Query 018477
Match_columns 355
No_of_seqs 205 out of 1552
Neff 5.4
Searched_HMMs 29240
Date Mon Mar 25 15:53:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018477.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018477hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2bz1_A GTP cyclohydrolase II; 100.0 2.1E-74 7.1E-79 527.3 12.0 193 133-326 3-195 (196)
2 1k4i_A 3,4-dihydroxy-2-butanon 100.0 7.7E-49 2.6E-53 364.3 10.3 129 6-134 88-228 (233)
3 3mio_A DHBP synthase, 3,4-dihy 100.0 1.3E-48 4.5E-53 358.0 11.6 125 6-130 80-206 (206)
4 1tks_A 3,4-dihydroxy-2-butanon 100.0 3.3E-48 1.1E-52 354.7 11.9 124 4-127 79-203 (204)
5 1snn_A DHBP synthase, 3,4-dihy 100.0 9E-48 3.1E-52 356.8 9.8 120 8-128 97-222 (227)
6 1g57_A DHBP synthase, 3,4-dihy 100.0 2.3E-46 8E-51 346.0 11.8 127 6-132 89-215 (217)
7 3ct4_A PTS-dependent dihydroxy 78.9 1.6 5.4E-05 42.5 4.2 92 151-279 37-134 (332)
8 1oi2_A Hypothetical protein YC 77.2 1.7 5.7E-05 42.8 3.8 93 151-279 44-142 (366)
9 2iu4_A DHA-DHAQ, dihydroxyacet 71.3 2.3 7.8E-05 41.5 3.1 92 151-279 33-130 (336)
10 1un8_A Dihydroxyacetone kinase 60.1 5 0.00017 41.5 3.2 92 151-279 40-137 (552)
11 3n2l_A OPRT, oprtase, orotate 58.4 27 0.00094 32.0 7.6 76 51-130 142-220 (238)
12 2cyg_A Beta-1, 3-glucananse; e 53.7 12 0.00041 35.8 4.5 42 261-302 15-56 (312)
13 3em5_A Beta-1,3-glucanase; gly 51.4 8.7 0.0003 36.9 3.1 41 262-302 17-57 (316)
14 1aq0_A 1,3-1,4-beta-glucanase; 51.4 8.1 0.00028 36.9 2.9 42 261-302 15-56 (306)
15 1ghs_A 1,3-beta-glucanase; hyd 50.9 8.3 0.00028 36.8 2.9 41 262-302 16-56 (306)
16 4fd4_A Arylalkylamine N-acetyl 48.2 20 0.00068 29.5 4.6 38 266-303 153-190 (217)
17 3ur8_A Glucan endo-1,3-beta-D- 48.2 10 0.00035 36.5 3.0 42 262-303 18-59 (323)
18 4h89_A GCN5-related N-acetyltr 42.7 25 0.00084 28.6 4.2 37 266-302 115-154 (173)
19 2g3a_A Acetyltransferase; stru 42.3 8.9 0.0003 30.1 1.4 36 267-302 103-138 (152)
20 3qb8_A A654L protein; GNAT N-a 41.8 29 0.00098 28.0 4.5 38 265-302 133-170 (197)
21 1tif_A IF3-N, translation init 39.6 25 0.00084 27.2 3.4 32 89-120 15-49 (78)
22 4e0a_A BH1408 protein; structu 38.9 27 0.00091 26.9 3.7 39 265-303 114-154 (164)
23 1y9w_A Acetyltransferase; stru 38.3 16 0.00055 28.3 2.3 36 267-302 91-126 (140)
24 3te4_A GH12636P, dopamine N ac 37.3 26 0.00088 29.6 3.7 37 266-302 152-188 (215)
25 1lh0_A OMP synthase; loop clos 34.6 1.5E+02 0.0051 25.9 8.4 75 51-129 117-194 (213)
26 2j8m_A Acetyltransferase PA486 33.0 58 0.002 25.9 5.0 57 217-301 88-146 (172)
27 3mjd_A Orotate phosphoribosylt 32.8 67 0.0023 29.2 5.8 66 64-129 145-214 (232)
28 1yr0_A AGR_C_1654P, phosphinot 29.2 67 0.0023 25.6 4.7 57 217-301 89-147 (175)
29 2jis_A Cysteine sulfinic acid 29.0 62 0.0021 31.7 5.3 47 71-117 246-293 (515)
30 2wfu_B Probable insulin-like p 28.9 31 0.0011 21.3 1.9 17 196-212 5-21 (26)
31 1js3_A DDC;, DOPA decarboxylas 28.8 72 0.0025 30.8 5.7 49 69-117 220-269 (486)
32 3op7_A Aminotransferase class 28.6 72 0.0025 29.1 5.4 35 83-117 153-191 (375)
33 2jlm_A Putative phosphinothric 28.0 76 0.0026 25.8 5.0 35 267-301 118-154 (182)
34 3i3g_A N-acetyltransferase; ma 26.9 41 0.0014 26.1 3.0 101 198-300 49-156 (161)
35 3nmy_A Xometc, cystathionine g 26.8 70 0.0024 30.5 5.1 36 82-117 150-186 (400)
36 3ewt_E Tumor necrosis factor r 26.1 28 0.00096 21.3 1.4 16 99-114 10-25 (25)
37 3ri6_A O-acetylhomoserine sulf 26.1 70 0.0024 31.1 5.0 39 79-117 162-201 (430)
38 1u6m_A Acetyltransferase, GNAT 26.1 59 0.002 26.8 4.0 58 217-302 118-177 (199)
39 3tqx_A 2-amino-3-ketobutyrate 25.7 91 0.0031 28.4 5.5 34 84-117 175-209 (399)
40 3qhx_A Cystathionine gamma-syn 25.4 71 0.0024 30.1 4.8 39 79-117 146-185 (392)
41 3f0h_A Aminotransferase; RER07 25.3 74 0.0025 28.8 4.8 34 84-117 144-178 (376)
42 3k40_A Aromatic-L-amino-acid d 25.2 1E+02 0.0034 30.1 6.0 52 66-117 216-268 (475)
43 4fd5_A Arylalkylamine N-acetyl 24.7 35 0.0012 28.8 2.3 37 266-302 157-193 (222)
44 1cjw_A Protein (serotonin N-ac 24.6 56 0.0019 25.0 3.3 34 267-301 117-151 (166)
45 3ndn_A O-succinylhomoserine su 24.3 93 0.0032 29.8 5.5 36 82-117 164-200 (414)
46 3jvn_A Acetyltransferase; alph 24.1 1.1E+02 0.0038 23.5 5.1 36 266-301 115-152 (166)
47 1z7d_A Ornithine aminotransfer 24.1 64 0.0022 30.8 4.3 40 82-122 210-254 (433)
48 1ohv_A 4-aminobutyrate aminotr 23.6 53 0.0018 32.0 3.6 40 84-124 258-302 (472)
49 1ghe_A Acetyltransferase; acyl 23.2 45 0.0015 25.9 2.5 35 267-302 118-154 (177)
50 3lvm_A Cysteine desulfurase; s 23.1 63 0.0022 30.0 3.9 36 82-117 161-197 (423)
51 2fiw_A GCN5-related N-acetyltr 22.6 64 0.0022 25.1 3.4 36 266-302 109-144 (172)
52 2i6c_A Putative acetyltransfer 22.6 52 0.0018 25.2 2.7 34 268-301 104-140 (160)
53 2pc1_A Acetyltransferase, GNAT 22.5 64 0.0022 26.3 3.4 47 257-303 122-174 (201)
54 1bs0_A Protein (8-amino-7-oxon 22.4 85 0.0029 28.7 4.6 33 85-117 169-202 (384)
55 2okj_A Glutamate decarboxylase 22.1 84 0.0029 30.6 4.7 47 71-117 232-279 (504)
56 1vef_A Acetylornithine/acetyl- 21.9 86 0.003 28.8 4.6 36 82-117 183-223 (395)
57 1kmj_A Selenocysteine lyase; p 21.8 97 0.0033 28.2 4.9 34 84-117 164-198 (406)
58 1svv_A Threonine aldolase; str 21.8 62 0.0021 29.0 3.5 34 84-117 145-181 (359)
59 3u02_A Putative transcription- 21.8 1.1E+02 0.0036 28.5 5.0 129 82-223 90-249 (252)
60 2w8t_A SPT, serine palmitoyltr 21.7 85 0.0029 29.6 4.6 38 84-122 194-232 (427)
61 3mgd_A Predicted acetyltransfe 21.6 38 0.0013 26.0 1.7 36 267-303 112-147 (157)
62 1t3i_A Probable cysteine desul 21.6 1.1E+02 0.0038 28.0 5.3 34 84-117 169-203 (420)
63 1vkm_A Conserved hypothetical 21.6 64 0.0022 30.8 3.5 52 62-119 130-181 (297)
64 1tiq_A Protease synthase and s 21.5 46 0.0016 27.1 2.3 58 217-302 96-155 (180)
65 1vk9_A Conserved hypothetical 21.4 1.3E+02 0.0046 25.8 5.2 94 198-306 15-119 (151)
66 4e1o_A HDC, histidine decarbox 21.0 1.1E+02 0.0038 29.7 5.3 50 68-117 225-275 (481)
67 2l09_A ASR4154 protein; proto- 20.8 89 0.003 23.0 3.5 26 102-127 25-50 (62)
68 3f9t_A TDC, L-tyrosine decarbo 20.8 68 0.0023 29.0 3.6 34 84-117 171-205 (397)
69 2ae6_A Acetyltransferase, GNAT 20.7 96 0.0033 24.5 4.1 37 266-302 108-146 (166)
70 1z4e_A Transcriptional regulat 20.5 80 0.0028 24.3 3.5 55 217-299 91-147 (153)
71 2e7j_A SEP-tRNA:Cys-tRNA synth 20.4 90 0.0031 28.1 4.3 34 84-117 147-181 (371)
72 3vp6_A Glutamate decarboxylase 20.4 1.1E+02 0.0038 30.1 5.3 49 69-117 233-282 (511)
73 3eo4_A Uncharacterized protein 20.4 53 0.0018 25.7 2.4 34 268-301 119-154 (164)
74 1fc4_A 2-amino-3-ketobutyrate 20.3 85 0.0029 28.9 4.2 34 84-117 177-211 (401)
75 3ruy_A Ornithine aminotransfer 20.2 98 0.0034 28.4 4.5 39 79-117 177-220 (392)
No 1
>2bz1_A GTP cyclohydrolase II; riboflavin biosynthesis, catalytic zinc, magnesium; 1.54A {Escherichia coli} SCOP: c.144.1.1 PDB: 2bz0_A
Probab=100.00 E-value=2.1e-74 Score=527.34 Aligned_cols=193 Identities=47% Similarity=0.802 Sum_probs=169.0
Q ss_pred hhhcccccccCCcccEEEEEEEeCCCCceEEEEEECcCCCCCcceEEeccCCccccccCCCCCCChHHHHHHHHHHHHcC
Q 018477 133 VELAAAAPIPTMWGPFKAHCYRSLLDGIEHIAMVKGEIGDGQDILVRVHSECLTGDIFGSARCDCGNQLALAMKQIEAAG 212 (355)
Q Consensus 133 V~r~~~~~lpT~~G~F~~~~y~~~~~g~eH~ALv~Gdi~~~~~vlVRVHS~cltgDvfgs~~CdCg~qL~~Al~~Ia~~G 212 (355)
|++++++++||.||+|++++|++..++.||+|||+|++.+++||||||||+|+|||+|||.+|||+|||++||++|+++|
T Consensus 3 V~~v~~~~lpT~~G~f~~~~y~~~~~~~eH~ALv~G~i~~~~~vLVRvHsec~tgDvfgs~rcdcg~qL~~Al~~I~~~G 82 (196)
T 2bz1_A 3 LKRVAEAKLPTPWGDFLMVGFEELATGHDHVALVYGDISGHTPVLARVHSECLTGDALFSLRCDCGFQLEAALTQIAEEG 82 (196)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEETTTCCEEEEEEESCCCSSSCEEEEEEECCHHHHTSCCSSCSHHHHHHHHHHHHHHHT
T ss_pred eEEEEEEEecCCCeeEEEEEEEECCCCcEEEEEEeCCCCCCCccEEEEeccCChHHHhCCCCCCChHHHHHHHHHHHHhC
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEEEeCCCCCCcchHHHhhhhhcccCCCCchhhhhhcCCCCCccChhHHHHHHHHcCCCeeeeccCCcccccccccC
Q 018477 213 RGVLVYLRGHEGRGIGLGHKLRAYNLQDDGHDTVEANEELGLPVDSREYGIGAQILRDLGVRTMKLMTNNPSKYVGLKGY 292 (355)
Q Consensus 213 ~GVlvYLr~qEgrgiGl~~kl~ay~lq~~g~dt~~An~~lg~~~D~RdygigAqILrdLGV~~irLLTNnP~K~~aL~g~ 292 (355)
+||||||| ||||||||.+|+++|.||++|.||++||.++||+.|+|+||+|||||++|||++||||||||+|+.+|++|
T Consensus 83 ~GVlvyLr-qegrgigL~~kl~ay~lqd~g~dt~~an~~lg~~~d~R~ygigAqIL~dLGV~~irLLTnnp~K~~~L~g~ 161 (196)
T 2bz1_A 83 RGILLYHR-QEGRNIGLLNKIRAYALQDQGYDTVEANHQLGFAADERDFTLCADMFKLLGVNEVRLLTNNPKKVEILTEA 161 (196)
T ss_dssp SEEEEEEC-CHHHHTCHHHHHHHHHHHHTTCCHHHHHHHTTCCSCCCCTHHHHHHHHHTTCCSEEEECSCHHHHHHHHHT
T ss_pred CEEEEEEC-CCCcchhHHHHHHHHhhhccCCcccccccccCCCCccccHHHHHHHHHHcCCCcEEccCCCCccccccccC
Confidence 99999998 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEeecCCCCCcchHHHHHHHHHhcCCCCC
Q 018477 293 GLAIAGRIPLLTPITMENKRYLETKRAKMGHVYG 326 (355)
Q Consensus 293 GieV~ervpl~~~~~~~n~~yl~tK~~~~gH~l~ 326 (355)
||+|++++|++.++|++|++||+||++||||+|+
T Consensus 162 GleVve~v~~~~~~~~~n~~yl~tk~~~~gh~l~ 195 (196)
T 2bz1_A 162 GINIVERVPLIVGRNPNNEHYLDTKAEKMGHLLN 195 (196)
T ss_dssp TCCEEEEECCCC----------------------
T ss_pred CeEEEEEEccCCCCCccchhHHHhhHHhhCCCCC
Confidence 9999999999999999999999999999999984
No 2
>1k4i_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesi antimicrobial target, structure-based design, isomerase; 0.98A {Magnaporthe grisea} SCOP: d.115.1.2 PDB: 1k49_A 1k4l_A 1k4o_A 1k4p_A
Probab=100.00 E-value=7.7e-49 Score=364.34 Aligned_cols=129 Identities=44% Similarity=0.594 Sum_probs=124.7
Q ss_pred eeecCCceEEEEecC-CCCCCCChHHHHHHHHHHHcCCCCCCccccCcccceeeeecCCcccccchhHHHHHHHHHhCCC
Q 018477 6 IFFLSTKLFGFDAKY-GTTTGVSANDRAKTVLALACRDSKPEDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGLE 84 (355)
Q Consensus 6 ~~~~~~ftvsvda~~-g~~TGISa~dRa~Tir~la~~~~~~~df~~PGHv~Pl~a~~ggvl~R~GhtEaavdL~rlAgl~ 84 (355)
+-...+|||||||++ |++|||||.|||+|||.|++++++|+||+||||||||++++|||++|+||||||||||||||+.
T Consensus 88 ~~~~TaFTVsVda~~~g~tTGISA~DRa~Tir~la~~~~~p~df~rPGHvfPL~A~~GGVl~R~GHTEAaVDLarLAGl~ 167 (233)
T 1k4i_A 88 DPRGTAYTVSVDAEHPSTTTGISAHDRALACRMLAAPDAQPSHFRRPGHVFPLRAVAGGVRARRGHTEAGVELCRLAGKR 167 (233)
T ss_dssp CSSCCCBBCCEEECSTTCSSSCSHHHHHHHHHHHHCTTCCGGGEEEEEEEEEEECCTTHHHHCCSHHHHHHHHHHHTTCC
T ss_pred CCCCCCeEEEEEcccCCCCCCcCHHHHHHHHHHHhCCCCCHHHcCCCCccceeeecCCCeeccCChHHHHHHHHHHcCCC
Confidence 446789999999998 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEEEeCC-----------CCcccChhHHHHHHHhcCCeEEehhhHHHHHhhhhhhhh
Q 018477 85 PVAVLCEIVDD-----------DGSMARLPKLRQFAQTENLKIISIADLIRYRRKRDRLVE 134 (355)
Q Consensus 85 Paavi~ei~~~-----------dg~~a~~~~~~~fA~~h~L~ivti~dli~yr~~~E~lV~ 134 (355)
|++|||||+++ ||+|||++++.+||++||||++||+|||+||.++|++|+
T Consensus 168 PagVicEi~~~~~~~~~~~~~~dG~mar~~~l~~fA~~h~L~iitI~dLi~yr~~~e~~v~ 228 (233)
T 1k4i_A 168 PVAVISEIVDDGQEVEGRAVRAAPGMLRGDECVAFARRWGLKVCTIEDMIAHVEKTEGKLE 228 (233)
T ss_dssp SBEEEEEBEECCEECTTSSCEESCEECCHHHHHHHHHHTTCEEEEHHHHHHHHHHHHCCC-
T ss_pred ceEEEEEeCCCcccccccccCCCCCcCCHHHHHHHHHHcCCcEEEHHHHHHHHHhcCCeec
Confidence 99999999999 999999999999999999999999999999999998875
No 3
>3mio_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin, ribulose-5-phosphate, FAD, FMN; 1.80A {Mycobacterium tuberculosis} SCOP: d.115.1.0 PDB: 3mgz_A 3mk5_A
Probab=100.00 E-value=1.3e-48 Score=358.05 Aligned_cols=125 Identities=50% Similarity=0.788 Sum_probs=116.5
Q ss_pred eeecCCceEEEEecCCCCCCCChHHHHHHHHHHHcCCCCCCccccCcccceeeeecCCcccccchhHHHHHHHHHhCCCC
Q 018477 6 IFFLSTKLFGFDAKYGTTTGVSANDRAKTVLALACRDSKPEDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGLEP 85 (355)
Q Consensus 6 ~~~~~~ftvsvda~~g~~TGISa~dRa~Tir~la~~~~~~~df~~PGHv~Pl~a~~ggvl~R~GhtEaavdL~rlAgl~P 85 (355)
+-...+|||||||++|++|||||.|||+||++|++|+++|+||++|||||||++++|||++|+||||||||||||||+.|
T Consensus 80 ~~~~taftvsvda~~g~tTGISA~DRa~Ti~~ladp~~~p~Df~rPGHvfPL~A~~gGvl~R~GhTEaavdLarlAGl~P 159 (206)
T 3mio_A 80 DKHGTAYTVTVDARNGIGTGISASDRATTMRLLADPTSVADDFTRPGHVVPLRAKDGGVLRRPGHTEAAVDLARMAGLQP 159 (206)
T ss_dssp -------CCCEEESSSCSSSCSHHHHHHHHHHHHCTTCCGGGEEEEEEEEEEECCTTGGGTCCCHHHHHHHHHHHTTSCS
T ss_pred CCCCCCeEEEEecCCCCCCCcCHHHHHHHHHHHhCCCCCHHHhCCCCCceeEeeCCCCcccCCChHHHHHHHHHHcCCCc
Confidence 34678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEEE--eCCCCcccChhHHHHHHHhcCCeEEehhhHHHHHhhhh
Q 018477 86 VAVLCEI--VDDDGSMARLPKLRQFAQTENLKIISIADLIRYRRKRD 130 (355)
Q Consensus 86 aavi~ei--~~~dg~~a~~~~~~~fA~~h~L~ivti~dli~yr~~~E 130 (355)
++||||| +++||+|||.+++.+||++||||++||+|||+||.++|
T Consensus 160 a~vicEiv~~~~dG~mar~~~l~~fA~~h~l~~iti~dli~yr~~~e 206 (206)
T 3mio_A 160 AGAICEIVSQKDEGSMAHTDELRVFADEHGLALITIADLIEWRRKHE 206 (206)
T ss_dssp BEEEEEBBCSSSTTSBCCHHHHHHHHHHHTCEEEEHHHHHHHHHHTC
T ss_pred eEEEEEEeeeCCCCCcCCHHHHHHHHHHcCCcEEEHHHHHHHHHhcC
Confidence 9999999 99999999999999999999999999999999998775
No 4
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Probab=100.00 E-value=3.3e-48 Score=354.70 Aligned_cols=124 Identities=47% Similarity=0.690 Sum_probs=117.4
Q ss_pred eEeeecCCceEEEEecCCCCCCCChHHHHHHHHHHHcCCCCCCccccCcccceeeeecCCcccccchhHHHHHHHHHhCC
Q 018477 4 AIIFFLSTKLFGFDAKYGTTTGVSANDRAKTVLALACRDSKPEDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGL 83 (355)
Q Consensus 4 ~~~~~~~~ftvsvda~~g~~TGISa~dRa~Tir~la~~~~~~~df~~PGHv~Pl~a~~ggvl~R~GhtEaavdL~rlAgl 83 (355)
|-+-+..+|||||||++|++|||||.|||+||+.|++++++|+||+||||||||+|++|||++|+||||||||||||||+
T Consensus 79 n~~~~~taFtVsVda~~g~tTGISA~DRa~Ti~~l~~~~~~p~df~rPGHvfPL~A~~gGvl~R~GHTEAavdLarLAGl 158 (204)
T 1tks_A 79 RSDRHGTAYTITCDFAEGTTTGISAHDRALTTRSLANPNSKPQDFIKPGHILPLRAVPGLLKKRRGHTEAAVQLSTLAGL 158 (204)
T ss_dssp -----CCCBBCCEEESTTCSSSCSHHHHHHHHHHHHCTTCCGGGEEEEEEEEEEEECTTGGGTCCCHHHHHHHHHHHTTS
T ss_pred cCCCCCCCeEEEEeccCCCCCCcCHHHHHHHHHHHhCCCCCHHHcCCCCCcceeeecCCCCccCCCcHHHHHHHHHHcCC
Confidence 33455789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEEEe-CCCCcccChhHHHHHHHhcCCeEEehhhHHHHHh
Q 018477 84 EPVAVLCEIV-DDDGSMARLPKLRQFAQTENLKIISIADLIRYRR 127 (355)
Q Consensus 84 ~Paavi~ei~-~~dg~~a~~~~~~~fA~~h~L~ivti~dli~yr~ 127 (355)
.|++|||||+ ++||+|||++++.+||++||||++||+|||+||+
T Consensus 159 ~Pa~vicEi~~~~dG~mar~~~l~~fA~~h~l~iiti~dLi~yr~ 203 (204)
T 1tks_A 159 QPAGVICELVRDEDGLMMRLDDCIQFGKKHGIKIININQLVEYIS 203 (204)
T ss_dssp CSBEEEEEBBCTTTCCBCBHHHHHHHHHHHTCCEEEHHHHHHHHC
T ss_pred CceEEEEEEeECCCCCcCCHHHHHHHHHHcCCcEEEHHHHHHHHh
Confidence 9999999999 8999999999999999999999999999999985
No 5
>1snn_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, isomerase; HET: 5RP; 1.55A {Methanocaldococcus jannaschii} SCOP: d.115.1.2 PDB: 1pvy_A* 1pvw_A
Probab=100.00 E-value=9e-48 Score=356.84 Aligned_cols=120 Identities=34% Similarity=0.493 Sum_probs=115.7
Q ss_pred ecCCceEEEEecCCCCCCCChHHHHHHHHHHHc------CCCCCCccccCcccceeeeecCCcccccchhHHHHHHHHHh
Q 018477 8 FLSTKLFGFDAKYGTTTGVSANDRAKTVLALAC------RDSKPEDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLA 81 (355)
Q Consensus 8 ~~~~ftvsvda~~g~~TGISa~dRa~Tir~la~------~~~~~~df~~PGHv~Pl~a~~ggvl~R~GhtEaavdL~rlA 81 (355)
...+|||||||++ ++|||||.|||+|||+|++ ++++|+||++|||||||+|++|||++|+|||||||||||||
T Consensus 97 ~~TaFtvsVd~~~-~tTGISA~DRa~Tir~la~~~~~~~~~~~~~df~rPGHVfPL~A~~gGVl~R~GHTEaaVdLarlA 175 (227)
T 1snn_A 97 EKSSFSITINHRK-TFTGITDNDRAFTIKKLAELVKEGRFNDFGKEFRSPGSVTLLRAAEGLVKNRQGHTEMTVALAELA 175 (227)
T ss_dssp SSCCEEEEEEETT-CSSSCSHHHHHHHHHHHHHHHHTTCGGGHHHHEEEEEEEEEEECCTTGGGTCCSHHHHHHHHHHHT
T ss_pred CCCCcEEEEEcCC-CCCCCCHHHHHHHHHHHHhhhcccCCCCCHHHcCCCCCceeEEeCCCCEeeCCCchHHHHHHHHHc
Confidence 5678999999985 9999999999999999999 99999999999999999999999999999999999999999
Q ss_pred CCCCcEEEEEEeCCCCcccChhHHHHHHHhcCCeEEehhhHHHHHhh
Q 018477 82 GLEPVAVLCEIVDDDGSMARLPKLRQFAQTENLKIISIADLIRYRRK 128 (355)
Q Consensus 82 gl~Paavi~ei~~~dg~~a~~~~~~~fA~~h~L~ivti~dli~yr~~ 128 (355)
|+.|++||||||++||+|||++++++||++||||++||+|||+||.+
T Consensus 176 Gl~Pa~VicEi~~ddG~mar~~~l~~fA~~h~l~~iti~dLi~yr~~ 222 (227)
T 1snn_A 176 NLVPITTICEMMGDDGNAMSKNETKRYAEKHNLIYLSGEEIINYYLD 222 (227)
T ss_dssp TSCSEEEEEEEBCTTSSBCCHHHHHHHHHHHTCCEEEHHHHHHHC--
T ss_pred CCCceEEEEEEeCCCCCcCCHHHHHHHHHHcCCcEEEHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999976
No 6
>1g57_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavine biosynthesis, skeletal rearrangement, antimicrobial target; 1.40A {Escherichia coli} SCOP: d.115.1.2 PDB: 1g58_A 1iez_A 3ls6_A 3lrj_A 3lqu_A 3h07_A
Probab=100.00 E-value=2.3e-46 Score=345.98 Aligned_cols=127 Identities=47% Similarity=0.812 Sum_probs=121.9
Q ss_pred eeecCCceEEEEecCCCCCCCChHHHHHHHHHHHcCCCCCCccccCcccceeeeecCCcccccchhHHHHHHHHHhCCCC
Q 018477 6 IFFLSTKLFGFDAKYGTTTGVSANDRAKTVLALACRDSKPEDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGLEP 85 (355)
Q Consensus 6 ~~~~~~ftvsvda~~g~~TGISa~dRa~Tir~la~~~~~~~df~~PGHv~Pl~a~~ggvl~R~GhtEaavdL~rlAgl~P 85 (355)
+....+|||||||++|++|||||.||+.||+.|++++++|.||++|||||||++++|||++|+|||||||||||||||.|
T Consensus 89 ~~~~taftVsvda~~g~tTGISa~DRa~Ti~~lad~~~~~~Df~~PGHvfPL~A~~gGvl~R~GhTEAavdLarLAGl~P 168 (217)
T 1g57_A 89 SAYGTGFTVTIEAAEGVTTGVSAADRITTVRAAIADGAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDLMTLAGFKP 168 (217)
T ss_dssp CTTCCCBBSCEEESSSCSSSCSHHHHHHHHHHHHSTTCCGGGEEEEEEEEEEECCTTGGGTCCSHHHHHHHHHHHTTSCS
T ss_pred CcCCCceEEeeccccCCCCCcCHHHHHHHHHHHhCCCCCHHHcCCCCCccceeecCCCcccCCCcHHHHHHHHHHcCCCc
Confidence 34578999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEEEeCCCCcccChhHHHHHHHhcCCeEEehhhHHHHHhhhhhh
Q 018477 86 VAVLCEIVDDDGSMARLPKLRQFAQTENLKIISIADLIRYRRKRDRL 132 (355)
Q Consensus 86 aavi~ei~~~dg~~a~~~~~~~fA~~h~L~ivti~dli~yr~~~E~l 132 (355)
++|||||+++||+|++.+++.+||++||||++||+||++||.++|+.
T Consensus 169 a~vicEi~~~dG~mar~~~l~~fA~~h~l~~iti~dLi~yr~~~e~~ 215 (217)
T 1g57_A 169 AGVLCELTNDDGTMARAPECIEFANKHNMALVTIEDLVAYRQAHERK 215 (217)
T ss_dssp CEEEEEBBCTTSSBCCHHHHHHHHHHTTCEEEEHHHHHHHHHHHC--
T ss_pred eEEEEEEeCCCCCccCHHHHHHHHHHcCCCEEEHHHHHHHHHhcccc
Confidence 99999999999999999999999999999999999999999998864
No 7
>3ct4_A PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit DHAK; dihydroxyacetone kinase subunit, tranferase; 2.50A {Lactococcus lactis subsp}
Probab=78.95 E-value=1.6 Score=42.51 Aligned_cols=92 Identities=18% Similarity=0.244 Sum_probs=61.8
Q ss_pred EEEEeCCCCceEEEEEECcCCCCCcceE-E----eccCCccccccCCCCCCChHHHHHHHHHHHHcCCEEEEEEeCCCCC
Q 018477 151 HCYRSLLDGIEHIAMVKGEIGDGQDILV-R----VHSECLTGDIFGSARCDCGNQLALAMKQIEAAGRGVLVYLRGHEGR 225 (355)
Q Consensus 151 ~~y~~~~~g~eH~ALv~Gdi~~~~~vlV-R----VHS~cltgDvfgs~~CdCg~qL~~Al~~Ia~~G~GVlvYLr~qEgr 225 (355)
+.|+.... ...++||-|-=++.+|... - +=+.+..||+|-|.. .+|.-+|++.+. .|.|||+..-|-.
T Consensus 37 vv~r~~~~-~~KValISGGGSGHEPahaGfVG~GMLdAAv~G~VFaSPs---~~qi~~aikav~-~g~GvL~ivkNYt-- 109 (332)
T 3ct4_A 37 IIQRKSPK-SGKVALVSGGGSGHEPAHAGFVGEGMLSAAVCGAIFTSPT---PDQIYEAIKSAD-EGAGVLLIIKNYL-- 109 (332)
T ss_dssp EEEECSCC-CSCCEEEEEEEESSTTTTGGGBSBTSBSEEEEEEETCCCC---HHHHHHHHHHHC-CSSCEEEEEESCH--
T ss_pred EEEeCCCC-CCcEEEEecCCccccccccccccCCccceeeecccCCCCC---HHHHHHHHHhhc-CCCCEEEEeCCcH--
Confidence 44554433 3568999875444455211 0 223467899999876 679999998874 5679988776322
Q ss_pred CcchHHHhhhhhcccCCCCchhhhhhcCCCCCccChhHHHHHHHHcCCC-eeeec
Q 018477 226 GIGLGHKLRAYNLQDDGHDTVEANEELGLPVDSREYGIGAQILRDLGVR-TMKLM 279 (355)
Q Consensus 226 giGl~~kl~ay~lq~~g~dt~~An~~lg~~~D~RdygigAqILrdLGV~-~irLL 279 (355)
-|--+|++|++.++.-|++ ++-+.
T Consensus 110 ------------------------------GDvlNF~mAaE~a~~eGi~v~~VvV 134 (332)
T 3ct4_A 110 ------------------------------GDVMNFEMAREMAEMEEIKVEQIIV 134 (332)
T ss_dssp ------------------------------HHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred ------------------------------HHhhcHHHHHHHHHhcCCcEEEEEe
Confidence 2566899999999999987 44443
No 8
>1oi2_A Hypothetical protein YCGT; kinase, dihydroxyacetone kinase; 1.75A {Escherichia coli} SCOP: c.119.1.2 PDB: 1oi3_A 1uod_A* 1uoe_A 3pnl_A* 3pnk_A* 3pno_A 3pnq_A 3pnm_A
Probab=77.18 E-value=1.7 Score=42.83 Aligned_cols=93 Identities=20% Similarity=0.319 Sum_probs=61.2
Q ss_pred EEEEeCCCCceEEEEEECcCCCCCcceE-E----eccCCccccccCCCCCCChHHHHHHHHHHHHcCCEEEEEEeCCCCC
Q 018477 151 HCYRSLLDGIEHIAMVKGEIGDGQDILV-R----VHSECLTGDIFGSARCDCGNQLALAMKQIEAAGRGVLVYLRGHEGR 225 (355)
Q Consensus 151 ~~y~~~~~g~eH~ALv~Gdi~~~~~vlV-R----VHS~cltgDvfgs~~CdCg~qL~~Al~~Ia~~G~GVlvYLr~qEgr 225 (355)
++++........++||.|-=++.+|... - +=+.+..||+|-|.. .+|.-+|++.+. .|.|||+.+.|-.
T Consensus 44 vv~r~~~~~~~KValiSGGGSGHEPah~GfVG~GMLdaAv~G~VFaSPs---~~qi~~ai~av~-~g~GvL~ivkNYt-- 117 (366)
T 1oi2_A 44 YVTRADAPVAGKVALLSGGGSGHEPMHCGYIGQGMLSGACPGEIFTSPT---PDKIFECAMQVD-GGEGVLLIIKNYT-- 117 (366)
T ss_dssp EEEETTCSCTTSCEEEEEEEESSTTTTGGGBSBTSBSEEEEEEETSCCC---HHHHHHHHHHHC-CSSCEEEEEESSH--
T ss_pred EEEeCCCCCCCcEEEEecCCccccccccccccCCccceeeecccCCCCC---HHHHHHHHHhhc-CCCCEEEEeCCcH--
Confidence 4455443323468888875444455211 0 223467899999876 678888888764 5679998876322
Q ss_pred CcchHHHhhhhhcccCCCCchhhhhhcCCCCCccChhHHHHHHHHcCCC-eeeec
Q 018477 226 GIGLGHKLRAYNLQDDGHDTVEANEELGLPVDSREYGIGAQILRDLGVR-TMKLM 279 (355)
Q Consensus 226 giGl~~kl~ay~lq~~g~dt~~An~~lg~~~D~RdygigAqILrdLGV~-~irLL 279 (355)
-|--+|++|++.++.-||+ ++-+.
T Consensus 118 ------------------------------GDvlNF~mA~E~a~~eGi~v~~Vvv 142 (366)
T 1oi2_A 118 ------------------------------GDILNFETATELLHDSGVKVTTVVI 142 (366)
T ss_dssp ------------------------------HHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred ------------------------------HHhhcHHHHHHHHHhcCCcEEEEEe
Confidence 2566899999999999987 34443
No 9
>2iu4_A DHA-DHAQ, dihydroxyacetone kinase; transferase, CO-activa kinase; HET: HIQ; 1.96A {Lactococcus lactis} PDB: 2iu6_A
Probab=71.34 E-value=2.3 Score=41.47 Aligned_cols=92 Identities=18% Similarity=0.370 Sum_probs=60.4
Q ss_pred EEEEeCCCCceEEEEEECcCCCCCcceE-E----eccCCccccccCCCCCCChHHHHHHHHHHHHcCCEEEEEEeCCCCC
Q 018477 151 HCYRSLLDGIEHIAMVKGEIGDGQDILV-R----VHSECLTGDIFGSARCDCGNQLALAMKQIEAAGRGVLVYLRGHEGR 225 (355)
Q Consensus 151 ~~y~~~~~g~eH~ALv~Gdi~~~~~vlV-R----VHS~cltgDvfgs~~CdCg~qL~~Al~~Ia~~G~GVlvYLr~qEgr 225 (355)
+.|+.... ...++||-|-=++-+|... - +=+.+..||+|-|.. .+|.-+|++.+. .|.|||+...|-.
T Consensus 33 vv~r~~~~-~~KValISGGGSGHEPahaGfVG~GMLdAAv~G~VFaSPs---~~qi~~aikav~-~g~GvL~ivkNYt-- 105 (336)
T 2iu4_A 33 ILYDNTYN-EKTVPIISGGGSGHEPAHVGYVGSGMLAAAVTGPLFIPPK---SKNILKAIRQVN-SGKGVFVIIKNFE-- 105 (336)
T ss_dssp EEEETTCC-SSSCCEEEEEEESSTTTTGGGBSTTSBSEEEEEEETSCCC---HHHHHHHHHHHC-SSSCEEEEEESCH--
T ss_pred EEEeCCCC-CCcEEEEecCCccccccccccccCCccceeeecccCCCCC---HHHHHHHHHhhc-CCCCEEEEeCCcH--
Confidence 34444332 3457888865444444211 0 223467899999876 679999998875 5679988776322
Q ss_pred CcchHHHhhhhhcccCCCCchhhhhhcCCCCCccChhHHHHHHHHcCCC-eeeec
Q 018477 226 GIGLGHKLRAYNLQDDGHDTVEANEELGLPVDSREYGIGAQILRDLGVR-TMKLM 279 (355)
Q Consensus 226 giGl~~kl~ay~lq~~g~dt~~An~~lg~~~D~RdygigAqILrdLGV~-~irLL 279 (355)
-|--+|++|++.++.-|++ ++-+.
T Consensus 106 ------------------------------GDvlNF~mAaE~a~~eGi~v~~VvV 130 (336)
T 2iu4_A 106 ------------------------------ADLKEFNEAIKEARTEGIDVRYIVS 130 (336)
T ss_dssp ------------------------------HHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred ------------------------------HHhhcHHHHHHHHHhCCCcEEEEEe
Confidence 2567899999999999987 44444
No 10
>1un8_A Dihydroxyacetone kinase; transferase; HET: MYY; 2.5A {Citrobacter freundii} SCOP: a.208.1.1 c.119.1.2 PDB: 1un9_A*
Probab=60.09 E-value=5 Score=41.52 Aligned_cols=92 Identities=21% Similarity=0.356 Sum_probs=61.7
Q ss_pred EEEEeCCCCceEEEEEECcCCCCCcceE-E----eccCCccccccCCCCCCChHHHHHHHHHHHHcCCEEEEEEeCCCCC
Q 018477 151 HCYRSLLDGIEHIAMVKGEIGDGQDILV-R----VHSECLTGDIFGSARCDCGNQLALAMKQIEAAGRGVLVYLRGHEGR 225 (355)
Q Consensus 151 ~~y~~~~~g~eH~ALv~Gdi~~~~~vlV-R----VHS~cltgDvfgs~~CdCg~qL~~Al~~Ia~~G~GVlvYLr~qEgr 225 (355)
++|+..... ..++||-|-=++.+|-.. . +=+.|..||||-|.. ..|.-.|++.+. .|.|||+...|-.
T Consensus 40 vv~r~~~~~-~kV~lisGGGSGHEP~h~G~VG~Gml~aav~G~vFaSPs---~~~i~~ai~a~~-~g~Gvl~ivkNYt-- 112 (552)
T 1un8_A 40 IVVRRDLNK-NNVAVISGGGSGHEPAHVGFIGKGMLTAAVCGDVFASPS---VDAVLTAIQAVT-GEAGCLLIVKNYT-- 112 (552)
T ss_dssp EEEESCCCT-TSCEEEEEEEESSTTTTGGGBSTTSBSEEEEEEETSCCC---HHHHHHHHHHHC-CTTCEEEEEESCH--
T ss_pred eEEecCCCC-CceEEEeCCCCCCCccccccccCCccceeeecCcCCCCC---HHHHHHHHHhhc-CCCCEEEEecccH--
Confidence 445544332 568899875444455311 1 223467899999876 579999998865 5679998876322
Q ss_pred CcchHHHhhhhhcccCCCCchhhhhhcCCCCCccChhHHHHHHHHcCCC-eeeec
Q 018477 226 GIGLGHKLRAYNLQDDGHDTVEANEELGLPVDSREYGIGAQILRDLGVR-TMKLM 279 (355)
Q Consensus 226 giGl~~kl~ay~lq~~g~dt~~An~~lg~~~D~RdygigAqILrdLGV~-~irLL 279 (355)
-|--+|+++++.++.-||+ ++-+.
T Consensus 113 ------------------------------GD~lnF~~A~e~a~~~gi~v~~v~v 137 (552)
T 1un8_A 113 ------------------------------GDRLNFGLAAEKARRLGYNVEMLIV 137 (552)
T ss_dssp ------------------------------HHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred ------------------------------HHHhhHHHHHHHHHhcCCcEEEEEe
Confidence 2566899999999999987 44443
No 11
>3n2l_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, infectious diseases; 2.10A {Vibrio cholerae}
Probab=58.44 E-value=27 Score=32.01 Aligned_cols=76 Identities=18% Similarity=0.281 Sum_probs=51.2
Q ss_pred CcccceeeeecCCcccccchhHHHHHHHHHhCCCCcEEEEEEeCCCCcccChhHHHHHHHhcCCeEE---ehhhHHHHHh
Q 018477 51 PGHIFPLKYREGGVLKRAGHTEASVDLAVLAGLEPVAVLCEIVDDDGSMARLPKLRQFAQTENLKII---SIADLIRYRR 127 (355)
Q Consensus 51 PGHv~Pl~a~~ggvl~R~GhtEaavdL~rlAgl~Paavi~ei~~~dg~~a~~~~~~~fA~~h~L~iv---ti~dli~yr~ 127 (355)
|| ..|...+ ++.--+-..+++++++-+|...++++|-+--.+|---.....+++.+++|+|+. +++||++|..
T Consensus 142 ~G--~VliVDD--vitTG~T~~~a~~~l~~~Ga~vv~v~vlvdr~egG~~~l~a~~~~~~~~Gv~v~SL~~~~~l~~~~~ 217 (238)
T 3n2l_A 142 EG--RVMLVDD--VITAGTAIRESMELIQANKADLAGVLVAIDRQEKGKGELSAIQEVERDFGCAVISIVSLTDLITYLE 217 (238)
T ss_dssp CS--EEEEECS--CCSSSHHHHHHHHHHHHTTCEEEEEEEEEECCCBCSSSSBHHHHHHHHHCCEEEEEEEHHHHHHHHH
T ss_pred CC--cEEEEee--eecccHHHHHHHHHHHHcCCEEEEEEEEEEcccCccchhhHHHHHHHHcCCCEEEEEEHHHHHHHHH
Confidence 67 3444444 555445567899999999999888887554333322234567778778899865 6778888876
Q ss_pred hhh
Q 018477 128 KRD 130 (355)
Q Consensus 128 ~~E 130 (355)
++.
T Consensus 218 ~~~ 220 (238)
T 3n2l_A 218 QQG 220 (238)
T ss_dssp SSC
T ss_pred HcC
Confidence 543
No 12
>2cyg_A Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (beta-alpha)8-TIM-barrel, B-cell epitopes, allergen, banana, hydrolase; 1.45A {Musa acuminata} SCOP: c.1.8.3
Probab=53.66 E-value=12 Score=35.77 Aligned_cols=42 Identities=12% Similarity=0.195 Sum_probs=37.1
Q ss_pred hhHHHHHHHHcCCCeeeeccCCcccccccccCCceEEEEeec
Q 018477 261 YGIGAQILRDLGVRTMKLMTNNPSKYVGLKGYGLAIAGRIPL 302 (355)
Q Consensus 261 ygigAqILrdLGV~~irLLTNnP~K~~aL~g~GieV~ervpl 302 (355)
-...+++|+.+|+++|||-+.+|.-+.++++.||+|.--|+.
T Consensus 15 ~~~vv~llk~~~i~~vRlY~~d~~vl~A~~~tgi~v~lgv~n 56 (312)
T 2cyg_A 15 PSEVVSLYKSNNIARMRLYDPNQAALQALRNSNIQVLLDVPR 56 (312)
T ss_dssp HHHHHHHHHHTTCCEEEESSCCHHHHHHHTTSCCEEEEEECH
T ss_pred HHHHHHHHHhcCCCEEEEcCCCHHHHHHHHhcCCEEEEeccc
Confidence 334489999999999999999998899999999999988874
No 13
>3em5_A Beta-1,3-glucanase; glycoprotein, rossmann fold, (beta-alpha)8-TIM-barrel, glyco hydrolase, allergen; HET: NAG FUC MAN; 2.50A {Hevea brasiliensis} SCOP: c.1.8.3 PDB: 3f55_A*
Probab=51.44 E-value=8.7 Score=36.95 Aligned_cols=41 Identities=12% Similarity=0.242 Sum_probs=37.0
Q ss_pred hHHHHHHHHcCCCeeeeccCCcccccccccCCceEEEEeec
Q 018477 262 GIGAQILRDLGVRTMKLMTNNPSKYVGLKGYGLAIAGRIPL 302 (355)
Q Consensus 262 gigAqILrdLGV~~irLLTNnP~K~~aL~g~GieV~ervpl 302 (355)
...+++||..||++|||-..+|.=+.+|++-||+|.--||-
T Consensus 17 ~~vv~llks~gi~~VRlYdaD~~vL~Al~~sgi~v~vGV~n 57 (316)
T 3em5_A 17 SEVIALYKKSNITRMRIYDPNQAVLEALRGSNIELILGVPN 57 (316)
T ss_dssp HHHHHHHHHTTCCEEECSSCCHHHHHHHTTCCCEEEEEECG
T ss_pred HHHHHHHHHcCCCEEEEecCCHHHHHHhhcCCceEEEeccc
Confidence 45789999999999999999998899999999999988873
No 14
>1aq0_A 1,3-1,4-beta-glucanase; hydrolase, glycosidase, glycoprotein, glycosylated protein; HET: NAG; 2.00A {Hordeum vulgare} SCOP: c.1.8.3 PDB: 1ghr_A
Probab=51.38 E-value=8.1 Score=36.88 Aligned_cols=42 Identities=17% Similarity=0.352 Sum_probs=37.1
Q ss_pred hhHHHHHHHHcCCCeeeeccCCcccccccccCCceEEEEeec
Q 018477 261 YGIGAQILRDLGVRTMKLMTNNPSKYVGLKGYGLAIAGRIPL 302 (355)
Q Consensus 261 ygigAqILrdLGV~~irLLTNnP~K~~aL~g~GieV~ervpl 302 (355)
-...+++|+..|+++|||-+.+|.-+.+|.+.||+|.--++.
T Consensus 15 ~~~vv~llk~~~i~~VRlY~~d~~vL~A~~~tgi~v~lgv~n 56 (306)
T 1aq0_A 15 ASTVVSMFKSNGIKSMRLYAPNQAALQAVGGTGINVVVGAPN 56 (306)
T ss_dssp HHHHHHHHHHHTCCEEEESSCCHHHHHHHTTSCCEEEEEECG
T ss_pred HHHHHHHHHhcCCCEEEEcCCCHHHHHHHHhcCCEEEEeccc
Confidence 345678999999999999998898899999999999987774
No 15
>1ghs_A 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulgare} SCOP: c.1.8.3
Probab=50.89 E-value=8.3 Score=36.78 Aligned_cols=41 Identities=17% Similarity=0.243 Sum_probs=36.6
Q ss_pred hHHHHHHHHcCCCeeeeccCCcccccccccCCceEEEEeec
Q 018477 262 GIGAQILRDLGVRTMKLMTNNPSKYVGLKGYGLAIAGRIPL 302 (355)
Q Consensus 262 gigAqILrdLGV~~irLLTNnP~K~~aL~g~GieV~ervpl 302 (355)
...+++|+..|+++|||-+.+|.-+.+|++.||+|.--|+.
T Consensus 16 ~~vv~llk~~~i~~vRlY~~d~~vL~A~~~tgi~v~lgv~n 56 (306)
T 1ghs_A 16 SDVVQLYRSKGINGMRIYFADGQALSALRNSGIGLILDIGN 56 (306)
T ss_dssp HHHHHHHHHHTCCEEEESSCCHHHHHHTTTSCCEEEEECCG
T ss_pred HHHHHHHHhcCCCEEEEcCCCHHHHHHHHhcCCEEEEeccc
Confidence 45578999999999999999998899999999999987774
No 16
>4fd4_A Arylalkylamine N-acetyltransferase like 5B; GNAT; 1.95A {Aedes aegypti}
Probab=48.24 E-value=20 Score=29.51 Aligned_cols=38 Identities=11% Similarity=0.112 Sum_probs=31.2
Q ss_pred HHHHHcCCCeeeeccCCcccccccccCCceEEEEeecC
Q 018477 266 QILRDLGVRTMKLMTNNPSKYVGLKGYGLAIAGRIPLL 303 (355)
Q Consensus 266 qILrdLGV~~irLLTNnP~K~~aL~g~GieV~ervpl~ 303 (355)
+..+.+|++.+.+.+.|+.-+.-.+.+|.+.++.++..
T Consensus 153 ~~a~~~g~~~i~~~~~n~~a~~~Y~k~GF~~~~~~~~~ 190 (217)
T 4fd4_A 153 DLSKKLGFKAISGDFTSVFSVKLAEKLGMECISQLALG 190 (217)
T ss_dssp HHHHHHTCSEEEEEECSHHHHHHHHHTTCEEEEEEEGG
T ss_pred HHHHHcCCCEEEEEeCCHHHHHHHHHCCCeEEEeEeHH
Confidence 34567899999998778877777899999999998854
No 17
>3ur8_A Glucan endo-1,3-beta-D-glucosidase; glucoside hydrolase, GH17 family, pathogenesis-related class protein (PR-2), TIM barrel; 1.26A {Solanum tuberosum} PDB: 3ur7_A
Probab=48.15 E-value=10 Score=36.54 Aligned_cols=42 Identities=14% Similarity=0.233 Sum_probs=37.3
Q ss_pred hHHHHHHHHcCCCeeeeccCCcccccccccCCceEEEEeecC
Q 018477 262 GIGAQILRDLGVRTMKLMTNNPSKYVGLKGYGLAIAGRIPLL 303 (355)
Q Consensus 262 gigAqILrdLGV~~irLLTNnP~K~~aL~g~GieV~ervpl~ 303 (355)
...+++||..|+++|||-+.+|.=+.++++.||+|.--||..
T Consensus 18 ~~Vv~llks~gi~~VRlY~~D~~vL~Al~~sgi~V~lGV~n~ 59 (323)
T 3ur8_A 18 QDVIKLYNANNIKKMRIYYPHTNVFNALKGSNIEIILDVPNQ 59 (323)
T ss_dssp HHHHHHHHHTTCCEEEESSCCHHHHHHHTTCCCEEEEEECGG
T ss_pred HHHHHHHHhCCCCeEEecCCCHHHHHHHHhcCCeEEEecccc
Confidence 356789999999999999988988999999999999888853
No 18
>4h89_A GCN5-related N-acetyltransferase; N-acyltransferase superfamily, structural genomics, PSI-BIOL midwest center for structural genomics, MCSG; 1.37A {Kribbella flavida}
Probab=42.73 E-value=25 Score=28.64 Aligned_cols=37 Identities=16% Similarity=0.282 Sum_probs=28.4
Q ss_pred HHHHHcCCCeeeec---cCCcccccccccCCceEEEEeec
Q 018477 266 QILRDLGVRTMKLM---TNNPSKYVGLKGYGLAIAGRIPL 302 (355)
Q Consensus 266 qILrdLGV~~irLL---TNnP~K~~aL~g~GieV~ervpl 302 (355)
+..+.+|++++.|. .+|+.-+.-.+.+|.++++++|-
T Consensus 115 ~~a~~~g~~~~~l~~~~~~N~~A~~~y~k~GF~~~G~~~~ 154 (173)
T 4h89_A 115 DWAGREGFRAIQFNAVVETNTVAVKLWQSLGFRVIGTVPE 154 (173)
T ss_dssp HHHHHTTCSEEEEEEEETTCHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHCCCcEEEEeeecccCHHHHHHHHHCCCEEEEEEcc
Confidence 34678899998763 56776666778999999998873
No 19
>2g3a_A Acetyltransferase; structural genomics, PSI, protein structu initiative, midwest center for structural genomics, MCSG; 1.90A {Agrobacterium tumefaciens str} SCOP: d.108.1.1
Probab=42.33 E-value=8.9 Score=30.10 Aligned_cols=36 Identities=22% Similarity=0.263 Sum_probs=28.3
Q ss_pred HHHHcCCCeeeeccCCcccccccccCCceEEEEeec
Q 018477 267 ILRDLGVRTMKLMTNNPSKYVGLKGYGLAIAGRIPL 302 (355)
Q Consensus 267 ILrdLGV~~irLLTNnP~K~~aL~g~GieV~ervpl 302 (355)
.++..|++++.|.+.|+.-..-.+.+|.+.++..+.
T Consensus 103 ~~~~~g~~~i~l~~~n~~a~~~y~k~GF~~~~~~~~ 138 (152)
T 2g3a_A 103 EARKRGCMGAYIDTMNPDALRTYERYGFTKIGSLGP 138 (152)
T ss_dssp HHHHTTCCEEEEEESCHHHHHHHHHHTCEEEEEECC
T ss_pred HHHHCCCCEEEEEecCccHHHHHHHCCCEEeeeccC
Confidence 356679999999887776677788899998887653
No 20
>3qb8_A A654L protein; GNAT N-acetyltransferase, acetyltransferase, COA, spermine, spermidine, transferase; HET: COA; 1.50A {Paramecium bursaria chlorella virus 1}
Probab=41.75 E-value=29 Score=28.03 Aligned_cols=38 Identities=11% Similarity=0.037 Sum_probs=31.0
Q ss_pred HHHHHHcCCCeeeeccCCcccccccccCCceEEEEeec
Q 018477 265 AQILRDLGVRTMKLMTNNPSKYVGLKGYGLAIAGRIPL 302 (355)
Q Consensus 265 AqILrdLGV~~irLLTNnP~K~~aL~g~GieV~ervpl 302 (355)
.+..+..|+.++.|-++|+.-....+.+|.+.++.++.
T Consensus 133 ~~~a~~~g~~~i~l~~~n~~a~~~y~k~GF~~~~~~~~ 170 (197)
T 3qb8_A 133 IEESSSHGFKYIYGDCTNIISQNMFEKHGFETVGSVKY 170 (197)
T ss_dssp HHHHHHTTCCEEEEEECSHHHHHHHHHTTCEEEEEEES
T ss_pred HHHHHHcCCCEEEEEcCCHHHHHHHHHCCCeEEEEEEE
Confidence 34566789999999988887777789999999998873
No 21
>1tif_A IF3-N, translation initiation factor 3; IF3 N-terminal domain, ribosome binding factor; 1.80A {Geobacillus stearothermophilus} SCOP: d.15.8.1
Probab=39.58 E-value=25 Score=27.18 Aligned_cols=32 Identities=19% Similarity=0.402 Sum_probs=27.2
Q ss_pred EEEEeCCCCc---ccChhHHHHHHHhcCCeEEehh
Q 018477 89 LCEIVDDDGS---MARLPKLRQFAQTENLKIISIA 120 (355)
Q Consensus 89 i~ei~~~dg~---~a~~~~~~~fA~~h~L~ivti~ 120 (355)
.+.+++++|+ .++..++.+.|++.+|-+|-|+
T Consensus 15 eVrli~~~Ge~lGv~~~~eAl~~A~e~~LDLVevs 49 (78)
T 1tif_A 15 EVRLIDQNGDQLGIKSKQEALEIAARRNLDLVLVA 49 (78)
T ss_dssp EEEEECTTSCEEEEEEHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEECCCCcCCCcccHHHHHHHHHHcCCCEEEEC
Confidence 3568899985 4899999999999999998776
No 22
>4e0a_A BH1408 protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG, transferase; 1.80A {Bacillus halodurans} PDB: 4f6a_A*
Probab=38.90 E-value=27 Score=26.92 Aligned_cols=39 Identities=13% Similarity=0.015 Sum_probs=29.6
Q ss_pred HHHHHHcCCCeeeecc--CCcccccccccCCceEEEEeecC
Q 018477 265 AQILRDLGVRTMKLMT--NNPSKYVGLKGYGLAIAGRIPLL 303 (355)
Q Consensus 265 AqILrdLGV~~irLLT--NnP~K~~aL~g~GieV~ervpl~ 303 (355)
.+.++..|+++|.|.+ +|+.-....+.+|.+.+++++..
T Consensus 114 ~~~~~~~g~~~i~l~~~~~n~~a~~~y~k~GF~~~~~~~~~ 154 (164)
T 4e0a_A 114 ISYGKAHQVDAIELDVYDFNDRAKAFYHSLGMRCQKQTMEL 154 (164)
T ss_dssp HHHHHHTTCSEEEEEEETTCHHHHHHHHHTTCEEEEEEEEE
T ss_pred HHHHHHcCCCEEEEEEEcCCHHHHHHHHHcCCEEeceeccC
Confidence 3446678999988764 56666677899999999988864
No 23
>1y9w_A Acetyltransferase; structural genomics, Pro structure initiative, PSI, midwest center for structural GE MCSG; 1.90A {Bacillus cereus} SCOP: d.108.1.1
Probab=38.33 E-value=16 Score=28.27 Aligned_cols=36 Identities=19% Similarity=0.065 Sum_probs=28.5
Q ss_pred HHHHcCCCeeeeccCCcccccccccCCceEEEEeec
Q 018477 267 ILRDLGVRTMKLMTNNPSKYVGLKGYGLAIAGRIPL 302 (355)
Q Consensus 267 ILrdLGV~~irLLTNnP~K~~aL~g~GieV~ervpl 302 (355)
.++..|++.+.|-++|+.-..-.+.+|.+.++..+.
T Consensus 91 ~~~~~g~~~i~~~~~n~~a~~~y~~~Gf~~~~~~~~ 126 (140)
T 1y9w_A 91 IAKEKGCRLILLDSFSFQAPEFYKKHGYREYGVVED 126 (140)
T ss_dssp HHHHTTCCEEEEEEEGGGCHHHHHHTTCEEEEEESS
T ss_pred HHHHcCCCEEEEEcCCHhHHHHHHHCCCEEEEEEcC
Confidence 356689999999887776666678899999988763
No 24
>3te4_A GH12636P, dopamine N acetyltransferase, isoform A; dopamine/acetyl COA, N-acetyltransferase domain; HET: ACO; 1.46A {Drosophila melanogaster} PDB: 3v8i_A*
Probab=37.34 E-value=26 Score=29.63 Aligned_cols=37 Identities=11% Similarity=0.236 Sum_probs=30.5
Q ss_pred HHHHHcCCCeeeeccCCcccccccccCCceEEEEeec
Q 018477 266 QILRDLGVRTMKLMTNNPSKYVGLKGYGLAIAGRIPL 302 (355)
Q Consensus 266 qILrdLGV~~irLLTNnP~K~~aL~g~GieV~ervpl 302 (355)
+.++..|++.+.+.+.|+.-..-.+.+|.+++..++.
T Consensus 152 ~~~~~~g~~~~~~~~~~~~~~~~y~~~Gf~~~~~~~~ 188 (215)
T 3te4_A 152 EYMRENGINVYHVLCSSHYSARVMEKLGFHEVFRMQF 188 (215)
T ss_dssp HHHHHHTCCEEEEEESSHHHHHHHHHTTCEEEEEECG
T ss_pred HHHHHcCCCEEEEEecCHHHHHHHHHCCCEEEEEEEh
Confidence 3566789999998888887666789999999998875
No 25
>1lh0_A OMP synthase; loop closure, monomer closure, orotate phosphoribosyltransferase; HET: ORO PRP; 2.00A {Salmonella typhimurium} SCOP: c.61.1.1 PDB: 1opr_A* 1sto_A* 1oro_A
Probab=34.60 E-value=1.5e+02 Score=25.95 Aligned_cols=75 Identities=16% Similarity=0.300 Sum_probs=47.7
Q ss_pred CcccceeeeecCCcccccchhHHHHHHHHHhCCCCcEEEEEEeCCCCcccChhHHHHHHHhcCCeE---EehhhHHHHHh
Q 018477 51 PGHIFPLKYREGGVLKRAGHTEASVDLAVLAGLEPVAVLCEIVDDDGSMARLPKLRQFAQTENLKI---ISIADLIRYRR 127 (355)
Q Consensus 51 PGHv~Pl~a~~ggvl~R~GhtEaavdL~rlAgl~Paavi~ei~~~dg~~a~~~~~~~fA~~h~L~i---vti~dli~yr~ 127 (355)
+| ..|...+ ++.-=+-..+++++++-+|-..++++|-+--..|--.+.+.+.++-++.|+|+ ++++||+.|..
T Consensus 117 ~g--~VliVDD--vitTG~Tl~~a~~~l~~~Ga~~v~v~~l~dr~~~g~~~l~~~~~~~~~~g~~v~sl~~~~~l~~~~~ 192 (213)
T 1lh0_A 117 QG--RVMLVDD--VITAGTAIRESMEIIQAHGATLAGVLISLDRQERGRGEISAIQEVERDYGCKVISIITLKDLIAYLE 192 (213)
T ss_dssp CS--EEEEECS--CCSSSCHHHHHHHHHHHTTCEEEEEEEEEECCBBCSSSSBHHHHHHHHHCCEEEEEEEHHHHHHHHH
T ss_pred CC--CEEEEEe--cccchHHHHHHHHHHHHCCCeEEEEEEEEEcccCcccchhhHHHHHHHcCCCeEEEEEHHHHHHHHH
Confidence 56 3344444 44433345689999999998877766644333332334566777777788865 46677888876
Q ss_pred hh
Q 018477 128 KR 129 (355)
Q Consensus 128 ~~ 129 (355)
++
T Consensus 193 ~~ 194 (213)
T 1lh0_A 193 EK 194 (213)
T ss_dssp HC
T ss_pred Hc
Confidence 44
No 26
>2j8m_A Acetyltransferase PA4866 from P. aeruginosa; GCN5 family, phosphinothricin, methionine sulfone, methionine sulfoximine; 1.44A {Pseudomonas aeruginosa} PDB: 2bl1_A 2j8n_A 2j8r_A* 1yvo_A
Probab=33.02 E-value=58 Score=25.90 Aligned_cols=57 Identities=30% Similarity=0.475 Sum_probs=38.7
Q ss_pred EEEeCCCCCCcchHHHhhhhhcccCCCCchhhhhhcCCCCCccChhHHHHHHHHcCCCeeeec--cCCcccccccccCCc
Q 018477 217 VYLRGHEGRGIGLGHKLRAYNLQDDGHDTVEANEELGLPVDSREYGIGAQILRDLGVRTMKLM--TNNPSKYVGLKGYGL 294 (355)
Q Consensus 217 vYLr~qEgrgiGl~~kl~ay~lq~~g~dt~~An~~lg~~~D~RdygigAqILrdLGV~~irLL--TNnP~K~~aL~g~Gi 294 (355)
+|+. .+-||-|+..++-.. ..+..+.+|+++|.|. ..|+.-+.-.+..|.
T Consensus 88 ~~V~-p~~rg~Gig~~ll~~---------------------------~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~GF 139 (172)
T 2j8m_A 88 VYVR-DDQRGKGLGVQLLQA---------------------------LIERARAQGLHVMVAAIESGNAASIGLHRRLGF 139 (172)
T ss_dssp EEEC-TTCTTSSHHHHHHHH---------------------------HHHHHHHTTCCEEEEEEETTCHHHHHHHHHTTC
T ss_pred EEEC-hhhcCCCHHHHHHHH---------------------------HHHHHHHCCccEEEEEEcCCCHHHHHHHHHCCC
Confidence 5675 677777777665432 2334567899998874 456655666788898
Q ss_pred eEEEEee
Q 018477 295 AIAGRIP 301 (355)
Q Consensus 295 eV~ervp 301 (355)
+.++..+
T Consensus 140 ~~~g~~~ 146 (172)
T 2j8m_A 140 EISGQMP 146 (172)
T ss_dssp EEEEEEE
T ss_pred EEEeecc
Confidence 8887765
No 27
>3mjd_A Orotate phosphoribosyltransferase; IDP02311, csgid, structural genomics, center for structural genomics of infectious diseases; 1.90A {Francisella tularensis}
Probab=32.80 E-value=67 Score=29.18 Aligned_cols=66 Identities=11% Similarity=0.203 Sum_probs=43.6
Q ss_pred cccccchhHHHHHHHHHhCCCCcEEEEEEeCCC-CcccChhHHHHHHHhcCCeEE---ehhhHHHHHhhh
Q 018477 64 VLKRAGHTEASVDLAVLAGLEPVAVLCEIVDDD-GSMARLPKLRQFAQTENLKII---SIADLIRYRRKR 129 (355)
Q Consensus 64 vl~R~GhtEaavdL~rlAgl~Paavi~ei~~~d-g~~a~~~~~~~fA~~h~L~iv---ti~dli~yr~~~ 129 (355)
++.--+-..+++++++-+|..+++++|-+--.. |.--..+..+++-+++|+|+. +++||+.|...+
T Consensus 145 VitTG~Tl~~a~~~L~~~Ga~vv~v~vlvdr~e~g~~~~~~a~~~~~~~~gv~v~sL~~~~~l~~~~~~~ 214 (232)
T 3mjd_A 145 VMTAGTAFYESYNKLKIINAKIAGVVLSIDRQEKAKDSDISATKKISQDFNIPVLAVTNFESIFEYVKEN 214 (232)
T ss_dssp CCSSSHHHHHHHHHHHTTTCEEEEEEEEEECCBCCTTSSSCHHHHHHHHHCCCEEEEEEHHHHHHHHHHH
T ss_pred eccccHHHHHHHHHHHHCCCEEEEEEEEEECCcCCccccchhHHHHHHHcCCcEEEEEeHHHHHHHHHhh
Confidence 444444566799999999999888877544332 211124566677788899865 567778876543
No 28
>1yr0_A AGR_C_1654P, phosphinothricin acetyltransferase; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.00A {Agrobacterium tumefaciens str} SCOP: d.108.1.1
Probab=29.21 E-value=67 Score=25.63 Aligned_cols=57 Identities=21% Similarity=0.361 Sum_probs=37.6
Q ss_pred EEEeCCCCCCcchHHHhhhhhcccCCCCchhhhhhcCCCCCccChhHHHHHHHHcCCCeeeec--cCCcccccccccCCc
Q 018477 217 VYLRGHEGRGIGLGHKLRAYNLQDDGHDTVEANEELGLPVDSREYGIGAQILRDLGVRTMKLM--TNNPSKYVGLKGYGL 294 (355)
Q Consensus 217 vYLr~qEgrgiGl~~kl~ay~lq~~g~dt~~An~~lg~~~D~RdygigAqILrdLGV~~irLL--TNnP~K~~aL~g~Gi 294 (355)
+|+. .+-||.|+..++-... .+..+.+|+++|.|- ..|+.-....+..|.
T Consensus 89 ~~V~-p~~rg~Gig~~ll~~~---------------------------~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~GF 140 (175)
T 1yr0_A 89 VYVH-KDARGHGIGKRLMQAL---------------------------IDHAGGNDVHVLIAAIEAENTASIRLHESLGF 140 (175)
T ss_dssp EEEC-TTSTTSSHHHHHHHHH---------------------------HHHHHTTTCCEEEEEEETTCHHHHHHHHHTTC
T ss_pred EEEC-ccccCCCHHHHHHHHH---------------------------HHHHHhCCccEEEEEecCCCHHHHHHHHHCCC
Confidence 5665 7777777776654321 233467788888874 345555666788888
Q ss_pred eEEEEee
Q 018477 295 AIAGRIP 301 (355)
Q Consensus 295 eV~ervp 301 (355)
+.++..+
T Consensus 141 ~~~g~~~ 147 (175)
T 1yr0_A 141 RVVGRFS 147 (175)
T ss_dssp EEEEEEE
T ss_pred EEEEEcc
Confidence 8887765
No 29
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=29.02 E-value=62 Score=31.74 Aligned_cols=47 Identities=19% Similarity=0.188 Sum_probs=36.6
Q ss_pred hHHHHHHHHHhCCCCcEEEEEEe-CCCCcccChhHHHHHHHhcCCeEE
Q 018477 71 TEASVDLAVLAGLEPVAVLCEIV-DDDGSMARLPKLRQFAQTENLKII 117 (355)
Q Consensus 71 tEaavdL~rlAgl~Paavi~ei~-~~dg~~a~~~~~~~fA~~h~L~iv 117 (355)
-|.+++=.+..|..|.+|++... +..|.....+++.++|++||+.++
T Consensus 246 L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~l~~I~~la~~~g~~l~ 293 (515)
T 2jis_A 246 LERQIGMAEAEGAVPFLVSATSGTTVLGAFDPLEAIADVCQRHGLWLH 293 (515)
T ss_dssp HHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHhCCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHcCCeEE
Confidence 34455444446778999888776 457999999999999999999876
No 30
>2wfu_B Probable insulin-like peptide 5 B chain; cleavage on PAIR of basic residues, signaling protein; 1.85A {Drosophila melanogaster} PDB: 2wfv_B
Probab=28.93 E-value=31 Score=21.28 Aligned_cols=17 Identities=24% Similarity=0.434 Sum_probs=14.1
Q ss_pred CChHHHHHHHHHHHHcC
Q 018477 196 DCGNQLALAMKQIEAAG 212 (355)
Q Consensus 196 dCg~qL~~Al~~Ia~~G 212 (355)
-||++|.+||..|=..|
T Consensus 5 lCG~~L~eaL~~vC~~G 21 (26)
T 2wfu_B 5 ACGPALMDMLRVACPNG 21 (26)
T ss_dssp CCHHHHHHHHHHHCSSC
T ss_pred hhhHHHHHHHHHHHhcc
Confidence 48999999999986554
No 31
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=28.79 E-value=72 Score=30.76 Aligned_cols=49 Identities=16% Similarity=0.219 Sum_probs=37.6
Q ss_pred chhHHHHHHHHHhCCCCcEEEEEEe-CCCCcccChhHHHHHHHhcCCeEE
Q 018477 69 GHTEASVDLAVLAGLEPVAVLCEIV-DDDGSMARLPKLRQFAQTENLKII 117 (355)
Q Consensus 69 GhtEaavdL~rlAgl~Paavi~ei~-~~dg~~a~~~~~~~fA~~h~L~iv 117 (355)
-.-|.+++=...+|..|.+|++..- +..|.....+++.++|++||+.++
T Consensus 220 ~~L~~~i~~~~~~g~~p~~vv~~~~~n~tG~~~~l~~I~~la~~~~~~lh 269 (486)
T 1js3_A 220 SALQEALERDKAAGLIPFFVVATLGTTSCCSFDNLLEVGPICHEEDIWLH 269 (486)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCCHHHHHHHHHHcCCEEE
Confidence 3455666555567888877777655 467999999999999999999876
No 32
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=28.64 E-value=72 Score=29.08 Aligned_cols=35 Identities=14% Similarity=0.171 Sum_probs=27.6
Q ss_pred CCCcEEEEEEe-CCCCcccC---hhHHHHHHHhcCCeEE
Q 018477 83 LEPVAVLCEIV-DDDGSMAR---LPKLRQFAQTENLKII 117 (355)
Q Consensus 83 l~Paavi~ei~-~~dg~~a~---~~~~~~fA~~h~L~iv 117 (355)
-.+.+++++-. |..|..++ ..++.++|++||+.+|
T Consensus 153 ~~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li 191 (375)
T 3op7_A 153 PTTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYIL 191 (375)
T ss_dssp TTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEE
T ss_pred cCCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEE
Confidence 35677776644 55788888 8888999999999887
No 33
>2jlm_A Putative phosphinothricin N-acetyltransferase; methionine sulfoximine; 2.35A {Acinetobacter baylyi}
Probab=28.00 E-value=76 Score=25.82 Aligned_cols=35 Identities=17% Similarity=0.064 Sum_probs=26.2
Q ss_pred HHHHcCCCeeee--ccCCcccccccccCCceEEEEee
Q 018477 267 ILRDLGVRTMKL--MTNNPSKYVGLKGYGLAIAGRIP 301 (355)
Q Consensus 267 ILrdLGV~~irL--LTNnP~K~~aL~g~GieV~ervp 301 (355)
..+.+|+++|.| ...|+.-+.-.+.+|.+..+..+
T Consensus 118 ~a~~~g~~~i~l~v~~~N~~a~~~yek~GF~~~g~~~ 154 (182)
T 2jlm_A 118 RAVESEVHVMVGCIDATNVASIQLHQKLGFIHSGTIQ 154 (182)
T ss_dssp HHHHTTCCEEEEEEETTCHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHCCceEEEEEEeCCCHHHHHHHHHCCCcEEEEee
Confidence 346789999987 45676666667888998887665
No 34
>3i3g_A N-acetyltransferase; malaria, structural genomics, structural genomics consortium, SGC,; 1.86A {Trypanosoma brucei} PDB: 3fb3_A
Probab=26.91 E-value=41 Score=26.10 Aligned_cols=101 Identities=19% Similarity=0.203 Sum_probs=58.5
Q ss_pred hHHHHHHHHHHHHcCCEEEEEEeCCCCCCcchHHHhhhhhcccCCCCchhhhhhcCCCCCccChhHHHHHHHH-------
Q 018477 198 GNQLALAMKQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGHDTVEANEELGLPVDSREYGIGAQILRD------- 270 (355)
Q Consensus 198 g~qL~~Al~~Ia~~G~GVlvYLr~qEgrgiGl~~kl~ay~lq~~g~dt~~An~~lg~~~D~RdygigAqILrd------- 270 (355)
..++...++.+.+.+....+|+...+|+=+|...-...........++.. -..+...++.|.-|+|.++|+.
T Consensus 49 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~~~~~-i~~~~V~p~~rg~Gig~~Ll~~~~~~a~~ 127 (161)
T 3i3g_A 49 GVELANIADMRRRAGIVTKVFCHQPTGRIVGSASLMIQPKFTRGGRAVGH-IEDVVVDPSYRGAGLGKALIMDLCEISRS 127 (161)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEETTTTEEEEEEEEEEECCSSGGGCCEEE-EEEEEECGGGTTTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCceEEEEEEcCCCeEEEEEEEeccCCCCCCccEEE-EEEEEEcHHHcccCHHHHHHHHHHHHHHH
Confidence 45677777777777655555665455554553311100000000011100 0123457889999999988765
Q ss_pred cCCCeeeeccCCcccccccccCCceEEEEe
Q 018477 271 LGVRTMKLMTNNPSKYVGLKGYGLAIAGRI 300 (355)
Q Consensus 271 LGV~~irLLTNnP~K~~aL~g~GieV~erv 300 (355)
.|++.+.|-+|.. .+.-.+.+|.+.+++.
T Consensus 128 ~g~~~i~l~~~~~-n~~~y~k~GF~~~~~~ 156 (161)
T 3i3g_A 128 KGCYKVILDSSEK-SLPFYEKLGFRAHERQ 156 (161)
T ss_dssp TTCSEEEEEECTT-THHHHHHTTCEEEEEE
T ss_pred cCCcEEEEEeccc-chhHHHhcCCeecCce
Confidence 4899999887643 3566788888887753
No 35
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=26.81 E-value=70 Score=30.53 Aligned_cols=36 Identities=11% Similarity=0.087 Sum_probs=29.9
Q ss_pred CCCCcEEEEEEeC-CCCcccChhHHHHHHHhcCCeEE
Q 018477 82 GLEPVAVLCEIVD-DDGSMARLPKLRQFAQTENLKII 117 (355)
Q Consensus 82 gl~Paavi~ei~~-~dg~~a~~~~~~~fA~~h~L~iv 117 (355)
.-.+.+|++|-.+ ..|.....+++.++|++||+.+|
T Consensus 150 ~~~~~~v~~e~~~np~G~~~~l~~i~~la~~~g~~li 186 (400)
T 3nmy_A 150 RADTKMVWIETPTNPMLKLVDIAAIAVIARKHGLLTV 186 (400)
T ss_dssp CTTEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEE
T ss_pred ccCCCEEEEECCCCCCCeeecHHHHHHHHHHcCCEEE
Confidence 3356788887664 57999999999999999999887
No 36
>3ewt_E Tumor necrosis factor receptor superfamily member 6; calmodulin-peptide complex, FAS, death domain, calcium, calcium binding protein; 2.40A {Homo sapiens}
Probab=26.15 E-value=28 Score=21.33 Aligned_cols=16 Identities=13% Similarity=0.457 Sum_probs=13.3
Q ss_pred ccChhHHHHHHHhcCC.
Q 018477 99 MARLPKLRQFAQTENL. 114 (355)
Q Consensus 99 ~a~~~~~~~fA~~h~L. 114 (355)
-|...++++|+++||+
T Consensus 10 ~M~~~~Vk~fvR~~gi. 25 (25)
T 3ewt_E 10 VMTLSQVKGFVRKNGVx 26 (26)
T ss_pred HHhHHHHHHHHHHcCC.
Confidence 4567899999999986
No 37
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=26.10 E-value=70 Score=31.08 Aligned_cols=39 Identities=10% Similarity=0.191 Sum_probs=30.9
Q ss_pred HHhCCCCcEEEEEEe-CCCCcccChhHHHHHHHhcCCeEE
Q 018477 79 VLAGLEPVAVLCEIV-DDDGSMARLPKLRQFAQTENLKII 117 (355)
Q Consensus 79 rlAgl~Paavi~ei~-~~dg~~a~~~~~~~fA~~h~L~iv 117 (355)
+...-.+.+|++|-. |..|.....+++.++|++||++++
T Consensus 162 ~ai~~~t~~v~~e~p~NptG~~~dl~~i~~la~~~g~~li 201 (430)
T 3ri6_A 162 HACDETTKLLFLETISNPQLQVADLEALSKVVHAKGIPLV 201 (430)
T ss_dssp HHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEE
T ss_pred HhhCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEE
Confidence 333335677887755 567999999999999999999987
No 38
>1u6m_A Acetyltransferase, GNAT family; structural genomics, PSI, protein structure initiative; 2.40A {Enterococcus faecalis} SCOP: d.108.1.1
Probab=26.08 E-value=59 Score=26.78 Aligned_cols=58 Identities=19% Similarity=0.306 Sum_probs=39.5
Q ss_pred EEEeCCCCCCcchHHHhhhhhcccCCCCchhhhhhcCCCCCccChhHHHHHHHHcCCCeeeecc--CCcccccccccCCc
Q 018477 217 VYLRGHEGRGIGLGHKLRAYNLQDDGHDTVEANEELGLPVDSREYGIGAQILRDLGVRTMKLMT--NNPSKYVGLKGYGL 294 (355)
Q Consensus 217 vYLr~qEgrgiGl~~kl~ay~lq~~g~dt~~An~~lg~~~D~RdygigAqILrdLGV~~irLLT--NnP~K~~aL~g~Gi 294 (355)
||+. .+-||.|+..+|-.+ +.+..+..|+++|+|-+ .|+.-+.--+.+|.
T Consensus 118 l~V~-p~~rg~GiG~~Ll~~---------------------------~~~~a~~~g~~~i~L~v~~~N~~A~~fY~k~GF 169 (199)
T 1u6m_A 118 ISVD-ERFRGMGIGSKLLDA---------------------------LPEVAKASGKQALGLNVDFDNPGARKLYASKGF 169 (199)
T ss_dssp EEEC-GGGTTSSHHHHHHHT---------------------------HHHHHHTTTCSEEEEEEETTCHHHHHHHHTTTC
T ss_pred EEEC-HHHcCCCHHHHHHHH---------------------------HHHHHHHcCCCEEEEEEecCCHHHHHHHHHCCC
Confidence 5665 666777777666432 13446678999998764 56655556688999
Q ss_pred eEEEEeec
Q 018477 295 AIAGRIPL 302 (355)
Q Consensus 295 eV~ervpl 302 (355)
++++.++.
T Consensus 170 ~~~~~~~~ 177 (199)
T 1u6m_A 170 KDVTTMTI 177 (199)
T ss_dssp EEEEEEEE
T ss_pred EEccEEEe
Confidence 99888764
No 39
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=25.72 E-value=91 Score=28.43 Aligned_cols=34 Identities=21% Similarity=0.218 Sum_probs=28.4
Q ss_pred CCcEEEEEEe-CCCCcccChhHHHHHHHhcCCeEE
Q 018477 84 EPVAVLCEIV-DDDGSMARLPKLRQFAQTENLKII 117 (355)
Q Consensus 84 ~Paavi~ei~-~~dg~~a~~~~~~~fA~~h~L~iv 117 (355)
.+.+++.+-. |..|..+..+++.++|++||+.++
T Consensus 175 ~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li 209 (399)
T 3tqx_A 175 RFKLIATDGVFSMDGIIADLKSICDLADKYNALVM 209 (399)
T ss_dssp SSEEEEEESEETTTTEECCHHHHHHHHHHTTCEEE
T ss_pred CceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEE
Confidence 6777776654 567999999999999999999887
No 40
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=25.37 E-value=71 Score=30.08 Aligned_cols=39 Identities=13% Similarity=0.116 Sum_probs=30.5
Q ss_pred HHhCCCCcEEEEEEe-CCCCcccChhHHHHHHHhcCCeEE
Q 018477 79 VLAGLEPVAVLCEIV-DDDGSMARLPKLRQFAQTENLKII 117 (355)
Q Consensus 79 rlAgl~Paavi~ei~-~~dg~~a~~~~~~~fA~~h~L~iv 117 (355)
++..-.+.+|++|-. |+.|.....+++.++|++||+.++
T Consensus 146 ~~i~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~g~~li 185 (392)
T 3qhx_A 146 AAIRPTTRLIWVETPTNPLLSIADIAGIAQLGADSSAKVL 185 (392)
T ss_dssp HHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEE
T ss_pred HhhCCCCeEEEEECCCCCCcEEecHHHHHHHHHHcCCEEE
Confidence 333335677777755 457999999999999999999887
No 41
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=25.33 E-value=74 Score=28.85 Aligned_cols=34 Identities=9% Similarity=0.146 Sum_probs=27.6
Q ss_pred CCcEEEEE-EeCCCCcccChhHHHHHHHhcCCeEE
Q 018477 84 EPVAVLCE-IVDDDGSMARLPKLRQFAQTENLKII 117 (355)
Q Consensus 84 ~Paavi~e-i~~~dg~~a~~~~~~~fA~~h~L~iv 117 (355)
.+.++++. .-+..|.....+++.++|++||+.++
T Consensus 144 ~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li 178 (376)
T 3f0h_A 144 NFTGLLVNVDETSTAVLYDTMMIGEFCKKNNMFFV 178 (376)
T ss_dssp CCCEEEEESEETTTTEECCHHHHHHHHHHTTCEEE
T ss_pred CceEEEEecccCCcceecCHHHHHHHHHHcCCEEE
Confidence 45666665 34678999999999999999999887
No 42
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=25.24 E-value=1e+02 Score=30.07 Aligned_cols=52 Identities=19% Similarity=0.247 Sum_probs=40.3
Q ss_pred cccchhHHHHHHHHHhCCCCcEEEEEEeC-CCCcccChhHHHHHHHhcCCeEE
Q 018477 66 KRAGHTEASVDLAVLAGLEPVAVLCEIVD-DDGSMARLPKLRQFAQTENLKII 117 (355)
Q Consensus 66 ~R~GhtEaavdL~rlAgl~Paavi~ei~~-~dg~~a~~~~~~~fA~~h~L~iv 117 (355)
-..-+-|.+++=.+..|..|..|++..-+ ..|.....+++.++|++||+.+.
T Consensus 216 ~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~~l~~I~~la~~~~~~lh 268 (475)
T 3k40_A 216 MRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDYLDECGPVGNKHNLWIH 268 (475)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEE
T ss_pred cCHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCcCCHHHHHHHHHHhCCeEE
Confidence 44556677777666778888877775543 46999999999999999999875
No 43
>4fd5_A Arylalkylamine N-acetyltransferase 2; GNAT; 1.64A {Aedes aegypti} PDB: 4fd6_A
Probab=24.65 E-value=35 Score=28.84 Aligned_cols=37 Identities=16% Similarity=0.161 Sum_probs=29.5
Q ss_pred HHHHHcCCCeeeeccCCcccccccccCCceEEEEeec
Q 018477 266 QILRDLGVRTMKLMTNNPSKYVGLKGYGLAIAGRIPL 302 (355)
Q Consensus 266 qILrdLGV~~irLLTNnP~K~~aL~g~GieV~ervpl 302 (355)
+.++..|++.+.+.+.|+.-..-.+.+|.+.++.++.
T Consensus 157 ~~~~~~g~~~~~~~~~~~~~~~~y~~~Gf~~~~~~~~ 193 (222)
T 4fd5_A 157 ELALDRGFQVMKTDATGAFSQRVVSSLGFITKCEINY 193 (222)
T ss_dssp HHHHHTTCCEEEEEECSHHHHHHHHHTTCEEEEEEEG
T ss_pred HHHHHCCCCEEEEEeCCHHHHHHHHHCCCEEEEEEch
Confidence 3456779999988888876666678999999998875
No 44
>1cjw_A Protein (serotonin N-acetyltransferase); HET: COT; 1.80A {Ovis aries} SCOP: d.108.1.1 PDB: 1b6b_A
Probab=24.61 E-value=56 Score=24.98 Aligned_cols=34 Identities=21% Similarity=0.188 Sum_probs=25.1
Q ss_pred HHHH-cCCCeeeeccCCcccccccccCCceEEEEee
Q 018477 267 ILRD-LGVRTMKLMTNNPSKYVGLKGYGLAIAGRIP 301 (355)
Q Consensus 267 ILrd-LGV~~irLLTNnP~K~~aL~g~GieV~ervp 301 (355)
.++. .|++.+.|-+ |+.-....+.+|.+.++...
T Consensus 117 ~~~~~~g~~~i~l~~-n~~a~~~y~k~GF~~~~~~~ 151 (166)
T 1cjw_A 117 HVGAQPAVRRAVLMC-EDALVPFYQRFGFHPAGPCA 151 (166)
T ss_dssp HHHTSTTCCEEEEEE-CGGGHHHHHTTTEEEEEECS
T ss_pred HHHHhcCcceEEEec-CchHHHHHHHcCCeECCccc
Confidence 3556 5999998855 56666678899999888644
No 45
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=24.30 E-value=93 Score=29.83 Aligned_cols=36 Identities=17% Similarity=0.294 Sum_probs=29.7
Q ss_pred CCCCcEEEEEEe-CCCCcccChhHHHHHHHhcCCeEE
Q 018477 82 GLEPVAVLCEIV-DDDGSMARLPKLRQFAQTENLKII 117 (355)
Q Consensus 82 gl~Paavi~ei~-~~dg~~a~~~~~~~fA~~h~L~iv 117 (355)
.-.+.+|++|-. |..|.....+++.++|++||+++|
T Consensus 164 ~~~t~~v~le~p~NptG~~~~l~~i~~la~~~g~~li 200 (414)
T 3ndn_A 164 SVPTQAVFFETPSNPMQSLVDIAAVTELAHAAGAKVV 200 (414)
T ss_dssp SSCCSEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEE
T ss_pred CCCCeEEEEECCCCCCCccccHHHHHHHHHHcCCEEE
Confidence 335678887766 557999999999999999999887
No 46
>3jvn_A Acetyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.61A {Vibrio fischeri}
Probab=24.09 E-value=1.1e+02 Score=23.49 Aligned_cols=36 Identities=22% Similarity=0.131 Sum_probs=13.8
Q ss_pred HHHHHcCCCeeeecc--CCcccccccccCCceEEEEee
Q 018477 266 QILRDLGVRTMKLMT--NNPSKYVGLKGYGLAIAGRIP 301 (355)
Q Consensus 266 qILrdLGV~~irLLT--NnP~K~~aL~g~GieV~ervp 301 (355)
+.++..|+++|.|.+ .|+.-....+.+|.+.++..-
T Consensus 115 ~~a~~~g~~~i~l~v~~~n~~a~~~y~k~GF~~~~~~~ 152 (166)
T 3jvn_A 115 QELKDYGVKEIFVEVWDFNKGALEFYNKQGLNEHIHYL 152 (166)
T ss_dssp HHHHTTTCSEEEECCC--CCBC----------------
T ss_pred HHHHHcCCCEEEEEEecCCHHHHHHHHHcCCeEHHHHH
Confidence 346678999998876 455666678888988776433
No 47
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=24.08 E-value=64 Score=30.79 Aligned_cols=40 Identities=13% Similarity=0.260 Sum_probs=29.4
Q ss_pred CCCCcEEEEEEeC-CCCccc----ChhHHHHHHHhcCCeEEehhhH
Q 018477 82 GLEPVAVLCEIVD-DDGSMA----RLPKLRQFAQTENLKIISIADL 122 (355)
Q Consensus 82 gl~Paavi~ei~~-~dg~~a----~~~~~~~fA~~h~L~ivti~dl 122 (355)
.-.+++++||=+. ..|... ..+++.++|++||+.+| ++|+
T Consensus 210 ~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI-~DEv 254 (433)
T 1z7d_A 210 DPNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFV-ADEV 254 (433)
T ss_dssp STTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEE-EECT
T ss_pred CCCEEEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEE-EecC
Confidence 4467899998654 457544 67889999999999887 3444
No 48
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=23.59 E-value=53 Score=32.01 Aligned_cols=40 Identities=13% Similarity=0.343 Sum_probs=30.7
Q ss_pred CCcEEEEEEe-CCCCcccC----hhHHHHHHHhcCCeEEehhhHHH
Q 018477 84 EPVAVLCEIV-DDDGSMAR----LPKLRQFAQTENLKIISIADLIR 124 (355)
Q Consensus 84 ~Paavi~ei~-~~dg~~a~----~~~~~~fA~~h~L~ivti~dli~ 124 (355)
.+++|++|-+ ++.|.... .+++.++|++||+.++ ++|+..
T Consensus 258 ~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli-~DEv~~ 302 (472)
T 1ohv_A 258 TVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFL-VDEVQT 302 (472)
T ss_dssp CEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEE-EECTTT
T ss_pred CEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEE-EeCccc
Confidence 6789999854 56786665 7899999999999988 555543
No 49
>1ghe_A Acetyltransferase; acyl coenzyme A complex; HET: ACO; 1.55A {Pseudomonas syringae PV} SCOP: d.108.1.1 PDB: 1j4j_A*
Probab=23.16 E-value=45 Score=25.95 Aligned_cols=35 Identities=11% Similarity=0.038 Sum_probs=24.3
Q ss_pred HHHHcCCCeeeecc--CCcccccccccCCceEEEEeec
Q 018477 267 ILRDLGVRTMKLMT--NNPSKYVGLKGYGLAIAGRIPL 302 (355)
Q Consensus 267 ILrdLGV~~irLLT--NnP~K~~aL~g~GieV~ervpl 302 (355)
.++..|++.+.|-+ +|+ -....+.+|.+.++..+.
T Consensus 118 ~~~~~g~~~i~l~~~~~n~-a~~~y~k~Gf~~~~~~~~ 154 (177)
T 1ghe_A 118 VAVKHKRGLLHLDTEAGSV-AEAFYSALAYTRVGELPG 154 (177)
T ss_dssp HHHHTTCCEEEEEEETTSH-HHHHHHHTTCEEEEEEEE
T ss_pred HHHHcCCCEEEEEeccCCH-HHHHHHHcCCEEcccccc
Confidence 35567888887754 555 556678888888877653
No 50
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=23.11 E-value=63 Score=29.97 Aligned_cols=36 Identities=8% Similarity=0.149 Sum_probs=28.3
Q ss_pred CCCCcEEEEEEe-CCCCcccChhHHHHHHHhcCCeEE
Q 018477 82 GLEPVAVLCEIV-DDDGSMARLPKLRQFAQTENLKII 117 (355)
Q Consensus 82 gl~Paavi~ei~-~~dg~~a~~~~~~~fA~~h~L~iv 117 (355)
.-.+.+++++-. +..|.....+++.++|++||+.++
T Consensus 161 ~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li 197 (423)
T 3lvm_A 161 RDDTILVSIMHVNNEIGVVQDIAAIGEMCRARGIIYH 197 (423)
T ss_dssp CTTEEEEECCSBCTTTCBBCCHHHHHHHHHHHTCEEE
T ss_pred CCCcEEEEEeCCCCCCccccCHHHHHHHHHHcCCEEE
Confidence 335666666544 467999999999999999999887
No 51
>2fiw_A GCN5-related N-acetyltransferase:aminotransferase II; alpha-beta-alpha sandwich, GCN4-related acetyltransferase, S genomics, PSI; HET: ACO; 2.35A {Rhodopseudomonas palustris} SCOP: d.108.1.1
Probab=22.63 E-value=64 Score=25.10 Aligned_cols=36 Identities=8% Similarity=0.041 Sum_probs=26.3
Q ss_pred HHHHHcCCCeeeeccCCcccccccccCCceEEEEeec
Q 018477 266 QILRDLGVRTMKLMTNNPSKYVGLKGYGLAIAGRIPL 302 (355)
Q Consensus 266 qILrdLGV~~irLLTNnP~K~~aL~g~GieV~ervpl 302 (355)
+.++..|++.+.|-+ |+.-+...+.+|.+.+++...
T Consensus 109 ~~~~~~g~~~i~~~~-n~~a~~~y~k~GF~~~~~~~~ 144 (172)
T 2fiw_A 109 KLAGARGALILTVDA-SDNAAEFFAKRGYVAKQRNTV 144 (172)
T ss_dssp HHHHTTTCSEEEEEE-CTTTHHHHHTTTCEEEEEEEE
T ss_pred HHHHhcCCcEEEEEe-CHHHHHHHHHcCCEEecceeE
Confidence 345667999999888 455566678899988876543
No 52
>2i6c_A Putative acetyltransferase; GNAT family, structural genomic, structur genomics, PSI-2, protein structure initiative; HET: MSE EPE; 1.30A {Pseudomonas aeruginosa} SCOP: d.108.1.1 PDB: 3pgp_A*
Probab=22.57 E-value=52 Score=25.16 Aligned_cols=34 Identities=18% Similarity=0.181 Sum_probs=24.8
Q ss_pred HHH-cCCCeeeec--cCCcccccccccCCceEEEEee
Q 018477 268 LRD-LGVRTMKLM--TNNPSKYVGLKGYGLAIAGRIP 301 (355)
Q Consensus 268 Lrd-LGV~~irLL--TNnP~K~~aL~g~GieV~ervp 301 (355)
++. +|++++.|- .+|+.-....+.+|.+.++..+
T Consensus 104 ~~~~~g~~~i~l~~~~~n~~a~~~y~k~Gf~~~~~~~ 140 (160)
T 2i6c_A 104 AREQYKARLMKISCFNANAAGLLLYTQLGYQPRAIAE 140 (160)
T ss_dssp HHHHHCCSEEEEEEETTCHHHHHHHHHTTCEEEEEEE
T ss_pred HHhhCCccEEEEEEecCCHHHHHHHHHcCCEEccccc
Confidence 445 799998875 4566666667889998887655
No 53
>2pc1_A Acetyltransferase, GNAT family; NP_688560.1, structural genom joint center for structural genomics, JCSG; HET: MSE; 1.28A {Streptococcus agalactiae 2603V}
Probab=22.48 E-value=64 Score=26.34 Aligned_cols=47 Identities=19% Similarity=0.240 Sum_probs=28.7
Q ss_pred CccChhHHHHHHH----HcCCCeeeec--cCCcccccccccCCceEEEEeecC
Q 018477 257 DSREYGIGAQILR----DLGVRTMKLM--TNNPSKYVGLKGYGLAIAGRIPLL 303 (355)
Q Consensus 257 D~RdygigAqILr----dLGV~~irLL--TNnP~K~~aL~g~GieV~ervpl~ 303 (355)
+.|.-|+|.++|+ ..|++.|.|- .+|+.-+...+..|.+.++.++..
T Consensus 122 ~~rg~Gig~~Ll~~~~~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~~~~ 174 (201)
T 2pc1_A 122 QFRGRGLAQTFLQGLIEGHKGPDFRCDTHEKNVTMQHILNKLGYQYCGKVPLD 174 (201)
T ss_dssp TTCSSHHHHHHHHHHHHHSCCSEEEEEECTTCHHHHHHHHHTTCEEEEEECSS
T ss_pred HHhCCCHHHHHHHHHHHhCCCceEEEEEecCCHHHHHHHHHCCCEEEEEEEec
Confidence 3344444444444 4578877764 345555666788888888876654
No 54
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=22.36 E-value=85 Score=28.69 Aligned_cols=33 Identities=27% Similarity=0.365 Sum_probs=27.4
Q ss_pred CcEEEEE-EeCCCCcccChhHHHHHHHhcCCeEE
Q 018477 85 PVAVLCE-IVDDDGSMARLPKLRQFAQTENLKII 117 (355)
Q Consensus 85 Paavi~e-i~~~dg~~a~~~~~~~fA~~h~L~iv 117 (355)
+++++++ .-|..|.....+++.++|++||+.++
T Consensus 169 ~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li 202 (384)
T 1bs0_A 169 QQMVVTEGVFSMDGDSAPLAEIQQVTQQHNGWLM 202 (384)
T ss_dssp CEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEE
T ss_pred CeEEEEeCCCCCCCCccCHHHHHHHHHHcCcEEE
Confidence 5666666 44668999999999999999999887
No 55
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=22.06 E-value=84 Score=30.59 Aligned_cols=47 Identities=19% Similarity=0.148 Sum_probs=35.5
Q ss_pred hHHHHHHHHHhCCCCcEEEEEEe-CCCCcccChhHHHHHHHhcCCeEE
Q 018477 71 TEASVDLAVLAGLEPVAVLCEIV-DDDGSMARLPKLRQFAQTENLKII 117 (355)
Q Consensus 71 tEaavdL~rlAgl~Paavi~ei~-~~dg~~a~~~~~~~fA~~h~L~iv 117 (355)
-|.+++=.+..|..|.+|++... +..|.....+++.++|++||+.++
T Consensus 232 L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~l~~I~~la~~~g~~lh 279 (504)
T 2okj_A 232 FEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLH 279 (504)
T ss_dssp HHHHHHHHHHTTCEEEEEEECBSCSSSCCBCCHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEE
Confidence 34455544455778888887655 456889999999999999998875
No 56
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=21.88 E-value=86 Score=28.83 Aligned_cols=36 Identities=28% Similarity=0.338 Sum_probs=28.2
Q ss_pred CCCCcEEEEEEe-CCCCcccC----hhHHHHHHHhcCCeEE
Q 018477 82 GLEPVAVLCEIV-DDDGSMAR----LPKLRQFAQTENLKII 117 (355)
Q Consensus 82 gl~Paavi~ei~-~~dg~~a~----~~~~~~fA~~h~L~iv 117 (355)
.-.+.+|+|+=. +..|.... .+++.++|++||+.++
T Consensus 183 ~~~~~~v~~~~~~~~tG~~~~~~~~l~~i~~l~~~~~~~li 223 (395)
T 1vef_A 183 DEETAAVILEPVQGEGGVRPATPEFLRAAREITQEKGALLI 223 (395)
T ss_dssp CTTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEE
T ss_pred ccCEEEEEEeCccCCCCccCCCHHHHHHHHHHHHHcCCEEE
Confidence 335778888655 45687776 8899999999999887
No 57
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=21.82 E-value=97 Score=28.19 Aligned_cols=34 Identities=15% Similarity=0.189 Sum_probs=27.4
Q ss_pred CCcEEEEEEe-CCCCcccChhHHHHHHHhcCCeEE
Q 018477 84 EPVAVLCEIV-DDDGSMARLPKLRQFAQTENLKII 117 (355)
Q Consensus 84 ~Paavi~ei~-~~dg~~a~~~~~~~fA~~h~L~iv 117 (355)
.+.+|+++-. +..|.....+++.++|++||+.++
T Consensus 164 ~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li 198 (406)
T 1kmj_A 164 KTRLLAITHVSNVLGTENPLAEMITLAHQHGAKVL 198 (406)
T ss_dssp TEEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEE
T ss_pred CCeEEEEeCCCccccCcCCHHHHHHHHHHcCCEEE
Confidence 5666666554 456999999999999999999877
No 58
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=21.79 E-value=62 Score=28.96 Aligned_cols=34 Identities=15% Similarity=0.180 Sum_probs=26.7
Q ss_pred CCcEEEEEEeCCCCcccC---hhHHHHHHHhcCCeEE
Q 018477 84 EPVAVLCEIVDDDGSMAR---LPKLRQFAQTENLKII 117 (355)
Q Consensus 84 ~Paavi~ei~~~dg~~a~---~~~~~~fA~~h~L~iv 117 (355)
.+.+|+++-.++.|.... ..++.++|++||+.++
T Consensus 145 ~~~~v~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li 181 (359)
T 1svv_A 145 IPKLVYISNTTEVGTQYTKQELEDISASCKEHGLYLF 181 (359)
T ss_dssp EEEEEEEESSCTTSCCCCHHHHHHHHHHHHHHTCEEE
T ss_pred CceEEEEEcCCCCceecCHHHHHHHHHHHHHhCCEEE
Confidence 367777766666788877 7778999999999877
No 59
>3u02_A Putative transcription-associated protein TFIIS; structural genomics, PSI-biology; HET: TPO MSE CIT MES; 2.40A {Pyrococcus furiosus dsm 3638}
Probab=21.76 E-value=1.1e+02 Score=28.50 Aligned_cols=129 Identities=14% Similarity=0.100 Sum_probs=76.4
Q ss_pred CCCCcEEEEEEeCCC----------CcccChhHHHHHHHhcCCeEE---ehhhHHHHHhhhhhhhhhcccccccCCcccE
Q 018477 82 GLEPVAVLCEIVDDD----------GSMARLPKLRQFAQTENLKII---SIADLIRYRRKRDRLVELAAAAPIPTMWGPF 148 (355)
Q Consensus 82 gl~Paavi~ei~~~d----------g~~a~~~~~~~fA~~h~L~iv---ti~dli~yr~~~E~lV~r~~~~~lpT~~G~F 148 (355)
+-.|..|+++--..+ -++...++++++|+++|+.+. +..- +|=-++..-++...-+|
T Consensus 90 ~t~PGi~v~~~~~~~~L~~f~~~A~~~vvt~~~A~~~a~~~gi~~~~~~~grG----------iIGALAAiG~~l~d~Ty 159 (252)
T 3u02_A 90 NTNPGIVFLIGEVPKELEEFSLRALREHVTIEEAEHVARKVNAEVYKFKLGRG----------IIGGLAAIGYPLEKFTY 159 (252)
T ss_dssp ---CCEEEEESSBCHHHHHHHHHHHHSCCCHHHHHHHHHHTTCEEETCCSSTH----------HHHHHHHHHCCTTSCEE
T ss_pred CCCCEEEEEeCCCCHHHHHHHHHHHHcccCHHHHHHHHHHCCcEEEecCCCCe----------eeehhhhccCCCCCCcc
Confidence 357988877532111 156667788888888888655 2333 33334444444344489
Q ss_pred EEEEEEeCCC-Cc------e--------EEEEEECcCC-CCCcceEEeccCCccccccCCCCCCChHHHHHHHHHHH-Hc
Q 018477 149 KAHCYRSLLD-GI------E--------HIAMVKGEIG-DGQDILVRVHSECLTGDIFGSARCDCGNQLALAMKQIE-AA 211 (355)
Q Consensus 149 ~~~~y~~~~~-g~------e--------H~ALv~Gdi~-~~~~vlVRVHS~cltgDvfgs~~CdCg~qL~~Al~~Ia-~~ 211 (355)
++.+||.... |. + .+-.++-+++ ....|++=-|..|.. +|| .|-+..+-|.+|+++|. .|
T Consensus 160 EllaYR~~~~~g~~R~vd~~sv~~~~~~t~p~t~~nvD~~~~~~~i~Ph~pdPV--L~G-IRG~~p~~l~~a~~~i~~~e 236 (252)
T 3u02_A 160 ELLAYRKREYWGTPRRVIKESVFYADKWSYPFTYDNVDPYKRTVLITPHGKDPV--LVG-IRGIDVGKILQVFEMIKIEE 236 (252)
T ss_dssp EEEEEECGGGTTSCCCEECCCCCCCCGGGTTBCSSCCCCCCCCEEECCCTTCSE--EEE-EEESCHHHHHHHHHHSEECS
T ss_pred eeeEeeccccCCCCCcCCHHHHHHHHHhcCCCeEeeeeCCCCEEEEecCCCCCE--EEE-ecCCCHHHHHHHHHHhhccC
Confidence 9999995432 11 1 0111222222 134567788999985 554 45677889999999997 33
Q ss_pred C-CEEEEEEeCCC
Q 018477 212 G-RGVLVYLRGHE 223 (355)
Q Consensus 212 G-~GVlvYLr~qE 223 (355)
. .+..||.-||-
T Consensus 237 ~~~~~~if~TNQg 249 (252)
T 3u02_A 237 PIEFFQVYKTNQN 249 (252)
T ss_dssp CEEEEEEEEESCC
T ss_pred CcceEEEEeccCC
Confidence 3 78888987663
No 60
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=21.65 E-value=85 Score=29.61 Aligned_cols=38 Identities=18% Similarity=0.225 Sum_probs=30.0
Q ss_pred CCcEEEEEEe-CCCCcccChhHHHHHHHhcCCeEEehhhH
Q 018477 84 EPVAVLCEIV-DDDGSMARLPKLRQFAQTENLKIISIADL 122 (355)
Q Consensus 84 ~Paavi~ei~-~~dg~~a~~~~~~~fA~~h~L~ivti~dl 122 (355)
.+.+|+++=+ +.+|..+..+++.++|++||+.++ ++|.
T Consensus 194 ~~~~v~~~~~~n~tG~~~~l~~l~~l~~~~g~~li-~Dea 232 (427)
T 2w8t_A 194 PAKLVVLEGVYSMLGDIAPLKEMVAVAKKHGAMVL-VDEA 232 (427)
T ss_dssp SCEEEEEESEETTTTEECCHHHHHHHHHHTTCEEE-EECT
T ss_pred CCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEE-EECC
Confidence 5677777655 567999999999999999999877 3443
No 61
>3mgd_A Predicted acetyltransferase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; HET: ACO; 1.90A {Clostridium acetobutylicum}
Probab=21.64 E-value=38 Score=25.95 Aligned_cols=36 Identities=14% Similarity=0.116 Sum_probs=24.3
Q ss_pred HHHHcCCCeeeeccCCcccccccccCCceEEEEeecC
Q 018477 267 ILRDLGVRTMKLMTNNPSKYVGLKGYGLAIAGRIPLL 303 (355)
Q Consensus 267 ILrdLGV~~irLLTNnP~K~~aL~g~GieV~ervpl~ 303 (355)
.++..|++.+.|.+| +.-..-.+.+|.+.++.....
T Consensus 112 ~~~~~g~~~i~l~~n-~~a~~~y~k~GF~~~~~~~~~ 147 (157)
T 3mgd_A 112 EAKERNIHKICLVAS-KLGRPVYKKYGFQDTDEWLEL 147 (157)
T ss_dssp HHHHTTCCCEEECCC-TTHHHHHHHHTCCCCTTCCCC
T ss_pred HHHHCCCCEEEEEeC-cccHHHHHHcCCeecceEEEE
Confidence 356779999999885 444555677787776655443
No 62
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=21.58 E-value=1.1e+02 Score=27.99 Aligned_cols=34 Identities=15% Similarity=0.228 Sum_probs=27.3
Q ss_pred CCcEEEEEEe-CCCCcccChhHHHHHHHhcCCeEE
Q 018477 84 EPVAVLCEIV-DDDGSMARLPKLRQFAQTENLKII 117 (355)
Q Consensus 84 ~Paavi~ei~-~~dg~~a~~~~~~~fA~~h~L~iv 117 (355)
.+.+|+++-. +..|.....+++.++|++||+.+|
T Consensus 169 ~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li 203 (420)
T 1t3i_A 169 KTKLVTVVHISNTLGCVNPAEEIAQLAHQAGAKVL 203 (420)
T ss_dssp TEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEE
T ss_pred CceEEEEeCCcccccCcCCHHHHHHHHHHcCCEEE
Confidence 5666666554 447999999999999999999876
No 63
>1vkm_A Conserved hypothetical protein TM1464; indigoidine synthase A-like fold, structural genomics, joint for structural genomics, JCSG; HET: MSE UNL; 1.90A {Thermotoga maritima} SCOP: c.138.1.1
Probab=21.56 E-value=64 Score=30.78 Aligned_cols=52 Identities=17% Similarity=0.333 Sum_probs=38.8
Q ss_pred CCcccccchhHHHHHHHHHhCCCCcEEEEEEeCCCCcccChhHHHHHHHhcCCeEEeh
Q 018477 62 GGVLKRAGHTEASVDLAVLAGLEPVAVLCEIVDDDGSMARLPKLRQFAQTENLKIISI 119 (355)
Q Consensus 62 ggvl~R~GhtEaavdL~rlAgl~Paavi~ei~~~dg~~a~~~~~~~fA~~h~L~ivti 119 (355)
||| .+|-.+-|-||..|+ -.|++|+|-=. -.+++.+.-.+|-+.+|.|+++-
T Consensus 130 GGV--HRgt~DISaDL~eL~-rTpV~VVcaG~---KsILDi~~TLE~LET~GV~Vvgy 181 (297)
T 1vkm_A 130 GGV--HPGRVDVSQDLTEMS-SSRAVLVSSGI---KSILDVEATFEMLETLEIPLVGF 181 (297)
T ss_dssp CCB--CTTSSCBCHHHHHHT-TCCEEEEESBB---CTTSCHHHHHHHHHHTTCCEEEE
T ss_pred ccc--cCCCcccchhHHHhc-CCCeEEEeccc---chhhcchhHHHHHHhCCceEEEe
Confidence 455 335556788888885 56899999433 35888999999999999998854
No 64
>1tiq_A Protease synthase and sporulation negative regulatory protein PAI 1; alpha-beta protein, structural genomics, PSI; HET: COA; 1.90A {Bacillus subtilis} SCOP: d.108.1.1
Probab=21.47 E-value=46 Score=27.08 Aligned_cols=58 Identities=19% Similarity=0.271 Sum_probs=39.3
Q ss_pred EEEeCCCCCCcchHHHhhhhhcccCCCCchhhhhhcCCCCCccChhHHHHHHHHcCCCeeeecc--CCcccccccccCCc
Q 018477 217 VYLRGHEGRGIGLGHKLRAYNLQDDGHDTVEANEELGLPVDSREYGIGAQILRDLGVRTMKLMT--NNPSKYVGLKGYGL 294 (355)
Q Consensus 217 vYLr~qEgrgiGl~~kl~ay~lq~~g~dt~~An~~lg~~~D~RdygigAqILrdLGV~~irLLT--NnP~K~~aL~g~Gi 294 (355)
+|+. ++-||-|+..+|-.+ ..+..+..|+++|.|-+ .|+.-+.--+.+|.
T Consensus 96 l~V~-p~~rg~GiG~~Ll~~---------------------------~~~~a~~~g~~~i~L~v~~~N~~A~~fY~k~GF 147 (180)
T 1tiq_A 96 IYIK-NSFQKHGLGKHLLNK---------------------------AIEIALERNKKNIWLGVWEKNENAIAFYKKMGF 147 (180)
T ss_dssp EEEC-GGGCSSSHHHHHHHH---------------------------HHHHHHHTTCSEEEEEEETTCHHHHHHHHHTTC
T ss_pred EEEC-HHHhCCCHHHHHHHH---------------------------HHHHHHHCCCCEEEEEehhcCHHHHHHHHHcCC
Confidence 6775 676777777665332 13345778999998854 56655666788999
Q ss_pred eEEEEeec
Q 018477 295 AIAGRIPL 302 (355)
Q Consensus 295 eV~ervpl 302 (355)
++++..+.
T Consensus 148 ~~~g~~~~ 155 (180)
T 1tiq_A 148 VQTGAHSF 155 (180)
T ss_dssp EEEEEEEE
T ss_pred EEcCcEEE
Confidence 98887663
No 65
>1vk9_A Conserved hypothetical protein TM1506; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: UNL; 2.70A {Thermotoga maritima} SCOP: c.97.1.3
Probab=21.37 E-value=1.3e+02 Score=25.84 Aligned_cols=94 Identities=20% Similarity=0.346 Sum_probs=57.3
Q ss_pred hHHHHHHHHHHHHcCCEEEEEEeC-----CCCCCc-chHHHhhhhhcccCCCCchhhhhhcCCCCCccChhHHHHHH-HH
Q 018477 198 GNQLALAMKQIEAAGRGVLVYLRG-----HEGRGI-GLGHKLRAYNLQDDGHDTVEANEELGLPVDSREYGIGAQIL-RD 270 (355)
Q Consensus 198 g~qL~~Al~~Ia~~G~GVlvYLr~-----qEgrgi-Gl~~kl~ay~lq~~g~dt~~An~~lg~~~D~RdygigAqIL-rd 270 (355)
..-|+++++.+.++|.-.|+ ..+ ..+||+ .|.+.++.. .. +. |...--+-.|-||..| -.
T Consensus 15 ~~~~~~~i~lL~e~~~ScVv-~~~~~i~ts~~rGv~pL~~ll~~~---~~-L~--------ga~vADKVVGKAAA~Lmv~ 81 (151)
T 1vk9_A 15 KNLLRSALKIFEKKDLSLLA-YSGRSIFESKDSGLKPVVELFKRF---DN-LE--------GSLVIDKMVGKAAASFLLK 81 (151)
T ss_dssp HHHHHHHHHHHHHTTCSEEE-ESSSEEEEECCSTTHHHHHHHHHC---SC-CT--------TCEEEEEEECHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCeeEEE-ecCCEEEEeCCcChHHHHHHHHhC---cC-cc--------CCEehHHHHhHHHHHHHHh
Confidence 46789999999999977766 332 246665 333333322 11 11 1112234456666655 45
Q ss_pred cCCCee--eeccCCcccccccccCCceEE--EEeecCCCC
Q 018477 271 LGVRTM--KLMTNNPSKYVGLKGYGLAIA--GRIPLLTPI 306 (355)
Q Consensus 271 LGV~~i--rLLTNnP~K~~aL~g~GieV~--ervpl~~~~ 306 (355)
.||+.| .++|- | -+.-|+.+||+|. +.||.+...
T Consensus 82 ggV~~VyA~VISe-~-Al~lL~~~GI~v~Y~~~Vp~I~NR 119 (151)
T 1vk9_A 82 MKPDHIHAKVISK-P-ALKLMNEYGQSFSYDEKIPFVLGK 119 (151)
T ss_dssp HCCSEEEEEEEEH-H-HHHHHHHTTCCEEEEEEESSCBCS
T ss_pred cChheehhHHhhH-H-HHHHHHHcCCceeeeeecceeEcc
Confidence 699987 68883 3 3445999999987 677766443
No 66
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=21.00 E-value=1.1e+02 Score=29.73 Aligned_cols=50 Identities=18% Similarity=0.189 Sum_probs=38.9
Q ss_pred cchhHHHHHHHHHhCCCCcEEEEEEeC-CCCcccChhHHHHHHHhcCCeEE
Q 018477 68 AGHTEASVDLAVLAGLEPVAVLCEIVD-DDGSMARLPKLRQFAQTENLKII 117 (355)
Q Consensus 68 ~GhtEaavdL~rlAgl~Paavi~ei~~-~dg~~a~~~~~~~fA~~h~L~iv 117 (355)
.-+-|.+++=.+-.|..|..|++..-+ ..|.....+++.++|++||+.+.
T Consensus 225 ~~~Le~~i~~~~~~g~~~~~vv~~~~~t~~G~id~l~~I~~la~~~~~~lh 275 (481)
T 4e1o_A 225 GEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDCLSELGPICAREGLWLH 275 (481)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHHHhCCCCcEEEEEecCCCCCcCcCCHHHHHHHHHHcCCeEE
Confidence 445666676666778888888776654 46899999999999999999864
No 67
>2l09_A ASR4154 protein; proto-chlorophyllide reductase 57 KD subunit superfamily, ST genomics, PSI-2, protein structure initiative; NMR {Nostoc SP}
Probab=20.82 E-value=89 Score=23.05 Aligned_cols=26 Identities=15% Similarity=0.199 Sum_probs=21.5
Q ss_pred hhHHHHHHHhcCCeEEehhhHHHHHh
Q 018477 102 LPKLRQFAQTENLKIISIADLIRYRR 127 (355)
Q Consensus 102 ~~~~~~fA~~h~L~ivti~dli~yr~ 127 (355)
+...++||++.|++.||++.+-+.+.
T Consensus 25 rr~tE~~Are~G~~~IT~ev~~~AK~ 50 (62)
T 2l09_A 25 KARIEQLARQAEQDIVTPELVEQARL 50 (62)
T ss_dssp HHHHHHHHHHTTCSEECHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCeEcHHHHHHHHH
Confidence 34678999999999999998876553
No 68
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=20.77 E-value=68 Score=28.98 Aligned_cols=34 Identities=15% Similarity=0.250 Sum_probs=27.0
Q ss_pred CCcEEEEE-EeCCCCcccChhHHHHHHHhcCCeEE
Q 018477 84 EPVAVLCE-IVDDDGSMARLPKLRQFAQTENLKII 117 (355)
Q Consensus 84 ~Paavi~e-i~~~dg~~a~~~~~~~fA~~h~L~iv 117 (355)
.+.+++++ .-+..|.....+++.++|++||+.++
T Consensus 171 ~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li 205 (397)
T 3f9t_A 171 DVDGIIGIAGTTELGTIDNIEELSKIAKENNIYIH 205 (397)
T ss_dssp CCCEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEE
T ss_pred CCeEEEEECCCCCCCCCCCHHHHHHHHHHhCCeEE
Confidence 45555544 44567999999999999999999887
No 69
>2ae6_A Acetyltransferase, GNAT family; GCN5-related N-acetyltransferase (GNAT), alpha-beta, structu genomics, PSI, protein structure initiative; HET: GOL; 2.19A {Enterococcus faecalis} SCOP: d.108.1.1
Probab=20.69 E-value=96 Score=24.53 Aligned_cols=37 Identities=11% Similarity=0.108 Sum_probs=27.0
Q ss_pred HHHHHcCCCeeeecc--CCcccccccccCCceEEEEeec
Q 018477 266 QILRDLGVRTMKLMT--NNPSKYVGLKGYGLAIAGRIPL 302 (355)
Q Consensus 266 qILrdLGV~~irLLT--NnP~K~~aL~g~GieV~ervpl 302 (355)
+.++.+|+++|.|-+ .|+.-+...+.+|.+.+++.+-
T Consensus 108 ~~a~~~g~~~i~l~v~~~N~~A~~~Yek~GF~~~~~~~~ 146 (166)
T 2ae6_A 108 DMAEISGIHKLSLRVMATNQEAIRFYEKHGFVQEAHFKE 146 (166)
T ss_dssp HHHHHHTCCEEEEEEETTCHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHCCCCEEEEEeecCCHHHHHHHHHcCCEEeeEEcc
Confidence 346678999998854 4655566678899998887663
No 70
>1z4e_A Transcriptional regulator; nysgxrc target T2017, GNAT fold, structural genomics, PSI, P structure initiative; 2.00A {Bacillus halodurans} SCOP: d.108.1.1
Probab=20.48 E-value=80 Score=24.33 Aligned_cols=55 Identities=20% Similarity=0.363 Sum_probs=35.8
Q ss_pred EEEeCCCCCCcchHHHhhhhhcccCCCCchhhhhhcCCCCCccChhHHHHHHHHcCCCeeeecc--CCcccccccccCCc
Q 018477 217 VYLRGHEGRGIGLGHKLRAYNLQDDGHDTVEANEELGLPVDSREYGIGAQILRDLGVRTMKLMT--NNPSKYVGLKGYGL 294 (355)
Q Consensus 217 vYLr~qEgrgiGl~~kl~ay~lq~~g~dt~~An~~lg~~~D~RdygigAqILrdLGV~~irLLT--NnP~K~~aL~g~Gi 294 (355)
+|+. ++-||.|+..+|-.+. .+..+..|+++|.|-+ .|+.-+.-.+.+|.
T Consensus 91 l~V~-p~~rg~GiG~~Ll~~~---------------------------~~~a~~~g~~~i~l~v~~~N~~a~~~Y~k~GF 142 (153)
T 1z4e_A 91 VRTH-SAARGQGIGSQLVCWA---------------------------IERAKERGCHLIQLTTDKQRPDALRFYEQLGF 142 (153)
T ss_dssp EEEC-TTSTTSSHHHHHHHHH---------------------------HHHHHHTTEEEEEEEEETTCTTHHHHHHHHTC
T ss_pred EEEC-HHHcCCCHHHHHHHHH---------------------------HHHHHHcCCCEEEEEEccCChHHHHHHHHcCC
Confidence 5665 6777777776664321 3345678999888865 45555555678888
Q ss_pred eEEEE
Q 018477 295 AIAGR 299 (355)
Q Consensus 295 eV~er 299 (355)
+.+..
T Consensus 143 ~~~~~ 147 (153)
T 1z4e_A 143 KASHE 147 (153)
T ss_dssp EEEEE
T ss_pred ceece
Confidence 87653
No 71
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=20.39 E-value=90 Score=28.14 Aligned_cols=34 Identities=15% Similarity=0.289 Sum_probs=27.8
Q ss_pred CCcEEEEEEe-CCCCcccChhHHHHHHHhcCCeEE
Q 018477 84 EPVAVLCEIV-DDDGSMARLPKLRQFAQTENLKII 117 (355)
Q Consensus 84 ~Paavi~ei~-~~dg~~a~~~~~~~fA~~h~L~iv 117 (355)
.+.+++++-. +..|.....+++.++|++||+.++
T Consensus 147 ~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~li 181 (371)
T 2e7j_A 147 EVVLALITYPDGNYGNLPDVKKIAKVCSEYDVPLL 181 (371)
T ss_dssp CEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEE
T ss_pred CeEEEEEECCCCCCcccCCHHHHHHHHHHcCCeEE
Confidence 4566666655 557999999999999999999887
No 72
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=20.38 E-value=1.1e+02 Score=30.11 Aligned_cols=49 Identities=18% Similarity=0.148 Sum_probs=39.1
Q ss_pred chhHHHHHHHHHhCCCCcEEEEEEeC-CCCcccChhHHHHHHHhcCCeEE
Q 018477 69 GHTEASVDLAVLAGLEPVAVLCEIVD-DDGSMARLPKLRQFAQTENLKII 117 (355)
Q Consensus 69 GhtEaavdL~rlAgl~Paavi~ei~~-~dg~~a~~~~~~~fA~~h~L~iv 117 (355)
-.-|.+++=.+..|..|.+|++...+ ..|.....+++.++|++||+.++
T Consensus 233 ~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~l~~I~~ia~~~~~~lh 282 (511)
T 3vp6_A 233 ADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLH 282 (511)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCCHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHHhcCCCcEEEEEecCCCCCcccccHHHHHHHHHHcCCEEE
Confidence 34566666566678889888887665 57999999999999999999875
No 73
>3eo4_A Uncharacterized protein MJ1062; APC60792.2,MJ_1062,methanocaldococcus jannaschii DSM 2661, S genomics, PSI-2; HET: MES PG6; 2.19A {Methanocaldococcus jannaschii}
Probab=20.37 E-value=53 Score=25.69 Aligned_cols=34 Identities=15% Similarity=0.213 Sum_probs=26.2
Q ss_pred HHHcCCCeeeec--cCCcccccccccCCceEEEEee
Q 018477 268 LRDLGVRTMKLM--TNNPSKYVGLKGYGLAIAGRIP 301 (355)
Q Consensus 268 LrdLGV~~irLL--TNnP~K~~aL~g~GieV~ervp 301 (355)
++.+|+++|.|- .+|+.-+...+.+|.+.+++.+
T Consensus 119 a~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~g~~~ 154 (164)
T 3eo4_A 119 LKNIGYKKAHARILENNIRSIKLFESLGFKKTKKGR 154 (164)
T ss_dssp HHHTTCCEEEEEEETTCHHHHHHHHHTTCEEEEECS
T ss_pred HHhCCCcEEEEEeCCCCHHHHHHHHHCCCEEEeeec
Confidence 477899998875 4566566778899999988765
No 74
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=20.27 E-value=85 Score=28.87 Aligned_cols=34 Identities=21% Similarity=0.271 Sum_probs=28.0
Q ss_pred CCcEEEEEEe-CCCCcccChhHHHHHHHhcCCeEE
Q 018477 84 EPVAVLCEIV-DDDGSMARLPKLRQFAQTENLKII 117 (355)
Q Consensus 84 ~Paavi~ei~-~~dg~~a~~~~~~~fA~~h~L~iv 117 (355)
.+.+|+++-. |..|.....+++.++|++||+.++
T Consensus 177 ~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li 211 (401)
T 1fc4_A 177 RHVLIATDGVFSMDGVIANLKGVCDLADKYDALVM 211 (401)
T ss_dssp SSEEEEEESEETTTTEECCHHHHHHHHHHTTEEEE
T ss_pred CceEEEEeCCcCCCCCCCCHHHHHHHHHHcCCEEE
Confidence 5667766554 668999999999999999998877
No 75
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=20.17 E-value=98 Score=28.41 Aligned_cols=39 Identities=15% Similarity=0.202 Sum_probs=29.2
Q ss_pred HHhCCCCcEEEEEEe-CCCCcccC----hhHHHHHHHhcCCeEE
Q 018477 79 VLAGLEPVAVLCEIV-DDDGSMAR----LPKLRQFAQTENLKII 117 (355)
Q Consensus 79 rlAgl~Paavi~ei~-~~dg~~a~----~~~~~~fA~~h~L~iv 117 (355)
++..-.+.+|+++-. |+.|..+. .+++.++|++||+.++
T Consensus 177 ~~l~~~~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li 220 (392)
T 3ruy_A 177 AAITPNTAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFV 220 (392)
T ss_dssp HHCCTTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEE
T ss_pred HHhccCeEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEE
Confidence 333345677777555 45688887 8999999999999887
Done!