BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 018475
         (355 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|1QGX|A Chain A, X-Ray Structure Of Yeast Hal2p
 pdb|1K9Y|A Chain A, The Papase Hal2p Complexed With Magnesium Ions And
           Reaction Products: Amp And Inorganic Phosphate
 pdb|1K9Z|A Chain A, The Papase Hal2p Complexed With Zinc Ions
 pdb|1KA0|A Chain A, The Papase Hal2p Complexed With A Sodium Ion And The
           Reaction Product Amp
 pdb|1KA1|A Chain A, The Papase Hal2p Complexed With Calcium And Magnesium Ions
           And Reaction Substrate: Pap
          Length = 357

 Score =  157 bits (396), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 102/276 (36%), Positives = 140/276 (50%), Gaps = 27/276 (9%)

Query: 73  SKNDKSPVTVADYGSQALVSFALQKEFPSEPFSLVAEEDSKDLRQDGAQETLERITKLVN 132
           +KND SPVT  DY +Q ++  A++  FP +   +V EE S  L           ++ ++N
Sbjct: 38  TKNDNSPVTTGDYAAQTIIINAIKSNFPDD--KVVGEESSSGLSD-------AFVSGILN 88

Query: 133 ETLASDGAYNTS--------------TLSTEDVIRAIDGGKSEGGSHGRHWVLDPIDGTK 178
           E  A+D  YN +                S EDV + ID G  EGG  GR W LDPIDGTK
Sbjct: 89  EIKANDEVYNKNYKKDDFLFTNDQFPLKSLEDVRQIIDFGNYEGGRKGRFWCLDPIDGTK 148

Query: 179 GFVRGDQYAIALALLDEGKVVLGVLACPNLPLASIVGDNQHSSNNEVGCLFFAQVGAGT- 237
           GF+RG+Q+A+ LAL+ +G V LG + CPNL L+S  G      +   G +F A  G G  
Sbjct: 149 GFLRGEQFAVCLALIVDGVVQLGCIGCPNLVLSS-YGAQDLKGHESFGYIFRAVRGLGAF 207

Query: 238 YMQSLSGSLPVKVQVTXXXXXXXXXXXXXXXXXXXNRDLSSLIAKKLGVKAPPVRIDSQA 297
           Y  S       K+ V                    + D  + I  KL + +  + +DSQA
Sbjct: 208 YSPSSDAESWTKIHVRHLKDTKDMITLEGVEKGHSSHDEQTAIKNKLNI-SKSLHLDSQA 266

Query: 298 KYGALSRGDGAIYLRFPRK-GYREKIWDHAAGSIVV 332
           KY  L+ G   +YLR P K  Y+EKIWDHAAG+++V
Sbjct: 267 KYCLLALGLADVYLRLPIKLSYQEKIWDHAAGNVIV 302


>pdb|2P3N|A Chain A, Thermotoga Maritima Impase Tm1415
 pdb|2P3N|B Chain B, Thermotoga Maritima Impase Tm1415
 pdb|2P3N|C Chain C, Thermotoga Maritima Impase Tm1415
 pdb|2P3N|D Chain D, Thermotoga Maritima Impase Tm1415
 pdb|2P3V|A Chain A, Thermotoga Maritima Impase Tm1415
 pdb|2P3V|B Chain B, Thermotoga Maritima Impase Tm1415
 pdb|2P3V|C Chain C, Thermotoga Maritima Impase Tm1415
 pdb|2P3V|D Chain D, Thermotoga Maritima Impase Tm1415
          Length = 256

 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 21/43 (48%), Positives = 30/43 (69%), Gaps = 1/43 (2%)

Query: 167 RHWVLDPIDGTKGFVRG-DQYAIALALLDEGKVVLGVLACPNL 208
           R W++DPIDGT  FV G   ++I+LA ++ G+V LGV+  P L
Sbjct: 74  RLWIIDPIDGTINFVHGLPNFSISLAYVENGEVKLGVVHAPAL 116


>pdb|3T0J|A Chain A, Crystal Structure Of Inositol Monophosphatase - Ii From
           Staphylococcus Aureus Mssa476
 pdb|3T0J|B Chain B, Crystal Structure Of Inositol Monophosphatase - Ii From
           Staphylococcus Aureus Mssa476
 pdb|3T0J|C Chain C, Crystal Structure Of Inositol Monophosphatase - Ii From
           Staphylococcus Aureus Mssa476
 pdb|3T0J|D Chain D, Crystal Structure Of Inositol Monophosphatase - Ii From
           Staphylococcus Aureus Mssa476
          Length = 283

 Score = 39.7 bits (91), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 63/150 (42%), Gaps = 42/150 (28%)

Query: 121 QETLERITKLVNETLASDGAYNTSTL------STEDVI----------RAIDGGKSEGG- 163
           QE   RI +L+ + L  +   N + L      +TED I            + G +  G  
Sbjct: 20  QEAGIRIKQLMEQNLTIETKSNPNDLVTNVDKATEDFIFDTILETYPNHQVLGEEGHGHD 79

Query: 164 ---SHGRHWVLDPIDGTKGFV-RGDQYAIALALLDEGKVVLGVLACPNLPLASIVGDNQH 219
              S G  WV+DPIDGT  FV + + +AI++ +  +GK           P A  V D   
Sbjct: 80  IDTSKGTVWVVDPIDGTLNFVHQQENFAISIGIYIDGK-----------PYAGFVYDVM- 127

Query: 220 SSNNEVGCLFFAQVGAGTYMQSLSGSLPVK 249
                   L+ A+VG G Y     GS P+K
Sbjct: 128 -----ADVLYHAKVGEGAY----RGSQPLK 148


>pdb|3B8B|A Chain A, Crystal Structure Of Cysq From Bacteroides
           Thetaiotaomicron, A Bacterial Member Of The Inositol
           Monophosphatase Family
          Length = 292

 Score = 37.7 bits (86), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 10/57 (17%)

Query: 160 SEGGSHGRH---------WVLDPIDGTKGFV-RGDQYAIALALLDEGKVVLGVLACP 206
           SE G H  +         W++DP+DGTK F+ R  ++ + +AL+     V GV+  P
Sbjct: 84  SEEGKHXDYAVRRGWDTLWIVDPLDGTKEFIKRNGEFTVNIALVQNAVPVXGVIYVP 140


>pdb|2QFL|A Chain A, Structure Of Suhb: Inositol Monophosphatase And Extragenic
           Suppressor From E. Coli
          Length = 267

 Score = 37.4 bits (85), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 7/68 (10%)

Query: 140 AYNTSTLSTEDVIRAIDGGKSEGGSHGRHWVLDPIDGTKGFV-RGDQYAIALALLDEGKV 198
           +Y   T+ TE+       G+ EG      WV+DP+DGT  F+ R   +A+++A+  +G+ 
Sbjct: 58  SYPQHTIITEE------SGELEGTDQDVQWVIDPLDGTTNFIKRLPHFAVSIAVRIKGRT 111

Query: 199 VLGVLACP 206
            + V+  P
Sbjct: 112 EVAVVYDP 119


>pdb|3LUZ|A Chain A, Crystal Structure Of Extragenic Suppressor Protein Suhb
           From Bartonella Henselae, Via Combined Iodide Sad
           Molecular Replacement
 pdb|3LUZ|B Chain B, Crystal Structure Of Extragenic Suppressor Protein Suhb
           From Bartonella Henselae, Via Combined Iodide Sad
           Molecular Replacement
 pdb|3LV0|A Chain A, Crystal Structure Of Extragenic Suppressor Protein Suhb
           From Bartonella Henselae, Native
 pdb|3LV0|B Chain B, Crystal Structure Of Extragenic Suppressor Protein Suhb
           From Bartonella Henselae, Native
          Length = 267

 Score = 37.0 bits (84), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 18/46 (39%), Positives = 31/46 (67%), Gaps = 2/46 (4%)

Query: 163 GSHGRH-WVLDPIDGTKGFVRG-DQYAIALALLDEGKVVLGVLACP 206
           G   +H +++DP+DGT  F+ G   +A+++AL  +GK+V GV+  P
Sbjct: 80  GEDSQHRFIVDPLDGTTNFLHGIPFFAVSIALESQGKIVAGVIYNP 125


>pdb|1JP4|A Chain A, Crystal Structure Of An Enzyme Displaying Both Inositol-
           Polyphosphate 1-Phosphatase And 3'-Phosphoadenosine-5'-
           Phosphate Phosphatase Activities
          Length = 308

 Score = 36.6 bits (83), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 55/134 (41%), Gaps = 36/134 (26%)

Query: 81  TVADYGSQALVSFALQKEFPSEPFSLVAEED------SKDLRQDGAQETLERITKLVNET 134
           T AD   Q  +  +L ++FP    +++ EED       ++L +DG  E          E 
Sbjct: 48  TKADRMVQMSICSSLSRKFPK--LTIIGEEDLPPGEVDQELIEDGQSE----------EI 95

Query: 135 LASDGAYNTSTLSTEDVIRAIDGGKSEGGSHGRHWVLDPIDGTKGFVRG--DQYAIALAL 192
           L        S +  ED++                WV DP+DGTK +  G  D   + + +
Sbjct: 96  LKQPCPSQYSAIKEEDLVV---------------WV-DPVDGTKEYTEGLLDNVTVLIGI 139

Query: 193 LDEGKVVLGVLACP 206
             EGK + G++  P
Sbjct: 140 AYEGKAIAGIINQP 153


>pdb|3RYD|A Chain A, Crystal Strucutre Of Ca Bound Impase Family Protein From
           Staphylococcus Aureus
 pdb|3RYD|C Chain C, Crystal Strucutre Of Ca Bound Impase Family Protein From
           Staphylococcus Aureus
          Length = 273

 Score = 36.2 bits (82), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 33/80 (41%), Gaps = 18/80 (22%)

Query: 169 WVLDPIDGTKGFVRGDQ-YAIALALLDEGKVVLGVLACPNLPLASIVGDNQHSSNNEVGC 227
           W++DPIDGT   V+  + Y I LA   EGK           P+ S V D  H        
Sbjct: 93  WIMDPIDGTANLVKQQEDYCIILAYFYEGK-----------PMLSYVYDYPHKK------ 135

Query: 228 LFFAQVGAGTYMQSLSGSLP 247
           L+ A  G G +   +    P
Sbjct: 136 LYKAIRGEGAFCNGIKMEEP 155


>pdb|3QMF|A Chain A, Crystal Strucuture Of An Inositol Monophosphatase Family
           Protein (Sas2203) From Staphylococcus Aureus Mssa476
 pdb|3QMF|B Chain B, Crystal Strucuture Of An Inositol Monophosphatase Family
           Protein (Sas2203) From Staphylococcus Aureus Mssa476
          Length = 273

 Score = 36.2 bits (82), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 33/80 (41%), Gaps = 18/80 (22%)

Query: 169 WVLDPIDGTKGFVRGDQ-YAIALALLDEGKVVLGVLACPNLPLASIVGDNQHSSNNEVGC 227
           W++DPIDGT   V+  + Y I LA   EGK           P+ S V D  H        
Sbjct: 93  WIMDPIDGTANLVKQQEDYCIILAYFYEGK-----------PMLSYVYDYPHKK------ 135

Query: 228 LFFAQVGAGTYMQSLSGSLP 247
           L+ A  G G +   +    P
Sbjct: 136 LYKAIRGEGAFCNGIKMEEP 155


>pdb|2WEF|A Chain A, Human 3'(2'), 5'-Bisphosphate Nucleotidase 1 (Bpnt1) In
           Complex With Amp, Po4 And Magnesium
          Length = 311

 Score = 35.8 bits (81), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 54/128 (42%), Gaps = 24/128 (18%)

Query: 81  TVADYGSQALVSFALQKEFPSEPFSLVAEEDSKDLRQDGAQETLERITKLVNETLASDGA 140
           T AD  +Q  +  +L ++FP    +++ EED      D  QE +E       E L     
Sbjct: 44  TKADRLAQMSICSSLARKFPK--LTIIGEEDLPSEEVD--QELIE--DSQWEEILKQPCP 97

Query: 141 YNTSTLSTEDVIRAIDGGKSEGGSHGRHWVLDPIDGTKGFVRG--DQYAIALALLDEGKV 198
              S +  ED++                WV DP+DGTK +  G  D   + + +  EGK 
Sbjct: 98  SQYSAIKEEDLVV---------------WV-DPLDGTKEYTEGLLDNVTVLIGIAYEGKA 141

Query: 199 VLGVLACP 206
           + GV+  P
Sbjct: 142 IAGVINQP 149


>pdb|2BJI|A Chain A, High Resolution Structure Of Myo-Inositol Monophosphatase,
           The Target Of Lithium Therapy
 pdb|2BJI|B Chain B, High Resolution Structure Of Myo-Inositol Monophosphatase,
           The Target Of Lithium Therapy
          Length = 277

 Score = 33.1 bits (74), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%)

Query: 169 WVLDPIDGTKGFVRGDQY-AIALALLDEGKVVLGVL 203
           W++DPIDGT  FV G  + A+++  +   K+  G++
Sbjct: 87  WIIDPIDGTTNFVHGFPFVAVSIGFVVNKKMEFGIV 122


>pdb|2PCR|A Chain A, Crystal Structure Of Myo-Inositol-1(Or 4)-Monophosphatase
           (Aq_1983) From Aquifex Aeolicus Vf5
 pdb|2PCR|B Chain B, Crystal Structure Of Myo-Inositol-1(Or 4)-Monophosphatase
           (Aq_1983) From Aquifex Aeolicus Vf5
 pdb|2PCR|C Chain C, Crystal Structure Of Myo-Inositol-1(Or 4)-Monophosphatase
           (Aq_1983) From Aquifex Aeolicus Vf5
 pdb|2PCR|D Chain D, Crystal Structure Of Myo-Inositol-1(Or 4)-Monophosphatase
           (Aq_1983) From Aquifex Aeolicus Vf5
          Length = 264

 Score = 31.2 bits (69), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 12/40 (30%), Positives = 25/40 (62%), Gaps = 1/40 (2%)

Query: 168 HWVLDPIDGTKGFVRGDQ-YAIALALLDEGKVVLGVLACP 206
            W +DP+DGTK ++ G   +A+++ L+   + ++G +  P
Sbjct: 82  RWFIDPLDGTKNYINGFPIFAVSVGLVKGEEPIVGAVYLP 121


>pdb|2Q74|A Chain A, Mycobacterium Tuberculosis Suhb
 pdb|2Q74|B Chain B, Mycobacterium Tuberculosis Suhb
 pdb|2Q74|C Chain C, Mycobacterium Tuberculosis Suhb
          Length = 299

 Score = 30.8 bits (68), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 14/23 (60%), Positives = 17/23 (73%), Gaps = 1/23 (4%)

Query: 169 WVLDPIDGTKGFVRG-DQYAIAL 190
           WVLDPIDGT  FV G   YA+++
Sbjct: 101 WVLDPIDGTVNFVYGIPAYAVSI 123


>pdb|4AS5|A Chain A, Structure Of Mouse Inositol Monophosphatase 1
 pdb|4AS5|B Chain B, Structure Of Mouse Inositol Monophosphatase 1
 pdb|4AS5|C Chain C, Structure Of Mouse Inositol Monophosphatase 1
 pdb|4AS5|D Chain D, Structure Of Mouse Inositol Monophosphatase 1
          Length = 277

 Score = 30.8 bits (68), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)

Query: 169 WVLDPIDGTKGFV-RGDQYAIALALLDEGKVVLGVL 203
           WV+DPIDGT  FV R    A+++  L   ++  G++
Sbjct: 87  WVIDPIDGTTNFVHRFPFVAVSIGFLVNKEMEFGIV 122


>pdb|2HHM|A Chain A, Structure Of Inositol Monophosphatase, The Putative Target
           Of Lithium Therapy
 pdb|2HHM|B Chain B, Structure Of Inositol Monophosphatase, The Putative Target
           Of Lithium Therapy
 pdb|1AWB|A Chain A, Human Myo-Inositol Monophosphatase In Complex With D-
           Inositol-1-Phosphate And Calcium
 pdb|1AWB|B Chain B, Human Myo-Inositol Monophosphatase In Complex With D-
           Inositol-1-Phosphate And Calcium
          Length = 276

 Score = 30.8 bits (68), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)

Query: 169 WVLDPIDGTKGFV-RGDQYAIALALLDEGKVVLGVL 203
           W++DPIDGT  FV R    A+++      K+  GV+
Sbjct: 86  WIIDPIDGTTNFVHRFPFVAVSIGFAVNKKIEFGVV 121


>pdb|1IMA|A Chain A, Structural Analysis Of Inositol Monophosphatase Complexes
           With Substrates
 pdb|1IMA|B Chain B, Structural Analysis Of Inositol Monophosphatase Complexes
           With Substrates
 pdb|1IMB|A Chain A, Structural Analysis Of Inositol Monophosphatase Complexes
           With Substrates
 pdb|1IMB|B Chain B, Structural Analysis Of Inositol Monophosphatase Complexes
           With Substrates
 pdb|1IMC|A Chain A, Structural Studies Of Metal Binding By Inositol
           Monophosphatase: Evidence For Two-Metal Ion Catalysis
 pdb|1IMC|B Chain B, Structural Studies Of Metal Binding By Inositol
           Monophosphatase: Evidence For Two-Metal Ion Catalysis
 pdb|1IMD|A Chain A, Structural Studies Of Metal Binding By Inositol
           Monophosphatase: Evidence For Two-metal Ion Catalysis
 pdb|1IMD|B Chain B, Structural Studies Of Metal Binding By Inositol
           Monophosphatase: Evidence For Two-metal Ion Catalysis
 pdb|1IME|A Chain A, Structural Studies Of Metal Binding By Inositol
           Monophosphatase: Evidence For Two-Metal Ion Catalysis
 pdb|1IME|B Chain B, Structural Studies Of Metal Binding By Inositol
           Monophosphatase: Evidence For Two-Metal Ion Catalysis
 pdb|1IMF|A Chain A, Structural Studies Of Metal Binding By Inositol
           Monophosphatase: Evidence For Two-Metal Ion Catalysis
 pdb|4AS4|A Chain A, Structure Of Human Inositol Monophosphatase 1
 pdb|4AS4|B Chain B, Structure Of Human Inositol Monophosphatase 1
          Length = 277

 Score = 30.8 bits (68), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)

Query: 169 WVLDPIDGTKGFV-RGDQYAIALALLDEGKVVLGVL 203
           W++DPIDGT  FV R    A+++      K+  GV+
Sbjct: 87  WIIDPIDGTTNFVHRFPFVAVSIGFAVNKKIEFGVV 122


>pdb|2FVZ|A Chain A, Human Inositol Monophosphosphatase 2
 pdb|2FVZ|B Chain B, Human Inositol Monophosphosphatase 2
 pdb|2FVZ|C Chain C, Human Inositol Monophosphosphatase 2
 pdb|2FVZ|D Chain D, Human Inositol Monophosphosphatase 2
          Length = 273

 Score = 30.0 bits (66), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)

Query: 164 SHGRHWVLDPIDGTKGFV-RGDQYAIALALLDEGKVVLGVL 203
           +H   W++DPIDGT  FV R    A+++      ++  GV+
Sbjct: 78  THSPTWIIDPIDGTCNFVHRFPTVAVSIGFAVRQELEFGVI 118


>pdb|2CZH|A Chain A, Crystal Structure Of Human Myo-Inositol Monophosphatase 2
           (Impa2) With Phosphate Ion (Orthorhombic Form)
 pdb|2CZH|B Chain B, Crystal Structure Of Human Myo-Inositol Monophosphatase 2
           (Impa2) With Phosphate Ion (Orthorhombic Form)
 pdb|2CZI|A Chain A, Crystal Structure Of Human Myo-Inositol Monophosphatase 2
           (Impa2) With Calcium And Phosphate Ions
 pdb|2CZK|A Chain A, Crystal Structure Of Human Myo-Inositol Monophosphatase 2
           (Impa2) (Trigonal Form)
 pdb|2DDK|A Chain A, Crystal Structure Of Human Myo-Inositol Monophosphatase 2
           (Impa2) (Orthorhombic Form)
 pdb|2DDK|B Chain B, Crystal Structure Of Human Myo-Inositol Monophosphatase 2
           (Impa2) (Orthorhombic Form)
          Length = 299

 Score = 30.0 bits (66), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)

Query: 164 SHGRHWVLDPIDGTKGFV-RGDQYAIALALLDEGKVVLGVL 203
           +H   W++DPIDGT  FV R    A+++      ++  GV+
Sbjct: 104 THSPTWIIDPIDGTCNFVHRFPTVAVSIGFAVRQELEFGVI 144


>pdb|2K46|A Chain A, Xenopus Laevis Malectin Complexed With Nigerose
           (Glcalpha1- 3glc)
 pdb|2KR2|A Chain A, Xenopus Laevis Malectin Complexed With Maltose
           (Glcalpha1-4glc)
          Length = 190

 Score = 28.5 bits (62), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 3/46 (6%)

Query: 149 EDVIRAID-GGKSEGGSHGRHWVLDPIDGTKGFVRGDQYAIALALL 193
           + VI A++ GG+S    HG H+  DP++G  G  R   Y + L +L
Sbjct: 8   DKVIWAVNAGGESHVDVHGIHYRKDPLEGRVG--RASDYGMKLPIL 51


>pdb|2JWP|A Chain A, Malectin
          Length = 174

 Score = 28.5 bits (62), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 3/44 (6%)

Query: 151 VIRAID-GGKSEGGSHGRHWVLDPIDGTKGFVRGDQYAIALALL 193
           VI A++ GG+S    HG H+  DP++G  G  R   Y + L +L
Sbjct: 6   VIWAVNAGGESHVDVHGIHYRKDPLEGRVG--RASDYGMKLPIL 47


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.316    0.133    0.377 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,926,256
Number of Sequences: 62578
Number of extensions: 333647
Number of successful extensions: 657
Number of sequences better than 100.0: 23
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 638
Number of HSP's gapped (non-prelim): 25
length of query: 355
length of database: 14,973,337
effective HSP length: 100
effective length of query: 255
effective length of database: 8,715,537
effective search space: 2222461935
effective search space used: 2222461935
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 52 (24.6 bits)