Query 018479
Match_columns 355
No_of_seqs 284 out of 1570
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 15:55:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018479.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018479hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hcn_A Ferrochelatase, mitocho 100.0 3.2E-74 1.1E-78 563.7 31.7 263 2-268 59-327 (359)
2 1lbq_A Ferrochelatase; rossman 100.0 1.7E-72 5.9E-77 552.8 23.0 261 2-269 64-329 (362)
3 2h1v_A Ferrochelatase; rossman 100.0 2.8E-69 9.5E-74 521.1 28.1 257 2-267 47-309 (310)
4 2xvy_A Chelatase, putative; me 100.0 2.9E-34 9.9E-39 270.6 17.8 234 5-267 15-266 (269)
5 2jh3_A Ribosomal protein S2-re 100.0 5.9E-32 2E-36 273.2 14.0 239 4-271 8-270 (474)
6 2xwp_A Sirohydrochlorin cobalt 100.0 3.3E-27 1.1E-31 222.4 24.6 232 4-267 7-257 (264)
7 3lyh_A Cobalamin (vitamin B12) 99.4 2E-12 6.9E-17 107.9 11.0 112 4-123 10-123 (126)
8 2xws_A Sirohydrochlorin cobalt 99.3 3.3E-12 1.1E-16 107.1 9.5 112 4-123 8-128 (133)
9 1tjn_A Sirohydrochlorin cobalt 99.3 2.9E-12 9.8E-17 111.2 9.0 113 4-124 29-150 (156)
10 3lyh_A Cobalamin (vitamin B12) 99.2 2E-10 6.7E-15 95.7 14.7 117 129-267 5-122 (126)
11 2xws_A Sirohydrochlorin cobalt 99.1 3.6E-10 1.2E-14 94.6 10.2 118 130-268 4-128 (133)
12 1tjn_A Sirohydrochlorin cobalt 98.9 4.1E-09 1.4E-13 91.2 10.5 118 130-268 25-149 (156)
13 2xvy_A Chelatase, putative; me 98.7 1.8E-07 6.3E-12 87.3 14.9 126 129-268 9-141 (269)
14 2xwp_A Sirohydrochlorin cobalt 98.7 3.9E-08 1.3E-12 91.9 9.8 109 5-122 143-257 (264)
15 2h1v_A Ferrochelatase; rossman 98.4 3E-06 1E-10 81.1 12.3 101 156-269 61-168 (310)
16 1lbq_A Ferrochelatase; rossman 98.3 7.1E-06 2.4E-10 80.2 13.4 113 149-269 71-189 (362)
17 2jh3_A Ribosomal protein S2-re 98.2 7.7E-07 2.6E-11 89.8 5.7 122 130-268 4-136 (474)
18 3hcn_A Ferrochelatase, mitocho 98.2 1.4E-05 4.6E-10 78.1 13.7 116 147-270 64-185 (359)
19 2bhw_A Chlorophyll A-B binding 97.9 6.6E-06 2.3E-10 75.6 3.9 34 316-349 177-210 (232)
20 3pl9_A Chlorophyll A-B binding 97.8 1.2E-05 4.2E-10 73.8 4.0 35 315-349 193-227 (243)
21 2wsc_2 LHCA2, type II chloroph 97.6 7.3E-06 2.5E-10 76.6 -0.2 38 312-349 214-251 (269)
22 2wsc_3 LHCA3, type II chloroph 97.5 1.5E-05 5E-10 74.9 0.6 36 314-349 223-258 (276)
23 2wsc_1 AT3G54890, LHCA1; photo 97.3 5.1E-05 1.8E-09 69.9 0.7 36 315-350 187-223 (241)
24 2wsc_4 Chlorophyll A-B binding 97.1 5.3E-05 1.8E-09 70.3 -1.1 37 310-346 86-122 (251)
25 2wsc_3 LHCA3, type II chloroph 96.4 6.1E-05 2.1E-09 70.6 -6.2 33 313-345 97-129 (276)
26 3pl9_A Chlorophyll A-B binding 96.4 0.0013 4.4E-08 60.4 2.7 31 312-342 89-119 (243)
27 2wsc_4 Chlorophyll A-B binding 96.4 0.00085 2.9E-08 62.1 1.5 33 316-349 201-233 (251)
28 2wsc_2 LHCA2, type II chloroph 96.0 0.0021 7.2E-08 60.0 2.1 35 311-345 98-132 (269)
29 2bhw_A Chlorophyll A-B binding 95.1 0.013 4.4E-07 53.6 3.6 26 316-341 62-87 (232)
30 2wsc_1 AT3G54890, LHCA1; photo 85.0 0.037 1.3E-06 50.8 -4.5 27 314-340 82-108 (241)
31 3flu_A DHDPS, dihydrodipicolin 55.3 1.1E+02 0.0036 28.1 11.3 93 152-259 59-158 (297)
32 3daq_A DHDPS, dihydrodipicolin 55.0 1.1E+02 0.0039 27.9 11.4 94 152-260 54-154 (292)
33 3si9_A DHDPS, dihydrodipicolin 54.0 1.4E+02 0.0047 27.7 12.0 94 152-260 74-174 (315)
34 3l21_A DHDPS, dihydrodipicolin 52.1 1.3E+02 0.0043 27.7 11.3 93 152-259 67-166 (304)
35 3m5v_A DHDPS, dihydrodipicolin 51.3 1.5E+02 0.005 27.2 12.9 95 152-261 59-161 (301)
36 3ff4_A Uncharacterized protein 50.9 8.9 0.0003 30.9 2.7 45 191-248 69-113 (122)
37 3qze_A DHDPS, dihydrodipicolin 47.6 1.7E+02 0.0059 27.0 11.9 93 152-259 75-174 (314)
38 3na8_A Putative dihydrodipicol 45.4 1.9E+02 0.0064 26.7 11.7 92 152-258 76-174 (315)
39 3bdk_A D-mannonate dehydratase 44.9 22 0.00074 34.4 4.9 65 187-253 26-91 (386)
40 3p6l_A Sugar phosphate isomera 44.2 1.4E+02 0.0048 25.8 9.9 11 230-240 96-106 (262)
41 3eb2_A Putative dihydrodipicol 43.9 1.8E+02 0.0063 26.5 11.0 93 152-259 56-155 (300)
42 3nav_A Tryptophan synthase alp 43.6 1.9E+02 0.0065 26.3 14.9 89 154-261 83-172 (271)
43 3lup_A DEGV family protein; PS 42.9 27 0.00093 32.2 5.0 61 42-110 65-128 (285)
44 2r8w_A AGR_C_1641P; APC7498, d 42.1 2.2E+02 0.0074 26.5 11.8 94 152-260 86-186 (332)
45 1f6k_A N-acetylneuraminate lya 39.4 2.2E+02 0.0075 25.8 12.0 94 152-260 56-156 (293)
46 1pq4_A Periplasmic binding pro 39.2 1.4E+02 0.0047 27.2 9.3 132 101-262 132-281 (291)
47 2wkj_A N-acetylneuraminate lya 39.1 2.3E+02 0.0078 25.9 11.9 94 152-260 63-164 (303)
48 1xky_A Dihydrodipicolinate syn 38.5 2.1E+02 0.0073 26.1 10.5 93 152-259 64-163 (301)
49 2v9d_A YAGE; dihydrodipicolini 37.6 1.9E+02 0.0066 27.1 10.2 93 152-259 83-182 (343)
50 2duw_A Putative COA-binding pr 37.5 17 0.00059 29.8 2.5 46 190-247 80-125 (145)
51 2vc6_A MOSA, dihydrodipicolina 37.5 2.4E+02 0.008 25.6 12.2 94 152-260 52-152 (292)
52 3rpe_A MDAB, modulator of drug 37.3 1.2E+02 0.004 26.7 8.1 69 12-86 42-110 (218)
53 3e96_A Dihydrodipicolinate syn 37.0 2.5E+02 0.0086 25.8 11.0 92 152-259 64-158 (316)
54 1o5k_A DHDPS, dihydrodipicolin 36.9 2.5E+02 0.0085 25.7 11.9 93 152-259 64-163 (306)
55 3vow_A Probable DNA DC->DU-edi 36.2 23 0.00078 31.0 3.1 93 9-121 95-189 (190)
56 2yxg_A DHDPS, dihydrodipicolin 35.8 2.5E+02 0.0085 25.4 12.6 93 152-259 52-151 (289)
57 1iuk_A Hypothetical protein TT 35.7 17 0.00058 29.6 2.1 47 191-249 81-127 (140)
58 2ojp_A DHDPS, dihydrodipicolin 35.6 2.5E+02 0.0086 25.4 11.6 94 152-260 53-153 (292)
59 3mxo_A Serine/threonine-protei 35.2 1.4E+02 0.0049 25.0 8.2 112 8-144 30-150 (202)
60 3qfe_A Putative dihydrodipicol 35.1 2.7E+02 0.0093 25.6 12.2 94 152-260 63-166 (318)
61 3d0c_A Dihydrodipicolinate syn 34.7 2.5E+02 0.0086 25.8 10.4 91 152-259 64-158 (314)
62 2hl0_A Threonyl-tRNA synthetas 34.5 1.1E+02 0.0037 25.5 6.8 20 202-221 70-89 (143)
63 1tz9_A Mannonate dehydratase; 33.6 71 0.0024 29.9 6.5 65 186-252 15-81 (367)
64 3tak_A DHDPS, dihydrodipicolin 33.4 2.7E+02 0.0093 25.2 13.6 93 152-259 53-152 (291)
65 2ehh_A DHDPS, dihydrodipicolin 33.2 2.8E+02 0.0095 25.1 12.8 93 152-259 52-151 (294)
66 3v4k_A DNA DC->DU-editing enzy 32.9 54 0.0018 28.9 5.0 93 9-121 109-202 (203)
67 3jr7_A Uncharacterized EGV fam 32.5 99 0.0034 28.5 7.1 64 42-110 81-144 (298)
68 2rfg_A Dihydrodipicolinate syn 32.5 2.1E+02 0.0072 26.1 9.4 94 152-260 52-152 (297)
69 3fkr_A L-2-keto-3-deoxyarabona 32.0 3E+02 0.01 25.2 12.8 94 152-260 60-162 (309)
70 3nyi_A FAT acid-binding protei 31.5 55 0.0019 30.2 5.1 64 42-110 66-132 (297)
71 3pl5_A SMU_165, putative uncha 31.0 65 0.0022 30.2 5.6 63 42-109 97-162 (320)
72 3fdj_A DEGV family protein; GU 30.2 1.7E+02 0.0059 26.5 8.3 63 42-110 61-123 (278)
73 3dnf_A ISPH, LYTB, 4-hydroxy-3 30.2 93 0.0032 29.0 6.4 69 96-164 33-111 (297)
74 3lub_A Putative creatinine ami 30.0 86 0.0029 28.3 6.1 27 17-43 49-76 (254)
75 2yv2_A Succinyl-COA synthetase 30.0 48 0.0016 30.6 4.4 43 190-239 81-123 (297)
76 3cx3_A Lipoprotein; zinc-bindi 29.9 3E+02 0.01 24.7 9.9 137 101-263 119-277 (284)
77 2csu_A 457AA long hypothetical 29.4 52 0.0018 32.3 4.8 49 191-240 75-123 (457)
78 3h5d_A DHDPS, dihydrodipicolin 28.9 3.4E+02 0.012 24.9 11.5 94 152-260 59-160 (311)
79 1y81_A Conserved hypothetical 28.5 30 0.001 28.1 2.5 45 191-247 80-124 (138)
80 3nco_A Endoglucanase fncel5A; 28.4 3.2E+02 0.011 24.4 10.0 131 44-213 41-178 (320)
81 3v4k_A DNA DC->DU-editing enzy 28.3 82 0.0028 27.7 5.3 64 155-225 111-175 (203)
82 3lmz_A Putative sugar isomeras 28.1 2.3E+02 0.0078 24.4 8.6 93 154-264 31-124 (257)
83 3b4u_A Dihydrodipicolinate syn 28.0 3.4E+02 0.012 24.6 11.4 93 152-259 55-158 (294)
84 3s5o_A 4-hydroxy-2-oxoglutarat 27.9 3.5E+02 0.012 24.7 10.4 93 152-259 66-167 (307)
85 3vnd_A TSA, tryptophan synthas 27.8 3.4E+02 0.012 24.5 15.9 59 193-261 112-170 (267)
86 3lm3_A Uncharacterized protein 27.7 1.3E+02 0.0045 28.5 6.8 103 14-116 51-163 (449)
87 3dmy_A Protein FDRA; predicted 27.5 52 0.0018 32.8 4.4 43 190-240 46-88 (480)
88 4dpp_A DHDPS 2, dihydrodipicol 27.3 2.3E+02 0.008 26.9 8.9 138 94-260 62-209 (360)
89 3szu_A ISPH, 4-hydroxy-3-methy 27.0 68 0.0023 30.3 4.9 67 97-165 45-124 (328)
90 2d59_A Hypothetical protein PH 26.7 43 0.0015 27.2 3.1 46 191-248 88-133 (144)
91 2ejb_A Probable aromatic acid 26.6 53 0.0018 28.4 3.8 50 186-239 127-179 (189)
92 3hh8_A Metal ABC transporter s 26.6 2.8E+02 0.0094 25.2 9.1 139 101-262 123-285 (294)
93 1oi7_A Succinyl-COA synthetase 26.5 58 0.002 29.9 4.3 42 191-239 75-116 (288)
94 2yv1_A Succinyl-COA ligase [AD 26.2 49 0.0017 30.4 3.8 42 191-239 81-122 (294)
95 3gxh_A Putative phosphatase (D 26.0 2.1E+02 0.007 23.2 7.4 67 190-266 27-96 (157)
96 3a5f_A Dihydrodipicolinate syn 26.0 2E+02 0.0067 26.1 7.9 93 152-259 53-152 (291)
97 3fkr_A L-2-keto-3-deoxyarabona 26.0 3.1E+02 0.011 25.1 9.3 53 31-87 76-134 (309)
98 1uta_A FTSN, MSGA, cell divisi 25.3 44 0.0015 24.3 2.7 17 16-32 20-36 (81)
99 2hmc_A AGR_L_411P, dihydrodipi 25.3 2.1E+02 0.007 26.9 8.1 66 190-258 101-174 (344)
100 3rjz_A N-type ATP pyrophosphat 25.1 1.3E+02 0.0044 26.9 6.2 41 157-211 106-146 (237)
101 1sbz_A Probable aromatic acid 24.7 57 0.0019 28.4 3.7 51 186-240 123-176 (197)
102 3e96_A Dihydrodipicolinate syn 24.3 2.4E+02 0.0081 26.0 8.2 53 30-87 79-134 (316)
103 2nly_A BH1492 protein, diverge 24.2 3.8E+02 0.013 23.9 10.5 88 31-118 26-125 (245)
104 3zqu_A Probable aromatic acid 23.7 60 0.0021 28.5 3.7 50 186-239 140-192 (209)
105 2o1e_A YCDH; alpha-beta protei 22.8 3.7E+02 0.013 24.6 9.2 55 101-167 132-186 (312)
106 2ojp_A DHDPS, dihydrodipicolin 22.7 3.5E+02 0.012 24.4 9.0 51 32-86 70-123 (292)
107 2fp4_A Succinyl-COA ligase [GD 22.5 59 0.002 30.1 3.6 43 191-240 82-125 (305)
108 1t5b_A Acyl carrier protein ph 22.1 3.2E+02 0.011 22.2 8.7 31 7-37 8-40 (201)
109 3ojc_A Putative aspartate/glut 21.7 1.3E+02 0.0043 26.5 5.5 20 44-63 63-82 (231)
110 3flu_A DHDPS, dihydrodipicolin 21.5 4.4E+02 0.015 23.8 9.4 53 31-87 75-130 (297)
111 2wkj_A N-acetylneuraminate lya 21.4 4E+02 0.014 24.2 9.1 53 31-87 79-134 (303)
112 2yxg_A DHDPS, dihydrodipicolin 21.0 4.2E+02 0.014 23.8 9.1 53 31-87 68-123 (289)
113 3e2v_A 3'-5'-exonuclease; stru 21.0 78 0.0027 30.8 4.1 31 36-66 30-60 (401)
114 2nu8_A Succinyl-COA ligase [AD 21.0 91 0.0031 28.4 4.5 42 191-239 75-116 (288)
115 1o97_C Electron transferring f 20.8 4.1E+02 0.014 23.7 8.9 28 38-65 61-88 (264)
116 3t5s_A Gilaa.00834.A, macropha 20.8 1.9E+02 0.0066 23.1 6.0 73 105-181 33-122 (135)
117 1f6k_A N-acetylneuraminate lya 20.7 4.6E+02 0.016 23.6 9.3 53 31-87 72-127 (293)
118 1olt_A Oxygen-independent copr 20.7 5.6E+02 0.019 24.5 16.8 134 108-264 84-231 (457)
119 2ehh_A DHDPS, dihydrodipicolin 20.6 4.6E+02 0.016 23.6 9.3 53 31-87 68-123 (294)
120 3ipz_A Monothiol glutaredoxin- 20.4 1.4E+02 0.0047 22.7 4.8 61 189-261 3-68 (109)
121 1o5k_A DHDPS, dihydrodipicolin 20.3 3.9E+02 0.013 24.4 8.8 52 31-86 80-134 (306)
122 2xio_A Putative deoxyribonucle 20.3 1.5E+02 0.0052 26.7 5.9 27 40-66 23-49 (301)
123 3ipw_A Hydrolase TATD family p 20.1 1.2E+02 0.004 28.4 5.1 28 40-67 48-75 (325)
No 1
>3hcn_A Ferrochelatase, mitochondrial; metal selectivity, disease mutation, heme biosynthesis, iron, iron-sulfur, lyase, membrane, metal-BIN mitochondrion; HET: CHD HEM GOL; 1.60A {Homo sapiens} SCOP: c.92.1.1 PDB: 2qd3_A* 2qd5_A* 2qd4_A* 3hco_A* 3hcr_A* 2qd1_A* 2hre_A* 3hcp_A* 2qd2_A* 2hrc_A* 1hrk_A* 4f4d_A* 3aqi_A* 2pnj_A* 2po5_A* 2po7_A*
Probab=100.00 E-value=3.2e-74 Score=563.66 Aligned_cols=263 Identities=40% Similarity=0.634 Sum_probs=245.8
Q ss_pred cccccCCCchhHHHHHHHHHHHHHHhccC---CCceEEEeeecCCCCHHHHHHHHHHcCCCEEEEeecCccccccchHHH
Q 018479 2 YFCFVLVLSLAIISCIQAEELRKSLWEKN---LPAKVYVGMRYWHPFTEEAIEQIKRDGITKLVVLPLYPQFSISTSGSS 78 (355)
Q Consensus 2 y~~igggSPL~~~t~~qa~~l~~~L~~~~---~~~~V~~amry~~P~i~~~l~~l~~~G~~~IvvlPlyPqyS~~ttgs~ 78 (355)
|++|||||||+.+|++|+++|++.|++.+ .+++|++|||||+|+|++++++|+++|+++|+++|||||||++||||+
T Consensus 59 Y~~igggSPL~~~t~~Q~~~L~~~L~~~~~~~~~~~V~~amry~~P~i~~~l~~l~~~G~~~ivvlPlyPqyS~~Ttgs~ 138 (359)
T 3hcn_A 59 YRRIGGGSPIKIWTSKQGEGMVKLLDELSPNTAPHKYYIGFRYVHPLTEEAIEEMERDGLERAIAFTQYPQYSCSTTGSS 138 (359)
T ss_dssp HHHTTSSCCHHHHHHHHHHHHHHHHHHHCGGGCSEEEEEEESSSSSBHHHHHHHHHHTTCSEEEEEESCSSCCTTTHHHH
T ss_pred HHHcCCCCcHHHHHHHHHHHHHHHHhhhcccccCceEEEEEeeCCCCHHHHHHHHHhcCCCeEEEEECCccccccchhhH
Confidence 89999999999999999999999998653 368999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccccCCceeEEecCCCCChHHHHHHHHHHHHHHHhCCC--CCceEEEEeeCCCchhhhcccCCchHHHHH
Q 018479 79 LRLLESIFREDEYLVNMQHTVIPSWYQREGYITAMANLIEKELQNFDS--PEQVMIFFSAHGVPLAYVEEAGDPYKAEME 156 (355)
Q Consensus 79 ~~~~~e~~~~~~~~~~~~~~~i~~~~~~p~yi~a~~~~I~~~l~~~~~--~~~~~llfsaHgiP~~~v~~~GDpY~~~~~ 156 (355)
++++.+.+++.+..+.+++++|++|++||+||+|++++|++++++++. +++++|||||||+|++++ ++||||+.||+
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~yI~a~a~~I~~~l~~~~~~~~~~~~LlfSaHgiP~~~~-~~GDpY~~q~~ 217 (359)
T 3hcn_A 139 LNAIYRYYNQVGRKPTMKWSTIDRWPTHHLLIQCFADHILKELDHFPLEKRSEVVILFSAHSLPMSVV-NRGDPYPQEVS 217 (359)
T ss_dssp HHHHHHHHHHTTCCCSSEEEEECCCTTCHHHHHHHHHHHHHHHTTSCTTTGGGCEEEEEEECCBHHHH-TTTCSHHHHHH
T ss_pred HHHHHHHHHHhccCCCCceEEeCCccCCHHHHHHHHHHHHHHHHhCCccccCCcEEEEEcCCChHhhc-ccCCCHHHHHH
Confidence 999988877655456778999999999999999999999999988753 245799999999999999 79999999999
Q ss_pred HHHHHHHHHhcccccCCceeEEEEecccCCCCCCCcHHHHHHHHHhcCCceEEEEcceecccchhhHHHHHHHH-HHHHH
Q 018479 157 ECVDLIMEELEKRKITNAYTLAYQSRVGPVEWLKPYTDETIIKLGQKGVKSLLAVPISFVSEHIETLEEIDVEY-KELAL 235 (355)
Q Consensus 157 ~ta~~v~e~l~~~~~~~~~~l~fQS~~G~~~Wl~P~~~d~l~~L~~~G~k~VvVvP~gFvsD~lETl~eid~e~-~e~a~ 235 (355)
+|+++|+++|+.. ++|.++||||+||.+||+|+|+|+|++|+++|+|+|+|+||||++||+|||||||+|+ ++.|.
T Consensus 218 ~t~~lv~e~Lg~~---~~~~l~~QSr~G~~~WL~P~t~d~l~~L~~~G~k~vvv~P~gFvsD~lETL~Eid~E~~~e~a~ 294 (359)
T 3hcn_A 218 ATVQKVMERLEYC---NPYRLVWQSKVGPMPWLGPQTDESIKGLCERGRKNILLVPIAFTSDHIETLYELDIEYSQVLAK 294 (359)
T ss_dssp HHHHHHHHHTTTC---SCEEEEEECCSCSSCBSSSBHHHHHHHHHHTTCCEEEEECTTCCSCCCCCHHHHCHHHHHHHHH
T ss_pred HHHHHHHHHcCCC---CCEEEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCeEEEECCccchhhHHhHHHHHHHHHHHHHH
Confidence 9999999999864 3699999999999999999999999999999999999999999999999999999998 58899
Q ss_pred hcCCceEEEcCCCCCCHHHHHHHHHHHHHhCCC
Q 018479 236 KSGIEKWGRVPALGCEATFISDLADAVIESLPY 268 (355)
Q Consensus 236 ~~G~~~~~rv~~ln~~p~fi~~La~~V~e~l~~ 268 (355)
++|+.+|.|+||||+||.||++|+++|.+++.+
T Consensus 295 e~G~~~~~rip~LNd~p~fi~~La~lv~~~l~~ 327 (359)
T 3hcn_A 295 ECGVENIRRAESLNGNPLFSKALADLVHSHIQS 327 (359)
T ss_dssp HTCCCEEEECCCSTTCHHHHHHHHHHHHHHHHH
T ss_pred hCCCceEEEcCCCCCCHHHHHHHHHHHHHHHhc
Confidence 999988999999999999999999999998765
No 2
>1lbq_A Ferrochelatase; rossmann fold, PI-helix, lyase; 2.40A {Saccharomyces cerevisiae} SCOP: c.92.1.1 PDB: 1l8x_A
Probab=100.00 E-value=1.7e-72 Score=552.83 Aligned_cols=261 Identities=37% Similarity=0.524 Sum_probs=244.5
Q ss_pred cccccCCCchhHHHHHHHHHHHHHHhccC---CCceEEEeeecCCCCHHHHHHHHHHcCCCEEEEeecCccccccchHHH
Q 018479 2 YFCFVLVLSLAIISCIQAEELRKSLWEKN---LPAKVYVGMRYWHPFTEEAIEQIKRDGITKLVVLPLYPQFSISTSGSS 78 (355)
Q Consensus 2 y~~igggSPL~~~t~~qa~~l~~~L~~~~---~~~~V~~amry~~P~i~~~l~~l~~~G~~~IvvlPlyPqyS~~ttgs~ 78 (355)
|++|||||||+.+|++|+++|++.|++.+ .+++|++|||||+|+|+|++++|+++|+++|+++|||||||.+||||+
T Consensus 64 Y~~ig~gSPL~~~t~~q~~~L~~~L~~~~~~~~~~~V~~amry~~P~i~d~l~~l~~~G~~~ivvlPlyPqyS~~ttgs~ 143 (362)
T 1lbq_A 64 YREIGGGSPIRKWSEYQATEVCKILDKTCPETAPHKPYVAFRYAKPLTAETYKQMLKDGVKKAVAFSQYPHFSYSTTGSS 143 (362)
T ss_dssp HHHTTSSCSHHHHHHHHHHHHHHHHHHHCGGGCCEEEEEEESSSSSCHHHHHHHHHTTTCCEEEEEESCSSCCTTTHHHH
T ss_pred HHHcCCCCccHHHHHHHHHHHHHHHHhhcccCCCceEEeecccCCCCHHHHHHHHHHcCCCeEEEEecchhccccchhHH
Confidence 89999999999999999999999997643 478999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccccCCceeEEecCCCCChHHHHHHHHHHHHHHHhCCCC--CceEEEEeeCCCchhhhcccCCchHHHHH
Q 018479 79 LRLLESIFREDEYLVNMQHTVIPSWYQREGYITAMANLIEKELQNFDSP--EQVMIFFSAHGVPLAYVEEAGDPYKAEME 156 (355)
Q Consensus 79 ~~~~~e~~~~~~~~~~~~~~~i~~~~~~p~yi~a~~~~I~~~l~~~~~~--~~~~llfsaHgiP~~~v~~~GDpY~~~~~ 156 (355)
++++.+.+++.+..|.+++++|++|++||.||+|++++|++++++.+.+ ++++|||||||+|++++ ++||||..||+
T Consensus 144 ~~~i~~~l~~~~~~~~i~i~~i~~~~~~p~~I~ala~~I~~~l~~~~~~~~~~~~llfSaHglP~~~~-~~GDpY~~q~~ 222 (362)
T 1lbq_A 144 INELWRQIKALDSERSISWSVIDRWPTNEGLIKAFSENITKKLQEFPQPVRDKVVLLFSAHSLPMDVV-NTGDAYPAEVA 222 (362)
T ss_dssp HHHHHHHHHHHCTTCCSEEEEECCCTTCHHHHHHHHHHHHHHHHTSCSTTGGGCEEEEEEECCBHHHH-TTTCSHHHHHH
T ss_pred HHHHHHHHHhcccCCCceEEEecCCCCCHHHHHHHHHHHHHHHHhcCcccCCCeEEEEecCCCccccc-cCCCcHHHHHH
Confidence 9999988876666688889999999999999999999999999887533 56799999999999999 79999999999
Q ss_pred HHHHHHHHHhcccccCCceeEEEEecccCCCCCCCcHHHHHHHHHhcCCceEEEEcceecccchhhHHHHHHHHHHHHHh
Q 018479 157 ECVDLIMEELEKRKITNAYTLAYQSRVGPVEWLKPYTDETIIKLGQKGVKSLLAVPISFVSEHIETLEEIDVEYKELALK 236 (355)
Q Consensus 157 ~ta~~v~e~l~~~~~~~~~~l~fQS~~G~~~Wl~P~~~d~l~~L~~~G~k~VvVvP~gFvsD~lETl~eid~e~~e~a~~ 236 (355)
+|+++|+++++.. .+|.++||||+||.+||+|+|+|+|++| ++|+|+|+|+||||++||+|||||||+|+++.|.+
T Consensus 223 ~ta~ll~e~lg~~---~~~~~~fQSr~G~~~WL~P~t~~~l~~L-~~G~k~vvVvP~gFvsD~lETL~eid~e~~e~~~~ 298 (362)
T 1lbq_A 223 ATVYNIMQKLKFK---NPYRLVWQSQVGPKPWLGAQTAEIAEFL-GPKVDGLMFIPIAFTSDHIETLHEIDLGVIGESEY 298 (362)
T ss_dssp HHHHHHHHHTTTC---SCEEEEEECCCSSSCBCSCBHHHHHHHH-GGGCSCEEEECTTCSSCCHHHHTCCCCCCCTTCTT
T ss_pred HHHHHHHHHcCCC---CCEEEEEECCCCCcccCCCCHHHHHHHH-HcCCCeEEEECCeechhhHhhHHHHHHHHHHHHHh
Confidence 9999999999864 2599999999999999999999999999 99999999999999999999999999999999999
Q ss_pred cCCceEEEcCCCCCCHHHHHHHHHHHHHhCCCC
Q 018479 237 SGIEKWGRVPALGCEATFISDLADAVIESLPYV 269 (355)
Q Consensus 237 ~G~~~~~rv~~ln~~p~fi~~La~~V~e~l~~~ 269 (355)
+|. |.|+||||+||.|+++|+++|.+++.+.
T Consensus 299 ~G~--~~~~p~Ln~~p~fi~~L~~lv~~~l~~~ 329 (362)
T 1lbq_A 299 KDK--FKRCESLNGNQTFIEGMADLVKSHLQSN 329 (362)
T ss_dssp GGG--EEECCCCTTCHHHHHHHHHHHHHHHHHC
T ss_pred CCC--EEEcCCCCCCHHHHHHHHHHHHHHhccC
Confidence 993 9999999999999999999999987653
No 3
>2h1v_A Ferrochelatase; rossman fold, PI-helix, lyase; 1.20A {Bacillus subtilis} PDB: 2hk6_A 1c1h_A* 1ld3_A 1n0i_A 1ak1_A 3goq_A 1doz_A 2q2n_A* 3m4z_A 2h1w_A 2ac2_A 2q3j_A* 2ac4_A 2q2o_A* 1c9e_A* 2c8j_A
Probab=100.00 E-value=2.8e-69 Score=521.11 Aligned_cols=257 Identities=28% Similarity=0.445 Sum_probs=240.8
Q ss_pred cccccCCCchhHHHHHHHHHHHHHHhccCC--CceEEEeeecCCCCHHHHHHHHHHcCCCEEEEeecCccccccchHHHH
Q 018479 2 YFCFVLVLSLAIISCIQAEELRKSLWEKNL--PAKVYVGMRYWHPFTEEAIEQIKRDGITKLVVLPLYPQFSISTSGSSL 79 (355)
Q Consensus 2 y~~igggSPL~~~t~~qa~~l~~~L~~~~~--~~~V~~amry~~P~i~~~l~~l~~~G~~~IvvlPlyPqyS~~ttgs~~ 79 (355)
|++|||||||+.+|++|+++|++.|++++. +++|++|||||+|+|++++++|+++|+++|+++|||||||.+|+||++
T Consensus 47 Y~~ig~gSPl~~~t~~q~~~L~~~L~~~~~~~~~~V~~amry~~P~i~~~l~~l~~~G~~~ivvlPl~pq~s~st~g~~~ 126 (310)
T 2h1v_A 47 YEAIGGISPLAQITEQQAHNLEQHLNEIQDEITFKAYIGLAHIEPFIEDAVAEMHKDGITEAVSIVLAPHFSTFSVQSYN 126 (310)
T ss_dssp HHHTTCSHHHHHHHHHHHHHHHHHHHHHCSSEEEEEEEEESSSSSBHHHHHHHHHHTTCCEEEEEESSSSCCTTTHHHHH
T ss_pred HHHCCCCChhHHHHHHHHHHHHHHHHhcCCCCCceEeehhcCCCCCHHHHHHHHHhcCCCEEEEEECccchhhhhHHHHH
Confidence 899999999999999999999999987664 689999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccccCCceeEEecCCCCChHHHHHHHHHHHHHHHhCCC--CCceEEEEeeCCCchhhhcccCCchHHHHHH
Q 018479 80 RLLESIFREDEYLVNMQHTVIPSWYQREGYITAMANLIEKELQNFDS--PEQVMIFFSAHGVPLAYVEEAGDPYKAEMEE 157 (355)
Q Consensus 80 ~~~~e~~~~~~~~~~~~~~~i~~~~~~p~yi~a~~~~I~~~l~~~~~--~~~~~llfsaHgiP~~~v~~~GDpY~~~~~~ 157 (355)
+++.+.++..+ .++++++++|++||.||++++++|++++++.+. +++++|||||||+|.+++ ++||||+.||++
T Consensus 127 ~~i~~~l~~~~---~~~i~~i~~~~~~p~~i~a~a~~i~~~l~~~~~~~~~~~~llfs~HG~P~~~~-~~gDpY~~~~~~ 202 (310)
T 2h1v_A 127 KRAKEEAEKLG---GLTITSVESWYDEPKFVTYWVDRVKETYASMPEDERENAMLIVSAHSLPEKIK-EFGDPYPDQLHE 202 (310)
T ss_dssp HHHHHHHHHHC---SCEEEECCCCTTCHHHHHHHHHHHHHHHHHSCHHHHTSEEEEEEEECCBGGGG-GGTCCHHHHHHH
T ss_pred HHHHHHHHhCC---CCeEEEeCCCCCCHHHHHHHHHHHHHHHHhcccccCCCceEEEecCCCchhhc-cCCCChHHHHHH
Confidence 99988876533 568999999999999999999999999987642 356799999999999999 799999999999
Q ss_pred HHHHHHHHhcccccCCceeEEEEec-ccCCCCCCCcHHHHHHHHHhc-CCceEEEEcceecccchhhHHHHHHHHHHHHH
Q 018479 158 CVDLIMEELEKRKITNAYTLAYQSR-VGPVEWLKPYTDETIIKLGQK-GVKSLLAVPISFVSEHIETLEEIDVEYKELAL 235 (355)
Q Consensus 158 ta~~v~e~l~~~~~~~~~~l~fQS~-~G~~~Wl~P~~~d~l~~L~~~-G~k~VvVvP~gFvsD~lETl~eid~e~~e~a~ 235 (355)
|+++|+++++.. +|.+||||+ +|+.+||+|+|+++|++|+++ |+|+|+|+||||++||+|||+|||+|+++.+.
T Consensus 203 t~~~l~e~l~~~----~~~~~fqSrg~g~~~Wl~P~~~~~l~~l~~~~G~k~v~V~P~~F~sD~lEtl~ei~~e~~e~~~ 278 (310)
T 2h1v_A 203 SAKLIAEGAGVS----EYAVGWQSEGNTPDPWLGPDVQDLTRDLFEQKGYQAFVYVPVGFVADHLEVLYDNDYECKVVTD 278 (310)
T ss_dssp HHHHHHHHHTCS----CEEEEEESCCCCSSCBSSCBHHHHHHHHHHHHCCSEEEEECTTCCSSCHHHHTTTTTHHHHHHH
T ss_pred HHHHHHHHcCCC----CEEEEEEcCCCCCCCcCCCCHHHHHHHHHHHcCCceEEEECCcccccceeeHHHHHHHHHHHHH
Confidence 999999999762 599999996 999999999999999999999 99999999999999999999999999999999
Q ss_pred hcCCceEEEcCCCCCCHHHHHHHHHHHHHhCC
Q 018479 236 KSGIEKWGRVPALGCEATFISDLADAVIESLP 267 (355)
Q Consensus 236 ~~G~~~~~rv~~ln~~p~fi~~La~~V~e~l~ 267 (355)
++|. +|.|+||||+||.|+++|+++|.+++.
T Consensus 279 ~~G~-~~~~~p~ln~~p~~i~~l~~~v~~~l~ 309 (310)
T 2h1v_A 279 DIGA-SYYRPEMPNAKPEFIDALATVVLKKLG 309 (310)
T ss_dssp HHTC-EEECCCCCTTCHHHHHHHHHHHHHHTT
T ss_pred HcCC-eEEECCCCCCCHHHHHHHHHHHHHHhc
Confidence 9995 699999999999999999999998764
No 4
>2xvy_A Chelatase, putative; metal binding protein; HET: HEM; 1.70A {Desulfovibrio vulgaris} PDB: 2xvx_A* 2xvz_A*
Probab=100.00 E-value=2.9e-34 Score=270.57 Aligned_cols=234 Identities=16% Similarity=0.136 Sum_probs=187.9
Q ss_pred ccCCCchhHHHHHHHHHHHHHHhccCCCceEEEeeec------------CCCCHHHHHHHHHHcCCCEEEEeecCccccc
Q 018479 5 FVLVLSLAIISCIQAEELRKSLWEKNLPAKVYVGMRY------------WHPFTEEAIEQIKRDGITKLVVLPLYPQFSI 72 (355)
Q Consensus 5 igggSPL~~~t~~qa~~l~~~L~~~~~~~~V~~amry------------~~P~i~~~l~~l~~~G~~~IvvlPlyPqyS~ 72 (355)
+++||...+..+ ..+.+++.++++..+++|++||.+ ++|++++++++|+++|+++|+|+||||
T Consensus 15 v~hGS~~~~~~~-~~~~~~~~l~~~~~~~~V~~af~~~~i~~~l~~~~~~~P~i~~al~~l~~~G~~~ivV~Pl~l---- 89 (269)
T 2xvy_A 15 VAFGTSVEEARP-ALDKMGDRVRAAHPDIPVRWAYTAKMIRAKLRAEGIAAPSPAEALAGMAEEGFTHVAVQSLHT---- 89 (269)
T ss_dssp EECCCCCTTTTH-HHHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHTTCCCCCHHHHHHHHHHTTCCEEEEEECCS----
T ss_pred EeCCCCcHHHHH-HHHHHHHHHHHHCCCCeEEeehhhHHHHHHHHHcCCCCCCHHHHHHHHHHCCCCEEEEEecee----
Confidence 578887776665 456666666665567899999986 899999999999999999999999998
Q ss_pred cchHHHHHHHHHH---HHhccccCCceeEEecCCCCChHHHHHHHHHHHHHHHhCCCCCceEEEEeeCCCchhhhcccCC
Q 018479 73 STSGSSLRLLESI---FREDEYLVNMQHTVIPSWYQREGYITAMANLIEKELQNFDSPEQVMIFFSAHGVPLAYVEEAGD 149 (355)
Q Consensus 73 ~ttgs~~~~~~e~---~~~~~~~~~~~~~~i~~~~~~p~yi~a~~~~I~~~l~~~~~~~~~~llfsaHgiP~~~v~~~GD 149 (355)
++|+..+++.+. ++..+. ...+++++++|++||.|+++++++|+++++... +++.+|||++||+|. .||
T Consensus 90 -~~G~~~~di~~~~~~l~~~~~-~~~~i~~~~pl~~~p~~i~~la~~i~~~~~~~~-~~~~~lll~~HGs~~-----~~~ 161 (269)
T 2xvy_A 90 -IPGEEFHGLLETAHAFQGLPK-GLTRVSVGLPLIGTTADAEAVAEALVASLPADR-KPGEPVVFMGHGTPH-----PAD 161 (269)
T ss_dssp -SSSHHHHHHHHHHHHHTTCTT-SCSEEEEECCSSCSHHHHHHHHHHHHHHSCTTC-CTTCCEEEEECCCSS-----GGG
T ss_pred -eccHhHHHHHHHHHHHHHhhc-cCCeEEEeCCCCCCHHHHHHHHHHHHHhchhhc-cCCceEEEEECCCCh-----hhc
Confidence 355677788777 433221 125789999999999999999999999985421 244689999999995 245
Q ss_pred chHHHHHHHHHHHHHHhcccccCCceeEEEEecccCCCCCCCcHHHHHHHHHhcCCceEEEEcceec-ccchh--hHHHH
Q 018479 150 PYKAEMEECVDLIMEELEKRKITNAYTLAYQSRVGPVEWLKPYTDETIIKLGQKGVKSLLAVPISFV-SEHIE--TLEEI 226 (355)
Q Consensus 150 pY~~~~~~ta~~v~e~l~~~~~~~~~~l~fQS~~G~~~Wl~P~~~d~l~~L~~~G~k~VvVvP~gFv-sD~lE--Tl~ei 226 (355)
++.. ++++++++ ++ ..+|+ |..+| +|++++++++|.++|+|+|+|+|++|+ .||+| +..|+
T Consensus 162 ~~~~---~~a~~l~~-~~--------~~~~~---g~~e~-~P~~~~~l~~l~~~G~~~v~v~P~~l~~G~h~~~di~~~~ 225 (269)
T 2xvy_A 162 ICYP---GLQYYLWR-LD--------PDLLV---GTVEG-SPSFDNVMAELDVRKAKRVWLMPLMAVAGDHARNDMAGDE 225 (269)
T ss_dssp GHHH---HHHHHHHT-TC--------TTEEE---EESSS-SSCHHHHHHHHHHHTCSEEEEEEESSSCCHHHHTTTTCSS
T ss_pred cHHH---HHHHHHHh-cC--------CCEEE---EEcCC-CCCHHHHHHHHHHCCCCEEEEECCccccccchhhhcCCCc
Confidence 4432 46677754 22 24564 45678 899999999999999999999999877 59999 77788
Q ss_pred HHHHHHHHHhcCCceEEEcCCCCCCHHHHHHHHHHHHHhCC
Q 018479 227 DVEYKELALKSGIEKWGRVPALGCEATFISDLADAVIESLP 267 (355)
Q Consensus 227 d~e~~e~a~~~G~~~~~rv~~ln~~p~fi~~La~~V~e~l~ 267 (355)
+.++++.+.+.|+..+.++||||+||.|++++++++.+.+.
T Consensus 226 ~~~~~~~~~~~g~~~~~~~~~Lg~~p~~~~~l~~~~~~a~~ 266 (269)
T 2xvy_A 226 DDSWTSQLARRGIEAKPVLHGTAESDAVAAIWLRHLDDALA 266 (269)
T ss_dssp TTSHHHHHHHTTCEEEECCCCGGGCHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHcCcEEEEecCCCCCCHHHHHHHHHHHHHHHH
Confidence 88999999999998677999999999999999999998753
No 5
>2jh3_A Ribosomal protein S2-related protein; CBIX, SAD phasing, structural genomics, chelatase super-family fold, 4Fe-4S iron-sulphur cluster; 1.9A {Deinococcus radiodurans}
Probab=99.97 E-value=5.9e-32 Score=273.18 Aligned_cols=239 Identities=12% Similarity=0.050 Sum_probs=198.0
Q ss_pred cccCCCchhHHHHHHHHHHHHHHhccCC-----CceEEEeeecCCCCHHHHHHHHHHcCCCEEEEeecCccccccchHHH
Q 018479 4 CFVLVLSLAIISCIQAEELRKSLWEKNL-----PAKVYVGMRYWHPFTEEAIEQIKRDGITKLVVLPLYPQFSISTSGSS 78 (355)
Q Consensus 4 ~igggSPL~~~t~~qa~~l~~~L~~~~~-----~~~V~~amry~~P~i~~~l~~l~~~G~~~IvvlPlyPqyS~~ttgs~ 78 (355)
-+|||||++..++++.+.|++.+.+++. +..|++||..++|+|++++++| |+++|+|+|+|+++ ..++
T Consensus 8 LVgHGSp~~~~a~~~i~~La~~l~~~~~~~~L~~~~V~~Afle~~PsI~eaL~~L---G~~rVvVvPLfl~~----G~H~ 80 (474)
T 2jh3_A 8 LIGHGSHHHGESARATQQVAEALRGRGLAGHLPYDEVLEGYWQQEPGLRQVLRTV---AYSDVTVVPVFLSE----GYVT 80 (474)
T ss_dssp EEECCCSSCTHHHHHHHHHHHHHHHHHHTTCCSCSEEEEEESSSSSBTTTGGGGC---CBSEEEEEECCSCC----SHHH
T ss_pred EEeCCCCCChhHHHHHHHHHHHHHHhCCccccCCCeEEEEEcCCCCCHHHHHHHc---CcCeEEEEEEehhc----cHhH
Confidence 3689999988899999999999977654 6789999877999999999999 99999999999974 3466
Q ss_pred HHHHHHHHHhcc-----------ccCCceeEEecCCCCChHHHHHHHHHHHHHHHhCCCCCceEEEEeeCCCchhhhccc
Q 018479 79 LRLLESIFREDE-----------YLVNMQHTVIPSWYQREGYITAMANLIEKELQNFDSPEQVMIFFSAHGVPLAYVEEA 147 (355)
Q Consensus 79 ~~~~~e~~~~~~-----------~~~~~~~~~i~~~~~~p~yi~a~~~~I~~~l~~~~~~~~~~llfsaHgiP~~~v~~~ 147 (355)
.+++.+.+.... .++++++.++++|++||.|+++++++|+++++.-..++++.|||++
T Consensus 81 ~~DIp~~l~~~~~~~dsw~~~~~~~p~~~I~~~~pLG~~P~lie~la~rI~eal~~g~~~~~~avvlvg----------- 149 (474)
T 2jh3_A 81 ETVLPRELGLGHQGPVPTGGVVRVLGGRRVRYTRPLGAHPGMADAIAAQARDTLPEGTDPADVTLLLLA----------- 149 (474)
T ss_dssp HTHHHHHHTCCCCSCCCTTCEEEEETTEEEEECCCGGGSTTHHHHHHHHHHHHSCTTCCGGGCEEEEEE-----------
T ss_pred HHHHHHHHHHhhhccccchhhhhhcCCceEEEeCccCCCHHHHHHHHHHHHHHHhhccCcccceEEEec-----------
Confidence 667877665321 3466789999999999999999999999998651123456788864
Q ss_pred CCc-hHHHHHHHHHHHHHHhcccccCCceeEEEEecccC-----CCCCCCcHHHHHHHHHhcCCceEEEEcceecccchh
Q 018479 148 GDP-YKAEMEECVDLIMEELEKRKITNAYTLAYQSRVGP-----VEWLKPYTDETIIKLGQKGVKSLLAVPISFVSEHIE 221 (355)
Q Consensus 148 GDp-Y~~~~~~ta~~v~e~l~~~~~~~~~~l~fQS~~G~-----~~Wl~P~~~d~l~~L~~~G~k~VvVvP~gFvsD~lE 221 (355)
|| |..++.+++++|+++++.. +|.++|||+ .| .+||+|++++++++| |+|+|+|+|+ |++||+|
T Consensus 150 -dp~a~~~~~~la~~L~e~lg~~----~v~vaf~s~-~Pwl~P~~~wleP~l~d~l~~L---G~krVvV~P~-Fl~dG~h 219 (474)
T 2jh3_A 150 -ARPGNAALETHAQALRERGQFA----GVEVVLESR-EALTPESHAASAVPLSEWPSRV---EAGQAVLVPF-LTHLGKH 219 (474)
T ss_dssp -SSTTCHHHHHHHHHHHHHCCSS----EEEEEECCC-C---------CCEEGGGGGGGC---CSSCEEEEEC-SSCCCHH
T ss_pred -CchHHHHHHHHHHHHHHhcCCC----cEEEEEEeC-CCCCCcccccccCCHHHHHHHc---CCCeEEEEEe-eccCCcc
Confidence 55 4889999999999998753 499999998 54 569999999999998 9999999998 9999999
Q ss_pred hHHHHHHHHHHHHHh--cCCceEEEcCCCCCCHHHHHHHHHHHHHhCCCCCc
Q 018479 222 TLEEIDVEYKELALK--SGIEKWGRVPALGCEATFISDLADAVIESLPYVGA 271 (355)
Q Consensus 222 Tl~eid~e~~e~a~~--~G~~~~~rv~~ln~~p~fi~~La~~V~e~l~~~~~ 271 (355)
+++||+.+.+..... .|. +|.++++||++|.|++++++++.+.+.+...
T Consensus 220 ~~~DI~~~~~~~~~~~p~G~-~v~~~~~LG~~p~~~~ll~~rv~eal~~~~~ 270 (474)
T 2jh3_A 220 AAERLQQALAQAAERFPQAP-PLHVGGPVGEHPAVAEVVLALAAEGREDERG 270 (474)
T ss_dssp HHHHHHHHHHHHHHHCTTCC-CEEECCCGGGSTTHHHHHHHHHHTTCSCSCC
T ss_pred hHHHHHHHHHHHHHhccCCc-EEEecCCCCCCHHHHHHHHHHHHHHHhcCCC
Confidence 999999998766654 355 5899999999999999999999999876544
No 6
>2xwp_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; HET: SIR; 1.90A {Salmonella enterica} PDB: 1qgo_A*
Probab=99.96 E-value=3.3e-27 Score=222.37 Aligned_cols=232 Identities=12% Similarity=0.129 Sum_probs=184.8
Q ss_pred cccCCCchhHHHHHHHHHHHHHHhccCCCceEEEeee-------------cCCCCHHHHHHHHHHcCCCEEEEeecCccc
Q 018479 4 CFVLVLSLAIISCIQAEELRKSLWEKNLPAKVYVGMR-------------YWHPFTEEAIEQIKRDGITKLVVLPLYPQF 70 (355)
Q Consensus 4 ~igggSPL~~~t~~qa~~l~~~L~~~~~~~~V~~amr-------------y~~P~i~~~l~~l~~~G~~~IvvlPlyPqy 70 (355)
-++|||...+..+...+.+.+.++++..+++|++||. ...|++++++++|.++|+++|+|+|||+
T Consensus 7 lv~hGSr~~~~~~~~~~~~~~~v~~~~p~~~V~~af~s~~i~~~l~~~~g~~~psi~~aL~~l~~~G~~~vvV~Pl~l-- 84 (264)
T 2xwp_A 7 VVSFGTSYHDTCEKNIVACERDLAASCPDRDLFRAFTSGMIIRKLRQRDGIDIDTPLQALQKLAAQGYQDVAIQSLHI-- 84 (264)
T ss_dssp EEECCCSCHHHHHHHHHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHCCCCCCHHHHHHHHHHHTCCEEEEEECCS--
T ss_pred EEECCCCCHHHHHHHHHHHHHHHHHHCCCCeEEeehhhHHHHHHHHHhcCCCCCCHHHHHHHHHhCCCCEEEEEeCcc--
Confidence 3689999998777566677777766656789999992 4669999999999999999999999998
Q ss_pred cccchHHHHHHHHHHHHhcc-ccCCceeEEecCCCCChHHHHHHHHHHHHHHHhCCCCCceEEEEeeCCCchhhhcccCC
Q 018479 71 SISTSGSSLRLLESIFREDE-YLVNMQHTVIPSWYQREGYITAMANLIEKELQNFDSPEQVMIFFSAHGVPLAYVEEAGD 149 (355)
Q Consensus 71 S~~ttgs~~~~~~e~~~~~~-~~~~~~~~~i~~~~~~p~yi~a~~~~I~~~l~~~~~~~~~~llfsaHgiP~~~v~~~GD 149 (355)
+.|+..+++.+.+...+ .++ +++++++++.+|.+++++++.|.+.+... +++..|||++||+|.. ++
T Consensus 85 ---~~G~~~~di~~~v~~~~~~~~--~i~~~~pl~~~~~~~~~l~~~l~~~~~~~--~~~~~lvl~gHGs~~~-----~~ 152 (264)
T 2xwp_A 85 ---INGDEYEKIVREVQLLRPLFT--RLTLGVPLLSSHNDYVQLMQALRQQMPSL--RQTEKVVFMGHGASHH-----AF 152 (264)
T ss_dssp ---SSSHHHHHHHHHHHHHGGGCS--EEEEECCSSCSHHHHHHHHHHHHTTSCCC--CTTEEEEEEECCCSSG-----GG
T ss_pred ---cCcHHHHHHHHHHHHHHhhCC--ceEEecCCCCCHHHHHHHHHHHHHhcccc--CCCCeEEEEECCCCch-----hh
Confidence 45666678877765433 335 67899999999999999999998776542 3567899999999743 34
Q ss_pred chHHHHHHHHHHHHHHhcccccCCceeEEEEecccCCCCCCCcHHHHHHHHHhcCCceEEEEcceecc-cchhhHHHHHH
Q 018479 150 PYKAEMEECVDLIMEELEKRKITNAYTLAYQSRVGPVEWLKPYTDETIIKLGQKGVKSLLAVPISFVS-EHIETLEEIDV 228 (355)
Q Consensus 150 pY~~~~~~ta~~v~e~l~~~~~~~~~~l~fQS~~G~~~Wl~P~~~d~l~~L~~~G~k~VvVvP~gFvs-D~lETl~eid~ 228 (355)
++ ..++++.+++. +. ++.++| .+| +|++++++++|.++|+|+|+|+|+.|++ ||+ ..||..
T Consensus 153 ~~---~~~~a~~l~~~-~~-----~v~~g~------~e~-~P~~~~~l~~l~~~G~~~v~v~P~~l~aG~h~--~~Di~~ 214 (264)
T 2xwp_A 153 AA---YACLDHMMTAQ-RF-----PARVGA------VES-YPEVDILIDSLRDEGVTGVHLMPLMLVAGDHA--INDMAS 214 (264)
T ss_dssp HH---HHHHHHHHHHT-TC-----SEEEEE------SSS-SSCHHHHHHHHHHHTCCEEEEEECSSCCCHHH--HHHHHS
T ss_pred HH---HHHHHHHHHhh-CC-----CEEEEE------eCC-CCCHHHHHHHHHHCCCCEEEEEeeecccCcch--hhhccc
Confidence 43 34566666653 21 355555 567 9999999999999999999999999888 998 457765
Q ss_pred H----HHHHHHhcCCceEEEcCCCCCCHHHHHHHHHHHHHhCC
Q 018479 229 E----YKELALKSGIEKWGRVPALGCEATFISDLADAVIESLP 267 (355)
Q Consensus 229 e----~~e~a~~~G~~~~~rv~~ln~~p~fi~~La~~V~e~l~ 267 (355)
+ .++.+.+.|.....++++||+||.+++.+.+++.+.+.
T Consensus 215 ~~~d~~~~~~~~~g~~~~~~~~~LG~~p~i~~~~~~r~~ea~~ 257 (264)
T 2xwp_A 215 DDGDSWKMRFNAAGIPATPWLSGLGENPAIRAMFVAHLHQALN 257 (264)
T ss_dssp SSTTSHHHHHHHTTCCEEECCCCGGGCHHHHHHHHHHHHHHHC
T ss_pred cchhHHHHHHHHcCCeEEEeccCCCCCHHHHHHHHHHHHHHHh
Confidence 5 67777788887656789999999999999999999875
No 7
>3lyh_A Cobalamin (vitamin B12) biosynthesis CBIX protein; structural genomics, joint center for structural genomics, protein structure initiative; HET: MSE; 1.60A {Marinobacter aquaeolei}
Probab=99.39 E-value=2e-12 Score=107.86 Aligned_cols=112 Identities=14% Similarity=0.148 Sum_probs=90.6
Q ss_pred cccCCCchhHHHHHHHHHHHHHHhccCCCceEEEe-eecCCCCHHHHHHHHHHcCCCEEEEeecCccccccchHHHHHHH
Q 018479 4 CFVLVLSLAIISCIQAEELRKSLWEKNLPAKVYVG-MRYWHPFTEEAIEQIKRDGITKLVVLPLYPQFSISTSGSSLRLL 82 (355)
Q Consensus 4 ~igggSPL~~~t~~qa~~l~~~L~~~~~~~~V~~a-mry~~P~i~~~l~~l~~~G~~~IvvlPlyPqyS~~ttgs~~~~~ 82 (355)
-+||||+....++ ..+.+.+.++++. ..|+.| ++++.|++++++++|+++|+++|+++|+|+. ...|+.+++
T Consensus 10 lv~HGS~~~~~~~-~~~~l~~~l~~~~--~~V~~a~le~~~P~l~~~l~~l~~~G~~~vvvvPlfl~----~G~H~~~Di 82 (126)
T 3lyh_A 10 LLAHGSSDARWCE-TFEKLAEPTVESI--ENAAIAYMELAEPSLDTIVNRAKGQGVEQFTVVPLFLA----AGRHLRKDV 82 (126)
T ss_dssp EEECCCSCHHHHH-HHHHHHHHHHHHS--TTCEEEESSSSSSBHHHHHHHHHHTTCCEEEEEECCSC----CCHHHHHHH
T ss_pred EEeCCCCCHHHHH-HHHHHHHHHHhhc--CCEEEEEEeCCCCCHHHHHHHHHHcCCCEEEEEecccC----CCchhhhHH
Confidence 3689999766554 5667777776655 367888 6899999999999999999999999999986 446777888
Q ss_pred HHHHHhcc-ccCCceeEEecCCCCChHHHHHHHHHHHHHHHh
Q 018479 83 ESIFREDE-YLVNMQHTVIPSWYQREGYITAMANLIEKELQN 123 (355)
Q Consensus 83 ~e~~~~~~-~~~~~~~~~i~~~~~~p~yi~a~~~~I~~~l~~ 123 (355)
++.+...+ .+ ++++.+.++++.||.+++++++++++++.+
T Consensus 83 p~~~~~~~~~~-~~~i~~~~~LG~~p~l~~~l~~ri~~al~~ 123 (126)
T 3lyh_A 83 PAMIERLEAEH-GVTIRLAEPIGKNPRLGLAIRDVVKEELER 123 (126)
T ss_dssp HHHHHHHHHHH-TCEEEECCCGGGSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHh-CceEEEcCCCCCChHHHHHHHHHHHHHHhc
Confidence 77664322 23 668889999999999999999999999864
No 8
>2xws_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; 1.60A {Archaeoglobus fulgidus} PDB: 2dj5_A* 2xwq_A
Probab=99.34 E-value=3.3e-12 Score=107.13 Aligned_cols=112 Identities=14% Similarity=0.039 Sum_probs=88.7
Q ss_pred cccCCCchhHHHHHHHHHHHHHHhccCCCceEEEe-eec-CCCCHHHHHHHHHHcCCCEEEEeecCccccccchHHHHHH
Q 018479 4 CFVLVLSLAIISCIQAEELRKSLWEKNLPAKVYVG-MRY-WHPFTEEAIEQIKRDGITKLVVLPLYPQFSISTSGSSLRL 81 (355)
Q Consensus 4 ~igggSPL~~~t~~qa~~l~~~L~~~~~~~~V~~a-mry-~~P~i~~~l~~l~~~G~~~IvvlPlyPqyS~~ttgs~~~~ 81 (355)
-+||||+....++ ..+.+++.++++.....|++| |+| ..|++++++++| |+++|+++|+|++ ...++.++
T Consensus 8 lv~HGS~~~~~~~-~~~~la~~l~~~~~~~~V~~a~le~~~~Psl~~~l~~l---g~~~v~v~Plfl~----~G~h~~~d 79 (133)
T 2xws_A 8 IVGHGSQLNHYRE-VMELHRKRIEESGAFDEVKIAFAARKRRPMPDEAIREM---NCDIIYVVPLFIS----YGLHVTED 79 (133)
T ss_dssp EEECSCCCHHHHH-HHHHHHHHHHHHTSSSEEEEEESSTTCSSCHHHHHHHC---CCSEEEEEECCSS----CCHHHHTH
T ss_pred EEECCCCCHHHHH-HHHHHHHHHHhhCCCCcEEeeeeecCCCCCHHHHHHHc---CCCEEEEEeeeeC----CCcchHhH
Confidence 3689999766554 566777777766556789998 688 999999999999 9999999999986 44566678
Q ss_pred HHHHHHhcc-------ccCCceeEEecCCCCChHHHHHHHHHHHHHHHh
Q 018479 82 LESIFREDE-------YLVNMQHTVIPSWYQREGYITAMANLIEKELQN 123 (355)
Q Consensus 82 ~~e~~~~~~-------~~~~~~~~~i~~~~~~p~yi~a~~~~I~~~l~~ 123 (355)
+.+.+.... .++.+++.+.++++.+|.++++++++|+++++.
T Consensus 80 i~~~~~~~~~~~s~~~~~~~~~i~~~~pLg~~p~~~~~l~~ri~~a~~~ 128 (133)
T 2xws_A 80 LPDLLGFPRGRGIKEGEFEGKKVVICEPIGEDYFVTYAILNSVFRIGRD 128 (133)
T ss_dssp HHHHHTCCCSSSCEEEEETTEEEEECCCSTTSHHHHHHHHHHHHCCC--
T ss_pred HHHHHHHhhccccccccCCCceEEEcCCCCCCHHHHHHHHHHHHHhhcC
Confidence 877764322 356778899999999999999999999887653
No 9
>1tjn_A Sirohydrochlorin cobaltochelatase; AF0721, APC5049, midwest consortium for structural genomics, structure initiative, A. fulgidus; 2.01A {Archaeoglobus fulgidus} SCOP: c.92.1.3
Probab=99.33 E-value=2.9e-12 Score=111.23 Aligned_cols=113 Identities=14% Similarity=0.023 Sum_probs=87.2
Q ss_pred cccCCCchhHHHHHHHHHHHHHHhccCCCceEEEe-eec-CCCCHHHHHHHHHHcCCCEEEEeecCccccccchHHHHHH
Q 018479 4 CFVLVLSLAIISCIQAEELRKSLWEKNLPAKVYVG-MRY-WHPFTEEAIEQIKRDGITKLVVLPLYPQFSISTSGSSLRL 81 (355)
Q Consensus 4 ~igggSPL~~~t~~qa~~l~~~L~~~~~~~~V~~a-mry-~~P~i~~~l~~l~~~G~~~IvvlPlyPqyS~~ttgs~~~~ 81 (355)
-+||||+....++ ..+.+++.|+++.....|++| |+| ..|+|++++++| |+++|+|+|+|++ ...++.++
T Consensus 29 Lv~HGS~~p~~~~-~~~~la~~l~~~~~~~~V~~afle~~~~Psl~~~l~~l---G~~~VvVvPlfL~----~G~h~~~D 100 (156)
T 1tjn_A 29 IVGHGSQLNHYRE-VMELHRKRIEESGAFDEVKIAFAARKRRPMPDEAIREM---NCDIIYVVPLFIS----YGLHVTED 100 (156)
T ss_dssp EEECCTTSTTHHH-HHHHHHHHHHHHTSSSEEEEEECSSSCSSCHHHHHHHC---CCSEEEEEECCSS----CSHHHHTH
T ss_pred EEECCCCCHHHHH-HHHHHHHHHHhhCCCCeEEEEEecCCCCCCHHHHHHHc---CCCEEEEEechhc----CCchhHhH
Confidence 3689998755443 355566666555445689888 799 999999999999 9999999999997 44566778
Q ss_pred HHHHHHhcc-------ccCCceeEEecCCCCChHHHHHHHHHHHHHHHhC
Q 018479 82 LESIFREDE-------YLVNMQHTVIPSWYQREGYITAMANLIEKELQNF 124 (355)
Q Consensus 82 ~~e~~~~~~-------~~~~~~~~~i~~~~~~p~yi~a~~~~I~~~l~~~ 124 (355)
+.+.+.+.. .++.+++.+.++++.+|.++++++++|+++++..
T Consensus 101 Ip~~l~~~~~~~sw~~~~~~~~i~~~~pLG~~p~l~~~l~~ri~ea~~~~ 150 (156)
T 1tjn_A 101 LPDLLGFPRGRGIKEGEFEGKKVVICEPIGEDYFVTYAILNSVFRIGRDG 150 (156)
T ss_dssp HHHHHTCCCSSSCEEEEETTEEEEECCCSTTCHHHHHHHHHHHHCCC---
T ss_pred HHHHHHHHHhcccccccCCCceEEEeCCCCCCHHHHHHHHHHHHHHHhcc
Confidence 877765332 3577889999999999999999999999887543
No 10
>3lyh_A Cobalamin (vitamin B12) biosynthesis CBIX protein; structural genomics, joint center for structural genomics, protein structure initiative; HET: MSE; 1.60A {Marinobacter aquaeolei}
Probab=99.23 E-value=2e-10 Score=95.70 Aligned_cols=117 Identities=20% Similarity=0.332 Sum_probs=94.7
Q ss_pred ceEEEEeeCCCchhhhcccCCc-hHHHHHHHHHHHHHHhcccccCCceeEEEEecccCCCCCCCcHHHHHHHHHhcCCce
Q 018479 129 QVMIFFSAHGVPLAYVEEAGDP-YKAEMEECVDLIMEELEKRKITNAYTLAYQSRVGPVEWLKPYTDETIIKLGQKGVKS 207 (355)
Q Consensus 129 ~~~llfsaHgiP~~~v~~~GDp-Y~~~~~~ta~~v~e~l~~~~~~~~~~l~fQS~~G~~~Wl~P~~~d~l~~L~~~G~k~ 207 (355)
+..||+.+||++ || ....+.+.++.++++. . ++.++|.. +-.|++++++++|.++|+++
T Consensus 5 ~~alllv~HGS~--------~~~~~~~~~~l~~~l~~~~--~----~V~~a~le------~~~P~l~~~l~~l~~~G~~~ 64 (126)
T 3lyh_A 5 PHQIILLAHGSS--------DARWCETFEKLAEPTVESI--E----NAAIAYME------LAEPSLDTIVNRAKGQGVEQ 64 (126)
T ss_dssp CEEEEEEECCCS--------CHHHHHHHHHHHHHHHHHS--T----TCEEEESS------SSSSBHHHHHHHHHHTTCCE
T ss_pred CcEEEEEeCCCC--------CHHHHHHHHHHHHHHHhhc--C----CEEEEEEe------CCCCCHHHHHHHHHHcCCCE
Confidence 458999999993 34 3556778888888775 2 48899864 34799999999999999999
Q ss_pred EEEEcceecccchhhHHHHHHHHHHHHHhcCCceEEEcCCCCCCHHHHHHHHHHHHHhCC
Q 018479 208 LLAVPISFVSEHIETLEEIDVEYKELALKSGIEKWGRVPALGCEATFISDLADAVIESLP 267 (355)
Q Consensus 208 VvVvP~gFvsD~lETl~eid~e~~e~a~~~G~~~~~rv~~ln~~p~fi~~La~~V~e~l~ 267 (355)
|+|+|+ |+....++..||..+..+...+.|. ++.+.+.|+.+|.+++.+++++.+.+.
T Consensus 65 vvvvPl-fl~~G~H~~~Dip~~~~~~~~~~~~-~i~~~~~LG~~p~l~~~l~~ri~~al~ 122 (126)
T 3lyh_A 65 FTVVPL-FLAAGRHLRKDVPAMIERLEAEHGV-TIRLAEPIGKNPRLGLAIRDVVKEELE 122 (126)
T ss_dssp EEEEEC-CSCCCHHHHHHHHHHHHHHHHHHTC-EEEECCCGGGSHHHHHHHHHHHHHHHH
T ss_pred EEEEec-ccCCCchhhhHHHHHHHHHHHHhCc-eEEEcCCCCCChHHHHHHHHHHHHHHh
Confidence 999997 6666677778888888776555555 588999999999999999999998764
No 11
>2xws_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; 1.60A {Archaeoglobus fulgidus} PDB: 2dj5_A* 2xwq_A
Probab=99.10 E-value=3.6e-10 Score=94.57 Aligned_cols=118 Identities=17% Similarity=0.121 Sum_probs=90.4
Q ss_pred eEEEEeeCCCchhhhcccCCch-HHHHHHHHHHHHHHhcccccCCceeEEEEecccCCCCCCCcHHHHHHHHHhcCCceE
Q 018479 130 VMIFFSAHGVPLAYVEEAGDPY-KAEMEECVDLIMEELEKRKITNAYTLAYQSRVGPVEWLKPYTDETIIKLGQKGVKSL 208 (355)
Q Consensus 130 ~~llfsaHgiP~~~v~~~GDpY-~~~~~~ta~~v~e~l~~~~~~~~~~l~fQS~~G~~~Wl~P~~~d~l~~L~~~G~k~V 208 (355)
..||+.+||.. +|. ...+.+.++.++++++.. ++.++|.+. |-.|+++++|++| |+++|
T Consensus 4 ~alllv~HGS~--------~~~~~~~~~~la~~l~~~~~~~----~V~~a~le~-----~~~Psl~~~l~~l---g~~~v 63 (133)
T 2xws_A 4 RGLVIVGHGSQ--------LNHYREVMELHRKRIEESGAFD----EVKIAFAAR-----KRRPMPDEAIREM---NCDII 63 (133)
T ss_dssp EEEEEEECSCC--------CHHHHHHHHHHHHHHHHHTSSS----EEEEEESST-----TCSSCHHHHHHHC---CCSEE
T ss_pred ceEEEEECCCC--------CHHHHHHHHHHHHHHHhhCCCC----cEEeeeeec-----CCCCCHHHHHHHc---CCCEE
Confidence 47999999993 343 557788888888876432 488999763 2379999999999 99999
Q ss_pred EEEcceecccchhhHHHHHHHHHHHHH------hcCCceEEEcCCCCCCHHHHHHHHHHHHHhCCC
Q 018479 209 LAVPISFVSEHIETLEEIDVEYKELAL------KSGIEKWGRVPALGCEATFISDLADAVIESLPY 268 (355)
Q Consensus 209 vVvP~gFvsD~lETl~eid~e~~e~a~------~~G~~~~~rv~~ln~~p~fi~~La~~V~e~l~~ 268 (355)
+|+|+ |+....++..||..+..+... ......+.+.+.|+++|.+++.+++++.+.+..
T Consensus 64 ~v~Pl-fl~~G~h~~~di~~~~~~~~~~~s~~~~~~~~~i~~~~pLg~~p~~~~~l~~ri~~a~~~ 128 (133)
T 2xws_A 64 YVVPL-FISYGLHVTEDLPDLLGFPRGRGIKEGEFEGKKVVICEPIGEDYFVTYAILNSVFRIGRD 128 (133)
T ss_dssp EEEEC-CSSCCHHHHTHHHHHHTCCCSSSCEEEEETTEEEEECCCSTTSHHHHHHHHHHHHCCC--
T ss_pred EEEee-eeCCCcchHhHHHHHHHHhhccccccccCCCceEEEcCCCCCCHHHHHHHHHHHHHhhcC
Confidence 99997 777777777787776654322 233346889999999999999999999987653
No 12
>1tjn_A Sirohydrochlorin cobaltochelatase; AF0721, APC5049, midwest consortium for structural genomics, structure initiative, A. fulgidus; 2.01A {Archaeoglobus fulgidus} SCOP: c.92.1.3
Probab=98.94 E-value=4.1e-09 Score=91.22 Aligned_cols=118 Identities=17% Similarity=0.130 Sum_probs=87.4
Q ss_pred eEEEEeeCCCchhhhcccCCc-hHHHHHHHHHHHHHHhcccccCCceeEEEEecccCCCCCCCcHHHHHHHHHhcCCceE
Q 018479 130 VMIFFSAHGVPLAYVEEAGDP-YKAEMEECVDLIMEELEKRKITNAYTLAYQSRVGPVEWLKPYTDETIIKLGQKGVKSL 208 (355)
Q Consensus 130 ~~llfsaHgiP~~~v~~~GDp-Y~~~~~~ta~~v~e~l~~~~~~~~~~l~fQS~~G~~~Wl~P~~~d~l~~L~~~G~k~V 208 (355)
..||+.+||.+ || ....+.+.++.|+++++.. ++.++|.+-.+ +|+++++|++| |+++|
T Consensus 25 ~avlLv~HGS~--------~p~~~~~~~~la~~l~~~~~~~----~V~~afle~~~-----~Psl~~~l~~l---G~~~V 84 (156)
T 1tjn_A 25 RGLVIVGHGSQ--------LNHYREVMELHRKRIEESGAFD----EVKIAFAARKR-----RPMPDEAIREM---NCDII 84 (156)
T ss_dssp EEEEEEECCTT--------STTHHHHHHHHHHHHHHHTSSS----EEEEEECSSSC-----SSCHHHHHHHC---CCSEE
T ss_pred cCEEEEECCCC--------CHHHHHHHHHHHHHHHhhCCCC----eEEEEEecCCC-----CCCHHHHHHHc---CCCEE
Confidence 58999999993 34 3667888899998886432 48899976212 79999999999 99999
Q ss_pred EEEcceecccchhhHHHHHHHHHHHHH------hcCCceEEEcCCCCCCHHHHHHHHHHHHHhCCC
Q 018479 209 LAVPISFVSEHIETLEEIDVEYKELAL------KSGIEKWGRVPALGCEATFISDLADAVIESLPY 268 (355)
Q Consensus 209 vVvP~gFvsD~lETl~eid~e~~e~a~------~~G~~~~~rv~~ln~~p~fi~~La~~V~e~l~~ 268 (355)
+|+|+- +.....+-.||..+..+..+ ......+.+.+.|+++|.+++++++++.+.+..
T Consensus 85 vVvPlf-L~~G~h~~~DIp~~l~~~~~~~sw~~~~~~~~i~~~~pLG~~p~l~~~l~~ri~ea~~~ 149 (156)
T 1tjn_A 85 YVVPLF-ISYGLHVTEDLPDLLGFPRGRGIKEGEFEGKKVVICEPIGEDYFVTYAILNSVFRIGRD 149 (156)
T ss_dssp EEEECC-SSCSHHHHTHHHHHHTCCCSSSCEEEEETTEEEEECCCSTTCHHHHHHHHHHHHCCC--
T ss_pred EEEech-hcCCchhHhHHHHHHHHHHhcccccccCCCceEEEeCCCCCCHHHHHHHHHHHHHHHhc
Confidence 999964 33344455677666554322 233346889999999999999999999987654
No 13
>2xvy_A Chelatase, putative; metal binding protein; HET: HEM; 1.70A {Desulfovibrio vulgaris} PDB: 2xvx_A* 2xvz_A*
Probab=98.73 E-value=1.8e-07 Score=87.25 Aligned_cols=126 Identities=13% Similarity=0.156 Sum_probs=92.4
Q ss_pred ceEEEEeeCCCchhhhcccCCch-HHHHHHHHHHHHHHhcccccCCceeEEEEeccc-----CCCCCCCcHHHHHHHHHh
Q 018479 129 QVMIFFSAHGVPLAYVEEAGDPY-KAEMEECVDLIMEELEKRKITNAYTLAYQSRVG-----PVEWLKPYTDETIIKLGQ 202 (355)
Q Consensus 129 ~~~llfsaHgiP~~~v~~~GDpY-~~~~~~ta~~v~e~l~~~~~~~~~~l~fQS~~G-----~~~Wl~P~~~d~l~~L~~ 202 (355)
+..+|+.+||+ .||. ...+.++++.|+++++. .++..+|-|+.- ...|-.|++.++|++|.+
T Consensus 9 ~~aillv~hGS--------~~~~~~~~~~~~~~~l~~~~~~----~~V~~af~~~~i~~~l~~~~~~~P~i~~al~~l~~ 76 (269)
T 2xvy_A 9 KTGILLVAFGT--------SVEEARPALDKMGDRVRAAHPD----IPVRWAYTAKMIRAKLRAEGIAAPSPAEALAGMAE 76 (269)
T ss_dssp CEEEEEEECCC--------CCTTTTHHHHHHHHHHHHHCTT----SCEEEEESCHHHHHHHHHTTCCCCCHHHHHHHHHH
T ss_pred CceEEEEeCCC--------CcHHHHHHHHHHHHHHHHHCCC----CeEEeehhhHHHHHHHHHcCCCCCCHHHHHHHHHH
Confidence 46899999999 1343 55788888889888742 258899987310 012558999999999999
Q ss_pred cCCceEEEEcceecccchhhHHHHHHHHHHHHH-hcCCceEEEcCCCCCCHHHHHHHHHHHHHhCCC
Q 018479 203 KGVKSLLAVPISFVSEHIETLEEIDVEYKELAL-KSGIEKWGRVPALGCEATFISDLADAVIESLPY 268 (355)
Q Consensus 203 ~G~k~VvVvP~gFvsD~lETl~eid~e~~e~a~-~~G~~~~~rv~~ln~~p~fi~~La~~V~e~l~~ 268 (355)
+|+++|+|+|...++.+ ...||.....++.. ......++.++++++||.+++++++++.+.+..
T Consensus 77 ~G~~~ivV~Pl~l~~G~--~~~di~~~~~~l~~~~~~~~~i~~~~pl~~~p~~i~~la~~i~~~~~~ 141 (269)
T 2xvy_A 77 EGFTHVAVQSLHTIPGE--EFHGLLETAHAFQGLPKGLTRVSVGLPLIGTTADAEAVAEALVASLPA 141 (269)
T ss_dssp TTCCEEEEEECCSSSSH--HHHHHHHHHHHHTTCTTSCSEEEEECCSSCSHHHHHHHHHHHHHHSCT
T ss_pred CCCCEEEEEeceeeccH--hHHHHHHHHHHHHHhhccCCeEEEeCCCCCCHHHHHHHHHHHHHhchh
Confidence 99999999998765544 34455554322321 122357899999999999999999999998754
No 14
>2xwp_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; HET: SIR; 1.90A {Salmonella enterica} PDB: 1qgo_A*
Probab=98.71 E-value=3.9e-08 Score=91.93 Aligned_cols=109 Identities=11% Similarity=0.054 Sum_probs=81.6
Q ss_pred ccCCCchhHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCHHHHHHHHHHcCCCEEEEeecCccccccchHHHHHHHHH
Q 018479 5 FVLVLSLAIISCIQAEELRKSLWEKNLPAKVYVGMRYWHPFTEEAIEQIKRDGITKLVVLPLYPQFSISTSGSSLRLLES 84 (355)
Q Consensus 5 igggSPL~~~t~~qa~~l~~~L~~~~~~~~V~~amry~~P~i~~~l~~l~~~G~~~IvvlPlyPqyS~~ttgs~~~~~~e 84 (355)
+|||||.. .+ .....++..|.+.+ . .|++|+--|.|++++++++|.+.|+++|+++|++.. +..+..+++..
T Consensus 143 ~gHGs~~~-~~-~~~~~~a~~l~~~~-~-~v~~g~~e~~P~~~~~l~~l~~~G~~~v~v~P~~l~----aG~h~~~Di~~ 214 (264)
T 2xwp_A 143 MGHGASHH-AF-AAYACLDHMMTAQR-F-PARVGAVESYPEVDILIDSLRDEGVTGVHLMPLMLV----AGDHAINDMAS 214 (264)
T ss_dssp EECCCSSG-GG-HHHHHHHHHHHHTT-C-SEEEEESSSSSCHHHHHHHHHHHTCCEEEEEECSSC----CCHHHHHHHHS
T ss_pred EECCCCch-hh-HHHHHHHHHHHhhC-C-CEEEEEeCCCCCHHHHHHHHHHCCCCEEEEEeeecc----cCcchhhhccc
Confidence 68999987 33 34567777777665 3 789997657999999999999999999999999863 55677777653
Q ss_pred H-----HHhccccCCcee-EEecCCCCChHHHHHHHHHHHHHHH
Q 018479 85 I-----FREDEYLVNMQH-TVIPSWYQREGYITAMANLIEKELQ 122 (355)
Q Consensus 85 ~-----~~~~~~~~~~~~-~~i~~~~~~p~yi~a~~~~I~~~l~ 122 (355)
. ...... .+.++ .++++.+.||.+++++.+++++++.
T Consensus 215 ~~~d~~~~~~~~-~g~~~~~~~~~LG~~p~i~~~~~~r~~ea~~ 257 (264)
T 2xwp_A 215 DDGDSWKMRFNA-AGIPATPWLSGLGENPAIRAMFVAHLHQALN 257 (264)
T ss_dssp SSTTSHHHHHHH-TTCCEEECCCCGGGCHHHHHHHHHHHHHHHC
T ss_pred cchhHHHHHHHH-cCCeEEEeccCCCCCHHHHHHHHHHHHHHHh
Confidence 2 111111 12233 3579999999999999999999875
No 15
>2h1v_A Ferrochelatase; rossman fold, PI-helix, lyase; 1.20A {Bacillus subtilis} PDB: 2hk6_A 1c1h_A* 1ld3_A 1n0i_A 1ak1_A 3goq_A 1doz_A 2q2n_A* 3m4z_A 2h1w_A 2ac2_A 2q3j_A* 2ac4_A 2q2o_A* 1c9e_A* 2c8j_A
Probab=98.35 E-value=3e-06 Score=81.10 Aligned_cols=101 Identities=16% Similarity=0.225 Sum_probs=68.5
Q ss_pred HHHHHHHHHHhcccc--cCCceeEEEEecccCCCCCCCcHHHHHHHHHhcCCceEEEEcce-----ecccchhhHHHHHH
Q 018479 156 EECVDLIMEELEKRK--ITNAYTLAYQSRVGPVEWLKPYTDETIIKLGQKGVKSLLAVPIS-----FVSEHIETLEEIDV 228 (355)
Q Consensus 156 ~~ta~~v~e~l~~~~--~~~~~~l~fQS~~G~~~Wl~P~~~d~l~~L~~~G~k~VvVvP~g-----FvsD~lETl~eid~ 228 (355)
++.+++|++.|...+ ...++.+++ +.+ .|+++|+|++|.++|+++|+|+|.. +++.+. ..++..
T Consensus 61 ~~q~~~L~~~L~~~~~~~~~~V~~am--ry~-----~P~i~~~l~~l~~~G~~~ivvlPl~pq~s~st~g~~--~~~i~~ 131 (310)
T 2h1v_A 61 EQQAHNLEQHLNEIQDEITFKAYIGL--AHI-----EPFIEDAVAEMHKDGITEAVSIVLAPHFSTFSVQSY--NKRAKE 131 (310)
T ss_dssp HHHHHHHHHHHHHHCSSEEEEEEEEE--SSS-----SSBHHHHHHHHHHTTCCEEEEEESSSSCCTTTHHHH--HHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCceEeehh--cCC-----CCCHHHHHHHHHhcCCCEEEEEECccchhhhhHHHH--HHHHHH
Confidence 444555555553211 011355554 332 7999999999999999999999964 333332 344443
Q ss_pred HHHHHHHhcCCceEEEcCCCCCCHHHHHHHHHHHHHhCCCC
Q 018479 229 EYKELALKSGIEKWGRVPALGCEATFISDLADAVIESLPYV 269 (355)
Q Consensus 229 e~~e~a~~~G~~~~~rv~~ln~~p~fi~~La~~V~e~l~~~ 269 (355)
... +.+...++.++.+.+||.||+++++.|.+.+...
T Consensus 132 ~l~----~~~~~~i~~i~~~~~~p~~i~a~a~~i~~~l~~~ 168 (310)
T 2h1v_A 132 EAE----KLGGLTITSVESWYDEPKFVTYWVDRVKETYASM 168 (310)
T ss_dssp HHH----HHCSCEEEECCCCTTCHHHHHHHHHHHHHHHHHS
T ss_pred HHH----hCCCCeEEEeCCCCCCHHHHHHHHHHHHHHHHhc
Confidence 333 2334579999999999999999999999887543
No 16
>1lbq_A Ferrochelatase; rossmann fold, PI-helix, lyase; 2.40A {Saccharomyces cerevisiae} SCOP: c.92.1.1 PDB: 1l8x_A
Probab=98.28 E-value=7.1e-06 Score=80.16 Aligned_cols=113 Identities=19% Similarity=0.256 Sum_probs=73.3
Q ss_pred CchHHHHHHHHHHHHHHhcccc---cCCceeEEEEecccCCCCCCCcHHHHHHHHHhcCCceEEEEcc--eecccchh-h
Q 018479 149 DPYKAEMEECVDLIMEELEKRK---ITNAYTLAYQSRVGPVEWLKPYTDETIIKLGQKGVKSLLAVPI--SFVSEHIE-T 222 (355)
Q Consensus 149 DpY~~~~~~ta~~v~e~l~~~~---~~~~~~l~fQS~~G~~~Wl~P~~~d~l~~L~~~G~k~VvVvP~--gFvsD~lE-T 222 (355)
.|-....++.+++|++.|+... ...++.+++ +.+ .|+++|+|++|.++|+++|+|+|. .|.+-... .
T Consensus 71 SPL~~~t~~q~~~L~~~L~~~~~~~~~~~V~~am--ry~-----~P~i~d~l~~l~~~G~~~ivvlPlyPqyS~~ttgs~ 143 (362)
T 1lbq_A 71 SPIRKWSEYQATEVCKILDKTCPETAPHKPYVAF--RYA-----KPLTAETYKQMLKDGVKKAVAFSQYPHFSYSTTGSS 143 (362)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHCGGGCCEEEEEEE--SSS-----SSCHHHHHHHHHTTTCCEEEEEESCSSCCTTTHHHH
T ss_pred CccHHHHHHHHHHHHHHHHhhcccCCCceEEeec--ccC-----CCCHHHHHHHHHHcCCCeEEEEecchhccccchhHH
Confidence 3333334555666666653210 111344553 332 799999999999999999999995 34332222 2
Q ss_pred HHHHHHHHHHHHHhcCCceEEEcCCCCCCHHHHHHHHHHHHHhCCCC
Q 018479 223 LEEIDVEYKELALKSGIEKWGRVPALGCEATFISDLADAVIESLPYV 269 (355)
Q Consensus 223 l~eid~e~~e~a~~~G~~~~~rv~~ln~~p~fi~~La~~V~e~l~~~ 269 (355)
..++...+++.. ..+..++..++.+.+||.||+++++.|++.+...
T Consensus 144 ~~~i~~~l~~~~-~~~~i~i~~i~~~~~~p~~I~ala~~I~~~l~~~ 189 (362)
T 1lbq_A 144 INELWRQIKALD-SERSISWSVIDRWPTNEGLIKAFSENITKKLQEF 189 (362)
T ss_dssp HHHHHHHHHHHC-TTCCSEEEEECCCTTCHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHhcc-cCCCceEEEecCCCCCHHHHHHHHHHHHHHHHhc
Confidence 445554444442 2233358899999999999999999999887654
No 17
>2jh3_A Ribosomal protein S2-related protein; CBIX, SAD phasing, structural genomics, chelatase super-family fold, 4Fe-4S iron-sulphur cluster; 1.9A {Deinococcus radiodurans}
Probab=98.25 E-value=7.7e-07 Score=89.84 Aligned_cols=122 Identities=13% Similarity=0.096 Sum_probs=85.8
Q ss_pred eEEEEeeCCCchhhhcccCCchHHHHHHHHHHHHHHhccccc-CCceeEEEEecccCCCCCCCcHHHHHHHHHhcCCceE
Q 018479 130 VMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRKI-TNAYTLAYQSRVGPVEWLKPYTDETIIKLGQKGVKSL 208 (355)
Q Consensus 130 ~~llfsaHgiP~~~v~~~GDpY~~~~~~ta~~v~e~l~~~~~-~~~~~l~fQS~~G~~~Wl~P~~~d~l~~L~~~G~k~V 208 (355)
..||+.+||+|.... -+.++.+.++.+++..+...+ ..++.++|.+ -.|+++++|++| |+++|
T Consensus 4 ~alLLVgHGSp~~~~------a~~~i~~La~~l~~~~~~~~L~~~~V~~Afle-------~~PsI~eaL~~L---G~~rV 67 (474)
T 2jh3_A 4 RSLVLIGHGSHHHGE------SARATQQVAEALRGRGLAGHLPYDEVLEGYWQ-------QEPGLRQVLRTV---AYSDV 67 (474)
T ss_dssp CEEEEEECCCSSCTH------HHHHHHHHHHHHHHHHHTTCCSCSEEEEEESS-------SSSBTTTGGGGC---CBSEE
T ss_pred ceEEEEeCCCCCChh------HHHHHHHHHHHHHHhCCccccCCCeEEEEEcC-------CCCCHHHHHHHc---CcCeE
Confidence 479999999974321 255677777777776431000 1247788875 279999999998 99999
Q ss_pred EEEcceecccchhhHHHHHHHHHHHHH----------hcCCceEEEcCCCCCCHHHHHHHHHHHHHhCCC
Q 018479 209 LAVPISFVSEHIETLEEIDVEYKELAL----------KSGIEKWGRVPALGCEATFISDLADAVIESLPY 268 (355)
Q Consensus 209 vVvP~gFvsD~lETl~eid~e~~e~a~----------~~G~~~~~rv~~ln~~p~fi~~La~~V~e~l~~ 268 (355)
+|+|.. ++...++-.||..++.+... ..+...+.+++.+++||.+++++++++.+.+..
T Consensus 68 vVvPLf-l~~G~H~~~DIp~~l~~~~~~~dsw~~~~~~~p~~~I~~~~pLG~~P~lie~la~rI~eal~~ 136 (474)
T 2jh3_A 68 TVVPVF-LSEGYVTETVLPRELGLGHQGPVPTGGVVRVLGGRRVRYTRPLGAHPGMADAIAAQARDTLPE 136 (474)
T ss_dssp EEEECC-SCCSHHHHTHHHHHHTCCCCSCCCTTCEEEEETTEEEEECCCGGGSTTHHHHHHHHHHHHSCT
T ss_pred EEEEEe-hhccHhHHHHHHHHHHHhhhccccchhhhhhcCCceEEEeCccCCCHHHHHHHHHHHHHHHhh
Confidence 999953 34444555566655443211 234446899999999999999999999998865
No 18
>3hcn_A Ferrochelatase, mitochondrial; metal selectivity, disease mutation, heme biosynthesis, iron, iron-sulfur, lyase, membrane, metal-BIN mitochondrion; HET: CHD HEM GOL; 1.60A {Homo sapiens} SCOP: c.92.1.1 PDB: 2qd3_A* 2qd5_A* 2qd4_A* 3hco_A* 3hcr_A* 2qd1_A* 2hre_A* 3hcp_A* 2qd2_A* 2hrc_A* 1hrk_A* 4f4d_A* 3aqi_A* 2pnj_A* 2po5_A* 2po7_A*
Probab=98.22 E-value=1.4e-05 Score=78.06 Aligned_cols=116 Identities=17% Similarity=0.306 Sum_probs=78.4
Q ss_pred cCCchHHHHHHHHHHHHHHhcccc---cCCceeEEEEecccCCCCCCCcHHHHHHHHHhcCCceEEEEcc--eecccchh
Q 018479 147 AGDPYKAEMEECVDLIMEELEKRK---ITNAYTLAYQSRVGPVEWLKPYTDETIIKLGQKGVKSLLAVPI--SFVSEHIE 221 (355)
Q Consensus 147 ~GDpY~~~~~~ta~~v~e~l~~~~---~~~~~~l~fQS~~G~~~Wl~P~~~d~l~~L~~~G~k~VvVvP~--gFvsD~lE 221 (355)
.|.|-....++.+++|++.|+... ...++.+++ |.+ .|+++|+|++|.++|+++|+++|. .|.+-+..
T Consensus 64 ggSPL~~~t~~Q~~~L~~~L~~~~~~~~~~~V~~am--ry~-----~P~i~~~l~~l~~~G~~~ivvlPlyPqyS~~Ttg 136 (359)
T 3hcn_A 64 GGSPIKIWTSKQGEGMVKLLDELSPNTAPHKYYIGF--RYV-----HPLTEEAIEEMERDGLERAIAFTQYPQYSCSTTG 136 (359)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHHHCGGGCSEEEEEEE--SSS-----SSBHHHHHHHHHHTTCSEEEEEESCSSCCTTTHH
T ss_pred CCCcHHHHHHHHHHHHHHHHhhhcccccCceEEEEE--eeC-----CCCHHHHHHHHHhcCCCeEEEEECCccccccchh
Confidence 356666666667777777764311 111244444 333 799999999999999999999993 56655555
Q ss_pred hHHH-HHHHHHHHHHhcCCceEEEcCCCCCCHHHHHHHHHHHHHhCCCCC
Q 018479 222 TLEE-IDVEYKELALKSGIEKWGRVPALGCEATFISDLADAVIESLPYVG 270 (355)
Q Consensus 222 Tl~e-id~e~~e~a~~~G~~~~~rv~~ln~~p~fi~~La~~V~e~l~~~~ 270 (355)
+..| +...+++.. ..+...++.++...+||.||+++++.|++++....
T Consensus 137 s~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~p~yI~a~a~~I~~~l~~~~ 185 (359)
T 3hcn_A 137 SSLNAIYRYYNQVG-RKPTMKWSTIDRWPTHHLLIQCFADHILKELDHFP 185 (359)
T ss_dssp HHHHHHHHHHHHTT-CCCSSEEEEECCCTTCHHHHHHHHHHHHHHHTTSC
T ss_pred hHHHHHHHHHHHhc-cCCCCceEEeCCccCCHHHHHHHHHHHHHHHHhCC
Confidence 5443 222222221 12222589999999999999999999999887653
No 19
>2bhw_A Chlorophyll A-B binding protein AB80; LHC-II, photosynthesis, light-harvesting, membrane protein, chloroplast, chromophore, membrane; HET: LUX NEX XAT CLA CHL LHG DGD; 2.50A {Pisum sativum} PDB: 1vcr_A* 1rwt_A*
Probab=97.88 E-value=6.6e-06 Score=75.55 Aligned_cols=34 Identities=32% Similarity=0.501 Sum_probs=31.6
Q ss_pred chhhhhhhHHHHHHHHHHHHHHHHhCcchhhhhc
Q 018479 316 RSAETWNGRAAMLAVLVLLVLEVTTGEGFLHQWG 349 (355)
Q Consensus 316 ~~~e~~ngr~am~g~~~~~~~e~~~g~~~~~~~~ 349 (355)
..+|+.|||+||+||+..++.|.+||+|++.++.
T Consensus 177 ~~~E~~nGRlAM~~~~g~~~~~~~tg~g~~~~l~ 210 (232)
T 2bhw_A 177 KVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLA 210 (232)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCSCSHHHHH
T ss_pred HHhhhhccchHHHHHHHHHHHHHhcCCChHHHHH
Confidence 3689999999999999999999999999999874
No 20
>3pl9_A Chlorophyll A-B binding protein; CP29, light-harvesting COMP membrane protein, plant, photosynthesis, chloroplast, thyla photosystem II; HET: CLA CHL LUT XAT NEX G3P HTG; 2.80A {Spinacia oleracea}
Probab=97.79 E-value=1.2e-05 Score=73.82 Aligned_cols=35 Identities=34% Similarity=0.454 Sum_probs=32.2
Q ss_pred cchhhhhhhHHHHHHHHHHHHHHHHhCcchhhhhc
Q 018479 315 TRSAETWNGRAAMLAVLVLLVLEVTTGEGFLHQWG 349 (355)
Q Consensus 315 ~~~~e~~ngr~am~g~~~~~~~e~~~g~~~~~~~~ 349 (355)
...+|+.|||+||+||+..++.|++||+|+++++.
T Consensus 193 ~r~~ElknGRlAMla~~g~~~q~~vtG~Gpl~~l~ 227 (243)
T 3pl9_A 193 LQLAEIKHARLAMVGFLGFAVQAAVTGKGPLNNWV 227 (243)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSSCHHHHHH
T ss_pred HHHHHHhhccHHHHHHHHHHHHHHhcCCChHHHHH
Confidence 34699999999999999999999999999999874
No 21
>2wsc_2 LHCA2, type II chlorophyll A/B binding protein from photosystem I; photosynthesis, electron transfer, membrane proteins, large complexes; HET: CL1 PQN BCR LMU LMG SUC UNL; 3.30A {Pisum sativum} PDB: 2wse_2* 2wsf_2* 2o01_2* 3lw5_2*
Probab=97.62 E-value=7.3e-06 Score=76.64 Aligned_cols=38 Identities=34% Similarity=0.316 Sum_probs=34.1
Q ss_pred CCCcchhhhhhhHHHHHHHHHHHHHHHHhCcchhhhhc
Q 018479 312 WGWTRSAETWNGRAAMLAVLVLLVLEVTTGEGFLHQWG 349 (355)
Q Consensus 312 ~g~~~~~e~~ngr~am~g~~~~~~~e~~~g~~~~~~~~ 349 (355)
+.....+|+.|||+||+||+..++.|.+||+|+++++.
T Consensus 214 ~~~~~~~Ei~nGRlAMla~~g~~~~~~~tg~g~l~~l~ 251 (269)
T 2wsc_2 214 LKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLF 251 (269)
T ss_dssp CTTSTTTTHHHHHHHHTTTSSSCHHHHHTTTCSSCCCS
T ss_pred HHHHHHhhcccchHHHHHHHHHHHHHHhcCCChHHHHH
Confidence 44456799999999999999999999999999999876
No 22
>2wsc_3 LHCA3, type II chlorophyll A/B binding protein from photosystem I; photosynthesis, electron transfer, membrane proteins, large complexes; HET: CL1 PQN BCR LMU LMG SUC UNL; 3.30A {Glycine max} PDB: 2wse_3* 2wsf_3* 3lw5_3* 2o01_3*
Probab=97.54 E-value=1.5e-05 Score=74.86 Aligned_cols=36 Identities=36% Similarity=0.344 Sum_probs=30.6
Q ss_pred CcchhhhhhhHHHHHHHHHHHHHHHHhCcchhhhhc
Q 018479 314 WTRSAETWNGRAAMLAVLVLLVLEVTTGEGFLHQWG 349 (355)
Q Consensus 314 ~~~~~e~~ngr~am~g~~~~~~~e~~~g~~~~~~~~ 349 (355)
....+|+.|||+||+||+..++.|++||+|++.++.
T Consensus 223 ~~r~~Ei~nGRlAMla~~g~~~~~~~tg~g~~~~l~ 258 (276)
T 2wsc_3 223 DLKLKEVKNGRLAMLAILGYFVQALVTGVGPYQNLL 258 (276)
T ss_dssp --CCSHHHHHHHHHHHHHHHHSSCCCCSSCCSCC--
T ss_pred HHHHhhhcccchHHHHHHHHHHHHHhcCCChHHHHH
Confidence 345689999999999999999999999999998864
No 23
>2wsc_1 AT3G54890, LHCA1; photosynthesis, electron transfer, membrane proteins, large complexes; HET: CL1 PQN BCR LMU LMG SUC UNL; 3.30A {Arabidopsis thaliana} PDB: 2wse_1* 2wsf_1* 2o01_1* 3lw5_1*
Probab=97.26 E-value=5.1e-05 Score=69.86 Aligned_cols=36 Identities=31% Similarity=0.367 Sum_probs=31.9
Q ss_pred cchhhhhhhHHHHHHHHHHHHHH-HHhCcchhhhhcc
Q 018479 315 TRSAETWNGRAAMLAVLVLLVLE-VTTGEGFLHQWGI 350 (355)
Q Consensus 315 ~~~~e~~ngr~am~g~~~~~~~e-~~~g~~~~~~~~~ 350 (355)
-..+|+.|||+||+||+..++.| .+||+|++++++-
T Consensus 187 ~r~~E~~nGRlAM~a~~g~~~~~~~~tG~gpl~~l~~ 223 (241)
T 2wsc_1 187 LKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLAT 223 (241)
T ss_dssp SCTTHHHHHHHHHHHHHSGGGGGSSSCCSCCCCCSSC
T ss_pred HHHhhcccccHHHHHHHHHHHhhhhcCCCchHHHHHH
Confidence 34699999999999999999999 5899999998764
No 24
>2wsc_4 Chlorophyll A-B binding protein P4, chloroplastic; photosynthesis, electron transfer, membrane proteins, large complexes; HET: CL1 PQN BCR LMU LMG SUC UNL; 3.30A {Pisum sativum} PDB: 2wse_4* 2wsf_4* 3lw5_4* 2o01_4*
Probab=97.09 E-value=5.3e-05 Score=70.25 Aligned_cols=37 Identities=41% Similarity=0.467 Sum_probs=33.2
Q ss_pred ccCCCcchhhhhhhHHHHHHHHHHHHHHHHhCcchhh
Q 018479 310 WEWGWTRSAETWNGRAAMLAVLVLLVLEVTTGEGFLH 346 (355)
Q Consensus 310 ~~~g~~~~~e~~ngr~am~g~~~~~~~e~~~g~~~~~ 346 (355)
-.+.+...+|++|||+||+||+..++.|++++.|++.
T Consensus 86 e~~~~~r~aEl~hGR~AMla~~G~~~~e~~~~~g~~~ 122 (251)
T 2wsc_4 86 ENLRWFVQAELVNGRWAMLGVAGMLLPEVFTSIGIIN 122 (251)
T ss_dssp CCTTTTHHHHHHHTHHHHHHHTTSSTTSSSCCSCSSC
T ss_pred HHHHHHHHHHHhccchHHHHHHHHHHHHHhcCCCccC
Confidence 3577888999999999999999999999999988763
No 25
>2wsc_3 LHCA3, type II chlorophyll A/B binding protein from photosystem I; photosynthesis, electron transfer, membrane proteins, large complexes; HET: CL1 PQN BCR LMU LMG SUC UNL; 3.30A {Glycine max} PDB: 2wse_3* 2wsf_3* 3lw5_3* 2o01_3*
Probab=96.42 E-value=6.1e-05 Score=70.63 Aligned_cols=33 Identities=30% Similarity=0.483 Sum_probs=30.6
Q ss_pred CCcchhhhhhhHHHHHHHHHHHHHHHHhCcchh
Q 018479 313 GWTRSAETWNGRAAMLAVLVLLVLEVTTGEGFL 345 (355)
Q Consensus 313 g~~~~~e~~ngr~am~g~~~~~~~e~~~g~~~~ 345 (355)
+|...+|++|||+||+||+..++.|++++.|++
T Consensus 97 ~~~r~aEl~hGR~AMLa~~G~l~~E~~~~~g~~ 129 (276)
T 2wsc_3 97 KWLAYGEIINGRYAMLGAVGAIAPEILGKAGLI 129 (276)
T ss_dssp THHHHHHHHHHTTSCCTTTSTTSCSSCSSCCCC
T ss_pred HHHHHHHhhcccchhhhHHHHHHHHHhcccccc
Confidence 778899999999999999999999999988765
No 26
>3pl9_A Chlorophyll A-B binding protein; CP29, light-harvesting COMP membrane protein, plant, photosynthesis, chloroplast, thyla photosystem II; HET: CLA CHL LUT XAT NEX G3P HTG; 2.80A {Spinacia oleracea}
Probab=96.41 E-value=0.0013 Score=60.39 Aligned_cols=31 Identities=42% Similarity=0.357 Sum_probs=26.7
Q ss_pred CCCcchhhhhhhHHHHHHHHHHHHHHHHhCc
Q 018479 312 WGWTRSAETWNGRAAMLAVLVLLVLEVTTGE 342 (355)
Q Consensus 312 ~g~~~~~e~~ngr~am~g~~~~~~~e~~~g~ 342 (355)
+-+...+|+.|||+||+|++..++.|+.+|-
T Consensus 89 l~r~ReaELkHGRwAMLAvlG~lvpE~l~g~ 119 (243)
T 3pl9_A 89 LQRFRECELIHGRWAMLATLGALTVEGLTGI 119 (243)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred hHHHHHhhhhcchhHHHHHHHHHhHHhhcCc
Confidence 4445579999999999999999999998763
No 27
>2wsc_4 Chlorophyll A-B binding protein P4, chloroplastic; photosynthesis, electron transfer, membrane proteins, large complexes; HET: CL1 PQN BCR LMU LMG SUC UNL; 3.30A {Pisum sativum} PDB: 2wse_4* 2wsf_4* 3lw5_4* 2o01_4*
Probab=96.41 E-value=0.00085 Score=62.14 Aligned_cols=33 Identities=33% Similarity=0.434 Sum_probs=30.4
Q ss_pred chhhhhhhHHHHHHHHHHHHHHHHhCcchhhhhc
Q 018479 316 RSAETWNGRAAMLAVLVLLVLEVTTGEGFLHQWG 349 (355)
Q Consensus 316 ~~~e~~ngr~am~g~~~~~~~e~~~g~~~~~~~~ 349 (355)
+..|+-|||+ ||||+..++.|.+||++++.++.
T Consensus 201 k~kELkNGRL-MlAilGf~vQe~vTG~gPl~nL~ 233 (251)
T 2wsc_4 201 KEKEIANGRL-MLAFLGFIIQHNVTGKGPFDNLL 233 (251)
T ss_dssp TTHHHHHHHT-TTTHHHHHHHHTTSCCCCCCCTT
T ss_pred HHHHHhcchh-HHHHHHHHHHHHhcCccHHHHHH
Confidence 4689999999 99999999999999999998764
No 28
>2wsc_2 LHCA2, type II chlorophyll A/B binding protein from photosystem I; photosynthesis, electron transfer, membrane proteins, large complexes; HET: CL1 PQN BCR LMU LMG SUC UNL; 3.30A {Pisum sativum} PDB: 2wse_2* 2wsf_2* 2o01_2* 3lw5_2*
Probab=96.04 E-value=0.0021 Score=60.00 Aligned_cols=35 Identities=31% Similarity=0.394 Sum_probs=30.7
Q ss_pred cCCCcchhhhhhhHHHHHHHHHHHHHHHHhCcchh
Q 018479 311 EWGWTRSAETWNGRAAMLAVLVLLVLEVTTGEGFL 345 (355)
Q Consensus 311 ~~g~~~~~e~~ngr~am~g~~~~~~~e~~~g~~~~ 345 (355)
.+.+...+|+.|||+||+|++..++.|++++.|++
T Consensus 98 ~~~~~r~aElkHGR~AMLA~~G~l~~E~l~~~G~~ 132 (269)
T 2wsc_2 98 SLRWNVQAELVHSRWAMLGAAGIFIPEFLTKLGIL 132 (269)
T ss_dssp CCTTTHHHHHHTHHHHTTTTHHHHHHHHHCCTTSS
T ss_pred HHHHHHHHHHhcchHHHHHHHHhHhHHhhccCCcc
Confidence 45667789999999999999999999999987665
No 29
>2bhw_A Chlorophyll A-B binding protein AB80; LHC-II, photosynthesis, light-harvesting, membrane protein, chloroplast, chromophore, membrane; HET: LUX NEX XAT CLA CHL LHG DGD; 2.50A {Pisum sativum} PDB: 1vcr_A* 1rwt_A*
Probab=95.10 E-value=0.013 Score=53.58 Aligned_cols=26 Identities=31% Similarity=0.288 Sum_probs=23.7
Q ss_pred chhhhhhhHHHHHHHHHHHHHHHHhC
Q 018479 316 RSAETWNGRAAMLAVLVLLVLEVTTG 341 (355)
Q Consensus 316 ~~~e~~ngr~am~g~~~~~~~e~~~g 341 (355)
..+|+.|||+||+|++..++.|+++.
T Consensus 62 ReaELkHGR~AMLA~~G~lv~E~l~~ 87 (232)
T 2bhw_A 62 RELEVIHSRWAMLGALGSVFPELLSR 87 (232)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhccchHHHhhhhhhhHHHhcc
Confidence 46999999999999999999999764
No 30
>2wsc_1 AT3G54890, LHCA1; photosynthesis, electron transfer, membrane proteins, large complexes; HET: CL1 PQN BCR LMU LMG SUC UNL; 3.30A {Arabidopsis thaliana} PDB: 2wse_1* 2wsf_1* 2o01_1* 3lw5_1*
Probab=85.01 E-value=0.037 Score=50.78 Aligned_cols=27 Identities=37% Similarity=0.266 Sum_probs=23.1
Q ss_pred CcchhhhhhhHHHHHHHHHHHHHHHHh
Q 018479 314 WTRSAETWNGRAAMLAVLVLLVLEVTT 340 (355)
Q Consensus 314 ~~~~~e~~ngr~am~g~~~~~~~e~~~ 340 (355)
+...+|+.|||+||++++..++.|+++
T Consensus 82 ~~r~~El~hgR~AMla~~G~~~~e~~~ 108 (241)
T 2wsc_1 82 RYKESELIHCRWAMLAVPGILVPEALG 108 (241)
T ss_dssp HSHHHHHHHHHHHTTTSTTSSSTTCCC
T ss_pred HHHHHHHhhchhHHhhhhcccchhhcc
Confidence 345799999999999999999988753
No 31
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=55.35 E-value=1.1e+02 Score=28.13 Aligned_cols=93 Identities=20% Similarity=0.220 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHHHhcccccCCceeEEEEecccCCCCCCCcHHHHHHH---HHhcCCceEEEEcceecccchhhHHHHHH
Q 018479 152 KAEMEECVDLIMEELEKRKITNAYTLAYQSRVGPVEWLKPYTDETIIK---LGQKGVKSLLAVPISFVSEHIETLEEIDV 228 (355)
Q Consensus 152 ~~~~~~ta~~v~e~l~~~~~~~~~~l~fQS~~G~~~Wl~P~~~d~l~~---L~~~G~k~VvVvP~gFvsD~lETl~eid~ 228 (355)
..|-.+..+.+.+..+.+ +.+-.. .| ..+|.++++. ..+.|++.++++||.|..-.-|-+++
T Consensus 59 ~~Er~~v~~~~~~~~~gr-----vpviaG--vg-----~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~--- 123 (297)
T 3flu_A 59 VEEHTAVIEAVVKHVAKR-----VPVIAG--TG-----ANNTVEAIALSQAAEKAGADYTLSVVPYYNKPSQEGIYQ--- 123 (297)
T ss_dssp HHHHHHHHHHHHHHHTTS-----SCEEEE--CC-----CSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHH---
T ss_pred HHHHHHHHHHHHHHhCCC-----CcEEEe--CC-----CcCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHH---
Confidence 556666677777766432 233332 23 5788888875 44569999999998876555555554
Q ss_pred HHHHHHHhcCCceEEE-cC---CCCCCHHHHHHHH
Q 018479 229 EYKELALKSGIEKWGR-VP---ALGCEATFISDLA 259 (355)
Q Consensus 229 e~~e~a~~~G~~~~~r-v~---~ln~~p~fi~~La 259 (355)
-++++++..+..-+.| +| -.+-+++.+..|+
T Consensus 124 ~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La 158 (297)
T 3flu_A 124 HFKTIAEATSIPMIIYNVPGRTVVSMTNDTILRLA 158 (297)
T ss_dssp HHHHHHHHCCSCEEEEECHHHHSSCCCHHHHHHHT
T ss_pred HHHHHHHhCCCCEEEEECCchhccCCCHHHHHHHH
Confidence 5778887766654433 22 2566777666554
No 32
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=55.01 E-value=1.1e+02 Score=27.86 Aligned_cols=94 Identities=15% Similarity=0.205 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHHHHhcccccCCceeEEEEecccCCCCCCCcHHHHHHH---HHhcCCceEEEEcceecccchhhHHHHHH
Q 018479 152 KAEMEECVDLIMEELEKRKITNAYTLAYQSRVGPVEWLKPYTDETIIK---LGQKGVKSLLAVPISFVSEHIETLEEIDV 228 (355)
Q Consensus 152 ~~~~~~ta~~v~e~l~~~~~~~~~~l~fQS~~G~~~Wl~P~~~d~l~~---L~~~G~k~VvVvP~gFvsD~lETl~eid~ 228 (355)
..|-.+..+.+.+..+.+ +.+--. .| ..+|.++++. ..+.|++.++++||.|..-.-|-+++
T Consensus 54 ~~Er~~v~~~~~~~~~gr-----vpviaG--vg-----~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~--- 118 (292)
T 3daq_A 54 TDEKELILKTVIDLVDKR-----VPVIAG--TG-----TNDTEKSIQASIQAKALGADAIMLITPYYNKTNQRGLVK--- 118 (292)
T ss_dssp HHHHHHHHHHHHHHHTTS-----SCEEEE--CC-----CSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHH---
T ss_pred HHHHHHHHHHHHHHhCCC-----CcEEEe--CC-----cccHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHH---
Confidence 556666777777766422 233332 23 5788888875 34569999999998876655555554
Q ss_pred HHHHHHHhcCCceEEE-cC---CCCCCHHHHHHHHH
Q 018479 229 EYKELALKSGIEKWGR-VP---ALGCEATFISDLAD 260 (355)
Q Consensus 229 e~~e~a~~~G~~~~~r-v~---~ln~~p~fi~~La~ 260 (355)
-++.+++..++.-+.| +| -.+-+++.+..|++
T Consensus 119 ~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 154 (292)
T 3daq_A 119 HFEAIADAVKLPVVLYNVPSRTNMTIEPETVEILSQ 154 (292)
T ss_dssp HHHHHHHHHCSCEEEEECHHHHSCCCCHHHHHHHHT
T ss_pred HHHHHHHhCCCCEEEEecccccCCCCCHHHHHHHhc
Confidence 5677777666653333 22 35777887777765
No 33
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=54.00 E-value=1.4e+02 Score=27.70 Aligned_cols=94 Identities=18% Similarity=0.258 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHHHHhcccccCCceeEEEEecccCCCCCCCcHHHHHHH---HHhcCCceEEEEcceecccchhhHHHHHH
Q 018479 152 KAEMEECVDLIMEELEKRKITNAYTLAYQSRVGPVEWLKPYTDETIIK---LGQKGVKSLLAVPISFVSEHIETLEEIDV 228 (355)
Q Consensus 152 ~~~~~~ta~~v~e~l~~~~~~~~~~l~fQS~~G~~~Wl~P~~~d~l~~---L~~~G~k~VvVvP~gFvsD~lETl~eid~ 228 (355)
..|-.+..+.+.+..+.+ +.+-.. .| ..+|.++++. ..+.|++.++++||.|..-.-|-+++
T Consensus 74 ~~Er~~v~~~~v~~~~gr-----vpViaG--vg-----~~st~~ai~la~~A~~~Gadavlv~~P~y~~~~~~~l~~--- 138 (315)
T 3si9_A 74 HEEHKRIIELCVEQVAKR-----VPVVAG--AG-----SNSTSEAVELAKHAEKAGADAVLVVTPYYNRPNQRGLYT--- 138 (315)
T ss_dssp HHHHHHHHHHHHHHHTTS-----SCBEEE--CC-----CSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHH---
T ss_pred HHHHHHHHHHHHHHhCCC-----CcEEEe--CC-----CCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHH---
Confidence 556666677777766432 223322 22 5788888875 45569999999998876655555554
Q ss_pred HHHHHHHhcCCceEEE-cC---CCCCCHHHHHHHHH
Q 018479 229 EYKELALKSGIEKWGR-VP---ALGCEATFISDLAD 260 (355)
Q Consensus 229 e~~e~a~~~G~~~~~r-v~---~ln~~p~fi~~La~ 260 (355)
-++.+++..++.-+.| +| -.+-+++.+..|++
T Consensus 139 ~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 174 (315)
T 3si9_A 139 HFSSIAKAISIPIIIYNIPSRSVIDMAVETMRDLCR 174 (315)
T ss_dssp HHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHH
T ss_pred HHHHHHHcCCCCEEEEeCchhhCCCCCHHHHHHHHh
Confidence 6678887766653333 22 25677777766665
No 34
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=52.15 E-value=1.3e+02 Score=27.74 Aligned_cols=93 Identities=20% Similarity=0.228 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHHHHhcccccCCceeEEEEecccCCCCCCCcHHHHHHHH---HhcCCceEEEEcceecccchhhHHHHHH
Q 018479 152 KAEMEECVDLIMEELEKRKITNAYTLAYQSRVGPVEWLKPYTDETIIKL---GQKGVKSLLAVPISFVSEHIETLEEIDV 228 (355)
Q Consensus 152 ~~~~~~ta~~v~e~l~~~~~~~~~~l~fQS~~G~~~Wl~P~~~d~l~~L---~~~G~k~VvVvP~gFvsD~lETl~eid~ 228 (355)
..|-.+..+.+.+..+.+ +.+-.. .| ..+|.++++.. .+.|++.|+++||.|..-.-|-+++
T Consensus 67 ~~Er~~v~~~~~~~~~gr-----vpviaG--vg-----~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~--- 131 (304)
T 3l21_A 67 DGEKIELLRAVLEAVGDR-----ARVIAG--AG-----TYDTAHSIRLAKACAAEGAHGLLVVTPYYSKPPQRGLQA--- 131 (304)
T ss_dssp HHHHHHHHHHHHHHHTTT-----SEEEEE--CC-----CSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHH---
T ss_pred HHHHHHHHHHHHHHhCCC-----CeEEEe--CC-----CCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHH---
Confidence 556666677777766432 334333 23 57888887763 4569999999998877765555554
Q ss_pred HHHHHHHhcCCceEEE-cC---CCCCCHHHHHHHH
Q 018479 229 EYKELALKSGIEKWGR-VP---ALGCEATFISDLA 259 (355)
Q Consensus 229 e~~e~a~~~G~~~~~r-v~---~ln~~p~fi~~La 259 (355)
-++++++..++.-+.| +| -.+-+++.+..|+
T Consensus 132 ~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La 166 (304)
T 3l21_A 132 HFTAVADATELPMLLYDIPGRSAVPIEPDTIRALA 166 (304)
T ss_dssp HHHHHHTSCSSCEEEEECHHHHSSCCCHHHHHHHH
T ss_pred HHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHh
Confidence 6788887766654433 22 2566777776665
No 35
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=51.33 E-value=1.5e+02 Score=27.21 Aligned_cols=95 Identities=20% Similarity=0.257 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHHHHhcc-cccCCceeEEEEecccCCCCCCCcHHHHHHH---HHhcCCceEEEEcceecccchhhHHHHH
Q 018479 152 KAEMEECVDLIMEELEK-RKITNAYTLAYQSRVGPVEWLKPYTDETIIK---LGQKGVKSLLAVPISFVSEHIETLEEID 227 (355)
Q Consensus 152 ~~~~~~ta~~v~e~l~~-~~~~~~~~l~fQS~~G~~~Wl~P~~~d~l~~---L~~~G~k~VvVvP~gFvsD~lETl~eid 227 (355)
..|-.+..+.+.+..+. + +.+-.. .| ..+|.++++. ..+.|++.++++||.|..-.-|-+++
T Consensus 59 ~~Er~~v~~~~~~~~~g~r-----vpviaG--vg-----~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~-- 124 (301)
T 3m5v_A 59 HEEHRTCIEIAVETCKGTK-----VKVLAG--AG-----SNATHEAVGLAKFAKEHGADGILSVAPYYNKPTQQGLYE-- 124 (301)
T ss_dssp HHHHHHHHHHHHHHHTTSS-----CEEEEE--CC-----CSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHH--
T ss_pred HHHHHHHHHHHHHHhCCCC-----CeEEEe--CC-----CCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHH--
Confidence 55666677777776643 2 333332 23 5788888875 44569999999998877655555555
Q ss_pred HHHHHHHHhcCCceEEE-cC---CCCCCHHHHHHHHHH
Q 018479 228 VEYKELALKSGIEKWGR-VP---ALGCEATFISDLADA 261 (355)
Q Consensus 228 ~e~~e~a~~~G~~~~~r-v~---~ln~~p~fi~~La~~ 261 (355)
-++++++..++.-+.| +| -.+-+++.+..|++.
T Consensus 125 -~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~ 161 (301)
T 3m5v_A 125 -HYKAIAQSVDIPVLLYNVPGRTGCEISTDTIIKLFRD 161 (301)
T ss_dssp -HHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHH
T ss_pred -HHHHHHHhCCCCEEEEeCchhhCcCCCHHHHHHHHhc
Confidence 6778887766653333 22 357788887777753
No 36
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=50.87 E-value=8.9 Score=30.93 Aligned_cols=45 Identities=13% Similarity=-0.075 Sum_probs=32.4
Q ss_pred CcHHHHHHHHHhcCCceEEEEcceecccchhhHHHHHHHHHHHHHhcCCceEEEcCCC
Q 018479 191 PYTDETIIKLGQKGVKSLLAVPISFVSEHIETLEEIDVEYKELALKSGIEKWGRVPAL 248 (355)
Q Consensus 191 P~~~d~l~~L~~~G~k~VvVvP~gFvsD~lETl~eid~e~~e~a~~~G~~~~~rv~~l 248 (355)
..+.+.++++.+.|+|. +++-.||.. .|+.+.++++|+. +.- .|+
T Consensus 69 ~~v~~~v~e~~~~g~k~-v~~~~G~~~----------~e~~~~a~~~Gir-vv~-nC~ 113 (122)
T 3ff4_A 69 QNQLSEYNYILSLKPKR-VIFNPGTEN----------EELEEILSENGIE-PVI-GCT 113 (122)
T ss_dssp HHHGGGHHHHHHHCCSE-EEECTTCCC----------HHHHHHHHHTTCE-EEE-SCH
T ss_pred HHHHHHHHHHHhcCCCE-EEECCCCCh----------HHHHHHHHHcCCe-EEC-CcC
Confidence 35667889999999986 567778842 3788899999985 442 443
No 37
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=47.58 E-value=1.7e+02 Score=26.97 Aligned_cols=93 Identities=15% Similarity=0.193 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHHHHhcccccCCceeEEEEecccCCCCCCCcHHHHHHH---HHhcCCceEEEEcceecccchhhHHHHHH
Q 018479 152 KAEMEECVDLIMEELEKRKITNAYTLAYQSRVGPVEWLKPYTDETIIK---LGQKGVKSLLAVPISFVSEHIETLEEIDV 228 (355)
Q Consensus 152 ~~~~~~ta~~v~e~l~~~~~~~~~~l~fQS~~G~~~Wl~P~~~d~l~~---L~~~G~k~VvVvP~gFvsD~lETl~eid~ 228 (355)
..|-.+..+.+.+..+.+ +.+-.. .| ..+|.++++. ..+.|++.++++||.|..-.-|-+++
T Consensus 75 ~~Er~~v~~~~v~~~~gr-----vpViaG--vg-----~~st~eai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~--- 139 (314)
T 3qze_A 75 VEEHIQVIRRVVDQVKGR-----IPVIAG--TG-----ANSTREAVALTEAAKSGGADACLLVTPYYNKPTQEGMYQ--- 139 (314)
T ss_dssp HHHHHHHHHHHHHHHTTS-----SCEEEE--CC-----CSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHH---
T ss_pred HHHHHHHHHHHHHHhCCC-----CcEEEe--CC-----CcCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHH---
Confidence 556666677777766432 233332 23 5788888875 44569999999998776555555554
Q ss_pred HHHHHHHhcCCceEEE-cC---CCCCCHHHHHHHH
Q 018479 229 EYKELALKSGIEKWGR-VP---ALGCEATFISDLA 259 (355)
Q Consensus 229 e~~e~a~~~G~~~~~r-v~---~ln~~p~fi~~La 259 (355)
-++++++..++.-+.| +| -.+-+++.+..|+
T Consensus 140 ~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La 174 (314)
T 3qze_A 140 HFRHIAEAVAIPQILYNVPGRTSCDMLPETVERLS 174 (314)
T ss_dssp HHHHHHHHSCSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred HHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHh
Confidence 5778887766653333 22 2567777766665
No 38
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=45.38 E-value=1.9e+02 Score=26.74 Aligned_cols=92 Identities=17% Similarity=0.298 Sum_probs=58.2
Q ss_pred HHHHHHHHHHHHHHhcccccCCceeEEEEecccCCCCCCCcHHHHHHH---HHhcCCceEEEEcceecccchhhHHHHHH
Q 018479 152 KAEMEECVDLIMEELEKRKITNAYTLAYQSRVGPVEWLKPYTDETIIK---LGQKGVKSLLAVPISFVSEHIETLEEIDV 228 (355)
Q Consensus 152 ~~~~~~ta~~v~e~l~~~~~~~~~~l~fQS~~G~~~Wl~P~~~d~l~~---L~~~G~k~VvVvP~gFvsD~lETl~eid~ 228 (355)
..|-.+..+.+.+..+.+ +.+-.. .| ..+|.++++. ..+.|++.++++||.|..-.-|-+++
T Consensus 76 ~~Er~~v~~~~v~~~~gr-----vpViaG--vg-----~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~--- 140 (315)
T 3na8_A 76 DPEWDEVVDFTLKTVAHR-----VPTIVS--VS-----DLTTAKTVRRAQFAESLGAEAVMVLPISYWKLNEAEVFQ--- 140 (315)
T ss_dssp HHHHHHHHHHHHHHHTTS-----SCBEEE--CC-----CSSHHHHHHHHHHHHHTTCSEEEECCCCSSCCCHHHHHH---
T ss_pred HHHHHHHHHHHHHHhCCC-----CcEEEe--cC-----CCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHH---
Confidence 556666777777766432 223332 22 5788888775 44569999999998876655555554
Q ss_pred HHHHHHHhcCCceEEE-cC---CCCCCHHHHHHH
Q 018479 229 EYKELALKSGIEKWGR-VP---ALGCEATFISDL 258 (355)
Q Consensus 229 e~~e~a~~~G~~~~~r-v~---~ln~~p~fi~~L 258 (355)
-++++++..++.-+.| +| -.+-+++++..|
T Consensus 141 ~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~L 174 (315)
T 3na8_A 141 HYRAVGEAIGVPVMLYNNPGTSGIDMSVELILRI 174 (315)
T ss_dssp HHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHH
T ss_pred HHHHHHHhCCCcEEEEeCcchhCcCCCHHHHHHH
Confidence 6778887766653333 22 246677776666
No 39
>3bdk_A D-mannonate dehydratase; xylose isomerase-like TIM barrel, lyase; HET: DNO; 2.50A {Streptococcus suis} PDB: 3ban_A* 3dbn_A* 3fvm_A
Probab=44.88 E-value=22 Score=34.43 Aligned_cols=65 Identities=15% Similarity=0.257 Sum_probs=43.0
Q ss_pred CCCCCcHHHHHHHHHhc-CCceEEEEcceecccchhhHHHHHHHHHHHHHhcCCceEEEcCCCCCCHH
Q 018479 187 EWLKPYTDETIIKLGQK-GVKSLLAVPISFVSEHIETLEEIDVEYKELALKSGIEKWGRVPALGCEAT 253 (355)
Q Consensus 187 ~Wl~P~~~d~l~~L~~~-G~k~VvVvP~gFvsD~lETl~eid~e~~e~a~~~G~~~~~rv~~ln~~p~ 253 (355)
.|.+|.-...|+++++. |++.|.+.+.-+.....-+..++. +.++..++.|+. +.-+.+++-++.
T Consensus 26 rW~g~~d~~~L~~i~q~~G~~gIe~~l~~~~~g~~w~~~~i~-~lk~~l~~~GL~-i~~i~s~~~~~~ 91 (386)
T 3bdk_A 26 RWYGKKDPVTLEEIKAIPGMQGIVTAVYDVPVGQAWPLENIL-ELKKMVEEAGLE-ITVIESIPVHED 91 (386)
T ss_dssp BCCCTTCSSCHHHHHTSTTCCEEEECCCSSCSSSCCCHHHHH-HHHHHHHTTTCE-EEEEECCCCCHH
T ss_pred EecCCCCHHHHHHHHhcCCCCEEEeCCcccCCCCCCCHHHHH-HHHHHHHHcCCE-EEEEeccccccc
Confidence 47788777799999999 999998875322211111223332 467788889985 777767666643
No 40
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=44.23 E-value=1.4e+02 Score=25.81 Aligned_cols=11 Identities=18% Similarity=0.144 Sum_probs=5.8
Q ss_pred HHHHHHhcCCc
Q 018479 230 YKELALKSGIE 240 (355)
Q Consensus 230 ~~e~a~~~G~~ 240 (355)
.-+.|.+.|..
T Consensus 96 ~i~~A~~lGa~ 106 (262)
T 3p6l_A 96 MFKFAKAMDLE 106 (262)
T ss_dssp HHHHHHHTTCS
T ss_pred HHHHHHHcCCC
Confidence 34455556654
No 41
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=43.89 E-value=1.8e+02 Score=26.53 Aligned_cols=93 Identities=17% Similarity=0.203 Sum_probs=58.2
Q ss_pred HHHHHHHHHHHHHHhcccccCCceeEEEEecccCCCCCCCcHHHHHHH---HHhcCCceEEEEcceecccchhhHHHHHH
Q 018479 152 KAEMEECVDLIMEELEKRKITNAYTLAYQSRVGPVEWLKPYTDETIIK---LGQKGVKSLLAVPISFVSEHIETLEEIDV 228 (355)
Q Consensus 152 ~~~~~~ta~~v~e~l~~~~~~~~~~l~fQS~~G~~~Wl~P~~~d~l~~---L~~~G~k~VvVvP~gFvsD~lETl~eid~ 228 (355)
..|-.+..+.+.+..+.+ .++... .| ..+|.++++. ..+.|++.++++||.|..-+-|-+++
T Consensus 56 ~~Er~~v~~~~~~~~~gr---vpviaG----vg-----~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~--- 120 (300)
T 3eb2_A 56 TAQREAVVRATIEAAQRR---VPVVAG----VA-----STSVADAVAQAKLYEKLGADGILAILEAYFPLKDAQIES--- 120 (300)
T ss_dssp HHHHHHHHHHHHHHHTTS---SCBEEE----EE-----ESSHHHHHHHHHHHHHHTCSEEEEEECCSSCCCHHHHHH---
T ss_pred HHHHHHHHHHHHHHhCCC---CcEEEe----CC-----CCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHH---
Confidence 556666677777766432 123222 22 4778888775 44569999999998877655555554
Q ss_pred HHHHHHHhcCCceEEE-cCC---CCCCHHHHHHHH
Q 018479 229 EYKELALKSGIEKWGR-VPA---LGCEATFISDLA 259 (355)
Q Consensus 229 e~~e~a~~~G~~~~~r-v~~---ln~~p~fi~~La 259 (355)
-++.+++..++.-+.| +|. .+-+++.+..|+
T Consensus 121 ~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La 155 (300)
T 3eb2_A 121 YFRAIADAVEIPVVIYTNPQFQRSDLTLDVIARLA 155 (300)
T ss_dssp HHHHHHHHCSSCEEEEECTTTCSSCCCHHHHHHHH
T ss_pred HHHHHHHHCCCCEEEEECccccCCCCCHHHHHHHH
Confidence 6778887766653333 333 356777766664
No 42
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=43.62 E-value=1.9e+02 Score=26.28 Aligned_cols=89 Identities=18% Similarity=0.107 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHH-hcccccCCceeEEEEecccCCCCCCCcHHHHHHHHHhcCCceEEEEcceecccchhhHHHHHHHHHH
Q 018479 154 EMEECVDLIMEE-LEKRKITNAYTLAYQSRVGPVEWLKPYTDETIIKLGQKGVKSLLAVPISFVSEHIETLEEIDVEYKE 232 (355)
Q Consensus 154 ~~~~ta~~v~e~-l~~~~~~~~~~l~fQS~~G~~~Wl~P~~~d~l~~L~~~G~k~VvVvP~gFvsD~lETl~eid~e~~e 232 (355)
++.+..+.+++. .... =+-++|.+-+ ..-.++.-++++++.|++.+++.-..+ |. ..++++
T Consensus 83 ~~~~~v~~~r~~~~~~P----ivlm~Y~n~v-----~~~g~~~f~~~~~~aGvdGvIipDlp~-----ee----~~~~~~ 144 (271)
T 3nav_A 83 ICFELIAQIRARNPETP----IGLLMYANLV-----YARGIDDFYQRCQKAGVDSVLIADVPT-----NE----SQPFVA 144 (271)
T ss_dssp HHHHHHHHHHHHCTTSC----EEEEECHHHH-----HHTCHHHHHHHHHHHTCCEEEETTSCG-----GG----CHHHHH
T ss_pred HHHHHHHHHHhcCCCCC----EEEEecCcHH-----HHHhHHHHHHHHHHCCCCEEEECCCCH-----HH----HHHHHH
Confidence 555566666655 2211 1345554311 011356677788888888777741111 21 225677
Q ss_pred HHHhcCCceEEEcCCCCCCHHHHHHHHHH
Q 018479 233 LALKSGIEKWGRVPALGCEATFISDLADA 261 (355)
Q Consensus 233 ~a~~~G~~~~~rv~~ln~~p~fi~~La~~ 261 (355)
.++++|+. ....-.++++++.++.+++.
T Consensus 145 ~~~~~gl~-~I~lvap~t~~eri~~i~~~ 172 (271)
T 3nav_A 145 AAEKFGIQ-PIFIAPPTASDETLRAVAQL 172 (271)
T ss_dssp HHHHTTCE-EEEEECTTCCHHHHHHHHHH
T ss_pred HHHHcCCe-EEEEECCCCCHHHHHHHHHH
Confidence 77788875 45555677777666655554
No 43
>3lup_A DEGV family protein; PSI-2, MCSG, structural genomics, fatty acid binding, protei structure initiative; HET: ELA; 2.65A {Streptococcus agalactiae} SCOP: c.119.1.0
Probab=42.87 E-value=27 Score=32.16 Aligned_cols=61 Identities=15% Similarity=0.114 Sum_probs=39.1
Q ss_pred CCCCHH---HHHHHHHHcCCCEEEEeecCccccccchHHHHHHHHHHHHhccccCCceeEEecCCCCChHHH
Q 018479 42 WHPFTE---EAIEQIKRDGITKLVVLPLYPQFSISTSGSSLRLLESIFREDEYLVNMQHTVIPSWYQREGYI 110 (355)
Q Consensus 42 ~~P~i~---~~l~~l~~~G~~~IvvlPlyPqyS~~ttgs~~~~~~e~~~~~~~~~~~~~~~i~~~~~~p~yi 110 (355)
+.|+.. ++++++.++|+++|+++++.-.. +|++... ..+. ..+++.+++++++-...-+.-
T Consensus 65 Sqps~~~~~~~f~~l~~~g~d~ii~i~iSs~L----SGTy~sA-~~a~---~~~~~~~I~ViDS~~~s~g~g 128 (285)
T 3lup_A 65 SQPSLAELDDLLCQLEKEGYTHVLGLFIAAGI----SGFWQNI-QFLI---EEHPNLTIAFPDTKITSAPQG 128 (285)
T ss_dssp CCCCHHHHHHHHHHHHHTTCCEEEECCSCGGG----CTHHHHH-TTHH---HHCTTSEEECCCCCCCHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCCeEEEEeCCCch----hHHHHHH-HHHH---HhCCCCCEEEEcCCchHHHHH
Confidence 688876 55667778899999999996443 3333221 1111 224667889999887665543
No 44
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=42.12 E-value=2.2e+02 Score=26.54 Aligned_cols=94 Identities=20% Similarity=0.220 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHHHHhcccccCCceeEEEEecccCCCCCCCcHHHHHHHH---HhcCCceEEEEcceecccchhhHHHHHH
Q 018479 152 KAEMEECVDLIMEELEKRKITNAYTLAYQSRVGPVEWLKPYTDETIIKL---GQKGVKSLLAVPISFVSEHIETLEEIDV 228 (355)
Q Consensus 152 ~~~~~~ta~~v~e~l~~~~~~~~~~l~fQS~~G~~~Wl~P~~~d~l~~L---~~~G~k~VvVvP~gFvsD~lETl~eid~ 228 (355)
..|-.+..+.+.+..+.+ +.+-... | ..+|.++++.. .+.|++.|+|+||.|..-.-|-+++
T Consensus 86 ~eEr~~vi~~~ve~~~gr-----vpViaGv--g-----~~st~eai~la~~A~~~Gadavlv~~P~Y~~~s~~~l~~--- 150 (332)
T 2r8w_A 86 REERRRAIEAAATILRGR-----RTLMAGI--G-----ALRTDEAVALAKDAEAAGADALLLAPVSYTPLTQEEAYH--- 150 (332)
T ss_dssp HHHHHHHHHHHHHHHTTS-----SEEEEEE--C-----CSSHHHHHHHHHHHHHHTCSEEEECCCCSSCCCHHHHHH---
T ss_pred HHHHHHHHHHHHHHhCCC-----CcEEEec--C-----CCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHH---
Confidence 556666677777765422 3333332 3 57888887653 4469999999998886655555554
Q ss_pred HHHHHHHhcCCceEEE-cC---CCCCCHHHHHHHHH
Q 018479 229 EYKELALKSGIEKWGR-VP---ALGCEATFISDLAD 260 (355)
Q Consensus 229 e~~e~a~~~G~~~~~r-v~---~ln~~p~fi~~La~ 260 (355)
-++++++..++.-+.| +| -.+-+++.+.-|++
T Consensus 151 ~f~~VA~a~~lPiilYn~P~~tg~~l~~e~~~~La~ 186 (332)
T 2r8w_A 151 HFAAVAGATALPLAIYNNPTTTRFTFSDELLVRLAY 186 (332)
T ss_dssp HHHHHHHHCSSCEEEECCHHHHCCCCCHHHHHHHHT
T ss_pred HHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHHHc
Confidence 6678887766653433 23 24567777766653
No 45
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=39.44 E-value=2.2e+02 Score=25.83 Aligned_cols=94 Identities=17% Similarity=0.198 Sum_probs=58.5
Q ss_pred HHHHHHHHHHHHHHhcccccCCceeEEEEecccCCCCCCCcHHHHHHHH---HhcCCceEEEEcceecccchhhHHHHHH
Q 018479 152 KAEMEECVDLIMEELEKRKITNAYTLAYQSRVGPVEWLKPYTDETIIKL---GQKGVKSLLAVPISFVSEHIETLEEIDV 228 (355)
Q Consensus 152 ~~~~~~ta~~v~e~l~~~~~~~~~~l~fQS~~G~~~Wl~P~~~d~l~~L---~~~G~k~VvVvP~gFvsD~lETl~eid~ 228 (355)
..|-.+..+.+.+..+.+ +.+-.. .| ..+|.++++.. .+.|++.++++||.|..-.-|-+++
T Consensus 56 ~~Er~~v~~~~~~~~~gr-----vpviaG--vg-----~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~--- 120 (293)
T 1f6k_A 56 TEEKKEIFRIAKDEAKDQ-----IALIAQ--VG-----SVNLKEAVELGKYATELGYDCLSAVTPFYYKFSFPEIKH--- 120 (293)
T ss_dssp HHHHHHHHHHHHHHHTTS-----SEEEEE--CC-----CSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHH---
T ss_pred HHHHHHHHHHHHHHhCCC-----CeEEEe--cC-----CCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHH---
Confidence 455566667767665422 334332 23 57888887653 4469999999999886655555554
Q ss_pred HHHHHHHhcCCceEEE-cC---CCCCCHHHHHHHHH
Q 018479 229 EYKELALKSGIEKWGR-VP---ALGCEATFISDLAD 260 (355)
Q Consensus 229 e~~e~a~~~G~~~~~r-v~---~ln~~p~fi~~La~ 260 (355)
-++.+++..+..-+.| +| -.+-+++.+.-|++
T Consensus 121 ~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 156 (293)
T 1f6k_A 121 YYDTIIAETGSNMIVYSIPFLTGVNMGIEQFGELYK 156 (293)
T ss_dssp HHHHHHHHHCCCEEEEECHHHHCCCCCHHHHHHHHT
T ss_pred HHHHHHHhCCCCEEEEECccccCcCCCHHHHHHHhc
Confidence 5677777655543333 23 24667777766653
No 46
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=39.21 E-value=1.4e+02 Score=27.22 Aligned_cols=132 Identities=17% Similarity=0.186 Sum_probs=73.3
Q ss_pred cCCCCChHHHHHHHHHHHHHHHhCCCCCceEEEEeeCCCchhhhcccCCchHHHHHHHHHHHHHHhcccccCCceeEEE-
Q 018479 101 PSWYQREGYITAMANLIEKELQNFDSPEQVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRKITNAYTLAY- 179 (355)
Q Consensus 101 ~~~~~~p~yi~a~~~~I~~~l~~~~~~~~~~llfsaHgiP~~~v~~~GDpY~~~~~~ta~~v~e~l~~~~~~~~~~l~f- 179 (355)
+++|-+|.....+++.|.++|.+.+.... ..+- .+.+.|..++.++-+.+++.+... ++.--++|
T Consensus 132 PH~Wldp~~~~~~a~~I~~~L~~~dP~~a-----------~~y~-~N~~~~~~~L~~Ld~~~~~~l~~~--~~~~~v~~H 197 (291)
T 1pq4_A 132 PHIWLSPTLVKRQATTIAKELAELDPDNR-----------DQYE-ANLAAFLAELERLNQELGQILQPL--PQRKFIVFH 197 (291)
T ss_dssp CCGGGCHHHHHHHHHHHHHHHHHHCGGGH-----------HHHH-HHHHHHHHHHHHHHHHHHHHHTTC--SCCEEEESS
T ss_pred CCccCCHHHHHHHHHHHHHHHHHHCcccH-----------HHHH-HHHHHHHHHHHHHHHHHHHHHhCC--CCCEEEEEC
Confidence 56899999999999999999987642111 0111 334557777777777777776421 11111111
Q ss_pred --------------EecccCCCCCCCcHHH---HHHHHHhcCCceEEEEcceecccchhhHHHHHHHHHHHHHhcCCceE
Q 018479 180 --------------QSRVGPVEWLKPYTDE---TIIKLGQKGVKSLLAVPISFVSEHIETLEEIDVEYKELALKSGIEKW 242 (355)
Q Consensus 180 --------------QS~~G~~~Wl~P~~~d---~l~~L~~~G~k~VvVvP~gFvsD~lETl~eid~e~~e~a~~~G~~~~ 242 (355)
-+-.|.. .+|+..+ .++.+.+.+++ +|++-..|-....++| +++.|.. .
T Consensus 198 ~af~Yf~~~yGl~~~~~~~~~--~eps~~~l~~l~~~ik~~~v~-~If~e~~~~~~~~~~i----------a~~~g~~-v 263 (291)
T 1pq4_A 198 PSWAYFARDYNLVQIPIEVEG--QEPSAQELKQLIDTAKENNLT-MVFGETQFSTKSSEAI----------AAEIGAG-V 263 (291)
T ss_dssp CCCHHHHHHTTCEEEESCBTT--BCCCHHHHHHHHHHHHTTTCC-EEEEETTSCCHHHHHH----------HHHHTCE-E
T ss_pred CchHHHHHHCCCEEeecccCC--CCCCHHHHHHHHHHHHHcCCC-EEEEeCCCChHHHHHH----------HHHcCCe-E
Confidence 1111221 3565553 22233445664 4555556766666653 5567876 4
Q ss_pred EEcCCCCCCHHHHHHHHHHH
Q 018479 243 GRVPALGCEATFISDLADAV 262 (355)
Q Consensus 243 ~rv~~ln~~p~fi~~La~~V 262 (355)
..+..++. .++++|...+
T Consensus 264 ~~ld~l~~--~Y~~~m~~n~ 281 (291)
T 1pq4_A 264 ELLDPLAA--DWSSNLKAVA 281 (291)
T ss_dssp EEECTTCS--SHHHHHHHHH
T ss_pred EEEcCchh--hHHHHHHHHH
Confidence 45555554 5666665443
No 47
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=39.09 E-value=2.3e+02 Score=25.92 Aligned_cols=94 Identities=18% Similarity=0.209 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHHHHhcccccCCceeEEEEecccCCCCCCCcHHHHHHHH---HhcCCceEEEEcceecccchhhHHHHHH
Q 018479 152 KAEMEECVDLIMEELEKRKITNAYTLAYQSRVGPVEWLKPYTDETIIKL---GQKGVKSLLAVPISFVSEHIETLEEIDV 228 (355)
Q Consensus 152 ~~~~~~ta~~v~e~l~~~~~~~~~~l~fQS~~G~~~Wl~P~~~d~l~~L---~~~G~k~VvVvP~gFvsD~lETl~eid~ 228 (355)
..|-.+..+.+.+..+.+ +.+-.. .| ..+|.++++.. .+.|++.++++||.|..-.-|-+++
T Consensus 63 ~eEr~~v~~~~~~~~~gr-----vpViaG--vg-----~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~--- 127 (303)
T 2wkj_A 63 LSEREQVLEIVAEEAKGK-----IKLIAH--VG-----CVSTAESQQLAASAKRYGFDAVSAVTPFYYPFSFEEHCD--- 127 (303)
T ss_dssp HHHHHHHHHHHHHHHTTT-----SEEEEE--CC-----CSSHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHH---
T ss_pred HHHHHHHHHHHHHHhCCC-----CcEEEe--cC-----CCCHHHHHHHHHHHHhCCCCEEEecCCCCCCCCHHHHHH---
Confidence 456666667777665422 334333 23 57888887654 4569999999999886555555554
Q ss_pred HHHHHHHhcC-CceEEE-cC---CCCCCHHHHHHHHH
Q 018479 229 EYKELALKSG-IEKWGR-VP---ALGCEATFISDLAD 260 (355)
Q Consensus 229 e~~e~a~~~G-~~~~~r-v~---~ln~~p~fi~~La~ 260 (355)
-++.+++..+ +.-+.| +| -.+-+++.+.-|++
T Consensus 128 ~f~~va~a~~~lPiilYn~P~~tg~~l~~~~~~~La~ 164 (303)
T 2wkj_A 128 HYRAIIDSADGLPMVVYNIPALSGVKLTLDQINTLVT 164 (303)
T ss_dssp HHHHHHHHHTTCCEEEEECHHHHCCCCCHHHHHHHHT
T ss_pred HHHHHHHhCCCCCEEEEeCccccCCCCCHHHHHHHhc
Confidence 5677777655 442333 33 24567777666653
No 48
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=38.47 E-value=2.1e+02 Score=26.08 Aligned_cols=93 Identities=16% Similarity=0.183 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHHHHhcccccCCceeEEEEecccCCCCCCCcHHHHHHHH---HhcCCceEEEEcceecccchhhHHHHHH
Q 018479 152 KAEMEECVDLIMEELEKRKITNAYTLAYQSRVGPVEWLKPYTDETIIKL---GQKGVKSLLAVPISFVSEHIETLEEIDV 228 (355)
Q Consensus 152 ~~~~~~ta~~v~e~l~~~~~~~~~~l~fQS~~G~~~Wl~P~~~d~l~~L---~~~G~k~VvVvP~gFvsD~lETl~eid~ 228 (355)
..|-.+..+.+.+..+.+ +.+-.. .| ..+|.++++.. .+.|++.++++||.|..-.-|-+++
T Consensus 64 ~eEr~~v~~~~~~~~~gr-----vpViaG--vg-----~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~--- 128 (301)
T 1xky_A 64 SEEKVALYRHVVSVVDKR-----VPVIAG--TG-----SNNTHASIDLTKKATEVGVDAVMLVAPYYNKPSQEGMYQ--- 128 (301)
T ss_dssp HHHHHHHHHHHHHHHTTS-----SCEEEE--CC-----CSCHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHH---
T ss_pred HHHHHHHHHHHHHHhCCC-----ceEEeC--CC-----CCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHH---
Confidence 455666667666665422 233332 23 57888887653 4569999999998876655455554
Q ss_pred HHHHHHHhcCCceEEE-cC---CCCCCHHHHHHHH
Q 018479 229 EYKELALKSGIEKWGR-VP---ALGCEATFISDLA 259 (355)
Q Consensus 229 e~~e~a~~~G~~~~~r-v~---~ln~~p~fi~~La 259 (355)
-++++++..++.-+.| +| -.+-+++.+.-|+
T Consensus 129 ~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La 163 (301)
T 1xky_A 129 HFKAIAESTPLPVMLYNVPGRSIVQISVDTVVRLS 163 (301)
T ss_dssp HHHHHHHTCSSCEEEEECHHHHSSCCCHHHHHHHH
T ss_pred HHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHH
Confidence 6778887766553333 33 2456777766665
No 49
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=37.58 E-value=1.9e+02 Score=27.06 Aligned_cols=93 Identities=14% Similarity=0.187 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHHHhcccccCCceeEEEEecccCCCCCCCcHHHHHHHH---HhcCCceEEEEcceecccchhhHHHHHH
Q 018479 152 KAEMEECVDLIMEELEKRKITNAYTLAYQSRVGPVEWLKPYTDETIIKL---GQKGVKSLLAVPISFVSEHIETLEEIDV 228 (355)
Q Consensus 152 ~~~~~~ta~~v~e~l~~~~~~~~~~l~fQS~~G~~~Wl~P~~~d~l~~L---~~~G~k~VvVvP~gFvsD~lETl~eid~ 228 (355)
..|-.+..+.+.+..+.+ +.+-.. .| ..+|.++++.. .+.|++.|+|+||.|..-.-|-+++
T Consensus 83 ~eEr~~vi~~~ve~~~gr-----vpViaG--vg-----~~st~eai~la~~A~~~Gadavlv~~P~Y~~~s~~~l~~--- 147 (343)
T 2v9d_A 83 AEERKAIARFAIDHVDRR-----VPVLIG--TG-----GTNARETIELSQHAQQAGADGIVVINPYYWKVSEANLIR--- 147 (343)
T ss_dssp HHHHHHHHHHHHHHHTTS-----SCEEEE--CC-----SSCHHHHHHHHHHHHHHTCSEEEEECCSSSCCCHHHHHH---
T ss_pred HHHHHHHHHHHHHHhCCC-----CcEEEe--cC-----CCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHH---
Confidence 455666667777665422 333332 23 58888888663 4469999999998876555455554
Q ss_pred HHHHHHHhcCCceEEE-cC---CCCCCHHHHHHHH
Q 018479 229 EYKELALKSGIEKWGR-VP---ALGCEATFISDLA 259 (355)
Q Consensus 229 e~~e~a~~~G~~~~~r-v~---~ln~~p~fi~~La 259 (355)
-++++++..++.-+.| +| -.+-+++.+..|+
T Consensus 148 ~f~~VA~a~~lPiilYn~P~~tg~~l~~e~~~~La 182 (343)
T 2v9d_A 148 YFEQVADSVTLPVMLYNFPALTGQDLTPALVKTLA 182 (343)
T ss_dssp HHHHHHHTCSSCEEEEECHHHHSSCCCHHHHHHHH
T ss_pred HHHHHHHhcCCCEEEEeCchhcCcCCCHHHHHHHH
Confidence 6778887766553333 33 2466777777776
No 50
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=37.48 E-value=17 Score=29.78 Aligned_cols=46 Identities=13% Similarity=-0.067 Sum_probs=32.4
Q ss_pred CCcHHHHHHHHHhcCCceEEEEcceecccchhhHHHHHHHHHHHHHhcCCceEEEcCC
Q 018479 190 KPYTDETIIKLGQKGVKSLLAVPISFVSEHIETLEEIDVEYKELALKSGIEKWGRVPA 247 (355)
Q Consensus 190 ~P~~~d~l~~L~~~G~k~VvVvP~gFvsD~lETl~eid~e~~e~a~~~G~~~~~rv~~ 247 (355)
.+.+.++++++.+.|++.|++.+-++ ..++.+.+++.|+. +.-..|
T Consensus 80 ~~~v~~v~~~~~~~g~~~i~i~~~~~-----------~~~l~~~a~~~Gi~-~igpnc 125 (145)
T 2duw_A 80 SEAAWGVAQEAIAIGAKTLWLQLGVI-----------NEQAAVLAREAGLS-VVMDRC 125 (145)
T ss_dssp STHHHHHHHHHHHHTCCEEECCTTCC-----------CHHHHHHHHTTTCE-EECSCC
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCChH-----------HHHHHHHHHHcCCE-EEcCCe
Confidence 47788899999889999987765222 23677888888874 543344
No 51
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=37.48 E-value=2.4e+02 Score=25.61 Aligned_cols=94 Identities=19% Similarity=0.271 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHHHhcccccCCceeEEEEecccCCCCCCCcHHHHHHHH---HhcCCceEEEEcceecccchhhHHHHHH
Q 018479 152 KAEMEECVDLIMEELEKRKITNAYTLAYQSRVGPVEWLKPYTDETIIKL---GQKGVKSLLAVPISFVSEHIETLEEIDV 228 (355)
Q Consensus 152 ~~~~~~ta~~v~e~l~~~~~~~~~~l~fQS~~G~~~Wl~P~~~d~l~~L---~~~G~k~VvVvP~gFvsD~lETl~eid~ 228 (355)
..|-.+..+.+.+..+.+ +.+-.. .| ..+|.++++.. .+.|++.++++||.|..-+-|-+++
T Consensus 52 ~~Er~~v~~~~~~~~~gr-----~pviaG--vg-----~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~--- 116 (292)
T 2vc6_A 52 KSEHEQVVEITIKTANGR-----VPVIAG--AG-----SNSTAEAIAFVRHAQNAGADGVLIVSPYYNKPTQEGIYQ--- 116 (292)
T ss_dssp HHHHHHHHHHHHHHHTTS-----SCBEEE--CC-----CSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHH---
T ss_pred HHHHHHHHHHHHHHhCCC-----CcEEEe--cC-----CccHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHH---
Confidence 455566667666665422 223322 23 57888887653 4569999999998876544455554
Q ss_pred HHHHHHHhcCCceEEE-cC---CCCCCHHHHHHHHH
Q 018479 229 EYKELALKSGIEKWGR-VP---ALGCEATFISDLAD 260 (355)
Q Consensus 229 e~~e~a~~~G~~~~~r-v~---~ln~~p~fi~~La~ 260 (355)
-++.+++..++.-+.| +| -.+-+++.+..|++
T Consensus 117 ~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 152 (292)
T 2vc6_A 117 HFKAIDAASTIPIIVYNIPGRSAIEIHVETLARIFE 152 (292)
T ss_dssp HHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHH
T ss_pred HHHHHHHhCCCCEEEEeCccccCcCCCHHHHHHHHh
Confidence 5677887766553332 23 25667777776664
No 52
>3rpe_A MDAB, modulator of drug activity B; structural genomics, center for structural genomics of infec diseases, csgid, flavodoxin-like fold; HET: FAD; 1.10A {Yersinia pestis}
Probab=37.32 E-value=1.2e+02 Score=26.70 Aligned_cols=69 Identities=12% Similarity=0.082 Sum_probs=38.0
Q ss_pred hHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCHHHHHHHHHHcCCCEEEEeecCccccccchHHHHHHHHHHH
Q 018479 12 AIISCIQAEELRKSLWEKNLPAKVYVGMRYWHPFTEEAIEQIKRDGITKLVVLPLYPQFSISTSGSSLRLLESIF 86 (355)
Q Consensus 12 ~~~t~~qa~~l~~~L~~~~~~~~V~~amry~~P~i~~~l~~l~~~G~~~IvvlPlyPqyS~~ttgs~~~~~~e~~ 86 (355)
...|+++++.+.+.+.+.|.++.+ -.-+....+.+..+++.+ +|.||+. +|.|-.+..+..+..+++.+
T Consensus 42 ~s~n~~L~~~~~~~l~~~g~ev~~--~dL~~~~Dv~~~~~~l~~--aD~iv~~--~P~y~~~~p~~lK~~iD~v~ 110 (218)
T 3rpe_A 42 GALNLTLTNVAADFLRESGHQVKI--TTVDQGYDIESEIENYLW--ADTIIYQ--MPAWWMGEPWILKKYIDEVF 110 (218)
T ss_dssp SHHHHHHHHHHHHHHHHTTCCEEE--EEGGGCCCHHHHHHHHHH--CSEEEEE--EECBTTBCCHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHhhCCCEEEE--EECCCccCHHHHHHHHHh--CCEEEEE--CChHhccCCHHHHHHHHHHH
Confidence 467888888888888766655433 222334556666666653 4555442 34344444444444444444
No 53
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=36.98 E-value=2.5e+02 Score=25.80 Aligned_cols=92 Identities=13% Similarity=0.047 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHHHhcccccCCceeEEEEecccCCCCCCCcHHHHHHH---HHhcCCceEEEEcceecccchhhHHHHHH
Q 018479 152 KAEMEECVDLIMEELEKRKITNAYTLAYQSRVGPVEWLKPYTDETIIK---LGQKGVKSLLAVPISFVSEHIETLEEIDV 228 (355)
Q Consensus 152 ~~~~~~ta~~v~e~l~~~~~~~~~~l~fQS~~G~~~Wl~P~~~d~l~~---L~~~G~k~VvVvP~gFvsD~lETl~eid~ 228 (355)
..|-.+..+.+.+..+.+ +.+-.. .| . +|.++++. ..+.|++.++++||.|..-.-|-+++
T Consensus 64 ~eEr~~v~~~~v~~~~gr-----vpViaG--vg-----~-~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~--- 127 (316)
T 3e96_A 64 LEEAKEEVRRTVEYVHGR-----ALVVAG--IG-----Y-ATSTAIELGNAAKAAGADAVMIHMPIHPYVTAGGVYA--- 127 (316)
T ss_dssp HHHHHHHHHHHHHHHTTS-----SEEEEE--EC-----S-SHHHHHHHHHHHHHHTCSEEEECCCCCSCCCHHHHHH---
T ss_pred HHHHHHHHHHHHHHhCCC-----CcEEEE--eC-----c-CHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHH---
Confidence 556666777777766422 333322 22 3 67777765 44569999999987765444455554
Q ss_pred HHHHHHHhcCCceEEEcCCCCCCHHHHHHHH
Q 018479 229 EYKELALKSGIEKWGRVPALGCEATFISDLA 259 (355)
Q Consensus 229 e~~e~a~~~G~~~~~rv~~ln~~p~fi~~La 259 (355)
-++++++..++.-+.|---.+-+++.+..|+
T Consensus 128 ~f~~va~a~~lPiilYn~g~~l~~~~~~~La 158 (316)
T 3e96_A 128 YFRDIIEALDFPSLVYFKDPEISDRVLVDLA 158 (316)
T ss_dssp HHHHHHHHHTSCEEEEECCTTSCTHHHHHHT
T ss_pred HHHHHHHhCCCCEEEEeCCCCCCHHHHHHHH
Confidence 5677877766654444324566776665554
No 54
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=36.94 E-value=2.5e+02 Score=25.71 Aligned_cols=93 Identities=18% Similarity=0.239 Sum_probs=58.3
Q ss_pred HHHHHHHHHHHHHHhcccccCCceeEEEEecccCCCCCCCcHHHHHHHH---HhcCCceEEEEcceecccchhhHHHHHH
Q 018479 152 KAEMEECVDLIMEELEKRKITNAYTLAYQSRVGPVEWLKPYTDETIIKL---GQKGVKSLLAVPISFVSEHIETLEEIDV 228 (355)
Q Consensus 152 ~~~~~~ta~~v~e~l~~~~~~~~~~l~fQS~~G~~~Wl~P~~~d~l~~L---~~~G~k~VvVvP~gFvsD~lETl~eid~ 228 (355)
..|-.+..+.+.+..+.+ +.+-.. .| ..+|.++++.. .+.|++.++++||.|..-.-|-+++
T Consensus 64 ~eEr~~vi~~~~~~~~gr-----vpViaG--vg-----~~st~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~--- 128 (306)
T 1o5k_A 64 EDEREKLVSRTLEIVDGK-----IPVIVG--AG-----TNSTEKTLKLVKQAEKLGANGVLVVTPYYNKPTQEGLYQ--- 128 (306)
T ss_dssp HHHHHHHHHHHHHHHTTS-----SCEEEE--CC-----CSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHH---
T ss_pred HHHHHHHHHHHHHHhCCC-----CeEEEc--CC-----CccHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHH---
Confidence 455566666666665422 233332 23 57888887654 4469999999999886655555554
Q ss_pred HHHHHHHhcCCceEEE-cC---CCCCCHHHHHHHH
Q 018479 229 EYKELALKSGIEKWGR-VP---ALGCEATFISDLA 259 (355)
Q Consensus 229 e~~e~a~~~G~~~~~r-v~---~ln~~p~fi~~La 259 (355)
-++++++..++.-+.| +| -.+-+++.+.-|+
T Consensus 129 ~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La 163 (306)
T 1o5k_A 129 HYKYISERTDLGIVVYNVPGRTGVNVLPETAARIA 163 (306)
T ss_dssp HHHHHHTTCSSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred HHHHHHHhCCCCEEEEeCccccCcCCCHHHHHHHH
Confidence 6678887766553333 33 2466777777666
No 55
>3vow_A Probable DNA DC->DU-editing enzyme apobec-3C; antiviral deffense, HOST-virus interaction, metal- HIV-1 VIF, BET, single domain, sivagm, hydrolase; 2.15A {Homo sapiens} PDB: 3vm8_A
Probab=36.20 E-value=23 Score=31.00 Aligned_cols=93 Identities=14% Similarity=0.213 Sum_probs=56.8
Q ss_pred CchhHHHHHHHHHHHHHHhccCCCceEEEe--eecCCCCHHHHHHHHHHcCCCEEEEeecCccccccchHHHHHHHHHHH
Q 018479 9 LSLAIISCIQAEELRKSLWEKNLPAKVYVG--MRYWHPFTEEAIEQIKRDGITKLVVLPLYPQFSISTSGSSLRLLESIF 86 (355)
Q Consensus 9 SPL~~~t~~qa~~l~~~L~~~~~~~~V~~a--mry~~P~i~~~l~~l~~~G~~~IvvlPlyPqyS~~ttgs~~~~~~e~~ 86 (355)
||=....++.++.|++. .++.+.++.| +.++.|...++|+.|.+.|++ |-|--| .+++..-
T Consensus 95 SPC~~CA~~va~FL~~~---~~v~L~If~aRLY~~~~~~~q~gLr~L~~~G~~--v~iM~~------------~eF~~CW 157 (190)
T 3vow_A 95 SPCPDCAGEVAEFLARH---SNVNLTIFTARLYYFQYPCYQEGLRSLSQEGVA--VEIMDY------------EDFKYCW 157 (190)
T ss_dssp CCCHHHHHHHHHHHHHC---TTEEEEEEEEECTTTTSHHHHHHHHHHHHHTCE--EEECCH------------HHHHHHH
T ss_pred CchHHHHHHHHHHHHhC---CCeEEEEEEEecccccCchHHHHHHHHHHCCCc--EEEeCh------------HHHHHHH
Confidence 67777777766666542 3455677777 466889999999999999976 222222 2333333
Q ss_pred HhccccCCceeEEecCCCCChHHHHHHHHHHHHHH
Q 018479 87 REDEYLVNMQHTVIPSWYQREGYITAMANLIEKEL 121 (355)
Q Consensus 87 ~~~~~~~~~~~~~i~~~~~~p~yi~a~~~~I~~~l 121 (355)
+.--...+ .--.||-.=+..-+++..++++.|
T Consensus 158 ~~FVd~~~---~~F~PW~~L~~n~~~l~~~L~~IL 189 (190)
T 3vow_A 158 ENFVYNDN---EPFKPWKGLKTNFRLLKRRLRESL 189 (190)
T ss_dssp HHHBCCTT---CCCCCCTTHHHHHHHHHHHHHHHH
T ss_pred HHhccCCC---CCCCcchhHhHHHHHHHHHHHHHh
Confidence 21111111 113577777777777777777655
No 56
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=35.82 E-value=2.5e+02 Score=25.40 Aligned_cols=93 Identities=18% Similarity=0.248 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHHHHhcccccCCceeEEEEecccCCCCCCCcHHHHHHHH---HhcCCceEEEEcceecccchhhHHHHHH
Q 018479 152 KAEMEECVDLIMEELEKRKITNAYTLAYQSRVGPVEWLKPYTDETIIKL---GQKGVKSLLAVPISFVSEHIETLEEIDV 228 (355)
Q Consensus 152 ~~~~~~ta~~v~e~l~~~~~~~~~~l~fQS~~G~~~Wl~P~~~d~l~~L---~~~G~k~VvVvP~gFvsD~lETl~eid~ 228 (355)
..|-.+..+.+.+..+.+ +.+-.. .| ..+|.++++.. .+.|++.++++||.|..-.-|-+++
T Consensus 52 ~~Er~~v~~~~~~~~~gr-----~pviaG--vg-----~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~--- 116 (289)
T 2yxg_A 52 HEEHKKVIEKVVDVVNGR-----VQVIAG--AG-----SNCTEEAIELSVFAEDVGADAVLSITPYYNKPTQEGLRK--- 116 (289)
T ss_dssp HHHHHHHHHHHHHHHTTS-----SEEEEE--CC-----CSSHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHH---
T ss_pred HHHHHHHHHHHHHHhCCC-----CcEEEe--CC-----CCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHH---
Confidence 455566666666665422 334332 23 57888887653 4469999999999886555555554
Q ss_pred HHHHHHHhcCCceEEE-cC---CCCCCHHHHHHHH
Q 018479 229 EYKELALKSGIEKWGR-VP---ALGCEATFISDLA 259 (355)
Q Consensus 229 e~~e~a~~~G~~~~~r-v~---~ln~~p~fi~~La 259 (355)
-++++++..++.-+.| +| -.+-+++.+..|+
T Consensus 117 ~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La 151 (289)
T 2yxg_A 117 HFGKVAESINLPIVLYNVPSRTAVNLEPKTVKLLA 151 (289)
T ss_dssp HHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred HHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHHH
Confidence 6778887766553333 33 2466777777776
No 57
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=35.74 E-value=17 Score=29.65 Aligned_cols=47 Identities=9% Similarity=-0.045 Sum_probs=31.8
Q ss_pred CcHHHHHHHHHhcCCceEEEEcceecccchhhHHHHHHHHHHHHHhcCCceEEEcCCCC
Q 018479 191 PYTDETIIKLGQKGVKSLLAVPISFVSEHIETLEEIDVEYKELALKSGIEKWGRVPALG 249 (355)
Q Consensus 191 P~~~d~l~~L~~~G~k~VvVvP~gFvsD~lETl~eid~e~~e~a~~~G~~~~~rv~~ln 249 (355)
+.+.++++++.+.|++.+++.+ ||. ..++.+.++++|+. +.--.|++
T Consensus 81 ~~~~~v~~~~~~~gi~~i~~~~-g~~----------~~~~~~~a~~~Gir-~vgpnc~g 127 (140)
T 1iuk_A 81 SALMDHLPEVLALRPGLVWLQS-GIR----------HPEFEKALKEAGIP-VVADRCLM 127 (140)
T ss_dssp HHHTTTHHHHHHHCCSCEEECT-TCC----------CHHHHHHHHHTTCC-EEESCCHH
T ss_pred HHHHHHHHHHHHcCCCEEEEcC-CcC----------HHHHHHHHHHcCCE-EEcCCccc
Confidence 4566678888888999876554 553 14677888899985 55444443
No 58
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=35.62 E-value=2.5e+02 Score=25.40 Aligned_cols=94 Identities=19% Similarity=0.216 Sum_probs=58.3
Q ss_pred HHHHHHHHHHHHHHhcccccCCceeEEEEecccCCCCCCCcHHHHHHHHH---hcCCceEEEEcceecccchhhHHHHHH
Q 018479 152 KAEMEECVDLIMEELEKRKITNAYTLAYQSRVGPVEWLKPYTDETIIKLG---QKGVKSLLAVPISFVSEHIETLEEIDV 228 (355)
Q Consensus 152 ~~~~~~ta~~v~e~l~~~~~~~~~~l~fQS~~G~~~Wl~P~~~d~l~~L~---~~G~k~VvVvP~gFvsD~lETl~eid~ 228 (355)
..|-.+..+.+.+..+.+ +.+-.. .| ..+|.++++... +.|++.++++||.|..-+-|-+++
T Consensus 53 ~~Er~~v~~~~~~~~~gr-----~pviaG--vg-----~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~--- 117 (292)
T 2ojp_A 53 HDEHADVVMMTLDLADGR-----IPVIAG--TG-----ANATAEAISLTQRFNDSGIVGCLTVTPYYNRPSQEGLYQ--- 117 (292)
T ss_dssp HHHHHHHHHHHHHHHTTS-----SCEEEE--CC-----CSSHHHHHHHHHHTTTSSCSEEEEECCCSSCCCHHHHHH---
T ss_pred HHHHHHHHHHHHHHhCCC-----CcEEEe--cC-----CccHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHH---
Confidence 455566666666665422 233332 23 578888887643 459999999999886555555554
Q ss_pred HHHHHHHhcCCceEEE-cC---CCCCCHHHHHHHHH
Q 018479 229 EYKELALKSGIEKWGR-VP---ALGCEATFISDLAD 260 (355)
Q Consensus 229 e~~e~a~~~G~~~~~r-v~---~ln~~p~fi~~La~ 260 (355)
-++.+++..+..-+.| +| -.+-+++.+.-|++
T Consensus 118 ~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 153 (292)
T 2ojp_A 118 HFKAIAEHTDLPQILYNVPSRTGCDLLPETVGRLAK 153 (292)
T ss_dssp HHHHHHTTCSSCEEEECCHHHHSCCCCHHHHHHHHT
T ss_pred HHHHHHHhcCCCEEEEeCcchhccCCCHHHHHHHHc
Confidence 6778887766653333 22 24567777766653
No 59
>3mxo_A Serine/threonine-protein phosphatase PGAM5, mitoc; phosphoglycerate mutase family member 5, BXLBV68, MGC protein, structural genomics consortium; HET: PG4 PGE PEG; 1.70A {Homo sapiens} PDB: 3o0t_A
Probab=35.18 E-value=1.4e+02 Score=24.98 Aligned_cols=112 Identities=20% Similarity=0.153 Sum_probs=57.4
Q ss_pred CCchhHHHHHHHHHHHHHHhccCCCceEEEeeecCCCCHH--HHHHHHHHc-CCCEEEEeecCccccccchHHHHHHHHH
Q 018479 8 VLSLAIISCIQAEELRKSLWEKNLPAKVYVGMRYWHPFTE--EAIEQIKRD-GITKLVVLPLYPQFSISTSGSSLRLLES 84 (355)
Q Consensus 8 gSPL~~~t~~qa~~l~~~L~~~~~~~~V~~amry~~P~i~--~~l~~l~~~-G~~~IvvlPlyPqyS~~ttgs~~~~~~e 84 (355)
-+||.+.-++||+.+.+.|...+..+. .=|+.|... ++.+.+.+. +--.+.+.|.+= . |.. +.+
T Consensus 30 D~pLt~~G~~qA~~l~~~l~~~~~~~~----~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~L~---E---g~~---~~~ 96 (202)
T 3mxo_A 30 DRTLTPLGREQAELTGLRLASLGLKFN----KIVHSSMTRAIETTDIISRHLPGVCKVSTDLLR---E---GAP---IEP 96 (202)
T ss_dssp GCCBCHHHHHHHHHHHHHHHTTCCCCS----EEEEESSHHHHHHHHHHHHTSTTCCEEEEGGGC---C---CCC------
T ss_pred CCCcCHHHHHHHHHHHHHHHhcCCCCC----EEEECChHHHHHHHHHHHHhCCCCCeeeCcccc---c---CCc---cCC
Confidence 479999999999999999986543332 234677765 555555442 122344444431 1 100 000
Q ss_pred HHHhccccCCceeEEecCCCCChHHHHHHHHHHHHHHHhCCC------CCceEEEEeeCCCchhhh
Q 018479 85 IFREDEYLVNMQHTVIPSWYQREGYITAMANLIEKELQNFDS------PEQVMIFFSAHGVPLAYV 144 (355)
Q Consensus 85 ~~~~~~~~~~~~~~~i~~~~~~p~yi~a~~~~I~~~l~~~~~------~~~~~llfsaHgiP~~~v 144 (355)
. +. ...|...+.-.....+|+.+++.+.-. .++-.+|++.||-+++.+
T Consensus 97 ~-------~~-----~~~w~~~~es~~~~~~R~~~~~~~~~~~~~~~~~~~~~vlvVsHg~~ir~l 150 (202)
T 3mxo_A 97 D-------PP-----VSHWKPEAVQYYEDGARIEAAFRNYIHRADARQEEDSYEIFICHANVIRYI 150 (202)
T ss_dssp -----------------------CTHHHHHHHHHHHHHHHTTCCCTTCCSCEEEEEEECHHHHHHH
T ss_pred C-------Cc-----HHhhccCCcccccHHHHHHHHHHHHHHhhhhccCCCceEEEEeCHHHHHHH
Confidence 0 00 122322222224456677776654321 123468888999877654
No 60
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=35.06 E-value=2.7e+02 Score=25.63 Aligned_cols=94 Identities=12% Similarity=0.266 Sum_probs=57.0
Q ss_pred HHHHHHHHHHHHHHhcccccCCceeEEEEecccCCCCCCCcHHHHHHHH---HhcCCceEEEEcceecc--cchhhHHHH
Q 018479 152 KAEMEECVDLIMEELEKRKITNAYTLAYQSRVGPVEWLKPYTDETIIKL---GQKGVKSLLAVPISFVS--EHIETLEEI 226 (355)
Q Consensus 152 ~~~~~~ta~~v~e~l~~~~~~~~~~l~fQS~~G~~~Wl~P~~~d~l~~L---~~~G~k~VvVvP~gFvs--D~lETl~ei 226 (355)
..|-.+..+.+.+..+.+ +.+-.. .| ..+|.++++.. .+.|++.++++||.|.. -.-|-+++
T Consensus 63 ~~Er~~v~~~~~~~~~gr-----vpviaG--vg-----~~~t~~ai~la~~a~~~Gadavlv~~P~y~~kp~~~~~l~~- 129 (318)
T 3qfe_A 63 REERAQLIATARKAVGPD-----FPIMAG--VG-----AHSTRQVLEHINDASVAGANYVLVLPPAYFGKATTPPVIKS- 129 (318)
T ss_dssp HHHHHHHHHHHHHHHCTT-----SCEEEE--CC-----CSSHHHHHHHHHHHHHHTCSEEEECCCCC---CCCHHHHHH-
T ss_pred HHHHHHHHHHHHHHhCCC-----CcEEEe--CC-----CCCHHHHHHHHHHHHHcCCCEEEEeCCcccCCCCCHHHHHH-
Confidence 556666777777766432 333333 23 57888888753 45699999999997654 23454554
Q ss_pred HHHHHHHHHhcCCceEE-EcCC----CCCCHHHHHHHHH
Q 018479 227 DVEYKELALKSGIEKWG-RVPA----LGCEATFISDLAD 260 (355)
Q Consensus 227 d~e~~e~a~~~G~~~~~-rv~~----ln~~p~fi~~La~ 260 (355)
-++.+++..++.-+. -+|. .+-+++.+..|++
T Consensus 130 --~f~~ia~a~~lPiilYn~P~~t~g~~l~~~~~~~La~ 166 (318)
T 3qfe_A 130 --FFDDVSCQSPLPVVIYNFPGVCNGIDLDSDMITTIAR 166 (318)
T ss_dssp --HHHHHHHHCSSCEEEEECCC----CCCCHHHHHHHHH
T ss_pred --HHHHHHhhCCCCEEEEeCCcccCCCCCCHHHHHHHHh
Confidence 567787766655322 3332 4557777776665
No 61
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=34.69 E-value=2.5e+02 Score=25.78 Aligned_cols=91 Identities=15% Similarity=0.055 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHHHhcccccCCceeEEEEecccCCCCCCCcHHHHHHHH---HhcCCceEEEEcceecccchhhHHHHHH
Q 018479 152 KAEMEECVDLIMEELEKRKITNAYTLAYQSRVGPVEWLKPYTDETIIKL---GQKGVKSLLAVPISFVSEHIETLEEIDV 228 (355)
Q Consensus 152 ~~~~~~ta~~v~e~l~~~~~~~~~~l~fQS~~G~~~Wl~P~~~d~l~~L---~~~G~k~VvVvP~gFvsD~lETl~eid~ 228 (355)
..|-.+..+.+.+..+.+ +.+-.. .| . +|.++++.. .+.|++.++++||.|..-.-|-+++
T Consensus 64 ~eEr~~vi~~~~~~~~gr-----vpViaG--vg-----~-st~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~--- 127 (314)
T 3d0c_A 64 IEEAKQVATRVTELVNGR-----ATVVAG--IG-----Y-SVDTAIELGKSAIDSGADCVMIHQPVHPYITDAGAVE--- 127 (314)
T ss_dssp HHHHHHHHHHHHHHHTTS-----SEEEEE--EC-----S-SHHHHHHHHHHHHHTTCSEEEECCCCCSCCCHHHHHH---
T ss_pred HHHHHHHHHHHHHHhCCC-----CeEEec--CC-----c-CHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHH---
Confidence 455566666666665422 334333 23 5 787777653 4569999999998876555555554
Q ss_pred HHHHHHHhcCCceEEEc-CCCCCCHHHHHHHH
Q 018479 229 EYKELALKSGIEKWGRV-PALGCEATFISDLA 259 (355)
Q Consensus 229 e~~e~a~~~G~~~~~rv-~~ln~~p~fi~~La 259 (355)
-++.+++..++.-+.|= --. -+++.+..|+
T Consensus 128 ~f~~va~a~~lPiilYn~tg~-l~~~~~~~La 158 (314)
T 3d0c_A 128 YYRNIIEALDAPSIIYFKDAH-LSDDVIKELA 158 (314)
T ss_dssp HHHHHHHHSSSCEEEEECCTT-SCTHHHHHHT
T ss_pred HHHHHHHhCCCCEEEEeCCCC-cCHHHHHHHH
Confidence 66778877665533332 112 5666665554
No 62
>2hl0_A Threonyl-tRNA synthetase; translation, editing, aminoacyl-tRNA synthetase, enzyme mechanism, enantioselectivity, ligase; HET: A3S; 1.86A {Pyrococcus abyssi} PDB: 2hkz_A 1y2q_A* 2hl2_A* 3pd2_A* 2hl1_A* 3pd3_A* 3pd4_A* 3pd5_A*
Probab=34.46 E-value=1.1e+02 Score=25.46 Aligned_cols=20 Identities=15% Similarity=0.366 Sum_probs=15.3
Q ss_pred hcCCceEEEEcceecccchh
Q 018479 202 QKGVKSLLAVPISFVSEHIE 221 (355)
Q Consensus 202 ~~G~k~VvVvP~gFvsD~lE 221 (355)
+-|+++|++.|++=+|+.+.
T Consensus 70 kv~~~~ivlYPyAHLSs~La 89 (143)
T 2hl0_A 70 QVKAENVFVYPFAHLSSELA 89 (143)
T ss_dssp HHTCCEEEEEECGGGCSSBC
T ss_pred hcCCCEEEEeccccccCccC
Confidence 34788888899887777763
No 63
>1tz9_A Mannonate dehydratase; alpha-beta protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium; 2.90A {Enterococcus faecalis} SCOP: c.1.15.6
Probab=33.62 E-value=71 Score=29.88 Aligned_cols=65 Identities=12% Similarity=0.229 Sum_probs=40.1
Q ss_pred CCCCCC-cHHHHHHHHHhc-CCceEEEEcceecccchhhHHHHHHHHHHHHHhcCCceEEEcCCCCCCH
Q 018479 186 VEWLKP-YTDETIIKLGQK-GVKSLLAVPISFVSEHIETLEEIDVEYKELALKSGIEKWGRVPALGCEA 252 (355)
Q Consensus 186 ~~Wl~P-~~~d~l~~L~~~-G~k~VvVvP~gFvsD~lETl~eid~e~~e~a~~~G~~~~~rv~~ln~~p 252 (355)
..|.+| +....|+.+++. |++.|.+.....-.+..-+..++ .+.++.+++.|+. +.-+..++.++
T Consensus 15 ~~~~g~~~~~~~L~~i~~~~G~~~ve~~~~~~~~g~~~~~~~~-~~~~~~l~~~GL~-i~~~~~~~~~~ 81 (367)
T 1tz9_A 15 FRWYGAAGDAIPLKHIRQIPGITGVVGTLLNKLPGDVWTVAEI-QALKQSVEQEGLA-LLGIESVAIHD 81 (367)
T ss_dssp CBCCCTTTCCSCHHHHTTSTTCCEEEECCSSSCTTCCCCHHHH-HHHHHHHHHTTCE-EEEECSCCCCH
T ss_pred eeecCCCCChHHHHHHhhcCCCCeEEecCCCCCCCCCCCHHHH-HHHHHHHHHCCCe-EEEEecCCCcH
Confidence 457788 778889999999 99999874321000011111222 2467778889986 55555566554
No 64
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=33.44 E-value=2.7e+02 Score=25.15 Aligned_cols=93 Identities=22% Similarity=0.188 Sum_probs=58.2
Q ss_pred HHHHHHHHHHHHHHhcccccCCceeEEEEecccCCCCCCCcHHHHHHH---HHhcCCceEEEEcceecccchhhHHHHHH
Q 018479 152 KAEMEECVDLIMEELEKRKITNAYTLAYQSRVGPVEWLKPYTDETIIK---LGQKGVKSLLAVPISFVSEHIETLEEIDV 228 (355)
Q Consensus 152 ~~~~~~ta~~v~e~l~~~~~~~~~~l~fQS~~G~~~Wl~P~~~d~l~~---L~~~G~k~VvVvP~gFvsD~lETl~eid~ 228 (355)
..|-.+..+.+.+..+.+ +.+-.. .| ..+|.++++. ..+.|++.++++||.|..-.-|-+++
T Consensus 53 ~~Er~~v~~~~~~~~~gr-----~pviaG--vg-----~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~--- 117 (291)
T 3tak_A 53 MEEHTQVIKEIIRVANKR-----IPIIAG--TG-----ANSTREAIELTKAAKDLGADAALLVTPYYNKPTQEGLYQ--- 117 (291)
T ss_dssp HHHHHHHHHHHHHHHTTS-----SCEEEE--CC-----CSSHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHH---
T ss_pred HHHHHHHHHHHHHHhCCC-----CeEEEe--CC-----CCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHH---
Confidence 556666777777776432 233332 23 5788888875 44569999999998876554455554
Q ss_pred HHHHHHHhcCCceEEE-cC---CCCCCHHHHHHHH
Q 018479 229 EYKELALKSGIEKWGR-VP---ALGCEATFISDLA 259 (355)
Q Consensus 229 e~~e~a~~~G~~~~~r-v~---~ln~~p~fi~~La 259 (355)
-++++++..++.-+.| +| -.+-+++.+..|+
T Consensus 118 ~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La 152 (291)
T 3tak_A 118 HYKAIAEAVELPLILYNVPGRTGVDLSNDTAVRLA 152 (291)
T ss_dssp HHHHHHHHCCSCEEEEECHHHHSCCCCHHHHHHHT
T ss_pred HHHHHHHhcCCCEEEEecccccCCCCCHHHHHHHH
Confidence 6778887766653333 22 2466676665554
No 65
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=33.15 E-value=2.8e+02 Score=25.14 Aligned_cols=93 Identities=18% Similarity=0.189 Sum_probs=58.5
Q ss_pred HHHHHHHHHHHHHHhcccccCCceeEEEEecccCCCCCCCcHHHHHHHH---HhcCCceEEEEcceecccchhhHHHHHH
Q 018479 152 KAEMEECVDLIMEELEKRKITNAYTLAYQSRVGPVEWLKPYTDETIIKL---GQKGVKSLLAVPISFVSEHIETLEEIDV 228 (355)
Q Consensus 152 ~~~~~~ta~~v~e~l~~~~~~~~~~l~fQS~~G~~~Wl~P~~~d~l~~L---~~~G~k~VvVvP~gFvsD~lETl~eid~ 228 (355)
..|-.+..+.+.+..+.+ +.+-.. .| ..+|.++++.. .+.|++.++++||.|..-+-|-+++
T Consensus 52 ~~Er~~v~~~~~~~~~gr-----vpviaG--vg-----~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~--- 116 (294)
T 2ehh_A 52 FEEHEKVIEFAVKRAAGR-----IKVIAG--TG-----GNATHEAVHLTAHAKEVGADGALVVVPYYNKPTQRGLYE--- 116 (294)
T ss_dssp HHHHHHHHHHHHHHHTTS-----SEEEEE--CC-----CSCHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHH---
T ss_pred HHHHHHHHHHHHHHhCCC-----CcEEEe--cC-----CCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHH---
Confidence 455566666666665422 334332 23 57888887654 4569999999998876554455554
Q ss_pred HHHHHHHhcCCceEEE-cC---CCCCCHHHHHHHH
Q 018479 229 EYKELALKSGIEKWGR-VP---ALGCEATFISDLA 259 (355)
Q Consensus 229 e~~e~a~~~G~~~~~r-v~---~ln~~p~fi~~La 259 (355)
-++++++..+..-+.| +| -.+-+++.+..|+
T Consensus 117 ~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La 151 (294)
T 2ehh_A 117 HFKTVAQEVDIPIIIYNIPSRTCVEISVDTMFKLA 151 (294)
T ss_dssp HHHHHHHHCCSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred HHHHHHHhcCCCEEEEeCCcccCcCCCHHHHHHHH
Confidence 6677887766553333 33 2466788777776
No 66
>3v4k_A DNA DC->DU-editing enzyme apobec-3G; antiviral defense, HOST-virus interaction, hydrola metal-binding, nucleus; HET: DNA; 1.38A {Homo sapiens} PDB: 3v4j_A* 3ir2_A* 2kem_A* 2jyw_A* 2kbo_A* 3e1u_A* 3iqs_A*
Probab=32.95 E-value=54 Score=28.93 Aligned_cols=93 Identities=9% Similarity=0.050 Sum_probs=55.3
Q ss_pred CchhHHHHHHHHHHHHHHhccCCCceEEEe-eecCCCCHHHHHHHHHHcCCCEEEEeecCccccccchHHHHHHHHHHHH
Q 018479 9 LSLAIISCIQAEELRKSLWEKNLPAKVYVG-MRYWHPFTEEAIEQIKRDGITKLVVLPLYPQFSISTSGSSLRLLESIFR 87 (355)
Q Consensus 9 SPL~~~t~~qa~~l~~~L~~~~~~~~V~~a-mry~~P~i~~~l~~l~~~G~~~IvvlPlyPqyS~~ttgs~~~~~~e~~~ 87 (355)
||=.+-.++.++.|++. .++.+.+++| .-|..|...++|+.|.+.|++ |-| | +. .++....+
T Consensus 109 SPC~~CA~~v~~FL~~~---~~v~L~If~aRLY~~~~~~~~gLr~L~~aG~~--v~i-M-------~~----~ef~~CW~ 171 (203)
T 3v4k_A 109 SPCFSCAQEMAKFISKN---KHVSLCIKTARIYDDQGRCQEGLRTLAEAGAK--ISI-M-------TY----SEFKHCWD 171 (203)
T ss_pred CChHHHHHHHHHHHhhC---CCeEEEEEEEeecccCchHHHHHHHHHHCCCe--EEe-c-------CH----HHHHHHHH
Confidence 67777666666655443 3566778877 444599999999999999976 222 3 11 12222222
Q ss_pred hccccCCceeEEecCCCCChHHHHHHHHHHHHHH
Q 018479 88 EDEYLVNMQHTVIPSWYQREGYITAMANLIEKEL 121 (355)
Q Consensus 88 ~~~~~~~~~~~~i~~~~~~p~yi~a~~~~I~~~l 121 (355)
.--...+ .--.||.+=+...+.+..++++.|
T Consensus 172 ~FV~nqg---~pF~PW~~L~en~~~l~~~L~~IL 202 (203)
T 3v4k_A 172 TFVDHQG---APFQPWDGLDEHSQDLSGRLRAIL 202 (203)
T ss_pred HHccCCC---CCCCchhHHHHHHHHHHHHHHHHh
Confidence 1000011 123467777777778877776654
No 67
>3jr7_A Uncharacterized EGV family protein COG1307; structural genomics, PSI2, MCSG, protein struct initiative; HET: PG6; 2.00A {Ruminococcus gnavus}
Probab=32.51 E-value=99 Score=28.51 Aligned_cols=64 Identities=22% Similarity=0.139 Sum_probs=42.9
Q ss_pred CCCCHHHHHHHHHHcCCCEEEEeecCccccccchHHHHHHHHHHHHhccccCCceeEEecCCCCChHHH
Q 018479 42 WHPFTEEAIEQIKRDGITKLVVLPLYPQFSISTSGSSLRLLESIFREDEYLVNMQHTVIPSWYQREGYI 110 (355)
Q Consensus 42 ~~P~i~~~l~~l~~~G~~~IvvlPlyPqyS~~ttgs~~~~~~e~~~~~~~~~~~~~~~i~~~~~~p~yi 110 (355)
+.|+..+-.+... .|.++|+++++.-..|. |..+.....+.+. ..+|+.+++++++-...-+.-
T Consensus 81 Sqps~~~~~~~f~-~~~~~Ii~i~iSs~LSG--Ty~sA~~Aa~~~~--e~~~~~~I~ViDS~~~s~g~g 144 (298)
T 3jr7_A 81 SCPSPERYMESYH-CDAERIYVVTLSAELSG--SYNSAVLGKNLYE--EEYGEKQIHVFNSRSASVGET 144 (298)
T ss_dssp ECCCHHHHHHHHC-SSCSEEEEEESCTTTCS--HHHHHHHHHHHHH--HHHCCCEEEEEECSSCTHHHH
T ss_pred CCCCHHHHHHHHH-hcCCeEEEEECCcchhH--HHHHHHHHHHHHH--hhCCCCeEEEECCCchhHHHH
Confidence 6899999877776 48899999999754332 2222333333332 124667899999988776654
No 68
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=32.49 E-value=2.1e+02 Score=26.08 Aligned_cols=94 Identities=19% Similarity=0.212 Sum_probs=58.3
Q ss_pred HHHHHHHHHHHHHHhcccccCCceeEEEEecccCCCCCCCcHHHHHHHH---HhcCCceEEEEcceecccchhhHHHHHH
Q 018479 152 KAEMEECVDLIMEELEKRKITNAYTLAYQSRVGPVEWLKPYTDETIIKL---GQKGVKSLLAVPISFVSEHIETLEEIDV 228 (355)
Q Consensus 152 ~~~~~~ta~~v~e~l~~~~~~~~~~l~fQS~~G~~~Wl~P~~~d~l~~L---~~~G~k~VvVvP~gFvsD~lETl~eid~ 228 (355)
..|-.+..+.+.+..+.+ +.+-.. .| ..+|.++++.. .+.|++.++++||.|..-.-|-+++
T Consensus 52 ~~Er~~v~~~~~~~~~gr-----vpviaG--vg-----~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~--- 116 (297)
T 2rfg_A 52 EEEHKRVVALVAEQAQGR-----VPVIAG--AG-----SNNPVEAVRYAQHAQQAGADAVLCVAGYYNRPSQEGLYQ--- 116 (297)
T ss_dssp HHHHHHHHHHHHHHHTTS-----SCBEEE--CC-----CSSHHHHHHHHHHHHHHTCSEEEECCCTTTCCCHHHHHH---
T ss_pred HHHHHHHHHHHHHHhCCC-----CeEEEc--cC-----CCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHH---
Confidence 455566666666665422 223322 23 57888887653 4469999999998876555555554
Q ss_pred HHHHHHHhcCCceEEE-cC---CCCCCHHHHHHHHH
Q 018479 229 EYKELALKSGIEKWGR-VP---ALGCEATFISDLAD 260 (355)
Q Consensus 229 e~~e~a~~~G~~~~~r-v~---~ln~~p~fi~~La~ 260 (355)
-++.+++..++.-+.| +| -.+-+++.+..|++
T Consensus 117 ~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 152 (297)
T 2rfg_A 117 HFKMVHDAIDIPIIVYNIPPRAVVDIKPETMARLAA 152 (297)
T ss_dssp HHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHT
T ss_pred HHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHHc
Confidence 6677887766553333 33 24667777776664
No 69
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=32.04 E-value=3e+02 Score=25.20 Aligned_cols=94 Identities=17% Similarity=0.179 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHHHhcccccCCceeEEEEecccCCCCCCCcHHHHHHH---HHhcCCceEEEEccee---cccchhhHHH
Q 018479 152 KAEMEECVDLIMEELEKRKITNAYTLAYQSRVGPVEWLKPYTDETIIK---LGQKGVKSLLAVPISF---VSEHIETLEE 225 (355)
Q Consensus 152 ~~~~~~ta~~v~e~l~~~~~~~~~~l~fQS~~G~~~Wl~P~~~d~l~~---L~~~G~k~VvVvP~gF---vsD~lETl~e 225 (355)
..|-.+..+.+.+..+.+ +.+-... | ..+|.++++. ..+.|++.++++||.| ..=.-|-+++
T Consensus 60 ~~Er~~v~~~~~~~~~gr-----vpviaGv--g-----~~~t~~ai~la~~A~~~Gadavlv~~Pyy~~~~~~s~~~l~~ 127 (309)
T 3fkr_A 60 DDERDVLTRTILEHVAGR-----VPVIVTT--S-----HYSTQVCAARSLRAQQLGAAMVMAMPPYHGATFRVPEAQIFE 127 (309)
T ss_dssp HHHHHHHHHHHHHHHTTS-----SCEEEEC--C-----CSSHHHHHHHHHHHHHTTCSEEEECCSCBTTTBCCCHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCC-----CcEEEec--C-----CchHHHHHHHHHHHHHcCCCEEEEcCCCCccCCCCCHHHHHH
Confidence 556666677777765322 3333332 2 5788888775 4456999999998876 3334454554
Q ss_pred HHHHHHHHHHhcCCceEEE-cC--CCCCCHHHHHHHHH
Q 018479 226 IDVEYKELALKSGIEKWGR-VP--ALGCEATFISDLAD 260 (355)
Q Consensus 226 id~e~~e~a~~~G~~~~~r-v~--~ln~~p~fi~~La~ 260 (355)
-++.+++..++.-+.| +| -.+-+++.+..|++
T Consensus 128 ---~f~~va~a~~lPiilYn~P~tg~~l~~~~~~~La~ 162 (309)
T 3fkr_A 128 ---FYARVSDAIAIPIMVQDAPASGTALSAPFLARMAR 162 (309)
T ss_dssp ---HHHHHHHHCSSCEEEEECGGGCCCCCHHHHHHHHH
T ss_pred ---HHHHHHHhcCCCEEEEeCCCCCCCCCHHHHHHHHh
Confidence 5678887766653333 33 34566766666654
No 70
>3nyi_A FAT acid-binding protein; stearic acid, DEGV family protein, structural genomics, PSI- protein structure initiative; HET: STE; 1.90A {Eubacterium ventriosum} SCOP: c.119.1.0
Probab=31.50 E-value=55 Score=30.25 Aligned_cols=64 Identities=20% Similarity=0.097 Sum_probs=40.9
Q ss_pred CCCCHH---HHHHHHHHcCCCEEEEeecCccccccchHHHHHHHHHHHHhccccCCceeEEecCCCCChHHH
Q 018479 42 WHPFTE---EAIEQIKRDGITKLVVLPLYPQFSISTSGSSLRLLESIFREDEYLVNMQHTVIPSWYQREGYI 110 (355)
Q Consensus 42 ~~P~i~---~~l~~l~~~G~~~IvvlPlyPqyS~~ttgs~~~~~~e~~~~~~~~~~~~~~~i~~~~~~p~yi 110 (355)
+.|+.. ++++++.++| ++|+++++.-..|. |..+.....+.+. ..+|+.+++++++-...-+.-
T Consensus 66 Sqps~~~~~~~f~~l~~~g-~~ii~i~iSs~LSG--Ty~sA~~aa~~~~--e~~~~~~I~ViDS~~~s~g~g 132 (297)
T 3nyi_A 66 SLPSVESYADVFRSFVEQG-FPVVCFTITTLFSG--SYNSAINAKSLVL--EDYPDANICVIDSKQNTVTQA 132 (297)
T ss_dssp ECCCHHHHHHHHHHHHTTT-CCEEEEESCTTTCS--HHHHHHHHHHHHH--HHCTTCCEEEEECSCCHHHHH
T ss_pred cCCCHHHHHHHHHHHHHCC-CeEEEEECCCcHhH--HHHHHHHHHHHHH--hhCCCCeEEEEeCCchHHHHH
Confidence 688876 5666777788 99999999754332 2233333333332 235667899999987665543
No 71
>3pl5_A SMU_165, putative uncharacterized protein; fatty acid binding protein, lipid binding protein; HET: PLM; 2.04A {Streptococcus mutans}
Probab=31.03 E-value=65 Score=30.19 Aligned_cols=63 Identities=11% Similarity=0.064 Sum_probs=40.1
Q ss_pred CCCCHH---HHHHHHHHcCCCEEEEeecCccccccchHHHHHHHHHHHHhccccCCceeEEecCCCCChHH
Q 018479 42 WHPFTE---EAIEQIKRDGITKLVVLPLYPQFSISTSGSSLRLLESIFREDEYLVNMQHTVIPSWYQREGY 109 (355)
Q Consensus 42 ~~P~i~---~~l~~l~~~G~~~IvvlPlyPqyS~~ttgs~~~~~~e~~~~~~~~~~~~~~~i~~~~~~p~y 109 (355)
+.|++. ++++++.++| ++|++|++.-..|. |..+.....+.+.+ .+|+.++.++++-...-+.
T Consensus 97 SqPs~~~~~~~f~~l~~~g-~~Ii~I~iSS~LSG--Ty~sA~~Aa~~~~e--~~~~~~I~ViDS~~~s~g~ 162 (320)
T 3pl5_A 97 SQVNVGQFESYFRQSAENG-QEVLYIAFSSVLSG--TYQSAVMARDIVLE--EYPQASIEIVDTLAATGGE 162 (320)
T ss_dssp ECCCHHHHHHHHHHHHHTT-CCEEEEECCTTTCT--HHHHHHHHHHHHHH--HCTTCCEEEEECCCCHHHH
T ss_pred CCCCHHHHHHHHHHHHHCC-CeEEEEecCchHhH--HHHHHHHHHHHHHh--hCCCCeEEEEcCCchHHHH
Confidence 678876 5566777788 89999999654332 22223333333322 3577789999998766554
No 72
>3fdj_A DEGV family protein; GUT microbiome, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE P6G PG4; 1.80A {Eubacterium eligens} SCOP: c.119.1.0
Probab=30.23 E-value=1.7e+02 Score=26.48 Aligned_cols=63 Identities=14% Similarity=0.029 Sum_probs=42.5
Q ss_pred CCCCHHHHHHHHHHcCCCEEEEeecCccccccchHHHHHHHHHHHHhccccCCceeEEecCCCCChHHH
Q 018479 42 WHPFTEEAIEQIKRDGITKLVVLPLYPQFSISTSGSSLRLLESIFREDEYLVNMQHTVIPSWYQREGYI 110 (355)
Q Consensus 42 ~~P~i~~~l~~l~~~G~~~IvvlPlyPqyS~~ttgs~~~~~~e~~~~~~~~~~~~~~~i~~~~~~p~yi 110 (355)
+.|+..+-.+... |+++|+.+++.-..|. |..+.....+.+. ..+|+.+++++++-....++-
T Consensus 61 Sqps~~~~~~~f~--~~~~ii~i~iSs~LSG--Ty~sA~~aa~~~~--ee~~~~~I~ViDS~~~s~g~g 123 (278)
T 3fdj_A 61 ACPGIDAWLEAFG--DDDEIFVVTITAGMSG--TYNSAMAARAVYL--EEHPQAKVRVIDSKSTGPQMR 123 (278)
T ss_dssp ECCCHHHHHHHHT--TCSEEEEEESCTTTCS--HHHHHHHHHHHHH--TTCTTCEEEEEECSSCTHHHH
T ss_pred cCCCHHHHHHHHh--cCCcEEEEECCCcHhH--HHHHHHHHHHHHH--hhCCCCeEEEEcCCchhHHHH
Confidence 6899998777774 7899999999654332 2233333333332 235777899999988876653
No 73
>3dnf_A ISPH, LYTB, 4-hydroxy-3-methylbut-2-ENYL diphosphate reductas; trilobal strucure, open alpha/beta, iron, iron-sulfur, isopr biosynthesis; 1.65A {Aquifex aeolicus}
Probab=30.19 E-value=93 Score=29.00 Aligned_cols=69 Identities=19% Similarity=0.214 Sum_probs=39.4
Q ss_pred eeEEecCCCCChHHHHHHHHHHHHHHHhCCCCCceEEEEeeCCCchhhhc---ccC-------CchHHHHHHHHHHHHH
Q 018479 96 QHTVIPSWYQREGYITAMANLIEKELQNFDSPEQVMIFFSAHGVPLAYVE---EAG-------DPYKAEMEECVDLIME 164 (355)
Q Consensus 96 ~~~~i~~~~~~p~yi~a~~~~I~~~l~~~~~~~~~~llfsaHgiP~~~v~---~~G-------DpY~~~~~~ta~~v~e 164 (355)
++....+.=-+|..++.+.++=-..++...-++...|||+|||+|....+ .+| .|+..-++..++...+
T Consensus 33 ~iy~~g~IVHN~~Vv~~L~~~Gv~~v~~~ev~~g~~VIirAHGv~~~v~~~a~~rgl~iiDATCP~V~Kvh~~v~~~~~ 111 (297)
T 3dnf_A 33 KVYTLGPIIHNPQEVNRLKNLGVFPSQGEEFKEGDTVIIRSHGIPPEKEEALRKKGLKVIDATCPYVKAVHEAVCQLTR 111 (297)
T ss_dssp CEEESSCSSSCHHHHHHHHHHTEEECCSSCCCTTCEEEECTTCCCHHHHHHHHHTTCEEEECCCHHHHHHHHHHHHHHH
T ss_pred CEEEeCCcccCHHHHHHHHhCCCEEechhhCCCCCEEEEECCCCCHHHHHHHHHCCCEEEeCCCcchHHHHHHHHHHHh
Confidence 34555556666666666654410011111123455899999999976542 234 4777777777666554
No 74
>3lub_A Putative creatinine amidohydrolase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 2.11A {Bacteroides fragilis}
Probab=29.98 E-value=86 Score=28.26 Aligned_cols=27 Identities=11% Similarity=-0.023 Sum_probs=12.5
Q ss_pred HHHHHHHHHHhcc-CCCceEEEeeecCC
Q 018479 17 IQAEELRKSLWEK-NLPAKVYVGMRYWH 43 (355)
Q Consensus 17 ~qa~~l~~~L~~~-~~~~~V~~amry~~ 43 (355)
..++.+.+++.++ +.++.|...+.|+.
T Consensus 49 ~ia~~~a~~l~~~~~~~~lv~P~i~yG~ 76 (254)
T 3lub_A 49 DIAVEAAELALSRSGVRCMVMPPVPFGA 76 (254)
T ss_dssp HHHHHHHHHHHHHHCCCEEECCCBCCBC
T ss_pred HHHHHHHHhhhhhcCCCEEEeCCccccC
Confidence 3444444444332 33444555555555
No 75
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=29.95 E-value=48 Score=30.59 Aligned_cols=43 Identities=9% Similarity=0.334 Sum_probs=32.5
Q ss_pred CCcHHHHHHHHHhcCCceEEEEcceecccchhhHHHHHHHHHHHHHhcCC
Q 018479 190 KPYTDETIIKLGQKGVKSLLAVPISFVSEHIETLEEIDVEYKELALKSGI 239 (355)
Q Consensus 190 ~P~~~d~l~~L~~~G~k~VvVvP~gFvsD~lETl~eid~e~~e~a~~~G~ 239 (355)
.+.+.+.++++.+.|++.++++.-||..+. ..++.+.+++.|+
T Consensus 81 ~~~~~~~v~ea~~~Gi~~vVi~t~G~~~~~-------~~~l~~~A~~~gi 123 (297)
T 2yv2_A 81 APFAPDAVYEAVDAGIRLVVVITEGIPVHD-------TMRFVNYARQKGA 123 (297)
T ss_dssp GGGHHHHHHHHHHTTCSEEEECCCCCCHHH-------HHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHCCCCEEEEECCCCCHHH-------HHHHHHHHHHcCC
Confidence 367889999999999988888888885432 2356677777776
No 76
>3cx3_A Lipoprotein; zinc-binding, transport, lipid binding protein, metal binding protein; 2.40A {Streptococcus pneumoniae}
Probab=29.88 E-value=3e+02 Score=24.67 Aligned_cols=137 Identities=18% Similarity=0.221 Sum_probs=73.2
Q ss_pred cCCCCChHHHHHHHHHHHHHHHhCCCCCceEEEEeeCCCchhhhcccCCchHHHHHHHHHHHHHHhcccccCCceeEEEE
Q 018479 101 PSWYQREGYITAMANLIEKELQNFDSPEQVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRKITNAYTLAYQ 180 (355)
Q Consensus 101 ~~~~~~p~yi~a~~~~I~~~l~~~~~~~~~~llfsaHgiP~~~v~~~GDpY~~~~~~ta~~v~e~l~~~~~~~~~~l~fQ 180 (355)
+++|-+|.....+++.|.++|.+.+..... .+- .+.+.|..++.+.-+.+++.+..- .+..-+++-
T Consensus 119 PH~Wldp~~~~~~a~~I~~~L~~~dP~~a~-----------~y~-~N~~~~~~~L~~Ld~~~~~~l~~~--~~~~~v~~H 184 (284)
T 3cx3_A 119 PHTWLDPEKAGEEAQIIADKLSEVDSEHKE-----------TYQ-KNAQAFIKKAQELTKKFQPKFEKA--TQKTFVTQH 184 (284)
T ss_dssp CCGGGSHHHHHHHHHHHHHHHHHHSGGGHH-----------HHH-HHHHHHHHHHHHHHHHHHHHHHSC--SCCCEEEEE
T ss_pred CCcccCHHHHHHHHHHHHHHHHHhCcccHH-----------HHH-HHHHHHHHHHHHHHHHHHHHHhcC--CCCEEEEEC
Confidence 578999999999999999999876421110 111 233557777777777777666321 111111111
Q ss_pred ec---------------ccCCCCCCCcHH---HHHHHHHhcCCceEEEEcceecccchhhHHHHHHHHHHHHHhcCCceE
Q 018479 181 SR---------------VGPVEWLKPYTD---ETIIKLGQKGVKSLLAVPISFVSEHIETLEEIDVEYKELALKSGIEKW 242 (355)
Q Consensus 181 S~---------------~G~~~Wl~P~~~---d~l~~L~~~G~k~VvVvP~gFvsD~lETl~eid~e~~e~a~~~G~~~~ 242 (355)
.. .|..+=.+|+.. +.++.+.+.|++- +++-..|-....++ ++++.|.. +
T Consensus 185 ~af~Yf~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~-if~e~~~~~~~~~~----------ia~~~g~~-v 252 (284)
T 3cx3_A 185 TAFSYLAKRFGLNQLGIAGISPEQEPSPRQLTEIQEFVKTYKVKT-IFTESNASSKVAET----------LVKSTGVG-L 252 (284)
T ss_dssp SCCHHHHHHTTCCEEEEECSSTTCCCCSHHHHHHHHHHHHTTCCC-EEECSSSCCHHHHH----------HHSSSSCC-E
T ss_pred CchHHHHHHcCCEEeeccCCCCCCCCCHHHHHHHHHHHHHcCCCE-EEEeCCCCcHHHHH----------HHHHcCCe-E
Confidence 11 111111234333 3334445557654 45545665544444 46688886 5
Q ss_pred EEcCCCCC----CHHHHHHHHHHHH
Q 018479 243 GRVPALGC----EATFISDLADAVI 263 (355)
Q Consensus 243 ~rv~~ln~----~p~fi~~La~~V~ 263 (355)
..+..+.. ...++++|...+.
T Consensus 253 ~~l~~l~~~~~~~~~Y~~~m~~n~~ 277 (284)
T 3cx3_A 253 KTLNPLESDPQNDKTYLENLEENMS 277 (284)
T ss_dssp EECCCSSSCCCSSCCHHHHHHHHHH
T ss_pred EEecCcccCCCCcccHHHHHHHHHH
Confidence 55554443 2357776655443
No 77
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=29.36 E-value=52 Score=32.32 Aligned_cols=49 Identities=29% Similarity=0.471 Sum_probs=34.9
Q ss_pred CcHHHHHHHHHhcCCceEEEEcceecccchhhHHHHHHHHHHHHHhcCCc
Q 018479 191 PYTDETIIKLGQKGVKSLLAVPISFVSEHIETLEEIDVEYKELALKSGIE 240 (355)
Q Consensus 191 P~~~d~l~~L~~~G~k~VvVvP~gFvsD~lETl~eid~e~~e~a~~~G~~ 240 (355)
+.+.+.++++.+.|+|.+++++-||---.-|- .++..++.+.++++|+.
T Consensus 75 ~~~~~~v~e~~~~Gi~~vv~~s~G~~e~g~~g-~~~~~~l~~~a~~~g~~ 123 (457)
T 2csu_A 75 RFVKDTLIQCGEKGVKGVVIITAGFGETGEEG-KREEKELVEIAHKYGMR 123 (457)
T ss_dssp HHHHHHHHHHHHHTCCEEEECCCSSTTSCHHH-HHHHHHHHHHHHHHTCE
T ss_pred HHHHHHHHHHHHcCCCEEEEecCCCCcccccc-HHHHHHHHHHHHHcCCE
Confidence 57788999999999999999998884211121 12344677888888864
No 78
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=28.92 E-value=3.4e+02 Score=24.86 Aligned_cols=94 Identities=20% Similarity=0.175 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHHHHhcccccCCceeEEEEecccCCCCCCCcHHHHHHHH---HhcCC-ceEEEEcceecccchhhHHHHH
Q 018479 152 KAEMEECVDLIMEELEKRKITNAYTLAYQSRVGPVEWLKPYTDETIIKL---GQKGV-KSLLAVPISFVSEHIETLEEID 227 (355)
Q Consensus 152 ~~~~~~ta~~v~e~l~~~~~~~~~~l~fQS~~G~~~Wl~P~~~d~l~~L---~~~G~-k~VvVvP~gFvsD~lETl~eid 227 (355)
..|-.+..+.+.+..+.+ +.+-.. .| ..+|.++++.. .+.|. +.++++||.|..-.-|-+++
T Consensus 59 ~~Er~~v~~~~~~~~~gr-----vpViaG--vg-----~~~t~~ai~la~~A~~~Ga~davlv~~P~y~~~s~~~l~~-- 124 (311)
T 3h5d_A 59 HDEELELFAAVQKVVNGR-----VPLIAG--VG-----TNDTRDSIEFVKEVAEFGGFAAGLAIVPYYNKPSQEGMYQ-- 124 (311)
T ss_dssp HHHHHHHHHHHHHHSCSS-----SCEEEE--CC-----CSSHHHHHHHHHHHHHSCCCSEEEEECCCSSCCCHHHHHH--
T ss_pred HHHHHHHHHHHHHHhCCC-----CcEEEe--CC-----CcCHHHHHHHHHHHHhcCCCcEEEEcCCCCCCCCHHHHHH--
Confidence 556666777777765422 233332 23 57888888753 34486 99999998876655555554
Q ss_pred HHHHHHHHhcCCceEEE-cC---CCCCCHHHHHHHHH
Q 018479 228 VEYKELALKSGIEKWGR-VP---ALGCEATFISDLAD 260 (355)
Q Consensus 228 ~e~~e~a~~~G~~~~~r-v~---~ln~~p~fi~~La~ 260 (355)
-++.+++..++.-+.| +| -.+-+++.+..|++
T Consensus 125 -~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 160 (311)
T 3h5d_A 125 -HFKAIADASDLPIIIYNIPGRVVVELTPETMLRLAD 160 (311)
T ss_dssp -HHHHHHHSCSSCEEEEECHHHHSSCCCHHHHHHHHT
T ss_pred -HHHHHHHhCCCCEEEEecccccCCCCCHHHHHHHhc
Confidence 6778887766653333 22 35677777766664
No 79
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=28.55 E-value=30 Score=28.08 Aligned_cols=45 Identities=18% Similarity=0.132 Sum_probs=30.8
Q ss_pred CcHHHHHHHHHhcCCceEEEEcceecccchhhHHHHHHHHHHHHHhcCCceEEEcCC
Q 018479 191 PYTDETIIKLGQKGVKSLLAVPISFVSEHIETLEEIDVEYKELALKSGIEKWGRVPA 247 (355)
Q Consensus 191 P~~~d~l~~L~~~G~k~VvVvP~gFvsD~lETl~eid~e~~e~a~~~G~~~~~rv~~ 247 (355)
+.+.++++++.+.|++.+++.+-++ ..+..+.+++.|+. +.--.|
T Consensus 80 ~~v~~v~~~~~~~g~~~i~~~~~~~-----------~~~l~~~a~~~Gi~-~igpnc 124 (138)
T 1y81_A 80 KVGLQVAKEAVEAGFKKLWFQPGAE-----------SEEIRRFLEKAGVE-YSFGRC 124 (138)
T ss_dssp HHHHHHHHHHHHTTCCEEEECTTSC-----------CHHHHHHHHHHTCE-EECSCC
T ss_pred HHHHHHHHHHHHcCCCEEEEcCccH-----------HHHHHHHHHHCCCE-EEcCCc
Confidence 6778888888888998877776332 23567778888874 543334
No 80
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A*
Probab=28.35 E-value=3.2e+02 Score=24.44 Aligned_cols=131 Identities=11% Similarity=0.205 Sum_probs=76.7
Q ss_pred CCHHHHHHHHHHcCCCEEEEeecCccccccchHHHHHHHHHHHHhccccCCceeEEecCCCCChHHHHHHHHHHHHHHHh
Q 018479 44 PFTEEAIEQIKRDGITKLVVLPLYPQFSISTSGSSLRLLESIFREDEYLVNMQHTVIPSWYQREGYITAMANLIEKELQN 123 (355)
Q Consensus 44 P~i~~~l~~l~~~G~~~IvvlPlyPqyS~~ttgs~~~~~~e~~~~~~~~~~~~~~~i~~~~~~p~yi~a~~~~I~~~l~~ 123 (355)
+..++-++.|++.|+.-|-+ |+. ++.. .+. -.+|..++.+.+.+-+-|..+.+
T Consensus 41 ~~~~~d~~~l~~~G~n~vRi-~i~--w~~~------------------~~~-----~~~~~~~~~~~~~~d~~v~~a~~- 93 (320)
T 3nco_A 41 YIEDEYFKIIKERGFDSVRI-PIR--WSAH------------------ISE-----KYPYEIDKFFLDRVKHVVDVALK- 93 (320)
T ss_dssp CCCHHHHHHHHHHTCCEEEE-CCC--GGGS------------------BCS-----STTCCBCHHHHHHHHHHHHHHHH-
T ss_pred cCCHHHHHHHHHCCCCEEEE-eee--hHHh------------------cCC-----CCCCccCHHHHHHHHHHHHHHHH-
Confidence 44578899999999987776 542 1100 000 12455677777666665555544
Q ss_pred CCCCCceEEEEeeCCCchhhhcccCCchHHHHHHHHHHHHHHhcccccCCceeEEEEecccCCCCCCC-------cHHHH
Q 018479 124 FDSPEQVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRKITNAYTLAYQSRVGPVEWLKP-------YTDET 196 (355)
Q Consensus 124 ~~~~~~~~llfsaHgiP~~~v~~~GDpY~~~~~~ta~~v~e~l~~~~~~~~~~l~fQS~~G~~~Wl~P-------~~~d~ 196 (355)
....+++..|+.+--.- ..+.+...+.+..+.|+++.+.. +-.+.|+- ..+++... ...++
T Consensus 94 ----~Gi~vildlh~~~~~~~--~~~~~~~~~~~~~~~ia~~~~~~----~~vv~~~l--~NEP~~~~~~~~~~~~~~~~ 161 (320)
T 3nco_A 94 ----NDLVVIINCHHFEELYQ--APDKYGPVLVEIWKQVAQAFKDY----PDKLFFEI--FNEPAQNLTPTKWNELYPKV 161 (320)
T ss_dssp ----TTCEEEEECCCCHHHHH--CHHHHHHHHHHHHHHHHHHHTTS----CTTEEEEC--CSCCCTTSCHHHHHHHHHHH
T ss_pred ----CCCEEEEEcCCCccccc--CcHHHHHHHHHHHHHHHHHHcCC----CceEEEEe--ccCCCCCCCHHHHHHHHHHH
Confidence 24678999998764321 11235677777777888877532 22357753 34444322 24445
Q ss_pred HHHHHhcCCceEEEEcc
Q 018479 197 IIKLGQKGVKSLLAVPI 213 (355)
Q Consensus 197 l~~L~~~G~k~VvVvP~ 213 (355)
++.+.+.+.++.++++.
T Consensus 162 ~~~IR~~dp~~~i~v~~ 178 (320)
T 3nco_A 162 LGEIRKTNPSRIVIIDV 178 (320)
T ss_dssp HHHHHHHCSSCCEEEEC
T ss_pred HHHHHhcCCCcEEEECC
Confidence 55555667777777764
No 81
>3v4k_A DNA DC->DU-editing enzyme apobec-3G; antiviral defense, HOST-virus interaction, hydrola metal-binding, nucleus; HET: DNA; 1.38A {Homo sapiens} PDB: 3v4j_A* 3ir2_A* 2kem_A* 2jyw_A* 2kbo_A* 3e1u_A* 3iqs_A*
Probab=28.31 E-value=82 Score=27.74 Aligned_cols=64 Identities=14% Similarity=0.183 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHhcccccCCceeEE-EEecccCCCCCCCcHHHHHHHHHhcCCceEEEEcceecccchhhHHH
Q 018479 155 MEECVDLIMEELEKRKITNAYTLA-YQSRVGPVEWLKPYTDETIIKLGQKGVKSLLAVPISFVSEHIETLEE 225 (355)
Q Consensus 155 ~~~ta~~v~e~l~~~~~~~~~~l~-fQS~~G~~~Wl~P~~~d~l~~L~~~G~k~VvVvP~gFvsD~lETl~e 225 (355)
|.+.|+.|++-|... .++.+. |=||.= -| .|...++|+.|.++|+ .|-|+-+.=+.+|-+|..|
T Consensus 111 C~~CA~~v~~FL~~~---~~v~L~If~aRLY--~~-~~~~~~gLr~L~~aG~-~v~iM~~~ef~~CW~~FV~ 175 (203)
T 3v4k_A 111 CFSCAQEMAKFISKN---KHVSLCIKTARIY--DD-QGRCQEGLRTLAEAGA-KISIMTYSEFKHCWDTFVD 175 (203)
T ss_pred hHHHHHHHHHHHhhC---CCeEEEEEEEeec--cc-CchHHHHHHHHHHCCC-eEEecCHHHHHHHHHHHcc
Confidence 455677777777532 135655 445542 34 7888889999988885 5666666655666655443
No 82
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=28.13 E-value=2.3e+02 Score=24.39 Aligned_cols=93 Identities=14% Similarity=0.168 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHhcccccCCceeEEEEecccCCCCCCCc-HHHHHHHHHhcCCceEEEEcceecccchhhHHHHHHHHHH
Q 018479 154 EMEECVDLIMEELEKRKITNAYTLAYQSRVGPVEWLKPY-TDETIIKLGQKGVKSLLAVPISFVSEHIETLEEIDVEYKE 232 (355)
Q Consensus 154 ~~~~ta~~v~e~l~~~~~~~~~~l~fQS~~G~~~Wl~P~-~~d~l~~L~~~G~k~VvVvP~gFvsD~lETl~eid~e~~e 232 (355)
...+..+.+++ +|.++ +++..- ++ +..| .|. +++..+.+.+.|.+-+.+.++.+ +.++.+. +.-+
T Consensus 31 ~~~~~l~~~~~-~G~~~----vEl~~~-~~-~~~~-~~~~~~~~~~~l~~~gl~i~~~~~~~~--~~~~~~~----~~i~ 96 (257)
T 3lmz_A 31 DLDTTLKTLER-LDIHY----LCIKDF-HL-PLNS-TDEQIRAFHDKCAAHKVTGYAVGPIYM--KSEEEID----RAFD 96 (257)
T ss_dssp CHHHHHHHHHH-TTCCE----EEECTT-TS-CTTC-CHHHHHHHHHHHHHTTCEEEEEEEEEE--CSHHHHH----HHHH
T ss_pred CHHHHHHHHHH-hCCCE----EEEecc-cC-CCCC-CHHHHHHHHHHHHHcCCeEEEEecccc--CCHHHHH----HHHH
Confidence 46666666553 45543 444321 11 1122 222 23334445556875444444333 3343332 3566
Q ss_pred HHHhcCCceEEEcCCCCCCHHHHHHHHHHHHH
Q 018479 233 LALKSGIEKWGRVPALGCEATFISDLADAVIE 264 (355)
Q Consensus 233 ~a~~~G~~~~~rv~~ln~~p~fi~~La~~V~e 264 (355)
.|.+.|...++..| + .+..+.+++..++
T Consensus 97 ~A~~lGa~~v~~~p--~--~~~l~~l~~~a~~ 124 (257)
T 3lmz_A 97 YAKRVGVKLIVGVP--N--YELLPYVDKKVKE 124 (257)
T ss_dssp HHHHHTCSEEEEEE--C--GGGHHHHHHHHHH
T ss_pred HHHHhCCCEEEecC--C--HHHHHHHHHHHHH
Confidence 77788887444322 2 2344455555554
No 83
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=27.95 E-value=3.4e+02 Score=24.55 Aligned_cols=93 Identities=11% Similarity=0.078 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHHHHhcccccCCceeEEEEecccCCCCCCCcHHHHHHHH---HhcCCceEEEEcceecc-cchhhHHHHH
Q 018479 152 KAEMEECVDLIMEELEKRKITNAYTLAYQSRVGPVEWLKPYTDETIIKL---GQKGVKSLLAVPISFVS-EHIETLEEID 227 (355)
Q Consensus 152 ~~~~~~ta~~v~e~l~~~~~~~~~~l~fQS~~G~~~Wl~P~~~d~l~~L---~~~G~k~VvVvP~gFvs-D~lETl~eid 227 (355)
..|-.+..+.+.+..+.+ +.+-.. .| ..+|.++++.. .+.|++.++++||.|.. -.-|-+++
T Consensus 55 ~~Er~~v~~~~~~~~~gr-----~pviaG--vg-----~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~-- 120 (294)
T 3b4u_A 55 SRERQAILSSFIAAGIAP-----SRIVTG--VL-----VDSIEDAADQSAEALNAGARNILLAPPSYFKNVSDDGLFA-- 120 (294)
T ss_dssp HHHHHHHHHHHHHTTCCG-----GGEEEE--EC-----CSSHHHHHHHHHHHHHTTCSEEEECCCCSSCSCCHHHHHH--
T ss_pred HHHHHHHHHHHHHHhCCC-----CcEEEe--CC-----CccHHHHHHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHH--
Confidence 456666667777665322 233332 22 57888887654 45699999999998876 44455554
Q ss_pred HHHHHHHHhc---CCceEEE-cC---CCCCCHHHHHHHH
Q 018479 228 VEYKELALKS---GIEKWGR-VP---ALGCEATFISDLA 259 (355)
Q Consensus 228 ~e~~e~a~~~---G~~~~~r-v~---~ln~~p~fi~~La 259 (355)
-++++++.. ++.-+.| +| -.+-+++.+..|+
T Consensus 121 -~f~~va~a~p~~~lPiilYn~P~~tg~~l~~~~~~~La 158 (294)
T 3b4u_A 121 -WFSAVFSKIGKDARDILVYNIPSVTMVTLSVELVGRLK 158 (294)
T ss_dssp -HHHHHHHHHCTTCCCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred -HHHHHHHhcCCCCCcEEEEECcchhCcCCCHHHHHHHH
Confidence 667788766 5553333 33 2466777776666
No 84
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=27.90 E-value=3.5e+02 Score=24.67 Aligned_cols=93 Identities=22% Similarity=0.194 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHHHHhcccccCCceeEEEEecccCCCCCCCcHHHHHHH---HHhcCCceEEEEcceecc--cchhhHHHH
Q 018479 152 KAEMEECVDLIMEELEKRKITNAYTLAYQSRVGPVEWLKPYTDETIIK---LGQKGVKSLLAVPISFVS--EHIETLEEI 226 (355)
Q Consensus 152 ~~~~~~ta~~v~e~l~~~~~~~~~~l~fQS~~G~~~Wl~P~~~d~l~~---L~~~G~k~VvVvP~gFvs--D~lETl~ei 226 (355)
..|-.+..+.+.+..+.+ +.+--. .| ..+|.++++. ..+.|++.++++||.|.. -+-|-+++
T Consensus 66 ~~Er~~v~~~~~~~~~gr-----~pviaG--vg-----~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~~s~~~l~~- 132 (307)
T 3s5o_A 66 SSERLEVVSRVRQAMPKN-----RLLLAG--SG-----CESTQATVEMTVSMAQVGADAAMVVTPCYYRGRMSSAALIH- 132 (307)
T ss_dssp HHHHHHHHHHHHHTSCTT-----SEEEEE--CC-----CSSHHHHHHHHHHHHHTTCSEEEEECCCTTGGGCCHHHHHH-
T ss_pred HHHHHHHHHHHHHHcCCC-----CcEEEe--cC-----CCCHHHHHHHHHHHHHcCCCEEEEcCCCcCCCCCCHHHHHH-
Confidence 556666777777765322 333322 23 4788888864 455799999999887763 23444554
Q ss_pred HHHHHHHHHhcCCceEEE-cC---CCCCCHHHHHHHH
Q 018479 227 DVEYKELALKSGIEKWGR-VP---ALGCEATFISDLA 259 (355)
Q Consensus 227 d~e~~e~a~~~G~~~~~r-v~---~ln~~p~fi~~La 259 (355)
-++.+++..++.-+.| +| -.+-+++.+..|+
T Consensus 133 --~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La 167 (307)
T 3s5o_A 133 --HYTKVADLSPIPVVLYSVPANTGLDLPVDAVVTLS 167 (307)
T ss_dssp --HHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred --HHHHHHhhcCCCEEEEeCCcccCCCCCHHHHHHHh
Confidence 5677777666553322 22 2466777766665
No 85
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=27.78 E-value=3.4e+02 Score=24.47 Aligned_cols=59 Identities=20% Similarity=0.240 Sum_probs=31.4
Q ss_pred HHHHHHHHHhcCCceEEEEcceecccchhhHHHHHHHHHHHHHhcCCceEEEcCCCCCCHHHHHHHHHH
Q 018479 193 TDETIIKLGQKGVKSLLAVPISFVSEHIETLEEIDVEYKELALKSGIEKWGRVPALGCEATFISDLADA 261 (355)
Q Consensus 193 ~~d~l~~L~~~G~k~VvVvP~gFvsD~lETl~eid~e~~e~a~~~G~~~~~rv~~ln~~p~fi~~La~~ 261 (355)
++.-++++++.|++.+++.-..+ |. ..++++.++++|+. ....-.++++++.++.+++.
T Consensus 112 ~e~f~~~~~~aGvdgvii~Dlp~-----ee----~~~~~~~~~~~gl~-~i~liaP~t~~eri~~i~~~ 170 (267)
T 3vnd_A 112 IDEFYTKAQAAGVDSVLIADVPV-----EE----SAPFSKAAKAHGIA-PIFIAPPNADADTLKMVSEQ 170 (267)
T ss_dssp HHHHHHHHHHHTCCEEEETTSCG-----GG----CHHHHHHHHHTTCE-EECEECTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEeCCCCH-----hh----HHHHHHHHHHcCCe-EEEEECCCCCHHHHHHHHHh
Confidence 45566666777776666632221 11 12456666677765 33444566666555554444
No 86
>3lm3_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.44A {Parabacteroides distasonis}
Probab=27.73 E-value=1.3e+02 Score=28.46 Aligned_cols=103 Identities=10% Similarity=0.025 Sum_probs=71.8
Q ss_pred HHHHHHHHHHHHHhccCCCceEEEeeec-----CCCCHHHH---HHHHHHcCCCEEEEeecCccccccchHHHHHHHHHH
Q 018479 14 ISCIQAEELRKSLWEKNLPAKVYVGMRY-----WHPFTEEA---IEQIKRDGITKLVVLPLYPQFSISTSGSSLRLLESI 85 (355)
Q Consensus 14 ~t~~qa~~l~~~L~~~~~~~~V~~amry-----~~P~i~~~---l~~l~~~G~~~IvvlPlyPqyS~~ttgs~~~~~~e~ 85 (355)
+|-+..+++..++++.+++.++.+||.+ ..|...+. +.+|.++=-|+|-.+|=||---..+.--+.+++.|+
T Consensus 51 Htl~gVr~~reAfa~~~Pn~rlTWa~t~~aled~rp~yrqIr~Yv~~c~~kyGDEV~~~pGYf~~mylPr~eV~ReMSEA 130 (449)
T 3lm3_A 51 HTLEGVRALREAFATNNPNGRLTWGFTMNALEDGRKNYREIRDYVVECQKKYGDEVTYFPGYFPAMYLPRERVNREMSEA 130 (449)
T ss_dssp CCHHHHHHHHHHHHTTCTTCCCEEEECHHHHHCCSHHHHHHHHHHHHHHHHHCCEEEECCCSCHHHHSCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCCCceEEEEEEEeecccCChhHHHHHHHHHHHHHHhCCceeecCCCchhhcCcHHHHHHHHHHH
Confidence 3556678888888888999999999965 46665554 456666666999999999865566666777777666
Q ss_pred HHhcccc--CCceeEEecCCCCChHHHHHHHHH
Q 018479 86 FREDEYL--VNMQHTVIPSWYQREGYITAMANL 116 (355)
Q Consensus 86 ~~~~~~~--~~~~~~~i~~~~~~p~yi~a~~~~ 116 (355)
+.....+ -+..-.-+-.++.++.=+..++++
T Consensus 131 i~~lh~m~~~~YrPksl~~gflsa~nl~~Lae~ 163 (449)
T 3lm3_A 131 IEIISKMVGNGYRPQSIMGGFLSADNLRYLAEK 163 (449)
T ss_dssp HHHHHHHHCTTCCCSEEECSSCCHHHHHHHHHH
T ss_pred HHHHHHhccCCcCchhhhhcccCHHHHhhHHhh
Confidence 6532111 011223677888899888888775
No 87
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli}
Probab=27.50 E-value=52 Score=32.75 Aligned_cols=43 Identities=14% Similarity=0.179 Sum_probs=33.5
Q ss_pred CCcHHHHHHHHHhcCCceEEEEcceecccchhhHHHHHHHHHHHHHhcCCc
Q 018479 190 KPYTDETIIKLGQKGVKSLLAVPISFVSEHIETLEEIDVEYKELALKSGIE 240 (355)
Q Consensus 190 ~P~~~d~l~~L~~~G~k~VvVvP~gFvsD~lETl~eid~e~~e~a~~~G~~ 240 (355)
.+.+.++++++.+.|++ ++|+.=||- .+...+.++.+++.|+.
T Consensus 46 a~~v~~~v~e~~~~Gv~-~viis~Gf~-------~~~~~~l~~~A~~~g~r 88 (480)
T 3dmy_A 46 GEYAAELANQALDRNLN-VMMFSDNVT-------LEDEIQLKTRAREKGLL 88 (480)
T ss_dssp HHHHHHHHHHHHHTTCE-EEECCCCCC-------HHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHhcCCC-EEEECCCCC-------HHHHHHHHHHHHHcCCE
Confidence 37889999999999998 888777775 23345778888888864
No 88
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=27.33 E-value=2.3e+02 Score=26.87 Aligned_cols=138 Identities=14% Similarity=0.148 Sum_probs=75.7
Q ss_pred CceeEEecCCCCCh-HHHHHHHHHHHHHHHhCCCCCceEEEEeeCCCchhhhcccCCch---HHHHHHHHHHHHHHhccc
Q 018479 94 NMQHTVIPSWYQRE-GYITAMANLIEKELQNFDSPEQVMIFFSAHGVPLAYVEEAGDPY---KAEMEECVDLIMEELEKR 169 (355)
Q Consensus 94 ~~~~~~i~~~~~~p-~yi~a~~~~I~~~l~~~~~~~~~~llfsaHgiP~~~v~~~GDpY---~~~~~~ta~~v~e~l~~~ 169 (355)
++-.-.+.||..+- -=.+++.+.|+..++. + -..++.. |+ .|..+ ..|-.+..+.+.+..+.+
T Consensus 62 Gi~~alvTPF~~dg~ID~~al~~lv~~li~~-G---v~Gl~v~--GT-------TGE~~~Ls~eEr~~vi~~~ve~~~gr 128 (360)
T 4dpp_A 62 RVITAIKTPYLPDGRFDLEAYDDLVNIQIQN-G---AEGVIVG--GT-------TGEGQLMSWDEHIMLIGHTVNCFGGS 128 (360)
T ss_dssp CEEEECCCCBCTTSSBCHHHHHHHHHHHHHT-T---CCEEEES--ST-------TTTGGGSCHHHHHHHHHHHHHHHTTT
T ss_pred CeEEEEeCcCCCCCCcCHHHHHHHHHHHHHc-C---CCEEEec--cc-------ccChhhCCHHHHHHHHHHHHHHhCCC
Confidence 33344577886443 2334444444444432 1 1134432 11 24332 455566666666665422
Q ss_pred ccCCceeEEEEecccCCCCCCCcHHHHHHHH---HhcCCceEEEEcceecccchhhHHHHHHHHHHHHHhcCCceEEEcC
Q 018479 170 KITNAYTLAYQSRVGPVEWLKPYTDETIIKL---GQKGVKSLLAVPISFVSEHIETLEEIDVEYKELALKSGIEKWGRVP 246 (355)
Q Consensus 170 ~~~~~~~l~fQS~~G~~~Wl~P~~~d~l~~L---~~~G~k~VvVvP~gFvsD~lETl~eid~e~~e~a~~~G~~~~~rv~ 246 (355)
+.+--. .| ..+|.++++.. .+.|++.++++||.|..-.-|-+++ -++.+++..++.-| -+|
T Consensus 129 -----vpViaG--vg-----~~st~eai~la~~A~~~Gadavlvv~PyY~k~sq~gl~~---hf~~IA~a~PiilY-NiP 192 (360)
T 4dpp_A 129 -----IKVIGN--TG-----SNSTREAIHATEQGFAVGMHAALHINPYYGKTSIEGLIA---HFQSVLHMGPTIIY-NVP 192 (360)
T ss_dssp -----SEEEEE--CC-----CSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHH---HHHTTGGGSCEEEE-ECH
T ss_pred -----CeEEEe--cC-----CCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHH---HHHHHHHhCCEEEE-eCC
Confidence 333332 23 57888888754 4569999999998776655554544 56777766554322 233
Q ss_pred ---CCCCCHHHHHHHHH
Q 018479 247 ---ALGCEATFISDLAD 260 (355)
Q Consensus 247 ---~ln~~p~fi~~La~ 260 (355)
-.+-+++.+..|++
T Consensus 193 ~rTg~~ls~e~l~~La~ 209 (360)
T 4dpp_A 193 GRTGQDIPPRAIFKLSQ 209 (360)
T ss_dssp HHHSCCCCHHHHHHHTT
T ss_pred cccCCCCCHHHHHHHhc
Confidence 25677777766653
No 89
>3szu_A ISPH, 4-hydroxy-3-methylbut-2-ENYL diphosphate reductas; 3Fe-4S iron-sulfur cluster, conserved cysteine, IPP and DMAP production final STEP; HET: H6P; 1.40A {Escherichia coli} PDB: 3szl_A* 3f7t_A* 3szo_A* 3t0f_A* 3t0g_A* 3urk_A* 3utc_A* 3utd_A* 3uv3_A* 3uv6_A* 3uv7_A* 3uwm_A* 3ke8_A* 3ke9_A* 3kef_A* 3kel_A 3kem_A*
Probab=26.97 E-value=68 Score=30.35 Aligned_cols=67 Identities=16% Similarity=0.199 Sum_probs=39.3
Q ss_pred eEEecCCCCChHHHHHHHHHHH---HHHHhCCCCCceEEEEeeCCCchhhhc---ccC-------CchHHHHHHHHHHHH
Q 018479 97 HTVIPSWYQREGYITAMANLIE---KELQNFDSPEQVMIFFSAHGVPLAYVE---EAG-------DPYKAEMEECVDLIM 163 (355)
Q Consensus 97 ~~~i~~~~~~p~yi~a~~~~I~---~~l~~~~~~~~~~llfsaHgiP~~~v~---~~G-------DpY~~~~~~ta~~v~ 163 (355)
+....+.=-+|..++.+.++=- +.+.+. ++...|||+|||+|....+ .+| .|+..-++..++...
T Consensus 45 iy~~g~IVHN~~Vv~~L~~~Gv~~ve~l~ev--~~g~~VIirAHGv~~~v~~~a~~rgl~iiDATCP~V~Kvh~~v~~~~ 122 (328)
T 3szu_A 45 IYVRHEVVHNRYVVDSLRERGAIFIEQISEV--PDGAILIFSAHGVSQAVRNEAKSRDLTVFDATCPLVTKVHMEVARAS 122 (328)
T ss_dssp EEEESCSSSCHHHHHHHHHTTEEEESSGGGS--CTTCEEEECTTCCCHHHHHHHHHTTCEEEECCCHHHHHHHHHHHHHH
T ss_pred EEEeCCCccCHHHHHHHHHCCCEEecchhhC--CCCCEEEEECCCCCHHHHHHHHHCCCEEEECCCcchHHHHHHHHHHH
Confidence 4455555556666655544300 112222 3455799999999976542 234 478777777777666
Q ss_pred HH
Q 018479 164 EE 165 (355)
Q Consensus 164 e~ 165 (355)
++
T Consensus 123 ~~ 124 (328)
T 3szu_A 123 RR 124 (328)
T ss_dssp HH
T ss_pred hC
Confidence 53
No 90
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=26.68 E-value=43 Score=27.24 Aligned_cols=46 Identities=17% Similarity=0.055 Sum_probs=31.6
Q ss_pred CcHHHHHHHHHhcCCceEEEEcceecccchhhHHHHHHHHHHHHHhcCCceEEEcCCC
Q 018479 191 PYTDETIIKLGQKGVKSLLAVPISFVSEHIETLEEIDVEYKELALKSGIEKWGRVPAL 248 (355)
Q Consensus 191 P~~~d~l~~L~~~G~k~VvVvP~gFvsD~lETl~eid~e~~e~a~~~G~~~~~rv~~l 248 (355)
+.+.++++++.+.|++.+++. .|+. ..++.+.++++|+. +.-..|+
T Consensus 88 ~~~~~vv~~~~~~gi~~i~~~-~g~~----------~~~l~~~a~~~Gi~-vvGpnc~ 133 (144)
T 2d59_A 88 KLTMEYVEQAIKKGAKVVWFQ-YNTY----------NREASKKADEAGLI-IVANRCM 133 (144)
T ss_dssp HHHHHHHHHHHHHTCSEEEEC-TTCC----------CHHHHHHHHHTTCE-EEESCCH
T ss_pred HHHHHHHHHHHHcCCCEEEEC-CCch----------HHHHHHHHHHcCCE-EEcCCch
Confidence 577888889999999876543 4543 23677888888875 5444454
No 91
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=26.61 E-value=53 Score=28.37 Aligned_cols=50 Identities=16% Similarity=0.151 Sum_probs=36.2
Q ss_pred CCCCCCcHHHHHHHHHhcCCceEEEEcc--eecccchhhHHHHHHHHH-HHHHhcCC
Q 018479 186 VEWLKPYTDETIIKLGQKGVKSLLAVPI--SFVSEHIETLEEIDVEYK-ELALKSGI 239 (355)
Q Consensus 186 ~~Wl~P~~~d~l~~L~~~G~k~VvVvP~--gFvsD~lETl~eid~e~~-e~a~~~G~ 239 (355)
.-|+.|-+.+-+.+|.+.| +.|+|+ ||.. ..+++.|+-...- +.....|+
T Consensus 127 ~m~~~~~~~~N~~~L~~~G---~~ivpp~~g~~~-~p~si~div~~~v~~~ld~~~i 179 (189)
T 2ejb_A 127 EAPYNEIHLENMLKITRMG---GVVVPASPAFYH-KPQSIDDMINFVVGKLLDVLRI 179 (189)
T ss_dssp CSSCCHHHHHHHHHHHHTT---CEEEECCCCSTT-CCCSHHHHHHHHHHHHHHHTTC
T ss_pred CCCCCHHHHHHHHHHHHCC---eEEeCCChHHhh-CCCCHHHHHHHHHHHHHHhCCC
Confidence 5599999999999999987 567775 6754 6677777655553 34455665
No 92
>3hh8_A Metal ABC transporter substrate-binding lipoprote; lipoprotein, metal binding, cell membrane, copper transport, iron; 1.87A {Streptococcus pyogenes serotype M1} SCOP: c.92.2.2 PDB: 1psz_A 3ztt_A
Probab=26.57 E-value=2.8e+02 Score=25.22 Aligned_cols=139 Identities=14% Similarity=0.072 Sum_probs=73.9
Q ss_pred cCCCCChHHHHHHHHHHHHHHHhCCCCCceEEEEeeCCCchhhhcccCCchHHHHHHHHHHHHHHhcccccCCceeEEEE
Q 018479 101 PSWYQREGYITAMANLIEKELQNFDSPEQVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRKITNAYTLAYQ 180 (355)
Q Consensus 101 ~~~~~~p~yi~a~~~~I~~~l~~~~~~~~~~llfsaHgiP~~~v~~~GDpY~~~~~~ta~~v~e~l~~~~~~~~~~l~fQ 180 (355)
+++|-+|.....+++.|.++|.+.+.... ..+- .+.+-|..++.+.-+.+++.+..-......-++|-
T Consensus 123 PHvWldp~~~~~~a~~I~~~L~~~dP~~a-----------~~y~-~N~~~~~~~L~~Ld~~~~~~l~~~~~~~~~~v~~H 190 (294)
T 3hh8_A 123 PHAWLNLENGIIYSKNIAKQLIAKDPKNK-----------ETYE-KNLKAYVAKLEKLDKEAKSKFDAIAENKKLIVTSE 190 (294)
T ss_dssp CCGGGSHHHHHHHHHHHHHHHHHHCGGGH-----------HHHH-HHHHHHHHHHHHHHHHHHHTTTTSCGGGCCEEEEE
T ss_pred CceeCCHHHHHHHHHHHHHHHHHhCccch-----------HHHH-HHHHHHHHHHHHHHHHHHHHHhhCCccCcEEEEEC
Confidence 56889999999999999999987642110 0111 23345667777777777766532100001112221
Q ss_pred ecc---------------cCCCCCCCcHH---HHHHHHHhcCCceEEEEcceecccchhhHHHHHHHHHHHHHhcCCceE
Q 018479 181 SRV---------------GPVEWLKPYTD---ETIIKLGQKGVKSLLAVPISFVSEHIETLEEIDVEYKELALKSGIEKW 242 (355)
Q Consensus 181 S~~---------------G~~~Wl~P~~~---d~l~~L~~~G~k~VvVvP~gFvsD~lETl~eid~e~~e~a~~~G~~~~ 242 (355)
..+ |..+=.+|+.. +.++.+.+.+++-|++-| .|-...++ .++++.|..-.
T Consensus 191 ~af~Yf~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~-~~~~~~~~----------~ia~~~g~~v~ 259 (294)
T 3hh8_A 191 GCFKYFSKAYGVPSAYIWEINTEEEGTPDQISSLIEKLKVIKPSALFVES-SVDRRPME----------TVSKDSGIPIY 259 (294)
T ss_dssp SCCHHHHHHHTCCEEEEESSCCSCCCCHHHHHHHHHHHHHSCCSCEEEET-TSCSHHHH----------HHHHHHCCCEE
T ss_pred ChHHHHHHHcCCceeeccccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeC-CCCcHHHH----------HHHHHhCCcEE
Confidence 111 11111345433 344445566877666644 55444333 44667788744
Q ss_pred --EEcCCCC----CCHHHHHHHHHHH
Q 018479 243 --GRVPALG----CEATFISDLADAV 262 (355)
Q Consensus 243 --~rv~~ln----~~p~fi~~La~~V 262 (355)
.+.+.++ ....++++|..-+
T Consensus 260 ~~~~~~~l~~~~~~~~~Y~~~m~~n~ 285 (294)
T 3hh8_A 260 SEIFTDSIAKKGKPGDSYYAMMKWNL 285 (294)
T ss_dssp EEECSSSCCCTTSTTCSHHHHHHHHH
T ss_pred eeecCcccCCCCCCcccHHHHHHHHH
Confidence 4556665 2345666665543
No 93
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=26.46 E-value=58 Score=29.86 Aligned_cols=42 Identities=12% Similarity=0.153 Sum_probs=29.3
Q ss_pred CcHHHHHHHHHhcCCceEEEEcceecccchhhHHHHHHHHHHHHHhcCC
Q 018479 191 PYTDETIIKLGQKGVKSLLAVPISFVSEHIETLEEIDVEYKELALKSGI 239 (355)
Q Consensus 191 P~~~d~l~~L~~~G~k~VvVvP~gFvsD~lETl~eid~e~~e~a~~~G~ 239 (355)
+.+.+.++++.+.|++.++++.-||-.+. ..+..+.+++.|+
T Consensus 75 ~~~~~~~~ea~~~Gi~~vVi~t~G~~~~~-------~~~l~~~a~~~gi 116 (288)
T 1oi7_A 75 PAAADAALEAAHAGIPLIVLITEGIPTLD-------MVRAVEEIKALGS 116 (288)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCSCCCHHH-------HHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHCCCCEEEEECCCCCHHH-------HHHHHHHHHHcCC
Confidence 56778888888888887888887875322 2245666767776
No 94
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=26.22 E-value=49 Score=30.44 Aligned_cols=42 Identities=12% Similarity=0.385 Sum_probs=30.8
Q ss_pred CcHHHHHHHHHhcCCceEEEEcceecccchhhHHHHHHHHHHHHHhcCC
Q 018479 191 PYTDETIIKLGQKGVKSLLAVPISFVSEHIETLEEIDVEYKELALKSGI 239 (355)
Q Consensus 191 P~~~d~l~~L~~~G~k~VvVvP~gFvsD~lETl~eid~e~~e~a~~~G~ 239 (355)
+.+.+.++++.+.|++.+++++-||-.+. ..++.+.+++.|+
T Consensus 81 ~~~~~~v~ea~~~Gi~~vVi~t~G~~~~~-------~~~l~~~A~~~gi 122 (294)
T 2yv1_A 81 PFAKDAVFEAIDAGIELIVVITEHIPVHD-------TMEFVNYAEDVGV 122 (294)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCSCCCHHH-------HHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHCCCCEEEEECCCCCHHH-------HHHHHHHHHHcCC
Confidence 57788888998999888888888884322 2356677777776
No 95
>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*
Probab=26.01 E-value=2.1e+02 Score=23.18 Aligned_cols=67 Identities=13% Similarity=0.208 Sum_probs=36.0
Q ss_pred CCcHHHHHHHHHhcCCceEEEEcceecccc-hhhHHHHHHHHHHHHHhcCCceEEEcCCCCCCH--HHHHHHHHHHHHhC
Q 018479 190 KPYTDETIIKLGQKGVKSLLAVPISFVSEH-IETLEEIDVEYKELALKSGIEKWGRVPALGCEA--TFISDLADAVIESL 266 (355)
Q Consensus 190 ~P~~~d~l~~L~~~G~k~VvVvP~gFvsD~-lETl~eid~e~~e~a~~~G~~~~~rv~~ln~~p--~fi~~La~~V~e~l 266 (355)
.|+-. .++.|+++|++-|+.. ..+. .+... +..+.+++.|+. +..+|+--.++ .-++.+.+.+.+..
T Consensus 27 ~p~~a-~a~~La~~Ga~vvi~~----r~~~e~~~~~----~~~~~~~~~G~~-~~~i~~Dv~~~~~~~v~~~~~~i~~~~ 96 (157)
T 3gxh_A 27 LPNEQ-QFSLLKQAGVDVVINL----MPDSSKDAHP----DEGKLVTQAGMD-YVYIPVDWQNPKVEDVEAFFAAMDQHK 96 (157)
T ss_dssp CCCHH-HHHHHHHTTCCEEEEC----SCTTSTTSCT----THHHHHHHTTCE-EEECCCCTTSCCHHHHHHHHHHHHHTT
T ss_pred CCCHH-HHHHHHHcCCCEEEEC----CCcccccccc----cHHHHHHHcCCe-EEEecCCCCCCCHHHHHHHHHHHHhcC
Confidence 36543 5577888888655432 1111 11000 122334466764 77888866666 66666666666543
No 96
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=26.01 E-value=2e+02 Score=26.14 Aligned_cols=93 Identities=18% Similarity=0.270 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHHHHhcccccCCceeEEEEecccCCCCCCCcHHHHHHHH---HhcCCceEEEEcceecccchhhHHHHHH
Q 018479 152 KAEMEECVDLIMEELEKRKITNAYTLAYQSRVGPVEWLKPYTDETIIKL---GQKGVKSLLAVPISFVSEHIETLEEIDV 228 (355)
Q Consensus 152 ~~~~~~ta~~v~e~l~~~~~~~~~~l~fQS~~G~~~Wl~P~~~d~l~~L---~~~G~k~VvVvP~gFvsD~lETl~eid~ 228 (355)
..|-.+..+.+.+..+.+ +.+-.. .| ..+|.++++.. .+.|++.++++||.|..-+-|-+++
T Consensus 53 ~~Er~~v~~~~~~~~~gr-----~pvi~G--vg-----~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~--- 117 (291)
T 3a5f_A 53 ETERKETIKFVIDKVNKR-----IPVIAG--TG-----SNNTAASIAMSKWAESIGVDGLLVITPYYNKTTQKGLVK--- 117 (291)
T ss_dssp HHHHHHHHHHHHHHHTTS-----SCEEEE--CC-----CSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHH---
T ss_pred HHHHHHHHHHHHHHhCCC-----CcEEEe--CC-----cccHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHH---
Confidence 455566666666665422 233332 23 57888887654 4569999999999886555555554
Q ss_pred HHHHHHHhcCCceEEE-cC---CCCCCHHHHHHHH
Q 018479 229 EYKELALKSGIEKWGR-VP---ALGCEATFISDLA 259 (355)
Q Consensus 229 e~~e~a~~~G~~~~~r-v~---~ln~~p~fi~~La 259 (355)
-++++++..++.-+.| +| -.+-+++.+.-|+
T Consensus 118 ~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La 152 (291)
T 3a5f_A 118 HFKAVSDAVSTPIIIYNVPGRTGLNITPGTLKELC 152 (291)
T ss_dssp HC-CTGGGCCSCEEEEECHHHHSCCCCHHHHHHHT
T ss_pred HHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHH
Confidence 5567776655543332 33 2456777666554
No 97
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=26.00 E-value=3.1e+02 Score=25.11 Aligned_cols=53 Identities=13% Similarity=0.115 Sum_probs=31.6
Q ss_pred CCceEEEeeecCCCCHHHHHHHH---HHcCCCEEEEeecCccc---cccchHHHHHHHHHHHH
Q 018479 31 LPAKVYVGMRYWHPFTEEAIEQI---KRDGITKLVVLPLYPQF---SISTSGSSLRLLESIFR 87 (355)
Q Consensus 31 ~~~~V~~amry~~P~i~~~l~~l---~~~G~~~IvvlPlyPqy---S~~ttgs~~~~~~e~~~ 87 (355)
..++|..+- +..++.++++.. .+.|++-++++| |.| ...|-....+.+....+
T Consensus 76 grvpviaGv--g~~~t~~ai~la~~A~~~Gadavlv~~--Pyy~~~~~~s~~~l~~~f~~va~ 134 (309)
T 3fkr_A 76 GRVPVIVTT--SHYSTQVCAARSLRAQQLGAAMVMAMP--PYHGATFRVPEAQIFEFYARVSD 134 (309)
T ss_dssp TSSCEEEEC--CCSSHHHHHHHHHHHHHTTCSEEEECC--SCBTTTBCCCHHHHHHHHHHHHH
T ss_pred CCCcEEEec--CCchHHHHHHHHHHHHHcCCCEEEEcC--CCCccCCCCCHHHHHHHHHHHHH
Confidence 356777765 667788887744 446999888877 555 23333333444444433
No 98
>1uta_A FTSN, MSGA, cell division protein FTSN; bacterial cell division protein, RNP domain, transmembrane, inner membrane, repeat; NMR {Escherichia coli} SCOP: d.58.52.1
Probab=25.34 E-value=44 Score=24.28 Aligned_cols=17 Identities=29% Similarity=0.239 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHhccCCC
Q 018479 16 CIQAEELRKSLWEKNLP 32 (355)
Q Consensus 16 ~~qa~~l~~~L~~~~~~ 32 (355)
++.|+.+.+.|...|.+
T Consensus 20 ~~~A~~l~~~L~~~G~~ 36 (81)
T 1uta_A 20 AEQAETVRAQLAFEGFD 36 (81)
T ss_dssp HHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHhCCCC
Confidence 34566667777655543
No 99
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=25.32 E-value=2.1e+02 Score=26.93 Aligned_cols=66 Identities=17% Similarity=0.240 Sum_probs=43.8
Q ss_pred CCcHHHHHHHH---HhcCCceEEEEcceecc-cchhhHHHHHHHHHHHHH-hcCCceEE-EcC--CCCCCHHHHHHH
Q 018479 190 KPYTDETIIKL---GQKGVKSLLAVPISFVS-EHIETLEEIDVEYKELAL-KSGIEKWG-RVP--ALGCEATFISDL 258 (355)
Q Consensus 190 ~P~~~d~l~~L---~~~G~k~VvVvP~gFvs-D~lETl~eid~e~~e~a~-~~G~~~~~-rv~--~ln~~p~fi~~L 258 (355)
..+|.++++.. .+.|++.|+|+||.|.- -.-|-+++ -++.+++ ..++.-+. -+| -.+-+++.+..|
T Consensus 101 ~~st~eai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~---~f~~IA~aa~~lPiilYn~P~tg~~l~~e~~~~L 174 (344)
T 2hmc_A 101 AVNTASAVAHAVHAQKVGAKGLMVIPRVLSRGSVIAAQKA---HFKAILSAAPEIPAVIYNSPYYGFATRADLFFAL 174 (344)
T ss_dssp CSSHHHHHHHHHHHHHHTCSEEEECCCCSSSTTCHHHHHH---HHHHHHHHSTTSCEEEEEBGGGTBCCCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhcCCCEEEECCCccCCCCCHHHHHH---HHHHHHhhCCCCcEEEEecCccCCCcCHHHHHHH
Confidence 57888887664 44699999999988766 44455554 5677887 55554232 344 235677777666
No 100
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=25.07 E-value=1.3e+02 Score=26.91 Aligned_cols=41 Identities=17% Similarity=0.247 Sum_probs=27.0
Q ss_pred HHHHHHHHHhcccccCCceeEEEEecccCCCCCCCcHHHHHHHHHhcCCceEEEE
Q 018479 157 ECVDLIMEELEKRKITNAYTLAYQSRVGPVEWLKPYTDETIIKLGQKGVKSLLAV 211 (355)
Q Consensus 157 ~ta~~v~e~l~~~~~~~~~~l~fQS~~G~~~Wl~P~~~d~l~~L~~~G~k~VvVv 211 (355)
.-.+.+.+++|.. .+.+. |-. +.++.++++.+.|.+.+++.
T Consensus 106 ~r~e~vc~~~gl~------~~~PL-------W~~-d~~~Ll~e~i~~G~~aiiv~ 146 (237)
T 3rjz_A 106 KRIEKVAKELGLE------VYTPA-------WGR-DAKEYMRELLNLGFKIMVVG 146 (237)
T ss_dssp HHHHHHHHHTTCE------EECSS-------SSC-CHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCE------EEccc-------cCC-CHHHHHHHHHHCCCEEEEEE
Confidence 3445666677643 23322 544 46779999999999887775
No 101
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=24.73 E-value=57 Score=28.43 Aligned_cols=51 Identities=24% Similarity=0.292 Sum_probs=34.3
Q ss_pred CCCCCCcHHHHHHHHHhcCCceEEEEcc--eecccchhhHHHHHHHH-HHHHHhcCCc
Q 018479 186 VEWLKPYTDETIIKLGQKGVKSLLAVPI--SFVSEHIETLEEIDVEY-KELALKSGIE 240 (355)
Q Consensus 186 ~~Wl~P~~~d~l~~L~~~G~k~VvVvP~--gFvsD~lETl~eid~e~-~e~a~~~G~~ 240 (355)
.-|+.|-+.+-+.+|.+.| +.|+|+ ||..+ .+++.|+-... .+.....|++
T Consensus 123 ~m~~~~~~~~N~~~L~~~G---~~ivpp~~g~~~~-p~~i~~~v~~~v~r~ld~~~i~ 176 (197)
T 1sbz_A 123 EMPLSTIHLENMLALSRMG---VAMVPPMPAFYNH-PETVDDIVHHVVARVLDQFGLE 176 (197)
T ss_dssp CSSBCHHHHHHHHHHHTTT---CEECCCCCCCTTC-CCBHHHHHHHHHHHHHGGGTCC
T ss_pred CCCCCHHHHHHHHHHHHCC---CEEECCCCcccCC-CCCHHHHHHHHHHHHHHhCCCC
Confidence 4599999999999999988 577775 67776 34444443333 3444555654
No 102
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=24.31 E-value=2.4e+02 Score=25.98 Aligned_cols=53 Identities=23% Similarity=0.174 Sum_probs=33.0
Q ss_pred CCCceEEEeeecCCCCHHHHHHHH---HHcCCCEEEEeecCccccccchHHHHHHHHHHHH
Q 018479 30 NLPAKVYVGMRYWHPFTEEAIEQI---KRDGITKLVVLPLYPQFSISTSGSSLRLLESIFR 87 (355)
Q Consensus 30 ~~~~~V~~amry~~P~i~~~l~~l---~~~G~~~IvvlPlyPqyS~~ttgs~~~~~~e~~~ 87 (355)
+..++|..+- +. ++.++++.. .+.|++-++++|= .|...|-....+.+.++.+
T Consensus 79 ~grvpViaGv--g~-~t~~ai~la~~A~~~Gadavlv~~P--~y~~~s~~~l~~~f~~va~ 134 (316)
T 3e96_A 79 HGRALVVAGI--GY-ATSTAIELGNAAKAAGADAVMIHMP--IHPYVTAGGVYAYFRDIIE 134 (316)
T ss_dssp TTSSEEEEEE--CS-SHHHHHHHHHHHHHHTCSEEEECCC--CCSCCCHHHHHHHHHHHHH
T ss_pred CCCCcEEEEe--Cc-CHHHHHHHHHHHHhcCCCEEEEcCC--CCCCCCHHHHHHHHHHHHH
Confidence 3467888887 34 899998854 4469999988732 2333344444444444443
No 103
>2nly_A BH1492 protein, divergent polysaccharide deacetylase hypothetical; PFAM04748, structural PSI, protein structure initiative; 2.50A {Bacillus halodurans} SCOP: c.6.2.7
Probab=24.19 E-value=3.8e+02 Score=23.87 Aligned_cols=88 Identities=17% Similarity=0.234 Sum_probs=56.2
Q ss_pred CCceEEEeeecCCCCHHHHHHHHHHcCCCEEEEeecCccc------------cccchHHHHHHHHHHHHhccccCCceeE
Q 018479 31 LPAKVYVGMRYWHPFTEEAIEQIKRDGITKLVVLPLYPQF------------SISTSGSSLRLLESIFREDEYLVNMQHT 98 (355)
Q Consensus 31 ~~~~V~~amry~~P~i~~~l~~l~~~G~~~IvvlPlyPqy------------S~~ttgs~~~~~~e~~~~~~~~~~~~~~ 98 (355)
.+++|.+|+-=..|+..+..+..++.|.+=++-+||=|.. ...+.....+.+..++.......++.=+
T Consensus 26 Lp~pvT~Ai~P~~p~~~~~a~~A~~~G~EvllHlPMep~~~~~~~~gp~~L~~~~s~~ei~~~l~~al~~vP~a~GvnNH 105 (245)
T 2nly_A 26 GEIPVTVAVMPFLEHSTKQAEIAQAAGLEVIVHMPLEPKKGKISWLGPSGITSNLSVGEVKSRVRKAFDDIPYAVGLNNH 105 (245)
T ss_dssp CSSCEEEEECSSSTTHHHHHHHHHHTTCEEEEEEEECCC--------CCCBCTTCCHHHHHHHHHHHHHHSTTCCEEEEE
T ss_pred CCCCeEEEECCCCCCHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCcccCcCCCCHHHHHHHHHHHHHHCCCcEEEecc
Confidence 3678999976667999999999999999999999997752 1122222233334444333323334445
Q ss_pred EecCCCCChHHHHHHHHHHH
Q 018479 99 VIPSWYQREGYITAMANLIE 118 (355)
Q Consensus 99 ~i~~~~~~p~yi~a~~~~I~ 118 (355)
.+..|-.++.-.+.+.+.++
T Consensus 106 mGS~~T~~~~~m~~vm~~l~ 125 (245)
T 2nly_A 106 MGSKIVENEKIMRAILEVVK 125 (245)
T ss_dssp ECTTGGGCHHHHHHHHHHHH
T ss_pred cccchhcCHHHHHHHHHHHH
Confidence 66677777766665554443
No 104
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=23.73 E-value=60 Score=28.54 Aligned_cols=50 Identities=18% Similarity=0.253 Sum_probs=34.0
Q ss_pred CCCCCCcHHHHHHHHHhcCCceEEEEcc--eecccchhhHHHHHHHH-HHHHHhcCC
Q 018479 186 VEWLKPYTDETIIKLGQKGVKSLLAVPI--SFVSEHIETLEEIDVEY-KELALKSGI 239 (355)
Q Consensus 186 ~~Wl~P~~~d~l~~L~~~G~k~VvVvP~--gFvsD~lETl~eid~e~-~e~a~~~G~ 239 (355)
.-|+.|-+.+-+.+|.+.|+ +|+|+ ||.. +.+|+.||-... .+.....|+
T Consensus 140 em~~~~~~~~Nm~~L~~~G~---~iipp~~g~ya-~p~~iediv~~vv~r~ld~lgi 192 (209)
T 3zqu_A 140 EAPFSSIHLENMLKLSNLGA---VILPAAPGFYH-QPQSVEDLVDFVVARILNTLGI 192 (209)
T ss_dssp CSSCCHHHHHHHHHHHHHTC---EECCSCCCCTT-CCCSHHHHHHHHHHHHHHHHTC
T ss_pred ccccCHHHHHHHHHHHHCCC---EEeCCCccccc-CCCCHHHHHHHHHHHHHHhCCC
Confidence 67999999999999999885 57774 7765 555666644333 333344454
No 105
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=22.79 E-value=3.7e+02 Score=24.57 Aligned_cols=55 Identities=13% Similarity=0.163 Sum_probs=37.5
Q ss_pred cCCCCChHHHHHHHHHHHHHHHhCCCCCceEEEEeeCCCchhhhcccCCchHHHHHHHHHHHHHHhc
Q 018479 101 PSWYQREGYITAMANLIEKELQNFDSPEQVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELE 167 (355)
Q Consensus 101 ~~~~~~p~yi~a~~~~I~~~l~~~~~~~~~~llfsaHgiP~~~v~~~GDpY~~~~~~ta~~v~e~l~ 167 (355)
+++|-+|.....+++.|.++|.+.+..... .+- .+.+.|..++.++-+.+++.+.
T Consensus 132 PHvWldp~n~~~~a~~I~~~L~~~DP~~a~-----------~Y~-~N~~~~~~~L~~Ld~~~~~~l~ 186 (312)
T 2o1e_A 132 PHVWLSPVLAQKEVKNITAQIVKQDPDNKE-----------YYE-KNSKEYIAKLQDLDKLYRTTAK 186 (312)
T ss_dssp CGGGGSHHHHHHHHHHHHHHHHHHCGGGHH-----------HHH-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcccCHHHHHHHHHHHHHHHHHhCchhHH-----------HHH-HHHHHHHHHHHHHHHHHHHHhh
Confidence 578999999999999999999876421110 111 3345577777777777777663
No 106
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=22.72 E-value=3.5e+02 Score=24.37 Aligned_cols=51 Identities=22% Similarity=0.277 Sum_probs=33.0
Q ss_pred CceEEEeeecCCCCHHHHHHHHHH---cCCCEEEEeecCccccccchHHHHHHHHHHH
Q 018479 32 PAKVYVGMRYWHPFTEEAIEQIKR---DGITKLVVLPLYPQFSISTSGSSLRLLESIF 86 (355)
Q Consensus 32 ~~~V~~amry~~P~i~~~l~~l~~---~G~~~IvvlPlyPqyS~~ttgs~~~~~~e~~ 86 (355)
.++|..+- +..++.++++..+. .|++-++++| |.|...|-....+.+.+..
T Consensus 70 r~pviaGv--g~~~t~~ai~la~~a~~~Gadavlv~~--P~y~~~s~~~l~~~f~~ia 123 (292)
T 2ojp_A 70 RIPVIAGT--GANATAEAISLTQRFNDSGIVGCLTVT--PYYNRPSQEGLYQHFKAIA 123 (292)
T ss_dssp SSCEEEEC--CCSSHHHHHHHHHHTTTSSCSEEEEEC--CCSSCCCHHHHHHHHHHHH
T ss_pred CCcEEEec--CCccHHHHHHHHHHHHhcCCCEEEECC--CCCCCCCHHHHHHHHHHHH
Confidence 56677664 67789999886654 5999888876 4455555544444444443
No 107
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=22.49 E-value=59 Score=30.13 Aligned_cols=43 Identities=14% Similarity=0.178 Sum_probs=29.4
Q ss_pred CcHHHHHHHHHhcCCceEEEEcceecccchhhHHHHHHHHHHHHHhc-CCc
Q 018479 191 PYTDETIIKLGQKGVKSLLAVPISFVSEHIETLEEIDVEYKELALKS-GIE 240 (355)
Q Consensus 191 P~~~d~l~~L~~~G~k~VvVvP~gFvsD~lETl~eid~e~~e~a~~~-G~~ 240 (355)
+...++++++.+.|++.++++..||-.+. ..+..+.+++. |+.
T Consensus 82 ~~~~~~~~e~i~~Gi~~iv~~t~G~~~~~-------~~~l~~~a~~~~gi~ 125 (305)
T 2fp4_A 82 PFAAAAINEAIDAEVPLVVCITEGIPQQD-------MVRVKHRLLRQGKTR 125 (305)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCCCCCHHH-------HHHHHHHHTTCSSCE
T ss_pred HHHHHHHHHHHHCCCCEEEEECCCCChHH-------HHHHHHHHHhcCCcE
Confidence 56677888888888888888888874221 12466777777 653
No 108
>1t5b_A Acyl carrier protein phosphodiesterase; structural genomics, FMN, alpha/beta/alpha sandwich, PSI, protein structure initiative; HET: FMN; 1.40A {Salmonella typhimurium} SCOP: c.23.5.3 PDB: 1tik_A 2z98_A* 2d5i_A* 1v4b_A* 2z9b_A* 2z9c_A* 2z9d_A*
Probab=22.12 E-value=3.2e+02 Score=22.24 Aligned_cols=31 Identities=16% Similarity=0.032 Sum_probs=22.3
Q ss_pred CCCch--hHHHHHHHHHHHHHHhccCCCceEEE
Q 018479 7 LVLSL--AIISCIQAEELRKSLWEKNLPAKVYV 37 (355)
Q Consensus 7 ggSPL--~~~t~~qa~~l~~~L~~~~~~~~V~~ 37 (355)
-+||- +..|+..++.+.+.+.+.|.+..|..
T Consensus 8 ~~S~~~~~s~t~~la~~~~~~l~~~g~~~~v~~ 40 (201)
T 1t5b_A 8 KSSILAGYSQSGQLTDYFIEQWREKHVADEITV 40 (201)
T ss_dssp ECCSSGGGCHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred EeCCCCCCChHHHHHHHHHHHHHHhCCCCeEEE
Confidence 46777 47899999999999987653334444
No 109
>3ojc_A Putative aspartate/glutamate racemase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; 1.75A {Yersinia pestis}
Probab=21.73 E-value=1.3e+02 Score=26.48 Aligned_cols=20 Identities=25% Similarity=0.345 Sum_probs=14.6
Q ss_pred CCHHHHHHHHHHcCCCEEEE
Q 018479 44 PFTEEAIEQIKRDGITKLVV 63 (355)
Q Consensus 44 P~i~~~l~~l~~~G~~~Ivv 63 (355)
+.+.+.++.|.+.|++-|++
T Consensus 63 ~~l~~~~~~L~~~g~~~ivi 82 (231)
T 3ojc_A 63 QLLSNAAISLKHAGAEVIVV 82 (231)
T ss_dssp HHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHhcCCCEEEE
Confidence 45667777888889986665
No 110
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=21.55 E-value=4.4e+02 Score=23.80 Aligned_cols=53 Identities=15% Similarity=0.099 Sum_probs=33.4
Q ss_pred CCceEEEeeecCCCCHHHHHHHH---HHcCCCEEEEeecCccccccchHHHHHHHHHHHH
Q 018479 31 LPAKVYVGMRYWHPFTEEAIEQI---KRDGITKLVVLPLYPQFSISTSGSSLRLLESIFR 87 (355)
Q Consensus 31 ~~~~V~~amry~~P~i~~~l~~l---~~~G~~~IvvlPlyPqyS~~ttgs~~~~~~e~~~ 87 (355)
..++|..+ -+..++.++++.. .+.|++-++++|- .|...|-....+.+.+..+
T Consensus 75 grvpviaG--vg~~~t~~ai~la~~a~~~Gadavlv~~P--~y~~~~~~~l~~~f~~va~ 130 (297)
T 3flu_A 75 KRVPVIAG--TGANNTVEAIALSQAAEKAGADYTLSVVP--YYNKPSQEGIYQHFKTIAE 130 (297)
T ss_dssp TSSCEEEE--CCCSSHHHHHHHHHHHHHTTCSEEEEECC--CSSCCCHHHHHHHHHHHHH
T ss_pred CCCcEEEe--CCCcCHHHHHHHHHHHHHcCCCEEEECCC--CCCCCCHHHHHHHHHHHHH
Confidence 35677775 3677899888844 4579999888763 3544454444444444444
No 111
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=21.43 E-value=4e+02 Score=24.20 Aligned_cols=53 Identities=13% Similarity=0.014 Sum_probs=33.6
Q ss_pred CCceEEEeeecCCCCHHHHHHHH---HHcCCCEEEEeecCccccccchHHHHHHHHHHHH
Q 018479 31 LPAKVYVGMRYWHPFTEEAIEQI---KRDGITKLVVLPLYPQFSISTSGSSLRLLESIFR 87 (355)
Q Consensus 31 ~~~~V~~amry~~P~i~~~l~~l---~~~G~~~IvvlPlyPqyS~~ttgs~~~~~~e~~~ 87 (355)
..++|..+- +..++.++++.. .+.|++-++++|- .|...|-....+.+.++.+
T Consensus 79 grvpViaGv--g~~~t~~ai~la~~A~~~Gadavlv~~P--~y~~~s~~~l~~~f~~va~ 134 (303)
T 2wkj_A 79 GKIKLIAHV--GCVSTAESQQLAASAKRYGFDAVSAVTP--FYYPFSFEEHCDHYRAIID 134 (303)
T ss_dssp TTSEEEEEC--CCSSHHHHHHHHHHHHHHTCSEEEEECC--CSSCCCHHHHHHHHHHHHH
T ss_pred CCCcEEEec--CCCCHHHHHHHHHHHHhCCCCEEEecCC--CCCCCCHHHHHHHHHHHHH
Confidence 357777764 667888888754 4469998888764 4555555444444444443
No 112
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=21.04 E-value=4.2e+02 Score=23.83 Aligned_cols=53 Identities=21% Similarity=0.227 Sum_probs=33.5
Q ss_pred CCceEEEeeecCCCCHHHHHHHH---HHcCCCEEEEeecCccccccchHHHHHHHHHHHH
Q 018479 31 LPAKVYVGMRYWHPFTEEAIEQI---KRDGITKLVVLPLYPQFSISTSGSSLRLLESIFR 87 (355)
Q Consensus 31 ~~~~V~~amry~~P~i~~~l~~l---~~~G~~~IvvlPlyPqyS~~ttgs~~~~~~e~~~ 87 (355)
..++|..+- +..++.++++.. .+.|++-++++| |.|...|-....+.+.+..+
T Consensus 68 gr~pviaGv--g~~~t~~ai~la~~a~~~Gadavlv~~--P~y~~~s~~~l~~~f~~ia~ 123 (289)
T 2yxg_A 68 GRVQVIAGA--GSNCTEEAIELSVFAEDVGADAVLSIT--PYYNKPTQEGLRKHFGKVAE 123 (289)
T ss_dssp TSSEEEEEC--CCSSHHHHHHHHHHHHHHTCSEEEEEC--CCSSCCCHHHHHHHHHHHHH
T ss_pred CCCcEEEeC--CCCCHHHHHHHHHHHHhcCCCEEEECC--CCCCCCCHHHHHHHHHHHHH
Confidence 356777664 567788888754 446999888876 44555555444554544443
No 113
>3e2v_A 3'-5'-exonuclease; structural genomics, hydrolase, PSI-2, protein initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.50A {Saccharomyces cerevisiae}
Probab=20.98 E-value=78 Score=30.75 Aligned_cols=31 Identities=16% Similarity=0.214 Sum_probs=26.2
Q ss_pred EEeeecCCCCHHHHHHHHHHcCCCEEEEeec
Q 018479 36 YVGMRYWHPFTEEAIEQIKRDGITKLVVLPL 66 (355)
Q Consensus 36 ~~amry~~P~i~~~l~~l~~~G~~~IvvlPl 66 (355)
|-+.+|..+.++++|+++.+.|++++++.-.
T Consensus 30 y~~~~~h~~D~~~vl~rA~~~GV~~ii~~g~ 60 (401)
T 3e2v_A 30 YNGKQYHPADYVKLLERAAQRHVKNALVTGS 60 (401)
T ss_dssp ETTEECSCCCHHHHHHHHHHTTEEEEEECCC
T ss_pred ccccccCccCHHHHHHHHHHCCCCEEEEecC
Confidence 4456777899999999999999999998655
No 114
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=20.96 E-value=91 Score=28.44 Aligned_cols=42 Identities=14% Similarity=0.315 Sum_probs=30.6
Q ss_pred CcHHHHHHHHHhcCCceEEEEcceecccchhhHHHHHHHHHHHHHhcCC
Q 018479 191 PYTDETIIKLGQKGVKSLLAVPISFVSEHIETLEEIDVEYKELALKSGI 239 (355)
Q Consensus 191 P~~~d~l~~L~~~G~k~VvVvP~gFvsD~lETl~eid~e~~e~a~~~G~ 239 (355)
+...+.++++.+.|++.+++++.||..+. ..+..+.+++.|+
T Consensus 75 ~~~~~~~~ea~~~Gi~~iVi~t~G~~~~~-------~~~l~~~A~~~gv 116 (288)
T 2nu8_A 75 PFCKDSILEAIDAGIKLIITITEGIPTLD-------MLTVKVKLDEAGV 116 (288)
T ss_dssp GGHHHHHHHHHHTTCSEEEECCCCCCHHH-------HHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHCCCCEEEEECCCCCHHH-------HHHHHHHHHHcCC
Confidence 67888999999999877788888884322 1245667777776
No 115
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=20.85 E-value=4.1e+02 Score=23.75 Aligned_cols=28 Identities=11% Similarity=0.030 Sum_probs=20.6
Q ss_pred eeecCCCCHHHHHHHHHHcCCCEEEEee
Q 018479 38 GMRYWHPFTEEAIEQIKRDGITKLVVLP 65 (355)
Q Consensus 38 amry~~P~i~~~l~~l~~~G~~~IvvlP 65 (355)
+...++|..+++++++.+.|+++++++.
T Consensus 61 av~~G~~~~~~~lr~ala~GaD~vi~v~ 88 (264)
T 1o97_C 61 VVSVGPDRVDESLRKCLAKGADRAVRVW 88 (264)
T ss_dssp EEEESCGGGHHHHHHHHHTTCSEEEEEC
T ss_pred EEEeCchhHHHHHHHHHhcCCCEEEEEc
Confidence 4455666677888888778888888875
No 116
>3t5s_A Gilaa.00834.A, macrophage migration inhibitory factor; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.30A {Giardia lamblia}
Probab=20.84 E-value=1.9e+02 Score=23.14 Aligned_cols=73 Identities=5% Similarity=0.069 Sum_probs=42.2
Q ss_pred CChHHHHHHHHHHHHHHHhC-CCCCceEEEEeeCCCchhhhcccCCc----------------hHHHHHHHHHHHHHHhc
Q 018479 105 QREGYITAMANLIEKELQNF-DSPEQVMIFFSAHGVPLAYVEEAGDP----------------YKAEMEECVDLIMEELE 167 (355)
Q Consensus 105 ~~p~yi~a~~~~I~~~l~~~-~~~~~~~llfsaHgiP~~~v~~~GDp----------------Y~~~~~~ta~~v~e~l~ 167 (355)
..+...+++.+.+.+++.+. ++|++ .+.++.|+.++.+- +..|| ..+-.+++++.+.+.|+
T Consensus 33 ~~~~~~~~l~~~ls~~la~~lgKPe~-~vmV~v~~~~m~fg-Gs~dp~a~v~i~sig~~t~e~n~~~s~~i~~~l~~~Lg 110 (135)
T 3t5s_A 33 FTKDQADAFCLDMGQVLAKETGKPVS-YCMAGVRKADMSFG-TSTDLCCFVDFYCIGVISQAKNPSISAAITGCLTQHFK 110 (135)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHCSCGG-GCEEEEEECCCCBT-TBCCSCEEEEEECCC-----CCHHHHHHHHHHHHHHHC
T ss_pred cchhccchhHHHHHHHHHHhhCCchH-HHHhhhhhhhcccC-cccceEEEEEEEEEEEEeccCCchHHHHHHHHHHHhcc
Confidence 33444566666665555432 33332 33334446666654 33344 34566778888888888
Q ss_pred ccccCCceeEEEEe
Q 018479 168 KRKITNAYTLAYQS 181 (355)
Q Consensus 168 ~~~~~~~~~l~fQS 181 (355)
.+. .++.+.|..
T Consensus 111 i~~--~riyI~f~d 122 (135)
T 3t5s_A 111 VKP--ERVYISFNE 122 (135)
T ss_dssp CCG--GGEEEEEEC
T ss_pred cCc--cEEEEEecc
Confidence 764 358888865
No 117
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=20.71 E-value=4.6e+02 Score=23.60 Aligned_cols=53 Identities=13% Similarity=-0.013 Sum_probs=33.0
Q ss_pred CCceEEEeeecCCCCHHHHHHHHH---HcCCCEEEEeecCccccccchHHHHHHHHHHHH
Q 018479 31 LPAKVYVGMRYWHPFTEEAIEQIK---RDGITKLVVLPLYPQFSISTSGSSLRLLESIFR 87 (355)
Q Consensus 31 ~~~~V~~amry~~P~i~~~l~~l~---~~G~~~IvvlPlyPqyS~~ttgs~~~~~~e~~~ 87 (355)
..++|..+- +..++.++++..+ +.|++-++++|- .|...|-....+.+....+
T Consensus 72 grvpviaGv--g~~~t~~ai~la~~a~~~Gadavlv~~P--~y~~~~~~~l~~~f~~va~ 127 (293)
T 1f6k_A 72 DQIALIAQV--GSVNLKEAVELGKYATELGYDCLSAVTP--FYYKFSFPEIKHYYDTIIA 127 (293)
T ss_dssp TSSEEEEEC--CCSCHHHHHHHHHHHHHHTCSEEEEECC--CSSCCCHHHHHHHHHHHHH
T ss_pred CCCeEEEec--CCCCHHHHHHHHHHHHhcCCCEEEECCC--CCCCCCHHHHHHHHHHHHH
Confidence 356777664 6678888887543 469998888764 4555554444444444443
No 118
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=20.68 E-value=5.6e+02 Score=24.50 Aligned_cols=134 Identities=16% Similarity=0.196 Sum_probs=69.9
Q ss_pred HHHHHHHHHHHHHHHhCCCCCceEEEEeeCCCchhhhcccCCc-h--HHHHHHHHHHHHHHhcccccCCceeEEEEeccc
Q 018479 108 GYITAMANLIEKELQNFDSPEQVMIFFSAHGVPLAYVEEAGDP-Y--KAEMEECVDLIMEELEKRKITNAYTLAYQSRVG 184 (355)
Q Consensus 108 ~yi~a~~~~I~~~l~~~~~~~~~~llfsaHgiP~~~v~~~GDp-Y--~~~~~~ta~~v~e~l~~~~~~~~~~l~fQS~~G 184 (355)
.|++.+.+.|+...+......-..+.| ..|.| + ..++.++.+.+.+..+... ...++..++
T Consensus 84 ~~~~~l~~Ei~~~~~~~~~~~i~~i~f-----------gGGtpt~l~~~~l~~ll~~i~~~~~~~~---~~eitie~~-- 147 (457)
T 1olt_A 84 QYLDALEQEIVHRAPLFAGRHVSQLHW-----------GGGTPTYLNKAQISRLMKLLRENFQFNA---DAEISIEVD-- 147 (457)
T ss_dssp HHHHHHHHHHHHHGGGGTTCCEEEEEE-----------EESCGGGSCHHHHHHHHHHHHHHSCEEE---EEEEEEEEC--
T ss_pred HHHHHHHHHHHHHHHhcCCCceEEEEE-----------eCCCcccCCHHHHHHHHHHHHHhCCCCC---CcEEEEEEc--
Confidence 466667666665544332211123334 23444 2 5678888888887654321 245555443
Q ss_pred CCCCCCCc--HHHHHHHHHhcCCceEEEEcceecc-cchhhH-----HHHHHHHHHHHHhcCCc--eEEEc-CCCCCCHH
Q 018479 185 PVEWLKPY--TDETIIKLGQKGVKSLLAVPISFVS-EHIETL-----EEIDVEYKELALKSGIE--KWGRV-PALGCEAT 253 (355)
Q Consensus 185 ~~~Wl~P~--~~d~l~~L~~~G~k~VvVvP~gFvs-D~lETl-----~eid~e~~e~a~~~G~~--~~~rv-~~ln~~p~ 253 (355)
|+ +++.++.|.+.|+.+|-+ .+--++ +.++.+ .+--.++-+.+++.|+. ....+ -.++.+.+
T Consensus 148 ------p~~l~~e~l~~L~~~G~~risl-GvQS~~~~~l~~i~R~~~~~~~~~ai~~~r~~G~~~v~~dlI~GlPget~e 220 (457)
T 1olt_A 148 ------PREIELDVLDHLRAEGFNRLSM-GVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQTPE 220 (457)
T ss_dssp ------SSSCCTHHHHHHHHTTCCEEEE-EEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTTCCSCEEEEEESCTTCCHH
T ss_pred ------cCcCCHHHHHHHHHcCCCEEEE-eeccCCHHHHHHhCCCCCHHHHHHHHHHHHHcCCCcEEEEEEcCCCCCCHH
Confidence 32 467888888889866553 443332 222222 12222344566677875 23333 34577765
Q ss_pred HHHHHHHHHHH
Q 018479 254 FISDLADAVIE 264 (355)
Q Consensus 254 fi~~La~~V~e 264 (355)
-+....+.+.+
T Consensus 221 ~~~~tl~~~~~ 231 (457)
T 1olt_A 221 SFAFTLKRVAE 231 (457)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 55544555544
No 119
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=20.64 E-value=4.6e+02 Score=23.60 Aligned_cols=53 Identities=21% Similarity=0.207 Sum_probs=34.1
Q ss_pred CCceEEEeeecCCCCHHHHHHHH---HHcCCCEEEEeecCccccccchHHHHHHHHHHHH
Q 018479 31 LPAKVYVGMRYWHPFTEEAIEQI---KRDGITKLVVLPLYPQFSISTSGSSLRLLESIFR 87 (355)
Q Consensus 31 ~~~~V~~amry~~P~i~~~l~~l---~~~G~~~IvvlPlyPqyS~~ttgs~~~~~~e~~~ 87 (355)
..++|..+- +..++.++++.. .+.|++-++++| |.|...|-....+.+.+..+
T Consensus 68 grvpviaGv--g~~~t~~ai~la~~A~~~Gadavlv~~--P~y~~~s~~~l~~~f~~va~ 123 (294)
T 2ehh_A 68 GRIKVIAGT--GGNATHEAVHLTAHAKEVGADGALVVV--PYYNKPTQRGLYEHFKTVAQ 123 (294)
T ss_dssp TSSEEEEEC--CCSCHHHHHHHHHHHHHTTCSEEEEEC--CCSSCCCHHHHHHHHHHHHH
T ss_pred CCCcEEEec--CCCCHHHHHHHHHHHHhcCCCEEEECC--CCCCCCCHHHHHHHHHHHHH
Confidence 356777664 567889888754 446999888876 44555555444444544443
No 120
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=20.38 E-value=1.4e+02 Score=22.67 Aligned_cols=61 Identities=13% Similarity=0.120 Sum_probs=39.4
Q ss_pred CCCcHHHHHHHHHhcCCceEEEEcce-----ecccchhhHHHHHHHHHHHHHhcCCceEEEcCCCCCCHHHHHHHHHH
Q 018479 189 LKPYTDETIIKLGQKGVKSLLAVPIS-----FVSEHIETLEEIDVEYKELALKSGIEKWGRVPALGCEATFISDLADA 261 (355)
Q Consensus 189 l~P~~~d~l~~L~~~G~k~VvVvP~g-----FvsD~lETl~eid~e~~e~a~~~G~~~~~rv~~ln~~p~fi~~La~~ 261 (355)
+.|.+.+.++++.+.. +|+|+--+ ....|- .++++..+.|+. |..+... .++...+.|.++
T Consensus 3 ~s~~~~~~v~~~i~~~--~Vvvy~k~t~~~p~Cp~C~--------~ak~~L~~~gi~-~~~~dI~-~~~~~~~~l~~~ 68 (109)
T 3ipz_A 3 LTPQLKDTLEKLVNSE--KVVLFMKGTRDFPMCGFSN--------TVVQILKNLNVP-FEDVNIL-ENEMLRQGLKEY 68 (109)
T ss_dssp CCHHHHHHHHHHHTSS--SEEEEESBCSSSBSSHHHH--------HHHHHHHHTTCC-CEEEEGG-GCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHccC--CEEEEEecCCCCCCChhHH--------HHHHHHHHcCCC-cEEEECC-CCHHHHHHHHHH
Confidence 4688888888888754 57776544 455555 356777777875 7766644 456655555443
No 121
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=20.34 E-value=3.9e+02 Score=24.37 Aligned_cols=52 Identities=19% Similarity=0.229 Sum_probs=33.5
Q ss_pred CCceEEEeeecCCCCHHHHHHHH---HHcCCCEEEEeecCccccccchHHHHHHHHHHH
Q 018479 31 LPAKVYVGMRYWHPFTEEAIEQI---KRDGITKLVVLPLYPQFSISTSGSSLRLLESIF 86 (355)
Q Consensus 31 ~~~~V~~amry~~P~i~~~l~~l---~~~G~~~IvvlPlyPqyS~~ttgs~~~~~~e~~ 86 (355)
..++|..+- +..++.++++.. .+.|++-++++| |.|...|-....+.+.++.
T Consensus 80 grvpViaGv--g~~st~~ai~la~~A~~~Gadavlv~~--P~y~~~s~~~l~~~f~~va 134 (306)
T 1o5k_A 80 GKIPVIVGA--GTNSTEKTLKLVKQAEKLGANGVLVVT--PYYNKPTQEGLYQHYKYIS 134 (306)
T ss_dssp TSSCEEEEC--CCSCHHHHHHHHHHHHHHTCSEEEEEC--CCSSCCCHHHHHHHHHHHH
T ss_pred CCCeEEEcC--CCccHHHHHHHHHHHHhcCCCEEEECC--CCCCCCCHHHHHHHHHHHH
Confidence 356777664 667889988755 346999888876 4455555544444444444
No 122
>2xio_A Putative deoxyribonuclease tatdn1; hydrolase; 1.19A {Homo sapiens}
Probab=20.27 E-value=1.5e+02 Score=26.67 Aligned_cols=27 Identities=11% Similarity=0.113 Sum_probs=22.2
Q ss_pred ecCCCCHHHHHHHHHHcCCCEEEEeec
Q 018479 40 RYWHPFTEEAIEQIKRDGITKLVVLPL 66 (355)
Q Consensus 40 ry~~P~i~~~l~~l~~~G~~~IvvlPl 66 (355)
.+.....+++++++.+.|+++++++..
T Consensus 23 ~~h~~d~~~vl~~~~~~GV~~~v~~~~ 49 (301)
T 2xio_A 23 QKHQDDLQDVIGRAVEIGVKKFMITGG 49 (301)
T ss_dssp ECSCCCHHHHHHHHHHHTEEEEEECCC
T ss_pred ccCccCHHHHHHHHHHCCCCEEEEeCC
Confidence 344578899999999999999998644
No 123
>3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infect disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1}
Probab=20.09 E-value=1.2e+02 Score=28.44 Aligned_cols=28 Identities=11% Similarity=0.374 Sum_probs=23.7
Q ss_pred ecCCCCHHHHHHHHHHcCCCEEEEeecC
Q 018479 40 RYWHPFTEEAIEQIKRDGITKLVVLPLY 67 (355)
Q Consensus 40 ry~~P~i~~~l~~l~~~G~~~IvvlPly 67 (355)
.|..+.++++++++.+.|+++++++-..
T Consensus 48 ~~h~~d~~~vl~rA~~aGV~~ii~~g~~ 75 (325)
T 3ipw_A 48 HYHEEDIDVVLQRAERNGLSHIIITSGC 75 (325)
T ss_dssp ECSCCCHHHHHHHHHHTTEEEEEECCCS
T ss_pred cccccCHHHHHHHHHHcCCcEEEEccCC
Confidence 3447889999999999999999997664
Done!