCCC
Confidence 355678899877777888889999999999887654332221 11 56 88888888887777665
Q ss_pred cEEEEc-CCC--eEEEcCCcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEee-cccc
Q 018474 115 GLLKVT-EEG--VEAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH-EGFY 190 (355)
Q Consensus 115 gl~~~~-~~g--~~~~~~~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~-~~~~ 190 (355)
.+..++ .++ ...+......+..++++++|+++++... .+.+..||..+++..... ....
T Consensus 228 ~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-----------------d~~i~i~d~~~~~~~~~~~~~~~ 290 (425)
T 1r5m_A 228 AIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASD-----------------DGTLRIWHGGNGNSQNCFYGHSQ 290 (425)
T ss_dssp CEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEET-----------------TSCEEEECSSSBSCSEEECCCSS
T ss_pred eEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcC-----------------CCEEEEEECCCCccceEecCCCc
Confidence 677777 444 5555444467888999999976665432 456888887665432222 2233
Q ss_pred ccccEEEeCCCCEEEEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCCEEEEeec
Q 018474 191 FANGIALSKNEDFVVVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIK 255 (355)
Q Consensus 191 ~pngi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~ 255 (355)
....+++++++ .+++....+.|..|+++... ....+. ........+.++++|++.++...
T Consensus 291 ~i~~~~~~~~~--~l~~~~~d~~i~i~d~~~~~--~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~ 350 (425)
T 1r5m_A 291 SIVSASWVGDD--KVISCSMDGSVRLWSLKQNT--LLALSI-VDGVPIFAGRISQDGQKYAVAFM 350 (425)
T ss_dssp CEEEEEEETTT--EEEEEETTSEEEEEETTTTE--EEEEEE-CTTCCEEEEEECTTSSEEEEEET
T ss_pred cEEEEEECCCC--EEEEEeCCCcEEEEECCCCc--EeEecc-cCCccEEEEEEcCCCCEEEEEEC
Confidence 45678999998 44445567889999975422 112221 22233556788888986666544
No 145
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=98.86 E-value=9.6e-06 Score=73.15 Aligned_cols=185 Identities=11% Similarity=0.095 Sum_probs=115.4
Q ss_pred CCCCCCceEEEeeC----CCeEEEEecCCEEEEEEcCCCeeEE-eecc--CCCcccCeEECCCCCEEEEeCCCcEE-EEc
Q 018474 49 GCVNHPEDVSVVVS----KGALYTATRDGWVKYFILHNETLVN-WKHI--DSQSLLGLTTTKDGGVILCDNEKGLL-KVT 120 (355)
Q Consensus 49 ~~~~~p~~i~~d~~----~g~l~~~~~~g~i~~~~~~~g~~~~-~~~~--~~~p~~gl~~d~~g~L~v~~~~~gl~-~~~ 120 (355)
+.-..-.++++.++ +..|..++.|+.|..++..+++... +... ..... ++.+.+++.+.++...++.+ .++
T Consensus 30 ~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~-~~~~~~~~~~l~s~s~D~~i~lWd 108 (321)
T 3ow8_A 30 AHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVV-SVDISHTLPIAASSSLDAHIRLWD 108 (321)
T ss_dssp SSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEE-EEEECSSSSEEEEEETTSEEEEEE
T ss_pred cCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEE-EEEECCCCCEEEEEeCCCcEEEEE
Confidence 33344567777532 4567888899999888876665432 2211 22355 77888888877765555544 445
Q ss_pred -CCC--eEEEcCCcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEe-eccccccccEE
Q 018474 121 -EEG--VEAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVL-HEGFYFANGIA 196 (355)
Q Consensus 121 -~~g--~~~~~~~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~-~~~~~~pngi~ 196 (355)
.++ ++.+......+..++++|+|+..++... .+.+..||.++++.... .........++
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~-----------------dg~v~i~~~~~~~~~~~~~~~~~~v~~~~ 171 (321)
T 3ow8_A 109 LENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTH-----------------VGKVNIFGVESGKKEYSLDTRGKFILSIA 171 (321)
T ss_dssp TTTTEEEEEEECCTTCCCCEEECTTSSEEEEECT-----------------TSEEEEEETTTCSEEEEEECSSSCEEEEE
T ss_pred CCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcC-----------------CCcEEEEEcCCCceeEEecCCCceEEEEE
Confidence 455 5555444456778999999987776443 56788888876654432 22233456789
Q ss_pred EeCCCCEEEEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCCEEEEeec
Q 018474 197 LSKNEDFVVVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIK 255 (355)
Q Consensus 197 ~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~ 255 (355)
++||++.+..+ ...+.|..|++...+ ....+. ........+.++++|++.++...
T Consensus 172 ~spdg~~lasg-~~dg~i~iwd~~~~~--~~~~~~-~h~~~v~~l~~spd~~~l~s~s~ 226 (321)
T 3ow8_A 172 YSPDGKYLASG-AIDGIINIFDIATGK--LLHTLE-GHAMPIRSLTFSPDSQLLVTASD 226 (321)
T ss_dssp ECTTSSEEEEE-ETTSCEEEEETTTTE--EEEEEC-CCSSCCCEEEECTTSCEEEEECT
T ss_pred ECCCCCEEEEE-cCCCeEEEEECCCCc--EEEEEc-ccCCceeEEEEcCCCCEEEEEcC
Confidence 99999966555 456789899875432 122222 22233466889999987776544
No 146
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=98.86 E-value=3e-06 Score=79.24 Aligned_cols=152 Identities=6% Similarity=0.005 Sum_probs=102.9
Q ss_pred CCCCceEEEeeCCCeEEEEecCCEEEEEEcCCCeeEEeec-cCCCcccCeEECCCCCEEEEeCCCc-EEEEcC-CC--eE
Q 018474 51 VNHPEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKH-IDSQSLLGLTTTKDGGVILCDNEKG-LLKVTE-EG--VE 125 (355)
Q Consensus 51 ~~~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~~~-~~~~p~~gl~~d~~g~L~v~~~~~g-l~~~~~-~g--~~ 125 (355)
-....++++.|.+..+..++.+|.|..+|..+++...... ....+. +++++++|++.++...++ +..++. ++ +.
T Consensus 108 ~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~-~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~ 186 (410)
T 1vyh_C 108 RSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQ-DISFDHSGKLLASCSADMTIKLWDFQGFECIR 186 (410)
T ss_dssp SSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEE-EEEECTTSSEEEEEETTSCCCEEETTSSCEEE
T ss_pred CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEE-EEEEcCCCCEEEEEeCCCeEEEEeCCCCceeE
Confidence 3455688899777778888999999999998886544332 234466 899999998766554545 444453 44 44
Q ss_pred EEcCCcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEE-EeeccccccccEEEeCCCCEE
Q 018474 126 AIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETT-VLHEGFYFANGIALSKNEDFV 204 (355)
Q Consensus 126 ~~~~~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~-~~~~~~~~pngi~~~~dg~~l 204 (355)
.+......+.++++.++|...++.+. .+.+..||..+++.. .+.........+++++|++.+
T Consensus 187 ~~~~h~~~V~~v~~~p~~~~l~s~s~-----------------D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l 249 (410)
T 1vyh_C 187 TMHGHDHNVSSVSIMPNGDHIVSASR-----------------DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLI 249 (410)
T ss_dssp CCCCCSSCEEEEEECSSSSEEEEEET-----------------TSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEE
T ss_pred EEcCCCCCEEEEEEeCCCCEEEEEeC-----------------CCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEE
Confidence 44433467889999999987666433 567888898777543 333223334678899999854
Q ss_pred EEEeCCCCeEEEEEeCC
Q 018474 205 VVCESWKFRCRRYWLKG 221 (355)
Q Consensus 205 ~v~~~~~~~i~~~~~~~ 221 (355)
++....+.|..|++..
T Consensus 250 -~s~s~D~~v~vwd~~~ 265 (410)
T 1vyh_C 250 -ASCSNDQTVRVWVVAT 265 (410)
T ss_dssp -EEEETTSCEEEEETTT
T ss_pred -EEEcCCCeEEEEECCC
Confidence 4445567888888754
No 147
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=98.86 E-value=3.4e-06 Score=75.36 Aligned_cols=236 Identities=8% Similarity=0.055 Sum_probs=140.3
Q ss_pred CCCCceEEEeeCCCeEEEEecCCEEEEEEcCCCeeEEeec-cCCCcccCeEECCCCCEEEEeCCCc-EEEEc-CCC--eE
Q 018474 51 VNHPEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKH-IDSQSLLGLTTTKDGGVILCDNEKG-LLKVT-EEG--VE 125 (355)
Q Consensus 51 ~~~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~~~-~~~~p~~gl~~d~~g~L~v~~~~~g-l~~~~-~~g--~~ 125 (355)
-..-.++++.|++..+..+..+|.|..+|..+++...... ...... .+++.++++++++...++ +..++ .++ +.
T Consensus 13 ~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~ 91 (304)
T 2ynn_A 13 SDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVR-AGKFIARKNWIIVGSDDFRIRVFNYNTGEKVV 91 (304)
T ss_dssp CSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEE-EEEEEGGGTEEEEEETTSEEEEEETTTCCEEE
T ss_pred CCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEE-EEEEeCCCCEEEEECCCCEEEEEECCCCcEEE
Confidence 3556789999877788889999999999998876543322 233455 788888888666554555 44455 455 55
Q ss_pred EEcCCcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCC-eEEEeec-cccccccEEEeC-CCC
Q 018474 126 AIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLK-ETTVLHE-GFYFANGIALSK-NED 202 (355)
Q Consensus 126 ~~~~~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~-~~~~~~~-~~~~pngi~~~~-dg~ 202 (355)
.+......++++++.|++.+.++.+. .+.+..||.+++ ....... .......++++| +++
T Consensus 92 ~~~~h~~~v~~~~~~~~~~~l~sgs~-----------------D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~ 154 (304)
T 2ynn_A 92 DFEAHPDYIRSIAVHPTKPYVLSGSD-----------------DLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPS 154 (304)
T ss_dssp EEECCSSCEEEEEECSSSSEEEEEET-----------------TSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTT
T ss_pred EEeCCCCcEEEEEEcCCCCEEEEECC-----------------CCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCC
Confidence 55544467899999999987776443 456777876555 3322222 223356789998 556
Q ss_pred EEEEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEE--CCCCCEEEEeecCCchhhHhhhcchhHHHHHHhccch
Q 018474 203 FVVVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINL--APDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGL 280 (355)
Q Consensus 203 ~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~--d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (355)
++++....+.|..|++..... ... +..........+.+ .+++.+.++....
T Consensus 155 -~l~sgs~D~~v~iwd~~~~~~-~~~-~~~~~~~~v~~~~~~~~~~~~~l~s~s~D------------------------ 207 (304)
T 2ynn_A 155 -TFASGCLDRTVKVWSLGQSTP-NFT-LTTGQERGVNYVDYYPLPDKPYMITASDD------------------------ 207 (304)
T ss_dssp -EEEEEETTSEEEEEETTCSSC-SEE-EECCCTTCEEEEEECCSTTCCEEEEEETT------------------------
T ss_pred -EEEEEeCCCeEEEEECCCCCc-cce-eccCCcCcEEEEEEEEcCCCCEEEEEcCC------------------------
Confidence 555556678899998743221 111 11111111112233 3466666655432
Q ss_pred hhcccCCCCCCceEEEEEeCCCCeEEEEEECCCCCcccceeEEEEeC-CEEEEeecCCCeEEEeeCCC
Q 018474 281 ISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFD-GNLYLASLQSNFIGILPLDG 347 (355)
Q Consensus 281 ~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~-g~L~v~~~~~~~i~~~~~~~ 347 (355)
+.|..+|.++++.+..+..+.+ .++.+.... +.+.++......|...++.+
T Consensus 208 ------------~~i~iWd~~~~~~~~~~~~h~~----~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~ 259 (304)
T 2ynn_A 208 ------------LTIKIWDYQTKSCVATLEGHMS----NVSFAVFHPTLPIIISGSEDGTLKIWNSST 259 (304)
T ss_dssp ------------SEEEEEETTTTEEEEEEECCSS----CEEEEEECSSSSEEEEEETTSCEEEEETTT
T ss_pred ------------CeEEEEeCCCCccceeeCCCCC----CEEEEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 3566667656777777765543 344444443 44444444456666666544
No 148
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.86 E-value=1.5e-07 Score=84.66 Aligned_cols=161 Identities=13% Similarity=0.132 Sum_probs=105.3
Q ss_pred CCcccEEEcc-CCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEe-eccc-------cccccEEE---eC
Q 018474 132 SFTNDVIAAS-DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVL-HEGF-------YFANGIAL---SK 199 (355)
Q Consensus 132 ~~~~~l~~d~-dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~-~~~~-------~~pngi~~---~~ 199 (355)
.+|.+...|+ +|.+|+++.. .+.|+++||.++..+.+ ..++ ..+.|+.+ ++
T Consensus 13 ~yPE~~~wd~~~g~~~vs~l~-----------------~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~ 75 (334)
T 2p9w_A 13 LTPEDTIYDRTRQVFYQSNLY-----------------KGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDN 75 (334)
T ss_dssp CCCSCEEEETTTTEEEEEETT-----------------TTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSS
T ss_pred cCCcCccCcCCCCEEEEEecc-----------------CCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCC
Confidence 6899999986 6899999865 67899999986654443 2322 24689999 79
Q ss_pred CCCEEEE-EeC------------CCCeEEEEEeCCCCCcceeEecc------c-------CCCCcCceEECCCCCEEEEe
Q 018474 200 NEDFVVV-CES------------WKFRCRRYWLKGDRAGILDAFIE------N-------LPGGPDNINLAPDGSFWIGL 253 (355)
Q Consensus 200 dg~~l~v-~~~------------~~~~i~~~~~~~~~~~~~~~~~~------~-------~~g~p~~i~~d~~G~lwv~~ 253 (355)
+++ ||+ ++. ....|.+|++++...++....++ . ..+.++++++|++|+.||+.
T Consensus 76 ~gr-L~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~ 154 (334)
T 2p9w_A 76 SKR-LFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAF 154 (334)
T ss_dssp CCE-EEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEE
T ss_pred CCc-EEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeC
Confidence 865 666 542 35789999987211111111111 1 22347889999999999976
Q ss_pred ecCCchhhHhhhcchhHHHHHHhccchhhcccCCCCCCceEEEEEeCCCCeEEEEEE-C-CCCCcccceeEEEEe-CC-E
Q 018474 254 IKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFN-D-PDATYISFVTSAAEF-DG-N 329 (355)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~-~-~~g~~~~~~~~~~~~-~g-~ 329 (355)
..+ .+.|++++| +|+....+. . +........++++.. +| .
T Consensus 155 s~~-----------------------------------~~~I~rV~p-dG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~ 198 (334)
T 2p9w_A 155 ALG-----------------------------------MPAIARVSA-DGKTVSTFAWESGNGGQRPGYSGITFDPHSNK 198 (334)
T ss_dssp EES-----------------------------------SCEEEEECT-TSCCEEEEEECCCCSSSCCSCSEEEEETTTTE
T ss_pred CCC-----------------------------------CCeEEEEeC-CCCEEeeeeecCCCcccccCcceEEEeCCCCE
Confidence 541 036999999 998555442 2 222222345566665 34 5
Q ss_pred EEEeecCCCeEEEeeCCC
Q 018474 330 LYLASLQSNFIGILPLDG 347 (355)
Q Consensus 330 L~v~~~~~~~i~~~~~~~ 347 (355)
|++... ..+|.++++..
T Consensus 199 Liv~~~-~g~L~~fD~~~ 215 (334)
T 2p9w_A 199 LIAFGG-PRALTAFDVSK 215 (334)
T ss_dssp EEEESS-SSSEEEEECSS
T ss_pred EEEEcC-CCeEEEEcCCC
Confidence 666665 99999999873
No 149
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.85 E-value=4.2e-06 Score=74.88 Aligned_cols=181 Identities=14% Similarity=0.127 Sum_probs=113.5
Q ss_pred CCCCceEEEeeCCCeEEEEecCCEEEEEEcCCCee----EEee--ccCCCcccCeEECCCCCEEE-EeCCCcEEEEc-CC
Q 018474 51 VNHPEDVSVVVSKGALYTATRDGWVKYFILHNETL----VNWK--HIDSQSLLGLTTTKDGGVIL-CDNEKGLLKVT-EE 122 (355)
Q Consensus 51 ~~~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~----~~~~--~~~~~p~~gl~~d~~g~L~v-~~~~~gl~~~~-~~ 122 (355)
-....++++.+++..++++. +|.|..++..+++. ..+. .....+. .+++.+++++++ +...+.+..++ .+
T Consensus 51 ~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~d~~i~~~d~~~ 128 (337)
T 1gxr_A 51 GEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIR-SCKLLPDGCTLIVGGEASTLSIWDLAA 128 (337)
T ss_dssp SSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEE-EEEECTTSSEEEEEESSSEEEEEECCC
T ss_pred CCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEE-EEEEcCCCCEEEEEcCCCcEEEEECCC
Confidence 45678899996666666666 99999999866532 2221 2234466 899999987554 44344466666 33
Q ss_pred C-e---EEEcCCcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeec-cccccccEEE
Q 018474 123 G-V---EAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHE-GFYFANGIAL 197 (355)
Q Consensus 123 g-~---~~~~~~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~-~~~~pngi~~ 197 (355)
+ . ..+......+.+++++++|+..++... .+.+..||..+++...... .......+++
T Consensus 129 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-----------------dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~ 191 (337)
T 1gxr_A 129 PTPRIKAELTSSAPACYALAISPDSKVCFSCCS-----------------DGNIAVWDLHNQTLVRQFQGHTDGASCIDI 191 (337)
T ss_dssp C--EEEEEEECSSSCEEEEEECTTSSEEEEEET-----------------TSCEEEEETTTTEEEEEECCCSSCEEEEEE
T ss_pred CCcceeeecccCCCceEEEEECCCCCEEEEEeC-----------------CCcEEEEeCCCCceeeeeecccCceEEEEE
Confidence 3 1 222233356788999999876555332 4578889987776543333 2344678899
Q ss_pred eCCCCEEEEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCCEEEEeec
Q 018474 198 SKNEDFVVVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIK 255 (355)
Q Consensus 198 ~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~ 255 (355)
+|+++.++.+. ..+.|..|+++..+. ...+ ...+....+.++++|++.+....
T Consensus 192 ~~~~~~l~~~~-~dg~i~~~d~~~~~~--~~~~--~~~~~v~~~~~s~~~~~l~~~~~ 244 (337)
T 1gxr_A 192 SNDGTKLWTGG-LDNTVRSWDLREGRQ--LQQH--DFTSQIFSLGYCPTGEWLAVGME 244 (337)
T ss_dssp CTTSSEEEEEE-TTSEEEEEETTTTEE--EEEE--ECSSCEEEEEECTTSSEEEEEET
T ss_pred CCCCCEEEEEe-cCCcEEEEECCCCce--Eeee--cCCCceEEEEECCCCCEEEEEcC
Confidence 99999666654 567899999854321 1111 22333566788888886665543
No 150
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=98.83 E-value=2.9e-06 Score=78.18 Aligned_cols=238 Identities=10% Similarity=0.012 Sum_probs=146.8
Q ss_pred CCCceEEEeeC----C---CeEEEEecCCEEEEEEcCCCe------eEEeecc-----CCCcccCeEEC----CCCCE-E
Q 018474 52 NHPEDVSVVVS----K---GALYTATRDGWVKYFILHNET------LVNWKHI-----DSQSLLGLTTT----KDGGV-I 108 (355)
Q Consensus 52 ~~p~~i~~d~~----~---g~l~~~~~~g~i~~~~~~~g~------~~~~~~~-----~~~p~~gl~~d----~~g~L-~ 108 (355)
....++++.++ + ..|+++..+|.|..++..+++ ...+... ...+. ++++. ++++. +
T Consensus 63 ~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~~~l 141 (397)
T 1sq9_A 63 SGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFW-ALKWGASNDRLLSHRL 141 (397)
T ss_dssp TCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEE-EEEEECCC----CEEE
T ss_pred CcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEE-EEEEeeccCCCCceEE
Confidence 45578889865 5 677788889999999886665 4444322 24566 88998 88875 5
Q ss_pred EE-eCCCcEEEEc-CC------C--eE-----EEcC-------CcCCcccEEEccCCcEEEEeCCCCCCCcccccccccc
Q 018474 109 LC-DNEKGLLKVT-EE------G--VE-----AIVP-------DASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEG 166 (355)
Q Consensus 109 v~-~~~~gl~~~~-~~------g--~~-----~~~~-------~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~ 166 (355)
++ ...+.+..++ .+ + +. .+.. ....+.+++++++| ++++...
T Consensus 142 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~--------------- 205 (397)
T 1sq9_A 142 VATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFN--------------- 205 (397)
T ss_dssp EEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECT---------------
T ss_pred EEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeC---------------
Confidence 54 4444455555 34 4 33 4421 22678899999999 5555433
Q ss_pred CCCCeEEEEeCCCCeEEEeecc-------ccccccEEEeCCCCEEEEEeCCC---CeEEEEEeCCCCCcceeEeccc---
Q 018474 167 KPYGQLRKYDPKLKETTVLHEG-------FYFANGIALSKNEDFVVVCESWK---FRCRRYWLKGDRAGILDAFIEN--- 233 (355)
Q Consensus 167 ~~~g~l~~~dp~~~~~~~~~~~-------~~~pngi~~~~dg~~l~v~~~~~---~~i~~~~~~~~~~~~~~~~~~~--- 233 (355)
.+.+..||..+++....... ......++++|+++.++.+. .. +.|..|++...+ ....+...
T Consensus 206 --dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~-~d~~~g~i~i~d~~~~~--~~~~~~~~~~~ 280 (397)
T 1sq9_A 206 --NGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAH-DSNSFGCITLYETEFGE--RIGSLSVPTHS 280 (397)
T ss_dssp --TSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEE-EETTEEEEEEEETTTCC--EEEEECBC---
T ss_pred --CCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEe-cCCCCceEEEEECCCCc--ccceeccCccc
Confidence 56788999877765443333 34467899999999666554 44 688889875432 12222210
Q ss_pred ---------CCCCcCceEECCCCCEEEEeecCCchhhHhhhcchhHHHHHHhccchhhcccCCCCCCceEEEEEeCCCCe
Q 018474 234 ---------LPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGK 304 (355)
Q Consensus 234 ---------~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~ 304 (355)
.......+.++++|++.++.... +.|..+|..+++
T Consensus 281 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------------------------------------g~i~iwd~~~~~ 324 (397)
T 1sq9_A 281 SQASLGEFAHSSWVMSLSFNDSGETLCSAGWD------------------------------------GKLRFWDVKTKE 324 (397)
T ss_dssp -----CCBSBSSCEEEEEECSSSSEEEEEETT------------------------------------SEEEEEETTTTE
T ss_pred ccccccccccCCcEEEEEECCCCCEEEEEeCC------------------------------------CeEEEEEcCCCc
Confidence 22334557788889876665431 467788876788
Q ss_pred EEEEEE------CC-----CCC------cccceeEEEEeC-C----------EEEEeecCCCeEEEeeCCC
Q 018474 305 IIRDFN------DP-----DAT------YISFVTSAAEFD-G----------NLYLASLQSNFIGILPLDG 347 (355)
Q Consensus 305 ~~~~~~------~~-----~g~------~~~~~~~~~~~~-g----------~L~v~~~~~~~i~~~~~~~ 347 (355)
.+..+. .. .|. ....+..+.... + +++++......|..+++++
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~ 395 (397)
T 1sq9_A 325 RITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAG 395 (397)
T ss_dssp EEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC
T ss_pred eeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCC
Confidence 888887 32 000 023466666554 3 5555555578888887654
No 151
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.82 E-value=3.5e-06 Score=77.87 Aligned_cols=230 Identities=11% Similarity=0.026 Sum_probs=140.6
Q ss_pred CCceEEEeeCCCeEEEEecCCEEEEEEcCCCe-eEEeeccCCCcccCeEECCCCCEE-EEeCCCcEEEEc-CCC--eEEE
Q 018474 53 HPEDVSVVVSKGALYTATRDGWVKYFILHNET-LVNWKHIDSQSLLGLTTTKDGGVI-LCDNEKGLLKVT-EEG--VEAI 127 (355)
Q Consensus 53 ~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~-~~~~~~~~~~p~~gl~~d~~g~L~-v~~~~~gl~~~~-~~g--~~~~ 127 (355)
...++++.+++..|+++..+|.|..++. +++ ...+......+. ++++.++++.+ .+...+.+..++ .++ ...+
T Consensus 110 ~v~~~~~s~~~~~l~~~~~dg~i~i~~~-~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 187 (425)
T 1r5m_A 110 QVTCLAWSHDGNSIVTGVENGELRLWNK-TGALLNVLNFHRAPIV-SVKWNKDGTHIISMDVENVTILWNVISGTVMQHF 187 (425)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEET-TSCEEEEECCCCSCEE-EEEECTTSSEEEEEETTCCEEEEETTTTEEEEEE
T ss_pred ceEEEEEcCCCCEEEEEeCCCeEEEEeC-CCCeeeeccCCCccEE-EEEECCCCCEEEEEecCCeEEEEECCCCcEEEEe
Confidence 5678889977777888889999999995 554 344333344567 89999988754 454444566666 455 4444
Q ss_pred cCCcCC---------------cccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEee-ccccc
Q 018474 128 VPDASF---------------TNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH-EGFYF 191 (355)
Q Consensus 128 ~~~~~~---------------~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~-~~~~~ 191 (355)
...... +.++.+.+++.++++.. .+.+..||..+++..... .....
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~g~i~~~d~~~~~~~~~~~~~~~~ 249 (425)
T 1r5m_A 188 ELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGP------------------KGAIFVYQITEKTPTGKLIGHHGP 249 (425)
T ss_dssp CCC---------------CCCBSCCEEEETTEEEEECG------------------GGCEEEEETTCSSCSEEECCCSSC
T ss_pred eccccCccceeeccccCCcceeeEEEEcCCCEEEEEcC------------------CCeEEEEEcCCCceeeeeccCCCc
Confidence 332222 77788888777655422 457888888766443222 22233
Q ss_pred cccEEEeCCCCEEEEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCCEEEEeecCCchhhHhhhcchhHH
Q 018474 192 ANGIALSKNEDFVVVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKW 271 (355)
Q Consensus 192 pngi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~ 271 (355)
...++++++++.++.+. ..+.|..|+++.... ...+. ........+.+.++| ++++....
T Consensus 250 i~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~--~~~~~-~~~~~i~~~~~~~~~-~l~~~~~d--------------- 309 (425)
T 1r5m_A 250 ISVLEFNDTNKLLLSAS-DDGTLRIWHGGNGNS--QNCFY-GHSQSIVSASWVGDD-KVISCSMD--------------- 309 (425)
T ss_dssp EEEEEEETTTTEEEEEE-TTSCEEEECSSSBSC--SEEEC-CCSSCEEEEEEETTT-EEEEEETT---------------
T ss_pred eEEEEECCCCCEEEEEc-CCCEEEEEECCCCcc--ceEec-CCCccEEEEEECCCC-EEEEEeCC---------------
Confidence 46789999999665554 567888888754221 22222 223334567788888 44443321
Q ss_pred HHHHhccchhhcccCCCCCCceEEEEEeCCCCeEEEEEECCCCCcccceeEEEEe-CCEEEEeecCCCeEEEeeCCC
Q 018474 272 ELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF-DGNLYLASLQSNFIGILPLDG 347 (355)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-~g~L~v~~~~~~~i~~~~~~~ 347 (355)
+.|..+|..+++....+..+.+ .+..+... ++++++.....+.|..+++..
T Consensus 310 ---------------------~~i~i~d~~~~~~~~~~~~~~~----~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~ 361 (425)
T 1r5m_A 310 ---------------------GSVRLWSLKQNTLLALSIVDGV----PIFAGRISQDGQKYAVAFMDGQVNVYDLKK 361 (425)
T ss_dssp ---------------------SEEEEEETTTTEEEEEEECTTC----CEEEEEECTTSSEEEEEETTSCEEEEECHH
T ss_pred ---------------------CcEEEEECCCCcEeEecccCCc----cEEEEEEcCCCCEEEEEECCCeEEEEECCC
Confidence 4688888757787777766443 34455544 344444333467788877654
No 152
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=98.82 E-value=4e-06 Score=75.96 Aligned_cols=248 Identities=11% Similarity=0.021 Sum_probs=148.6
Q ss_pred CCCCceEEEeeCCCeEEEEecCCEEEEEEcCCCeeEEeeccCCCcccCeEECCCCCEEEEeCCC------cEEEEc-C-C
Q 018474 51 VNHPEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGGVILCDNEK------GLLKVT-E-E 122 (355)
Q Consensus 51 ~~~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~~~~~~~p~~gl~~d~~g~L~v~~~~~------gl~~~~-~-~ 122 (355)
-....++++.+++..+++++.+|.|..+|..+++..........+. .+++.++|+.+++.... .+..++ . .
T Consensus 74 ~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~ 152 (369)
T 3zwl_B 74 TGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWKSPVPVK-RVEFSPCGNYFLAILDNVMKNPGSINIYEIERD 152 (369)
T ss_dssp SSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSCEE-EEEECTTSSEEEEEECCBTTBCCEEEEEEEEEC
T ss_pred CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCeE-EEEEccCCCEEEEecCCccCCCCEEEEEEecCC
Confidence 3456788898767778888899999999998886654444455677 89999999866654333 354554 2 2
Q ss_pred C----eEEEcCCc----------CCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCC-CeEEE-ee
Q 018474 123 G----VEAIVPDA----------SFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKL-KETTV-LH 186 (355)
Q Consensus 123 g----~~~~~~~~----------~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~-~~~~~-~~ 186 (355)
. ........ ..+..++++++|+..++... .+.+..||..+ ++... +.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-----------------dg~i~i~d~~~~~~~~~~~~ 215 (369)
T 3zwl_B 153 SATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHK-----------------DGKISKYDVSNNYEYVDSID 215 (369)
T ss_dssp TTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEET-----------------TSEEEEEETTTTTEEEEEEE
T ss_pred ccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcC-----------------CCEEEEEECCCCcEeEEEEe
Confidence 1 11111111 26778889998876555322 56789999876 44332 22
Q ss_pred ccccccccEEEeCCCCEEEEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCCEEEEeecCCchhhHhhhc
Q 018474 187 EGFYFANGIALSKNEDFVVVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQK 266 (355)
Q Consensus 187 ~~~~~pngi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~ 266 (355)
........++++|+++.++.+. ..+.|..|+++... ....+. .......+.++++|++.+..............
T Consensus 216 ~~~~~v~~~~~~~~~~~l~~~~-~d~~i~v~d~~~~~--~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~- 289 (369)
T 3zwl_B 216 LHEKSISDMQFSPDLTYFITSS-RDTNSFLVDVSTLQ--VLKKYE--TDCPLNTAVITPLKEFIILGGGQEAKDVTTTS- 289 (369)
T ss_dssp CCSSCEEEEEECTTSSEEEEEE-TTSEEEEEETTTCC--EEEEEE--CSSCEEEEEECSSSSEEEEEECCC---------
T ss_pred cCCCceeEEEECCCCCEEEEec-CCceEEEEECCCCc--eeeeec--CCCCceeEEecCCCceEEEeecCCCceEEEEe-
Confidence 2234457899999999666554 56789999985432 122221 22234567788888765555442211100000
Q ss_pred chhHHHHHHhccchhhcccCCCCCCceEEEEEeCCCCeEEEEEECCCCCcccceeEEEEe-CCEEEEeecCCCeEEEeeC
Q 018474 267 CREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF-DGNLYLASLQSNFIGILPL 345 (355)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-~g~L~v~~~~~~~i~~~~~ 345 (355)
.......+..+|...++.+..+..+.+ .++.+... +++++++....+.|..+++
T Consensus 290 ---------------------~~~~~~~i~~~d~~~~~~~~~~~~~~~----~v~~~~~s~~~~~l~s~~~dg~v~iw~~ 344 (369)
T 3zwl_B 290 ---------------------ANEGKFEARFYHKIFEEEIGRVQGHFG----PLNTVAISPQGTSYASGGEDGFIRLHHF 344 (369)
T ss_dssp --------------------------CEEEEEETTTCCEEEEEECCSS----CEEEEEECTTSSEEEEEETTSEEEEEEE
T ss_pred ---------------------cCCCcceeEEEecCCCcchhheecccC----cEEEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 001112467778767788888876554 45556654 3555555545778888776
Q ss_pred CC
Q 018474 346 DG 347 (355)
Q Consensus 346 ~~ 347 (355)
..
T Consensus 345 ~~ 346 (369)
T 3zwl_B 345 EK 346 (369)
T ss_dssp CH
T ss_pred cc
Confidence 54
No 153
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=98.82 E-value=1.7e-05 Score=70.63 Aligned_cols=154 Identities=12% Similarity=0.097 Sum_probs=103.9
Q ss_pred CCCCCCceEEEeeCCCeEEEEecCCEEEEEEcCCCeeEEeec-cCCCcccCeEECCCCCEEEEeCCCc-EEEEc-CCC--
Q 018474 49 GCVNHPEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKH-IDSQSLLGLTTTKDGGVILCDNEKG-LLKVT-EEG-- 123 (355)
Q Consensus 49 ~~~~~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~~~-~~~~p~~gl~~d~~g~L~v~~~~~g-l~~~~-~~g-- 123 (355)
+.-....++++.+++..++++..+|.|..+|..+++...... ...... .+.+.++++++++...++ +..++ .++
T Consensus 63 ~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~ 141 (312)
T 4ery_A 63 GHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVF-CCNFNPQSNLIVSGSFDESVRIWDVKTGKC 141 (312)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE-EEEECSSSSEEEEEETTSCEEEEETTTCCE
T ss_pred cCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEE-EEEEcCCCCEEEEEeCCCcEEEEECCCCEE
Confidence 333456788999777778888899999999998776543322 234466 788999988766544444 55666 455
Q ss_pred eEEEcCCcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEE-eecc-ccccccEEEeCCC
Q 018474 124 VEAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTV-LHEG-FYFANGIALSKNE 201 (355)
Q Consensus 124 ~~~~~~~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~-~~~~-~~~pngi~~~~dg 201 (355)
...+......+..++++++|.+.++.+. .+.+..||..+++... +... ......++++|++
T Consensus 142 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----------------d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (312)
T 4ery_A 142 LKTLPAHSDPVSAVHFNRDGSLIVSSSY-----------------DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG 204 (312)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEET-----------------TSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTS
T ss_pred EEEecCCCCcEEEEEEcCCCCEEEEEeC-----------------CCcEEEEECCCCceeeEEeccCCCceEEEEECCCC
Confidence 5555444456888999999977665433 4578888887765432 2221 2233568999999
Q ss_pred CEEEEEeCCCCeEEEEEeCC
Q 018474 202 DFVVVCESWKFRCRRYWLKG 221 (355)
Q Consensus 202 ~~l~v~~~~~~~i~~~~~~~ 221 (355)
+.++.+ ...+.|..|++..
T Consensus 205 ~~l~~~-~~d~~i~iwd~~~ 223 (312)
T 4ery_A 205 KYILAA-TLDNTLKLWDYSK 223 (312)
T ss_dssp SEEEEE-ETTTEEEEEETTT
T ss_pred CEEEEE-cCCCeEEEEECCC
Confidence 966555 4567899999754
No 154
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=98.82 E-value=1.6e-06 Score=80.40 Aligned_cols=241 Identities=9% Similarity=0.066 Sum_probs=149.4
Q ss_pred CCCceEEEeeCCCeEEEEecCCEEEEEEcCC----C-eeEEeeccCCCcccCeEECCC-CCEEEEeCCCc-EEEEcC-CC
Q 018474 52 NHPEDVSVVVSKGALYTATRDGWVKYFILHN----E-TLVNWKHIDSQSLLGLTTTKD-GGVILCDNEKG-LLKVTE-EG 123 (355)
Q Consensus 52 ~~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~----g-~~~~~~~~~~~p~~gl~~d~~-g~L~v~~~~~g-l~~~~~-~g 123 (355)
....++++.+++..|+++..+|.|..++..+ . ....+......+. .+++.++ ++++++...++ +..++. ++
T Consensus 68 ~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~~l~s~~~dg~v~iwd~~~~ 146 (416)
T 2pm9_A 68 SKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVK-TVKFNAKQDNVLASGGNNGEIFIWDMNKC 146 (416)
T ss_dssp SCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCC-EEEECSSSTTBEEEECSSSCEEBCBTTTT
T ss_pred CceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceE-EEEEcCCCCCEEEEEcCCCeEEEEECCCC
Confidence 4466888987777788888999999999865 2 2333322334566 8999887 66655544445 445552 22
Q ss_pred e------EEEc-----CCcCCcccEEEccC-CcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeecc---
Q 018474 124 V------EAIV-----PDASFTNDVIAASD-GTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEG--- 188 (355)
Q Consensus 124 ~------~~~~-----~~~~~~~~l~~d~d-G~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~--- 188 (355)
. ..+. .....+.+++++++ +.++++... .+.+..||..+++.......
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-----------------dg~v~iwd~~~~~~~~~~~~~~~ 209 (416)
T 2pm9_A 147 TESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGS-----------------SNFASIWDLKAKKEVIHLSYTSP 209 (416)
T ss_dssp SSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESS-----------------SSCEEEEETTTTEEEEEECCCCC
T ss_pred ccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcC-----------------CCCEEEEECCCCCcceEEecccc
Confidence 1 2211 11257888999998 577766433 56788899877765433322
Q ss_pred ----ccccccEEEeCCCCEEEEEeCCCC---eEEEEEeCCCCCcceeEecccCCCCcCceEECC-CCCEEEEeecCCchh
Q 018474 189 ----FYFANGIALSKNEDFVVVCESWKF---RCRRYWLKGDRAGILDAFIENLPGGPDNINLAP-DGSFWIGLIKMNQTG 260 (355)
Q Consensus 189 ----~~~pngi~~~~dg~~l~v~~~~~~---~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~-~G~lwv~~~~~~~~~ 260 (355)
......++++|++..++++....+ .|..|+++.... ....+..........+.+++ +|++.++....
T Consensus 210 ~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~-~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d---- 284 (416)
T 2pm9_A 210 NSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANT-PLQTLNQGHQKGILSLDWCHQDEHLLLSSGRD---- 284 (416)
T ss_dssp SSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTS-CSBCCCSCCSSCEEEEEECSSCSSCEEEEESS----
T ss_pred ccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCC-CcEEeecCccCceeEEEeCCCCCCeEEEEeCC----
Confidence 234578999999854555555555 888999864311 11111101223345677877 77766655431
Q ss_pred hHhhhcchhHHHHHHhccchhhcccCCCCCCceEEEEEeCCCCeEEEEEECCCCCcccceeEEEEeC-C-EEEEeecCCC
Q 018474 261 VRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFD-G-NLYLASLQSN 338 (355)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~-g-~L~v~~~~~~ 338 (355)
+.|..+|.++++.+..+..+.+ .+..+.... + ++++.....+
T Consensus 285 --------------------------------g~v~~wd~~~~~~~~~~~~~~~----~v~~~~~s~~~~~~l~s~~~d~ 328 (416)
T 2pm9_A 285 --------------------------------NTVLLWNPESAEQLSQFPARGN----WCFKTKFAPEAPDLFACASFDN 328 (416)
T ss_dssp --------------------------------SEEEEECSSSCCEEEEEECSSS----CCCCEEECTTCTTEEEECCSSS
T ss_pred --------------------------------CCEEEeeCCCCccceeecCCCC----ceEEEEECCCCCCEEEEEecCC
Confidence 4577888767888888876554 344455543 4 5666666688
Q ss_pred eEEEeeCCCCCCC
Q 018474 339 FIGILPLDGPEPQ 351 (355)
Q Consensus 339 ~i~~~~~~~~~~~ 351 (355)
.|..+++......
T Consensus 329 ~i~iw~~~~~~~~ 341 (416)
T 2pm9_A 329 KIEVQTLQNLTNT 341 (416)
T ss_dssp EEEEEESCCCCCS
T ss_pred cEEEEEccCCCCC
Confidence 8999998776543
No 155
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.81 E-value=1e-06 Score=81.18 Aligned_cols=76 Identities=12% Similarity=0.176 Sum_probs=54.7
Q ss_pred CCeEEEEeCCCCeEEEeeccccccccEEEeCCCCEEEEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCC
Q 018474 169 YGQLRKYDPKLKETTVLHEGFYFANGIALSKNEDFVVVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGS 248 (355)
Q Consensus 169 ~g~l~~~dp~~~~~~~~~~~~~~pngi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~ 248 (355)
.+.++.||.++++......... |.+++++|||+.+|+++. +.|..||.+..++.....+. .....|.+++++++|+
T Consensus 285 ~~~v~viD~~t~~~v~~i~~~~-p~~ia~spdg~~l~v~n~--~~v~v~D~~t~~l~~~~~i~-~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 285 AAEIWVMDTKTKQRVARIPGRD-ALSMTIDQQRNLMLTLDG--GNVNVYDISQPEPKLLRTIE-GAAEASLQVQFHPVGG 360 (361)
T ss_dssp CSEEEEEETTTTEEEEEEECTT-CCEEEEETTTTEEEEECS--SCEEEEECSSSSCEEEEEET-TSCSSEEEEEECCCSC
T ss_pred CceEEEEECCCCcEEEEEecCC-eeEEEECCCCCEEEEeCC--CeEEEEECCCCcceeeEEec-cCCCCcEEEEecCCCC
Confidence 3579999999887654443344 999999999999999874 89999997543222222221 3344689999999985
No 156
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.81 E-value=9.4e-07 Score=88.88 Aligned_cols=138 Identities=10% Similarity=-0.008 Sum_probs=93.2
Q ss_pred CCCceEEEeeCCCeEEEEec-CC-----EEEEEEcCCCeeEEeeccC-C------------------------CcccCeE
Q 018474 52 NHPEDVSVVVSKGALYTATR-DG-----WVKYFILHNETLVNWKHID-S------------------------QSLLGLT 100 (355)
Q Consensus 52 ~~p~~i~~d~~~g~l~~~~~-~g-----~i~~~~~~~g~~~~~~~~~-~------------------------~p~~gl~ 100 (355)
..+.++++.+++..|+.+.. ++ .|+.+|..+++........ . .+. .++
T Consensus 37 ~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~ 115 (741)
T 2ecf_A 37 PTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIV-DYQ 115 (741)
T ss_dssp CCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESC-CCE
T ss_pred CCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcc-eeE
Confidence 56788999977777888776 77 8999999888766554321 1 146 889
Q ss_pred ECCCCCEEEEeCCCcEEEEcC-CC----eEEEcCCcCCcccEEEccCCc-EEEEeCCCCCCCccccccccccCCCCeEEE
Q 018474 101 TTKDGGVILCDNEKGLLKVTE-EG----VEAIVPDASFTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRK 174 (355)
Q Consensus 101 ~d~~g~L~v~~~~~gl~~~~~-~g----~~~~~~~~~~~~~l~~d~dG~-ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~ 174 (355)
+.+||+..+....+.++.++. ++ .+.+......+.+++++|||+ |.++. .+.|+.
T Consensus 116 ~SpDg~~l~~~~~~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-------------------~~~i~~ 176 (741)
T 2ecf_A 116 WSPDAQRLLFPLGGELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-------------------GRNLWV 176 (741)
T ss_dssp ECTTSSEEEEEETTEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-------------------TTEEEE
T ss_pred ECCCCCEEEEEeCCcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-------------------CCcEEE
Confidence 999998544433456777773 22 222222225678899999996 54442 236899
Q ss_pred EeCCCCeEEEeeccccc-----------------cccEEEeCCCCEEEEEeC
Q 018474 175 YDPKLKETTVLHEGFYF-----------------ANGIALSKNEDFVVVCES 209 (355)
Q Consensus 175 ~dp~~~~~~~~~~~~~~-----------------pngi~~~~dg~~l~v~~~ 209 (355)
+|.++++...+...... +.+++++|||+.|+++..
T Consensus 177 ~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~ 228 (741)
T 2ecf_A 177 IDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARI 228 (741)
T ss_dssp EETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEE
T ss_pred EecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEE
Confidence 99888876655432211 467999999998888753
No 157
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.81 E-value=7e-06 Score=76.24 Aligned_cols=238 Identities=8% Similarity=0.004 Sum_probs=145.5
Q ss_pred CCCceEEEeeCCCeEEEEecCCEEEEEEcCCCeeEEee-ccCCCcccCeEECCCCCEEEEeCCCcEEEEc-C-CC--eEE
Q 018474 52 NHPEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWK-HIDSQSLLGLTTTKDGGVILCDNEKGLLKVT-E-EG--VEA 126 (355)
Q Consensus 52 ~~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~~-~~~~~p~~gl~~d~~g~L~v~~~~~gl~~~~-~-~g--~~~ 126 (355)
....++++.+++..|++++.+|.|..++..+++..... .....+. .+.+++ ..|+.+...+.+..++ . .+ ...
T Consensus 135 ~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~-~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~ 212 (401)
T 4aez_A 135 TYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVG-CLSWNR-HVLSSGSRSGAIHHHDVRIANHQIGT 212 (401)
T ss_dssp CCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEE-EEEEET-TEEEEEETTSEEEEEETTSSSCEEEE
T ss_pred CCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceE-EEEECC-CEEEEEcCCCCEEEEecccCcceeeE
Confidence 34568889876777888889999999998777644332 2234456 777742 3445555444455666 3 23 444
Q ss_pred EcCCcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEee-ccccccccEEEeCCCCEEE
Q 018474 127 IVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH-EGFYFANGIALSKNEDFVV 205 (355)
Q Consensus 127 ~~~~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~-~~~~~pngi~~~~dg~~l~ 205 (355)
+......+.+++++++|++.++.+. .+.+..||..+++..... ........++++|++..++
T Consensus 213 ~~~~~~~v~~~~~~~~~~~l~s~~~-----------------d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll 275 (401)
T 4aez_A 213 LQGHSSEVCGLAWRSDGLQLASGGN-----------------DNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLL 275 (401)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEET-----------------TSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEE
T ss_pred EcCCCCCeeEEEEcCCCCEEEEEeC-----------------CCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEE
Confidence 4444467889999999977665433 457888998776544332 3334467899999887777
Q ss_pred EEeC--CCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCCEEEEeecCCchhhHhhhcchhHHHHHHhccchhhc
Q 018474 206 VCES--WKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISL 283 (355)
Q Consensus 206 v~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (355)
++.. ..+.|..|++.... ....+ ........+.++++|++.+++.+
T Consensus 276 ~~~~gs~d~~i~i~d~~~~~--~~~~~--~~~~~v~~~~~s~~~~~l~~~~g---------------------------- 323 (401)
T 4aez_A 276 ATGGGTMDKQIHFWNAATGA--RVNTV--DAGSQVTSLIWSPHSKEIMSTHG---------------------------- 323 (401)
T ss_dssp EEECCTTTCEEEEEETTTCC--EEEEE--ECSSCEEEEEECSSSSEEEEEEC----------------------------
T ss_pred EEecCCCCCEEEEEECCCCC--EEEEE--eCCCcEEEEEECCCCCeEEEEee----------------------------
Confidence 7754 57889999985432 12222 12233566788999988777643
Q ss_pred ccCCCCCCceEEEEEeCCCCeEEEE--EECCCCCcccceeEEEEe-CCEEEEeecCCCeEEEeeCCCCCC
Q 018474 284 LLPMGSDAGARVVKVDGNDGKIIRD--FNDPDATYISFVTSAAEF-DGNLYLASLQSNFIGILPLDGPEP 350 (355)
Q Consensus 284 ~~~~~~~~~~~v~~~~~~~g~~~~~--~~~~~g~~~~~~~~~~~~-~g~L~v~~~~~~~i~~~~~~~~~~ 350 (355)
...+.|..++..+++.... +..+.+ .+..+... ++++.+.......|..+++.+...
T Consensus 324 ------~~dg~i~v~~~~~~~~~~~~~~~~h~~----~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~ 383 (401)
T 4aez_A 324 ------FPDNNLSIWSYSSSGLTKQVDIPAHDT----RVLYSALSPDGRILSTAASDENLKFWRVYDGDH 383 (401)
T ss_dssp ------TTTCEEEEEEEETTEEEEEEEEECCSS----CCCEEEECTTSSEEEEECTTSEEEEEECCC---
T ss_pred ------cCCCcEEEEecCCccceeEEEecCCCC----CEEEEEECCCCCEEEEEeCCCcEEEEECCCCcc
Confidence 1124566666534444443 334333 34455554 344444444477888888766543
No 158
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=98.80 E-value=1.2e-05 Score=72.69 Aligned_cols=190 Identities=11% Similarity=0.109 Sum_probs=116.1
Q ss_pred CCCCCCceEEEeeCCCeEEEEecCCEEEEEEcCCCeeEEeec-cCCCcccCeEECCCCCEEEEeCCCc-EEEEc-CCC--
Q 018474 49 GCVNHPEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKH-IDSQSLLGLTTTKDGGVILCDNEKG-LLKVT-EEG-- 123 (355)
Q Consensus 49 ~~~~~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~~~-~~~~p~~gl~~d~~g~L~v~~~~~g-l~~~~-~~g-- 123 (355)
+.-..-.++++.+++..|++++.+|.|..++..+++...... ....+. ++++.++++++++...+| +..++ .++
T Consensus 30 ~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 108 (369)
T 3zwl_B 30 GHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIW-SIDVDCFTKYCVTGSADYSIKLWDVSNGQC 108 (369)
T ss_dssp CCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEE-EEEECTTSSEEEEEETTTEEEEEETTTCCE
T ss_pred EeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEE-EEEEcCCCCEEEEEeCCCeEEEEECCCCcE
Confidence 445667889999777778888889999999987776544332 334567 899999888666544445 55666 455
Q ss_pred eEEEcCCcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCe----E--------EEee--ccc
Q 018474 124 VEAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKE----T--------TVLH--EGF 189 (355)
Q Consensus 124 ~~~~~~~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~----~--------~~~~--~~~ 189 (355)
...+. ....+..+.++++|...++.... .....+.+..||..+++ + ..+. ...
T Consensus 109 ~~~~~-~~~~v~~~~~~~~~~~l~~~~~~------------~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (369)
T 3zwl_B 109 VATWK-SPVPVKRVEFSPCGNYFLAILDN------------VMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGL 175 (369)
T ss_dssp EEEEE-CSSCEEEEEECTTSSEEEEEECC------------BTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTC
T ss_pred EEEee-cCCCeEEEEEccCCCEEEEecCC------------ccCCCCEEEEEEecCCccceeecccccceeeeccCCcCc
Confidence 44443 33678889999999766553320 00112455555543221 1 1111 111
Q ss_pred cccccEEEeCCCCEEEEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCCEEEEeec
Q 018474 190 YFANGIALSKNEDFVVVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIK 255 (355)
Q Consensus 190 ~~pngi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~ 255 (355)
.....++++++++.++.+. ..+.|..|++.... .....+. ...+....+.++++|++.++...
T Consensus 176 ~~~~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~-~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~ 238 (369)
T 3zwl_B 176 DAATVAGWSTKGKYIIAGH-KDGKISKYDVSNNY-EYVDSID-LHEKSISDMQFSPDLTYFITSSR 238 (369)
T ss_dssp CCEEEEEECGGGCEEEEEE-TTSEEEEEETTTTT-EEEEEEE-CCSSCEEEEEECTTSSEEEEEET
T ss_pred cceeEEEEcCCCCEEEEEc-CCCEEEEEECCCCc-EeEEEEe-cCCCceeEEEECCCCCEEEEecC
Confidence 1456788999999666654 56789999985421 1122221 22333566788899986665543
No 159
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=98.80 E-value=5.3e-07 Score=85.76 Aligned_cols=164 Identities=14% Similarity=0.198 Sum_probs=100.9
Q ss_pred eEecCCCCCCCceEEEeeCCC-eEEEEecCCEEEEEEcCCCe-eEEee-------cc-----CCCcccCeEECCC----C
Q 018474 44 TKLGEGCVNHPEDVSVVVSKG-ALYTATRDGWVKYFILHNET-LVNWK-------HI-----DSQSLLGLTTTKD----G 105 (355)
Q Consensus 44 ~~~~~~~~~~p~~i~~d~~~g-~l~~~~~~g~i~~~~~~~g~-~~~~~-------~~-----~~~p~~gl~~d~~----g 105 (355)
+.+..+ +..|.+|++.+++. ++|++...|+|+++++.... ...+. .. .+... +|+++++ +
T Consensus 7 ~~va~g-L~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gll-gia~~P~f~~n~ 84 (463)
T 2wg3_C 7 QEVVSG-LRQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLL-SLAFHPNYKKNG 84 (463)
T ss_dssp EEEEEE-ESSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEE-EEEECTTHHHHC
T ss_pred EEeccC-CCCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcce-eeEeCCCCcCCC
Confidence 455554 78999999995542 69999999999999763221 11111 11 13356 8999875 8
Q ss_pred CEEEEeCC-------------CcEEEEc-CC--------C-eEEEcC---C--cCCcccEEEccCCcEEEEeCCCCCCCc
Q 018474 106 GVILCDNE-------------KGLLKVT-EE--------G-VEAIVP---D--ASFTNDVIAASDGTLYFTVASTKYTPT 157 (355)
Q Consensus 106 ~L~v~~~~-------------~gl~~~~-~~--------g-~~~~~~---~--~~~~~~l~~d~dG~ly~~d~~~~~~~~ 157 (355)
.|||+-.. ..|.++. .. . .+++.. . ..+...|++++||.||++.........
T Consensus 85 ~lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~~~~~ 164 (463)
T 2wg3_C 85 KLYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGMITLD 164 (463)
T ss_dssp EEEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTTCCHH
T ss_pred EEEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCCCCCC
Confidence 89997431 1455554 11 1 122211 1 145667999999999998754211000
Q ss_pred cccccccccCCCCeEEEEeCCCC--------------------eEEEeeccccccccEEEeCC-----CC-EEEEEeC
Q 018474 158 DFYKDMAEGKPYGQLRKYDPKLK--------------------ETTVLHEGFYFANGIALSKN-----ED-FVVVCES 209 (355)
Q Consensus 158 ~~~~~~~~~~~~g~l~~~dp~~~--------------------~~~~~~~~~~~pngi~~~~d-----g~-~l~v~~~ 209 (355)
.....--.....|.|+|+|+++. ..+.++.++.+|.|++++++ |+ ++|.+|.
T Consensus 165 ~~~~~q~~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RNp~gla~dp~tg~~~G~l~~~~~D~ 242 (463)
T 2wg3_C 165 DMEEMDGLSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHDPGRCAVDRHPTDININLTILCSDS 242 (463)
T ss_dssp HHHHCTTCCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCSSCCBEEEESSCSSTTCSEEEEEECC
T ss_pred ccccccCcCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCCCcceEEECCCCCCcccceEEEeccc
Confidence 00000001234689999999863 23567788999999999997 34 5677775
No 160
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=98.79 E-value=3.6e-05 Score=69.75 Aligned_cols=185 Identities=11% Similarity=0.109 Sum_probs=117.0
Q ss_pred CCCCCCCceEEEeeCCCeEEEEecCCEEEEEEcCCCeeEEe-eccCCCcccCeEECCCCCEEEEeCCCcEE-EEc-CC--
Q 018474 48 EGCVNHPEDVSVVVSKGALYTATRDGWVKYFILHNETLVNW-KHIDSQSLLGLTTTKDGGVILCDNEKGLL-KVT-EE-- 122 (355)
Q Consensus 48 ~~~~~~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~-~~~~~~p~~gl~~d~~g~L~v~~~~~gl~-~~~-~~-- 122 (355)
.+....-.++++.+++..|..++.+|.|..+|..+++.... ........ .+++.++|++.++...++.+ .++ .+
T Consensus 52 ~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~-~~~~s~~~~~l~s~~~d~~v~iw~~~~~~ 130 (340)
T 1got_B 52 RGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVM-TCAYAPSGNYVACGGLDNICSIYNLKTRE 130 (340)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEE-EEEECTTSSEEEEEETTCEEEEEETTTCS
T ss_pred cCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEE-EEEECCCCCEEEEEeCCCeEEEEECccCC
Confidence 45556677889987777788889999999999877754433 22234466 88899999876655455544 444 22
Q ss_pred C-eE---EEcCCcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeecc-ccccccEEE
Q 018474 123 G-VE---AIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEG-FYFANGIAL 197 (355)
Q Consensus 123 g-~~---~~~~~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~-~~~pngi~~ 197 (355)
+ .+ .+......+..+.+.+++.+..+.. .+.+..||..+++......+ ......+++
T Consensus 131 ~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~------------------d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~ 192 (340)
T 1got_B 131 GNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG------------------DTTCALWDIETGQQTTTFTGHTGDVMSLSL 192 (340)
T ss_dssp BSCEEEEEEECCSSCEEEEEEEETTEEEEEET------------------TSCEEEEETTTTEEEEEECCCSSCEEEEEE
T ss_pred CcceeEEEecCCCccEEEEEECCCCcEEEEEC------------------CCcEEEEECCCCcEEEEEcCCCCceEEEEE
Confidence 2 22 2333335667777777777554422 45688889887765433322 234567899
Q ss_pred eCCCCEEEEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCCEEEEeec
Q 018474 198 SKNEDFVVVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIK 255 (355)
Q Consensus 198 ~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~ 255 (355)
+|+++ ++++....+.|..|++.... ....+. ........+.+.++|+++++...
T Consensus 193 ~~~~~-~l~sg~~d~~v~~wd~~~~~--~~~~~~-~h~~~v~~v~~~p~~~~l~s~s~ 246 (340)
T 1got_B 193 APDTR-LFVSGACDASAKLWDVREGM--CRQTFT-GHESDINAICFFPNGNAFATGSD 246 (340)
T ss_dssp CTTSS-EEEEEETTSCEEEEETTTCS--EEEEEC-CCSSCEEEEEECTTSSEEEEEET
T ss_pred CCCCC-EEEEEeCCCcEEEEECCCCe--eEEEEc-CCcCCEEEEEEcCCCCEEEEEcC
Confidence 99998 45555567889999875432 122222 22333456788999987776654
No 161
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.78 E-value=8.6e-06 Score=75.37 Aligned_cols=137 Identities=4% Similarity=-0.133 Sum_probs=92.5
Q ss_pred CCCeEEEEec--CC---EEEEEEcCCCeeEEeeccCCCcccCeEECCCCC-EEEEeC----------CCcEEEEcC-CC-
Q 018474 62 SKGALYTATR--DG---WVKYFILHNETLVNWKHIDSQSLLGLTTTKDGG-VILCDN----------EKGLLKVTE-EG- 123 (355)
Q Consensus 62 ~~g~l~~~~~--~g---~i~~~~~~~g~~~~~~~~~~~p~~gl~~d~~g~-L~v~~~----------~~gl~~~~~-~g- 123 (355)
++..+|+... .+ .|..+|+.+++...-...+..| ++++++||+ |||++. .+.+..+|. +.
T Consensus 31 ~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~ 108 (373)
T 2mad_H 31 DGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFL 108 (373)
T ss_pred CCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCc
Confidence 4567887764 22 7899999888866444444444 899999986 899863 233678884 44
Q ss_pred -eEEEcCC-------cCCcccEEEccCC-cEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeecccccccc
Q 018474 124 -VEAIVPD-------ASFTNDVIAASDG-TLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYFANG 194 (355)
Q Consensus 124 -~~~~~~~-------~~~~~~l~~d~dG-~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~~~~png 194 (355)
+..+... ...|.+++++||| .||+++.. ..+.+..+| ++++.... -+..|.+
T Consensus 109 ~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~----------------~~~~v~viD-~t~~~~~~--~i~~~~~ 169 (373)
T 2mad_H 109 PIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFA----------------AGPAVGLVV-QGGSSDDQ--LLSSPTC 169 (373)
T ss_pred EEEEEECCCccccccCCCccceEECCCCCEEEEEecC----------------CCCeEEEEE-CCCCEEeE--EcCCCce
Confidence 3433322 1468899999999 69988642 134688899 88876432 0233445
Q ss_pred EEEeCCCCEEEEEeCCCCeEEEEEe
Q 018474 195 IALSKNEDFVVVCESWKFRCRRYWL 219 (355)
Q Consensus 195 i~~~~dg~~l~v~~~~~~~i~~~~~ 219 (355)
+.+.++++..|++....+.+..++.
T Consensus 170 ~~~~~~~~~~~~~~~~dg~~~~vd~ 194 (373)
T 2mad_H 170 YHIHPGAPSTFYLLCAQGGLAKTDH 194 (373)
T ss_pred EEEEeCCCceEEEEcCCCCEEEEEC
Confidence 6677888778888777778888876
No 162
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.78 E-value=1e-06 Score=88.62 Aligned_cols=195 Identities=13% Similarity=0.088 Sum_probs=114.6
Q ss_pred CceEEEeeCCCeEEEEecCCEEEEEEcCCC---eeEEeeccCCCcccCeEECCCCCEEEEeCCCcEEEEcC-CC-eEEEc
Q 018474 54 PEDVSVVVSKGALYTATRDGWVKYFILHNE---TLVNWKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVTE-EG-VEAIV 128 (355)
Q Consensus 54 p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g---~~~~~~~~~~~p~~gl~~d~~g~L~v~~~~~gl~~~~~-~g-~~~~~ 128 (355)
..++++.|++..|+++.. +.|+.++..++ +...+......+. .+++.+||+..+....+.|+.++. ++ ...+.
T Consensus 111 v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~-~~~~SPDG~~la~~~~~~i~~~d~~~g~~~~~~ 188 (741)
T 2ecf_A 111 IVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFAT-DAKLSPKGGFVSFIRGRNLWVIDLASGRQMQLT 188 (741)
T ss_dssp SCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEE-EEEECTTSSEEEEEETTEEEEEETTTTEEEECC
T ss_pred cceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccc-cccCCCCCCEEEEEeCCcEEEEecCCCCEEEec
Confidence 468899976676777665 88999999877 6655544445567 889999998444433457888884 56 54443
Q ss_pred CCcC-----------------CcccEEEccCCc-EEEEeCCC-CCCC-------------ccccccccccC--CCCeEEE
Q 018474 129 PDAS-----------------FTNDVIAASDGT-LYFTVAST-KYTP-------------TDFYKDMAEGK--PYGQLRK 174 (355)
Q Consensus 129 ~~~~-----------------~~~~l~~d~dG~-ly~~d~~~-~~~~-------------~~~~~~~~~~~--~~g~l~~ 174 (355)
.... .+.+++++|||+ |+++.... .... ....+. ..+. ....++.
T Consensus 189 ~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~-~~g~~~~~~~l~~ 267 (741)
T 2ecf_A 189 ADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYP-AAGDANVQVKLGV 267 (741)
T ss_dssp CCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECC-BTTSCCCEEEEEE
T ss_pred cCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecC-CCCCCCCeeEEEE
Confidence 2211 157899999994 66653210 0000 000000 0011 1226888
Q ss_pred EeCCC-CeEEEeec---cccccccEEEeCCCCEEEEEeC----CCCeEEEEEeCCCCCcceeEecccCCC---CcCceEE
Q 018474 175 YDPKL-KETTVLHE---GFYFANGIALSKNEDFVVVCES----WKFRCRRYWLKGDRAGILDAFIENLPG---GPDNINL 243 (355)
Q Consensus 175 ~dp~~-~~~~~~~~---~~~~pngi~~~~dg~~l~v~~~----~~~~i~~~~~~~~~~~~~~~~~~~~~g---~p~~i~~ 243 (355)
+|.++ ++...+.. .......+++ |||+.++++.. ....|+.+++++... ...+.....+ ....+.+
T Consensus 268 ~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~--~~~~~~~~~~~~~~~~~~~~ 344 (741)
T 2ecf_A 268 ISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQ--RVLAHETSPTWVPLHNSLRF 344 (741)
T ss_dssp ECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCE--EEEEEEECSSCCCCCSCCEE
T ss_pred EECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCce--EEEEEcCCCCcCCcCCceEE
Confidence 99888 76654432 1234567899 99998887653 234688888754322 1112111111 1246788
Q ss_pred CCCCCEEEEee
Q 018474 244 APDGSFWIGLI 254 (355)
Q Consensus 244 d~~G~lwv~~~ 254 (355)
++||++++...
T Consensus 345 spdg~~~~~~~ 355 (741)
T 2ecf_A 345 LDDGSILWSSE 355 (741)
T ss_dssp CTTSCEEEEEC
T ss_pred CCCCeEEEEec
Confidence 99998655543
No 163
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=98.77 E-value=6.9e-06 Score=76.76 Aligned_cols=232 Identities=14% Similarity=0.133 Sum_probs=144.0
Q ss_pred CCCceEEEeeCCCeEEEEecCCEEEEEEcCCCeeEEeec-cCCCcccCeEECCCCCEEEEeCCCc-EEEEc-CCC--eEE
Q 018474 52 NHPEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKH-IDSQSLLGLTTTKDGGVILCDNEKG-LLKVT-EEG--VEA 126 (355)
Q Consensus 52 ~~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~~~-~~~~p~~gl~~d~~g~L~v~~~~~g-l~~~~-~~g--~~~ 126 (355)
..-.++++.+++..|.+++.++.|..+|..+++...... ....+. ++++.++|+.+++...++ +..++ .++ ++.
T Consensus 151 ~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~-~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~ 229 (410)
T 1vyh_C 151 DSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVS-SVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKT 229 (410)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEE-EEEECSSSSEEEEEETTSEEEEEETTTCCEEEE
T ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEE-EEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEE
Confidence 445678888667778888899999999987765443222 223466 889999988666554555 44555 456 555
Q ss_pred EcCCcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEee-ccccccccEEEeCC-----
Q 018474 127 IVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH-EGFYFANGIALSKN----- 200 (355)
Q Consensus 127 ~~~~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~-~~~~~pngi~~~~d----- 200 (355)
+......++.+.++++|.+.++.+. .+.+..||..+++..... ......+.++++|+
T Consensus 230 ~~~h~~~v~~~~~~~~g~~l~s~s~-----------------D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 292 (410)
T 1vyh_C 230 FTGHREWVRMVRPNQDGTLIASCSN-----------------DQTVRVWVVATKECKAELREHRHVVECISWAPESSYSS 292 (410)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEET-----------------TSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGG
T ss_pred EeCCCccEEEEEECCCCCEEEEEcC-----------------CCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccc
Confidence 5554467888999999987776443 456777887766543322 22233456777775
Q ss_pred ---------------CCEEEEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCCEEEEeecCCchhhHhhh
Q 018474 201 ---------------EDFVVVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQ 265 (355)
Q Consensus 201 ---------------g~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~ 265 (355)
+. ++++....+.|..|++.... ....+. ........+.++++|++.++....
T Consensus 293 ~~~~~~~~~~~~~~~g~-~l~sgs~D~~i~iwd~~~~~--~~~~~~-~h~~~v~~v~~~~~g~~l~s~s~D--------- 359 (410)
T 1vyh_C 293 ISEATGSETKKSGKPGP-FLLSGSRDKTIKMWDVSTGM--CLMTLV-GHDNWVRGVLFHSGGKFILSCADD--------- 359 (410)
T ss_dssp GGGCCSCC-------CC-EEEEEETTSEEEEEETTTTE--EEEEEE-CCSSCEEEEEECSSSSCEEEEETT---------
T ss_pred hhhhccccccccCCCCC-EEEEEeCCCeEEEEECCCCc--eEEEEE-CCCCcEEEEEEcCCCCEEEEEeCC---------
Confidence 44 45555667889999975321 122222 233334567889999876665432
Q ss_pred cchhHHHHHHhccchhhcccCCCCCCceEEEEEeCCCCeEEEEEECCCCCcccceeEEEEeC-CEEEEeecCCCeEEEee
Q 018474 266 KCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFD-GNLYLASLQSNFIGILP 344 (355)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~-g~L~v~~~~~~~i~~~~ 344 (355)
+.|..+|.++++....+..+.+ .++.+.... +.+.++......|...+
T Consensus 360 ---------------------------~~i~vwd~~~~~~~~~~~~h~~----~v~~l~~~~~~~~l~sgs~D~~i~vW~ 408 (410)
T 1vyh_C 360 ---------------------------KTLRVWDYKNKRCMKTLNAHEH----FVTSLDFHKTAPYVVTGSVDQTVKVWE 408 (410)
T ss_dssp ---------------------------TEEEEECCTTSCCCEEEECCSS----CEEEEEECSSSSCEEEEETTSEEEEEC
T ss_pred ---------------------------CeEEEEECCCCceEEEEcCCCC----cEEEEEEcCCCCEEEEEeCCCcEEEEe
Confidence 3566777656666667765443 466666654 44444444456666654
Q ss_pred C
Q 018474 345 L 345 (355)
Q Consensus 345 ~ 345 (355)
+
T Consensus 409 ~ 409 (410)
T 1vyh_C 409 C 409 (410)
T ss_dssp -
T ss_pred C
Confidence 3
No 164
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.75 E-value=1.9e-05 Score=76.97 Aligned_cols=235 Identities=12% Similarity=0.109 Sum_probs=147.0
Q ss_pred CceEEEee--CCCeEEEEecCCEEEEEEcCCC--------eeE-EeeccCCCcccCeEECCCCCEEEEeCCC----cEEE
Q 018474 54 PEDVSVVV--SKGALYTATRDGWVKYFILHNE--------TLV-NWKHIDSQSLLGLTTTKDGGVILCDNEK----GLLK 118 (355)
Q Consensus 54 p~~i~~d~--~~g~l~~~~~~g~i~~~~~~~g--------~~~-~~~~~~~~p~~gl~~d~~g~L~v~~~~~----gl~~ 118 (355)
..++++.+ ++..|+++..+|.|..++..++ +.. .+......+. .+++.++|+.+++.... +.+.
T Consensus 67 v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~s~~~~~l~~~~~~~~~~~~v~ 145 (615)
T 1pgu_A 67 VTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPIS-DISWDFEGRRLCVVGEGRDNFGVFI 145 (615)
T ss_dssp EEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEE-EEEECTTSSEEEEEECCSSCSEEEE
T ss_pred EEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEE-EEEEeCCCCEEEEeccCCCCccEEE
Confidence 67899997 7777888889999999988544 222 2222234566 89999999865544332 3333
Q ss_pred EcCCC--eEEEcCCcCCcccEEEccCCc-EEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeeccc-c---c
Q 018474 119 VTEEG--VEAIVPDASFTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGF-Y---F 191 (355)
Q Consensus 119 ~~~~g--~~~~~~~~~~~~~l~~d~dG~-ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~~-~---~ 191 (355)
+-..+ ...+......+..++++++|. +.++.+. .+.+..||..+++........ . .
T Consensus 146 ~~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-----------------d~~v~vwd~~~~~~~~~~~~~~~~~~~ 208 (615)
T 1pgu_A 146 SWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGD-----------------DGSVVFYQGPPFKFSASDRTHHKQGSF 208 (615)
T ss_dssp ETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEEET-----------------TTEEEEEETTTBEEEEEECSSSCTTCC
T ss_pred EEECCCcceeeecCCccEEEEEECCCCCcEEEEEeC-----------------CCcEEEEeCCCcceeeeecccCCCCce
Confidence 33333 555544446788999999986 5555332 567888998777654433322 2 3
Q ss_pred cccEEEeCC-CCEEEEEeCCCCeEEEEEeCCCCCcceeEecc---cCCCCcCceEECCCCCEEEEeecCCchhhHhhhcc
Q 018474 192 ANGIALSKN-EDFVVVCESWKFRCRRYWLKGDRAGILDAFIE---NLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKC 267 (355)
Q Consensus 192 pngi~~~~d-g~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~---~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~ 267 (355)
...++++|+ ++.++.+. ..+.|..|++...+ ....+.. ...+....+.+. +|++.++....
T Consensus 209 v~~~~~~~~~~~~l~~~~-~dg~i~vwd~~~~~--~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d----------- 273 (615)
T 1pgu_A 209 VRDVEFSPDSGEFVITVG-SDRKISCFDGKSGE--FLKYIEDDQEPVQGGIFALSWL-DSQKFATVGAD----------- 273 (615)
T ss_dssp EEEEEECSTTCCEEEEEE-TTCCEEEEETTTCC--EEEECCBTTBCCCSCEEEEEES-SSSEEEEEETT-----------
T ss_pred EEEEEECCCCCCEEEEEe-CCCeEEEEECCCCC--EeEEecccccccCCceEEEEEc-CCCEEEEEcCC-----------
Confidence 567899999 88665554 56789999975432 1222211 222334557787 88776666441
Q ss_pred hhHHHHHHhccchhhcccCCCCCCceEEEEEeCCCCeEEEEEECCCCCcccceeEEEE-eCCEEEEeecCCCeEEEeeCC
Q 018474 268 REKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAE-FDGNLYLASLQSNFIGILPLD 346 (355)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~ 346 (355)
+.|..+|..+++....+..+.......+..+.. .++.+..++. .+.|..+++.
T Consensus 274 -------------------------~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~g~i~~~d~~ 327 (615)
T 1pgu_A 274 -------------------------ATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSL-DGTLNFYELG 327 (615)
T ss_dssp -------------------------SEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEET-TSCEEEEETT
T ss_pred -------------------------CcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEEC-CCCEEEEECC
Confidence 457788875688888887653332334444443 4566666665 6777777765
Q ss_pred C
Q 018474 347 G 347 (355)
Q Consensus 347 ~ 347 (355)
.
T Consensus 328 ~ 328 (615)
T 1pgu_A 328 H 328 (615)
T ss_dssp E
T ss_pred C
Confidence 4
No 165
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=98.75 E-value=9.8e-06 Score=82.08 Aligned_cols=238 Identities=8% Similarity=0.035 Sum_probs=146.2
Q ss_pred CCCCCCceEEEeeCCCeEEEEecCCEEEEEEcCCCeeEE-eeccCCCcccCeEECCCCCEEEEeCCCc-EEEEc-CCC--
Q 018474 49 GCVNHPEDVSVVVSKGALYTATRDGWVKYFILHNETLVN-WKHIDSQSLLGLTTTKDGGVILCDNEKG-LLKVT-EEG-- 123 (355)
Q Consensus 49 ~~~~~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~-~~~~~~~p~~gl~~d~~g~L~v~~~~~g-l~~~~-~~g-- 123 (355)
+.-....++++.|++..+.++..+|.|..++..+++... +......+. ++++.++|+.+++....| +..++ .++
T Consensus 11 ~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~-~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~ 89 (814)
T 3mkq_A 11 NRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVR-AGKFIARKNWIIVGSDDFRIRVFNYNTGEK 89 (814)
T ss_dssp EECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEE-EEEEEGGGTEEEEEETTSEEEEEETTTCCE
T ss_pred cCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEE-EEEEeCCCCEEEEEeCCCeEEEEECCCCcE
Confidence 334567899999877888888899999999987876543 332344566 899999988555443444 55556 455
Q ss_pred eEEEcCCcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCC-eEEEe-eccccccccEEEeC-C
Q 018474 124 VEAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLK-ETTVL-HEGFYFANGIALSK-N 200 (355)
Q Consensus 124 ~~~~~~~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~-~~~~~-~~~~~~pngi~~~~-d 200 (355)
+..+......+.+++++++|...++.+. .+.+..||..++ ..... .........++++| +
T Consensus 90 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~-----------------dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~ 152 (814)
T 3mkq_A 90 VVDFEAHPDYIRSIAVHPTKPYVLSGSD-----------------DLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKD 152 (814)
T ss_dssp EEEEECCSSCEEEEEECSSSSEEEEEET-----------------TSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTE
T ss_pred EEEEecCCCCEEEEEEeCCCCEEEEEcC-----------------CCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCC
Confidence 5555444467889999999975554322 457788887655 33222 22233456789999 6
Q ss_pred CCEEEEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECC--CCCEEEEeecCCchhhHhhhcchhHHHHHHhcc
Q 018474 201 EDFVVVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAP--DGSFWIGLIKMNQTGVRAIQKCREKWELLDAYP 278 (355)
Q Consensus 201 g~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~--~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (355)
++. +++....+.|..|++..... ...+..........+.+.+ +|++.++....
T Consensus 153 ~~~-l~~~~~dg~v~vwd~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d---------------------- 207 (814)
T 3mkq_A 153 PST-FASGCLDRTVKVWSLGQSTP--NFTLTTGQERGVNYVDYYPLPDKPYMITASDD---------------------- 207 (814)
T ss_dssp EEE-EEEEETTSEEEEEETTCSSC--SEEEECCCTTCCCEEEECCSTTCCEEEEECTT----------------------
T ss_pred CCE-EEEEeCCCeEEEEECCCCcc--eeEEecCCCCCEEEEEEEECCCCCEEEEEeCC----------------------
Confidence 664 44445668899999854322 1112212212245566666 77766655431
Q ss_pred chhhcccCCCCCCceEEEEEeCCCCeEEEEEECCCCCcccceeEEEEeC-CEEEEeecCCCeEEEeeCCC
Q 018474 279 GLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFD-GNLYLASLQSNFIGILPLDG 347 (355)
Q Consensus 279 ~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~-g~L~v~~~~~~~i~~~~~~~ 347 (355)
+.|..+|..+++....+..+.+ .++.+.... +.+.+.....+.|..+++.+
T Consensus 208 --------------g~i~~~d~~~~~~~~~~~~~~~----~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~ 259 (814)
T 3mkq_A 208 --------------LTIKIWDYQTKSCVATLEGHMS----NVSFAVFHPTLPIIISGSEDGTLKIWNSST 259 (814)
T ss_dssp --------------SEEEEEETTTTEEEEEEECCSS----CEEEEEECSSSSEEEEEETTSCEEEEETTT
T ss_pred --------------CEEEEEECCCCcEEEEEcCCCC----CEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 4577778657777777765443 344455432 33333333356677776654
No 166
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=98.75 E-value=1.9e-06 Score=79.39 Aligned_cols=186 Identities=13% Similarity=0.058 Sum_probs=118.2
Q ss_pred CceEEEeeCCCeEEEEe--cCCEEEEEEcCCCeeEEeeccCCCcccCeEECCCCCEEEEeCCCcEEEEc-CCC--eEEEc
Q 018474 54 PEDVSVVVSKGALYTAT--RDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVT-EEG--VEAIV 128 (355)
Q Consensus 54 p~~i~~d~~~g~l~~~~--~~g~i~~~~~~~g~~~~~~~~~~~p~~gl~~d~~g~L~v~~~~~gl~~~~-~~g--~~~~~ 128 (355)
..++++.|++..+.+++ .++.|..+|.++++..........+. ++++.++|+++++...+++.+++ .++ .....
T Consensus 136 ~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~~V~-~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~ 214 (365)
T 4h5i_A 136 TKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIETRGEVK-DLHFSTDGKVVAYITGSSLEVISTVTGSCIARKT 214 (365)
T ss_dssp EEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEECSSCCC-EEEECTTSSEEEEECSSCEEEEETTTCCEEEEEC
T ss_pred EEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCCCceE-EEEEccCCceEEeccceeEEEEEeccCcceeeee
Confidence 44688997677777765 47889999998887654444445678 99999999988877677788887 455 32222
Q ss_pred C--CcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEe-----eccccccccEEEeCCC
Q 018474 129 P--DASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVL-----HEGFYFANGIALSKNE 201 (355)
Q Consensus 129 ~--~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~-----~~~~~~pngi~~~~dg 201 (355)
. ....++.+++.++|+..++.+.. +.....+..++......... .......+.++++|||
T Consensus 215 ~~~~~~~v~~v~fspdg~~l~~~s~d-------------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg 281 (365)
T 4h5i_A 215 DFDKNWSLSKINFIADDTVLIAASLK-------------KGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKG 281 (365)
T ss_dssp CCCTTEEEEEEEEEETTEEEEEEEES-------------SSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTS
T ss_pred cCCCCCCEEEEEEcCCCCEEEEEecC-------------CcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCC
Confidence 2 22567889999999766653320 01112355566544433221 1222334678999999
Q ss_pred CEEEEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCCEEEEeecC
Q 018474 202 DFVVVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIKM 256 (355)
Q Consensus 202 ~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~ 256 (355)
+.|.. ....+.|..|+++..+ ....+.....+....+++++||++.++....
T Consensus 282 ~~las-gs~D~~V~iwd~~~~~--~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D 333 (365)
T 4h5i_A 282 ELAVL-ASNDNSIALVKLKDLS--MSKIFKQAHSFAITEVTISPDSTYVASVSAA 333 (365)
T ss_dssp CEEEE-EETTSCEEEEETTTTE--EEEEETTSSSSCEEEEEECTTSCEEEEEETT
T ss_pred CceEE-EcCCCEEEEEECCCCc--EEEEecCcccCCEEEEEECCCCCEEEEEeCC
Confidence 95544 4556789899875321 2222333333445678899999988877653
No 167
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=98.73 E-value=3e-06 Score=77.99 Aligned_cols=188 Identities=8% Similarity=0.004 Sum_probs=121.2
Q ss_pred CCCCCCceEEEeeCC-CeEEEEecCCEEEEEEcCCCeeEEeec---cCCCcccCeEECC-CCCEEEEeCCCc-EEEEcC-
Q 018474 49 GCVNHPEDVSVVVSK-GALYTATRDGWVKYFILHNETLVNWKH---IDSQSLLGLTTTK-DGGVILCDNEKG-LLKVTE- 121 (355)
Q Consensus 49 ~~~~~p~~i~~d~~~-g~l~~~~~~g~i~~~~~~~g~~~~~~~---~~~~p~~gl~~d~-~g~L~v~~~~~g-l~~~~~- 121 (355)
+.-..-.++++.+++ ..+++++.+|.|..++..+++...... ....+. ++++.+ +++++++...++ +..++.
T Consensus 71 ~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~~l~s~~~d~~i~iwd~~ 149 (383)
T 3ei3_B 71 PFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAIT-GMKFNQFNTNQLFVSSIRGATTLRDFS 149 (383)
T ss_dssp CCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEE-EEEEETTEEEEEEEEETTTEEEEEETT
T ss_pred CCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCcee-EEEeCCCCCCEEEEEeCCCEEEEEECC
Confidence 434567789999665 678888999999999997776554432 234566 888987 555554443444 555553
Q ss_pred CC-eEEEcCCc---CCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeeccccccccEEE
Q 018474 122 EG-VEAIVPDA---SFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYFANGIAL 197 (355)
Q Consensus 122 ~g-~~~~~~~~---~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~~~~pngi~~ 197 (355)
++ ...+.... ..+.+++++++|++.++... .+.+..||.+......+.........+++
T Consensus 150 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----------------d~~i~i~d~~~~~~~~~~~h~~~v~~~~~ 212 (383)
T 3ei3_B 150 GSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDS-----------------TGRLLLLGLDGHEIFKEKLHKAKVTHAEF 212 (383)
T ss_dssp SCEEEEEECCCCSSCCEEEEEEETTTTEEEEEET-----------------TSEEEEEETTSCEEEEEECSSSCEEEEEE
T ss_pred CCceEEEeccCCCCCCeEEEEECCCCCEEEEECC-----------------CCCEEEEECCCCEEEEeccCCCcEEEEEE
Confidence 34 55443322 56888999999976665433 56788899865555555444455678999
Q ss_pred eCCCCEEEEEeCCCCeEEEEEeCCCCC-cceeEecccCCCCcCceEECC-CCCEEEEeec
Q 018474 198 SKNEDFVVVCESWKFRCRRYWLKGDRA-GILDAFIENLPGGPDNINLAP-DGSFWIGLIK 255 (355)
Q Consensus 198 ~~dg~~l~v~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~g~p~~i~~d~-~G~lwv~~~~ 255 (355)
+|+++.++++....+.|..|++..... ....... ...+....+.+++ +|++.++...
T Consensus 213 ~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~ 271 (383)
T 3ei3_B 213 NPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQ 271 (383)
T ss_dssp CSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEES
T ss_pred CCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcC
Confidence 999984455555678899999864221 2221111 2333456678888 8987666544
No 168
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=98.72 E-value=1.4e-06 Score=79.95 Aligned_cols=236 Identities=14% Similarity=0.116 Sum_probs=136.9
Q ss_pred CceEEEeeCCCeEEEEecCCEEEEEEcCCCeeEEe---ec--cCCCcccCeEECCCCCEEEEeCCCc-EEEEc-CCC--e
Q 018474 54 PEDVSVVVSKGALYTATRDGWVKYFILHNETLVNW---KH--IDSQSLLGLTTTKDGGVILCDNEKG-LLKVT-EEG--V 124 (355)
Q Consensus 54 p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~---~~--~~~~p~~gl~~d~~g~L~v~~~~~g-l~~~~-~~g--~ 124 (355)
-.++++. +++.++++..+|.|..+|..+++.... .. ....+. ++++.++|+.+++....+ +..++ .++ +
T Consensus 97 V~~~~~s-~d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~-~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~ 174 (357)
T 4g56_B 97 VTDVAWV-SEKGILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVK-TLSVFSDGTQAVSGGKDFSVKVWDLSQKAVL 174 (357)
T ss_dssp EEEEEEE-TTTEEEEEETTSCEEEC--------CCCCEEECCCSSCEE-EEEECSSSSEEEEEETTSCEEEEETTTTEEE
T ss_pred EEEEEEc-CCCCEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEE-EEEECCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence 4678888 567888888899999988876653221 11 123466 899999998766544445 55556 455 4
Q ss_pred EEEcCCcCCcccEEEccCC-cEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeec---cccccccEEEeCC
Q 018474 125 EAIVPDASFTNDVIAASDG-TLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHE---GFYFANGIALSKN 200 (355)
Q Consensus 125 ~~~~~~~~~~~~l~~d~dG-~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~---~~~~pngi~~~~d 200 (355)
..+......++++++.+++ .++++... .+.+..||..+++...... ....+..++++|+
T Consensus 175 ~~~~~h~~~v~~v~~s~~~~~~~~s~~~-----------------dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~ 237 (357)
T 4g56_B 175 KSYNAHSSEVNCVAACPGKDTIFLSCGE-----------------DGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPE 237 (357)
T ss_dssp EEECCCSSCEEEEEECTTCSSCEEEEET-----------------TSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTT
T ss_pred EEEcCCCCCEEEEEEccCCCceeeeecc-----------------CCceEEEECCCCceeeeeeeccccccccchhhhhc
Confidence 5554444678889998877 45555332 4567788876665322211 1233567899998
Q ss_pred CCEEEEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCC-EEEEeecCCchhhHhhhcchhHHHHHHhccc
Q 018474 201 EDFVVVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGS-FWIGLIKMNQTGVRAIQKCREKWELLDAYPG 279 (355)
Q Consensus 201 g~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~-lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (355)
+..++++....+.|..|++...+ ....+. ........+++.++|. +.++....
T Consensus 238 ~~~~la~g~~d~~i~~wd~~~~~--~~~~~~-~~~~~v~~l~~sp~~~~~lasgs~D----------------------- 291 (357)
T 4g56_B 238 KDDTFACGDETGNVSLVNIKNPD--SAQTSA-VHSQNITGLAYSYHSSPFLASISED----------------------- 291 (357)
T ss_dssp STTEEEEEESSSCEEEEESSCGG--GCEEEC-CCSSCEEEEEECSSSSCCEEEEETT-----------------------
T ss_pred ccceEEEeecccceeEEECCCCc--EeEEEe-ccceeEEEEEEcCCCCCEEEEEeCC-----------------------
Confidence 76566666667889999985432 122222 2222234577888774 44433321
Q ss_pred hhhcccCCCCCCceEEEEEeCCCCeEEEEEECCCCCcccceeEEEEe--CCEEEEeecCCCeEEEeeCCCCCCCc
Q 018474 280 LISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF--DGNLYLASLQSNFIGILPLDGPEPQL 352 (355)
Q Consensus 280 ~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~--~g~L~v~~~~~~~i~~~~~~~~~~~~ 352 (355)
+.|..+|.+.++.+..+ .+. ..++.+... +++++++.-....|...++++...+.
T Consensus 292 -------------~~i~iwd~~~~~~~~~~-~H~----~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~~~~ 348 (357)
T 4g56_B 292 -------------CTVAVLDADFSEVFRDL-SHR----DFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEGRTE 348 (357)
T ss_dssp -------------SCEEEECTTSCEEEEEC-CCS----SCEEEEEECSSSTTEEEEEETTSCEEEEECC------
T ss_pred -------------CEEEEEECCCCcEeEEC-CCC----CCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCccc
Confidence 34777787567665544 323 356777764 45555555557889999987765544
No 169
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=98.71 E-value=5.7e-06 Score=76.04 Aligned_cols=248 Identities=10% Similarity=0.028 Sum_probs=143.8
Q ss_pred CCCCceEEEee-CCCeEEEEecCCEEEEEEcCCCeeEEeeccC---CCcccCeEECCCCCEEEEeCCCc-EEEEcCCC--
Q 018474 51 VNHPEDVSVVV-SKGALYTATRDGWVKYFILHNETLVNWKHID---SQSLLGLTTTKDGGVILCDNEKG-LLKVTEEG-- 123 (355)
Q Consensus 51 ~~~p~~i~~d~-~~g~l~~~~~~g~i~~~~~~~g~~~~~~~~~---~~p~~gl~~d~~g~L~v~~~~~g-l~~~~~~g-- 123 (355)
-....++++.+ ++..+++++.++.|..+|..++....+.... ..+. ++++.++++++++...++ +..++.++
T Consensus 118 ~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 196 (383)
T 3ei3_B 118 GDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVIQVFAKTDSWDYWYC-CVDVSVSRQMLATGDSTGRLLLLGLDGHE 196 (383)
T ss_dssp TCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCEEEEEECCCCSSCCEE-EEEEETTTTEEEEEETTSEEEEEETTSCE
T ss_pred CCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCceEEEeccCCCCCCeE-EEEECCCCCEEEEECCCCCEEEEECCCCE
Confidence 34556888885 3466777888999999999766555544322 3466 888988888655544444 55555444
Q ss_pred eEEEcCCcCCcccEEEccCCc-EEEEeCCCCCCCccccccccccCCCCeEEEEeCCC----CeEEEeeccccccccEEEe
Q 018474 124 VEAIVPDASFTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKL----KETTVLHEGFYFANGIALS 198 (355)
Q Consensus 124 ~~~~~~~~~~~~~l~~d~dG~-ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~----~~~~~~~~~~~~pngi~~~ 198 (355)
+..+......+.++++++++. ++++.+. .+.+..||..+ ++.............++++
T Consensus 197 ~~~~~~h~~~v~~~~~~~~~~~~l~s~~~-----------------d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s 259 (383)
T 3ei3_B 197 IFKEKLHKAKVTHAEFNPRCDWLMATSSV-----------------DATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFN 259 (383)
T ss_dssp EEEEECSSSCEEEEEECSSCTTEEEEEET-----------------TSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEEC
T ss_pred EEEeccCCCcEEEEEECCCCCCEEEEEeC-----------------CCEEEEEeCCCCCcccceEEEecCCCceEEEEEc
Confidence 555554446789999999997 6666433 45677887765 3333222333446789999
Q ss_pred C-CCCEEEEEeCCCCeEEEEEeCCCCC-cceeEecccCC--CCcCceEECCCCCEEEEeecCCchhhHhhhcchhHHHHH
Q 018474 199 K-NEDFVVVCESWKFRCRRYWLKGDRA-GILDAFIENLP--GGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELL 274 (355)
Q Consensus 199 ~-dg~~l~v~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~--g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~ 274 (355)
| +++.++.+. ..+.|..|+++.... ........... ..+-.....+++.+...........
T Consensus 260 ~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~-------------- 324 (383)
T 3ei3_B 260 PTDSTKLLTTD-QRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL-------------- 324 (383)
T ss_dssp TTTSCEEEEEE-SSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--------------
T ss_pred CCCCCEEEEEc-CCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc--------------
Confidence 9 998666554 568999999864322 11111000000 0111234455555444333211100
Q ss_pred HhccchhhcccCCCCCCceEEEEEeCCCCeEEEEEECCCCCcccceeEEEEe-CCEEEEeecCCCeEEEeeCCC
Q 018474 275 DAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF-DGNLYLASLQSNFIGILPLDG 347 (355)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-~g~L~v~~~~~~~i~~~~~~~ 347 (355)
.++..+.|..+|.++++.+..+..+.. ...+..+... ++++.++.. .+.|..+++++
T Consensus 325 -------------s~s~d~~i~iwd~~~~~~~~~l~~~~~--~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 325 -------------LLNDKRTIDIYDANSGGLVHQLRDPNA--AGIISLNKFSPTGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp -------------CTTCCCCEEEEETTTCCEEEEECBTTB--CSCCCEEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred -------------ccCCCCeEEEEecCCCceeeeecCCCC--CceEEEEEEecCccEEEEec-CCcEEEEecCC
Confidence 012335688888767888888865321 1234443443 344444443 67888888764
No 170
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=98.70 E-value=3.3e-06 Score=76.03 Aligned_cols=182 Identities=11% Similarity=0.052 Sum_probs=111.4
Q ss_pred CCCCceEEEeeCCCeEEEEecCCEEEEEEcCCCe----eEEeeccCCCcccCeEECCCCC--EEEEeCCCcEEEEcC-CC
Q 018474 51 VNHPEDVSVVVSKGALYTATRDGWVKYFILHNET----LVNWKHIDSQSLLGLTTTKDGG--VILCDNEKGLLKVTE-EG 123 (355)
Q Consensus 51 ~~~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~----~~~~~~~~~~p~~gl~~d~~g~--L~v~~~~~gl~~~~~-~g 123 (355)
-....++++.+++..|++++.+|.|..++..+++ ..........+. .+++.++++ |+.+...+.+..++. ..
T Consensus 11 ~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~l~~~~~dg~i~~wd~~~~ 89 (342)
T 1yfq_A 11 KDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLL-CCNFIDNTDLQIYVGTVQGEILKVDLIGS 89 (342)
T ss_dssp SSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEE-EEEEEESSSEEEEEEETTSCEEEECSSSS
T ss_pred CCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceE-EEEECCCCCcEEEEEcCCCeEEEEEeccC
Confidence 3456788899777788889999999999886665 333333344567 889988888 455554445666664 43
Q ss_pred --eEEEcC--CcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCC---------CeEEEeecccc
Q 018474 124 --VEAIVP--DASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKL---------KETTVLHEGFY 190 (355)
Q Consensus 124 --~~~~~~--~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~---------~~~~~~~~~~~ 190 (355)
...+.. ....+.++++++ +.+.++.+. .+.+..||..+ ++.........
T Consensus 90 ~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~-----------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 151 (342)
T 1yfq_A 90 PSFQALTNNEANLGICRICKYG-DDKLIAASW-----------------DGLIEVIDPRNYGDGVIAVKNLNSNNTKVKN 151 (342)
T ss_dssp SSEEECBSCCCCSCEEEEEEET-TTEEEEEET-----------------TSEEEEECHHHHTTBCEEEEESCSSSSSSCC
T ss_pred CceEeccccCCCCceEEEEeCC-CCEEEEEcC-----------------CCeEEEEcccccccccccccCCeeeEEeeCC
Confidence 555544 446788899988 766655332 45677777543 22111111223
Q ss_pred ccccEEEeCCCCEEEEEeCCCCeEEEEEeCC-CCCcceeEecccCCCCcCceEECC-CCCEEEEeec
Q 018474 191 FANGIALSKNEDFVVVCESWKFRCRRYWLKG-DRAGILDAFIENLPGGPDNINLAP-DGSFWIGLIK 255 (355)
Q Consensus 191 ~pngi~~~~dg~~l~v~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~g~p~~i~~d~-~G~lwv~~~~ 255 (355)
....+++++++ ++++ ...+.|..|+++. ..... .............+.+.+ +|+++++...
T Consensus 152 ~v~~~~~~~~~--l~~~-~~d~~i~i~d~~~~~~~~~-~~~~~~~~~~i~~i~~~~~~~~~l~~~~~ 214 (342)
T 1yfq_A 152 KIFTMDTNSSR--LIVG-MNNSQVQWFRLPLCEDDNG-TIEESGLKYQIRDVALLPKEQEGYACSSI 214 (342)
T ss_dssp CEEEEEECSSE--EEEE-ESTTEEEEEESSCCTTCCC-EEEECSCSSCEEEEEECSGGGCEEEEEET
T ss_pred ceEEEEecCCc--EEEE-eCCCeEEEEECCccccccc-eeeecCCCCceeEEEECCCCCCEEEEEec
Confidence 35678888876 4444 4567899999865 32211 111112233356677888 8876665544
No 171
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=98.70 E-value=3.5e-05 Score=69.19 Aligned_cols=187 Identities=16% Similarity=0.163 Sum_probs=112.8
Q ss_pred CCCCCCCceEEEeeCC-CeEEEEecCCEEEEEEcCCC--e----eEEeeccCCCcccCeEECCCCCEEEEeCCCcEEE-E
Q 018474 48 EGCVNHPEDVSVVVSK-GALYTATRDGWVKYFILHNE--T----LVNWKHIDSQSLLGLTTTKDGGVILCDNEKGLLK-V 119 (355)
Q Consensus 48 ~~~~~~p~~i~~d~~~-g~l~~~~~~g~i~~~~~~~g--~----~~~~~~~~~~p~~gl~~d~~g~L~v~~~~~gl~~-~ 119 (355)
.|.-..-.++++.+.+ ..|..++.|+.|..++..+. + ...+........ .+++.++|++.++...++.++ +
T Consensus 14 ~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~-~~~~s~dg~~l~s~s~D~~v~~w 92 (319)
T 3frx_A 14 EGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQ-DCTLTADGAYALSASWDKTLRLW 92 (319)
T ss_dssp CCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEE-EEEECTTSSEEEEEETTSEEEEE
T ss_pred ccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEE-EEEECCCCCEEEEEeCCCEEEEE
Confidence 3544556778887544 56778889999988876322 1 112222223456 788999998776655556454 4
Q ss_pred c-CCC--eEEEcCCcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeeccccccccEE
Q 018474 120 T-EEG--VEAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYFANGIA 196 (355)
Q Consensus 120 ~-~~g--~~~~~~~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~~~~pngi~ 196 (355)
+ .++ ++.+......+.++++++++.+.++.+. .+.+..||.++.....+.........++
T Consensus 93 d~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~-----------------D~~i~vwd~~~~~~~~~~~h~~~v~~~~ 155 (319)
T 3frx_A 93 DVATGETYQRFVGHKSDVMSVDIDKKASMIISGSR-----------------DKTIKVWTIKGQCLATLLGHNDWVSQVR 155 (319)
T ss_dssp ETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEET-----------------TSCEEEEETTSCEEEEECCCSSCEEEEE
T ss_pred ECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeC-----------------CCeEEEEECCCCeEEEEeccCCcEEEEE
Confidence 5 466 5555544467889999999987776443 4567778876655544433323344566
Q ss_pred EeCCCC-----EEEEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCCEEEEeec
Q 018474 197 LSKNED-----FVVVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIK 255 (355)
Q Consensus 197 ~~~dg~-----~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~ 255 (355)
+.|.++ ..+++....+.|..++++... ....+. ........+.++++|++.++...
T Consensus 156 ~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~--~~~~~~-~h~~~v~~~~~sp~g~~l~s~~~ 216 (319)
T 3frx_A 156 VVPNEKADDDSVTIISAGNDKMVKAWNLNQFQ--IEADFI-GHNSNINTLTASPDGTLIASAGK 216 (319)
T ss_dssp ECCC------CCEEEEEETTSCEEEEETTTTE--EEEEEC-CCCSCEEEEEECTTSSEEEEEET
T ss_pred EccCCCCCCCccEEEEEeCCCEEEEEECCcch--hheeec-CCCCcEEEEEEcCCCCEEEEEeC
Confidence 766432 145555567788888875321 111222 22233455778999987776644
No 172
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=98.69 E-value=3.8e-06 Score=78.06 Aligned_cols=236 Identities=11% Similarity=0.009 Sum_probs=139.4
Q ss_pred CCceEEEeeCCCeEEEEecCCEEEEEEcCCCeeEEeeccCCCcccCeEECCCCCEEEEeCCCc-EEEEc-CCC-eEE-Ec
Q 018474 53 HPEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGGVILCDNEKG-LLKVT-EEG-VEA-IV 128 (355)
Q Consensus 53 ~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~~~~~~~p~~gl~~d~~g~L~v~~~~~g-l~~~~-~~g-~~~-~~ 128 (355)
...++++++++..++++..+|.|+.++..+++............ ...+.++|+++++....| +..++ .++ ... +.
T Consensus 58 ~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 136 (420)
T 3vl1_A 58 AGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRADYTA-VDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQ 136 (420)
T ss_dssp CCTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSCCEEE-EEEECSSSCEEEEEETTSCEEEECTTSCEEEEETT
T ss_pred cccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecCCceE-EEEEecCCCEEEEEECCCCEEEEeCCCcceeeecc
Confidence 35588999888889999999999999986655432222111122 335667887655444444 65666 355 333 33
Q ss_pred CCcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeE-EEeeccccccccEEEeCCCCEEEEE
Q 018474 129 PDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKET-TVLHEGFYFANGIALSKNEDFVVVC 207 (355)
Q Consensus 129 ~~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~-~~~~~~~~~pngi~~~~dg~~l~v~ 207 (355)
.....+.+++++++|++.++.+. .+.+..||..+++. ..+.........++++||++.++.+
T Consensus 137 ~h~~~v~~~~~~~~~~~l~s~s~-----------------d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 199 (420)
T 3vl1_A 137 AHVSEITKLKFFPSGEALISSSQ-----------------DMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSA 199 (420)
T ss_dssp SSSSCEEEEEECTTSSEEEEEET-----------------TSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEE
T ss_pred cccCccEEEEECCCCCEEEEEeC-----------------CCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEE
Confidence 34477899999999976665433 56788898876643 3333233445789999999966554
Q ss_pred eCCCCeEEEEEeCCCCCcceeEeccc-----------------------CCCCcCceEECCCCCEEEEeecCCchhhHhh
Q 018474 208 ESWKFRCRRYWLKGDRAGILDAFIEN-----------------------LPGGPDNINLAPDGSFWIGLIKMNQTGVRAI 264 (355)
Q Consensus 208 ~~~~~~i~~~~~~~~~~~~~~~~~~~-----------------------~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~ 264 (355)
...+.|..|+++..+ ....+... .......+.++++|++.++....
T Consensus 200 -~~d~~v~iwd~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-------- 268 (420)
T 3vl1_A 200 -SLDGTIRLWECGTGT--TIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVS-------- 268 (420)
T ss_dssp -ETTSCEEEEETTTTE--EEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETT--------
T ss_pred -cCCCcEEEeECCCCc--eeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCC--------
Confidence 456788889875421 11111100 00112335567778655544331
Q ss_pred hcchhHHHHHHhccchhhcccCCCCCCceEEEEEeCCCCeEEEEEECCCCCcccceeEEEEeC-CE-EEEeecCCCeEEE
Q 018474 265 QKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFD-GN-LYLASLQSNFIGI 342 (355)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~-g~-L~v~~~~~~~i~~ 342 (355)
+.|..+|..+++....+.... ...++.+.... +. +.+.......|..
T Consensus 269 ----------------------------g~i~i~d~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~l~~g~~dg~i~v 317 (420)
T 3vl1_A 269 ----------------------------GVITVHNVFSKEQTIQLPSKF---TCSCNSLTVDGNNANYIYAGYENGMLAQ 317 (420)
T ss_dssp ----------------------------SCEEEEETTTCCEEEEECCTT---SSCEEEEEECSSCTTEEEEEETTSEEEE
T ss_pred ----------------------------CeEEEEECCCCceeEEccccc---CCCceeEEEeCCCCCEEEEEeCCCeEEE
Confidence 347777765666555553321 22455566543 33 4444444778888
Q ss_pred eeCCCC
Q 018474 343 LPLDGP 348 (355)
Q Consensus 343 ~~~~~~ 348 (355)
++++..
T Consensus 318 wd~~~~ 323 (420)
T 3vl1_A 318 WDLRSP 323 (420)
T ss_dssp EETTCT
T ss_pred EEcCCC
Confidence 888764
No 173
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.68 E-value=2e-06 Score=79.41 Aligned_cols=244 Identities=8% Similarity=-0.092 Sum_probs=139.8
Q ss_pred CCeEEEEecC-C----EEEEEEcCCCeeEEeeccCCCcccCeEECCCC-CEEEEeC----------CCcEEEEcC-CC--
Q 018474 63 KGALYTATRD-G----WVKYFILHNETLVNWKHIDSQSLLGLTTTKDG-GVILCDN----------EKGLLKVTE-EG-- 123 (355)
Q Consensus 63 ~g~l~~~~~~-g----~i~~~~~~~g~~~~~~~~~~~p~~gl~~d~~g-~L~v~~~----------~~gl~~~~~-~g-- 123 (355)
...+|+.... + .|..+|..+++...-...+..| +++++++| .+||++. .+-+..+|. ++
T Consensus 31 ~~~~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~v 108 (368)
T 1mda_H 31 SRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLP 108 (368)
T ss_dssp TTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCE
T ss_pred CCeEEEECCccCCccceEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCE
Confidence 3467777653 3 7889999998876555556666 79999988 5999973 123778884 55
Q ss_pred eEEEcCC-------cCCcccEEEccCC-cEEEEeCCC-C------CCCccccccc----------------cccCCCCeE
Q 018474 124 VEAIVPD-------ASFTNDVIAASDG-TLYFTVAST-K------YTPTDFYKDM----------------AEGKPYGQL 172 (355)
Q Consensus 124 ~~~~~~~-------~~~~~~l~~d~dG-~ly~~d~~~-~------~~~~~~~~~~----------------~~~~~~g~l 172 (355)
+..+... ...|..+++++|| .+|+++... . ..... ...+ ......+.+
T Consensus 109 v~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t-v~~i~v~~~~~~~p~g~~~~~~~~~dg~~ 187 (368)
T 1mda_H 109 IADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD-DQLTKSASCFHIHPGAAATHYLGSCPASL 187 (368)
T ss_dssp EEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE-EEEEECSSCCCCEEEETTEEECCCCTTSC
T ss_pred EEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh-ceEEECCCceEEccCCCeEEEEEcCCCCE
Confidence 4544321 1479999999999 799987431 1 11111 0000 011123344
Q ss_pred EEEeCCC-----CeEEE----eeccccccccEEEeCCCCEEEEEeCCCCeEEEEEeCCCCCcceeEe--cc----cCCCC
Q 018474 173 RKYDPKL-----KETTV----LHEGFYFANGIALSKNEDFVVVCESWKFRCRRYWLKGDRAGILDAF--IE----NLPGG 237 (355)
Q Consensus 173 ~~~dp~~-----~~~~~----~~~~~~~pngi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~--~~----~~~g~ 237 (355)
..+|.++ +++.. ...-...|. + +++++.+|+... +.++.++..+........+ .. .....
T Consensus 188 ~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~--~-~~~~~~~~~vs~--~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~ 262 (368)
T 1mda_H 188 AASDLAAAPAAAGIVGAQCTGAQNCSSQAA--Q-ANYPGMLVWAVA--SSILQGDIPAAGATMKAAIDGNESGRKADNFR 262 (368)
T ss_dssp EEEECCSSCCCCEECCCCSCTTSCBCSCCE--E-ETTTTEEEECBS--SCCEEEECCSSCCEEECCCCSSCTHHHHTTEE
T ss_pred EEEECccccccCCeEEEEeeeeeeCCCCcc--c-cccCCEEEEEcC--CEEEEEECCCCcceEEEEEEeccccccccccc
Confidence 4455443 22110 000112343 3 667776777665 7899999754221111111 00 00113
Q ss_pred cCc---eEECCCC-CEEEEeecC-CchhhHhhhcchhHHHHHHhccchhhcccCCCCCCceEEEEEeCCCCeEEEEEECC
Q 018474 238 PDN---INLAPDG-SFWIGLIKM-NQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDP 312 (355)
Q Consensus 238 p~~---i~~d~~G-~lwv~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~ 312 (355)
|.+ +.++++| ++||++... +..+ .. ..++..+|.++++.+..+...
T Consensus 263 p~g~~~v~~s~dg~~lyV~~~~~~~~~~----------------------------~~-~~~~~ViD~~t~~vv~~i~vg 313 (368)
T 1mda_H 263 SAGFQMVAKLKNTDGIMILTVEHSRSCL----------------------------AA-AENTSSVTASVGQTSGPISNG 313 (368)
T ss_dssp ECSSSCEEEETTTTEEEEEEEECSSCTT----------------------------SC-EEEEEEEESSSCCEEECCEEE
T ss_pred cCcceeeEEcCCCCEEEEEeccccCccc----------------------------cc-CCCEEEEECCCCeEEEEEECC
Confidence 444 7788887 599987621 1000 00 135668998778877776542
Q ss_pred CCCcccceeEEEEe--CCEEEEeec-CCCeEEEeeCCCC
Q 018474 313 DATYISFVTSAAEF--DGNLYLASL-QSNFIGILPLDGP 348 (355)
Q Consensus 313 ~g~~~~~~~~~~~~--~g~L~v~~~-~~~~i~~~~~~~~ 348 (355)
. .+.++... +.++|+++. .++.|.++++.+.
T Consensus 314 ~-----~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~ 347 (368)
T 1mda_H 314 H-----DSDAIIAAQDGASDNYANSAGTEVLDIYDAASD 347 (368)
T ss_dssp E-----EECEEEECCSSSCEEEEEETTTTEEEEEESSSC
T ss_pred C-----CcceEEECCCCCEEEEEccCCCCeEEEEECCCC
Confidence 2 24445543 356999988 6999999998764
No 174
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=98.68 E-value=6.6e-06 Score=73.81 Aligned_cols=217 Identities=10% Similarity=0.075 Sum_probs=135.2
Q ss_pred CceEEEeeCCCeEEEEec--------------CCEEEEEEcCCCeeEEeeccCCCcccCeEECCCCCEEEEe---CC-Cc
Q 018474 54 PEDVSVVVSKGALYTATR--------------DGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGGVILCD---NE-KG 115 (355)
Q Consensus 54 p~~i~~d~~~g~l~~~~~--------------~g~i~~~~~~~g~~~~~~~~~~~p~~gl~~d~~g~L~v~~---~~-~g 115 (355)
+..|.. .++.+|.... ...|++++...++.+.+.... .. .+..+ ++.||+++ .. ..
T Consensus 57 ~~~i~~--~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~~~--~~-~~s~~-g~~Iy~~~~~~~~~~~ 130 (302)
T 3s25_A 57 AMYINA--DKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDPDP--CI-YASLI-GNYIYYLHYDTQTATS 130 (302)
T ss_dssp EEEEEE--CSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEECSC--EE-EEEEE-TTEEEEEEESSSSCEE
T ss_pred eeeEEE--cCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeecCC--cc-EEEEe-CCEEEEEeecCCCCce
Confidence 345544 4777776543 247899998665545443221 11 23332 45788887 22 35
Q ss_pred EEEEcCCC--eEEEcCCcCCcccEEEccCC-cEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeecccccc
Q 018474 116 LLKVTEEG--VEAIVPDASFTNDVIAASDG-TLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYFA 192 (355)
Q Consensus 116 l~~~~~~g--~~~~~~~~~~~~~l~~d~dG-~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~~~~p 192 (355)
|++++.+| .+.+..... ..++++| .||+++.. ...|++.+.+++..+.+..+ +
T Consensus 131 Iy~~~~dGs~~~~lt~~~~----~~~~~~g~~iy~t~~g-----------------~~~Iy~~~l~g~~~~~l~~~---~ 186 (302)
T 3s25_A 131 LYRIRIDGEEKKKIKNHYL----FTCNTSDRYFYYNNPK-----------------NGQLYRYDTASQSEALFYDC---N 186 (302)
T ss_dssp EEEEETTSCCCEEEESSCC----CCSEEETTEEEEECTT-----------------TCCEEEEETTTTEEEEEECS---C
T ss_pred EEEEECCCCCeEEEeCCCc----eEeeEECCEEEEEeCC-----------------CceEEEEECCCCCEEEEeCC---C
Confidence 88888655 565555322 3346665 89998753 34799999887776666543 2
Q ss_pred ccEEEeCCCCEEEEEeCCC-CeEEEEEeCCCCCcceeEecccCCCCcCceEECCCC-CEEEEeecCCchhhHhhhcchhH
Q 018474 193 NGIALSKNEDFVVVCESWK-FRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDG-SFWIGLIKMNQTGVRAIQKCREK 270 (355)
Q Consensus 193 ngi~~~~dg~~l~v~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G-~lwv~~~~~~~~~~~~~~~~~~~ 270 (355)
...+++|+++.+||++... ..|.+.+++|.. .+.+.+. ..| .++.+| .||.+....
T Consensus 187 ~~~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~---~~~Lt~~--~~~---~~~~~g~~Iy~~~~~~-------------- 244 (302)
T 3s25_A 187 CYKPVVLDDTNVYYMDVNRDNAIVHVNINNPN---PVVLTEA--NIE---HYNVYGSLIFYQRGGD-------------- 244 (302)
T ss_dssp EEEEEEEETTEEEEEEGGGTTEEEEECSSSCC---CEECSCS--CEE---EEEEETTEEEEEECSS--------------
T ss_pred ccceeeecCCEEEEEEcCCCcEEEEEECCCCC---eEEEeCC--Ccc---eEEECCCEEEEEECCC--------------
Confidence 2345779999999998653 589999987743 2333321 112 244445 455543321
Q ss_pred HHHHHhccchhhcccCCCCCCceEEEEEeCCCCeEEEEEECCCCCcccceeEEEEeCCEEEEeecCCCeEEEeeCCCCCC
Q 018474 271 WELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFDGNLYLASLQSNFIGILPLDGPEP 350 (355)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~~~i~~~~~~~~~~ 350 (355)
...|.+++. +|...+.+.... ...+...+++||........|.+++++++..
T Consensus 245 ---------------------~~~i~~~~~-DG~~r~~l~~~~------~~~i~i~~d~Iy~td~~~~~i~~~~~dGs~~ 296 (302)
T 3s25_A 245 ---------------------NPALCVVKN-DGTGFKELAKGE------FCNINVTSQYVYFTDFVSNKEYCTSTQNPDT 296 (302)
T ss_dssp ---------------------SCEEEEEET-TSCCCEEEEESC------EEEEEECSSEEEEEETTTCCEEEEESSSCCS
T ss_pred ---------------------CcEEEEEEC-CCCccEEeeCCc------cceEEEeCCEEEEEECCCCeEEEEECCCCCc
Confidence 146888998 886544443322 2356778999999999888999999887653
No 175
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.67 E-value=4.7e-05 Score=70.56 Aligned_cols=227 Identities=8% Similarity=-0.024 Sum_probs=134.5
Q ss_pred eEEEeeCCCeEEEEecCCEEEEEEcCCCeeEEeecc--CCCcccCeEECCCCCEEEE-eCCCcEEEEc-CCC--eEEEcC
Q 018474 56 DVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHI--DSQSLLGLTTTKDGGVILC-DNEKGLLKVT-EEG--VEAIVP 129 (355)
Q Consensus 56 ~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~~~~--~~~p~~gl~~d~~g~L~v~-~~~~gl~~~~-~~g--~~~~~~ 129 (355)
++.++ ++.++++..+|.|+.++..+++....... ...+. ++++.++|+++++ ...+.+..++ .++ +..+..
T Consensus 98 ~~~~s--~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~-~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 174 (401)
T 4aez_A 98 LLDWS--NLNVVAVALERNVYVWNADSGSVSALAETDESTYVA-SVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAG 174 (401)
T ss_dssp CEEEC--TTSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEE-EEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECC
T ss_pred EEeec--CCCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEE-EEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecC
Confidence 45555 56688888899999999988876654433 34566 8999999875554 4344455666 345 555544
Q ss_pred CcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCC-Ce-EEEeeccccccccEEEeCCCCEEEEE
Q 018474 130 DASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKL-KE-TTVLHEGFYFANGIALSKNEDFVVVC 207 (355)
Q Consensus 130 ~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~-~~-~~~~~~~~~~pngi~~~~dg~~l~v~ 207 (355)
....+.++.++ +++.++.+. .+.+..||... +. ...+........+++++|+++.++.+
T Consensus 175 ~~~~v~~~~~~--~~~l~~~~~-----------------dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 235 (401)
T 4aez_A 175 HQARVGCLSWN--RHVLSSGSR-----------------SGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASG 235 (401)
T ss_dssp CSSCEEEEEEE--TTEEEEEET-----------------TSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEE
T ss_pred CCCceEEEEEC--CCEEEEEcC-----------------CCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEE
Confidence 44566777773 444444322 56788888763 22 33333333456789999999966555
Q ss_pred eCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCC-EEEEeecCCchhhHhhhcchhHHHHHHhccchhhcccC
Q 018474 208 ESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGS-FWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLP 286 (355)
Q Consensus 208 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~-lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (355)
. ..+.|..|++.... ....+. ........+.+.++|. ++++..+
T Consensus 236 ~-~d~~v~iwd~~~~~--~~~~~~-~~~~~v~~~~~~p~~~~ll~~~~g------------------------------- 280 (401)
T 4aez_A 236 G-NDNVVQIWDARSSI--PKFTKT-NHNAAVKAVAWCPWQSNLLATGGG------------------------------- 280 (401)
T ss_dssp E-TTSCEEEEETTCSS--EEEEEC-CCSSCCCEEEECTTSTTEEEEECC-------------------------------
T ss_pred e-CCCeEEEccCCCCC--ccEEec-CCcceEEEEEECCCCCCEEEEecC-------------------------------
Confidence 4 56789999985421 122222 2333456788888775 5544321
Q ss_pred CCCCCceEEEEEeCCCCeEEEEEECCCCCcccceeEEEEe-C-CEEEEe-ecCCCeEEEeeCCC
Q 018474 287 MGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF-D-GNLYLA-SLQSNFIGILPLDG 347 (355)
Q Consensus 287 ~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-~-g~L~v~-~~~~~~i~~~~~~~ 347 (355)
...+.|..+|..+++....+.... .++.+... + ..|+.+ +...+.|..++++.
T Consensus 281 ---s~d~~i~i~d~~~~~~~~~~~~~~-----~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~ 336 (401)
T 4aez_A 281 ---TMDKQIHFWNAATGARVNTVDAGS-----QVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSS 336 (401)
T ss_dssp ---TTTCEEEEEETTTCCEEEEEECSS-----CEEEEEECSSSSEEEEEECTTTCEEEEEEEET
T ss_pred ---CCCCEEEEEECCCCCEEEEEeCCC-----cEEEEEECCCCCeEEEEeecCCCcEEEEecCC
Confidence 122467777865677766664322 34444443 2 334442 33466666666554
No 176
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.67 E-value=1.7e-05 Score=77.20 Aligned_cols=238 Identities=12% Similarity=0.051 Sum_probs=142.0
Q ss_pred CCCCceEEEeeCCCeEEEEecCCEEEEEEcCCC----ee-EEeeccCCC-cccCeEECC--CCCEEEEeCCCc-EEEEcC
Q 018474 51 VNHPEDVSVVVSKGALYTATRDGWVKYFILHNE----TL-VNWKHIDSQ-SLLGLTTTK--DGGVILCDNEKG-LLKVTE 121 (355)
Q Consensus 51 ~~~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g----~~-~~~~~~~~~-p~~gl~~d~--~g~L~v~~~~~g-l~~~~~ 121 (355)
...+.++++.+++..+.++. ++.|..++..++ +. ..+...... +. ++++.+ +|+++++...+| +..++.
T Consensus 18 ~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~-~~~~sp~~~~~~l~s~~~dg~v~vw~~ 95 (615)
T 1pgu_A 18 RNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVT-TVKFSPIKGSQYLCSGDESGKVIVWGW 95 (615)
T ss_dssp TTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEE-EEEECSSTTCCEEEEEETTSEEEEEEE
T ss_pred cCceeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEE-EEEECcCCCCCEEEEecCCCEEEEEeC
Confidence 45678899997666666666 788999998777 43 333333345 67 899999 998666544445 444442
Q ss_pred ---------CC--eEEEcCCcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeecccc
Q 018474 122 ---------EG--VEAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFY 190 (355)
Q Consensus 122 ---------~g--~~~~~~~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~~~ 190 (355)
.. ...+......+.+++++++|+..++.... ....+.++.||. ......+.....
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~-------------~~~~~~v~~~d~-~~~~~~~~~~~~ 161 (615)
T 1pgu_A 96 TFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEG-------------RDNFGVFISWDS-GNSLGEVSGHSQ 161 (615)
T ss_dssp EEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECC-------------SSCSEEEEETTT-CCEEEECCSCSS
T ss_pred CCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccC-------------CCCccEEEEEEC-CCcceeeecCCc
Confidence 12 23333333678899999999765543320 011356777773 333444333334
Q ss_pred ccccEEEeCCCCEEEEEeCCCCeEEEEEeCCCCCcceeEecccCCC---CcCceEECCC-CCEEEEeecCCchhhHhhhc
Q 018474 191 FANGIALSKNEDFVVVCESWKFRCRRYWLKGDRAGILDAFIENLPG---GPDNINLAPD-GSFWIGLIKMNQTGVRAIQK 266 (355)
Q Consensus 191 ~pngi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g---~p~~i~~d~~-G~lwv~~~~~~~~~~~~~~~ 266 (355)
....++++|+++.++++....+.|..|++...+ ....+. .... ....+.++++ |++.++....
T Consensus 162 ~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~--~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~~~~~d---------- 228 (615)
T 1pgu_A 162 RINACHLKQSRPMRSMTVGDDGSVVFYQGPPFK--FSASDR-THHKQGSFVRDVEFSPDSGEFVITVGSD---------- 228 (615)
T ss_dssp CEEEEEECSSSSCEEEEEETTTEEEEEETTTBE--EEEEEC-SSSCTTCCEEEEEECSTTCCEEEEEETT----------
T ss_pred cEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcc--eeeeec-ccCCCCceEEEEEECCCCCCEEEEEeCC----------
Confidence 567899999998555666667889999864321 122222 2222 2445778888 8866655431
Q ss_pred chhHHHHHHhccchhhcccCCCCCCceEEEEEeCCCCeEEEEE-E---CCCCCcccceeEEEEeCCEEEEeecCCCeEEE
Q 018474 267 CREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDF-N---DPDATYISFVTSAAEFDGNLYLASLQSNFIGI 342 (355)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~-~---~~~g~~~~~~~~~~~~~g~L~v~~~~~~~i~~ 342 (355)
+.|..+|..+++.+..+ . .+.+ .+..+...++++++.......|..
T Consensus 229 --------------------------g~i~vwd~~~~~~~~~~~~~~~~~~~----~v~~~~~~~~~~l~~~~~d~~i~~ 278 (615)
T 1pgu_A 229 --------------------------RKISCFDGKSGEFLKYIEDDQEPVQG----GIFALSWLDSQKFATVGADATIRV 278 (615)
T ss_dssp --------------------------CCEEEEETTTCCEEEECCBTTBCCCS----CEEEEEESSSSEEEEEETTSEEEE
T ss_pred --------------------------CeEEEEECCCCCEeEEecccccccCC----ceEEEEEcCCCEEEEEcCCCcEEE
Confidence 35777886578877777 3 3222 344444434443343334677777
Q ss_pred eeCCC
Q 018474 343 LPLDG 347 (355)
Q Consensus 343 ~~~~~ 347 (355)
+++++
T Consensus 279 wd~~~ 283 (615)
T 1pgu_A 279 WDVTT 283 (615)
T ss_dssp EETTT
T ss_pred EECCC
Confidence 77764
No 177
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=98.66 E-value=8.7e-06 Score=75.51 Aligned_cols=184 Identities=10% Similarity=0.013 Sum_probs=116.2
Q ss_pred CCCCceEEEee-CCCeEEEEecCCEEEEEEcCCCe--------eEEeeccCCCcccCeEECCCC-CEEEEeCCCc-EEEE
Q 018474 51 VNHPEDVSVVV-SKGALYTATRDGWVKYFILHNET--------LVNWKHIDSQSLLGLTTTKDG-GVILCDNEKG-LLKV 119 (355)
Q Consensus 51 ~~~p~~i~~d~-~~g~l~~~~~~g~i~~~~~~~g~--------~~~~~~~~~~p~~gl~~d~~g-~L~v~~~~~g-l~~~ 119 (355)
-....++++.+ ++..|++++.+|.|..++..++. ...+......+. ++++.++| +++++...++ +..+
T Consensus 81 ~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~-~~~~~p~~~~~l~s~~~dg~i~iw 159 (402)
T 2aq5_A 81 TAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVG-IVAWHPTAQNVLLSAGCDNVILVW 159 (402)
T ss_dssp SSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEE-EEEECSSBTTEEEEEETTSCEEEE
T ss_pred CCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEE-EEEECcCCCCEEEEEcCCCEEEEE
Confidence 34567889986 56778888899999999987663 223322334566 89999887 5555443444 6666
Q ss_pred c-CCC--eEEE--cCCcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEee-ccc--cc
Q 018474 120 T-EEG--VEAI--VPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH-EGF--YF 191 (355)
Q Consensus 120 ~-~~g--~~~~--~~~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~-~~~--~~ 191 (355)
+ .++ ...+ ......+.+++++++|+++++... .+.+..||..+++..... ... ..
T Consensus 160 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----------------d~~i~iwd~~~~~~~~~~~~~~~~~~ 222 (402)
T 2aq5_A 160 DVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCR-----------------DKRVRVIEPRKGTVVAEKDRPHEGTR 222 (402)
T ss_dssp ETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEET-----------------TSEEEEEETTTTEEEEEEECSSCSSS
T ss_pred ECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEec-----------------CCcEEEEeCCCCceeeeeccCCCCCc
Confidence 6 455 5555 333367889999999976655332 567999999887654333 222 23
Q ss_pred cccEEEeCCCCEEEEEe--CCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCCEEEEe
Q 018474 192 ANGIALSKNEDFVVVCE--SWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGL 253 (355)
Q Consensus 192 pngi~~~~dg~~l~v~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~ 253 (355)
+..+++++|++.++.+. ...+.|..|+++........... ........+.++++|++.+.+
T Consensus 223 ~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~ 285 (402)
T 2aq5_A 223 PVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQEL-DTSSGVLLPFFDPDTNIVYLC 285 (402)
T ss_dssp CCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEEC-CCCSSCEEEEEETTTTEEEEE
T ss_pred ceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEec-cCCCceeEEEEcCCCCEEEEE
Confidence 57899999998554442 45678888988643221111111 122234567788999866544
No 178
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=98.66 E-value=1.9e-05 Score=69.76 Aligned_cols=231 Identities=14% Similarity=0.102 Sum_probs=140.3
Q ss_pred CCCceEEEeeCCCeEEEEecCCEEEEEEcCCC---e-eEEeeccCCCcccCeEECCCCCEEEEeCCCcEEEEcCCC-eEE
Q 018474 52 NHPEDVSVVVSKGALYTATRDGWVKYFILHNE---T-LVNWKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVTEEG-VEA 126 (355)
Q Consensus 52 ~~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g---~-~~~~~~~~~~p~~gl~~d~~g~L~v~~~~~gl~~~~~~g-~~~ 126 (355)
....++++.+++..++++..+|.|..++..+. + ...+........ .+.++ .+.|+.+...+.+..++... ...
T Consensus 60 ~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~-~~~l~~~~~d~~i~~~d~~~~~~~ 137 (313)
T 3odt_A 60 GFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVC-SLSFQ-DGVVISGSWDKTAKVWKEGSLVYN 137 (313)
T ss_dssp SCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEE-EEEEE-TTEEEEEETTSEEEEEETTEEEEE
T ss_pred ccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEE-EEEec-CCEEEEEeCCCCEEEEcCCcEEEe
Confidence 55678899977788888999999988886443 2 222222233455 77773 33455555444455555322 444
Q ss_pred EcCCcCCcccEEEcc-CCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeec-cccccccEEEeCCCCEE
Q 018474 127 IVPDASFTNDVIAAS-DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHE-GFYFANGIALSKNEDFV 204 (355)
Q Consensus 127 ~~~~~~~~~~l~~d~-dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~-~~~~pngi~~~~dg~~l 204 (355)
+......+.++.+.+ +++..++... .+.+..||.. .....+.. .......++++++++ +
T Consensus 138 ~~~~~~~v~~~~~~~~~~~~l~~~~~-----------------d~~i~i~d~~-~~~~~~~~~~~~~i~~~~~~~~~~-~ 198 (313)
T 3odt_A 138 LQAHNASVWDAKVVSFSENKFLTASA-----------------DKTIKLWQND-KVIKTFSGIHNDVVRHLAVVDDGH-F 198 (313)
T ss_dssp EECCSSCEEEEEEEETTTTEEEEEET-----------------TSCEEEEETT-EEEEEECSSCSSCEEEEEEEETTE-E
T ss_pred cccCCCceeEEEEccCCCCEEEEEEC-----------------CCCEEEEecC-ceEEEEeccCcccEEEEEEcCCCe-E
Confidence 444335677777776 6665554332 4568888832 22333322 334457789999987 4
Q ss_pred EEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCCEEEEeecCCchhhHhhhcchhHHHHHHhccchhhcc
Q 018474 205 VVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLL 284 (355)
Q Consensus 205 ~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (355)
+ +....+.|..|+++... ....+. ...+....+.++++|.+..+...
T Consensus 199 ~-~~~~dg~i~i~d~~~~~--~~~~~~-~~~~~i~~~~~~~~~~l~~~~~d----------------------------- 245 (313)
T 3odt_A 199 I-SCSNDGLIKLVDMHTGD--VLRTYE-GHESFVYCIKLLPNGDIVSCGED----------------------------- 245 (313)
T ss_dssp E-EEETTSEEEEEETTTCC--EEEEEE-CCSSCEEEEEECTTSCEEEEETT-----------------------------
T ss_pred E-EccCCCeEEEEECCchh--hhhhhh-cCCceEEEEEEecCCCEEEEecC-----------------------------
Confidence 4 44567889999985432 122222 23334566788888876665543
Q ss_pred cCCCCCCceEEEEEeCCCCeEEEEEECCCCCcccceeEEEEe-CCEEEEeecCCCeEEEeeCCCCC
Q 018474 285 LPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF-DGNLYLASLQSNFIGILPLDGPE 349 (355)
Q Consensus 285 ~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-~g~L~v~~~~~~~i~~~~~~~~~ 349 (355)
+.|..+|..+++....+..+.+ .+..+... ++++..++ ..+.|..+++....
T Consensus 246 --------g~v~iwd~~~~~~~~~~~~~~~----~i~~~~~~~~~~~~~~~-~dg~i~iw~~~~~~ 298 (313)
T 3odt_A 246 --------RTVRIWSKENGSLKQVITLPAI----SIWSVDCMSNGDIIVGS-SDNLVRIFSQEKSR 298 (313)
T ss_dssp --------SEEEEECTTTCCEEEEEECSSS----CEEEEEECTTSCEEEEE-TTSCEEEEESCGGG
T ss_pred --------CEEEEEECCCCceeEEEeccCc----eEEEEEEccCCCEEEEe-CCCcEEEEeCCCCc
Confidence 4688888768888888876654 35556554 46655544 47889888877643
No 179
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=98.65 E-value=4.4e-05 Score=68.55 Aligned_cols=184 Identities=8% Similarity=0.111 Sum_probs=114.7
Q ss_pred CCCCCCceEEEeeCCCeEEEEecCCEEEEEEcCCCeeEE-eeccCCCcccCeEECCCCCEEEEeCCCcEE-EEcCCC--e
Q 018474 49 GCVNHPEDVSVVVSKGALYTATRDGWVKYFILHNETLVN-WKHIDSQSLLGLTTTKDGGVILCDNEKGLL-KVTEEG--V 124 (355)
Q Consensus 49 ~~~~~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~-~~~~~~~p~~gl~~d~~g~L~v~~~~~gl~-~~~~~g--~ 124 (355)
+.-..-.++++.+++..+..++.++.|..+|..+++... +......+. ++++++++.++++...++.+ .++..+ +
T Consensus 63 ~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~ 141 (319)
T 3frx_A 63 GHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVM-SVDIDKKASMIISGSRDKTIKVWTIKGQCL 141 (319)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEE-EEEECTTSCEEEEEETTSCEEEEETTSCEE
T ss_pred CCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEE-EEEEcCCCCEEEEEeCCCeEEEEECCCCeE
Confidence 333445677888667778888999999999998887543 332334566 88999999877665555544 445444 5
Q ss_pred EEEcCCcCCcccEEEccC------CcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeecc-ccccccEEE
Q 018474 125 EAIVPDASFTNDVIAASD------GTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEG-FYFANGIAL 197 (355)
Q Consensus 125 ~~~~~~~~~~~~l~~d~d------G~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~-~~~pngi~~ 197 (355)
..+......+..+.+.+. +.+.++.+ ..+.+..||..+.+......+ ....+.+++
T Consensus 142 ~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~-----------------~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~ 204 (319)
T 3frx_A 142 ATLLGHNDWVSQVRVVPNEKADDDSVTIISAG-----------------NDKMVKAWNLNQFQIEADFIGHNSNINTLTA 204 (319)
T ss_dssp EEECCCSSCEEEEEECCC------CCEEEEEE-----------------TTSCEEEEETTTTEEEEEECCCCSCEEEEEE
T ss_pred EEEeccCCcEEEEEEccCCCCCCCccEEEEEe-----------------CCCEEEEEECCcchhheeecCCCCcEEEEEE
Confidence 554444355667777663 33444322 256788888877765433322 234578999
Q ss_pred eCCCCEEEEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCCEEEEeec
Q 018474 198 SKNEDFVVVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIK 255 (355)
Q Consensus 198 ~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~ 255 (355)
+||++.+. +....+.|..|++...+ ....+. .......+.++++|.+.++...
T Consensus 205 sp~g~~l~-s~~~dg~i~iwd~~~~~--~~~~~~--~~~~v~~~~~sp~~~~la~~~~ 257 (319)
T 3frx_A 205 SPDGTLIA-SAGKDGEIMLWNLAAKK--AMYTLS--AQDEVFSLAFSPNRYWLAAATA 257 (319)
T ss_dssp CTTSSEEE-EEETTCEEEEEETTTTE--EEEEEE--CCSCEEEEEECSSSSEEEEEET
T ss_pred cCCCCEEE-EEeCCCeEEEEECCCCc--EEEEec--CCCcEEEEEEcCCCCEEEEEcC
Confidence 99999554 44456789889875432 112221 1222456788999977665543
No 180
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=98.64 E-value=1.4e-07 Score=90.39 Aligned_cols=73 Identities=18% Similarity=0.149 Sum_probs=55.7
Q ss_pred cCCcccEEEccCCcEEE-EeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeecc--ccccccEEEeCCCCEEEEE
Q 018474 131 ASFTNDVIAASDGTLYF-TVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEG--FYFANGIALSKNEDFVVVC 207 (355)
Q Consensus 131 ~~~~~~l~~d~dG~ly~-~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~--~~~pngi~~~~dg~~l~v~ 207 (355)
++.|++|++|++|+||| +|... +.. ..+++.....+|+++|.+++++.+... ...|||++++||++.||++
T Consensus 475 fnsPDnL~fd~~G~LWf~TD~~~--~~~----g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 475 FNSPDGLGFDKAGRLWILTDGDS--SNA----GDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CCCEEEEEECTTCCEEEEECCCC--CCS----GGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred cCCCCceEECCCCCEEEEeCCCc--Ccc----ccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence 38899999999999999 77542 111 112233355899999999999888754 3568999999999999997
Q ss_pred eC
Q 018474 208 ES 209 (355)
Q Consensus 208 ~~ 209 (355)
-.
T Consensus 549 vQ 550 (592)
T 4a9v_A 549 IQ 550 (592)
T ss_dssp EE
T ss_pred Ee
Confidence 53
No 181
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=98.64 E-value=2e-06 Score=78.97 Aligned_cols=181 Identities=11% Similarity=0.034 Sum_probs=104.9
Q ss_pred CCceEEEeeCCCeEEEEec------CCEEEEEEcCCCeeEE-----eeccCCCcccCeEECCCCCEEEEeCCCcEEEEc-
Q 018474 53 HPEDVSVVVSKGALYTATR------DGWVKYFILHNETLVN-----WKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVT- 120 (355)
Q Consensus 53 ~p~~i~~d~~~g~l~~~~~------~g~i~~~~~~~g~~~~-----~~~~~~~p~~gl~~d~~g~L~v~~~~~gl~~~~- 120 (355)
.-.++++.|++..|..++. ++.|..++..++.... .......+. .+++.++++++++...+.+..++
T Consensus 44 ~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~-~~~~s~d~~~l~~s~dg~v~lWd~ 122 (357)
T 4g56_B 44 QIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVT-DVAWVSEKGILVASDSGAVELWEI 122 (357)
T ss_dssp EEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEE-EEEEETTTEEEEEETTSCEEEC--
T ss_pred CEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEE-EEEEcCCCCEEEEECCCEEEEeec
Confidence 3568899976666666665 5677777765553211 111123366 88999999988887554444444
Q ss_pred CCC--eE--E--EcCCcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeecc-ccccc
Q 018474 121 EEG--VE--A--IVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEG-FYFAN 193 (355)
Q Consensus 121 ~~g--~~--~--~~~~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~-~~~pn 193 (355)
.++ .. . .......++++++.++|+..++.+. .+.+..||.++++....... ....+
T Consensus 123 ~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~-----------------dg~v~iwd~~~~~~~~~~~~h~~~v~ 185 (357)
T 4g56_B 123 LEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGK-----------------DFSVKVWDLSQKAVLKSYNAHSSEVN 185 (357)
T ss_dssp ------CCCCEEECCCSSCEEEEEECSSSSEEEEEET-----------------TSCEEEEETTTTEEEEEECCCSSCEE
T ss_pred cccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeC-----------------CCeEEEEECCCCcEEEEEcCCCCCEE
Confidence 333 11 1 1112256889999999987776433 45788899888865443332 33456
Q ss_pred cEEEeCCCCEEEEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCC-CEEEE
Q 018474 194 GIALSKNEDFVVVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDG-SFWIG 252 (355)
Q Consensus 194 gi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G-~lwv~ 252 (355)
.++++++++.++++....+.|..|+++..+......+. .....+..+.+.+++ +++++
T Consensus 186 ~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~-~~~~~v~~v~~sp~~~~~la~ 244 (357)
T 4g56_B 186 CVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFC-ASDTIPTSVTWHPEKDDTFAC 244 (357)
T ss_dssp EEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCT-TCCSCEEEEEECTTSTTEEEE
T ss_pred EEEEccCCCceeeeeccCCceEEEECCCCceeeeeeec-cccccccchhhhhcccceEEE
Confidence 78999998766666666778888887543211111111 112234556677664 45543
No 182
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=98.62 E-value=2.7e-06 Score=80.12 Aligned_cols=184 Identities=10% Similarity=0.068 Sum_probs=114.1
Q ss_pred CCceEEEeeCC-CeEEEEecCCEEEEEEcCCCeeEEeec---cCCCcccCeEECC-CCCEEEEeCCCcEEEE-cC-CC-e
Q 018474 53 HPEDVSVVVSK-GALYTATRDGWVKYFILHNETLVNWKH---IDSQSLLGLTTTK-DGGVILCDNEKGLLKV-TE-EG-V 124 (355)
Q Consensus 53 ~p~~i~~d~~~-g~l~~~~~~g~i~~~~~~~g~~~~~~~---~~~~p~~gl~~d~-~g~L~v~~~~~gl~~~-~~-~g-~ 124 (355)
.-.+|++.|.+ ..|.+|+.+|.|..+|..+++...... ..+.+. ++++.+ +++++++...+|.+++ +- .+ .
T Consensus 121 ~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~-~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~ 199 (435)
T 4e54_B 121 RATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSIT-GLKFNPLNTNQFYASSMEGTTRLQDFKGNIL 199 (435)
T ss_dssp CEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCC-EEEECSSCTTEEEEECSSSCEEEEETTSCEE
T ss_pred CEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEE-EEEEeCCCCCEEEEEeCCCEEEEeeccCCce
Confidence 35689998744 457788999999999986665433322 234567 899985 6776666555564544 53 44 4
Q ss_pred EEEcCCc---CCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeeccccccccEEEeCCC
Q 018474 125 EAIVPDA---SFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYFANGIALSKNE 201 (355)
Q Consensus 125 ~~~~~~~---~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~~~~pngi~~~~dg 201 (355)
+.+.... ..+..+.++++|.+.++... .+.+..||.+++.+..+.......+.++++|++
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~-----------------dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~ 262 (435)
T 4e54_B 200 RVFASSDTINIWFCSLDVSASSRMVVTGDN-----------------VGNVILLNMDGKELWNLRMHKKKVTHVALNPCC 262 (435)
T ss_dssp EEEECCSSCSCCCCCEEEETTTTEEEEECS-----------------SSBEEEEESSSCBCCCSBCCSSCEEEEEECTTC
T ss_pred eEEeccCCCCccEEEEEECCCCCEEEEEeC-----------------CCcEeeeccCcceeEEEecccceEEeeeecCCC
Confidence 4443321 45677899999987776433 567888888665543333222335678999998
Q ss_pred CEEEEEeCCCCeEEEEEeCCCCC-cceeEecccCCCCcCceEECCCCCEEEEeec
Q 018474 202 DFVVVCESWKFRCRRYWLKGDRA-GILDAFIENLPGGPDNINLAPDGSFWIGLIK 255 (355)
Q Consensus 202 ~~l~v~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~ 255 (355)
+.++++....+.|..|++..... ....... ........+.++++|++.++...
T Consensus 263 ~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~-~h~~~v~~~~~spdg~~l~s~~~ 316 (435)
T 4e54_B 263 DWFLATASVDQTVKIWDLRQVRGKASFLYSL-PHRHPVNAACFSPDGARLLTTDQ 316 (435)
T ss_dssp SSEEEEEETTSBCCEEETTTCCSSSCCSBCC-BCSSCEEECCBCTTSSEEEEEES
T ss_pred ceEEEEecCcceeeEEecccccccceEEEee-eccccccceeECCCCCeeEEEcC
Confidence 86777766677888888754321 1111000 11122344667888887666544
No 183
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=98.62 E-value=7.5e-05 Score=68.49 Aligned_cols=240 Identities=9% Similarity=-0.006 Sum_probs=138.4
Q ss_pred CCCCceEEEee-CCCeEEEEecCCEEEEEEcCCCeeEEeeccCCCcccCeEECC---CCCE-EEEeCCCcEEEEc-CCC-
Q 018474 51 VNHPEDVSVVV-SKGALYTATRDGWVKYFILHNETLVNWKHIDSQSLLGLTTTK---DGGV-ILCDNEKGLLKVT-EEG- 123 (355)
Q Consensus 51 ~~~p~~i~~d~-~~g~l~~~~~~g~i~~~~~~~g~~~~~~~~~~~p~~gl~~d~---~g~L-~v~~~~~gl~~~~-~~g- 123 (355)
-....++++.+ .+..+++++.+|.|..++..+++............ .+.+.+ ++.+ +++...+.+..++ .++
T Consensus 99 ~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~ 177 (408)
T 4a11_B 99 RYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVY-SHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGS 177 (408)
T ss_dssp SSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEECSSCEE-EEEECSSCSSCCEEEEEESSSSEEEEESSSSC
T ss_pred CCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccCCCcee-eeEeecCCCCCcEEEEEcCCCeEEEEeCCCcc
Confidence 35567888886 34567778889999999998887655444344455 666654 3444 4455444566777 445
Q ss_pred -eEEEcCCcCCcccEEEccCCc-EEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCe--EEEe--------------
Q 018474 124 -VEAIVPDASFTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKE--TTVL-------------- 185 (355)
Q Consensus 124 -~~~~~~~~~~~~~l~~d~dG~-ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~--~~~~-------------- 185 (355)
...+......+.++++++++. ++++... .+.+..||..+++ ...+
T Consensus 178 ~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~-----------------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (408)
T 4a11_B 178 CSHILQGHRQEILAVSWSPRYDYILATASA-----------------DSRVKLWDVRRASGCLITLDQHNGKKSQAVESA 240 (408)
T ss_dssp CCEEECCCCSCEEEEEECSSCTTEEEEEET-----------------TSCEEEEETTCSSCCSEECCTTTTCSCCCTTTS
T ss_pred eeeeecCCCCcEEEEEECCCCCcEEEEEcC-----------------CCcEEEEECCCCCcccccccccccccceeeccc
Confidence 555554446788899999985 5555332 4557777765442 1111
Q ss_pred -eccccccccEEEeCCCCEEEEEeCCCCeEEEEEeCCCCCcce-eEec-c-cCCCCcCceEECCCCCEEEEeecCCchhh
Q 018474 186 -HEGFYFANGIALSKNEDFVVVCESWKFRCRRYWLKGDRAGIL-DAFI-E-NLPGGPDNINLAPDGSFWIGLIKMNQTGV 261 (355)
Q Consensus 186 -~~~~~~pngi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~-~~~~-~-~~~g~p~~i~~d~~G~lwv~~~~~~~~~~ 261 (355)
.........++++|+++.++.+. ..+.|..|++........ .... . ......-....+..+.+.++...
T Consensus 241 ~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 313 (408)
T 4a11_B 241 NTAHNGKVNGLCFTSDGLHLLTVG-TDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYG------ 313 (408)
T ss_dssp SCSCSSCEEEEEECTTSSEEEEEE-TTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEET------
T ss_pred cccccCceeEEEEcCCCCEEEEec-CCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecC------
Confidence 01112346789999999666655 567899999864321110 0000 0 00011111223334455555443
Q ss_pred HhhhcchhHHHHHHhccchhhcccCCCCCCceEEEEEeCCCCeEEEEEECCCCCcccceeEEEEeC-CEEEEeecCCCeE
Q 018474 262 RAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFD-GNLYLASLQSNFI 340 (355)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~-g~L~v~~~~~~~i 340 (355)
+.|..+|..+++.+..+..+.+ .++.+.... +++.++......|
T Consensus 314 -------------------------------~~i~v~d~~~~~~~~~~~~~~~----~v~~~~~s~~~~~l~s~~~dg~i 358 (408)
T 4a11_B 314 -------------------------------STIAVYTVYSGEQITMLKGHYK----TVDCCVFQSNFQELYSGSRDCNI 358 (408)
T ss_dssp -------------------------------TEEEEEETTTCCEEEEECCCSS----CEEEEEEETTTTEEEEEETTSCE
T ss_pred -------------------------------CEEEEEECcCCcceeeeccCCC----eEEEEEEcCCCCEEEEECCCCeE
Confidence 3688888767888888865544 455565543 4444444447788
Q ss_pred EEeeCCCCCC
Q 018474 341 GILPLDGPEP 350 (355)
Q Consensus 341 ~~~~~~~~~~ 350 (355)
...++....+
T Consensus 359 ~iw~~~~~~~ 368 (408)
T 4a11_B 359 LAWVPSLYEP 368 (408)
T ss_dssp EEEEECC---
T ss_pred EEEeCCCCCc
Confidence 8888776543
No 184
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.61 E-value=3.7e-05 Score=72.53 Aligned_cols=193 Identities=13% Similarity=0.092 Sum_probs=112.4
Q ss_pred cccCeEECCCCCEE-EEeCCCc-EEEEc-C--CC--eEEEcC--CcCCcccEEEccCCcEEEEeCCCCCCCccccccccc
Q 018474 95 SLLGLTTTKDGGVI-LCDNEKG-LLKVT-E--EG--VEAIVP--DASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAE 165 (355)
Q Consensus 95 p~~gl~~d~~g~L~-v~~~~~g-l~~~~-~--~g--~~~~~~--~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~ 165 (355)
+. ++++.++|+.+ ++....| +..++ . ++ .+.+.. ....+.+++++++|...++...
T Consensus 105 v~-~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-------------- 169 (450)
T 2vdu_B 105 IR-NLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADK-------------- 169 (450)
T ss_dssp EE-EEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEET--------------
T ss_pred eE-EEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeC--------------
Confidence 56 78899999864 5443444 44444 3 45 444432 2256889999999965544322
Q ss_pred cCCCCeEEEEeCCCCeEE-----EeeccccccccEEEeCC---CCEEEEEeCCCCeEEEEEeCCCCCcceeEecccCCCC
Q 018474 166 GKPYGQLRKYDPKLKETT-----VLHEGFYFANGIALSKN---EDFVVVCESWKFRCRRYWLKGDRAGILDAFIENLPGG 237 (355)
Q Consensus 166 ~~~~g~l~~~dp~~~~~~-----~~~~~~~~pngi~~~~d---g~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~ 237 (355)
.+.++.|+..+++.. .+.........++++|| ++.++.+ ...+.|..|++.... ....+.....+.
T Consensus 170 ---~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~-~~d~~i~vwd~~~~~--~~~~~~~~h~~~ 243 (450)
T 2vdu_B 170 ---FGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITS-DRDEHIKISHYPQCF--IVDKWLFGHKHF 243 (450)
T ss_dssp ---TSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEE-ETTSCEEEEEESCTT--CEEEECCCCSSC
T ss_pred ---CCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEE-cCCCcEEEEECCCCc--eeeeeecCCCCc
Confidence 456788876554432 11222234567899999 7755554 456789999985432 122223233344
Q ss_pred cCceEECCCCCEEEEeecCCchhhHhhhcchhHHHHHHhccchhhcccCCCCCCceEEEEEeCCCCeEEEEEECCC----
Q 018474 238 PDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPD---- 313 (355)
Q Consensus 238 p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~---- 313 (355)
...+.+. +|++.++.... +.|..+|..+|+.+..+....
T Consensus 244 v~~~~~s-d~~~l~s~~~d------------------------------------~~v~vwd~~~~~~~~~~~~~~~~~~ 286 (450)
T 2vdu_B 244 VSSICCG-KDYLLLSAGGD------------------------------------DKIFAWDWKTGKNLSTFDYNSLIKP 286 (450)
T ss_dssp EEEEEEC-STTEEEEEESS------------------------------------SEEEEEETTTCCEEEEEECHHHHGG
T ss_pred eEEEEEC-CCCEEEEEeCC------------------------------------CeEEEEECCCCcEeeeecchhhhhh
Confidence 5667888 88877766442 356667765677666664210
Q ss_pred ----------------C-CcccceeEEEEe--CCEEEEeecCCCeEEEeeC
Q 018474 314 ----------------A-TYISFVTSAAEF--DGNLYLASLQSNFIGILPL 345 (355)
Q Consensus 314 ----------------g-~~~~~~~~~~~~--~g~L~v~~~~~~~i~~~~~ 345 (355)
+ .....+..+... +..|++++-..+.|..+++
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 287 YLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp GCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEE
T ss_pred hhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEe
Confidence 0 001123444433 4567777756778888877
No 185
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=98.61 E-value=4.5e-05 Score=67.34 Aligned_cols=231 Identities=11% Similarity=0.095 Sum_probs=136.5
Q ss_pred CCCCCCceEEEeeCCCeEEEEecCCEEEEEEcCCCeeEEeec-cCCCcccCeEECCCCCEEEEeCCCc-EEEEc--C--C
Q 018474 49 GCVNHPEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKH-IDSQSLLGLTTTKDGGVILCDNEKG-LLKVT--E--E 122 (355)
Q Consensus 49 ~~~~~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~~~-~~~~p~~gl~~d~~g~L~v~~~~~g-l~~~~--~--~ 122 (355)
+.-..-.++++ ++++.+++++.+|.|..++..+++...... ....+. .+++.++++++++....| +..++ . .
T Consensus 16 ~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~ 93 (313)
T 3odt_A 16 GHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLN-SVCYDSEKELLLFGGKDTMINGVPLFATSG 93 (313)
T ss_dssp CCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEE-EEEEETTTTEEEEEETTSCEEEEETTCCTT
T ss_pred CCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEE-EEEECCCCCEEEEecCCCeEEEEEeeecCC
Confidence 44456677888 588899999999999999997776544332 244566 899999988665544545 44343 2 1
Q ss_pred C--eEEEcCCcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeeccccccccEEEeC-
Q 018474 123 G--VEAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYFANGIALSK- 199 (355)
Q Consensus 123 g--~~~~~~~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~~~~pngi~~~~- 199 (355)
+ ...+......+.++.+ ++++.++.+. .+.+..||. ......+.........+++.+
T Consensus 94 ~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~-----------------d~~i~~~d~-~~~~~~~~~~~~~v~~~~~~~~ 153 (313)
T 3odt_A 94 EDPLYTLIGHQGNVCSLSF--QDGVVISGSW-----------------DKTAKVWKE-GSLVYNLQAHNASVWDAKVVSF 153 (313)
T ss_dssp SCC-CEECCCSSCEEEEEE--ETTEEEEEET-----------------TSEEEEEET-TEEEEEEECCSSCEEEEEEEET
T ss_pred CCcccchhhcccCEEEEEe--cCCEEEEEeC-----------------CCCEEEEcC-CcEEEecccCCCceeEEEEccC
Confidence 2 3333333355666766 3444444322 467888882 223333333333345677777
Q ss_pred CCCEEEEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCCEEEEeecCCchhhHhhhcchhHHHHHHhccc
Q 018474 200 NEDFVVVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPG 279 (355)
Q Consensus 200 dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (355)
+++.++.+ ...+.|..|+.. .....+..........+.+.++|.+.++...
T Consensus 154 ~~~~l~~~-~~d~~i~i~d~~----~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d------------------------ 204 (313)
T 3odt_A 154 SENKFLTA-SADKTIKLWQND----KVIKTFSGIHNDVVRHLAVVDDGHFISCSND------------------------ 204 (313)
T ss_dssp TTTEEEEE-ETTSCEEEEETT----EEEEEECSSCSSCEEEEEEEETTEEEEEETT------------------------
T ss_pred CCCEEEEE-ECCCCEEEEecC----ceEEEEeccCcccEEEEEEcCCCeEEEccCC------------------------
Confidence 77755555 456788888731 1222222113333455777788875555433
Q ss_pred hhhcccCCCCCCceEEEEEeCCCCeEEEEEECCCCCcccceeEEEEeC-CEEEEeecCCCeEEEeeCCCC
Q 018474 280 LISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFD-GNLYLASLQSNFIGILPLDGP 348 (355)
Q Consensus 280 ~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~-g~L~v~~~~~~~i~~~~~~~~ 348 (355)
+.|..+|..+++.+..+..+.+ .++.+.... ++|+.++. .+.|..+++.+.
T Consensus 205 -------------g~i~i~d~~~~~~~~~~~~~~~----~i~~~~~~~~~~l~~~~~-dg~v~iwd~~~~ 256 (313)
T 3odt_A 205 -------------GLIKLVDMHTGDVLRTYEGHES----FVYCIKLLPNGDIVSCGE-DRTVRIWSKENG 256 (313)
T ss_dssp -------------SEEEEEETTTCCEEEEEECCSS----CEEEEEECTTSCEEEEET-TSEEEEECTTTC
T ss_pred -------------CeEEEEECCchhhhhhhhcCCc----eEEEEEEecCCCEEEEec-CCEEEEEECCCC
Confidence 4577788756787777766554 355555543 55555544 667777776554
No 186
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.61 E-value=3.7e-05 Score=70.55 Aligned_cols=193 Identities=17% Similarity=0.169 Sum_probs=111.9
Q ss_pred EEEeeCCCeEEEEec-CC--EEEEEEcCCCeeEEeeccCC-CcccCeEECCCCC-EEEEeCCCcEEEEcC-CC-eEEEcC
Q 018474 57 VSVVVSKGALYTATR-DG--WVKYFILHNETLVNWKHIDS-QSLLGLTTTKDGG-VILCDNEKGLLKVTE-EG-VEAIVP 129 (355)
Q Consensus 57 i~~d~~~g~l~~~~~-~g--~i~~~~~~~g~~~~~~~~~~-~p~~gl~~d~~g~-L~v~~~~~gl~~~~~-~g-~~~~~~ 129 (355)
.++.|++..|+.... +| .|+.++..+++...+..... ... +.++.++|+ |+++.....++.++. ++ .+.+..
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~-~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~ 119 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTF-GGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQ 119 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSS-SCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCcc-ceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeee
Confidence 457766766666655 55 59999998888777654332 234 678999996 666665557888884 55 443322
Q ss_pred C-cCCcc--cEEEccCCcEEEEeCC--CCCC-Cccc--cccccccCCCCeEEEEeCCCCeEEEeeccccccccEEEeC-C
Q 018474 130 D-ASFTN--DVIAASDGTLYFTVAS--TKYT-PTDF--YKDMAEGKPYGQLRKYDPKLKETTVLHEGFYFANGIALSK-N 200 (355)
Q Consensus 130 ~-~~~~~--~l~~d~dG~ly~~d~~--~~~~-~~~~--~~~~~~~~~~g~l~~~dp~~~~~~~~~~~~~~pngi~~~~-d 200 (355)
. ..... ....+++|++.++... ..+. ...+ ....+.......|+.+|.++++.+.+.........++++| |
T Consensus 120 ~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~d 199 (388)
T 3pe7_A 120 VPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPYD 199 (388)
T ss_dssp CCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTE
T ss_pred chhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCccccccEECCCC
Confidence 1 12221 2345788876654211 0000 0000 0111223334689999999998877765544567889999 9
Q ss_pred CCEEEEEeCC-----CCeEEEEEeCCCCCcceeEecccCCC-CcCceEECCCCC-EEEEe
Q 018474 201 EDFVVVCESW-----KFRCRRYWLKGDRAGILDAFIENLPG-GPDNINLAPDGS-FWIGL 253 (355)
Q Consensus 201 g~~l~v~~~~-----~~~i~~~~~~~~~~~~~~~~~~~~~g-~p~~i~~d~~G~-lwv~~ 253 (355)
|+.+.++... ..+|+.++.++... +.+.....+ ......+++||+ |....
T Consensus 200 g~~l~~~~~~~~~~~~~~l~~~d~~~~~~---~~l~~~~~~~~~~~~~~spdg~~l~~~~ 256 (388)
T 3pe7_A 200 DSTVAFCHEGPHDLVDARMWLINEDGTNM---RKVKTHAEGESCTHEFWVPDGSALVYVS 256 (388)
T ss_dssp EEEEEEEECSCTTTSSCSEEEEETTSCCC---EESCCCCTTEEEEEEEECTTSSCEEEEE
T ss_pred CCEEEEEEecCCCCCcceEEEEeCCCCce---EEeeeCCCCcccccceECCCCCEEEEEe
Confidence 9877666543 34899998765322 222211111 122356888996 53333
No 187
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.59 E-value=3.4e-05 Score=72.79 Aligned_cols=150 Identities=11% Similarity=0.084 Sum_probs=96.5
Q ss_pred CCceEEEeeCCCeE-EEEecCCEEEEEEcC--CCeeEEee---ccCCCcccCeEECCCCCE-EEEeCCCcEEEEc-CCC-
Q 018474 53 HPEDVSVVVSKGAL-YTATRDGWVKYFILH--NETLVNWK---HIDSQSLLGLTTTKDGGV-ILCDNEKGLLKVT-EEG- 123 (355)
Q Consensus 53 ~p~~i~~d~~~g~l-~~~~~~g~i~~~~~~--~g~~~~~~---~~~~~p~~gl~~d~~g~L-~v~~~~~gl~~~~-~~g- 123 (355)
...++++.+++..| +++..+|.|..++.. +++..... .....+. +++++++|+. ++++..+.++.++ .++
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~-~~~~sp~~~~l~~~~~~g~v~~~~~~~~~ 182 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPN-AISIAEDDTTVIIADKFGDVYSIDINSIP 182 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEE-EEEECTTSSEEEEEETTSEEEEEETTSCC
T ss_pred ceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCce-EEEEcCCCCEEEEEeCCCcEEEEecCCcc
Confidence 46789999766665 556678999999987 66543332 2235577 8999999874 5555444566676 344
Q ss_pred -eE----EEcCCcCCcccEEEccC---CcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeE-EEee-ccccccc
Q 018474 124 -VE----AIVPDASFTNDVIAASD---GTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKET-TVLH-EGFYFAN 193 (355)
Q Consensus 124 -~~----~~~~~~~~~~~l~~d~d---G~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~-~~~~-~~~~~pn 193 (355)
.. .+......+.+++++++ |++.++.+. .+.+..||..+++. ..+. .......
T Consensus 183 ~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~-----------------d~~i~vwd~~~~~~~~~~~~~h~~~v~ 245 (450)
T 2vdu_B 183 EEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDR-----------------DEHIKISHYPQCFIVDKWLFGHKHFVS 245 (450)
T ss_dssp CSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEET-----------------TSCEEEEEESCTTCEEEECCCCSSCEE
T ss_pred cccccceeeecccCceEEEEEcCCCCCCcEEEEEcC-----------------CCcEEEEECCCCceeeeeecCCCCceE
Confidence 22 22222257888999999 866665433 45677777766643 2322 2223457
Q ss_pred cEEEeCCCCEEEEEeCCCCeEEEEEeCCC
Q 018474 194 GIALSKNEDFVVVCESWKFRCRRYWLKGD 222 (355)
Q Consensus 194 gi~~~~dg~~l~v~~~~~~~i~~~~~~~~ 222 (355)
.++++ |++.++.+. ..+.|..|++...
T Consensus 246 ~~~~s-d~~~l~s~~-~d~~v~vwd~~~~ 272 (450)
T 2vdu_B 246 SICCG-KDYLLLSAG-GDDKIFAWDWKTG 272 (450)
T ss_dssp EEEEC-STTEEEEEE-SSSEEEEEETTTC
T ss_pred EEEEC-CCCEEEEEe-CCCeEEEEECCCC
Confidence 88999 999666554 6678999998643
No 188
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.59 E-value=9.9e-05 Score=69.52 Aligned_cols=176 Identities=9% Similarity=-0.008 Sum_probs=103.0
Q ss_pred ceEEEeeCCCeEEEEecCCEEEEEEcCCCeeEEeec-cCCCcccCeEECCCCCEEEEeCCCcEEEEc-CCC--eEEEcCC
Q 018474 55 EDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKH-IDSQSLLGLTTTKDGGVILCDNEKGLLKVT-EEG--VEAIVPD 130 (355)
Q Consensus 55 ~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~~~-~~~~p~~gl~~d~~g~L~v~~~~~gl~~~~-~~g--~~~~~~~ 130 (355)
.++..+ ++.+++++.+|.|..+|..+++...... ..+.+. .+++.+++.|..+...+.+..++ .++ ...+...
T Consensus 126 ~~~~~~--~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~-~l~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~h 202 (464)
T 3v7d_B 126 TCLQFE--DNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVW-ALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGH 202 (464)
T ss_dssp EEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEE-EEEECSTTEEEEEETTSCEEEEETTTTEEEEEECCC
T ss_pred EEEEEC--CCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEE-EEEEcCCCEEEEEeCCCCEEEEECCCCcEEEEECCC
Confidence 355554 6788899999999999998887554332 234566 88888888666666555566666 456 4555444
Q ss_pred cCCcccEEEc--cCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEE-----------------------Ee
Q 018474 131 ASFTNDVIAA--SDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETT-----------------------VL 185 (355)
Q Consensus 131 ~~~~~~l~~d--~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~-----------------------~~ 185 (355)
...+..+.+. +++.+.++.+. .+.+..||..+++.. ..
T Consensus 203 ~~~v~~l~~~~~~~~~~l~s~s~-----------------d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (464)
T 3v7d_B 203 NSTVRCLDIVEYKNIKYIVTGSR-----------------DNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGV 265 (464)
T ss_dssp SSCEEEEEEEESSSCEEEEEEET-----------------TSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEE
T ss_pred CCccEEEEEecCCCCCEEEEEcC-----------------CCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEE
Confidence 4567777776 45655554332 345556665443311 00
Q ss_pred eccccccccEEEeCCCCEEEEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCCEEEEeec
Q 018474 186 HEGFYFANGIALSKNEDFVVVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIK 255 (355)
Q Consensus 186 ~~~~~~pngi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~ 255 (355)
.. .....-.+++++++.++.+. ..+.|..|++...+ ....+. ........+.++++|++.++...
T Consensus 266 ~~-~~~~~v~~~~~~~~~l~~~~-~d~~i~vwd~~~~~--~~~~~~-~~~~~v~~~~~~~~~~~l~sg~~ 330 (464)
T 3v7d_B 266 LR-GHMASVRTVSGHGNIVVSGS-YDNTLIVWDVAQMK--CLYILS-GHTDRIYSTIYDHERKRCISASM 330 (464)
T ss_dssp EC-CCSSCEEEEEEETTEEEEEE-TTSCEEEEETTTTE--EEEEEC-CCSSCEEEEEEETTTTEEEEEET
T ss_pred cc-CccceEEEEcCCCCEEEEEe-CCCeEEEEECCCCc--EEEEec-CCCCCEEEEEEcCCCCEEEEEeC
Confidence 11 11122345678888665554 56789999975321 122222 22233455678888886665544
No 189
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=98.59 E-value=1.4e-05 Score=71.65 Aligned_cols=214 Identities=10% Similarity=0.162 Sum_probs=132.3
Q ss_pred CCCeEEEEec--CCEEEEEEcCCCeeEEeeccCCCcccCeEECCCCCEEEEeCC--------------CcEEEEcCCC--
Q 018474 62 SKGALYTATR--DGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGGVILCDNE--------------KGLLKVTEEG-- 123 (355)
Q Consensus 62 ~~g~l~~~~~--~g~i~~~~~~~g~~~~~~~~~~~p~~gl~~d~~g~L~v~~~~--------------~gl~~~~~~g-- 123 (355)
+++.+|.... +++|++++......+++... .+. .|..+ ++.||.+... ..|++++.+|
T Consensus 24 ~g~~iy~~n~~d~~~ly~~~~dg~~~~~l~~~--~~~-~i~~~-g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~ 99 (302)
T 3s25_A 24 SDGEVFFSNTNDNGRLYAMNIDGSNIHKLSND--TAM-YINAD-KNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHG 99 (302)
T ss_dssp ETTEEEEEEGGGTTEEEEEETTSCSCEEEEEE--EEE-EEEEC-SSEEEEEEECC------CCSSCCSEEEEEEETTSCC
T ss_pred eCCEEEEEeCCCCceEEEEcCCCCCCEEccCC--cee-eEEEc-CCEEEEEECCCCcccccceeccCCCeEEEEeCCCCc
Confidence 4888998764 68899999844455554331 233 45554 4467766432 2488888655
Q ss_pred eEEEcCCcCCcccEEEccCC-cEEEEe-CCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeeccccccccEEEeCCC
Q 018474 124 VEAIVPDASFTNDVIAASDG-TLYFTV-ASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYFANGIALSKNE 201 (355)
Q Consensus 124 ~~~~~~~~~~~~~l~~d~dG-~ly~~d-~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~~~~pngi~~~~dg 201 (355)
.+.+.... +..+.++| .||+++ +. .....|++.+.++.+.+.+..... .++++++
T Consensus 100 ~~~l~~~~----~~~~s~~g~~Iy~~~~~~---------------~~~~~Iy~~~~dGs~~~~lt~~~~----~~~~~~g 156 (302)
T 3s25_A 100 STVLDPDP----CIYASLIGNYIYYLHYDT---------------QTATSLYRIRIDGEEKKKIKNHYL----FTCNTSD 156 (302)
T ss_dssp CEEEECSC----EEEEEEETTEEEEEEESS---------------SSCEEEEEEETTSCCCEEEESSCC----CCSEEET
T ss_pred ceEeecCC----ccEEEEeCCEEEEEeecC---------------CCCceEEEEECCCCCeEEEeCCCc----eEeeEEC
Confidence 55554432 12444444 899987 11 114579999988766666554422 4578999
Q ss_pred CEEEEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCC-CEEEEeecCCchhhHhhhcchhHHHHHHhccch
Q 018474 202 DFVVVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDG-SFWIGLIKMNQTGVRAIQKCREKWELLDAYPGL 280 (355)
Q Consensus 202 ~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G-~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (355)
+.|||++.+...|++.+++|.. .+.+.+. +....++++| .|+......
T Consensus 157 ~~iy~t~~g~~~Iy~~~l~g~~---~~~l~~~----~~~~~~~P~g~~iy~t~~~~------------------------ 205 (302)
T 3s25_A 157 RYFYYNNPKNGQLYRYDTASQS---EALFYDC----NCYKPVVLDDTNVYYMDVNR------------------------ 205 (302)
T ss_dssp TEEEEECTTTCCEEEEETTTTE---EEEEECS----CEEEEEEEETTEEEEEEGGG------------------------
T ss_pred CEEEEEeCCCceEEEEECCCCC---EEEEeCC----CccceeeecCCEEEEEEcCC------------------------
Confidence 9999999878899999987642 2223221 1223344444 455554331
Q ss_pred hhcccCCCCCCceEEEEEeCCCCeEEEEEECCCCCcccceeEEEEeCCEEEEe-ecCCCeEEEeeCCCCCCC
Q 018474 281 ISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFDGNLYLA-SLQSNFIGILPLDGPEPQ 351 (355)
Q Consensus 281 ~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~-~~~~~~i~~~~~~~~~~~ 351 (355)
. ..|.+.+. +|...+.+.+.. ...+...+++||.. ....+.|.++.+++...+
T Consensus 206 ----------~-~~I~~~~l-dG~~~~~Lt~~~------~~~~~~~g~~Iy~~~~~~~~~i~~~~~DG~~r~ 259 (302)
T 3s25_A 206 ----------D-NAIVHVNI-NNPNPVVLTEAN------IEHYNVYGSLIFYQRGGDNPALCVVKNDGTGFK 259 (302)
T ss_dssp ----------T-TEEEEECS-SSCCCEECSCSC------EEEEEEETTEEEEEECSSSCEEEEEETTSCCCE
T ss_pred ----------C-cEEEEEEC-CCCCeEEEeCCC------cceEEECCCEEEEEECCCCcEEEEEECCCCccE
Confidence 0 35888888 776666664421 12356678888886 445688999999887643
No 190
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=98.58 E-value=8.2e-05 Score=66.24 Aligned_cols=232 Identities=10% Similarity=0.025 Sum_probs=138.8
Q ss_pred CceEEEeeCCCeEEEEecCCEEEEEEcCCCeeEE-eeccCCCcccCeEECCCCCEEEEeCCCc-EEEEc-CCC---eEEE
Q 018474 54 PEDVSVVVSKGALYTATRDGWVKYFILHNETLVN-WKHIDSQSLLGLTTTKDGGVILCDNEKG-LLKVT-EEG---VEAI 127 (355)
Q Consensus 54 p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~-~~~~~~~p~~gl~~d~~g~L~v~~~~~g-l~~~~-~~g---~~~~ 127 (355)
-.++.+.+++..+.+++.++.|..+|..+++... +......+. ++++.+++.++++...++ +..++ .++ .+.+
T Consensus 58 v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~ 136 (304)
T 2ynn_A 58 VRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIR-SIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTF 136 (304)
T ss_dssp EEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE-EEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEE
T ss_pred EEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEE-EEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhh
Confidence 4567788777888889999999999998876543 332334567 899999998766555555 44445 344 3334
Q ss_pred cCCcCCcccEEEcc-CCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEE-Eeecc-ccccccEEEeC--CCC
Q 018474 128 VPDASFTNDVIAAS-DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETT-VLHEG-FYFANGIALSK--NED 202 (355)
Q Consensus 128 ~~~~~~~~~l~~d~-dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~-~~~~~-~~~pngi~~~~--dg~ 202 (355)
......+..++++| ++.+.++.+. .+.+..||..+++.. .+..+ ....+.+++++ +++
T Consensus 137 ~~h~~~v~~v~~~p~~~~~l~sgs~-----------------D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 199 (304)
T 2ynn_A 137 EGHEHFVMCVAFNPKDPSTFASGCL-----------------DRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKP 199 (304)
T ss_dssp CCCCSCEEEEEECTTCTTEEEEEET-----------------TSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCC
T ss_pred cccCCcEEEEEECCCCCCEEEEEeC-----------------CCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCC
Confidence 44446788999998 5666665433 456777886544321 11111 12234456665 666
Q ss_pred EEEEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCCEEEEeecCCchhhHhhhcchhHHHHHHhccchhh
Q 018474 203 FVVVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLIS 282 (355)
Q Consensus 203 ~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (355)
++++....+.|..|+++... ....+. ........+.+.+++.+.++....
T Consensus 200 -~l~s~s~D~~i~iWd~~~~~--~~~~~~-~h~~~v~~~~~~p~~~~l~s~s~D-------------------------- 249 (304)
T 2ynn_A 200 -YMITASDDLTIKIWDYQTKS--CVATLE-GHMSNVSFAVFHPTLPIIISGSED-------------------------- 249 (304)
T ss_dssp -EEEEEETTSEEEEEETTTTE--EEEEEE-CCSSCEEEEEECSSSSEEEEEETT--------------------------
T ss_pred -EEEEEcCCCeEEEEeCCCCc--cceeeC-CCCCCEEEEEECCCCCEEEEEcCC--------------------------
Confidence 44555567889899875421 112221 222223446788888877665442
Q ss_pred cccCCCCCCceEEEEEeCCCCeEEEEEECCCCCcccceeEEEEe--CCEEEEeecCCCeEEEeeCCC
Q 018474 283 LLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF--DGNLYLASLQSNFIGILPLDG 347 (355)
Q Consensus 283 ~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~--~g~L~v~~~~~~~i~~~~~~~ 347 (355)
+.|..+|.++++....+....+ .+..+... ++..|+.+-..+.+..+.+..
T Consensus 250 ----------g~i~iWd~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~asg~~~g~~~~~~~~ 302 (304)
T 2ynn_A 250 ----------GTLKIWNSSTYKVEKTLNVGLE----RSWCIATHPTGRKNYIASGFDNGFTVLSLGN 302 (304)
T ss_dssp ----------SCEEEEETTTCCEEEEECCSSS----SEEEEEECTTCGGGCEEEEETTEEEEEECC-
T ss_pred ----------CeEEEEECCCCceeeeccCCCc----cEEEEEECCCCCceEEEEecCCceEEEEecc
Confidence 3477778767787777755333 33344433 334444444577777776654
No 191
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=98.58 E-value=0.0001 Score=68.19 Aligned_cols=182 Identities=11% Similarity=0.014 Sum_probs=111.4
Q ss_pred CCCceEEEeeCCCeEEEEecCCEEEEEEcCCCeeEEeeccC-------------------CCcccCeEECCCCCEEEEeC
Q 018474 52 NHPEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHID-------------------SQSLLGLTTTKDGGVILCDN 112 (355)
Q Consensus 52 ~~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~~~~~-------------------~~p~~gl~~d~~g~L~v~~~ 112 (355)
..-.++++.+++..|.++. ++.+..++..+++........ ..+. ++++.++|+++++..
T Consensus 65 ~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~-~v~~s~dg~~l~s~~ 142 (393)
T 1erj_A 65 SVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIR-SVCFSPDGKFLATGA 142 (393)
T ss_dssp SCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEE-EEEECTTSSEEEEEE
T ss_pred CEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEE-EEEECCCCCEEEEEc
Confidence 3456888986555555544 677888888777654322110 0145 788999998766554
Q ss_pred CCc-EEEEc-CCC--eEEEcCCcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeecc
Q 018474 113 EKG-LLKVT-EEG--VEAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEG 188 (355)
Q Consensus 113 ~~g-l~~~~-~~g--~~~~~~~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~ 188 (355)
.++ +..++ .++ +..+......+.++++.++|...++.+. .+.+..||..+++.......
T Consensus 143 ~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~-----------------d~~v~iwd~~~~~~~~~~~~ 205 (393)
T 1erj_A 143 EDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSG-----------------DRTVRIWDLRTGQCSLTLSI 205 (393)
T ss_dssp TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET-----------------TSEEEEEETTTTEEEEEEEC
T ss_pred CCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecC-----------------CCcEEEEECCCCeeEEEEEc
Confidence 555 44556 355 4445444467889999999976665433 56788899888775443333
Q ss_pred ccccccEEEeC-CCCEEEEEeCCCCeEEEEEeCCCCCcceeEec------ccCCCCcCceEECCCCCEEEEeec
Q 018474 189 FYFANGIALSK-NEDFVVVCESWKFRCRRYWLKGDRAGILDAFI------ENLPGGPDNINLAPDGSFWIGLIK 255 (355)
Q Consensus 189 ~~~pngi~~~~-dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~------~~~~g~p~~i~~d~~G~lwv~~~~ 255 (355)
......++++| |++.+ ++....+.|..|+++.... ...+. .........+.++++|++.++...
T Consensus 206 ~~~v~~~~~~~~~~~~l-~~~s~d~~v~iwd~~~~~~--~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~ 276 (393)
T 1erj_A 206 EDGVTTVAVSPGDGKYI-AAGSLDRAVRVWDSETGFL--VERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSL 276 (393)
T ss_dssp SSCEEEEEECSTTCCEE-EEEETTSCEEEEETTTCCE--EEEEC------CCCSSCEEEEEECTTSSEEEEEET
T ss_pred CCCcEEEEEECCCCCEE-EEEcCCCcEEEEECCCCcE--EEeecccccCCCCCCCCEEEEEECCCCCEEEEEeC
Confidence 33456788998 77744 4445667888888754321 11111 011122345778889987766554
No 192
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=98.58 E-value=8e-05 Score=67.62 Aligned_cols=182 Identities=9% Similarity=0.020 Sum_probs=110.8
Q ss_pred CceEEEeeCCCeEEEEecCCEEEEEEcCCCeeEE--ee-c-cCCCcccCeEECCCCCEEEEeCCCc-EEEEc-CCC----
Q 018474 54 PEDVSVVVSKGALYTATRDGWVKYFILHNETLVN--WK-H-IDSQSLLGLTTTKDGGVILCDNEKG-LLKVT-EEG---- 123 (355)
Q Consensus 54 p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~--~~-~-~~~~p~~gl~~d~~g~L~v~~~~~g-l~~~~-~~g---- 123 (355)
-.++++.|++..|.++..++.|..++..+++... .. . ...... ++++.++|+++++...++ +..++ ..+
T Consensus 19 v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~-~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~ 97 (345)
T 3fm0_A 19 CWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVR-KVAWSPCGNYLASASFDATTCIWKKNQDDFEC 97 (345)
T ss_dssp EEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEE-EEEECTTSSEEEEEETTSCEEEEEECCC-EEE
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEE-EEEECCCCCEEEEEECCCcEEEEEccCCCeEE
Confidence 3478899777778888899999999987765331 11 1 123466 899999998666554444 43444 233
Q ss_pred eEEEcCCcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCe-EE---EeeccccccccEEEeC
Q 018474 124 VEAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKE-TT---VLHEGFYFANGIALSK 199 (355)
Q Consensus 124 ~~~~~~~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~-~~---~~~~~~~~pngi~~~~ 199 (355)
+..+......+++++++|+|++.++.+. .+.+..||..+++ .. .+.........++++|
T Consensus 98 ~~~~~~h~~~v~~v~~sp~~~~l~s~s~-----------------D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p 160 (345)
T 3fm0_A 98 VTTLEGHENEVKSVAWAPSGNLLATCSR-----------------DKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHP 160 (345)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEET-----------------TSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECS
T ss_pred EEEccCCCCCceEEEEeCCCCEEEEEEC-----------------CCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECC
Confidence 2334333467899999999987776443 4456667654442 21 2222223346789999
Q ss_pred CCCEEEEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCCEEEEeec
Q 018474 200 NEDFVVVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIK 255 (355)
Q Consensus 200 dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~ 255 (355)
+++.+.. ....+.|..|+.+.........+. ...+....+.++++|++.++...
T Consensus 161 ~~~~l~s-~s~d~~i~~w~~~~~~~~~~~~~~-~h~~~v~~l~~sp~g~~l~s~s~ 214 (345)
T 3fm0_A 161 SQELLAS-ASYDDTVKLYREEEDDWVCCATLE-GHESTVWSLAFDPSGQRLASCSD 214 (345)
T ss_dssp SSSCEEE-EETTSCEEEEEEETTEEEEEEEEC-CCSSCEEEEEECTTSSEEEEEET
T ss_pred CCCEEEE-EeCCCcEEEEEecCCCEEEEEEec-CCCCceEEEEECCCCCEEEEEeC
Confidence 9985544 445677888887432111111121 22233456788999987776654
No 193
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.57 E-value=2.4e-05 Score=78.11 Aligned_cols=179 Identities=12% Similarity=0.113 Sum_probs=110.7
Q ss_pred CceEEEeeCCCeEEEEe---------------------------------cCCEEEEEEcCCCeeEEeecc---CCCccc
Q 018474 54 PEDVSVVVSKGALYTAT---------------------------------RDGWVKYFILHNETLVNWKHI---DSQSLL 97 (355)
Q Consensus 54 p~~i~~d~~~g~l~~~~---------------------------------~~g~i~~~~~~~g~~~~~~~~---~~~p~~ 97 (355)
+.++.+.|++..|+++. .+..|+.+|..+++....... ...+.
T Consensus 183 ~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~- 261 (706)
T 2z3z_A 183 EKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLT- 261 (706)
T ss_dssp CCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEE-
T ss_pred CceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEe-
Confidence 57899997777777765 335788999988876654322 12355
Q ss_pred CeEECCCCC-EEEEeCCC-----cEEEEc-CCC--eEEEcCC--c---CCcccEEEcc--CCcEEEEeCCCCCCCccccc
Q 018474 98 GLTTTKDGG-VILCDNEK-----GLLKVT-EEG--VEAIVPD--A---SFTNDVIAAS--DGTLYFTVASTKYTPTDFYK 161 (355)
Q Consensus 98 gl~~d~~g~-L~v~~~~~-----gl~~~~-~~g--~~~~~~~--~---~~~~~l~~d~--dG~ly~~d~~~~~~~~~~~~ 161 (355)
.+++.++|+ |+++.... .++.++ .+| .+.+... . ..++++++++ ||+++++...
T Consensus 262 ~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~---------- 331 (706)
T 2z3z_A 262 NLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRR---------- 331 (706)
T ss_dssp EEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECT----------
T ss_pred eEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEcc----------
Confidence 788999997 66644332 467777 355 3333211 1 2246789999 9975554322
Q ss_pred cccccCCCCeEEEEeCCCCeEEEeecccccccc-EEEeCCCCEEEEEeCCCC----eEEEEEeCCCCCcceeEecccCCC
Q 018474 162 DMAEGKPYGQLRKYDPKLKETTVLHEGFYFANG-IALSKNEDFVVVCESWKF----RCRRYWLKGDRAGILDAFIENLPG 236 (355)
Q Consensus 162 ~~~~~~~~g~l~~~dp~~~~~~~~~~~~~~png-i~~~~dg~~l~v~~~~~~----~i~~~~~~~~~~~~~~~~~~~~~g 236 (355)
.....++.++.+++..+.+..+...... ++++||++.++++....+ .|++++.++.. .+.+. . ..
T Consensus 332 -----~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~---~~~l~-~-~~ 401 (706)
T 2z3z_A 332 -----DGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK---TKDLT-P-ES 401 (706)
T ss_dssp -----TSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC---CEESC-C-SS
T ss_pred -----CCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC---ceecc-C-CC
Confidence 1134789999766666655443222233 789999999998877654 78888875432 22221 1 11
Q ss_pred CcCceEECCCCCEEEEe
Q 018474 237 GPDNINLAPDGSFWIGL 253 (355)
Q Consensus 237 ~p~~i~~d~~G~lwv~~ 253 (355)
....+.++++|+.++..
T Consensus 402 ~~~~~~~spdg~~l~~~ 418 (706)
T 2z3z_A 402 GMHRTQLSPDGSAIIDI 418 (706)
T ss_dssp SEEEEEECTTSSEEEEE
T ss_pred ceEEEEECCCCCEEEEE
Confidence 23456788888765544
No 194
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.57 E-value=2.7e-05 Score=73.09 Aligned_cols=185 Identities=12% Similarity=0.093 Sum_probs=114.0
Q ss_pred CCCCceEEEeeCC-CeEEEEecCCEEEEEEcCC----------Ce-eEEeeccCCCcccCeEECCCCC-EEEEeCCCc-E
Q 018474 51 VNHPEDVSVVVSK-GALYTATRDGWVKYFILHN----------ET-LVNWKHIDSQSLLGLTTTKDGG-VILCDNEKG-L 116 (355)
Q Consensus 51 ~~~p~~i~~d~~~-g~l~~~~~~g~i~~~~~~~----------g~-~~~~~~~~~~p~~gl~~d~~g~-L~v~~~~~g-l 116 (355)
...+.++++.+.+ ..+++++.+|.|..++..+ .+ ...+......+. ++++++++. ++++....| +
T Consensus 128 ~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~-~l~~~~~~~~~l~s~~~dg~i 206 (430)
T 2xyi_A 128 EGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGY-GLSWNPNLNGYLLSASDDHTI 206 (430)
T ss_dssp SSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCC-CEEECTTSTTEEEEECTTSCE
T ss_pred CCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeE-EEEeCCCCCCeEEEEeCCCeE
Confidence 3568899999643 4566677789999999754 11 222222334577 999998876 555544444 5
Q ss_pred EEEc-CCC-----e----EEEcCCcCCcccEEEcc-CCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCe----
Q 018474 117 LKVT-EEG-----V----EAIVPDASFTNDVIAAS-DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKE---- 181 (355)
Q Consensus 117 ~~~~-~~g-----~----~~~~~~~~~~~~l~~d~-dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~---- 181 (355)
..++ ..+ . ..+......++++++++ ++.++++... .+.+..||..++.
T Consensus 207 ~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~-----------------dg~i~i~d~~~~~~~~~ 269 (430)
T 2xyi_A 207 CLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVAD-----------------DQKLMIWDTRNNNTSKP 269 (430)
T ss_dssp EEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEET-----------------TSEEEEEETTCSCSSSC
T ss_pred EEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeC-----------------CCeEEEEECCCCCCCcc
Confidence 5555 231 1 11222225688899998 5577776543 5678888886552
Q ss_pred EEEeeccccccccEEEeCCCCEEEEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCC-EEEEeec
Q 018474 182 TTVLHEGFYFANGIALSKNEDFVVVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGS-FWIGLIK 255 (355)
Q Consensus 182 ~~~~~~~~~~pngi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~-lwv~~~~ 255 (355)
...+......++.++++|+++.++++....+.|..|+++.... ....+. ...+....+.+.++|. ++++...
T Consensus 270 ~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~-~~~~~~-~h~~~v~~i~~sp~~~~~l~s~~~ 342 (430)
T 2xyi_A 270 SHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL-KLHSFE-SHKDEIFQVQWSPHNETILASSGT 342 (430)
T ss_dssp SEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTS-CSEEEE-CCSSCEEEEEECSSCTTEEEEEET
T ss_pred eeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCC-CeEEee-cCCCCEEEEEECCCCCCEEEEEeC
Confidence 2222223345678999999987777777788999999864221 122222 2233345678888885 5555543
No 195
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.56 E-value=3.8e-06 Score=81.23 Aligned_cols=185 Identities=9% Similarity=-0.028 Sum_probs=119.0
Q ss_pred CCCCceEEEe--eCCCeEEEEe------------------cCCEEEEEEcCCCeeEEeeccCCCcccCeEECCCCC-EEE
Q 018474 51 VNHPEDVSVV--VSKGALYTAT------------------RDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGG-VIL 109 (355)
Q Consensus 51 ~~~p~~i~~d--~~~g~l~~~~------------------~~g~i~~~~~~~g~~~~~~~~~~~p~~gl~~d~~g~-L~v 109 (355)
..+|+++++. |+++.+|+++ .++.+..+|.++.+...-...+++|. +++++++|+ +|+
T Consensus 133 g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg~pd-~~~~spdGk~~~v 211 (595)
T 1fwx_A 133 AKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSGNLD-NCDADYEGKWAFS 211 (595)
T ss_dssp CCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESSCCC-CEEECSSSSEEEE
T ss_pred CCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEeCCCcc-ceEECCCCCEEEE
Confidence 4789999984 6799999985 23567888988776554444455899 999999886 666
Q ss_pred EeCCC--------------------------------------cEEEEc-CC--C-e-E-EEcCCcCCcccEEEccCC-c
Q 018474 110 CDNEK--------------------------------------GLLKVT-EE--G-V-E-AIVPDASFTNDVIAASDG-T 144 (355)
Q Consensus 110 ~~~~~--------------------------------------gl~~~~-~~--g-~-~-~~~~~~~~~~~l~~d~dG-~ 144 (355)
+.... ++-.+| .+ + . . .+.. ...|.++.++||| .
T Consensus 212 t~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~ 290 (595)
T 1fwx_A 212 TSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKH 290 (595)
T ss_dssp EESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSE
T ss_pred EecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCE
Confidence 65332 234444 22 2 1 1 1211 1689999999999 5
Q ss_pred EEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCe------------EEEeeccccccccEEEeCCCCEEEEEeCCCC
Q 018474 145 LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKE------------TTVLHEGFYFANGIALSKNEDFVVVCESWKF 212 (355)
Q Consensus 145 ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~------------~~~~~~~~~~pngi~~~~dg~~l~v~~~~~~ 212 (355)
+|+++.. ...+..||.++.+ +.........|.+++|++|| .+|++....+
T Consensus 291 v~V~~~~-----------------s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG-~aY~t~~lds 352 (595)
T 1fwx_A 291 LCVAGKL-----------------SPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRG-NAYTSLFLDS 352 (595)
T ss_dssp EEEECTT-----------------SSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTS-EEEEEETTTT
T ss_pred EEEeCCC-----------------CCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCC-eEEEEEecCC
Confidence 8887654 4467777765431 22222334579999999999 7999999999
Q ss_pred eEEEEEeCC-------CCCcc-eeEeccc-CCC---CcCceEECCCCCEEEEeec
Q 018474 213 RCRRYWLKG-------DRAGI-LDAFIEN-LPG---GPDNINLAPDGSFWIGLIK 255 (355)
Q Consensus 213 ~i~~~~~~~-------~~~~~-~~~~~~~-~~g---~p~~i~~d~~G~lwv~~~~ 255 (355)
.|.+|+++. .+..+ ...+... .|| .+-++..++||++.++.+.
T Consensus 353 qV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk 407 (595)
T 1fwx_A 353 QVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSK 407 (595)
T ss_dssp EEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEES
T ss_pred cEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCC
Confidence 999999854 11111 1111111 111 1134567888987666655
No 196
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.56 E-value=3.6e-06 Score=77.38 Aligned_cols=155 Identities=8% Similarity=-0.085 Sum_probs=96.5
Q ss_pred eEEEeeCCCeEEEEecCCEEEEEEcCCCeeEEeeccCCC-cc-cCeEECCCCCEEEEe----------------------
Q 018474 56 DVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHIDSQ-SL-LGLTTTKDGGVILCD---------------------- 111 (355)
Q Consensus 56 ~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~~~~~~~-p~-~gl~~d~~g~L~v~~---------------------- 111 (355)
++++.|++..|+....++.|+.+|..+++...+...... .. .....+++|+++++.
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (388)
T 3pe7_A 85 GGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFT 164 (388)
T ss_dssp SCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGG
T ss_pred ceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhcc
Confidence 568887777888888888999999988876654432211 11 012347888877642
Q ss_pred -CCCcEEEEc-CCC-eEEEcCCcCCcccEEEcc-CCc-EEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEee
Q 018474 112 -NEKGLLKVT-EEG-VEAIVPDASFTNDVIAAS-DGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH 186 (355)
Q Consensus 112 -~~~gl~~~~-~~g-~~~~~~~~~~~~~l~~d~-dG~-ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~ 186 (355)
....|+.++ .+| .+.+......+.++.++| ||+ |.++..... ......|+.+|.++++.+.+.
T Consensus 165 ~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~------------~~~~~~l~~~d~~~~~~~~l~ 232 (388)
T 3pe7_A 165 KPCCRLMRVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPH------------DLVDARMWLINEDGTNMRKVK 232 (388)
T ss_dssp CCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCT------------TTSSCSEEEEETTSCCCEESC
T ss_pred CCcceEEEEECCCCceEEeecCCccccccEECCCCCCEEEEEEecCC------------CCCcceEEEEeCCCCceEEee
Confidence 113588888 466 665554435678899999 884 544432200 011347899998777666554
Q ss_pred ccc--cccccEEEeCCCCEEEE-EeCCCC---eEEEEEeCCC
Q 018474 187 EGF--YFANGIALSKNEDFVVV-CESWKF---RCRRYWLKGD 222 (355)
Q Consensus 187 ~~~--~~pngi~~~~dg~~l~v-~~~~~~---~i~~~~~~~~ 222 (355)
... ......+++|||+.+++ +..... .|+++++++.
T Consensus 233 ~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g 274 (388)
T 3pe7_A 233 THAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETL 274 (388)
T ss_dssp CCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTC
T ss_pred eCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCC
Confidence 332 12335689999996644 443222 3888988654
No 197
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.56 E-value=1.5e-05 Score=78.90 Aligned_cols=179 Identities=11% Similarity=-0.007 Sum_probs=104.5
Q ss_pred eCCCe-EEEEe-cCCEEEEEEcC--C-CeeEEeecc-----CCCcccCeEECCCCC-EEEEeCC----------CcEEEE
Q 018474 61 VSKGA-LYTAT-RDGWVKYFILH--N-ETLVNWKHI-----DSQSLLGLTTTKDGG-VILCDNE----------KGLLKV 119 (355)
Q Consensus 61 ~~~g~-l~~~~-~~g~i~~~~~~--~-g~~~~~~~~-----~~~p~~gl~~d~~g~-L~v~~~~----------~gl~~~ 119 (355)
|+++. ++.+. .+..|+.++.. + ++...+... ..... ++++.+||+ |+++... ..|+.+
T Consensus 88 PDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~-~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~ 166 (662)
T 3azo_A 88 PAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWA-DPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAV 166 (662)
T ss_dssp SSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEE-EEEEETTTTEEEEEEEEECSSSTTCEEEEEEEE
T ss_pred cCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCcccc-CcEECCCCCEEEEEEecccCCCCCCceeEEEEE
Confidence 55666 55544 36789999875 3 665555431 23455 788899997 4444322 247888
Q ss_pred c-CC------C-eEEEc-CCcCCcccEEEccCCc-EEEEeCCCCCCCccccccccccCCCCeEEEEeCC-CC---eEEEe
Q 018474 120 T-EE------G-VEAIV-PDASFTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPK-LK---ETTVL 185 (355)
Q Consensus 120 ~-~~------g-~~~~~-~~~~~~~~l~~d~dG~-ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~-~~---~~~~~ 185 (355)
+ .+ + .+.+. .......+++++|||+ |+++..... ...+ ....|+.+|.+ ++ +.+.+
T Consensus 167 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~-------~~~~---~~~~i~~~d~~~~g~~~~~~~l 236 (662)
T 3azo_A 167 PLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHP-------RMPW---EGTELKTARVTEDGRFADTRTL 236 (662)
T ss_dssp ETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTT-------CCTT---TCEEEEEEEECTTSCEEEEEEE
T ss_pred ECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCC-------CCCC---CCcEEEEEEECCCCcccccEEe
Confidence 8 46 7 66665 4445677889999995 655542210 0000 12468888887 46 55555
Q ss_pred ecc-ccccccEEEeCCCCEEEEEeCCCC--eEEEEEeCCCCCcceeEecccCCC------C--cCceEECCCCCEEEEee
Q 018474 186 HEG-FYFANGIALSKNEDFVVVCESWKF--RCRRYWLKGDRAGILDAFIENLPG------G--PDNINLAPDGSFWIGLI 254 (355)
Q Consensus 186 ~~~-~~~pngi~~~~dg~~l~v~~~~~~--~i~~~~~~~~~~~~~~~~~~~~~g------~--p~~i~~d~~G~lwv~~~ 254 (355)
..+ ......++++|||+ +|++....+ .|+++++++.. .+.+...... . ...+.+.++|++++...
T Consensus 237 ~~~~~~~~~~~~~spdg~-l~~~~~~~~~~~l~~~~~~~~~---~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~ 312 (662)
T 3azo_A 237 LGGPEEAIAQAEWAPDGS-LIVATDRTGWWNLHRVDPATGA---ATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHG 312 (662)
T ss_dssp EEETTBCEEEEEECTTSC-EEEEECTTSSCEEEEECTTTCC---EEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEB
T ss_pred CCCCCceEcceEECCCCe-EEEEECCCCCeEEEEEECCCCc---eeecccccccccCccccccCceEeEeCCCEEEEEEE
Confidence 443 34456789999999 555554444 78888864432 2222111100 0 23466767788776654
No 198
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=98.56 E-value=5.2e-05 Score=69.61 Aligned_cols=245 Identities=12% Similarity=0.012 Sum_probs=139.4
Q ss_pred ecCCCCCCCceEEEeeCCCeEEEEecCCEEEEEEcCCCe-------eEEeeccCCCcccCeEECCC----C---CEEEE-
Q 018474 46 LGEGCVNHPEDVSVVVSKGALYTATRDGWVKYFILHNET-------LVNWKHIDSQSLLGLTTTKD----G---GVILC- 110 (355)
Q Consensus 46 ~~~~~~~~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~-------~~~~~~~~~~p~~gl~~d~~----g---~L~v~- 110 (355)
...+.-..-.++++++ +.|++++.+|.|..++..+++ ...+......+. .+++.++ | +++++
T Consensus 11 ~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~~g~~~~~l~s~ 87 (397)
T 1sq9_A 11 AGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLH-HVDVLQAIERDAFELCLVATT 87 (397)
T ss_dssp ESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEE-EEEEEEEEETTTEEEEEEEEE
T ss_pred hhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEE-EEEEecccccCCccccEEEEE
Confidence 3344445667888883 788889999999999987765 444433334466 8888887 7 65554
Q ss_pred eCCCcEEEEc-CCC-------eEEEcCC-----cCCcccEEEc----cCCcE-EEEeCCCCCCCccccccccccCCCCeE
Q 018474 111 DNEKGLLKVT-EEG-------VEAIVPD-----ASFTNDVIAA----SDGTL-YFTVASTKYTPTDFYKDMAEGKPYGQL 172 (355)
Q Consensus 111 ~~~~gl~~~~-~~g-------~~~~~~~-----~~~~~~l~~d----~dG~l-y~~d~~~~~~~~~~~~~~~~~~~~g~l 172 (355)
...+.+..++ .++ ...+... ...+.++++. ++|.. +++.+. .+.+
T Consensus 88 ~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~-----------------dg~i 150 (397)
T 1sq9_A 88 SFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDV-----------------KGTT 150 (397)
T ss_dssp ETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEET-----------------TSCE
T ss_pred cCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeC-----------------CCcE
Confidence 4334455555 222 2223322 2567889999 88876 554322 3456
Q ss_pred EEEeCCC------C-eEE-----Eee-------ccccccccEEEeCCCCEEEEEeCCCCeEEEEEeCCCCCcceeEeccc
Q 018474 173 RKYDPKL------K-ETT-----VLH-------EGFYFANGIALSKNEDFVVVCESWKFRCRRYWLKGDRAGILDAFIEN 233 (355)
Q Consensus 173 ~~~dp~~------~-~~~-----~~~-------~~~~~pngi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~ 233 (355)
..||..+ + ... .+. ........+++++++ ++++....+.|..|+++... ....+. .
T Consensus 151 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~i~i~d~~~~~--~~~~~~-~ 225 (397)
T 1sq9_A 151 YIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTVQISELSTLR--PLYNFE-S 225 (397)
T ss_dssp EEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTTSEEEEEETTTTE--EEEEEE-C
T ss_pred EEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc--eEEEEeCCCcEEEEECCCCc--eeEEEe-c
Confidence 6666544 2 111 221 123346789999999 44555567889999985421 122222 2
Q ss_pred ---C---CCCcCceEECCCCCEEEEeecCCchhhHhhhcchhHHHHHHhccchhhcccCCCCCCceEEEEEeCCCCeEEE
Q 018474 234 ---L---PGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIR 307 (355)
Q Consensus 234 ---~---~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~ 307 (355)
. ......+.++++|+++++.... ...+.|..+|..+++.+.
T Consensus 226 ~~~h~~~~~~i~~i~~~~~~~~l~~~~~d---------------------------------~~~g~i~i~d~~~~~~~~ 272 (397)
T 1sq9_A 226 QHSMINNSNSIRSVKFSPQGSLLAIAHDS---------------------------------NSFGCITLYETEFGERIG 272 (397)
T ss_dssp CC---CCCCCEEEEEECSSTTEEEEEEEE---------------------------------TTEEEEEEEETTTCCEEE
T ss_pred cccccccCCccceEEECCCCCEEEEEecC---------------------------------CCCceEEEEECCCCcccc
Confidence 2 3334567888889876655431 111467778865777777
Q ss_pred EEECCCC---------CcccceeEEEEe-CCEEEEeecCCCeEEEeeCCCC
Q 018474 308 DFNDPDA---------TYISFVTSAAEF-DGNLYLASLQSNFIGILPLDGP 348 (355)
Q Consensus 308 ~~~~~~g---------~~~~~~~~~~~~-~g~L~v~~~~~~~i~~~~~~~~ 348 (355)
.+..+.- .....+..+... ++++++.....+.|..+++.+.
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 323 (397)
T 1sq9_A 273 SLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTK 323 (397)
T ss_dssp EECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTT
T ss_pred eeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 7755100 012245555554 3444444344777888877653
No 199
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=98.56 E-value=9.4e-05 Score=73.85 Aligned_cols=184 Identities=10% Similarity=0.080 Sum_probs=114.7
Q ss_pred CCCCCCceEEEeeCCCeEEEEecCCEEEEEEcCCCeeEE-eeccCCCcccCeEECCCCCEEEEeCCCcEE-EEcCCC--e
Q 018474 49 GCVNHPEDVSVVVSKGALYTATRDGWVKYFILHNETLVN-WKHIDSQSLLGLTTTKDGGVILCDNEKGLL-KVTEEG--V 124 (355)
Q Consensus 49 ~~~~~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~-~~~~~~~p~~gl~~d~~g~L~v~~~~~gl~-~~~~~g--~ 124 (355)
+.-..-.++++.+++..|.+++.+|.|..+|..+++... +......+. ++++.++|+.+++...++.+ .++..+ .
T Consensus 428 ~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~-~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~ 506 (694)
T 3dm0_A 428 GHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVL-SVAFSLDNRQIVSASRDRTIKLWNTLGECK 506 (694)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEE-EEEECTTSSCEEEEETTSCEEEECTTSCEE
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEE-EEEEeCCCCEEEEEeCCCEEEEEECCCCcc
Confidence 334456688888777778888899999999998886543 322334567 89999998766554455544 445433 3
Q ss_pred EEEcCC----cCCcccEEEccCC--cEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeecc-ccccccEEE
Q 018474 125 EAIVPD----ASFTNDVIAASDG--TLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEG-FYFANGIAL 197 (355)
Q Consensus 125 ~~~~~~----~~~~~~l~~d~dG--~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~-~~~pngi~~ 197 (355)
..+... ...+.++++++++ .+.++.+. .+.+..||..+++......+ ......+++
T Consensus 507 ~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~-----------------d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~ 569 (694)
T 3dm0_A 507 YTISEGGEGHRDWVSCVRFSPNTLQPTIVSASW-----------------DKTVKVWNLSNCKLRSTLAGHTGYVSTVAV 569 (694)
T ss_dssp EEECSSTTSCSSCEEEEEECSCSSSCEEEEEET-----------------TSCEEEEETTTCCEEEEECCCSSCEEEEEE
T ss_pred eeeccCCCCCCCcEEEEEEeCCCCcceEEEEeC-----------------CCeEEEEECCCCcEEEEEcCCCCCEEEEEE
Confidence 333221 1557888888876 34444322 45788888877765433332 234567999
Q ss_pred eCCCCEEEEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCCEEEEeec
Q 018474 198 SKNEDFVVVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIK 255 (355)
Q Consensus 198 ~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~ 255 (355)
+||++.+ ++....+.|..|++...+ ....+ ........+.++++|.+.++...
T Consensus 570 spdg~~l-~sg~~Dg~i~iwd~~~~~--~~~~~--~~~~~v~~~~~sp~~~~l~~~~~ 622 (694)
T 3dm0_A 570 SPDGSLC-ASGGKDGVVLLWDLAEGK--KLYSL--EANSVIHALCFSPNRYWLCAATE 622 (694)
T ss_dssp CTTSSEE-EEEETTSBCEEEETTTTE--EEECC--BCSSCEEEEEECSSSSEEEEEET
T ss_pred eCCCCEE-EEEeCCCeEEEEECCCCc--eEEEe--cCCCcEEEEEEcCCCcEEEEEcC
Confidence 9999954 455567788889875321 11111 11223455778888877766544
No 200
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=98.56 E-value=0.00032 Score=63.93 Aligned_cols=186 Identities=11% Similarity=0.089 Sum_probs=116.2
Q ss_pred CCCCCCCceEEEeeCCCeEEEEecCCEEEEEEcCCCeeEEe-eccCCCcccCeEECCCCCEEEEeCCCcEEEEc--C-C-
Q 018474 48 EGCVNHPEDVSVVVSKGALYTATRDGWVKYFILHNETLVNW-KHIDSQSLLGLTTTKDGGVILCDNEKGLLKVT--E-E- 122 (355)
Q Consensus 48 ~~~~~~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~-~~~~~~p~~gl~~d~~g~L~v~~~~~gl~~~~--~-~- 122 (355)
.|.-..-.++++.+++..|..++.||.|..+|..+++.... ........ .+++.++|.++++...++.+++. . .
T Consensus 61 ~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~-~~~~sp~g~~lasg~~d~~i~v~~~~~~~ 139 (354)
T 2pbi_B 61 KGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVM-ACAYAPSGCAIACGGLDNKCSVYPLTFDK 139 (354)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCC-EEEECTTSSEEEEESTTSEEEEEECCCCT
T ss_pred cCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEE-EEEECCCCCEEEEeeCCCCEEEEEEeccc
Confidence 35555677899997777888899999999999877654433 22234566 88999999987776665544432 1 1
Q ss_pred --C----eEEEcCCcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeecc-ccccccE
Q 018474 123 --G----VEAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEG-FYFANGI 195 (355)
Q Consensus 123 --g----~~~~~~~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~-~~~pngi 195 (355)
+ ...+......+..+.+.+++...++.+. .+.+..||.++++......+ ......+
T Consensus 140 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~-----------------D~~v~lwd~~~~~~~~~~~~h~~~v~~~ 202 (354)
T 2pbi_B 140 NENMAAKKKSVAMHTNYLSACSFTNSDMQILTASG-----------------DGTCALWDVESGQLLQSFHGHGADVLCL 202 (354)
T ss_dssp TCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEET-----------------TSEEEEEETTTCCEEEEEECCSSCEEEE
T ss_pred cccccccceeeeccCCcEEEEEEeCCCCEEEEEeC-----------------CCcEEEEeCCCCeEEEEEcCCCCCeEEE
Confidence 1 2222222356778888888865555433 56788899887765433222 2233456
Q ss_pred EEeC--CCCEEEEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCCEEEEeec
Q 018474 196 ALSK--NEDFVVVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIK 255 (355)
Q Consensus 196 ~~~~--dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~ 255 (355)
++++ +++. +++....+.|..|+++... ....+. ........+.+.++|++.++...
T Consensus 203 ~~~~~~~g~~-l~sgs~Dg~v~~wd~~~~~--~~~~~~-~h~~~v~~v~~~p~~~~l~s~s~ 260 (354)
T 2pbi_B 203 DLAPSETGNT-FVSGGCDKKAMVWDMRSGQ--CVQAFE-THESDVNSVRYYPSGDAFASGSD 260 (354)
T ss_dssp EECCCSSCCE-EEEEETTSCEEEEETTTCC--EEEEEC-CCSSCEEEEEECTTSSEEEEEET
T ss_pred EEEeCCCCCE-EEEEeCCCeEEEEECCCCc--EEEEec-CCCCCeEEEEEeCCCCEEEEEeC
Confidence 6766 4564 4555567789999985432 122222 22333456778888987766654
No 201
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=98.55 E-value=2.9e-05 Score=78.59 Aligned_cols=182 Identities=8% Similarity=0.032 Sum_probs=115.3
Q ss_pred CCCceEEEeeCCCeEEEEecCCEEEEEEcCCCeeEE-eeccCCCcccCeEECCCCCEEEEeCCCc-EEEEc-CCC---eE
Q 018474 52 NHPEDVSVVVSKGALYTATRDGWVKYFILHNETLVN-WKHIDSQSLLGLTTTKDGGVILCDNEKG-LLKVT-EEG---VE 125 (355)
Q Consensus 52 ~~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~-~~~~~~~p~~gl~~d~~g~L~v~~~~~g-l~~~~-~~g---~~ 125 (355)
....++++.+++..|.+++.+|.|..++..+++... +......+. .+++.++|..+++...+| +..++ .++ ..
T Consensus 56 ~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~-~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~ 134 (814)
T 3mkq_A 56 TPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIR-SIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQ 134 (814)
T ss_dssp SCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE-EEEECSSSSEEEEEETTSEEEEEEGGGTSEEEE
T ss_pred CcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEE-EEEEeCCCCEEEEEcCCCEEEEEECCCCceEEE
Confidence 456789999878888899999999999988776543 332334567 899999997554433444 55555 333 34
Q ss_pred EEcCCcCCcccEEEcc-CCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEE-eecc-ccccccEEEeC--C
Q 018474 126 AIVPDASFTNDVIAAS-DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTV-LHEG-FYFANGIALSK--N 200 (355)
Q Consensus 126 ~~~~~~~~~~~l~~d~-dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~-~~~~-~~~pngi~~~~--d 200 (355)
.+......+.+++++| +|++.++.+. .+.+..||..+++... +... ....+.++++| +
T Consensus 135 ~~~~~~~~v~~~~~~p~~~~~l~~~~~-----------------dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 197 (814)
T 3mkq_A 135 TFEGHEHFVMCVAFNPKDPSTFASGCL-----------------DRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPD 197 (814)
T ss_dssp EEECCSSCEEEEEEETTEEEEEEEEET-----------------TSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTT
T ss_pred EEcCCCCcEEEEEEEcCCCCEEEEEeC-----------------CCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCC
Confidence 4444336688899998 7766655332 4678888876554322 2222 24467789998 8
Q ss_pred CCEEEEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCCEEEEeec
Q 018474 201 EDFVVVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIK 255 (355)
Q Consensus 201 g~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~ 255 (355)
++.++.+ ...+.|..|++.... ....+. ...+....+.+.++|++.++...
T Consensus 198 ~~~l~~~-~~dg~i~~~d~~~~~--~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~ 248 (814)
T 3mkq_A 198 KPYMITA-SDDLTIKIWDYQTKS--CVATLE-GHMSNVSFAVFHPTLPIIISGSE 248 (814)
T ss_dssp CCEEEEE-CTTSEEEEEETTTTE--EEEEEE-CCSSCEEEEEECSSSSEEEEEET
T ss_pred CCEEEEE-eCCCEEEEEECCCCc--EEEEEc-CCCCCEEEEEEcCCCCEEEEEeC
Confidence 8855554 566789999875422 122221 22233455778888886665543
No 202
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=98.55 E-value=0.00049 Score=63.05 Aligned_cols=238 Identities=13% Similarity=0.138 Sum_probs=136.9
Q ss_pred CCCceEEEeeCCCeEEEEe-----------cCCEEEEE--EcCCCeeEEeecc--------CCCcccCeEECCCCCE-EE
Q 018474 52 NHPEDVSVVVSKGALYTAT-----------RDGWVKYF--ILHNETLVNWKHI--------DSQSLLGLTTTKDGGV-IL 109 (355)
Q Consensus 52 ~~p~~i~~d~~~g~l~~~~-----------~~g~i~~~--~~~~g~~~~~~~~--------~~~p~~gl~~d~~g~L-~v 109 (355)
..+.++..+ ++.++++. .++.+..+ +..+++....... ..... .+++.+||++ .+
T Consensus 74 ~~v~s~~~~--~~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~fSpDg~~la~ 150 (365)
T 4h5i_A 74 DSPTAIDAS--KGIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTK-LVYISREGTVAAI 150 (365)
T ss_dssp CCCCEEEEE--TTEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEE-EEEECTTSSCEEE
T ss_pred CceEEEEeC--CCEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEE-EEEEcCCCCEEEE
Confidence 456677665 55666654 23444444 4434444332211 11245 6889999985 45
Q ss_pred EeCC-CcEEEE-c-CCC--eEEEcCCcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEE
Q 018474 110 CDNE-KGLLKV-T-EEG--VEAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTV 184 (355)
Q Consensus 110 ~~~~-~gl~~~-~-~~g--~~~~~~~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~ 184 (355)
+... .+.+++ + +++ +..+.. ...+.+++++|||++.++.+. +.+.+++..+++...
T Consensus 151 as~~~d~~i~iwd~~~~~~~~~~~~-~~~V~~v~fspdg~~l~s~s~------------------~~~~~~~~~~~~~~~ 211 (365)
T 4h5i_A 151 ASSKVPAIMRIIDPSDLTEKFEIET-RGEVKDLHFSTDGKVVAYITG------------------SSLEVISTVTGSCIA 211 (365)
T ss_dssp EESCSSCEEEEEETTTTEEEEEEEC-SSCCCEEEECTTSSEEEEECS------------------SCEEEEETTTCCEEE
T ss_pred EECCCCCEEEEeECCCCcEEEEeCC-CCceEEEEEccCCceEEeccc------------------eeEEEEEeccCccee
Confidence 6543 465555 4 355 333332 256899999999987766432 245666655554332
Q ss_pred eec---cccccccEEEeCCCCEEEEEeCCCC---eEEEEEeCCCCCcce--eEecccCCCCcCceEECCCCCEEEEeecC
Q 018474 185 LHE---GFYFANGIALSKNEDFVVVCESWKF---RCRRYWLKGDRAGIL--DAFIENLPGGPDNINLAPDGSFWIGLIKM 256 (355)
Q Consensus 185 ~~~---~~~~pngi~~~~dg~~l~v~~~~~~---~i~~~~~~~~~~~~~--~~~~~~~~g~p~~i~~d~~G~lwv~~~~~ 256 (355)
... .......++++||++.+..+..... .++.+++........ ..+. ........++++++|++.++....
T Consensus 212 ~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~V~~~~~Spdg~~lasgs~D 290 (365)
T 4h5i_A 212 RKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVT-NRFKGITSMDVDMKGELAVLASND 290 (365)
T ss_dssp EECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEE-SSCSCEEEEEECTTSCEEEEEETT
T ss_pred eeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeec-CCCCCeEeEEECCCCCceEEEcCC
Confidence 211 1223467899999986666543322 455666533211111 1111 222223457789999877665432
Q ss_pred CchhhHhhhcchhHHHHHHhccchhhcccCCCCCCceEEEEEeCCCCeEEEEEE-CCCCCcccceeEEEEe-CCEEEEee
Q 018474 257 NQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFN-DPDATYISFVTSAAEF-DGNLYLAS 334 (355)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~-~~~g~~~~~~~~~~~~-~g~L~v~~ 334 (355)
+.|..+|.++++.+..+. .+.+ .++.+.+. +|++.++.
T Consensus 291 ------------------------------------~~V~iwd~~~~~~~~~~~~gH~~----~V~~v~fSpdg~~laS~ 330 (365)
T 4h5i_A 291 ------------------------------------NSIALVKLKDLSMSKIFKQAHSF----AITEVTISPDSTYVASV 330 (365)
T ss_dssp ------------------------------------SCEEEEETTTTEEEEEETTSSSS----CEEEEEECTTSCEEEEE
T ss_pred ------------------------------------CEEEEEECCCCcEEEEecCcccC----CEEEEEECCCCCEEEEE
Confidence 347778876788777663 3333 57778776 47777777
Q ss_pred cCCCeEEEeeCCCCCCCc
Q 018474 335 LQSNFIGILPLDGPEPQL 352 (355)
Q Consensus 335 ~~~~~i~~~~~~~~~~~~ 352 (355)
...+.|.+.+++..-++.
T Consensus 331 S~D~tvrvw~ip~~~~~~ 348 (365)
T 4h5i_A 331 SAANTIHIIKLPLNYANY 348 (365)
T ss_dssp ETTSEEEEEECCTTTTC-
T ss_pred eCCCeEEEEEcCCCCcCc
Confidence 778999999997655443
No 203
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=98.54 E-value=0.00015 Score=65.63 Aligned_cols=183 Identities=10% Similarity=0.047 Sum_probs=109.3
Q ss_pred CCCCCCceEEEeeCCCeEEEEecCCEEEEEEcCCCeeEE-eeccCCCcccCeEECCCCCEEEEeCCCc-EEEEcCCC--e
Q 018474 49 GCVNHPEDVSVVVSKGALYTATRDGWVKYFILHNETLVN-WKHIDSQSLLGLTTTKDGGVILCDNEKG-LLKVTEEG--V 124 (355)
Q Consensus 49 ~~~~~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~-~~~~~~~p~~gl~~d~~g~L~v~~~~~g-l~~~~~~g--~ 124 (355)
+.-..-.++++.+++..+..++.++.|..+|..+++... +......+. ++++.++|+.+++...++ +..++..+ .
T Consensus 74 ~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~-~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~ 152 (343)
T 2xzm_R 74 GHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVY-SVAFSPDNRQILSAGAEREIKLWNILGECK 152 (343)
T ss_dssp CCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEE-EEEECSSTTEEEEEETTSCEEEEESSSCEE
T ss_pred cCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEE-EEEECCCCCEEEEEcCCCEEEEEeccCCce
Confidence 333445678888667777888899999999998876543 332334567 899999998666544444 44555333 2
Q ss_pred EEEcC---CcCCcccEEEccCC----------cEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeeccccc
Q 018474 125 EAIVP---DASFTNDVIAASDG----------TLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYF 191 (355)
Q Consensus 125 ~~~~~---~~~~~~~l~~d~dG----------~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~~~~ 191 (355)
..... ....+..+.+++++ .++++ +...+.+..||........+......
T Consensus 153 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s-----------------~~~d~~i~iwd~~~~~~~~~~~h~~~ 215 (343)
T 2xzm_R 153 FSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFAS-----------------VGWDGRLKVWNTNFQIRYTFKAHESN 215 (343)
T ss_dssp EECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEE-----------------EETTSEEEEEETTTEEEEEEECCSSC
T ss_pred eeeecccCCCceeeeeeeccccccccccCCCCCEEEE-----------------EcCCCEEEEEcCCCceeEEEcCcccc
Confidence 22221 11456777777765 23332 22356788888543333333322334
Q ss_pred cccEEEeCCCCEEEEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCCEEEEe
Q 018474 192 ANGIALSKNEDFVVVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGL 253 (355)
Q Consensus 192 pngi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~ 253 (355)
.+.++++||++.+. +....+.|..|++..... ....+. .......++++++|.+..+.
T Consensus 216 v~~~~~s~~g~~l~-sgs~dg~v~iwd~~~~~~-~~~~~~--~~~~v~~v~~sp~~~~la~~ 273 (343)
T 2xzm_R 216 VNHLSISPNGKYIA-TGGKDKKLLIWDILNLTY-PQREFD--AGSTINQIAFNPKLQWVAVG 273 (343)
T ss_dssp EEEEEECTTSSEEE-EEETTCEEEEEESSCCSS-CSEEEE--CSSCEEEEEECSSSCEEEEE
T ss_pred ceEEEECCCCCEEE-EEcCCCeEEEEECCCCcc-cceeec--CCCcEEEEEECCCCCEEEEE
Confidence 57789999999554 445677898898743211 111121 11224567888888765544
No 204
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=98.53 E-value=0.00055 Score=62.91 Aligned_cols=260 Identities=10% Similarity=0.076 Sum_probs=141.7
Q ss_pred CCCCCCCceEEEeeCCCeEEEEecCCEEEEEEcCCCeeEEeec-cCCCcccCeEECCCCCEEEEeCCCc-EEEEc-CC--
Q 018474 48 EGCVNHPEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKH-IDSQSLLGLTTTKDGGVILCDNEKG-LLKVT-EE-- 122 (355)
Q Consensus 48 ~~~~~~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~~~-~~~~p~~gl~~d~~g~L~v~~~~~g-l~~~~-~~-- 122 (355)
.|.-..-.++++.|++..|..++.||.|..+|..+++...... ...... .+++.++|++.++...++ +..++ ..
T Consensus 63 ~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~-~~~~s~~g~~las~~~d~~v~iw~~~~~~ 141 (380)
T 3iz6_a 63 QGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVM-ECAFAPNGQSVACGGLDSACSIFNLSSQA 141 (380)
T ss_dssp CCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCC-CCEECTTSSEEEECCSSSCCEEEECCCCS
T ss_pred cccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEE-EEEECCCCCEEEEeeCCCcEEEEECCCCc
Confidence 4555566789999777788889999999999998876543322 234466 888999998776654444 33333 11
Q ss_pred ---C----eEEEcCCcCCcccEE-----------EccCCcEEEEeCCCC-----CC----Ccc------------ccccc
Q 018474 123 ---G----VEAIVPDASFTNDVI-----------AASDGTLYFTVASTK-----YT----PTD------------FYKDM 163 (355)
Q Consensus 123 ---g----~~~~~~~~~~~~~l~-----------~d~dG~ly~~d~~~~-----~~----~~~------------~~~~~ 163 (355)
+ .+.+......+..+. .+.||.+.+=|.... +. ..+ ....+
T Consensus 142 ~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 221 (380)
T 3iz6_a 142 DRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMF 221 (380)
T ss_dssp SCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEE
T ss_pred cccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEE
Confidence 1 111111111222222 223444333221100 00 000 00112
Q ss_pred cccCCCCeEEEEeCCCC--eEEEeeccccccccEEEeCCCCEEEEEeCCCCeEEEEEeCCCCCcceeEeccc------CC
Q 018474 164 AEGKPYGQLRKYDPKLK--ETTVLHEGFYFANGIALSKNEDFVVVCESWKFRCRRYWLKGDRAGILDAFIEN------LP 235 (355)
Q Consensus 164 ~~~~~~g~l~~~dp~~~--~~~~~~~~~~~pngi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~------~~ 235 (355)
..+...+.+..||.... ....+.......+.++++||++. +++....+.|..|++.... ....+... ..
T Consensus 222 ~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~-l~s~s~D~~i~lwd~~~~~--~~~~~~~~~~~~~~~~ 298 (380)
T 3iz6_a 222 ISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQR-FGTGSDDGTCRLFDMRTGH--QLQVYNREPDRNDNEL 298 (380)
T ss_dssp EEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSE-EEEECSSSCEEEEETTTTE--EEEEECCCCSSSCCSS
T ss_pred EEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCe-EEEEcCCCeEEEEECCCCc--EEEEeccccccccccc
Confidence 23344567788887522 22333322344678999999984 5556667889999975421 11222110 01
Q ss_pred CCcCceEECCCCCEEEEeecCCchhhHhhhcchhHHHHHHhccchhhcccCCCCCCceEEEEEeCCCCeEEEEEECCCCC
Q 018474 236 GGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDAT 315 (355)
Q Consensus 236 g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~ 315 (355)
.....++++++|++.++.... +.|..+|...++....+......
T Consensus 299 ~~v~~~~~s~~g~~l~~g~~d------------------------------------g~i~vwd~~~~~~~~~~~~~~~~ 342 (380)
T 3iz6_a 299 PIVTSVAFSISGRLLFAGYSN------------------------------------GDCYVWDTLLAEMVLNLGTLQNS 342 (380)
T ss_dssp CSCSEEEECSSSSEEEEECTT------------------------------------SCEEEEETTTCCEEEEECCSCSS
T ss_pred CceEEEEECCCCCEEEEEECC------------------------------------CCEEEEECCCCceEEEEecccCC
Confidence 123557889999877765432 45777887567776666321111
Q ss_pred cccceeEEEEe-CCEEEEeecCCCeEEEeeCCC
Q 018474 316 YISFVTSAAEF-DGNLYLASLQSNFIGILPLDG 347 (355)
Q Consensus 316 ~~~~~~~~~~~-~g~L~v~~~~~~~i~~~~~~~ 347 (355)
....++.+... +|++.++......|...++.+
T Consensus 343 h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~ 375 (380)
T 3iz6_a 343 HEGRISCLGLSSDGSALCTGSWDKNLKIWAFSG 375 (380)
T ss_dssp CCCCCCEEEECSSSSEEEEECTTSCEEEEECCS
T ss_pred CCCceEEEEECCCCCEEEEeeCCCCEEEEecCC
Confidence 13346666654 355555555577788777764
No 205
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=98.52 E-value=1.2e-05 Score=73.32 Aligned_cols=140 Identities=13% Similarity=0.051 Sum_probs=85.3
Q ss_pred cccCeEECCCCCEEEEeCCCcEEEEc-CCC--eEEEc----CCcCCcccEEEccCCcEEEEeCCCCCCCccccccccccC
Q 018474 95 SLLGLTTTKDGGVILCDNEKGLLKVT-EEG--VEAIV----PDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGK 167 (355)
Q Consensus 95 p~~gl~~d~~g~L~v~~~~~gl~~~~-~~g--~~~~~----~~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~ 167 (355)
.. .+++.++++|..+...+.+..++ .++ ..... .....+++++++++|+..++.+.
T Consensus 85 v~-~~~~s~d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~---------------- 147 (344)
T 4gqb_B 85 VA-DLTWVGERGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSK---------------- 147 (344)
T ss_dssp EE-EEEEETTTEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEET----------------
T ss_pred EE-EEEEeCCCeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeC----------------
Confidence 55 78888888888777554344445 344 32221 22257899999999987776433
Q ss_pred CCCeEEEEeCCCCeEEEeecc-ccccccEEEeCCCCEEEEEeCCCCeEEEEEeCCCCCcceeEecccCC-CCcCceEECC
Q 018474 168 PYGQLRKYDPKLKETTVLHEG-FYFANGIALSKNEDFVVVCESWKFRCRRYWLKGDRAGILDAFIENLP-GGPDNINLAP 245 (355)
Q Consensus 168 ~~g~l~~~dp~~~~~~~~~~~-~~~pngi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-g~p~~i~~d~ 245 (355)
.+.+..||.++++......+ ....+.+++++++..++++....+.|..|+++..+. ...+..... .....+.+.+
T Consensus 148 -d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~p 224 (344)
T 4gqb_B 148 -DICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKP--ASQIGCSAPGYLPTSLAWHP 224 (344)
T ss_dssp -TSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSC--EEECC----CCCEEEEEECS
T ss_pred -CCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccce--eeeeecceeeccceeeeecC
Confidence 45788899888865443333 233467899999976777777778899999854321 111111111 1234466666
Q ss_pred C-CCEEEEee
Q 018474 246 D-GSFWIGLI 254 (355)
Q Consensus 246 ~-G~lwv~~~ 254 (355)
+ ++++++..
T Consensus 225 ~~~~~l~sg~ 234 (344)
T 4gqb_B 225 QQSEVFVFGD 234 (344)
T ss_dssp SCTTEEEEEE
T ss_pred CCCcceEEec
Confidence 4 45665443
No 206
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=98.50 E-value=0.00013 Score=66.66 Aligned_cols=230 Identities=13% Similarity=0.067 Sum_probs=135.1
Q ss_pred CCCceEEEeeCCCeEEEEecCCEEEEEEcCCCe-------eEEeeccCCCcccCeEECCCCCEEEEeCCCc-EEEEc-CC
Q 018474 52 NHPEDVSVVVSKGALYTATRDGWVKYFILHNET-------LVNWKHIDSQSLLGLTTTKDGGVILCDNEKG-LLKVT-EE 122 (355)
Q Consensus 52 ~~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~-------~~~~~~~~~~p~~gl~~d~~g~L~v~~~~~g-l~~~~-~~ 122 (355)
....++++.|++..+.++..++.+..++...+. ...+....+... .+.+.+++..+++...++ +..++ .+
T Consensus 107 ~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~t~s~D~~v~lwd~~~ 185 (354)
T 2pbi_B 107 TWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLS-ACSFTNSDMQILTASGDGTCALWDVES 185 (354)
T ss_dssp SCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEE-EEEECSSSSEEEEEETTSEEEEEETTT
T ss_pred CCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEE-EEEEeCCCCEEEEEeCCCcEEEEeCCC
Confidence 345678888777777788889988888764321 122222233456 788888886555444445 44455 45
Q ss_pred C--eEEEcCCcCCcccEEEcc--CCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeec-cccccccEEE
Q 018474 123 G--VEAIVPDASFTNDVIAAS--DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHE-GFYFANGIAL 197 (355)
Q Consensus 123 g--~~~~~~~~~~~~~l~~d~--dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~-~~~~pngi~~ 197 (355)
+ ++.+......+..+.+.+ +|++.++.+. .+.+..||..+++...... .....+.+++
T Consensus 186 ~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~-----------------Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~ 248 (354)
T 2pbi_B 186 GQLLQSFHGHGADVLCLDLAPSETGNTFVSGGC-----------------DKKAMVWDMRSGQCVQAFETHESDVNSVRY 248 (354)
T ss_dssp CCEEEEEECCSSCEEEEEECCCSSCCEEEEEET-----------------TSCEEEEETTTCCEEEEECCCSSCEEEEEE
T ss_pred CeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeC-----------------CCeEEEEECCCCcEEEEecCCCCCeEEEEE
Confidence 5 555544435566777765 5666655332 5678899987776543332 2334578999
Q ss_pred eCCCCEEEEEeCCCCeEEEEEeCCCCCcceeEeccc-CCCCcCceEECCCCCEEEEeecCCchhhHhhhcchhHHHHHHh
Q 018474 198 SKNEDFVVVCESWKFRCRRYWLKGDRAGILDAFIEN-LPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDA 276 (355)
Q Consensus 198 ~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (355)
+|+++.++ +....+.|..|++.... ....+... .......+.++++|++.++....
T Consensus 249 ~p~~~~l~-s~s~D~~v~lwd~~~~~--~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d-------------------- 305 (354)
T 2pbi_B 249 YPSGDAFA-SGSDDATCRLYDLRADR--EVAIYSKESIIFGASSVDFSLSGRLLFAGYND-------------------- 305 (354)
T ss_dssp CTTSSEEE-EEETTSCEEEEETTTTE--EEEEECCTTCCSCEEEEEECTTSSEEEEEETT--------------------
T ss_pred eCCCCEEE-EEeCCCeEEEEECCCCc--EEEEEcCCCcccceeEEEEeCCCCEEEEEECC--------------------
Confidence 99998554 44567788889875421 12222111 11112456788899877665442
Q ss_pred ccchhhcccCCCCCCceEEEEEeCCCCeEEEEEECCCCCcccceeEEEEeC-CEEEEeecCCCeEEE
Q 018474 277 YPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFD-GNLYLASLQSNFIGI 342 (355)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~-g~L~v~~~~~~~i~~ 342 (355)
+.|..+|..+++.+..+..+.+ .++.+.... |++.++......|..
T Consensus 306 ----------------~~i~vwd~~~~~~~~~l~~h~~----~v~~l~~spdg~~l~sgs~D~~v~v 352 (354)
T 2pbi_B 306 ----------------YTINVWDVLKGSRVSILFGHEN----RVSTLRVSPDGTAFCSGSWDHTLRV 352 (354)
T ss_dssp ----------------SCEEEEETTTCSEEEEECCCSS----CEEEEEECTTSSCEEEEETTSEEEE
T ss_pred ----------------CcEEEEECCCCceEEEEECCCC----cEEEEEECCCCCEEEEEcCCCCEEe
Confidence 3477778657777777755443 455566543 444443333444443
No 207
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.50 E-value=1.1e-05 Score=80.85 Aligned_cols=135 Identities=10% Similarity=0.037 Sum_probs=86.9
Q ss_pred CCceEEEeeCCCeEEEEecCCEEEEEEcCCCeeEEeeccCC----CcccCeEECCCCCEE-EEeCC---------CcEEE
Q 018474 53 HPEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHIDS----QSLLGLTTTKDGGVI-LCDNE---------KGLLK 118 (355)
Q Consensus 53 ~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~~~~~~----~p~~gl~~d~~g~L~-v~~~~---------~gl~~ 118 (355)
.+.++++.+++..++ .+.+|.|+.+|..+++......... .+. .+++.+||+.. ++... ..++.
T Consensus 18 ~~~~~~~spdg~~~~-~~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~-~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~ 95 (723)
T 1xfd_A 18 HDPEAKWISDTEFIY-REQKGTVRLWNVETNTSTVLIEGKKIESLRAI-RYEISPDREYALFSYNVEPIYQHSYTGYYVL 95 (723)
T ss_dssp CCCCCCBSSSSCBCC-CCSSSCEEEBCGGGCCCEEEECTTTTTTTTCS-EEEECTTSSEEEEEESCCCCSSSCCCSEEEE
T ss_pred cccccEEcCCCcEEE-EeCCCCEEEEECCCCcEEEEeccccccccccc-eEEECCCCCEEEEEecCccceeecceeeEEE
Confidence 467788885555444 3568899999998887665543322 266 78999999844 44321 34667
Q ss_pred Ec-CCC-eEEEcCCc---CCcccEEEccCCc-EEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeecccc--
Q 018474 119 VT-EEG-VEAIVPDA---SFTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFY-- 190 (355)
Q Consensus 119 ~~-~~g-~~~~~~~~---~~~~~l~~d~dG~-ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~~~-- 190 (355)
++ .++ .+.+.... ..+..++++|||+ |.++. .+.++.+|..+++...+.....
T Consensus 96 ~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~-------------------~~~i~~~~~~~g~~~~~~~~~~~~ 156 (723)
T 1xfd_A 96 SKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIF-------------------ENNIYYCAHVGKQAIRVVSTGKEG 156 (723)
T ss_dssp EESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEE-------------------TTEEEEESSSSSCCEEEECCCBTT
T ss_pred EECCCCceEeccCCccccccccccEECCCCCEEEEEE-------------------CCeEEEEECCCCceEEEecCCCCC
Confidence 77 455 55444322 2377889999994 55542 1368888887776554433211
Q ss_pred -----------------ccccEEEeCCCCEEEEEe
Q 018474 191 -----------------FANGIALSKNEDFVVVCE 208 (355)
Q Consensus 191 -----------------~pngi~~~~dg~~l~v~~ 208 (355)
...+++++|||+.|+++.
T Consensus 157 ~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~ 191 (723)
T 1xfd_A 157 VIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAA 191 (723)
T ss_dssp TEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEE
T ss_pred ceECcccceeEEEEeccCcceEEECCCCCEEEEEE
Confidence 125799999999887765
No 208
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=98.50 E-value=5.1e-05 Score=74.69 Aligned_cols=241 Identities=14% Similarity=0.079 Sum_probs=139.4
Q ss_pred CCCCceEEEeeCCCeEEEEecCCEEEEEEcCCCeeEE-eeccCCCcccCeEECCCCCEEEEeCCCcEEEE-cC-CC----
Q 018474 51 VNHPEDVSVVVSKGALYTATRDGWVKYFILHNETLVN-WKHIDSQSLLGLTTTKDGGVILCDNEKGLLKV-TE-EG---- 123 (355)
Q Consensus 51 ~~~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~-~~~~~~~p~~gl~~d~~g~L~v~~~~~gl~~~-~~-~g---- 123 (355)
...|.+++++|+++.+..+. ++.|..++..+++... +........ .+++.++|++.++...++.+++ +. ++
T Consensus 18 ~g~~~~~~~spdg~~l~~~~-~~~v~l~~~~~~~~~~~~~~h~~~v~-~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~ 95 (611)
T 1nr0_A 18 RGTAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTT-VAKTSPSGYYCASGDVHGNVRIWDTTQTTHIL 95 (611)
T ss_dssp TTCCCCCEECTTSSEEEEEE-TTEEEEEETTCSSCCEEECCCSSCEE-EEEECTTSSEEEEEETTSEEEEEESSSTTCCE
T ss_pred cCceeEEeeCCCCCEEEeCC-CCEEEEecCCCcccCeEecCCCCceE-EEEECCCCcEEEEEeCCCCEEEeECCCCccee
Confidence 45788899997666666665 5688889987665433 322234466 8999999997776555565554 42 33
Q ss_pred eEEEcCCcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeeccccccccEEEeCCCCE
Q 018474 124 VEAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYFANGIALSKNEDF 203 (355)
Q Consensus 124 ~~~~~~~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~~~~pngi~~~~dg~~ 203 (355)
...+......+++++++++|+..++..... ...+.++.||.. .....+.......+.++++|++..
T Consensus 96 ~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~-------------~~~~~v~~wd~~-~~~~~l~gh~~~v~~v~f~p~~~~ 161 (611)
T 1nr0_A 96 KTTIPVFSGPVKDISWDSESKRIAAVGEGR-------------ERFGHVFLFDTG-TSNGNLTGQARAMNSVDFKPSRPF 161 (611)
T ss_dssp EEEEECSSSCEEEEEECTTSCEEEEEECCS-------------SCSEEEEETTTC-CBCBCCCCCSSCEEEEEECSSSSC
T ss_pred eEeecccCCceEEEEECCCCCEEEEEECCC-------------CceeEEEEeeCC-CCcceecCCCCCceEEEECCCCCe
Confidence 223333336789999999997665533210 112456666632 111122222234567899999876
Q ss_pred EEEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCCEEEEeecCCchhhHhhhcchhHHHHHHhccchhhc
Q 018474 204 VVVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISL 283 (355)
Q Consensus 204 l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (355)
.+++....+.|..|+.... .....+. ........+.+.++|++.++....
T Consensus 162 ~l~s~s~D~~v~lwd~~~~--~~~~~l~-~H~~~V~~v~fspdg~~las~s~D--------------------------- 211 (611)
T 1nr0_A 162 RIISGSDDNTVAIFEGPPF--KFKSTFG-EHTKFVHSVRYNPDGSLFASTGGD--------------------------- 211 (611)
T ss_dssp EEEEEETTSCEEEEETTTB--EEEEEEC-CCSSCEEEEEECTTSSEEEEEETT---------------------------
T ss_pred EEEEEeCCCeEEEEECCCC--eEeeeec-cccCceEEEEECCCCCEEEEEECC---------------------------
Confidence 5666667778888885321 1112222 233334567889999987766542
Q ss_pred ccCCCCCCceEEEEEeCCCCeEEEEEECCC----CCcccceeEEEEe-CCEEEEeecCCCeEEEeeCCC
Q 018474 284 LLPMGSDAGARVVKVDGNDGKIIRDFNDPD----ATYISFVTSAAEF-DGNLYLASLQSNFIGILPLDG 347 (355)
Q Consensus 284 ~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~----g~~~~~~~~~~~~-~g~L~v~~~~~~~i~~~~~~~ 347 (355)
+.|..+|..+|+....+.... + ....+..+... ++++.++......|...++.+
T Consensus 212 ---------~~i~lwd~~~g~~~~~~~~~~~~~~~-h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~ 270 (611)
T 1nr0_A 212 ---------GTIVLYNGVDGTKTGVFEDDSLKNVA-HSGSVFGLTWSPDGTKIASASADKTIKIWNVAT 270 (611)
T ss_dssp ---------SCEEEEETTTCCEEEECBCTTSSSCS-SSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred ---------CcEEEEECCCCcEeeeeccccccccc-cCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCC
Confidence 246666754666665553210 1 12245555554 344444444456666666653
No 209
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=98.49 E-value=8.7e-05 Score=78.96 Aligned_cols=240 Identities=13% Similarity=0.074 Sum_probs=144.2
Q ss_pred CCCCCCceEEEeeCCCeEEEEecCCEEEEEEcCCCeeEEeec-cCCCcccCeEECCCCCEEEEeCCCc-EEEEc-CCC--
Q 018474 49 GCVNHPEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKH-IDSQSLLGLTTTKDGGVILCDNEKG-LLKVT-EEG-- 123 (355)
Q Consensus 49 ~~~~~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~~~-~~~~p~~gl~~d~~g~L~v~~~~~g-l~~~~-~~g-- 123 (355)
+....-.++++.+++..+.+++.+|.|..++..+++...... ....+. ++++.++|++.++...++ +..++ .++
T Consensus 613 ~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~-~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~ 691 (1249)
T 3sfz_A 613 PHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVL-CCAFSSDDSYIATCSADKKVKIWDSATGKL 691 (1249)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEE-EEEECTTSSEEEEEETTSEEEEEETTTCCE
T ss_pred cccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEE-EEEEecCCCEEEEEeCCCeEEEEECCCCce
Confidence 444556788999777778888889999999998876543322 234567 899999998666554545 55556 456
Q ss_pred eEEEcCCcCCcccEEEccCC--cEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEee-ccccccccEEEeCC
Q 018474 124 VEAIVPDASFTNDVIAASDG--TLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH-EGFYFANGIALSKN 200 (355)
Q Consensus 124 ~~~~~~~~~~~~~l~~d~dG--~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~-~~~~~pngi~~~~d 200 (355)
+..+......+..+++.+++ .+.++.+. .+.+..||..+++..... ........++++|+
T Consensus 692 ~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~-----------------d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~ 754 (1249)
T 3sfz_A 692 VHTYDEHSEQVNCCHFTNKSNHLLLATGSN-----------------DFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPD 754 (1249)
T ss_dssp EEEEECCSSCEEEEEECSSSSCCEEEEEET-----------------TSCEEEEETTSSSEEEEECCCSSCEEEEEECSS
T ss_pred EEEEcCCCCcEEEEEEecCCCceEEEEEeC-----------------CCeEEEEECCCcchhheecCCCCCEEEEEEecC
Confidence 55555444678888888853 45444322 567888898777654332 22334567899999
Q ss_pred CCEEEEEeCCCCeEEEEEeCCCCCc-ceeE---ec------ccCCCCcCceEECCCCCEEEEeecCCchhhHhhhcchhH
Q 018474 201 EDFVVVCESWKFRCRRYWLKGDRAG-ILDA---FI------ENLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREK 270 (355)
Q Consensus 201 g~~l~v~~~~~~~i~~~~~~~~~~~-~~~~---~~------~~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~ 270 (355)
++.++.+ +..+.|..|++...... .... +. .........+.++++|+..++...
T Consensus 755 ~~~l~s~-s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~--------------- 818 (1249)
T 3sfz_A 755 DELLASC-SADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAK--------------- 818 (1249)
T ss_dssp TTEEEEE-ESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEET---------------
T ss_pred CCEEEEE-ECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcC---------------
Confidence 9955554 45678999987543211 0000 00 001112345678889987776654
Q ss_pred HHHHHhccchhhcccCCCCCCceEEEEEeCCCCeEEEEEECCCCCcccceeEEEEe-CCEEEEeecCCCeEEEeeCCC
Q 018474 271 WELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF-DGNLYLASLQSNFIGILPLDG 347 (355)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-~g~L~v~~~~~~~i~~~~~~~ 347 (355)
+.+..++..+++....+.... ...++.+... ++++.+.+.....|..+++.+
T Consensus 819 ----------------------~~v~~~d~~~~~~~~~~~~~~---~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~ 871 (1249)
T 3sfz_A 819 ----------------------NKVLLFDIHTSGLLAEIHTGH---HSTIQYCDFSPYDHLAVIALSQYCVELWNIDS 871 (1249)
T ss_dssp ----------------------TEEEEEETTTCCEEEEEECSS---SSCCCEEEECSSTTEEEEECSSSCEEEEETTT
T ss_pred ----------------------CcEEEEEecCCCceeEEcCCC---CCceEEEEEcCCCCEEEEEeCCCeEEEEEcCC
Confidence 357777765666666554322 1133444433 244444444455666666543
No 210
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.48 E-value=1.1e-05 Score=78.78 Aligned_cols=175 Identities=15% Similarity=0.099 Sum_probs=100.8
Q ss_pred CceEEEeeCCCeEEEEec-CCEEEEEEcCCCeeEEeeccC-CCcccCeEECCCCCEEEEeC--C-C--cEEEEcC--CC-
Q 018474 54 PEDVSVVVSKGALYTATR-DGWVKYFILHNETLVNWKHID-SQSLLGLTTTKDGGVILCDN--E-K--GLLKVTE--EG- 123 (355)
Q Consensus 54 p~~i~~d~~~g~l~~~~~-~g~i~~~~~~~g~~~~~~~~~-~~p~~gl~~d~~g~L~v~~~--~-~--gl~~~~~--~g- 123 (355)
-.++++.+++..|..++. +|.+..++..+++.+++.... .... .+++.++..+|.++. + . .++.++. +|
T Consensus 24 ~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~-~~~~spd~~l~~~~~~~g~~~~~l~~~~~~~~g~ 102 (582)
T 3o4h_A 24 KYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVL-DPHYGVGRVILVRDVSKGAEQHALFKVNTSRPGE 102 (582)
T ss_dssp EEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEEC-EECTTCSEEEEEEECSTTSCCEEEEEEETTSTTC
T ss_pred hheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccc-cccCCCCeEEEEeccCCCCcceEEEEEeccCCCc
Confidence 346677767777766554 787766666677776654433 2345 666777733455553 1 1 3666665 56
Q ss_pred eEEEcCCcCCcccEEEccCC-cEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeeccccccccEEEeCCCC
Q 018474 124 VEAIVPDASFTNDVIAASDG-TLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYFANGIALSKNED 202 (355)
Q Consensus 124 ~~~~~~~~~~~~~l~~d~dG-~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~~~~pngi~~~~dg~ 202 (355)
...+... ......++++|| .++++... .+.+..||.++++.+.+..... ..++++|||+
T Consensus 103 ~~~l~~~-~~~~~~~~s~dg~~~~~~s~~-----------------~~~~~l~d~~~g~~~~l~~~~~--~~~~~spDG~ 162 (582)
T 3o4h_A 103 EQRLEAV-KPMRILSGVDTGEAVVFTGAT-----------------EDRVALYALDGGGLRELARLPG--FGFVSDIRGD 162 (582)
T ss_dssp CEECTTS-CSBEEEEEEECSSCEEEEEEC-----------------SSCEEEEEEETTEEEEEEEESS--CEEEEEEETT
T ss_pred cccccCC-CCceeeeeCCCCCeEEEEecC-----------------CCCceEEEccCCcEEEeecCCC--ceEEECCCCC
Confidence 4443332 233345666666 34443322 2234466777887766654332 7889999999
Q ss_pred EEEEEeCC---CCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCCEEEEe
Q 018474 203 FVVVCESW---KFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGL 253 (355)
Q Consensus 203 ~l~v~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~ 253 (355)
.++.+... ...|+++++++... +.+. ...+.....++++||+..++.
T Consensus 163 ~la~~~~~~~~~~~i~~~d~~~g~~---~~l~-~~~~~~~~~~~SpDG~~l~~~ 212 (582)
T 3o4h_A 163 LIAGLGFFGGGRVSLFTSNLSSGGL---RVFD-SGEGSFSSASISPGMKVTAGL 212 (582)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCC---EEEC-CSSCEEEEEEECTTSCEEEEE
T ss_pred EEEEEEEcCCCCeEEEEEcCCCCCc---eEee-cCCCccccceECCCCCEEEEc
Confidence 88755432 14588888765332 2332 223334567788899755533
No 211
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=98.48 E-value=3.2e-05 Score=69.38 Aligned_cols=222 Identities=13% Similarity=0.057 Sum_probs=133.7
Q ss_pred CCCCceEEEeeCCC-eEEEEecCCEEEEEEc-CCCeeEEeec--cCCCcccCeEECCCCCEEEEeCCCc-EEEEc-CC--
Q 018474 51 VNHPEDVSVVVSKG-ALYTATRDGWVKYFIL-HNETLVNWKH--IDSQSLLGLTTTKDGGVILCDNEKG-LLKVT-EE-- 122 (355)
Q Consensus 51 ~~~p~~i~~d~~~g-~l~~~~~~g~i~~~~~-~~g~~~~~~~--~~~~p~~gl~~d~~g~L~v~~~~~g-l~~~~-~~-- 122 (355)
-....++++.+++. .+++++.+|.|..++. .+++...+.. ....+. ++++.+ ++++++...++ +..++ .+
T Consensus 56 ~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~v~-~l~~~~-~~~l~s~~~d~~i~iwd~~~~~ 133 (342)
T 1yfq_A 56 KHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGIC-RICKYG-DDKLIAASWDGLIEVIDPRNYG 133 (342)
T ss_dssp SSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEECBSCCCCSCEE-EEEEET-TTEEEEEETTSEEEEECHHHHT
T ss_pred CCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCceEeccccCCCCceE-EEEeCC-CCEEEEEcCCCeEEEEcccccc
Confidence 35677899997777 7889999999999998 8887766654 445566 888888 66555443444 55555 23
Q ss_pred -------C--eEEEcCCcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCC-Ce--EEEee-ccc
Q 018474 123 -------G--VEAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKL-KE--TTVLH-EGF 189 (355)
Q Consensus 123 -------g--~~~~~~~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~-~~--~~~~~-~~~ 189 (355)
+ +..+. ....+.++++++++ ++++.. .+.+..||..+ ++ ..... ...
T Consensus 134 ~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~-l~~~~~------------------d~~i~i~d~~~~~~~~~~~~~~~~~ 193 (342)
T 1yfq_A 134 DGVIAVKNLNSNNTK-VKNKIFTMDTNSSR-LIVGMN------------------NSQVQWFRLPLCEDDNGTIEESGLK 193 (342)
T ss_dssp TBCEEEEESCSSSSS-SCCCEEEEEECSSE-EEEEES------------------TTEEEEEESSCCTTCCCEEEECSCS
T ss_pred cccccccCCeeeEEe-eCCceEEEEecCCc-EEEEeC------------------CCeEEEEECCccccccceeeecCCC
Confidence 2 11111 12567778888777 554422 45788888766 32 22222 222
Q ss_pred cccccEEEeC-CCCEEEEEeCCCCeEEEEEeCCC--C--CcceeEecccC--------CCCcCceEECCCCCEEEEeecC
Q 018474 190 YFANGIALSK-NEDFVVVCESWKFRCRRYWLKGD--R--AGILDAFIENL--------PGGPDNINLAPDGSFWIGLIKM 256 (355)
Q Consensus 190 ~~pngi~~~~-dg~~l~v~~~~~~~i~~~~~~~~--~--~~~~~~~~~~~--------~g~p~~i~~d~~G~lwv~~~~~ 256 (355)
.....++++| +++.++.+. ..+.|..++++.. . ......+.... .+....+.++++|++.++....
T Consensus 194 ~~i~~i~~~~~~~~~l~~~~-~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d 272 (342)
T 1yfq_A 194 YQIRDVALLPKEQEGYACSS-IDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSD 272 (342)
T ss_dssp SCEEEEEECSGGGCEEEEEE-TTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETT
T ss_pred CceeEEEECCCCCCEEEEEe-cCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCC
Confidence 3457889999 998665554 5678888777543 1 11122222111 1123456788888755544331
Q ss_pred CchhhHhhhcchhHHHHHHhccchhhcccCCCCCCceEEEEEeCCCCeEEEEEECC-CCCcccceeEEEEeCCEEEEeec
Q 018474 257 NQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDP-DATYISFVTSAAEFDGNLYLASL 335 (355)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~-~g~~~~~~~~~~~~~g~L~v~~~ 335 (355)
+.|..+|..+++.+..+... .+ .+..+..++..|..++.
T Consensus 273 ------------------------------------g~i~vwd~~~~~~~~~~~~~h~~----~v~~~~~~~~~l~s~s~ 312 (342)
T 1yfq_A 273 ------------------------------------GIISCWNLQTRKKIKNFAKFNED----SVVKIACSDNILCLATS 312 (342)
T ss_dssp ------------------------------------SCEEEEETTTTEEEEECCCCSSS----EEEEEEECSSEEEEEEE
T ss_pred ------------------------------------ceEEEEcCccHhHhhhhhcccCC----CceEecCCCCeEEEEec
Confidence 35778887578877777654 43 34555533455555554
No 212
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=98.47 E-value=6.4e-05 Score=70.17 Aligned_cols=184 Identities=13% Similarity=0.081 Sum_probs=107.7
Q ss_pred CCCceEEEeeCCCeEEEEecCCEEEEEEcCCCe------------eEEeeccC------------CCcccCeEECCCC--
Q 018474 52 NHPEDVSVVVSKGALYTATRDGWVKYFILHNET------------LVNWKHID------------SQSLLGLTTTKDG-- 105 (355)
Q Consensus 52 ~~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~------------~~~~~~~~------------~~p~~gl~~d~~g-- 105 (355)
..-.++++.+++..|.+++.+|.|..++..+++ ...+.... ..+. .+++.+++
T Consensus 29 ~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~-~l~~~~~~~~ 107 (447)
T 3dw8_B 29 DIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKIN-KIRWLPQKNA 107 (447)
T ss_dssp GSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCC-EEEECCCCSS
T ss_pred CcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceE-EEEEcCCCCc
Confidence 445688899777778888999999999986654 22222112 3466 88998887
Q ss_pred CEEEEeCCCc-EEEEc-CCC-eE----------------------------------------EE-cCCcCCcccEEEcc
Q 018474 106 GVILCDNEKG-LLKVT-EEG-VE----------------------------------------AI-VPDASFTNDVIAAS 141 (355)
Q Consensus 106 ~L~v~~~~~g-l~~~~-~~g-~~----------------------------------------~~-~~~~~~~~~l~~d~ 141 (355)
.++++...++ +..++ .++ .. .+ ......+.++++++
T Consensus 108 ~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 187 (447)
T 3dw8_B 108 AQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINS 187 (447)
T ss_dssp SEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECT
T ss_pred ceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcC
Confidence 4444443444 44444 232 11 11 11225678889999
Q ss_pred CCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCe-EEEee--------ccccccccEEEeCCC-CEEEEEeCCC
Q 018474 142 DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKE-TTVLH--------EGFYFANGIALSKNE-DFVVVCESWK 211 (355)
Q Consensus 142 dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~-~~~~~--------~~~~~pngi~~~~dg-~~l~v~~~~~ 211 (355)
+|+++++. . .+.+..||..+.. ..... ........++++|++ + ++++....
T Consensus 188 ~~~~l~s~-~-----------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~-~l~s~~~d 248 (447)
T 3dw8_B 188 DYETYLSA-D-----------------DLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCN-TFVYSSSK 248 (447)
T ss_dssp TSSEEEEE-C-----------------SSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTT-EEEEEETT
T ss_pred CCCEEEEe-C-----------------CCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCc-EEEEEeCC
Confidence 98877764 2 5678888876322 21111 112235678999998 6 44555567
Q ss_pred CeEEEEEeCCCCCc--ceeEecccCC-----------CCcCceEECCCCCEEEEeec
Q 018474 212 FRCRRYWLKGDRAG--ILDAFIENLP-----------GGPDNINLAPDGSFWIGLIK 255 (355)
Q Consensus 212 ~~i~~~~~~~~~~~--~~~~~~~~~~-----------g~p~~i~~d~~G~lwv~~~~ 255 (355)
+.|..|++...... ....+..... +....+.++++|++.++...
T Consensus 249 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~ 305 (447)
T 3dw8_B 249 GTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY 305 (447)
T ss_dssp SCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES
T ss_pred CeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC
Confidence 78999998653321 1222321110 12455788999988776543
No 213
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=98.47 E-value=0.00012 Score=77.99 Aligned_cols=234 Identities=12% Similarity=0.056 Sum_probs=144.5
Q ss_pred CCCCceEEEeeCCCeEEEEecCCEEEEEEcCCCeeEEee-ccCCCcccCeEECCC--CCEEEEeCCCc-EEEEc-CCC--
Q 018474 51 VNHPEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWK-HIDSQSLLGLTTTKD--GGVILCDNEKG-LLKVT-EEG-- 123 (355)
Q Consensus 51 ~~~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~~-~~~~~p~~gl~~d~~--g~L~v~~~~~g-l~~~~-~~g-- 123 (355)
-....++++.+++..+.+++.+|.|..+|..+++..... ....... .+++.++ +.+.++...++ +..++ .++
T Consensus 657 ~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~ 735 (1249)
T 3sfz_A 657 EDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVN-CCHFTNKSNHLLLATGSNDFFLKLWDLNQKEC 735 (1249)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE-EEEECSSSSCCEEEEEETTSCEEEEETTSSSE
T ss_pred CCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEE-EEEEecCCCceEEEEEeCCCeEEEEECCCcch
Confidence 345678899977777888888999999999888654332 2234456 7888764 44554443444 55566 455
Q ss_pred eEEEcCCcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeecc--------------c
Q 018474 124 VEAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEG--------------F 189 (355)
Q Consensus 124 ~~~~~~~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~--------------~ 189 (355)
...+......+++++++++|...++.+. .+.+..||..+++....... .
T Consensus 736 ~~~~~~h~~~v~~~~~sp~~~~l~s~s~-----------------dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 798 (1249)
T 3sfz_A 736 RNTMFGHTNSVNHCRFSPDDELLASCSA-----------------DGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVE 798 (1249)
T ss_dssp EEEECCCSSCEEEEEECSSTTEEEEEES-----------------SSEEEEEEGGGTEEEEEEECCCCC--------CCC
T ss_pred hheecCCCCCEEEEEEecCCCEEEEEEC-----------------CCeEEEEeCCCCcccceecccccccccCCcccccc
Confidence 5555544467889999999987666433 45677777765543222110 1
Q ss_pred cccccEEEeCCCCEEEEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCCEEEEeecCCchhhHhhhcchh
Q 018474 190 YFANGIALSKNEDFVVVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCRE 269 (355)
Q Consensus 190 ~~pngi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~ 269 (355)
.....+++++|++.+.++. .+.+..|++.... ....+.....+....+.++++|++.++....
T Consensus 799 ~~v~~~~~s~dg~~l~~~~--~~~v~~~d~~~~~--~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d------------- 861 (1249)
T 3sfz_A 799 VIVKCCSWSADGDKIIVAA--KNKVLLFDIHTSG--LLAEIHTGHHSTIQYCDFSPYDHLAVIALSQ------------- 861 (1249)
T ss_dssp CCBCCCCBCTTSSEEEEEE--TTEEEEEETTTCC--EEEEEECSSSSCCCEEEECSSTTEEEEECSS-------------
T ss_pred ceEEEEEECCCCCEEEEEc--CCcEEEEEecCCC--ceeEEcCCCCCceEEEEEcCCCCEEEEEeCC-------------
Confidence 1345688999999777765 4789999875432 1222221233345667889999877766442
Q ss_pred HHHHHHhccchhhcccCCCCCCceEEEEEeCCCCeEEEEEECCCCCcccceeEEEEe-CCEEEEeecCCCeEEEeeCC
Q 018474 270 KWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF-DGNLYLASLQSNFIGILPLD 346 (355)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-~g~L~v~~~~~~~i~~~~~~ 346 (355)
+.|..++..+++....+..+.+ .++.+... +++..++......|...++.
T Consensus 862 -----------------------g~v~vwd~~~~~~~~~~~~h~~----~v~~v~~spdg~~l~s~s~dg~v~vw~~~ 912 (1249)
T 3sfz_A 862 -----------------------YCVELWNIDSRLKVADCRGHLS----WVHGVMFSPDGSSFLTASDDQTIRVWETK 912 (1249)
T ss_dssp -----------------------SCEEEEETTTTEEEEEECCCSS----CEEEEEECTTSSEEEEEETTSCEEEEEHH
T ss_pred -----------------------CeEEEEEcCCCceeeecCCCcc----ceEEEEECCCCCEEEEEeCCCeEEEEEcc
Confidence 3466677656676666655443 45555554 34434443345666666543
No 214
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=98.47 E-value=8.2e-05 Score=67.13 Aligned_cols=149 Identities=9% Similarity=-0.032 Sum_probs=93.4
Q ss_pred CCCceEEEeeC----CCeEEEEecCCEEEEEEcCCCeeEEeec-cCCCcccCeEECC-CCCEEEEeCCC-cEEEEc-CCC
Q 018474 52 NHPEDVSVVVS----KGALYTATRDGWVKYFILHNETLVNWKH-IDSQSLLGLTTTK-DGGVILCDNEK-GLLKVT-EEG 123 (355)
Q Consensus 52 ~~p~~i~~d~~----~g~l~~~~~~g~i~~~~~~~g~~~~~~~-~~~~p~~gl~~d~-~g~L~v~~~~~-gl~~~~-~~g 123 (355)
....++++.++ +..++++..+|.|..++..+++...... ....+. ++++.+ +++++++...+ .+..++ .++
T Consensus 70 ~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 148 (366)
T 3k26_A 70 ENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAIN-ELKFHPRDPNLLLSVSKDHALRLWNIQTD 148 (366)
T ss_dssp CCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEE-EEEECSSCTTEEEEEETTSCEEEEETTTT
T ss_pred CcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEE-EEEECCCCCCEEEEEeCCCeEEEEEeecC
Confidence 34567888865 3467788899999999987776543332 344567 899988 77765554444 466666 455
Q ss_pred --eEEE---cCCcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEe-------------
Q 018474 124 --VEAI---VPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVL------------- 185 (355)
Q Consensus 124 --~~~~---~~~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~------------- 185 (355)
...+ ......+.+++++++|...++... .+.+..||..+++....
T Consensus 149 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----------------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~ 211 (366)
T 3k26_A 149 TLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGM-----------------DHSLKLWRINSKRMMNAIKESYDYNPNKTN 211 (366)
T ss_dssp EEEEEECSTTSCSSCEEEEEECTTSSEEEEEET-----------------TSCEEEEESCSHHHHHHHHHHHTCCGGGCS
T ss_pred eEEEEecccccccCceeEEEECCCCCEEEEecC-----------------CCCEEEEECCCCccccccceeEEecCCCCc
Confidence 4444 223367889999999976665432 34566777654432100
Q ss_pred ----------------eccccccccEEEeCCCCEEEEEeCCCCeEEEEEeCC
Q 018474 186 ----------------HEGFYFANGIALSKNEDFVVVCESWKFRCRRYWLKG 221 (355)
Q Consensus 186 ----------------~~~~~~pngi~~~~dg~~l~v~~~~~~~i~~~~~~~ 221 (355)
.........++++ ++ ++++....+.|..|++..
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~-~l~~~~~d~~i~~wd~~~ 260 (366)
T 3k26_A 212 RPFISQKIHFPDFSTRDIHRNYVDCVRWL--GD-LILSKSCENAIVCWKPGK 260 (366)
T ss_dssp SCCCCEEECCCSEEECSSCSSCCCEEEEE--TT-EEEEECSSSEEEEEEESS
T ss_pred ccccceeeccCccccccCCcceEEEEEEc--CC-EEEEEecCCEEEEEeCCC
Confidence 0011223456776 55 455556678899999854
No 215
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=98.46 E-value=2.6e-06 Score=78.00 Aligned_cols=149 Identities=5% Similarity=-0.092 Sum_probs=89.6
Q ss_pred CCceEEEeeCCCeEEEEecCCEEEEEEcCCCeeEEee---ccCCCcccCeEECCCCCEEEEeCCCc-EEEEc-CCC----
Q 018474 53 HPEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWK---HIDSQSLLGLTTTKDGGVILCDNEKG-LLKVT-EEG---- 123 (355)
Q Consensus 53 ~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~~---~~~~~p~~gl~~d~~g~L~v~~~~~g-l~~~~-~~g---- 123 (355)
.-.++++.+++..|.+++.+|.|..++..++.++... .....+. ++++.++|+++++...++ +..++ .++
T Consensus 13 ~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~-~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~ 91 (377)
T 3dwl_C 13 PSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVT-CVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWK 91 (377)
T ss_dssp CCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEE-EEEECTTTCCEEEEETTSSEEEC------CCC
T ss_pred cEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEE-EEEEeCCCCEEEEEeCCCeEEEEEcCCCCcee
Confidence 4568889976666777778999999998777433222 1233466 889998887555444444 44444 222
Q ss_pred -eEEEcCCcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCe----EEEeec-cccccccEEE
Q 018474 124 -VEAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKE----TTVLHE-GFYFANGIAL 197 (355)
Q Consensus 124 -~~~~~~~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~----~~~~~~-~~~~pngi~~ 197 (355)
...+......+.+++++++|++.++.+. .+.+..||.++++ ...+.. .......+++
T Consensus 92 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----------------d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~ 154 (377)
T 3dwl_C 92 QTLVLLRLNRAATFVRWSPNEDKFAVGSG-----------------ARVISVCYFEQENDWWVSKHLKRPLRSTILSLDW 154 (377)
T ss_dssp CEEECCCCSSCEEEEECCTTSSCCEEEES-----------------SSCEEECCC-----CCCCEEECSSCCSCEEEEEE
T ss_pred eeeEecccCCceEEEEECCCCCEEEEEec-----------------CCeEEEEEECCcccceeeeEeecccCCCeEEEEE
Confidence 1222222367888999998865554322 3457777766554 233332 2334578999
Q ss_pred eCCCCEEEEEeCCCCeEEEEEeC
Q 018474 198 SKNEDFVVVCESWKFRCRRYWLK 220 (355)
Q Consensus 198 ~~dg~~l~v~~~~~~~i~~~~~~ 220 (355)
+|+++.++.+. ..+.|..|+++
T Consensus 155 ~~~~~~l~~~~-~d~~i~iwd~~ 176 (377)
T 3dwl_C 155 HPNNVLLAAGC-ADRKAYVLSAY 176 (377)
T ss_dssp CTTSSEEEEEE-SSSCEEEEEEC
T ss_pred cCCCCEEEEEe-CCCEEEEEEEE
Confidence 99998665554 56788888874
No 216
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=98.46 E-value=0.00035 Score=68.72 Aligned_cols=186 Identities=10% Similarity=0.023 Sum_probs=113.3
Q ss_pred CCCCCCceEEEeeCCCeEEEEecCCEEEEEEcCCCe--eE-EeeccCCCcccCeEECCCCCEEEEeCCC----cEEEEcC
Q 018474 49 GCVNHPEDVSVVVSKGALYTATRDGWVKYFILHNET--LV-NWKHIDSQSLLGLTTTKDGGVILCDNEK----GLLKVTE 121 (355)
Q Consensus 49 ~~~~~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~--~~-~~~~~~~~p~~gl~~d~~g~L~v~~~~~----gl~~~~~ 121 (355)
+.-..-.++++.|++..|..++.+|.|..+|..+++ .. .+....+... .++++++|+..++...+ +.+++-.
T Consensus 57 ~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~-~v~fs~dg~~l~~~~~~~~~~~~v~~wd 135 (611)
T 1nr0_A 57 EHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVK-DISWDSESKRIAAVGEGRERFGHVFLFD 135 (611)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEE-EEEECTTSCEEEEEECCSSCSEEEEETT
T ss_pred CCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceE-EEEECCCCCEEEEEECCCCceeEEEEee
Confidence 333445678899777778888899999999985442 22 2222234567 89999999866654321 2333333
Q ss_pred CC--eEEEcCCcCCcccEEEccCCc-EEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeecc-ccccccEEE
Q 018474 122 EG--VEAIVPDASFTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEG-FYFANGIAL 197 (355)
Q Consensus 122 ~g--~~~~~~~~~~~~~l~~d~dG~-ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~-~~~pngi~~ 197 (355)
.+ ...+......++++++.|++. ..++.+. .+.+..||..+++......+ ....+.+++
T Consensus 136 ~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~-----------------D~~v~lwd~~~~~~~~~l~~H~~~V~~v~f 198 (611)
T 1nr0_A 136 TGTSNGNLTGQARAMNSVDFKPSRPFRIISGSD-----------------DNTVAIFEGPPFKFKSTFGEHTKFVHSVRY 198 (611)
T ss_dssp TCCBCBCCCCCSSCEEEEEECSSSSCEEEEEET-----------------TSCEEEEETTTBEEEEEECCCSSCEEEEEE
T ss_pred CCCCcceecCCCCCceEEEECCCCCeEEEEEeC-----------------CCeEEEEECCCCeEeeeeccccCceEEEEE
Confidence 33 333333336788999999985 3444332 45677788766654332222 234578999
Q ss_pred eCCCCEEEEEeCCCCeEEEEEeCCCCCcceeEecc------cCCCCcCceEECCCCCEEEEeec
Q 018474 198 SKNEDFVVVCESWKFRCRRYWLKGDRAGILDAFIE------NLPGGPDNINLAPDGSFWIGLIK 255 (355)
Q Consensus 198 ~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~------~~~g~p~~i~~d~~G~lwv~~~~ 255 (355)
+||++. +++....+.|..+++.... ....+.. ...+....+.++++|++.++...
T Consensus 199 spdg~~-las~s~D~~i~lwd~~~g~--~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~ 259 (611)
T 1nr0_A 199 NPDGSL-FASTGGDGTIVLYNGVDGT--KTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASA 259 (611)
T ss_dssp CTTSSE-EEEEETTSCEEEEETTTCC--EEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEET
T ss_pred CCCCCE-EEEEECCCcEEEEECCCCc--EeeeeccccccccccCCCEEEEEECCCCCEEEEEeC
Confidence 999994 4555567788888864321 1111211 12233455788999987776654
No 217
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=98.46 E-value=6.6e-05 Score=75.00 Aligned_cols=186 Identities=15% Similarity=0.172 Sum_probs=114.7
Q ss_pred CCCCCCceEEEeeCC-CeEEEEecCCEEEEEEcCCCe-----e-EEeeccCCCcccCeEECCCCCEEEEeCCCcEEE-Ec
Q 018474 49 GCVNHPEDVSVVVSK-GALYTATRDGWVKYFILHNET-----L-VNWKHIDSQSLLGLTTTKDGGVILCDNEKGLLK-VT 120 (355)
Q Consensus 49 ~~~~~p~~i~~d~~~-g~l~~~~~~g~i~~~~~~~g~-----~-~~~~~~~~~p~~gl~~d~~g~L~v~~~~~gl~~-~~ 120 (355)
+.-..-.++++.+++ ..|..++.|+.|..++..++. . ..+......+. ++++.++|++.++...++.++ ++
T Consensus 380 ~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~-~v~~s~~g~~l~sgs~Dg~v~vwd 458 (694)
T 3dm0_A 380 AHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVE-DVVLSSDGQFALSGSWDGELRLWD 458 (694)
T ss_dssp CCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEE-EEEECTTSSEEEEEETTSEEEEEE
T ss_pred cCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEE-EEEECCCCCEEEEEeCCCcEEEEE
Confidence 444455677776544 456678889999999875431 1 12222234466 889999998776655556444 45
Q ss_pred -CCC--eEEEcCCcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeecc----ccccc
Q 018474 121 -EEG--VEAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEG----FYFAN 193 (355)
Q Consensus 121 -~~g--~~~~~~~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~----~~~pn 193 (355)
.++ .+.+......+.+++++++|+..++.+. .+.+..||..+.....+... .....
T Consensus 459 ~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~-----------------D~~i~iwd~~~~~~~~~~~~~~~h~~~v~ 521 (694)
T 3dm0_A 459 LAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASR-----------------DRTIKLWNTLGECKYTISEGGEGHRDWVS 521 (694)
T ss_dssp TTTTEEEEEEECCSSCEEEEEECTTSSCEEEEET-----------------TSCEEEECTTSCEEEEECSSTTSCSSCEE
T ss_pred CCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeC-----------------CCEEEEEECCCCcceeeccCCCCCCCcEE
Confidence 355 4555444467889999999976665433 45677777655443333221 12245
Q ss_pred cEEEeCCCC-EEEEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCCEEEEeec
Q 018474 194 GIALSKNED-FVVVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIK 255 (355)
Q Consensus 194 gi~~~~dg~-~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~ 255 (355)
.++++|++. ..+++....+.|..|+++..+. ...+. ...+....+.++++|++.++...
T Consensus 522 ~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~--~~~~~-~h~~~v~~v~~spdg~~l~sg~~ 581 (694)
T 3dm0_A 522 CVRFSPNTLQPTIVSASWDKTVKVWNLSNCKL--RSTLA-GHTGYVSTVAVSPDGSLCASGGK 581 (694)
T ss_dssp EEEECSCSSSCEEEEEETTSCEEEEETTTCCE--EEEEC-CCSSCEEEEEECTTSSEEEEEET
T ss_pred EEEEeCCCCcceEEEEeCCCeEEEEECCCCcE--EEEEc-CCCCCEEEEEEeCCCCEEEEEeC
Confidence 788999873 3556666678899999854321 22222 33344566788999988776654
No 218
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=98.45 E-value=3.1e-05 Score=71.78 Aligned_cols=185 Identities=14% Similarity=0.109 Sum_probs=118.2
Q ss_pred CCCCCceEEEeeCC-CeEEEEecCCEEEEEEcCCCeeEEee--c-cCCCcccCeEECCCCCEEEEeCCCc-EEEEc-CCC
Q 018474 50 CVNHPEDVSVVVSK-GALYTATRDGWVKYFILHNETLVNWK--H-IDSQSLLGLTTTKDGGVILCDNEKG-LLKVT-EEG 123 (355)
Q Consensus 50 ~~~~p~~i~~d~~~-g~l~~~~~~g~i~~~~~~~g~~~~~~--~-~~~~p~~gl~~d~~g~L~v~~~~~g-l~~~~-~~g 123 (355)
.-....++++.+.+ ..+++++.+|.|..+|..+++..... . ....+. ++++.++|+++++...++ +..++ .++
T Consensus 130 h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 208 (402)
T 2aq5_A 130 HTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIY-SVDWSRDGALICTSCRDKRVRVIEPRKG 208 (402)
T ss_dssp CSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEE-EEEECTTSSCEEEEETTSEEEEEETTTT
T ss_pred CCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceE-EEEECCCCCEEEEEecCCcEEEEeCCCC
Confidence 34556788998665 46778888999999999888765433 2 234566 899999887555444444 55666 455
Q ss_pred --eEEE-cCCc-CCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeE--EEe-eccccccccEE
Q 018474 124 --VEAI-VPDA-SFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKET--TVL-HEGFYFANGIA 196 (355)
Q Consensus 124 --~~~~-~~~~-~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~--~~~-~~~~~~pngi~ 196 (355)
+..+ .... ..+..++++++|.++++... ....+.+..||..+++. ... .........++
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~--------------~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~ 274 (402)
T 2aq5_A 209 TVVAEKDRPHEGTRPVHAVFVSEGKILTTGFS--------------RMSERQVALWDTKHLEEPLSLQELDTSSGVLLPF 274 (402)
T ss_dssp EEEEEEECSSCSSSCCEEEECSTTEEEEEEEC--------------TTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEE
T ss_pred ceeeeeccCCCCCcceEEEEcCCCcEEEEecc--------------CCCCceEEEEcCccccCCceEEeccCCCceeEEE
Confidence 4444 2222 34788999999987766411 01256788888866532 111 12233466789
Q ss_pred EeCCCCEEEEEeCCCCeEEEEEeCCCC--CcceeEecccCCCCcCceEECCCCCEEE
Q 018474 197 LSKNEDFVVVCESWKFRCRRYWLKGDR--AGILDAFIENLPGGPDNINLAPDGSFWI 251 (355)
Q Consensus 197 ~~~dg~~l~v~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~g~p~~i~~d~~G~lwv 251 (355)
+++|++.++++....+.|..|+++... ......+ ...+...++.+.++|.+.+
T Consensus 275 ~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~--~~~~~v~~~~~sp~~~~~~ 329 (402)
T 2aq5_A 275 FDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMF--SSKESQRGMGYMPKRGLEV 329 (402)
T ss_dssp EETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEE--CCSSCCSEEEECCGGGSCG
T ss_pred EcCCCCEEEEEEcCCCeEEEEEecCCCcceEeeccc--ccCCcccceEEecccccce
Confidence 999999998888778899999986543 1122211 1223456778888776544
No 219
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=98.45 E-value=2.7e-05 Score=70.70 Aligned_cols=181 Identities=9% Similarity=-0.029 Sum_probs=111.3
Q ss_pred CCCCceEEEeeCCCeEEEEecCCEEEEEEcCCCeeEEee---ccCCCcccCeEECCCCCEEEE-eCCCcEEEEc-CCC--
Q 018474 51 VNHPEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWK---HIDSQSLLGLTTTKDGGVILC-DNEKGLLKVT-EEG-- 123 (355)
Q Consensus 51 ~~~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~~---~~~~~p~~gl~~d~~g~L~v~-~~~~gl~~~~-~~g-- 123 (355)
-....++++.+++..+++++.+|.|..++..+++..... .....+. .+++.++++.+++ ...+.+..++ ..+
T Consensus 52 ~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~ 130 (372)
T 1k8k_C 52 NGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAAR-CVRWAPNEKKFAVGSGSRVISICYFEQEND 130 (372)
T ss_dssp SSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEE-EEEECTTSSEEEEEETTSSEEEEEEETTTT
T ss_pred CCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCcee-EEEECCCCCEEEEEeCCCEEEEEEecCCCc
Confidence 345678999977777888888999999998777644322 2234566 8899988875554 4333454444 222
Q ss_pred ---eEEEcCC-cCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCC------------------CCe
Q 018474 124 ---VEAIVPD-ASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPK------------------LKE 181 (355)
Q Consensus 124 ---~~~~~~~-~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~------------------~~~ 181 (355)
...+... ...+.+++++++|+++++... .+.+..||.. +++
T Consensus 131 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-----------------dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~ 193 (372)
T 1k8k_C 131 WWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSC-----------------DFKCRIFSAYIKEVEERPAPTPWGSKMPFGE 193 (372)
T ss_dssp EEEEEEECTTCCSCEEEEEECTTSSEEEEEET-----------------TSCEEEEECCCTTTSCCCCCBTTBSCCCTTC
T ss_pred ceeeeeeecccCCCeeEEEEcCCCCEEEEEcC-----------------CCCEEEEEcccccccccccccccccccchhh
Confidence 1222222 267888999999976665432 4456677732 333
Q ss_pred E-EEeeccccccccEEEeCCCCEEEEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCCEEEEe
Q 018474 182 T-TVLHEGFYFANGIALSKNEDFVVVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGL 253 (355)
Q Consensus 182 ~-~~~~~~~~~pngi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~ 253 (355)
. ..+.........++++|+++.++.+. ..+.|..|+++..+ ....+. ........+.++++|++.++.
T Consensus 194 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~--~~~~~~-~~~~~v~~~~~~~~~~~l~~~ 262 (372)
T 1k8k_C 194 LMFESSSSCGWVHGVCFSANGSRVAWVS-HDSTVCLADADKKM--AVATLA-SETLPLLAVTFITESSLVAAG 262 (372)
T ss_dssp EEEECCCCSSCEEEEEECSSSSEEEEEE-TTTEEEEEEGGGTT--EEEEEE-CSSCCEEEEEEEETTEEEEEE
T ss_pred heEecCCCCCeEEEEEECCCCCEEEEEe-CCCEEEEEECCCCc--eeEEEc-cCCCCeEEEEEecCCCEEEEE
Confidence 2 22222233457899999999666554 56789999985432 122222 222224557788888766655
No 220
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=98.44 E-value=0.00018 Score=65.25 Aligned_cols=186 Identities=15% Similarity=0.131 Sum_probs=108.7
Q ss_pred CCCCceEEEeeCCCeEEEEecCCEEEEEEcCCCeeEE---eeccCCCcccCeEECCC--CCEEEEeCCCc-EEEEc-CCC
Q 018474 51 VNHPEDVSVVVSKGALYTATRDGWVKYFILHNETLVN---WKHIDSQSLLGLTTTKD--GGVILCDNEKG-LLKVT-EEG 123 (355)
Q Consensus 51 ~~~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~---~~~~~~~p~~gl~~d~~--g~L~v~~~~~g-l~~~~-~~g 123 (355)
-..-.++++.+++..|.++..+|.|..++..++.... +......+. ++++.++ ++++++...+| +..++ .++
T Consensus 11 ~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~ 89 (379)
T 3jrp_A 11 NELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVW-RVDWAHPKFGTILASCSYDGKVLIWKEENG 89 (379)
T ss_dssp CCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEE-EEEECCGGGCSEEEEEETTSCEEEEEEETT
T ss_pred cccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEE-EEEeCCCCCCCEEEEeccCCEEEEEEcCCC
Confidence 3456788899777778888889999999886443322 221233456 7888755 76555444444 55555 344
Q ss_pred -e---EEEcCCcCCcccEEEccC--CcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCe---EEEeecccccccc
Q 018474 124 -V---EAIVPDASFTNDVIAASD--GTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKE---TTVLHEGFYFANG 194 (355)
Q Consensus 124 -~---~~~~~~~~~~~~l~~d~d--G~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~---~~~~~~~~~~png 194 (355)
. ..+......+.+++++++ |.+.++... .+.+..||..+++ ...+.........
T Consensus 90 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~-----------------d~~i~v~d~~~~~~~~~~~~~~~~~~v~~ 152 (379)
T 3jrp_A 90 RWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASS-----------------DGKVSVVEFKENGTTSPIIIDAHAIGVNS 152 (379)
T ss_dssp EEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET-----------------TSEEEEEECCTTSCCCEEEEECCTTCEEE
T ss_pred ceeEeeeecCCCcceEEEEeCCCCCCCEEEEecC-----------------CCcEEEEecCCCCceeeEEecCCCCceEE
Confidence 2 222223367888999998 766655433 4577788776552 1222222333567
Q ss_pred EEEeC-------------CCCEEEEEeCCCCeEEEEEeCCCCCc-ceeEecccCCCCcCceEECCC---CCEEEEeec
Q 018474 195 IALSK-------------NEDFVVVCESWKFRCRRYWLKGDRAG-ILDAFIENLPGGPDNINLAPD---GSFWIGLIK 255 (355)
Q Consensus 195 i~~~~-------------dg~~l~v~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~g~p~~i~~d~~---G~lwv~~~~ 255 (355)
++++| |++.++.+ ...+.|..|++...... ..........+....+.++++ |++.++...
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~ 229 (379)
T 3jrp_A 153 ASWAPATIEEDGEHNGTKESRKFVTG-GADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQ 229 (379)
T ss_dssp EEECCCC----------CTTCEEEEE-ETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEET
T ss_pred EEEcCccccccccccCCCCCCEEEEE-eCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeC
Confidence 88888 67755554 45678999988643211 111111122233456778888 666665544
No 221
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.40 E-value=5.3e-05 Score=68.64 Aligned_cols=187 Identities=18% Similarity=0.216 Sum_probs=113.4
Q ss_pred CCCEEEEeCC-CcEEEEcCCC--eEEEcCCcCCcccEEEccC----C----cEEEEeCCCCCCCccccccccccCCCCeE
Q 018474 104 DGGVILCDNE-KGLLKVTEEG--VEAIVPDASFTNDVIAASD----G----TLYFTVASTKYTPTDFYKDMAEGKPYGQL 172 (355)
Q Consensus 104 ~g~L~v~~~~-~gl~~~~~~g--~~~~~~~~~~~~~l~~d~d----G----~ly~~d~~~~~~~~~~~~~~~~~~~~g~l 172 (355)
...+++++.. +||+.|+.+| ++.+.. ..+|.+.+-++ | .+++++.. ++...-.+
T Consensus 39 ~~s~ii~t~k~~gL~Vydl~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~-------------~~~n~l~v 103 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSLDGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRS-------------EGKNTIEI 103 (355)
T ss_dssp GGCEEEEEETTTEEEEEETTSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECS-------------TTCCEEEE
T ss_pred CccEEEEEcCCCCEEEEcCCCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCC-------------CCCCeEEE
Confidence 4455665433 5788888766 555543 34666655441 2 23455432 00112356
Q ss_pred EEEeCCCCeEEEee-------ccccccccEEE--eCC-CC-EEEEEeCCCCeEEEEEeCCC---CC--cceeEecccCCC
Q 018474 173 RKYDPKLKETTVLH-------EGFYFANGIAL--SKN-ED-FVVVCESWKFRCRRYWLKGD---RA--GILDAFIENLPG 236 (355)
Q Consensus 173 ~~~dp~~~~~~~~~-------~~~~~pngi~~--~~d-g~-~l~v~~~~~~~i~~~~~~~~---~~--~~~~~~~~~~~g 236 (355)
|.+||++++++.+. ..+..|.|+|+ +++ ++ ++|+++. .+++.+|.+... +. ...+.| .+++
T Consensus 104 f~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k-~G~~~q~~l~~~~~g~~~~~lVR~f--~lgs 180 (355)
T 3amr_A 104 YAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGK-EGEFEQYELKADKNGYISGKKVRAF--KMNS 180 (355)
T ss_dssp EEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECS-SSEEEEEEEEECTTSCEEEEEEEEE--ECSS
T ss_pred EEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECC-CCeEEEEEEEeCCCCcccceEEEEe--cCCC
Confidence 67799888887662 33477999999 664 44 5777765 478999887321 11 112223 3566
Q ss_pred CcCceEECC-CCCEEEEeecCCchhhHhhhcchhHHHHHHhccchhhcccCCCCCCceEEEEEe--CCC---CeEEEEEE
Q 018474 237 GPDNINLAP-DGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVD--GND---GKIIRDFN 310 (355)
Q Consensus 237 ~p~~i~~d~-~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~---g~~~~~~~ 310 (355)
.|.+++.|+ .|.|||+... .+|++|+ |+. ++.+..+.
T Consensus 181 q~EgcvvDd~~g~Lyv~eEd-------------------------------------~GIw~~da~p~~~~~~~~v~~~~ 223 (355)
T 3amr_A 181 QTEGMAADDEYGRLYIAEED-------------------------------------EAIWKFSAEPDGGSNGTVIDRAD 223 (355)
T ss_dssp CEEEEEEETTTTEEEEEETT-------------------------------------TEEEEEECSTTSCSCCEEEEEBS
T ss_pred CcceEEEcCCCCeEEEeccc-------------------------------------ceEEEEeCCcCCCCCceEEEEec
Confidence 789999985 5789999865 3699999 421 34444442
Q ss_pred CCCCCcccceeEEEE--eC---CEEEEeecCCCeEEEeeCCC
Q 018474 311 DPDATYISFVTSAAE--FD---GNLYLASLQSNFIGILPLDG 347 (355)
Q Consensus 311 ~~~g~~~~~~~~~~~--~~---g~L~v~~~~~~~i~~~~~~~ 347 (355)
. +.....+.++.. .. |+|++++-.++.+.+|+...
T Consensus 224 ~--g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~ 263 (355)
T 3amr_A 224 G--RHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQG 263 (355)
T ss_dssp S--SSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESST
T ss_pred C--CccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCC
Confidence 2 222224555543 22 58999999999999998863
No 222
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=98.40 E-value=2.2e-05 Score=72.98 Aligned_cols=138 Identities=9% Similarity=-0.032 Sum_probs=85.2
Q ss_pred EeeCCCeEEEEecCCEEEEEEcCC--CeeEEee--ccCCCcccCeEECC--CCCEEEEeCCC----cEEEEcCCC--eEE
Q 018474 59 VVVSKGALYTATRDGWVKYFILHN--ETLVNWK--HIDSQSLLGLTTTK--DGGVILCDNEK----GLLKVTEEG--VEA 126 (355)
Q Consensus 59 ~d~~~g~l~~~~~~g~i~~~~~~~--g~~~~~~--~~~~~p~~gl~~d~--~g~L~v~~~~~----gl~~~~~~g--~~~ 126 (355)
.| +.+.||+++..| +++++..+ .+++.+. ....... +|++|+ +++||++...+ +|++.+..| .+.
T Consensus 19 ~d-~~g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~-~i~~dp~~~~~l~~g~~~g~~g~gl~~s~D~G~tW~~ 95 (394)
T 3b7f_A 19 ES-GPVMLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIH-HIVQDPREPERMLMAARTGHLGPTVFRSDDGGGNWTE 95 (394)
T ss_dssp CC-SCCEEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEE-EEEECSSSTTCEEEEEEC--CCEEEEEESSTTSCCEE
T ss_pred CC-CCCEEEEEecCc-eEEEECCCCCCCceECCccCCCCceE-EEEECCCCCCeEEEEecCCCCCccEEEeCCCCCCceE
Confidence 44 578999999766 78887644 3566542 2234577 899998 78999998665 688876544 454
Q ss_pred EcCCc--------------CCcccEEEcc---CCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeeccc
Q 018474 127 IVPDA--------------SFTNDVIAAS---DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGF 189 (355)
Q Consensus 127 ~~~~~--------------~~~~~l~~d~---dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~~ 189 (355)
+.... ..+.++++++ .+++|+... .++|++.+..+..++.+....
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~------------------~ggl~~S~DgG~tW~~~~~~~ 157 (394)
T 3b7f_A 96 ATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTS------------------PQGLFRSTDHGASWEPVAGFN 157 (394)
T ss_dssp CSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEE------------------TTEEEEESSTTSBCEECHHHH
T ss_pred CCccccCCCcccccccccccceeEEEeCCCCCCCEEEEEec------------------CCcEEEEcCCCCCeEECcCcc
Confidence 43211 1244577885 578998632 357888876666666553210
Q ss_pred c-------------------ccccEEEeCC-CCEEEEEeCCCCeEEEEE
Q 018474 190 Y-------------------FANGIALSKN-EDFVVVCESWKFRCRRYW 218 (355)
Q Consensus 190 ~-------------------~pngi~~~~d-g~~l~v~~~~~~~i~~~~ 218 (355)
. .-..|+++|. .+.+|++.. .++|++.+
T Consensus 158 ~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~-~ggl~~s~ 205 (394)
T 3b7f_A 158 DHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMS-SGGVFEST 205 (394)
T ss_dssp TCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEE-TBEEEEES
T ss_pred CCccccccccccccCCCCCCceeEEEECCCCCCEEEEEEC-CCCEEEEC
Confidence 0 1125777763 345777743 35677664
No 223
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=98.40 E-value=0.00026 Score=66.01 Aligned_cols=236 Identities=11% Similarity=0.016 Sum_probs=139.5
Q ss_pred CceEEEeeCCCeEEEEecCCEEEEEEcCCCeeEEeecc-CCCcccCeEECCCCCEEEEeCCCc-EEEEc-CCC---eEEE
Q 018474 54 PEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHI-DSQSLLGLTTTKDGGVILCDNEKG-LLKVT-EEG---VEAI 127 (355)
Q Consensus 54 p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~~~~-~~~p~~gl~~d~~g~L~v~~~~~g-l~~~~-~~g---~~~~ 127 (355)
-.++++.+++..|.+++.+|.|..++..+++....... ..... .+.. ++++.++....+ +...+ ... +..+
T Consensus 150 V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~-~~s~--~~~~l~sgs~d~~i~~~d~~~~~~~~~~~ 226 (420)
T 4gga_A 150 ISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVG-SLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATL 226 (420)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEE-EEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEE
T ss_pred EEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceE-EEee--CCCEEEEEeCCCceeEeeecccceeeEEe
Confidence 46899997777888899999999999988875543322 22333 4544 455555444444 44444 222 4444
Q ss_pred cCCcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeE-----EEeeccccccccEEEeCCCC
Q 018474 128 VPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKET-----TVLHEGFYFANGIALSKNED 202 (355)
Q Consensus 128 ~~~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~-----~~~~~~~~~pngi~~~~dg~ 202 (355)
......+..+...++|+..++... .+.+..++..+++. ............++++|++.
T Consensus 227 ~~h~~~~~~~~~~~~g~~l~s~~~-----------------D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~ 289 (420)
T 4gga_A 227 SGHSQEVCGLRWAPDGRHLASGGN-----------------DNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQS 289 (420)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEET-----------------TSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCT
T ss_pred cccccceeeeeecCCCCeeeeeec-----------------cccceEEeeccccccceeeeeecccCCceeeeeeCCCcc
Confidence 444466777888888876665432 34566666544431 11111122235678888776
Q ss_pred EEEEEe--CCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCCEEEEeecCCchhhHhhhcchhHHHHHHhccch
Q 018474 203 FVVVCE--SWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGL 280 (355)
Q Consensus 203 ~l~v~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (355)
.++.+. +..+.|..|++..... ...+. .......+.+.++++..++..+
T Consensus 290 ~~la~~~gs~D~~I~iwd~~t~~~--~~~~~--~~~~v~~~~~~~~~~~lv~~sg------------------------- 340 (420)
T 4gga_A 290 NVLATGGGTSDRHIRIWNVCSGAC--LSAVD--AHSQVCSILWSPHYKELISGHG------------------------- 340 (420)
T ss_dssp TEEEEEECTTTCEEEEEETTTTEE--EEEEE--CSSCEEEEEEETTTTEEEEEEC-------------------------
T ss_pred cEEEEEeecCCCEEEEEeCCcccc--ceeec--cccceeeeeecCCCCeEEEEEe-------------------------
Confidence 555543 3456788888754221 11121 1223455667788876666543
Q ss_pred hhcccCCCCCCceEEEEEeCCCCeEEEEEECCCCCcccceeEEEEe-CCEEEEeecCCCeEEEeeCCCCCCC
Q 018474 281 ISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF-DGNLYLASLQSNFIGILPLDGPEPQ 351 (355)
Q Consensus 281 ~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-~g~L~v~~~~~~~i~~~~~~~~~~~ 351 (355)
...+.|..+|..+++.+..+..+.+ .++.+... +|++.++......|...++....|.
T Consensus 341 ---------~~d~~I~iwd~~~~~~v~~l~gH~~----~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~~~ 399 (420)
T 4gga_A 341 ---------FAQNQLVIWKYPTMAKVAELKGHTS----RVLSLTMSPDGATVASAAADETLRLWRCFELDPA 399 (420)
T ss_dssp ---------TTTCCEEEEETTTCCEEEEECCCSS----CEEEEEECTTSSCEEEEETTTEEEEECCSCSSCC
T ss_pred ---------cCCCEEEEEECCCCcEEEEEcCCCC----CEEEEEEcCCCCEEEEEecCCeEEEEECCCCCcc
Confidence 1124577788658888888876654 46666665 3555555555677888787665543
No 224
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=98.39 E-value=8.7e-05 Score=66.80 Aligned_cols=183 Identities=8% Similarity=0.018 Sum_probs=107.2
Q ss_pred CCCceEEEeeC---CCeEEEEecCCEEEEEEcCCCe--eEEeeccCCCcccCe------EECCCCCEEEEeCCCc-EEEE
Q 018474 52 NHPEDVSVVVS---KGALYTATRDGWVKYFILHNET--LVNWKHIDSQSLLGL------TTTKDGGVILCDNEKG-LLKV 119 (355)
Q Consensus 52 ~~p~~i~~d~~---~g~l~~~~~~g~i~~~~~~~g~--~~~~~~~~~~p~~gl------~~d~~g~L~v~~~~~g-l~~~ 119 (355)
....++++.+. +..++++..+|.|..++..+++ ...+........ ++ ++.++++++++....| +..+
T Consensus 66 ~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~s~~~~~l~~~~~d~~i~vw 144 (357)
T 3i2n_A 66 KPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIIN-AIDGIGGLGIGEGAPEIVTGSRDGTVKVW 144 (357)
T ss_dssp SCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEE-EEEEESGGGCC-CCCEEEEEETTSCEEEE
T ss_pred CcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceE-EEeeccccccCCCccEEEEEeCCCeEEEE
Confidence 34567778755 4778888999999999987665 233322223344 55 3456777655544444 5556
Q ss_pred c-CCC---eEEEcCCc----CCcccEE----EccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeec
Q 018474 120 T-EEG---VEAIVPDA----SFTNDVI----AASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHE 187 (355)
Q Consensus 120 ~-~~g---~~~~~~~~----~~~~~l~----~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~ 187 (355)
+ .++ +..+.... ..+.+++ +++++++.++... .+.+..||..+++......
T Consensus 145 d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~-----------------d~~i~i~d~~~~~~~~~~~ 207 (357)
T 3i2n_A 145 DPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYD-----------------NGDIKLFDLRNMALRWETN 207 (357)
T ss_dssp CTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEET-----------------TSEEEEEETTTTEEEEEEE
T ss_pred eCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEcc-----------------CCeEEEEECccCceeeecC
Confidence 6 332 44443221 3555666 5678876665432 5689999998887654443
Q ss_pred cccccccEEEeC---CCCEEEEEeCCCCeEEEEEeCCCC-CcceeEe-cccCCCCcCceEECCCCC-EEEEe
Q 018474 188 GFYFANGIALSK---NEDFVVVCESWKFRCRRYWLKGDR-AGILDAF-IENLPGGPDNINLAPDGS-FWIGL 253 (355)
Q Consensus 188 ~~~~pngi~~~~---dg~~l~v~~~~~~~i~~~~~~~~~-~~~~~~~-~~~~~g~p~~i~~d~~G~-lwv~~ 253 (355)
.......++++| +++.++.+ ...+.|..|+++... ....... ..........+.+.++|+ +.++.
T Consensus 208 ~~~~v~~~~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 278 (357)
T 3i2n_A 208 IKNGVCSLEFDRKDISMNKLVAT-SLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTA 278 (357)
T ss_dssp CSSCEEEEEESCSSSSCCEEEEE-ESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEE
T ss_pred CCCceEEEEcCCCCCCCCEEEEE-CCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEE
Confidence 344567889999 88866665 456789999885422 1111110 012223345577888887 44444
No 225
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=98.39 E-value=0.00017 Score=64.99 Aligned_cols=158 Identities=11% Similarity=0.098 Sum_probs=102.6
Q ss_pred EecCCCCCCCceEEEeeC----CCeEEEEecCCEEEEEEcCCCeeE-Eee---c--cCCCcccCeEECCC----CCEEEE
Q 018474 45 KLGEGCVNHPEDVSVVVS----KGALYTATRDGWVKYFILHNETLV-NWK---H--IDSQSLLGLTTTKD----GGVILC 110 (355)
Q Consensus 45 ~~~~~~~~~p~~i~~d~~----~g~l~~~~~~g~i~~~~~~~g~~~-~~~---~--~~~~p~~gl~~d~~----g~L~v~ 110 (355)
.+..+.-....++++.|. +..++++..++.|..++..+++.. .+. . ....+. .+++.++ |+++++
T Consensus 12 ~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~~l~~ 90 (366)
T 3k26_A 12 SLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFY-TCAWTYDSNTSHPLLAV 90 (366)
T ss_dssp EEECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEE-EEEEEECTTTCCEEEEE
T ss_pred EeecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEE-EEEeccCCCCCCCEEEE
Confidence 455555566778889852 455777777889999998765432 221 1 123456 7778766 555444
Q ss_pred eCCCc-EEEEc-CCC--eEEEcCCcCCcccEEEcc-CCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEe
Q 018474 111 DNEKG-LLKVT-EEG--VEAIVPDASFTNDVIAAS-DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVL 185 (355)
Q Consensus 111 ~~~~g-l~~~~-~~g--~~~~~~~~~~~~~l~~d~-dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~ 185 (355)
...+| +..++ .++ +..+......+.++.+.+ ++++.++.+. .+.+..||..+++....
T Consensus 91 ~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~-----------------dg~i~iwd~~~~~~~~~ 153 (366)
T 3k26_A 91 AGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSK-----------------DHALRLWNIQTDTLVAI 153 (366)
T ss_dssp EETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEET-----------------TSCEEEEETTTTEEEEE
T ss_pred ecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeC-----------------CCeEEEEEeecCeEEEE
Confidence 33444 55666 355 555544446789999999 7877666433 56788899887765544
Q ss_pred e----ccccccccEEEeCCCCEEEEEeCCCCeEEEEEeCC
Q 018474 186 H----EGFYFANGIALSKNEDFVVVCESWKFRCRRYWLKG 221 (355)
Q Consensus 186 ~----~~~~~pngi~~~~dg~~l~v~~~~~~~i~~~~~~~ 221 (355)
. ........++++|+++.++.+. ..+.|..|+++.
T Consensus 154 ~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~i~d~~~ 192 (366)
T 3k26_A 154 FGGVEGHRDEVLSADYDLLGEKIMSCG-MDHSLKLWRINS 192 (366)
T ss_dssp ECSTTSCSSCEEEEEECTTSSEEEEEE-TTSCEEEEESCS
T ss_pred ecccccccCceeEEEECCCCCEEEEec-CCCCEEEEECCC
Confidence 3 2233457789999999665554 567899999754
No 226
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=98.38 E-value=0.00078 Score=60.03 Aligned_cols=187 Identities=14% Similarity=0.169 Sum_probs=106.0
Q ss_pred CCCCCCCceEEEeeCC-CeEEEEecCCEEEEEEcCCCee-----E-EeeccCCCcccCeEECCCCCEEEEeCCCcEEE-E
Q 018474 48 EGCVNHPEDVSVVVSK-GALYTATRDGWVKYFILHNETL-----V-NWKHIDSQSLLGLTTTKDGGVILCDNEKGLLK-V 119 (355)
Q Consensus 48 ~~~~~~p~~i~~d~~~-g~l~~~~~~g~i~~~~~~~g~~-----~-~~~~~~~~p~~gl~~d~~g~L~v~~~~~gl~~-~ 119 (355)
.|.-..-.+|++.|++ ..|..++.||.|..+|..+++. . .+......+. .+++.++|++.++...++.++ .
T Consensus 35 ~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~-~~~~s~dg~~l~s~~~d~~i~~~ 113 (340)
T 4aow_A 35 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVS-DVVISSDGQFALSGSWDGTLRLW 113 (340)
T ss_dssp CCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEE-EEEECTTSSEEEEEETTSEEEEE
T ss_pred CCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEE-EEEECCCCCEEEEEcccccceEE
Confidence 4555667889998664 4677788899999998755431 1 1111134466 889999998766554555444 4
Q ss_pred cC-CC--eEEEcCCcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeecc--cccccc
Q 018474 120 TE-EG--VEAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEG--FYFANG 194 (355)
Q Consensus 120 ~~-~g--~~~~~~~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~--~~~png 194 (355)
+. .+ .................+++...++.+. .+.+..||............ ......
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~-----------------d~~~~~~d~~~~~~~~~~~~~~~~~v~~ 176 (340)
T 4aow_A 114 DLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSR-----------------DKTIKLWNTLGVCKYTVQDESHSEWVSC 176 (340)
T ss_dssp ETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEET-----------------TSCEEEECTTSCEEEEECSSSCSSCEEE
T ss_pred eecccceeeeecCCCCceeEEEEeecCccceeecC-----------------CCeEEEEEeCCCceEEEEeccccCcccc
Confidence 43 33 2222222245555666777755554322 34566777654433322211 122345
Q ss_pred EEEeCCCC-EEEEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCCEEEEeec
Q 018474 195 IALSKNED-FVVVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIK 255 (355)
Q Consensus 195 i~~~~dg~-~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~ 255 (355)
+++++++. .++++....+.|..+++.... ....+. ...+....+.++++|++.++...
T Consensus 177 ~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~--~~~~~~-~h~~~v~~~~~s~~~~~l~s~s~ 235 (340)
T 4aow_A 177 VRFSPNSSNPIIVSCGWDKLVKVWNLANCK--LKTNHI-GHTGYLNTVTVSPDGSLCASGGK 235 (340)
T ss_dssp EEECSCSSSCEEEEEETTSCEEEEETTTTE--EEEEEC-CCSSCEEEEEECTTSSEEEEEET
T ss_pred eEEccCCCCcEEEEEcCCCEEEEEECCCCc--eeeEec-CCCCcEEEEEECCCCCEEEEEeC
Confidence 67777654 345555556778888875422 112222 22333455788999987776544
No 227
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=98.37 E-value=0.0011 Score=58.94 Aligned_cols=239 Identities=11% Similarity=0.080 Sum_probs=133.5
Q ss_pred CCCCCCceEEEeeCCCeEEEEecCCEEEEEEcCCCeeEEeecc-CCCcccCeEECCCCCEEEEeCCCc-EEEEcCCC--e
Q 018474 49 GCVNHPEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHI-DSQSLLGLTTTKDGGVILCDNEKG-LLKVTEEG--V 124 (355)
Q Consensus 49 ~~~~~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~~~~-~~~p~~gl~~d~~g~L~v~~~~~g-l~~~~~~g--~ 124 (355)
+.-....++++.+++..++++..++.|..++...+........ ..... .....++++.+++...++ +..++..+ .
T Consensus 84 ~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~ 162 (340)
T 4aow_A 84 GHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVL-SVAFSSDNRQIVSGSRDKTIKLWNTLGVCK 162 (340)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEE-EEEECTTSSCEEEEETTSCEEEECTTSCEE
T ss_pred CCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCCCcee-EEEEeecCccceeecCCCeEEEEEeCCCce
Confidence 3345567888987777788889999999999876655433322 23344 556666776554433444 44445333 2
Q ss_pred EEEcCC--cCCcccEEEccCC--cEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeecc-ccccccEEEeC
Q 018474 125 EAIVPD--ASFTNDVIAASDG--TLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEG-FYFANGIALSK 199 (355)
Q Consensus 125 ~~~~~~--~~~~~~l~~d~dG--~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~-~~~pngi~~~~ 199 (355)
...... ...+..+.+.+++ .+.++.+. .+.+..||..+++......+ ....+.++++|
T Consensus 163 ~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~-----------------d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~ 225 (340)
T 4aow_A 163 YTVQDESHSEWVSCVRFSPNSSNPIIVSCGW-----------------DKLVKVWNLANCKLKTNHIGHTGYLNTVTVSP 225 (340)
T ss_dssp EEECSSSCSSCEEEEEECSCSSSCEEEEEET-----------------TSCEEEEETTTTEEEEEECCCSSCEEEEEECT
T ss_pred EEEEeccccCcccceEEccCCCCcEEEEEcC-----------------CCEEEEEECCCCceeeEecCCCCcEEEEEECC
Confidence 222211 2456667776654 34444322 45678888877765444332 23346789999
Q ss_pred CCCEEEEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCCEEEEeecCCchhhHhhhcchhHHHHHHhccc
Q 018474 200 NEDFVVVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPG 279 (355)
Q Consensus 200 dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (355)
|++.++. ....+.|..|++.... ....+. .......+.+.+++.+..+...
T Consensus 226 ~~~~l~s-~s~Dg~i~iwd~~~~~--~~~~~~--~~~~v~~~~~~~~~~~~~~~~d------------------------ 276 (340)
T 4aow_A 226 DGSLCAS-GGKDGQAMLWDLNEGK--HLYTLD--GGDIINALCFSPNRYWLCAATG------------------------ 276 (340)
T ss_dssp TSSEEEE-EETTCEEEEEETTTTE--EEEEEE--CSSCEEEEEECSSSSEEEEEET------------------------
T ss_pred CCCEEEE-EeCCCeEEEEEeccCc--eeeeec--CCceEEeeecCCCCceeeccCC------------------------
Confidence 9995554 4456789889875421 122121 1122344667777777666544
Q ss_pred hhhcccCCCCCCceEEEEEeCCCCeEEEEEECCC-----CCcccceeEEEEeC-CEEEEeecCCCeEEEeeCCC
Q 018474 280 LISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPD-----ATYISFVTSAAEFD-GNLYLASLQSNFIGILPLDG 347 (355)
Q Consensus 280 ~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~-----g~~~~~~~~~~~~~-g~L~v~~~~~~~i~~~~~~~ 347 (355)
+.|..+|.+.+.....+..+. ......++.+.... +++.++......|...++.+
T Consensus 277 -------------~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~t 337 (340)
T 4aow_A 277 -------------PSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTI 337 (340)
T ss_dssp -------------TEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC
T ss_pred -------------CEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCC
Confidence 346666763444444443211 01123456666543 44444444466777777643
No 228
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.37 E-value=5.2e-05 Score=75.05 Aligned_cols=153 Identities=14% Similarity=0.122 Sum_probs=98.9
Q ss_pred CCceEEEeeCCCeEEEEecC----------CEEEEEEcCC------CeeEEee-ccCCCcccCeEECCCCC-EEEEeCC-
Q 018474 53 HPEDVSVVVSKGALYTATRD----------GWVKYFILHN------ETLVNWK-HIDSQSLLGLTTTKDGG-VILCDNE- 113 (355)
Q Consensus 53 ~p~~i~~d~~~g~l~~~~~~----------g~i~~~~~~~------g~~~~~~-~~~~~p~~gl~~d~~g~-L~v~~~~- 113 (355)
...++++.|++..|+.+..+ ..|++++..+ ++.+.+. ....... ++++.+||+ |+++...
T Consensus 131 ~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~SpDG~~la~~~~~~ 209 (662)
T 3azo_A 131 RWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVT-GPRLSPDGRQAVWLAWDH 209 (662)
T ss_dssp EEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEEC-CCEECTTSSEEEEEEECT
T ss_pred cccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCCCccc-CceECCCCCEEEEEECCC
Confidence 35678888777778776654 5789999977 6666654 3334556 788999997 5444422
Q ss_pred -------CcEEEEc-C-CC----eEEEcCC-cCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCC
Q 018474 114 -------KGLLKVT-E-EG----VEAIVPD-ASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKL 179 (355)
Q Consensus 114 -------~gl~~~~-~-~g----~~~~~~~-~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~ 179 (355)
..|+.++ . +| .+.+... ...+.++.+++||++|++... .....|+++|+++
T Consensus 210 ~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~---------------~~~~~l~~~~~~~ 274 (662)
T 3azo_A 210 PRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDR---------------TGWWNLHRVDPAT 274 (662)
T ss_dssp TCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECT---------------TSSCEEEEECTTT
T ss_pred CCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECC---------------CCCeEEEEEECCC
Confidence 2477777 4 34 2233322 256778899999998876543 1123799999888
Q ss_pred CeEEEeecccc-c--------cccEEEeCCCCEEEEEeCCCCeEEEEEeCC
Q 018474 180 KETTVLHEGFY-F--------ANGIALSKNEDFVVVCESWKFRCRRYWLKG 221 (355)
Q Consensus 180 ~~~~~~~~~~~-~--------pngi~~~~dg~~l~v~~~~~~~i~~~~~~~ 221 (355)
++.+.+..... . ...++++++++.++.+.....+|++++.++
T Consensus 275 ~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~ 325 (662)
T 3azo_A 275 GAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGKGAAVLGILDPES 325 (662)
T ss_dssp CCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBSSSCEEEEEETTT
T ss_pred CceeecccccccccCccccccCceEeEeCCCEEEEEEEcCccEEEEEECCC
Confidence 87766543211 1 246888899986555544445677777654
No 229
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.36 E-value=0.00016 Score=75.79 Aligned_cols=145 Identities=10% Similarity=0.124 Sum_probs=92.9
Q ss_pred ceEEEeeCCCeEEEEecCCEEE-EEEcCCCeeEEeeccCCCcccCeEECCCCCE-EEEeCCCcEEEEc-CCC-eEEEc-C
Q 018474 55 EDVSVVVSKGALYTATRDGWVK-YFILHNETLVNWKHIDSQSLLGLTTTKDGGV-ILCDNEKGLLKVT-EEG-VEAIV-P 129 (355)
Q Consensus 55 ~~i~~d~~~g~l~~~~~~g~i~-~~~~~~g~~~~~~~~~~~p~~gl~~d~~g~L-~v~~~~~gl~~~~-~~g-~~~~~-~ 129 (355)
.++++. ++..++.++.++.++ .++..+++...+......+. .+++.++|+. +++...+.++.++ .+| .+.+. .
T Consensus 341 ~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l~~~~~~~~-~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~ 418 (1045)
T 1k32_A 341 VRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVF-AMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERS 418 (1045)
T ss_dssp EEECSS-SEEEEEEEETTEEEEEEEETTTCCEEECCCCCCSEE-EEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred EeeeEc-CCCeEEEEECCCceEEEEECCCCCceEecCCcccee-eeEECCCCCEEEEECCCCeEEEEECCCCceEEeccC
Confidence 345555 455666666677888 88887777666543234567 8899999974 4455445688888 466 54443 3
Q ss_pred CcCCcccEEEccCCcEE-EEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeeccccccccEEEeCCCCEEEEEe
Q 018474 130 DASFTNDVIAASDGTLY-FTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYFANGIALSKNEDFVVVCE 208 (355)
Q Consensus 130 ~~~~~~~l~~d~dG~ly-~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~~~~pngi~~~~dg~~l~v~~ 208 (355)
....+.+++++|||+.. ++.....+ .. .......++.||.++++...+.........++++|||+.+++..
T Consensus 419 ~~~~v~~~~~SpDG~~la~~~~~~~~-----~~---~~~~~~~i~l~d~~~g~~~~l~~~~~~~~~~~~spdG~~l~~~s 490 (1045)
T 1k32_A 419 REAMITDFTISDNSRFIAYGFPLKHG-----ET---DGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLS 490 (1045)
T ss_dssp SSSCCCCEEECTTSCEEEEEEEECSS-----TT---CSCCEEEEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEEEE
T ss_pred CCCCccceEECCCCCeEEEEecCccc-----cc---cCCCCCeEEEEECCCCcEEEeeCCCcccCCceEcCCCCEEEEEe
Confidence 33556889999999643 33221000 00 00113479999998888665554444566789999999888876
Q ss_pred C
Q 018474 209 S 209 (355)
Q Consensus 209 ~ 209 (355)
.
T Consensus 491 ~ 491 (1045)
T 1k32_A 491 Y 491 (1045)
T ss_dssp S
T ss_pred c
Confidence 4
No 230
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=98.35 E-value=0.00027 Score=62.75 Aligned_cols=189 Identities=16% Similarity=0.120 Sum_probs=104.7
Q ss_pred ecCCCCCCCceEEEeeCCCeEEEEecCCEEEEEEcCCCe----e-EEeeccCCCcccCeEECC--CCCEEEEeCCCc-EE
Q 018474 46 LGEGCVNHPEDVSVVVSKGALYTATRDGWVKYFILHNET----L-VNWKHIDSQSLLGLTTTK--DGGVILCDNEKG-LL 117 (355)
Q Consensus 46 ~~~~~~~~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~----~-~~~~~~~~~p~~gl~~d~--~g~L~v~~~~~g-l~ 117 (355)
+..+.-..-.++++.+++..|++++.+|.|..++..++. . ..+......+. ++++.+ +++++++...+| +.
T Consensus 6 ~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~d~~~l~s~~~dg~v~ 84 (351)
T 3f3f_A 6 FDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIV-AIDWASPEYGRIIASASYDKTVK 84 (351)
T ss_dssp EECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEE-EEEECCGGGCSEEEEEETTSCEE
T ss_pred cCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEE-EEEEcCCCCCCEEEEEcCCCeEE
Confidence 334555667889999777778888999999999986552 2 12222234566 888887 477655544444 44
Q ss_pred EEc-CCC-----------eEEEcCCcCCcccEEEccC--CcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEE
Q 018474 118 KVT-EEG-----------VEAIVPDASFTNDVIAASD--GTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETT 183 (355)
Q Consensus 118 ~~~-~~g-----------~~~~~~~~~~~~~l~~d~d--G~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~ 183 (355)
.++ .++ ...+......+.+++++++ +.+.++... .+.+..||..+++..
T Consensus 85 vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~-----------------dg~v~iwd~~~~~~~ 147 (351)
T 3f3f_A 85 LWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGN-----------------DGILRLYDALEPSDL 147 (351)
T ss_dssp EEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET-----------------TCEEEEEECSSTTCT
T ss_pred EEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecC-----------------CCcEEEecCCChHHh
Confidence 455 232 2223223367888999998 876655332 456777776554311
Q ss_pred ----E--ee--------ccccccccEEEeCC---CCEEEEEeCCCCeEEEEEe-CCCCCcceeEecccCCCCcCceEECC
Q 018474 184 ----V--LH--------EGFYFANGIALSKN---EDFVVVCESWKFRCRRYWL-KGDRAGILDAFIENLPGGPDNINLAP 245 (355)
Q Consensus 184 ----~--~~--------~~~~~pngi~~~~d---g~~l~v~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~g~p~~i~~d~ 245 (355)
. .. ........++++|+ ++.+.++. ..+.+ .++. ..........+. ...+....+.+.+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~-~~~~~-~~~~~~~~~~~~~~~~~-~h~~~i~~~~~~p 224 (351)
T 3f3f_A 148 RSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSA-LEQAI-IYQRGKDGKLHVAAKLP-GHKSLIRSISWAP 224 (351)
T ss_dssp TCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEE-TTEEE-EEEECTTSCEEEEEECC-CCCSCEEEEEECC
T ss_pred ccccccccccccccccCCcccceeEEEeccCCCCCcEEEEec-CCCcE-EEEccCCCceeeeeecC-CCCcceeEEEECC
Confidence 0 00 11223457888887 77555554 34445 4443 222111111111 2222344567777
Q ss_pred CC----CEEEEeec
Q 018474 246 DG----SFWIGLIK 255 (355)
Q Consensus 246 ~G----~lwv~~~~ 255 (355)
+| ++.++...
T Consensus 225 ~~~~~~~~l~s~~~ 238 (351)
T 3f3f_A 225 SIGRWYQLIATGCK 238 (351)
T ss_dssp CSSCSSEEEEEEET
T ss_pred CCCCcceEEEEEcC
Confidence 76 45554443
No 231
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=98.35 E-value=0.00065 Score=59.91 Aligned_cols=236 Identities=11% Similarity=0.008 Sum_probs=133.1
Q ss_pred CceEEEeeCCCeEEEEecCCEEEEEEcCCCeeEEeeccCCCcccCeEECCCCCEEEEeCCCcEEEE-c-CCC---eEEEc
Q 018474 54 PEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGGVILCDNEKGLLKV-T-EEG---VEAIV 128 (355)
Q Consensus 54 p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~~~~~~~p~~gl~~d~~g~L~v~~~~~gl~~~-~-~~g---~~~~~ 128 (355)
-.++++.+++..+.+++.+|.|..++..+++....... .... ...+..++.+.++....+..++ + ..+ +..+.
T Consensus 70 V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~-h~~~-~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~ 147 (318)
T 4ggc_A 70 ISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTS-HSAR-VGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLS 147 (318)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC-CSSC-EEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEE
T ss_pred EEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecC-ccce-EEEeecCCCEEEEEecCCceEeeecCCCceeEEEEc
Confidence 45788997777788899999999999988876543322 1111 2233344555554444454444 3 233 34444
Q ss_pred CCcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEE-----EeeccccccccEEEeCCCCE
Q 018474 129 PDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETT-----VLHEGFYFANGIALSKNEDF 203 (355)
Q Consensus 129 ~~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~-----~~~~~~~~pngi~~~~dg~~ 203 (355)
.....+..+...++|+..++... .+.+..||..+++.. ...........+++++++..
T Consensus 148 ~~~~~~~~~~~~~~~~~l~s~~~-----------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 210 (318)
T 4ggc_A 148 GHSQEVCGLRWAPDGRHLASGGN-----------------DNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSN 210 (318)
T ss_dssp CCSSCEEEEEECTTSSEEEEEET-----------------TSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTT
T ss_pred CccCceEEEEEcCCCCEEEEEec-----------------CcceeEEECCCCcccccceeeecccCCceEEEEecCCCCc
Confidence 33356777888888876665433 456777776654311 11111122345667776654
Q ss_pred EEEE--eCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCCEEEEeecCCchhhHhhhcchhHHHHHHhccchh
Q 018474 204 VVVC--ESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLI 281 (355)
Q Consensus 204 l~v~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (355)
++.. ....+.|..++...... .... ........+.+.++++..+...+
T Consensus 211 ~~~~~~~~~~~~i~lwd~~~~~~--~~~~--~~~~~v~~~~~~~~~~~~~~~sg-------------------------- 260 (318)
T 4ggc_A 211 VLATGGGTSDRHIRIWNVCSGAC--LSAV--DAHSQVCSILWSPHYKELISGHG-------------------------- 260 (318)
T ss_dssp EEEEEECTTTCEEEEEETTTCCE--EEEE--ECSSCEEEEEEETTTTEEEEEEC--------------------------
T ss_pred EEEEEecCCCCEEEEEecccccc--cccc--cceeeeeeeeecccccceEEEEE--------------------------
Confidence 4432 33345566666543211 1111 11112334556677765554432
Q ss_pred hcccCCCCCCceEEEEEeCCCCeEEEEEECCCCCcccceeEEEEe-CCEEEEeecCCCeEEEeeCCCCCC
Q 018474 282 SLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF-DGNLYLASLQSNFIGILPLDGPEP 350 (355)
Q Consensus 282 ~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-~g~L~v~~~~~~~i~~~~~~~~~~ 350 (355)
...+.|..+|..+++.+..+..+.+ .++.+... ++++.++......|...++....|
T Consensus 261 --------~~d~~i~iwd~~~~~~~~~l~gH~~----~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~dP 318 (318)
T 4ggc_A 261 --------FAQNQLVIWKYPTMAKVAELKGHTS----RVLSLTMSPDGATVASAAADETLRLWRCFELDP 318 (318)
T ss_dssp --------TTTCCEEEEETTTCCEEEEECCCSS----CEEEEEECTTSSCEEEEETTTEEEEECCSCCCC
T ss_pred --------cCCCEEEEEECCCCcEEEEEcCCCC----CEEEEEEcCCCCEEEEEecCCeEEEEECCCCCC
Confidence 1124577788768888888876554 46667665 355555555577888888876554
No 232
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.34 E-value=1.1e-05 Score=78.83 Aligned_cols=174 Identities=12% Similarity=0.070 Sum_probs=107.4
Q ss_pred CCceEEEeeCCC-eEEEEecCCEEEEEEcCCCeeEEeeccCCCcccCeEECCCCCEEEEe-CC----CcEEEEc-CCC-e
Q 018474 53 HPEDVSVVVSKG-ALYTATRDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGGVILCD-NE----KGLLKVT-EEG-V 124 (355)
Q Consensus 53 ~p~~i~~d~~~g-~l~~~~~~g~i~~~~~~~g~~~~~~~~~~~p~~gl~~d~~g~L~v~~-~~----~gl~~~~-~~g-~ 124 (355)
+....++.++++ .+|++..++.+..+|.++++.+.+..... . .+++++||+.++.. .. ..|+.++ .+| .
T Consensus 111 ~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~--~-~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~ 187 (582)
T 3o4h_A 111 PMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG--F-GFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGL 187 (582)
T ss_dssp SBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS--C-EEEEEEETTEEEEEEEEETTEEEEEEEETTTCCC
T ss_pred CceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC--c-eEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCc
Confidence 344556665554 45665555666788888888776654322 5 78899999876632 22 2478888 466 7
Q ss_pred EEEcCCcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeecc-ccccccEE-------
Q 018474 125 EAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEG-FYFANGIA------- 196 (355)
Q Consensus 125 ~~~~~~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~-~~~pngi~------- 196 (355)
+.+.......++++++|||+..++... .....|+++|.++++.+ ...+ ......++
T Consensus 188 ~~l~~~~~~~~~~~~SpDG~~l~~~~~---------------~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 251 (582)
T 3o4h_A 188 RVFDSGEGSFSSASISPGMKVTAGLET---------------AREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWL 251 (582)
T ss_dssp EEECCSSCEEEEEEECTTSCEEEEEEC---------------SSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEE
T ss_pred eEeecCCCccccceECCCCCEEEEccC---------------CCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccce
Confidence 666655456788999999964443222 11237999999988877 4332 22234455
Q ss_pred -EeCCCCEEEEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCCEEEEeec
Q 018474 197 -LSKNEDFVVVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIK 255 (355)
Q Consensus 197 -~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~ 255 (355)
++|||+ ++++....+.+..|.+ |. ... ...+....+.++ +|++++....
T Consensus 252 ~~spdg~-~~~~~~~~g~~~l~~~-g~----~~~---~~~~~v~~~~~s-dg~~l~~~s~ 301 (582)
T 3o4h_A 252 GYLPDGR-LAVVARREGRSAVFID-GE----RVE---APQGNHGRVVLW-RGKLVTSHTS 301 (582)
T ss_dssp EECTTSC-EEEEEEETTEEEEEET-TE----EEC---CCSSEEEEEEEE-TTEEEEEEEE
T ss_pred eEcCCCc-EEEEEEcCCcEEEEEE-CC----eec---cCCCceEEEEec-CCEEEEEEcC
Confidence 999995 7777666777777776 31 111 111223456677 7876655443
No 233
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=98.33 E-value=0.00013 Score=65.86 Aligned_cols=100 Identities=9% Similarity=0.021 Sum_probs=64.1
Q ss_pred CCCCCCCceEEEeeCC---CeEEEEecCCEEEEEEcCC-CeeE--EeeccCCCcccCeEECCCCCEEEEeCCCc-EEEEc
Q 018474 48 EGCVNHPEDVSVVVSK---GALYTATRDGWVKYFILHN-ETLV--NWKHIDSQSLLGLTTTKDGGVILCDNEKG-LLKVT 120 (355)
Q Consensus 48 ~~~~~~p~~i~~d~~~---g~l~~~~~~g~i~~~~~~~-g~~~--~~~~~~~~p~~gl~~d~~g~L~v~~~~~g-l~~~~ 120 (355)
.+.-..-.++++.+++ ..|++++.+|.|..++..+ +... .+......+. .+++.++++++++...+| +..++
T Consensus 36 ~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~s~~~dg~v~iwd 114 (368)
T 3mmy_A 36 SSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVL-DVCWSDDGSKVFTASCDKTAKMWD 114 (368)
T ss_dssp SCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEE-EEEECTTSSEEEEEETTSEEEEEE
T ss_pred cCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEE-EEEECcCCCEEEEEcCCCcEEEEE
Confidence 3445667889999663 6677888899999999876 4332 2322345577 899999987655544445 55556
Q ss_pred -CCC-eEEEcCCcCCcccEEE--ccCCcEEEE
Q 018474 121 -EEG-VEAIVPDASFTNDVIA--ASDGTLYFT 148 (355)
Q Consensus 121 -~~g-~~~~~~~~~~~~~l~~--d~dG~ly~~ 148 (355)
.++ ...+......+.++.+ +++|++.++
T Consensus 115 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~ 146 (368)
T 3mmy_A 115 LSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMT 146 (368)
T ss_dssp TTTTEEEEEEECSSCEEEEEEEECSSCEEEEE
T ss_pred cCCCCceeeccccCceEEEEEEeCCCCCEEEE
Confidence 355 3333333356777877 777765544
No 234
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=98.33 E-value=0.0012 Score=59.57 Aligned_cols=184 Identities=13% Similarity=0.105 Sum_probs=108.4
Q ss_pred CCCCCCceEEE-----ee-CCCeEEEEecCCEEEEEEcCCCe-------eE-EeeccCCCcccCeEECCCCCEEEEeCCC
Q 018474 49 GCVNHPEDVSV-----VV-SKGALYTATRDGWVKYFILHNET-------LV-NWKHIDSQSLLGLTTTKDGGVILCDNEK 114 (355)
Q Consensus 49 ~~~~~p~~i~~-----d~-~~g~l~~~~~~g~i~~~~~~~g~-------~~-~~~~~~~~p~~gl~~d~~g~L~v~~~~~ 114 (355)
|.-..-.++++ .+ ++..|..++.|+.|..++..+++ .. .+......+. .+++.+++.+.++...+
T Consensus 19 gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~-~~~~~~~~~~l~s~s~D 97 (343)
T 2xzm_R 19 GHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVS-DLALSQENCFAISSSWD 97 (343)
T ss_dssp CCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEE-EEEECSSTTEEEEEETT
T ss_pred cchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceE-EEEECCCCCEEEEEcCC
Confidence 43344466776 43 45667788889999999875432 11 1111123456 78999999877665555
Q ss_pred cEEEE-c-CCC--eEEEcCCcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeec---
Q 018474 115 GLLKV-T-EEG--VEAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHE--- 187 (355)
Q Consensus 115 gl~~~-~-~~g--~~~~~~~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~--- 187 (355)
+.+++ + .++ +..+......+.+++++++|+..++.+. .+.+..||..+........
T Consensus 98 ~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~-----------------d~~i~~wd~~~~~~~~~~~~~~ 160 (343)
T 2xzm_R 98 KTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGA-----------------EREIKLWNILGECKFSSAEKEN 160 (343)
T ss_dssp SEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEET-----------------TSCEEEEESSSCEEEECCTTTS
T ss_pred CcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcC-----------------CCEEEEEeccCCceeeeecccC
Confidence 65544 5 455 5555544467889999999976665433 4567777765433322221
Q ss_pred cccccccEEEeCCC----------CEEEEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCCEEEEeec
Q 018474 188 GFYFANGIALSKNE----------DFVVVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIK 255 (355)
Q Consensus 188 ~~~~pngi~~~~dg----------~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~ 255 (355)
.......++++|++ . .+++....+.|..|+.+. .....+. ...+....+.++++|++.++...
T Consensus 161 ~~~~v~~~~~~~~~~~~~~~~~~~~-~l~s~~~d~~i~iwd~~~---~~~~~~~-~h~~~v~~~~~s~~g~~l~sgs~ 233 (343)
T 2xzm_R 161 HSDWVSCVRYSPIMKSANKVQPFAP-YFASVGWDGRLKVWNTNF---QIRYTFK-AHESNVNHLSISPNGKYIATGGK 233 (343)
T ss_dssp CSSCEEEEEECCCCCSCSCCCSSCC-EEEEEETTSEEEEEETTT---EEEEEEE-CCSSCEEEEEECTTSSEEEEEET
T ss_pred CCceeeeeeeccccccccccCCCCC-EEEEEcCCCEEEEEcCCC---ceeEEEc-CccccceEEEECCCCCEEEEEcC
Confidence 11223457777776 4 445555677888888422 1112222 22333456788999987766544
No 235
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=98.33 E-value=0.00011 Score=67.37 Aligned_cols=157 Identities=9% Similarity=-0.005 Sum_probs=96.5
Q ss_pred ecCCCCCCCceEEEee-CCCeEEEEecCCEEEEEEcCCCeeEEeec--------------cCCCcccCeEECC-CCCEEE
Q 018474 46 LGEGCVNHPEDVSVVV-SKGALYTATRDGWVKYFILHNETLVNWKH--------------IDSQSLLGLTTTK-DGGVIL 109 (355)
Q Consensus 46 ~~~~~~~~p~~i~~d~-~~g~l~~~~~~g~i~~~~~~~g~~~~~~~--------------~~~~p~~gl~~d~-~g~L~v 109 (355)
+..+.-..-.++++.+ ++..|++++.+|.|..++..+++...... ....+. .+++.+ ++++++
T Consensus 38 ~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~l~ 116 (408)
T 4a11_B 38 VERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVE-TVQWYPHDTGMFT 116 (408)
T ss_dssp ECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEE-EEEECTTCTTCEE
T ss_pred eeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEE-EEEEccCCCcEEE
Confidence 3344445668899997 67778888899999999987664321111 223456 788887 555554
Q ss_pred EeCCCc-EEEEc-CCC--eEEEcCCcCCcccEEEcc---CCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeE
Q 018474 110 CDNEKG-LLKVT-EEG--VEAIVPDASFTNDVIAAS---DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKET 182 (355)
Q Consensus 110 ~~~~~g-l~~~~-~~g--~~~~~~~~~~~~~l~~d~---dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~ 182 (355)
+....| +..++ .++ ...+.. ...+..+.+.+ ++.+.++... .+.+..||..+++.
T Consensus 117 s~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~v~~~d~~~~~~ 178 (408)
T 4a11_B 117 SSSFDKTLKVWDTNTLQTADVFNF-EETVYSHHMSPVSTKHCLVAVGTR-----------------GPKVQLCDLKSGSC 178 (408)
T ss_dssp EEETTSEEEEEETTTTEEEEEEEC-SSCEEEEEECSSCSSCCEEEEEES-----------------SSSEEEEESSSSCC
T ss_pred EEeCCCeEEEeeCCCCccceeccC-CCceeeeEeecCCCCCcEEEEEcC-----------------CCeEEEEeCCCcce
Confidence 443444 55556 355 333322 24556666665 3335444322 45788888776653
Q ss_pred EEeec-cccccccEEEeCCCCEEEEEeCCCCeEEEEEeCC
Q 018474 183 TVLHE-GFYFANGIALSKNEDFVVVCESWKFRCRRYWLKG 221 (355)
Q Consensus 183 ~~~~~-~~~~pngi~~~~dg~~l~v~~~~~~~i~~~~~~~ 221 (355)
..... .......++++|+++.++++....+.|..|+++.
T Consensus 179 ~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~ 218 (408)
T 4a11_B 179 SHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRR 218 (408)
T ss_dssp CEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTC
T ss_pred eeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCC
Confidence 32222 2334567899999986666666678899999854
No 236
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=98.33 E-value=0.00044 Score=64.49 Aligned_cols=246 Identities=10% Similarity=0.105 Sum_probs=140.0
Q ss_pred EecCCCCCCCceEEEee-CCCeEEEEecCCEEEEEEcCC---Ce----eEEeeccCCCcccCeEECCCCCEEEEeCCCc-
Q 018474 45 KLGEGCVNHPEDVSVVV-SKGALYTATRDGWVKYFILHN---ET----LVNWKHIDSQSLLGLTTTKDGGVILCDNEKG- 115 (355)
Q Consensus 45 ~~~~~~~~~p~~i~~d~-~~g~l~~~~~~g~i~~~~~~~---g~----~~~~~~~~~~p~~gl~~d~~g~L~v~~~~~g- 115 (355)
.+..+.-..-.++++.+ ++..|.+++.+|.|..++..+ +. ...+ .....+. ++++.++++++++...+|
T Consensus 57 ~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~-~~~~~~~~~~l~s~s~dg~ 134 (437)
T 3gre_A 57 TLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVT-QITMIPNFDAFAVSSKDGQ 134 (437)
T ss_dssp EECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEE-EEEECTTSSEEEEEETTSE
T ss_pred eeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEE-EEEEeCCCCEEEEEeCCCE
Confidence 34344446678999997 567788888999999999754 32 1122 2234567 899998887655544445
Q ss_pred EEEEcC----CC--eEEEcCC------------cCCcccEE--EccCCcEEEEeCCCCCCCccccccccccCCCCeEEEE
Q 018474 116 LLKVTE----EG--VEAIVPD------------ASFTNDVI--AASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKY 175 (355)
Q Consensus 116 l~~~~~----~g--~~~~~~~------------~~~~~~l~--~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~ 175 (355)
+..++. ++ .+..... ...+..+. ..+++.+.++. ...+.+..|
T Consensus 135 i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----------------~~d~~i~iw 197 (437)
T 3gre_A 135 IIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVAL-----------------TNLSRVIIF 197 (437)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEE-----------------ETTSEEEEE
T ss_pred EEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEE-----------------eCCCeEEEE
Confidence 333331 33 2211111 01122222 33455544443 225789999
Q ss_pred eCCCCeEEEeecc---ccccccEEEeCCCCEEEEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCce----EECCCCC
Q 018474 176 DPKLKETTVLHEG---FYFANGIALSKNEDFVVVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNI----NLAPDGS 248 (355)
Q Consensus 176 dp~~~~~~~~~~~---~~~pngi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i----~~d~~G~ 248 (355)
|..+++....... ......++++|+++.++.+ ...+.|..|+++... ....+.-........+ .++++|.
T Consensus 198 d~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~-~~dg~i~iwd~~~~~--~~~~~~~~~~~~v~~~~~~~~~s~~~~ 274 (437)
T 3gre_A 198 DIRTLERLQIIENSPRHGAVSSICIDEECCVLILG-TTRGIIDIWDIRFNV--LIRSWSFGDHAPITHVEVCQFYGKNSV 274 (437)
T ss_dssp ETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEE-ETTSCEEEEETTTTE--EEEEEBCTTCEEEEEEEECTTTCTTEE
T ss_pred eCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEE-cCCCeEEEEEcCCcc--EEEEEecCCCCceEEEEeccccCCCcc
Confidence 9877765433322 3456789999999865555 456789999975421 1111110111112234 2335565
Q ss_pred EEEEeecCCchhhHhhhcchhHHHHHHhccchhhcccCCCCCCceEEEEEeCCCCeEEEEEECCCCC-------------
Q 018474 249 FWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDAT------------- 315 (355)
Q Consensus 249 lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~------------- 315 (355)
+.++... .+.|..+|..+++....+....+.
T Consensus 275 ~l~s~~~------------------------------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 318 (437)
T 3gre_A 275 IVVGGSS------------------------------------KTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGL 318 (437)
T ss_dssp EEEEEST------------------------------------TEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSG
T ss_pred EEEEEcC------------------------------------CCcEEEEEcCCCcEEEEEEcCCCCCccceeccccccc
Confidence 5554432 245777787568877777654321
Q ss_pred ---------cccceeEEEEeCCEEEEeecCCCeEEEeeCCCC
Q 018474 316 ---------YISFVTSAAEFDGNLYLASLQSNFIGILPLDGP 348 (355)
Q Consensus 316 ---------~~~~~~~~~~~~g~L~v~~~~~~~i~~~~~~~~ 348 (355)
....++.+...++++.++.-....|...++...
T Consensus 319 ~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~~wd~~~~ 360 (437)
T 3gre_A 319 EELNFCGIRSLNALSTISVSNDKILLTDEATSSIVMFSLNEL 360 (437)
T ss_dssp GGCCCCCCCSGGGGCCEEEETTEEEEEEGGGTEEEEEETTCG
T ss_pred ccceecccccCCceEEEEECCceEEEecCCCCeEEEEECCCc
Confidence 122355566667776676666888998887654
No 237
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=98.31 E-value=2.4e-05 Score=72.26 Aligned_cols=184 Identities=11% Similarity=0.025 Sum_probs=107.4
Q ss_pred CCCceEEEeeCCC-eEEEE----------ecCCEEEEEEcCCCeeE---EeeccCCCcccCeEECCCCCEEEE-eCCCcE
Q 018474 52 NHPEDVSVVVSKG-ALYTA----------TRDGWVKYFILHNETLV---NWKHIDSQSLLGLTTTKDGGVILC-DNEKGL 116 (355)
Q Consensus 52 ~~p~~i~~d~~~g-~l~~~----------~~~g~i~~~~~~~g~~~---~~~~~~~~p~~gl~~d~~g~L~v~-~~~~gl 116 (355)
....++++.|++. .++++ ..++.|..++..+++.. ........+. .+++.++|+++++ ...+.+
T Consensus 13 ~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~-~~~~s~~~~~l~~~~~dg~v 91 (416)
T 2pm9_A 13 SRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFN-DLDWSHNNKIIAGALDNGSL 91 (416)
T ss_dssp EESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEE-EEEECSSSSCEEEEESSSCE
T ss_pred hhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceE-EEEECCCCCeEEEEccCCeE
Confidence 3455677875554 56666 56788999998766421 1112234566 8999988875554 433445
Q ss_pred EEEc-CC---C---eEEEcCCcCCcccEEEccC-CcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCe------E
Q 018474 117 LKVT-EE---G---VEAIVPDASFTNDVIAASD-GTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKE------T 182 (355)
Q Consensus 117 ~~~~-~~---g---~~~~~~~~~~~~~l~~d~d-G~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~------~ 182 (355)
..++ .+ + ...+......+.+++++++ ++++++.+. .+.+..||..+++ .
T Consensus 92 ~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~-----------------dg~v~iwd~~~~~~~~~~~~ 154 (416)
T 2pm9_A 92 ELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGN-----------------NGEIFIWDMNKCTESPSNYT 154 (416)
T ss_dssp EEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECS-----------------SSCEEBCBTTTTSSCTTTCC
T ss_pred EEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcC-----------------CCeEEEEECCCCcccccccc
Confidence 5555 33 2 3333333367889999998 676666433 4567777776654 1
Q ss_pred EEe----eccccccccEEEeCCCCEEEEEeCCCCeEEEEEeCCCCCcceeEecccC-----CCCcCceEECCCC-CEEEE
Q 018474 183 TVL----HEGFYFANGIALSKNEDFVVVCESWKFRCRRYWLKGDRAGILDAFIENL-----PGGPDNINLAPDG-SFWIG 252 (355)
Q Consensus 183 ~~~----~~~~~~pngi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~-----~g~p~~i~~d~~G-~lwv~ 252 (355)
... .........+++++++..++++....+.|..|+++..+ ....+.... ......+.++++| +++++
T Consensus 155 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 232 (416)
T 2pm9_A 155 PLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKK--EVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVAT 232 (416)
T ss_dssp CBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTE--EEEEECCCCCSSCCCCCEEEEEECSSCTTEEEE
T ss_pred ccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCC--cceEEeccccccccCCceEEEEECCCCCCEEEE
Confidence 111 11223456899999944366666667889999985432 111221110 2234557788887 45555
Q ss_pred eec
Q 018474 253 LIK 255 (355)
Q Consensus 253 ~~~ 255 (355)
...
T Consensus 233 ~~~ 235 (416)
T 2pm9_A 233 ATG 235 (416)
T ss_dssp EEC
T ss_pred EEC
Confidence 443
No 238
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.28 E-value=0.00077 Score=67.49 Aligned_cols=186 Identities=8% Similarity=0.024 Sum_probs=104.7
Q ss_pred ceEEEeeCCCeEEEEec-CC----EEEEEEcCCCeeEEeeccCCCcccCeEECCCCC-EEEEeCCCc-------------
Q 018474 55 EDVSVVVSKGALYTATR-DG----WVKYFILHNETLVNWKHIDSQSLLGLTTTKDGG-VILCDNEKG------------- 115 (355)
Q Consensus 55 ~~i~~d~~~g~l~~~~~-~g----~i~~~~~~~g~~~~~~~~~~~p~~gl~~d~~g~-L~v~~~~~g------------- 115 (355)
.++++.|++..|..+.. +| .|+.+|..+|+............ ++++.+||+ |+++.....
T Consensus 128 ~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~-~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~ 206 (710)
T 2xdw_A 128 RGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFS-CMAWTHDGKGMFYNAYPQQDGKSDGTETSTNL 206 (710)
T ss_dssp EEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSC-CEEECTTSSEEEEEECCCCSSCCSSSCCCCCC
T ss_pred EEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcccc-eEEEEeCCCEEEEEEECCccccccccccccCC
Confidence 46778866666655443 33 79999998888765322222345 789998986 666554333
Q ss_pred ---EEEEcC-CC-e--EEEcCC---cCCcccEEEccCCc-EEEEeCCCCCCCccccccccccCCCCeEEEEeCCC-----
Q 018474 116 ---LLKVTE-EG-V--EAIVPD---ASFTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKL----- 179 (355)
Q Consensus 116 ---l~~~~~-~g-~--~~~~~~---~~~~~~l~~d~dG~-ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~----- 179 (355)
+++++. ++ . ..+... ..+..++.+++||+ |.++.... ......++.+|.++
T Consensus 207 ~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~-------------~~~~~~l~~~d~~~~~~~~ 273 (710)
T 2xdw_A 207 HQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREG-------------CDPVNRLWYCDLQQESNGI 273 (710)
T ss_dssp CCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECS-------------SSSCCEEEEEEGGGSSSSS
T ss_pred CCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEcc-------------CCCccEEEEEECccccccc
Confidence 777763 43 1 233222 13456788999995 55543210 01134688888765
Q ss_pred -C--eEEEeeccccccccEEEeCCCCEEEEEeCC---CCeEEEEEeCCCCCcceeEecccCC-CCcCceEECCCCCEEEE
Q 018474 180 -K--ETTVLHEGFYFANGIALSKNEDFVVVCESW---KFRCRRYWLKGDRAGILDAFIENLP-GGPDNINLAPDGSFWIG 252 (355)
Q Consensus 180 -~--~~~~~~~~~~~pngi~~~~dg~~l~v~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~-g~p~~i~~d~~G~lwv~ 252 (355)
+ +.+.+..... ...-.+++||+.+|+.... ..+|+++++++......+.+..... ....++...+++.++++
T Consensus 274 ~~~~~~~~l~~~~~-~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~ 352 (710)
T 2xdw_A 274 TGILKWVKLIDNFE-GEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLC 352 (710)
T ss_dssp CSSCCCEEEECSSS-SCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEE
T ss_pred CCccceEEeeCCCC-cEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEE
Confidence 4 3444443322 2223588999988887643 3479999986543222333432222 12334555545666665
Q ss_pred eec
Q 018474 253 LIK 255 (355)
Q Consensus 253 ~~~ 255 (355)
...
T Consensus 353 ~~~ 355 (710)
T 2xdw_A 353 YLH 355 (710)
T ss_dssp EEE
T ss_pred EEE
Confidence 543
No 239
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=98.28 E-value=0.00024 Score=65.29 Aligned_cols=186 Identities=9% Similarity=0.040 Sum_probs=116.6
Q ss_pred CCCCCceEEEeeCCCeEEEEecC----------------CEEEEEEcCCC--eeE-Eeecc------CCCcccCeEEC-C
Q 018474 50 CVNHPEDVSVVVSKGALYTATRD----------------GWVKYFILHNE--TLV-NWKHI------DSQSLLGLTTT-K 103 (355)
Q Consensus 50 ~~~~p~~i~~d~~~g~l~~~~~~----------------g~i~~~~~~~g--~~~-~~~~~------~~~p~~gl~~d-~ 103 (355)
.+...-.+.+| ..++||+-... -+|+.+|.+++ +.. ++... ..... .+++| .
T Consensus 85 ~lvsV~~v~iD-~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~-di~VD~~ 162 (381)
T 3q6k_A 85 ELTSIYQPVID-DCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFG-GFAVDVA 162 (381)
T ss_dssp SSSCEEEEEEC-TTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEE-EEEEEES
T ss_pred ceEEeeEEEEc-CCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccc-eEEEecc
Confidence 36778889999 68889974321 26889999988 654 33211 12244 67888 2
Q ss_pred -------CCCEEEEeCC-CcEEEEc-CCC--eEEEcCC----c--------------CCcccEEEccC----C-cEEEEe
Q 018474 104 -------DGGVILCDNE-KGLLKVT-EEG--VEAIVPD----A--------------SFTNDVIAASD----G-TLYFTV 149 (355)
Q Consensus 104 -------~g~L~v~~~~-~gl~~~~-~~g--~~~~~~~----~--------------~~~~~l~~d~d----G-~ly~~d 149 (355)
++.+|++|.. .||+.++ .+| .+..... . ..+++|+.+++ + .||+.-
T Consensus 163 ~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~p 242 (381)
T 3q6k_A 163 NPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLA 242 (381)
T ss_dssp CTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEE
T ss_pred cCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEE
Confidence 4568999975 5799999 566 3333111 0 36677888876 4 688876
Q ss_pred CCCCCCCccccccccccCCCCeEEEEe------CC-CCeEEEeeccccccc--cEEEe-CCCCEEEEEeCCCCeEEEEEe
Q 018474 150 ASTKYTPTDFYKDMAEGKPYGQLRKYD------PK-LKETTVLHEGFYFAN--GIALS-KNEDFVVVCESWKFRCRRYWL 219 (355)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~g~l~~~d------p~-~~~~~~~~~~~~~pn--gi~~~-~dg~~l~v~~~~~~~i~~~~~ 219 (355)
.++ ..+|+.. +. ..+++.+.+...... +++++ .+| .+|+++...+.|.+++.
T Consensus 243 lss-----------------~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G-~ly~~~~~~~aI~~w~~ 304 (381)
T 3q6k_A 243 GSA-----------------IKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTK-VIFFAEANTKQVSCWNT 304 (381)
T ss_dssp SSC-----------------SEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTC-EEEEEESSSSEEEEEET
T ss_pred CCC-----------------CcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCC-eEEEEeccCCeEEEEeC
Confidence 542 1344332 10 123333333221233 45675 555 59999999999999998
Q ss_pred CC-CC-CcceeEecccC-CCCcCceEECCCCCEEEEeec
Q 018474 220 KG-DR-AGILDAFIENL-PGGPDNINLAPDGSFWIGLIK 255 (355)
Q Consensus 220 ~~-~~-~~~~~~~~~~~-~g~p~~i~~d~~G~lwv~~~~ 255 (355)
++ .- ....+.+.... --+|+++.+|.+|.+|+.+++
T Consensus 305 ~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~sn~ 343 (381)
T 3q6k_A 305 QKMPLRMKNTDVVYTSSRFVFGTDISVDSKGGLWFMSNG 343 (381)
T ss_dssp TSCSBCGGGEEEEEECTTCCSEEEEEECTTSCEEEEECS
T ss_pred CCCccccCceEEEEECCCccccCeEEECCCCeEEEEECc
Confidence 65 21 23444444322 236999999999999999876
No 240
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=98.28 E-value=0.00043 Score=62.61 Aligned_cols=185 Identities=12% Similarity=0.056 Sum_probs=107.1
Q ss_pred CCCceEEEeeC--CCeEEEEecCCEEEEEEcCCCeeEEe---eccCCCcccCeEECCC--CCEEEEeCCCc-EEEEc-CC
Q 018474 52 NHPEDVSVVVS--KGALYTATRDGWVKYFILHNETLVNW---KHIDSQSLLGLTTTKD--GGVILCDNEKG-LLKVT-EE 122 (355)
Q Consensus 52 ~~p~~i~~d~~--~g~l~~~~~~g~i~~~~~~~g~~~~~---~~~~~~p~~gl~~d~~--g~L~v~~~~~g-l~~~~-~~ 122 (355)
..-.++++.++ +..|++++.+|.|..++..+++.... ......+. .+++.++ ++++++....+ +..++ .+
T Consensus 56 ~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~l~~~~~d~~i~v~d~~~ 134 (379)
T 3jrp_A 56 GPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVN-SVQWAPHEYGPLLLVASSDGKVSVVEFKE 134 (379)
T ss_dssp SCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEE-EEEECCGGGCSEEEEEETTSEEEEEECCT
T ss_pred CcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceE-EEEeCCCCCCCEEEEecCCCcEEEEecCC
Confidence 44567888644 67788889999999999988863322 22234566 8889887 76555444444 55555 33
Q ss_pred C----eEEEcCCcCCcccEEEcc-------------CCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCe--EE
Q 018474 123 G----VEAIVPDASFTNDVIAAS-------------DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKE--TT 183 (355)
Q Consensus 123 g----~~~~~~~~~~~~~l~~d~-------------dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~--~~ 183 (355)
+ ...+......+..+++++ ++.+.++... .+.+..||..+++ ..
T Consensus 135 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-----------------dg~i~i~d~~~~~~~~~ 197 (379)
T 3jrp_A 135 NGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGA-----------------DNLVKIWKYNSDAQTYV 197 (379)
T ss_dssp TSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEET-----------------TSCEEEEEEETTTTEEE
T ss_pred CCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeC-----------------CCeEEEEEecCCCccee
Confidence 2 222323335678888888 5665555332 4567777654432 11
Q ss_pred Ee---eccccccccEEEeCC---CCEEEEEeCCCCeEEEEEeCCCCCcceeEeccc--CCCCcCceEECCCCCEEEEeec
Q 018474 184 VL---HEGFYFANGIALSKN---EDFVVVCESWKFRCRRYWLKGDRAGILDAFIEN--LPGGPDNINLAPDGSFWIGLIK 255 (355)
Q Consensus 184 ~~---~~~~~~pngi~~~~d---g~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~g~p~~i~~d~~G~lwv~~~~ 255 (355)
.. .........++++|+ ++. +++....+.|..|+++............. .......+.++++|++.++...
T Consensus 198 ~~~~~~~h~~~v~~~~~sp~~~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~ 276 (379)
T 3jrp_A 198 LESTLEGHSDWVRDVAWSPTVLLRSY-LASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGG 276 (379)
T ss_dssp EEEEECCCSSCEEEEEECCCCSSSEE-EEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEES
T ss_pred eEEEEecccCcEeEEEECCCCCCCCe-EEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecC
Confidence 11 112233567899999 664 44455667899999865321111122211 2233445678888875554433
No 241
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.27 E-value=0.00011 Score=67.32 Aligned_cols=193 Identities=17% Similarity=0.125 Sum_probs=102.0
Q ss_pred CceEEEeeCCCeEEEEec---CCEEEEEEcCCCeeEEeeccCCCcccCeEECCCCC-EEEEeCCCcEEEEcC-CC-eEEE
Q 018474 54 PEDVSVVVSKGALYTATR---DGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGG-VILCDNEKGLLKVTE-EG-VEAI 127 (355)
Q Consensus 54 p~~i~~d~~~g~l~~~~~---~g~i~~~~~~~g~~~~~~~~~~~p~~gl~~d~~g~-L~v~~~~~gl~~~~~-~g-~~~~ 127 (355)
..++++.|++..++.... +..|+.++..+++...+.........+..+.++|+ |+++.....++.++. ++ .+.+
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~ 117 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVI 117 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEE
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEE
Confidence 556778866666554433 24789999988887766443333330377889987 545554556888884 55 4443
Q ss_pred cCCcCCcccEEEccCCc-EEEEeCC---------CCCCCcccccccc---ccCCCCeEEEEeCCCCeEEEeecccccccc
Q 018474 128 VPDASFTNDVIAASDGT-LYFTVAS---------TKYTPTDFYKDMA---EGKPYGQLRKYDPKLKETTVLHEGFYFANG 194 (355)
Q Consensus 128 ~~~~~~~~~l~~d~dG~-ly~~d~~---------~~~~~~~~~~~~~---~~~~~g~l~~~dp~~~~~~~~~~~~~~png 194 (355)
.... .+ ..++|+ |.++... ..+.......... .......++.+|.++++.+.+.........
T Consensus 118 ~~~~---~~--~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~ 192 (396)
T 3c5m_A 118 YTVD---EE--WKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDTAWLGH 192 (396)
T ss_dssp EECC---TT--EEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEESSCEEE
T ss_pred Eecc---cc--cCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeeccCCccccc
Confidence 3211 11 112221 1111000 0000000000000 012345799999988887766544444567
Q ss_pred EEEeC-CCCEEEEEeCCC-----CeEEEEEeCCCCCcceeEecccCCC-CcCceEECCCCC-EEEEee
Q 018474 195 IALSK-NEDFVVVCESWK-----FRCRRYWLKGDRAGILDAFIENLPG-GPDNINLAPDGS-FWIGLI 254 (355)
Q Consensus 195 i~~~~-dg~~l~v~~~~~-----~~i~~~~~~~~~~~~~~~~~~~~~g-~p~~i~~d~~G~-lwv~~~ 254 (355)
++++| |++.++++.... .+|+.+++++... +.+....+. .+..+.++++|+ |+++..
T Consensus 193 ~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~---~~l~~~~~~~~~~~~~~spdg~~l~~~~~ 257 (396)
T 3c5m_A 193 PIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNV---RKIKEHAEGESCTHEFWIPDGSAMAYVSY 257 (396)
T ss_dssp EEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCC---EESSCCCTTEEEEEEEECTTSSCEEEEEE
T ss_pred ceECCCCCCEEEEEecCCCCCCCceEEEEECCCCce---eEeeccCCCccccceEECCCCCEEEEEec
Confidence 88999 787666554332 4799998865322 222211111 234467888996 555443
No 242
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=98.26 E-value=0.00019 Score=64.45 Aligned_cols=188 Identities=12% Similarity=0.036 Sum_probs=105.2
Q ss_pred EecCCCCCCCceEEEeeCCCeEEE-Eec---CCEEEEEEcCCCeeEEee--ccCCCcccCeEECCC---CC-EEEEeCCC
Q 018474 45 KLGEGCVNHPEDVSVVVSKGALYT-ATR---DGWVKYFILHNETLVNWK--HIDSQSLLGLTTTKD---GG-VILCDNEK 114 (355)
Q Consensus 45 ~~~~~~~~~p~~i~~d~~~g~l~~-~~~---~g~i~~~~~~~g~~~~~~--~~~~~p~~gl~~d~~---g~-L~v~~~~~ 114 (355)
.+..+.-....++++.+++..+.+ ++. +|.|..++..+++..... .....+. .+++.++ |+ |+.+...+
T Consensus 12 ~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~l~~~~~dg 90 (357)
T 3i2n_A 12 HIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIK-CGTFGATSLQQRYLATGDFGG 90 (357)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEE-EEECTTCCTTTCCEEEEETTS
T ss_pred hhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEE-EEEEcCCCCCCceEEEecCCC
Confidence 333344466788999965555554 443 789999999877654332 2234466 8888877 45 55555444
Q ss_pred cEEEEc-CCC---eEEEcCCcCCcccE------EEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCe--E
Q 018474 115 GLLKVT-EEG---VEAIVPDASFTNDV------IAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKE--T 182 (355)
Q Consensus 115 gl~~~~-~~g---~~~~~~~~~~~~~l------~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~--~ 182 (355)
.+..++ .++ ...+......+.++ +++++++..++.+. .+.+..||..+++ .
T Consensus 91 ~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~-----------------d~~i~vwd~~~~~~~~ 153 (357)
T 3i2n_A 91 NLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSR-----------------DGTVKVWDPRQKDDPV 153 (357)
T ss_dssp CEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEET-----------------TSCEEEECTTSCSSCS
T ss_pred eEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeC-----------------CCeEEEEeCCCCCCcc
Confidence 466666 332 44444333455555 44677866665432 4567788876654 2
Q ss_pred EEeecccc----ccccEE----EeCCCCEEEEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECC---CCCEEE
Q 018474 183 TVLHEGFY----FANGIA----LSKNEDFVVVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAP---DGSFWI 251 (355)
Q Consensus 183 ~~~~~~~~----~pngi~----~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~---~G~lwv 251 (355)
..+..... ....++ ++++++.++.+ ...+.|..|+++.... .... ........+.+++ +|++.+
T Consensus 154 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~---~~~~-~~~~~v~~~~~~~~~~~~~~l~ 228 (357)
T 3i2n_A 154 ANMEPVQGENKRDCWTVAFGNAYNQEERVVCAG-YDNGDIKLFDLRNMAL---RWET-NIKNGVCSLEFDRKDISMNKLV 228 (357)
T ss_dssp EEECCCTTSCCCCEEEEEEECCCC-CCCEEEEE-ETTSEEEEEETTTTEE---EEEE-ECSSCEEEEEESCSSSSCCEEE
T ss_pred eeccccCCCCCCceEEEEEEeccCCCCCEEEEE-ccCCeEEEEECccCce---eeec-CCCCceEEEEcCCCCCCCCEEE
Confidence 22211111 123344 67899866555 4567899999864322 1111 2333356677887 777655
Q ss_pred Eeec
Q 018474 252 GLIK 255 (355)
Q Consensus 252 ~~~~ 255 (355)
+...
T Consensus 229 ~~~~ 232 (357)
T 3i2n_A 229 ATSL 232 (357)
T ss_dssp EEES
T ss_pred EECC
Confidence 5443
No 243
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=98.26 E-value=0.0003 Score=70.82 Aligned_cols=253 Identities=11% Similarity=0.014 Sum_probs=135.8
Q ss_pred ceEEEeeCCCeEEEEecC---------CEEEEEEcCCCeeEEeeccCCCcccCeEECCCCCEEEEeCCCcEEEEcC-CC-
Q 018474 55 EDVSVVVSKGALYTATRD---------GWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVTE-EG- 123 (355)
Q Consensus 55 ~~i~~d~~~g~l~~~~~~---------g~i~~~~~~~g~~~~~~~~~~~p~~gl~~d~~g~L~v~~~~~gl~~~~~-~g- 123 (355)
.++.+.|++..+.+++.+ +.++.+|..+++.+.+........ ..++.+||+..+....+.|+..+. +|
T Consensus 65 ~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~~~~~~~~-~~~~SPdG~~la~~~~~~i~~~~~~~~~ 143 (740)
T 4a5s_A 65 NDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQ-WVTWSPVGHKLAYVWNNDIYVKIEPNLP 143 (740)
T ss_dssp CEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCTTEE-EEEECSSTTCEEEEETTEEEEESSTTSC
T ss_pred cceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEEcccCCCcce-eeEECCCCCEEEEEECCeEEEEECCCCc
Confidence 347888777777766543 567789998888766543334455 677889997333333456888874 55
Q ss_pred eEEEcCCc-------------------CCcccEEEccCCc-EEEEeCCCCCCCccccc--------------c---cccc
Q 018474 124 VEAIVPDA-------------------SFTNDVIAASDGT-LYFTVASTKYTPTDFYK--------------D---MAEG 166 (355)
Q Consensus 124 ~~~~~~~~-------------------~~~~~l~~d~dG~-ly~~d~~~~~~~~~~~~--------------~---~~~~ 166 (355)
.+.+.... .....+.++|||+ |.+..... -.++.+.. . ...+
T Consensus 144 ~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~-~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G 222 (740)
T 4a5s_A 144 SYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFND-TEVPLIEYSFYSDESLQYPKTVRVPYPKAG 222 (740)
T ss_dssp CEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEEC-TTCCEEEEEECCSTTCSSCEEEEEECCBTT
T ss_pred eEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcc-cCCceEEEEeecCCCCCCCcceeecCCCCc
Confidence 55543221 1123478999995 55442110 00110000 0 0111
Q ss_pred --CCCCeEEEEeCCC---C---eEEEeec------cccccccEEEeCCCCEEEE-EeCCC--CeEEEEEeCCCC----Cc
Q 018474 167 --KPYGQLRKYDPKL---K---ETTVLHE------GFYFANGIALSKNEDFVVV-CESWK--FRCRRYWLKGDR----AG 225 (355)
Q Consensus 167 --~~~g~l~~~dp~~---~---~~~~~~~------~~~~pngi~~~~dg~~l~v-~~~~~--~~i~~~~~~~~~----~~ 225 (355)
.....++.+|.++ + +...+.. .......++++|||+.++. ..... ..|+.+++++.. ..
T Consensus 223 ~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~ 302 (740)
T 4a5s_A 223 AVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCL 302 (740)
T ss_dssp SCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEEC
T ss_pred CcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCcccccee
Confidence 1223688999988 6 4444432 1222345789999984333 33222 258888876543 11
Q ss_pred ceeEe-cccCCCC-----cCceEECCCCCEEE--EeecCCchhhHhhhcchhHHHHHHhccchhhcccCCCCCCceEEEE
Q 018474 226 ILDAF-IENLPGG-----PDNINLAPDGSFWI--GLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVK 297 (355)
Q Consensus 226 ~~~~~-~~~~~g~-----p~~i~~d~~G~lwv--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 297 (355)
....+ .+...+. +....+.+||+.++ .... .....|+.
T Consensus 303 ~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~----------------------------------~G~~~l~~ 348 (740)
T 4a5s_A 303 VARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNE----------------------------------EGYRHICY 348 (740)
T ss_dssp GGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECT----------------------------------TSCEEEEE
T ss_pred EEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcC----------------------------------CCceEEEE
Confidence 11111 1112221 33577889997322 2222 22357999
Q ss_pred EeCCCCeEEEEEECCCCCcccceeEEEEeCCEEEEeecC------CCeEEEeeCCC
Q 018474 298 VDGNDGKIIRDFNDPDATYISFVTSAAEFDGNLYLASLQ------SNFIGILPLDG 347 (355)
Q Consensus 298 ~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~------~~~i~~~~~~~ 347 (355)
++. +|.....++..+ .........+++.||+.+.. ...|.++++++
T Consensus 349 ~~~-~~~~~~~lT~g~---~~v~~~~~~d~~~i~f~~~~~~~~~~~~~ly~v~~~g 400 (740)
T 4a5s_A 349 FQI-DKKDCTFITKGT---WEVIGIEALTSDYLYYISNEYKGMPGGRNLYKIQLID 400 (740)
T ss_dssp EET-TCSSCEESCCSS---SCEEEEEEECSSEEEEEESCGGGCTTCBEEEEEETTE
T ss_pred EEC-CCCceEecccCC---EEEEEEEEEeCCEEEEEEecCCCCCceeEEEEEECCC
Confidence 998 666555555422 21222222457888887654 24677777654
No 244
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=98.25 E-value=0.00054 Score=61.64 Aligned_cols=151 Identities=13% Similarity=0.046 Sum_probs=90.0
Q ss_pred CCCceEEEeeCCCeEEEEecCCEEEEEEcCCC-------eeE-EeeccCCCcccCeEECCCCCEEEEeCCCc-EEEEcC-
Q 018474 52 NHPEDVSVVVSKGALYTATRDGWVKYFILHNE-------TLV-NWKHIDSQSLLGLTTTKDGGVILCDNEKG-LLKVTE- 121 (355)
Q Consensus 52 ~~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g-------~~~-~~~~~~~~p~~gl~~d~~g~L~v~~~~~g-l~~~~~- 121 (355)
..-.++++.|++..|.+++.++.|..++..+. +.. .+......+. ++++.++|+++++...++ +..++.
T Consensus 59 ~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~-~v~~sp~g~~las~s~D~~v~iwd~~ 137 (330)
T 2hes_X 59 KAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVK-GVAWSNDGYYLATCSRDKSVWIWETD 137 (330)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEE-EEEECTTSCEEEEEETTSCEEEEECC
T ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEE-EEEECCCCCEEEEEeCCCEEEEEecc
Confidence 44568899977777888889999998887432 111 1111223466 899999998766554445 444442
Q ss_pred -CC-----eEEEcCCcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEE---Eeecccccc
Q 018474 122 -EG-----VEAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETT---VLHEGFYFA 192 (355)
Q Consensus 122 -~g-----~~~~~~~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~---~~~~~~~~p 192 (355)
.+ +..+......+++++++|+|.+.++.+. .+.+..||..++..+ .+.......
T Consensus 138 ~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~-----------------D~~i~iW~~~~~~~~~~~~~~~h~~~v 200 (330)
T 2hes_X 138 ESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSY-----------------DDTVRIWKDYDDDWECVAVLNGHEGTV 200 (330)
T ss_dssp TTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEET-----------------TSCEEEEEEETTEEEEEEEECCCSSCE
T ss_pred CCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcC-----------------CCeEEEEECCCCCeeEEEEccCCCCcE
Confidence 22 2233333367889999999987776443 345666665444322 222222334
Q ss_pred ccEEEeCC--CCEEEEEeCCCCeEEEEEeCC
Q 018474 193 NGIALSKN--EDFVVVCESWKFRCRRYWLKG 221 (355)
Q Consensus 193 ngi~~~~d--g~~l~v~~~~~~~i~~~~~~~ 221 (355)
..++++|+ +. .+++....+.|..|++.+
T Consensus 201 ~~~~~~~~~~~~-~l~s~s~D~~v~iw~~~~ 230 (330)
T 2hes_X 201 WSSDFDKTEGVF-RLCSGSDDSTVRVWKYMG 230 (330)
T ss_dssp EEEEECCSSSSC-EEEEEETTSCEEEEEEEE
T ss_pred EEEEecCCCCee-EEEEEeCCCeEEEEEecC
Confidence 57889998 44 445555567788887743
No 245
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=98.24 E-value=0.00031 Score=63.53 Aligned_cols=172 Identities=10% Similarity=0.019 Sum_probs=102.1
Q ss_pred CCeEEEEecCCEEEEEEcCCCeeEEeeccCCCcccCeE-------ECCCCCEEEEeCCCcEEEEc-CCC--eEEEc-CCc
Q 018474 63 KGALYTATRDGWVKYFILHNETLVNWKHIDSQSLLGLT-------TTKDGGVILCDNEKGLLKVT-EEG--VEAIV-PDA 131 (355)
Q Consensus 63 ~g~l~~~~~~g~i~~~~~~~g~~~~~~~~~~~p~~gl~-------~d~~g~L~v~~~~~gl~~~~-~~g--~~~~~-~~~ 131 (355)
+..++++..+|.|..+|..+++...... ...+. .+. ...|+.+.+-+....+..++ .++ ++.+. ...
T Consensus 48 ~~~l~sg~~Dg~v~iwd~~~~~~~~~~~-~~~v~-~~~~~~~~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (343)
T 3lrv_A 48 KWVCMCRCEDGALHFTQLKDSKTITTIT-TPNPR-TGGEHPAIISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSA 125 (343)
T ss_dssp EEEEEEEEETTEEEEEEESSSSCEEEEE-EECCC-TTCCCCSEEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCS
T ss_pred CCEEEEECCCCcEEEEECCCCcEEEEEe-cCCce-eeeeCCceEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCC
Confidence 5668888899999999998776432221 11222 322 23455555544444444444 233 33322 111
Q ss_pred CCcccEEEcc--CCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeecc--ccccccEEEeCCCCEEEEE
Q 018474 132 SFTNDVIAAS--DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEG--FYFANGIALSKNEDFVVVC 207 (355)
Q Consensus 132 ~~~~~l~~d~--dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~--~~~pngi~~~~dg~~l~v~ 207 (355)
..+.++++++ +|+++++.+. .+.+..||..+++....... ......++++||++ ++++
T Consensus 126 ~~v~~~~~~~~~~~~~l~s~s~-----------------dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~-~las 187 (343)
T 3lrv_A 126 NEIIYMYGHNEVNTEYFIWADN-----------------RGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSL-LLAL 187 (343)
T ss_dssp SCEEEEECCC---CCEEEEEET-----------------TCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSC-EEEE
T ss_pred CCEEEEEcCCCCCCCEEEEEeC-----------------CCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCC-EEEE
Confidence 4578889999 8887776433 56788888877766433322 22367899999998 4555
Q ss_pred eCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCCEEEEeec
Q 018474 208 ESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIK 255 (355)
Q Consensus 208 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~ 255 (355)
....+.|..|+++...... ..+.....+....+.++++|++.++...
T Consensus 188 g~~dg~i~iwd~~~~~~~~-~~~~~~h~~~v~~l~fs~~g~~l~s~~~ 234 (343)
T 3lrv_A 188 YSPDGILDVYNLSSPDQAS-SRFPVDEEAKIKEVKFADNGYWMVVECD 234 (343)
T ss_dssp ECTTSCEEEEESSCTTSCC-EECCCCTTSCEEEEEECTTSSEEEEEES
T ss_pred EcCCCEEEEEECCCCCCCc-cEEeccCCCCEEEEEEeCCCCEEEEEeC
Confidence 5567889999986533210 1222113334566788999987776654
No 246
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=98.23 E-value=0.0028 Score=57.30 Aligned_cols=153 Identities=10% Similarity=0.061 Sum_probs=95.9
Q ss_pred CCCCCCCceEEEeeCCCeEEEEecCCEEEEEEcCCCeeEEe---eccCCCcccCeEECCCCCEEEEeCCCc-EEEEc-CC
Q 018474 48 EGCVNHPEDVSVVVSKGALYTATRDGWVKYFILHNETLVNW---KHIDSQSLLGLTTTKDGGVILCDNEKG-LLKVT-EE 122 (355)
Q Consensus 48 ~~~~~~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~---~~~~~~p~~gl~~d~~g~L~v~~~~~g-l~~~~-~~ 122 (355)
.+.-..-.++++.|++..|.+++.++.+..++..++..+.. ......+. ++++.++|+++++...++ +..++ .+
T Consensus 58 ~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~-~v~~sp~~~~l~s~s~D~~v~iwd~~~ 136 (345)
T 3fm0_A 58 EGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVK-SVAWAPSGNLLATCSRDKSVWVWEVDE 136 (345)
T ss_dssp SSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEE-EEEECTTSSEEEEEETTSCEEEEEECT
T ss_pred cccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCce-EEEEeCCCCEEEEEECCCeEEEEECCC
Confidence 34444567899997777788889999999998866654322 22234466 899999998766554444 44445 33
Q ss_pred C--e---EEEcCCcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEE---eecccccccc
Q 018474 123 G--V---EAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTV---LHEGFYFANG 194 (355)
Q Consensus 123 g--~---~~~~~~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~---~~~~~~~png 194 (355)
+ . ..+......+..++++|+|.+.++.+. .+.+..||..+++... +.........
T Consensus 137 ~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~-----------------d~~i~~w~~~~~~~~~~~~~~~h~~~v~~ 199 (345)
T 3fm0_A 137 EDEYECVSVLNSHTQDVKHVVWHPSQELLASASY-----------------DDTVKLYREEEDDWVCCATLEGHESTVWS 199 (345)
T ss_dssp TSCEEEEEEECCCCSCEEEEEECSSSSCEEEEET-----------------TSCEEEEEEETTEEEEEEEECCCSSCEEE
T ss_pred CCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeC-----------------CCcEEEEEecCCCEEEEEEecCCCCceEE
Confidence 2 2 233333366888999999976665432 3456666665554332 2222234567
Q ss_pred EEEeCCCCEEEEEeCCCCeEEEEEe
Q 018474 195 IALSKNEDFVVVCESWKFRCRRYWL 219 (355)
Q Consensus 195 i~~~~dg~~l~v~~~~~~~i~~~~~ 219 (355)
++++||++.|..+ ...+.|..++.
T Consensus 200 l~~sp~g~~l~s~-s~D~~v~iW~~ 223 (345)
T 3fm0_A 200 LAFDPSGQRLASC-SDDRTVRIWRQ 223 (345)
T ss_dssp EEECTTSSEEEEE-ETTSCEEEEEE
T ss_pred EEECCCCCEEEEE-eCCCeEEEecc
Confidence 9999999965544 45667777765
No 247
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=98.20 E-value=0.0003 Score=64.66 Aligned_cols=181 Identities=13% Similarity=0.071 Sum_probs=112.6
Q ss_pred CceEEEeeC-CCeEEEEecCCEEEEEEcCCCeeEEeec------cCCCcccCeEECC-CCCEEEEeCCCc-EEEEc-C-C
Q 018474 54 PEDVSVVVS-KGALYTATRDGWVKYFILHNETLVNWKH------IDSQSLLGLTTTK-DGGVILCDNEKG-LLKVT-E-E 122 (355)
Q Consensus 54 p~~i~~d~~-~g~l~~~~~~g~i~~~~~~~g~~~~~~~------~~~~p~~gl~~d~-~g~L~v~~~~~g-l~~~~-~-~ 122 (355)
..++.+.+. +..++.++.++.|..+|..+++...... ...... .+.+.+ +++++++...++ +..++ . .
T Consensus 160 v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~~l~sgs~D~~v~~wd~~~~ 238 (380)
T 3iz6_a 160 ASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVL-SLSINSLNANMFISGSCDTTVRLWDLRIT 238 (380)
T ss_dssp CCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEE-EEEECSSSCCEEEEEETTSCEEEEETTTT
T ss_pred eEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeE-EEEeecCCCCEEEEEECCCeEEEEECCCC
Confidence 445555543 3458888899999999998876543221 112344 667764 677766655555 44455 3 3
Q ss_pred C--eEEEcCCcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeecc--------cccc
Q 018474 123 G--VEAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEG--------FYFA 192 (355)
Q Consensus 123 g--~~~~~~~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~--------~~~p 192 (355)
+ +..+......+++++++|+|...++.+. .+.+..||..+++....... ....
T Consensus 239 ~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~-----------------D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v 301 (380)
T 3iz6_a 239 SRAVRTYHGHEGDINSVKFFPDGQRFGTGSD-----------------DGTCRLFDMRTGHQLQVYNREPDRNDNELPIV 301 (380)
T ss_dssp CCCCEEECCCSSCCCEEEECTTSSEEEEECS-----------------SSCEEEEETTTTEEEEEECCCCSSSCCSSCSC
T ss_pred CcceEEECCcCCCeEEEEEecCCCeEEEEcC-----------------CCeEEEEECCCCcEEEEecccccccccccCce
Confidence 3 5555554467999999999988777544 56788888877754332211 1124
Q ss_pred ccEEEeCCCCEEEEEeCCCCeEEEEEeCCCCCcceeEec---ccCCCCcCceEECCCCCEEEEeec
Q 018474 193 NGIALSKNEDFVVVCESWKFRCRRYWLKGDRAGILDAFI---ENLPGGPDNINLAPDGSFWIGLIK 255 (355)
Q Consensus 193 ngi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~---~~~~g~p~~i~~d~~G~lwv~~~~ 255 (355)
..++++|+|+.++ +....+.|..|+..... ....+. ....+....+.++++|++.++...
T Consensus 302 ~~~~~s~~g~~l~-~g~~dg~i~vwd~~~~~--~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~ 364 (380)
T 3iz6_a 302 TSVAFSISGRLLF-AGYSNGDCYVWDTLLAE--MVLNLGTLQNSHEGRISCLGLSSDGSALCTGSW 364 (380)
T ss_dssp SEEEECSSSSEEE-EECTTSCEEEEETTTCC--EEEEECCSCSSCCCCCCEEEECSSSSEEEEECT
T ss_pred EEEEECCCCCEEE-EEECCCCEEEEECCCCc--eEEEEecccCCCCCceEEEEECCCCCEEEEeeC
Confidence 6799999999554 45567889999874321 111111 122233456788999987776544
No 248
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=98.20 E-value=3.2e-05 Score=65.19 Aligned_cols=105 Identities=16% Similarity=0.068 Sum_probs=73.9
Q ss_pred cCceEecCCCCCCCceEEEeeCCCeEEEEecCCEEEEEEcCCCeeEEeecc-------C-CCcccCeEECCCCCEEEEeC
Q 018474 41 KGLTKLGEGCVNHPEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHI-------D-SQSLLGLTTTKDGGVILCDN 112 (355)
Q Consensus 41 ~~~~~~~~~~~~~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~~~~-------~-~~p~~gl~~d~~g~L~v~~~ 112 (355)
..+.++..+.......++++| +|.||.. .+|.++++++.+++...|... + +.=. .+.+|++|.||+.+
T Consensus 30 ~~a~~iG~~gw~~~~~laf~P-~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~-a~~fD~~G~LYav~- 105 (236)
T 1tl2_A 30 ARATLIGKGGWSNFKFLFLSP-GGELYGV-LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQ-FLFFDPNGYLYAVS- 105 (236)
T ss_dssp HHSEEEESSSCTTCSEEEECT-TSCEEEE-ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCS-EEEECTTSCEEEEE-
T ss_pred hhccccCccccccceeEEECC-CccEEEE-eCCeEEEECCCCCCcccccccccEecccccccce-EEEECCCCCEEEeC-
Confidence 356778775578889999995 8899988 789999999866433322111 1 0113 68899999999995
Q ss_pred CCcEEEEcC--CC-e------EEEcCC-cCCcccEEEccCCcEEEEe
Q 018474 113 EKGLLKVTE--EG-V------EAIVPD-ASFTNDVIAASDGTLYFTV 149 (355)
Q Consensus 113 ~~gl~~~~~--~g-~------~~~~~~-~~~~~~l~~d~dG~ly~~d 149 (355)
.+.|+++++ ++ - ..+... -.....|.++|+|.||..+
T Consensus 106 dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~ 152 (236)
T 1tl2_A 106 KDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH 152 (236)
T ss_dssp TTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE
T ss_pred CCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe
Confidence 457999983 33 2 222221 1456889999999999876
No 249
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.19 E-value=0.0019 Score=63.26 Aligned_cols=42 Identities=17% Similarity=0.269 Sum_probs=29.9
Q ss_pred ceEEEEEeCCCCeEEEEEECCCCCcccceeEEEEeCCEEEEeec
Q 018474 292 GARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFDGNLYLASL 335 (355)
Q Consensus 292 ~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~ 335 (355)
.+.+..||.++|+.+-.+..+.+.....+ +.+.+|++||...
T Consensus 493 dg~l~A~D~~tG~~lW~~~l~~g~~~~P~--~y~~~G~qyv~~~ 534 (599)
T 1w6s_A 493 DGYLKARDSDTGDLLWKFKIPSGAIGYPM--TYTHKGTQYVAIY 534 (599)
T ss_dssp TSEEEEEETTTCCEEEEEECSSCCCSCCE--EEEETTEEEEEEE
T ss_pred CCeEEEEECCCCCEEEEeeCCCCcEeccE--EEEeCCEEEEEEE
Confidence 35799999879999888887776433222 3367899988643
No 250
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.19 E-value=0.0017 Score=63.34 Aligned_cols=43 Identities=26% Similarity=0.405 Sum_probs=30.1
Q ss_pred eEEEEEeCCCCeEEEEEECCCCCcccceeEEEEeCCEEEEeecCC
Q 018474 293 ARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFDGNLYLASLQS 337 (355)
Q Consensus 293 ~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~ 337 (355)
+.+..+|.++|+.+-.+..+.+..... .+...+|++|++...+
T Consensus 485 g~l~a~D~~tG~~lw~~~~~~~~~~~p--~~~~~~G~~yv~~~~G 527 (571)
T 2ad6_A 485 GYLKALDNKDGKELWNFKMPSGGIGSP--MTYSFKGKQYIGSMYG 527 (571)
T ss_dssp SEEEEEETTTCCEEEEEECSSCCCSCC--EEEEETTEEEEEEEEC
T ss_pred CeEEEEECCCCCEEEEEeCCCCcEeee--EEEEECCEEEEEEECC
Confidence 579999987999988888765532222 2335789999986533
No 251
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.18 E-value=0.0027 Score=63.33 Aligned_cols=53 Identities=13% Similarity=0.181 Sum_probs=37.9
Q ss_pred eEEEEEeCCCCeEEEEEECCCCCcccceeEEEEeCCEEEEeecC-----------------CCeEEEeeCCC
Q 018474 293 ARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFDGNLYLASLQ-----------------SNFIGILPLDG 347 (355)
Q Consensus 293 ~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~-----------------~~~i~~~~~~~ 347 (355)
+.+..+|.++|+.+-.+..+.+.....+ ..+.+|++|+.... ++++..+.|+.
T Consensus 498 g~l~a~D~~tG~~lw~~~~~~~~~~~p~--~y~~~G~~~v~~~~G~~~~~~~~~~~~~~~~~~~l~~f~l~~ 567 (677)
T 1kb0_A 498 GRLVAYHAATGEKLWEAPTGTGVVAAPS--TYMVDGRQYVSVAVGWGGVYGLAARATERQGPGTVYTFVVGG 567 (677)
T ss_dssp SEEEEEETTTCCEEEEEECSSCCCSCCE--EEEETTEEEEEEEECCCHHHHHHCCSCSCCCCCEEEEEEETC
T ss_pred CcEEEEECCCCceeeeeeCCCCcccCCE--EEEeCCEEEEEEeccCCccccccccccccCCCCeEEEEeccc
Confidence 5799999878999999987766432222 23578888886432 47889998883
No 252
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.17 E-value=0.00053 Score=68.40 Aligned_cols=196 Identities=9% Similarity=-0.010 Sum_probs=107.7
Q ss_pred CCceEEEeeCCCeEEEEecC---------CEEEEEEcCCCeeEEeeccCC---CcccCeEECCCCCEEEEeCCCcEEEEc
Q 018474 53 HPEDVSVVVSKGALYTATRD---------GWVKYFILHNETLVNWKHIDS---QSLLGLTTTKDGGVILCDNEKGLLKVT 120 (355)
Q Consensus 53 ~p~~i~~d~~~g~l~~~~~~---------g~i~~~~~~~g~~~~~~~~~~---~p~~gl~~d~~g~L~v~~~~~gl~~~~ 120 (355)
...++++.|++..|..+..+ +.|+.+|..+++.+.+..... .+. .+++.+||+..+....+.++.++
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~-~~~~SPdG~~la~~~~~~i~~~~ 140 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQ-YAGWGPKGQQLIFIFENNIYYCA 140 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCS-BCCBCSSTTCEEEEETTEEEEES
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCcccccccc-ccEECCCCCEEEEEECCeEEEEE
Confidence 37889999777767766542 778899998887655543222 255 78889999644333345788888
Q ss_pred C-CC-eEEEcCC-cC------------------CcccEEEccCCc-EEEEeCCCCCCCcccc------------ccc-c-
Q 018474 121 E-EG-VEAIVPD-AS------------------FTNDVIAASDGT-LYFTVASTKYTPTDFY------------KDM-A- 164 (355)
Q Consensus 121 ~-~g-~~~~~~~-~~------------------~~~~l~~d~dG~-ly~~d~~~~~~~~~~~------------~~~-~- 164 (355)
. +| ...+... .. .+.+++++|||+ |.++..... .+..+. ..+ +
T Consensus 141 ~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 219 (723)
T 1xfd_A 141 HVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDS-RVPIMELPTYTGSIYPTVKPYHYP 219 (723)
T ss_dssp SSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECT-TSCEEEECCCSSSSSCCCEEEECC
T ss_pred CCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCC-ccceEEeeccCCcCCCcceeccCC
Confidence 4 55 4443322 11 226799999995 555432100 000000 000 0
Q ss_pred -cc--CCCCeEEEEeCCCCeE-EEeecc------ccccccEEEeCCCCEEEEE-eCC--CCeEEEEEeCCCCCcceeEec
Q 018474 165 -EG--KPYGQLRKYDPKLKET-TVLHEG------FYFANGIALSKNEDFVVVC-ESW--KFRCRRYWLKGDRAGILDAFI 231 (355)
Q Consensus 165 -~~--~~~g~l~~~dp~~~~~-~~~~~~------~~~pngi~~~~dg~~l~v~-~~~--~~~i~~~~~~~~~~~~~~~~~ 231 (355)
.+ .....++.||.++++. ..+... ......++++|||+.++.. +.. ...|+.+++++... ...+.
T Consensus 220 ~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~--~~~~~ 297 (723)
T 1xfd_A 220 KAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVC--TKKHE 297 (723)
T ss_dssp BTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCE--EEEEE
T ss_pred CCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcc--eEEEE
Confidence 01 1123788999887763 333221 1223458999999966444 221 24577788754322 11111
Q ss_pred ccCCCC----cCceEECCCCC-EEEE
Q 018474 232 ENLPGG----PDNINLAPDGS-FWIG 252 (355)
Q Consensus 232 ~~~~g~----p~~i~~d~~G~-lwv~ 252 (355)
....+. +..+.+++||+ |++.
T Consensus 298 ~~~~~~~~~~~~~~~~spdg~~l~~~ 323 (723)
T 1xfd_A 298 DESEAWLHRQNEEPVFSKDGRKFFFI 323 (723)
T ss_dssp EECSSCCCCCCCCCEECTTSCSEEEE
T ss_pred eccCCEEeccCCCceEcCCCCeEEEE
Confidence 111222 23678889997 4443
No 253
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.17 E-value=0.0048 Score=57.60 Aligned_cols=138 Identities=13% Similarity=0.096 Sum_probs=73.5
Q ss_pred CCeEEEEeCCCCeEEEeeccccccccEEEeCCCCEEEEEeCCCCeEEEEEeCCCCCcceeEecc--cCCCCcCceEECCC
Q 018474 169 YGQLRKYDPKLKETTVLHEGFYFANGIALSKNEDFVVVCESWKFRCRRYWLKGDRAGILDAFIE--NLPGGPDNINLAPD 246 (355)
Q Consensus 169 ~g~l~~~dp~~~~~~~~~~~~~~pngi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~--~~~g~p~~i~~d~~ 246 (355)
.+.+..||..+++........ ...-.+++.+++.++. ....+.|..|+++... ....+.. ...+....+.++
T Consensus 298 d~~i~i~d~~~~~~~~~~~~~-~~~v~~~~~~~~~l~~-~~~dg~i~vwd~~~~~--~~~~~~~~~~~~~~v~~~~~~-- 371 (445)
T 2ovr_B 298 DTSIRVWDVETGNCIHTLTGH-QSLTSGMELKDNILVS-GNADSTVKIWDIKTGQ--CLQTLQGPNKHQSAVTCLQFN-- 371 (445)
T ss_dssp TSCEEEEETTTCCEEEEECCC-CSCEEEEEEETTEEEE-EETTSCEEEEETTTCC--EEEEECSTTSCSSCEEEEEEC--
T ss_pred CCeEEEEECCCCCEEEEEcCC-cccEEEEEEeCCEEEE-EeCCCeEEEEECCCCc--EEEEEccCCCCCCCEEEEEEC--
Confidence 567888888777654332221 1222345556664544 4466789999975322 1222221 011222335554
Q ss_pred CCEEEEeecCCchhhHhhhcchhHHHHHHhccchhhcccCCCCCCceEEEEEeCCCCeEEEEEEC-CCCCcccceeEEEE
Q 018474 247 GSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFND-PDATYISFVTSAAE 325 (355)
Q Consensus 247 G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~-~~g~~~~~~~~~~~ 325 (355)
+++.++.... +.|..+|.++|+.+..+.. ..+.....+..+..
T Consensus 372 ~~~l~s~~~d------------------------------------g~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~ 415 (445)
T 2ovr_B 372 KNFVITSSDD------------------------------------GTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRA 415 (445)
T ss_dssp SSEEEEEETT------------------------------------SEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEE
T ss_pred CCEEEEEeCC------------------------------------CeEEEEECCCCceeeeeeccccCCCCceEEEEEe
Confidence 5555554431 4688888767888777742 22222345666776
Q ss_pred eCCEEE--EeecCCC---eEEEeeCCCC
Q 018474 326 FDGNLY--LASLQSN---FIGILPLDGP 348 (355)
Q Consensus 326 ~~g~L~--v~~~~~~---~i~~~~~~~~ 348 (355)
..+..+ +++..+. +|.+++++..
T Consensus 416 s~~~~~la~~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 416 SNTKLVCAVGSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp CSSEEEEEEECSSSSSCCEEEEEECCCC
T ss_pred cCCEEEEEEcccCCCCccEEEEEECCCC
Confidence 654433 3443332 5888887764
No 254
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=98.16 E-value=0.0038 Score=56.16 Aligned_cols=171 Identities=10% Similarity=0.036 Sum_probs=96.7
Q ss_pred CCeEEEEecCCEEEEEEcCCCe-eEEeecc-CCCcccCeEECC--CCCEEEEeCCCc-EEEEc-CCC-e-EEEcCC-cCC
Q 018474 63 KGALYTATRDGWVKYFILHNET-LVNWKHI-DSQSLLGLTTTK--DGGVILCDNEKG-LLKVT-EEG-V-EAIVPD-ASF 133 (355)
Q Consensus 63 ~g~l~~~~~~g~i~~~~~~~g~-~~~~~~~-~~~p~~gl~~d~--~g~L~v~~~~~g-l~~~~-~~g-~-~~~~~~-~~~ 133 (355)
++.+.+-..++.+..++..+++ ...+... ...+. .+++.+ +|+++++...+| +..++ .++ . ...... ...
T Consensus 94 D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~ 172 (343)
T 3lrv_A 94 CNRLLLLYPGNQITILDSKTNKVLREIEVDSANEII-YMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVE 172 (343)
T ss_dssp TTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEE-EEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCC
T ss_pred CCeEEEEEccCceEEeecCCcceeEEeecCCCCCEE-EEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCc
Confidence 3333333334444444554554 2222211 13466 888888 888777544444 55566 455 3 333222 246
Q ss_pred cccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEE--Eeec-cccccccEEEeCCCCEEEEEeCC
Q 018474 134 TNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETT--VLHE-GFYFANGIALSKNEDFVVVCESW 210 (355)
Q Consensus 134 ~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~--~~~~-~~~~pngi~~~~dg~~l~v~~~~ 210 (355)
+..++++++|.+.++.+. .+.+..||..+++.. .+.. .......++++|+++.+..+.
T Consensus 173 i~~~~~~pdg~~lasg~~-----------------dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-- 233 (343)
T 3lrv_A 173 YSSGVLHKDSLLLALYSP-----------------DGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-- 233 (343)
T ss_dssp CCEEEECTTSCEEEEECT-----------------TSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE--
T ss_pred eEEEEECCCCCEEEEEcC-----------------CCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe--
Confidence 889999999988776433 567888888777533 3322 234457899999999776666
Q ss_pred CCeEEEEEeCCCCC-cceeEecccCCCCcC---ceEECCCCCEEEEeec
Q 018474 211 KFRCRRYWLKGDRA-GILDAFIENLPGGPD---NINLAPDGSFWIGLIK 255 (355)
Q Consensus 211 ~~~i~~~~~~~~~~-~~~~~~~~~~~g~p~---~i~~d~~G~lwv~~~~ 255 (355)
.+.|..|+++.... ...+.+.. ...+- .+.++++|++.++...
T Consensus 234 ~~~v~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~l~~~s~ 280 (343)
T 3lrv_A 234 DQTVVCFDLRKDVGTLAYPTYTI--PEFKTGTVTYDIDDSGKNMIAYSN 280 (343)
T ss_dssp SSBEEEEETTSSTTCBSSCCCBC-------CCEEEEECTTSSEEEEEET
T ss_pred CCeEEEEEcCCCCcceeeccccc--ccccccceEEEECCCCCEEEEecC
Confidence 34899999864321 11111110 11222 3889999987777543
No 255
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=98.16 E-value=0.00014 Score=66.27 Aligned_cols=185 Identities=5% Similarity=-0.084 Sum_probs=103.3
Q ss_pred CCCceEEEeeCCCeEEEEecCCEEEEEEcCCCe----eEEeeccCCCcccCeEECCCCCEEE-EeCCCcEEEEc-CCC--
Q 018474 52 NHPEDVSVVVSKGALYTATRDGWVKYFILHNET----LVNWKHIDSQSLLGLTTTKDGGVIL-CDNEKGLLKVT-EEG-- 123 (355)
Q Consensus 52 ~~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~----~~~~~~~~~~p~~gl~~d~~g~L~v-~~~~~gl~~~~-~~g-- 123 (355)
..-.++++.+++..|.+++.+|.|..++..+++ ...+......+. .+++.++|++++ +...+.+..++ .++
T Consensus 56 ~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 134 (377)
T 3dwl_C 56 KIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAAT-FVRWSPNEDKFAVGSGARVISVCYFEQEND 134 (377)
T ss_dssp SCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEE-EEECCTTSSCCEEEESSSCEEECCC-----
T ss_pred ceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceE-EEEECCCCCEEEEEecCCeEEEEEECCccc
Confidence 445788898767778888899999999987765 222222334566 888888887544 44333344445 222
Q ss_pred ---eEEEcC-CcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCC------------------e
Q 018474 124 ---VEAIVP-DASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLK------------------E 181 (355)
Q Consensus 124 ---~~~~~~-~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~------------------~ 181 (355)
.+.+.. ....+.+++++++|++.++.+. .+.+..||..++ +
T Consensus 135 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~-----------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 197 (377)
T 3dwl_C 135 WWVSKHLKRPLRSTILSLDWHPNNVLLAAGCA-----------------DRKAYVLSAYVRDVDAKPEASVWGSRLPFNT 197 (377)
T ss_dssp CCCCEEECSSCCSCEEEEEECTTSSEEEEEES-----------------SSCEEEEEECCSSCC-CCCSCSSCSCCCEEE
T ss_pred ceeeeEeecccCCCeEEEEEcCCCCEEEEEeC-----------------CCEEEEEEEEecccCCCccccccccccchhh
Confidence 234443 3367889999999976665432 345666664321 1
Q ss_pred EEEeeccccccccEEEeCCCCEEEEEeCCCCeEEEEEeCCCCCcc--eeEecccCCCCcCceEECCCCCEEEEeecC
Q 018474 182 TTVLHEGFYFANGIALSKNEDFVVVCESWKFRCRRYWLKGDRAGI--LDAFIENLPGGPDNINLAPDGSFWIGLIKM 256 (355)
Q Consensus 182 ~~~~~~~~~~pngi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~--~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~ 256 (355)
.............++++||++.++.+ ...+.|..|+++...... ...+. ........+.+.++|++.++....
T Consensus 198 ~~~~~~~~~~v~~~~~sp~~~~l~~~-~~d~~i~iwd~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~~ 272 (377)
T 3dwl_C 198 VCAEYPSGGWVHAVGFSPSGNALAYA-GHDSSVTIAYPSAPEQPPRALITVK-LSQLPLRSLLWANESAIVAAGYNY 272 (377)
T ss_dssp EEECCCCSSSEEEEEECTTSSCEEEE-ETTTEEC-CEECSTTSCEEECCCEE-CSSSCEEEEEEEETTEEEEEESSS
T ss_pred hhhcccCCceEEEEEECCCCCEEEEE-eCCCcEEEEECCCCCCcceeeEeec-CCCCceEEEEEcCCCCEEEEEcCC
Confidence 11111112235678999999955554 456789999986543210 11111 222234557788888777666443
No 256
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=98.15 E-value=0.002 Score=59.86 Aligned_cols=149 Identities=9% Similarity=0.099 Sum_probs=95.4
Q ss_pred CCCceEEEeeCC--CeEEEEecCCEEEEEEcCCCeeE----------------------------------------Eee
Q 018474 52 NHPEDVSVVVSK--GALYTATRDGWVKYFILHNETLV----------------------------------------NWK 89 (355)
Q Consensus 52 ~~p~~i~~d~~~--g~l~~~~~~g~i~~~~~~~g~~~----------------------------------------~~~ 89 (355)
..-.++++.+.+ ..+.+++.+|.|..++..+++.. .+.
T Consensus 94 ~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (447)
T 3dw8_B 94 EKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFA 173 (447)
T ss_dssp CCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEEC
T ss_pred CceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEec
Confidence 346788999655 57888888999988887543321 111
Q ss_pred c-cCCCcccCeEECCCCCEEEEeCCCc-EEEEcCC--C--eEEEc-------CCcCCcccEEEccCC-cEEEEeCCCCCC
Q 018474 90 H-IDSQSLLGLTTTKDGGVILCDNEKG-LLKVTEE--G--VEAIV-------PDASFTNDVIAASDG-TLYFTVASTKYT 155 (355)
Q Consensus 90 ~-~~~~p~~gl~~d~~g~L~v~~~~~g-l~~~~~~--g--~~~~~-------~~~~~~~~l~~d~dG-~ly~~d~~~~~~ 155 (355)
. ....+. ++++.++|+++++. .++ +..++.. + .+.+. .....+++++++++| ++.++.+.
T Consensus 174 ~~h~~~v~-~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~---- 247 (447)
T 3dw8_B 174 NAHTYHIN-SISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSS---- 247 (447)
T ss_dssp SCCSSCCC-EEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEET----
T ss_pred cCCCcceE-EEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeC----
Confidence 1 123466 88999999887776 445 4455533 3 33221 112568889999998 77766433
Q ss_pred CccccccccccCCCCeEEEEeCCCCeE-----EEeecccc------------ccccEEEeCCCCEEEEEeCCCCeEEEEE
Q 018474 156 PTDFYKDMAEGKPYGQLRKYDPKLKET-----TVLHEGFY------------FANGIALSKNEDFVVVCESWKFRCRRYW 218 (355)
Q Consensus 156 ~~~~~~~~~~~~~~g~l~~~dp~~~~~-----~~~~~~~~------------~pngi~~~~dg~~l~v~~~~~~~i~~~~ 218 (355)
.+.+..||..+++. ..+..... ....++++|+++.+..+. . +.|..|+
T Consensus 248 -------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~-~-~~v~iwd 312 (447)
T 3dw8_B 248 -------------KGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRD-Y-LSVKVWD 312 (447)
T ss_dssp -------------TSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEE-S-SEEEEEE
T ss_pred -------------CCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEee-C-CeEEEEe
Confidence 45688888776653 33322211 456799999999666554 4 8899999
Q ss_pred eCC
Q 018474 219 LKG 221 (355)
Q Consensus 219 ~~~ 221 (355)
+..
T Consensus 313 ~~~ 315 (447)
T 3dw8_B 313 LNM 315 (447)
T ss_dssp TTC
T ss_pred CCC
Confidence 853
No 257
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.14 E-value=0.0031 Score=61.49 Aligned_cols=65 Identities=6% Similarity=-0.008 Sum_probs=42.3
Q ss_pred eEEEeeCCCeEEEEecCCEEEEEEcCCCeeEEeeccCC-----CcccCeEECCCCCEEEEeC------CCcEEEEcC-CC
Q 018474 56 DVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHIDS-----QSLLGLTTTKDGGVILCDN------EKGLLKVTE-EG 123 (355)
Q Consensus 56 ~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~~~~~~-----~p~~gl~~d~~g~L~v~~~------~~gl~~~~~-~g 123 (355)
+++++ ++.+|+++.++.|+.+|.++|+..--..... .....-.+. +|.+|++.. .+.++.+|. +|
T Consensus 110 ~~~~~--~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~-~g~v~vg~~~~~~~~~g~v~a~D~~tG 186 (571)
T 2ad6_A 110 GLAYG--AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVA-KDTVLMGCSGAELGVRGAVNAFDLKTG 186 (571)
T ss_dssp CCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-TTEEEEECBCGGGTCCCEEEEEETTTC
T ss_pred ccEEE--CCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEE-CCEEEEEecCCccCCCCEEEEEECCCC
Confidence 35565 7789999999999999999997542212111 111012232 678999875 345889994 77
No 258
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.14 E-value=0.00038 Score=65.17 Aligned_cols=187 Identities=7% Similarity=-0.051 Sum_probs=117.2
Q ss_pred CCCCceEEEeeCCC-eEEEEecCCEEEEEEcCCCee--------EEeeccCCCcccCeEECC-CCCEEEEeCCCc-EEEE
Q 018474 51 VNHPEDVSVVVSKG-ALYTATRDGWVKYFILHNETL--------VNWKHIDSQSLLGLTTTK-DGGVILCDNEKG-LLKV 119 (355)
Q Consensus 51 ~~~p~~i~~d~~~g-~l~~~~~~g~i~~~~~~~g~~--------~~~~~~~~~p~~gl~~d~-~g~L~v~~~~~g-l~~~ 119 (355)
-....++++.+.+. .|.++..+|.|..++..++.. ..+......+. .+++.+ ++.++++....| +..+
T Consensus 181 ~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~-~v~~~p~~~~~l~s~~~dg~i~i~ 259 (430)
T 2xyi_A 181 QKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVE-DVAWHLLHESLFGSVADDQKLMIW 259 (430)
T ss_dssp SSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEE-EEEECSSCTTEEEEEETTSEEEEE
T ss_pred CCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEe-eeEEeCCCCCEEEEEeCCCeEEEE
Confidence 35678899996655 677888899999999866321 12222234466 888987 566766554444 5555
Q ss_pred c-CC----C-eEEEcCCcCCcccEEEccCCc-EEEEeCCCCCCCccccccccccCCCCeEEEEeCCCC-e-EEEeecccc
Q 018474 120 T-EE----G-VEAIVPDASFTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLK-E-TTVLHEGFY 190 (355)
Q Consensus 120 ~-~~----g-~~~~~~~~~~~~~l~~d~dG~-ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~-~-~~~~~~~~~ 190 (355)
+ .+ . ...+......++++++.+++. ++++.+. .+.+..||..+. + +..+.....
T Consensus 260 d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~-----------------dg~v~vwd~~~~~~~~~~~~~h~~ 322 (430)
T 2xyi_A 260 DTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSA-----------------DKTVALWDLRNLKLKLHSFESHKD 322 (430)
T ss_dssp ETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEET-----------------TSEEEEEETTCTTSCSEEEECCSS
T ss_pred ECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeC-----------------CCeEEEEeCCCCCCCeEEeecCCC
Confidence 5 32 2 333433336789999999884 6766433 567888887652 2 333332334
Q ss_pred ccccEEEeCCCCEEEEEeCCCCeEEEEEeCCCCCc-----------ceeEecccCCCCcCceEECCCCC-EEEEeec
Q 018474 191 FANGIALSKNEDFVVVCESWKFRCRRYWLKGDRAG-----------ILDAFIENLPGGPDNINLAPDGS-FWIGLIK 255 (355)
Q Consensus 191 ~pngi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~-----------~~~~~~~~~~g~p~~i~~d~~G~-lwv~~~~ 255 (355)
....++++|+++.++++....+.|..|+++..... ............+..+.++++|. +.++...
T Consensus 323 ~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~ 399 (430)
T 2xyi_A 323 EIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSE 399 (430)
T ss_dssp CEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEET
T ss_pred CEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEEC
Confidence 45688999999877887777889999998542110 11111112233467788999998 6666544
No 259
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=98.12 E-value=0.0027 Score=57.02 Aligned_cols=147 Identities=12% Similarity=0.060 Sum_probs=87.8
Q ss_pred CCceEEEeeCCCeEEEEecCCEEEEEEcCCCee--EEee-c--cCCCcccCeEECCCCCEEEEeCCCcEE-EEcC-C---
Q 018474 53 HPEDVSVVVSKGALYTATRDGWVKYFILHNETL--VNWK-H--IDSQSLLGLTTTKDGGVILCDNEKGLL-KVTE-E--- 122 (355)
Q Consensus 53 ~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~--~~~~-~--~~~~p~~gl~~d~~g~L~v~~~~~gl~-~~~~-~--- 122 (355)
.-.++.+. .+ .|.+++.++.|..++..++.. .... . ....+. ++++.++|+++++...++.+ .++. .
T Consensus 16 ~v~~~~~s-~~-~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~-~v~~sp~~~~las~s~D~~v~iw~~~~~~~ 92 (330)
T 2hes_X 16 KIWSFDFS-QG-ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIR-SVAWRPHTSLLAAGSFDSTVSIWAKEESAD 92 (330)
T ss_dssp CEEEEEEE-TT-EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEE-EEEECTTSSEEEEEETTSCEEEEEC-----
T ss_pred ceeeeccC-CC-EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEE-EEEECCCCCEEEEEeCCCcEEEEEcccCcC
Confidence 34567776 33 777888899999999876532 2222 1 123466 88999999876655454534 3332 1
Q ss_pred ----C--eEEEcCCcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCC-CC---e-EEEeeccccc
Q 018474 123 ----G--VEAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPK-LK---E-TTVLHEGFYF 191 (355)
Q Consensus 123 ----g--~~~~~~~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~-~~---~-~~~~~~~~~~ 191 (355)
. ...+......+.+++++++|++.++.+. .+.+..||.. .+ + ...+......
T Consensus 93 ~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~-----------------D~~v~iwd~~~~~~~~~~~~~~~~h~~~ 155 (330)
T 2hes_X 93 RTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSR-----------------DKSVWIWETDESGEEYECISVLQEHSQD 155 (330)
T ss_dssp --CCCEEEEEEC----CEEEEEECTTSCEEEEEET-----------------TSCEEEEECCTTCCCCEEEEEECCCSSC
T ss_pred ccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeC-----------------CCEEEEEeccCCCCCeEEEEEeccCCCc
Confidence 1 2223333367889999999987776433 4567777763 22 1 1222222234
Q ss_pred cccEEEeCCCCEEEEEeCCCCeEEEEEeC
Q 018474 192 ANGIALSKNEDFVVVCESWKFRCRRYWLK 220 (355)
Q Consensus 192 pngi~~~~dg~~l~v~~~~~~~i~~~~~~ 220 (355)
.+.++++|+++.+ ++....+.|..++..
T Consensus 156 v~~v~~~p~~~~l-~s~s~D~~i~iW~~~ 183 (330)
T 2hes_X 156 VKHVIWHPSEALL-ASSSYDDTVRIWKDY 183 (330)
T ss_dssp EEEEEECSSSSEE-EEEETTSCEEEEEEE
T ss_pred eEEEEECCCCCEE-EEEcCCCeEEEEECC
Confidence 5678999999854 555556778777764
No 260
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.11 E-value=0.0033 Score=58.93 Aligned_cols=223 Identities=12% Similarity=0.044 Sum_probs=127.6
Q ss_pred CCCceEEEee--CCCeEEEEecCCEEEEEEcCCCeeEEe---------------------eccCCCcccCeEECCCCCE-
Q 018474 52 NHPEDVSVVV--SKGALYTATRDGWVKYFILHNETLVNW---------------------KHIDSQSLLGLTTTKDGGV- 107 (355)
Q Consensus 52 ~~p~~i~~d~--~~g~l~~~~~~g~i~~~~~~~g~~~~~---------------------~~~~~~p~~gl~~d~~g~L- 107 (355)
..-.++.+.+ ++..+++++.+|.|..++..+++.... ....+....-..+.+++++
T Consensus 204 ~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l 283 (464)
T 3v7d_B 204 STVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIV 283 (464)
T ss_dssp SCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEE
T ss_pred CccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEE
Confidence 3445666663 345677788899999999866542110 0000111001223445554
Q ss_pred EEEeCCCcEEEEc-CCC--eEEEcCCcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEE
Q 018474 108 ILCDNEKGLLKVT-EEG--VEAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTV 184 (355)
Q Consensus 108 ~v~~~~~gl~~~~-~~g--~~~~~~~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~ 184 (355)
+++...+.+..++ .++ +..+......+.+++++++|+..++.+. .+.+..||..+++...
T Consensus 284 ~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~-----------------dg~i~vwd~~~~~~~~ 346 (464)
T 3v7d_B 284 VSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASM-----------------DTTIRIWDLENGELMY 346 (464)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEET-----------------TSCEEEEETTTTEEEE
T ss_pred EEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeC-----------------CCcEEEEECCCCcEEE
Confidence 4454444466666 455 5555444467889999999976665433 5678889987776543
Q ss_pred eecc-ccccccEEEeCCCCEEEEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCCEEEEeecCCchhhHh
Q 018474 185 LHEG-FYFANGIALSKNEDFVVVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIKMNQTGVRA 263 (355)
Q Consensus 185 ~~~~-~~~pngi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~ 263 (355)
...+ ......++++ ++.+ ++....+.|..|+++... .. +..........+.+.++|++.++...
T Consensus 347 ~~~~h~~~v~~~~~~--~~~l-~s~s~dg~v~vwd~~~~~--~~--~~~~~~~~~~~~~~~~~~~~l~~~~d-------- 411 (464)
T 3v7d_B 347 TLQGHTALVGLLRLS--DKFL-VSAAADGSIRGWDANDYS--RK--FSYHHTNLSAITTFYVSDNILVSGSE-------- 411 (464)
T ss_dssp EECCCSSCEEEEEEC--SSEE-EEEETTSEEEEEETTTCC--EE--EEEECTTCCCEEEEEECSSEEEEEET--------
T ss_pred EEeCCCCcEEEEEEc--CCEE-EEEeCCCcEEEEECCCCc--ee--eeecCCCCccEEEEEeCCCEEEEecC--------
Confidence 3322 2223455665 4544 444567889999985422 11 11112222344567778887776543
Q ss_pred hhcchhHHHHHHhccchhhcccCCCCCCceEEEEEeCCCCeEEEEEECCCCCcccceeEEEEeCCEEEEeecCCC
Q 018474 264 IQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFDGNLYLASLQSN 338 (355)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~~ 338 (355)
+.|..+|.++|+.+..+.... ...+..+..+++.+.++....+
T Consensus 412 -----------------------------g~i~iwd~~~g~~~~~~~~~~---~~~v~~v~~~~~~l~~~~~~~g 454 (464)
T 3v7d_B 412 -----------------------------NQFNIYNLRSGKLVHANILKD---ADQIWSVNFKGKTLVAAVEKDG 454 (464)
T ss_dssp -----------------------------TEEEEEETTTCCEEESCTTTT---CSEEEEEEEETTEEEEEEEETT
T ss_pred -----------------------------CeEEEEECCCCcEEehhhccC---CCcEEEEEecCCEEEEEEEeCC
Confidence 468888876788766533322 2356677777888877765443
No 261
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=98.10 E-value=0.00089 Score=69.07 Aligned_cols=184 Identities=13% Similarity=0.073 Sum_probs=114.2
Q ss_pred CCCCCCceEEEeeCCCeEEEEecCCEEEEEEcCCCeeEEeeccCCCcccCeEECCCCC-EEEEeCCCcEEEEc-CCC--e
Q 018474 49 GCVNHPEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGG-VILCDNEKGLLKVT-EEG--V 124 (355)
Q Consensus 49 ~~~~~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~~~~~~~p~~gl~~d~~g~-L~v~~~~~gl~~~~-~~g--~ 124 (355)
|.-....+++++|++..|.+++.+|.|..++..+++..........+. .+++.+ |+ |..+...+.+..++ .++ +
T Consensus 15 gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~-~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~ 92 (902)
T 2oaj_A 15 GMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIK-EMRFVK-GIYLVVINAKDTVYVLSLYSQKVL 92 (902)
T ss_dssp ECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECSSCCCEE-EEEEET-TTEEEEEETTCEEEEEETTTCSEE
T ss_pred CCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcCCCCCEE-EEEEcC-CCEEEEEECcCeEEEEECCCCcEE
Confidence 334567899999877788889999999999886665443322234466 899988 77 44454444455556 355 4
Q ss_pred EEEcCCcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeec------------ccccc
Q 018474 125 EAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHE------------GFYFA 192 (355)
Q Consensus 125 ~~~~~~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~------------~~~~p 192 (355)
..+... ..+..++++++|+..++... .|.+..||.++++...+.. .....
T Consensus 93 ~~~~~~-~~V~~v~~sp~g~~l~sgs~-----------------dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V 154 (902)
T 2oaj_A 93 TTVFVP-GKITSIDTDASLDWMLIGLQ-----------------NGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPI 154 (902)
T ss_dssp EEEECS-SCEEEEECCTTCSEEEEEET-----------------TSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCC
T ss_pred EEEcCC-CCEEEEEECCCCCEEEEEcC-----------------CCcEEEEECCCCccccceeccccccccccccCCCCe
Confidence 444322 56888999999965554322 5678888887776532210 11235
Q ss_pred ccEEEeCCCCEEEEEeCCCCeEEEEEeCCCCCcceeEecccC-----------------CCCcCceEECCCCCEEEEeec
Q 018474 193 NGIALSKNEDFVVVCESWKFRCRRYWLKGDRAGILDAFIENL-----------------PGGPDNINLAPDGSFWIGLIK 255 (355)
Q Consensus 193 ngi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~-----------------~g~p~~i~~d~~G~lwv~~~~ 255 (355)
..++++|++...+++....+.| .|+++... ....+.... ......+.+.++|++.++...
T Consensus 155 ~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~ 231 (902)
T 2oaj_A 155 VSIQWNPRDIGTVLISYEYVTL-TYSLVENE--IKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHE 231 (902)
T ss_dssp CEEEEETTEEEEEEEECSSCEE-EEETTTTE--EEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEET
T ss_pred EEEEEccCCCCEEEEEeCCCcE-EEECCCCc--eEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEEC
Confidence 6799999754455556667778 88875432 112221110 012344678888987776654
No 262
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.09 E-value=8.1e-05 Score=78.02 Aligned_cols=178 Identities=10% Similarity=0.016 Sum_probs=113.9
Q ss_pred CCceEEEe-eCCCeEEEEecCCEEEEEEcCCCeeEEeeccCC-CcccCeEECCCCC-EEEEeCCCcEE-EEcC-CC-eEE
Q 018474 53 HPEDVSVV-VSKGALYTATRDGWVKYFILHNETLVNWKHIDS-QSLLGLTTTKDGG-VILCDNEKGLL-KVTE-EG-VEA 126 (355)
Q Consensus 53 ~p~~i~~d-~~~g~l~~~~~~g~i~~~~~~~g~~~~~~~~~~-~p~~gl~~d~~g~-L~v~~~~~gl~-~~~~-~g-~~~ 126 (355)
...++++. |++..+.++. ++.|+.++..+++...+..... .+. .+++. +|+ |+++.....++ .++. .+ .+.
T Consensus 297 ~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~ 373 (1045)
T 1k32_A 297 SKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLKVPEPLRIRYV-RRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEK 373 (1045)
T ss_dssp GGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEECSCCSCEEEE-EECSS-SEEEEEEEETTEEEEEEEETTTCCEEE
T ss_pred ccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEEccCCCcceEE-eeeEc-CCCeEEEEECCCceEEEEECCCCCceE
Confidence 46789998 8777777665 7889999987777665433333 455 66677 775 55554444677 6774 45 555
Q ss_pred EcCCcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeeccc-cccccEEEeCCCCEEE
Q 018474 127 IVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGF-YFANGIALSKNEDFVV 205 (355)
Q Consensus 127 ~~~~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~~-~~pngi~~~~dg~~l~ 205 (355)
+......+..++++|||+..+.... .+.++.||.++++...+.... .....++++|||+.+.
T Consensus 374 l~~~~~~~~~~~~SpDG~~la~~~~-----------------~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la 436 (1045)
T 1k32_A 374 FEENLGNVFAMGVDRNGKFAVVAND-----------------RFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIA 436 (1045)
T ss_dssp CCCCCCSEEEEEECTTSSEEEEEET-----------------TSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEE
T ss_pred ecCCccceeeeEECCCCCEEEEECC-----------------CCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEE
Confidence 5433356788999999964433222 347999999888877665333 3347899999999887
Q ss_pred EEeCCC---------CeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCC-EEEEee
Q 018474 206 VCESWK---------FRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGS-FWIGLI 254 (355)
Q Consensus 206 v~~~~~---------~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~-lwv~~~ 254 (355)
++.... ..|+.+++++.. ...+. ........+.++++|+ +++++.
T Consensus 437 ~~~~~~~~~~~~~~~~~i~l~d~~~g~---~~~l~-~~~~~~~~~~~spdG~~l~~~s~ 491 (1045)
T 1k32_A 437 YGFPLKHGETDGYVMQAIHVYDMEGRK---IFAAT-TENSHDYAPAFDADSKNLYYLSY 491 (1045)
T ss_dssp EEEEECSSTTCSCCEEEEEEEETTTTE---EEECS-CSSSBEEEEEECTTSCEEEEEES
T ss_pred EEecCccccccCCCCCeEEEEECCCCc---EEEee-CCCcccCCceEcCCCCEEEEEec
Confidence 765422 478888876432 22222 1112234467888886 555543
No 263
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=98.09 E-value=0.00041 Score=70.03 Aligned_cols=188 Identities=15% Similarity=0.126 Sum_probs=109.5
Q ss_pred CCCCCCceEEEeeCCCeEEEEecCCEEEEEEcCCCeeEEe---eccCCCcccCeEECCC--CCEEEEeCCCc-EEEEc-C
Q 018474 49 GCVNHPEDVSVVVSKGALYTATRDGWVKYFILHNETLVNW---KHIDSQSLLGLTTTKD--GGVILCDNEKG-LLKVT-E 121 (355)
Q Consensus 49 ~~~~~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~---~~~~~~p~~gl~~d~~--g~L~v~~~~~g-l~~~~-~ 121 (355)
+.-..-.++++.+++..+.+++.+|.|..++..++..... ......+. ++++.++ |+++++...+| +..++ .
T Consensus 7 gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~-~l~~s~~~~~~~l~s~s~Dg~I~vwd~~ 85 (753)
T 3jro_A 7 AHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVW-RVDWAHPKFGTILASCSYDGKVLIWKEE 85 (753)
T ss_dssp -CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEE-EEEECCTTSCSEEEEEETTSCEEEEEEE
T ss_pred cCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceE-EEEecCCCCCCEEEEEeCCCeEEEEECC
Confidence 3344556778887777788888999999998864433322 11233466 8888765 77655544445 55555 3
Q ss_pred CC-e---EEEcCCcCCcccEEEccC--CcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCe---EEEeecccccc
Q 018474 122 EG-V---EAIVPDASFTNDVIAASD--GTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKE---TTVLHEGFYFA 192 (355)
Q Consensus 122 ~g-~---~~~~~~~~~~~~l~~d~d--G~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~---~~~~~~~~~~p 192 (355)
++ . ..+......+.+++++++ |++.++.+. .+.+..||..++. ...+.......
T Consensus 86 ~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~-----------------dg~I~vwdl~~~~~~~~~~~~~~~~~v 148 (753)
T 3jro_A 86 NGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASS-----------------DGKVSVVEFKENGTTSPIIIDAHAIGV 148 (753)
T ss_dssp TTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET-----------------TSEEEEEECCSSSCCCCEEEECCSSCE
T ss_pred CCcccccccccCCCCCeEEEEECCCCCCCEEEEEeC-----------------CCcEEEEEeecCCCcceeEeecCCCce
Confidence 44 2 222223367888999998 876665433 5678888876552 11222222334
Q ss_pred ccEEEeC-------------CCCEEEEEeCCCCeEEEEEeCCCCCc-ceeEecccCCCCcCceEECCC---CCEEEEeec
Q 018474 193 NGIALSK-------------NEDFVVVCESWKFRCRRYWLKGDRAG-ILDAFIENLPGGPDNINLAPD---GSFWIGLIK 255 (355)
Q Consensus 193 ngi~~~~-------------dg~~l~v~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~g~p~~i~~d~~---G~lwv~~~~ 255 (355)
..++++| |++.++.+ ...+.|..|++...... ..........+....+.+.++ |++.++...
T Consensus 149 ~~l~~~p~~~~~~~~~~~~~d~~~l~sg-s~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~ 227 (753)
T 3jro_A 149 NSASWAPATIEEDGEHNGTKESRKFVTG-GADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQ 227 (753)
T ss_dssp EEEEECCCC---------CGGGCCEEEE-ETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEES
T ss_pred EEEEecCcccccccccccCCCCCEEEEE-ECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEec
Confidence 6678888 57745444 45678999988543211 111111122333456778888 766665544
No 264
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.09 E-value=0.0068 Score=56.56 Aligned_cols=134 Identities=12% Similarity=0.083 Sum_probs=73.6
Q ss_pred CCeEEEEeCCCCeEEEeeccc-cccccEEEeCCCCEEEEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCC
Q 018474 169 YGQLRKYDPKLKETTVLHEGF-YFANGIALSKNEDFVVVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDG 247 (355)
Q Consensus 169 ~g~l~~~dp~~~~~~~~~~~~-~~pngi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G 247 (355)
.+.+..||..+++........ .....+++ +++.++.+. ..+.|..|+++... ....+. ........+..+ |
T Consensus 258 dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~-~d~~i~i~d~~~~~--~~~~~~-~~~~~v~~~~~~--~ 329 (445)
T 2ovr_B 258 DFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGS-LDTSIRVWDVETGN--CIHTLT-GHQSLTSGMELK--D 329 (445)
T ss_dssp TSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEE-TTSCEEEEETTTCC--EEEEEC-CCCSCEEEEEEE--T
T ss_pred CCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEe-CCCeEEEEECCCCC--EEEEEc-CCcccEEEEEEe--C
Confidence 567888888776543332221 12233444 777665554 56789999975432 112221 222222334443 5
Q ss_pred CEEEEeecCCchhhHhhhcchhHHHHHHhccchhhcccCCCCCCceEEEEEeCCCCeEEEEEECCCCCcccceeEEEEeC
Q 018474 248 SFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFD 327 (355)
Q Consensus 248 ~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~ 327 (355)
++.++.... +.|..+|..+++.+..+..+.+. ...++.+..++
T Consensus 330 ~~l~~~~~d------------------------------------g~i~vwd~~~~~~~~~~~~~~~~-~~~v~~~~~~~ 372 (445)
T 2ovr_B 330 NILVSGNAD------------------------------------STVKIWDIKTGQCLQTLQGPNKH-QSAVTCLQFNK 372 (445)
T ss_dssp TEEEEEETT------------------------------------SCEEEEETTTCCEEEEECSTTSC-SSCEEEEEECS
T ss_pred CEEEEEeCC------------------------------------CeEEEEECCCCcEEEEEccCCCC-CCCEEEEEECC
Confidence 555544331 35777887678888888654322 23455666655
Q ss_pred CEEEEeecCCCeEEEeeCCCC
Q 018474 328 GNLYLASLQSNFIGILPLDGP 348 (355)
Q Consensus 328 g~L~v~~~~~~~i~~~~~~~~ 348 (355)
+.|..++. .+.|..+++.+.
T Consensus 373 ~~l~s~~~-dg~v~iwd~~~~ 392 (445)
T 2ovr_B 373 NFVITSSD-DGTVKLWDLKTG 392 (445)
T ss_dssp SEEEEEET-TSEEEEEETTTC
T ss_pred CEEEEEeC-CCeEEEEECCCC
Confidence 55555554 677888877654
No 265
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.08 E-value=0.00084 Score=60.35 Aligned_cols=178 Identities=7% Similarity=-0.012 Sum_probs=102.9
Q ss_pred CCceEEEeeCCCeEEEEecC---C--EEEEEEcCCCeeEEeeccCCCcccCeEECCCCC-EEEEeC--------------
Q 018474 53 HPEDVSVVVSKGALYTATRD---G--WVKYFILHNETLVNWKHIDSQSLLGLTTTKDGG-VILCDN-------------- 112 (355)
Q Consensus 53 ~p~~i~~d~~~g~l~~~~~~---g--~i~~~~~~~g~~~~~~~~~~~p~~gl~~d~~g~-L~v~~~-------------- 112 (355)
...++.+.|++..|+....+ + .|+.++..+++...+..... .. ++++.++|+ |+++..
T Consensus 60 ~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~-~~-~~~wspdg~~l~~~~~~~~~~~~~~~~~~~ 137 (347)
T 2gop_A 60 NATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN-IR-SLEWNEDSRKLLIVGFKRREDEDFIFEDDV 137 (347)
T ss_dssp SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE-EE-EEEECTTSSEEEEEEECCCC---------C
T ss_pred cCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC-cc-ceeECCCCCEEEEEEccCCCcCCcEEEccc
Confidence 45568888766666655432 2 48899988887766554333 66 888988886 555431
Q ss_pred -------------CCcEEEEcC-CC-e-EEEcCCcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEe
Q 018474 113 -------------EKGLLKVTE-EG-V-EAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYD 176 (355)
Q Consensus 113 -------------~~gl~~~~~-~g-~-~~~~~~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~d 176 (355)
...++.++. +| . +.+.. . .+.++++++|| ++++..... . .. .......++.+|
T Consensus 138 ~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~----~---~~-~~~~~~~l~~~d 206 (347)
T 2gop_A 138 PAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHRE----I---IP-QYFKFWDIYIWE 206 (347)
T ss_dssp CCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECCC----S---SC-CSSCCEEEEEEE
T ss_pred ceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEeccc----c---cc-cccccccEEEeC
Confidence 134777774 56 5 66554 3 67788999999 666542210 0 00 000034788898
Q ss_pred CCCCeEEEeeccccccccEEEeCCCCEEEEEeCC-------CCeEEEEEeCCCCCcceeEecccCCCCcCc-eEECCCCC
Q 018474 177 PKLKETTVLHEGFYFANGIALSKNEDFVVVCESW-------KFRCRRYWLKGDRAGILDAFIENLPGGPDN-INLAPDGS 248 (355)
Q Consensus 177 p~~~~~~~~~~~~~~pngi~~~~dg~~l~v~~~~-------~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~-i~~d~~G~ 248 (355)
+++.+.+... . .. ..++|||+.+++.... ...|+.++ .+ +...+.........+ +.++ +|
T Consensus 207 --~~~~~~l~~~-~-~~-~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d-~~----~~~~l~~~~~~~~~~~~~~s-dg- 274 (347)
T 2gop_A 207 --DGKEEKMFEK-V-SF-YAVDSDGERILLYGKPEKKYMSEHNKLYIYD-GK----EVMGILDEVDRGVGQAKIKD-GK- 274 (347)
T ss_dssp --TTEEEEEEEE-E-SE-EEEEECSSCEEEEECCSSSCCCSSCEEEEEC-SS----CEEESSTTCCSEEEEEEEET-TE-
T ss_pred --CCceEEeccC-c-ce-eeECCCCCEEEEEEccccCCccccceEEEEC-CC----ceEeccccCCcccCCccEEc-Cc-
Confidence 6776665543 2 22 2349999977766533 24788877 32 222222222222233 5667 77
Q ss_pred EEEEeec
Q 018474 249 FWIGLIK 255 (355)
Q Consensus 249 lwv~~~~ 255 (355)
+++....
T Consensus 275 ~~~~~~~ 281 (347)
T 2gop_A 275 VYFTLFE 281 (347)
T ss_dssp EEEEEEE
T ss_pred EEEEEec
Confidence 6665543
No 266
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=98.05 E-value=0.00011 Score=73.64 Aligned_cols=132 Identities=8% Similarity=-0.023 Sum_probs=84.5
Q ss_pred CceEEEeeCCCeEEEEecCCEEEEEEcCCCeeEEeeccCC----CcccCeEECCCCCEE-EEeC---------CCcEEEE
Q 018474 54 PEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHIDS----QSLLGLTTTKDGGVI-LCDN---------EKGLLKV 119 (355)
Q Consensus 54 p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~~~~~~----~p~~gl~~d~~g~L~-v~~~---------~~gl~~~ 119 (355)
+.++.+.+ ++.++....++.|+.++..+++.+.+..... ... .+++.+||+.. ++.. ...++.+
T Consensus 18 ~~~~~~s~-dg~~~~~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~ 95 (719)
T 1z68_A 18 TFFPNWIS-GQEYLHQSADNNIVLYNIETGQSYTILSNRTMKSVNAS-NYGLSPDRQFVYLESDYSKLWRYSYTATYYIY 95 (719)
T ss_dssp CCCCEESS-SSEEEEECTTSCEEEEESSSCCEEEEECHHHHHTTTCS-EEEECTTSSEEEEEEEEEECSSSCEEEEEEEE
T ss_pred CCccEECC-CCeEEEEcCCCCEEEEEcCCCcEEEEEcccccccccee-eEEECCCCCeEEEEecCceeEEeecceEEEEE
Confidence 44777884 4466556678899999998888766543221 256 78899999843 3432 1346666
Q ss_pred cC-CC-e---EEEcCCcCCcccEEEccCCc-EEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeeccc----
Q 018474 120 TE-EG-V---EAIVPDASFTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGF---- 189 (355)
Q Consensus 120 ~~-~g-~---~~~~~~~~~~~~l~~d~dG~-ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~~---- 189 (355)
+. +| . +.+. ..+.+++++|||+ |.++. .+.|+.+|..+++...+....
T Consensus 96 d~~~g~~~~~~~l~---~~~~~~~~SPDG~~la~~~-------------------~~~i~~~~~~~g~~~~l~~~~~~~~ 153 (719)
T 1z68_A 96 DLSNGEFVRGNELP---RPIQYLCWSPVGSKLAYVY-------------------QNNIYLKQRPGDPPFQITFNGRENK 153 (719)
T ss_dssp ETTTTEECCSSCCC---SSBCCEEECSSTTCEEEEE-------------------TTEEEEESSTTSCCEECCCCCBTTT
T ss_pred ECCCCccccceecC---cccccceECCCCCEEEEEE-------------------CCeEEEEeCCCCCcEEEecCCCcCC
Confidence 64 55 4 3332 3578899999994 55542 236888888777654443211
Q ss_pred ---------------cccccEEEeCCCCEEEEEeC
Q 018474 190 ---------------YFANGIALSKNEDFVVVCES 209 (355)
Q Consensus 190 ---------------~~pngi~~~~dg~~l~v~~~ 209 (355)
....+++++|||+.|+++..
T Consensus 154 v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~ 188 (719)
T 1z68_A 154 IFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEF 188 (719)
T ss_dssp EEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEE
T ss_pred eEcccccceeeeecccCcccEEECCCCCEEEEEEE
Confidence 11247999999998877653
No 267
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.03 E-value=0.0046 Score=61.62 Aligned_cols=163 Identities=10% Similarity=0.010 Sum_probs=85.9
Q ss_pred eEEEeeCCCeEEEEecCCEEEEEEcCCCeeEEeeccC-C-----CcccCeEECCCCCEEEEeCC------CcEEEEc-CC
Q 018474 56 DVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHID-S-----QSLLGLTTTKDGGVILCDNE------KGLLKVT-EE 122 (355)
Q Consensus 56 ~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~~~~~-~-----~p~~gl~~d~~g~L~v~~~~------~gl~~~~-~~ 122 (355)
+++.+ ++.+|+++.++.|+.+|.++|+..--.... . .......++ ++.+|++... +.++.+| .+
T Consensus 123 ~~a~~--~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~-~~~v~v~~~~~~~~~~g~v~a~D~~t 199 (677)
T 1kb0_A 123 GVALW--KGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVF-KGKVIIGNGGAEYGVRGYITAYDAET 199 (677)
T ss_dssp CCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEE-TTEEEECCBCTTTCCBCEEEEEETTT
T ss_pred CceEE--CCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEE-CCEEEEEecccccCCCCEEEEEECCC
Confidence 45555 778999999999999999999754222221 1 111012232 6789987652 4588888 47
Q ss_pred C-eE-EEcC-Cc-------------------------------CCcccEEEccC-CcEEEEeCCCC-CCCcccccccccc
Q 018474 123 G-VE-AIVP-DA-------------------------------SFTNDVIAASD-GTLYFTVASTK-YTPTDFYKDMAEG 166 (355)
Q Consensus 123 g-~~-~~~~-~~-------------------------------~~~~~l~~d~d-G~ly~~d~~~~-~~~~~~~~~~~~~ 166 (355)
| .. .+.. .. .....+++|++ +.||++..... +.........-..
T Consensus 200 G~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~ 279 (677)
T 1kb0_A 200 GERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDN 279 (677)
T ss_dssp CCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCC
T ss_pred CcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCC
Confidence 7 32 2211 10 01134678876 47888765411 1000000000000
Q ss_pred CCCCeEEEEeCCCCeEEEeecc----------ccccccEEEeCCCC--EEEEEeCCCCeEEEEEeCC
Q 018474 167 KPYGQLRKYDPKLKETTVLHEG----------FYFANGIALSKNED--FVVVCESWKFRCRRYWLKG 221 (355)
Q Consensus 167 ~~~g~l~~~dp~~~~~~~~~~~----------~~~pngi~~~~dg~--~l~v~~~~~~~i~~~~~~~ 221 (355)
...+.|+.+|+++|+.....+. ...|.-+....||+ .+++..+..+.|+.+|.+.
T Consensus 280 ~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~t 346 (677)
T 1kb0_A 280 LYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTN 346 (677)
T ss_dssp TTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTT
T ss_pred eeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCC
Confidence 1124699999999987654321 11222222333662 2444445566777777643
No 268
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.01 E-value=0.00061 Score=62.23 Aligned_cols=179 Identities=12% Similarity=0.027 Sum_probs=99.9
Q ss_pred EEEeeCCCeEEEEecCCEEEEEEcCCCeeEEeeccCCC--cccC------------------eEECCCCC-EEEE-----
Q 018474 57 VSVVVSKGALYTATRDGWVKYFILHNETLVNWKHIDSQ--SLLG------------------LTTTKDGG-VILC----- 110 (355)
Q Consensus 57 i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~~~~~~~--p~~g------------------l~~d~~g~-L~v~----- 110 (355)
+.+.|++..|+....++.|+.++..+++.+.+...... +. | ..+.++|+ +.++
T Consensus 86 ~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~-g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~ 164 (396)
T 3c5m_A 86 GFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGY-GTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHT 164 (396)
T ss_dssp CEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEE-EEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHT
T ss_pred ceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCC-CCEEEeccCCccccccccccccCCCCcceeeeeeccC
Confidence 67887777787777777899999988776554332110 11 1 12233443 1111
Q ss_pred eCCCcEEEEc-CCC-eEEEcCCcCCcccEEEcc-CCc-EEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEee
Q 018474 111 DNEKGLLKVT-EEG-VEAIVPDASFTNDVIAAS-DGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH 186 (355)
Q Consensus 111 ~~~~gl~~~~-~~g-~~~~~~~~~~~~~l~~d~-dG~-ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~ 186 (355)
.....++.++ .++ .+.+......+.++.+++ +|. |++..... . ......|+.+|.++++.+.+.
T Consensus 165 ~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~-~-----------~~~~~~l~~~d~~~~~~~~l~ 232 (396)
T 3c5m_A 165 NPTCRLIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGP-H-----------DLVDARMWLVNEDGSNVRKIK 232 (396)
T ss_dssp CCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSC-S-----------SSCSCCCEEEETTSCCCEESS
T ss_pred CCcceEEEEECCCCcEEeeccCCcccccceECCCCCCEEEEEecCC-C-----------CCCCceEEEEECCCCceeEee
Confidence 1223477777 355 544443335577788988 674 66653220 0 001246888998777655554
Q ss_pred cc--ccccccEEEeCCCCEEEEEeC--CCCe--EEEEEeCCCCCcceeEecccCCCCcCceEECC-CCCEEEEee
Q 018474 187 EG--FYFANGIALSKNEDFVVVCES--WKFR--CRRYWLKGDRAGILDAFIENLPGGPDNINLAP-DGSFWIGLI 254 (355)
Q Consensus 187 ~~--~~~pngi~~~~dg~~l~v~~~--~~~~--i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~-~G~lwv~~~ 254 (355)
.. ......++++|||+.+++... .... |+++++++.. .+.+. ..++. . ..+.+ +|++++...
T Consensus 233 ~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~---~~~l~-~~~~~-~-~~~s~~dg~~l~~~~ 301 (396)
T 3c5m_A 233 EHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLE---NEEVM-VMPPC-S-HLMSNFDGSLMVGDG 301 (396)
T ss_dssp CCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCC---EEEEE-ECCSE-E-EEEECSSSSEEEEEE
T ss_pred ccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCC---eEEee-eCCCC-C-CCccCCCCceEEEec
Confidence 32 123456799999997666532 2233 8888875432 22222 22222 2 66777 898666543
No 269
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=98.00 E-value=0.00074 Score=63.21 Aligned_cols=247 Identities=12% Similarity=0.071 Sum_probs=133.7
Q ss_pred CCCceEEEeeC-CCeEEEEecCCEEEEEEcCCCeeEEeeccC---CCcccCeEECCCCCEEEEeCCCc-EEEEcCCC--e
Q 018474 52 NHPEDVSVVVS-KGALYTATRDGWVKYFILHNETLVNWKHID---SQSLLGLTTTKDGGVILCDNEKG-LLKVTEEG--V 124 (355)
Q Consensus 52 ~~p~~i~~d~~-~g~l~~~~~~g~i~~~~~~~g~~~~~~~~~---~~p~~gl~~d~~g~L~v~~~~~g-l~~~~~~g--~ 124 (355)
..-.+|++.|. +..|+.++.||.|..+|.+++....+.... .... .++++++|+++++....| +..++.++ +
T Consensus 165 ~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~ 243 (435)
T 4e54_B 165 GSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFC-SLDVSASSRMVVTGDNVGNVILLNMDGKEL 243 (435)
T ss_dssp CCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCC-CEEEETTTTEEEEECSSSBEEEEESSSCBC
T ss_pred CCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEE-EEEECCCCCEEEEEeCCCcEeeeccCccee
Confidence 44578899863 557888888999999999776665543321 2345 788889998776655545 55555444 4
Q ss_pred EEEcCCcCCcccEEEccCCc-EEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEE-Eee---ccccccccEEEeC
Q 018474 125 EAIVPDASFTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETT-VLH---EGFYFANGIALSK 199 (355)
Q Consensus 125 ~~~~~~~~~~~~l~~d~dG~-ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~-~~~---~~~~~pngi~~~~ 199 (355)
..+......++++++++++. +.++.+. .+.+..||..+.+.. .+. ......+.++++|
T Consensus 244 ~~~~~h~~~v~~v~~~p~~~~~~~s~s~-----------------d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~sp 306 (435)
T 4e54_B 244 WNLRMHKKKVTHVALNPCCDWFLATASV-----------------DQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSP 306 (435)
T ss_dssp CCSBCCSSCEEEEEECTTCSSEEEEEET-----------------TSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCT
T ss_pred EEEecccceEEeeeecCCCceEEEEecC-----------------cceeeEEecccccccceEEEeeeccccccceeECC
Confidence 33333336788899999874 5554322 344556665443211 111 0112235678999
Q ss_pred CCCEEEEEeCCCCeEEEEEeCCCCCcceeEecccCC-----CCcCceEECCCCCEEEEeecCCchhhHhhhcchhHHHHH
Q 018474 200 NEDFVVVCESWKFRCRRYWLKGDRAGILDAFIENLP-----GGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELL 274 (355)
Q Consensus 200 dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-----g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~ 274 (355)
||+.|+.+ ...+.|..|++..... ...+..... ..+-.....+++.+.+..........
T Consensus 307 dg~~l~s~-~~D~~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~------------- 370 (435)
T 4e54_B 307 DGARLLTT-DQKSEIRVYSASQWDC--PLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFK------------- 370 (435)
T ss_dssp TSSEEEEE-ESSSCEEEEESSSSSS--EEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSC-------------
T ss_pred CCCeeEEE-cCCCEEEEEECCCCcc--ceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeE-------------
Confidence 99966554 4567898898754221 111111100 01222345566655444332110000
Q ss_pred HhccchhhcccCCCCCCceEEEEEeCCCCeEEEEEECCCCCcccceeEE-EEe-CCEEEEeecCCCeEEEeeCCC
Q 018474 275 DAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSA-AEF-DGNLYLASLQSNFIGILPLDG 347 (355)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~-~~~-~g~L~v~~~~~~~i~~~~~~~ 347 (355)
.........|..+|..+|+.+..+..+... .+..+ ... +|++.+++. .+.|..-++..
T Consensus 371 -----------~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~---~v~s~~~fspdg~~lasg~-d~~i~iW~~~~ 430 (435)
T 4e54_B 371 -----------SCTPYELRTIDVFDGNSGKMMCQLYDPESS---GISSLNEFNPMGDTLASAM-GYHILIWSQQE 430 (435)
T ss_dssp -----------CSSTTCCCCEEEECSSSCCEEEEECCSSCC---CCCCEEEECTTSSCEEEEC-SSEEEECCCC-
T ss_pred -----------EEEecCCCEEEEEECCCCcEEEEEeCCCCC---cEEEEEEECCCCCEEEEEc-CCcEEEEECCc
Confidence 000122234777787678877776543321 23333 233 466656554 56777666544
No 270
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=97.97 E-value=0.00066 Score=60.99 Aligned_cols=200 Identities=12% Similarity=0.011 Sum_probs=112.2
Q ss_pred CCCCceEEEeeCCCeEEEEecCCEEEEEEcCCCeeEEeeccCCCcccCeEE--CCCCCEEEEeCCCc-EEEEc-CCC--e
Q 018474 51 VNHPEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHIDSQSLLGLTT--TKDGGVILCDNEKG-LLKVT-EEG--V 124 (355)
Q Consensus 51 ~~~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~~~~~~~p~~gl~~--d~~g~L~v~~~~~g-l~~~~-~~g--~ 124 (355)
-....++++.+++..|++++.+|.|..+|..+++..........+. ++++ +++++++++...+| +..++ .++ +
T Consensus 86 ~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~ 164 (368)
T 3mmy_A 86 TGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVK-TIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPM 164 (368)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEE-EEEEEECSSCEEEEEEETTSEEEEECSSCSSCS
T ss_pred cCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCceeeccccCceE-EEEEEeCCCCCEEEEccCCCcEEEEECCCCcEE
Confidence 3456788898767778889999999999998887766544445567 8888 88887555444444 55566 344 4
Q ss_pred EEEcCCc-------CCcccEEEccCCcEEEEeCCCCC------------CCcc---------ccccccccCCCCeEEEEe
Q 018474 125 EAIVPDA-------SFTNDVIAASDGTLYFTVASTKY------------TPTD---------FYKDMAEGKPYGQLRKYD 176 (355)
Q Consensus 125 ~~~~~~~-------~~~~~l~~d~dG~ly~~d~~~~~------------~~~~---------~~~~~~~~~~~g~l~~~d 176 (355)
..+.... ....-++...++.+.+-+..... .... ....+..+...+.+..||
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~ 244 (368)
T 3mmy_A 165 MVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHY 244 (368)
T ss_dssp EEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEE
T ss_pred EEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEe
Confidence 4433221 11122233334444433221100 0000 000133445566777777
Q ss_pred CCCCeE----EEeecccc------------ccccEEEeCCCCEEEEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCc
Q 018474 177 PKLKET----TVLHEGFY------------FANGIALSKNEDFVVVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDN 240 (355)
Q Consensus 177 p~~~~~----~~~~~~~~------------~pngi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~ 240 (355)
.+.... ..+..... ....++++||++.++.+. ..+.|..|+++... ....+. ...+....
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~-~dg~i~iwd~~~~~--~~~~~~-~~~~~v~~ 320 (368)
T 3mmy_A 245 INPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVG-SDGRFSFWDKDART--KLKTSE-QLDQPISA 320 (368)
T ss_dssp SSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEE-TTSCEEEEETTTTE--EEEECC-CCSSCEEE
T ss_pred cCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEc-cCCeEEEEECCCCc--EEEEec-CCCCCceE
Confidence 655421 11111111 356789999998665554 56789999985321 122221 22334566
Q ss_pred eEECCCCCEEEEeec
Q 018474 241 INLAPDGSFWIGLIK 255 (355)
Q Consensus 241 i~~d~~G~lwv~~~~ 255 (355)
+.++++|++.++...
T Consensus 321 ~~~s~~g~~l~~~s~ 335 (368)
T 3mmy_A 321 CCFNHNGNIFAYASS 335 (368)
T ss_dssp EEECTTSSCEEEEEC
T ss_pred EEECCCCCeEEEEec
Confidence 889999986666544
No 271
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=97.97 E-value=0.005 Score=54.22 Aligned_cols=185 Identities=13% Similarity=0.026 Sum_probs=101.0
Q ss_pred CCceEEEeeC--CCeEEEEecCCEEEEEEcCCCeeEE---eeccCCCcccCeEECCC--CCEEEEeCCCc-EEEEc-CCC
Q 018474 53 HPEDVSVVVS--KGALYTATRDGWVKYFILHNETLVN---WKHIDSQSLLGLTTTKD--GGVILCDNEKG-LLKVT-EEG 123 (355)
Q Consensus 53 ~p~~i~~d~~--~g~l~~~~~~g~i~~~~~~~g~~~~---~~~~~~~p~~gl~~d~~--g~L~v~~~~~g-l~~~~-~~g 123 (355)
.-.++++.++ +..|..++.||.|..+|..+++... +......+. .+++.++ |.++++...++ +..++ .++
T Consensus 55 ~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~-~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~ 133 (297)
T 2pm7_B 55 PVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVN-SVQWAPHEYGPMLLVASSDGKVSVVEFKEN 133 (297)
T ss_dssp CEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEE-EEEECCGGGCSEEEEEETTSEEEEEEBCSS
T ss_pred CeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCcee-EEEeCcCCCCcEEEEEECCCcEEEEEecCC
Confidence 3456777532 5667788899999999997774322 211223456 7888775 66555444445 44444 222
Q ss_pred ----eEEEcCCcCCcccEEEccCC-------------cEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCe--EE-
Q 018474 124 ----VEAIVPDASFTNDVIAASDG-------------TLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKE--TT- 183 (355)
Q Consensus 124 ----~~~~~~~~~~~~~l~~d~dG-------------~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~--~~- 183 (355)
...+......++.+.+++++ +++++.+ ..+.+..||..+++ ..
T Consensus 134 ~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs-----------------~D~~v~lwd~~~~~~~~~~ 196 (297)
T 2pm7_B 134 GTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGG-----------------ADNLVKIWKYNSDAQTYVL 196 (297)
T ss_dssp SCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEE-----------------TTSCEEEEEEETTTTEEEE
T ss_pred CceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEc-----------------CCCcEEEEEEcCCCceEEE
Confidence 22232223567777887763 3343322 24456566544432 11
Q ss_pred --EeeccccccccEEEeCCC--CEEEEEeCCCCeEEEEEeCCCCCc-ceeEec-ccCCCCcCceEECCCCCEEEEeec
Q 018474 184 --VLHEGFYFANGIALSKNE--DFVVVCESWKFRCRRYWLKGDRAG-ILDAFI-ENLPGGPDNINLAPDGSFWIGLIK 255 (355)
Q Consensus 184 --~~~~~~~~pngi~~~~dg--~~l~v~~~~~~~i~~~~~~~~~~~-~~~~~~-~~~~g~p~~i~~d~~G~lwv~~~~ 255 (355)
.+.......+.++++|++ ..++++....+.|..++++..... ....+. ...+.....+.++++|++.++...
T Consensus 197 ~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~ 274 (297)
T 2pm7_B 197 ESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGG 274 (297)
T ss_dssp EEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEET
T ss_pred EEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcC
Confidence 222122335789999986 346666667788888888643211 111111 112222334678888887666544
No 272
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=97.97 E-value=0.00041 Score=65.81 Aligned_cols=192 Identities=11% Similarity=0.020 Sum_probs=101.5
Q ss_pred CCCceEEEeeC---CCeEEEEec---C----------CEEEEEEcCCC--------eeEEeec----c-CCCcccCeEEC
Q 018474 52 NHPEDVSVVVS---KGALYTATR---D----------GWVKYFILHNE--------TLVNWKH----I-DSQSLLGLTTT 102 (355)
Q Consensus 52 ~~p~~i~~d~~---~g~l~~~~~---~----------g~i~~~~~~~g--------~~~~~~~----~-~~~p~~gl~~d 102 (355)
.++-+|+++|+ ++.||+... + .+|.|+....+ +.+.+.. . ..... .|+++
T Consensus 69 ~Gllgia~~P~f~~n~~lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~-~l~fg 147 (463)
T 2wg3_C 69 RGLLSLAFHPNYKKNGKLYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGG-QLLFG 147 (463)
T ss_dssp CSEEEEEECTTHHHHCEEEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEE-EEEEC
T ss_pred CcceeeEeCCCCcCCCEEEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCC-cEeEC
Confidence 46778999953 578998632 1 27878776421 1122211 1 12244 68999
Q ss_pred CCCCEEEEeCC------------------CcEEEEcCCC-e---------------------EEEcCCcCCcccEEEccC
Q 018474 103 KDGGVILCDNE------------------KGLLKVTEEG-V---------------------EAIVPDASFTNDVIAASD 142 (355)
Q Consensus 103 ~~g~L~v~~~~------------------~gl~~~~~~g-~---------------------~~~~~~~~~~~~l~~d~d 142 (355)
+||.|||+... +.|+|++++| - ++++.....|.++++|+.
T Consensus 148 pDG~LYv~~Gd~~~~~~~~~~~q~~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RNp~gla~dp~ 227 (463)
T 2wg3_C 148 PDGFLYIILGDGMITLDDMEEMDGLSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHDPGRCAVDRH 227 (463)
T ss_dssp TTSCEEEEECCTTCCHHHHHHCTTCCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCSSCCBEEEESS
T ss_pred CCCcEEEEeCCCCCCCCccccccCcCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCCCcceEEECCC
Confidence 99999998532 1288888543 1 223333378999999986
Q ss_pred -----C--cEEEEeCCCCCCCccccccccccCCCC---eEEEEeCCCCeEEEeeccccccccEEEeC-------CCCEEE
Q 018474 143 -----G--TLYFTVASTKYTPTDFYKDMAEGKPYG---QLRKYDPKLKETTVLHEGFYFANGIALSK-------NEDFVV 205 (355)
Q Consensus 143 -----G--~ly~~d~~~~~~~~~~~~~~~~~~~~g---~l~~~dp~~~~~~~~~~~~~~pngi~~~~-------dg~~l~ 205 (355)
| .+|.+|........+....+.++...| -++.|.+.. ...|.|+++.. .|+ ++
T Consensus 228 tg~~~G~l~~~~~D~~G~~~~~~ei~~i~~G~~yG~~~P~~~~~~~~---------g~Ap~G~~~Y~G~~fP~~~g~-~f 297 (463)
T 2wg3_C 228 PTDININLTILCSDSNGKNRSSARILQIIKGKDYESEPSLLEFKPFS---------NGPLVGGFVYRGCQSERLYGS-YV 297 (463)
T ss_dssp CSSTTCSEEEEEECC------CEEEEEEC----CCSCCCCEECCC-------------CEEEEEECCCSSCTTTTTC-EE
T ss_pred CCCcccceEEEecccCCCCCCCCeEeeeccCCCCCCCCCeEEeeCCC---------CccccceEEEeCCCChhhcce-EE
Confidence 5 456677421100011112222221111 133333210 02345555543 233 67
Q ss_pred EEeCCCCeEEEEEeCCCC-CcceeEec-c-------cCCCCcCceEECCCCCEEEEeec
Q 018474 206 VCESWKFRCRRYWLKGDR-AGILDAFI-E-------NLPGGPDNINLAPDGSFWIGLIK 255 (355)
Q Consensus 206 v~~~~~~~i~~~~~~~~~-~~~~~~~~-~-------~~~g~p~~i~~d~~G~lwv~~~~ 255 (355)
+++.. ++|+++.++... ....+.+. . ...+.|.++.+++||.|||++..
T Consensus 298 ~~~~~-g~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~r~~~v~~~pdG~Lyv~~~~ 355 (463)
T 2wg3_C 298 FGDRN-GNFLTLQQSPVTKQWQEKPLCLGTSGSCRGYFSGHILGFGEDELGEVYILSSS 355 (463)
T ss_dssp EEETT-SCEEEEEC-----CCEEEEECEEETTSSCSCCCSEEEEEEECTTCCEEEEEES
T ss_pred EecCC-CcEEEEEeCCCCceeeEEEeecCCcccccccccCcceEEEECCCCCEEEEecc
Confidence 77765 789999875432 22222221 1 12345788999999999999964
No 273
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=97.95 E-value=0.00025 Score=70.86 Aligned_cols=160 Identities=8% Similarity=0.012 Sum_probs=89.2
Q ss_pred CceEEEeeCCCeEEEEec---------CCEEEEEEcCCCee---EEeeccCCCcccCeEECCCCCEEEEeCCCcEEEEcC
Q 018474 54 PEDVSVVVSKGALYTATR---------DGWVKYFILHNETL---VNWKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVTE 121 (355)
Q Consensus 54 p~~i~~d~~~g~l~~~~~---------~g~i~~~~~~~g~~---~~~~~~~~~p~~gl~~d~~g~L~v~~~~~gl~~~~~ 121 (355)
..++++.|++..|.++.. ++.|+.+|..+++. ..+ ..... .+++.+||+..+....+.|+.++.
T Consensus 62 ~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l---~~~~~-~~~~SPDG~~la~~~~~~i~~~~~ 137 (719)
T 1z68_A 62 ASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL---PRPIQ-YLCWSPVGSKLAYVYQNNIYLKQR 137 (719)
T ss_dssp CSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC---CSSBC-CEEECSSTTCEEEEETTEEEEESS
T ss_pred eeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceec---Ccccc-cceECCCCCEEEEEECCeEEEEeC
Confidence 568899977777766654 57899999988876 433 23466 889999997444333556778774
Q ss_pred -CC-eEEEcCCc-------------------CCcccEEEccCCc-EEEEeCCCCCCCccccc------------c---cc
Q 018474 122 -EG-VEAIVPDA-------------------SFTNDVIAASDGT-LYFTVASTKYTPTDFYK------------D---MA 164 (355)
Q Consensus 122 -~g-~~~~~~~~-------------------~~~~~l~~d~dG~-ly~~d~~~~~~~~~~~~------------~---~~ 164 (355)
+| ...+.... ....+++++|||+ |.++.... -.+..+.. . ..
T Consensus 138 ~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~-~~~~~~~~~~~~~~~~~~~~~~~yp~ 216 (719)
T 1z68_A 138 PGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFND-TDIPVIAYSYYGDEQYPRTINIPYPK 216 (719)
T ss_dssp TTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEEC-TTSCEEEEEECCSSSSCEEEEEECCB
T ss_pred CCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECC-CCCceEEeeccCCCCCccceeecCCC
Confidence 55 44443211 1125799999995 54432110 00000000 0 00
Q ss_pred cc--CCCCeEEEEeCCCCeEE---Eee------ccccccccEEEeCCCCEEEEE-eCCC--CeEEEEE
Q 018474 165 EG--KPYGQLRKYDPKLKETT---VLH------EGFYFANGIALSKNEDFVVVC-ESWK--FRCRRYW 218 (355)
Q Consensus 165 ~~--~~~g~l~~~dp~~~~~~---~~~------~~~~~pngi~~~~dg~~l~v~-~~~~--~~i~~~~ 218 (355)
.+ .....++.+|.++++.. .+. ........++++||++.++.. +... ..|+.++
T Consensus 217 ~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d 284 (719)
T 1z68_A 217 AGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICD 284 (719)
T ss_dssp TTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEE
T ss_pred CCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEc
Confidence 01 12236888888776531 111 111223568899997644432 2221 3488888
No 274
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=97.94 E-value=4.3e-05 Score=70.44 Aligned_cols=141 Identities=16% Similarity=0.128 Sum_probs=61.4
Q ss_pred eEEEeeCCCeEEEEecCCEEEEEEcCCCeeEEeeccCCCcccCeEECCCCCEEEEe-CCCcEEEEcC-CC--eEEEcCCc
Q 018474 56 DVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGGVILCD-NEKGLLKVTE-EG--VEAIVPDA 131 (355)
Q Consensus 56 ~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~~~~~~~p~~gl~~d~~g~L~v~~-~~~gl~~~~~-~g--~~~~~~~~ 131 (355)
+.+++ ++.+|+++.+|.|+.+|.++|+..--... +... +..+-.+|++|++. ..+.++.++. +| +..+....
T Consensus 4 sP~v~--~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-~~~~-s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~ 79 (369)
T 2hz6_A 4 TVTLP--ETLLFVSTLDGSLHAVSKRTGSIKWTLKE-DPVL-QVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTI 79 (369)
T ss_dssp ----C--TTEEEEEETTSEEEEEETTTCCEEEEEEC-CCSC-CCC-----CCEEECTTTCCEEEC-----CCSEECSCCH
T ss_pred CCeee--CCEEEEEcCCCEEEEEECCCCCEEEEecC-CCce-ecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccC
Confidence 34454 88999999999999999989976522222 3333 33333467777764 4456888884 66 33322211
Q ss_pred -CCc-ccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeeccccccccEEEeCCCCEEEEEeC
Q 018474 132 -SFT-NDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYFANGIALSKNEDFVVVCES 209 (355)
Q Consensus 132 -~~~-~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~~~~pngi~~~~dg~~l~v~~~ 209 (355)
... ...++..++.+|++. ..+.++.+|+++|+....... +.....+|+++.+|++.
T Consensus 80 ~~~~~~sp~~~~~~~v~~g~------------------~dg~v~a~D~~tG~~~w~~~~---~~~~~~~p~~~~v~~~~- 137 (369)
T 2hz6_A 80 PELVQASPCRSSDGILYMGK------------------KQDIWYVIDLLTGEKQQTLSS---AFADSLSPSTSLLYLGR- 137 (369)
T ss_dssp HHHHTTCSCC-----CCCCE------------------EEEEEEEECCC-------------------------EEEEE-
T ss_pred ccccccCceEecCCEEEEEe------------------CCCEEEEEECCCCcEEEEecC---CCcccccccCCEEEEEe-
Confidence 000 111222345555432 245799999998876433221 11234556777777764
Q ss_pred CCCeEEEEEeCCC
Q 018474 210 WKFRCRRYWLKGD 222 (355)
Q Consensus 210 ~~~~i~~~~~~~~ 222 (355)
..+.|..++.+..
T Consensus 138 ~dg~v~a~d~~tG 150 (369)
T 2hz6_A 138 TEYTITMYDTKTR 150 (369)
T ss_dssp EEEEEECCCSSSS
T ss_pred cCCEEEEEECCCC
Confidence 3467888887543
No 275
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=97.91 E-value=0.0012 Score=61.53 Aligned_cols=151 Identities=9% Similarity=0.118 Sum_probs=90.2
Q ss_pred CCCceEEEeeCCCeEEEEecCCEEEEEEcC---CCeeEEeec-------------cCCCcccCeE--ECCCCCEEEEeCC
Q 018474 52 NHPEDVSVVVSKGALYTATRDGWVKYFILH---NETLVNWKH-------------IDSQSLLGLT--TTKDGGVILCDNE 113 (355)
Q Consensus 52 ~~p~~i~~d~~~g~l~~~~~~g~i~~~~~~---~g~~~~~~~-------------~~~~p~~gl~--~d~~g~L~v~~~~ 113 (355)
....++++.+++..|++++.+|.|..++.. +++...... ...... .+. ..+++.++++...
T Consensus 112 ~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~ 190 (437)
T 3gre_A 112 STVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAV-RMRAFVNEEKSLLVALTN 190 (437)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEE-EEEEEECSSCEEEEEEET
T ss_pred CCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCce-EEEEEEcCCCCEEEEEeC
Confidence 456788998667778889999999888773 343222111 111222 333 3456765554434
Q ss_pred -CcEEEEc-CCC--eEEEcC--CcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEee-
Q 018474 114 -KGLLKVT-EEG--VEAIVP--DASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH- 186 (355)
Q Consensus 114 -~gl~~~~-~~g--~~~~~~--~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~- 186 (355)
+.+..++ .++ +..+.. ....+.+++++++|.+.++.+. .+.+..||..+++.....
T Consensus 191 d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~-----------------dg~i~iwd~~~~~~~~~~~ 253 (437)
T 3gre_A 191 LSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTT-----------------RGIIDIWDIRFNVLIRSWS 253 (437)
T ss_dssp TSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEET-----------------TSCEEEEETTTTEEEEEEB
T ss_pred CCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcC-----------------CCeEEEEEcCCccEEEEEe
Confidence 4455666 455 555544 2367899999999977665433 456888888776653322
Q ss_pred -ccccccccEEEe----CCCCEEEEEeCCCCeEEEEEeCC
Q 018474 187 -EGFYFANGIALS----KNEDFVVVCESWKFRCRRYWLKG 221 (355)
Q Consensus 187 -~~~~~pngi~~~----~dg~~l~v~~~~~~~i~~~~~~~ 221 (355)
........++++ +|++ ++++....+.|..|+++.
T Consensus 254 ~~~~~~v~~~~~~~~~s~~~~-~l~s~~~dg~i~iwd~~~ 292 (437)
T 3gre_A 254 FGDHAPITHVEVCQFYGKNSV-IVVGGSSKTFLTIWNFVK 292 (437)
T ss_dssp CTTCEEEEEEEECTTTCTTEE-EEEEESTTEEEEEEETTT
T ss_pred cCCCCceEEEEeccccCCCcc-EEEEEcCCCcEEEEEcCC
Confidence 222223456444 5565 555555667788888753
No 276
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=97.89 E-value=0.00077 Score=62.45 Aligned_cols=179 Identities=12% Similarity=0.083 Sum_probs=106.4
Q ss_pred CCCceEEEee-CCCeEEEEecCC----EEEEEEcCCCeeEEeeccC--------------CCcccCeEECC---CCCEEE
Q 018474 52 NHPEDVSVVV-SKGALYTATRDG----WVKYFILHNETLVNWKHID--------------SQSLLGLTTTK---DGGVIL 109 (355)
Q Consensus 52 ~~p~~i~~d~-~~g~l~~~~~~g----~i~~~~~~~g~~~~~~~~~--------------~~p~~gl~~d~---~g~L~v 109 (355)
....+|++|+ +.+.+|+++..| .|++.+.....++.+.... .+.. ++++|+ .++||+
T Consensus 55 ~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~-~l~~~~~~~~~~l~~ 133 (394)
T 3b7f_A 55 HTIHHIVQDPREPERMLMAARTGHLGPTVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVF-WLTPGHASEPGTWYA 133 (394)
T ss_dssp SEEEEEEECSSSTTCEEEEEEC--CCEEEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEE-EEEECCTTSTTCEEE
T ss_pred CceEEEEECCCCCCeEEEEecCCCCCccEEEeCCCCCCceECCccccCCCccccccccccccee-EEEeCCCCCCCEEEE
Confidence 4567899995 367899998877 7888765344566543210 1234 577884 688999
Q ss_pred EeCCCcEEEEcCCC--eEEEcCC-------------------cCCcccEEEcc--CCcEEEEeCCCCCCCcccccccccc
Q 018474 110 CDNEKGLLKVTEEG--VEAIVPD-------------------ASFTNDVIAAS--DGTLYFTVASTKYTPTDFYKDMAEG 166 (355)
Q Consensus 110 ~~~~~gl~~~~~~g--~~~~~~~-------------------~~~~~~l~~d~--dG~ly~~d~~~~~~~~~~~~~~~~~ 166 (355)
+...++|++.+..| .+.+... ...+.+|++|+ .++||++..
T Consensus 134 g~~~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~---------------- 197 (394)
T 3b7f_A 134 GTSPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMS---------------- 197 (394)
T ss_dssp EEETTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEE----------------
T ss_pred EecCCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEEC----------------
Confidence 88777899887554 4444210 02345788886 357998743
Q ss_pred CCCCeEEEEeCCCCeEEEeecccc-------------ccccEEEeCC-CCEEEEEeCCCCeEEEEEeCCCCCcceeEecc
Q 018474 167 KPYGQLRKYDPKLKETTVLHEGFY-------------FANGIALSKN-EDFVVVCESWKFRCRRYWLKGDRAGILDAFIE 232 (355)
Q Consensus 167 ~~~g~l~~~dp~~~~~~~~~~~~~-------------~pngi~~~~d-g~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~ 232 (355)
.+++++.+..+..++.+..... ....|+++++ ...+|+.. .++|++.+-.+. +.+.+..
T Consensus 198 --~ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~--~~gl~~s~D~G~---tW~~~~~ 270 (394)
T 3b7f_A 198 --SGGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQN--HCGIYRMDRREG---VWKRIGD 270 (394)
T ss_dssp --TBEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEE--TTEEEEEETTTT---EEECGGG
T ss_pred --CCCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEc--CCeEEEeCCCCC---cceECCC
Confidence 2468877665566665543211 1245778875 35688765 367887764332 2222221
Q ss_pred cCCC----CcCceEEC--CCCCEEEEee
Q 018474 233 NLPG----GPDNINLA--PDGSFWIGLI 254 (355)
Q Consensus 233 ~~~g----~p~~i~~d--~~G~lwv~~~ 254 (355)
.++. +...+.+| ..+.+|+++.
T Consensus 271 ~l~~~~~~~~~~i~~~p~~~~~l~~~t~ 298 (394)
T 3b7f_A 271 AMPREVGDIGFPIVVHQRDPRTVWVFPM 298 (394)
T ss_dssp GSCTTTCSCEEEEEECSSCTTCEEEEEC
T ss_pred CCCCCCccceEEEEECCCCCCEEEEEec
Confidence 2221 11235666 4578999874
No 277
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=97.88 E-value=0.011 Score=51.86 Aligned_cols=183 Identities=13% Similarity=0.116 Sum_probs=101.7
Q ss_pred CCCceEEEeeCCCeEEEEecCCEEEEEEcCCC--ee-EEeeccCCCcccCeEECC--CCCEEEEeCCCcEEEE-c-CCC-
Q 018474 52 NHPEDVSVVVSKGALYTATRDGWVKYFILHNE--TL-VNWKHIDSQSLLGLTTTK--DGGVILCDNEKGLLKV-T-EEG- 123 (355)
Q Consensus 52 ~~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g--~~-~~~~~~~~~p~~gl~~d~--~g~L~v~~~~~gl~~~-~-~~g- 123 (355)
..-.++++++++..|.+++.++.|..++..++ +. ..+....+.+. ++++.+ +|+++++...++.+++ + .++
T Consensus 10 ~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~-~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~ 88 (297)
T 2pm7_B 10 EMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVW-RVDWAHPKFGTILASCSYDGKVMIWKEENGR 88 (297)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEE-EEEECCGGGCSEEEEEETTTEEEEEEBSSSC
T ss_pred CceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeE-EEEecCCCcCCEEEEEcCCCEEEEEEcCCCc
Confidence 34467889877778888899999999998543 22 22222233456 788854 4776665545554444 4 343
Q ss_pred ---eEEEcCCcCCcccEEEccC--CcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCe---EEEeeccccccccE
Q 018474 124 ---VEAIVPDASFTNDVIAASD--GTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKE---TTVLHEGFYFANGI 195 (355)
Q Consensus 124 ---~~~~~~~~~~~~~l~~d~d--G~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~---~~~~~~~~~~pngi 195 (355)
...+......++++++.|+ |.+.++.+. .+.+..||..++. ...+.......+.+
T Consensus 89 ~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~-----------------d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~ 151 (297)
T 2pm7_B 89 WSQIAVHAVHSASVNSVQWAPHEYGPMLLVASS-----------------DGKVSVVEFKENGTTSPIIIDAHAIGVNSA 151 (297)
T ss_dssp BCCCEEECCCSSCEEEEEECCGGGCSEEEEEET-----------------TSEEEEEEBCSSSCBCCEEEECCSSCEEEE
T ss_pred eEEEEEeecCCCceeEEEeCcCCCCcEEEEEEC-----------------CCcEEEEEecCCCceeeeeeecccCccceE
Confidence 2333333356888999886 666555332 4566667654432 11122122234567
Q ss_pred EEeCC-------------CCEEEEEeCCCCeEEEEEeCCCCCc--ceeEecccCCCCcCceEECCCC---CEEEEee
Q 018474 196 ALSKN-------------EDFVVVCESWKFRCRRYWLKGDRAG--ILDAFIENLPGGPDNINLAPDG---SFWIGLI 254 (355)
Q Consensus 196 ~~~~d-------------g~~l~v~~~~~~~i~~~~~~~~~~~--~~~~~~~~~~g~p~~i~~d~~G---~lwv~~~ 254 (355)
+++|+ ++ .+++....+.|..|+++..... ....+. ........+.+++++ ++.++..
T Consensus 152 ~~~p~~~~~~~~~~~~~~~~-~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~-~H~~~V~~v~~sp~~~~~~~las~s 226 (297)
T 2pm7_B 152 SWAPATIEEDGEHNGTKESR-KFVTGGADNLVKIWKYNSDAQTYVLESTLE-GHSDWVRDVAWSPTVLLRSYMASVS 226 (297)
T ss_dssp EECCCC------------CC-EEEEEETTSCEEEEEEETTTTEEEEEEEEC-CCSSCEEEEEECCCCSSSEEEEEEE
T ss_pred eecCCcccccccCCCCCCcc-eEEEEcCCCcEEEEEEcCCCceEEEEEEec-CCCCceEEEEECCCCCCceEEEEEE
Confidence 77776 34 4555556678888887543211 111121 222334557788875 4554443
No 278
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.86 E-value=0.012 Score=54.66 Aligned_cols=219 Identities=10% Similarity=0.055 Sum_probs=121.6
Q ss_pred eEEEeeCCCeEEEEecCCEEEEEEcCCCeeEEeecc-CCCcccCeEECCCCC-EEEEeCCCcEEEEc-CCC--eEEEcCC
Q 018474 56 DVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHI-DSQSLLGLTTTKDGG-VILCDNEKGLLKVT-EEG--VEAIVPD 130 (355)
Q Consensus 56 ~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~~~~-~~~p~~gl~~d~~g~-L~v~~~~~gl~~~~-~~g--~~~~~~~ 130 (355)
++.. +++.+.+++.+|.|..+|..+++....... ...+. ++.+ +++ |+.+...+.+..++ .++ +..+...
T Consensus 138 ~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~-~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h 212 (435)
T 1p22_A 138 CLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVL-CLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHH 212 (435)
T ss_dssp EEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEE-EEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCC
T ss_pred EEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEE-EEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCC
Confidence 4444 477888899999999999988765543332 23455 6666 455 44455444466666 455 5555443
Q ss_pred cCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEE---Eeecc-ccccccEEEeCCCCEEEE
Q 018474 131 ASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETT---VLHEG-FYFANGIALSKNEDFVVV 206 (355)
Q Consensus 131 ~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~---~~~~~-~~~pngi~~~~dg~~l~v 206 (355)
...+.++.+++ ...++.+. .+.+..||..+++.. ....+ ......+++ +++.++.
T Consensus 213 ~~~v~~l~~~~--~~l~s~s~-----------------dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s 271 (435)
T 1p22_A 213 CEAVLHLRFNN--GMMVTCSK-----------------DRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVS 271 (435)
T ss_dssp CSCEEEEECCT--TEEEEEET-----------------TSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEE
T ss_pred CCcEEEEEEcC--CEEEEeeC-----------------CCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEE
Confidence 35566666653 23333222 456778887655422 11111 122233444 6775555
Q ss_pred EeCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCCEEEEeecCCchhhHhhhcchhHHHHHHhccchhhcccC
Q 018474 207 CESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLP 286 (355)
Q Consensus 207 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (355)
+ ...+.|..|+++... ....+. ........+.. +|++.++....
T Consensus 272 ~-~~dg~i~vwd~~~~~--~~~~~~-~~~~~v~~~~~--~~~~l~~g~~d------------------------------ 315 (435)
T 1p22_A 272 A-SGDRTIKVWNTSTCE--FVRTLN-GHKRGIACLQY--RDRLVVSGSSD------------------------------ 315 (435)
T ss_dssp E-ETTSEEEEEETTTCC--EEEEEE-CCSSCEEEEEE--ETTEEEEEETT------------------------------
T ss_pred E-eCCCeEEEEECCcCc--EEEEEc-CCCCcEEEEEe--CCCEEEEEeCC------------------------------
Confidence 5 456789999975432 122221 22221223444 35555444331
Q ss_pred CCCCCceEEEEEeCCCCeEEEEEECCCCCcccceeEEEEeCCEEEEeecCCCeEEEeeCCC
Q 018474 287 MGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFDGNLYLASLQSNFIGILPLDG 347 (355)
Q Consensus 287 ~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~~~i~~~~~~~ 347 (355)
+.|..+|..+++.+..+..+.+ .+..+..++..|..|+. .+.|..+++..
T Consensus 316 ------g~i~iwd~~~~~~~~~~~~h~~----~v~~~~~~~~~l~sg~~-dg~i~vwd~~~ 365 (435)
T 1p22_A 316 ------NTIRLWDIECGACLRVLEGHEE----LVRCIRFDNKRIVSGAY-DGKIKVWDLVA 365 (435)
T ss_dssp ------SCEEEEETTTCCEEEEECCCSS----CEEEEECCSSEEEEEET-TSCEEEEEHHH
T ss_pred ------CeEEEEECCCCCEEEEEeCCcC----cEEEEEecCCEEEEEeC-CCcEEEEECCC
Confidence 3577788757888877765443 35555555566666664 67788777643
No 279
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=97.85 E-value=0.0018 Score=57.26 Aligned_cols=153 Identities=10% Similarity=-0.015 Sum_probs=90.0
Q ss_pred CCCCceEEEeeC--CCeEEEEecCCEEEEEEcCCCe----------eEEeeccCCCcccCeEECCC--CCEEEEeCCCc-
Q 018474 51 VNHPEDVSVVVS--KGALYTATRDGWVKYFILHNET----------LVNWKHIDSQSLLGLTTTKD--GGVILCDNEKG- 115 (355)
Q Consensus 51 ~~~p~~i~~d~~--~g~l~~~~~~g~i~~~~~~~g~----------~~~~~~~~~~p~~gl~~d~~--g~L~v~~~~~g- 115 (355)
-....++++.+. +..|++++.+|.|..+|..+++ ...+......+. ++++.++ ++++++...+|
T Consensus 57 ~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~l~~~~~dg~ 135 (351)
T 3f3f_A 57 DSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLY-SVKFAPAHLGLKLACLGNDGI 135 (351)
T ss_dssp SSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEE-EEEECCGGGCSEEEEEETTCE
T ss_pred CCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCcee-EEEEcCCCCCcEEEEecCCCc
Confidence 355678888852 6778888899999999987652 222222234566 8899887 87555443444
Q ss_pred EEEEc-CCC--eEEEc-------------CCcCCcccEEEccC---CcEEEEeCCCCCCCccccccccccCCCCeEEEEe
Q 018474 116 LLKVT-EEG--VEAIV-------------PDASFTNDVIAASD---GTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYD 176 (355)
Q Consensus 116 l~~~~-~~g--~~~~~-------------~~~~~~~~l~~d~d---G~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~d 176 (355)
+..++ .++ +..+. .....+..+.+.++ +.++++... .+.+..++
T Consensus 136 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~-----------------~~~~~~~~ 198 (351)
T 3f3f_A 136 LRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSAL-----------------EQAIIYQR 198 (351)
T ss_dssp EEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEET-----------------TEEEEEEE
T ss_pred EEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecC-----------------CCcEEEEc
Confidence 55556 333 11110 01145667778775 555544322 34455555
Q ss_pred CCCCeEEEee---ccccccccEEEeCCCC---EEEEEeCCCCeEEEEEeCC
Q 018474 177 PKLKETTVLH---EGFYFANGIALSKNED---FVVVCESWKFRCRRYWLKG 221 (355)
Q Consensus 177 p~~~~~~~~~---~~~~~pngi~~~~dg~---~l~v~~~~~~~i~~~~~~~ 221 (355)
...++..... ........++++|++. .++++....+.|..|+++.
T Consensus 199 ~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~ 249 (351)
T 3f3f_A 199 GKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITE 249 (351)
T ss_dssp CTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEE
T ss_pred cCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCC
Confidence 5555543222 1223346789999982 3555555677888888753
No 280
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=97.84 E-value=0.0019 Score=64.90 Aligned_cols=133 Identities=9% Similarity=-0.046 Sum_probs=79.4
Q ss_pred ceEEEeeCCCeEEEEecCCEEEEEEcCCCeeEEeeccCC-Ccc----cCeEECCCCCE-EEEeCC---------CcEEEE
Q 018474 55 EDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHIDS-QSL----LGLTTTKDGGV-ILCDNE---------KGLLKV 119 (355)
Q Consensus 55 ~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~~~~~~-~p~----~gl~~d~~g~L-~v~~~~---------~gl~~~ 119 (355)
.++.+.+ ++.++... +|.|+.++..+|+...+..... ... ..+.+.+||+. .++... ..++.+
T Consensus 20 ~~~~w~~-dg~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~ 97 (740)
T 4a5s_A 20 YSLRWIS-DHEYLYKQ-ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIY 97 (740)
T ss_dssp CCEEECS-SSEEEEEE-TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEE
T ss_pred cccEECC-CCcEEEEc-CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEE
Confidence 3677884 44444444 8999999998887665533211 111 02677899974 443321 235567
Q ss_pred c-CCC-eEEEcCCcCCcccEEEccCC-cEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeeccc-------
Q 018474 120 T-EEG-VEAIVPDASFTNDVIAASDG-TLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGF------- 189 (355)
Q Consensus 120 ~-~~g-~~~~~~~~~~~~~l~~d~dG-~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~~------- 189 (355)
+ .+| .+.+..........+++||| .|.++. .+.|+.+|..+++.+.+....
T Consensus 98 d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~-------------------~~~i~~~~~~~~~~~~lt~~g~~~~~~~ 158 (740)
T 4a5s_A 98 DLNKRQLITEERIPNNTQWVTWSPVGHKLAYVW-------------------NNDIYVKIEPNLPSYRITWTGKEDIIYN 158 (740)
T ss_dssp ETTTTEECCSSCCCTTEEEEEECSSTTCEEEEE-------------------TTEEEEESSTTSCCEECCSCCBTTTEEE
T ss_pred ECCCCcEEEcccCCCcceeeEECCCCCEEEEEE-------------------CCeEEEEECCCCceEEEcCCCCccceec
Confidence 7 456 55444433456778899999 455542 235777877666654442211
Q ss_pred ------------cccccEEEeCCCCEEEEEe
Q 018474 190 ------------YFANGIALSKNEDFVVVCE 208 (355)
Q Consensus 190 ------------~~pngi~~~~dg~~l~v~~ 208 (355)
....++++||||+.|.+..
T Consensus 159 g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~ 189 (740)
T 4a5s_A 159 GITDWVYEEEVFSAYSALWWSPNGTFLAYAQ 189 (740)
T ss_dssp SBCCHHHHHHTSSSSBCEEECTTSSEEEEEE
T ss_pred CcccccccchhcCCCcceEECCCCCEEEEEE
Confidence 1123588999999777653
No 281
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.83 E-value=0.015 Score=56.90 Aligned_cols=53 Identities=19% Similarity=0.226 Sum_probs=38.3
Q ss_pred eEEEEEeCCCCeEEEEEECCCCCcccceeEEEEeCCEEEEeecC----------------------CCeEEEeeCCC
Q 018474 293 ARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFDGNLYLASLQ----------------------SNFIGILPLDG 347 (355)
Q Consensus 293 ~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~----------------------~~~i~~~~~~~ 347 (355)
+.+..||.++|+.+-.+..+.+.....+ ..+.+|++||+... +++|..|.|+.
T Consensus 507 g~l~A~D~~tG~~lW~~~~~~g~~a~P~--~y~~~G~qYv~~~~G~gg~~~~~~~~~~~~~~~~~~g~~~~~f~l~~ 581 (582)
T 1flg_A 507 GYFKAFDAKSGKELWKFQTGSGIVSPPI--TWEQDGEQYLGVTVGYGGAVPLWGGDMADLTRPVAQGGSFWVFKLPS 581 (582)
T ss_dssp SEEEEEETTTCCEEEEEECSSCCCSCCE--EEEETTEEEEEEEECCCSHHHHHCTHHHHHHTTCCCCCEEEEEECCC
T ss_pred CcEEEEECCCCCEEEEecCCCCcccCce--EEEECCEEEEEEEccCCCcccccccccccccccCCCCCEEEEEeCCC
Confidence 5799999879999999988776432222 33578999997543 36788888765
No 282
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=97.82 E-value=0.0071 Score=53.82 Aligned_cols=150 Identities=13% Similarity=0.066 Sum_probs=86.8
Q ss_pred CCCceEEEeeCCCeEEEEecCCEEEEEEcCCCeeE---EeeccCCCcccCeEECC--CCCEEEEeCCCc-EEEEc-CCC-
Q 018474 52 NHPEDVSVVVSKGALYTATRDGWVKYFILHNETLV---NWKHIDSQSLLGLTTTK--DGGVILCDNEKG-LLKVT-EEG- 123 (355)
Q Consensus 52 ~~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~---~~~~~~~~p~~gl~~d~--~g~L~v~~~~~g-l~~~~-~~g- 123 (355)
..-.++++++++..|..++.|+.|..+|..+++.. .+....+.+. .+++.+ +|+++++...++ +..++ .++
T Consensus 14 ~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~-~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~ 92 (316)
T 3bg1_A 14 DMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVW-QVAWAHPMYGNILASCSYDRKVIIWREENGT 92 (316)
T ss_dssp CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEE-EEEECCGGGSSCEEEEETTSCEEEECCSSSC
T ss_pred CeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEE-EEEeCCCCCCCEEEEEECCCEEEEEECCCCc
Confidence 34567888877777888899999999998766432 2222234466 788864 366555443444 55555 344
Q ss_pred ---eEEEcCCcCCcccEEEccC--CcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCC-eEEEee--cc-cccccc
Q 018474 124 ---VEAIVPDASFTNDVIAASD--GTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLK-ETTVLH--EG-FYFANG 194 (355)
Q Consensus 124 ---~~~~~~~~~~~~~l~~d~d--G~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~-~~~~~~--~~-~~~png 194 (355)
...+......+++++++|+ |.+.++.+. .+.+..||..++ ...... .. ...-+.
T Consensus 93 ~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~-----------------D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~ 155 (316)
T 3bg1_A 93 WEKSHEHAGHDSSVNSVCWAPHDYGLILACGSS-----------------DGAISLLTYTGEGQWEVKKINNAHTIGCNA 155 (316)
T ss_dssp CCEEEEECCCSSCCCEEEECCTTTCSCEEEECS-----------------SSCEEEEEECSSSCEEECCBTTSSSSCBCC
T ss_pred ceEEEEccCCCCceEEEEECCCCCCcEEEEEcC-----------------CCCEEEEecCCCCCcceeeeeccccCCcce
Confidence 2223333367889999987 666555433 345666665443 222111 11 112345
Q ss_pred EEEeCCC-----------------CEEEEEeCCCCeEEEEEeC
Q 018474 195 IALSKNE-----------------DFVVVCESWKFRCRRYWLK 220 (355)
Q Consensus 195 i~~~~dg-----------------~~l~v~~~~~~~i~~~~~~ 220 (355)
++++|+. + .+++....+.|..++++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~-~l~sgs~D~~v~lWd~~ 197 (316)
T 3bg1_A 156 VSWAPAVVPGSLIDHPSGQKPNYIK-RFASGGCDNLIKLWKEE 197 (316)
T ss_dssp CEECCCCCC------CCSCCCCCCC-BEECCBTTSBCCEEEEC
T ss_pred EEEccccCCccccccccccCccccc-eEEEecCCCeEEEEEeC
Confidence 6777762 3 45555556777778774
No 283
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=97.78 E-value=0.009 Score=57.76 Aligned_cols=136 Identities=4% Similarity=-0.086 Sum_probs=80.0
Q ss_pred cccCeEECCCCCEEEEeCCCc-EEEEcCCC-eEEEcCCc-----CCcccEEEccCCcEEEEeCCCCCCCccccccccccC
Q 018474 95 SLLGLTTTKDGGVILCDNEKG-LLKVTEEG-VEAIVPDA-----SFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGK 167 (355)
Q Consensus 95 p~~gl~~d~~g~L~v~~~~~g-l~~~~~~g-~~~~~~~~-----~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~ 167 (355)
+. ++++.++|...++....| +..++.++ +..+. .. ..+++++++|||++.++.+.
T Consensus 88 V~-~vawSPdG~~LAs~s~dg~V~iwd~~~~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~---------------- 149 (588)
T 2j04_A 88 PR-VCKPSPIDDWMAVLSNNGNVSVFKDNKMLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNE---------------- 149 (588)
T ss_dssp EE-EEEECSSSSCEEEEETTSCEEEEETTEEEEECC-CSSCSTTTCEEEEEECSSSSCEEEEET----------------
T ss_pred EE-EEEECCCCCEEEEEeCCCcEEEEeCCceeeecc-CCCccccccEEEEEEcCCCCEEEEEcC----------------
Confidence 55 788999998555444444 55555555 55444 21 35889999999965554322
Q ss_pred CCCeEEEEeCCCCe--------EEEeecc----ccccccEEEeCCCCEEEEEeCCCCeEEEEEeCCCCCcc-eeEecccC
Q 018474 168 PYGQLRKYDPKLKE--------TTVLHEG----FYFANGIALSKNEDFVVVCESWKFRCRRYWLKGDRAGI-LDAFIENL 234 (355)
Q Consensus 168 ~~g~l~~~dp~~~~--------~~~~~~~----~~~pngi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~-~~~~~~~~ 234 (355)
.|.+-.||.++++ +..+... ...-..++++||| + ++....+.+..+++++....+ ...+....
T Consensus 150 -DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--L-aass~D~tVrlWd~~~~~~~~~~~tL~~~h 225 (588)
T 2j04_A 150 -DGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--L-VAALSNNSVFSMTVSASSHQPVSRMIQNAS 225 (588)
T ss_dssp -TSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--E-EEEETTCCEEEECCCSSSSCCCEEEEECCC
T ss_pred -CCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--E-EEEeCCCeEEEEECCCCccccceeeecccc
Confidence 5678888887764 2333211 1245678999998 3 444557889999887654321 12221112
Q ss_pred CCCcCceEECCCCCEEEEee
Q 018474 235 PGGPDNINLAPDGSFWIGLI 254 (355)
Q Consensus 235 ~g~p~~i~~d~~G~lwv~~~ 254 (355)
......+++. |+..+++.
T Consensus 226 ~~~V~svaFs--g~~LASa~ 243 (588)
T 2j04_A 226 RRKITDLKIV--DYKVVLTC 243 (588)
T ss_dssp SSCCCCEEEE--TTEEEEEC
T ss_pred cCcEEEEEEE--CCEEEEEe
Confidence 2234556675 45555553
No 284
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.75 E-value=0.0098 Score=55.37 Aligned_cols=143 Identities=13% Similarity=0.114 Sum_probs=83.3
Q ss_pred CCceEEEeeCCCeEEEEecCCEEEEEEcCCCeeEEeecc-CCCcccCeEECCCCCEEEEeCCCcEEEEc-CCC--e---E
Q 018474 53 HPEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHI-DSQSLLGLTTTKDGGVILCDNEKGLLKVT-EEG--V---E 125 (355)
Q Consensus 53 ~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~~~~-~~~p~~gl~~d~~g~L~v~~~~~gl~~~~-~~g--~---~ 125 (355)
...++.+ ++..+++++.+|.|..+|..+++....... ...+. +++++ ++.++.+...+.+..++ .++ . .
T Consensus 175 ~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~-~l~~~-~~~l~s~s~dg~i~vwd~~~~~~~~~~~ 250 (435)
T 1p22_A 175 SVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVL-HLRFN-NGMMVTCSKDRSIAVWDMASPTDITLRR 250 (435)
T ss_dssp CEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEE-EEECC-TTEEEEEETTSCEEEEECSSSSCCEEEE
T ss_pred cEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEE-EEEEc-CCEEEEeeCCCcEEEEeCCCCCCceeee
Confidence 3445555 467888899999999999988865443322 23355 66665 34566666555566666 333 3 3
Q ss_pred EEcCCcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeecc-ccccccEEEeCCCCEE
Q 018474 126 AIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEG-FYFANGIALSKNEDFV 204 (355)
Q Consensus 126 ~~~~~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~-~~~pngi~~~~dg~~l 204 (355)
.+......+..+.+ +|+..++.+. .+.+..||..+++....... ......+++ +++.+
T Consensus 251 ~~~~~~~~v~~~~~--~~~~l~s~~~-----------------dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l 309 (435)
T 1p22_A 251 VLVGHRAAVNVVDF--DDKYIVSASG-----------------DRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLV 309 (435)
T ss_dssp EECCCSSCEEEEEE--ETTEEEEEET-----------------TSEEEEEETTTCCEEEEEECCSSCEEEEEE--ETTEE
T ss_pred EecCCCCcEEEEEe--CCCEEEEEeC-----------------CCeEEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEE
Confidence 33333345666666 4544444322 56788899877765433322 122233444 56644
Q ss_pred EEEeCCCCeEEEEEeCC
Q 018474 205 VVCESWKFRCRRYWLKG 221 (355)
Q Consensus 205 ~v~~~~~~~i~~~~~~~ 221 (355)
++....+.|..|+++.
T Consensus 310 -~~g~~dg~i~iwd~~~ 325 (435)
T 1p22_A 310 -VSGSSDNTIRLWDIEC 325 (435)
T ss_dssp -EEEETTSCEEEEETTT
T ss_pred -EEEeCCCeEEEEECCC
Confidence 4445667899999854
No 285
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=97.74 E-value=0.0011 Score=64.06 Aligned_cols=149 Identities=14% Similarity=0.038 Sum_probs=94.7
Q ss_pred CCceEEEeeCCCeEEEEecCCEEEEEEcCCCee--EEeeccCCCcccCe--EECCCC-CEEEEeCCCcEEEE-c-CCC--
Q 018474 53 HPEDVSVVVSKGALYTATRDGWVKYFILHNETL--VNWKHIDSQSLLGL--TTTKDG-GVILCDNEKGLLKV-T-EEG-- 123 (355)
Q Consensus 53 ~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~--~~~~~~~~~p~~gl--~~d~~g-~L~v~~~~~gl~~~-~-~~g-- 123 (355)
...++++. .++.|.+++.||.|..+|..++.. ..+......+. ++ ++.++| +++++...++.+++ + .++
T Consensus 268 ~v~sv~~s-~~~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~-sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~ 345 (524)
T 2j04_B 268 LITTFDFL-SPTTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYIL-SVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIAT 345 (524)
T ss_dssp CEEEEEES-SSSEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEE-EEEEECCTTSCCEEEEEETTSEEEEECGGGHHH
T ss_pred CEEEEEec-CCCeEEEEeCCCEEEEEECCCCCCceEEeecccccEE-EEEEEcCCCCCeEEEEeccCCeEEEEECCCCCc
Confidence 45678887 467888999999999999876532 12222223455 67 456777 77776656665555 4 344
Q ss_pred eEEEcCCc--CCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeE-EEeeccccccccEEEeCC
Q 018474 124 VEAIVPDA--SFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKET-TVLHEGFYFANGIALSKN 200 (355)
Q Consensus 124 ~~~~~~~~--~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~-~~~~~~~~~pngi~~~~d 200 (355)
...+.... ..+..++++|+|..+++.+. .+.+..||..++.. ..+.......+.++++|+
T Consensus 346 ~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~-----------------d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~ 408 (524)
T 2j04_B 346 TKTTVSRFRGSNLVPVVYCPQIYSYIYSDG-----------------ASSLRAVPSRAAFAVHPLVSRETTITAIGVSRL 408 (524)
T ss_dssp HCEEEEECSCCSCCCEEEETTTTEEEEECS-----------------SSEEEEEETTCTTCCEEEEECSSCEEEEECCSS
T ss_pred ccccccccccCcccceEeCCCcCeEEEeCC-----------------CCcEEEEECcccccceeeecCCCceEEEEeCCC
Confidence 33332211 24678999999987776543 34677788766542 333333344578999999
Q ss_pred CCEEEEEeCCCCeEEEEEeCC
Q 018474 201 EDFVVVCESWKFRCRRYWLKG 221 (355)
Q Consensus 201 g~~l~v~~~~~~~i~~~~~~~ 221 (355)
++.+ ++....+.|..+++..
T Consensus 409 g~~l-~Sgs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 409 HPMV-LAGSADGSLIITNAAR 428 (524)
T ss_dssp CCBC-EEEETTTEEECCBSCS
T ss_pred CCeE-EEEECCCEEEEEechH
Confidence 9854 5555677888887643
No 286
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=97.74 E-value=0.028 Score=52.02 Aligned_cols=233 Identities=10% Similarity=0.053 Sum_probs=129.1
Q ss_pred CCceEEEeeCCCeEEEEecCCEEEEEEcCCCeeEEeecc---CCCcccCeEECCCCCEEEEeCCCc-EEEEc-CCC--eE
Q 018474 53 HPEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHI---DSQSLLGLTTTKDGGVILCDNEKG-LLKVT-EEG--VE 125 (355)
Q Consensus 53 ~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~~~~---~~~p~~gl~~d~~g~L~v~~~~~g-l~~~~-~~g--~~ 125 (355)
....|.+. .++.|-++. ++.|+.+|..+|+....... ...+. ++++.++|+++++...+| +..++ .++ +.
T Consensus 107 y~~~l~wS-~~n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~-sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~ 183 (420)
T 4gga_A 107 YLNLVDWS-SGNVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYIS-SVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLR 183 (420)
T ss_dssp TCBCEEEC-TTSEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEE-EEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred cceeEEEC-CCCEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEE-EEEECCCCCEEEEEECCCeEEEEEcCCCcEEE
Confidence 35567887 566666665 89999999999987654332 23467 899999998665444444 55555 455 44
Q ss_pred EEcCCcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCe--EEEeeccccccccEEEeCCCCE
Q 018474 126 AIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKE--TTVLHEGFYFANGIALSKNEDF 203 (355)
Q Consensus 126 ~~~~~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~--~~~~~~~~~~pngi~~~~dg~~ 203 (355)
.+......+..+ +.++.+.++.+. .+.+..+|..... ...+........++.++++++.
T Consensus 184 ~~~~h~~~v~~~--s~~~~~l~sgs~-----------------d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~ 244 (420)
T 4gga_A 184 NMTSHSARVGSL--SWNSYILSSGSR-----------------SGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRH 244 (420)
T ss_dssp EECCCSSCEEEE--EEETTEEEEEET-----------------TSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSE
T ss_pred EEeCCCCceEEE--eeCCCEEEEEeC-----------------CCceeEeeecccceeeEEecccccceeeeeecCCCCe
Confidence 444332334333 344555554322 4456666654432 2233333344567889999996
Q ss_pred EEEEeCCCCeEEEEEeCCCCCc--ceeEecccCCCCcCceEECCCC-CEEEEeecCCchhhHhhhcchhHHHHHHhccch
Q 018474 204 VVVCESWKFRCRRYWLKGDRAG--ILDAFIENLPGGPDNINLAPDG-SFWIGLIKMNQTGVRAIQKCREKWELLDAYPGL 280 (355)
Q Consensus 204 l~v~~~~~~~i~~~~~~~~~~~--~~~~~~~~~~g~p~~i~~d~~G-~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (355)
+... ...+.+..++....... ...... ...+....+.+.+.+ ++.+...+
T Consensus 245 l~s~-~~D~~v~i~~~~~~~~~~~~~~~~~-~~~~~V~~~~~~p~~~~~la~~~g------------------------- 297 (420)
T 4gga_A 245 LASG-GNDNLVNVWPSAPGEGGWVPLQTFT-QHQGAVKAVAWCPWQSNVLATGGG------------------------- 297 (420)
T ss_dssp EEEE-ETTSCEEEEESSCCSSCSCCSEEEC-CCSSCEEEEEECTTCTTEEEEEEC-------------------------
T ss_pred eeee-eccccceEEeeccccccceeeeeec-ccCCceeeeeeCCCcccEEEEEee-------------------------
Confidence 5554 45677888887543211 111111 122222345555554 44433322
Q ss_pred hhcccCCCCCCceEEEEEeCCCCeEEEEEECCCCCcccceeEEEE--eCCEEEEee-cCCCeEEEeeCCCC
Q 018474 281 ISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAE--FDGNLYLAS-LQSNFIGILPLDGP 348 (355)
Q Consensus 281 ~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~--~~g~L~v~~-~~~~~i~~~~~~~~ 348 (355)
+..+.|..+|..+|+....+.... .+..+.. .++.|..++ ...+.|..+++++-
T Consensus 298 ---------s~D~~I~iwd~~t~~~~~~~~~~~-----~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~ 354 (420)
T 4gga_A 298 ---------TSDRHIRIWNVCSGACLSAVDAHS-----QVCSILWSPHYKELISGHGFAQNQLVIWKYPTM 354 (420)
T ss_dssp ---------TTTCEEEEEETTTTEEEEEEECSS-----CEEEEEEETTTTEEEEEECTTTCCEEEEETTTC
T ss_pred ---------cCCCEEEEEeCCccccceeecccc-----ceeeeeecCCCCeEEEEEecCCCEEEEEECCCC
Confidence 222456667776777777665533 2333333 236666654 34566777776543
No 287
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.72 E-value=0.035 Score=55.11 Aligned_cols=54 Identities=17% Similarity=0.343 Sum_probs=37.9
Q ss_pred eEEEEEeCCCCeEEEEEECCCCCcccceeEEEEeCCEEEEeecC---------------------CCeEEEeeCCCC
Q 018474 293 ARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFDGNLYLASLQ---------------------SNFIGILPLDGP 348 (355)
Q Consensus 293 ~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~---------------------~~~i~~~~~~~~ 348 (355)
+.+..+|.++|+.+-.+..+.+.....+ ....+|++|++... .++|..+.+...
T Consensus 479 g~l~a~d~~tG~~l~~~~~~~~~~~~p~--~~~~~G~~yva~~~G~g~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~ 553 (668)
T 1kv9_A 479 GQMHAYSADKGEALWQFEAQSGIVAAPM--TFELAGRQYVAIMAGWGGVATLTGGESMNLPGMKNRSRLLVFALDGK 553 (668)
T ss_dssp SEEEEEETTTCCEEEEEECSSCCCSCCE--EEEETTEEEEEEEECCCSHHHHHCCGGGGSTTCCCCCEEEEEEETCC
T ss_pred ccchhhhhhcChhheEecCCCCcccCce--EEEECCEEEEEEEecCCCccccccccccccccCCCCCeEEEEEcCcc
Confidence 5799999878999999988765422222 23678999986544 357888877654
No 288
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=97.72 E-value=0.0084 Score=60.24 Aligned_cols=183 Identities=11% Similarity=0.046 Sum_probs=97.0
Q ss_pred eEEEeeCCCeEEEEe-cCC----EEEEEEcCCCeeEEeeccCCCcccCeEECCCCCEEEEeCCC--------------cE
Q 018474 56 DVSVVVSKGALYTAT-RDG----WVKYFILHNETLVNWKHIDSQSLLGLTTTKDGGVILCDNEK--------------GL 116 (355)
Q Consensus 56 ~i~~d~~~g~l~~~~-~~g----~i~~~~~~~g~~~~~~~~~~~p~~gl~~d~~g~L~v~~~~~--------------gl 116 (355)
++.+.|++..+..+. .+| .|+.+|..+|+............ ++++.+|..|+++.... .+
T Consensus 167 ~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~~~~-~~~wspD~~l~~~~~~~~~~~~~~~~~~~~~~v 245 (741)
T 1yr2_A 167 AWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWVKFS-GLAWLGNDALLYSRFAEPKEGQAFQALNYNQTV 245 (741)
T ss_dssp EEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEEESC-CCEESTTSEEEEEECCCC--------CCCCCEE
T ss_pred eEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCceec-cEEEECCCEEEEEEecCcccccccccCCCCCEE
Confidence 456775565554443 333 58889998887654321111224 78887774466665332 26
Q ss_pred EEEcC-CC-e--EEEcCCc---CCcccEEEccCCc-EEEEeCCCCCCCccccccccccCCCCeEEEEeCCCC--e-EEEe
Q 018474 117 LKVTE-EG-V--EAIVPDA---SFTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLK--E-TTVL 185 (355)
Q Consensus 117 ~~~~~-~g-~--~~~~~~~---~~~~~l~~d~dG~-ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~--~-~~~~ 185 (355)
++.+. ++ . +.+.... .+..++.+++||+ |.++.... ......++.+|.+++ + .+.+
T Consensus 246 ~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~-------------~~~~~~l~~~d~~~~~~~~~~~l 312 (741)
T 1yr2_A 246 WLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEG-------------TDPVNTVHVARVTNGKIGPVTAL 312 (741)
T ss_dssp EEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECT-------------TCSCCEEEEEEEETTEECCCEEE
T ss_pred EEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEcc-------------CCCcceEEEEECCCCCCcccEEe
Confidence 66663 33 1 2222221 2466788999995 55543220 011346888887666 4 5555
Q ss_pred eccccccccEEEeCCCCEEEEEeCC---CCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCCEEEEeec
Q 018474 186 HEGFYFANGIALSKNEDFVVVCESW---KFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIK 255 (355)
Q Consensus 186 ~~~~~~pngi~~~~dg~~l~v~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~ 255 (355)
......... .+++||+.+|+.... ..+|+++++++.. +..+.+.........++..+ ++.+++....
T Consensus 313 ~~~~~~~~~-~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~-~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~ 382 (741)
T 1yr2_A 313 IPDLKAQWD-FVDGVGDQLWFVSGDGAPLKKIVRVDLSGST-PRFDTVVPESKDNLESVGIA-GNRLFASYIH 382 (741)
T ss_dssp ECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEECSSSS-CEEEEEECCCSSEEEEEEEE-BTEEEEEEEE
T ss_pred cCCCCceEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCc-cccEEEecCCCCeEEEEEEE-CCEEEEEEEE
Confidence 433221222 246889988887542 4569999986532 23333332222222344454 3455555433
No 289
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=97.71 E-value=0.0019 Score=65.19 Aligned_cols=185 Identities=12% Similarity=0.057 Sum_probs=106.1
Q ss_pred CCCceEEEeeC--CCeEEEEecCCEEEEEEcCCCeeEEee---ccCCCcccCeEECCC--CCEEEEeCCCc-EEEEc-CC
Q 018474 52 NHPEDVSVVVS--KGALYTATRDGWVKYFILHNETLVNWK---HIDSQSLLGLTTTKD--GGVILCDNEKG-LLKVT-EE 122 (355)
Q Consensus 52 ~~p~~i~~d~~--~g~l~~~~~~g~i~~~~~~~g~~~~~~---~~~~~p~~gl~~d~~--g~L~v~~~~~g-l~~~~-~~ 122 (355)
..-.++.+.++ +..+.+++.+|.|..++..+++..... .....+. ++++.++ |+++++...+| +..++ .+
T Consensus 54 ~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~-~v~~sp~~~~~~l~sgs~dg~I~vwdl~~ 132 (753)
T 3jro_A 54 GPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVN-SVQWAPHEYGPLLLVASSDGKVSVVEFKE 132 (753)
T ss_dssp SCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEE-EEEECCGGGCSEEEEEETTSEEEEEECCS
T ss_pred CceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeE-EEEECCCCCCCEEEEEeCCCcEEEEEeec
Confidence 44567888755 677888899999999998887633222 2234566 8889887 77655544445 55555 22
Q ss_pred C----eEEEcCCcCCcccEEEcc-------------CCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCe--EE
Q 018474 123 G----VEAIVPDASFTNDVIAAS-------------DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKE--TT 183 (355)
Q Consensus 123 g----~~~~~~~~~~~~~l~~d~-------------dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~--~~ 183 (355)
+ ...+......+.++.+++ +|.+.++.+. .|.+..||..++. ..
T Consensus 133 ~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~-----------------dg~I~iwd~~~~~~~~~ 195 (753)
T 3jro_A 133 NGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGA-----------------DNLVKIWKYNSDAQTYV 195 (753)
T ss_dssp SSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEET-----------------TSCEEEEEEETTTTEEE
T ss_pred CCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEEC-----------------CCeEEEEeccCCcccce
Confidence 2 222323335677888887 3544443322 4567777654442 11
Q ss_pred E---eeccccccccEEEeCC---CCEEEEEeCCCCeEEEEEeCCCCCcceeEecc--cCCCCcCceEECCCCCEEEEeec
Q 018474 184 V---LHEGFYFANGIALSKN---EDFVVVCESWKFRCRRYWLKGDRAGILDAFIE--NLPGGPDNINLAPDGSFWIGLIK 255 (355)
Q Consensus 184 ~---~~~~~~~pngi~~~~d---g~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~--~~~g~p~~i~~d~~G~lwv~~~~ 255 (355)
. +.........++++|+ ++ .+++....+.|..|++............. ...+....+.++++|++.++...
T Consensus 196 ~~~~~~~h~~~V~~l~~sp~~~~~~-~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~ 274 (753)
T 3jro_A 196 LESTLEGHSDWVRDVAWSPTVLLRS-YLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGG 274 (753)
T ss_dssp EEEEECCCSSCEEEEEECCCCSSSE-EEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECS
T ss_pred eeeeecCCCCcEEEEEeccCCCCCC-EEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcC
Confidence 1 1112234567899999 66 44555567789999986532111111111 12233456788888875555433
No 290
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.69 E-value=0.054 Score=53.99 Aligned_cols=55 Identities=18% Similarity=0.283 Sum_probs=39.2
Q ss_pred eEEEEEeCCCCeEEEEEECCCCCcccceeEEEEeCCEEEEeecCC---------------------CeEEEeeCCCCC
Q 018474 293 ARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFDGNLYLASLQS---------------------NFIGILPLDGPE 349 (355)
Q Consensus 293 ~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~---------------------~~i~~~~~~~~~ 349 (355)
+.+..||.++|+.+-.+..+.+.....++ ...+|+.||+...+ +.+..|.|++..
T Consensus 496 g~l~a~D~~tG~~lw~~~~~~~~~~~p~t--y~~~G~qyv~~~~G~gg~~~~~~~~~~~~~~~~~g~~~~~f~l~~~~ 571 (689)
T 1yiq_A 496 GRVIAYAADTGEKLWEQPAASGVMAAPVT--YSVDGEQYVTFMAGWGGAFSTFAGALSLRAGVQPYAQVLTYKLGGTA 571 (689)
T ss_dssp SEEEEEETTTCCEEEEEECSSCCCSCCEE--EEETTEEEEEEEECCCTTHHHHTHHHHGGGCCCCCCEEEEEEETCCC
T ss_pred CcEEEEECCCCccceeeeCCCCcccCceE--EEECCEEEEEEEecCCccccccccccccccccCCCceEEEeecCCcc
Confidence 57999998789999899887664333332 36789999875533 477888887543
No 291
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=97.67 E-value=0.0058 Score=54.70 Aligned_cols=138 Identities=9% Similarity=-0.031 Sum_probs=79.5
Q ss_pred CCEEEEEEcCCCeeEEeeccCCCcccCeEECCCCC-EEEEeCCC-----cEEEEcC-CC-eEEEcCCcCCcccEEEccCC
Q 018474 72 DGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGG-VILCDNEK-----GLLKVTE-EG-VEAIVPDASFTNDVIAASDG 143 (355)
Q Consensus 72 ~g~i~~~~~~~g~~~~~~~~~~~p~~gl~~d~~g~-L~v~~~~~-----gl~~~~~-~g-~~~~~~~~~~~~~l~~d~dG 143 (355)
++.|+.++..+++...+ .... .+++.++|+ |.++.... .|+.++. +| .+.+..... +.++.++|||
T Consensus 42 ~~~l~~~d~~~~~~~~l----~~~~-~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~-~~~~~wspdg 115 (347)
T 2gop_A 42 ENTIVIENLKNNARRFI----ENAT-MPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN-IRSLEWNEDS 115 (347)
T ss_dssp EEEEEEEETTTCCEEEE----ESCE-EEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE-EEEEEECTTS
T ss_pred cceEEEEeCCCCceEEc----ccCC-CeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC-ccceeECCCC
Confidence 45788889877776655 3355 688999996 44433221 3777774 55 444433223 7888999999
Q ss_pred c-EEEEeCCCCC----C-Ccccccc----ccccCCCCeEEEEeCCCCeE-EEeeccccccccEEEeCCCCEEEEEeCC--
Q 018474 144 T-LYFTVASTKY----T-PTDFYKD----MAEGKPYGQLRKYDPKLKET-TVLHEGFYFANGIALSKNEDFVVVCESW-- 210 (355)
Q Consensus 144 ~-ly~~d~~~~~----~-~~~~~~~----~~~~~~~g~l~~~dp~~~~~-~~~~~~~~~pngi~~~~dg~~l~v~~~~-- 210 (355)
+ |+++.....- . .....+. -+.......++.+|..+++. +.+.. . ....++++||| .++.+...
T Consensus 116 ~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~ 192 (347)
T 2gop_A 116 RKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREI 192 (347)
T ss_dssp SEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECCCS
T ss_pred CEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecccc
Confidence 4 6665321000 0 0000000 00001134699999988887 55544 2 56678999999 66666432
Q ss_pred ------CCeEEEEE
Q 018474 211 ------KFRCRRYW 218 (355)
Q Consensus 211 ------~~~i~~~~ 218 (355)
...|+.++
T Consensus 193 ~~~~~~~~~l~~~d 206 (347)
T 2gop_A 193 IPQYFKFWDIYIWE 206 (347)
T ss_dssp SCCSSCCEEEEEEE
T ss_pred cccccccccEEEeC
Confidence 23677776
No 292
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.67 E-value=0.051 Score=53.17 Aligned_cols=162 Identities=10% Similarity=-0.052 Sum_probs=85.2
Q ss_pred eEEEeeCCCe----EEEEecCCEEEEEEcCCCeeEEeeccCC-----CcccCeEECCCCCEEEEeC------CCcEEEEc
Q 018474 56 DVSVVVSKGA----LYTATRDGWVKYFILHNETLVNWKHIDS-----QSLLGLTTTKDGGVILCDN------EKGLLKVT 120 (355)
Q Consensus 56 ~i~~d~~~g~----l~~~~~~g~i~~~~~~~g~~~~~~~~~~-----~p~~gl~~d~~g~L~v~~~------~~gl~~~~ 120 (355)
++++.+.++. +|+++.++.|+.+|.++|+..--..... .....-.+ .+|.+|++.. .+.++.+|
T Consensus 110 g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v-~~g~V~vg~~g~e~g~~g~v~A~D 188 (599)
T 1w6s_A 110 GLAYWPGDGKTPALILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYV-VKDKVIIGSSGAELGVRGYLTAYD 188 (599)
T ss_dssp CCEEECCCSSSCCEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE-ETTEEEECCBCGGGTCCCEEEEEE
T ss_pred ceEEEecCCcceeEEEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEE-ECCEEEEEecccccCCCCeEEEEE
Confidence 4566223556 9999999999999999997542211111 11101122 2678888764 34588998
Q ss_pred -CCC-eEE-Ec-CCcC-------------------------------------CcccEEEcc-CCcEEEEeCCC-CCCCc
Q 018474 121 -EEG-VEA-IV-PDAS-------------------------------------FTNDVIAAS-DGTLYFTVAST-KYTPT 157 (355)
Q Consensus 121 -~~g-~~~-~~-~~~~-------------------------------------~~~~l~~d~-dG~ly~~d~~~-~~~~~ 157 (355)
.+| ..- +. .... .-...++|+ .|.+|++.... .+...
T Consensus 189 ~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~ 268 (599)
T 1w6s_A 189 VKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNET 268 (599)
T ss_dssp TTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGG
T ss_pred CCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCc
Confidence 477 321 11 1100 001356775 46899886542 11110
Q ss_pred cccccccccCCCCeEEEEeCCCCeEEEeecccc-------cccc-EEEe---CCCC--EEEEEeCCCCeEEEEEeCC
Q 018474 158 DFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFY-------FANG-IALS---KNED--FVVVCESWKFRCRRYWLKG 221 (355)
Q Consensus 158 ~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~~~-------~png-i~~~---~dg~--~l~v~~~~~~~i~~~~~~~ 221 (355)
.- .-+......++.+|++||+.....+... .++. +.++ .||+ .+++..+..+.++.++.+.
T Consensus 269 ~r---~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~t 342 (599)
T 1w6s_A 269 MR---PGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTD 342 (599)
T ss_dssp GS---CSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTT
T ss_pred cc---CCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCC
Confidence 00 0011123579999999998765432211 1111 2222 4563 3445445566777777643
No 293
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=97.66 E-value=0.01 Score=52.68 Aligned_cols=198 Identities=12% Similarity=0.019 Sum_probs=100.3
Q ss_pred CCCceEEEeeC--CCeEEEEecCCEEEEEEcCCCeeEE---eeccCCCcccCeEECCC--CCEEEEeCCCc-EEEEc-CC
Q 018474 52 NHPEDVSVVVS--KGALYTATRDGWVKYFILHNETLVN---WKHIDSQSLLGLTTTKD--GGVILCDNEKG-LLKVT-EE 122 (355)
Q Consensus 52 ~~p~~i~~d~~--~g~l~~~~~~g~i~~~~~~~g~~~~---~~~~~~~p~~gl~~d~~--g~L~v~~~~~g-l~~~~-~~ 122 (355)
..-.++++.++ +..|..++.|+.|..+|..+++... +......+. ++++.++ |.++++...++ +..++ ..
T Consensus 58 ~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~-~v~~~p~~~g~~lasgs~D~~i~lwd~~~ 136 (316)
T 3bg1_A 58 GPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVN-SVCWAPHDYGLILACGSSDGAISLLTYTG 136 (316)
T ss_dssp SCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCC-EEEECCTTTCSCEEEECSSSCEEEEEECS
T ss_pred ccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceE-EEEECCCCCCcEEEEEcCCCCEEEEecCC
Confidence 34456777532 5678888899999999987764322 221233466 8888876 66555544445 44444 22
Q ss_pred C--eEEEc---CCcCCcccEEEccCC---cEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCC-eEEEe---ecccc
Q 018474 123 G--VEAIV---PDASFTNDVIAASDG---TLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLK-ETTVL---HEGFY 190 (355)
Q Consensus 123 g--~~~~~---~~~~~~~~l~~d~dG---~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~-~~~~~---~~~~~ 190 (355)
+ ..... .....++.+.+++++ .+... .... .......+..+...+.+..||..++ +.+.. .....
T Consensus 137 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~ 213 (316)
T 3bg1_A 137 EGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDH-PSGQ--KPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSD 213 (316)
T ss_dssp SSCEEECCBTTSSSSCBCCCEECCCCCC-------CCSC--CCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSS
T ss_pred CCCcceeeeeccccCCcceEEEccccCCcccccc-cccc--CccccceEEEecCCCeEEEEEeCCCCccceeeecccCCC
Confidence 2 22211 111456677777763 11100 0000 0000011222333455666665433 22222 11122
Q ss_pred ccccEEEeCCC----CEEEEEeCCCCeEEEEEeCCCCCc--ceeEecccCCCCcCceEECCCCCEEEEeec
Q 018474 191 FANGIALSKNE----DFVVVCESWKFRCRRYWLKGDRAG--ILDAFIENLPGGPDNINLAPDGSFWIGLIK 255 (355)
Q Consensus 191 ~pngi~~~~dg----~~l~v~~~~~~~i~~~~~~~~~~~--~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~ 255 (355)
..+.++++|++ + ++++....+.|..++++..... ..+.+ ....+....+.+.++|++.++...
T Consensus 214 ~V~~v~~sp~~~~~~~-~las~s~D~~v~iw~~~~~~~~~~~~~~~-~~~~~~v~~v~~sp~g~~las~~~ 282 (316)
T 3bg1_A 214 WVRDVAWAPSIGLPTS-TIASCSQDGRVFIWTCDDASSNTWSPKLL-HKFNDVVWHVSWSITANILAVSGG 282 (316)
T ss_dssp CEEEEECCCCSSCSCC-EEEEEETTCEEEEEECSSTTCCCCBCCEE-EECSSCEEEEEECTTTCCEEEEES
T ss_pred ceEEEEecCCCCCCCc-eEEEEcCCCeEEEEEccCccccchhhhhh-hcCCCcEEEEEEcCCCCEEEEEcC
Confidence 34678999986 4 5566666788888887542111 11112 122233445778888887665544
No 294
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.65 E-value=0.027 Score=50.57 Aligned_cols=226 Identities=6% Similarity=-0.029 Sum_probs=119.8
Q ss_pred ceEEEeeCCCeEEEEecCCEEEEEEcCCCeeEEeecc---CCCcccCeEECCCCCEEEEeCCCcEEEEcCCC--eEEEcC
Q 018474 55 EDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHI---DSQSLLGLTTTKDGGVILCDNEKGLLKVTEEG--VEAIVP 129 (355)
Q Consensus 55 ~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~~~~---~~~p~~gl~~d~~g~L~v~~~~~gl~~~~~~g--~~~~~~ 129 (355)
.+|+++ . +.+|+....|.|++-.-....++..... .+.+. .++...++++|++...+++++-...| .+.+..
T Consensus 83 ~~i~~~-~-~~~~~~g~~g~i~~S~DgG~tW~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~g~v~~S~DgG~tW~~~~~ 159 (327)
T 2xbg_A 83 NSVSFQ-G-NEGWIVGEPPIMLHTTDGGQSWSQIPLDPKLPGSPR-LIKALGNGSAEMITNVGAIYRTKDSGKNWQALVQ 159 (327)
T ss_dssp EEEEEE-T-TEEEEEEETTEEEEESSTTSSCEECCCCTTCSSCEE-EEEEEETTEEEEEETTCCEEEESSTTSSEEEEEC
T ss_pred EEEEec-C-CeEEEEECCCeEEEECCCCCCceECccccCCCCCeE-EEEEECCCCEEEEeCCccEEEEcCCCCCCEEeec
Confidence 467776 3 6788777778777643212245554321 13456 67776778899887655677665444 444433
Q ss_pred C-cCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCC-CCeEEEeecc-ccccccEEEeCCCCEEEE
Q 018474 130 D-ASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPK-LKETTVLHEG-FYFANGIALSKNEDFVVV 206 (355)
Q Consensus 130 ~-~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~-~~~~~~~~~~-~~~pngi~~~~dg~~l~v 206 (355)
. ...+.+++++++|++|+... .|.+++-+.. ...++.+... ......++++++++ +|+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~g~------------------~G~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~~~g~-~~~ 220 (327)
T 2xbg_A 160 EAIGVMRNLNRSPSGEYVAVSS------------------RGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGR-LWM 220 (327)
T ss_dssp SCCCCEEEEEECTTSCEEEEET------------------TSSEEEEECTTCSSCEEEECCSSSCEEEEEECTTSC-EEE
T ss_pred CCCcceEEEEEcCCCcEEEEEC------------------CCcEEEEeCCCCCceeECCCCCCCccceeEECCCCC-EEE
Confidence 2 24567788888888887542 2356655322 2344443221 12234677888887 666
Q ss_pred EeCCCCeEEEEEeCCCCCcceeEeccc-CCC-C-cCceEECCCCCEEEEeecCCchhhHhhhcchhHHHHHHhccchhhc
Q 018474 207 CESWKFRCRRYWLKGDRAGILDAFIEN-LPG-G-PDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISL 283 (355)
Q Consensus 207 ~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~g-~-p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (355)
... .+.+++.+.++.. +.+..... ++. . ...+..++++.+|++...
T Consensus 221 ~~~-~G~~~~s~~D~G~--tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~---------------------------- 269 (327)
T 2xbg_A 221 IVN-GGKIAFSDPDNSE--NWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGA---------------------------- 269 (327)
T ss_dssp EET-TTEEEEEETTEEE--EECCCBCTTSSCCSCEEEEEESSSSCEEEEEST----------------------------
T ss_pred EeC-CceEEEecCCCCC--eeEeccCCcccCCcceEEEEecCCCEEEEEeCC----------------------------
Confidence 543 3455554323211 11111101 111 0 123456777889998654
Q ss_pred ccCCCCCCceEEEEEeCCCCeEEEEEECCCCCcccceeEEE-EeCCEEEEeecCCCeEEEeeC
Q 018474 284 LLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAA-EFDGNLYLASLQSNFIGILPL 345 (355)
Q Consensus 284 ~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~-~~~g~L~v~~~~~~~i~~~~~ 345 (355)
+.+++ +...|+.........+. ...+..+. ..++++|+.+. ...|.++.-
T Consensus 270 ---------g~i~~-S~DgG~tW~~~~~~~~~-~~~~~~v~~~~~~~~~~~G~-~G~i~~~~~ 320 (327)
T 2xbg_A 270 ---------GALLC-SQDGGQTWQQDVDVKKV-PSNFYKILFFSPDQGFILGQ-KGILLRYVT 320 (327)
T ss_dssp ---------TCEEE-ESSTTSSCEECGGGTTS-SSCCCEEEEEETTEEEEECS-TTEEEEECC
T ss_pred ---------CeEEE-eCCCCcccEEcCccCCC-CCCeEEEEEECCCceEEEcC-CceEEEEcC
Confidence 23543 33256655555432211 11233343 35788888876 457777764
No 295
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.62 E-value=0.024 Score=51.27 Aligned_cols=171 Identities=11% Similarity=0.145 Sum_probs=93.3
Q ss_pred CCeEEEEe-cCCEEEEEEcCCCeeEEeeccCCCcccCeEECC----CC----CEEEEeCC--C-c--EEEEcC-CC-eEE
Q 018474 63 KGALYTAT-RDGWVKYFILHNETLVNWKHIDSQSLLGLTTTK----DG----GVILCDNE--K-G--LLKVTE-EG-VEA 126 (355)
Q Consensus 63 ~g~l~~~~-~~g~i~~~~~~~g~~~~~~~~~~~p~~gl~~d~----~g----~L~v~~~~--~-g--l~~~~~-~g-~~~ 126 (355)
...+++++ ..++|+.+|. +|+....... ++++ ++.+-+ .| .+++++.. . . +|.+++ ++ ++.
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~-g~~n-nVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~ 115 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT-GKLN-NVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQS 115 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECC-SCEE-EEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEE
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccC-CCcc-cEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceee
Confidence 33456654 4678999999 7776655433 4454 443321 12 23555543 2 2 455564 55 666
Q ss_pred EcC-------CcCCcccEEE--ccC-Cc--EEEEeCCCCCCCccccccccccCCCCeEEEEeC---CCCeE--EEe--ec
Q 018474 127 IVP-------DASFTNDVIA--ASD-GT--LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDP---KLKET--TVL--HE 187 (355)
Q Consensus 127 ~~~-------~~~~~~~l~~--d~d-G~--ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp---~~~~~--~~~--~~ 187 (355)
+.. ....|.++|. +++ |. +|+++. .|.+..|.. ..++. +.+ ..
T Consensus 116 i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k------------------~G~~~q~~l~~~~~g~~~~~lVR~f~ 177 (355)
T 3amr_A 116 MTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGK------------------EGEFEQYELKADKNGYISGKKVRAFK 177 (355)
T ss_dssp CSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECS------------------SSEEEEEEEEECTTSCEEEEEEEEEE
T ss_pred ccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECC------------------CCeEEEEEEEeCCCCcccceEEEEec
Confidence 632 1267899998 774 55 445432 234433321 22222 111 22
Q ss_pred cccccccEEEeCCCCEEEEEeCCCCeEEEEEeCCCCCcceeEe--cc--cCCCCcCceEE--CCCCC-EEEEeec
Q 018474 188 GFYFANGIALSKNEDFVVVCESWKFRCRRYWLKGDRAGILDAF--IE--NLPGGPDNINL--APDGS-FWIGLIK 255 (355)
Q Consensus 188 ~~~~pngi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~--~~--~~~g~p~~i~~--d~~G~-lwv~~~~ 255 (355)
....|.|++++++...||+++.. .+||+|+.+.....+.+.+ .. .+..-+.||++ .++|+ +++++.+
T Consensus 178 lgsq~EgcvvDd~~g~Lyv~eEd-~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQ 251 (355)
T 3amr_A 178 MNSQTEGMAADDEYGRLYIAEED-EAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQ 251 (355)
T ss_dssp CSSCEEEEEEETTTTEEEEEETT-TEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEG
T ss_pred CCCCcceEEEcCCCCeEEEeccc-ceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcC
Confidence 23568899999988899999987 5799999643221111111 11 12123567776 45555 5555555
No 296
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=97.59 E-value=0.0071 Score=60.28 Aligned_cols=184 Identities=9% Similarity=-0.018 Sum_probs=98.5
Q ss_pred CceEEEeeCCCeEEEE-ecC----CEEEEEEcCCCeeEEeeccCC-CcccCeEECCCCC-EEEEeCCCc-----------
Q 018474 54 PEDVSVVVSKGALYTA-TRD----GWVKYFILHNETLVNWKHIDS-QSLLGLTTTKDGG-VILCDNEKG----------- 115 (355)
Q Consensus 54 p~~i~~d~~~g~l~~~-~~~----g~i~~~~~~~g~~~~~~~~~~-~p~~gl~~d~~g~-L~v~~~~~g----------- 115 (355)
-.++.+.|++..|..+ ..+ ..|+.+|..+|+......... ... ++++.+||+ |+.+.....
T Consensus 123 ~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~-~~~wspDg~~l~~~~~d~~~~~~~~~~~~~ 201 (695)
T 2bkl_A 123 LGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKYA-TPKWTPDSKGFYYEWLPTDPSIKVDERPGY 201 (695)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTTC-CCEECTTSSEEEEEECCCCTTSCGGGGGGG
T ss_pred EEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCccccc-ceEEecCCCEEEEEEecCCCCCccccCCCC
Confidence 3456777666655433 323 479999998887541111111 125 789999997 444443222
Q ss_pred --EEEEcC-CC-e--EEEcCCc---CCcccEEEccCCc-EEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEe
Q 018474 116 --LLKVTE-EG-V--EAIVPDA---SFTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVL 185 (355)
Q Consensus 116 --l~~~~~-~g-~--~~~~~~~---~~~~~l~~d~dG~-ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~ 185 (355)
+++++. ++ . +.+.... ....++.+++||+ |.++.... .....++.++..+++.+.+
T Consensus 202 ~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~--------------~~~~~l~~~~~~~~~~~~l 267 (695)
T 2bkl_A 202 TTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRG--------------WSENDVYWKRPGEKDFRLL 267 (695)
T ss_dssp CEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEET--------------TTEEEEEEECTTCSSCEEE
T ss_pred CEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCC--------------CCceEEEEEcCCCCceEEe
Confidence 777773 44 1 2332221 3566788999994 55543220 0123677777766666655
Q ss_pred eccccccccEEEeCCCCEEEEEeC---CCCeEEEEEeCCCCCcceeEecccCC-CCcCceEECCCCCEEEEeec
Q 018474 186 HEGFYFANGIALSKNEDFVVVCES---WKFRCRRYWLKGDRAGILDAFIENLP-GGPDNINLAPDGSFWIGLIK 255 (355)
Q Consensus 186 ~~~~~~pngi~~~~dg~~l~v~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~-g~p~~i~~d~~G~lwv~~~~ 255 (355)
........... .+||+ +|+... ...+|+++++++......+.+....+ ....++.++ ++.++++...
T Consensus 268 ~~~~~~~~~~~-~~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~ 338 (695)
T 2bkl_A 268 VKGVGAKYEVH-AWKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLK 338 (695)
T ss_dssp EECSSCCEEEE-EETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEE
T ss_pred ecCCCceEEEE-ecCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEE
Confidence 54332222333 36777 777654 25789999886543222233332221 112345555 4556665543
No 297
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.46 E-value=0.056 Score=48.45 Aligned_cols=179 Identities=13% Similarity=0.111 Sum_probs=97.1
Q ss_pred CCCceEEEeeCCCeEEEEecCCEEEEEEcCCCeeEEeecc----CCCcccCeEECCCCCEEEEeCCCcEEEEcCCC--eE
Q 018474 52 NHPEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHI----DSQSLLGLTTTKDGGVILCDNEKGLLKVTEEG--VE 125 (355)
Q Consensus 52 ~~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~~~~----~~~p~~gl~~d~~g~L~v~~~~~gl~~~~~~g--~~ 125 (355)
....+|.+. +.+.+|+....|.|++-.-....++..... ..... ++++++ +++|++...+++++-...| -+
T Consensus 36 ~~~~~v~~~-~~~~~~~~G~~g~i~~s~DgG~tW~~~~~~~~~~~~~~~-~i~~~~-~~~~~~g~~g~i~~S~DgG~tW~ 112 (327)
T 2xbg_A 36 ATILDMSFI-DRHHGWLVGVNATLMETRDGGQTWEPRTLVLDHSDYRFN-SVSFQG-NEGWIVGEPPIMLHTTDGGQSWS 112 (327)
T ss_dssp SCEEEEEES-SSSCEEEEETTTEEEEESSTTSSCEECCCCCSCCCCEEE-EEEEET-TEEEEEEETTEEEEESSTTSSCE
T ss_pred CcEEEEEEC-CCCcEEEEcCCCeEEEeCCCCCCCeECCCCCCCCCccEE-EEEecC-CeEEEEECCCeEEEECCCCCCce
Confidence 345667776 566677766678776653212245554321 11345 778875 7888876444566543444 44
Q ss_pred EEcCC---cCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeeccc-cccccEEEeCCC
Q 018474 126 AIVPD---ASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGF-YFANGIALSKNE 201 (355)
Q Consensus 126 ~~~~~---~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~~-~~pngi~~~~dg 201 (355)
.+... ...+.++++.+++++|+... .+.+++-.-....++...... ....++++++++
T Consensus 113 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~------------------~g~v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~ 174 (327)
T 2xbg_A 113 QIPLDPKLPGSPRLIKALGNGSAEMITN------------------VGAIYRTKDSGKNWQALVQEAIGVMRNLNRSPSG 174 (327)
T ss_dssp ECCCCTTCSSCEEEEEEEETTEEEEEET------------------TCCEEEESSTTSSEEEEECSCCCCEEEEEECTTS
T ss_pred ECccccCCCCCeEEEEEECCCCEEEEeC------------------CccEEEEcCCCCCCEEeecCCCcceEEEEEcCCC
Confidence 43322 13456777777788887642 235666543344566554322 123467788888
Q ss_pred CEEEEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCCEEEEeec
Q 018474 202 DFVVVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIK 255 (355)
Q Consensus 202 ~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~ 255 (355)
+ +|+.. ..+.+++-+-.+... .+......+.....+.++++|++|++...
T Consensus 175 ~-~~~~g-~~G~~~~S~d~gG~t--W~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 224 (327)
T 2xbg_A 175 E-YVAVS-SRGSFYSTWEPGQTA--WEPHNRTTSRRLHNMGFTPDGRLWMIVNG 224 (327)
T ss_dssp C-EEEEE-TTSSEEEEECTTCSS--CEEEECCSSSCEEEEEECTTSCEEEEETT
T ss_pred c-EEEEE-CCCcEEEEeCCCCCc--eeECCCCCCCccceeEECCCCCEEEEeCC
Confidence 7 44443 345676655321221 22221111222345677888999988754
No 298
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.45 E-value=0.0049 Score=51.91 Aligned_cols=135 Identities=12% Similarity=0.003 Sum_probs=80.5
Q ss_pred CcccCeEECCCCCEEEEeCCCcEEEEcC-C-------C-eEEEcCC-cCCcccEEEccCCcEEEEeCCCCCCCccccccc
Q 018474 94 QSLLGLTTTKDGGVILCDNEKGLLKVTE-E-------G-VEAIVPD-ASFTNDVIAASDGTLYFTVASTKYTPTDFYKDM 163 (355)
Q Consensus 94 ~p~~gl~~d~~g~L~v~~~~~gl~~~~~-~-------g-~~~~~~~-~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~ 163 (355)
... .++++++|+||.. ..+.|+++++ + + .+.+... ...-..+.+|++|.||+..
T Consensus 42 ~~~-~laf~P~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav~-------------- 105 (236)
T 1tl2_A 42 NFK-FLFLSPGGELYGV-LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAVS-------------- 105 (236)
T ss_dssp TCS-EEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEEE--------------
T ss_pred cce-eEEECCCccEEEE-eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEeC--------------
Confidence 455 7999999999999 4557999984 5 2 2333321 1345678999999999872
Q ss_pred cccCCCCeEEEEeCCCC-eE------EEeec-cccccccEEEeCCCCEEEEEeCCCCeEEEEEe-CCCC---CcceeEec
Q 018474 164 AEGKPYGQLRKYDPKLK-ET------TVLHE-GFYFANGIALSKNEDFVVVCESWKFRCRRYWL-KGDR---AGILDAFI 231 (355)
Q Consensus 164 ~~~~~~g~l~~~dp~~~-~~------~~~~~-~~~~pngi~~~~dg~~l~v~~~~~~~i~~~~~-~~~~---~~~~~~~~ 231 (355)
.|.|||.+|-+. .- +.+.+ +-..-.-|.++|+|. ||... .+++++-.. .+.. ......+.
T Consensus 106 -----dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~-Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g 177 (236)
T 1tl2_A 106 -----KDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGY-LYAVH--GQQFYKALPPVSNQDNWLARATKIG 177 (236)
T ss_dssp -----TTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSC-EEEEE--TTEEEEECCCSSTTCCHHHHCEEEE
T ss_pred -----CCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCce-EEEEe--CCcEEecCCCCCCCcccccccceec
Confidence 468999987332 11 11111 112235688999997 88777 466766332 1111 11111111
Q ss_pred -ccCCCCcCceEECCCCCEEEEe
Q 018474 232 -ENLPGGPDNINLAPDGSFWIGL 253 (355)
Q Consensus 232 -~~~~g~p~~i~~d~~G~lwv~~ 253 (355)
+... .-.-+.++++|+||.+.
T Consensus 178 ~~g~~-~yr~l~f~~~G~l~~v~ 199 (236)
T 1tl2_A 178 QGGWD-TFKFLFFSSVGTLFGVQ 199 (236)
T ss_dssp SSSGG-GEEEEEECTTSCEEEEE
T ss_pred cCCcc-eEEEEEECCCCcEEEEe
Confidence 0000 11225688999999888
No 299
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=97.42 E-value=0.0098 Score=57.33 Aligned_cols=183 Identities=12% Similarity=-0.008 Sum_probs=106.4
Q ss_pred CCceEEEeeC------CCeEEEEecCCEEEEEEcCCCeeE------------EeeccCCCcccCeEECCCCCEEEEeCCC
Q 018474 53 HPEDVSVVVS------KGALYTATRDGWVKYFILHNETLV------------NWKHIDSQSLLGLTTTKDGGVILCDNEK 114 (355)
Q Consensus 53 ~p~~i~~d~~------~g~l~~~~~~g~i~~~~~~~g~~~------------~~~~~~~~p~~gl~~d~~g~L~v~~~~~ 114 (355)
...++++.|. ++.|..++.+|.|..++..+++.. .+........ ++++.+++.|..+...+
T Consensus 209 ~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~-sv~~s~~~~lasgs~Dg 287 (524)
T 2j04_B 209 EVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLIT-TFDFLSPTTVVCGFKNG 287 (524)
T ss_dssp SEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEE-EEEESSSSEEEEEETTS
T ss_pred cEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEE-EEEecCCCeEEEEeCCC
Confidence 3567888754 356777888999999998655311 1111123455 78887766666666444
Q ss_pred cEEEEc-CCC---eEEEcCCcCCcccE--EEccCC-cEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEE-Eee
Q 018474 115 GLLKVT-EEG---VEAIVPDASFTNDV--IAASDG-TLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETT-VLH 186 (355)
Q Consensus 115 gl~~~~-~~g---~~~~~~~~~~~~~l--~~d~dG-~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~-~~~ 186 (355)
.+..++ .++ ...+......++++ +..++| ++.++.+. .+.+..||..+++.. .+.
T Consensus 288 tV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~-----------------D~tvklWD~~~~~~~~~~~ 350 (524)
T 2j04_B 288 FVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAV-----------------DGYFYIFNPKDIATTKTTV 350 (524)
T ss_dssp EEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEET-----------------TSEEEEECGGGHHHHCEEE
T ss_pred EEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEecc-----------------CCeEEEEECCCCCcccccc
Confidence 455555 333 33343333568888 456777 77776543 567778887554321 111
Q ss_pred ccc--cccccEEEeCCCCEEEEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCCEEEEeecCC
Q 018474 187 EGF--YFANGIALSKNEDFVVVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIKMN 257 (355)
Q Consensus 187 ~~~--~~pngi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~~ 257 (355)
... .....++++|+++. +++....+.|..+++..... ...+. ...+....+++.++|++.++....+
T Consensus 351 ~~~~~~~v~~v~fsp~~~~-l~s~~~d~tv~lwd~~~~~~--~~~l~-gH~~~V~sva~Sp~g~~l~Sgs~Dg 419 (524)
T 2j04_B 351 SRFRGSNLVPVVYCPQIYS-YIYSDGASSLRAVPSRAAFA--VHPLV-SRETTITAIGVSRLHPMVLAGSADG 419 (524)
T ss_dssp EECSCCSCCCEEEETTTTE-EEEECSSSEEEEEETTCTTC--CEEEE-ECSSCEEEEECCSSCCBCEEEETTT
T ss_pred cccccCcccceEeCCCcCe-EEEeCCCCcEEEEECccccc--ceeee-cCCCceEEEEeCCCCCeEEEEECCC
Confidence 111 12357999999985 55555667788888754221 12232 2333345677888887666554433
No 300
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=97.42 E-value=0.00069 Score=65.90 Aligned_cols=71 Identities=17% Similarity=0.151 Sum_probs=50.7
Q ss_pred CCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeeccc--cccccEEEeCCCCEEEEE
Q 018474 132 SFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGF--YFANGIALSKNEDFVVVC 207 (355)
Q Consensus 132 ~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~~--~~pngi~~~~dg~~l~v~ 207 (355)
..|..|++|++|+||++.....-... .+.......++.++|.+++++.+.... ....|++++||++.||+.
T Consensus 476 ~~PDNL~fd~~G~LwI~eDg~~~~~~-----~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 476 NSPDGLGFDKAGRLWILTDGDSSNAG-----DFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSG-----GGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred cCCcceEECCCCCEEEEecCCCcccc-----cccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 67899999999999998654211111 111223457889999999988876543 345689999999988875
No 301
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=97.33 E-value=0.0076 Score=62.12 Aligned_cols=148 Identities=7% Similarity=-0.068 Sum_probs=94.1
Q ss_pred CCceEEEeeCCCeEEEEecCCEEEEEEcCCCeeEEeeccCCCcccCeEECCCCCE-EEEeCCCcEEEEc-CCC-eEEEc-
Q 018474 53 HPEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGGV-ILCDNEKGLLKVT-EEG-VEAIV- 128 (355)
Q Consensus 53 ~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~~~~~~~p~~gl~~d~~g~L-~v~~~~~gl~~~~-~~g-~~~~~- 128 (355)
.-.++++.+ +..|..++.++.|..+|..+++..........+. .++++++|+. +++...+.+..++ .++ ...+.
T Consensus 60 ~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~~~~~V~-~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i 137 (902)
T 2oaj_A 60 AIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVFVPGKIT-SIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKL 137 (902)
T ss_dssp CEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEEEECSSCEE-EEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEE
T ss_pred CEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEEcCCCCEE-EEEECCCCCEEEEEcCCCcEEEEECCCCcccccee
Confidence 346888885 6668888899999999998776443222334567 8899999875 4555444455666 344 32211
Q ss_pred -----------CCcCCcccEEEccCC-cEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeeccc-------
Q 018474 129 -----------PDASFTNDVIAASDG-TLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGF------- 189 (355)
Q Consensus 129 -----------~~~~~~~~l~~d~dG-~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~~------- 189 (355)
.....+.+++++|++ .+.++... .+.+ .||.++++........
T Consensus 138 ~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~-----------------dg~v-lWd~~~~~~~~~~~~~~~~g~~~ 199 (902)
T 2oaj_A 138 DNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYE-----------------YVTL-TYSLVENEIKQSFIYELPPFAPG 199 (902)
T ss_dssp CCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECS-----------------SCEE-EEETTTTEEEEEECCCBCTTCCC
T ss_pred ccccccccccccCCCCeEEEEEccCCCCEEEEEeC-----------------CCcE-EEECCCCceEEEEecccCCcCCC
Confidence 112568889999864 44444322 4567 8888777643322211
Q ss_pred ------------cccccEEEeCCCCEEEEEeCCCCeEEEEEeCC
Q 018474 190 ------------YFANGIALSKNEDFVVVCESWKFRCRRYWLKG 221 (355)
Q Consensus 190 ------------~~pngi~~~~dg~~l~v~~~~~~~i~~~~~~~ 221 (355)
...+.++++|||+.+ ++....+.|..|+++.
T Consensus 200 ~~~~~~~~~~h~~~V~~v~fspdg~~l-asgs~Dg~i~lWd~~~ 242 (902)
T 2oaj_A 200 GDFSEKTNEKRTPKVIQSLYHPNSLHI-ITIHEDNSLVFWDANS 242 (902)
T ss_dssp STTCCCTTSCBCCCEEEEEECTTSSEE-EEEETTCCEEEEETTT
T ss_pred cccccccccccCCCeEEEEEcCCCCEE-EEEECCCeEEEEECCC
Confidence 235678999999855 4445567888888754
No 302
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=97.30 E-value=0.1 Score=51.91 Aligned_cols=161 Identities=7% Similarity=-0.014 Sum_probs=86.4
Q ss_pred CceEEEeeCCCeEE-EEecC----CEEEEEEcCCCeeEEeeccCCCcccCeEECCCCC-EEEEeCCC-------------
Q 018474 54 PEDVSVVVSKGALY-TATRD----GWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGG-VILCDNEK------------- 114 (355)
Q Consensus 54 p~~i~~d~~~g~l~-~~~~~----g~i~~~~~~~g~~~~~~~~~~~p~~gl~~d~~g~-L~v~~~~~------------- 114 (355)
-.++.+.|++..+. ..+.. ..|+.+|..+|+............ ++++. ||+ |+++....
T Consensus 131 l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~-~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~ 208 (693)
T 3iuj_A 131 LDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFS-GISWL-GNEGFFYSSYDKPDGSELSARTDQH 208 (693)
T ss_dssp EEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESC-CCEEE-TTTEEEEEESSCCC-------CCCC
T ss_pred EEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceec-cEEEe-CCCEEEEEEecCcccccccccCCCc
Confidence 34557775555444 33333 357888988887554321111123 67777 665 66665432
Q ss_pred cEEEEc-CCC---eEEEcCCc----CCcccEEEccCCc-EEEEeCCCCCCCccccccccccCCCCeEEEEeCCCC--eEE
Q 018474 115 GLLKVT-EEG---VEAIVPDA----SFTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLK--ETT 183 (355)
Q Consensus 115 gl~~~~-~~g---~~~~~~~~----~~~~~l~~d~dG~-ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~--~~~ 183 (355)
.+++.+ .++ -+.+.... .+..++.+++||+ |+++.... .....++.+|.+++ +++
T Consensus 209 ~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~--------------~~~~~i~~~d~~~~~~~~~ 274 (693)
T 3iuj_A 209 KVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANS--------------TSGNRLYVKDLSQENAPLL 274 (693)
T ss_dssp EEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESS--------------SSCCEEEEEETTSTTCCCE
T ss_pred EEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccC--------------CCCcEEEEEECCCCCCceE
Confidence 266665 232 22332221 2345678899995 55553321 11246888886555 455
Q ss_pred EeeccccccccEEEeCCCCEEEEEeCC---CCeEEEEEeCCCCCcceeEec
Q 018474 184 VLHEGFYFANGIALSKNEDFVVVCESW---KFRCRRYWLKGDRAGILDAFI 231 (355)
Q Consensus 184 ~~~~~~~~pngi~~~~dg~~l~v~~~~---~~~i~~~~~~~~~~~~~~~~~ 231 (355)
.+...... .--.++++|+.+|+.... ..+|+++++++......+.+.
T Consensus 275 ~l~~~~~~-~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~ 324 (693)
T 3iuj_A 275 TVQGDLDA-DVSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLI 324 (693)
T ss_dssp EEECSSSS-CEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEE
T ss_pred EEeCCCCc-eEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEe
Confidence 54433221 111267788877776543 368999998765433344444
No 303
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=97.23 E-value=0.063 Score=53.46 Aligned_cols=186 Identities=11% Similarity=-0.003 Sum_probs=101.0
Q ss_pred EEEEcC-CC-eEEEcCCc-------CCcccEEEccCCc-EEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEe
Q 018474 116 LLKVTE-EG-VEAIVPDA-------SFTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVL 185 (355)
Q Consensus 116 l~~~~~-~g-~~~~~~~~-------~~~~~l~~d~dG~-ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~ 185 (355)
+++.+. .+ .+++.+.. ....++.++|||+ |.++... .+.....|+.+|.++++....
T Consensus 100 l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~-------------~G~~~~~i~v~d~~tg~~~~~ 166 (710)
T 2xdw_A 100 LYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSA-------------SGSDWVTIKFMKVDGAKELPD 166 (710)
T ss_dssp EEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEE-------------TTCSCEEEEEEETTTTEEEEE
T ss_pred EEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcC-------------CCCceEEEEEEECCCCCCCcc
Confidence 567663 44 55443221 2356788999995 4444221 011123689999998886543
Q ss_pred eccccccccEEEeCCCCEEEEEeCCC---------------CeEEEEEeCCCCCcceeEeccc-CCCCcCceEECCCCCE
Q 018474 186 HEGFYFANGIALSKNEDFVVVCESWK---------------FRCRRYWLKGDRAGILDAFIEN-LPGGPDNINLAPDGSF 249 (355)
Q Consensus 186 ~~~~~~pngi~~~~dg~~l~v~~~~~---------------~~i~~~~~~~~~~~~~~~~~~~-~~g~p~~i~~d~~G~l 249 (355)
........+++++|||+.++++.... ..|+++++.+........+... .+....++.+++||+.
T Consensus 167 ~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~ 246 (710)
T 2xdw_A 167 VLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRY 246 (710)
T ss_dssp EEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCE
T ss_pred cccCcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCE
Confidence 22112245799999999888876432 2488888754322112222211 1222346778999974
Q ss_pred EEEeecCCchhhHhhhcchhHHHHHHhccchhhcccCCCCCCceEEEEEeCCC------Ce-EEEEEECCCCCcccceeE
Q 018474 250 WIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGND------GK-IIRDFNDPDATYISFVTS 322 (355)
Q Consensus 250 wv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~------g~-~~~~~~~~~g~~~~~~~~ 322 (355)
.+...... ......|+.+|.++ ++ ....+..+... ....
T Consensus 247 l~~~~~~~-------------------------------~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~---~~~~ 292 (710)
T 2xdw_A 247 VLLSIREG-------------------------------CDPVNRLWYCDLQQESNGITGILKWVKLIDNFEG---EYDY 292 (710)
T ss_dssp EEEEEECS-------------------------------SSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSS---CEEE
T ss_pred EEEEEEcc-------------------------------CCCccEEEEEECcccccccCCccceEEeeCCCCc---EEEE
Confidence 44332210 01124577777623 32 24455443332 1223
Q ss_pred EEEeCCEEEEeecCC---CeEEEeeCCCC
Q 018474 323 AAEFDGNLYLASLQS---NFIGILPLDGP 348 (355)
Q Consensus 323 ~~~~~g~L~v~~~~~---~~i~~~~~~~~ 348 (355)
+..++++||+.+... ..|.++++.+.
T Consensus 293 ~s~dg~~l~~~s~~~~~~~~l~~~d~~~~ 321 (710)
T 2xdw_A 293 VTNEGTVFTFKTNRHSPNYRLINIDFTDP 321 (710)
T ss_dssp EEEETTEEEEEECTTCTTCEEEEEETTSC
T ss_pred EeccCCEEEEEECCCCCCCEEEEEeCCCC
Confidence 445678888876533 36888887654
No 304
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.23 E-value=0.14 Score=49.81 Aligned_cols=108 Identities=14% Similarity=0.111 Sum_probs=63.1
Q ss_pred CCeEEEEecCCEEEEEEcCCCeeEEeeccCCC----------cccCeEECCCCCEEEEeCCCcEEEEc-CCC-eEE---E
Q 018474 63 KGALYTATRDGWVKYFILHNETLVNWKHIDSQ----------SLLGLTTTKDGGVILCDNEKGLLKVT-EEG-VEA---I 127 (355)
Q Consensus 63 ~g~l~~~~~~g~i~~~~~~~g~~~~~~~~~~~----------p~~gl~~d~~g~L~v~~~~~gl~~~~-~~g-~~~---~ 127 (355)
++.+|+++..++|+.+|.++|+..--...... .. +++++ ++++|+++..+.|+.+| ++| ..- +
T Consensus 68 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~-g~a~~-~~~v~~~t~dg~l~AlD~~TG~~~W~~~~ 145 (582)
T 1flg_A 68 DGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNR-GAAIY-GDKVFFGTLDASVVALNKNTGKVVWKKKF 145 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCC-CCEEE-TTEEEEEETTTEEEEEESSSCCEEEEEEC
T ss_pred CCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCC-ccEEE-CCEEEEEeCCCEEEEEECCCCCEEeeecC
Confidence 78899998866699999999975311111111 13 55664 78999998777899999 478 321 1
Q ss_pred cCCc---CCcccEEEcc---CC--cEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEE
Q 018474 128 VPDA---SFTNDVIAAS---DG--TLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTV 184 (355)
Q Consensus 128 ~~~~---~~~~~l~~d~---dG--~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~ 184 (355)
.... .....-++.. +| .+|+..... +....+.++.+|+++|+...
T Consensus 146 ~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~------------e~~~~g~v~alD~~tG~~~W 198 (582)
T 1flg_A 146 ADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGD------------EFGVVGRLFARDPDTGEEIW 198 (582)
T ss_dssp SCGGGTCBCCSCCEEEECTTTCCEEEEECCBCG------------GGCCBCEEEEECTTTCCEEE
T ss_pred CCCCcCcccccCCEEeCCCcCCcEEEEEecccc------------ccCCCCEEEEEECCCCCEEe
Confidence 1110 0111112221 23 577654321 01125689999998887654
No 305
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=97.22 E-value=0.012 Score=56.86 Aligned_cols=134 Identities=11% Similarity=0.087 Sum_probs=90.7
Q ss_pred CCceEEEeeCCCeEEEEecCCEEEEEEcCCCee--------EEeec----cCCCcccCeEECCCCCEEEEeCCCcEEEEc
Q 018474 53 HPEDVSVVVSKGALYTATRDGWVKYFILHNETL--------VNWKH----IDSQSLLGLTTTKDGGVILCDNEKGLLKVT 120 (355)
Q Consensus 53 ~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~--------~~~~~----~~~~p~~gl~~d~~g~L~v~~~~~gl~~~~ 120 (355)
.-.++++.|++..|++++.+|.|..++..++.. ..+.. ...... ++++.++| +..+...+.+..++
T Consensus 131 sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~-sVawSPdg-Laass~D~tVrlWd 208 (588)
T 2j04_A 131 TYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVT-HIVWYEDV-LVAALSNNSVFSMT 208 (588)
T ss_dssp CEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEE-EEEEETTE-EEEEETTCCEEEEC
T ss_pred cEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEE-EEEEcCCc-EEEEeCCCeEEEEE
Confidence 356899999899999999999999999977742 22211 113567 88999999 76666656677777
Q ss_pred C-CC-e----EEEc-CCcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEee-cccccc
Q 018474 121 E-EG-V----EAIV-PDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH-EGFYFA 192 (355)
Q Consensus 121 ~-~g-~----~~~~-~~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~-~~~~~p 192 (355)
. ++ . +.+. .....+.++++. |+..++.. .+.+..||..+++...+. .....-
T Consensus 209 ~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~------------------~~tIkLWd~~~~~~~~~~~gh~~~V 268 (588)
T 2j04_A 209 VSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC------------------PGYVHKIDLKNYSISSLKTGSLENF 268 (588)
T ss_dssp CCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC------------------SSEEEEEETTTTEEEEEECSCCSCC
T ss_pred CCCCccccceeeecccccCcEEEEEEE--CCEEEEEe------------------CCeEEEEECCCCeEEEEEcCCCceE
Confidence 4 33 2 2342 222578888887 44444321 357999999888875554 333445
Q ss_pred ccEEE--eCCCCEEEEEe
Q 018474 193 NGIAL--SKNEDFVVVCE 208 (355)
Q Consensus 193 ngi~~--~~dg~~l~v~~ 208 (355)
.++++ +||+..+.++.
T Consensus 269 ~~va~~~s~d~~~La~a~ 286 (588)
T 2j04_A 269 HIIPLNHEKESTILLMSN 286 (588)
T ss_dssp CEEEETTCSSCEEEEECS
T ss_pred EEEEeeeCCCCCEEEEEc
Confidence 78999 99997655554
No 306
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=97.18 E-value=0.044 Score=51.28 Aligned_cols=148 Identities=9% Similarity=0.021 Sum_probs=88.9
Q ss_pred CCceEEEeeCCCeEEEEecCCEEEEEEcCC-----------CeeEEe-----eccCCCcccCeEECCCCCEEE----EeC
Q 018474 53 HPEDVSVVVSKGALYTATRDGWVKYFILHN-----------ETLVNW-----KHIDSQSLLGLTTTKDGGVIL----CDN 112 (355)
Q Consensus 53 ~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~-----------g~~~~~-----~~~~~~p~~gl~~d~~g~L~v----~~~ 112 (355)
.-..+++.+.++.++++..++ +..++..+ ...... ......+. +++++++|++.+ +..
T Consensus 38 ~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~l~~spdg~~lav~~~sgs 115 (434)
T 2oit_A 38 RSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIH-HLALSCDNLTLSACMMSSE 115 (434)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEE-EEEECTTSCEEEEEEEETT
T ss_pred CccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCccc-EEEEcCCCCEEEEEEeccC
Confidence 456788887788888887776 65544310 011111 11123467 899999998665 333
Q ss_pred CCc-EEEEc-CC---------C-eEEEcC---CcCCcccEEEccC-CcEEEEeCCCCCCCccccccccccCCCCeEEEEe
Q 018474 113 EKG-LLKVT-EE---------G-VEAIVP---DASFTNDVIAASD-GTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYD 176 (355)
Q Consensus 113 ~~g-l~~~~-~~---------g-~~~~~~---~~~~~~~l~~d~d-G~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~d 176 (355)
.++ +..++ .+ . +..+.. ....+.++++.|+ ++++++.+. .+.+..||
T Consensus 116 ~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~-----------------Dg~v~iwD 178 (434)
T 2oit_A 116 YGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLA-----------------DGSIAVLQ 178 (434)
T ss_dssp TEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEET-----------------TSCEEEEE
T ss_pred CCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEEC-----------------CCeEEEEE
Confidence 344 33444 11 1 111111 1256888999997 677776433 56788888
Q ss_pred CCCCeEEEeecc-ccccccEEEeCCCCEEEEEeCCCCeEEEEEeC
Q 018474 177 PKLKETTVLHEG-FYFANGIALSKNEDFVVVCESWKFRCRRYWLK 220 (355)
Q Consensus 177 p~~~~~~~~~~~-~~~pngi~~~~dg~~l~v~~~~~~~i~~~~~~ 220 (355)
.++++......+ ......++++|||+.++.+. ..+.|..|+++
T Consensus 179 ~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs-~dg~v~iwd~~ 222 (434)
T 2oit_A 179 VTETVKVCATLPSTVAVTSVCWSPKGKQLAVGK-QNGTVVQYLPT 222 (434)
T ss_dssp ESSSEEEEEEECGGGCEEEEEECTTSSCEEEEE-TTSCEEEECTT
T ss_pred cCCCcceeeccCCCCceeEEEEcCCCCEEEEEc-CCCcEEEEccC
Confidence 876643322212 23467899999999776665 56788888875
No 307
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=97.18 E-value=0.017 Score=52.33 Aligned_cols=133 Identities=15% Similarity=0.097 Sum_probs=78.4
Q ss_pred EecCCEEEEEEcCCCe-----------------eEEeeccCCCcccCeEECCCCCEEEEeCCCc--EEEEc-CCC--eEE
Q 018474 69 ATRDGWVKYFILHNET-----------------LVNWKHIDSQSLLGLTTTKDGGVILCDNEKG--LLKVT-EEG--VEA 126 (355)
Q Consensus 69 ~~~~g~i~~~~~~~g~-----------------~~~~~~~~~~p~~gl~~d~~g~L~v~~~~~g--l~~~~-~~g--~~~ 126 (355)
+..+|.|..+|..+++ ...+......+. ++++.++|++.++...++ +..++ .++ +..
T Consensus 155 g~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~-~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~ 233 (355)
T 3vu4_A 155 EFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIK-MVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVRE 233 (355)
T ss_dssp SSCTTCEEEEECCC------------------CCEEECCCSSCEE-EEEECTTSSEEEEEETTCSEEEEEETTTCCEEEE
T ss_pred CCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceE-EEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEE
Confidence 3567888888886654 233322234567 899999999777665556 44445 456 555
Q ss_pred EcC--CcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeE---EEe----------------
Q 018474 127 IVP--DASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKET---TVL---------------- 185 (355)
Q Consensus 127 ~~~--~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~---~~~---------------- 185 (355)
+.. ....+++++++++|++.++.+. .+.+..||...+.. ..+
T Consensus 234 ~~~g~h~~~v~~~~~s~~~~~l~s~s~-----------------d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (355)
T 3vu4_A 234 FRRGLDRADVVDMKWSTDGSKLAVVSD-----------------KWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLC 296 (355)
T ss_dssp EECTTCCSCEEEEEECTTSCEEEEEET-----------------TCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSE
T ss_pred EEcCCCCCcEEEEEECCCCCEEEEEEC-----------------CCEEEEEEccCCCCcccccccceeecccccccccee
Confidence 542 3367899999999987776443 34455555433211 100
Q ss_pred ----ecc-ccccccEEEeCCCCEEEEEeCCCCeEEEEEeC
Q 018474 186 ----HEG-FYFANGIALSKNEDFVVVCESWKFRCRRYWLK 220 (355)
Q Consensus 186 ----~~~-~~~pngi~~~~dg~~l~v~~~~~~~i~~~~~~ 220 (355)
... ......+++++|++.+++. ...+.+..|++.
T Consensus 297 ~~~~~~~~~~~~~~~a~~~d~~~l~~~-~~dg~~~~~~~~ 335 (355)
T 3vu4_A 297 NFKLSVDKHVRGCKIAWISESSLVVVW-PHTRMIETFKVV 335 (355)
T ss_dssp EEECCCCTTCCCCEEEESSSSEEEEEE-TTTTEEEEEEEE
T ss_pred EEEeccCCCCCceEEEEeCCCCEEEEE-eCCCeEEEEEEE
Confidence 000 0001457899999855554 456778777764
No 308
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.17 E-value=0.034 Score=55.23 Aligned_cols=84 Identities=13% Similarity=0.059 Sum_probs=49.1
Q ss_pred CCeEEEEeCCCCeEEEeeccccccccEEEeCCCCEEEEEeCCCCeEEEEEeCCCC-CcceeEecccCCCCcCceEECCCC
Q 018474 169 YGQLRKYDPKLKETTVLHEGFYFANGIALSKNEDFVVVCESWKFRCRRYWLKGDR-AGILDAFIENLPGGPDNINLAPDG 247 (355)
Q Consensus 169 ~g~l~~~dp~~~~~~~~~~~~~~pngi~~~~dg~~l~v~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~g~p~~i~~d~~G 247 (355)
.|.|+.+|+++++............+..+...+..+|+. +..+.|+.++.+..+ +...+ . .......-+....+|
T Consensus 437 ~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~g-~~dg~l~a~d~~tG~~l~~~~--~-~~~~~~~p~~~~~~G 512 (668)
T 1kv9_A 437 SGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQG-TAAGQMHAYSADKGEALWQFE--A-QSGIVAAPMTFELAG 512 (668)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEE-CTTSEEEEEETTTCCEEEEEE--C-SSCCCSCCEEEEETT
T ss_pred cceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEEE-CCcccchhhhhhcChhheEec--C-CCCcccCceEEEECC
Confidence 378999999999876544332223455555566667776 567899999975332 21211 1 111111223434578
Q ss_pred CEEEEeecC
Q 018474 248 SFWIGLIKM 256 (355)
Q Consensus 248 ~lwv~~~~~ 256 (355)
++||+...+
T Consensus 513 ~~yva~~~G 521 (668)
T 1kv9_A 513 RQYVAIMAG 521 (668)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEEec
Confidence 888887654
No 309
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=97.09 E-value=0.27 Score=49.17 Aligned_cols=157 Identities=7% Similarity=-0.046 Sum_probs=81.7
Q ss_pred eCCCeEEEEec-----CCEEEEEEcC---CCeeEEeeccC-----C--CcccCeEECCCCCEEE--EeCCC----cEEEE
Q 018474 61 VSKGALYTATR-----DGWVKYFILH---NETLVNWKHID-----S--QSLLGLTTTKDGGVIL--CDNEK----GLLKV 119 (355)
Q Consensus 61 ~~~g~l~~~~~-----~g~i~~~~~~---~g~~~~~~~~~-----~--~p~~gl~~d~~g~L~v--~~~~~----gl~~~ 119 (355)
++++.+|.... ...|++.+.. +++.+.+.... + ... ++++.+||+..+ .+..+ .|+.+
T Consensus 116 pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~-~~~~SPDG~~la~~~~~~G~e~~~i~v~ 194 (741)
T 1yr2_A 116 RRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALD-AWAASDDGRLLAYSVQDGGSDWRTVKFV 194 (741)
T ss_dssp EETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEE-EEEECTTSSEEEEEEEETTCSEEEEEEE
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEE-eEEECCCCCEEEEEEcCCCCceEEEEEE
Confidence 35777665433 2467888865 55555542211 1 234 678889997433 33222 26677
Q ss_pred c-CCC-eEEEcCCcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeE--EEeecccc---cc
Q 018474 120 T-EEG-VEAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKET--TVLHEGFY---FA 192 (355)
Q Consensus 120 ~-~~g-~~~~~~~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~--~~~~~~~~---~p 192 (355)
+ .+| ............++++++|..|+++....... . ...........|++++..+++. +.+..... ..
T Consensus 195 dl~tg~~~~~~~~~~~~~~~~wspD~~l~~~~~~~~~~-~---~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~ 270 (741)
T 1yr2_A 195 GVADGKPLADELKWVKFSGLAWLGNDALLYSRFAEPKE-G---QAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRG 270 (741)
T ss_dssp ETTTCCEEEEEEEEEESCCCEESTTSEEEEEECCCC------------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCE
T ss_pred ECCCCCCCCccCCCceeccEEEECCCEEEEEEecCccc-c---cccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEE
Confidence 7 455 33221111123577888885576664321100 0 0000001123588888766541 22222211 23
Q ss_pred ccEEEeCCCCEEEEEeCC----CCeEEEEEeCCC
Q 018474 193 NGIALSKNEDFVVVCESW----KFRCRRYWLKGD 222 (355)
Q Consensus 193 ngi~~~~dg~~l~v~~~~----~~~i~~~~~~~~ 222 (355)
.++.++|||+.++++... ...|+.+++++.
T Consensus 271 ~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~ 304 (741)
T 1yr2_A 271 HGASVSSDGRWVVITSSEGTDPVNTVHVARVTNG 304 (741)
T ss_dssp EEEEECTTSCEEEEEEECTTCSCCEEEEEEEETT
T ss_pred EEEEECCCCCEEEEEEEccCCCcceEEEEECCCC
Confidence 478899999987776532 458999988653
No 310
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.08 E-value=0.045 Score=54.52 Aligned_cols=84 Identities=17% Similarity=0.078 Sum_probs=49.7
Q ss_pred CCeEEEEeCCCCeEEEeeccccccccEEEeCCCCEEEEEeCCCCeEEEEEeCCCC-CcceeEecccCCCCcCceEECCCC
Q 018474 169 YGQLRKYDPKLKETTVLHEGFYFANGIALSKNEDFVVVCESWKFRCRRYWLKGDR-AGILDAFIENLPGGPDNINLAPDG 247 (355)
Q Consensus 169 ~g~l~~~dp~~~~~~~~~~~~~~pngi~~~~dg~~l~v~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~g~p~~i~~d~~G 247 (355)
.|.|..+|++|++...........++-.++..+..+|+. +..+.|+.||.+..+ +.+.+ . .......-+....+|
T Consensus 454 ~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g-t~dg~l~a~D~~tG~~lw~~~--~-~~~~~~~p~ty~~~G 529 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEG-SADGRVIAYAADTGEKLWEQP--A-ASGVMAAPVTYSVDG 529 (689)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEE-CTTSEEEEEETTTCCEEEEEE--C-SSCCCSCCEEEEETT
T ss_pred ceeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEE-CCCCcEEEEECCCCccceeee--C-CCCcccCceEEEECC
Confidence 378999999999876543322222344566666656665 667899999975432 22221 1 111112225555679
Q ss_pred CEEEEeecC
Q 018474 248 SFWIGLIKM 256 (355)
Q Consensus 248 ~lwv~~~~~ 256 (355)
+.||+...+
T Consensus 530 ~qyv~~~~G 538 (689)
T 1yiq_A 530 EQYVTFMAG 538 (689)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEEec
Confidence 999887654
No 311
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=97.07 E-value=0.16 Score=45.76 Aligned_cols=226 Identities=10% Similarity=0.003 Sum_probs=124.0
Q ss_pred CCCceEEEeeCCCeEEEEecCCEEEEEEcCCCeeEEeeccCCCcccCeEECCCCCEE-EEeCCCc-EEEEc-CCC--eEE
Q 018474 52 NHPEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGGVI-LCDNEKG-LLKVT-EEG--VEA 126 (355)
Q Consensus 52 ~~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~~~~~~~p~~gl~~d~~g~L~-v~~~~~g-l~~~~-~~g--~~~ 126 (355)
..-.++++.+++..|.+++.+ ++..++..+++........ ... .+.+..++++. ++....+ +..++ .++ +..
T Consensus 20 ~~V~~v~fs~dg~~la~g~~~-~~~iw~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~ 96 (355)
T 3vu4_A 20 NPVTDYEFNQDQSCLILSTLK-SFEIYNVHPVAHIMSQEMR-HLS-KVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSR 96 (355)
T ss_dssp CCCCEEEECTTSSEEEEECSS-EEEEEEETTEEEEEEEECS-CCC-EEEECTTSSEEEEECSSTTEEEEEETTTTEEEEE
T ss_pred CceEEEEECCCCCEEEEEcCC-EEEEEecCCcceeeeeecC-CeE-EEEEcCCCCEEEEEECCccEEEEEECCCCcEEEE
Confidence 456789999555555555544 5777887665543322211 233 45566555544 4433434 44555 456 443
Q ss_pred EcCCcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCC-eE-EEeecccccccc-EEEeCCCCE
Q 018474 127 IVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLK-ET-TVLHEGFYFANG-IALSKNEDF 203 (355)
Q Consensus 127 ~~~~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~-~~-~~~~~~~~~png-i~~~~dg~~ 203 (355)
+... ..+.++.+++++.+... .+.+..||..++ +. ..+.. +.+ .++++ +.
T Consensus 97 ~~~~-~~v~~v~~~~~~~~~~~--------------------~~~i~i~d~~~~~~~~~~~~~----~~~~~~~s~--~~ 149 (355)
T 3vu4_A 97 IKVD-APVKDLFLSREFIVVSY--------------------GDVISVFKFGNPWKRITDDIR----FGGVCEFSN--GL 149 (355)
T ss_dssp EECS-SCEEEEEECSSEEEEEE--------------------TTEEEEEESSTTCCBSSCCEE----EEEEEEEET--TE
T ss_pred EECC-CceEEEEEcCCEEEEEE--------------------cCEEEEEECCCCceeeEEecc----CCceEEEEc--cE
Confidence 3322 45667777665433222 235777776554 21 11111 333 34555 44
Q ss_pred EEEE-eCCCCeEEEEEeCCCCC-------------cc-eeEecccCCCCcCceEECCCCCEEEEeecCCchhhHhhhcch
Q 018474 204 VVVC-ESWKFRCRRYWLKGDRA-------------GI-LDAFIENLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCR 268 (355)
Q Consensus 204 l~v~-~~~~~~i~~~~~~~~~~-------------~~-~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~ 268 (355)
+.++ ....+.|..|+++.... .. ...+. ...+....+.++++|++.++....
T Consensus 150 la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~-~h~~~v~~~~~s~~g~~l~s~s~d------------ 216 (355)
T 3vu4_A 150 LVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIK-AHTNPIKMVRLNRKSDMVATCSQD------------ 216 (355)
T ss_dssp EEEEESSCTTCEEEEECCC------------------CCEEEC-CCSSCEEEEEECTTSSEEEEEETT------------
T ss_pred EEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEE-ccCCceEEEEECCCCCEEEEEeCC------------
Confidence 5555 56677888888854220 00 12222 223334567889999877776542
Q ss_pred hHHHHHHhccchhhcccCCCCCCceE-EEEEeCCCCeEEEEEEC--CCCCcccceeEEEEeC-CEEEEeecCCCeEEEee
Q 018474 269 EKWELLDAYPGLISLLLPMGSDAGAR-VVKVDGNDGKIIRDFND--PDATYISFVTSAAEFD-GNLYLASLQSNFIGILP 344 (355)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~g~~~~~~~~--~~g~~~~~~~~~~~~~-g~L~v~~~~~~~i~~~~ 344 (355)
+. |..+|..+++.+..+.. .. ..+..+.... +++.+.......|...+
T Consensus 217 ------------------------~~~v~iwd~~~~~~~~~~~~g~h~----~~v~~~~~s~~~~~l~s~s~d~~v~iw~ 268 (355)
T 3vu4_A 217 ------------------------GTIIRVFKTEDGVLVREFRRGLDR----ADVVDMKWSTDGSKLAVVSDKWTLHVFE 268 (355)
T ss_dssp ------------------------CSEEEEEETTTCCEEEEEECTTCC----SCEEEEEECTTSCEEEEEETTCEEEEEE
T ss_pred ------------------------CCEEEEEECCCCcEEEEEEcCCCC----CcEEEEEECCCCCEEEEEECCCEEEEEE
Confidence 33 66678767888888863 23 2466666653 55555555578888888
Q ss_pred CCCC
Q 018474 345 LDGP 348 (355)
Q Consensus 345 ~~~~ 348 (355)
++..
T Consensus 269 ~~~~ 272 (355)
T 3vu4_A 269 IFND 272 (355)
T ss_dssp SSCC
T ss_pred ccCC
Confidence 8654
No 312
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=97.04 E-value=0.14 Score=44.55 Aligned_cols=144 Identities=9% Similarity=0.059 Sum_probs=83.3
Q ss_pred ceEEEeeCCCeEEEEecCCEEEEEEcCCCeeEEeecc---CCCcccCeEECCCCCEEEEeCCCcEEEE-c-CCC--eEEE
Q 018474 55 EDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHI---DSQSLLGLTTTKDGGVILCDNEKGLLKV-T-EEG--VEAI 127 (355)
Q Consensus 55 ~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~~~~---~~~p~~gl~~d~~g~L~v~~~~~gl~~~-~-~~g--~~~~ 127 (355)
..|++. .++.|-++ .++.|+.+|..+|+....... ...+. ++++.++|+.+++...+|.+++ + .++ +..+
T Consensus 29 ~~l~WS-~~~~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~-~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~ 105 (318)
T 4ggc_A 29 NLVDWS-SGNVLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYIS-SVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNM 105 (318)
T ss_dssp BCEEEC-TTSEEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEE-EEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred eEEEEC-CCCEEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEE-EEEECCCCCEEEEEECCCcEEEeecCCceeEEEe
Confidence 568888 56655555 489999999999876654332 23466 8999999987665555564444 5 355 4444
Q ss_pred cCCcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCe--EEEeeccccccccEEEeCCCCEEE
Q 018474 128 VPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKE--TTVLHEGFYFANGIALSKNEDFVV 205 (355)
Q Consensus 128 ~~~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~--~~~~~~~~~~pngi~~~~dg~~l~ 205 (355)
....... ..+..++.+.++.+. .+.+..++..++. ...+.........++++++++.++
T Consensus 106 ~~h~~~~--~~~~~~~~~l~s~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 166 (318)
T 4ggc_A 106 TSHSARV--GSLSWNSYILSSGSR-----------------SGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLA 166 (318)
T ss_dssp ECCSSCE--EEEEEETTEEEEEET-----------------TSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEE
T ss_pred cCccceE--EEeecCCCEEEEEec-----------------CCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEE
Confidence 3322222 233444544444322 3344444443332 222222334456678889998555
Q ss_pred EEeCCCCeEEEEEeCC
Q 018474 206 VCESWKFRCRRYWLKG 221 (355)
Q Consensus 206 v~~~~~~~i~~~~~~~ 221 (355)
. ....+.|..+++..
T Consensus 167 s-~~~d~~i~iwd~~~ 181 (318)
T 4ggc_A 167 S-GGNDNLVNVWPSAP 181 (318)
T ss_dssp E-EETTSCEEEEESSC
T ss_pred E-EecCcceeEEECCC
Confidence 4 44567888888754
No 313
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=96.92 E-value=0.019 Score=53.77 Aligned_cols=151 Identities=13% Similarity=0.084 Sum_probs=86.5
Q ss_pred CCceEEEeeCCCeEEE----EecCCEEEEEEcCCC-----ee----EEeec---cCCCcccCeEECCC-CCEEEEeCCCc
Q 018474 53 HPEDVSVVVSKGALYT----ATRDGWVKYFILHNE-----TL----VNWKH---IDSQSLLGLTTTKD-GGVILCDNEKG 115 (355)
Q Consensus 53 ~p~~i~~d~~~g~l~~----~~~~g~i~~~~~~~g-----~~----~~~~~---~~~~p~~gl~~d~~-g~L~v~~~~~g 115 (355)
...++++.+++..|++ ++.++.|..+|..++ +. ..+.. ....+. ++++.++ ++++++...+|
T Consensus 94 ~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~-~v~~~p~~~~~las~s~Dg 172 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVI-DMKWNPTVPSMVAVCLADG 172 (434)
T ss_dssp CEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEE-EEEECSSCTTEEEEEETTS
T ss_pred cccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceE-EEEECCCCCCEEEEEECCC
Confidence 4788999976666774 445788888887443 11 11111 134567 8999887 67666443444
Q ss_pred -EEEEc-CCC--eEEEcCCcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeeccc--
Q 018474 116 -LLKVT-EEG--VEAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGF-- 189 (355)
Q Consensus 116 -l~~~~-~~g--~~~~~~~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~~-- 189 (355)
+..++ .++ ..........+.+++++++|+..++.+. .+.+..||.+......+....
T Consensus 173 ~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~-----------------dg~v~iwd~~~~~~~~~~~~~~~ 235 (434)
T 2oit_A 173 SIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQ-----------------NGTVVQYLPTLQEKKVIPCPPFY 235 (434)
T ss_dssp CEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEET-----------------TSCEEEECTTCCEEEEECCCTTC
T ss_pred eEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcC-----------------CCcEEEEccCCcccccccCCccc
Confidence 55556 455 2222222257889999999965544322 467888988733333222111
Q ss_pred -----cccccEEEeCCCCEEEEEeCCC------CeEEEEEeCC
Q 018474 190 -----YFANGIALSKNEDFVVVCESWK------FRCRRYWLKG 221 (355)
Q Consensus 190 -----~~pngi~~~~dg~~l~v~~~~~------~~i~~~~~~~ 221 (355)
.....+++++++.++....... ..+..+++..
T Consensus 236 ~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~ 278 (434)
T 2oit_A 236 ESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPK 278 (434)
T ss_dssp CTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCC
T ss_pred CCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEecc
Confidence 1234677888776554444333 2366777753
No 314
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=96.80 E-value=0.19 Score=49.94 Aligned_cols=180 Identities=13% Similarity=0.049 Sum_probs=94.6
Q ss_pred ceEEEeeCCCeEEEEecCCE-------------EEEEEcCCCee--EEeeccC---CCcccCeEECCCCC-EEEEeCCC-
Q 018474 55 EDVSVVVSKGALYTATRDGW-------------VKYFILHNETL--VNWKHID---SQSLLGLTTTKDGG-VILCDNEK- 114 (355)
Q Consensus 55 ~~i~~d~~~g~l~~~~~~g~-------------i~~~~~~~g~~--~~~~~~~---~~p~~gl~~d~~g~-L~v~~~~~- 114 (355)
.++++.+++..|+.+..+.. |++++..+++. ..+.... .... ++.++++|+ |.++...+
T Consensus 171 ~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~-~~~~SpDG~~l~~~~~~~~ 249 (695)
T 2bkl_A 171 ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFL-QSDLSRDGKYLFVYILRGW 249 (695)
T ss_dssp CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEE-EEEECTTSCCEEEEEEETT
T ss_pred cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEE-EEEECCCCCEEEEEEeCCC
Confidence 57889876777777765443 99999876652 2222211 2345 678889986 44443233
Q ss_pred ---cEEEEcC-CC-eEEEcCCcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCe---EEEee
Q 018474 115 ---GLLKVTE-EG-VEAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKE---TTVLH 186 (355)
Q Consensus 115 ---gl~~~~~-~g-~~~~~~~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~---~~~~~ 186 (355)
.++.++. ++ .+.+..........+. ++|.+|+.... ....+.|+++|.++++ ++.+.
T Consensus 250 ~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~-~~g~l~~~s~~--------------~~~~~~l~~~d~~~~~~~~~~~l~ 314 (695)
T 2bkl_A 250 SENDVYWKRPGEKDFRLLVKGVGAKYEVHA-WKDRFYVLTDE--------------GAPRQRVFEVDPAKPARASWKEIV 314 (695)
T ss_dssp TEEEEEEECTTCSSCEEEEECSSCCEEEEE-ETTEEEEEECT--------------TCTTCEEEEEBTTBCSGGGCEEEE
T ss_pred CceEEEEEcCCCCceEEeecCCCceEEEEe-cCCcEEEEECC--------------CCCCCEEEEEeCCCCCccCCeEEe
Confidence 4777763 55 5555443322333333 55557776432 1225689999987665 24343
Q ss_pred cc--ccccccEEEeCCCCEEEEEeCCC--CeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCC-EEEEeec
Q 018474 187 EG--FYFANGIALSKNEDFVVVCESWK--FRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGS-FWIGLIK 255 (355)
Q Consensus 187 ~~--~~~pngi~~~~dg~~l~v~~~~~--~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~-lwv~~~~ 255 (355)
.. .....+++++ ++ .++++.... .+|+.+++++. ..+.+.....+...++..+++|. ++++...
T Consensus 315 ~~~~~~~l~~~~~~-~~-~lv~~~~~dg~~~l~~~~~~g~---~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss 383 (695)
T 2bkl_A 315 PEDSSASLLSVSIV-GG-HLSLEYLKDATSEVRVATLKGK---PVRTVQLPGVGAASNLMGLEDLDDAYYVFTS 383 (695)
T ss_dssp CCCSSCEEEEEEEE-TT-EEEEEEEETTEEEEEEEETTCC---EEEECCCSSSSEECCCBSCTTCSEEEEEEEE
T ss_pred cCCCCCeEEEEEEE-CC-EEEEEEEECCEEEEEEEeCCCC---eeEEecCCCCeEEEEeecCCCCCEEEEEEcC
Confidence 22 1223456777 44 466665433 35666665432 11211101112223455566674 5555443
No 315
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=96.58 E-value=0.028 Score=53.99 Aligned_cols=117 Identities=17% Similarity=0.150 Sum_probs=73.5
Q ss_pred ccccEEEeCCCCEEEEEeCC---------------------CCeEEEEEeCCCC----CcceeEecc-cC----------
Q 018474 191 FANGIALSKNEDFVVVCESW---------------------KFRCRRYWLKGDR----AGILDAFIE-NL---------- 234 (355)
Q Consensus 191 ~pngi~~~~dg~~l~v~~~~---------------------~~~i~~~~~~~~~----~~~~~~~~~-~~---------- 234 (355)
.|.+++++|....+|++-+. .+.|+++..++.. ..+.++++. ..
T Consensus 385 RpEdi~v~p~~g~vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~l~~G~p~~~~~~~~~ 464 (592)
T 4a9v_A 385 RPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGTPKG 464 (592)
T ss_dssp CEEEEEECTTTCCEEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTSGGG
T ss_pred CccceeEcCCCCEEEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEEEEccCCccccccccc
Confidence 47789999865569998664 1679999875421 112343321 00
Q ss_pred ----------CCCcCceEECCCCCEEEEeecCCc--hhhHhhhcchhHHHHHHhccchhhcccCCCCCCceEEEEEeCCC
Q 018474 235 ----------PGGPDNINLAPDGSFWIGLIKMNQ--TGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGND 302 (355)
Q Consensus 235 ----------~g~p~~i~~d~~G~lwv~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 302 (355)
-..||++++|++|+||+++-..-. ... -......+++++|.+
T Consensus 465 g~~~~~~~~~fnsPDnL~fd~~G~LWf~TD~~~~~~g~~--------------------------~~~gnn~v~~~dp~t 518 (592)
T 4a9v_A 465 GSSNITPQNMFNSPDGLGFDKAGRLWILTDGDSSNAGDF--------------------------AGMGNNQMLCADPAT 518 (592)
T ss_dssp CCTTCCTTTCCCCEEEEEECTTCCEEEEECCCCCCSGGG--------------------------TTCCSCEEEEECTTT
T ss_pred CccCccccCccCCCCceEECCCCCEEEEeCCCcCccccc--------------------------cccCCceEEEEeCCC
Confidence 124899999999999996644210 000 012234799999967
Q ss_pred CeEEEEEECCCCCcccceeEEEEe--CCEEEEeecC
Q 018474 303 GKIIRDFNDPDATYISFVTSAAEF--DGNLYLASLQ 336 (355)
Q Consensus 303 g~~~~~~~~~~g~~~~~~~~~~~~--~g~L~v~~~~ 336 (355)
|++...+..|.+. .+++++.. +..|||.-.+
T Consensus 519 Gel~~fl~~P~~a---EpnGiafSPD~ktLfV~vQH 551 (592)
T 4a9v_A 519 GEIRRFMVGPIGC---EVTGISFSPDQKTLFVGIQH 551 (592)
T ss_dssp CCEEEEEECCTTC---EEEEEEECTTSSEEEEEEES
T ss_pred CeEEEEEeCCCCc---cccCCEECCCCCEEEEEEeC
Confidence 8877767666653 56677765 4689997643
No 316
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=96.53 E-value=0.048 Score=53.03 Aligned_cols=119 Identities=17% Similarity=0.129 Sum_probs=75.3
Q ss_pred cccccEEEeCCCCEEEEEeCC---------------------CCeEEEEEeCCCCC----cceeEecc-c----------
Q 018474 190 YFANGIALSKNEDFVVVCESW---------------------KFRCRRYWLKGDRA----GILDAFIE-N---------- 233 (355)
Q Consensus 190 ~~pngi~~~~dg~~l~v~~~~---------------------~~~i~~~~~~~~~~----~~~~~~~~-~---------- 233 (355)
..|.++.++|....+|++-+. .+.|++|..++... ...+.++. .
T Consensus 384 ~RpEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g~p~~~~~~~~ 463 (592)
T 3zwu_A 384 DRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGTPK 463 (592)
T ss_dssp ECEEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTSGG
T ss_pred eccceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEeccCccccccccc
Confidence 357789999754459998764 25799998754221 11222221 0
Q ss_pred ----------CCCCcCceEECCCCCEEEEeecCCchhhHhhhcchhHHHHHHhccchhhcccCCCCCCceEEEEEeCCCC
Q 018474 234 ----------LPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDG 303 (355)
Q Consensus 234 ----------~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g 303 (355)
.-..||||.+|++|+|||++-......-.+. ...+..++.+++.+|
T Consensus 464 ~~~~~~~~~~~f~~PDNL~fd~~G~LwI~eDg~~~~~~~~~------------------------~~gnn~~~~~~~~~g 519 (592)
T 3zwu_A 464 GGSSNITPQNMFNSPDGLGFDKAGRLWILTDGDSSNAGDFA------------------------GMGNNQMLCADPATG 519 (592)
T ss_dssp GCCTTCCTTTCCCCEEEEEECTTCCEEEEECCCCCCSGGGT------------------------TTCSCEEEEECTTTC
T ss_pred ccccccCCCCCccCCcceEECCCCCEEEEecCCCccccccc------------------------ccccceEEEEeCCCC
Confidence 0124899999999999999976432111100 122346788888678
Q ss_pred eEEEEEECCCCCcccceeEEEEeC--CEEEEeec
Q 018474 304 KIIRDFNDPDATYISFVTSAAEFD--GNLYLASL 335 (355)
Q Consensus 304 ~~~~~~~~~~g~~~~~~~~~~~~~--g~L~v~~~ 335 (355)
+....+..|.|. .++++++.. ..||+.-.
T Consensus 520 ~~~rf~~~P~ga---E~TG~~fspDg~tlfvniQ 550 (592)
T 3zwu_A 520 EIRRFMVGPIGC---EVTGISFSPDQKTLFVGIQ 550 (592)
T ss_dssp CEEEEEECCTTC---EEEEEEECTTSSEEEEEEE
T ss_pred eEEEEEeCCCCc---cCcCeeECCCCCEEEEEEE
Confidence 888778888764 577777653 67888644
No 317
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=96.39 E-value=0.38 Score=47.74 Aligned_cols=166 Identities=13% Similarity=0.057 Sum_probs=91.1
Q ss_pred CcccEEEccCCc-EEE-EeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeeccccccccEEEeCCCCEEEEEeCC
Q 018474 133 FTNDVIAASDGT-LYF-TVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYFANGIALSKNEDFVVVCESW 210 (355)
Q Consensus 133 ~~~~l~~d~dG~-ly~-~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~~~~pngi~~~~dg~~l~v~~~~ 210 (355)
.+.++.++|||+ |-+ .+.. +.....|+.+|.++++............+++++ |++.++++...
T Consensus 130 ~l~~~~~SpDg~~lAy~~~~~--------------G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~ 194 (693)
T 3iuj_A 130 ALDQLSFSRDGRILAYSLSLA--------------GSDWREIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYD 194 (693)
T ss_dssp EEEEEEECTTSSEEEEEEECS--------------SCCEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESS
T ss_pred EEEEEEECCCCCEEEEEEecC--------------CCceEEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEec
Confidence 456678999995 333 3322 111236889999988754331111113467999 99988887654
Q ss_pred C------------CeEEEEEeCCCCCcceeEeccc--CCCCcCceEECCCCCEE-EEeecCCchhhHhhhcchhHHHHHH
Q 018474 211 K------------FRCRRYWLKGDRAGILDAFIEN--LPGGPDNINLAPDGSFW-IGLIKMNQTGVRAIQKCREKWELLD 275 (355)
Q Consensus 211 ~------------~~i~~~~~~~~~~~~~~~~~~~--~~g~p~~i~~d~~G~lw-v~~~~~~~~~~~~~~~~~~~~~~~~ 275 (355)
. ..|+++++.........++-+. .+..-.++.+++||+.. ++....
T Consensus 195 ~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~------------------- 255 (693)
T 3iuj_A 195 KPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANS------------------- 255 (693)
T ss_dssp CCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESS-------------------
T ss_pred CcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccC-------------------
Confidence 2 4588888744322222222211 11112345688999744 443321
Q ss_pred hccchhhcccCCCCCCceEEEEEeCCCCe-EEEEEECCCCCcccceeEEEEeCCEEEEeecC---CCeEEEeeCCCCC
Q 018474 276 AYPGLISLLLPMGSDAGARVVKVDGNDGK-IIRDFNDPDATYISFVTSAAEFDGNLYLASLQ---SNFIGILPLDGPE 349 (355)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~v~~~~~~~g~-~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~---~~~i~~~~~~~~~ 349 (355)
.....++.++.++++ ....+..+.+. ....+..++++||+.+.. ...|.++++.+..
T Consensus 256 --------------~~~~~i~~~d~~~~~~~~~~l~~~~~~---~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~ 316 (693)
T 3iuj_A 256 --------------TSGNRLYVKDLSQENAPLLTVQGDLDA---DVSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPG 316 (693)
T ss_dssp --------------SSCCEEEEEETTSTTCCCEEEECSSSS---CEEEEEEETTEEEEEECTTCTTCEEEEEETTSCC
T ss_pred --------------CCCcEEEEEECCCCCCceEEEeCCCCc---eEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCC
Confidence 111367777753332 34455554332 122244567898887654 3678888887644
No 318
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=96.37 E-value=0.57 Score=42.67 Aligned_cols=138 Identities=15% Similarity=0.080 Sum_probs=76.0
Q ss_pred eEEEEecCCEEEEEEcCCCeeEEee---cc---CCCcccCeEECC--------CCCEEEEeCCCcEEEE-c-CCC--eEE
Q 018474 65 ALYTATRDGWVKYFILHNETLVNWK---HI---DSQSLLGLTTTK--------DGGVILCDNEKGLLKV-T-EEG--VEA 126 (355)
Q Consensus 65 ~l~~~~~~g~i~~~~~~~g~~~~~~---~~---~~~p~~gl~~d~--------~g~L~v~~~~~gl~~~-~-~~g--~~~ 126 (355)
.+..+..|+.|..++..+++..... .. .+.+. .+++.+ +|++++....++.+++ + .++ ...
T Consensus 103 ~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~-~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~ 181 (393)
T 4gq1_A 103 FLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVN-DIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILA 181 (393)
T ss_dssp EEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEE-EEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEE
T ss_pred EEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceE-EEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeee
Confidence 3455677898988888777543321 11 23456 777764 6777776656665555 4 343 333
Q ss_pred EcCCcCCcccEEEccCC-cEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeec------------------
Q 018474 127 IVPDASFTNDVIAASDG-TLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHE------------------ 187 (355)
Q Consensus 127 ~~~~~~~~~~l~~d~dG-~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~------------------ 187 (355)
+......+.++++.|++ ++.++.+. .+.+..||..+++......
T Consensus 182 ~~~~~~~v~~v~~~p~~~~~l~~~~~-----------------d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~ 244 (393)
T 4gq1_A 182 GYPLSSPGISVQFRPSNPNQLIVGER-----------------NGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPL 244 (393)
T ss_dssp EEECSSCEEEEEEETTEEEEEEEEET-----------------TSEEEEEETTCCC----------CSCCCSEEEESGGG
T ss_pred ecCCCCCcEEEEECCCCCceEEecCC-----------------CCEEEEEECCCCcccccccccCCcccceEEecccccc
Confidence 32222567788999887 44444322 4456666665553211100
Q ss_pred -------c-ccccccEEEe-CCCCEEEEEeCCCCeEEEEEeCC
Q 018474 188 -------G-FYFANGIALS-KNEDFVVVCESWKFRCRRYWLKG 221 (355)
Q Consensus 188 -------~-~~~pngi~~~-~dg~~l~v~~~~~~~i~~~~~~~ 221 (355)
+ ...-..++++ +|++.+ ++....+.+..+++..
T Consensus 245 ~~~~~~~~~~~~v~~v~~~~~dg~~l-~s~s~d~~i~vwd~~~ 286 (393)
T 4gq1_A 245 VNTCHSSGIASSLANVRWIGSDGSGI-LAMCKSGAWLRWNLFA 286 (393)
T ss_dssp C------CCSSSCSEEEEETTTTCEE-EEECTTSEEEEEEC--
T ss_pred eeeeecccccccceeeeeecCCCCEE-EEEeCCCCEEEEECcc
Confidence 0 0112345555 788855 4555677888888743
No 319
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=96.33 E-value=0.58 Score=42.30 Aligned_cols=183 Identities=10% Similarity=-0.028 Sum_probs=91.1
Q ss_pred CCeEEEEec---CCEEEEEEc-CCCeeEEe-eccCCCcccCeEEC---CCCCEEEEeCCCcEEEE-c-CCC--eEEEcCC
Q 018474 63 KGALYTATR---DGWVKYFIL-HNETLVNW-KHIDSQSLLGLTTT---KDGGVILCDNEKGLLKV-T-EEG--VEAIVPD 130 (355)
Q Consensus 63 ~g~l~~~~~---~g~i~~~~~-~~g~~~~~-~~~~~~p~~gl~~d---~~g~L~v~~~~~gl~~~-~-~~g--~~~~~~~ 130 (355)
++.+..++. ++.|..++. .+|+...- ........ .+++. .++.++++...++.+++ + ++| ++.+...
T Consensus 144 ~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~-~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~ 222 (356)
T 2w18_A 144 KRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEET-ILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHID 222 (356)
T ss_dssp TTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSC-EEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred CCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCcee-eEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCC
Confidence 344444432 666666666 34543321 11111122 33443 37788888767776666 4 467 5666432
Q ss_pred ---cCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEee----ccccccccEEEeCCCCE
Q 018474 131 ---ASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH----EGFYFANGIALSKNEDF 203 (355)
Q Consensus 131 ---~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~----~~~~~pngi~~~~dg~~ 203 (355)
...+..++++|+|.+.++.+.. .....+..+...+.+..+|+++++..... +......-+..+.++.
T Consensus 223 ~~~v~~v~~vafSpdG~~lvs~s~~-----~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~- 296 (356)
T 2w18_A 223 DSYQASVCHKAYSEMGLLFIVLSHP-----CAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVKDH- 296 (356)
T ss_dssp C---CCCEEEEEEETTEEEEEEC-----------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEETT-
T ss_pred CcceeeeEEEEECCCCCEEEEeccC-----CCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccCCC-
Confidence 1456677899999877654321 01122334444567777899888653221 0000001122222233
Q ss_pred EEEEeCCCCeEEEEEeCCCCCcceeEecccCCCCcC-ceEECCCCCEEEEeec
Q 018474 204 VVVCESWKFRCRRYWLKGDRAGILDAFIENLPGGPD-NINLAPDGSFWIGLIK 255 (355)
Q Consensus 204 l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~-~i~~d~~G~lwv~~~~ 255 (355)
+.++.+..+.|..+|+...+. ...+. ....... .+++.++|++.++...
T Consensus 297 ~lASgS~DgTIkIWDl~tGk~--l~tL~-gH~~~vvs~vafSPDG~~LaSGS~ 346 (356)
T 2w18_A 297 CAAAILTSGTIAIWDLLLGQC--TALLP-PVSDQHWSFVKWSGTDSHLLAGQK 346 (356)
T ss_dssp EEEEEETTSCEEEEETTTCSE--EEEEC-CC--CCCCEEEECSSSSEEEEECT
T ss_pred EEEEEcCCCcEEEEECCCCcE--EEEec-CCCCCeEEEEEECCCCCEEEEEEC
Confidence 455555667888888854321 22222 1111123 3678999998776654
No 320
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=96.25 E-value=0.52 Score=42.58 Aligned_cols=137 Identities=13% Similarity=0.007 Sum_probs=71.7
Q ss_pred CeEEEEecCCEEEEEEcCCCeeEEeeccCC----CcccCeEECCCCCEEEEeCC------------CcEEE-EcC-CC--
Q 018474 64 GALYTATRDGWVKYFILHNETLVNWKHIDS----QSLLGLTTTKDGGVILCDNE------------KGLLK-VTE-EG-- 123 (355)
Q Consensus 64 g~l~~~~~~g~i~~~~~~~g~~~~~~~~~~----~p~~gl~~d~~g~L~v~~~~------------~gl~~-~~~-~g-- 123 (355)
..|..++.|+.|..+|.++|+......... ... .+++.++|.+.++... .+.++ .+. +|
T Consensus 194 ~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~-~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~ 272 (356)
T 2w18_A 194 EALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVC-HKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLS 272 (356)
T ss_dssp TEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCE-EEEEEETTEEEEEEC------------CCEEEEEEETTTTEE
T ss_pred ceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeE-EEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEE
Confidence 445556889999999999997654433221 223 4468888887654221 12222 232 33
Q ss_pred eEEEcC--C-cCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeeccc-cccc-cEEEe
Q 018474 124 VEAIVP--D-ASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGF-YFAN-GIALS 198 (355)
Q Consensus 124 ~~~~~~--~-~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~~-~~pn-gi~~~ 198 (355)
+..+.- + .....-+..+.+|.+.++ +...+.+..||..+++......+. .... .++++
T Consensus 273 l~v~~~~~p~Gh~~~~lsg~~sg~~lAS-----------------gS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafS 335 (356)
T 2w18_A 273 VGVMLYCLPPGQAGRFLEGDVKDHCAAA-----------------ILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWS 335 (356)
T ss_dssp EEEEEECCCTTCCCCEEEEEEETTEEEE-----------------EETTSCEEEEETTTCSEEEEECCC--CCCCEEEEC
T ss_pred EEEEEeeccCCCcceeEccccCCCEEEE-----------------EcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEEC
Confidence 222110 0 000000111111222222 223567888999888754433322 2233 47999
Q ss_pred CCCCEEEEEeCCCCeEEEEEe
Q 018474 199 KNEDFVVVCESWKFRCRRYWL 219 (355)
Q Consensus 199 ~dg~~l~v~~~~~~~i~~~~~ 219 (355)
|||+.| ++.+..+.|..+++
T Consensus 336 PDG~~L-aSGS~D~TIklWd~ 355 (356)
T 2w18_A 336 GTDSHL-LAGQKDGNIFVYHY 355 (356)
T ss_dssp SSSSEE-EEECTTSCEEEEEE
T ss_pred CCCCEE-EEEECCCcEEEecC
Confidence 999954 55566777877764
No 321
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=96.08 E-value=0.81 Score=41.63 Aligned_cols=68 Identities=10% Similarity=0.154 Sum_probs=40.7
Q ss_pred CCCceEEEee--------CCCeEEEEecCCEEEEEEcCCCee-EEeeccCCCcccCeEECCCCC-EEEEeCCCcEE-EEc
Q 018474 52 NHPEDVSVVV--------SKGALYTATRDGWVKYFILHNETL-VNWKHIDSQSLLGLTTTKDGG-VILCDNEKGLL-KVT 120 (355)
Q Consensus 52 ~~p~~i~~d~--------~~g~l~~~~~~g~i~~~~~~~g~~-~~~~~~~~~p~~gl~~d~~g~-L~v~~~~~gl~-~~~ 120 (355)
..-.++++.| ++..|..++.|+.|..+|..++.. .........+. ++++.+++. ++++...++.+ .++
T Consensus 137 ~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~-~v~~~p~~~~~l~~~~~d~~v~~wd 215 (393)
T 4gq1_A 137 NFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGI-SVQFRPSNPNQLIVGERNGNIRIFD 215 (393)
T ss_dssp SCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEE-EEEEETTEEEEEEEEETTSEEEEEE
T ss_pred CceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcE-EEEECCCCCceEEecCCCCEEEEEE
Confidence 3446677764 344566678899999999866543 33323334566 888988763 44433344544 445
No 322
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=95.72 E-value=0.97 Score=39.68 Aligned_cols=209 Identities=12% Similarity=-0.000 Sum_probs=105.4
Q ss_pred CEEEEEEcCCCeeEEeeccC--CCcccCeEECCCCCEEEEeCC--------C----cEEEEcC-CC-eEEEcCCc-CCcc
Q 018474 73 GWVKYFILHNETLVNWKHID--SQSLLGLTTTKDGGVILCDNE--------K----GLLKVTE-EG-VEAIVPDA-SFTN 135 (355)
Q Consensus 73 g~i~~~~~~~g~~~~~~~~~--~~p~~gl~~d~~g~L~v~~~~--------~----gl~~~~~-~g-~~~~~~~~-~~~~ 135 (355)
..+.++|+.++++....... .+.. .-+.-.++.||+.... . .+++++. ++ .+.+.... ..-.
T Consensus 13 ~~~~~yd~~~~~W~~~~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~ 91 (315)
T 4asc_A 13 EGAVAYDPAANECYCASLSSQVPKNH-VSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCL 91 (315)
T ss_dssp TEEEEEETTTTEEEEEECCCCSCSSE-EEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEES
T ss_pred CceEEECCCCCeEecCCCCCCCCccc-eEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhc
Confidence 57999999999987522111 1211 1122347788885431 1 1677784 55 55443322 1111
Q ss_pred cEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeecccc-ccccEEEeCCCCEEEEEeCC----
Q 018474 136 DVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFY-FANGIALSKNEDFVVVCESW---- 210 (355)
Q Consensus 136 ~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~~~-~pngi~~~~dg~~l~v~~~~---- 210 (355)
.-++.-++.||+........ .......+++||+.+++++.+..... .....+..-+++ +|+..-.
T Consensus 92 ~~~~~~~~~lyv~GG~~~~~---------~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~-iyv~GG~~~~~ 161 (315)
T 4asc_A 92 FGLGEALNSIYVVGGREIKD---------GERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDL-VYVIGGKGSDR 161 (315)
T ss_dssp CEEEEETTEEEEECCEESST---------TCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTE-EEEECCBCTTS
T ss_pred eeEEEECCEEEEEeCCcCCC---------CCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCE-EEEEeCCCCCC
Confidence 22222367888864320000 01223469999999999887653211 111122223444 7776532
Q ss_pred --CCeEEEEEeCCCCCcceeEecccCCCCcC---ceEECCCCCEEEEeecCCchhhHhhhcchhHHHHHHhccchhhccc
Q 018474 211 --KFRCRRYWLKGDRAGILDAFIENLPGGPD---NINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLL 285 (355)
Q Consensus 211 --~~~i~~~~~~~~~~~~~~~~~~~~~g~p~---~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (355)
.+.+++|++... +.+... .+|. |. ..+. -++++||.......
T Consensus 162 ~~~~~~~~yd~~~~---~W~~~~-~~p~-~r~~~~~~~-~~~~iyv~GG~~~~--------------------------- 208 (315)
T 4asc_A 162 KCLNKMCVYDPKKF---EWKELA-PMQT-ARSLFGATV-HDGRIIVAAGVTDT--------------------------- 208 (315)
T ss_dssp CBCCCEEEEETTTT---EEEECC-CCSS-CCBSCEEEE-ETTEEEEEEEECSS---------------------------
T ss_pred cccceEEEEeCCCC---eEEECC-CCCC-chhceEEEE-ECCEEEEEeccCCC---------------------------
Confidence 246889987542 233222 2221 21 1222 25678876543211
Q ss_pred CCCCCCceEEEEEeCCCCeEEEEEEC-CCCCcccceeEEEEeCCEEEEe
Q 018474 286 PMGSDAGARVVKVDGNDGKIIRDFND-PDATYISFVTSAAEFDGNLYLA 333 (355)
Q Consensus 286 ~~~~~~~~~v~~~~~~~g~~~~~~~~-~~g~~~~~~~~~~~~~g~L~v~ 333 (355)
.....+.+||+++.+.. .... +..+ ....++..+++||+-
T Consensus 209 ----~~~~~~~~yd~~~~~W~-~~~~~p~~r---~~~~~~~~~~~l~v~ 249 (315)
T 4asc_A 209 ----GLTSSAEVYSITDNKWA-PFEAFPQER---SSLSLVSLVGTLYAI 249 (315)
T ss_dssp ----SEEEEEEEEETTTTEEE-EECCCSSCC---BSCEEEEETTEEEEE
T ss_pred ----CccceEEEEECCCCeEE-ECCCCCCcc---cceeEEEECCEEEEE
Confidence 11246899999455444 3432 3322 233455668888883
No 323
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=95.56 E-value=2 Score=42.18 Aligned_cols=121 Identities=12% Similarity=0.050 Sum_probs=73.3
Q ss_pred CCceEEEeeCCCeEEEE-ecC-----------CEEEEEEcCCCeeEEeeccC----CCcccCeEECCCCCEEEEeCC--C
Q 018474 53 HPEDVSVVVSKGALYTA-TRD-----------GWVKYFILHNETLVNWKHID----SQSLLGLTTTKDGGVILCDNE--K 114 (355)
Q Consensus 53 ~p~~i~~d~~~g~l~~~-~~~-----------g~i~~~~~~~g~~~~~~~~~----~~p~~gl~~d~~g~L~v~~~~--~ 114 (355)
.+.+.++.+.++.+|+. ..+ ..+.++|+.+++++...... .... +.++..+|+||+.... .
T Consensus 187 ~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~-~~~~~~~g~lyv~GG~~~~ 265 (656)
T 1k3i_A 187 VPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCP-GISMDGNGQIVVTGGNDAK 265 (656)
T ss_dssp CCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSC-EEEECTTSCEEEECSSSTT
T ss_pred CceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccc-cccCCCCCCEEEeCCCCCC
Confidence 45566776437788864 221 15788999888876553221 1122 3566678999997642 2
Q ss_pred cEEEEcC-CC-eEEEcCCc--CCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEe
Q 018474 115 GLLKVTE-EG-VEAIVPDA--SFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVL 185 (355)
Q Consensus 115 gl~~~~~-~g-~~~~~~~~--~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~ 185 (355)
.+.++|+ ++ .+.+.... ..-...++-++|+||+..... . .......+.+|||.+++++.+
T Consensus 266 ~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~--~---------~~~~~~~~e~yd~~t~~W~~~ 329 (656)
T 1k3i_A 266 KTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSW--S---------GGVFEKNGEVYSPSSKTWTSL 329 (656)
T ss_dssp CEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCC--C---------SSSCCCCEEEEETTTTEEEEE
T ss_pred ceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcc--c---------CCcccccceEeCCCCCcceeC
Confidence 4888884 55 44443321 333445666789999875420 0 001134689999999998875
No 324
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=95.35 E-value=2 Score=42.12 Aligned_cols=119 Identities=9% Similarity=0.057 Sum_probs=64.1
Q ss_pred eEEEeeCCCeEEEEe--cCCEEEEEEcCCCeeEEeeccC-CC-cccCeEECCCCCEEEEeCC-------CcEEEEcC-CC
Q 018474 56 DVSVVVSKGALYTAT--RDGWVKYFILHNETLVNWKHID-SQ-SLLGLTTTKDGGVILCDNE-------KGLLKVTE-EG 123 (355)
Q Consensus 56 ~i~~d~~~g~l~~~~--~~g~i~~~~~~~g~~~~~~~~~-~~-p~~gl~~d~~g~L~v~~~~-------~gl~~~~~-~g 123 (355)
+.++. .++.+|+.. .+..+.++|+.++++....... .+ -+ +.+.-++|+|||.... ..+.++|+ ++
T Consensus 247 ~~~~~-~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~-s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~ 324 (656)
T 1k3i_A 247 GISMD-GNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQ-SSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSK 324 (656)
T ss_dssp EEEEC-TTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSC-EEEECTTSCEEEECCCCCSSSCCCCEEEEETTTT
T ss_pred cccCC-CCCCEEEeCCCCCCceEEecCcCCceeECCCCCcccccc-ceEEecCCeEEEEeCcccCCcccccceEeCCCCC
Confidence 35555 567777743 2457999999999888764322 22 12 3455568999997541 23778885 55
Q ss_pred -eEEEcCC----c-CCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEE
Q 018474 124 -VEAIVPD----A-SFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTV 184 (355)
Q Consensus 124 -~~~~~~~----~-~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~ 184 (355)
.+.+... . ..-...++..++.+|+..... ..++.......+.+||++++++..
T Consensus 325 ~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~--------g~~~~~~~~~~v~~yd~~~~~w~~ 383 (656)
T 1k3i_A 325 TWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKK--------GSVFQAGPSTAMNWYYTSGSGDVK 383 (656)
T ss_dssp EEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGG--------GCEEECCSSSEEEEEECSTTCEEE
T ss_pred cceeCCCccccccccccccceeecCCceEEEECCC--------CcEEEecCccceeeeecCCcceee
Confidence 5554221 1 000111222456666543210 001111224478999998877543
No 325
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=95.31 E-value=1.3 Score=38.64 Aligned_cols=218 Identities=11% Similarity=0.103 Sum_probs=112.4
Q ss_pred CEEEEEEcCCCeeEEeeccCC-Cc-ccCeEECCCCCEEEEeCC----------CcEEEEcC-CC-eEEEcCCc-CCcccE
Q 018474 73 GWVKYFILHNETLVNWKHIDS-QS-LLGLTTTKDGGVILCDNE----------KGLLKVTE-EG-VEAIVPDA-SFTNDV 137 (355)
Q Consensus 73 g~i~~~~~~~g~~~~~~~~~~-~p-~~gl~~d~~g~L~v~~~~----------~gl~~~~~-~g-~~~~~~~~-~~~~~l 137 (355)
..+.++|+.+++++....... +. + +++. -++.||+.... ..+++++. +. .+.+.... ......
T Consensus 39 ~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~ 116 (308)
T 1zgk_A 39 SYLEAYNPSNGTWLRLADLQVPRSGL-AGCV-VGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIG 116 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSC-EEEE-ETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCE
T ss_pred ceEEEEcCCCCeEeECCCCCcccccc-eEEE-ECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccE
Confidence 468999999999887643221 11 2 2333 36788886422 24788884 55 55544322 112222
Q ss_pred EEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeecccc--ccccEEEeCCCCEEEEEeCC-----
Q 018474 138 IAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFY--FANGIALSKNEDFVVVCESW----- 210 (355)
Q Consensus 138 ~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~~~--~pngi~~~~dg~~l~v~~~~----- 210 (355)
++.-+|.||+...... ......+++||+.+++++.+..... .....+.. ++ .+|+..-.
T Consensus 117 ~~~~~~~iyv~GG~~~------------~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~ 182 (308)
T 1zgk_A 117 VGVIDGHIYAVGGSHG------------CIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL-NR-LLYAVGGFDGTNR 182 (308)
T ss_dssp EEEETTEEEEECCEET------------TEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TT-EEEEECCBCSSCB
T ss_pred EEEECCEEEEEcCCCC------------CcccccEEEECCCCCeEeECCCCCccccceEEEEE-CC-EEEEEeCCCCCCc
Confidence 2233778988643200 0113468999999999887643211 11123332 44 47776421
Q ss_pred CCeEEEEEeCCCCCcceeEecccCCCCcC---ceEECCCCCEEEEeecCCchhhHhhhcchhHHHHHHhccchhhcccCC
Q 018474 211 KFRCRRYWLKGDRAGILDAFIENLPGGPD---NINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPM 287 (355)
Q Consensus 211 ~~~i~~~~~~~~~~~~~~~~~~~~~g~p~---~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (355)
.+.+++|+++.. +.+... .++. |. .++.. +++||+-......
T Consensus 183 ~~~~~~yd~~~~---~W~~~~-~~p~-~r~~~~~~~~-~~~iyv~GG~~~~----------------------------- 227 (308)
T 1zgk_A 183 LNSAECYYPERN---EWRMIT-AMNT-IRSGAGVCVL-HNCIYAAGGYDGQ----------------------------- 227 (308)
T ss_dssp CCCEEEEETTTT---EEEECC-CCSS-CCBSCEEEEE-TTEEEEECCBCSS-----------------------------
T ss_pred CceEEEEeCCCC---eEeeCC-CCCC-ccccceEEEE-CCEEEEEeCCCCC-----------------------------
Confidence 356889997542 222222 2221 11 12232 4678876533210
Q ss_pred CCCCceEEEEEeCCCCeEEEEEEC-CCCCcccceeEEEEeCCEEEEee-c----CCCeEEEeeCCC
Q 018474 288 GSDAGARVVKVDGNDGKIIRDFND-PDATYISFVTSAAEFDGNLYLAS-L----QSNFIGILPLDG 347 (355)
Q Consensus 288 ~~~~~~~v~~~~~~~g~~~~~~~~-~~g~~~~~~~~~~~~~g~L~v~~-~----~~~~i~~~~~~~ 347 (355)
.....+.+||+++.+. ..+.. +..+ ....++..+++||+-. . ..+.+.+|++.+
T Consensus 228 --~~~~~v~~yd~~~~~W-~~~~~~p~~r---~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~ 287 (308)
T 1zgk_A 228 --DQLNSVERYDVETETW-TFVAPMKHRR---SALGITVHQGRIYVLGGYDGHTFLDSVECYDPDT 287 (308)
T ss_dssp --SBCCCEEEEETTTTEE-EECCCCSSCC---BSCEEEEETTEEEEECCBCSSCBCCEEEEEETTT
T ss_pred --CccceEEEEeCCCCcE-EECCCCCCCc---cceEEEEECCEEEEEcCcCCCcccceEEEEcCCC
Confidence 1113589999944444 33332 2222 2234555688888843 2 234566776653
No 326
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=95.28 E-value=2.9 Score=42.21 Aligned_cols=97 Identities=7% Similarity=0.047 Sum_probs=60.6
Q ss_pred CCCceEEEeeC-CCeEEEEecCCEEEEEEcCCCeeEEeeccC-------CCcccCeEECCC--CCEEEEeCC------Cc
Q 018474 52 NHPEDVSVVVS-KGALYTATRDGWVKYFILHNETLVNWKHID-------SQSLLGLTTTKD--GGVILCDNE------KG 115 (355)
Q Consensus 52 ~~p~~i~~d~~-~g~l~~~~~~g~i~~~~~~~g~~~~~~~~~-------~~p~~gl~~d~~--g~L~v~~~~------~g 115 (355)
..-.+|+++|. .+.+|+++..+.|++-+-....++.+.... .... .|++|+. +.+|++... .+
T Consensus 15 g~i~~i~~~p~~~~~~~a~~~~ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~-~ia~dp~~~~~i~~~~g~~~~~~~~~ 93 (789)
T 1sqj_A 15 GYITGIVAHPKTKDLLYARTDIGGAYRWDAGTSKWIPLNDFIEAQDMNIMGTE-SIALDPNNPDRLYLAQGRYVGDEWAA 93 (789)
T ss_dssp SCEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCCGGGGGGCSEE-EEEEETTEEEEEEEEECSCTTSSCCE
T ss_pred CcEEEEEECCCCCCEEEEEecCCCEEEecCCCCCeeECccCCCcccccCCcee-EEEECCCCCCEEEEEeCccCCCcccE
Confidence 45677888854 478999998888998876455677654321 2355 7888864 579998743 35
Q ss_pred EEEEcCCC--eEEEcCCc---------CCcccEEEccC--CcEEEEe
Q 018474 116 LLKVTEEG--VEAIVPDA---------SFTNDVIAASD--GTLYFTV 149 (355)
Q Consensus 116 l~~~~~~g--~~~~~~~~---------~~~~~l~~d~d--G~ly~~d 149 (355)
|++=...| -+.+.... ..+..+++++. +.+|+..
T Consensus 94 v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~ 140 (789)
T 1sqj_A 94 FYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGT 140 (789)
T ss_dssp EEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEEC
T ss_pred EEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEe
Confidence 55554445 44433211 12356888873 4677754
No 327
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=95.26 E-value=1.4 Score=38.42 Aligned_cols=221 Identities=10% Similarity=0.044 Sum_probs=114.5
Q ss_pred CCEEEEEEcCCCeeEEeeccCC-Cc-ccCeEECCCCCEEEEeC-----CCcEEEEcC-CC-eEEEcCCc-CCcccEEEcc
Q 018474 72 DGWVKYFILHNETLVNWKHIDS-QS-LLGLTTTKDGGVILCDN-----EKGLLKVTE-EG-VEAIVPDA-SFTNDVIAAS 141 (355)
Q Consensus 72 ~g~i~~~~~~~g~~~~~~~~~~-~p-~~gl~~d~~g~L~v~~~-----~~gl~~~~~-~g-~~~~~~~~-~~~~~l~~d~ 141 (355)
...++++|+.++++........ +. + +++. -++.||+... ...+++++. ++ .+.+.... ..-...++.-
T Consensus 23 ~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~ 100 (306)
T 3ii7_A 23 PQSCRYFNPKDYSWTDIRCPFEKRRDA-ACVF-WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA 100 (306)
T ss_dssp TTSEEEEETTTTEEEECCCCSCCCBSC-EEEE-ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE
T ss_pred CceEEEecCCCCCEecCCCCCccccee-EEEE-ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE
Confidence 3568999999999887643321 11 2 2222 3678888643 135788884 55 45444322 1122222233
Q ss_pred CCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeecccc--ccccEEEeCCCCEEEEEeCC---------
Q 018474 142 DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFY--FANGIALSKNEDFVVVCESW--------- 210 (355)
Q Consensus 142 dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~~~--~pngi~~~~dg~~l~v~~~~--------- 210 (355)
++.||+...... .......+++||+.+++++.+..... .....+. -++ .+|+..-.
T Consensus 101 ~~~iyv~GG~~~-----------~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~-~iyv~GG~~~~~~~~~~ 167 (306)
T 3ii7_A 101 EGKIYTSGGSEV-----------GNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE-ANG-LIYVCGGSLGNNVSGRV 167 (306)
T ss_dssp TTEEEEECCBBT-----------TBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETT-EEEEECCEESCTTTCEE
T ss_pred CCEEEEECCCCC-----------CCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE-ECC-EEEEECCCCCCCCcccc
Confidence 778988643200 01123469999999999887643211 1112233 344 47776521
Q ss_pred CCeEEEEEeCCCCCcceeEecccCCC--CcCceEECCCCCEEEEeecCCchhhHhhhcchhHHHHHHhccchhhcccCCC
Q 018474 211 KFRCRRYWLKGDRAGILDAFIENLPG--GPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMG 288 (355)
Q Consensus 211 ~~~i~~~~~~~~~~~~~~~~~~~~~g--~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (355)
.+.+++|+++.. +.+... .++. ..-.++.- +++||+.-.....
T Consensus 168 ~~~~~~yd~~~~---~W~~~~-~~p~~r~~~~~~~~-~~~i~v~GG~~~~------------------------------ 212 (306)
T 3ii7_A 168 LNSCEVYDPATE---TWTELC-PMIEARKNHGLVFV-KDKIFAVGGQNGL------------------------------ 212 (306)
T ss_dssp CCCEEEEETTTT---EEEEEC-CCSSCCBSCEEEEE-TTEEEEECCEETT------------------------------
T ss_pred cceEEEeCCCCC---eEEECC-CccchhhcceEEEE-CCEEEEEeCCCCC------------------------------
Confidence 456889987543 333332 2221 11112222 5678876433110
Q ss_pred CCCceEEEEEeCCCCeEEEEEEC-CCCCcccceeEEEEeCCEEEEe-ec----CCCeEEEeeCCC
Q 018474 289 SDAGARVVKVDGNDGKIIRDFND-PDATYISFVTSAAEFDGNLYLA-SL----QSNFIGILPLDG 347 (355)
Q Consensus 289 ~~~~~~v~~~~~~~g~~~~~~~~-~~g~~~~~~~~~~~~~g~L~v~-~~----~~~~i~~~~~~~ 347 (355)
.....+.+||+++.+. +.+.. +..+ ....++..+++||+. .. ..+.+.+|++.+
T Consensus 213 -~~~~~~~~yd~~~~~W-~~~~~~p~~r---~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~ 272 (306)
T 3ii7_A 213 -GGLDNVEYYDIKLNEW-KMVSPMPWKG---VTVKCAAVGSIVYVLAGFQGVGRLGHILEYNTET 272 (306)
T ss_dssp -EEBCCEEEEETTTTEE-EECCCCSCCB---SCCEEEEETTEEEEEECBCSSSBCCEEEEEETTT
T ss_pred -CCCceEEEeeCCCCcE-EECCCCCCCc---cceeEEEECCEEEEEeCcCCCeeeeeEEEEcCCC
Confidence 0013589999944544 33322 2222 223445558888884 32 235667776654
No 328
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=95.14 E-value=1.5 Score=38.39 Aligned_cols=132 Identities=14% Similarity=0.127 Sum_probs=71.1
Q ss_pred EEEEEcCCCeeEEeeccCC-C-cccCeEECCCCCEEEEeCC--------CcEEEEcC-CC-eEEEcCCc-CCcccEEEcc
Q 018474 75 VKYFILHNETLVNWKHIDS-Q-SLLGLTTTKDGGVILCDNE--------KGLLKVTE-EG-VEAIVPDA-SFTNDVIAAS 141 (355)
Q Consensus 75 i~~~~~~~g~~~~~~~~~~-~-p~~gl~~d~~g~L~v~~~~--------~gl~~~~~-~g-~~~~~~~~-~~~~~l~~d~ 141 (355)
++++|+.+++++....... + -+ +++. -++.||+.... ..+.++|. +. .+.+.... ..-..-++.-
T Consensus 80 ~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 157 (318)
T 2woz_A 80 FFQLDNVSSEWVGLPPLPSARCLF-GLGE-VDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISH 157 (318)
T ss_dssp EEEEETTTTEEEECSCBSSCBCSC-EEEE-ETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEE
T ss_pred EEEEeCCCCcEEECCCCCcccccc-ceEE-ECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEE
Confidence 7899999999887643221 1 12 2333 36788885421 13778884 55 55544322 1112222335
Q ss_pred CCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeeccc--cccccEEEeCCCCEEEEEeCC-----CCeE
Q 018474 142 DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGF--YFANGIALSKNEDFVVVCESW-----KFRC 214 (355)
Q Consensus 142 dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~~--~~pngi~~~~dg~~l~v~~~~-----~~~i 214 (355)
+|.||+...... .......+++||+.+++++.+.... ....+++. -++ .+|+..-. .+.+
T Consensus 158 ~~~iyv~GG~~~-----------~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~-~iyv~GG~~~~~~~~~~ 224 (318)
T 2woz_A 158 NGMIYCLGGKTD-----------DKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAI-HKG-KIVIAGGVTEDGLSASV 224 (318)
T ss_dssp TTEEEEECCEES-----------SSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETT-EEEEEEEEETTEEEEEE
T ss_pred CCEEEEEcCCCC-----------CCCccceEEEEcCCCCEEEECCCCCCCcccceEEE-ECC-EEEEEcCcCCCCccceE
Confidence 788988643100 0112346999999999998764321 11122333 344 46666411 2457
Q ss_pred EEEEeCC
Q 018474 215 RRYWLKG 221 (355)
Q Consensus 215 ~~~~~~~ 221 (355)
++|+++.
T Consensus 225 ~~yd~~~ 231 (318)
T 2woz_A 225 EAFDLKT 231 (318)
T ss_dssp EEEETTT
T ss_pred EEEECCC
Confidence 7888754
No 329
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=95.12 E-value=3 Score=41.63 Aligned_cols=96 Identities=14% Similarity=0.123 Sum_probs=61.8
Q ss_pred CCceEEEeeCC-CeEEEEecCCEEEEEEcCCCeeEEeeccC-------CCcccCeEECC--CCCEEEEeCC---------
Q 018474 53 HPEDVSVVVSK-GALYTATRDGWVKYFILHNETLVNWKHID-------SQSLLGLTTTK--DGGVILCDNE--------- 113 (355)
Q Consensus 53 ~p~~i~~d~~~-g~l~~~~~~g~i~~~~~~~g~~~~~~~~~-------~~p~~gl~~d~--~g~L~v~~~~--------- 113 (355)
...+|+++|.+ +.+|+++..|+|+|.+.....++.+.... .... +|++|+ .+++|++...
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~-~i~~dp~~~~~v~v~~~~~~~~~~~~~ 102 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWDPSTETWIPLLDHFQMDEYSYYGVE-SIATDPVDPNRVYIVAGMYTNDWLPNM 102 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEETTTTEEEECCTTCCGGGGGGGCEE-EEEECSSSTTCEEEEECSCSSSSSCCC
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeCCCCCCEEECcCccCcccccCCCcc-eEEeCCCCCCEEEEEecccccccccCC
Confidence 56789998643 78999987788999987566777754321 1245 788886 3589998631
Q ss_pred CcEEEEcCCC--eEEEcCCc---------CCcccEEEccC--CcEEEEe
Q 018474 114 KGLLKVTEEG--VEAIVPDA---------SFTNDVIAASD--GTLYFTV 149 (355)
Q Consensus 114 ~gl~~~~~~g--~~~~~~~~---------~~~~~l~~d~d--G~ly~~d 149 (355)
.++++=...| .+.+.... .....|+++|. +.+|++.
T Consensus 103 ~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~ 151 (737)
T 2cn3_A 103 GAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGT 151 (737)
T ss_dssp CEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEEC
T ss_pred ccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEee
Confidence 3566655444 44433221 12367899874 4788764
No 330
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=94.97 E-value=0.031 Score=51.12 Aligned_cols=50 Identities=8% Similarity=-0.116 Sum_probs=27.4
Q ss_pred CCeEEEEeCCCCeEEEeeccccccccEEEeCCCCEEEEEeCCCCeEEEEEeC
Q 018474 169 YGQLRKYDPKLKETTVLHEGFYFANGIALSKNEDFVVVCESWKFRCRRYWLK 220 (355)
Q Consensus 169 ~g~l~~~dp~~~~~~~~~~~~~~pngi~~~~dg~~l~v~~~~~~~i~~~~~~ 220 (355)
.+.++.+|.++|+....... .......+..+++ +|+..+..+.|+.++.+
T Consensus 18 dg~v~a~d~~tG~~~W~~~~-~~~~s~p~~~~g~-~~v~~s~dg~l~a~d~~ 67 (369)
T 2hz6_A 18 DGSLHAVSKRTGSIKWTLKE-DPVLQVPTHVEEP-AFLPDPNDGSLYTLGSK 67 (369)
T ss_dssp TSEEEEEETTTCCEEEEEEC-CCSCCCC-----C-CEEECTTTCCEEEC---
T ss_pred CCEEEEEECCCCCEEEEecC-CCceecceEcCCC-EEEEeCCCCEEEEEECC
Confidence 45799999988876544332 2222233445665 67776677889999874
No 331
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=94.76 E-value=1.2 Score=44.60 Aligned_cols=103 Identities=12% Similarity=-0.018 Sum_probs=56.4
Q ss_pred CcccEEEc-cCCc-EEEEeCCCCCCCccccccccccCCCCeEEEEeCCCC-eEEEeeccc-cccccEEEeCCCCEEEEEe
Q 018474 133 FTNDVIAA-SDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLK-ETTVLHEGF-YFANGIALSKNEDFVVVCE 208 (355)
Q Consensus 133 ~~~~l~~d-~dG~-ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~-~~~~~~~~~-~~pngi~~~~dg~~l~v~~ 208 (355)
...+..++ |||+ |.++... .+.....|+.+|.+++ +.. ...+ ....+++++|||+.++++.
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~-------------~G~~~~~l~v~dl~~g~~~l--~~~~~~~~~~~~WspDg~~l~y~~ 239 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDM-------------SGNEVYTIEFKRISDPSQTI--ADKVSGTNGEIVWGPDHTSLFYVT 239 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEES-------------SSSSCEEEEEEETTCTTCCC--CCCEEEECSCCEECSSTTEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeC-------------CCCceEEEEEEECCCCCEeC--CccccCceeeEEEecCCCEEEEEE
Confidence 35567899 9995 5444322 0111235899998887 521 1111 1135789999998787775
Q ss_pred CCC----CeEEEEEeCCCCCcceeEecccCCCCcCceEECCCCCEE
Q 018474 209 SWK----FRCRRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFW 250 (355)
Q Consensus 209 ~~~----~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lw 250 (355)
... ..|+++++.+.......++.+....+-.+...++||+..
T Consensus 240 ~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l 285 (751)
T 2xe4_A 240 KDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTL 285 (751)
T ss_dssp ECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEE
T ss_pred ECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEE
Confidence 432 368888875432211222221111222345678899743
No 332
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=94.65 E-value=3.6 Score=40.82 Aligned_cols=144 Identities=8% Similarity=0.063 Sum_probs=83.6
Q ss_pred CCeEEEE-ec----CCEEEEEEcCCCeeEEee-c------cCCC-cccCeEECC-CCCEEEEeCC-------CcEEEEcC
Q 018474 63 KGALYTA-TR----DGWVKYFILHNETLVNWK-H------IDSQ-SLLGLTTTK-DGGVILCDNE-------KGLLKVTE 121 (355)
Q Consensus 63 ~g~l~~~-~~----~g~i~~~~~~~g~~~~~~-~------~~~~-p~~gl~~d~-~g~L~v~~~~-------~gl~~~~~ 121 (355)
++.+|+- .. ...++++|+.++++.... . ...+ -+ +++.-. +|+|||.... ..+++++.
T Consensus 397 ~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~h-s~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 397 GNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCH-TFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp SSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSC-EEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred CCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccce-EEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 5567763 21 245899999999988876 3 1111 12 333333 7889986421 24788884
Q ss_pred -CC-eEEEcCCc--CCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeecc--cc----c
Q 018474 122 -EG-VEAIVPDA--SFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEG--FY----F 191 (355)
Q Consensus 122 -~g-~~~~~~~~--~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~--~~----~ 191 (355)
+. .+.+.... ..-...++-.+|.||+..... ..+.+++||+.+++++.+... .. .
T Consensus 476 ~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~---------------~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~ 540 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVT---------------EGPAMLLYNVTEEIFKDVTPKDEFFQNSLV 540 (695)
T ss_dssp TTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBC---------------SSCSEEEEETTTTEEEECCCSSGGGGSCCB
T ss_pred CCCcEEECCCCCCCcccceEEEEcCCEEEEECCCC---------------CCCCEEEEECCCCceEEccCCCCCCCcccc
Confidence 55 55443322 222334443588899864320 011699999999999877542 11 1
Q ss_pred cccEEEeCCCCEEEEEeCC-------CCeEEEEEeCCC
Q 018474 192 ANGIALSKNEDFVVVCESW-------KFRCRRYWLKGD 222 (355)
Q Consensus 192 pngi~~~~dg~~l~v~~~~-------~~~i~~~~~~~~ 222 (355)
...+++..+...+|+..-. .+.+++|+++..
T Consensus 541 ~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~ 578 (695)
T 2zwa_A 541 SAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAE 578 (695)
T ss_dssp SCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTT
T ss_pred eeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCC
Confidence 1225556553458877522 356999998654
No 333
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=94.46 E-value=2.2 Score=36.96 Aligned_cols=218 Identities=10% Similarity=0.032 Sum_probs=112.4
Q ss_pred CEEEEEEcCCCeeEEeeccCC-C-cccCeEECCCCCEEEEeCC------CcEEEEcC-CC-eEEEcCCc-CCcccEEEcc
Q 018474 73 GWVKYFILHNETLVNWKHIDS-Q-SLLGLTTTKDGGVILCDNE------KGLLKVTE-EG-VEAIVPDA-SFTNDVIAAS 141 (355)
Q Consensus 73 g~i~~~~~~~g~~~~~~~~~~-~-p~~gl~~d~~g~L~v~~~~------~gl~~~~~-~g-~~~~~~~~-~~~~~l~~d~ 141 (355)
..+.++|+.++++........ + -+ +++. -++.||+.... ..+++++. +. .+.+.... ..-..-++.-
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~ 107 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELPSRRCRA-GMVY-MAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL 107 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSC-EEEE-ETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE
T ss_pred CcEEEEcCcCCcEeEcccCCcccccc-eEEE-ECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE
Confidence 458899998888877643221 1 12 2333 36788886421 24788884 55 55554322 1112222223
Q ss_pred CCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeecccc--ccccEEEeCCCCEEEEEeCC-------CC
Q 018474 142 DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFY--FANGIALSKNEDFVVVCESW-------KF 212 (355)
Q Consensus 142 dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~~~--~pngi~~~~dg~~l~v~~~~-------~~ 212 (355)
++.||+...... ......+++||+.+++++.+..... .....+. -++ .+|+..-. .+
T Consensus 108 ~~~iyv~GG~~~------------~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~-~iyv~GG~~~~~~~~~~ 173 (302)
T 2xn4_A 108 NGLLYAVGGFDG------------STGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGV-VGG-LLYAVGGYDVASRQCLS 173 (302)
T ss_dssp TTEEEEEEEECS------------SCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEE-ETT-EEEEECCEETTTTEECC
T ss_pred CCEEEEEcCCCC------------CccCceEEEEeCCCCeEeecCCCCCcccCceEEE-ECC-EEEEEeCCCCCCCcccc
Confidence 678887542100 0112468999999999987643211 1112233 244 47776421 34
Q ss_pred eEEEEEeCCCCCcceeEecccCCCCcC---ceEECCCCCEEEEeecCCchhhHhhhcchhHHHHHHhccchhhcccCCCC
Q 018474 213 RCRRYWLKGDRAGILDAFIENLPGGPD---NINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGS 289 (355)
Q Consensus 213 ~i~~~~~~~~~~~~~~~~~~~~~g~p~---~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (355)
.+++|+++.. +.+... .++. +. .++. -+++||+.......
T Consensus 174 ~~~~yd~~~~---~W~~~~-~~p~-~r~~~~~~~-~~~~iyv~GG~~~~------------------------------- 216 (302)
T 2xn4_A 174 TVECYNATTN---EWTYIA-EMST-RRSGAGVGV-LNNLLYAVGGHDGP------------------------------- 216 (302)
T ss_dssp CEEEEETTTT---EEEEEC-CCSS-CCBSCEEEE-ETTEEEEECCBSSS-------------------------------
T ss_pred EEEEEeCCCC---cEEECC-CCcc-ccccccEEE-ECCEEEEECCCCCC-------------------------------
Confidence 6889987542 233222 2221 11 1222 24678876533110
Q ss_pred CCceEEEEEeCCCCeEEEEEEC-CCCCcccceeEEEEeCCEEEEee-cC----CCeEEEeeCCC
Q 018474 290 DAGARVVKVDGNDGKIIRDFND-PDATYISFVTSAAEFDGNLYLAS-LQ----SNFIGILPLDG 347 (355)
Q Consensus 290 ~~~~~v~~~~~~~g~~~~~~~~-~~g~~~~~~~~~~~~~g~L~v~~-~~----~~~i~~~~~~~ 347 (355)
.....+.+||+++.+. ..+.. +..+ ....++..+++||+.. .. .+.+.+|++.+
T Consensus 217 ~~~~~~~~yd~~~~~W-~~~~~~~~~r---~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~ 276 (302)
T 2xn4_A 217 LVRKSVEVYDPTTNAW-RQVADMNMCR---RNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPTT 276 (302)
T ss_dssp SBCCCEEEEETTTTEE-EEECCCSSCC---BSCEEEEETTEEEEECCBCSSSBCCCEEEEETTT
T ss_pred cccceEEEEeCCCCCE-eeCCCCCCcc---ccCeEEEECCEEEEECCcCCCcccccEEEEcCCC
Confidence 1113589999944554 44432 3222 2334556688888843 22 24467776553
No 334
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=93.65 E-value=3.4 Score=36.10 Aligned_cols=132 Identities=12% Similarity=0.093 Sum_probs=71.9
Q ss_pred EEEEEcCCCeeEEeeccCC-C-cccCeEECCCCCEEEEeCC---------CcEEEEcC-CC-eEEEcCCc-CCcccEEEc
Q 018474 75 VKYFILHNETLVNWKHIDS-Q-SLLGLTTTKDGGVILCDNE---------KGLLKVTE-EG-VEAIVPDA-SFTNDVIAA 140 (355)
Q Consensus 75 i~~~~~~~g~~~~~~~~~~-~-p~~gl~~d~~g~L~v~~~~---------~gl~~~~~-~g-~~~~~~~~-~~~~~l~~d 140 (355)
++++|+.+++++....... + -+ +++. -+++||+.... ..+++++. ++ -+.+.... ..-..-++.
T Consensus 69 ~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~ 146 (315)
T 4asc_A 69 FLQFDHLDSEWLGMPPLPSPRCLF-GLGE-ALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS 146 (315)
T ss_dssp EEEEETTTTEEEECCCBSSCEESC-EEEE-ETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE
T ss_pred eEEecCCCCeEEECCCCCcchhce-eEEE-ECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE
Confidence 7899999999877643221 1 12 2333 36789886431 23788884 55 55544322 222222333
Q ss_pred cCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeecccc--ccccEEEeCCCCEEEEEeCC-----CCe
Q 018474 141 SDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFY--FANGIALSKNEDFVVVCESW-----KFR 213 (355)
Q Consensus 141 ~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~~~--~pngi~~~~dg~~l~v~~~~-----~~~ 213 (355)
-++.||+...... .......+++||+.+.+++.+..... .-...+. -+++ +|+..-. .+.
T Consensus 147 ~~~~iyv~GG~~~-----------~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~-iyv~GG~~~~~~~~~ 213 (315)
T 4asc_A 147 HMDLVYVIGGKGS-----------DRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATV-HDGR-IIVAAGVTDTGLTSS 213 (315)
T ss_dssp ETTEEEEECCBCT-----------TSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTE-EEEEEEECSSSEEEE
T ss_pred ECCEEEEEeCCCC-----------CCcccceEEEEeCCCCeEEECCCCCCchhceEEEE-ECCE-EEEEeccCCCCccce
Confidence 5678888643200 01223469999999999987653211 1112333 3444 6666421 135
Q ss_pred EEEEEeCC
Q 018474 214 CRRYWLKG 221 (355)
Q Consensus 214 i~~~~~~~ 221 (355)
+++|+++.
T Consensus 214 ~~~yd~~~ 221 (315)
T 4asc_A 214 AEVYSITD 221 (315)
T ss_dssp EEEEETTT
T ss_pred EEEEECCC
Confidence 88888754
No 335
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=93.60 E-value=3.2 Score=35.80 Aligned_cols=219 Identities=8% Similarity=0.013 Sum_probs=112.7
Q ss_pred CEEEEEEcCCCeeEEeeccCC-Cc-ccCeEECCCCCEEEEeCC------CcEEEEcC-CC----eEEEcCCc-CCcccEE
Q 018474 73 GWVKYFILHNETLVNWKHIDS-QS-LLGLTTTKDGGVILCDNE------KGLLKVTE-EG----VEAIVPDA-SFTNDVI 138 (355)
Q Consensus 73 g~i~~~~~~~g~~~~~~~~~~-~p-~~gl~~d~~g~L~v~~~~------~gl~~~~~-~g----~~~~~~~~-~~~~~l~ 138 (355)
..++++|+.++++........ +. + +++. -++.||+.... ..+++++. ++ .+.+.... ..-...+
T Consensus 31 ~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~ 108 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLPSITRKRRYV-ASVS-LHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGA 108 (301)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSC-EEEE-ETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEE
T ss_pred eEEEEEcCCCCeEEeCCCCChhhccc-cEEE-ECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeE
Confidence 468999999998887653221 11 2 2222 36788886431 24788883 22 34443322 1122222
Q ss_pred EccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeecccc--ccccEEEeCCCCEEEEEeC-----CC
Q 018474 139 AASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFY--FANGIALSKNEDFVVVCES-----WK 211 (355)
Q Consensus 139 ~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~~~--~pngi~~~~dg~~l~v~~~-----~~ 211 (355)
+.-++.||+...... ......+++||+.+++++.+..... .....+. -+++ +|+..- ..
T Consensus 109 ~~~~~~lyv~GG~~~------------~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~-iyv~GG~~~~~~~ 174 (301)
T 2vpj_A 109 TTLGDMIYVSGGFDG------------SRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVV-ASGV-IYCLGGYDGLNIL 174 (301)
T ss_dssp EEETTEEEEECCBCS------------SCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEE-ETTE-EEEECCBCSSCBC
T ss_pred EEECCEEEEEcccCC------------CcccceEEEEcCCCCeEEECCCCCCCcccceEEE-ECCE-EEEECCCCCCccc
Confidence 223678998643210 0113479999999999887653211 1122233 3554 777642 13
Q ss_pred CeEEEEEeCCCCCcceeEecccCCCCcC---ceEECCCCCEEEEeecCCchhhHhhhcchhHHHHHHhccchhhcccCCC
Q 018474 212 FRCRRYWLKGDRAGILDAFIENLPGGPD---NINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMG 288 (355)
Q Consensus 212 ~~i~~~~~~~~~~~~~~~~~~~~~g~p~---~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (355)
+.+++|+++.. +.+... .++. |. .++. -++++|+.......
T Consensus 175 ~~~~~~d~~~~---~W~~~~-~~p~-~r~~~~~~~-~~~~i~v~GG~~~~------------------------------ 218 (301)
T 2vpj_A 175 NSVEKYDPHTG---HWTNVT-PMAT-KRSGAGVAL-LNDHIYVVGGFDGT------------------------------ 218 (301)
T ss_dssp CCEEEEETTTT---EEEEEC-CCSS-CCBSCEEEE-ETTEEEEECCBCSS------------------------------
T ss_pred ceEEEEeCCCC---cEEeCC-CCCc-ccccceEEE-ECCEEEEEeCCCCC------------------------------
Confidence 56889997543 333222 2221 11 1222 24678876543211
Q ss_pred CCCceEEEEEeCCCCeEEEEEECCCCCcccceeEEEEeCCEEEEee-cCC----CeEEEeeCCC
Q 018474 289 SDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFDGNLYLAS-LQS----NFIGILPLDG 347 (355)
Q Consensus 289 ~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~-~~~----~~i~~~~~~~ 347 (355)
.....+.+||+++.+....-..+..+ ....++..+++||+.. ... +.+.+|++.+
T Consensus 219 -~~~~~v~~yd~~~~~W~~~~~~p~~r---~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~ 278 (301)
T 2vpj_A 219 -AHLSSVEAYNIRTDSWTTVTSMTTPR---CYVGATVLRGRLYAIAGYDGNSLLSSIECYDPII 278 (301)
T ss_dssp -SBCCCEEEEETTTTEEEEECCCSSCC---BSCEEEEETTEEEEECCBCSSSBEEEEEEEETTT
T ss_pred -cccceEEEEeCCCCcEEECCCCCCcc---cceeEEEECCEEEEEcCcCCCcccccEEEEcCCC
Confidence 11135899999455544332223332 2234555688888843 322 4566666654
No 336
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=93.52 E-value=3.4 Score=35.70 Aligned_cols=143 Identities=13% Similarity=0.110 Sum_probs=77.6
Q ss_pred CCeEEEE-ec-----CCEEEEEEcCCCe---eEEeeccC-CC-cccCeEECCCCCEEEEeCC------CcEEEEcC-CC-
Q 018474 63 KGALYTA-TR-----DGWVKYFILHNET---LVNWKHID-SQ-SLLGLTTTKDGGVILCDNE------KGLLKVTE-EG- 123 (355)
Q Consensus 63 ~g~l~~~-~~-----~g~i~~~~~~~g~---~~~~~~~~-~~-p~~gl~~d~~g~L~v~~~~------~gl~~~~~-~g- 123 (355)
++.+|+- .. ...++++|+.+++ ++...... .+ -+ +++. -++.||+.... ..+.+++. +.
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~-~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~~~~ 139 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLA-GATT-LGDMIYVSGGFDGSRRHTSMERYDPNIDQ 139 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSC-EEEE-ETTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccce-eEEE-ECCEEEEEcccCCCcccceEEEEcCCCCe
Confidence 5567763 22 2468999998888 77764322 11 12 2333 36789987431 24788884 55
Q ss_pred eEEEcCCc-CCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeecccc--ccccEEEeCC
Q 018474 124 VEAIVPDA-SFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFY--FANGIALSKN 200 (355)
Q Consensus 124 ~~~~~~~~-~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~~~--~pngi~~~~d 200 (355)
.+.+.... ..-..-++.-++.||+...... ......+++||+.+++++.+..... ....++. -+
T Consensus 140 W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~------------~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~ 206 (301)
T 2vpj_A 140 WSMLGDMQTAREGAGLVVASGVIYCLGGYDG------------LNILNSVEKYDPHTGHWTNVTPMATKRSGAGVAL-LN 206 (301)
T ss_dssp EEEEEECSSCCBSCEEEEETTEEEEECCBCS------------SCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ET
T ss_pred EEECCCCCCCcccceEEEECCEEEEECCCCC------------CcccceEEEEeCCCCcEEeCCCCCcccccceEEE-EC
Confidence 44443321 1112222223788998643210 0123469999999999987642211 1112222 24
Q ss_pred CCEEEEEeCC-----CCeEEEEEeCC
Q 018474 201 EDFVVVCESW-----KFRCRRYWLKG 221 (355)
Q Consensus 201 g~~l~v~~~~-----~~~i~~~~~~~ 221 (355)
+ .+|+..-. .+.+++|+++.
T Consensus 207 ~-~i~v~GG~~~~~~~~~v~~yd~~~ 231 (301)
T 2vpj_A 207 D-HIYVVGGFDGTAHLSSVEAYNIRT 231 (301)
T ss_dssp T-EEEEECCBCSSSBCCCEEEEETTT
T ss_pred C-EEEEEeCCCCCcccceEEEEeCCC
Confidence 4 47776532 35689999754
No 337
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=93.25 E-value=3.7 Score=35.45 Aligned_cols=145 Identities=11% Similarity=0.074 Sum_probs=78.0
Q ss_pred CCeEEEE-ec-----CCEEEEEEcCCCeeEEeeccCC-C-cccCeEECCCCCEEEEeCC------CcEEEEcC-CC-eEE
Q 018474 63 KGALYTA-TR-----DGWVKYFILHNETLVNWKHIDS-Q-SLLGLTTTKDGGVILCDNE------KGLLKVTE-EG-VEA 126 (355)
Q Consensus 63 ~g~l~~~-~~-----~g~i~~~~~~~g~~~~~~~~~~-~-p~~gl~~d~~g~L~v~~~~------~gl~~~~~-~g-~~~ 126 (355)
++.+|+- .. ...++++|+.+++++....... + -+ +++. -+++||+.... ..+.+++. +. .+.
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~ 138 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTL-GAAV-LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFH 138 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSC-EEEE-ETTEEEEEEEECSSCEEEEEEEEETTTTEEEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccce-EEEE-ECCEEEEEcCCCCCccCceEEEEeCCCCeEee
Confidence 5667763 21 2458999999999887754321 1 12 2333 36788885421 13677884 55 555
Q ss_pred EcCCc-CCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeecccc--ccccEEEeCCCCE
Q 018474 127 IVPDA-SFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFY--FANGIALSKNEDF 203 (355)
Q Consensus 127 ~~~~~-~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~~~--~pngi~~~~dg~~ 203 (355)
+.... ..-..-++.-++.||+...... . .......+++||+.+++++.+..... ....++. -++ .
T Consensus 139 ~~~~p~~r~~~~~~~~~~~iyv~GG~~~-----~-----~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~-~ 206 (302)
T 2xn4_A 139 VAPMNTRRSSVGVGVVGGLLYAVGGYDV-----A-----SRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGV-LNN-L 206 (302)
T ss_dssp ECCCSSCCBSCEEEEETTEEEEECCEET-----T-----TTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETT-E
T ss_pred cCCCCCcccCceEEEECCEEEEEeCCCC-----C-----CCccccEEEEEeCCCCcEEECCCCccccccccEEE-ECC-E
Confidence 44322 1111222224678998643200 0 00113469999999999987643211 1112233 244 4
Q ss_pred EEEEeCC-----CCeEEEEEeCC
Q 018474 204 VVVCESW-----KFRCRRYWLKG 221 (355)
Q Consensus 204 l~v~~~~-----~~~i~~~~~~~ 221 (355)
+|+..-. .+.+++|+++.
T Consensus 207 iyv~GG~~~~~~~~~~~~yd~~~ 229 (302)
T 2xn4_A 207 LYAVGGHDGPLVRKSVEVYDPTT 229 (302)
T ss_dssp EEEECCBSSSSBCCCEEEEETTT
T ss_pred EEEECCCCCCcccceEEEEeCCC
Confidence 7777522 34688999754
No 338
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=93.22 E-value=4 Score=35.66 Aligned_cols=207 Identities=12% Similarity=0.053 Sum_probs=104.3
Q ss_pred EEEEEEcCCCeeEEeeccC--CCcccCeEECCCCCEEEEeCC----C--------cEEEEcC-CC-eEEEcCCc-CCccc
Q 018474 74 WVKYFILHNETLVNWKHID--SQSLLGLTTTKDGGVILCDNE----K--------GLLKVTE-EG-VEAIVPDA-SFTND 136 (355)
Q Consensus 74 ~i~~~~~~~g~~~~~~~~~--~~p~~gl~~d~~g~L~v~~~~----~--------gl~~~~~-~g-~~~~~~~~-~~~~~ 136 (355)
.+.++|+.++++....... .+.. .-+.-.++.||+.... . .+++++. ++ .+.+.... ..-..
T Consensus 25 ~~~~yd~~~~~W~~~~~~~~~~r~~-~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~ 103 (318)
T 2woz_A 25 AAVAYDPMENECYLTALAEQIPRNH-SSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLF 103 (318)
T ss_dssp EEEEEETTTTEEEEEEECTTSCSSE-EEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSC
T ss_pred ceEEECCCCCceecccCCccCCccc-eEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCcccccc
Confidence 4789999999887632221 1211 1223357889886531 0 1677884 55 55543322 11112
Q ss_pred EEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeeccc--cccccEEEeCCCCEEEEEeCC----
Q 018474 137 VIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGF--YFANGIALSKNEDFVVVCESW---- 210 (355)
Q Consensus 137 l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~~--~~pngi~~~~dg~~l~v~~~~---- 210 (355)
-+..-++.||+....... .......+++||+.+++++.+.... ......+. .+++ +|+..-.
T Consensus 104 ~~~~~~~~iyv~GG~~~~----------~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~-iyv~GG~~~~~ 171 (318)
T 2woz_A 104 GLGEVDDKIYVVAGKDLQ----------TEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS-HNGM-IYCLGGKTDDK 171 (318)
T ss_dssp EEEEETTEEEEEEEEBTT----------TCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE-ETTE-EEEECCEESSS
T ss_pred ceEEECCEEEEEcCccCC----------CCcccceEEEEeCCCCCEeECCCCCCcccccEEEE-ECCE-EEEEcCCCCCC
Confidence 222236788876432000 0011346899999999998764321 11122333 4454 7776421
Q ss_pred --CCeEEEEEeCCCCCcceeEecccCCCCcC---ceEECCCCCEEEEeecCCchhhHhhhcchhHHHHHHhccchhhccc
Q 018474 211 --KFRCRRYWLKGDRAGILDAFIENLPGGPD---NINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLL 285 (355)
Q Consensus 211 --~~~i~~~~~~~~~~~~~~~~~~~~~g~p~---~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (355)
.+.+++|+++.. +.+... ..+. |. ..+. -+|+|||.......
T Consensus 172 ~~~~~~~~yd~~~~---~W~~~~-~~p~-~r~~~~~~~-~~~~iyv~GG~~~~--------------------------- 218 (318)
T 2woz_A 172 KCTNRVFIYNPKKG---DWKDLA-PMKT-PRSMFGVAI-HKGKIVIAGGVTED--------------------------- 218 (318)
T ss_dssp CBCCCEEEEETTTT---EEEEEC-CCSS-CCBSCEEEE-ETTEEEEEEEEETT---------------------------
T ss_pred CccceEEEEcCCCC---EEEECC-CCCC-CcccceEEE-ECCEEEEEcCcCCC---------------------------
Confidence 345899997542 233222 2221 22 2222 24678876543110
Q ss_pred CCCCCCceEEEEEeCCCCeEEEEEECCCCCcccceeEEEEeCCEEEEe
Q 018474 286 PMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFDGNLYLA 333 (355)
Q Consensus 286 ~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~ 333 (355)
.....+.+||+++.+....-.-|..+ ....++..+++||+-
T Consensus 219 ----~~~~~~~~yd~~~~~W~~~~~~p~~r---~~~~~~~~~~~i~v~ 259 (318)
T 2woz_A 219 ----GLSASVEAFDLKTNKWEVMTEFPQER---SSISLVSLAGSLYAI 259 (318)
T ss_dssp ----EEEEEEEEEETTTCCEEECCCCSSCC---BSCEEEEETTEEEEE
T ss_pred ----CccceEEEEECCCCeEEECCCCCCcc---cceEEEEECCEEEEE
Confidence 01146889999555544332223322 233456678898884
No 339
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=92.52 E-value=9.5 Score=38.21 Aligned_cols=100 Identities=8% Similarity=0.025 Sum_probs=61.7
Q ss_pred CCCCCCceEEEeeCC-CeEEEEecCCEEEEEEcCCCeeEEeeccC------------CCcccCeEECC--CCCEEEEeC-
Q 018474 49 GCVNHPEDVSVVVSK-GALYTATRDGWVKYFILHNETLVNWKHID------------SQSLLGLTTTK--DGGVILCDN- 112 (355)
Q Consensus 49 ~~~~~p~~i~~d~~~-g~l~~~~~~g~i~~~~~~~g~~~~~~~~~------------~~p~~gl~~d~--~g~L~v~~~- 112 (355)
|....-.+|+++|.+ +.+|+++..|+|++-.-....++...... .... .|++|+ .+++|++..
T Consensus 18 g~~g~i~~i~~~p~~~~~~y~~~~~ggv~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~-~ia~dp~~~~~~~~~~g~ 96 (763)
T 3a0f_A 18 SGGGFISGLVAHPTEKDLIYARTDIGGTYRWNAAKWEWEPITDFIINNALAGNGANLLGTE-SIALDPHNPDRLYLAQGD 96 (763)
T ss_dssp CBCSCEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCBTTCSSSCCCCCCSEE-EEECCTTCTTCEEEEECS
T ss_pred cCCCceeEEEeCCCCCCEEEEEeccCcEEEECCCCCCeeECccCccccccCCCccccccee-EEEECCCCCCEEEEEecc
Confidence 334567788998755 67999988888998876445677654311 1245 677886 368999864
Q ss_pred ------CCcEEEEcCCC--eEEEcCCc---------CCcccEEEccC--CcEEEEe
Q 018474 113 ------EKGLLKVTEEG--VEAIVPDA---------SFTNDVIAASD--GTLYFTV 149 (355)
Q Consensus 113 ------~~gl~~~~~~g--~~~~~~~~---------~~~~~l~~d~d--G~ly~~d 149 (355)
..+|++=...| -+.+.... .....+++++. +.+|+..
T Consensus 97 ~~~~~~~~~i~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~ 152 (763)
T 3a0f_A 97 YVQWDPWAAFLVSDDRGKTFKQYRSPVPMGANDMGRNGGERLAVNPHWTDELWFGS 152 (763)
T ss_dssp CTTTCSCCEEEEESSTTSSCEEEECSSCCCTTSTTTTSBCCEEECTTSTTCEEEEC
T ss_pred cccCCCCceEEEECCCCCCceeccCCcccCccccCccccceEEECCCCCCEEEEEe
Confidence 24565554444 44433211 01146888864 5788863
No 340
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=92.42 E-value=5.5 Score=35.30 Aligned_cols=152 Identities=9% Similarity=0.043 Sum_probs=77.8
Q ss_pred CCeEEEEe--cCCEEEEEEcCC--CeeEEeeccC--CCc-ccCeEECCCCCEEEEeCC-----------CcEEEEcC-CC
Q 018474 63 KGALYTAT--RDGWVKYFILHN--ETLVNWKHID--SQS-LLGLTTTKDGGVILCDNE-----------KGLLKVTE-EG 123 (355)
Q Consensus 63 ~g~l~~~~--~~g~i~~~~~~~--g~~~~~~~~~--~~p-~~gl~~d~~g~L~v~~~~-----------~gl~~~~~-~g 123 (355)
++.+|+.. ....++++|+.+ .+++...... .+. + +++. -+++|||.... ..++++|. +.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~-~~~~-~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~ 96 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQA-TSAF-IDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN 96 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSC-EEEE-ETTEEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccc-eEEE-ECCEEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence 66788742 345799999963 7777664432 121 2 2333 36789985322 24788884 55
Q ss_pred -eEEEcCCc---CCcccEEEccCCcEEEEeCCCCCCCcccc----------------------ccccccCCCCeEEEEeC
Q 018474 124 -VEAIVPDA---SFTNDVIAASDGTLYFTVASTKYTPTDFY----------------------KDMAEGKPYGQLRKYDP 177 (355)
Q Consensus 124 -~~~~~~~~---~~~~~l~~d~dG~ly~~d~~~~~~~~~~~----------------------~~~~~~~~~g~l~~~dp 177 (355)
-+.+.... ..-..+++ -++.||+............. ...........+++||+
T Consensus 97 ~W~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~ 175 (357)
T 2uvk_A 97 SWVKLMSHAPMGMAGHVTFV-HNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDP 175 (357)
T ss_dssp EEEECSCCCSSCCSSEEEEE-ETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEET
T ss_pred cEEECCCCCCcccccceEEE-ECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeC
Confidence 44443321 11122333 67889986542100000000 00000012357999999
Q ss_pred CCCeEEEeecccc--cc-ccEEEeCCCCEEEEEeC------CCCeEEEEEe
Q 018474 178 KLKETTVLHEGFY--FA-NGIALSKNEDFVVVCES------WKFRCRRYWL 219 (355)
Q Consensus 178 ~~~~~~~~~~~~~--~p-ngi~~~~dg~~l~v~~~------~~~~i~~~~~ 219 (355)
.+.+++.+..... .. .+++.. ++ .+|+..- ....+++|++
T Consensus 176 ~~~~W~~~~~~p~~~~~~~~~~~~-~~-~iyv~GG~~~~~~~~~~v~~~d~ 224 (357)
T 2uvk_A 176 STQQWSYAGESPWYGTAGAAVVNK-GD-KTWLINGEAKPGLRTDAVFELDF 224 (357)
T ss_dssp TTTEEEEEEECSSCCCBSCEEEEE-TT-EEEEECCEEETTEECCCEEEEEC
T ss_pred CCCcEEECCCCCCCCcccccEEEE-CC-EEEEEeeecCCCcccCceEEEEe
Confidence 9999987753321 11 223332 33 4777642 1346778876
No 341
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=92.11 E-value=5.4 Score=34.47 Aligned_cols=147 Identities=11% Similarity=0.072 Sum_probs=79.4
Q ss_pred CCeEEEE-e----cCCEEEEEEcCCCeeEEeeccCC-C-cccCeEECCCCCEEEEeCC-------CcEEEEcC-CC-eEE
Q 018474 63 KGALYTA-T----RDGWVKYFILHNETLVNWKHIDS-Q-SLLGLTTTKDGGVILCDNE-------KGLLKVTE-EG-VEA 126 (355)
Q Consensus 63 ~g~l~~~-~----~~g~i~~~~~~~g~~~~~~~~~~-~-p~~gl~~d~~g~L~v~~~~-------~gl~~~~~-~g-~~~ 126 (355)
++.+|+- . ....++++|+.+++++....... + -+ +++. -+++||+.... ..+++++. +. .+.
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~ 132 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSL-AACA-AEGKIYTSGGSEVGNSALYLFECYDTRTESWHT 132 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSC-EEEE-ETTEEEEECCBBTTBSCCCCEEEEETTTTEEEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccce-eEEE-ECCEEEEECCCCCCCcEeeeEEEEeCCCCceEe
Confidence 5567763 2 23678999999999887754321 1 12 2222 36789886421 24788884 55 555
Q ss_pred EcCCc-CCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeecccc--ccccEEEeCCCCE
Q 018474 127 IVPDA-SFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFY--FANGIALSKNEDF 203 (355)
Q Consensus 127 ~~~~~-~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~~~--~pngi~~~~dg~~ 203 (355)
+.... ..-..-++.-++.||+........ . .+.....+++||+.+++++.+..... ....++.. ++ .
T Consensus 133 ~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~---~-----~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~ 202 (306)
T 3ii7_A 133 KPSMLTQRCSHGMVEANGLIYVCGGSLGNN---V-----SGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV-KD-K 202 (306)
T ss_dssp ECCCSSCCBSCEEEEETTEEEEECCEESCT---T-----TCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TT-E
T ss_pred CCCCcCCcceeEEEEECCEEEEECCCCCCC---C-----cccccceEEEeCCCCCeEEECCCccchhhcceEEEE-CC-E
Confidence 54322 112222233477899864320000 0 00013469999999999987753211 11223333 44 4
Q ss_pred EEEEeCC-----CCeEEEEEeCC
Q 018474 204 VVVCESW-----KFRCRRYWLKG 221 (355)
Q Consensus 204 l~v~~~~-----~~~i~~~~~~~ 221 (355)
+|+..-. .+.+++|+++.
T Consensus 203 i~v~GG~~~~~~~~~~~~yd~~~ 225 (306)
T 3ii7_A 203 IFAVGGQNGLGGLDNVEYYDIKL 225 (306)
T ss_dssp EEEECCEETTEEBCCEEEEETTT
T ss_pred EEEEeCCCCCCCCceEEEeeCCC
Confidence 7776421 24688898754
No 342
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=91.52 E-value=6.4 Score=34.13 Aligned_cols=132 Identities=10% Similarity=0.124 Sum_probs=73.3
Q ss_pred CEEEEEEcCCCeeEEeeccC-CCc-ccCeEECCCCCEEEEeC------CCcEEEEcC-CC-eEEEcCCc--CCcccEEEc
Q 018474 73 GWVKYFILHNETLVNWKHID-SQS-LLGLTTTKDGGVILCDN------EKGLLKVTE-EG-VEAIVPDA--SFTNDVIAA 140 (355)
Q Consensus 73 g~i~~~~~~~g~~~~~~~~~-~~p-~~gl~~d~~g~L~v~~~------~~gl~~~~~-~g-~~~~~~~~--~~~~~l~~d 140 (355)
..++++|+.+++++...... .+. + +++. -+++||+... ...+.+++. +. .+.+.... ..-...++
T Consensus 90 ~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~- 166 (308)
T 1zgk_A 90 SALDCYNPMTNQWSPCAPMSVPRNRI-GVGV-IDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAV- 166 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBTC-EEEE-ETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEE-
T ss_pred ceEEEECCCCCeEeECCCCCcCcccc-EEEE-ECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEE-
Confidence 45889999999888764322 121 2 2232 3678998642 134788884 55 55543322 11222222
Q ss_pred cCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeeccc--cccccEEEeCCCCEEEEEeCC-----CCe
Q 018474 141 SDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGF--YFANGIALSKNEDFVVVCESW-----KFR 213 (355)
Q Consensus 141 ~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~~--~~pngi~~~~dg~~l~v~~~~-----~~~ 213 (355)
-++.||+...... ......+++||+.+.+++.+.... .....++.. ++ .+|+..-. .+.
T Consensus 167 ~~~~iyv~GG~~~------------~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~ 232 (308)
T 1zgk_A 167 LNRLLYAVGGFDG------------TNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL-HN-CIYAAGGYDGQDQLNS 232 (308)
T ss_dssp ETTEEEEECCBCS------------SCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TT-EEEEECCBCSSSBCCC
T ss_pred ECCEEEEEeCCCC------------CCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE-CC-EEEEEeCCCCCCccce
Confidence 3678888643210 011346999999999988764321 111223333 44 47776522 356
Q ss_pred EEEEEeCC
Q 018474 214 CRRYWLKG 221 (355)
Q Consensus 214 i~~~~~~~ 221 (355)
+++|+++.
T Consensus 233 v~~yd~~~ 240 (308)
T 1zgk_A 233 VERYDVET 240 (308)
T ss_dssp EEEEETTT
T ss_pred EEEEeCCC
Confidence 89999854
No 343
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=90.94 E-value=9.2 Score=34.89 Aligned_cols=142 Identities=13% Similarity=0.105 Sum_probs=79.4
Q ss_pred CCCCceEEEeeCCCeEEEEecCCEEEEEEcCCCe---------eEE--eeccCCCcccCeEECCCCCEEEEeCCCcEEEE
Q 018474 51 VNHPEDVSVVVSKGALYTATRDGWVKYFILHNET---------LVN--WKHIDSQSLLGLTTTKDGGVILCDNEKGLLKV 119 (355)
Q Consensus 51 ~~~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~---------~~~--~~~~~~~p~~gl~~d~~g~L~v~~~~~gl~~~ 119 (355)
+.....+++.+..|.++++..++ +..++.++.+ ++. ...... +. .+++ .+..|+++ ..+++..+
T Consensus 37 ~~~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~-~l~f-d~~~L~v~-~~~~l~v~ 111 (388)
T 1xip_A 37 FASLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIPD-VI-FVCF-HGDQVLVS-TRNALYSL 111 (388)
T ss_dssp SSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EE-EEEE-ETTEEEEE-ESSEEEEE
T ss_pred cccccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEeeCCC-ee-EEEE-CCCEEEEE-cCCcEEEE
Confidence 34567888997778888887765 5557642221 111 112234 77 8999 34457888 45567777
Q ss_pred c-CCC--eEEEcCCcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeeccccccccEE
Q 018474 120 T-EEG--VEAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYFANGIA 196 (355)
Q Consensus 120 ~-~~g--~~~~~~~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~~~~~pngi~ 196 (355)
+ .+- ..........++++..-+. ++.+. +..|.|+.+|.++++...+.. ....++
T Consensus 112 dv~sl~~~~~~~~~~~~v~~i~~~~p-~~av~------------------~~dG~L~v~dl~~~~~~~~~~---~Vs~v~ 169 (388)
T 1xip_A 112 DLEELSEFRTVTSFEKPVFQLKNVNN-TLVIL------------------NSVNDLSALDLRTKSTKQLAQ---NVTSFD 169 (388)
T ss_dssp ESSSTTCEEEEEECSSCEEEEEECSS-EEEEE------------------ETTSEEEEEETTTCCEEEEEE---SEEEEE
T ss_pred EchhhhccCccceeecceeeEEecCC-CEEEE------------------ECCCCEEEEEccCCccccccC---CceEEE
Confidence 6 221 2211111112333332221 22222 235788888887666544332 345789
Q ss_pred EeCCCCEEEEEeCCCCeEEEEEeCCC
Q 018474 197 LSKNEDFVVVCESWKFRCRRYWLKGD 222 (355)
Q Consensus 197 ~~~dg~~l~v~~~~~~~i~~~~~~~~ 222 (355)
++|+| +.+. ...+.+..|++++.
T Consensus 170 WSpkG--~~vg-~~dg~i~~~~~~~~ 192 (388)
T 1xip_A 170 VTNSQ--LAVL-LKDRSFQSFAWRNG 192 (388)
T ss_dssp ECSSE--EEEE-ETTSCEEEEEEETT
T ss_pred EcCCc--eEEE-EcCCcEEEEcCCCc
Confidence 99999 3333 34578888887654
No 344
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=90.53 E-value=1 Score=40.44 Aligned_cols=105 Identities=8% Similarity=0.070 Sum_probs=59.5
Q ss_pred CCeEEEEecCCEEEEEEcCCCeeEEeeccC--CCcccCeE---ECCCCCEEEEe--CCCcEEEEcC-CCeEEEcCCc---
Q 018474 63 KGALYTATRDGWVKYFILHNETLVNWKHID--SQSLLGLT---TTKDGGVILCD--NEKGLLKVTE-EGVEAIVPDA--- 131 (355)
Q Consensus 63 ~g~l~~~~~~g~i~~~~~~~g~~~~~~~~~--~~p~~gl~---~d~~g~L~v~~--~~~gl~~~~~-~g~~~~~~~~--- 131 (355)
++.+|+++.+|.|+.+|.++|+..--.... ..+. ... ...+|.+|+.. ..+.|+.++. +|.+.+....
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~-~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~l 88 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLI-EIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQL 88 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSE-ECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHH
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcE-EecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccc
Confidence 568999999999999999999754222221 1111 110 01245677764 3456888884 6622221111
Q ss_pred --CCccc----EEE------ccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEee
Q 018474 132 --SFTND----VIA------ASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH 186 (355)
Q Consensus 132 --~~~~~----l~~------d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~ 186 (355)
..|.. .++ +.+|.+|++. ..|.++.+|..+|+.....
T Consensus 89 v~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs------------------~~g~l~ald~~tG~~~W~~ 137 (339)
T 2be1_A 89 VSTSPLHLKTNIVVNDSGKIVEDEKVYTGS------------------MRTIMYTINMLNGEIISAF 137 (339)
T ss_dssp HTTCSEEEECC----------CCEEEEECE------------------EEEEEEEEETTTCCEEEEE
T ss_pred eeccccccCCCceeecccccccCCEEEEEe------------------cCCEEEEEECCCCcEEEEE
Confidence 11111 112 2466777753 3568999999999876543
No 345
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=89.12 E-value=19 Score=35.81 Aligned_cols=112 Identities=6% Similarity=0.046 Sum_probs=61.0
Q ss_pred CeEEC-CCCC-E-EEEeCCC----cEEEEcC-CCeEEEcCCc-CCcccEEEccCC-cEEEEeCCCCCCCccccccccccC
Q 018474 98 GLTTT-KDGG-V-ILCDNEK----GLLKVTE-EGVEAIVPDA-SFTNDVIAASDG-TLYFTVASTKYTPTDFYKDMAEGK 167 (355)
Q Consensus 98 gl~~d-~~g~-L-~v~~~~~----gl~~~~~-~g~~~~~~~~-~~~~~l~~d~dG-~ly~~d~~~~~~~~~~~~~~~~~~ 167 (355)
+..+. +||+ | |..+..+ .|+.++. +|.+.+.... ....+++.++|| .|+++.... ..
T Consensus 178 ~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~~~~~~~WspDg~~l~y~~~d~-------------~~ 244 (751)
T 2xe4_A 178 EVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSGTNGEIVWGPDHTSLFYVTKDE-------------TL 244 (751)
T ss_dssp EEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEEECSCCEECSSTTEEEEEEECT-------------TC
T ss_pred eeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccCceeeEEEecCCCEEEEEEECC-------------CC
Confidence 56788 8997 3 3333221 2777773 3311111111 223567889998 577663220 00
Q ss_pred CCCeEEEEeCCCCe---EEEee-ccccccccEEEeCCCCEEEEEeCC--CCeEEEEEeCCC
Q 018474 168 PYGQLRKYDPKLKE---TTVLH-EGFYFANGIALSKNEDFVVVCESW--KFRCRRYWLKGD 222 (355)
Q Consensus 168 ~~g~l~~~dp~~~~---~~~~~-~~~~~pngi~~~~dg~~l~v~~~~--~~~i~~~~~~~~ 222 (355)
....|++++..+++ ...+. ....+-.++.++|||+.|+++... ...|+.+++++.
T Consensus 245 ~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 245 RENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKG 305 (751)
T ss_dssp CEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSC
T ss_pred CCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence 01257888776653 12222 111223467899999988877632 456888887653
No 346
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=88.33 E-value=9 Score=38.16 Aligned_cols=146 Identities=19% Similarity=0.227 Sum_probs=81.6
Q ss_pred ceEEEeeCC-CeEEEEecC-CEEEEEEcCCCeeEEeeccCC--------------C---cccCeEECCC--------CCE
Q 018474 55 EDVSVVVSK-GALYTATRD-GWVKYFILHNETLVNWKHIDS--------------Q---SLLGLTTTKD--------GGV 107 (355)
Q Consensus 55 ~~i~~d~~~-g~l~~~~~~-g~i~~~~~~~g~~~~~~~~~~--------------~---p~~gl~~d~~--------g~L 107 (355)
+.|+++|.+ +.+|+++.. ..|++-.-....++....... . .. .+.+|+. +++
T Consensus 135 ~~l~~~p~~~~~v~~g~~~g~gl~~S~DgG~tW~~~~~~~~~~~~~~~p~~~~~~~~~g~~-~v~~dp~~~~~~~~~~~v 213 (737)
T 2cn3_A 135 ERLAIDPNDNRILYLGTRCGNGLWRSTDYGVTWSKVESFPNPGTYIYDPNFDYTKDIIGVV-WVVFDKSSSTPGNPTKTI 213 (737)
T ss_dssp CCEEECSSCTTCEEEECSTTCCEEEESSTTSSCEECTTCCCCCCCBSCTTSTTTCSBCCEE-EEEECGGGSCTTSCCSCE
T ss_pred ceEEECCCCCCEEEEeeccCCcEEEeCCCCcceecccCCCCCcccccCcccccccCCCCEE-EEEcCCCCcccCCCCCEE
Confidence 689998654 789998743 557654332224554431100 0 12 2667653 389
Q ss_pred EEEeCCC--cEEEEcCCC--eEEEcCCc--CCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCe
Q 018474 108 ILCDNEK--GLLKVTEEG--VEAIVPDA--SFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKE 181 (355)
Q Consensus 108 ~v~~~~~--gl~~~~~~g--~~~~~~~~--~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~ 181 (355)
|++.... ++++=...| .+.+.... ..+..+++++++.+|++..... ....+...+.+++.+..++.
T Consensus 214 ~~~~~~~~~~v~~S~DgG~tW~~~~~~p~~~~~~~~~~~~~~~l~~~~~d~~--------g~y~~~~~g~v~~s~d~G~t 285 (737)
T 2cn3_A 214 YVGVADKNESIYRSTDGGVTWKAVPGQPKGLLPHHGVLASNGMLYITYGDTC--------GPYDGNGKGQVWKFNTRTGE 285 (737)
T ss_dssp EEEESCSSCCEEEESSTTSCCEECTTCCCSSEEEEEEECTTSEEEEEEESSC--------CSSCCSCCEEEEEEETTTCC
T ss_pred EEEecCCCccEEEEcCCCCceEECCCCCCcccceEEEECCCCeEEEEecCCC--------CccccccCceEEEEeCCCCC
Confidence 9987543 466544444 45443221 3345667888899998643210 00112235689999887788
Q ss_pred EEEeecccc----cc---ccEEEeCCC-CEEEEEeC
Q 018474 182 TTVLHEGFY----FA---NGIALSKNE-DFVVVCES 209 (355)
Q Consensus 182 ~~~~~~~~~----~p---ngi~~~~dg-~~l~v~~~ 209 (355)
++.+..... .+ ..|+++|.. +.+|++..
T Consensus 286 W~~i~~~~~~~~~~~~~~~~i~v~p~~~~~ly~~~~ 321 (737)
T 2cn3_A 286 WIDITPIPYSSSDNRFCFAGLAVDRQNPDIIMVTSM 321 (737)
T ss_dssp EEECCSSCTTSTTCCSEEEEEEECTTCTTCEEEEEE
T ss_pred EEEccCCCCCCcccccccccEEEcCCCCCEEEEEec
Confidence 876643211 01 247888743 46777753
No 347
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=85.42 E-value=4.2 Score=36.43 Aligned_cols=26 Identities=12% Similarity=0.196 Sum_probs=22.8
Q ss_pred CCCeEEEEecCCEEEEEEcCCCeeEE
Q 018474 62 SKGALYTATRDGWVKYFILHNETLVN 87 (355)
Q Consensus 62 ~~g~l~~~~~~g~i~~~~~~~g~~~~ 87 (355)
.++.+|+++.+|+++.+|..+|+...
T Consensus 110 ~~g~Vy~Gs~~g~l~ald~~tG~~~W 135 (339)
T 2be1_A 110 EDEKVYTGSMRTIMYTINMLNGEIIS 135 (339)
T ss_dssp CCEEEEECEEEEEEEEEETTTCCEEE
T ss_pred cCCEEEEEecCCEEEEEECCCCcEEE
Confidence 47889999999999999999998653
No 348
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=79.19 E-value=5.6 Score=38.22 Aligned_cols=85 Identities=14% Similarity=0.116 Sum_probs=58.2
Q ss_pred eEEEEeCCC-----CeEEEeeccccccccEEEeCCCCEEEEEeCCCCeEEEEEeCC------CCC-cceeEe-cc-cCCC
Q 018474 171 QLRKYDPKL-----KETTVLHEGFYFANGIALSKNEDFVVVCESWKFRCRRYWLKG------DRA-GILDAF-IE-NLPG 236 (355)
Q Consensus 171 ~l~~~dp~~-----~~~~~~~~~~~~pngi~~~~dg~~l~v~~~~~~~i~~~~~~~------~~~-~~~~~~-~~-~~~g 236 (355)
++-..|+.. ..+..+......|.|+.++|||++++++.-....+.+|+.+. .++ ...... .+ .+.-
T Consensus 299 gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~Gl 378 (638)
T 3sbq_A 299 KTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGL 378 (638)
T ss_dssp CCCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCS
T ss_pred CeeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCC
Confidence 466778754 234555566678999999999999999999999999999852 111 111111 11 1111
Q ss_pred CcCceEECCCCCEEEEeec
Q 018474 237 GPDNINLAPDGSFWIGLIK 255 (355)
Q Consensus 237 ~p~~i~~d~~G~lwv~~~~ 255 (355)
-|-...+|.+|+.|.+.+-
T Consensus 379 GPlHt~Fd~~G~aYTtlfi 397 (638)
T 3sbq_A 379 GPLHTTFDGRGNAYTTLFI 397 (638)
T ss_dssp CEEEEEECSSSEEEEEETT
T ss_pred cccEEEECCCCceEeeeee
Confidence 3666789999999988754
No 349
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=77.72 E-value=41 Score=30.51 Aligned_cols=127 Identities=9% Similarity=0.083 Sum_probs=75.5
Q ss_pred CCceEEEeeCCCeEEEEecCCEEEEEEcCCCee-EEeeccCCCcccCeEECCCCCEEEEeCCCcEEEEc-CCC-eEEEcC
Q 018474 53 HPEDVSVVVSKGALYTATRDGWVKYFILHNETL-VNWKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVT-EEG-VEAIVP 129 (355)
Q Consensus 53 ~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~-~~~~~~~~~p~~gl~~d~~g~L~v~~~~~gl~~~~-~~g-~~~~~~ 129 (355)
.+..+++ ++..|+++ .++.|..++..+-.. ........... .+..-.. ++.+++..+.++.++ +++ ...+.
T Consensus 89 ~V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~-~i~~~~p-~~av~~~dG~L~v~dl~~~~~~~~~- 162 (388)
T 1xip_A 89 DVIFVCF--HGDQVLVS-TRNALYSLDLEELSEFRTVTSFEKPVF-QLKNVNN-TLVILNSVNDLSALDLRTKSTKQLA- 162 (388)
T ss_dssp TEEEEEE--ETTEEEEE-ESSEEEEEESSSTTCEEEEEECSSCEE-EEEECSS-EEEEEETTSEEEEEETTTCCEEEEE-
T ss_pred CeeEEEE--CCCEEEEE-cCCcEEEEEchhhhccCccceeeccee-eEEecCC-CEEEEECCCCEEEEEccCCcccccc-
Confidence 3788888 47889998 778999999643321 11111111233 4444322 377777666677777 455 43332
Q ss_pred CcCCcccEEEccCCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeE---EEee------c---cccccccEEE
Q 018474 130 DASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKET---TVLH------E---GFYFANGIAL 197 (355)
Q Consensus 130 ~~~~~~~l~~d~dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~---~~~~------~---~~~~pngi~~ 197 (355)
..+.+++++++| +.++. ..|.+..|+|++++. ..+. + +-.....|++
T Consensus 163 --~~Vs~v~WSpkG-~~vg~------------------~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~w 221 (388)
T 1xip_A 163 --QNVTSFDVTNSQ-LAVLL------------------KDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTI 221 (388)
T ss_dssp --ESEEEEEECSSE-EEEEE------------------TTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEE
T ss_pred --CCceEEEEcCCc-eEEEE------------------cCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEE
Confidence 368889999999 44432 245677778877774 2331 1 1233556778
Q ss_pred eCCCCEEEE
Q 018474 198 SKNEDFVVV 206 (355)
Q Consensus 198 ~~dg~~l~v 206 (355)
.+++.++.+
T Consensus 222 l~~~~flv~ 230 (388)
T 1xip_A 222 LSPQDFLAV 230 (388)
T ss_dssp SSSSEEEEE
T ss_pred ecCCeEEEE
Confidence 887775544
No 350
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=76.08 E-value=52 Score=32.77 Aligned_cols=149 Identities=11% Similarity=-0.046 Sum_probs=77.7
Q ss_pred ceEEEeeC-CCeEEEEecCCEEEEEEcCCCeeEEeeccC----CCcccCeEEC--CCCCEEEEeCCCcEEEEcCCC--eE
Q 018474 55 EDVSVVVS-KGALYTATRDGWVKYFILHNETLVNWKHID----SQSLLGLTTT--KDGGVILCDNEKGLLKVTEEG--VE 125 (355)
Q Consensus 55 ~~i~~d~~-~g~l~~~~~~g~i~~~~~~~g~~~~~~~~~----~~p~~gl~~d--~~g~L~v~~~~~gl~~~~~~g--~~ 125 (355)
..|+.++. .+.+|+++ ++.|++-.-....++.+.... .... -|+.. .+++||++...++|++-+..| .+
T Consensus 591 ~~i~~d~~~~~~~y~g~-~g~v~~S~DgG~tW~~~~~~lp~~~~~~~-~i~~~~~~~~~l~~~~~~~~l~~S~D~G~tW~ 668 (763)
T 3a0f_A 591 TGIAADRVQANTFYVYV-EGDFFVSTDGGKSYTKKGNGLPCCWTYTG-TPVTSNLRAGELWVSVKGVGIYHSTDFGNTFT 668 (763)
T ss_dssp SCEEECSSSTTCEEEEE-TTEEEEESSTTSBCEEECBTSCCSSCCCE-EEEECSSSTTCEEEEETTTEEEEESSTTSBCE
T ss_pred ceEEEeccCCCEEEEEc-CCCEEEEeCCCcCccccccCCCcccCccc-cEEECCCCCCcEEEEcCCCeEEEEcCCCCCce
Confidence 46777753 46688884 677776433223565543211 1122 15555 467899998766787776555 55
Q ss_pred EEcCCcCCc----c--cEEEc-c-CCcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCeEEEeec---ccccccc
Q 018474 126 AIVPDASFT----N--DVIAA-S-DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHE---GFYFANG 194 (355)
Q Consensus 126 ~~~~~~~~~----~--~l~~d-~-dG~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~~~~~~~---~~~~png 194 (355)
.+....... . ++++. + ...||+.... .....++||+-+-....++.+.. .+..+..
T Consensus 669 ~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~G~~-------------~~~~~~gl~~S~D~G~tW~~~~~~~~~~~~~~~ 735 (763)
T 3a0f_A 669 ALAGSGSSLNPAVFSIGAPQTPNATETLFLWGIP-------------SASQPEGLYMSTDNGGLWTRLNDDAHNYGGATV 735 (763)
T ss_dssp ECTTBTTTBEEEEEEEECCSSTTSSCEEEEEEEC-------------STTSCSEEEEESSTTSCCEECSCTTCCTBCEEE
T ss_pred EccCCCcccccceeEEeeecCCCCCceEEEEEEc-------------ccCCCcEEEEeCCCCCCcEeccCccccCCCcce
Confidence 554211111 1 11222 2 2467775300 00114578877655566776652 2222225
Q ss_pred EEEeCCCC-EEEEEeCCCCeEEEEEe
Q 018474 195 IALSKNED-FVVVCESWKFRCRRYWL 219 (355)
Q Consensus 195 i~~~~dg~-~l~v~~~~~~~i~~~~~ 219 (355)
|+.+|... .||++.- ..+|+.-++
T Consensus 736 i~~~p~~~~~v~~~T~-GrGi~~g~~ 760 (763)
T 3a0f_A 736 ISGDPRIYGRVYIGMN-GRGIICAQA 760 (763)
T ss_dssp EEECTTSTTEEEEEEB-SSCEEEEES
T ss_pred EEeCCCCCCEEEEeCC-CCeEEEEec
Confidence 77777443 4777643 445666554
No 351
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=69.69 E-value=54 Score=32.84 Aligned_cols=110 Identities=8% Similarity=0.016 Sum_probs=64.4
Q ss_pred CCcccCeEECCC--CCEEEEeCCCcEEEEcCCC--eEEEcCCc-------CCcccEEEccC--CcEEEEeCCCCCCCccc
Q 018474 93 SQSLLGLTTTKD--GGVILCDNEKGLLKVTEEG--VEAIVPDA-------SFTNDVIAASD--GTLYFTVASTKYTPTDF 159 (355)
Q Consensus 93 ~~p~~gl~~d~~--g~L~v~~~~~gl~~~~~~g--~~~~~~~~-------~~~~~l~~d~d--G~ly~~d~~~~~~~~~~ 159 (355)
+++. +|++++. +.+|++...+++++-+..| -+.+.... ..+.+|++|+. +.+|++..... .
T Consensus 15 g~i~-~i~~~p~~~~~~~a~~~~ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~--~--- 88 (789)
T 1sqj_A 15 GYIT-GIVAHPKTKDLLYARTDIGGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYV--G--- 88 (789)
T ss_dssp SCEE-EEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCT--T---
T ss_pred CcEE-EEEECCCCCCEEEEEecCCCEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccC--C---
Confidence 4667 8888864 6799998777888887655 44443311 35778899974 47888753200 0
Q ss_pred cccccccCCCCeEEEEeCCCCeEEEeecccc---------ccccEEEeCCC-CEEEEEeCCCCeEEE
Q 018474 160 YKDMAEGKPYGQLRKYDPKLKETTVLHEGFY---------FANGIALSKNE-DFVVVCESWKFRCRR 216 (355)
Q Consensus 160 ~~~~~~~~~~g~l~~~dp~~~~~~~~~~~~~---------~pngi~~~~dg-~~l~v~~~~~~~i~~ 216 (355)
...+.|++=+-....++.+..... ....++++|.. +.+|+. .....|++
T Consensus 89 -------~~~~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g-~~~~gl~~ 147 (789)
T 1sqj_A 89 -------DEWAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMG-TRTEGIWK 147 (789)
T ss_dssp -------SSCCEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEE-CSSSCEEE
T ss_pred -------CcccEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEE-eccCCEEE
Confidence 001566665544556666543211 12358888753 455554 33456654
No 352
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=69.32 E-value=19 Score=34.61 Aligned_cols=64 Identities=13% Similarity=0.234 Sum_probs=39.9
Q ss_pred eEEeeccCCCcccCeEECCCCCEEEEeCC-C-cEEEEc--C--C---C-e----EE-EcCC--cCCcccEEEccCCcEEE
Q 018474 85 LVNWKHIDSQSLLGLTTTKDGGVILCDNE-K-GLLKVT--E--E---G-V----EA-IVPD--ASFTNDVIAASDGTLYF 147 (355)
Q Consensus 85 ~~~~~~~~~~p~~gl~~d~~g~L~v~~~~-~-gl~~~~--~--~---g-~----~~-~~~~--~~~~~~l~~d~dG~ly~ 147 (355)
...+......|+ |+.+++||+-+++... . .+..++ + + + + .. .+.. ...|-+.++|++|+.|.
T Consensus 315 ~~~~iP~pksPH-Gv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYT 393 (638)
T 3sbq_A 315 FTRYVPVPKNPH-GCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYT 393 (638)
T ss_dssp SEEEEEESSSCC-CEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEE
T ss_pred eEEEEeCCCCCc-ceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEe
Confidence 444555667899 9999999986555433 2 244444 2 1 1 1 00 1111 16899999999999997
Q ss_pred Ee
Q 018474 148 TV 149 (355)
Q Consensus 148 ~d 149 (355)
+-
T Consensus 394 tl 395 (638)
T 3sbq_A 394 TL 395 (638)
T ss_dssp EE
T ss_pred ee
Confidence 74
No 353
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=64.88 E-value=1.1e+02 Score=30.00 Aligned_cols=114 Identities=10% Similarity=0.009 Sum_probs=65.1
Q ss_pred CCeEEEEe-c------CCEEEEEEcCCCeeEEeeccC-CC-cccCeEECCCCCEEEEeCCC---cEEEEcC-CC-eEEEc
Q 018474 63 KGALYTAT-R------DGWVKYFILHNETLVNWKHID-SQ-SLLGLTTTKDGGVILCDNEK---GLLKVTE-EG-VEAIV 128 (355)
Q Consensus 63 ~g~l~~~~-~------~g~i~~~~~~~g~~~~~~~~~-~~-p~~gl~~d~~g~L~v~~~~~---gl~~~~~-~g-~~~~~ 128 (355)
++.+|+-. . -..++++|+.+++|+...... .+ -+ +.+.-.+|.|||..... .++++|. +. .+.+.
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h-~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~ 529 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRH-SACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVT 529 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSC-EEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECC
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccc-eEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEcc
Confidence 77788632 1 135789999998888764322 11 12 33332488999974322 4888884 55 55544
Q ss_pred C---Cc--CCccc-EEEccC-CcEEEEeCCCCCCCccccccccccCCCCeEEEEeCCCCe------EEEeec
Q 018474 129 P---DA--SFTND-VIAASD-GTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKE------TTVLHE 187 (355)
Q Consensus 129 ~---~~--~~~~~-l~~d~d-G~ly~~d~~~~~~~~~~~~~~~~~~~~g~l~~~dp~~~~------~~~~~~ 187 (355)
. .. ..-.. ++++.+ |.||+......- . ......+++||+.+.+ ++.+..
T Consensus 530 ~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~------~----~~~~~~v~~yd~~~~~w~~~~~W~~~~~ 591 (695)
T 2zwa_A 530 PKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMD------Q----TTVSDKAIIFKYDAENATEPITVIKKLQ 591 (695)
T ss_dssp CSSGGGGSCCBSCEEEEETTTTEEEEECCBCTT------S----SCBCCEEEEEEECTTCSSCCEEEEEEEE
T ss_pred CCCCCCCcccceeEEEEeCCCCEEEEECCcCCC------C----CeeeCcEEEEEccCCccccceEEEEcCC
Confidence 3 11 22222 555655 789986432100 0 0123579999999888 666544
No 354
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=55.47 E-value=1e+02 Score=26.71 Aligned_cols=51 Identities=8% Similarity=-0.009 Sum_probs=28.6
Q ss_pred eEEEEEeCCCCeEEEEEECCCCCcccceeEEEEeCCEEEEee-c-----CCCeEEEeeC
Q 018474 293 ARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFDGNLYLAS-L-----QSNFIGILPL 345 (355)
Q Consensus 293 ~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~-~-----~~~~i~~~~~ 345 (355)
..+.+||+++.+....-..+... ....+++..+++||+-. . ..+.+.++++
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~--~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~ 224 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYG--TAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDF 224 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCC--CBSCEEEEETTEEEEECCEEETTEECCCEEEEEC
T ss_pred ccEEEEeCCCCcEEECCCCCCCC--cccccEEEECCEEEEEeeecCCCcccCceEEEEe
Confidence 47999999555554442223221 12245566788888842 1 2455666665
No 355
>3s9j_A Member of DUF4221 family; 6-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.75A {Bacteroides vulgatus}
Probab=46.19 E-value=96 Score=27.85 Aligned_cols=76 Identities=9% Similarity=0.114 Sum_probs=47.6
Q ss_pred CCCCEEEEEeCCCC--eEEEEEeCCCCCcceeEec-ccCC--CCcC-ceEECCCCCEEEEeecCCchhhHhhhcchhHHH
Q 018474 199 KNEDFVVVCESWKF--RCRRYWLKGDRAGILDAFI-ENLP--GGPD-NINLAPDGSFWIGLIKMNQTGVRAIQKCREKWE 272 (355)
Q Consensus 199 ~dg~~l~v~~~~~~--~i~~~~~~~~~~~~~~~~~-~~~~--g~p~-~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~ 272 (355)
.+++.|+.-+...+ .|..|+++..+....-.+- ++.. +.+. ++.+-.+..+|+.+...
T Consensus 37 ~~k~yL~~~N~~~~~~~i~~iDL~~~kl~k~i~~ekEGPNgi~~~~~~~~i~~~DsI~i~~~~~---------------- 100 (369)
T 3s9j_A 37 NGKEYLHFENTQKSLYDIVIFDIENQQIAKRIPLHKTGPNGLPAVFGSRPSPDSQYILVAQNNI---------------- 100 (369)
T ss_dssp TTEEEEEEEECSTTCCEEEEEETTTTEEEEEEECBSSSTTBCTTCCCEEESSSTTSEEEEEGGG----------------
T ss_pred CCcEEEEEeCCCCCcCcEEEEECCCCceeeeeccccCCCCCcccceeeEEecCCCEEEEEeCCc----------------
Confidence 34457888887777 9999998654432221121 1111 1232 24344667899987551
Q ss_pred HHHhccchhhcccCCCCCCceEEEEEeCCCCeEEEEEEC
Q 018474 273 LLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFND 311 (355)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~ 311 (355)
.+|..+|. +|+....+.-
T Consensus 101 --------------------~~i~l~n~-~G~~~~k~~~ 118 (369)
T 3s9j_A 101 --------------------SRLSSINS-QGEIIRNYNF 118 (369)
T ss_dssp --------------------TEEEEECT-TCCEEEEEEC
T ss_pred --------------------ceEEEECC-CceEEEEEec
Confidence 37999999 9999888754
No 356
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=33.08 E-value=2.5e+02 Score=25.04 Aligned_cols=63 Identities=14% Similarity=0.351 Sum_probs=45.1
Q ss_pred CCCCCceEEEeeCCCeEEEEecCCEEEEEEcCCCeeEEeeccCCCcccCeEECCCCCEEEEe---CCCcEEEEcCCC
Q 018474 50 CVNHPEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGGVILCD---NEKGLLKVTEEG 123 (355)
Q Consensus 50 ~~~~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~~~~~~~p~~gl~~d~~g~L~v~~---~~~gl~~~~~~g 123 (355)
...-|-+|.+..+.|.+|+-+..|-|+.+|.++|....-.... ...++++. ..+|++.+++.|
T Consensus 258 ~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS-----------~d~iF~ta~~~~~~Gi~~Vnr~G 323 (365)
T 2xzh_A 258 QNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRIS-----------GETIFVTAPHEATAGIIGVNRKG 323 (365)
T ss_dssp TTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECC-----------SSCEEEEEEEGGGTEEEEEETTC
T ss_pred cCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccC-----------CCceEEecccCCCCcEEEEcCCC
Confidence 3556899999988999999999999999999998754432222 22344443 235777777766
No 357
>3kvp_A Uncharacterized protein YMZC; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.40A {Bacillus subtilis}
Probab=28.21 E-value=58 Score=21.27 Aligned_cols=17 Identities=12% Similarity=0.225 Sum_probs=13.9
Q ss_pred CeEEEEeCCCCeEEEee
Q 018474 170 GQLRKYDPKLKETTVLH 186 (355)
Q Consensus 170 g~l~~~dp~~~~~~~~~ 186 (355)
-.||+||+++++++...
T Consensus 40 iKIykyde~tNeI~LkK 56 (72)
T 3kvp_A 40 IKIYEYNESRNEVKLKK 56 (72)
T ss_dssp EEEEEEETTTTEEEEEE
T ss_pred EEEEEeCCCCCeEEEEE
Confidence 47999999999987553
No 358
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=27.42 E-value=3.7e+02 Score=25.01 Aligned_cols=63 Identities=14% Similarity=0.351 Sum_probs=45.3
Q ss_pred CCCCCceEEEeeCCCeEEEEecCCEEEEEEcCCCeeEEeeccCCCcccCeEECCCCCEEEEe---CCCcEEEEcCCC
Q 018474 50 CVNHPEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGGVILCD---NEKGLLKVTEEG 123 (355)
Q Consensus 50 ~~~~p~~i~~d~~~g~l~~~~~~g~i~~~~~~~g~~~~~~~~~~~p~~gl~~d~~g~L~v~~---~~~gl~~~~~~g 123 (355)
...-|-+|.+.++.|.+|+-+..|-|+.+|.++|....-.... ...++++. ..+|++.+++.|
T Consensus 257 ~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs-----------~~~iF~t~~~~~~~Gi~~Vnr~G 322 (494)
T 1bpo_A 257 QNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRIS-----------GETIFVTAPHEATAGIIGVNRKG 322 (494)
T ss_dssp TTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECC-----------SSCEEEEEEETTTTEEEEEETTC
T ss_pred ccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeeccc-----------CCceEEecccCCCCcEEEEccCc
Confidence 3456889999988999999999999999999998754432222 23444442 235788887766
No 359
>4hcz_A PHD finger protein 1; protein-peptide complex, tudor, histone binding, H3K36ME3, N nucleus, transcription; HET: M3L; 1.85A {Homo sapiens}
Probab=20.60 E-value=1.7e+02 Score=18.43 Aligned_cols=14 Identities=29% Similarity=0.577 Sum_probs=11.3
Q ss_pred eEECCCCCEEEEee
Q 018474 241 INLAPDGSFWIGLI 254 (355)
Q Consensus 241 i~~d~~G~lwv~~~ 254 (355)
++..+||++|.|+.
T Consensus 11 LarwsDG~fYlGtI 24 (58)
T 4hcz_A 11 LARWTDGLLYLGTI 24 (58)
T ss_dssp EEECTTSCEEEEEE
T ss_pred EEEecCCCEEeEEE
Confidence 56778999999873
No 360
>4fww_A Macrophage-stimulating protein receptor; beta-propeller, cysteine-knot, receptor tyrosine kinase, MAC stimulating protein, N-glycosylation; HET: NAG BMA; 1.85A {Homo sapiens}
Probab=20.11 E-value=3e+02 Score=25.77 Aligned_cols=65 Identities=12% Similarity=0.153 Sum_probs=38.3
Q ss_pred CCceEEEeeCCC--eEEEEecCCEEEEEEcCCC-e----eEEee-ccCCCcccC--eEECCCCCEEEEeCCCcEEEEc
Q 018474 53 HPEDVSVVVSKG--ALYTATRDGWVKYFILHNE-T----LVNWK-HIDSQSLLG--LTTTKDGGVILCDNEKGLLKVT 120 (355)
Q Consensus 53 ~p~~i~~d~~~g--~l~~~~~~g~i~~~~~~~g-~----~~~~~-~~~~~p~~g--l~~d~~g~L~v~~~~~gl~~~~ 120 (355)
.-.+|++++.++ .+|+|+.+|+|.++..... . ...+. ...+.|. . |..+ .+.|||++ ..++.++.
T Consensus 406 ~~T~iav~~~~~~tV~FlGT~~G~l~Kv~~~~~~~~~~~~~~~~~~~~~~pi-~~~l~~~-~~~Lyv~s-~~~V~~vp 480 (527)
T 4fww_A 406 QVTALYVTRLDNVTVAHMGTMDGRILQVELVRSLNYLLYVSNFSLGDSGQPV-QRDVSRL-GDHLLFAS-GDQVFQVP 480 (527)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEEECSCCSSCCCEEEEEEETTSCCCB-CSCCEEE-TTEEEEEE-TTEEEEEE
T ss_pred EEEEEEEeccCCEEEEEEECCCCeEEEEEEcCCCCcceEEEEEEecCCCcee-ehhcccC-CCEEEEEE-CCEEEEEe
Confidence 357888886444 4889999999999865222 1 12221 1123343 2 3333 45788887 44777774
Done!