Query 018483
Match_columns 355
No_of_seqs 253 out of 1696
Neff 9.3
Searched_HMMs 46136
Date Fri Mar 29 09:24:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018483.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018483hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02410 UDP-glucoronosyl/UDP- 100.0 5.1E-63 1.1E-67 472.0 34.0 342 10-355 105-451 (451)
2 PLN02207 UDP-glycosyltransfera 100.0 5.9E-61 1.3E-65 457.7 32.5 339 10-355 115-466 (468)
3 PLN02992 coniferyl-alcohol glu 100.0 1.1E-60 2.4E-65 456.7 33.5 340 10-355 104-470 (481)
4 PLN02555 limonoid glucosyltran 100.0 3.4E-60 7.5E-65 454.3 33.0 339 10-354 116-469 (480)
5 PLN00164 glucosyltransferase; 100.0 1.9E-59 4.2E-64 451.7 33.6 342 10-354 110-473 (480)
6 PLN03015 UDP-glucosyl transfer 100.0 2.2E-59 4.7E-64 445.4 33.4 337 10-353 107-467 (470)
7 PLN02562 UDP-glycosyltransfera 100.0 4.2E-59 9E-64 446.1 32.3 334 10-353 103-448 (448)
8 PLN03004 UDP-glycosyltransfera 100.0 2.5E-59 5.3E-64 445.2 29.0 329 10-343 112-450 (451)
9 PLN02173 UDP-glucosyl transfer 100.0 8.9E-59 1.9E-63 441.1 31.1 325 10-353 104-447 (449)
10 PLN02863 UDP-glucoronosyl/UDP- 100.0 1.8E-58 3.8E-63 443.7 33.3 343 10-355 114-472 (477)
11 PLN02210 UDP-glucosyl transfer 100.0 1.4E-58 3.1E-63 443.0 31.7 334 9-353 102-454 (456)
12 PLN02534 UDP-glycosyltransfera 100.0 4.3E-58 9.3E-63 440.5 33.4 341 10-354 119-486 (491)
13 PLN02152 indole-3-acetate beta 100.0 2.9E-58 6.2E-63 438.3 31.3 330 10-353 106-455 (455)
14 PLN02167 UDP-glycosyltransfera 100.0 3.7E-58 8E-63 443.5 32.4 339 10-354 118-472 (475)
15 PLN02554 UDP-glycosyltransfera 100.0 7.5E-58 1.6E-62 442.0 32.2 337 10-354 112-478 (481)
16 PLN03007 UDP-glucosyltransfera 100.0 7.7E-58 1.7E-62 442.4 31.7 342 8-355 120-481 (482)
17 PLN02670 transferase, transfer 100.0 2.1E-57 4.6E-62 433.7 33.9 339 10-354 110-465 (472)
18 PLN02764 glycosyltransferase f 100.0 5.8E-57 1.3E-61 427.5 32.8 323 10-354 108-445 (453)
19 PLN02208 glycosyltransferase f 100.0 4.3E-57 9.4E-62 430.2 30.1 322 9-355 106-440 (442)
20 PLN02448 UDP-glycosyltransfera 100.0 2.9E-56 6.3E-61 429.3 32.5 334 9-354 107-457 (459)
21 PLN00414 glycosyltransferase f 100.0 2.1E-55 4.6E-60 419.1 30.4 321 9-354 106-440 (446)
22 PHA03392 egt ecdysteroid UDP-g 100.0 5.2E-48 1.1E-52 374.7 25.6 297 8-333 134-448 (507)
23 PF00201 UDPGT: UDP-glucoronos 100.0 8.1E-50 1.8E-54 391.6 0.6 296 9-334 118-426 (500)
24 KOG1192 UDP-glucuronosyl and U 100.0 5.1E-38 1.1E-42 308.0 18.4 297 10-333 114-438 (496)
25 TIGR01426 MGT glycosyltransfer 100.0 6.5E-33 1.4E-37 263.9 24.0 295 7-352 89-390 (392)
26 cd03784 GT1_Gtf_like This fami 100.0 7.9E-31 1.7E-35 250.4 20.5 156 156-332 228-386 (401)
27 COG1819 Glycosyl transferases, 100.0 3.2E-29 7E-34 237.3 15.5 168 135-333 215-384 (406)
28 PRK12446 undecaprenyldiphospho 99.8 3.7E-17 8E-22 152.9 19.7 143 167-326 183-335 (352)
29 PF13528 Glyco_trans_1_3: Glyc 99.7 1.4E-16 3E-21 147.4 16.4 218 7-311 91-317 (318)
30 TIGR00661 MJ1255 conserved hyp 99.6 1.5E-14 3.4E-19 134.0 18.6 124 168-314 187-314 (321)
31 COG0707 MurG UDP-N-acetylgluco 99.6 6.1E-15 1.3E-19 136.9 12.8 147 168-328 182-339 (357)
32 PF04101 Glyco_tran_28_C: Glyc 99.6 1.8E-16 4E-21 132.7 0.7 135 171-315 1-145 (167)
33 cd03785 GT1_MurG MurG is an N- 99.4 9.8E-12 2.1E-16 116.4 16.7 148 167-324 179-335 (350)
34 PRK00726 murG undecaprenyldiph 99.3 2.6E-11 5.6E-16 114.1 14.1 166 168-353 182-356 (357)
35 PLN02605 monogalactosyldiacylg 99.3 3.8E-10 8.2E-15 107.2 21.4 166 167-353 204-380 (382)
36 TIGR00215 lpxB lipid-A-disacch 99.2 1.2E-10 2.7E-15 110.4 14.3 170 167-350 189-384 (385)
37 PRK13609 diacylglycerol glucos 99.2 6.9E-10 1.5E-14 105.3 19.1 134 167-315 200-339 (380)
38 TIGR03492 conserved hypothetic 99.2 1.8E-09 3.9E-14 102.7 20.9 279 10-350 93-394 (396)
39 PRK00025 lpxB lipid-A-disaccha 99.1 1.6E-09 3.5E-14 102.7 15.0 105 240-353 256-376 (380)
40 PRK13608 diacylglycerol glucos 99.1 3.5E-09 7.6E-14 100.9 16.4 163 167-352 200-369 (391)
41 TIGR01133 murG undecaprenyldip 98.9 7.9E-09 1.7E-13 96.6 12.1 75 238-315 243-322 (348)
42 cd03814 GT1_like_2 This family 98.9 1.5E-06 3.1E-11 80.9 24.7 158 169-352 196-363 (364)
43 TIGR03590 PseG pseudaminic aci 98.8 2.1E-08 4.5E-13 91.0 8.9 104 169-285 170-278 (279)
44 COG4671 Predicted glycosyl tra 98.6 7.9E-07 1.7E-11 80.2 13.6 182 107-313 167-364 (400)
45 PLN02871 UDP-sulfoquinovose:DA 98.5 5.5E-05 1.2E-09 73.8 24.2 140 171-328 264-415 (465)
46 PRK05749 3-deoxy-D-manno-octul 98.5 4.7E-05 1E-09 73.4 22.2 85 241-329 315-404 (425)
47 cd03817 GT1_UGDG_like This fam 98.4 0.00021 4.6E-09 66.3 24.4 148 169-330 201-360 (374)
48 KOG3349 Predicted glycosyltran 98.4 2.5E-06 5.3E-11 67.5 8.8 116 170-295 4-131 (170)
49 cd03800 GT1_Sucrose_synthase T 98.3 7.7E-05 1.7E-09 70.7 20.3 92 229-327 283-382 (398)
50 cd03798 GT1_wlbH_like This fam 98.3 0.00075 1.6E-08 62.4 26.0 111 229-354 259-376 (377)
51 cd05844 GT1_like_7 Glycosyltra 98.3 8.8E-05 1.9E-09 69.5 19.8 93 228-327 244-350 (367)
52 cd03801 GT1_YqgM_like This fam 98.3 0.00019 4.2E-09 66.1 21.8 81 228-315 255-342 (374)
53 cd03822 GT1_ecORF704_like This 98.2 0.00089 1.9E-08 62.2 23.1 93 229-329 247-350 (366)
54 TIGR03449 mycothiol_MshA UDP-N 98.1 0.00095 2.1E-08 63.7 23.0 93 229-328 283-383 (405)
55 cd03823 GT1_ExpE7_like This fa 98.1 9E-05 1.9E-09 68.6 15.4 134 168-316 189-331 (359)
56 PRK14089 ipid-A-disaccharide s 98.1 0.00023 5E-09 66.3 16.3 217 105-348 74-344 (347)
57 COG1519 KdtA 3-deoxy-D-manno-o 98.0 0.0015 3.2E-08 61.1 20.6 78 251-332 327-405 (419)
58 cd03795 GT1_like_4 This family 98.0 6.4E-05 1.4E-09 70.0 12.0 149 169-329 190-348 (357)
59 cd03804 GT1_wbaZ_like This fam 98.0 0.00033 7.1E-09 65.5 16.7 136 173-325 198-339 (351)
60 cd03794 GT1_wbuB_like This fam 98.0 9.8E-05 2.1E-09 68.9 12.6 149 168-329 218-381 (394)
61 cd04946 GT1_AmsK_like This fam 98.0 0.00026 5.7E-09 67.8 15.3 109 229-349 289-406 (407)
62 cd03818 GT1_ExpC_like This fam 97.9 0.00093 2E-08 63.7 18.3 95 229-328 281-381 (396)
63 PRK15427 colanic acid biosynth 97.9 0.00053 1.2E-08 65.7 15.6 114 228-355 278-406 (406)
64 PRK01021 lpxB lipid-A-disaccha 97.9 0.001 2.2E-08 65.6 17.2 192 119-332 371-590 (608)
65 PF02684 LpxB: Lipid-A-disacch 97.8 0.00052 1.1E-08 64.4 14.6 203 119-344 143-367 (373)
66 COG3980 spsG Spore coat polysa 97.8 0.00026 5.6E-09 62.4 11.1 141 169-326 158-302 (318)
67 cd04962 GT1_like_5 This family 97.8 0.00058 1.3E-08 64.1 14.3 112 229-354 253-370 (371)
68 PF00534 Glycos_transf_1: Glyc 97.8 0.00028 6E-09 58.7 10.9 147 167-325 12-170 (172)
69 PRK15484 lipopolysaccharide 1, 97.8 0.0014 3E-08 62.3 16.8 113 228-354 256-377 (380)
70 cd03799 GT1_amsK_like This is 97.8 0.00048 1E-08 64.0 13.0 91 229-326 236-340 (355)
71 TIGR00236 wecB UDP-N-acetylglu 97.7 0.00041 9E-09 65.4 12.0 135 169-324 197-341 (365)
72 PRK10307 putative glycosyl tra 97.7 0.0011 2.3E-08 63.7 15.0 114 229-354 284-407 (412)
73 TIGR02472 sucr_P_syn_N sucrose 97.7 0.012 2.7E-07 56.9 22.3 112 228-351 316-437 (439)
74 cd03786 GT1_UDP-GlcNAc_2-Epime 97.7 0.00047 1E-08 64.8 11.3 133 168-314 197-337 (363)
75 COG5017 Uncharacterized conser 97.7 0.00059 1.3E-08 53.3 9.6 107 172-297 2-122 (161)
76 cd03825 GT1_wcfI_like This fam 97.7 0.0034 7.4E-08 58.5 17.1 112 229-354 244-364 (365)
77 cd03808 GT1_cap1E_like This fa 97.6 0.0012 2.6E-08 60.6 13.8 147 168-327 186-343 (359)
78 PF04007 DUF354: Protein of un 97.6 0.0033 7.2E-08 58.2 15.8 134 159-312 170-308 (335)
79 PLN02949 transferase, transfer 97.6 0.0075 1.6E-07 58.8 19.0 111 228-353 334-455 (463)
80 cd03820 GT1_amsD_like This fam 97.6 0.0011 2.4E-08 60.6 12.6 93 230-328 236-334 (348)
81 PF13844 Glyco_transf_41: Glyc 97.6 0.0011 2.5E-08 63.6 12.5 138 167-315 282-431 (468)
82 cd03821 GT1_Bme6_like This fam 97.6 0.0019 4.2E-08 59.8 14.1 90 229-327 262-359 (375)
83 PRK09922 UDP-D-galactose:(gluc 97.5 0.0016 3.5E-08 61.2 13.1 147 170-329 180-342 (359)
84 TIGR02468 sucrsPsyn_pln sucros 97.5 0.023 5.1E-07 59.8 21.9 95 229-328 548-652 (1050)
85 cd03807 GT1_WbnK_like This fam 97.5 0.0054 1.2E-07 56.5 16.0 76 231-315 253-333 (365)
86 TIGR02149 glgA_Coryne glycogen 97.5 0.0028 6.1E-08 59.9 14.2 163 170-354 201-386 (388)
87 cd03816 GT1_ALG1_like This fam 97.5 0.002 4.3E-08 62.0 13.2 85 235-328 301-399 (415)
88 TIGR03088 stp2 sugar transfera 97.5 0.0026 5.7E-08 59.9 13.7 110 231-354 257-372 (374)
89 cd03806 GT1_ALG11_like This fa 97.4 0.026 5.6E-07 54.4 20.2 79 228-315 304-393 (419)
90 cd04949 GT1_gtfA_like This fam 97.4 0.0012 2.7E-08 62.1 10.9 99 229-331 261-363 (372)
91 PRK15179 Vi polysaccharide bio 97.4 0.032 6.9E-07 56.9 20.5 109 229-351 574-690 (694)
92 cd04951 GT1_WbdM_like This fam 97.3 0.0054 1.2E-07 57.0 13.9 109 229-352 245-358 (360)
93 cd03805 GT1_ALG2_like This fam 97.3 0.0043 9.3E-08 58.8 13.0 92 228-327 279-378 (392)
94 cd03809 GT1_mtfB_like This fam 97.3 0.0069 1.5E-07 56.1 14.1 91 228-325 252-348 (365)
95 cd03819 GT1_WavL_like This fam 97.3 0.0057 1.2E-07 56.8 13.3 151 168-329 183-347 (355)
96 cd03811 GT1_WabH_like This fam 97.2 0.0049 1.1E-07 56.4 12.2 80 229-315 246-333 (353)
97 TIGR02918 accessory Sec system 97.2 0.012 2.7E-07 57.8 15.4 112 229-354 376-499 (500)
98 PF13692 Glyco_trans_1_4: Glyc 97.2 0.0019 4.1E-08 51.3 7.9 79 229-314 53-135 (135)
99 TIGR03087 stp1 sugar transfera 97.2 0.019 4E-07 54.8 15.7 108 229-352 280-394 (397)
100 PRK09814 beta-1,6-galactofuran 97.2 0.0034 7.4E-08 58.5 10.3 111 229-351 207-332 (333)
101 PF02350 Epimerase_2: UDP-N-ac 97.1 0.0021 4.6E-08 60.1 8.4 132 167-314 178-318 (346)
102 PLN02275 transferase, transfer 97.1 0.14 3.1E-06 48.3 20.9 74 230-312 287-371 (371)
103 cd03813 GT1_like_3 This family 97.1 0.011 2.4E-07 57.9 13.6 92 229-326 354-455 (475)
104 cd03796 GT1_PIG-A_like This fa 97.1 0.01 2.2E-07 56.6 12.9 78 229-315 250-334 (398)
105 PF06722 DUF1205: Protein of u 96.8 0.0021 4.5E-08 48.2 4.4 63 158-223 29-96 (97)
106 cd04955 GT1_like_6 This family 96.7 0.037 7.9E-07 51.5 13.6 154 173-352 196-362 (363)
107 cd03812 GT1_CapH_like This fam 96.7 0.018 3.9E-07 53.5 11.3 80 229-316 249-333 (358)
108 COG0763 LpxB Lipid A disacchar 96.7 0.034 7.4E-07 51.6 12.5 210 118-353 145-380 (381)
109 cd03802 GT1_AviGT4_like This f 96.7 0.029 6.2E-07 51.6 12.4 128 172-314 173-308 (335)
110 TIGR02095 glgA glycogen/starch 96.6 0.049 1.1E-06 53.3 13.7 165 170-354 291-472 (473)
111 KOG4626 O-linked N-acetylgluco 96.5 0.023 4.9E-07 55.6 10.2 137 167-314 756-904 (966)
112 COG3914 Spy Predicted O-linked 96.5 0.041 8.9E-07 53.4 11.7 135 167-309 427-573 (620)
113 cd03792 GT1_Trehalose_phosphor 96.4 0.19 4E-06 47.4 15.8 110 229-354 252-371 (372)
114 PRK10017 colanic acid biosynth 96.3 0.19 4.1E-06 48.4 15.3 162 161-332 226-408 (426)
115 PHA01633 putative glycosyl tra 96.2 0.15 3.3E-06 47.3 14.0 101 229-331 201-324 (335)
116 PRK15490 Vi polysaccharide bio 96.1 0.2 4.4E-06 49.4 14.7 113 229-354 455-575 (578)
117 PRK14098 glycogen synthase; Pr 96.1 0.12 2.6E-06 50.8 13.3 166 171-353 308-484 (489)
118 cd04950 GT1_like_1 Glycosyltra 96.0 0.3 6.5E-06 46.1 15.2 78 229-315 254-341 (373)
119 PHA01630 putative group 1 glyc 96.0 0.2 4.3E-06 46.6 13.5 112 236-354 197-330 (331)
120 PLN02501 digalactosyldiacylgly 95.6 1.4 3.1E-05 44.8 18.1 74 232-315 604-682 (794)
121 cd03791 GT1_Glycogen_synthase_ 95.6 0.22 4.7E-06 48.7 12.7 135 169-314 295-442 (476)
122 PF13524 Glyco_trans_1_2: Glyc 95.5 0.15 3.2E-06 37.5 8.8 82 254-349 9-91 (92)
123 PRK00654 glgA glycogen synthas 95.3 0.33 7.2E-06 47.4 12.9 70 241-313 352-427 (466)
124 PLN02316 synthase/transferase 95.0 0.45 9.8E-06 50.5 13.3 116 229-352 900-1031(1036)
125 PRK10125 putative glycosyl tra 94.9 0.78 1.7E-05 44.0 14.0 101 185-308 256-365 (405)
126 TIGR03568 NeuC_NnaA UDP-N-acet 94.8 0.33 7.2E-06 45.8 11.1 130 168-312 200-337 (365)
127 PF06258 Mito_fiss_Elm1: Mitoc 94.5 0.35 7.6E-06 44.5 10.1 169 106-297 96-281 (311)
128 PLN02939 transferase, transfer 93.6 0.68 1.5E-05 48.6 10.9 83 229-313 837-930 (977)
129 PLN02846 digalactosyldiacylgly 91.5 7.9 0.00017 37.8 14.7 72 234-315 289-364 (462)
130 TIGR02400 trehalose_OtsA alpha 91.5 1.5 3.3E-05 42.7 10.0 104 235-354 342-456 (456)
131 TIGR02193 heptsyl_trn_I lipopo 90.9 2.2 4.7E-05 39.3 10.0 137 161-312 171-319 (319)
132 PRK14099 glycogen synthase; Pr 90.4 5.8 0.00012 39.0 13.0 68 248-315 370-448 (485)
133 cd01635 Glycosyltransferase_GT 88.7 2.3 5.1E-05 35.9 8.0 49 229-279 161-217 (229)
134 COG0381 WecB UDP-N-acetylgluco 88.6 3.8 8.3E-05 38.5 9.5 140 167-328 202-352 (383)
135 PLN00142 sucrose synthase 88.3 2 4.3E-05 44.7 8.1 72 250-326 669-749 (815)
136 TIGR02470 sucr_synth sucrose s 86.6 4.7 0.0001 41.8 9.7 64 257-325 657-725 (784)
137 COG4370 Uncharacterized protei 86.2 5.3 0.00011 36.3 8.5 85 235-325 301-387 (412)
138 TIGR03713 acc_sec_asp1 accesso 85.7 2.2 4.7E-05 42.3 6.6 92 229-332 409-507 (519)
139 PF04464 Glyphos_transf: CDP-G 85.7 2.7 5.8E-05 39.6 7.1 106 235-349 259-368 (369)
140 COG1817 Uncharacterized protei 85.3 20 0.00044 32.8 11.8 137 158-314 171-314 (346)
141 cd03789 GT1_LPS_heptosyltransf 81.5 5.8 0.00013 35.6 7.2 95 169-273 121-223 (279)
142 cd03793 GT1_Glycogen_synthase_ 80.7 7 0.00015 39.0 7.8 76 239-315 468-553 (590)
143 TIGR02919 accessory Sec system 80.5 4.4 9.6E-05 39.2 6.3 91 229-328 328-423 (438)
144 cd03788 GT1_TPS Trehalose-6-Ph 79.9 6.8 0.00015 38.2 7.5 103 234-352 346-459 (460)
145 PF06506 PrpR_N: Propionate ca 78.8 4.3 9.3E-05 33.9 5.0 69 244-313 31-123 (176)
146 PLN03063 alpha,alpha-trehalose 78.7 9.4 0.0002 40.1 8.5 98 241-353 371-476 (797)
147 COG0438 RfaG Glycosyltransfera 75.0 36 0.00078 30.2 10.6 80 229-315 257-343 (381)
148 PF05159 Capsule_synth: Capsul 74.5 21 0.00046 31.9 8.7 41 232-275 186-226 (269)
149 PRK14501 putative bifunctional 70.3 16 0.00034 38.0 7.6 109 233-353 346-461 (726)
150 TIGR02398 gluc_glyc_Psyn gluco 69.1 1.1E+02 0.0024 30.1 12.7 106 232-353 365-481 (487)
151 TIGR02195 heptsyl_trn_II lipop 66.9 31 0.00067 31.8 8.2 96 168-273 173-276 (334)
152 COG4394 Uncharacterized protei 66.2 1E+02 0.0023 28.0 10.6 153 180-352 184-368 (370)
153 TIGR02201 heptsyl_trn_III lipo 65.2 44 0.00095 31.0 8.9 98 168-273 180-285 (344)
154 COG3660 Predicted nucleoside-d 64.7 93 0.002 27.9 9.9 99 167-273 160-271 (329)
155 PRK10916 ADP-heptose:LPS hepto 63.3 28 0.00062 32.4 7.3 96 168-273 179-286 (348)
156 COG0859 RfaF ADP-heptose:LPS h 63.3 27 0.00058 32.5 7.0 95 169-273 175-276 (334)
157 PRK10964 ADP-heptose:LPS hepto 63.1 27 0.0006 32.0 7.1 132 169-313 178-321 (322)
158 PF01075 Glyco_transf_9: Glyco 61.8 15 0.00032 32.2 4.9 99 167-273 103-208 (247)
159 PF03033 Glyco_transf_28: Glyc 60.0 5.2 0.00011 31.5 1.4 33 10-42 100-132 (139)
160 PRK12446 undecaprenyldiphospho 58.6 40 0.00086 31.6 7.4 98 170-273 3-120 (352)
161 PLN02470 acetolactate synthase 56.0 60 0.0013 32.8 8.6 29 246-274 75-109 (585)
162 PRK10422 lipopolysaccharide co 55.6 63 0.0014 30.1 8.2 98 168-273 182-287 (352)
163 PF10093 DUF2331: Uncharacteri 54.6 47 0.001 31.4 6.9 91 180-275 190-290 (374)
164 KOG0853 Glycosyltransferase [C 54.3 26 0.00056 34.3 5.3 56 254-316 377-435 (495)
165 PRK04885 ppnK inorganic polyph 50.2 38 0.00083 30.4 5.5 51 249-314 37-93 (265)
166 cd07025 Peptidase_S66 LD-Carbo 49.9 42 0.00092 30.3 5.8 75 182-277 46-122 (282)
167 TIGR00725 conserved hypothetic 49.8 1.1E+02 0.0023 25.1 7.6 96 159-275 23-123 (159)
168 PRK10353 3-methyl-adenine DNA 48.4 60 0.0013 27.5 6.0 58 272-332 22-97 (187)
169 COG0801 FolK 7,8-dihydro-6-hyd 48.4 39 0.00083 27.8 4.7 29 171-199 3-31 (160)
170 PRK02797 4-alpha-L-fucosyltran 48.0 2.3E+02 0.0049 26.2 10.3 130 171-311 146-291 (322)
171 PRK03708 ppnK inorganic polyph 47.7 34 0.00074 30.9 4.8 52 248-314 58-112 (277)
172 PRK02649 ppnK inorganic polyph 47.7 34 0.00073 31.4 4.8 52 248-314 69-124 (305)
173 PLN02929 NADH kinase 47.6 34 0.00074 31.3 4.8 63 249-314 66-137 (301)
174 PLN02935 Bifunctional NADH kin 45.5 42 0.00091 33.0 5.2 52 247-314 262-318 (508)
175 PRK02155 ppnK NAD(+)/NADH kina 44.6 47 0.001 30.2 5.3 51 249-314 65-119 (291)
176 cd01840 SGNH_hydrolase_yrhL_li 44.4 65 0.0014 25.7 5.6 39 168-207 50-88 (150)
177 PF07429 Glyco_transf_56: 4-al 44.3 1.9E+02 0.0041 27.1 8.9 136 170-313 184-332 (360)
178 PRK06270 homoserine dehydrogen 42.2 1.5E+02 0.0032 27.6 8.3 59 238-297 80-150 (341)
179 PRK06718 precorrin-2 dehydroge 41.9 1.1E+02 0.0024 26.1 6.9 142 167-334 9-165 (202)
180 PRK14077 pnk inorganic polypho 41.6 50 0.0011 30.0 4.9 52 248-314 65-120 (287)
181 cd03412 CbiK_N Anaerobic cobal 40.8 52 0.0011 25.8 4.3 37 170-206 2-40 (127)
182 cd07039 TPP_PYR_POX Pyrimidine 40.0 90 0.0019 25.6 5.9 27 248-274 64-96 (164)
183 COG0052 RpsB Ribosomal protein 39.7 18 0.0004 31.8 1.7 33 10-42 156-190 (252)
184 cd07062 Peptidase_S66_mccF_lik 38.5 75 0.0016 29.2 5.6 74 182-276 50-125 (308)
185 PRK01911 ppnK inorganic polyph 38.4 64 0.0014 29.4 5.1 52 248-314 65-120 (292)
186 PF08030 NAD_binding_6: Ferric 38.3 29 0.00064 27.8 2.7 39 170-208 3-46 (156)
187 PF05014 Nuc_deoxyrib_tr: Nucl 37.8 33 0.0007 26.1 2.7 39 240-278 56-100 (113)
188 PRK14075 pnk inorganic polypho 37.2 75 0.0016 28.3 5.3 51 249-314 43-94 (256)
189 TIGR01470 cysG_Nterm siroheme 37.0 2.7E+02 0.0058 23.8 8.8 143 168-334 9-165 (205)
190 COG3340 PepE Peptidase E [Amin 36.8 2.8E+02 0.0061 24.0 8.3 37 168-204 32-68 (224)
191 PF05693 Glycogen_syn: Glycoge 36.8 58 0.0013 32.8 4.8 93 238-331 462-566 (633)
192 PF06180 CbiK: Cobalt chelatas 36.6 46 0.00099 29.8 3.8 39 170-208 2-43 (262)
193 TIGR00661 MJ1255 conserved hyp 36.2 1.3E+02 0.0027 27.6 6.8 32 242-273 88-119 (321)
194 PRK04539 ppnK inorganic polyph 36.0 67 0.0014 29.4 4.8 52 248-314 69-124 (296)
195 PF00731 AIRC: AIR carboxylase 34.8 2.5E+02 0.0054 22.8 11.0 135 171-333 2-148 (150)
196 PF05225 HTH_psq: helix-turn-h 34.8 62 0.0013 20.2 3.1 26 300-327 1-26 (45)
197 PRK03378 ppnK inorganic polyph 34.0 73 0.0016 29.1 4.7 51 248-314 64-119 (292)
198 PF10820 DUF2543: Protein of u 34.0 1.6E+02 0.0035 20.4 5.1 42 304-354 36-77 (81)
199 COG3195 Uncharacterized protei 33.9 1.9E+02 0.0042 23.8 6.5 87 244-332 71-164 (176)
200 PRK03372 ppnK inorganic polyph 33.1 79 0.0017 29.0 4.8 52 248-314 73-128 (306)
201 PRK03501 ppnK inorganic polyph 32.7 95 0.0021 27.9 5.2 52 249-314 41-97 (264)
202 PRK01185 ppnK inorganic polyph 32.5 90 0.0019 28.1 5.0 52 248-314 53-105 (271)
203 COG2159 Predicted metal-depend 31.7 4E+02 0.0086 24.2 9.8 113 133-263 96-210 (293)
204 TIGR01012 Sa_S2_E_A ribosomal 31.6 71 0.0015 27.2 3.9 32 10-41 108-141 (196)
205 COG0299 PurN Folate-dependent 31.2 1.2E+02 0.0026 25.8 5.2 118 185-329 66-186 (200)
206 COG1422 Predicted membrane pro 31.0 1.3E+02 0.0028 25.7 5.3 79 259-349 24-104 (201)
207 PRK14092 2-amino-4-hydroxy-6-h 30.8 1.2E+02 0.0026 25.0 5.0 31 167-197 5-35 (163)
208 PRK12311 rpsB 30S ribosomal pr 30.7 38 0.00083 31.3 2.4 33 10-42 152-186 (326)
209 COG0297 GlgA Glycogen synthase 30.3 2.2E+02 0.0048 28.1 7.6 155 183-351 308-474 (487)
210 PRK04020 rps2P 30S ribosomal p 30.2 75 0.0016 27.3 3.9 33 10-42 114-148 (204)
211 cd01425 RPS2 Ribosomal protein 30.1 44 0.00095 28.4 2.5 33 9-41 126-160 (193)
212 PRK11914 diacylglycerol kinase 29.7 1.6E+02 0.0034 26.9 6.3 27 249-275 66-96 (306)
213 PF02826 2-Hacid_dh_C: D-isome 29.7 1.5E+02 0.0032 24.6 5.6 99 168-309 36-142 (178)
214 PRK15424 propionate catabolism 28.7 1.6E+02 0.0036 29.4 6.5 31 245-276 62-92 (538)
215 TIGR02329 propionate_PrpR prop 28.6 1.7E+02 0.0036 29.3 6.6 31 245-276 52-82 (526)
216 cd04299 GT1_Glycogen_Phosphory 28.1 7.3E+02 0.016 26.2 11.2 97 242-351 563-686 (778)
217 TIGR00147 lipid kinase, YegS/R 27.4 2.2E+02 0.0048 25.6 6.8 28 248-275 58-91 (293)
218 KOG2941 Beta-1,4-mannosyltrans 27.1 5.4E+02 0.012 24.3 12.2 144 167-327 252-423 (444)
219 KOG0202 Ca2+ transporting ATPa 27.1 7.6E+02 0.016 26.3 10.7 167 168-353 570-748 (972)
220 PRK01231 ppnK inorganic polyph 27.1 1.3E+02 0.0028 27.5 5.1 51 249-314 64-118 (295)
221 PRK04761 ppnK inorganic polyph 26.9 58 0.0012 28.9 2.7 27 249-275 27-57 (246)
222 PRK14076 pnk inorganic polypho 26.6 1E+02 0.0022 31.1 4.8 52 248-314 349-404 (569)
223 PF10083 DUF2321: Uncharacteri 26.3 1.1E+02 0.0025 24.8 4.0 66 273-349 78-146 (158)
224 cd07038 TPP_PYR_PDC_IPDC_like 25.8 1.3E+02 0.0028 24.5 4.6 28 248-275 60-93 (162)
225 cd07035 TPP_PYR_POX_like Pyrim 25.6 1.1E+02 0.0025 24.4 4.2 28 248-275 60-93 (155)
226 TIGR03837 efp_adjacent_2 conse 25.6 1.6E+02 0.0034 27.8 5.4 92 179-275 187-288 (371)
227 PRK08322 acetolactate synthase 25.2 4.2E+02 0.0092 26.3 8.9 28 247-274 63-96 (547)
228 PRK13059 putative lipid kinase 25.0 2.9E+02 0.0063 25.0 7.1 27 249-275 58-90 (295)
229 PHA00490 terminal protein 25.0 2.4E+02 0.0053 24.0 5.8 38 318-355 173-210 (266)
230 PRK05299 rpsB 30S ribosomal pr 25.0 58 0.0012 29.1 2.4 34 9-42 156-191 (258)
231 PRK08673 3-deoxy-7-phosphohept 24.5 4.3E+02 0.0093 24.7 8.1 86 189-297 191-297 (335)
232 TIGR02836 spore_IV_A stage IV 24.4 2.7E+02 0.0058 27.1 6.7 72 241-312 139-233 (492)
233 TIGR02482 PFKA_ATP 6-phosphofr 24.1 88 0.0019 28.7 3.5 37 242-278 86-126 (301)
234 cd07037 TPP_PYR_MenD Pyrimidin 23.9 70 0.0015 26.3 2.6 28 248-275 61-94 (162)
235 TIGR00624 tag DNA-3-methyladen 23.9 2.2E+02 0.0048 23.9 5.5 44 272-315 21-82 (179)
236 PRK08155 acetolactate synthase 23.9 1.3E+02 0.0029 30.1 5.1 28 247-274 76-109 (564)
237 COG3618 Predicted metal-depend 23.3 5.5E+02 0.012 23.3 8.2 48 185-257 124-171 (279)
238 CHL00067 rps2 ribosomal protei 23.3 66 0.0014 28.2 2.4 34 9-42 160-195 (230)
239 TIGR01011 rpsB_bact ribosomal 23.2 66 0.0014 28.1 2.4 34 9-42 154-189 (225)
240 PRK13010 purU formyltetrahydro 22.5 5.9E+02 0.013 23.1 9.9 114 188-328 159-275 (289)
241 PRK13054 lipid kinase; Reviewe 22.4 4E+02 0.0087 24.1 7.6 28 248-275 57-92 (300)
242 PRK03359 putative electron tra 22.2 1E+02 0.0022 27.5 3.5 31 10-40 112-148 (256)
243 TIGR00655 PurU formyltetrahydr 22.1 5.3E+02 0.012 23.3 8.1 115 187-328 149-266 (280)
244 COG1609 PurR Transcriptional r 21.9 5.2E+02 0.011 23.8 8.3 93 106-200 113-207 (333)
245 PF08452 DNAP_B_exo_N: DNA pol 21.9 48 0.001 17.1 0.7 17 158-174 4-20 (22)
246 TIGR00730 conserved hypothetic 21.8 3.6E+02 0.0079 22.5 6.5 30 244-274 95-133 (178)
247 PRK13337 putative lipid kinase 21.8 3.3E+02 0.0072 24.7 6.9 27 249-275 59-91 (304)
248 COG2327 WcaK Polysaccharide py 21.7 4E+02 0.0088 25.4 7.3 69 240-315 280-351 (385)
249 PF10933 DUF2827: Protein of u 21.7 3.3E+02 0.0071 25.7 6.6 99 234-352 258-363 (364)
250 COG1327 Predicted transcriptio 21.6 1.1E+02 0.0024 24.8 3.0 56 255-312 35-92 (156)
251 PF09547 Spore_IV_A: Stage IV 21.2 2.8E+02 0.0061 26.9 6.2 71 242-312 141-233 (492)
252 PRK04946 hypothetical protein; 21.2 59 0.0013 27.3 1.6 28 232-261 141-169 (181)
253 COG3245 CycB Cytochrome c5 [En 21.1 72 0.0016 24.6 1.9 46 264-311 60-121 (126)
254 PF02016 Peptidase_S66: LD-car 21.0 1.2E+02 0.0025 27.6 3.6 74 182-276 46-121 (284)
255 TIGR01361 DAHP_synth_Bsub phos 20.7 6.1E+02 0.013 22.6 9.1 26 171-198 134-159 (260)
256 cd03409 Chelatase_Class_II Cla 20.5 2.4E+02 0.0052 20.4 4.7 35 171-205 2-39 (101)
257 PF07905 PucR: Purine cataboli 20.4 4E+02 0.0087 20.4 7.8 41 159-203 36-77 (123)
258 PRK02231 ppnK inorganic polyph 20.4 1E+02 0.0022 27.8 3.1 50 249-313 44-97 (272)
259 cd00763 Bacterial_PFK Phosphof 20.3 1.2E+02 0.0025 28.1 3.5 37 242-278 87-126 (317)
260 cd01141 TroA_d Periplasmic bin 20.1 1.3E+02 0.0028 24.9 3.5 29 10-38 69-99 (186)
No 1
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=5.1e-63 Score=472.03 Aligned_cols=342 Identities=43% Similarity=0.794 Sum_probs=280.2
Q ss_pred CccEEEeCCccchHHHHHHHcCCCeEEEecchHHHHHHHhhchhhhhcCc-ccccc--ccccccCCCcccchhHHhhhhh
Q 018483 10 RISCIVYDSTMCFSQSVADHLKLPGICVRTSPAATMLAFAVFPRLHEQGY-ISFLE--SMSLDRVSDLLSLMLKELAASM 86 (355)
Q Consensus 10 ~~D~vI~D~~~~~~~~iA~~lgiP~i~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~--~~~~~~v~~~~~~~~~~l~~~~ 86 (355)
+++|||+|.++.|+.++|+++|||++.|++++++.+..+++.+....... .|... ......+|+++.++..+++...
T Consensus 105 p~~cVI~D~f~~Wa~dvA~~lgIP~v~F~t~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iPg~~~~~~~dlp~~~ 184 (451)
T PLN02410 105 EIACVVYDEFMYFAEAAAKEFKLPNVIFSTTSATAFVCRSVFDKLYANNVLAPLKEPKGQQNELVPEFHPLRCKDFPVSH 184 (451)
T ss_pred CcEEEEECCcchHHHHHHHHcCCCEEEEEccCHHHHHHHHHHHHHHhccCCCCccccccCccccCCCCCCCChHHCcchh
Confidence 68999999999999999999999999999999998877765433222111 12211 1112357888777777877533
Q ss_pred hccCCchHHHHHHHHHhhhccCcEEEEcCccccchHHHHHHHHhhCCCceecCcccccCCCcCCCCC-cccchhhHhhhc
Q 018483 87 KKITTDGMLELRAAVADSVKKCSALIVNTVDFLEQEALTKVQELFSASAFTIGPFHKLVPTISGSLL-KEDTNCISWLNK 165 (355)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~l~nt~~~le~~~~~~~r~~~~~~v~~vGpl~~~~~~~~~~~~-~~~~~~~~~l~~ 165 (355)
. .....+...+.... ...+++.+++|||++||+.+++.++..+++|+++|||++..... ...+ .++.+|.+|||+
T Consensus 185 ~-~~~~~~~~~~~~~~-~~~~~~~vlvNTf~eLE~~~~~~l~~~~~~~v~~vGpl~~~~~~--~~~~~~~~~~~~~wLd~ 260 (451)
T PLN02410 185 W-ASLESIMELYRNTV-DKRTASSVIINTASCLESSSLSRLQQQLQIPVYPIGPLHLVASA--PTSLLEENKSCIEWLNK 260 (451)
T ss_pred c-CCcHHHHHHHHHHh-hcccCCEEEEeChHHhhHHHHHHHHhccCCCEEEecccccccCC--CccccccchHHHHHHHh
Confidence 1 12222333332222 35678999999999999999999988766789999999864321 1122 233468999999
Q ss_pred cCCCceEEEeeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCcCCCCcccCCChhhhhhcCCCCceeecCChHhhhhc
Q 018483 166 QAPKSVIYVSFGSIASIDEKELLETAWGLANCEQPFLWVVRPGLVRGSNCLELLPINFQDSVGERGCIVEWAPQKEVLAN 245 (355)
Q Consensus 166 ~~~~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~pq~~~L~~ 245 (355)
+++++||||||||....+.+++.+++.+|+.++++|||+++.+...+.+....+|++|++++++|+++++|+||.+||+|
T Consensus 261 ~~~~sVvyvsfGS~~~~~~~q~~ela~gLe~s~~~FlWv~r~~~~~~~~~~~~lp~~f~er~~~~g~v~~w~PQ~~iL~h 340 (451)
T PLN02410 261 QKKNSVIFVSLGSLALMEINEVMETASGLDSSNQQFLWVIRPGSVRGSEWIESLPKEFSKIISGRGYIVKWAPQKEVLSH 340 (451)
T ss_pred CCCCcEEEEEccccccCCHHHHHHHHHHHHhcCCCeEEEEccCcccccchhhcCChhHHHhccCCeEEEccCCHHHHhCC
Confidence 98899999999999999999999999999999999999998532111111234899999999999999999999999999
Q ss_pred ccCCceeeccCchhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEec-ccCHHHHHHHHHHHhcCchhHHHHHHH
Q 018483 246 DAVGGFWSHCGWNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELE-EFEGGTIKKAIKRLMVDTEGKEMRKKA 324 (355)
Q Consensus 246 ~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~-~~~~~~l~~ai~~~l~~~~~~~~~~~a 324 (355)
+++++|||||||||++||+++|||||++|+++||+.||+++++.+|+|+.+. .++.++|+++|+++|.+++|++||++|
T Consensus 341 ~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~v~~av~~lm~~~~~~~~r~~a 420 (451)
T PLN02410 341 PAVGGFWSHCGWNSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVEGDLDRGAVERAVKRLMVEEEGEEMRKRA 420 (451)
T ss_pred CccCeeeecCchhHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeCCcccHHHHHHHHHHHHcCCcHHHHHHHH
Confidence 9999999999999999999999999999999999999999987679999998 999999999999999887788999999
Q ss_pred HHHHHHHhhhhhcCCChHHHHHHHHHHHHcC
Q 018483 325 IHLKEKVELPLKEGGSCYNSLNDLVKKILSF 355 (355)
Q Consensus 325 ~~l~~~~~~a~~~~g~~~~~~~~~~~~l~~~ 355 (355)
+++++++++|+.+||||+.++++|++.++.+
T Consensus 421 ~~l~~~~~~a~~~gGsS~~~l~~fv~~~~~~ 451 (451)
T PLN02410 421 ISLKEQLRASVISGGSSHNSLEEFVHFMRTL 451 (451)
T ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999864
No 2
>PLN02207 UDP-glycosyltransferase
Probab=100.00 E-value=5.9e-61 Score=457.67 Aligned_cols=339 Identities=26% Similarity=0.459 Sum_probs=273.1
Q ss_pred CccEEEeCCccchHHHHHHHcCCCeEEEecchHHHHHHHhhchhhhhc-CccccccccccccCCCc-ccchhHHhhhhhh
Q 018483 10 RISCIVYDSTMCFSQSVADHLKLPGICVRTSPAATMLAFAVFPRLHEQ-GYISFLESMSLDRVSDL-LSLMLKELAASMK 87 (355)
Q Consensus 10 ~~D~vI~D~~~~~~~~iA~~lgiP~i~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~v~~~-~~~~~~~l~~~~~ 87 (355)
+++|||+|.++.|+..+|+++|||++.|+++++..+..+.+.+..... ...+.+.......+|++ +.++..+++....
T Consensus 115 pv~cvV~D~~~~w~~~vA~~~gip~~~f~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vPgl~~~l~~~dlp~~~~ 194 (468)
T PLN02207 115 KVKGFVADFFCLPMIDVAKDVSLPFYVFLTTNSGFLAMMQYLADRHSKDTSVFVRNSEEMLSIPGFVNPVPANVLPSALF 194 (468)
T ss_pred CeEEEEECCcchHHHHHHHHhCCCEEEEECccHHHHHHHHHhhhccccccccCcCCCCCeEECCCCCCCCChHHCcchhc
Confidence 459999999999999999999999999999999888877665432111 11111111112357888 5788888886542
Q ss_pred ccCCchHHHHHHHHHhhhccCcEEEEcCccccchHHHHHHHHh-hCCCceecCcccccCCCcCCC-CCcccchhhHhhhc
Q 018483 88 KITTDGMLELRAAVADSVKKCSALIVNTVDFLEQEALTKVQEL-FSASAFTIGPFHKLVPTISGS-LLKEDTNCISWLNK 165 (355)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~l~nt~~~le~~~~~~~r~~-~~~~v~~vGpl~~~~~~~~~~-~~~~~~~~~~~l~~ 165 (355)
..+.+ ..+.+......+++++++||+++||+++++.++.. ..+++++|||++........+ ....+.+|.+|||+
T Consensus 195 --~~~~~-~~~~~~~~~~~~~~~vlvNtf~~LE~~~~~~~~~~~~~p~v~~VGPl~~~~~~~~~~~~~~~~~~~~~WLd~ 271 (468)
T PLN02207 195 --VEDGY-DAYVKLAILFTKANGILVNSSFDIEPYSVNHFLDEQNYPSVYAVGPIFDLKAQPHPEQDLARRDELMKWLDD 271 (468)
T ss_pred --CCccH-HHHHHHHHhcccCCEEEEEchHHHhHHHHHHHHhccCCCcEEEecCCcccccCCCCccccchhhHHHHHHhc
Confidence 22222 33334445677899999999999999999998652 234699999998643210000 01123469999999
Q ss_pred cCCCceEEEeeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCcCCCCcccCCChhhhhhcCCCCceeecCChHhhhhc
Q 018483 166 QAPKSVIYVSFGSIASIDEKELLETAWGLANCEQPFLWVVRPGLVRGSNCLELLPINFQDSVGERGCIVEWAPQKEVLAN 245 (355)
Q Consensus 166 ~~~~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~pq~~~L~~ 245 (355)
++++++|||||||...++.+++++++.+|+.++++|||+++...... .+.+|++|+++.++|+++++|+||.+||+|
T Consensus 272 ~~~~sVVyvSfGS~~~~~~~q~~ela~~l~~~~~~flW~~r~~~~~~---~~~lp~~f~er~~~~g~i~~W~PQ~~IL~H 348 (468)
T PLN02207 272 QPEASVVFLCFGSMGRLRGPLVKEIAHGLELCQYRFLWSLRTEEVTN---DDLLPEGFLDRVSGRGMICGWSPQVEILAH 348 (468)
T ss_pred CCCCcEEEEEeccCcCCCHHHHHHHHHHHHHCCCcEEEEEeCCCccc---cccCCHHHHhhcCCCeEEEEeCCHHHHhcc
Confidence 98899999999999999999999999999999999999998532111 234889999999999999999999999999
Q ss_pred ccCCceeeccCchhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEec---------ccCHHHHHHHHHHHhcCch
Q 018483 246 DAVGGFWSHCGWNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELE---------EFEGGTIKKAIKRLMVDTE 316 (355)
Q Consensus 246 ~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~---------~~~~~~l~~ai~~~l~~~~ 316 (355)
+++++|||||||||++||+++|||||+||+++||+.||+++++.+|+|+.+. .++.++|+++|+++|++ +
T Consensus 349 ~~vg~FvTH~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~~~~~~~~~~v~~e~i~~av~~vm~~-~ 427 (468)
T PLN02207 349 KAVGGFVSHCGWNSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKLDYRVHSDEIVNANEIETAIRCVMNK-D 427 (468)
T ss_pred cccceeeecCccccHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEEecccccccCCcccHHHHHHHHHHHHhc-c
Confidence 9999999999999999999999999999999999999998777689999662 35899999999999973 3
Q ss_pred hHHHHHHHHHHHHHHhhhhhcCCChHHHHHHHHHHHHcC
Q 018483 317 GKEMRKKAIHLKEKVELPLKEGGSCYNSLNDLVKKILSF 355 (355)
Q Consensus 317 ~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~l~~~ 355 (355)
+++||+||+++++++++|+.+||||+.++++|+++++.+
T Consensus 428 ~~~~r~~a~~l~~~a~~A~~~GGSS~~~l~~~v~~~~~~ 466 (468)
T PLN02207 428 NNVVRKRVMDISQMIQRATKNGGSSFAAIEKFIHDVIGI 466 (468)
T ss_pred hHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhc
Confidence 589999999999999999999999999999999998753
No 3
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=100.00 E-value=1.1e-60 Score=456.70 Aligned_cols=340 Identities=30% Similarity=0.521 Sum_probs=275.7
Q ss_pred CccEEEeCCccchHHHHHHHcCCCeEEEecchHHHHHHHhhchhhhhcCccccccccccccCCCcccchhHHhhhhhhcc
Q 018483 10 RISCIVYDSTMCFSQSVADHLKLPGICVRTSPAATMLAFAVFPRLHEQGYISFLESMSLDRVSDLLSLMLKELAASMKKI 89 (355)
Q Consensus 10 ~~D~vI~D~~~~~~~~iA~~lgiP~i~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~v~~~~~~~~~~l~~~~~~~ 89 (355)
+|+|||+|.++.|+.++|+++|||++.|+++++..+..+.+.+........+.........+|+++.++..+++.... .
T Consensus 104 ~p~cvV~D~f~~Wa~dVA~elgIP~v~F~t~sA~~~~~~~~~~~~~~~~~~~~~~~~~~~~iPg~~~l~~~dlp~~~~-~ 182 (481)
T PLN02992 104 KPTALIVDLFGTDALCLGGEFNMLTYIFIASNARFLGVSIYYPTLDKDIKEEHTVQRKPLAMPGCEPVRFEDTLDAYL-V 182 (481)
T ss_pred CCeEEEECCcchhHHHHHHHcCCCEEEEecCcHHHHHHHHhhhhhccccccccccCCCCcccCCCCccCHHHhhHhhc-C
Confidence 689999999999999999999999999999999887766554322111000100011123478888888888885332 2
Q ss_pred CCchHHHHHHHHHhhhccCcEEEEcCccccchHHHHHHHHh--h----CCCceecCcccccCCCcCCCCCcccchhhHhh
Q 018483 90 TTDGMLELRAAVADSVKKCSALIVNTVDFLEQEALTKVQEL--F----SASAFTIGPFHKLVPTISGSLLKEDTNCISWL 163 (355)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~l~nt~~~le~~~~~~~r~~--~----~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~l 163 (355)
........+.+......+++.+++||+.+||+.+++.++.. + ++|+++|||++..... . .++.+|.+||
T Consensus 183 ~~~~~~~~~~~~~~~~~~a~gvlvNTf~eLE~~~l~~l~~~~~~~~~~~~~v~~VGPl~~~~~~---~--~~~~~c~~wL 257 (481)
T PLN02992 183 PDEPVYRDFVRHGLAYPKADGILVNTWEEMEPKSLKSLQDPKLLGRVARVPVYPIGPLCRPIQS---S--KTDHPVLDWL 257 (481)
T ss_pred CCcHHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHhhccccccccCCceEEecCccCCcCC---C--cchHHHHHHH
Confidence 33333444555556677899999999999999999998752 1 2569999999764221 1 2345699999
Q ss_pred hccCCCceEEEeeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCcC--------------CCCcccCCChhhhhhcCC
Q 018483 164 NKQAPKSVIYVSFGSIASIDEKELLETAWGLANCEQPFLWVVRPGLVR--------------GSNCLELLPINFQDSVGE 229 (355)
Q Consensus 164 ~~~~~~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~--------------~~~~~~~lp~~~~~~~~~ 229 (355)
|++++++||||||||...++.+++++++.+|+.++++|||+++..... ..+..+.+|++|.+++++
T Consensus 258 d~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flW~~r~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~f~eR~~~ 337 (481)
T PLN02992 258 NKQPNESVLYISFGSGGSLSAKQLTELAWGLEMSQQRFVWVVRPPVDGSACSAYFSANGGETRDNTPEYLPEGFVSRTHD 337 (481)
T ss_pred HcCCCCceEEEeecccccCCHHHHHHHHHHHHHcCCCEEEEEeCCcccccccccccCcccccccchhhhCCHHHHHHhcC
Confidence 998889999999999999999999999999999999999999742100 000123489999999998
Q ss_pred CCcee-ecCChHhhhhcccCCceeeccCchhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEec----ccCHHHH
Q 018483 230 RGCIV-EWAPQKEVLANDAVGGFWSHCGWNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELE----EFEGGTI 304 (355)
Q Consensus 230 ~~~~~-~~~pq~~~L~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~----~~~~~~l 304 (355)
+++++ +|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||+++++++|+|+.++ .++.++|
T Consensus 338 rg~vv~~W~PQ~~iL~h~~vg~FitH~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~~~~~~~~l 417 (481)
T PLN02992 338 RGFVVPSWAPQAEILAHQAVGGFLTHCGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSDDPKEVISRSKI 417 (481)
T ss_pred CCEEEeecCCHHHHhCCcccCeeEecCchhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEecCCCCcccHHHH
Confidence 88776 999999999999999999999999999999999999999999999999999964489999996 3899999
Q ss_pred HHHHHHHhcCchhHHHHHHHHHHHHHHhhhhh--cCCChHHHHHHHHHHHHcC
Q 018483 305 KKAIKRLMVDTEGKEMRKKAIHLKEKVELPLK--EGGSCYNSLNDLVKKILSF 355 (355)
Q Consensus 305 ~~ai~~~l~~~~~~~~~~~a~~l~~~~~~a~~--~~g~~~~~~~~~~~~l~~~ 355 (355)
+++|+++|.+++|+++|++|+++++.+++|+. +||||+.++++|++.+++|
T Consensus 418 ~~av~~vm~~~~g~~~r~~a~~~~~~a~~Av~~~~GGSS~~~l~~~v~~~~~~ 470 (481)
T PLN02992 418 EALVRKVMVEEEGEEMRRKVKKLRDTAEMSLSIDGGGVAHESLCRVTKECQRF 470 (481)
T ss_pred HHHHHHHhcCCchHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHH
Confidence 99999999987789999999999999999994 5999999999999998764
No 4
>PLN02555 limonoid glucosyltransferase
Probab=100.00 E-value=3.4e-60 Score=454.30 Aligned_cols=339 Identities=27% Similarity=0.544 Sum_probs=277.6
Q ss_pred CccEEEeCCccchHHHHHHHcCCCeEEEecchHHHHHHHhhchhhhhcCcccccc---ccccccCCCcccchhHHhhhhh
Q 018483 10 RISCIVYDSTMCFSQSVADHLKLPGICVRTSPAATMLAFAVFPRLHEQGYISFLE---SMSLDRVSDLLSLMLKELAASM 86 (355)
Q Consensus 10 ~~D~vI~D~~~~~~~~iA~~lgiP~i~~~~~~~~~~~~~~~~~~~~~~~~~p~~~---~~~~~~v~~~~~~~~~~l~~~~ 86 (355)
+++|||+|.++.|+.++|+++|||+++|++++++.+..+++++. ...+... ......+|+++.++..+++...
T Consensus 116 pv~ciV~D~~~~wa~~vA~~~gIP~~~F~t~~a~~~~~~~~~~~----~~~~~~~~~~~~~~~~iPglp~l~~~dlp~~~ 191 (480)
T PLN02555 116 PVSCLINNPFIPWVCDVAEELGIPSAVLWVQSCACFSAYYHYYH----GLVPFPTETEPEIDVQLPCMPLLKYDEIPSFL 191 (480)
T ss_pred CceEEEECCcchHHHHHHHHcCCCeEEeecccHHHHHHHHHHhh----cCCCcccccCCCceeecCCCCCcCHhhCcccc
Confidence 46999999999999999999999999999999998888776531 1112111 1112358899888889988644
Q ss_pred hc-cCCchHHHHHHHHHhhhccCcEEEEcCccccchHHHHHHHHhhCCCceecCcccccCCC--c--CCCCCcccchhhH
Q 018483 87 KK-ITTDGMLELRAAVADSVKKCSALIVNTVDFLEQEALTKVQELFSASAFTIGPFHKLVPT--I--SGSLLKEDTNCIS 161 (355)
Q Consensus 87 ~~-~~~~~~~~~~~~~~~~~~~~~~~l~nt~~~le~~~~~~~r~~~~~~v~~vGpl~~~~~~--~--~~~~~~~~~~~~~ 161 (355)
.. ...+...+.+.+......+++.+++|||.+||+++++.++..+ |++.|||++..... . +......+.+|.+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~~~~l~~~~--~v~~iGPl~~~~~~~~~~~~~~~~~~~~~~~~ 269 (480)
T PLN02555 192 HPSSPYPFLRRAILGQYKNLDKPFCILIDTFQELEKEIIDYMSKLC--PIKPVGPLFKMAKTPNSDVKGDISKPADDCIE 269 (480)
T ss_pred cCCCCchHHHHHHHHHHHhcccCCEEEEEchHHHhHHHHHHHhhCC--CEEEeCcccCccccccccccccccccchhHHH
Confidence 20 1222334444455566778899999999999999999998742 59999999754211 0 0111233456999
Q ss_pred hhhccCCCceEEEeeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCcCCCCcccCCChhhhhhcCCCCceeecCChHh
Q 018483 162 WLNKQAPKSVIYVSFGSIASIDEKELLETAWGLANCEQPFLWVVRPGLVRGSNCLELLPINFQDSVGERGCIVEWAPQKE 241 (355)
Q Consensus 162 ~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~pq~~ 241 (355)
|||++++++||||||||+..++.+++.+++.+|+.++++|||+++............+|+++.++.++|+++++|+||.+
T Consensus 270 wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~~l~~~~~~flW~~~~~~~~~~~~~~~lp~~~~~~~~~~g~v~~W~PQ~~ 349 (480)
T PLN02555 270 WLDSKPPSSVVYISFGTVVYLKQEQIDEIAYGVLNSGVSFLWVMRPPHKDSGVEPHVLPEEFLEKAGDKGKIVQWCPQEK 349 (480)
T ss_pred HHhCCCCCceeEEEeccccCCCHHHHHHHHHHHHhcCCeEEEEEecCcccccchhhcCChhhhhhcCCceEEEecCCHHH
Confidence 99998888999999999999999999999999999999999999743111000013588899888899999999999999
Q ss_pred hhhcccCCceeeccCchhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEec-------ccCHHHHHHHHHHHhcC
Q 018483 242 VLANDAVGGFWSHCGWNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELE-------EFEGGTIKKAIKRLMVD 314 (355)
Q Consensus 242 ~L~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~-------~~~~~~l~~ai~~~l~~ 314 (355)
||+|+++++|||||||||++||+++|||||++|+++||+.||+++++.+|+|+.+. .++.++|.++|+++|.+
T Consensus 350 iL~H~~v~~FvtH~G~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~~~~~~~~~v~~~~v~~~v~~vm~~ 429 (480)
T PLN02555 350 VLAHPSVACFVTHCGWNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLCRGEAENKLITREEVAECLLEATVG 429 (480)
T ss_pred HhCCCccCeEEecCCcchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEccCCccccCcCcHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999988789999992 58999999999999988
Q ss_pred chhHHHHHHHHHHHHHHhhhhhcCCChHHHHHHHHHHHHc
Q 018483 315 TEGKEMRKKAIHLKEKVELPLKEGGSCYNSLNDLVKKILS 354 (355)
Q Consensus 315 ~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~l~~ 354 (355)
++|+++|+||+++++++++|+.+||||+.++++||+++++
T Consensus 430 ~~g~~~r~ra~~l~~~a~~A~~egGSS~~~l~~~v~~i~~ 469 (480)
T PLN02555 430 EKAAELKQNALKWKEEAEAAVAEGGSSDRNFQEFVDKLVR 469 (480)
T ss_pred chHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHh
Confidence 7899999999999999999999999999999999999863
No 5
>PLN00164 glucosyltransferase; Provisional
Probab=100.00 E-value=1.9e-59 Score=451.65 Aligned_cols=342 Identities=32% Similarity=0.495 Sum_probs=275.2
Q ss_pred CccEEEeCCccchHHHHHHHcCCCeEEEecchHHHHHHHhhchhhhhcCccccccccccccCCCcccchhHHhhhhhhcc
Q 018483 10 RISCIVYDSTMCFSQSVADHLKLPGICVRTSPAATMLAFAVFPRLHEQGYISFLESMSLDRVSDLLSLMLKELAASMKKI 89 (355)
Q Consensus 10 ~~D~vI~D~~~~~~~~iA~~lgiP~i~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~v~~~~~~~~~~l~~~~~~~ 89 (355)
+++|||+|.++.|+..+|+++|||++.|+++++..+..+++.+........+.....-...+|+++.++..+++.... .
T Consensus 110 pv~cIV~D~f~~Wa~dVA~elgIP~v~F~t~sA~~~~~~~~~~~~~~~~~~~~~~~~~~~~iPGlp~l~~~dlp~~~~-~ 188 (480)
T PLN00164 110 PVAALVVDFFCTPLLDVARELAVPAYVYFTSTAAMLALMLRLPALDEEVAVEFEEMEGAVDVPGLPPVPASSLPAPVM-D 188 (480)
T ss_pred CceEEEECCcchhHHHHHHHhCCCEEEEECccHHHHHHHhhhhhhcccccCcccccCcceecCCCCCCChHHCCchhc-C
Confidence 579999999999999999999999999999999988887765432111000111111112478888888889886442 2
Q ss_pred CCchHHHHHHHHHhhhccCcEEEEcCccccchHHHHHHHHhh------CCCceecCcccccCCCcCCCCCcccchhhHhh
Q 018483 90 TTDGMLELRAAVADSVKKCSALIVNTVDFLEQEALTKVQELF------SASAFTIGPFHKLVPTISGSLLKEDTNCISWL 163 (355)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~l~nt~~~le~~~~~~~r~~~------~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~l 163 (355)
..+.....+....+...+++.+++||+.+||+.+++.++... .++++.|||++..... ....+.+.+|.+||
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~~~~~~~v~~vGPl~~~~~~--~~~~~~~~~~~~wL 266 (480)
T PLN00164 189 KKSPNYAWFVYHGRRFMEAAGIIVNTAAELEPGVLAAIADGRCTPGRPAPTVYPIGPVISLAFT--PPAEQPPHECVRWL 266 (480)
T ss_pred CCcHHHHHHHHHHHhhhhcCEEEEechHHhhHHHHHHHHhccccccCCCCceEEeCCCcccccc--CCCccchHHHHHHH
Confidence 222223333334455678999999999999999999998742 1469999999853211 11223455699999
Q ss_pred hccCCCceEEEeeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCcCC------CCcccCCChhhhhhcCCCCcee-ec
Q 018483 164 NKQAPKSVIYVSFGSIASIDEKELLETAWGLANCEQPFLWVVRPGLVRG------SNCLELLPINFQDSVGERGCIV-EW 236 (355)
Q Consensus 164 ~~~~~~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~------~~~~~~lp~~~~~~~~~~~~~~-~~ 236 (355)
|++++++||||||||...++.+++.+++.+|+.++++|||+++.....+ .+....+|+++.++++++++++ +|
T Consensus 267 d~~~~~svvyvsfGS~~~~~~~q~~ela~gL~~s~~~flWv~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w 346 (480)
T PLN00164 267 DAQPPASVVFLCFGSMGFFDAPQVREIAAGLERSGHRFLWVLRGPPAAGSRHPTDADLDELLPEGFLERTKGRGLVWPTW 346 (480)
T ss_pred HhCCCCceEEEEecccccCCHHHHHHHHHHHHHcCCCEEEEEcCCcccccccccccchhhhCChHHHHHhcCCCeEEeec
Confidence 9998999999999999888999999999999999999999998532110 0111248899999999998887 99
Q ss_pred CChHhhhhcccCCceeeccCchhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEec-------ccCHHHHHHHHH
Q 018483 237 APQKEVLANDAVGGFWSHCGWNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELE-------EFEGGTIKKAIK 309 (355)
Q Consensus 237 ~pq~~~L~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~-------~~~~~~l~~ai~ 309 (355)
+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++++.+|+|+.+. .++.++|+++|+
T Consensus 347 ~PQ~~iL~h~~vg~fvtH~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~~~~~~~~~e~l~~av~ 426 (480)
T PLN00164 347 APQKEILAHAAVGGFVTHCGWNSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDRKRDNFVEAAELERAVR 426 (480)
T ss_pred CCHHHHhcCcccCeEEeecccchHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEeccccccCCcCcHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998765589999985 268999999999
Q ss_pred HHhcCc--hhHHHHHHHHHHHHHHhhhhhcCCChHHHHHHHHHHHHc
Q 018483 310 RLMVDT--EGKEMRKKAIHLKEKVELPLKEGGSCYNSLNDLVKKILS 354 (355)
Q Consensus 310 ~~l~~~--~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~l~~ 354 (355)
++|.++ +|+.+|++|+++++++++|+.+||||+.++++|++++++
T Consensus 427 ~vm~~~~~~~~~~r~~a~~~~~~~~~a~~~gGSS~~~l~~~v~~~~~ 473 (480)
T PLN00164 427 SLMGGGEEEGRKAREKAAEMKAACRKAVEEGGSSYAALQRLAREIRH 473 (480)
T ss_pred HHhcCCchhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHh
Confidence 999874 489999999999999999999999999999999999864
No 6
>PLN03015 UDP-glucosyl transferase
Probab=100.00 E-value=2.2e-59 Score=445.41 Aligned_cols=337 Identities=26% Similarity=0.446 Sum_probs=272.0
Q ss_pred CccEEEeCCccchHHHHHHHcCCC-eEEEecchHHHHHHHhhchhhhhcCccccccccccccCCCcccchhHHhhhhhhc
Q 018483 10 RISCIVYDSTMCFSQSVADHLKLP-GICVRTSPAATMLAFAVFPRLHEQGYISFLESMSLDRVSDLLSLMLKELAASMKK 88 (355)
Q Consensus 10 ~~D~vI~D~~~~~~~~iA~~lgiP-~i~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~v~~~~~~~~~~l~~~~~~ 88 (355)
+++|||+|.++.|+.++|+++||| ++.|++++++....+++++......-.......-...+|+++.++..+++....
T Consensus 107 ~~~ciV~D~f~~w~~~vA~~lgIP~~~~f~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~vPg~p~l~~~dlp~~~~- 185 (470)
T PLN03015 107 KPTVMIVDFFGTALMSIADDVGVTAKYVYIPSHAWFLAVMVYLPVLDTVVEGEYVDIKEPLKIPGCKPVGPKELMETML- 185 (470)
T ss_pred CCeEEEEcCCcHHHHHHHHHcCCCEEEEEcCHHHHHHHHHHhhhhhhcccccccCCCCCeeeCCCCCCCChHHCCHhhc-
Confidence 689999999999999999999999 588889988877676665432111000000101113478888889999886442
Q ss_pred cCCch-HHHHHHHHHhhhccCcEEEEcCccccchHHHHHHHHhh------CCCceecCcccccCCCcCCCCCcccchhhH
Q 018483 89 ITTDG-MLELRAAVADSVKKCSALIVNTVDFLEQEALTKVQELF------SASAFTIGPFHKLVPTISGSLLKEDTNCIS 161 (355)
Q Consensus 89 ~~~~~-~~~~~~~~~~~~~~~~~~l~nt~~~le~~~~~~~r~~~------~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~ 161 (355)
..... +..+. +......+++.+++||+.+||+.+++.++..+ ++|+++|||++.... ....+.+|.+
T Consensus 186 ~~~~~~~~~~~-~~~~~~~~a~gvlvNTf~eLE~~~~~~l~~~~~~~~~~~~~v~~VGPl~~~~~-----~~~~~~~~~~ 259 (470)
T PLN03015 186 DRSDQQYKECV-RSGLEVPMSDGVLVNTWEELQGNTLAALREDMELNRVMKVPVYPIGPIVRTNV-----HVEKRNSIFE 259 (470)
T ss_pred CCCcHHHHHHH-HHHHhcccCCEEEEechHHHhHHHHHHHHhhcccccccCCceEEecCCCCCcc-----cccchHHHHH
Confidence 22222 33333 44455788999999999999999999998752 256999999985321 1112235999
Q ss_pred hhhccCCCceEEEeeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCc-------CCCCcccCCChhhhhhcCCCCcee
Q 018483 162 WLNKQAPKSVIYVSFGSIASIDEKELLETAWGLANCEQPFLWVVRPGLV-------RGSNCLELLPINFQDSVGERGCIV 234 (355)
Q Consensus 162 ~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~-------~~~~~~~~lp~~~~~~~~~~~~~~ 234 (355)
|||++++++||||||||...++.+++++++.+|+.++++|||+++.+.. +..+..+.+|+++.++++++++++
T Consensus 260 WLd~~~~~sVvyvsFGS~~~~~~~q~~ela~gl~~s~~~FlWv~r~~~~~~~~~~~~~~~~~~~lp~~f~er~~~rGl~v 339 (470)
T PLN03015 260 WLDKQGERSVVYVCLGSGGTLTFEQTVELAWGLELSGQRFVWVLRRPASYLGASSSDDDQVSASLPEGFLDRTRGVGLVV 339 (470)
T ss_pred HHHhCCCCCEEEEECCcCCcCCHHHHHHHHHHHHhCCCcEEEEEecCccccccccccccchhhcCChHHHHhhccCceEE
Confidence 9999989999999999999999999999999999999999999974311 000112358999999999999765
Q ss_pred -ecCChHhhhhcccCCceeeccCchhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEec------ccCHHHHHHH
Q 018483 235 -EWAPQKEVLANDAVGGFWSHCGWNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELE------EFEGGTIKKA 307 (355)
Q Consensus 235 -~~~pq~~~L~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~------~~~~~~l~~a 307 (355)
+|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||+++++.+|+|+.+. .++.++++++
T Consensus 340 ~~W~PQ~~vL~h~~vg~fvtH~GwnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~~~~~~~~~~~v~~e~i~~~ 419 (470)
T PLN03015 340 TQWAPQVEILSHRSIGGFLSHCGWSSVLESLTKGVPIVAWPLYAEQWMNATLLTEEIGVAVRTSELPSEKVIGREEVASL 419 (470)
T ss_pred EecCCHHHHhccCccCeEEecCCchhHHHHHHcCCCEEecccccchHHHHHHHHHHhCeeEEecccccCCccCHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999966699999993 4899999999
Q ss_pred HHHHhcC--chhHHHHHHHHHHHHHHhhhhhcCCChHHHHHHHHHHHH
Q 018483 308 IKRLMVD--TEGKEMRKKAIHLKEKVELPLKEGGSCYNSLNDLVKKIL 353 (355)
Q Consensus 308 i~~~l~~--~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~l~ 353 (355)
|+++|.+ ++|+++|+||+++++++++|+++||||+.++++|++.++
T Consensus 420 v~~lm~~~~eeg~~~R~ra~~lk~~a~~Av~eGGSS~~nl~~~~~~~~ 467 (470)
T PLN03015 420 VRKIVAEEDEEGQKIRAKAEEVRVSSERAWSHGGSSYNSLFEWAKRCY 467 (470)
T ss_pred HHHHHccCcccHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHhcc
Confidence 9999963 568999999999999999999999999999999998764
No 7
>PLN02562 UDP-glycosyltransferase
Probab=100.00 E-value=4.2e-59 Score=446.15 Aligned_cols=334 Identities=28% Similarity=0.493 Sum_probs=270.6
Q ss_pred CccEEEeCCccchHHHHHHHcCCCeEEEecchHHHHHHHhhchhhhhcCcccccc----ccccccCCCcccchhHHhhhh
Q 018483 10 RISCIVYDSTMCFSQSVADHLKLPGICVRTSPAATMLAFAVFPRLHEQGYISFLE----SMSLDRVSDLLSLMLKELAAS 85 (355)
Q Consensus 10 ~~D~vI~D~~~~~~~~iA~~lgiP~i~~~~~~~~~~~~~~~~~~~~~~~~~p~~~----~~~~~~v~~~~~~~~~~l~~~ 85 (355)
+++|||+|.++.|+.++|+++|||++.|+++++..+..+.+.+......+.+... ......+|+++.++..+++..
T Consensus 103 pv~cvI~D~~~~w~~~vA~~~giP~~~f~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pg~~~l~~~dl~~~ 182 (448)
T PLN02562 103 EVACMVVDLLASWAIGVADRCGVPVAGFWPVMLAAYRLIQAIPELVRTGLISETGCPRQLEKICVLPEQPLLSTEDLPWL 182 (448)
T ss_pred CcEEEEECCccHhHHHHHHHhCCCEEEEechhHHHHHHHHHHHHHhhccccccccccccccccccCCCCCCCChhhCcch
Confidence 5799999999999999999999999999999998777766544322222111111 011125788887888888864
Q ss_pred hhcc-CCchHHHHHHHHHhhhccCcEEEEcCccccchHHHHHHHHh----hCCCceecCcccccCCCc--CCCCCcccch
Q 018483 86 MKKI-TTDGMLELRAAVADSVKKCSALIVNTVDFLEQEALTKVQEL----FSASAFTIGPFHKLVPTI--SGSLLKEDTN 158 (355)
Q Consensus 86 ~~~~-~~~~~~~~~~~~~~~~~~~~~~l~nt~~~le~~~~~~~r~~----~~~~v~~vGpl~~~~~~~--~~~~~~~~~~ 158 (355)
.... ........+.+..+...+++.+++|||.+||+.+++.++.. ..+++++|||++...... ....++.+.+
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~~~~~v~~iGpl~~~~~~~~~~~~~~~~~~~ 262 (448)
T PLN02562 183 IGTPKARKARFKFWTRTLERTKSLRWILMNSFKDEEYDDVKNHQASYNNGQNPQILQIGPLHNQEATTITKPSFWEEDMS 262 (448)
T ss_pred hcCCCcchHHHHHHHHHHhccccCCEEEEcChhhhCHHHHHHHHhhhccccCCCEEEecCcccccccccCCCccccchHH
Confidence 3201 12233445555566677889999999999999988877642 234699999998754210 1112345566
Q ss_pred hhHhhhccCCCceEEEeecccc-ccCHHHHHHHHHHHHhCCCCEEEEEcCCCcCCCCcccCCChhhhhhcCCCCceeecC
Q 018483 159 CISWLNKQAPKSVIYVSFGSIA-SIDEKELLETAWGLANCEQPFLWVVRPGLVRGSNCLELLPINFQDSVGERGCIVEWA 237 (355)
Q Consensus 159 ~~~~l~~~~~~~~v~vs~GS~~-~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~ 237 (355)
|.+|||+++++++|||||||.. ..+.+++++++.+|++++++|||+++... ...+|+++.++.++|+++++|+
T Consensus 263 c~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~l~~~l~~~g~~fiW~~~~~~------~~~l~~~~~~~~~~~~~v~~w~ 336 (448)
T PLN02562 263 CLGWLQEQKPNSVIYISFGSWVSPIGESNVRTLALALEASGRPFIWVLNPVW------REGLPPGYVERVSKQGKVVSWA 336 (448)
T ss_pred HHHHHhcCCCCceEEEEecccccCCCHHHHHHHHHHHHHCCCCEEEEEcCCc------hhhCCHHHHHHhccCEEEEecC
Confidence 8999999888899999999986 47899999999999999999999997532 1248888988889999999999
Q ss_pred ChHhhhhcccCCceeeccCchhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEecccCHHHHHHHHHHHhcCchh
Q 018483 238 PQKEVLANDAVGGFWSHCGWNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFEGGTIKKAIKRLMVDTEG 317 (355)
Q Consensus 238 pq~~~L~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~l~~ai~~~l~~~~~ 317 (355)
||.+||+|+++++|||||||||++||+++|||+|++|+++||+.||+++++.+|+|+.+.+++.++++++|+++|+|
T Consensus 337 PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~l~~~v~~~l~~--- 413 (448)
T PLN02562 337 PQLEVLKHQAVGCYLTHCGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRISGFGQKEVEEGLRKVMED--- 413 (448)
T ss_pred CHHHHhCCCccceEEecCcchhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEeCCCCHHHHHHHHHHHhCC---
Confidence 99999999999999999999999999999999999999999999999998757999888888999999999999988
Q ss_pred HHHHHHHHHHHHHHhhhhhcCCChHHHHHHHHHHHH
Q 018483 318 KEMRKKAIHLKEKVELPLKEGGSCYNSLNDLVKKIL 353 (355)
Q Consensus 318 ~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~l~ 353 (355)
++||+||++++++++++ .+||||++++++||++++
T Consensus 414 ~~~r~~a~~l~~~~~~~-~~gGSS~~nl~~~v~~~~ 448 (448)
T PLN02562 414 SGMGERLMKLRERAMGE-EARLRSMMNFTTLKDELK 448 (448)
T ss_pred HHHHHHHHHHHHHHHhc-CCCCCHHHHHHHHHHHhC
Confidence 79999999999999877 567999999999999875
No 8
>PLN03004 UDP-glycosyltransferase
Probab=100.00 E-value=2.5e-59 Score=445.17 Aligned_cols=329 Identities=26% Similarity=0.489 Sum_probs=264.1
Q ss_pred CccEEEeCCccchHHHHHHHcCCCeEEEecchHHHHHHHhhchhhhhcCccccccccccccCCCcccchhHHhhhhhhcc
Q 018483 10 RISCIVYDSTMCFSQSVADHLKLPGICVRTSPAATMLAFAVFPRLHEQGYISFLESMSLDRVSDLLSLMLKELAASMKKI 89 (355)
Q Consensus 10 ~~D~vI~D~~~~~~~~iA~~lgiP~i~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~v~~~~~~~~~~l~~~~~~~ 89 (355)
+++|||+|.++.|+..+|+++|||++.|++++++.+..+.+.+........+.........+|+++.++..+++.... .
T Consensus 112 pv~cII~D~~~~Wa~~vA~~lgIP~v~F~t~sA~~~~~~~~~~~~~~~~~~~~~~~~~~v~iPg~p~l~~~dlp~~~~-~ 190 (451)
T PLN03004 112 NVRAMIIDFFCTAVLDITADFTFPVYFFYTSGAACLAFSFYLPTIDETTPGKNLKDIPTVHIPGVPPMKGSDMPKAVL-E 190 (451)
T ss_pred CceEEEECCcchhHHHHHHHhCCCEEEEeCHhHHHHHHHHHHHhccccccccccccCCeecCCCCCCCChHHCchhhc-C
Confidence 579999999999999999999999999999999988888764421111000000011113578888888899886542 2
Q ss_pred CCchHHHHHHHHHhhhccCcEEEEcCccccchHHHHHHHHhhC-CCceecCcccccCCCcCCCCCcccchhhHhhhccCC
Q 018483 90 TTDGMLELRAAVADSVKKCSALIVNTVDFLEQEALTKVQELFS-ASAFTIGPFHKLVPTISGSLLKEDTNCISWLNKQAP 168 (355)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~l~nt~~~le~~~~~~~r~~~~-~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~l~~~~~ 168 (355)
..+.....+.+......+++.+++|||++||+.+++.+++.+. +|++.|||++......... ...+.+|.+|||++++
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~vl~NTf~eLE~~~l~~l~~~~~~~~v~~vGPl~~~~~~~~~~-~~~~~~c~~wLd~~~~ 269 (451)
T PLN03004 191 RDDEVYDVFIMFGKQLSKSSGIIINTFDALENRAIKAITEELCFRNIYPIGPLIVNGRIEDRN-DNKAVSCLNWLDSQPE 269 (451)
T ss_pred CchHHHHHHHHHHHhhcccCeeeeeeHHHhHHHHHHHHHhcCCCCCEEEEeeeccCccccccc-cchhhHHHHHHHhCCC
Confidence 2223344455555667788999999999999999999987543 5799999998532210011 1223459999999989
Q ss_pred CceEEEeeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCcCCCC--ccc-CCChhhhhhcCCCCce-eecCChHhhhh
Q 018483 169 KSVIYVSFGSIASIDEKELLETAWGLANCEQPFLWVVRPGLVRGSN--CLE-LLPINFQDSVGERGCI-VEWAPQKEVLA 244 (355)
Q Consensus 169 ~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~--~~~-~lp~~~~~~~~~~~~~-~~~~pq~~~L~ 244 (355)
++||||||||...++.+++++++.+|+.++++|||+++.......+ ... .+|++|++++++++++ .+|+||.+||+
T Consensus 270 ~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~~FlW~~r~~~~~~~~~~~~~~~lp~gf~er~~~~g~~v~~W~PQ~~iL~ 349 (451)
T PLN03004 270 KSVVFLCFGSLGLFSKEQVIEIAVGLEKSGQRFLWVVRNPPELEKTELDLKSLLPEGFLSRTEDKGMVVKSWAPQVPVLN 349 (451)
T ss_pred CceEEEEecccccCCHHHHHHHHHHHHHCCCCEEEEEcCCccccccccchhhhCChHHHHhccCCcEEEEeeCCHHHHhC
Confidence 9999999999988999999999999999999999999853110000 012 2889999999887765 49999999999
Q ss_pred cccCCceeeccCchhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEec-----ccCHHHHHHHHHHHhcCchhHH
Q 018483 245 NDAVGGFWSHCGWNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELE-----EFEGGTIKKAIKRLMVDTEGKE 319 (355)
Q Consensus 245 ~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~-----~~~~~~l~~ai~~~l~~~~~~~ 319 (355)
|+++++|||||||||++||+++|||+|++|+++||+.||+++++++|+|+.++ .++.++|+++|+++|++ ++
T Consensus 350 H~~v~~FvTH~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~~~~e~l~~av~~vm~~---~~ 426 (451)
T PLN03004 350 HKAVGGFVTHCGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISMNESETGFVSSTEVEKRVQEIIGE---CP 426 (451)
T ss_pred CCccceEeccCcchHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEecCCcCCccCHHHHHHHHHHHhcC---HH
Confidence 99999999999999999999999999999999999999999986589999996 36999999999999988 78
Q ss_pred HHHHHHHHHHHHhhhhhcCCChHH
Q 018483 320 MRKKAIHLKEKVELPLKEGGSCYN 343 (355)
Q Consensus 320 ~~~~a~~l~~~~~~a~~~~g~~~~ 343 (355)
||++|++++++.++|+++||||++
T Consensus 427 ~r~~a~~~~~~a~~Av~~GGSS~~ 450 (451)
T PLN03004 427 VRERTMAMKNAAELALTETGSSHT 450 (451)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCC
Confidence 999999999999999999999874
No 9
>PLN02173 UDP-glucosyl transferase family protein
Probab=100.00 E-value=8.9e-59 Score=441.11 Aligned_cols=325 Identities=31% Similarity=0.524 Sum_probs=266.5
Q ss_pred CccEEEeCCccchHHHHHHHcCCCeEEEecchHHHHHHHhhchhhhhcCccccccccccccCCCcccchhHHhhhhhhc-
Q 018483 10 RISCIVYDSTMCFSQSVADHLKLPGICVRTSPAATMLAFAVFPRLHEQGYISFLESMSLDRVSDLLSLMLKELAASMKK- 88 (355)
Q Consensus 10 ~~D~vI~D~~~~~~~~iA~~lgiP~i~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~v~~~~~~~~~~l~~~~~~- 88 (355)
+++|||+|.++.|+..+|+++|||++.|++++++.+..+++ ... ... .....+|+++.++..+++.....
T Consensus 104 Pv~cvV~D~f~~Wa~dVA~elgIP~v~F~~~~a~~~~~~~~-~~~-~~~-------~~~~~~pg~p~l~~~dlp~~~~~~ 174 (449)
T PLN02173 104 PITCIVYDSFMPWALDLAREFGLAAAPFFTQSCAVNYINYL-SYI-NNG-------SLTLPIKDLPLLELQDLPTFVTPT 174 (449)
T ss_pred CceEEEECCcchhHHHHHHHhCCCEEEEechHHHHHHHHHh-HHh-ccC-------CccCCCCCCCCCChhhCChhhcCC
Confidence 34999999999999999999999999999998887765543 111 010 11234678888888888865421
Q ss_pred cCCchHHHHHHHHHhhhccCcEEEEcCccccchHHHHHHHHhhCCCceecCcccccC-----C-CcCC---CCC--cccc
Q 018483 89 ITTDGMLELRAAVADSVKKCSALIVNTVDFLEQEALTKVQELFSASAFTIGPFHKLV-----P-TISG---SLL--KEDT 157 (355)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~l~nt~~~le~~~~~~~r~~~~~~v~~vGpl~~~~-----~-~~~~---~~~--~~~~ 157 (355)
...+...+.+.+......+++.+++||+.+||+++++.++.. +|++.|||+++.. . .... +.+ .+++
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~--~~v~~VGPl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (449)
T PLN02173 175 GSHLAYFEMVLQQFTNFDKADFVLVNSFHDLDLHENELLSKV--CPVLTIGPTVPSMYLDQQIKSDNDYDLNLFDLKEAA 252 (449)
T ss_pred CCchHHHHHHHHHHhhhccCCEEEEeCHHHhhHHHHHHHHhc--CCeeEEcccCchhhccccccccccccccccccccch
Confidence 122234444445556677899999999999999999999764 4799999997431 0 0000 111 2234
Q ss_pred hhhHhhhccCCCceEEEeeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCcCCCCcccCCChhhhhhc-CCCCceeec
Q 018483 158 NCISWLNKQAPKSVIYVSFGSIASIDEKELLETAWGLANCEQPFLWVVRPGLVRGSNCLELLPINFQDSV-GERGCIVEW 236 (355)
Q Consensus 158 ~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~-~~~~~~~~~ 236 (355)
+|.+|||.++++++|||||||....+.+++.+++.+| ++.+|+|+++... ...+|+++.++. ++|+++++|
T Consensus 253 ~c~~WLd~~~~~svvyvsfGS~~~~~~~~~~ela~gL--s~~~flWvvr~~~------~~~lp~~~~~~~~~~~~~i~~W 324 (449)
T PLN02173 253 LCTDWLDKRPQGSVVYIAFGSMAKLSSEQMEEIASAI--SNFSYLWVVRASE------ESKLPPGFLETVDKDKSLVLKW 324 (449)
T ss_pred HHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHh--cCCCEEEEEeccc------hhcccchHHHhhcCCceEEeCC
Confidence 5999999998999999999999999999999999999 6788999998532 134788888887 577888999
Q ss_pred CChHhhhhcccCCceeeccCchhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEec------ccCHHHHHHHHHH
Q 018483 237 APQKEVLANDAVGGFWSHCGWNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELE------EFEGGTIKKAIKR 310 (355)
Q Consensus 237 ~pq~~~L~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~------~~~~~~l~~ai~~ 310 (355)
+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||+++++.||+|+.+. .++.++|+++|++
T Consensus 325 ~PQ~~iL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~~~~~~~~~~e~v~~av~~ 404 (449)
T PLN02173 325 SPQLQVLSNKAIGCFMTHCGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKAEKESGIAKREEIEFSIKE 404 (449)
T ss_pred CCHHHHhCCCccceEEecCccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEeecccCCcccHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999998679999985 2589999999999
Q ss_pred HhcCchhHHHHHHHHHHHHHHhhhhhcCCChHHHHHHHHHHHH
Q 018483 311 LMVDTEGKEMRKKAIHLKEKVELPLKEGGSCYNSLNDLVKKIL 353 (355)
Q Consensus 311 ~l~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~l~ 353 (355)
+|.+++|+++|+||+++++++++|+.+||||+.++++|++++.
T Consensus 405 vm~~~~~~~~r~~a~~~~~~a~~Av~~gGSS~~~l~~~v~~~~ 447 (449)
T PLN02173 405 VMEGEKSKEMKENAGKWRDLAVKSLSEGGSTDININTFVSKIQ 447 (449)
T ss_pred HhcCChHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHhc
Confidence 9998778999999999999999999999999999999999875
No 10
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=1.8e-58 Score=443.73 Aligned_cols=343 Identities=23% Similarity=0.381 Sum_probs=272.4
Q ss_pred CccEEEeCCccchHHHHHHHcCCCeEEEecchHHHHHHHhhchhhhhcCcccccc-ccc-cccCCCcccchhHHhhhhhh
Q 018483 10 RISCIVYDSTMCFSQSVADHLKLPGICVRTSPAATMLAFAVFPRLHEQGYISFLE-SMS-LDRVSDLLSLMLKELAASMK 87 (355)
Q Consensus 10 ~~D~vI~D~~~~~~~~iA~~lgiP~i~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~-~~~v~~~~~~~~~~l~~~~~ 87 (355)
+++|||+|.++.|+.++|+++|||++.|++++++.++.++++....+....+... ... ...+|+++.++..+++....
T Consensus 114 ~p~cvI~D~f~~Wa~dVA~e~GIP~~~F~t~sA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iPg~~~~~~~dlp~~~~ 193 (477)
T PLN02863 114 PPVAIISDMFLGWTQNLACQLGIRRFVFSPSGAMALSIMYSLWREMPTKINPDDQNEILSFSKIPNCPKYPWWQISSLYR 193 (477)
T ss_pred CCeEEEEcCchHhHHHHHHHcCCCEEEEeccCHHHHHHHHHHhhcccccccccccccccccCCCCCCCCcChHhCchhhh
Confidence 6899999999999999999999999999999999998887654211110001000 111 12468888888888885431
Q ss_pred c-cCCchHHHHHHHHHhhhccCcEEEEcCccccchHHHHHHHHhhC-CCceecCcccccCCC-----cC-CCCCcccchh
Q 018483 88 K-ITTDGMLELRAAVADSVKKCSALIVNTVDFLEQEALTKVQELFS-ASAFTIGPFHKLVPT-----IS-GSLLKEDTNC 159 (355)
Q Consensus 88 ~-~~~~~~~~~~~~~~~~~~~~~~~l~nt~~~le~~~~~~~r~~~~-~~v~~vGpl~~~~~~-----~~-~~~~~~~~~~ 159 (355)
. ...+.....+.+.......++.+++||+++||+.+++.++..++ +|+++|||++..... .. .+....+++|
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~~v~~IGPL~~~~~~~~~~~~~~~~~~~~~~~~ 273 (477)
T PLN02863 194 SYVEGDPAWEFIKDSFRANIASWGLVVNSFTELEGIYLEHLKKELGHDRVWAVGPILPLSGEKSGLMERGGPSSVSVDDV 273 (477)
T ss_pred ccCccchHHHHHHHHHhhhccCCEEEEecHHHHHHHHHHHHHhhcCCCCeEEeCCCcccccccccccccCCcccccHHHH
Confidence 0 12223344444444445678899999999999999999998765 579999999754321 00 0111123469
Q ss_pred hHhhhccCCCceEEEeeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCcCCCCcccCCChhhhhhcCCCCcee-ecCC
Q 018483 160 ISWLNKQAPKSVIYVSFGSIASIDEKELLETAWGLANCEQPFLWVVRPGLVRGSNCLELLPINFQDSVGERGCIV-EWAP 238 (355)
Q Consensus 160 ~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~-~~~p 238 (355)
.+|||.+++++||||||||....+.+++++++.+|+.++++|||+++...... .....+|+++.+++.++++++ +|+|
T Consensus 274 ~~WLd~~~~~svVyvsfGS~~~~~~~~~~ela~gL~~~~~~flw~~~~~~~~~-~~~~~lp~~~~~r~~~~g~~v~~w~P 352 (477)
T PLN02863 274 MTWLDTCEDHKVVYVCFGSQVVLTKEQMEALASGLEKSGVHFIWCVKEPVNEE-SDYSNIPSGFEDRVAGRGLVIRGWAP 352 (477)
T ss_pred HHHHhcCCCCceEEEEeeceecCCHHHHHHHHHHHHhCCCcEEEEECCCcccc-cchhhCCHHHHHHhccCCEEecCCCC
Confidence 99999998899999999999999999999999999999999999998532111 112358899988887777665 9999
Q ss_pred hHhhhhcccCCceeeccCchhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEec-----ccCHHHHHHHHHHHhc
Q 018483 239 QKEVLANDAVGGFWSHCGWNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELE-----EFEGGTIKKAIKRLMV 313 (355)
Q Consensus 239 q~~~L~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~-----~~~~~~l~~ai~~~l~ 313 (355)
|.+||+|+++++|||||||||++||+++|||+|++|+++||+.||+++++++|+|+.+. ..+.+++.++|+++|.
T Consensus 353 Q~~vL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~~~~~~~~~~~v~~~v~~~m~ 432 (477)
T PLN02863 353 QVAILSHRAVGAFLTHCGWNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCEGADTVPDSDELARVFMESVS 432 (477)
T ss_pred HHHHhcCCCcCeEEecCCchHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEeccCCCCCcCHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999876589999994 3689999999999994
Q ss_pred CchhHHHHHHHHHHHHHHhhhhhcCCChHHHHHHHHHHHHcC
Q 018483 314 DTEGKEMRKKAIHLKEKVELPLKEGGSCYNSLNDLVKKILSF 355 (355)
Q Consensus 314 ~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~l~~~ 355 (355)
+ +++||+||+++++.+++|+.+||||+.++++|++.++++
T Consensus 433 ~--~~~~r~~a~~l~e~a~~Av~~gGSS~~~l~~~v~~i~~~ 472 (477)
T PLN02863 433 E--NQVERERAKELRRAALDAIKERGSSVKDLDGFVKHVVEL 472 (477)
T ss_pred c--cHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHh
Confidence 2 389999999999999999999999999999999998753
No 11
>PLN02210 UDP-glucosyl transferase
Probab=100.00 E-value=1.4e-58 Score=442.96 Aligned_cols=334 Identities=28% Similarity=0.495 Sum_probs=267.9
Q ss_pred CCccEEEeCCccchHHHHHHHcCCCeEEEecchHHHHHHHhhchhhhhcCccccccc-cccccCCCcccchhHHhhhhhh
Q 018483 9 DRISCIVYDSTMCFSQSVADHLKLPGICVRTSPAATMLAFAVFPRLHEQGYISFLES-MSLDRVSDLLSLMLKELAASMK 87 (355)
Q Consensus 9 ~~~D~vI~D~~~~~~~~iA~~lgiP~i~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~v~~~~~~~~~~l~~~~~ 87 (355)
.+|||||+|.++.|+..+|+++|||++.|+++++..+..+.+++... ...+...+ .-...+|+++.++..+++....
T Consensus 102 ~~~~~vI~D~~~~w~~~vA~~lgIP~~~f~~~sa~~~~~~~~~~~~~--~~~~~~~~~~~~~~~Pgl~~~~~~dl~~~~~ 179 (456)
T PLN02210 102 KRYSCIISSPFTPWVPAVAAAHNIPCAILWIQACGAYSVYYRYYMKT--NSFPDLEDLNQTVELPALPLLEVRDLPSFML 179 (456)
T ss_pred CCCcEEEECCcchhHHHHHHHhCCCEEEEecccHHHHHHHHhhhhcc--CCCCcccccCCeeeCCCCCCCChhhCChhhh
Confidence 47999999999999999999999999999999998887766532111 11111110 0113477887778888876442
Q ss_pred ccCCch-HHHHHHHHHhhhccCcEEEEcCccccchHHHHHHHHhhCCCceecCcccccC----CCc---CC---CCCccc
Q 018483 88 KITTDG-MLELRAAVADSVKKCSALIVNTVDFLEQEALTKVQELFSASAFTIGPFHKLV----PTI---SG---SLLKED 156 (355)
Q Consensus 88 ~~~~~~-~~~~~~~~~~~~~~~~~~l~nt~~~le~~~~~~~r~~~~~~v~~vGpl~~~~----~~~---~~---~~~~~~ 156 (355)
..... +.....+.......++.+++||+.++|+++++.+++. +++++|||++... ... .. +.+..+
T Consensus 180 -~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~~--~~v~~VGPl~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (456)
T PLN02210 180 -PSGGAHFNNLMAEFADCLRYVKWVLVNSFYELESEIIESMADL--KPVIPIGPLVSPFLLGDDEEETLDGKNLDMCKSD 256 (456)
T ss_pred -cCCchHHHHHHHHHHHhcccCCEEEEeCHHHHhHHHHHHHhhc--CCEEEEcccCchhhcCcccccccccccccccccc
Confidence 22222 2233334444556789999999999999999998873 5799999997521 110 00 012345
Q ss_pred chhhHhhhccCCCceEEEeeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCcCCCCcccCCChhhhhhc-CCCCceee
Q 018483 157 TNCISWLNKQAPKSVIYVSFGSIASIDEKELLETAWGLANCEQPFLWVVRPGLVRGSNCLELLPINFQDSV-GERGCIVE 235 (355)
Q Consensus 157 ~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~-~~~~~~~~ 235 (355)
.+|.+|||+++++++|||||||....+.+++++++.+|+.++++|||+++.... ...+..+.++. ++|+++++
T Consensus 257 ~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~e~a~~l~~~~~~flw~~~~~~~------~~~~~~~~~~~~~~~g~v~~ 330 (456)
T PLN02210 257 DCCMEWLDKQARSSVVYISFGSMLESLENQVETIAKALKNRGVPFLWVIRPKEK------AQNVQVLQEMVKEGQGVVLE 330 (456)
T ss_pred hHHHHHHhCCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEeCCcc------ccchhhHHhhccCCCeEEEe
Confidence 569999999888999999999999889999999999999999999999975321 11234455555 47888899
Q ss_pred cCChHhhhhcccCCceeeccCchhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEec------ccCHHHHHHHHH
Q 018483 236 WAPQKEVLANDAVGGFWSHCGWNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELE------EFEGGTIKKAIK 309 (355)
Q Consensus 236 ~~pq~~~L~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~------~~~~~~l~~ai~ 309 (355)
|+||.+||+|+++++|||||||||++||+++|||+|++|+++||+.||+++++.+|+|+.++ .++.++|+++|+
T Consensus 331 w~PQ~~iL~h~~vg~FitH~G~nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~~~~~l~~av~ 410 (456)
T PLN02210 331 WSPQEKILSHMAISCFVTHCGWNSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAVDGELKVEEVERCIE 410 (456)
T ss_pred cCCHHHHhcCcCcCeEEeeCCcccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccccCCcCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999987689999995 389999999999
Q ss_pred HHhcCchhHHHHHHHHHHHHHHhhhhhcCCChHHHHHHHHHHHH
Q 018483 310 RLMVDTEGKEMRKKAIHLKEKVELPLKEGGSCYNSLNDLVKKIL 353 (355)
Q Consensus 310 ~~l~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~l~ 353 (355)
++|.+++|+++|+||+++++.+++|+++||||+.++++|++.++
T Consensus 411 ~~m~~~~g~~~r~~a~~l~~~a~~Av~~gGSS~~~l~~~v~~~~ 454 (456)
T PLN02210 411 AVTEGPAAADIRRRAAELKHVARLALAPGGSSARNLDLFISDIT 454 (456)
T ss_pred HHhcCchHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHh
Confidence 99988778899999999999999999999999999999999886
No 12
>PLN02534 UDP-glycosyltransferase
Probab=100.00 E-value=4.3e-58 Score=440.46 Aligned_cols=341 Identities=26% Similarity=0.511 Sum_probs=266.2
Q ss_pred CccEEEeCCccchHHHHHHHcCCCeEEEecchHHHHHHHhhchhhhhcCccccccccccccCCCccc---chhHHhhhhh
Q 018483 10 RISCIVYDSTMCFSQSVADHLKLPGICVRTSPAATMLAFAVFPRLHEQGYISFLESMSLDRVSDLLS---LMLKELAASM 86 (355)
Q Consensus 10 ~~D~vI~D~~~~~~~~iA~~lgiP~i~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~v~~~~~---~~~~~l~~~~ 86 (355)
+++|||+|.++.|+..+|+++|||+++|++++++....++.+....+ ..+.........+|+++. ++..+++...
T Consensus 119 pp~cIV~D~f~~Wa~dVA~~lgIP~v~F~t~~a~~~~~~~~~~~~~~--~~~~~~~~~~~~iPg~p~~~~l~~~dlp~~~ 196 (491)
T PLN02534 119 PPSCIISDKCLSWTSKTAQRFNIPRIVFHGMCCFSLLSSHNIRLHNA--HLSVSSDSEPFVVPGMPQSIEITRAQLPGAF 196 (491)
T ss_pred CCcEEEECCccHHHHHHHHHhCCCeEEEecchHHHHHHHHHHHHhcc--cccCCCCCceeecCCCCccccccHHHCChhh
Confidence 68999999999999999999999999999999988776543211111 111111112234677763 6777777543
Q ss_pred hccCCchHHHHHHHHHhhhccCcEEEEcCccccchHHHHHHHHhhCCCceecCcccccCCCc-----CCCCCc-ccchhh
Q 018483 87 KKITTDGMLELRAAVADSVKKCSALIVNTVDFLEQEALTKVQELFSASAFTIGPFHKLVPTI-----SGSLLK-EDTNCI 160 (355)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~l~nt~~~le~~~~~~~r~~~~~~v~~vGpl~~~~~~~-----~~~~~~-~~~~~~ 160 (355)
. .......+.....+....++.+++|||.+||+.+++.++..++++++.|||++...... +..... ++.+|.
T Consensus 197 ~--~~~~~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~l~~l~~~~~~~v~~VGPL~~~~~~~~~~~~~~~~~~~~~~~cl 274 (491)
T PLN02534 197 V--SLPDLDDVRNKMREAESTAFGVVVNSFNELEHGCAEAYEKAIKKKVWCVGPVSLCNKRNLDKFERGNKASIDETQCL 274 (491)
T ss_pred c--CcccHHHHHHHHHhhcccCCEEEEecHHHhhHHHHHHHHhhcCCcEEEECcccccccccccccccCCccccchHHHH
Confidence 1 11122333333333344578999999999999999999887667899999997532110 001111 234599
Q ss_pred HhhhccCCCceEEEeeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCcCCCCcccCCChhhhhhcCCCCce-eecCCh
Q 018483 161 SWLNKQAPKSVIYVSFGSIASIDEKELLETAWGLANCEQPFLWVVRPGLVRGSNCLELLPINFQDSVGERGCI-VEWAPQ 239 (355)
Q Consensus 161 ~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~-~~~~pq 239 (355)
+|||.+++++||||||||......+++.+++.+|+.++++|||+++.+..........+|++|.+++.+++++ .+|+||
T Consensus 275 ~wLd~~~~~sVvyvsfGS~~~~~~~q~~e~a~gl~~~~~~flW~~r~~~~~~~~~~~~~p~gf~~~~~~~g~~v~~w~pq 354 (491)
T PLN02534 275 EWLDSMKPRSVIYACLGSLCRLVPSQLIELGLGLEASKKPFIWVIKTGEKHSELEEWLVKENFEERIKGRGLLIKGWAPQ 354 (491)
T ss_pred HHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEecCccccchhhhcCchhhHHhhccCCeeccCCCCH
Confidence 9999998899999999999999999999999999999999999998531111000113688998787666655 599999
Q ss_pred HhhhhcccCCceeeccCchhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEec---------------ccCHHHH
Q 018483 240 KEVLANDAVGGFWSHCGWNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELE---------------EFEGGTI 304 (355)
Q Consensus 240 ~~~L~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~---------------~~~~~~l 304 (355)
.+||+|+++++|||||||||++||+++|||+|++|+++||+.||+++++.||+|+.+. .++.++|
T Consensus 355 ~~iL~h~~v~~fvtH~G~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~e~~~vGv~~~~~~~~~~~~~~~~~~~v~~eev 434 (491)
T PLN02534 355 VLILSHPAIGGFLTHCGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIGVRVGVEVPVRWGDEERVGVLVKKDEV 434 (491)
T ss_pred HHHhcCCccceEEecCccHHHHHHHHcCCCEEeccccccHHHHHHHHHHhhcceEEecccccccccccccccCccCHHHH
Confidence 9999999999999999999999999999999999999999999999988799999873 1689999
Q ss_pred HHHHHHHhc--CchhHHHHHHHHHHHHHHhhhhhcCCChHHHHHHHHHHHHc
Q 018483 305 KKAIKRLMV--DTEGKEMRKKAIHLKEKVELPLKEGGSCYNSLNDLVKKILS 354 (355)
Q Consensus 305 ~~ai~~~l~--~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~l~~ 354 (355)
+++|+++|. +++|+++|+||+++++++++|+.+||||++++++||+++++
T Consensus 435 ~~~v~~~m~~~~eeg~~~R~rA~elk~~a~~Av~~GGSS~~nl~~fv~~i~~ 486 (491)
T PLN02534 435 EKAVKTLMDDGGEEGERRRRRAQELGVMARKAMELGGSSHINLSILIQDVLK 486 (491)
T ss_pred HHHHHHHhccccccHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHH
Confidence 999999997 45589999999999999999999999999999999999874
No 13
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=100.00 E-value=2.9e-58 Score=438.33 Aligned_cols=330 Identities=28% Similarity=0.504 Sum_probs=266.3
Q ss_pred CccEEEeCCccchHHHHHHHcCCCeEEEecchHHHHHHHhhchhhhhcCccccccccccccCCCcccchhHHhhhhhhc-
Q 018483 10 RISCIVYDSTMCFSQSVADHLKLPGICVRTSPAATMLAFAVFPRLHEQGYISFLESMSLDRVSDLLSLMLKELAASMKK- 88 (355)
Q Consensus 10 ~~D~vI~D~~~~~~~~iA~~lgiP~i~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~v~~~~~~~~~~l~~~~~~- 88 (355)
+++|||+|.++.|+.++|+++|||++.|++++++.+..++++.... .....+|+++.++..++|.....
T Consensus 106 pv~ciV~D~~~~wa~dvA~~lgIP~~~f~t~~a~~~~~~~~~~~~~----------~~~~~iPglp~l~~~dlp~~~~~~ 175 (455)
T PLN02152 106 PVTCLIYTILPNWAPKVARRFHLPSVLLWIQPAFVFDIYYNYSTGN----------NSVFEFPNLPSLEIRDLPSFLSPS 175 (455)
T ss_pred CceEEEECCccHhHHHHHHHhCCCEEEEECccHHHHHHHHHhhccC----------CCeeecCCCCCCchHHCchhhcCC
Confidence 5799999999999999999999999999999999888876543110 01234788888888888865420
Q ss_pred cCCchHHHHHHHHHhhhc--cCcEEEEcCccccchHHHHHHHHhhCCCceecCcccccCC--CcC-CC--C-Ccccchhh
Q 018483 89 ITTDGMLELRAAVADSVK--KCSALIVNTVDFLEQEALTKVQELFSASAFTIGPFHKLVP--TIS-GS--L-LKEDTNCI 160 (355)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~--~~~~~l~nt~~~le~~~~~~~r~~~~~~v~~vGpl~~~~~--~~~-~~--~-~~~~~~~~ 160 (355)
...+.....+.+..+... .++.+++|||++||+.+++.++. .|++.|||+++... ... +. . ...+.+|.
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~---~~v~~VGPL~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (455)
T PLN02152 176 NTNKAAQAVYQELMEFLKEESNPKILVNTFDSLEPEFLTAIPN---IEMVAVGPLLPAEIFTGSESGKDLSVRDQSSSYT 252 (455)
T ss_pred CCchhHHHHHHHHHHHhhhccCCEEEEeChHHhhHHHHHhhhc---CCEEEEcccCccccccccccCccccccccchHHH
Confidence 112223344444444333 35799999999999999999876 36999999975321 100 01 1 12234699
Q ss_pred HhhhccCCCceEEEeeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCcC-----CC-CcccCCChhhhhhcCCCCcee
Q 018483 161 SWLNKQAPKSVIYVSFGSIASIDEKELLETAWGLANCEQPFLWVVRPGLVR-----GS-NCLELLPINFQDSVGERGCIV 234 (355)
Q Consensus 161 ~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~-----~~-~~~~~lp~~~~~~~~~~~~~~ 234 (355)
+|||++++++||||||||...++.+++++++.+|+.++++|||+++.+... .. +....+|+++.++.++|+++.
T Consensus 253 ~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flWv~r~~~~~~~~~~~~~~~~~~~~~~f~e~~~~~g~v~ 332 (455)
T PLN02152 253 LWLDSKTESSVIYVSFGTMVELSKKQIEELARALIEGKRPFLWVITDKLNREAKIEGEEETEIEKIAGFRHELEEVGMIV 332 (455)
T ss_pred HHhhCCCCCceEEEEecccccCCHHHHHHHHHHHHHcCCCeEEEEecCcccccccccccccccccchhHHHhccCCeEEE
Confidence 999998889999999999999999999999999999999999999853110 00 001124788988999999999
Q ss_pred ecCChHhhhhcccCCceeeccCchhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEec-----ccCHHHHHHHHH
Q 018483 235 EWAPQKEVLANDAVGGFWSHCGWNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELE-----EFEGGTIKKAIK 309 (355)
Q Consensus 235 ~~~pq~~~L~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~-----~~~~~~l~~ai~ 309 (355)
+|+||.+||+|+++++|||||||||++||+++|||+|++|+++||+.||+++++.+|+|+.+. .++.++|+++|+
T Consensus 333 ~W~PQ~~iL~h~~vg~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~e~l~~av~ 412 (455)
T PLN02152 333 SWCSQIEVLRHRAVGCFVTHCGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVRENSEGLVERGEIRRCLE 412 (455)
T ss_pred eeCCHHHHhCCcccceEEeeCCcccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEeecCcCCcCcHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999988667877774 369999999999
Q ss_pred HHhcCchhHHHHHHHHHHHHHHhhhhhcCCChHHHHHHHHHHHH
Q 018483 310 RLMVDTEGKEMRKKAIHLKEKVELPLKEGGSCYNSLNDLVKKIL 353 (355)
Q Consensus 310 ~~l~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~l~ 353 (355)
++|++ ++.+||+||+++++.+++++.+||||+.++++|+++++
T Consensus 413 ~vm~~-~~~~~r~~a~~~~~~~~~a~~~ggsS~~nl~~li~~i~ 455 (455)
T PLN02152 413 AVMEE-KSVELRESAEKWKRLAIEAGGEGGSSDKNVEAFVKTLC 455 (455)
T ss_pred HHHhh-hHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHhC
Confidence 99975 35689999999999999999999999999999999874
No 14
>PLN02167 UDP-glycosyltransferase family protein
Probab=100.00 E-value=3.7e-58 Score=443.51 Aligned_cols=339 Identities=27% Similarity=0.448 Sum_probs=268.5
Q ss_pred CccEEEeCCccchHHHHHHHcCCCeEEEecchHHHHHHHhhchhhhhcCccccc--cccccccCCCc-ccchhHHhhhhh
Q 018483 10 RISCIVYDSTMCFSQSVADHLKLPGICVRTSPAATMLAFAVFPRLHEQGYISFL--ESMSLDRVSDL-LSLMLKELAASM 86 (355)
Q Consensus 10 ~~D~vI~D~~~~~~~~iA~~lgiP~i~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~~v~~~-~~~~~~~l~~~~ 86 (355)
+++|||+|.++.|+.++|+++|||++.|++++++.+..+++++........... ...-...+|++ +.++..+++...
T Consensus 118 pv~cvV~D~f~~Wa~dVA~elgIP~v~F~t~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iPgl~~~l~~~dlp~~~ 197 (475)
T PLN02167 118 RVAGLVLDFFCVPLIDVGNEFNLPSYIFLTCNAGFLGMMKYLPERHRKTASEFDLSSGEEELPIPGFVNSVPTKVLPPGL 197 (475)
T ss_pred CeEEEEECCccHHHHHHHHHhCCCEEEEECccHHHHHHHHHHHHhccccccccccCCCCCeeECCCCCCCCChhhCchhh
Confidence 569999999999999999999999999999999888877654421111000000 00011247887 457777877533
Q ss_pred hccCCchHHHHHHHHHhhhccCcEEEEcCccccchHHHHHHHHhhC--CCceecCcccccCCCcCCCCC--cccchhhHh
Q 018483 87 KKITTDGMLELRAAVADSVKKCSALIVNTVDFLEQEALTKVQELFS--ASAFTIGPFHKLVPTISGSLL--KEDTNCISW 162 (355)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~l~nt~~~le~~~~~~~r~~~~--~~v~~vGpl~~~~~~~~~~~~--~~~~~~~~~ 162 (355)
. .. . ....+.+..+...+++.+++|||++||+++++.++...+ +++++|||+++..... ...+ ..+.+|.+|
T Consensus 198 ~-~~-~-~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~~~~l~~~~~~~p~v~~vGpl~~~~~~~-~~~~~~~~~~~~~~w 273 (475)
T PLN02167 198 F-MK-E-SYEAWVEIAERFPEAKGILVNSFTELEPNAFDYFSRLPENYPPVYPVGPILSLKDRT-SPNLDSSDRDRIMRW 273 (475)
T ss_pred h-Cc-c-hHHHHHHHHHhhcccCEeeeccHHHHHHHHHHHHHhhcccCCeeEEecccccccccc-CCCCCcchhHHHHHH
Confidence 2 11 1 123333445567789999999999999999999976421 4699999998743210 0111 122469999
Q ss_pred hhccCCCceEEEeeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCcCCCCcccCCChhhhhhcCCCCceeecCChHhh
Q 018483 163 LNKQAPKSVIYVSFGSIASIDEKELLETAWGLANCEQPFLWVVRPGLVRGSNCLELLPINFQDSVGERGCIVEWAPQKEV 242 (355)
Q Consensus 163 l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~pq~~~ 242 (355)
||.++.+++|||||||+...+.+++.+++.+|+.++++|||+++.......+....+|++|.+++.+++++++|+||.+|
T Consensus 274 ld~~~~~svvyvsfGS~~~~~~~~~~ela~~l~~~~~~flw~~~~~~~~~~~~~~~lp~~~~er~~~rg~v~~w~PQ~~i 353 (475)
T PLN02167 274 LDDQPESSVVFLCFGSLGSLPAPQIKEIAQALELVGCRFLWSIRTNPAEYASPYEPLPEGFMDRVMGRGLVCGWAPQVEI 353 (475)
T ss_pred HhcCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCcEEEEEecCcccccchhhhCChHHHHHhccCeeeeccCCHHHH
Confidence 99988899999999999888999999999999999999999998532111111235899999999999999999999999
Q ss_pred hhcccCCceeeccCchhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEec---------ccCHHHHHHHHHHHhc
Q 018483 243 LANDAVGGFWSHCGWNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELE---------EFEGGTIKKAIKRLMV 313 (355)
Q Consensus 243 L~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~---------~~~~~~l~~ai~~~l~ 313 (355)
|+|+++++|||||||||++||+++|||||+||+++||+.||+++.+.+|+|+.++ .++.++|+++|+++|.
T Consensus 354 L~h~~vg~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~l~~av~~~m~ 433 (475)
T PLN02167 354 LAHKAIGGFVSHCGWNSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRLDYVSAYGEIVKADEIAGAVRSLMD 433 (475)
T ss_pred hcCcccCeEEeeCCcccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeecccccccCCcccHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999987444489999884 3689999999999997
Q ss_pred CchhHHHHHHHHHHHHHHhhhhhcCCChHHHHHHHHHHHHc
Q 018483 314 DTEGKEMRKKAIHLKEKVELPLKEGGSCYNSLNDLVKKILS 354 (355)
Q Consensus 314 ~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~l~~ 354 (355)
++ +.||+||+++++++++|+.+||||+.++++||+.++.
T Consensus 434 ~~--~~~r~~a~~~~~~~~~av~~gGsS~~~l~~~v~~i~~ 472 (475)
T PLN02167 434 GE--DVPRKKVKEIAEAARKAVMDGGSSFVAVKRFIDDLLG 472 (475)
T ss_pred CC--HHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHh
Confidence 63 5899999999999999999999999999999999863
No 15
>PLN02554 UDP-glycosyltransferase family protein
Probab=100.00 E-value=7.5e-58 Score=442.01 Aligned_cols=337 Identities=29% Similarity=0.458 Sum_probs=268.2
Q ss_pred CccEEEeCCccchHHHHHHHcCCCeEEEecchHHHHHHHhhchhhhhcCcccc---ccccccccCCCcc-cchhHHhhhh
Q 018483 10 RISCIVYDSTMCFSQSVADHLKLPGICVRTSPAATMLAFAVFPRLHEQGYISF---LESMSLDRVSDLL-SLMLKELAAS 85 (355)
Q Consensus 10 ~~D~vI~D~~~~~~~~iA~~lgiP~i~~~~~~~~~~~~~~~~~~~~~~~~~p~---~~~~~~~~v~~~~-~~~~~~l~~~ 85 (355)
+++|||+|.++.|+.++|+++|||++.|++++++.+..+++.+........+. .+......+|+++ .++..+++..
T Consensus 112 pv~cvV~D~f~~wa~dvA~~lgIP~~~F~t~sa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~iPgl~~pl~~~dlp~~ 191 (481)
T PLN02554 112 RLAGFVVDMFCTSMIDVANEFGVPSYMFYTSNATFLGLQLHVQMLYDEKKYDVSELEDSEVELDVPSLTRPYPVKCLPSV 191 (481)
T ss_pred CeEEEEECCcchhHHHHHHHhCCCEEEEeCCcHHHHHHHHhhhhhccccccCccccCCCCceeECCCCCCCCCHHHCCCc
Confidence 45999999999999999999999999999999999888877543221110111 1111112478873 6777787753
Q ss_pred hhccCCchHHHHHHHHHhhhccCcEEEEcCccccchHHHHHHHHh--hCCCceecCcccc-cCCCcCCCCCcccchhhHh
Q 018483 86 MKKITTDGMLELRAAVADSVKKCSALIVNTVDFLEQEALTKVQEL--FSASAFTIGPFHK-LVPTISGSLLKEDTNCISW 162 (355)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~nt~~~le~~~~~~~r~~--~~~~v~~vGpl~~-~~~~~~~~~~~~~~~~~~~ 162 (355)
.. . ......+.+......+++.+++||+.+||..++..++.. ..+++++|||++. ..+.. ....+.+.+|.+|
T Consensus 192 ~~--~-~~~~~~~~~~~~~~~~~~gvlvNt~~eLe~~~~~~l~~~~~~~~~v~~vGpl~~~~~~~~-~~~~~~~~~~~~w 267 (481)
T PLN02554 192 LL--S-KEWLPLFLAQARRFREMKGILVNTVAELEPQALKFFSGSSGDLPPVYPVGPVLHLENSGD-DSKDEKQSEILRW 267 (481)
T ss_pred cc--C-HHHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHHhcccCCCCEEEeCCCcccccccc-ccccccchHHHHH
Confidence 31 1 123344445556677899999999999999999988863 2256999999943 32210 0011222459999
Q ss_pred hhccCCCceEEEeeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCcC------C--CCcccCCChhhhhhcCCCCcee
Q 018483 163 LNKQAPKSVIYVSFGSIASIDEKELLETAWGLANCEQPFLWVVRPGLVR------G--SNCLELLPINFQDSVGERGCIV 234 (355)
Q Consensus 163 l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~------~--~~~~~~lp~~~~~~~~~~~~~~ 234 (355)
||++++++||||||||+..++.+++++++.+|++++++|||+++..... + .+....+|++|.++.++|++++
T Consensus 268 Ld~~~~~svvyvsfGS~~~~~~~~~~~la~~l~~~~~~flW~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~r~~~~g~v~ 347 (481)
T PLN02554 268 LDEQPPKSVVFLCFGSMGGFSEEQAREIAIALERSGHRFLWSLRRASPNIMKEPPGEFTNLEEILPEGFLDRTKDIGKVI 347 (481)
T ss_pred HhcCCCCcEEEEeccccccCCHHHHHHHHHHHHHcCCCeEEEEcCCcccccccccccccchhhhCChHHHHHhccCceEE
Confidence 9998889999999999988899999999999999999999999853210 0 0001236899999999999999
Q ss_pred ecCChHhhhhcccCCceeeccCchhHHHHhhcCCcEEeccccCchhhhHHH-HhhhhcceeEec-------------ccC
Q 018483 235 EWAPQKEVLANDAVGGFWSHCGWNSTLESICEGVPMLCKPFFGDQNLNMRY-VCDVWNVGLELE-------------EFE 300 (355)
Q Consensus 235 ~~~pq~~~L~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~-~~~~~g~g~~l~-------------~~~ 300 (355)
+|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||++ +++ +|+|+.+. .++
T Consensus 348 ~W~PQ~~iL~H~~v~~FvtH~G~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~-~g~Gv~l~~~~~~~~~~~~~~~~~ 426 (481)
T PLN02554 348 GWAPQVAVLAKPAIGGFVTHCGWNSILESLWFGVPMAAWPLYAEQKFNAFEMVEE-LGLAVEIRKYWRGDLLAGEMETVT 426 (481)
T ss_pred eeCCHHHHhCCcccCcccccCccchHHHHHHcCCCEEecCccccchhhHHHHHHH-hCceEEeeccccccccccccCeEc
Confidence 999999999999999999999999999999999999999999999999955 555 89999983 479
Q ss_pred HHHHHHHHHHHhc-CchhHHHHHHHHHHHHHHhhhhhcCCChHHHHHHHHHHHHc
Q 018483 301 GGTIKKAIKRLMV-DTEGKEMRKKAIHLKEKVELPLKEGGSCYNSLNDLVKKILS 354 (355)
Q Consensus 301 ~~~l~~ai~~~l~-~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~l~~ 354 (355)
.++|+++|+++|+ + ++||+||+++++++++|+.+||||++++++|++++++
T Consensus 427 ~e~l~~av~~vm~~~---~~~r~~a~~l~~~~~~av~~gGss~~~l~~lv~~~~~ 478 (481)
T PLN02554 427 AEEIERGIRCLMEQD---SDVRKRVKEMSEKCHVALMDGGSSHTALKKFIQDVTK 478 (481)
T ss_pred HHHHHHHHHHHhcCC---HHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHh
Confidence 9999999999997 5 7999999999999999999999999999999999874
No 16
>PLN03007 UDP-glucosyltransferase family protein
Probab=100.00 E-value=7.7e-58 Score=442.42 Aligned_cols=342 Identities=29% Similarity=0.481 Sum_probs=268.1
Q ss_pred CCCccEEEeCCccchHHHHHHHcCCCeEEEecchHHHHHHHhhchhhhhcCccccccccccccCCCcc---cchhHHhhh
Q 018483 8 HDRISCIVYDSTMCFSQSVADHLKLPGICVRTSPAATMLAFAVFPRLHEQGYISFLESMSLDRVSDLL---SLMLKELAA 84 (355)
Q Consensus 8 ~~~~D~vI~D~~~~~~~~iA~~lgiP~i~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~v~~~~---~~~~~~l~~ 84 (355)
..+|||||+|.++.|+..+|+++|||+++|++++++....++......+....+.... ...+|+++ .++..+++.
T Consensus 120 ~~~~~~IV~D~~~~w~~~vA~~lgIP~v~f~~~~a~~~~~~~~~~~~~~~~~~~~~~~--~~~~pg~p~~~~~~~~~~~~ 197 (482)
T PLN03007 120 TTRPDCLVADMFFPWATEAAEKFGVPRLVFHGTGYFSLCASYCIRVHKPQKKVASSSE--PFVIPDLPGDIVITEEQIND 197 (482)
T ss_pred cCCCCEEEECCcchhHHHHHHHhCCCeEEeecccHHHHHHHHHHHhcccccccCCCCc--eeeCCCCCCccccCHHhcCC
Confidence 3479999999999999999999999999999999887776654332111111110000 12256665 233444442
Q ss_pred hhhccCCchHHHHHHHHHhhhccCcEEEEcCccccchHHHHHHHHhhCCCceecCcccccCCCc-----CCCCC-cccch
Q 018483 85 SMKKITTDGMLELRAAVADSVKKCSALIVNTVDFLEQEALTKVQELFSASAFTIGPFHKLVPTI-----SGSLL-KEDTN 158 (355)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nt~~~le~~~~~~~r~~~~~~v~~vGpl~~~~~~~-----~~~~~-~~~~~ 158 (355)
. .....+..+.....+...+++.+++||+++||+++++.+++..+.++++|||+....... +.... ..+.+
T Consensus 198 ~---~~~~~~~~~~~~~~~~~~~~~~vl~Nt~~~le~~~~~~~~~~~~~~~~~VGPl~~~~~~~~~~~~~~~~~~~~~~~ 274 (482)
T PLN03007 198 A---DEESPMGKFMKEVRESEVKSFGVLVNSFYELESAYADFYKSFVAKRAWHIGPLSLYNRGFEEKAERGKKANIDEQE 274 (482)
T ss_pred C---CCchhHHHHHHHHHhhcccCCEEEEECHHHHHHHHHHHHHhccCCCEEEEccccccccccccccccCCccccchhH
Confidence 1 122334555556666778899999999999999999999876556799999986532210 01111 12345
Q ss_pred hhHhhhccCCCceEEEeeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCcCCCCcccCCChhhhhhcCCCCce-eecC
Q 018483 159 CISWLNKQAPKSVIYVSFGSIASIDEKELLETAWGLANCEQPFLWVVRPGLVRGSNCLELLPINFQDSVGERGCI-VEWA 237 (355)
Q Consensus 159 ~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~-~~~~ 237 (355)
|.+|||+++++++|||||||....+.+++.+++.+|+.++++|||+++...... +....+|+++.+++.+++.+ .+|+
T Consensus 275 ~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~~~~l~~~~~~flw~~~~~~~~~-~~~~~lp~~~~~r~~~~g~~v~~w~ 353 (482)
T PLN03007 275 CLKWLDSKKPDSVIYLSFGSVASFKNEQLFEIAAGLEGSGQNFIWVVRKNENQG-EKEEWLPEGFEERTKGKGLIIRGWA 353 (482)
T ss_pred HHHHHhcCCCCceEEEeecCCcCCCHHHHHHHHHHHHHCCCCEEEEEecCCccc-chhhcCCHHHHHHhccCCEEEecCC
Confidence 999999988899999999999888899999999999999999999998642111 11235899998888766655 5999
Q ss_pred ChHhhhhcccCCceeeccCchhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEe--------c--ccCHHHHHHH
Q 018483 238 PQKEVLANDAVGGFWSHCGWNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLEL--------E--EFEGGTIKKA 307 (355)
Q Consensus 238 pq~~~L~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l--------~--~~~~~~l~~a 307 (355)
||.+||+|+++++|||||||||++||+++|||+|++|+++||+.||+++++.+++|+.+ + .++.++|+++
T Consensus 354 PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~l~~a 433 (482)
T PLN03007 354 PQVLILDHQATGGFVTHCGWNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSVGAKKLVKVKGDFISREKVEKA 433 (482)
T ss_pred CHHHHhccCccceeeecCcchHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEeccccccccccCcccHHHHHHH
Confidence 99999999999999999999999999999999999999999999999887645666554 3 5799999999
Q ss_pred HHHHhcCchhHHHHHHHHHHHHHHhhhhhcCCChHHHHHHHHHHHHcC
Q 018483 308 IKRLMVDTEGKEMRKKAIHLKEKVELPLKEGGSCYNSLNDLVKKILSF 355 (355)
Q Consensus 308 i~~~l~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~l~~~ 355 (355)
|+++|.+++|++||+||+++++.+++|+.+||||++++++|++.++++
T Consensus 434 v~~~m~~~~~~~~r~~a~~~~~~a~~a~~~gGsS~~~l~~~v~~~~~~ 481 (482)
T PLN03007 434 VREVIVGEEAEERRLRAKKLAEMAKAAVEEGGSSFNDLNKFMEELNSR 481 (482)
T ss_pred HHHHhcCcHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhc
Confidence 999999877889999999999999999999999999999999999864
No 17
>PLN02670 transferase, transferring glycosyl groups
Probab=100.00 E-value=2.1e-57 Score=433.69 Aligned_cols=339 Identities=27% Similarity=0.432 Sum_probs=264.7
Q ss_pred CccEEEeCCccchHHHHHHHcCCCeEEEecchHHHHHHHhhchhhhhcCccccccccccccCCCc-c-----cchhHHhh
Q 018483 10 RISCIVYDSTMCFSQSVADHLKLPGICVRTSPAATMLAFAVFPRLHEQGYISFLESMSLDRVSDL-L-----SLMLKELA 83 (355)
Q Consensus 10 ~~D~vI~D~~~~~~~~iA~~lgiP~i~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~v~~~-~-----~~~~~~l~ 83 (355)
+++|||+|.++.|+..+|+++|||++.|+++++..+..+++..........+...... ..+|+. | .++..+++
T Consensus 110 ~~~cvI~D~f~~wa~~vA~~~gIP~~~f~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~P~~~~~~~~~~dlp 188 (472)
T PLN02670 110 KPDWIIYDYASHWLPSIAAELGISKAFFSLFTAATLSFIGPPSSLMEGGDLRSTAEDF-TVVPPWVPFESNIVFRYHEVT 188 (472)
T ss_pred CCcEEEECCcchhHHHHHHHcCCCEEEEehhhHHHHHHHhhhHhhhhcccCCCccccc-cCCCCcCCCCccccccHHHhh
Confidence 6899999999999999999999999999999998877765332111111111111111 113332 1 24556777
Q ss_pred hhhhc-cCCchHHHHHHHHHhhhccCcEEEEcCccccchHHHHHHHHhhCCCceecCcccccC-CCcCCCCC--cccchh
Q 018483 84 ASMKK-ITTDGMLELRAAVADSVKKCSALIVNTVDFLEQEALTKVQELFSASAFTIGPFHKLV-PTISGSLL--KEDTNC 159 (355)
Q Consensus 84 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~nt~~~le~~~~~~~r~~~~~~v~~vGpl~~~~-~~~~~~~~--~~~~~~ 159 (355)
..... .........+.+......+++.+++|||.+||+.+++.++..+++|+++|||+.... ........ ..+.+|
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gvlvNTf~eLE~~~l~~l~~~~~~~v~~VGPl~~~~~~~~~~~~~~~~~~~~~ 268 (472)
T PLN02670 189 KYVEKTEEDETGPSDSVRFGFAIGGSDVVIIRSSPEFEPEWFDLLSDLYRKPIIPIGFLPPVIEDDEEDDTIDVKGWVRI 268 (472)
T ss_pred HHHhccCccchHHHHHHHHHhhcccCCEEEEeCHHHHhHHHHHHHHHhhCCCeEEEecCCccccccccccccccchhHHH
Confidence 54410 111122222334444566789999999999999999999886667899999997631 11000000 112459
Q ss_pred hHhhhccCCCceEEEeeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCcCCCCcccCCChhhhhhcCCCCcee-ecCC
Q 018483 160 ISWLNKQAPKSVIYVSFGSIASIDEKELLETAWGLANCEQPFLWVVRPGLVRGSNCLELLPINFQDSVGERGCIV-EWAP 238 (355)
Q Consensus 160 ~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~-~~~p 238 (355)
.+|||++++++||||||||...++.+++.+++.+|+.++++|||+++.......+....+|++|.++++++++++ +|+|
T Consensus 269 ~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gl~~s~~~FlWv~r~~~~~~~~~~~~lp~~f~~~~~~rG~vv~~W~P 348 (472)
T PLN02670 269 KEWLDKQRVNSVVYVALGTEASLRREEVTELALGLEKSETPFFWVLRNEPGTTQNALEMLPDGFEERVKGRGMIHVGWVP 348 (472)
T ss_pred HHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHHCCCCEEEEEcCCcccccchhhcCChHHHHhccCCCeEEeCcCC
Confidence 999999888999999999999999999999999999999999999986321111112358999999999999885 9999
Q ss_pred hHhhhhcccCCceeeccCchhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEec--c----cCHHHHHHHHHHHh
Q 018483 239 QKEVLANDAVGGFWSHCGWNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELE--E----FEGGTIKKAIKRLM 312 (355)
Q Consensus 239 q~~~L~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~--~----~~~~~l~~ai~~~l 312 (355)
|.+||+|+++++|||||||||++||+++|||||++|+++||+.||+++++ +|+|+.++ + ++.++|+++|+++|
T Consensus 349 Q~~IL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~-~g~Gv~l~~~~~~~~~~~e~i~~av~~vm 427 (472)
T PLN02670 349 QVKILSHESVGGFLTHCGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLHG-KKLGLEVPRDERDGSFTSDSVAESVRLAM 427 (472)
T ss_pred HHHHhcCcccceeeecCCcchHHHHHHcCCCEEeCcchhccHHHHHHHHH-cCeeEEeeccccCCcCcHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999987 89999996 2 89999999999999
Q ss_pred cCchhHHHHHHHHHHHHHHhhhhhcCCChHHHHHHHHHHHHc
Q 018483 313 VDTEGKEMRKKAIHLKEKVELPLKEGGSCYNSLNDLVKKILS 354 (355)
Q Consensus 313 ~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~l~~ 354 (355)
.+++|++||+||+++++.++ ..+...+++++|++.|++
T Consensus 428 ~~~~g~~~r~~a~~l~~~~~----~~~~~~~~~~~~~~~l~~ 465 (472)
T PLN02670 428 VDDAGEEIRDKAKEMRNLFG----DMDRNNRYVDELVHYLRE 465 (472)
T ss_pred cCcchHHHHHHHHHHHHHHh----CcchhHHHHHHHHHHHHH
Confidence 88778899999999999999 478899999999999875
No 18
>PLN02764 glycosyltransferase family protein
Probab=100.00 E-value=5.8e-57 Score=427.53 Aligned_cols=323 Identities=22% Similarity=0.350 Sum_probs=261.5
Q ss_pred CccEEEeCCccchHHHHHHHcCCCeEEEecchHHHHHHHhhchhhhhcCccccccccccccCCCcc----cchhHHhhhh
Q 018483 10 RISCIVYDSTMCFSQSVADHLKLPGICVRTSPAATMLAFAVFPRLHEQGYISFLESMSLDRVSDLL----SLMLKELAAS 85 (355)
Q Consensus 10 ~~D~vI~D~~~~~~~~iA~~lgiP~i~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~v~~~~----~~~~~~l~~~ 85 (355)
++||||+|. +.|+.++|+++|||++.|++++++.+..+.. + ....+ ..+|+++ .++..+++..
T Consensus 108 ~~~~iV~D~-~~w~~~vA~~~gIP~~~f~~~~a~~~~~~~~-~----~~~~~-------~~~pglp~~~v~l~~~~l~~~ 174 (453)
T PLN02764 108 EPDLIFFDF-AHWIPEVARDFGLKTVKYVVVSASTIASMLV-P----GGELG-------VPPPGYPSSKVLLRKQDAYTM 174 (453)
T ss_pred CCCEEEECC-chhHHHHHHHhCCCEEEEEcHHHHHHHHHhc-c----cccCC-------CCCCCCCCCcccCcHhhCcch
Confidence 689999995 8999999999999999999999987777642 1 11110 1235554 2455555532
Q ss_pred hhc---cCCchHHHHHHHHHhhhccCcEEEEcCccccchHHHHHHHHhhCCCceecCcccccCCCcCCCCCcccchhhHh
Q 018483 86 MKK---ITTDGMLELRAAVADSVKKCSALIVNTVDFLEQEALTKVQELFSASAFTIGPFHKLVPTISGSLLKEDTNCISW 162 (355)
Q Consensus 86 ~~~---~~~~~~~~~~~~~~~~~~~~~~~l~nt~~~le~~~~~~~r~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~ 162 (355)
... ...+....+..+......+++.+++|||.+||++++++++...+++++.|||++..... ....+.+|.+|
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~vlvNTf~eLE~~~~~~~~~~~~~~v~~VGPL~~~~~~----~~~~~~~cl~W 250 (453)
T PLN02764 175 KNLEPTNTIDVGPNLLERVTTSLMNSDVIAIRTAREIEGNFCDYIEKHCRKKVLLTGPVFPEPDK----TRELEERWVKW 250 (453)
T ss_pred hhcCCCccchhHHHHHHHHHHhhccCCEEEEeccHHhhHHHHHHHHhhcCCcEEEeccCccCccc----cccchhHHHHH
Confidence 100 11122334445454566788999999999999999999988545679999999764311 01113459999
Q ss_pred hhccCCCceEEEeeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCcCCCCcccCCChhhhhhcCCCCcee-ecCChHh
Q 018483 163 LNKQAPKSVIYVSFGSIASIDEKELLETAWGLANCEQPFLWVVRPGLVRGSNCLELLPINFQDSVGERGCIV-EWAPQKE 241 (355)
Q Consensus 163 l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~-~~~pq~~ 241 (355)
||.|++++||||||||...++.+++.+++.+|+.++.+|+|+++...... +....+|++|.++++++++++ +|+||.+
T Consensus 251 LD~q~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~pflwv~r~~~~~~-~~~~~lp~~f~~r~~grG~v~~~W~PQ~~ 329 (453)
T PLN02764 251 LSGYEPDSVVFCALGSQVILEKDQFQELCLGMELTGSPFLVAVKPPRGSS-TIQEALPEGFEERVKGRGVVWGGWVQQPL 329 (453)
T ss_pred HhCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCeEEEEeCCCCCc-chhhhCCcchHhhhccCCcEEeCCCCHHH
Confidence 99999999999999999999999999999999999999999998532111 112459999999999999877 9999999
Q ss_pred hhhcccCCceeeccCchhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEec-----ccCHHHHHHHHHHHhcCc-
Q 018483 242 VLANDAVGGFWSHCGWNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELE-----EFEGGTIKKAIKRLMVDT- 315 (355)
Q Consensus 242 ~L~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~-----~~~~~~l~~ai~~~l~~~- 315 (355)
||+|+++++|||||||||++||+++|||+|++|+++||+.||+++++.+|+|+.+. .++.++|+++|+++|+++
T Consensus 330 vL~h~~v~~FvtH~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~~~~~~~e~i~~av~~vm~~~~ 409 (453)
T PLN02764 330 ILSHPSVGCFVSHCGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREETGWFSKESLRDAINSVMKRDS 409 (453)
T ss_pred HhcCcccCeEEecCCchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEeccccCCccCHHHHHHHHHHHhcCCc
Confidence 99999999999999999999999999999999999999999999976689999984 389999999999999874
Q ss_pred -hhHHHHHHHHHHHHHHhhhhhcCCChHHHHHHHHHHHHc
Q 018483 316 -EGKEMRKKAIHLKEKVELPLKEGGSCYNSLNDLVKKILS 354 (355)
Q Consensus 316 -~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~l~~ 354 (355)
+|+++|++|++++++++ ++|||+.++++|++++++
T Consensus 410 ~~g~~~r~~a~~~~~~~~----~~GSS~~~l~~lv~~~~~ 445 (453)
T PLN02764 410 EIGNLVKKNHTKWRETLA----SPGLLTGYVDNFIESLQD 445 (453)
T ss_pred hhHHHHHHHHHHHHHHHH----hcCCHHHHHHHHHHHHHH
Confidence 48899999999999997 689999999999999875
No 19
>PLN02208 glycosyltransferase family protein
Probab=100.00 E-value=4.3e-57 Score=430.24 Aligned_cols=322 Identities=23% Similarity=0.361 Sum_probs=257.7
Q ss_pred CCccEEEeCCccchHHHHHHHcCCCeEEEecchHHHHHHHhhchhhhhcCccccccccccccCCCccc----chhHHhhh
Q 018483 9 DRISCIVYDSTMCFSQSVADHLKLPGICVRTSPAATMLAFAVFPRLHEQGYISFLESMSLDRVSDLLS----LMLKELAA 84 (355)
Q Consensus 9 ~~~D~vI~D~~~~~~~~iA~~lgiP~i~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~v~~~~~----~~~~~l~~ 84 (355)
.++||||+| ++.|+..+|+.+|||++.|++++++.+. +.+.+. ... . ..+|+++. ++..+++.
T Consensus 106 ~~~~cVV~D-~~~wa~~vA~e~giP~~~f~~~~a~~~~-~~~~~~----~~~-----~--~~~pglp~~~~~~~~~~~~~ 172 (442)
T PLN02208 106 LRPDLIFFD-FAQWIPEMAKEHMIKSVSYIIVSATTIA-HTHVPG----GKL-----G--VPPPGYPSSKVLFRENDAHA 172 (442)
T ss_pred CCCeEEEEC-CcHhHHHHHHHhCCCEEEEEhhhHHHHH-HHccCc----ccc-----C--CCCCCCCCcccccCHHHcCc
Confidence 378999999 5899999999999999999999998654 433221 000 0 12355553 45556653
Q ss_pred hhhccCCch-HHHHHHHHHhhhccCcEEEEcCccccchHHHHHHHHhhCCCceecCcccccCCCcCCCCCcccchhhHhh
Q 018483 85 SMKKITTDG-MLELRAAVADSVKKCSALIVNTVDFLEQEALTKVQELFSASAFTIGPFHKLVPTISGSLLKEDTNCISWL 163 (355)
Q Consensus 85 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~nt~~~le~~~~~~~r~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~l 163 (355)
.. .... +..+..+......+++.+++||+.+||+.+++++++.+++++++|||++..... ...+ +.+|.+||
T Consensus 173 ~~---~~~~~~~~~~~~~~~~~~~~~~vl~Ntf~eLE~~~~~~~~~~~~~~v~~vGpl~~~~~~--~~~~--~~~~~~wL 245 (442)
T PLN02208 173 LA---TLSIFYKRLYHQITTGLKSCDVIALRTCKEIEGKFCDYISRQYHKKVLLTGPMFPEPDT--SKPL--EEQWSHFL 245 (442)
T ss_pred cc---ccchHHHHHHHHHHhhhccCCEEEEECHHHHHHHHHHHHHhhcCCCEEEEeecccCcCC--CCCC--HHHHHHHH
Confidence 21 1122 222333333456689999999999999999999988666679999999875331 0122 34599999
Q ss_pred hccCCCceEEEeeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCcCCCCcccCCChhhhhhcCCCCcee-ecCChHhh
Q 018483 164 NKQAPKSVIYVSFGSIASIDEKELLETAWGLANCEQPFLWVVRPGLVRGSNCLELLPINFQDSVGERGCIV-EWAPQKEV 242 (355)
Q Consensus 164 ~~~~~~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~-~~~pq~~~ 242 (355)
|.+++++||||||||...++.+++.+++.+++.++.+++|+++.+.... .....+|++|.+++.++++++ +|+||.+|
T Consensus 246 d~~~~~sVvyvSfGS~~~l~~~q~~e~~~~l~~s~~pf~wv~r~~~~~~-~~~~~lp~~f~~r~~~~g~~v~~W~PQ~~i 324 (442)
T PLN02208 246 SGFPPKSVVFCSLGSQIILEKDQFQELCLGMELTGLPFLIAVKPPRGSS-TVQEGLPEGFEERVKGRGVVWGGWVQQPLI 324 (442)
T ss_pred hcCCCCcEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEEeCCCccc-chhhhCCHHHHHHHhcCCcEeeccCCHHHH
Confidence 9988899999999999998999999999999888999999998531111 112458999999988777766 99999999
Q ss_pred hhcccCCceeeccCchhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEec--c---cCHHHHHHHHHHHhcCc-h
Q 018483 243 LANDAVGGFWSHCGWNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELE--E---FEGGTIKKAIKRLMVDT-E 316 (355)
Q Consensus 243 L~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~--~---~~~~~l~~ai~~~l~~~-~ 316 (355)
|+|+++++|||||||||++||+++|||||++|+++||+.||+++++.+|+|+.++ + ++.++|+++|+++|+++ +
T Consensus 325 L~H~~v~~FvtHcG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~~~~~~~~~l~~ai~~~m~~~~e 404 (442)
T PLN02208 325 LDHPSIGCFVNHCGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREKTGWFSKESLSNAIKSVMDKDSD 404 (442)
T ss_pred hcCCccCeEEccCCchHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEeccccCCcCcHHHHHHHHHHHhcCCch
Confidence 9999999999999999999999999999999999999999998776689999996 3 89999999999999875 3
Q ss_pred -hHHHHHHHHHHHHHHhhhhhcCCChHHHHHHHHHHHHcC
Q 018483 317 -GKEMRKKAIHLKEKVELPLKEGGSCYNSLNDLVKKILSF 355 (355)
Q Consensus 317 -~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~l~~~ 355 (355)
|+++|++|+++++.+. ++|||+.++++|++.++++
T Consensus 405 ~g~~~r~~~~~~~~~~~----~~gsS~~~l~~~v~~l~~~ 440 (442)
T PLN02208 405 LGKLVRSNHTKLKEILV----SPGLLTGYVDKFVEELQEY 440 (442)
T ss_pred hHHHHHHHHHHHHHHHh----cCCcHHHHHHHHHHHHHHh
Confidence 8999999999999985 5789999999999999763
No 20
>PLN02448 UDP-glycosyltransferase family protein
Probab=100.00 E-value=2.9e-56 Score=429.34 Aligned_cols=334 Identities=30% Similarity=0.509 Sum_probs=266.8
Q ss_pred CCccEEEeCCccchHHHHHHHcCCCeEEEecchHHHHHHHhhchhhhhcCcccccc----ccccccCCCcccchhHHhhh
Q 018483 9 DRISCIVYDSTMCFSQSVADHLKLPGICVRTSPAATMLAFAVFPRLHEQGYISFLE----SMSLDRVSDLLSLMLKELAA 84 (355)
Q Consensus 9 ~~~D~vI~D~~~~~~~~iA~~lgiP~i~~~~~~~~~~~~~~~~~~~~~~~~~p~~~----~~~~~~v~~~~~~~~~~l~~ 84 (355)
.++||||+|.++.|+..+|+++|||++.|+++++..+..+.+++........|... ......+|+++.++..+++.
T Consensus 107 ~~~~~VI~D~~~~wa~~vA~~lgIP~v~f~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iPg~~~l~~~dlp~ 186 (459)
T PLN02448 107 PPVTAIVADTYLFWAVGVGNRRNIPVASLWTMSATFFSVFYHFDLLPQNGHFPVELSESGEERVDYIPGLSSTRLSDLPP 186 (459)
T ss_pred CCcEEEEECCccHHHHHHHHHhCCCeEEEEhHHHHHHHHHHHhhhhhhccCCCCccccccCCccccCCCCCCCChHHCch
Confidence 36899999999999999999999999999999998777766554322111112211 11112367777778888876
Q ss_pred hhhccCCchHHHHHHHHHhhhccCcEEEEcCccccchHHHHHHHHhhCCCceecCcccccCCC--cCCC-CC-cccchhh
Q 018483 85 SMKKITTDGMLELRAAVADSVKKCSALIVNTVDFLEQEALTKVQELFSASAFTIGPFHKLVPT--ISGS-LL-KEDTNCI 160 (355)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nt~~~le~~~~~~~r~~~~~~v~~vGpl~~~~~~--~~~~-~~-~~~~~~~ 160 (355)
... .......+.+........+++.+++||+++||+.+++.+++.++.+++.|||+...... .... .. +.+.+|.
T Consensus 187 ~~~-~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~~~~~~~~~iGP~~~~~~~~~~~~~~~~~~~~~~~~ 265 (459)
T PLN02448 187 IFH-GNSRRVLKRILEAFSWVPKAQYLLFTSFYELEAQAIDALKSKFPFPVYPIGPSIPYMELKDNSSSSNNEDNEPDYF 265 (459)
T ss_pred hhc-CCchHHHHHHHHHHhhcccCCEEEEccHHHhhHHHHHHHHhhcCCceEEecCcccccccCCCccccccccchhHHH
Confidence 442 22223334444555566778899999999999999999988766689999999763211 0000 01 1223589
Q ss_pred HhhhccCCCceEEEeeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCcCCCCcccCCChhhhhhcCCCCceeecCChH
Q 018483 161 SWLNKQAPKSVIYVSFGSIASIDEKELLETAWGLANCEQPFLWVVRPGLVRGSNCLELLPINFQDSVGERGCIVEWAPQK 240 (355)
Q Consensus 161 ~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~pq~ 240 (355)
+|++.++++++|||||||....+.+++++++++|+.++++|||+++... .++.++.++|+++.+|+||.
T Consensus 266 ~wl~~~~~~~vvyvsfGs~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~~-----------~~~~~~~~~~~~v~~w~pQ~ 334 (459)
T PLN02448 266 QWLDSQPEGSVLYVSLGSFLSVSSAQMDEIAAGLRDSGVRFLWVARGEA-----------SRLKEICGDMGLVVPWCDQL 334 (459)
T ss_pred HHHcCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCEEEEEcCch-----------hhHhHhccCCEEEeccCCHH
Confidence 9999988899999999999888889999999999999999999886421 23434445677889999999
Q ss_pred hhhhcccCCceeeccCchhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEec-------ccCHHHHHHHHHHHhc
Q 018483 241 EVLANDAVGGFWSHCGWNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELE-------EFEGGTIKKAIKRLMV 313 (355)
Q Consensus 241 ~~L~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~-------~~~~~~l~~ai~~~l~ 313 (355)
+||+|+++++|||||||||++||+++|||||++|+++||+.||+++++.||+|+.+. .++.++|+++|+++|.
T Consensus 335 ~iL~h~~v~~fvtHgG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~l~~av~~vl~ 414 (459)
T PLN02448 335 KVLCHSSVGGFWTHCGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKREVGEETLVGREEIAELVKRFMD 414 (459)
T ss_pred HHhccCccceEEecCchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEecccccCCcCcHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999987678998884 3699999999999998
Q ss_pred Cc--hhHHHHHHHHHHHHHHhhhhhcCCChHHHHHHHHHHHHc
Q 018483 314 DT--EGKEMRKKAIHLKEKVELPLKEGGSCYNSLNDLVKKILS 354 (355)
Q Consensus 314 ~~--~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~l~~ 354 (355)
++ +|++||+||+++++++++|+.+||||++++++|++.+++
T Consensus 415 ~~~~~~~~~r~~a~~~~~~~~~a~~~gGss~~~l~~~v~~~~~ 457 (459)
T PLN02448 415 LESEEGKEMRRRAKELQEICRGAIAKGGSSDTNLDAFIRDISQ 457 (459)
T ss_pred CCchhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhc
Confidence 63 488999999999999999999999999999999999874
No 21
>PLN00414 glycosyltransferase family protein
Probab=100.00 E-value=2.1e-55 Score=419.12 Aligned_cols=321 Identities=22% Similarity=0.333 Sum_probs=253.1
Q ss_pred CCccEEEeCCccchHHHHHHHcCCCeEEEecchHHHHHHHhhchhhhhcCccccccccccccCCCccc----chhHHhh-
Q 018483 9 DRISCIVYDSTMCFSQSVADHLKLPGICVRTSPAATMLAFAVFPRLHEQGYISFLESMSLDRVSDLLS----LMLKELA- 83 (355)
Q Consensus 9 ~~~D~vI~D~~~~~~~~iA~~lgiP~i~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~v~~~~~----~~~~~l~- 83 (355)
.+|||||+|. +.|+..+|+++|||++.|+++++..+..+.+ +. .... ..+|+++. ++..+.+
T Consensus 106 ~~p~cVV~D~-~~wa~~vA~~lgIP~~~F~~~~a~~~~~~~~-~~-~~~~----------~~~pg~p~~~~~~~~~~~~~ 172 (446)
T PLN00414 106 LKPDLIFFDF-VHWVPEMAKEFGIKSVNYQIISAACVAMVLA-PR-AELG----------FPPPDYPLSKVALRGHDANV 172 (446)
T ss_pred CCCeEEEECC-chhHHHHHHHhCCCEEEEecHHHHHHHHHhC-cH-hhcC----------CCCCCCCCCcCcCchhhccc
Confidence 3789999995 8999999999999999999999988777654 11 0000 01233332 2222211
Q ss_pred -hhhhccCCchHHHHHHHHHhhhccCcEEEEcCccccchHHHHHHHHhhCCCceecCcccccCCCcCCCCCcccchhhHh
Q 018483 84 -ASMKKITTDGMLELRAAVADSVKKCSALIVNTVDFLEQEALTKVQELFSASAFTIGPFHKLVPTISGSLLKEDTNCISW 162 (355)
Q Consensus 84 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nt~~~le~~~~~~~r~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~ 162 (355)
... .. ....+.+..+...+++.+++|||.+||+.+++.++..+++|+++|||+...... ......+.+|.+|
T Consensus 173 ~~~~--~~---~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~v~~VGPl~~~~~~--~~~~~~~~~~~~W 245 (446)
T PLN00414 173 CSLF--AN---SHELFGLITKGLKNCDVVSIRTCVELEGNLCDFIERQCQRKVLLTGPMLPEPQN--KSGKPLEDRWNHW 245 (446)
T ss_pred chhh--cc---cHHHHHHHHHhhccCCEEEEechHHHHHHHHHHHHHhcCCCeEEEcccCCCccc--ccCcccHHHHHHH
Confidence 111 11 112333444566779999999999999999999988656679999999754321 0011123459999
Q ss_pred hhccCCCceEEEeeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCcCCCCcccCCChhhhhhcCCCCcee-ecCChHh
Q 018483 163 LNKQAPKSVIYVSFGSIASIDEKELLETAWGLANCEQPFLWVVRPGLVRGSNCLELLPINFQDSVGERGCIV-EWAPQKE 241 (355)
Q Consensus 163 l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~-~~~pq~~ 241 (355)
||.|++++||||||||....+.+++.+++.+|+.++.+|+|+++.....+ +....+|++|.++++++++++ +|+||.+
T Consensus 246 LD~q~~~sVvyvsfGS~~~~~~~q~~e~a~gL~~s~~~Flwvvr~~~~~~-~~~~~lp~~f~~r~~~~g~vv~~w~PQ~~ 324 (446)
T PLN00414 246 LNGFEPGSVVFCAFGTQFFFEKDQFQEFCLGMELTGLPFLIAVMPPKGSS-TVQEALPEGFEERVKGRGIVWEGWVEQPL 324 (446)
T ss_pred HhcCCCCceEEEeecccccCCHHHHHHHHHHHHHcCCCeEEEEecCCCcc-cchhhCChhHHHHhcCCCeEEeccCCHHH
Confidence 99999999999999999999999999999999999999999998632111 112358999999999999987 8999999
Q ss_pred hhhcccCCceeeccCchhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEec-----ccCHHHHHHHHHHHhcCc-
Q 018483 242 VLANDAVGGFWSHCGWNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELE-----EFEGGTIKKAIKRLMVDT- 315 (355)
Q Consensus 242 ~L~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~-----~~~~~~l~~ai~~~l~~~- 315 (355)
||+|+++++|||||||||++||+++|||+|++|+++||+.||+++++++|+|+.++ .++.++|+++++++|.++
T Consensus 325 vL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~i~~~v~~~m~~~~ 404 (446)
T PLN00414 325 ILSHPSVGCFVNHCGFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQREDSGWFSKESLRDTVKSVMDKDS 404 (446)
T ss_pred HhcCCccceEEecCchhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEeccccCCccCHHHHHHHHHHHhcCCh
Confidence 99999999999999999999999999999999999999999999975589999995 289999999999999764
Q ss_pred -hhHHHHHHHHHHHHHHhhhhhcCCChHHHHHHHHHHHHc
Q 018483 316 -EGKEMRKKAIHLKEKVELPLKEGGSCYNSLNDLVKKILS 354 (355)
Q Consensus 316 -~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~l~~ 354 (355)
+|+++|++|+++++.+.+ +||++ ..+++||+.+++
T Consensus 405 e~g~~~r~~a~~~~~~~~~---~gg~s-s~l~~~v~~~~~ 440 (446)
T PLN00414 405 EIGNLVKRNHKKLKETLVS---PGLLS-GYADKFVEALEN 440 (446)
T ss_pred hhHHHHHHHHHHHHHHHHc---CCCcH-HHHHHHHHHHHH
Confidence 388999999999999753 55534 448999999875
No 22
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=100.00 E-value=5.2e-48 Score=374.71 Aligned_cols=297 Identities=19% Similarity=0.240 Sum_probs=231.1
Q ss_pred CCCccEEEeCCccchHHHHHHHc-CCCeEEEecchHHHHHHHhhch-hhhhcCcccccc------ccccccCCCcccchh
Q 018483 8 HDRISCIVYDSTMCFSQSVADHL-KLPGICVRTSPAATMLAFAVFP-RLHEQGYISFLE------SMSLDRVSDLLSLML 79 (355)
Q Consensus 8 ~~~~D~vI~D~~~~~~~~iA~~l-giP~i~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~------~~~~~~v~~~~~~~~ 79 (355)
+++||+||+|.+..|+..+|+++ ++|.|.++++........ ..+ .+.+++|+|... |++++|+.|+.....
T Consensus 134 ~~kFDlvi~e~~~~c~~~la~~~~~~p~i~~ss~~~~~~~~~-~~gg~p~~~syvP~~~~~~~~~Msf~~R~~N~~~~~~ 212 (507)
T PHA03392 134 NNKFDLLVTEAFLDYPLVFSHLFGDAPVIQISSGYGLAENFE-TMGAVSRHPVYYPNLWRSKFGNLNVWETINEIYTELR 212 (507)
T ss_pred CCceeEEEecccchhHHHHHHHhCCCCEEEEcCCCCchhHHH-hhccCCCCCeeeCCcccCCCCCCCHHHHHHHHHHHHH
Confidence 55899999999999999999999 999888877665433222 233 667788888632 677788777542111
Q ss_pred HHhh-hhhhccCCchHHHHH----HHHHhhhccCcEEEEcCccccchHHHHHHHHhhCCCceecCcccccCCCcCCCCCc
Q 018483 80 KELA-ASMKKITTDGMLELR----AAVADSVKKCSALIVNTVDFLEQEALTKVQELFSASAFTIGPFHKLVPTISGSLLK 154 (355)
Q Consensus 80 ~~l~-~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~nt~~~le~~~~~~~r~~~~~~v~~vGpl~~~~~~~~~~~~~ 154 (355)
.... ............+.+ ....+..++++++|+|+++.+|++ |+ +++++++|||++.+... ..+++
T Consensus 213 ~~~~~~~~~~~~~~l~~~~f~~~~~~~~~l~~~~~l~lvns~~~~d~~-----rp-~~p~v~~vGgi~~~~~~--~~~l~ 284 (507)
T PHA03392 213 LYNEFSLLADEQNKLLKQQFGPDTPTIRELRNRVQLLFVNVHPVFDNN-----RP-VPPSVQYLGGLHLHKKP--PQPLD 284 (507)
T ss_pred HHHHHHHhhHHHHHHHHHHcCCCCCCHHHHHhCCcEEEEecCccccCC-----CC-CCCCeeeecccccCCCC--CCCCC
Confidence 1110 000000111122222 124566678899999999999987 55 56669999999885421 12444
Q ss_pred ccchhhHhhhccCCCceEEEeeccccc---cCHHHHHHHHHHHHhCCCCEEEEEcCCCcCCCCcccCCChhhhhhcCCCC
Q 018483 155 EDTNCISWLNKQAPKSVIYVSFGSIAS---IDEKELLETAWGLANCEQPFLWVVRPGLVRGSNCLELLPINFQDSVGERG 231 (355)
Q Consensus 155 ~~~~~~~~l~~~~~~~~v~vs~GS~~~---~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~ 231 (355)
++ +.+|++.. ++++|||||||... .+.+.++.+++++++.+++|||+++..... ..+|+|+
T Consensus 285 ~~--l~~fl~~~-~~g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l~~~viw~~~~~~~~-----~~~p~Nv-------- 348 (507)
T PHA03392 285 DY--LEEFLNNS-TNGVVYVSFGSSIDTNDMDNEFLQMLLRTFKKLPYNVLWKYDGEVEA-----INLPANV-------- 348 (507)
T ss_pred HH--HHHHHhcC-CCcEEEEECCCCCcCCCCCHHHHHHHHHHHHhCCCeEEEEECCCcCc-----ccCCCce--------
Confidence 44 88999974 56899999999864 578899999999999999999999854210 1345554
Q ss_pred ceeecCChHhhhhcccCCceeeccCchhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEec--ccCHHHHHHHHH
Q 018483 232 CIVEWAPQKEVLANDAVGGFWSHCGWNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELE--EFEGGTIKKAIK 309 (355)
Q Consensus 232 ~~~~~~pq~~~L~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~--~~~~~~l~~ai~ 309 (355)
++.+|+||.+||+|+++++||||||+||++||+++|||+|++|+++||+.||+++++ +|+|+.++ +++.++|.++|+
T Consensus 349 ~i~~w~Pq~~lL~hp~v~~fItHGG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~-~G~G~~l~~~~~t~~~l~~ai~ 427 (507)
T PHA03392 349 LTQKWFPQRAVLKHKNVKAFVTQGGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVE-LGIGRALDTVTVSAAQLVLAIV 427 (507)
T ss_pred EEecCCCHHHHhcCCCCCEEEecCCcccHHHHHHcCCCEEECCCCccHHHHHHHHHH-cCcEEEeccCCcCHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999999998 79999998 899999999999
Q ss_pred HHhcCchhHHHHHHHHHHHHHHhh
Q 018483 310 RLMVDTEGKEMRKKAIHLKEKVEL 333 (355)
Q Consensus 310 ~~l~~~~~~~~~~~a~~l~~~~~~ 333 (355)
++++| ++||+||+++++.+++
T Consensus 428 ~vl~~---~~y~~~a~~ls~~~~~ 448 (507)
T PHA03392 428 DVIEN---PKYRKNLKELRHLIRH 448 (507)
T ss_pred HHhCC---HHHHHHHHHHHHHHHh
Confidence 99999 8999999999999996
No 23
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=100.00 E-value=8.1e-50 Score=391.64 Aligned_cols=296 Identities=25% Similarity=0.356 Sum_probs=207.9
Q ss_pred CCccEEEeCCccchHHHHHHHcCCCeEEEecchHHHHHHHhhchhhhhcCcccccc------ccccccCCCcccchhHH-
Q 018483 9 DRISCIVYDSTMCFSQSVADHLKLPGICVRTSPAATMLAFAVFPRLHEQGYISFLE------SMSLDRVSDLLSLMLKE- 81 (355)
Q Consensus 9 ~~~D~vI~D~~~~~~~~iA~~lgiP~i~~~~~~~~~~~~~~~~~~~~~~~~~p~~~------~~~~~~v~~~~~~~~~~- 81 (355)
+++|++|+|.+..|+..+|+.+|+|.+.+.++...........+.+.+++|.|... +++++|+.|+.......
T Consensus 118 ~~fDlvI~d~f~~c~~~la~~l~iP~i~~~s~~~~~~~~~~~~g~p~~psyvP~~~s~~~~~msf~~Ri~N~l~~~~~~~ 197 (500)
T PF00201_consen 118 EKFDLVISDAFDPCGLALAHYLGIPVIIISSSTPMYDLSSFSGGVPSPPSYVPSMFSDFSDRMSFWQRIKNFLFYLYFRF 197 (500)
T ss_dssp HHHCT-EEEEEESSHHHHHHHHHHTHHHHHHCCSCSCCTCCTSCCCTSTTSTTCBCCCSGTTSSSST--TTSHHHHHHHH
T ss_pred hccccceEeeccchhHHHHHHhcCCeEEEecccccchhhhhccCCCCChHHhccccccCCCccchhhhhhhhhhhhhhcc
Confidence 47999999999999999999999999886654432221112124456778887632 66778888864322111
Q ss_pred hhhhhhcc---CCchHHHHHHHHHhhhccCcEEEEcCccccchHHHHHHHHhhCCCceecCcccccCCCcCCCCCcccch
Q 018483 82 LAASMKKI---TTDGMLELRAAVADSVKKCSALIVNTVDFLEQEALTKVQELFSASAFTIGPFHKLVPTISGSLLKEDTN 158 (355)
Q Consensus 82 l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~nt~~~le~~~~~~~r~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~ 158 (355)
+....... ........-....+...+++++++|+++.++.| ||. .+++++||+++...+. +++.+
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~ns~~~ld~p-----rp~-~p~v~~vGgl~~~~~~----~l~~~-- 265 (500)
T PF00201_consen 198 IFRYFFSPQDKLYKKYFGFPFSFRELLSNASLVLINSHPSLDFP-----RPL-LPNVVEVGGLHIKPAK----PLPEE-- 265 (500)
T ss_dssp HHHHGGGS-TTS-EEESS-GGGCHHHHHHHHHCCSSTEEE---------HHH-HCTSTTGCGC-S--------TCHHH--
T ss_pred ccccchhhHHHHHhhhcccccccHHHHHHHHHHhhhccccCcCC-----cch-hhcccccCcccccccc----ccccc--
Confidence 11111100 000111111112344556788999999999877 774 3569999999887653 55554
Q ss_pred hhHhhhccCCCceEEEeeccccc-cCHHHHHHHHHHHHhCCCCEEEEEcCCCcCCCCcccCCChhhhhhcCCCCceeecC
Q 018483 159 CISWLNKQAPKSVIYVSFGSIAS-IDEKELLETAWGLANCEQPFLWVVRPGLVRGSNCLELLPINFQDSVGERGCIVEWA 237 (355)
Q Consensus 159 ~~~~l~~~~~~~~v~vs~GS~~~-~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~ 237 (355)
+.+|++...++++|||||||... ++.+..++++++|++.+++|||++++.. ...+|+|+ ++.+|+
T Consensus 266 ~~~~~~~~~~~~vv~vsfGs~~~~~~~~~~~~~~~~~~~~~~~~iW~~~~~~------~~~l~~n~--------~~~~W~ 331 (500)
T PF00201_consen 266 LWNFLDSSGKKGVVYVSFGSIVSSMPEEKLKEIAEAFENLPQRFIWKYEGEP------PENLPKNV--------LIVKWL 331 (500)
T ss_dssp HHHHTSTTTTTEEEEEE-TSSSTT-HHHHHHHHHHHHHCSTTEEEEEETCSH------GCHHHTTE--------EEESS-
T ss_pred cchhhhccCCCCEEEEecCcccchhHHHHHHHHHHHHhhCCCcccccccccc------cccccceE--------EEeccc
Confidence 88999975678999999999986 5556688999999999999999998632 22344444 899999
Q ss_pred ChHhhhhcccCCceeeccCchhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEec--ccCHHHHHHHHHHHhcCc
Q 018483 238 PQKEVLANDAVGGFWSHCGWNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELE--EFEGGTIKKAIKRLMVDT 315 (355)
Q Consensus 238 pq~~~L~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~--~~~~~~l~~ai~~~l~~~ 315 (355)
||.+||+||++++||||||+||++||+++|||+|++|+++||+.||+++++ .|+|+.++ ++|.+++.++|+++|+|
T Consensus 332 PQ~~lL~hp~v~~fitHgG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~-~G~g~~l~~~~~~~~~l~~ai~~vl~~- 409 (500)
T PF00201_consen 332 PQNDLLAHPRVKLFITHGGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEE-KGVGVVLDKNDLTEEELRAAIREVLEN- 409 (500)
T ss_dssp -HHHHHTSTTEEEEEES--HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHH-TTSEEEEGGGC-SHHHHHHHHHHHHHS-
T ss_pred cchhhhhcccceeeeeccccchhhhhhhccCCccCCCCcccCCccceEEEE-EeeEEEEEecCCcHHHHHHHHHHHHhh-
Confidence 999999999999999999999999999999999999999999999999998 69999999 89999999999999999
Q ss_pred hhHHHHHHHHHHHHHHhhh
Q 018483 316 EGKEMRKKAIHLKEKVELP 334 (355)
Q Consensus 316 ~~~~~~~~a~~l~~~~~~a 334 (355)
++|++||+++++++++.
T Consensus 410 --~~y~~~a~~ls~~~~~~ 426 (500)
T PF00201_consen 410 --PSYKENAKRLSSLFRDR 426 (500)
T ss_dssp --HHHHHHHHHHHHTTT--
T ss_pred --hHHHHHHHHHHHHHhcC
Confidence 89999999999999963
No 24
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=100.00 E-value=5.1e-38 Score=307.96 Aligned_cols=297 Identities=28% Similarity=0.411 Sum_probs=208.9
Q ss_pred CccEEEeCCccchHHHHHHHcC-CCeEEEecchHHHHHHHhhchhhhhcCcccccc-------ccccccCCCcccchhHH
Q 018483 10 RISCIVYDSTMCFSQSVADHLK-LPGICVRTSPAATMLAFAVFPRLHEQGYISFLE-------SMSLDRVSDLLSLMLKE 81 (355)
Q Consensus 10 ~~D~vI~D~~~~~~~~iA~~lg-iP~i~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-------~~~~~~v~~~~~~~~~~ 81 (355)
+||++|+|.+..|...+|...+ ++..++.+.++.......+ .+.++.|... +.+..++.++. ...
T Consensus 114 ~~d~~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~g~~----~~~~~~p~~~~~~~~~~~~~~~~~~n~~---~~~ 186 (496)
T KOG1192|consen 114 KFDLIISDPFLGLFLLLAIPSFVIPLLSFPTSSAVLLALGLP----SPLSYVPSPFSLSSGDDMSFPERVPNLI---KKD 186 (496)
T ss_pred CccEEEechhhHHHHHhcccceEEEeecccCchHHHHhcCCc----CcccccCcccCccccccCcHHHHHHHHH---HHH
Confidence 4999999998888888887775 9999988888765443322 3334555432 22222322221 111
Q ss_pred hhhhhhc-cC----CchHHHHH-------HHHHhhhccCcEEEEcCccccchHHHHHHHHhhCCCceecCcccccCCCcC
Q 018483 82 LAASMKK-IT----TDGMLELR-------AAVADSVKKCSALIVNTVDFLEQEALTKVQELFSASAFTIGPFHKLVPTIS 149 (355)
Q Consensus 82 l~~~~~~-~~----~~~~~~~~-------~~~~~~~~~~~~~l~nt~~~le~~~~~~~r~~~~~~v~~vGpl~~~~~~~~ 149 (355)
++..... .. ........ ....+...+++..++|+...++.. .++ ..+++++|||++.....
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ln~~~~~~~~----~~~-~~~~v~~IG~l~~~~~~-- 259 (496)
T KOG1192|consen 187 LPSFLFSLSDDRKQDKISKELLGDILNWKPTASGIIVNASFIFLNSNPLLDFE----PRP-LLPKVIPIGPLHVKDSK-- 259 (496)
T ss_pred HHHHHHHHhhhHHHHHHHHHhCCCcccccccHHHhhhcCeEEEEccCcccCCC----CCC-CCCCceEECcEEecCcc--
Confidence 1111100 00 00001110 112245566778888887776652 022 23559999999997432
Q ss_pred CCCCcccchhhHhhhccCCC--ceEEEeecccc---ccCHHHHHHHHHHHHhC-CCCEEEEEcCCCcCCCCcccCCChhh
Q 018483 150 GSLLKEDTNCISWLNKQAPK--SVIYVSFGSIA---SIDEKELLETAWGLANC-EQPFLWVVRPGLVRGSNCLELLPINF 223 (355)
Q Consensus 150 ~~~~~~~~~~~~~l~~~~~~--~~v~vs~GS~~---~~~~~~~~~~~~~l~~~-~~~~i~~~~~~~~~~~~~~~~lp~~~ 223 (355)
.... .+.+|++..+.. ++|||||||++ .++.++..+++.+|+++ +++|+|+++.... ..+++++
T Consensus 260 --~~~~--~~~~wl~~~~~~~~~vvyvSfGS~~~~~~lp~~~~~~l~~~l~~~~~~~FiW~~~~~~~------~~~~~~~ 329 (496)
T KOG1192|consen 260 --QKSP--LPLEWLDILDESRHSVVYISFGSMVNSADLPEEQKKELAKALESLQGVTFLWKYRPDDS------IYFPEGL 329 (496)
T ss_pred --cccc--ccHHHHHHHhhccCCeEEEECCcccccccCCHHHHHHHHHHHHhCCCceEEEEecCCcc------hhhhhcC
Confidence 1111 267888876665 99999999998 68999999999999999 8889999987431 1123333
Q ss_pred hhhcCCCCceeecCChHhh-hhcccCCceeeccCchhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEec-ccCH
Q 018483 224 QDSVGERGCIVEWAPQKEV-LANDAVGGFWSHCGWNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELE-EFEG 301 (355)
Q Consensus 224 ~~~~~~~~~~~~~~pq~~~-L~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~-~~~~ 301 (355)
.++.++|+...+|+||.++ |.|+++++|||||||||++|++++|||+|++|+++||+.||++++++.++++... +++.
T Consensus 330 ~~~~~~nV~~~~W~PQ~~lll~H~~v~~FvTHgG~nSt~E~~~~GvP~v~~Plf~DQ~~Na~~i~~~g~~~v~~~~~~~~ 409 (496)
T KOG1192|consen 330 PNRGRGNVVLSKWAPQNDLLLDHPAVGGFVTHGGWNSTLESIYSGVPMVCVPLFGDQPLNARLLVRHGGGGVLDKRDLVS 409 (496)
T ss_pred CCCCcCceEEecCCCcHHHhcCCCcCcEEEECCcccHHHHHHhcCCceecCCccccchhHHHHHHhCCCEEEEehhhcCc
Confidence 2222345566789999998 5999999999999999999999999999999999999999999999645555555 7777
Q ss_pred HHHHHHHHHHhcCchhHHHHHHHHHHHHHHhh
Q 018483 302 GTIKKAIKRLMVDTEGKEMRKKAIHLKEKVEL 333 (355)
Q Consensus 302 ~~l~~ai~~~l~~~~~~~~~~~a~~l~~~~~~ 333 (355)
+.+.+++.+++++ ++|+++|+++++..++
T Consensus 410 ~~~~~~~~~il~~---~~y~~~~~~l~~~~~~ 438 (496)
T KOG1192|consen 410 EELLEAIKEILEN---EEYKEAAKRLSEILRD 438 (496)
T ss_pred HHHHHHHHHHHcC---hHHHHHHHHHHHHHHc
Confidence 6699999999999 8999999999998874
No 25
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=100.00 E-value=6.5e-33 Score=263.94 Aligned_cols=295 Identities=21% Similarity=0.265 Sum_probs=199.4
Q ss_pred CCCCccEEEeCCccchHHHHHHHcCCCeEEEecchHHHHHHHhhchhhhhcCccccccccccccCCCcccchhHHhhhhh
Q 018483 7 PHDRISCIVYDSTMCFSQSVADHLKLPGICVRTSPAATMLAFAVFPRLHEQGYISFLESMSLDRVSDLLSLMLKELAASM 86 (355)
Q Consensus 7 ~~~~~D~vI~D~~~~~~~~iA~~lgiP~i~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~v~~~~~~~~~~l~~~~ 86 (355)
...+||+||+|.+++++..+|+.+|||++.+++.+... ..++... .|... ..+........ ....+....
T Consensus 89 ~~~~pDlVi~d~~~~~~~~~A~~~giP~v~~~~~~~~~----~~~~~~~----~~~~~-~~~~~~~~~~~-~~~~~~~~~ 158 (392)
T TIGR01426 89 KGDRPDLIVYDIASWTGRLLARKWDVPVISSFPTFAAN----EEFEEMV----SPAGE-GSAEEGAIAER-GLAEYVARL 158 (392)
T ss_pred cCCCCCEEEECCccHHHHHHHHHhCCCEEEEehhhccc----ccccccc----cccch-hhhhhhccccc-hhHHHHHHH
Confidence 34489999999998999999999999999886543211 0011000 01100 00000000000 000000000
Q ss_pred hccCCchHHHHHH----HHHh-hhccCcEEEEcCccccchHHHHHHHHhhCCCceecCcccccCCCcCCCCCcccchhhH
Q 018483 87 KKITTDGMLELRA----AVAD-SVKKCSALIVNTVDFLEQEALTKVQELFSASAFTIGPFHKLVPTISGSLLKEDTNCIS 161 (355)
Q Consensus 87 ~~~~~~~~~~~~~----~~~~-~~~~~~~~l~nt~~~le~~~~~~~r~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~ 161 (355)
+.++.... .... .....+..+..+.+.|+++ .+.++.+++++||+...... ...
T Consensus 159 -----~~~r~~~gl~~~~~~~~~~~~~~~~l~~~~~~l~~~-----~~~~~~~~~~~Gp~~~~~~~-----------~~~ 217 (392)
T TIGR01426 159 -----SALLEEHGITTPPVEFLAAPRRDLNLVYTPKAFQPA-----GETFDDSFTFVGPCIGDRKE-----------DGS 217 (392)
T ss_pred -----HHHHHHhCCCCCCHHHHhcCCcCcEEEeCChHhCCC-----ccccCCCeEEECCCCCCccc-----------cCC
Confidence 00000000 0000 1122334566666666553 34466679999998754321 123
Q ss_pred hhhccCCCceEEEeeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCcCCCCcccCCChhhhhhcCCCCceeecCChHh
Q 018483 162 WLNKQAPKSVIYVSFGSIASIDEKELLETAWGLANCEQPFLWVVRPGLVRGSNCLELLPINFQDSVGERGCIVEWAPQKE 241 (355)
Q Consensus 162 ~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~pq~~ 241 (355)
|.....++++||||+||+.....+.++.+++++.+.+++++|..+..... +....+ ++|+.+.+|+||.+
T Consensus 218 ~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~g~~~~~--~~~~~~--------~~~v~~~~~~p~~~ 287 (392)
T TIGR01426 218 WERPGDGRPVVLISLGTVFNNQPSFYRTCVEAFRDLDWHVVLSVGRGVDP--ADLGEL--------PPNVEVRQWVPQLE 287 (392)
T ss_pred CCCCCCCCCEEEEecCccCCCCHHHHHHHHHHHhcCCCeEEEEECCCCCh--hHhccC--------CCCeEEeCCCCHHH
Confidence 66555678999999999876566688899999999999999988754210 001122 34558889999999
Q ss_pred hhhcccCCceeeccCchhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEec--ccCHHHHHHHHHHHhcCchhHH
Q 018483 242 VLANDAVGGFWSHCGWNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELE--EFEGGTIKKAIKRLMVDTEGKE 319 (355)
Q Consensus 242 ~L~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~--~~~~~~l~~ai~~~l~~~~~~~ 319 (355)
+|.++++ +|||||+||++||+++|+|+|++|...||+.||+++++ +|+|+.+. +++.++|.++|+++|+| ++
T Consensus 288 ll~~~~~--~I~hgG~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~-~g~g~~l~~~~~~~~~l~~ai~~~l~~---~~ 361 (392)
T TIGR01426 288 ILKKADA--FITHGGMNSTMEALFNGVPMVAVPQGADQPMTARRIAE-LGLGRHLPPEEVTAEKLREAVLAVLSD---PR 361 (392)
T ss_pred HHhhCCE--EEECCCchHHHHHHHhCCCEEecCCcccHHHHHHHHHH-CCCEEEeccccCCHHHHHHHHHHHhcC---HH
Confidence 9999887 99999999999999999999999999999999999988 79999998 78999999999999999 78
Q ss_pred HHHHHHHHHHHHhhhhhcCCChHHHHHHHHHHH
Q 018483 320 MRKKAIHLKEKVELPLKEGGSCYNSLNDLVKKI 352 (355)
Q Consensus 320 ~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~l 352 (355)
|+++++++++.+++ .++..++.+.+.+.+
T Consensus 362 ~~~~~~~l~~~~~~----~~~~~~aa~~i~~~~ 390 (392)
T TIGR01426 362 YAERLRKMRAEIRE----AGGARRAADEIEGFL 390 (392)
T ss_pred HHHHHHHHHHHHHH----cCCHHHHHHHHHHhh
Confidence 99999999999984 455666666665544
No 26
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=99.97 E-value=7.9e-31 Score=250.38 Aligned_cols=156 Identities=26% Similarity=0.365 Sum_probs=130.4
Q ss_pred cchhhHhhhccCCCceEEEeeccccc-cCHHHHHHHHHHHHhCCCCEEEEEcCCCcCCCCcccCCChhhhhhcCCCCcee
Q 018483 156 DTNCISWLNKQAPKSVIYVSFGSIAS-IDEKELLETAWGLANCEQPFLWVVRPGLVRGSNCLELLPINFQDSVGERGCIV 234 (355)
Q Consensus 156 ~~~~~~~l~~~~~~~~v~vs~GS~~~-~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~ 234 (355)
+.++..|++. ++++|||++||+.. .....+..+++++...+.+++|..+...... ..+| +|+++.
T Consensus 228 ~~~~~~~~~~--~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~~~~~i~~~g~~~~~~----~~~~--------~~v~~~ 293 (401)
T cd03784 228 PPELWLFLAA--GRPPVYVGFGSMVVRDPEALARLDVEAVATLGQRAILSLGWGGLGA----EDLP--------DNVRVV 293 (401)
T ss_pred CHHHHHHHhC--CCCcEEEeCCCCcccCHHHHHHHHHHHHHHcCCeEEEEccCccccc----cCCC--------CceEEe
Confidence 3346788874 57899999999987 3456778899999999999999988643110 1233 455899
Q ss_pred ecCChHhhhhcccCCceeeccCchhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEec--ccCHHHHHHHHHHHh
Q 018483 235 EWAPQKEVLANDAVGGFWSHCGWNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELE--EFEGGTIKKAIKRLM 312 (355)
Q Consensus 235 ~~~pq~~~L~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~--~~~~~~l~~ai~~~l 312 (355)
+|+||.++|.|+++ ||||||+||++||+++|||+|++|+..||+.||+++++ +|+|+.+. .++.++|.++|++++
T Consensus 294 ~~~p~~~ll~~~d~--~I~hgG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~-~G~g~~l~~~~~~~~~l~~al~~~l 370 (401)
T cd03784 294 DFVPHDWLLPRCAA--VVHHGGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAE-LGAGPALDPRELTAERLAAALRRLL 370 (401)
T ss_pred CCCCHHHHhhhhhe--eeecCCchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHH-CCCCCCCCcccCCHHHHHHHHHHHh
Confidence 99999999999887 99999999999999999999999999999999999998 79999998 779999999999999
Q ss_pred cCchhHHHHHHHHHHHHHHh
Q 018483 313 VDTEGKEMRKKAIHLKEKVE 332 (355)
Q Consensus 313 ~~~~~~~~~~~a~~l~~~~~ 332 (355)
++ .++++++++++.++
T Consensus 371 ~~----~~~~~~~~~~~~~~ 386 (401)
T cd03784 371 DP----PSRRRAAALLRRIR 386 (401)
T ss_pred CH----HHHHHHHHHHHHHH
Confidence 86 45666777777775
No 27
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=99.96 E-value=3.2e-29 Score=237.29 Aligned_cols=168 Identities=24% Similarity=0.376 Sum_probs=145.1
Q ss_pred ceecCcccccCCCcCCCCCcccchhhHhhhccCCCceEEEeeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCcCCCC
Q 018483 135 AFTIGPFHKLVPTISGSLLKEDTNCISWLNKQAPKSVIYVSFGSIASIDEKELLETAWGLANCEQPFLWVVRPGLVRGSN 214 (355)
Q Consensus 135 v~~vGpl~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~ 214 (355)
..++||+...... +...|.. .++++||+|+||.... .+.++.+++++..++.++|...+. ...
T Consensus 215 ~~~~~~~~~~~~~----------~~~~~~~--~d~~~vyvslGt~~~~-~~l~~~~~~a~~~l~~~vi~~~~~-~~~--- 277 (406)
T COG1819 215 GPYIGPLLGEAAN----------ELPYWIP--ADRPIVYVSLGTVGNA-VELLAIVLEALADLDVRVIVSLGG-ARD--- 277 (406)
T ss_pred cCccccccccccc----------cCcchhc--CCCCeEEEEcCCcccH-HHHHHHHHHHHhcCCcEEEEeccc-ccc---
Confidence 6667776655432 1233422 5689999999999977 889999999999999999998866 211
Q ss_pred cccCCChhhhhhcCCCCceeecCChHhhhhcccCCceeeccCchhHHHHhhcCCcEEeccccCchhhhHHHHhhhhccee
Q 018483 215 CLELLPINFQDSVGERGCIVEWAPQKEVLANDAVGGFWSHCGWNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGL 294 (355)
Q Consensus 215 ~~~~lp~~~~~~~~~~~~~~~~~pq~~~L~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~ 294 (355)
....+|.|+ ++.+|+||..+|.++++ ||||||+||++||+++|||+|++|...||+.||.++++ +|+|+
T Consensus 278 ~~~~~p~n~--------~v~~~~p~~~~l~~ad~--vI~hGG~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~-~G~G~ 346 (406)
T COG1819 278 TLVNVPDNV--------IVADYVPQLELLPRADA--VIHHGGAGTTSEALYAGVPLVVIPDGADQPLNAERVEE-LGAGI 346 (406)
T ss_pred ccccCCCce--------EEecCCCHHHHhhhcCE--EEecCCcchHHHHHHcCCCEEEecCCcchhHHHHHHHH-cCCce
Confidence 134566666 89999999999999998 99999999999999999999999999999999999998 89999
Q ss_pred Eec--ccCHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHhh
Q 018483 295 ELE--EFEGGTIKKAIKRLMVDTEGKEMRKKAIHLKEKVEL 333 (355)
Q Consensus 295 ~l~--~~~~~~l~~ai~~~l~~~~~~~~~~~a~~l~~~~~~ 333 (355)
.++ .++.+.++++|+++|+| ++|+++++++++.+++
T Consensus 347 ~l~~~~l~~~~l~~av~~vL~~---~~~~~~~~~~~~~~~~ 384 (406)
T COG1819 347 ALPFEELTEERLRAAVNEVLAD---DSYRRAAERLAEEFKE 384 (406)
T ss_pred ecCcccCCHHHHHHHHHHHhcC---HHHHHHHHHHHHHhhh
Confidence 999 89999999999999999 8999999999999996
No 28
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=99.77 E-value=3.7e-17 Score=152.91 Aligned_cols=143 Identities=20% Similarity=0.177 Sum_probs=108.6
Q ss_pred CCCceEEEeeccccccC-HHHHHHHHHHHHhCCCCEEEEEcCCCcCCCCcccCCChhhhhhcCCCCceeecC-Ch-Hhhh
Q 018483 167 APKSVIYVSFGSIASID-EKELLETAWGLANCEQPFLWVVRPGLVRGSNCLELLPINFQDSVGERGCIVEWA-PQ-KEVL 243 (355)
Q Consensus 167 ~~~~~v~vs~GS~~~~~-~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~-pq-~~~L 243 (355)
+++++|+|..||++... ++.+.+++..+.. +.+|+|+++.+..+ . ...+ ..+..+.+|+ ++ .+++
T Consensus 183 ~~~~~iLv~GGS~Ga~~in~~~~~~l~~l~~-~~~vv~~~G~~~~~---------~-~~~~-~~~~~~~~f~~~~m~~~~ 250 (352)
T PRK12446 183 RKKPVITIMGGSLGAKKINETVREALPELLL-KYQIVHLCGKGNLD---------D-SLQN-KEGYRQFEYVHGELPDIL 250 (352)
T ss_pred CCCcEEEEECCccchHHHHHHHHHHHHhhcc-CcEEEEEeCCchHH---------H-HHhh-cCCcEEecchhhhHHHHH
Confidence 56789999999999843 4556666666543 48899999864211 1 0001 1223455776 43 4678
Q ss_pred hcccCCceeeccCchhHHHHhhcCCcEEecccc-----CchhhhHHHHhhhhcceeEec--ccCHHHHHHHHHHHhcCch
Q 018483 244 ANDAVGGFWSHCGWNSTLESICEGVPMLCKPFF-----GDQNLNMRYVCDVWNVGLELE--EFEGGTIKKAIKRLMVDTE 316 (355)
Q Consensus 244 ~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~-----~DQ~~na~~~~~~~g~g~~l~--~~~~~~l~~ai~~~l~~~~ 316 (355)
+++++ +|||||.+|+.|++++|+|+|++|+. +||..||+.+++ .|+|..+. +++.+.|.+++.++++|+
T Consensus 251 ~~adl--vIsr~G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~-~g~~~~l~~~~~~~~~l~~~l~~ll~~~- 326 (352)
T PRK12446 251 AITDF--VISRAGSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESFER-QGYASVLYEEDVTVNSLIKHVEELSHNN- 326 (352)
T ss_pred HhCCE--EEECCChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHHHH-CCCEEEcchhcCCHHHHHHHHHHHHcCH-
Confidence 88887 99999999999999999999999985 589999999998 79999997 899999999999999884
Q ss_pred hHHHHHHHHH
Q 018483 317 GKEMRKKAIH 326 (355)
Q Consensus 317 ~~~~~~~a~~ 326 (355)
+.|++++++
T Consensus 327 -~~~~~~~~~ 335 (352)
T PRK12446 327 -EKYKTALKK 335 (352)
T ss_pred -HHHHHHHHH
Confidence 356655544
No 29
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=99.72 E-value=1.4e-16 Score=147.38 Aligned_cols=218 Identities=15% Similarity=0.137 Sum_probs=139.5
Q ss_pred CCCCccEEEeCCccchHHHHHHHcCCCeEEEecchHHHHHHHhhchhhhhcCccccccccccccCCCcccchhHHhhhhh
Q 018483 7 PHDRISCIVYDSTMCFSQSVADHLKLPGICVRTSPAATMLAFAVFPRLHEQGYISFLESMSLDRVSDLLSLMLKELAASM 86 (355)
Q Consensus 7 ~~~~~D~vI~D~~~~~~~~iA~~lgiP~i~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~v~~~~~~~~~~l~~~~ 86 (355)
.+.+||+||+|. .+.+..+|+..|||++.+....... + +.... +
T Consensus 91 ~~~~pDlVIsD~-~~~~~~aa~~~giP~i~i~~~~~~~-----~-----~~~~~-----------~-------------- 134 (318)
T PF13528_consen 91 REFRPDLVISDF-YPLAALAARRAGIPVIVISNQYWFL-----H-----PNFWL-----------P-------------- 134 (318)
T ss_pred HhcCCCEEEEcC-hHHHHHHHHhcCCCEEEEEehHHcc-----c-----ccCCc-----------c--------------
Confidence 344899999995 5556788999999999887654210 0 00000 0
Q ss_pred hccCCchHHHHHHHHHh--hhccCcEEEEcCccccchHHHHHHHHhhCCCceecCcccccCCCcCCCCCcccchhhHhhh
Q 018483 87 KKITTDGMLELRAAVAD--SVKKCSALIVNTVDFLEQEALTKVQELFSASAFTIGPFHKLVPTISGSLLKEDTNCISWLN 164 (355)
Q Consensus 87 ~~~~~~~~~~~~~~~~~--~~~~~~~~l~nt~~~le~~~~~~~r~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~l~ 164 (355)
..........+... ....++..+.-++. .... . ...+..+||+...... ...
T Consensus 135 ---~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~------~--~~~~~~~~p~~~~~~~------~~~-------- 188 (318)
T PF13528_consen 135 ---WDQDFGRLIERYIDRYHFPPADRRLALSFY-PPLP------P--FFRVPFVGPIIRPEIR------ELP-------- 188 (318)
T ss_pred ---hhhhHHHHHHHhhhhccCCcccceecCCcc-cccc------c--cccccccCchhccccc------ccC--------
Confidence 00001111111111 12334444444433 1100 0 1226678888764332 000
Q ss_pred ccCCCceEEEeeccccccCHHHHHHHHHHHHhCC-CCEEEEEcCCCcCCCCcccCCChhhhhhcCCCCceeecC--ChHh
Q 018483 165 KQAPKSVIYVSFGSIASIDEKELLETAWGLANCE-QPFLWVVRPGLVRGSNCLELLPINFQDSVGERGCIVEWA--PQKE 241 (355)
Q Consensus 165 ~~~~~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~-~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~--pq~~ 241 (355)
..+++.|+|++|..... .+++++++.+ +.+++. +.... +.. .+|+.+.+|. .-.+
T Consensus 189 -~~~~~~iLv~~gg~~~~------~~~~~l~~~~~~~~~v~-g~~~~------~~~--------~~ni~~~~~~~~~~~~ 246 (318)
T PF13528_consen 189 -PEDEPKILVYFGGGGPG------DLIEALKALPDYQFIVF-GPNAA------DPR--------PGNIHVRPFSTPDFAE 246 (318)
T ss_pred -CCCCCEEEEEeCCCcHH------HHHHHHHhCCCCeEEEE-cCCcc------ccc--------CCCEEEeecChHHHHH
Confidence 12456799999987653 6667777766 566655 44310 111 3444777765 3456
Q ss_pred hhhcccCCceeeccCchhHHHHhhcCCcEEeccc--cCchhhhHHHHhhhhcceeEec--ccCHHHHHHHHHHH
Q 018483 242 VLANDAVGGFWSHCGWNSTLESICEGVPMLCKPF--FGDQNLNMRYVCDVWNVGLELE--EFEGGTIKKAIKRL 311 (355)
Q Consensus 242 ~L~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~--~~DQ~~na~~~~~~~g~g~~l~--~~~~~~l~~ai~~~ 311 (355)
+|+.+++ +|||||.||++|++++|+|+|++|. +.+|..||+.+++ +|+|+.+. +++++.|+++|+++
T Consensus 247 ~m~~ad~--vIs~~G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~-~G~~~~~~~~~~~~~~l~~~l~~~ 317 (318)
T PF13528_consen 247 LMAAADL--VISKGGYTTISEALALGKPALVIPRPGQDEQEYNARKLEE-LGLGIVLSQEDLTPERLAEFLERL 317 (318)
T ss_pred HHHhCCE--EEECCCHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHH-CCCeEEcccccCCHHHHHHHHhcC
Confidence 8888877 9999999999999999999999999 7899999999998 89999998 89999999998764
No 30
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=99.64 E-value=1.5e-14 Score=133.95 Aligned_cols=124 Identities=22% Similarity=0.183 Sum_probs=85.1
Q ss_pred CCceEEEeeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCcCCCCcccCCChhhhhhcCCCCceeecCC--hHhhhhc
Q 018483 168 PKSVIYVSFGSIASIDEKELLETAWGLANCEQPFLWVVRPGLVRGSNCLELLPINFQDSVGERGCIVEWAP--QKEVLAN 245 (355)
Q Consensus 168 ~~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~p--q~~~L~~ 245 (355)
.++.|+|.+||... +.+++++.+.+. +.+++...... ...++ +|+.+.+|.| ..+.|..
T Consensus 187 ~~~~iLv~~g~~~~------~~l~~~l~~~~~-~~~i~~~~~~~----~~~~~--------~~v~~~~~~~~~~~~~l~~ 247 (321)
T TIGR00661 187 GEDYILVYIGFEYR------YKILELLGKIAN-VKFVCYSYEVA----KNSYN--------ENVEIRRITTDNFKELIKN 247 (321)
T ss_pred CCCcEEEECCcCCH------HHHHHHHHhCCC-eEEEEeCCCCC----ccccC--------CCEEEEECChHHHHHHHHh
Confidence 45678888888553 345677766553 22332221100 01122 4447789987 2345555
Q ss_pred ccCCceeeccCchhHHHHhhcCCcEEeccccC--chhhhHHHHhhhhcceeEecccCHHHHHHHHHHHhcC
Q 018483 246 DAVGGFWSHCGWNSTLESICEGVPMLCKPFFG--DQNLNMRYVCDVWNVGLELEEFEGGTIKKAIKRLMVD 314 (355)
Q Consensus 246 ~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~--DQ~~na~~~~~~~g~g~~l~~~~~~~l~~ai~~~l~~ 314 (355)
+++ +|||||++|++|++++|+|++++|..+ ||..||+.+++ .|+|+.++..+. ++.+++.++++|
T Consensus 248 ad~--vI~~~G~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~-~g~~~~l~~~~~-~~~~~~~~~~~~ 314 (321)
T TIGR00661 248 AEL--VITHGGFSLISEALSLGKPLIVIPDLGQFEQGNNAVKLED-LGCGIALEYKEL-RLLEAILDIRNM 314 (321)
T ss_pred CCE--EEECCChHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHH-CCCEEEcChhhH-HHHHHHHhcccc
Confidence 555 999999999999999999999999965 89999999998 799999882222 555566667766
No 31
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.61 E-value=6.1e-15 Score=136.89 Aligned_cols=147 Identities=21% Similarity=0.237 Sum_probs=112.7
Q ss_pred CCceEEEeecccccc-CHHHHHHHHHHHHhCCCCEEEEEcCCCcCCCCcccCCChhhhhhcC-CC-CceeecCChHh-hh
Q 018483 168 PKSVIYVSFGSIASI-DEKELLETAWGLANCEQPFLWVVRPGLVRGSNCLELLPINFQDSVG-ER-GCIVEWAPQKE-VL 243 (355)
Q Consensus 168 ~~~~v~vs~GS~~~~-~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~-~~-~~~~~~~pq~~-~L 243 (355)
++++|+|..||++.. -++.+.+++..+.+ ++.+++.++.+.. +.+..... .+ ..+.+|.+++. ++
T Consensus 182 ~~~~ilV~GGS~Ga~~ln~~v~~~~~~l~~-~~~v~~~~G~~~~----------~~~~~~~~~~~~~~v~~f~~dm~~~~ 250 (357)
T COG0707 182 DKKTILVTGGSQGAKALNDLVPEALAKLAN-RIQVIHQTGKNDL----------EELKSAYNELGVVRVLPFIDDMAALL 250 (357)
T ss_pred CCcEEEEECCcchhHHHHHHHHHHHHHhhh-CeEEEEEcCcchH----------HHHHHHHhhcCcEEEeeHHhhHHHHH
Confidence 688999999999983 35666666666665 6788888876421 11111111 11 45678888765 66
Q ss_pred hcccCCceeeccCchhHHHHhhcCCcEEecccc----CchhhhHHHHhhhhcceeEec--ccCHHHHHHHHHHHhcCch-
Q 018483 244 ANDAVGGFWSHCGWNSTLESICEGVPMLCKPFF----GDQNLNMRYVCDVWNVGLELE--EFEGGTIKKAIKRLMVDTE- 316 (355)
Q Consensus 244 ~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~----~DQ~~na~~~~~~~g~g~~l~--~~~~~~l~~ai~~~l~~~~- 316 (355)
+.+++ +||++|++|+.|++++|+|+|.+|+. +||..||+.+++ .|+|..++ ++|.+.+.+.|.+++++++
T Consensus 251 ~~ADL--vIsRaGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~~-~gaa~~i~~~~lt~~~l~~~i~~l~~~~~~ 327 (357)
T COG0707 251 AAADL--VISRAGALTIAELLALGVPAILVPYPPGADGHQEYNAKFLEK-AGAALVIRQSELTPEKLAELILRLLSNPEK 327 (357)
T ss_pred HhccE--EEeCCcccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHHHh-CCCEEEeccccCCHHHHHHHHHHHhcCHHH
Confidence 66666 99999999999999999999999984 489999999998 69999999 8999999999999998854
Q ss_pred hHHHHHHHHHHH
Q 018483 317 GKEMRKKAIHLK 328 (355)
Q Consensus 317 ~~~~~~~a~~l~ 328 (355)
..+|+++++++.
T Consensus 328 l~~m~~~a~~~~ 339 (357)
T COG0707 328 LKAMAENAKKLG 339 (357)
T ss_pred HHHHHHHHHhcC
Confidence 455555555543
No 32
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=99.59 E-value=1.8e-16 Score=132.75 Aligned_cols=135 Identities=21% Similarity=0.251 Sum_probs=96.1
Q ss_pred eEEEeecccccc-CHHHHHHHHHHHHhC--CCCEEEEEcCCCcCCCCcccCCChhhhhhcCCCCceeecCC-hHhhhhcc
Q 018483 171 VIYVSFGSIASI-DEKELLETAWGLANC--EQPFLWVVRPGLVRGSNCLELLPINFQDSVGERGCIVEWAP-QKEVLAND 246 (355)
Q Consensus 171 ~v~vs~GS~~~~-~~~~~~~~~~~l~~~--~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~p-q~~~L~~~ 246 (355)
+|+|++||.+.. -.+.+..++..+... +.+|++.++.... ......+ .....++.+.+|.+ ...++..+
T Consensus 1 tilv~gGs~g~~~l~~~v~~~~~~~~~~~~~~~viv~~G~~~~------~~~~~~~-~~~~~~v~~~~~~~~m~~~m~~a 73 (167)
T PF04101_consen 1 TILVTGGSQGARDLNRLVLKILELLAEKHKNIQVIVQTGKNNY------EELKIKV-ENFNPNVKVFGFVDNMAELMAAA 73 (167)
T ss_dssp -EEEEETTTSHHHHHCCCCCHHHHHHHHHHHCCCCCCCTTCEC------HHHCCCH-CCTTCCCEEECSSSSHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHhhcCCCcEEEEEECCCcH------HHHHHHH-hccCCcEEEEechhhHHHHHHHc
Confidence 589999998762 123333444444432 5788888886521 1111111 11114567889999 56788899
Q ss_pred cCCceeeccCchhHHHHhhcCCcEEeccccC----chhhhHHHHhhhhcceeEec--ccCHHHHHHHHHHHhcCc
Q 018483 247 AVGGFWSHCGWNSTLESICEGVPMLCKPFFG----DQNLNMRYVCDVWNVGLELE--EFEGGTIKKAIKRLMVDT 315 (355)
Q Consensus 247 ~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~----DQ~~na~~~~~~~g~g~~l~--~~~~~~l~~ai~~~l~~~ 315 (355)
++ +|||||.+|++|++++|+|+|++|... ||..||..+++ .|+|+.+. ..+.+.|.++|.+++.++
T Consensus 74 Dl--vIs~aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~-~g~~~~~~~~~~~~~~L~~~i~~l~~~~ 145 (167)
T PF04101_consen 74 DL--VISHAGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAK-KGAAIMLDESELNPEELAEAIEELLSDP 145 (167)
T ss_dssp SE--EEECS-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHH-CCCCCCSECCC-SCCCHHHHHHCHCCCH
T ss_pred CE--EEeCCCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHH-cCCccccCcccCCHHHHHHHHHHHHcCc
Confidence 98 999999999999999999999999988 99999999998 69999998 677899999999999884
No 33
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.40 E-value=9.8e-12 Score=116.40 Aligned_cols=148 Identities=19% Similarity=0.200 Sum_probs=99.5
Q ss_pred CCCceEEEeeccccccC-HHHHHHHHHHHHhCCCCEEEEEcCCCcCCCCcccCCChhhhhhcCCCCceeecC-ChHhhhh
Q 018483 167 APKSVIYVSFGSIASID-EKELLETAWGLANCEQPFLWVVRPGLVRGSNCLELLPINFQDSVGERGCIVEWA-PQKEVLA 244 (355)
Q Consensus 167 ~~~~~v~vs~GS~~~~~-~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~-pq~~~L~ 244 (355)
+++++|++..|+..... .+.+..++..+.+.+..+++.++.+. .+.+.+.+.+ ..+|+.+.+|+ +...+|+
T Consensus 179 ~~~~~i~~~~g~~~~~~~~~~l~~a~~~l~~~~~~~~~i~G~g~------~~~l~~~~~~-~~~~v~~~g~~~~~~~~l~ 251 (350)
T cd03785 179 PGKPTLLVFGGSQGARAINEAVPEALAELLRKRLQVIHQTGKGD------LEEVKKAYEE-LGVNYEVFPFIDDMAAAYA 251 (350)
T ss_pred CCCeEEEEECCcHhHHHHHHHHHHHHHHhhccCeEEEEEcCCcc------HHHHHHHHhc-cCCCeEEeehhhhHHHHHH
Confidence 44567777777765421 12333444445433455666766542 1112111111 13466778887 4456787
Q ss_pred cccCCceeeccCchhHHHHhhcCCcEEeccc----cCchhhhHHHHhhhhcceeEec--ccCHHHHHHHHHHHhcCch-h
Q 018483 245 NDAVGGFWSHCGWNSTLESICEGVPMLCKPF----FGDQNLNMRYVCDVWNVGLELE--EFEGGTIKKAIKRLMVDTE-G 317 (355)
Q Consensus 245 ~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~----~~DQ~~na~~~~~~~g~g~~l~--~~~~~~l~~ai~~~l~~~~-~ 317 (355)
.+++ +|+|+|.++++||+++|+|+|+.|. .++|..|+..+.+ .|.|+.+. +.+.+++.++|.++++|++ .
T Consensus 252 ~ad~--~v~~sg~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~~l~~-~g~g~~v~~~~~~~~~l~~~i~~ll~~~~~~ 328 (350)
T cd03785 252 AADL--VISRAGASTVAELAALGLPAILIPLPYAADDHQTANARALVK-AGAAVLIPQEELTPERLAAALLELLSDPERL 328 (350)
T ss_pred hcCE--EEECCCHhHHHHHHHhCCCEEEeecCCCCCCcHHHhHHHHHh-CCCEEEEecCCCCHHHHHHHHHHHhcCHHHH
Confidence 7777 9999999999999999999999986 4678999999988 69999988 4699999999999998843 3
Q ss_pred HHHHHHH
Q 018483 318 KEMRKKA 324 (355)
Q Consensus 318 ~~~~~~a 324 (355)
+.+++++
T Consensus 329 ~~~~~~~ 335 (350)
T cd03785 329 KAMAEAA 335 (350)
T ss_pred HHHHHHH
Confidence 3344443
No 34
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.32 E-value=2.6e-11 Score=114.07 Aligned_cols=166 Identities=14% Similarity=0.131 Sum_probs=111.0
Q ss_pred CCceEEEeeccccccCHHHHHHHHHHHHhCCC--CEEEEEcCCCcCCCCcccCCChhhhhhcCCCCceeecCC-hHhhhh
Q 018483 168 PKSVIYVSFGSIASIDEKELLETAWGLANCEQ--PFLWVVRPGLVRGSNCLELLPINFQDSVGERGCIVEWAP-QKEVLA 244 (355)
Q Consensus 168 ~~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~--~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~p-q~~~L~ 244 (355)
+.++|++..|+.... .....+.+++.+... .++|.++.+.. +.+.... + ..-++.+.+|+. ..++++
T Consensus 182 ~~~~i~~~gg~~~~~--~~~~~l~~a~~~~~~~~~~~~~~G~g~~------~~~~~~~-~-~~~~v~~~g~~~~~~~~~~ 251 (357)
T PRK00726 182 GKPTLLVVGGSQGAR--VLNEAVPEALALLPEALQVIHQTGKGDL------EEVRAAY-A-AGINAEVVPFIDDMAAAYA 251 (357)
T ss_pred CCeEEEEECCcHhHH--HHHHHHHHHHHHhhhCcEEEEEcCCCcH------HHHHHHh-h-cCCcEEEeehHhhHHHHHH
Confidence 456777766664431 112223355544322 45566665431 1111111 1 111246678884 457888
Q ss_pred cccCCceeeccCchhHHHHhhcCCcEEeccc----cCchhhhHHHHhhhhcceeEec--ccCHHHHHHHHHHHhcCchhH
Q 018483 245 NDAVGGFWSHCGWNSTLESICEGVPMLCKPF----FGDQNLNMRYVCDVWNVGLELE--EFEGGTIKKAIKRLMVDTEGK 318 (355)
Q Consensus 245 ~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~----~~DQ~~na~~~~~~~g~g~~l~--~~~~~~l~~ai~~~l~~~~~~ 318 (355)
.+++ +|+|+|.++++||+++|+|+|++|. .+||..|+..+.+ .|.|..+. +++.+.+.++|.++++| +
T Consensus 252 ~~d~--~i~~~g~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~-~~~g~~~~~~~~~~~~l~~~i~~ll~~---~ 325 (357)
T PRK00726 252 AADL--VICRAGASTVAELAAAGLPAILVPLPHAADDHQTANARALVD-AGAALLIPQSDLTPEKLAEKLLELLSD---P 325 (357)
T ss_pred hCCE--EEECCCHHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHH-CCCEEEEEcccCCHHHHHHHHHHHHcC---H
Confidence 8888 9999999999999999999999997 4689999999988 69999997 67899999999999999 5
Q ss_pred HHHHHHHHHHHHHhhhhhcCCChHHHHHHHHHHHH
Q 018483 319 EMRKKAIHLKEKVELPLKEGGSCYNSLNDLVKKIL 353 (355)
Q Consensus 319 ~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~l~ 353 (355)
.+++++.+-+.... +.++..+..+.+.+.++
T Consensus 326 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 356 (357)
T PRK00726 326 ERLEAMAEAARALG----KPDAAERLADLIEELAR 356 (357)
T ss_pred HHHHHHHHHHHhcC----CcCHHHHHHHHHHHHhh
Confidence 55555544444433 45666677777766654
No 35
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.31 E-value=3.8e-10 Score=107.20 Aligned_cols=166 Identities=13% Similarity=0.120 Sum_probs=105.3
Q ss_pred CCCceEEEeeccccccCH-HHHHHHHHHHH-----hCCCCEEEEEcCCCcCCCCcccCCChhhhhh-cCCCCceeecCCh
Q 018483 167 APKSVIYVSFGSIASIDE-KELLETAWGLA-----NCEQPFLWVVRPGLVRGSNCLELLPINFQDS-VGERGCIVEWAPQ 239 (355)
Q Consensus 167 ~~~~~v~vs~GS~~~~~~-~~~~~~~~~l~-----~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~-~~~~~~~~~~~pq 239 (355)
+++++|++..|+.+.... ..++.+.+.+. ..+.++++.++.+.. +-+.+.+. ...++.+.+|+++
T Consensus 204 ~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~~--------~~~~L~~~~~~~~v~~~G~~~~ 275 (382)
T PLN02605 204 EDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQVVVICGRNKK--------LQSKLESRDWKIPVKVRGFVTN 275 (382)
T ss_pred CCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCceEEEEECCCHH--------HHHHHHhhcccCCeEEEecccc
Confidence 456788888887765332 23333333221 234566777765310 00111111 1234567799886
Q ss_pred H-hhhhcccCCceeeccCchhHHHHhhcCCcEEeccccCchh-hhHHHHhhhhcceeEecccCHHHHHHHHHHHhcC-ch
Q 018483 240 K-EVLANDAVGGFWSHCGWNSTLESICEGVPMLCKPFFGDQN-LNMRYVCDVWNVGLELEEFEGGTIKKAIKRLMVD-TE 316 (355)
Q Consensus 240 ~-~~L~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~-~na~~~~~~~g~g~~l~~~~~~~l~~ai~~~l~~-~~ 316 (355)
. ++++.+++ +|+.+|.+|++||+++|+|+|+.+....|. .|+..+.+ .|.|+.+ -+.+++.++|.+++++ ++
T Consensus 276 ~~~l~~aaDv--~V~~~g~~ti~EAma~g~PvI~~~~~pgqe~gn~~~i~~-~g~g~~~--~~~~~la~~i~~ll~~~~~ 350 (382)
T PLN02605 276 MEEWMGACDC--IITKAGPGTIAEALIRGLPIILNGYIPGQEEGNVPYVVD-NGFGAFS--ESPKEIARIVAEWFGDKSD 350 (382)
T ss_pred HHHHHHhCCE--EEECCCcchHHHHHHcCCCEEEecCCCccchhhHHHHHh-CCceeec--CCHHHHHHHHHHHHcCCHH
Confidence 4 47777777 999999999999999999999998766665 69998887 5999875 5788999999999987 43
Q ss_pred -hHHHHHHHHHHHHHHhhhhhcCCChHHHHHHHHHHHH
Q 018483 317 -GKEMRKKAIHLKEKVELPLKEGGSCYNSLNDLVKKIL 353 (355)
Q Consensus 317 -~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~l~ 353 (355)
.+.+++++++.+ ...++...++.+.+.+.
T Consensus 351 ~~~~m~~~~~~~~--------~~~a~~~i~~~l~~~~~ 380 (382)
T PLN02605 351 ELEAMSENALKLA--------RPEAVFDIVHDLHELVR 380 (382)
T ss_pred HHHHHHHHHHHhc--------CCchHHHHHHHHHHHhh
Confidence 333444433322 23445555555555443
No 36
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=99.25 E-value=1.2e-10 Score=110.44 Aligned_cols=170 Identities=12% Similarity=-0.023 Sum_probs=107.6
Q ss_pred CCCceEEEeeccccccCHHHHHHHHHHHHh---C--CCCEEEEEcCCCcCCCCcccCCChhhhhhcCCCCceeecC-ChH
Q 018483 167 APKSVIYVSFGSIASIDEKELLETAWGLAN---C--EQPFLWVVRPGLVRGSNCLELLPINFQDSVGERGCIVEWA-PQK 240 (355)
Q Consensus 167 ~~~~~v~vs~GS~~~~~~~~~~~~~~~l~~---~--~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~-pq~ 240 (355)
+++++|.+..||...........+++++.. . +.++++...... +. ..+ +.+.+....+..+..+. +..
T Consensus 189 ~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~~vi~~~~~~--~~---~~~-~~~~~~~~~~~~v~~~~~~~~ 262 (385)
T TIGR00215 189 HNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLRRVLPVVNFK--RR---LQF-EQIKAEYGPDLQLHLIDGDAR 262 (385)
T ss_pred CCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeEEEEEeCCch--hH---HHH-HHHHHHhCCCCcEEEECchHH
Confidence 457888888899876323445555544443 2 334555433221 00 000 11111111122222221 334
Q ss_pred hhhhcccCCceeeccCchhHHHHhhcCCcEEec----cccC---------chhhhHHHHhhhhcceeEec--ccCHHHHH
Q 018483 241 EVLANDAVGGFWSHCGWNSTLESICEGVPMLCK----PFFG---------DQNLNMRYVCDVWNVGLELE--EFEGGTIK 305 (355)
Q Consensus 241 ~~L~~~~~~~~I~HgG~~s~~eal~~GvP~l~~----P~~~---------DQ~~na~~~~~~~g~g~~l~--~~~~~~l~ 305 (355)
++++.+++ +|+.+|..|+ |++++|+|+|++ |+.. +|..|+..+++ .++...+. ++|++.|.
T Consensus 263 ~~l~aADl--~V~~SGt~tl-Ea~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~nil~~-~~~~pel~q~~~~~~~l~ 338 (385)
T TIGR00215 263 KAMFAADA--ALLASGTAAL-EAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNILAN-RLLVPELLQEECTPHPLA 338 (385)
T ss_pred HHHHhCCE--EeecCCHHHH-HHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHHhcC-CccchhhcCCCCCHHHHH
Confidence 57777777 9999999988 999999999999 8742 37889999987 58888877 89999999
Q ss_pred HHHHHHhcCc----h-hHHHHHHHHHHHHHHhhhhhcCCChHHHHHHHHH
Q 018483 306 KAIKRLMVDT----E-GKEMRKKAIHLKEKVELPLKEGGSCYNSLNDLVK 350 (355)
Q Consensus 306 ~ai~~~l~~~----~-~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~ 350 (355)
+.+.++++|+ + .+.+++..+++.+.+ .++|.+.++.+.+++
T Consensus 339 ~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l----~~~~~~~~~a~~i~~ 384 (385)
T TIGR00215 339 IALLLLLENGLKAYKEMHRERQFFEELRQRI----YCNADSERAAQAVLE 384 (385)
T ss_pred HHHHHHhcCCcccHHHHHHHHHHHHHHHHHh----cCCCHHHHHHHHHhh
Confidence 9999999995 3 444555555554444 466777777766554
No 37
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.24 E-value=6.9e-10 Score=105.29 Aligned_cols=134 Identities=14% Similarity=0.189 Sum_probs=96.3
Q ss_pred CCCceEEEeeccccccCHHHHHHHHHHHHhC-CCCEEEEEcCCCcCCCCcccCCChhhhh---hcCCCCceeecCChH-h
Q 018483 167 APKSVIYVSFGSIASIDEKELLETAWGLANC-EQPFLWVVRPGLVRGSNCLELLPINFQD---SVGERGCIVEWAPQK-E 241 (355)
Q Consensus 167 ~~~~~v~vs~GS~~~~~~~~~~~~~~~l~~~-~~~~i~~~~~~~~~~~~~~~~lp~~~~~---~~~~~~~~~~~~pq~-~ 241 (355)
+++++|++..|+.+.. +.+..+++++.+. +.++++..+.+.. +.+.+.+ ...+++.+.+|+++. +
T Consensus 200 ~~~~~il~~~G~~~~~--k~~~~li~~l~~~~~~~~viv~G~~~~--------~~~~l~~~~~~~~~~v~~~g~~~~~~~ 269 (380)
T PRK13609 200 PNKKILLIMAGAHGVL--GNVKELCQSLMSVPDLQVVVVCGKNEA--------LKQSLEDLQETNPDALKVFGYVENIDE 269 (380)
T ss_pred CCCcEEEEEcCCCCCC--cCHHHHHHHHhhCCCcEEEEEeCCCHH--------HHHHHHHHHhcCCCcEEEEechhhHHH
Confidence 3467788888887642 2345667777553 5677777654310 0011111 112456778999874 6
Q ss_pred hhhcccCCceeeccCchhHHHHhhcCCcEEec-cccCchhhhHHHHhhhhcceeEecccCHHHHHHHHHHHhcCc
Q 018483 242 VLANDAVGGFWSHCGWNSTLESICEGVPMLCK-PFFGDQNLNMRYVCDVWNVGLELEEFEGGTIKKAIKRLMVDT 315 (355)
Q Consensus 242 ~L~~~~~~~~I~HgG~~s~~eal~~GvP~l~~-P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~l~~ai~~~l~~~ 315 (355)
+++.+++ +|+.+|..|+.||+++|+|+|+. |..++|..|+..+.+ .|+|+.. -+.+++.++|.++++|+
T Consensus 270 l~~~aD~--~v~~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~-~G~~~~~--~~~~~l~~~i~~ll~~~ 339 (380)
T PRK13609 270 LFRVTSC--MITKPGGITLSEAAALGVPVILYKPVPGQEKENAMYFER-KGAAVVI--RDDEEVFAKTEALLQDD 339 (380)
T ss_pred HHHhccE--EEeCCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHh-CCcEEEE--CCHHHHHHHHHHHHCCH
Confidence 8888887 99999989999999999999985 677778889988877 5988765 46789999999999984
No 38
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=99.22 E-value=1.8e-09 Score=102.74 Aligned_cols=279 Identities=16% Similarity=0.097 Sum_probs=151.9
Q ss_pred CccEEEeCCccchHHHHHHHcCCCeEEEecchHHHHHHHhhchhhhhcCccccccccccccCCCcccchhHHhhhhhhcc
Q 018483 10 RISCIVYDSTMCFSQSVADHLKLPGICVRTSPAATMLAFAVFPRLHEQGYISFLESMSLDRVSDLLSLMLKELAASMKKI 89 (355)
Q Consensus 10 ~~D~vI~D~~~~~~~~iA~~lgiP~i~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~v~~~~~~~~~~l~~~~~~~ 89 (355)
+||+||.=.-.. ...+|...|+|++++.|.-... .+. ..+.. ...+++.+.++.....| +
T Consensus 93 ~p~~v~~~Gg~v-~~~aA~~~~~p~~~~~~~esn~------~~~-~~~~~---~~~~~~~~~~G~~~~p~-e-------- 152 (396)
T TIGR03492 93 KGDLIVAVGDIV-PLLFAWLSGKPYAFVGTAKSDY------YWE-SGPRR---SPSDEYHRLEGSLYLPW-E-------- 152 (396)
T ss_pred cCCEEEEECcHH-HHHHHHHcCCCceEEEeeccce------eec-CCCCC---ccchhhhccCCCccCHH-H--------
Confidence 689887655333 7778999999999976653211 100 00110 11233344444332222 1
Q ss_pred CCchHHHHHHHHHhhhccCcEEEEcCccccchHHHHHHHHhhCCCceecC-cccccCCCcCCCCCcccchhhHhhhccCC
Q 018483 90 TTDGMLELRAAVADSVKKCSALIVNTVDFLEQEALTKVQELFSASAFTIG-PFHKLVPTISGSLLKEDTNCISWLNKQAP 168 (355)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~l~nt~~~le~~~~~~~r~~~~~~v~~vG-pl~~~~~~~~~~~~~~~~~~~~~l~~~~~ 168 (355)
...-..+.++.+++.+.. ..+++++ .+.++.++| |+...-.. ... .. + .++
T Consensus 153 ----------~n~l~~~~a~~v~~~~~~-----t~~~l~~-~g~k~~~vGnPv~d~l~~-------~~~--~~-l--~~~ 204 (396)
T TIGR03492 153 ----------RWLMRSRRCLAVFVRDRL-----TARDLRR-QGVRASYLGNPMMDGLEP-------PER--KP-L--LTG 204 (396)
T ss_pred ----------HHHhhchhhCEEeCCCHH-----HHHHHHH-CCCeEEEeCcCHHhcCcc-------ccc--cc-c--CCC
Confidence 011112346667765522 2233333 235699999 44433221 010 01 1 234
Q ss_pred CceEEEeeccccccCHHHHHHHHHHHHh----CCCCEEEEEcCCCcCCCCcccC-CCh-hhhh---------hc-CCCCc
Q 018483 169 KSVIYVSFGSIASIDEKELLETAWGLAN----CEQPFLWVVRPGLVRGSNCLEL-LPI-NFQD---------SV-GERGC 232 (355)
Q Consensus 169 ~~~v~vs~GS~~~~~~~~~~~~~~~l~~----~~~~~i~~~~~~~~~~~~~~~~-lp~-~~~~---------~~-~~~~~ 232 (355)
+++|.+-.||........+..+++++.. .+..|++.+.++.... . ... +.+ +... .. .++..
T Consensus 205 ~~~lllLpGSR~ae~~~~lp~~l~al~~L~~~~~~~~v~~~~~~~~~~-~-~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 282 (396)
T TIGR03492 205 RFRIALLPGSRPPEAYRNLKLLLRALEALPDSQPFVFLAAIVPSLSLE-K-LQAILEDLGWQLEGSSEDQTSLFQKGTLE 282 (396)
T ss_pred CCEEEEECCCCHHHHHccHHHHHHHHHHHhhCCCeEEEEEeCCCCCHH-H-HHHHHHhcCceecCCccccchhhccCceE
Confidence 6789999999976322333444444443 3677888873321000 0 000 000 1000 00 01223
Q ss_pred eeecCCh-HhhhhcccCCceeeccCchhHHHHhhcCCcEEeccccCchhhhHHHHhhhh----cceeEecccCHHHHHHH
Q 018483 233 IVEWAPQ-KEVLANDAVGGFWSHCGWNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVW----NVGLELEEFEGGTIKKA 307 (355)
Q Consensus 233 ~~~~~pq-~~~L~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~----g~g~~l~~~~~~~l~~a 307 (355)
+..+..+ .++++.+++ +|+.+|..| .|++..|+|+|++|+-.+|. |+...++ . |.++.+.+.+.+.+.++
T Consensus 283 v~~~~~~~~~~l~~ADl--vI~rSGt~T-~E~a~lg~P~Ilip~~~~q~-na~~~~~-~~~l~g~~~~l~~~~~~~l~~~ 357 (396)
T TIGR03492 283 VLLGRGAFAEILHWADL--GIAMAGTAT-EQAVGLGKPVIQLPGKGPQF-TYGFAEA-QSRLLGGSVFLASKNPEQAAQV 357 (396)
T ss_pred EEechHhHHHHHHhCCE--EEECcCHHH-HHHHHhCCCEEEEeCCCCHH-HHHHHHh-hHhhcCCEEecCCCCHHHHHHH
Confidence 4445433 457888887 999999877 99999999999999888887 9877654 2 66777666666999999
Q ss_pred HHHHhcCchhHHHHHHHH-HHHHHHhhhhhcCCChHHHHHHHHH
Q 018483 308 IKRLMVDTEGKEMRKKAI-HLKEKVELPLKEGGSCYNSLNDLVK 350 (355)
Q Consensus 308 i~~~l~~~~~~~~~~~a~-~l~~~~~~a~~~~g~~~~~~~~~~~ 350 (355)
+.++++| +..+++.. +..+.+. .++.+.+..+.+.+
T Consensus 358 l~~ll~d---~~~~~~~~~~~~~~lg----~~~a~~~ia~~i~~ 394 (396)
T TIGR03492 358 VRQLLAD---PELLERCRRNGQERMG----PPGASARIAESILK 394 (396)
T ss_pred HHHHHcC---HHHHHHHHHHHHHhcC----CCCHHHHHHHHHHH
Confidence 9999998 44444333 2333332 44555555544443
No 39
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=99.11 E-value=1.6e-09 Score=102.71 Aligned_cols=105 Identities=14% Similarity=0.112 Sum_probs=68.8
Q ss_pred HhhhhcccCCceeeccCchhHHHHhhcCCcEEecccc--------Cchhhh-----HHHHhhhhcceeEec--ccCHHHH
Q 018483 240 KEVLANDAVGGFWSHCGWNSTLESICEGVPMLCKPFF--------GDQNLN-----MRYVCDVWNVGLELE--EFEGGTI 304 (355)
Q Consensus 240 ~~~L~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~--------~DQ~~n-----a~~~~~~~g~g~~l~--~~~~~~l 304 (355)
..+++.+++ +|+.+|.+++ |++++|+|+|+.|-. .+|..| +..+++ .+++..+. ..+++.+
T Consensus 256 ~~~~~~aDl--~v~~sG~~~l-Ea~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~l 331 (380)
T PRK00025 256 REAMAAADA--ALAASGTVTL-ELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNLLAG-RELVPELLQEEATPEKL 331 (380)
T ss_pred HHHHHhCCE--EEECccHHHH-HHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHHhcC-CCcchhhcCCCCCHHHH
Confidence 457777777 9999998887 999999999999542 123333 233333 23333333 7889999
Q ss_pred HHHHHHHhcCch-hHHHHHHHHHHHHHHhhhhhcCCChHHHHHHHHHHHH
Q 018483 305 KKAIKRLMVDTE-GKEMRKKAIHLKEKVELPLKEGGSCYNSLNDLVKKIL 353 (355)
Q Consensus 305 ~~ai~~~l~~~~-~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~l~ 353 (355)
.+++.++++|++ .++++++++++.+.+ ..+.+.+.++.+.+.+.
T Consensus 332 ~~~i~~ll~~~~~~~~~~~~~~~~~~~~-----~~~a~~~~~~~i~~~~~ 376 (380)
T PRK00025 332 ARALLPLLADGARRQALLEGFTELHQQL-----RCGADERAAQAVLELLK 376 (380)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHh-----CCCHHHHHHHHHHHHhh
Confidence 999999999954 445555555454443 24555566666655443
No 40
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.09 E-value=3.5e-09 Score=100.87 Aligned_cols=163 Identities=17% Similarity=0.134 Sum_probs=109.4
Q ss_pred CCCceEEEeeccccccCHHHHHHHHHHHHh--CCCCEEEEEcCCCcCCCCcccCCChhhhhh--cCCCCceeecCChH-h
Q 018483 167 APKSVIYVSFGSIASIDEKELLETAWGLAN--CEQPFLWVVRPGLVRGSNCLELLPINFQDS--VGERGCIVEWAPQK-E 241 (355)
Q Consensus 167 ~~~~~v~vs~GS~~~~~~~~~~~~~~~l~~--~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~--~~~~~~~~~~~pq~-~ 241 (355)
+++++|++..|+.+.. +.+..+++++.+ .+.+++++.+.+. .+-+.+.+. ..+++.+.+|+++. +
T Consensus 200 ~~~~~ilv~~G~lg~~--k~~~~li~~~~~~~~~~~~vvv~G~~~--------~l~~~l~~~~~~~~~v~~~G~~~~~~~ 269 (391)
T PRK13608 200 PDKQTILMSAGAFGVS--KGFDTMITDILAKSANAQVVMICGKSK--------ELKRSLTAKFKSNENVLILGYTKHMNE 269 (391)
T ss_pred CCCCEEEEECCCcccc--hhHHHHHHHHHhcCCCceEEEEcCCCH--------HHHHHHHHHhccCCCeEEEeccchHHH
Confidence 4567888889988731 334455555432 2456766665431 010111111 12355677998764 5
Q ss_pred hhhcccCCceeeccCchhHHHHhhcCCcEEec-cccCchhhhHHHHhhhhcceeEecccCHHHHHHHHHHHhcCch-hHH
Q 018483 242 VLANDAVGGFWSHCGWNSTLESICEGVPMLCK-PFFGDQNLNMRYVCDVWNVGLELEEFEGGTIKKAIKRLMVDTE-GKE 319 (355)
Q Consensus 242 ~L~~~~~~~~I~HgG~~s~~eal~~GvP~l~~-P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~l~~ai~~~l~~~~-~~~ 319 (355)
+++.+++ +|+..|..|+.||+++|+|+|+. |..++|..|+..+++ .|+|+... +.+++.++|.++++|++ .++
T Consensus 270 ~~~~aDl--~I~k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~-~G~g~~~~--~~~~l~~~i~~ll~~~~~~~~ 344 (391)
T PRK13608 270 WMASSQL--MITKPGGITISEGLARCIPMIFLNPAPGQELENALYFEE-KGFGKIAD--TPEEAIKIVASLTNGNEQLTN 344 (391)
T ss_pred HHHhhhE--EEeCCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHh-CCcEEEeC--CHHHHHHHHHHHhcCHHHHHH
Confidence 7888888 99999889999999999999998 777777899999988 69998763 78889999999998854 444
Q ss_pred HHHHHHHHHHHHhhhhhcCCChHHHHHHHHHHH
Q 018483 320 MRKKAIHLKEKVELPLKEGGSCYNSLNDLVKKI 352 (355)
Q Consensus 320 ~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~l 352 (355)
+++|+++++ +..+....++.+++.+
T Consensus 345 m~~~~~~~~--------~~~s~~~i~~~l~~l~ 369 (391)
T PRK13608 345 MISTMEQDK--------IKYATQTICRDLLDLI 369 (391)
T ss_pred HHHHHHHhc--------CCCCHHHHHHHHHHHh
Confidence 555554443 2344455555555544
No 41
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=98.95 E-value=7.9e-09 Score=96.62 Aligned_cols=75 Identities=24% Similarity=0.387 Sum_probs=65.0
Q ss_pred ChHhhhhcccCCceeeccCchhHHHHhhcCCcEEecccc---CchhhhHHHHhhhhcceeEec--ccCHHHHHHHHHHHh
Q 018483 238 PQKEVLANDAVGGFWSHCGWNSTLESICEGVPMLCKPFF---GDQNLNMRYVCDVWNVGLELE--EFEGGTIKKAIKRLM 312 (355)
Q Consensus 238 pq~~~L~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~---~DQ~~na~~~~~~~g~g~~l~--~~~~~~l~~ai~~~l 312 (355)
+-.++++.+++ +|+++|.++++||+++|+|+|+.|.. ++|..|+..+++ .|.|..++ +.+.+++.++|.+++
T Consensus 243 ~~~~~l~~ad~--~v~~~g~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~-~~~G~~~~~~~~~~~~l~~~i~~ll 319 (348)
T TIGR01133 243 NMAAAYAAADL--VISRAGASTVAELAAAGVPAILIPYPYAADDQYYNAKFLED-LGAGLVIRQKELLPEKLLEALLKLL 319 (348)
T ss_pred CHHHHHHhCCE--EEECCChhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHH-CCCEEEEecccCCHHHHHHHHHHHH
Confidence 44667888887 99999988999999999999999863 578889999987 69999887 568999999999999
Q ss_pred cCc
Q 018483 313 VDT 315 (355)
Q Consensus 313 ~~~ 315 (355)
+|+
T Consensus 320 ~~~ 322 (348)
T TIGR01133 320 LDP 322 (348)
T ss_pred cCH
Confidence 984
No 42
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.88 E-value=1.5e-06 Score=80.94 Aligned_cols=158 Identities=20% Similarity=0.203 Sum_probs=95.7
Q ss_pred CceEEEeeccccc-cCHHHHHHHHHHHHhC-CCCEEEEEcCCCcCCCCcccCCChhhhhhcCCCCceeecCChHh---hh
Q 018483 169 KSVIYVSFGSIAS-IDEKELLETAWGLANC-EQPFLWVVRPGLVRGSNCLELLPINFQDSVGERGCIVEWAPQKE---VL 243 (355)
Q Consensus 169 ~~~v~vs~GS~~~-~~~~~~~~~~~~l~~~-~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~pq~~---~L 243 (355)
++.+++..|+... ...+.+-+++..+.+. +..+++.-.+.. . ..+. ....++.+.+|+++.+ ++
T Consensus 196 ~~~~i~~~G~~~~~k~~~~~i~~~~~l~~~~~~~l~i~G~~~~-~---------~~~~-~~~~~v~~~g~~~~~~~~~~~ 264 (364)
T cd03814 196 DRPVLLYVGRLAPEKNLEALLDADLPLRRRPPVRLVIVGDGPA-R---------ARLE-ARYPNVHFLGFLDGEELAAAY 264 (364)
T ss_pred CCeEEEEEeccccccCHHHHHHHHHHhhhcCCceEEEEeCCch-H---------HHHh-ccCCcEEEEeccCHHHHHHHH
Confidence 3456677777654 2334444444444332 344444432211 0 1111 1234557789988765 67
Q ss_pred hcccCCceeeccC----chhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEecccCHHHHHHHHHHHhcCch-hH
Q 018483 244 ANDAVGGFWSHCG----WNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFEGGTIKKAIKRLMVDTE-GK 318 (355)
Q Consensus 244 ~~~~~~~~I~HgG----~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~l~~ai~~~l~~~~-~~ 318 (355)
..+++ +|..+. .++++||+++|+|+|+.+..+ +...+++ .+.|.....-+.+++.++|.+++.|++ ..
T Consensus 265 ~~~d~--~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~~----~~~~i~~-~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~ 337 (364)
T cd03814 265 ASADV--FVFPSRTETFGLVVLEAMASGLPVVAPDAGG----PADIVTD-GENGLLVEPGDAEAFAAALAALLADPELRR 337 (364)
T ss_pred HhCCE--EEECcccccCCcHHHHHHHcCCCEEEcCCCC----chhhhcC-CcceEEcCCCCHHHHHHHHHHHHcCHHHHH
Confidence 77777 776654 478999999999999987553 4556665 588888877788889999999999853 33
Q ss_pred HHHHHHHHHHHHHhhhhhcCCChHHHHHHHHHHH
Q 018483 319 EMRKKAIHLKEKVELPLKEGGSCYNSLNDLVKKI 352 (355)
Q Consensus 319 ~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~l 352 (355)
.+.+++++.. +.-+.....+++++.+
T Consensus 338 ~~~~~~~~~~--------~~~~~~~~~~~~~~~~ 363 (364)
T cd03814 338 RMAARARAEA--------ERRSWEAFLDNLLEAY 363 (364)
T ss_pred HHHHHHHHHH--------hhcCHHHHHHHHHHhh
Confidence 3333333332 1244555566665543
No 43
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=98.79 E-value=2.1e-08 Score=90.95 Aligned_cols=104 Identities=16% Similarity=0.119 Sum_probs=76.1
Q ss_pred CceEEEeeccccccCHHHHHHHHHHHHhC--CCCEEEEEcCCCcCCCCcccCCChhhhhh--cCCCCceeecCChH-hhh
Q 018483 169 KSVIYVSFGSIASIDEKELLETAWGLANC--EQPFLWVVRPGLVRGSNCLELLPINFQDS--VGERGCIVEWAPQK-EVL 243 (355)
Q Consensus 169 ~~~v~vs~GS~~~~~~~~~~~~~~~l~~~--~~~~i~~~~~~~~~~~~~~~~lp~~~~~~--~~~~~~~~~~~pq~-~~L 243 (355)
.+.|+|+||...... ....++++|.+. +.++.++++.... ..+.+.+. ...|+.+..+++++ .++
T Consensus 170 ~~~iLi~~GG~d~~~--~~~~~l~~l~~~~~~~~i~vv~G~~~~--------~~~~l~~~~~~~~~i~~~~~~~~m~~lm 239 (279)
T TIGR03590 170 LRRVLVSFGGADPDN--LTLKLLSALAESQINISITLVTGSSNP--------NLDELKKFAKEYPNIILFIDVENMAELM 239 (279)
T ss_pred cCeEEEEeCCcCCcC--HHHHHHHHHhccccCceEEEEECCCCc--------CHHHHHHHHHhCCCEEEEeCHHHHHHHH
Confidence 357899998655422 445566777653 4667788876421 11222221 13466788999986 688
Q ss_pred hcccCCceeeccCchhHHHHhhcCCcEEeccccCchhhhHHH
Q 018483 244 ANDAVGGFWSHCGWNSTLESICEGVPMLCKPFFGDQNLNMRY 285 (355)
Q Consensus 244 ~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~ 285 (355)
..+++ +||+|| +|++|++++|+|+|++|...+|..||+.
T Consensus 240 ~~aDl--~Is~~G-~T~~E~~a~g~P~i~i~~~~nQ~~~a~~ 278 (279)
T TIGR03590 240 NEADL--AIGAAG-STSWERCCLGLPSLAICLAENQQSNSQQ 278 (279)
T ss_pred HHCCE--EEECCc-hHHHHHHHcCCCEEEEEecccHHHHhhh
Confidence 88888 999999 9999999999999999999999999975
No 44
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=98.63 E-value=7.9e-07 Score=80.17 Aligned_cols=182 Identities=17% Similarity=0.118 Sum_probs=118.5
Q ss_pred cCcEEEEcCccccchHHHHHH-HHhhCCCceecCcccccCCCcCCCCCcccchhhHhhhccCCCceEEEeeccccccCHH
Q 018483 107 KCSALIVNTVDFLEQEALTKV-QELFSASAFTIGPFHKLVPTISGSLLKEDTNCISWLNKQAPKSVIYVSFGSIASIDEK 185 (355)
Q Consensus 107 ~~~~~l~nt~~~le~~~~~~~-r~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~ 185 (355)
..|.+++-..+.|-.+.-++. .+.....++++|-+....+. ...+.. . .+++--|+||-|-... ..+
T Consensus 167 ~yD~V~v~GdP~f~d~~~~~~~~~~i~~k~~ytG~vq~~~~~---~~~p~~-------~-~pE~~~Ilvs~GGG~d-G~e 234 (400)
T COG4671 167 FYDLVLVYGDPDFYDPLTEFPFAPAIRAKMRYTGFVQRSLPH---LPLPPH-------E-APEGFDILVSVGGGAD-GAE 234 (400)
T ss_pred hheEEEEecCccccChhhcCCccHhhhhheeEeEEeeccCcC---CCCCCc-------C-CCccceEEEecCCChh-hHH
Confidence 457788877776654311100 00111228999988221111 111111 1 1445568888776543 456
Q ss_pred HHHHHHHHHHh-CCCC--EEEEEcCCCcCCCCcccCCChhhhh----hcC--CCCceeecCCh-HhhhhcccCCceeecc
Q 018483 186 ELLETAWGLAN-CEQP--FLWVVRPGLVRGSNCLELLPINFQD----SVG--ERGCIVEWAPQ-KEVLANDAVGGFWSHC 255 (355)
Q Consensus 186 ~~~~~~~~l~~-~~~~--~i~~~~~~~~~~~~~~~~lp~~~~~----~~~--~~~~~~~~~pq-~~~L~~~~~~~~I~Hg 255 (355)
.+...+.|-.- .+.+ .+.+++.. .|....+ ..+ +++.+..|..+ ..++..++. +|+-|
T Consensus 235 Li~~~l~A~~~l~~l~~~~~ivtGP~----------MP~~~r~~l~~~A~~~p~i~I~~f~~~~~~ll~gA~~--vVSm~ 302 (400)
T COG4671 235 LIETALAAAQLLAGLNHKWLIVTGPF----------MPEAQRQKLLASAPKRPHISIFEFRNDFESLLAGARL--VVSMG 302 (400)
T ss_pred HHHHHHHHhhhCCCCCcceEEEeCCC----------CCHHHHHHHHHhcccCCCeEEEEhhhhHHHHHHhhhe--eeecc
Confidence 66666665543 3333 45555543 4443322 223 45567788776 457777777 99999
Q ss_pred CchhHHHHhhcCCcEEecccc---CchhhhHHHHhhhhcceeEec--ccCHHHHHHHHHHHhc
Q 018483 256 GWNSTLESICEGVPMLCKPFF---GDQNLNMRYVCDVWNVGLELE--EFEGGTIKKAIKRLMV 313 (355)
Q Consensus 256 G~~s~~eal~~GvP~l~~P~~---~DQ~~na~~~~~~~g~g~~l~--~~~~~~l~~ai~~~l~ 313 (355)
|.||++|-+.+|+|.|++|.. -+|..-|.|+++ +|+--.+. +++++.++++|...++
T Consensus 303 GYNTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~-LGL~dvL~pe~lt~~~La~al~~~l~ 364 (400)
T COG4671 303 GYNTVCEILSFGKPALIVPRAAPREEQLIRAQRLEE-LGLVDVLLPENLTPQNLADALKAALA 364 (400)
T ss_pred cchhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHh-cCcceeeCcccCChHHHHHHHHhccc
Confidence 999999999999999999985 489999999988 99987777 8999999999998887
No 45
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=98.51 E-value=5.5e-05 Score=73.83 Aligned_cols=140 Identities=17% Similarity=0.145 Sum_probs=86.2
Q ss_pred eEEEeeccccccCHHHHHHHHHHHHhC-CCCEEEEEcCCCcCCCCcccCCChhhhhhc-CCCCceeecCChHh---hhhc
Q 018483 171 VIYVSFGSIASIDEKELLETAWGLANC-EQPFLWVVRPGLVRGSNCLELLPINFQDSV-GERGCIVEWAPQKE---VLAN 245 (355)
Q Consensus 171 ~v~vs~GS~~~~~~~~~~~~~~~l~~~-~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~-~~~~~~~~~~pq~~---~L~~ 245 (355)
.+++..|+... .+.+..+++++.+. +.+++++ |.+. ..+.+.+.. ..++.+.+++++.+ +++.
T Consensus 264 ~~i~~vGrl~~--~K~~~~li~a~~~~~~~~l~iv-G~G~---------~~~~l~~~~~~~~V~f~G~v~~~ev~~~~~~ 331 (465)
T PLN02871 264 PLIVYVGRLGA--EKNLDFLKRVMERLPGARLAFV-GDGP---------YREELEKMFAGTPTVFTGMLQGDELSQAYAS 331 (465)
T ss_pred eEEEEeCCCch--hhhHHHHHHHHHhCCCcEEEEE-eCCh---------HHHHHHHHhccCCeEEeccCCHHHHHHHHHH
Confidence 44556677654 34456677777665 4555544 4321 111222111 13556779998654 6677
Q ss_pred ccCCceeeccC----chhHHHHhhcCCcEEeccccCchhhhHHHHhh--hhcceeEecccCHHHHHHHHHHHhcCch-hH
Q 018483 246 DAVGGFWSHCG----WNSTLESICEGVPMLCKPFFGDQNLNMRYVCD--VWNVGLELEEFEGGTIKKAIKRLMVDTE-GK 318 (355)
Q Consensus 246 ~~~~~~I~HgG----~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~--~~g~g~~l~~~~~~~l~~ai~~~l~~~~-~~ 318 (355)
+++ ||.-.. .++++||+++|+|+|+....+ ....+.+ .-+.|..++.-+.+++.++|.++++|++ ..
T Consensus 332 aDv--~V~pS~~E~~g~~vlEAmA~G~PVI~s~~gg----~~eiv~~~~~~~~G~lv~~~d~~~la~~i~~ll~~~~~~~ 405 (465)
T PLN02871 332 GDV--FVMPSESETLGFVVLEAMASGVPVVAARAGG----IPDIIPPDQEGKTGFLYTPGDVDDCVEKLETLLADPELRE 405 (465)
T ss_pred CCE--EEECCcccccCcHHHHHHHcCCCEEEcCCCC----cHhhhhcCCCCCceEEeCCCCHHHHHHHHHHHHhCHHHHH
Confidence 777 774332 357999999999999876432 2333332 1377888776678999999999998854 45
Q ss_pred HHHHHHHHHH
Q 018483 319 EMRKKAIHLK 328 (355)
Q Consensus 319 ~~~~~a~~l~ 328 (355)
.+.+++++..
T Consensus 406 ~~~~~a~~~~ 415 (465)
T PLN02871 406 RMGAAAREEV 415 (465)
T ss_pred HHHHHHHHHH
Confidence 5666665543
No 46
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=98.46 E-value=4.7e-05 Score=73.39 Aligned_cols=85 Identities=15% Similarity=0.239 Sum_probs=60.7
Q ss_pred hhhhcccCCceee----ccCchhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEecccCHHHHHHHHHHHhcCch
Q 018483 241 EVLANDAVGGFWS----HCGWNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFEGGTIKKAIKRLMVDTE 316 (355)
Q Consensus 241 ~~L~~~~~~~~I~----HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~l~~ai~~~l~~~~ 316 (355)
.+++.+++ +|+. -+|..+++||+++|+|+|+-|..+++......+.+ .|+++.. -+.+++.++|.++++|++
T Consensus 315 ~~y~~aDi-~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~-~g~~~~~--~d~~~La~~l~~ll~~~~ 390 (425)
T PRK05749 315 LLYAIADI-AFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERLLQ-AGAAIQV--EDAEDLAKAVTYLLTDPD 390 (425)
T ss_pred HHHHhCCE-EEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHHHH-CCCeEEE--CCHHHHHHHHHHHhcCHH
Confidence 45666775 1331 13445699999999999999988888877777755 4666553 467899999999999865
Q ss_pred -hHHHHHHHHHHHH
Q 018483 317 -GKEMRKKAIHLKE 329 (355)
Q Consensus 317 -~~~~~~~a~~l~~ 329 (355)
...+.+++++...
T Consensus 391 ~~~~m~~~a~~~~~ 404 (425)
T PRK05749 391 ARQAYGEAGVAFLK 404 (425)
T ss_pred HHHHHHHHHHHHHH
Confidence 5556666655543
No 47
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=98.40 E-value=0.00021 Score=66.29 Aligned_cols=148 Identities=18% Similarity=0.163 Sum_probs=85.8
Q ss_pred CceEEEeeccccc-cCHHHHHHHHHHHHh--CCCCEEEEEcCCCcCCCCcccCCChhhh-hhcCCCCceeecCChHh---
Q 018483 169 KSVIYVSFGSIAS-IDEKELLETAWGLAN--CEQPFLWVVRPGLVRGSNCLELLPINFQ-DSVGERGCIVEWAPQKE--- 241 (355)
Q Consensus 169 ~~~v~vs~GS~~~-~~~~~~~~~~~~l~~--~~~~~i~~~~~~~~~~~~~~~~lp~~~~-~~~~~~~~~~~~~pq~~--- 241 (355)
++.+++..|+... ...+.+-.++..+.+ .+.++++.-++.. ...+.+-.. ....+++.+.+++|+.+
T Consensus 201 ~~~~i~~~G~~~~~k~~~~l~~~~~~~~~~~~~~~l~i~G~~~~------~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~ 274 (374)
T cd03817 201 DEPVLLYVGRLAKEKNIDFLIRAFARLLKEEPDVKLVIVGDGPE------REELEELARELGLADRVIFTGFVPREELPD 274 (374)
T ss_pred CCeEEEEEeeeecccCHHHHHHHHHHHHHhCCCeEEEEEeCCch------HHHHHHHHHHcCCCCcEEEeccCChHHHHH
Confidence 4456667777664 233444444444443 3344544432211 000101000 01234567789998765
Q ss_pred hhhcccCCceeec----cCchhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEecccCHHHHHHHHHHHhcCch-
Q 018483 242 VLANDAVGGFWSH----CGWNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFEGGTIKKAIKRLMVDTE- 316 (355)
Q Consensus 242 ~L~~~~~~~~I~H----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~l~~ai~~~l~~~~- 316 (355)
++..+++ +|.- +..+++.||+++|+|+|+.+. ...+..+.+ .+.|..++.-+. ++.+++.+++++++
T Consensus 275 ~~~~ad~--~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~----~~~~~~i~~-~~~g~~~~~~~~-~~~~~i~~l~~~~~~ 346 (374)
T cd03817 275 YYKAADL--FVFASTTETQGLVLLEAMAAGLPVVAVDA----PGLPDLVAD-GENGFLFPPGDE-ALAEALLRLLQDPEL 346 (374)
T ss_pred HHHHcCE--EEecccccCcChHHHHHHHcCCcEEEeCC----CChhhheec-CceeEEeCCCCH-HHHHHHHHHHhChHH
Confidence 5777777 6533 334789999999999998653 334556655 477887763333 89999999999854
Q ss_pred hHHHHHHHHHHHHH
Q 018483 317 GKEMRKKAIHLKEK 330 (355)
Q Consensus 317 ~~~~~~~a~~l~~~ 330 (355)
...+++++++..+.
T Consensus 347 ~~~~~~~~~~~~~~ 360 (374)
T cd03817 347 RRRLSKNAEESAEK 360 (374)
T ss_pred HHHHHHHHHHHHHH
Confidence 33455555555443
No 48
>KOG3349 consensus Predicted glycosyltransferase [General function prediction only]
Probab=98.38 E-value=2.5e-06 Score=67.54 Aligned_cols=116 Identities=15% Similarity=0.096 Sum_probs=75.7
Q ss_pred ceEEEeeccccc--c-CHHHHHHHHHHHHhCCC-CEEEEEcCCCcCCCCcccCCChhhhhhcCCCCce---eecCCh-Hh
Q 018483 170 SVIYVSFGSIAS--I-DEKELLETAWGLANCEQ-PFLWVVRPGLVRGSNCLELLPINFQDSVGERGCI---VEWAPQ-KE 241 (355)
Q Consensus 170 ~~v~vs~GS~~~--~-~~~~~~~~~~~l~~~~~-~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~---~~~~pq-~~ 241 (355)
..+||+-||..- + .--.-++..+.|.+.|+ +.+..++.+... .++.........+.. .+|-|- .+
T Consensus 4 ~~vFVTVGtT~Fd~LI~~Vl~~~~~~~L~k~G~~kLiiQ~Grg~~~-------~~d~~~~~~k~~gl~id~y~f~psl~e 76 (170)
T KOG3349|consen 4 MTVFVTVGTTSFDDLISCVLSEEFLQELQKRGFTKLIIQIGRGQPF-------FGDPIDLIRKNGGLTIDGYDFSPSLTE 76 (170)
T ss_pred eEEEEEeccccHHHHHHHHcCHHHHHHHHHcCccEEEEEecCCccC-------CCCHHHhhcccCCeEEEEEecCccHHH
Confidence 479999999763 1 11122446677777775 677888876311 122221111112222 366675 45
Q ss_pred hhhcccCCceeeccCchhHHHHhhcCCcEEeccc----cCchhhhHHHHhhhhcceeE
Q 018483 242 VLANDAVGGFWSHCGWNSTLESICEGVPMLCKPF----FGDQNLNMRYVCDVWNVGLE 295 (355)
Q Consensus 242 ~L~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~----~~DQ~~na~~~~~~~g~g~~ 295 (355)
....+++ +|+|+|+||++|.+..|+|.|+++- -.+|..-|..+++ .|-=..
T Consensus 77 ~I~~Adl--VIsHAGaGS~letL~l~KPlivVvNd~LMDNHQ~ELA~qL~~-egyL~~ 131 (170)
T KOG3349|consen 77 DIRSADL--VISHAGAGSCLETLRLGKPLIVVVNDSLMDNHQLELAKQLAE-EGYLYY 131 (170)
T ss_pred HHhhccE--EEecCCcchHHHHHHcCCCEEEEeChHhhhhHHHHHHHHHHh-cCcEEE
Confidence 5666666 9999999999999999999999994 3688888988877 355433
No 49
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=98.35 E-value=7.7e-05 Score=70.66 Aligned_cols=92 Identities=16% Similarity=0.221 Sum_probs=65.7
Q ss_pred CCCceeecCChHh---hhhcccCCceeec----cCchhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEecccCH
Q 018483 229 ERGCIVEWAPQKE---VLANDAVGGFWSH----CGWNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFEG 301 (355)
Q Consensus 229 ~~~~~~~~~pq~~---~L~~~~~~~~I~H----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~ 301 (355)
+++.+.+|+|+.+ ++..+++ +++. |-..+++||+++|+|+|+-+.. .....+++ .+.|..++.-+.
T Consensus 283 ~~v~~~g~~~~~~~~~~~~~adi--~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~----~~~e~i~~-~~~g~~~~~~~~ 355 (398)
T cd03800 283 DRVDFPGRVSREDLPALYRAADV--FVNPALYEPFGLTALEAMACGLPVVATAVG----GPRDIVVD-GVTGLLVDPRDP 355 (398)
T ss_pred ceEEEeccCCHHHHHHHHHhCCE--EEecccccccCcHHHHHHhcCCCEEECCCC----CHHHHccC-CCCeEEeCCCCH
Confidence 4557789999865 4677776 6643 2236899999999999987643 35556665 478888876679
Q ss_pred HHHHHHHHHHhcCch-hHHHHHHHHHH
Q 018483 302 GTIKKAIKRLMVDTE-GKEMRKKAIHL 327 (355)
Q Consensus 302 ~~l~~ai~~~l~~~~-~~~~~~~a~~l 327 (355)
+++.++|.+++++++ ...+.+++++.
T Consensus 356 ~~l~~~i~~l~~~~~~~~~~~~~a~~~ 382 (398)
T cd03800 356 EALAAALRRLLTDPALRRRLSRAGLRR 382 (398)
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 999999999998853 33444444443
No 50
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=98.32 E-value=0.00075 Score=62.35 Aligned_cols=111 Identities=21% Similarity=0.148 Sum_probs=72.1
Q ss_pred CCCceeecCChHh---hhhcccCCcee----eccCchhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEecccCH
Q 018483 229 ERGCIVEWAPQKE---VLANDAVGGFW----SHCGWNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFEG 301 (355)
Q Consensus 229 ~~~~~~~~~pq~~---~L~~~~~~~~I----~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~ 301 (355)
+++.+.+++++.+ ++..+++ +| +-|..++++||+++|+|+|+-+.. .....+.+ .+.|..+..-+.
T Consensus 259 ~~v~~~g~~~~~~~~~~~~~ad~--~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~----~~~~~~~~-~~~g~~~~~~~~ 331 (377)
T cd03798 259 DRVTFLGAVPHEEVPAYYAAADV--FVLPSLREGFGLVLLEAMACGLPVVATDVG----GIPEIITD-GENGLLVPPGDP 331 (377)
T ss_pred ceEEEeCCCCHHHHHHHHHhcCe--eecchhhccCChHHHHHHhcCCCEEEecCC----ChHHHhcC-CcceeEECCCCH
Confidence 4557789998754 5667776 54 224567899999999999986643 34455655 466777777789
Q ss_pred HHHHHHHHHHhcCchhHHHHHHHHHHHHHHhhhhhcCCChHHHHHHHHHHHHc
Q 018483 302 GTIKKAIKRLMVDTEGKEMRKKAIHLKEKVELPLKEGGSCYNSLNDLVKKILS 354 (355)
Q Consensus 302 ~~l~~ai~~~l~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~l~~ 354 (355)
+++.++|.+++++++. +..++..+.+. +.-+.....+++.+.+++
T Consensus 332 ~~l~~~i~~~~~~~~~----~~~~~~~~~~~----~~~s~~~~~~~~~~~~~~ 376 (377)
T cd03798 332 EALAEAILRLLADPWL----RLGRAARRRVA----ERFSWENVAERLLELYRE 376 (377)
T ss_pred HHHHHHHHHHhcCcHH----HHhHHHHHHHH----HHhhHHHHHHHHHHHHhh
Confidence 9999999999988432 22222222222 223344556666666654
No 51
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=98.32 E-value=8.8e-05 Score=69.55 Aligned_cols=93 Identities=22% Similarity=0.208 Sum_probs=66.4
Q ss_pred CCCCceeecCChHh---hhhcccCCceeec----------cCchhHHHHhhcCCcEEeccccCchhhhHHHHhhhhccee
Q 018483 228 GERGCIVEWAPQKE---VLANDAVGGFWSH----------CGWNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGL 294 (355)
Q Consensus 228 ~~~~~~~~~~pq~~---~L~~~~~~~~I~H----------gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~ 294 (355)
.+++.+.+++|+.+ +++.+++ +|.- |-.+++.||+++|+|+|+-+.. .+...+.+ .+.|.
T Consensus 244 ~~~v~~~g~~~~~~l~~~~~~ad~--~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~----~~~e~i~~-~~~g~ 316 (367)
T cd05844 244 GGRVTFLGAQPHAEVRELMRRARI--FLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHG----GIPEAVED-GETGL 316 (367)
T ss_pred CCeEEECCCCCHHHHHHHHHhCCE--EEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCC----Cchhheec-CCeeE
Confidence 34556778888754 5777777 5532 2357999999999999987653 35666666 47888
Q ss_pred EecccCHHHHHHHHHHHhcCch-hHHHHHHHHHH
Q 018483 295 ELEEFEGGTIKKAIKRLMVDTE-GKEMRKKAIHL 327 (355)
Q Consensus 295 ~l~~~~~~~l~~ai~~~l~~~~-~~~~~~~a~~l 327 (355)
.++.-+.+++.++|.++++|++ ..++++++++.
T Consensus 317 ~~~~~d~~~l~~~i~~l~~~~~~~~~~~~~a~~~ 350 (367)
T cd05844 317 LVPEGDVAALAAALGRLLADPDLRARMGAAGRRR 350 (367)
T ss_pred EECCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 8777788999999999999854 33445554443
No 52
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=98.32 E-value=0.00019 Score=66.05 Aligned_cols=81 Identities=23% Similarity=0.290 Sum_probs=61.0
Q ss_pred CCCCceeecCChHh---hhhcccCCceee----ccCchhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEecccC
Q 018483 228 GERGCIVEWAPQKE---VLANDAVGGFWS----HCGWNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFE 300 (355)
Q Consensus 228 ~~~~~~~~~~pq~~---~L~~~~~~~~I~----HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~ 300 (355)
..++.+.+++++.+ ++..+++ +|. -|..+++.||+++|+|+|+.+. ......+.+ -+.|..++..+
T Consensus 255 ~~~v~~~g~~~~~~~~~~~~~~di--~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~----~~~~~~~~~-~~~g~~~~~~~ 327 (374)
T cd03801 255 GDRVTFLGFVPDEDLPALYAAADV--FVLPSLYEGFGLVLLEAMAAGLPVVASDV----GGIPEVVED-GETGLLVPPGD 327 (374)
T ss_pred CcceEEEeccChhhHHHHHHhcCE--EEecchhccccchHHHHHHcCCcEEEeCC----CChhHHhcC-CcceEEeCCCC
Confidence 35567789997543 6777777 553 3456799999999999998765 345566654 37788777677
Q ss_pred HHHHHHHHHHHhcCc
Q 018483 301 GGTIKKAIKRLMVDT 315 (355)
Q Consensus 301 ~~~l~~ai~~~l~~~ 315 (355)
.+++.++|.++++++
T Consensus 328 ~~~l~~~i~~~~~~~ 342 (374)
T cd03801 328 PEALAEAILRLLDDP 342 (374)
T ss_pred HHHHHHHHHHHHcCh
Confidence 999999999999885
No 53
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=98.18 E-value=0.00089 Score=62.21 Aligned_cols=93 Identities=22% Similarity=0.305 Sum_probs=62.9
Q ss_pred CCCcee-ecCChH---hhhhcccCCcee--ec----cCchhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEecc
Q 018483 229 ERGCIV-EWAPQK---EVLANDAVGGFW--SH----CGWNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEE 298 (355)
Q Consensus 229 ~~~~~~-~~~pq~---~~L~~~~~~~~I--~H----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~ 298 (355)
+++.+. .|+|+. .++..+++ +| ++ |..++++||+++|+|+|+.+..+ ...+.. -+.|..+..
T Consensus 247 ~~v~~~~~~~~~~~~~~~~~~ad~--~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-----~~~i~~-~~~g~~~~~ 318 (366)
T cd03822 247 DRVIFINRYLPDEELPELFSAADV--VVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-----AEEVLD-GGTGLLVPP 318 (366)
T ss_pred CcEEEecCcCCHHHHHHHHhhcCE--EEecccccccccchHHHHHHHcCCCEEecCCCC-----hheeee-CCCcEEEcC
Confidence 445555 458865 46667776 55 22 33468999999999999977544 333444 367777776
Q ss_pred cCHHHHHHHHHHHhcCch-hHHHHHHHHHHHH
Q 018483 299 FEGGTIKKAIKRLMVDTE-GKEMRKKAIHLKE 329 (355)
Q Consensus 299 ~~~~~l~~ai~~~l~~~~-~~~~~~~a~~l~~ 329 (355)
-+.+++.+++.+++++++ ..++++++++..+
T Consensus 319 ~d~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~ 350 (366)
T cd03822 319 GDPAALAEAIRRLLADPELAQALRARAREYAR 350 (366)
T ss_pred CCHHHHHHHHHHHHcChHHHHHHHHHHHHHHh
Confidence 678999999999999843 4445555554443
No 54
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=98.15 E-value=0.00095 Score=63.72 Aligned_cols=93 Identities=18% Similarity=0.143 Sum_probs=65.7
Q ss_pred CCCceeecCChH---hhhhcccCCceee---ccC-chhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEecccCH
Q 018483 229 ERGCIVEWAPQK---EVLANDAVGGFWS---HCG-WNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFEG 301 (355)
Q Consensus 229 ~~~~~~~~~pq~---~~L~~~~~~~~I~---HgG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~ 301 (355)
+++.+.+++|+. .+++.+++ +|. +-| ..+++||+++|+|+|+.... .....+.+ -+.|..++.-+.
T Consensus 283 ~~v~~~g~~~~~~~~~~l~~ad~--~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~----~~~e~i~~-~~~g~~~~~~d~ 355 (405)
T TIGR03449 283 DRVRFLPPRPPEELVHVYRAADV--VAVPSYNESFGLVAMEAQACGTPVVAARVG----GLPVAVAD-GETGLLVDGHDP 355 (405)
T ss_pred ceEEECCCCCHHHHHHHHHhCCE--EEECCCCCCcChHHHHHHHcCCCEEEecCC----CcHhhhcc-CCceEECCCCCH
Confidence 456777888865 46778877 552 223 36899999999999996543 23445555 367877766788
Q ss_pred HHHHHHHHHHhcCch-hHHHHHHHHHHH
Q 018483 302 GTIKKAIKRLMVDTE-GKEMRKKAIHLK 328 (355)
Q Consensus 302 ~~l~~ai~~~l~~~~-~~~~~~~a~~l~ 328 (355)
+++.++|.+++++++ ...+++++++..
T Consensus 356 ~~la~~i~~~l~~~~~~~~~~~~~~~~~ 383 (405)
T TIGR03449 356 ADWADALARLLDDPRTRIRMGAAAVEHA 383 (405)
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 999999999998854 445556655543
No 55
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=98.13 E-value=9e-05 Score=68.60 Aligned_cols=134 Identities=19% Similarity=0.158 Sum_probs=81.0
Q ss_pred CCceEEEeeccccc-cCHHHHHHHHHHHHhCCCCEEEEEcCCCcCCCCcccCCChhhhhhcCCCCceeecCChHh---hh
Q 018483 168 PKSVIYVSFGSIAS-IDEKELLETAWGLANCEQPFLWVVRPGLVRGSNCLELLPINFQDSVGERGCIVEWAPQKE---VL 243 (355)
Q Consensus 168 ~~~~v~vs~GS~~~-~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~pq~~---~L 243 (355)
+++.+++..|+... ...+.+-+++..+.+.+.++++. +...... ..........++.+.+|+++.+ ++
T Consensus 189 ~~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~l~i~-G~~~~~~-------~~~~~~~~~~~v~~~g~~~~~~~~~~~ 260 (359)
T cd03823 189 GGRLRFGFIGQLTPHKGVDLLLEAFKRLPRGDIELVIV-GNGLELE-------EESYELEGDPRVEFLGAYPQEEIDDFY 260 (359)
T ss_pred CCceEEEEEecCccccCHHHHHHHHHHHHhcCcEEEEE-cCchhhh-------HHHHhhcCCCeEEEeCCCCHHHHHHHH
Confidence 45566777787654 22333333333333334555544 3321000 0000001234557789997654 57
Q ss_pred hcccCCceee----ccC-chhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEecccCHHHHHHHHHHHhcCch
Q 018483 244 ANDAVGGFWS----HCG-WNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFEGGTIKKAIKRLMVDTE 316 (355)
Q Consensus 244 ~~~~~~~~I~----HgG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~l~~ai~~~l~~~~ 316 (355)
+.+++ +|. ..| ..++.||+++|+|+|+.+. ..+...+.+ .+.|..+..-+.+++.+++.++++|++
T Consensus 261 ~~ad~--~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i~~-~~~g~~~~~~d~~~l~~~i~~l~~~~~ 331 (359)
T cd03823 261 AEIDV--LVVPSIWPENFPLVIREALAAGVPVIASDI----GGMAELVRD-GVNGLLFPPGDAEDLAAALERLIDDPD 331 (359)
T ss_pred HhCCE--EEEcCcccCCCChHHHHHHHCCCCEEECCC----CCHHHHhcC-CCcEEEECCCCHHHHHHHHHHHHhChH
Confidence 77777 663 233 3589999999999998654 345566655 357888876678999999999999853
No 56
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=98.07 E-value=0.00023 Score=66.32 Aligned_cols=217 Identities=15% Similarity=0.073 Sum_probs=123.8
Q ss_pred hccCcEEEEcCccccchHHHHHHHHhh-CCC-ceecCcccccCCCc-----------------------------CCCCC
Q 018483 105 VKKCSALIVNTVDFLEQEALTKVQELF-SAS-AFTIGPFHKLVPTI-----------------------------SGSLL 153 (355)
Q Consensus 105 ~~~~~~~l~nt~~~le~~~~~~~r~~~-~~~-v~~vGpl~~~~~~~-----------------------------~~~~~ 153 (355)
..+.|.+++=.+++|.-......+... +.| ++||.|-.---... -++++
T Consensus 74 ~~~pd~~i~iD~p~Fnl~lak~~k~~~~~i~viyyi~PqvWAWr~~R~~~i~k~~d~vl~ifPFE~~~yg~~~~~VGhPl 153 (347)
T PRK14089 74 AKQADKVLLMDSSSFNIPLAKKIKKAYPKKEIIYYILPQVWAWKKGRAKILEKYCDFLASILPFEVQFYQSKATYVGHPL 153 (347)
T ss_pred hcCCCEEEEeCCCCCCHHHHHHHHhcCCCCCEEEEECccceeeCcchHHHHHHHHhhhhccCCCCHHHhCCCCEEECCcH
Confidence 467888888888888887667777643 345 88888865321100 01111
Q ss_pred cccchhhHhhhccCCCceEEEeeccccccCHHHHHHHHHHHHhCC--CCEEEEEcCCCcCCCCcccCCChhhhhhcCC--
Q 018483 154 KEDTNCISWLNKQAPKSVIYVSFGSIASIDEKELLETAWGLANCE--QPFLWVVRPGLVRGSNCLELLPINFQDSVGE-- 229 (355)
Q Consensus 154 ~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~--~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~-- 229 (355)
-+. +...-+..+++++|.+--||...--...+..++++..... ..+.+...... . +.+.+...+
T Consensus 154 ~d~--~~~~~~~~~~~~~I~llPGSR~~Ei~~llP~~~~aa~~L~~~~~~~~i~~a~~---------~-~~i~~~~~~~~ 221 (347)
T PRK14089 154 LDE--IKEFKKDLDKEGTIAFMPGSRKSEIKRLMPIFKELAKKLEGKEKILVVPSFFK---------G-KDLKEIYGDIS 221 (347)
T ss_pred HHh--hhhhhhhcCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCcEEEEeCCCc---------H-HHHHHHHhcCC
Confidence 111 1100011123478999999988733345554444444322 12222222211 0 112111111
Q ss_pred CCceeecCChHhhhhcccCCceeeccCchhHHHHhhcCCcEEeccc--cCchhhhHHHHhh--hhcceeEe---------
Q 018483 230 RGCIVEWAPQKEVLANDAVGGFWSHCGWNSTLESICEGVPMLCKPF--FGDQNLNMRYVCD--VWNVGLEL--------- 296 (355)
Q Consensus 230 ~~~~~~~~pq~~~L~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~--~~DQ~~na~~~~~--~~g~g~~l--------- 296 (355)
...+.+ .-.+++..+++ .|+-+|..|+ |++.+|+|+|+ ++ ..-|+.||+++.+ ..|+...+
T Consensus 222 ~~~~~~--~~~~~m~~aDl--al~~SGT~TL-E~al~g~P~Vv-~Yk~~~lty~iak~lv~~~~igL~Nii~~~~~~~~v 295 (347)
T PRK14089 222 EFEISY--DTHKALLEAEF--AFICSGTATL-EAALIGTPFVL-AYKAKAIDYFIAKMFVKLKHIGLANIFFDFLGKEPL 295 (347)
T ss_pred CcEEec--cHHHHHHhhhH--HHhcCcHHHH-HHHHhCCCEEE-EEeCCHHHHHHHHHHHcCCeeehHHHhcCCCccccc
Confidence 111222 33567888887 9999999999 99999999999 55 3468889999872 14554444
Q ss_pred ----c--ccCHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHhhhhhcCCChHHHHHHH
Q 018483 297 ----E--EFEGGTIKKAIKRLMVDTEGKEMRKKAIHLKEKVELPLKEGGSCYNSLNDL 348 (355)
Q Consensus 297 ----~--~~~~~~l~~ai~~~l~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~ 348 (355)
- +.|++.|.+++.+ ... +++++...++.+.+. + +++....+.+
T Consensus 296 vPEllQ~~~t~~~la~~i~~-~~~---~~~~~~~~~l~~~l~----~-~a~~~~A~~i 344 (347)
T PRK14089 296 HPELLQEFVTVENLLKAYKE-MDR---EKFFKKSKELREYLK----H-GSAKNVAKIL 344 (347)
T ss_pred CchhhcccCCHHHHHHHHHH-HHH---HHHHHHHHHHHHHhc----C-CHHHHHHHHH
Confidence 1 6889999988877 212 456666666666553 3 5555554443
No 57
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=98.03 E-value=0.0015 Score=61.14 Aligned_cols=78 Identities=18% Similarity=0.298 Sum_probs=66.4
Q ss_pred eeeccCchhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEecccCHHHHHHHHHHHhcCch-hHHHHHHHHHHHH
Q 018483 251 FWSHCGWNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFEGGTIKKAIKRLMVDTE-GKEMRKKAIHLKE 329 (355)
Q Consensus 251 ~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~l~~ai~~~l~~~~-~~~~~~~a~~l~~ 329 (355)
|+-+||+| .+|++++|+|+|.=|+..-|..-++++.+ .|+|+.+++ .+.+.+++..+++|++ +..|.+++.++-+
T Consensus 327 lv~~GGHN-~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~~-~ga~~~v~~--~~~l~~~v~~l~~~~~~r~~~~~~~~~~v~ 402 (419)
T COG1519 327 LVPIGGHN-PLEPAAFGTPVIFGPYTFNFSDIAERLLQ-AGAGLQVED--ADLLAKAVELLLADEDKREAYGRAGLEFLA 402 (419)
T ss_pred ccCCCCCC-hhhHHHcCCCEEeCCccccHHHHHHHHHh-cCCeEEECC--HHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 46699998 78999999999999999999999999988 699999876 7889999988888865 6667777777666
Q ss_pred HHh
Q 018483 330 KVE 332 (355)
Q Consensus 330 ~~~ 332 (355)
..+
T Consensus 403 ~~~ 405 (419)
T COG1519 403 QNR 405 (419)
T ss_pred Hhh
Confidence 665
No 58
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.02 E-value=6.4e-05 Score=69.95 Aligned_cols=149 Identities=19% Similarity=0.097 Sum_probs=89.1
Q ss_pred CceEEEeeccccccCHHHHHHHHHHHHhCC-CCEEEEEcCCCcCCCCcccCCChhh-hhhcCCCCceeecCChHh---hh
Q 018483 169 KSVIYVSFGSIASIDEKELLETAWGLANCE-QPFLWVVRPGLVRGSNCLELLPINF-QDSVGERGCIVEWAPQKE---VL 243 (355)
Q Consensus 169 ~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~-~~~i~~~~~~~~~~~~~~~~lp~~~-~~~~~~~~~~~~~~pq~~---~L 243 (355)
+..+++..|+... .+....+++++.+.. ..+++.-.+.. . ..+.+-. ......|+.+.+|+|+.+ ++
T Consensus 190 ~~~~i~~~G~~~~--~K~~~~li~a~~~l~~~~l~i~G~g~~--~----~~~~~~~~~~~~~~~V~~~g~v~~~~~~~~~ 261 (357)
T cd03795 190 GRPFFLFVGRLVY--YKGLDVLLEAAAALPDAPLVIVGEGPL--E----AELEALAAALGLLDRVRFLGRLDDEEKAALL 261 (357)
T ss_pred CCcEEEEeccccc--ccCHHHHHHHHHhccCcEEEEEeCChh--H----HHHHHHHHhcCCcceEEEcCCCCHHHHHHHH
Confidence 3456667777653 334556677776665 44444432211 0 0011111 011235667889999754 66
Q ss_pred hcccCCceeec---cC-chhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEecccCHHHHHHHHHHHhcCch-hH
Q 018483 244 ANDAVGGFWSH---CG-WNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFEGGTIKKAIKRLMVDTE-GK 318 (355)
Q Consensus 244 ~~~~~~~~I~H---gG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~l~~ai~~~l~~~~-~~ 318 (355)
+.+++.++-++ .| ..++.||+++|+|+|+....+....... . -+.|...+.-+.+++.++|.++++|++ ..
T Consensus 262 ~~ad~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~---~-~~~g~~~~~~d~~~~~~~i~~l~~~~~~~~ 337 (357)
T cd03795 262 AACDVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNL---H-GVTGLVVPPGDPAALAEAIRRLLEDPELRE 337 (357)
T ss_pred HhCCEEEeCCcccccccchHHHHHHHcCCCEEecCCCCchhHHhh---C-CCceEEeCCCCHHHHHHHHHHHHHCHHHHH
Confidence 66777333332 33 3579999999999999765544432222 2 267777766789999999999999864 45
Q ss_pred HHHHHHHHHHH
Q 018483 319 EMRKKAIHLKE 329 (355)
Q Consensus 319 ~~~~~a~~l~~ 329 (355)
++++++++..+
T Consensus 338 ~~~~~~~~~~~ 348 (357)
T cd03795 338 RLGEAARERAE 348 (357)
T ss_pred HHHHHHHHHHH
Confidence 55666555443
No 59
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=98.02 E-value=0.00033 Score=65.51 Aligned_cols=136 Identities=15% Similarity=0.156 Sum_probs=87.7
Q ss_pred EEeeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCcCCCCcccCCChhhhhhcCCCCceeecCChH---hhhhcccCC
Q 018483 173 YVSFGSIASIDEKELLETAWGLANCEQPFLWVVRPGLVRGSNCLELLPINFQDSVGERGCIVEWAPQK---EVLANDAVG 249 (355)
Q Consensus 173 ~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~pq~---~~L~~~~~~ 249 (355)
++..|.... .+....+++++.+.+.+++++-.+.. .+.+.+...+|+.+.+++|+. .+++.+++-
T Consensus 198 il~~G~~~~--~K~~~~li~a~~~~~~~l~ivG~g~~----------~~~l~~~~~~~V~~~g~~~~~~~~~~~~~ad~~ 265 (351)
T cd03804 198 YLSVGRLVP--YKRIDLAIEAFNKLGKRLVVIGDGPE----------LDRLRAKAGPNVTFLGRVSDEELRDLYARARAF 265 (351)
T ss_pred EEEEEcCcc--ccChHHHHHHHHHCCCcEEEEECChh----------HHHHHhhcCCCEEEecCCCHHHHHHHHHhCCEE
Confidence 445566653 34566678888877777665543321 122222335667888999985 467788873
Q ss_pred ceeeccCc-hhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEecccCHHHHHHHHHHHhcCc-h-hHHHHHHHH
Q 018483 250 GFWSHCGW-NSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFEGGTIKKAIKRLMVDT-E-GKEMRKKAI 325 (355)
Q Consensus 250 ~~I~HgG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~l~~ai~~~l~~~-~-~~~~~~~a~ 325 (355)
++-+.-|. .++.||+++|+|+|+....+ ....+.+ -+.|..++.-+.+++.++|.++++|+ + ++.++++++
T Consensus 266 v~ps~e~~g~~~~Eama~G~Pvi~~~~~~----~~e~i~~-~~~G~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~ 339 (351)
T cd03804 266 LFPAEEDFGIVPVEAMASGTPVIAYGKGG----ALETVID-GVTGILFEEQTVESLAAAVERFEKNEDFDPQAIRAHAE 339 (351)
T ss_pred EECCcCCCCchHHHHHHcCCCEEEeCCCC----CcceeeC-CCCEEEeCCCCHHHHHHHHHHHHhCcccCHHHHHHHHH
Confidence 33234343 46789999999999986433 3344555 36788887668899999999999886 2 444444443
No 60
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=97.98 E-value=9.8e-05 Score=68.85 Aligned_cols=149 Identities=22% Similarity=0.161 Sum_probs=86.4
Q ss_pred CCceEEEeeccccc-cCHHHHHHHHHHHHhC-CCCEEEEEcCCCcCCCCcccCCChhhhhhcCCCCceeecCChHh---h
Q 018483 168 PKSVIYVSFGSIAS-IDEKELLETAWGLANC-EQPFLWVVRPGLVRGSNCLELLPINFQDSVGERGCIVEWAPQKE---V 242 (355)
Q Consensus 168 ~~~~v~vs~GS~~~-~~~~~~~~~~~~l~~~-~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~pq~~---~ 242 (355)
.++.+++..|+... ...+.+-+.+..+.+. +.++++ ++.+.. ...+.+.+......++.+.+++++.+ +
T Consensus 218 ~~~~~i~~~G~~~~~k~~~~l~~~~~~l~~~~~~~l~i-~G~~~~-----~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~ 291 (394)
T cd03794 218 DDKFVVLYAGNIGRAQGLDTLLEAAALLKDRPDIRFLI-VGDGPE-----KEELKELAKALGLDNVTFLGRVPKEELPEL 291 (394)
T ss_pred CCcEEEEEecCcccccCHHHHHHHHHHHhhcCCeEEEE-eCCccc-----HHHHHHHHHHcCCCcEEEeCCCChHHHHHH
Confidence 35567777787765 2334444444444443 444443 443210 00011101111224567778988654 5
Q ss_pred hhcccCCceeeccC---------chhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEecccCHHHHHHHHHHHhc
Q 018483 243 LANDAVGGFWSHCG---------WNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFEGGTIKKAIKRLMV 313 (355)
Q Consensus 243 L~~~~~~~~I~HgG---------~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~l~~ai~~~l~ 313 (355)
+..+++ +|.... .+++.||+++|+|+|+.+..+.+. .+.+ .+.|..+..-+.+++.++|.++++
T Consensus 292 ~~~~di--~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~----~~~~-~~~g~~~~~~~~~~l~~~i~~~~~ 364 (394)
T cd03794 292 LAAADV--GLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAE----LVEE-AGAGLVVPPGDPEALAAAILELLD 364 (394)
T ss_pred HHhhCe--eEEeccCcccccccCchHHHHHHHCCCcEEEecCCCchh----hhcc-CCcceEeCCCCHHHHHHHHHHHHh
Confidence 677777 553222 344799999999999988765433 3333 266777765688999999999998
Q ss_pred Cch-hHHHHHHHHHHHH
Q 018483 314 DTE-GKEMRKKAIHLKE 329 (355)
Q Consensus 314 ~~~-~~~~~~~a~~l~~ 329 (355)
|++ ..++++++++...
T Consensus 365 ~~~~~~~~~~~~~~~~~ 381 (394)
T cd03794 365 DPEERAEMGENGRRYVE 381 (394)
T ss_pred ChHHHHHHHHHHHHHHH
Confidence 854 4445555544443
No 61
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=97.97 E-value=0.00026 Score=67.84 Aligned_cols=109 Identities=17% Similarity=0.157 Sum_probs=73.1
Q ss_pred CCCceeecCChHh---hhhcccCCceeeccC----chhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEec-ccC
Q 018483 229 ERGCIVEWAPQKE---VLANDAVGGFWSHCG----WNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELE-EFE 300 (355)
Q Consensus 229 ~~~~~~~~~pq~~---~L~~~~~~~~I~HgG----~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~-~~~ 300 (355)
+++.+.+|+++.+ ++..+++.+||...- .++++||+++|+|+|+-.. ......+.+ -+.|..+. .-+
T Consensus 289 ~~V~f~G~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~v----gg~~e~i~~-~~~G~l~~~~~~ 363 (407)
T cd04946 289 ISVNFTGELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNV----GGTPEIVDN-GGNGLLLSKDPT 363 (407)
T ss_pred ceEEEecCCChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCC----CCcHHHhcC-CCcEEEeCCCCC
Confidence 3456779999765 444455555765443 4689999999999998653 335566655 34888887 568
Q ss_pred HHHHHHHHHHHhcCch-hHHHHHHHHHHHHHHhhhhhcCCChHHHHHHHH
Q 018483 301 GGTIKKAIKRLMVDTE-GKEMRKKAIHLKEKVELPLKEGGSCYNSLNDLV 349 (355)
Q Consensus 301 ~~~l~~ai~~~l~~~~-~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~ 349 (355)
.+++.++|.++++|++ ...++++|++..+ +.-+...+.++|+
T Consensus 364 ~~~la~~I~~ll~~~~~~~~m~~~ar~~~~-------~~f~~~~~~~~~~ 406 (407)
T cd04946 364 PNELVSSLSKFIDNEEEYQTMREKAREKWE-------ENFNASKNYREFA 406 (407)
T ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHHH-------HHcCHHHhHHHhc
Confidence 9999999999998854 4445555444432 3444555555543
No 62
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=97.93 E-value=0.00093 Score=63.72 Aligned_cols=95 Identities=18% Similarity=0.187 Sum_probs=65.3
Q ss_pred CCCceeecCChHh---hhhcccCCceeec-cC-chhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEecccCHHH
Q 018483 229 ERGCIVEWAPQKE---VLANDAVGGFWSH-CG-WNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFEGGT 303 (355)
Q Consensus 229 ~~~~~~~~~pq~~---~L~~~~~~~~I~H-gG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~ 303 (355)
+++.+.+++|+.+ +++.+++-++.+. .| ..+++||+++|+|+|+.. .......+.. -..|..++.-+.++
T Consensus 281 ~~V~f~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~PVIas~----~~g~~e~i~~-~~~G~lv~~~d~~~ 355 (396)
T cd03818 281 SRVHFLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGCLVVGSD----TAPVREVITD-GENGLLVDFFDPDA 355 (396)
T ss_pred ceEEEeCCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCCCCEEEcC----CCCchhhccc-CCceEEcCCCCHHH
Confidence 4667789999765 5667777333232 22 258999999999999864 3345566654 35677776677999
Q ss_pred HHHHHHHHhcCch-hHHHHHHHHHHH
Q 018483 304 IKKAIKRLMVDTE-GKEMRKKAIHLK 328 (355)
Q Consensus 304 l~~ai~~~l~~~~-~~~~~~~a~~l~ 328 (355)
+.++|.++++|++ ..++.+++++..
T Consensus 356 la~~i~~ll~~~~~~~~l~~~ar~~~ 381 (396)
T cd03818 356 LAAAVIELLDDPARRARLRRAARRTA 381 (396)
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 9999999999854 444555555443
No 63
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=97.87 E-value=0.00053 Score=65.71 Aligned_cols=114 Identities=17% Similarity=0.170 Sum_probs=78.0
Q ss_pred CCCCceeecCChHh---hhhcccCCceee--c-------cCc-hhHHHHhhcCCcEEeccccCchhhhHHHHhhhhccee
Q 018483 228 GERGCIVEWAPQKE---VLANDAVGGFWS--H-------CGW-NSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGL 294 (355)
Q Consensus 228 ~~~~~~~~~~pq~~---~L~~~~~~~~I~--H-------gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~ 294 (355)
.+++.+.+|+|+.+ ++..+++ ||. + -|. ++++||+++|+|+|+....+ ....+++ -..|.
T Consensus 278 ~~~V~~~G~~~~~el~~~l~~aDv--~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g----~~E~v~~-~~~G~ 350 (406)
T PRK15427 278 EDVVEMPGFKPSHEVKAMLDDADV--FLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSG----IPELVEA-DKSGW 350 (406)
T ss_pred CCeEEEeCCCCHHHHHHHHHhCCE--EEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCC----chhhhcC-CCceE
Confidence 35567789999865 5667776 653 2 244 67999999999999975432 3455654 35788
Q ss_pred EecccCHHHHHHHHHHHhc-Cch-hHHHHHHHHHHHHHHhhhhhcCCChHHHHHHHHHHHHcC
Q 018483 295 ELEEFEGGTIKKAIKRLMV-DTE-GKEMRKKAIHLKEKVELPLKEGGSCYNSLNDLVKKILSF 355 (355)
Q Consensus 295 ~l~~~~~~~l~~ai~~~l~-~~~-~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~l~~~ 355 (355)
.++.-+.+++.++|.++++ |++ ..++.+++++..+ +.-+.....+++.+.++++
T Consensus 351 lv~~~d~~~la~ai~~l~~~d~~~~~~~~~~ar~~v~-------~~f~~~~~~~~l~~~~~~~ 406 (406)
T PRK15427 351 LVPENDAQALAQRLAAFSQLDTDELAPVVKRAREKVE-------TDFNQQVINRELASLLQAL 406 (406)
T ss_pred EeCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH-------HhcCHHHHHHHHHHHHhhC
Confidence 7777789999999999998 753 3344444443322 3455677778887777654
No 64
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=97.86 E-value=0.001 Score=65.58 Aligned_cols=192 Identities=12% Similarity=0.163 Sum_probs=99.4
Q ss_pred cchHHHHHHHHhhCCCceecC-cccccCCCcCCCCCcccchhhHhhhccCCCceEEEeeccccccCHHHHHHHHHHHH--
Q 018483 119 LEQEALTKVQELFSASAFTIG-PFHKLVPTISGSLLKEDTNCISWLNKQAPKSVIYVSFGSIASIDEKELLETAWGLA-- 195 (355)
Q Consensus 119 le~~~~~~~r~~~~~~v~~vG-pl~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~~l~-- 195 (355)
||.++. ++ .+.++.+|| |+....+. .+...+..+-+...+++++|-+--||-..--...+..++++..
T Consensus 371 FE~~~y---~~-~gv~v~yVGHPL~d~i~~-----~~~~~~~r~~lgl~~~~~iIaLLPGSR~~EI~rllPv~l~aa~~~ 441 (608)
T PRK01021 371 FEQNLF---KD-SPLRTVYLGHPLVETISS-----FSPNLSWKEQLHLPSDKPIVAAFPGSRRGDILRNLTIQVQAFLAS 441 (608)
T ss_pred cCHHHH---Hh-cCCCeEEECCcHHhhccc-----CCCHHHHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHH
Confidence 666543 33 467899999 77654321 1111112233333346789999999977633444555555554
Q ss_pred h--CCCCEEEEEcCCCcCCCCcccCCChhhhhhcCC-C---CceeecCChHhhhhcccCCceeeccCchhHHHHhhcCCc
Q 018483 196 N--CEQPFLWVVRPGLVRGSNCLELLPINFQDSVGE-R---GCIVEWAPQKEVLANDAVGGFWSHCGWNSTLESICEGVP 269 (355)
Q Consensus 196 ~--~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~-~---~~~~~~~pq~~~L~~~~~~~~I~HgG~~s~~eal~~GvP 269 (355)
. .+.+|+....... ..+.+++...+ . ..+..--...++++.+++ .+.-+|. .++|+..+|+|
T Consensus 442 ~l~~~l~fvvp~a~~~---------~~~~i~~~~~~~~~~~~~ii~~~~~~~~m~aaD~--aLaaSGT-aTLEaAL~g~P 509 (608)
T PRK01021 442 SLASTHQLLVSSANPK---------YDHLILEVLQQEGCLHSHIVPSQFRYELMRECDC--ALAKCGT-IVLETALNQTP 509 (608)
T ss_pred HhccCeEEEEecCchh---------hHHHHHHHHhhcCCCCeEEecCcchHHHHHhcCe--eeecCCH-HHHHHHHhCCC
Confidence 2 2345544322110 00111111111 1 112110012567888887 7776775 57899999999
Q ss_pred EEeccccC-chhhhHHHHhh-----------hhcceeEec------ccCHHHHHHHHHHHhcCch-hHHHHHHHHHHHHH
Q 018483 270 MLCKPFFG-DQNLNMRYVCD-----------VWNVGLELE------EFEGGTIKKAIKRLMVDTE-GKEMRKKAIHLKEK 330 (355)
Q Consensus 270 ~l~~P~~~-DQ~~na~~~~~-----------~~g~g~~l~------~~~~~~l~~ai~~~l~~~~-~~~~~~~a~~l~~~ 330 (355)
|+++=-.. =-+.-++++.+ -+|-.+..+ +.|++.|.+++ ++|.|++ .+++++..+++.+.
T Consensus 510 mVV~YK~s~Lty~Iak~Lvki~i~yIsLpNIIagr~VvPEllqgQ~~~tpe~La~~l-~lL~d~~~r~~~~~~l~~lr~~ 588 (608)
T PRK01021 510 TIVTCQLRPFDTFLAKYIFKIILPAYSLPNIILGSTIFPEFIGGKKDFQPEEVAAAL-DILKTSQSKEKQKDACRDLYQA 588 (608)
T ss_pred EEEEEecCHHHHHHHHHHHhccCCeeehhHHhcCCCcchhhcCCcccCCHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHH
Confidence 99953211 11222444433 011111111 46799999997 8888843 44555555555554
Q ss_pred Hh
Q 018483 331 VE 332 (355)
Q Consensus 331 ~~ 332 (355)
+.
T Consensus 589 Lg 590 (608)
T PRK01021 589 MN 590 (608)
T ss_pred hc
Confidence 43
No 65
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=97.85 E-value=0.00052 Score=64.42 Aligned_cols=203 Identities=19% Similarity=0.149 Sum_probs=108.3
Q ss_pred cchHHHHHHHHhhCCCceecC-cccccCCCcCCCCCcccchhhHhhhccCCCceEEEeeccccccCHHHHHHHHHHHH--
Q 018483 119 LEQEALTKVQELFSASAFTIG-PFHKLVPTISGSLLKEDTNCISWLNKQAPKSVIYVSFGSIASIDEKELLETAWGLA-- 195 (355)
Q Consensus 119 le~~~~~~~r~~~~~~v~~vG-pl~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~~l~-- 195 (355)
||.++. +. .+.++.+|| |+...... ........+.+ -.+++++|-+--||-..--...+..++++..
T Consensus 143 FE~~~y---~~-~g~~~~~VGHPl~d~~~~-----~~~~~~~~~~~-l~~~~~iIaLLPGSR~~EI~rllP~~l~aa~~l 212 (373)
T PF02684_consen 143 FEPEFY---KK-HGVPVTYVGHPLLDEVKP-----EPDRAEAREKL-LDPDKPIIALLPGSRKSEIKRLLPIFLEAAKLL 212 (373)
T ss_pred ccHHHH---hc-cCCCeEEECCcchhhhcc-----CCCHHHHHHhc-CCCCCcEEEEeCCCCHHHHHHHHHHHHHHHHHH
Confidence 665532 33 457799999 77665432 11111122222 2256889999999977622333344444433
Q ss_pred -hC--CCCEEEEEcCCCcCCCCcccCCChhhhhhcCCCCcee-ecCChHhhhhcccCCceeeccCchhHHHHhhcCCcEE
Q 018483 196 -NC--EQPFLWVVRPGLVRGSNCLELLPINFQDSVGERGCIV-EWAPQKEVLANDAVGGFWSHCGWNSTLESICEGVPML 271 (355)
Q Consensus 196 -~~--~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~-~~~pq~~~L~~~~~~~~I~HgG~~s~~eal~~GvP~l 271 (355)
+. +.+|++..-... ....-.........+..+. ..-.-.+++..+++ .+.-+| +.++|+...|+|||
T Consensus 213 ~~~~p~l~fvvp~a~~~------~~~~i~~~~~~~~~~~~~~~~~~~~~~~m~~ad~--al~~SG-TaTLE~Al~g~P~V 283 (373)
T PF02684_consen 213 KKQRPDLQFVVPVAPEV------HEELIEEILAEYPPDVSIVIIEGESYDAMAAADA--ALAASG-TATLEAALLGVPMV 283 (373)
T ss_pred HHhCCCeEEEEecCCHH------HHHHHHHHHHhhCCCCeEEEcCCchHHHHHhCcc--hhhcCC-HHHHHHHHhCCCEE
Confidence 32 455555443211 0000000111111112222 22245567888887 555555 46789999999999
Q ss_pred eccccC-chhhhHHHHhhhhcc-e---------eEec----ccCHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHhhhhh
Q 018483 272 CKPFFG-DQNLNMRYVCDVWNV-G---------LELE----EFEGGTIKKAIKRLMVDTEGKEMRKKAIHLKEKVELPLK 336 (355)
Q Consensus 272 ~~P~~~-DQ~~na~~~~~~~g~-g---------~~l~----~~~~~~l~~ai~~~l~~~~~~~~~~~a~~l~~~~~~a~~ 336 (355)
++=-.. =-+.-|+++.+ ... | +.-. +.|++.+.+++.++++|+ ..++..+...+.+++..+
T Consensus 284 v~Yk~~~lt~~iak~lvk-~~~isL~Niia~~~v~PEliQ~~~~~~~i~~~~~~ll~~~---~~~~~~~~~~~~~~~~~~ 359 (373)
T PF02684_consen 284 VAYKVSPLTYFIAKRLVK-VKYISLPNIIAGREVVPELIQEDATPENIAAELLELLENP---EKRKKQKELFREIRQLLG 359 (373)
T ss_pred EEEcCcHHHHHHHHHhhc-CCEeechhhhcCCCcchhhhcccCCHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHhhh
Confidence 863221 12333455533 221 1 1111 589999999999999994 445565666666666555
Q ss_pred cCCChHHH
Q 018483 337 EGGSCYNS 344 (355)
Q Consensus 337 ~~g~~~~~ 344 (355)
.+.++...
T Consensus 360 ~~~~~~~~ 367 (373)
T PF02684_consen 360 PGASSRAA 367 (373)
T ss_pred hccCCHHH
Confidence 66665553
No 66
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=97.82 E-value=0.00026 Score=62.37 Aligned_cols=141 Identities=16% Similarity=0.098 Sum_probs=99.8
Q ss_pred CceEEEeeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCcCCCCcccCCChhhhhhc--CCCCceeecCChH-hhhhc
Q 018483 169 KSVIYVSFGSIASIDEKELLETAWGLANCEQPFLWVVRPGLVRGSNCLELLPINFQDSV--GERGCIVEWAPQK-EVLAN 245 (355)
Q Consensus 169 ~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~--~~~~~~~~~~pq~-~~L~~ 245 (355)
..-|+|++|-.- +....-+++..|.+.++.+-.+++... .-+++.+.+. .+|..+......+ .++..
T Consensus 158 ~r~ilI~lGGsD--pk~lt~kvl~~L~~~~~nl~iV~gs~~--------p~l~~l~k~~~~~~~i~~~~~~~dma~LMke 227 (318)
T COG3980 158 KRDILITLGGSD--PKNLTLKVLAELEQKNVNLHIVVGSSN--------PTLKNLRKRAEKYPNINLYIDTNDMAELMKE 227 (318)
T ss_pred hheEEEEccCCC--hhhhHHHHHHHhhccCeeEEEEecCCC--------cchhHHHHHHhhCCCeeeEecchhHHHHHHh
Confidence 345889988543 344667788888888877666776321 1223333332 2444444444433 47777
Q ss_pred ccCCceeeccCchhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEec-ccCHHHHHHHHHHHhcCchhHHHHHHH
Q 018483 246 DAVGGFWSHCGWNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELE-EFEGGTIKKAIKRLMVDTEGKEMRKKA 324 (355)
Q Consensus 246 ~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~-~~~~~~l~~ai~~~l~~~~~~~~~~~a 324 (355)
+++ .|+-||. |++|++..|+|.+++|+...|..-|...+. +|+-..+. .++.+.....+.++++| ...|++.
T Consensus 228 ~d~--aI~AaGs-tlyEa~~lgvP~l~l~~a~NQ~~~a~~f~~-lg~~~~l~~~l~~~~~~~~~~~i~~d---~~~rk~l 300 (318)
T COG3980 228 ADL--AISAAGS-TLYEALLLGVPSLVLPLAENQIATAKEFEA-LGIIKQLGYHLKDLAKDYEILQIQKD---YARRKNL 300 (318)
T ss_pred cch--heeccch-HHHHHHHhcCCceEEeeeccHHHHHHHHHh-cCchhhccCCCchHHHHHHHHHhhhC---HHHhhhh
Confidence 887 8887775 899999999999999999999999999987 78888777 78888888888888888 4555554
Q ss_pred HH
Q 018483 325 IH 326 (355)
Q Consensus 325 ~~ 326 (355)
-.
T Consensus 301 ~~ 302 (318)
T COG3980 301 SF 302 (318)
T ss_pred hh
Confidence 33
No 67
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=97.80 E-value=0.00058 Score=64.07 Aligned_cols=112 Identities=14% Similarity=0.071 Sum_probs=73.8
Q ss_pred CCCceeecCCh-HhhhhcccCCcee----eccCchhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEecccCHHH
Q 018483 229 ERGCIVEWAPQ-KEVLANDAVGGFW----SHCGWNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFEGGT 303 (355)
Q Consensus 229 ~~~~~~~~~pq-~~~L~~~~~~~~I----~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~ 303 (355)
+++.+.++.++ ..+++.+++ +| +-|...++.||+++|+|+|+... ...+..+++ -..|..++.-+.++
T Consensus 253 ~~v~~~g~~~~~~~~~~~~d~--~v~ps~~E~~~~~~~EAma~g~PvI~s~~----~~~~e~i~~-~~~G~~~~~~~~~~ 325 (371)
T cd04962 253 DDVLFLGKQDHVEELLSIADL--FLLPSEKESFGLAALEAMACGVPVVASNA----GGIPEVVKH-GETGFLVDVGDVEA 325 (371)
T ss_pred ceEEEecCcccHHHHHHhcCE--EEeCCCcCCCccHHHHHHHcCCCEEEeCC----CCchhhhcC-CCceEEcCCCCHHH
Confidence 44566677665 457777777 55 22334699999999999999644 345566655 35777666667899
Q ss_pred HHHHHHHHhcCch-hHHHHHHHHHHHHHHhhhhhcCCChHHHHHHHHHHHHc
Q 018483 304 IKKAIKRLMVDTE-GKEMRKKAIHLKEKVELPLKEGGSCYNSLNDLVKKILS 354 (355)
Q Consensus 304 l~~ai~~~l~~~~-~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~l~~ 354 (355)
+.++|.+++++++ ..++++++++.. . +.-+.....+++.+.+++
T Consensus 326 l~~~i~~l~~~~~~~~~~~~~~~~~~---~----~~fs~~~~~~~~~~~y~~ 370 (371)
T cd04962 326 MAEYALSLLEDDELWQEFSRAARNRA---A----ERFDSERIVPQYEALYRR 370 (371)
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHH---H----HhCCHHHHHHHHHHHHHh
Confidence 9999999998854 445555555542 1 234455666666666554
No 68
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=97.80 E-value=0.00028 Score=58.74 Aligned_cols=147 Identities=21% Similarity=0.214 Sum_probs=85.9
Q ss_pred CCCceEEEeeccccc-cCHHHHHHHHHHHHh--CCCCEEEEEcCCCcCCCCcccCCChhhhh-hcCCCCceeecCCh---
Q 018483 167 APKSVIYVSFGSIAS-IDEKELLETAWGLAN--CEQPFLWVVRPGLVRGSNCLELLPINFQD-SVGERGCIVEWAPQ--- 239 (355)
Q Consensus 167 ~~~~~v~vs~GS~~~-~~~~~~~~~~~~l~~--~~~~~i~~~~~~~~~~~~~~~~lp~~~~~-~~~~~~~~~~~~pq--- 239 (355)
.+++.+++..|.... ...+.+-.++.-+.+ .+.-.++.++.... ...+-..+.. ....++.+.++.++
T Consensus 12 ~~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~l 86 (172)
T PF00534_consen 12 PDKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYKLVIVGDGEY-----KKELKNLIEKLNLKENIIFLGYVPDDEL 86 (172)
T ss_dssp -TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEEEEEESHCCH-----HHHHHHHHHHTTCGTTEEEEESHSHHHH
T ss_pred CCCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeEEEEEccccc-----cccccccccccccccccccccccccccc
Confidence 345667777888765 333333333333322 22224445542110 0001011111 12345577888873
Q ss_pred HhhhhcccCCceeec----cCchhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEecccCHHHHHHHHHHHhcCc
Q 018483 240 KEVLANDAVGGFWSH----CGWNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFEGGTIKKAIKRLMVDT 315 (355)
Q Consensus 240 ~~~L~~~~~~~~I~H----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~l~~ai~~~l~~~ 315 (355)
..++..+++ +|+. |..+++.||+++|+|+|+. |...+...+.+ .+.|..++.-+.+++.++|.++++++
T Consensus 87 ~~~~~~~di--~v~~s~~e~~~~~~~Ea~~~g~pvI~~----~~~~~~e~~~~-~~~g~~~~~~~~~~l~~~i~~~l~~~ 159 (172)
T PF00534_consen 87 DELYKSSDI--FVSPSRNEGFGLSLLEAMACGCPVIAS----DIGGNNEIIND-GVNGFLFDPNDIEELADAIEKLLNDP 159 (172)
T ss_dssp HHHHHHTSE--EEE-BSSBSS-HHHHHHHHTT-EEEEE----SSTHHHHHSGT-TTSEEEESTTSHHHHHHHHHHHHHHH
T ss_pred cccccccee--ccccccccccccccccccccccceeec----cccCCceeecc-ccceEEeCCCCHHHHHHHHHHHHCCH
Confidence 346777776 7665 5667999999999999974 45566677766 47799998559999999999999884
Q ss_pred h-hHHHHHHHH
Q 018483 316 E-GKEMRKKAI 325 (355)
Q Consensus 316 ~-~~~~~~~a~ 325 (355)
+ ...+.++++
T Consensus 160 ~~~~~l~~~~~ 170 (172)
T PF00534_consen 160 ELRQKLGKNAR 170 (172)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhc
Confidence 3 344444444
No 69
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=97.79 E-value=0.0014 Score=62.29 Aligned_cols=113 Identities=16% Similarity=0.170 Sum_probs=73.4
Q ss_pred CCCCceeecCChHh---hhhcccCCceeec----cCc-hhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEec-c
Q 018483 228 GERGCIVEWAPQKE---VLANDAVGGFWSH----CGW-NSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELE-E 298 (355)
Q Consensus 228 ~~~~~~~~~~pq~~---~L~~~~~~~~I~H----gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~-~ 298 (355)
..++.+.+++|+.+ +++.+++ +|.- -|. .+++||+++|+|+|+.... .+...+.+ -..|..+. .
T Consensus 256 ~~~v~~~G~~~~~~l~~~~~~aDv--~v~pS~~~E~f~~~~lEAma~G~PVI~s~~g----g~~Eiv~~-~~~G~~l~~~ 328 (380)
T PRK15484 256 GDRCIMLGGQPPEKMHNYYPLADL--VVVPSQVEEAFCMVAVEAMAAGKPVLASTKG----GITEFVLE-GITGYHLAEP 328 (380)
T ss_pred CCcEEEeCCCCHHHHHHHHHhCCE--EEeCCCCccccccHHHHHHHcCCCEEEeCCC----CcHhhccc-CCceEEEeCC
Confidence 34556778888654 5777777 6642 333 6789999999999997653 24455655 35787554 6
Q ss_pred cCHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHhhhhhcCCChHHHHHHHHHHHHc
Q 018483 299 FEGGTIKKAIKRLMVDTEGKEMRKKAIHLKEKVELPLKEGGSCYNSLNDLVKKILS 354 (355)
Q Consensus 299 ~~~~~l~~ai~~~l~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~l~~ 354 (355)
.+.+++.++|.++++|++..++.+++++ .+.+.-+-....+++.+.+++
T Consensus 329 ~d~~~la~~I~~ll~d~~~~~~~~~ar~-------~~~~~fsw~~~a~~~~~~l~~ 377 (380)
T PRK15484 329 MTSDSIISDINRTLADPELTQIAEQAKD-------FVFSKYSWEGVTQRFEEQIHN 377 (380)
T ss_pred CCHHHHHHHHHHHHcCHHHHHHHHHHHH-------HHHHhCCHHHHHHHHHHHHHH
Confidence 7899999999999998432223333322 222345556666666666653
No 70
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=97.76 E-value=0.00048 Score=64.02 Aligned_cols=91 Identities=23% Similarity=0.266 Sum_probs=63.2
Q ss_pred CCCceeecCChHh---hhhcccCCceee----------ccCchhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeE
Q 018483 229 ERGCIVEWAPQKE---VLANDAVGGFWS----------HCGWNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLE 295 (355)
Q Consensus 229 ~~~~~~~~~pq~~---~L~~~~~~~~I~----------HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~ 295 (355)
+++.+.+++|+.+ ++..+++ ++. -|.-++++||+++|+|+|+.+..+ ....+.+ ...|..
T Consensus 236 ~~v~~~g~~~~~~l~~~~~~adi--~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~----~~~~i~~-~~~g~~ 308 (355)
T cd03799 236 DRVTLLGAKSQEEVRELLRAADL--FVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSG----IPELVED-GETGLL 308 (355)
T ss_pred CeEEECCcCChHHHHHHHHhCCE--EEecceecCCCCccCccHHHHHHHHcCCCEEecCCCC----cchhhhC-CCceEE
Confidence 4567789998654 6667777 554 233479999999999999976432 2345544 347877
Q ss_pred ecccCHHHHHHHHHHHhcCch-hHHHHHHHHH
Q 018483 296 LEEFEGGTIKKAIKRLMVDTE-GKEMRKKAIH 326 (355)
Q Consensus 296 l~~~~~~~l~~ai~~~l~~~~-~~~~~~~a~~ 326 (355)
+..-+.+++.++|.+++++++ ..++++++++
T Consensus 309 ~~~~~~~~l~~~i~~~~~~~~~~~~~~~~a~~ 340 (355)
T cd03799 309 VPPGDPEALADAIERLLDDPELRREMGEAGRA 340 (355)
T ss_pred eCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 776689999999999998854 3344444443
No 71
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=97.72 E-value=0.00041 Score=65.40 Aligned_cols=135 Identities=17% Similarity=0.152 Sum_probs=79.2
Q ss_pred CceEEEeeccccccCHHHHHHHHHHHHhC-----CCCEEEEEcCCCcCCCCcccCCChhhhhh--cCCCCceeecCChH-
Q 018483 169 KSVIYVSFGSIASIDEKELLETAWGLANC-----EQPFLWVVRPGLVRGSNCLELLPINFQDS--VGERGCIVEWAPQK- 240 (355)
Q Consensus 169 ~~~v~vs~GS~~~~~~~~~~~~~~~l~~~-----~~~~i~~~~~~~~~~~~~~~~lp~~~~~~--~~~~~~~~~~~pq~- 240 (355)
+.+++++++-.... .+.+..+++++.+. +.++++....+.. ....+.+. ..+++.+.+.+++.
T Consensus 197 ~~~vl~~~hr~~~~-~k~~~~ll~a~~~l~~~~~~~~~vi~~~~~~~--------~~~~~~~~~~~~~~v~~~~~~~~~~ 267 (365)
T TIGR00236 197 KRYILLTLHRRENV-GEPLENIFKAIREIVEEFEDVQIVYPVHLNPV--------VREPLHKHLGDSKRVHLIEPLEYLD 267 (365)
T ss_pred CCEEEEecCchhhh-hhHHHHHHHHHHHHHHHCCCCEEEEECCCChH--------HHHHHHHHhCCCCCEEEECCCChHH
Confidence 35666655432211 23466677766543 4556665433210 00111111 12455666666654
Q ss_pred --hhhhcccCCceeeccCchhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEecccCHHHHHHHHHHHhcCchhH
Q 018483 241 --EVLANDAVGGFWSHCGWNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFEGGTIKKAIKRLMVDTEGK 318 (355)
Q Consensus 241 --~~L~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~l~~ai~~~l~~~~~~ 318 (355)
.+++++++ +|+-.|.. +.||+++|+|+|.++-.++++. +.+ .|.+..+ .-+.++|.+++.++++| +
T Consensus 268 ~~~~l~~ad~--vv~~Sg~~-~~EA~a~g~PvI~~~~~~~~~e----~~~-~g~~~lv-~~d~~~i~~ai~~ll~~---~ 335 (365)
T TIGR00236 268 FLNLAANSHL--ILTDSGGV-QEEAPSLGKPVLVLRDTTERPE----TVE-AGTNKLV-GTDKENITKAAKRLLTD---P 335 (365)
T ss_pred HHHHHHhCCE--EEECChhH-HHHHHHcCCCEEECCCCCCChH----HHh-cCceEEe-CCCHHHHHHHHHHHHhC---h
Confidence 45566665 89877644 7999999999999976665542 223 3666554 35789999999999988 4
Q ss_pred HHHHHH
Q 018483 319 EMRKKA 324 (355)
Q Consensus 319 ~~~~~a 324 (355)
..+++.
T Consensus 336 ~~~~~~ 341 (365)
T TIGR00236 336 DEYKKM 341 (365)
T ss_pred HHHHHh
Confidence 444443
No 72
>PRK10307 putative glycosyl transferase; Provisional
Probab=97.72 E-value=0.0011 Score=63.67 Aligned_cols=114 Identities=14% Similarity=0.102 Sum_probs=75.0
Q ss_pred CCCceeecCChHh---hhhcccCCceeeccCc------hhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEeccc
Q 018483 229 ERGCIVEWAPQKE---VLANDAVGGFWSHCGW------NSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEF 299 (355)
Q Consensus 229 ~~~~~~~~~pq~~---~L~~~~~~~~I~HgG~------~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~ 299 (355)
.|+.+.+|+|+.+ +++.+++.++.++.+. +.+.|++++|+|+|+....+.. ....+ + +.|+.++.-
T Consensus 284 ~~v~f~G~~~~~~~~~~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~--~~~~i-~--~~G~~~~~~ 358 (412)
T PRK10307 284 PNVHFLPLQPYDRLPALLKMADCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTE--LGQLV-E--GIGVCVEPE 358 (412)
T ss_pred CceEEeCCCCHHHHHHHHHhcCEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCch--HHHHH-h--CCcEEeCCC
Confidence 3567789998754 6778887555555432 3478999999999998754311 11233 2 577777767
Q ss_pred CHHHHHHHHHHHhcCch-hHHHHHHHHHHHHHHhhhhhcCCChHHHHHHHHHHHHc
Q 018483 300 EGGTIKKAIKRLMVDTE-GKEMRKKAIHLKEKVELPLKEGGSCYNSLNDLVKKILS 354 (355)
Q Consensus 300 ~~~~l~~ai~~~l~~~~-~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~l~~ 354 (355)
+.+++.++|.++++|++ ...+++++++..+ +.-+.....+++++.+++
T Consensus 359 d~~~la~~i~~l~~~~~~~~~~~~~a~~~~~-------~~fs~~~~~~~~~~~~~~ 407 (412)
T PRK10307 359 SVEALVAAIAALARQALLRPKLGTVAREYAE-------RTLDKENVLRQFIADIRG 407 (412)
T ss_pred CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH-------HHcCHHHHHHHHHHHHHH
Confidence 78999999999998854 4556666655443 233455666666665543
No 73
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=97.71 E-value=0.012 Score=56.94 Aligned_cols=112 Identities=13% Similarity=0.091 Sum_probs=70.6
Q ss_pred CCCCceeecCChHhh---hhcc--cCCceeecc---C-chhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEecc
Q 018483 228 GERGCIVEWAPQKEV---LAND--AVGGFWSHC---G-WNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEE 298 (355)
Q Consensus 228 ~~~~~~~~~~pq~~~---L~~~--~~~~~I~Hg---G-~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~ 298 (355)
.+++.+.+++++.++ ++.+ ++++||.-. | -.+++||+++|+|+|+.... .....+.+ -..|+.++.
T Consensus 316 ~~~V~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~g----g~~eiv~~-~~~G~lv~~ 390 (439)
T TIGR02472 316 YGKVAYPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACGLPIVATDDG----GPRDIIAN-CRNGLLVDV 390 (439)
T ss_pred CceEEecCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhCCCEEEeCCC----CcHHHhcC-CCcEEEeCC
Confidence 355566677777654 5444 224477543 3 46999999999999988643 34555654 357888777
Q ss_pred cCHHHHHHHHHHHhcCch-hHHHHHHHHHHHHHHhhhhhcCCChHHHHHHHHHH
Q 018483 299 FEGGTIKKAIKRLMVDTE-GKEMRKKAIHLKEKVELPLKEGGSCYNSLNDLVKK 351 (355)
Q Consensus 299 ~~~~~l~~ai~~~l~~~~-~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~ 351 (355)
-+.+++.++|.++++|++ ...+.+++++. +.+.-+-...++++.+.
T Consensus 391 ~d~~~la~~i~~ll~~~~~~~~~~~~a~~~-------~~~~fsw~~~~~~~~~l 437 (439)
T TIGR02472 391 LDLEAIASALEDALSDSSQWQLWSRNGIEG-------VRRHYSWDAHVEKYLRI 437 (439)
T ss_pred CCHHHHHHHHHHHHhCHHHHHHHHHHHHHH-------HHHhCCHHHHHHHHHHH
Confidence 788999999999999853 33444444332 22233444455555443
No 74
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=97.66 E-value=0.00047 Score=64.77 Aligned_cols=133 Identities=18% Similarity=0.120 Sum_probs=79.9
Q ss_pred CCceEEEeecccccc-CHHHHHHHHHHHHhCCC-CEEEEEcCCCcCCCCcccCCChhhhhhc---CCCCceeecCChH--
Q 018483 168 PKSVIYVSFGSIASI-DEKELLETAWGLANCEQ-PFLWVVRPGLVRGSNCLELLPINFQDSV---GERGCIVEWAPQK-- 240 (355)
Q Consensus 168 ~~~~v~vs~GS~~~~-~~~~~~~~~~~l~~~~~-~~i~~~~~~~~~~~~~~~~lp~~~~~~~---~~~~~~~~~~pq~-- 240 (355)
+++.|++++|..... ..+.+..+++++.+... .+.+...... .. ...+.+.. .+. .+++.+.+..++.
T Consensus 197 ~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~~~~vi~~~~~-~~---~~~l~~~~-~~~~~~~~~v~~~~~~~~~~~ 271 (363)
T cd03786 197 PKKYILVTLHRVENVDDGEQLEEILEALAELAEEDVPVVFPNHP-RT---RPRIREAG-LEFLGHHPNVLLISPLGYLYF 271 (363)
T ss_pred CCCEEEEEeCCccccCChHHHHHHHHHHHHHHhcCCEEEEECCC-Ch---HHHHHHHH-HhhccCCCCEEEECCcCHHHH
Confidence 456788888876643 45667778888876432 2333332211 00 00111111 111 2344555555443
Q ss_pred -hhhhcccCCceeeccCchhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEecccCHHHHHHHHHHHhcC
Q 018483 241 -EVLANDAVGGFWSHCGWNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFEGGTIKKAIKRLMVD 314 (355)
Q Consensus 241 -~~L~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~l~~ai~~~l~~ 314 (355)
.++..+++ ||+-+| |.+.||+++|+|+|+++.. |. +..+.+ -|+++.+. -+.+++.++|.+++++
T Consensus 272 ~~l~~~ad~--~v~~Sg-gi~~Ea~~~g~PvI~~~~~--~~--~~~~~~-~g~~~~~~-~~~~~i~~~i~~ll~~ 337 (363)
T cd03786 272 LLLLKNADL--VLTDSG-GIQEEASFLGVPVLNLRDR--TE--RPETVE-SGTNVLVG-TDPEAILAAIEKLLSD 337 (363)
T ss_pred HHHHHcCcE--EEEcCc-cHHhhhhhcCCCEEeeCCC--Cc--cchhhh-eeeEEecC-CCHHHHHHHHHHHhcC
Confidence 34555666 999999 7788999999999998632 22 334444 47665553 2589999999999988
No 75
>COG5017 Uncharacterized conserved protein [Function unknown]
Probab=97.66 E-value=0.00059 Score=53.29 Aligned_cols=107 Identities=16% Similarity=0.144 Sum_probs=66.7
Q ss_pred EEEeeccccccCHHHHH--HHHHHHHhCCCCEEEEEcCCCcCCCCcccCCC-hhhhhhcCCCCceeec--CCh-Hhhhhc
Q 018483 172 IYVSFGSIASIDEKELL--ETAWGLANCEQPFLWVVRPGLVRGSNCLELLP-INFQDSVGERGCIVEW--APQ-KEVLAN 245 (355)
Q Consensus 172 v~vs~GS~~~~~~~~~~--~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp-~~~~~~~~~~~~~~~~--~pq-~~~L~~ 245 (355)
+||+-||....-...+. ++.+-.+....++|..++... ..| .+. .+.+| .+- +.+...
T Consensus 2 ifVTvGstf~~f~rlv~k~e~~el~~~i~e~lIvQyGn~d--------~kpvagl--------~v~~F~~~~kiQsli~d 65 (161)
T COG5017 2 IFVTVGSTFYPFNRLVLKIEVLELTELIQEELIVQYGNGD--------IKPVAGL--------RVYGFDKEEKIQSLIHD 65 (161)
T ss_pred eEEEecCccchHHHHHhhHHHHHHHHHhhhheeeeecCCC--------ccccccc--------EEEeechHHHHHHHhhc
Confidence 78899998541111111 122222233467888988742 122 121 34333 332 345555
Q ss_pred ccCCceeeccCchhHHHHhhcCCcEEecccc--------CchhhhHHHHhhhhcceeEec
Q 018483 246 DAVGGFWSHCGWNSTLESICEGVPMLCKPFF--------GDQNLNMRYVCDVWNVGLELE 297 (355)
Q Consensus 246 ~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~--------~DQ~~na~~~~~~~g~g~~l~ 297 (355)
+++ +|+|+|.||++.++..++|.|++|-. .+|..-|..+++ .+.=+...
T Consensus 66 arI--VISHaG~GSIL~~~rl~kplIv~pr~s~y~elvDdHQvela~klae-~~~vv~~s 122 (161)
T COG5017 66 ARI--VISHAGEGSILLLLRLDKPLIVVPRSSQYQELVDDHQVELALKLAE-INYVVACS 122 (161)
T ss_pred ceE--EEeccCcchHHHHhhcCCcEEEEECchhHHHhhhhHHHHHHHHHHh-cCceEEEc
Confidence 665 99999999999999999999999963 356777888876 56555543
No 76
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=97.65 E-value=0.0034 Score=58.48 Aligned_cols=112 Identities=13% Similarity=0.039 Sum_probs=73.4
Q ss_pred CCCceeecCC-hH---hhhhcccCCceeecc----CchhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEecccC
Q 018483 229 ERGCIVEWAP-QK---EVLANDAVGGFWSHC----GWNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFE 300 (355)
Q Consensus 229 ~~~~~~~~~p-q~---~~L~~~~~~~~I~Hg----G~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~ 300 (355)
.++.+.+|++ +. .+++.+++ +|.-. ..++++||+++|+|+|+.... .....+.+ -+.|..+...+
T Consensus 244 ~~v~~~g~~~~~~~~~~~~~~ad~--~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~----~~~e~~~~-~~~g~~~~~~~ 316 (365)
T cd03825 244 FPVHYLGSLNDDESLALIYSAADV--FVVPSLQENFPNTAIEALACGTPVVAFDVG----GIPDIVDH-GVTGYLAKPGD 316 (365)
T ss_pred CceEecCCcCCHHHHHHHHHhCCE--EEeccccccccHHHHHHHhcCCCEEEecCC----CChhheeC-CCceEEeCCCC
Confidence 4446678888 43 35777776 76643 358999999999999986542 23334444 25777776678
Q ss_pred HHHHHHHHHHHhcCch-hHHHHHHHHHHHHHHhhhhhcCCChHHHHHHHHHHHHc
Q 018483 301 GGTIKKAIKRLMVDTE-GKEMRKKAIHLKEKVELPLKEGGSCYNSLNDLVKKILS 354 (355)
Q Consensus 301 ~~~l~~ai~~~l~~~~-~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~l~~ 354 (355)
.+++.+++.+++++++ ..++.+++++... +.-+.....+++++..++
T Consensus 317 ~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~-------~~~s~~~~~~~~~~~y~~ 364 (365)
T cd03825 317 PEDLAEGIEWLLADPDEREELGEAARELAE-------NEFDSRVQAKRYLSLYEE 364 (365)
T ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHHH-------HhcCHHHHHHHHHHHHhh
Confidence 8999999999998853 3334444443322 334556667777776654
No 77
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=97.64 E-value=0.0012 Score=60.65 Aligned_cols=147 Identities=22% Similarity=0.209 Sum_probs=84.3
Q ss_pred CCceEEEeeccccc-cCHHHHHHHHHHHHh--CCCCEEEEEcCCCcCCCCcccCCChh-hhh-hcCCCCceeecCCh-Hh
Q 018483 168 PKSVIYVSFGSIAS-IDEKELLETAWGLAN--CEQPFLWVVRPGLVRGSNCLELLPIN-FQD-SVGERGCIVEWAPQ-KE 241 (355)
Q Consensus 168 ~~~~v~vs~GS~~~-~~~~~~~~~~~~l~~--~~~~~i~~~~~~~~~~~~~~~~lp~~-~~~-~~~~~~~~~~~~pq-~~ 241 (355)
.++.+++..|+... ...+.+-+.++.+.+ .+.++++ ++....... .... +.. ....++.+.++..+ ..
T Consensus 186 ~~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~~~l~i-~G~~~~~~~-----~~~~~~~~~~~~~~v~~~g~~~~~~~ 259 (359)
T cd03808 186 EDDPVFLFVARLLKDKGIDELLEAARILKAKGPNVRLLL-VGDGDEENP-----AAILEIEKLGLEGRVEFLGFRDDVPE 259 (359)
T ss_pred CCCcEEEEEeccccccCHHHHHHHHHHHHhcCCCeEEEE-EcCCCcchh-----hHHHHHHhcCCcceEEEeeccccHHH
Confidence 34567778887765 334444444444443 2344443 333221110 0000 111 11234455566443 45
Q ss_pred hhhcccCCceeecc----CchhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEecccCHHHHHHHHHHHhcCch-
Q 018483 242 VLANDAVGGFWSHC----GWNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFEGGTIKKAIKRLMVDTE- 316 (355)
Q Consensus 242 ~L~~~~~~~~I~Hg----G~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~l~~ai~~~l~~~~- 316 (355)
++..+++ +|.-+ -.++++||+++|+|+|+-+..+ +...+.+ .+.|..++.-+.+++.++|.+++.|++
T Consensus 260 ~~~~adi--~i~ps~~e~~~~~~~Ea~~~G~Pvi~s~~~~----~~~~i~~-~~~g~~~~~~~~~~~~~~i~~l~~~~~~ 332 (359)
T cd03808 260 LLAAADV--FVLPSYREGLPRVLLEAMAMGRPVIATDVPG----CREAVID-GVNGFLVPPGDAEALADAIERLIEDPEL 332 (359)
T ss_pred HHHhccE--EEecCcccCcchHHHHHHHcCCCEEEecCCC----chhhhhc-CcceEEECCCCHHHHHHHHHHHHhCHHH
Confidence 7777777 66433 2579999999999999965433 3455655 477887776678999999999998854
Q ss_pred hHHHHHHHHHH
Q 018483 317 GKEMRKKAIHL 327 (355)
Q Consensus 317 ~~~~~~~a~~l 327 (355)
..++.+++++.
T Consensus 333 ~~~~~~~~~~~ 343 (359)
T cd03808 333 RARMGQAARKR 343 (359)
T ss_pred HHHHHHHHHHH
Confidence 33444444443
No 78
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=97.61 E-value=0.0033 Score=58.24 Aligned_cols=134 Identities=14% Similarity=0.069 Sum_probs=79.6
Q ss_pred hhHhhhccCCCceEEEeeccccc----cCHHHHHHHHHHHHhCCCCEEEEEcCCCcCCCCcccCCChhhhhhcCCCCce-
Q 018483 159 CISWLNKQAPKSVIYVSFGSIAS----IDEKELLETAWGLANCEQPFLWVVRPGLVRGSNCLELLPINFQDSVGERGCI- 233 (355)
Q Consensus 159 ~~~~l~~~~~~~~v~vs~GS~~~----~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~- 233 (355)
..+-+.. .+++.|++-+-+..+ .....+..+++.|++.+..++..-+... .+.-+ ++. +..+
T Consensus 170 vl~~lg~-~~~~yIvvR~~~~~A~y~~~~~~i~~~ii~~L~~~~~~vV~ipr~~~---------~~~~~-~~~--~~~i~ 236 (335)
T PF04007_consen 170 VLKELGL-DDEPYIVVRPEAWKASYDNGKKSILPEIIEELEKYGRNVVIIPRYED---------QRELF-EKY--GVIIP 236 (335)
T ss_pred HHHHcCC-CCCCEEEEEeccccCeeecCccchHHHHHHHHHhhCceEEEecCCcc---------hhhHH-hcc--Ccccc
Confidence 4444442 356788888877544 3345677899999988776554443321 11111 111 1122
Q ss_pred eecCChHhhhhcccCCceeeccCchhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEecccCHHHHHHHHHHHh
Q 018483 234 VEWAPQKEVLANDAVGGFWSHCGWNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFEGGTIKKAIKRLM 312 (355)
Q Consensus 234 ~~~~pq~~~L~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~l~~ai~~~l 312 (355)
..-+.-.++|.++++ +|+-|| +...||...|+|.|.+ +.++-...-+.+.+ .|. ....-+.+++.+.+.+.+
T Consensus 237 ~~~vd~~~Ll~~a~l--~Ig~gg-TMa~EAA~LGtPaIs~-~~g~~~~vd~~L~~-~Gl--l~~~~~~~ei~~~v~~~~ 308 (335)
T PF04007_consen 237 PEPVDGLDLLYYADL--VIGGGG-TMAREAALLGTPAISC-FPGKLLAVDKYLIE-KGL--LYHSTDPDEIVEYVRKNL 308 (335)
T ss_pred CCCCCHHHHHHhcCE--EEeCCc-HHHHHHHHhCCCEEEe-cCCcchhHHHHHHH-CCC--eEecCCHHHHHHHHHHhh
Confidence 244555689999998 999666 7889999999999985 22342222344545 454 333566777776555533
No 79
>PLN02949 transferase, transferring glycosyl groups
Probab=97.60 E-value=0.0075 Score=58.77 Aligned_cols=111 Identities=14% Similarity=0.041 Sum_probs=65.6
Q ss_pred CCCCceeecCChHh---hhhcccCCceee---ccCc-hhHHHHhhcCCcEEeccccCchhhhHHHHhhh-hc-ceeEecc
Q 018483 228 GERGCIVEWAPQKE---VLANDAVGGFWS---HCGW-NSTLESICEGVPMLCKPFFGDQNLNMRYVCDV-WN-VGLELEE 298 (355)
Q Consensus 228 ~~~~~~~~~~pq~~---~L~~~~~~~~I~---HgG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~-~g-~g~~l~~ 298 (355)
.+++.+.+++|+.+ +|+.+++ +|. +=|. .++.||+++|+|+|+....+- ....+.+. -| .|... .
T Consensus 334 ~~~V~f~g~v~~~el~~ll~~a~~--~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp---~~eIV~~~~~g~tG~l~-~ 407 (463)
T PLN02949 334 DGDVEFHKNVSYRDLVRLLGGAVA--GLHSMIDEHFGISVVEYMAAGAVPIAHNSAGP---KMDIVLDEDGQQTGFLA-T 407 (463)
T ss_pred CCcEEEeCCCCHHHHHHHHHhCcE--EEeCCccCCCChHHHHHHHcCCcEEEeCCCCC---cceeeecCCCCcccccC-C
Confidence 45667778888654 5666766 552 2233 389999999999999865431 00111110 01 24333 2
Q ss_pred cCHHHHHHHHHHHhcC-ch-hHHHHHHHHHHHHHHhhhhhcCCChHHHHHHHHHHHH
Q 018483 299 FEGGTIKKAIKRLMVD-TE-GKEMRKKAIHLKEKVELPLKEGGSCYNSLNDLVKKIL 353 (355)
Q Consensus 299 ~~~~~l~~ai~~~l~~-~~-~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~l~ 353 (355)
+.+++.++|.+++++ ++ ..++.+++++-.+. -+.....+++.+.++
T Consensus 408 -~~~~la~ai~~ll~~~~~~r~~m~~~ar~~~~~--------FS~e~~~~~~~~~i~ 455 (463)
T PLN02949 408 -TVEEYADAILEVLRMRETERLEIAAAARKRANR--------FSEQRFNEDFKDAIR 455 (463)
T ss_pred -CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH--------cCHHHHHHHHHHHHH
Confidence 789999999999984 22 44566666554433 344555555554443
No 80
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=97.59 E-value=0.0011 Score=60.63 Aligned_cols=93 Identities=20% Similarity=0.171 Sum_probs=60.8
Q ss_pred CCceeecCC-hHhhhhcccCCceeecc----CchhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEecccCHHHH
Q 018483 230 RGCIVEWAP-QKEVLANDAVGGFWSHC----GWNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFEGGTI 304 (355)
Q Consensus 230 ~~~~~~~~p-q~~~L~~~~~~~~I~Hg----G~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~l 304 (355)
++.+.++.. -..++..+++ +|.-. ..++++||+++|+|+|+.+..+.+ ..+.+....|..++.-+.+++
T Consensus 236 ~v~~~g~~~~~~~~~~~ad~--~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~ 309 (348)
T cd03820 236 RVILLGFTKNIEEYYAKASI--FVLTSRFEGFPMVLLEAMAFGLPVISFDCPTGP----SEIIEDGVNGLLVPNGDVEAL 309 (348)
T ss_pred eEEEcCCcchHHHHHHhCCE--EEeCccccccCHHHHHHHHcCCCEEEecCCCch----HhhhccCcceEEeCCCCHHHH
Confidence 334555533 2457777776 65443 247899999999999987654433 223332137887777778999
Q ss_pred HHHHHHHhcCch-hHHHHHHHHHHH
Q 018483 305 KKAIKRLMVDTE-GKEMRKKAIHLK 328 (355)
Q Consensus 305 ~~ai~~~l~~~~-~~~~~~~a~~l~ 328 (355)
.++|.++++|++ ...+++++++..
T Consensus 310 ~~~i~~ll~~~~~~~~~~~~~~~~~ 334 (348)
T cd03820 310 AEALLRLMEDEELRKRMGANARESA 334 (348)
T ss_pred HHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 999999999954 444555554443
No 81
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=97.57 E-value=0.0011 Score=63.58 Aligned_cols=138 Identities=20% Similarity=0.191 Sum_probs=75.3
Q ss_pred CCCceEEEeeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCcCCCCcccCCChhhhhhc------CCCCceeecCChH
Q 018483 167 APKSVIYVSFGSIASIDEKELLETAWGLANCEQPFLWVVRPGLVRGSNCLELLPINFQDSV------GERGCIVEWAPQK 240 (355)
Q Consensus 167 ~~~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~------~~~~~~~~~~pq~ 240 (355)
++..++|.||.+.....++.+..-.+-|++.+...+|..+.+.. + ..++.+.. .+|+.+.++.|+.
T Consensus 282 p~d~vvF~~fn~~~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~~-~-------~~~l~~~~~~~Gv~~~Ri~f~~~~~~~ 353 (468)
T PF13844_consen 282 PEDAVVFGSFNNLFKISPETLDLWARILKAVPNSRLWLLRFPAS-G-------EARLRRRFAAHGVDPDRIIFSPVAPRE 353 (468)
T ss_dssp -SSSEEEEE-S-GGG--HHHHHHHHHHHHHSTTEEEEEEETSTT-H-------HHHHHHHHHHTTS-GGGEEEEE---HH
T ss_pred CCCceEEEecCccccCCHHHHHHHHHHHHhCCCcEEEEeeCCHH-H-------HHHHHHHHHHcCCChhhEEEcCCCCHH
Confidence 45679999999999999999999999999999999998765421 1 02222111 2455667777765
Q ss_pred hhhh-cccCCcee---eccCchhHHHHhhcCCcEEeccccCchhhhH-HHHhhhhcceeEecccCHHH-HHHHHHHHhcC
Q 018483 241 EVLA-NDAVGGFW---SHCGWNSTLESICEGVPMLCKPFFGDQNLNM-RYVCDVWNVGLELEEFEGGT-IKKAIKRLMVD 314 (355)
Q Consensus 241 ~~L~-~~~~~~~I---~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na-~~~~~~~g~g~~l~~~~~~~-l~~ai~~~l~~ 314 (355)
+-|. +..+++++ ..+|.+|++||++.|||+|.+|--.-.-..+ ..+.. +|+.-.+- -+.++ +..|+ ++-+|
T Consensus 354 ehl~~~~~~DI~LDT~p~nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~-lGl~ElIA-~s~~eYv~~Av-~La~D 430 (468)
T PF13844_consen 354 EHLRRYQLADICLDTFPYNGGTTTLDALWMGVPVVTLPGETMASRVGASILRA-LGLPELIA-DSEEEYVEIAV-RLATD 430 (468)
T ss_dssp HHHHHGGG-SEEE--SSS--SHHHHHHHHHT--EEB---SSGGGSHHHHHHHH-HT-GGGB--SSHHHHHHHHH-HHHH-
T ss_pred HHHHHhhhCCEEeeCCCCCCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHH-cCCchhcC-CCHHHHHHHHH-HHhCC
Confidence 5442 23333353 4678899999999999999999443333333 44444 66664443 33444 55555 56666
Q ss_pred c
Q 018483 315 T 315 (355)
Q Consensus 315 ~ 315 (355)
.
T Consensus 431 ~ 431 (468)
T PF13844_consen 431 P 431 (468)
T ss_dssp H
T ss_pred H
Confidence 4
No 82
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=97.57 E-value=0.0019 Score=59.77 Aligned_cols=90 Identities=14% Similarity=0.111 Sum_probs=59.3
Q ss_pred CCCceeecCChHh---hhhcccCCceeec----cCchhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEecccCH
Q 018483 229 ERGCIVEWAPQKE---VLANDAVGGFWSH----CGWNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFEG 301 (355)
Q Consensus 229 ~~~~~~~~~pq~~---~L~~~~~~~~I~H----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~ 301 (355)
+++.+.+|+++.+ ++..+++ +|.- |-.+++.||+++|+|+|+.+.. .....+. . +.|.... .+.
T Consensus 262 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~PvI~~~~~----~~~~~~~-~-~~~~~~~-~~~ 332 (375)
T cd03821 262 DRVTFTGMLYGEDKAAALADADL--FVLPSHSENFGIVVAEALACGTPVVTTDKV----PWQELIE-Y-GCGWVVD-DDV 332 (375)
T ss_pred ceEEEcCCCChHHHHHHHhhCCE--EEeccccCCCCcHHHHHHhcCCCEEEcCCC----CHHHHhh-c-CceEEeC-CCh
Confidence 4557779999654 5677776 5432 2247899999999999997643 2334443 2 6666654 334
Q ss_pred HHHHHHHHHHhcCch-hHHHHHHHHHH
Q 018483 302 GTIKKAIKRLMVDTE-GKEMRKKAIHL 327 (355)
Q Consensus 302 ~~l~~ai~~~l~~~~-~~~~~~~a~~l 327 (355)
+++.++|.+++++++ ...+.+++++.
T Consensus 333 ~~~~~~i~~l~~~~~~~~~~~~~~~~~ 359 (375)
T cd03821 333 DALAAALRRALELPQRLKAMGENGRAL 359 (375)
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 999999999999843 34444444444
No 83
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=97.53 E-value=0.0016 Score=61.24 Aligned_cols=147 Identities=12% Similarity=0.117 Sum_probs=84.6
Q ss_pred ceEEEeeccccccCHHHHHHHHHHHHhCC--CCEEEEEcCCCcCCCCcccCCChhhhh-hcCCCCceeecCCh--Hh---
Q 018483 170 SVIYVSFGSIASIDEKELLETAWGLANCE--QPFLWVVRPGLVRGSNCLELLPINFQD-SVGERGCIVEWAPQ--KE--- 241 (355)
Q Consensus 170 ~~v~vs~GS~~~~~~~~~~~~~~~l~~~~--~~~i~~~~~~~~~~~~~~~~lp~~~~~-~~~~~~~~~~~~pq--~~--- 241 (355)
+.+++..|.......+.+..+++++.+.. .+++ .+|.+.. .+.+-+...+ ..++++.+.+|+++ ..
T Consensus 180 ~~~i~~~Grl~~~~~k~~~~l~~a~~~~~~~~~l~-ivG~g~~-----~~~l~~~~~~~~l~~~v~f~G~~~~~~~~~~~ 253 (359)
T PRK09922 180 PAVFLYVGRLKFEGQKNVKELFDGLSQTTGEWQLH-IIGDGSD-----FEKCKAYSRELGIEQRIIWHGWQSQPWEVVQQ 253 (359)
T ss_pred CcEEEEEEEEecccCcCHHHHHHHHHhhCCCeEEE-EEeCCcc-----HHHHHHHHHHcCCCCeEEEecccCCcHHHHHH
Confidence 34566777765323344666777776543 3333 4443210 0111111111 12345677788754 22
Q ss_pred hhhcccCCceee--c--cCchhHHHHhhcCCcEEecc-ccCchhhhHHHHhhhhcceeEecccCHHHHHHHHHHHhcCch
Q 018483 242 VLANDAVGGFWS--H--CGWNSTLESICEGVPMLCKP-FFGDQNLNMRYVCDVWNVGLELEEFEGGTIKKAIKRLMVDTE 316 (355)
Q Consensus 242 ~L~~~~~~~~I~--H--gG~~s~~eal~~GvP~l~~P-~~~DQ~~na~~~~~~~g~g~~l~~~~~~~l~~ai~~~l~~~~ 316 (355)
.++.+++ +|. + |-..++.||+++|+|+|+.- ..+ ....+++ -..|..++.-+.+++.++|.++++|++
T Consensus 254 ~~~~~d~--~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g----~~eiv~~-~~~G~lv~~~d~~~la~~i~~l~~~~~ 326 (359)
T PRK09922 254 KIKNVSA--LLLTSKFEGFPMTLLEAMSYGIPCISSDCMSG----PRDIIKP-GLNGELYTPGNIDEFVGKLNKVISGEV 326 (359)
T ss_pred HHhcCcE--EEECCcccCcChHHHHHHHcCCCEEEeCCCCC----hHHHccC-CCceEEECCCCHHHHHHHHHHHHhCcc
Confidence 2334455 554 2 33579999999999999875 322 2245554 356877777789999999999999865
Q ss_pred ---hHHHHHHHHHHHH
Q 018483 317 ---GKEMRKKAIHLKE 329 (355)
Q Consensus 317 ---~~~~~~~a~~l~~ 329 (355)
...+++++++++.
T Consensus 327 ~~~~~~~~~~~~~~~~ 342 (359)
T PRK09922 327 KYQHDAIPNSIERFYE 342 (359)
T ss_pred cCCHHHHHHHHHHhhH
Confidence 3344555555544
No 84
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=97.51 E-value=0.023 Score=59.76 Aligned_cols=95 Identities=18% Similarity=0.198 Sum_probs=64.4
Q ss_pred CCCceeecCChHh---hhhccc--CCceeec---cC-chhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEeccc
Q 018483 229 ERGCIVEWAPQKE---VLANDA--VGGFWSH---CG-WNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEF 299 (355)
Q Consensus 229 ~~~~~~~~~pq~~---~L~~~~--~~~~I~H---gG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~ 299 (355)
+++.+.+++++.+ ++..++ .++||.- =| -.+++||+++|+|+|+-...+ ....+.. -..|+.++.-
T Consensus 548 g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG----~~EII~~-g~nGlLVdP~ 622 (1050)
T TIGR02468 548 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGG----PVDIHRV-LDNGLLVDPH 622 (1050)
T ss_pred CeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCC----cHHHhcc-CCcEEEECCC
Confidence 5556668888765 344442 2347653 23 369999999999999986432 3334444 3568877777
Q ss_pred CHHHHHHHHHHHhcCch-hHHHHHHHHHHH
Q 018483 300 EGGTIKKAIKRLMVDTE-GKEMRKKAIHLK 328 (355)
Q Consensus 300 ~~~~l~~ai~~~l~~~~-~~~~~~~a~~l~ 328 (355)
+.+.|.++|.++++|++ ..++.+++.+..
T Consensus 623 D~eaLA~AL~~LL~Dpelr~~m~~~gr~~v 652 (1050)
T TIGR02468 623 DQQAIADALLKLVADKQLWAECRQNGLKNI 652 (1050)
T ss_pred CHHHHHHHHHHHhhCHHHHHHHHHHHHHHH
Confidence 89999999999999865 455666665544
No 85
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=97.49 E-value=0.0054 Score=56.50 Aligned_cols=76 Identities=21% Similarity=0.232 Sum_probs=52.0
Q ss_pred CceeecCCh-HhhhhcccCCceeeccC----chhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEecccCHHHHH
Q 018483 231 GCIVEWAPQ-KEVLANDAVGGFWSHCG----WNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFEGGTIK 305 (355)
Q Consensus 231 ~~~~~~~pq-~~~L~~~~~~~~I~HgG----~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~l~ 305 (355)
+.+.+...+ ..+++.+++ +|..+. .+++.||+++|+|+|+... ..+...+.+ .|..+..-+.+++.
T Consensus 253 v~~~g~~~~~~~~~~~adi--~v~ps~~e~~~~~~~Ea~a~g~PvI~~~~----~~~~e~~~~---~g~~~~~~~~~~l~ 323 (365)
T cd03807 253 VILLGERSDVPALLNALDV--FVLSSLSEGFPNVLLEAMACGLPVVATDV----GDNAELVGD---TGFLVPPGDPEALA 323 (365)
T ss_pred EEEccccccHHHHHHhCCE--EEeCCccccCCcHHHHHHhcCCCEEEcCC----CChHHHhhc---CCEEeCCCCHHHHH
Confidence 344443333 457777777 665443 4799999999999998543 334445533 45555555789999
Q ss_pred HHHHHHhcCc
Q 018483 306 KAIKRLMVDT 315 (355)
Q Consensus 306 ~ai~~~l~~~ 315 (355)
++|.++++++
T Consensus 324 ~~i~~l~~~~ 333 (365)
T cd03807 324 EAIEALLADP 333 (365)
T ss_pred HHHHHHHhCh
Confidence 9999999885
No 86
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=97.49 E-value=0.0028 Score=59.93 Aligned_cols=163 Identities=17% Similarity=0.107 Sum_probs=91.0
Q ss_pred ceEEEeeccccccCHHHHHHHHHHHHhC--CCCEEEEEcCCCcCCCCcccCCChhhhhh---c---CCCCce-eecCChH
Q 018483 170 SVIYVSFGSIASIDEKELLETAWGLANC--EQPFLWVVRPGLVRGSNCLELLPINFQDS---V---GERGCI-VEWAPQK 240 (355)
Q Consensus 170 ~~v~vs~GS~~~~~~~~~~~~~~~l~~~--~~~~i~~~~~~~~~~~~~~~~lp~~~~~~---~---~~~~~~-~~~~pq~ 240 (355)
..+++..|.... .+.+..+++++.+. +..+++..++.... .+-+.+.+. . .+++.. .+++++.
T Consensus 201 ~~~i~~~Grl~~--~Kg~~~li~a~~~l~~~~~l~i~g~g~~~~------~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 272 (388)
T TIGR02149 201 RPYILFVGRITR--QKGVPHLLDAVHYIPKDVQVVLCAGAPDTP------EVAEEVRQAVALLDRNRTGIIWINKMLPKE 272 (388)
T ss_pred ceEEEEEccccc--ccCHHHHHHHHHHHhhcCcEEEEeCCCCcH------HHHHHHHHHHHHhccccCceEEecCCCCHH
Confidence 345556676653 33455566666553 45665554432100 011111111 1 112233 3567754
Q ss_pred ---hhhhcccCCceeec----cCchhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEecccCH------HHHHHH
Q 018483 241 ---EVLANDAVGGFWSH----CGWNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFEG------GTIKKA 307 (355)
Q Consensus 241 ---~~L~~~~~~~~I~H----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~------~~l~~a 307 (355)
.++.++++ ||.= +...+++||+++|+|+|+... ......+++ -+.|..++.-+. +++.++
T Consensus 273 ~~~~~~~~aDv--~v~ps~~e~~g~~~lEA~a~G~PvI~s~~----~~~~e~i~~-~~~G~~~~~~~~~~~~~~~~l~~~ 345 (388)
T TIGR02149 273 ELVELLSNAEV--FVCPSIYEPLGIVNLEAMACGTPVVASAT----GGIPEVVVD-GETGFLVPPDNSDADGFQAELAKA 345 (388)
T ss_pred HHHHHHHhCCE--EEeCCccCCCChHHHHHHHcCCCEEEeCC----CCHHHHhhC-CCceEEcCCCCCcccchHHHHHHH
Confidence 35777777 6531 234678999999999999654 335566655 367888873333 889999
Q ss_pred HHHHhcCch-hHHHHHHHHHHHHHHhhhhhcCCChHHHHHHHHHHHHc
Q 018483 308 IKRLMVDTE-GKEMRKKAIHLKEKVELPLKEGGSCYNSLNDLVKKILS 354 (355)
Q Consensus 308 i~~~l~~~~-~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~l~~ 354 (355)
|.++++|++ .+.+.+++++... +.-+.....+++++.+++
T Consensus 346 i~~l~~~~~~~~~~~~~a~~~~~-------~~~s~~~~~~~~~~~y~~ 386 (388)
T TIGR02149 346 INILLADPELAKKMGIAGRKRAE-------EEFSWGSIAKKTVEMYRK 386 (388)
T ss_pred HHHHHhCHHHHHHHHHHHHHHHH-------HhCCHHHHHHHHHHHHHh
Confidence 999998854 3445555544332 223455566666665543
No 87
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=97.49 E-value=0.002 Score=61.97 Aligned_cols=85 Identities=16% Similarity=0.219 Sum_probs=62.2
Q ss_pred ecCChHh---hhhcccCCceee----ccC---chhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEecccCHHHH
Q 018483 235 EWAPQKE---VLANDAVGGFWS----HCG---WNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFEGGTI 304 (355)
Q Consensus 235 ~~~pq~~---~L~~~~~~~~I~----HgG---~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~l 304 (355)
+|+|..+ +|+.+++ ++. .-| -++++||+++|+|+|+... ......+++ -+.|+.+. +.+++
T Consensus 301 g~~~~~~~~~~l~~aDv--~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~----~~~~eiv~~-~~~G~lv~--d~~~l 371 (415)
T cd03816 301 PWLSAEDYPKLLASADL--GVSLHTSSSGLDLPMKVVDMFGCGLPVCALDF----KCIDELVKH-GENGLVFG--DSEEL 371 (415)
T ss_pred CcCCHHHHHHHHHhCCE--EEEccccccccCCcHHHHHHHHcCCCEEEeCC----CCHHHHhcC-CCCEEEEC--CHHHH
Confidence 6888655 5677777 653 112 3579999999999999643 245566665 47888874 78999
Q ss_pred HHHHHHHhcC---ch-hHHHHHHHHHHH
Q 018483 305 KKAIKRLMVD---TE-GKEMRKKAIHLK 328 (355)
Q Consensus 305 ~~ai~~~l~~---~~-~~~~~~~a~~l~ 328 (355)
.++|.++++| ++ ...|++++++.+
T Consensus 372 a~~i~~ll~~~~~~~~~~~m~~~~~~~~ 399 (415)
T cd03816 372 AEQLIDLLSNFPNRGKLNSLKKGAQEES 399 (415)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHhh
Confidence 9999999998 55 667777777766
No 88
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=97.47 E-value=0.0026 Score=59.94 Aligned_cols=110 Identities=12% Similarity=0.030 Sum_probs=70.8
Q ss_pred CceeecCCh-HhhhhcccCCcee--ec--cCchhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEecccCHHHHH
Q 018483 231 GCIVEWAPQ-KEVLANDAVGGFW--SH--CGWNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFEGGTIK 305 (355)
Q Consensus 231 ~~~~~~~pq-~~~L~~~~~~~~I--~H--gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~l~ 305 (355)
+.+.++..+ ..+++.+++ +| ++ |-.++++||+++|+|+|+-... .+...+++ -..|..++.-+.+++.
T Consensus 257 v~~~g~~~~~~~~~~~adi--~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~----g~~e~i~~-~~~g~~~~~~d~~~la 329 (374)
T TIGR03088 257 VWLPGERDDVPALMQALDL--FVLPSLAEGISNTILEAMASGLPVIATAVG----GNPELVQH-GVTGALVPPGDAVALA 329 (374)
T ss_pred EEEcCCcCCHHHHHHhcCE--EEeccccccCchHHHHHHHcCCCEEEcCCC----CcHHHhcC-CCceEEeCCCCHHHHH
Confidence 344444333 457888887 55 33 3457999999999999996643 34556655 3567777767889999
Q ss_pred HHHHHHhcCch-hHHHHHHHHHHHHHHhhhhhcCCChHHHHHHHHHHHHc
Q 018483 306 KAIKRLMVDTE-GKEMRKKAIHLKEKVELPLKEGGSCYNSLNDLVKKILS 354 (355)
Q Consensus 306 ~ai~~~l~~~~-~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~l~~ 354 (355)
++|.+++++++ ...+.+++++.. .+.-+.....+++.+..++
T Consensus 330 ~~i~~l~~~~~~~~~~~~~a~~~~-------~~~fs~~~~~~~~~~~y~~ 372 (374)
T TIGR03088 330 RALQPYVSDPAARRAHGAAGRARA-------EQQFSINAMVAAYAGLYDQ 372 (374)
T ss_pred HHHHHHHhCHHHHHHHHHHHHHHH-------HHhCCHHHHHHHHHHHHHH
Confidence 99999998843 333444444332 2344566666666665543
No 89
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=97.44 E-value=0.026 Score=54.38 Aligned_cols=79 Identities=19% Similarity=0.203 Sum_probs=53.6
Q ss_pred CCCCceeecCChHh---hhhcccCCceee-----ccCchhHHHHhhcCCcEEeccccCchhhhHHHHh---hhhcceeEe
Q 018483 228 GERGCIVEWAPQKE---VLANDAVGGFWS-----HCGWNSTLESICEGVPMLCKPFFGDQNLNMRYVC---DVWNVGLEL 296 (355)
Q Consensus 228 ~~~~~~~~~~pq~~---~L~~~~~~~~I~-----HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~---~~~g~g~~l 296 (355)
.+++.+.+++|+.+ +|+.+++ +|+ |-| .++.||+++|+|+|+.-..+. ....++ . -..|...
T Consensus 304 ~~~V~f~g~v~~~~l~~~l~~adv--~v~~s~~E~Fg-i~~lEAMa~G~pvIa~~~ggp---~~~iv~~~~~-g~~G~l~ 376 (419)
T cd03806 304 EDKVEFVVNAPFEELLEELSTASI--GLHTMWNEHFG-IGVVEYMAAGLIPLAHASGGP---LLDIVVPWDG-GPTGFLA 376 (419)
T ss_pred CCeEEEecCCCHHHHHHHHHhCeE--EEECCccCCcc-cHHHHHHHcCCcEEEEcCCCC---chheeeccCC-CCceEEe
Confidence 35667788888764 6677776 443 222 588999999999998653321 112232 3 2567665
Q ss_pred cccCHHHHHHHHHHHhcCc
Q 018483 297 EEFEGGTIKKAIKRLMVDT 315 (355)
Q Consensus 297 ~~~~~~~l~~ai~~~l~~~ 315 (355)
. +.+++.++|.++++++
T Consensus 377 ~--d~~~la~ai~~ll~~~ 393 (419)
T cd03806 377 S--TAEEYAEAIEKILSLS 393 (419)
T ss_pred C--CHHHHHHHHHHHHhCC
Confidence 3 8999999999999864
No 90
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=97.43 E-value=0.0012 Score=62.10 Aligned_cols=99 Identities=15% Similarity=0.118 Sum_probs=68.8
Q ss_pred CCCceeecCCh-HhhhhcccCCceeecc--CchhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEecccCHHHHH
Q 018483 229 ERGCIVEWAPQ-KEVLANDAVGGFWSHC--GWNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFEGGTIK 305 (355)
Q Consensus 229 ~~~~~~~~~pq-~~~L~~~~~~~~I~Hg--G~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~l~ 305 (355)
+++.+.++.++ ..++..+++-++.++. ...+++||+++|+|+|+..... .....+.+ -..|..++.-+.+++.
T Consensus 261 ~~v~~~g~~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~---g~~~~v~~-~~~G~lv~~~d~~~la 336 (372)
T cd04949 261 DYVFLKGYTRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNY---GPSEIIED-GENGYLVPKGDIEALA 336 (372)
T ss_pred ceEEEcCCCCCHHHHHhhhhEEEecccccccChHHHHHHhCCCCEEEecCCC---CcHHHccc-CCCceEeCCCcHHHHH
Confidence 34455566555 3577888885555553 3569999999999999964321 23455555 3678887777899999
Q ss_pred HHHHHHhcCch-hHHHHHHHHHHHHHH
Q 018483 306 KAIKRLMVDTE-GKEMRKKAIHLKEKV 331 (355)
Q Consensus 306 ~ai~~~l~~~~-~~~~~~~a~~l~~~~ 331 (355)
++|.++++|++ ...+.+++++.++.+
T Consensus 337 ~~i~~ll~~~~~~~~~~~~a~~~~~~~ 363 (372)
T cd04949 337 EAIIELLNDPKLLQKFSEAAYENAERY 363 (372)
T ss_pred HHHHHHHcCHHHHHHHHHHHHHHHHHh
Confidence 99999999864 556666666665444
No 91
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=97.36 E-value=0.032 Score=56.92 Aligned_cols=109 Identities=18% Similarity=0.112 Sum_probs=68.4
Q ss_pred CCCceeecCCh-HhhhhcccCCceee---ccCc-hhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEec--ccCH
Q 018483 229 ERGCIVEWAPQ-KEVLANDAVGGFWS---HCGW-NSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELE--EFEG 301 (355)
Q Consensus 229 ~~~~~~~~~pq-~~~L~~~~~~~~I~---HgG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~--~~~~ 301 (355)
+++.+.+|.++ ..++..+++ ||. +.|. ++++||+++|+|+|+.... .....+.+ -..|+.++ +.+.
T Consensus 574 ~~V~flG~~~dv~~ll~aaDv--~VlpS~~Egfp~vlLEAMA~G~PVVat~~g----G~~EiV~d-g~~GlLv~~~d~~~ 646 (694)
T PRK15179 574 ERILFTGLSRRVGYWLTQFNA--FLLLSRFEGLPNVLIEAQFSGVPVVTTLAG----GAGEAVQE-GVTGLTLPADTVTA 646 (694)
T ss_pred CcEEEcCCcchHHHHHHhcCE--EEeccccccchHHHHHHHHcCCeEEEECCC----ChHHHccC-CCCEEEeCCCCCCh
Confidence 55677788765 346777777 553 4554 7999999999999997642 34555655 25788887 5666
Q ss_pred HHHHHHHHHHhcCch-hHHHHHHHHHHHHHHhhhhhcCCChHHHHHHHHHH
Q 018483 302 GTIKKAIKRLMVDTE-GKEMRKKAIHLKEKVELPLKEGGSCYNSLNDLVKK 351 (355)
Q Consensus 302 ~~l~~ai~~~l~~~~-~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~ 351 (355)
+++.+++.+++.+.. .+.+++++++... +.-+....++++++.
T Consensus 647 ~~La~aL~~ll~~l~~~~~l~~~ar~~a~-------~~FS~~~~~~~~~~l 690 (694)
T PRK15179 647 PDVAEALARIHDMCAADPGIARKAADWAS-------ARFSLNQMIASTVRC 690 (694)
T ss_pred HHHHHHHHHHHhChhccHHHHHHHHHHHH-------HhCCHHHHHHHHHHH
Confidence 677777766664321 1456665544432 234455555555544
No 92
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=97.34 E-value=0.0054 Score=57.00 Aligned_cols=109 Identities=13% Similarity=0.067 Sum_probs=66.1
Q ss_pred CCCceeecCCh-HhhhhcccCCceeec----cCchhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEecccCHHH
Q 018483 229 ERGCIVEWAPQ-KEVLANDAVGGFWSH----CGWNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFEGGT 303 (355)
Q Consensus 229 ~~~~~~~~~pq-~~~L~~~~~~~~I~H----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~ 303 (355)
+++.+.++..+ ..++..+++ +|.- |..++++||+++|+|+|+. |...+...+++ .|..+..-+.++
T Consensus 245 ~~v~~~g~~~~~~~~~~~ad~--~v~~s~~e~~~~~~~Ea~a~G~PvI~~----~~~~~~e~i~~---~g~~~~~~~~~~ 315 (360)
T cd04951 245 NRVKLLGLRDDIAAYYNAADL--FVLSSAWEGFGLVVAEAMACELPVVAT----DAGGVREVVGD---SGLIVPISDPEA 315 (360)
T ss_pred CcEEEecccccHHHHHHhhce--EEecccccCCChHHHHHHHcCCCEEEe----cCCChhhEecC---CceEeCCCCHHH
Confidence 44566666654 457788887 5442 2257899999999999974 34445555543 344444567889
Q ss_pred HHHHHHHHhcCchhHHHHHHHHHHHHHHhhhhhcCCChHHHHHHHHHHH
Q 018483 304 IKKAIKRLMVDTEGKEMRKKAIHLKEKVELPLKEGGSCYNSLNDLVKKI 352 (355)
Q Consensus 304 l~~ai~~~l~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~l 352 (355)
+.++|.++++++ +.+++...+-++.+. +.-+-....+++.+..
T Consensus 316 ~~~~i~~ll~~~--~~~~~~~~~~~~~~~----~~~s~~~~~~~~~~~y 358 (360)
T cd04951 316 LANKIDEILKMS--GEERDIIGARRERIV----KKFSINSIVQQWLTLY 358 (360)
T ss_pred HHHHHHHHHhCC--HHHHHHHHHHHHHHH----HhcCHHHHHHHHHHHh
Confidence 999999998442 344443333233333 3344555555555543
No 93
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=97.30 E-value=0.0043 Score=58.77 Aligned_cols=92 Identities=14% Similarity=0.121 Sum_probs=63.7
Q ss_pred CCCCceeecCChHh---hhhcccCCceeec---cC-chhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEecccC
Q 018483 228 GERGCIVEWAPQKE---VLANDAVGGFWSH---CG-WNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFE 300 (355)
Q Consensus 228 ~~~~~~~~~~pq~~---~L~~~~~~~~I~H---gG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~ 300 (355)
.+++.+.+++|+.+ ++..+++ ++.. -| ..+++||+++|+|+|+.-.. .....+.+ -+.|...+. +
T Consensus 279 ~~~V~f~g~~~~~~~~~~l~~ad~--~l~~s~~E~~g~~~lEAma~G~PvI~s~~~----~~~e~i~~-~~~g~~~~~-~ 350 (392)
T cd03805 279 EDQVIFLPSISDSQKELLLSSARA--LLYTPSNEHFGIVPLEAMYAGKPVIACNSG----GPLETVVD-GETGFLCEP-T 350 (392)
T ss_pred CceEEEeCCCChHHHHHHHhhCeE--EEECCCcCCCCchHHHHHHcCCCEEEECCC----CcHHHhcc-CCceEEeCC-C
Confidence 35667889998764 5677776 5532 12 35789999999999997433 23345555 356776654 7
Q ss_pred HHHHHHHHHHHhcCch-hHHHHHHHHHH
Q 018483 301 GGTIKKAIKRLMVDTE-GKEMRKKAIHL 327 (355)
Q Consensus 301 ~~~l~~ai~~~l~~~~-~~~~~~~a~~l 327 (355)
.+++.++|.+++++++ ..++++++++.
T Consensus 351 ~~~~a~~i~~l~~~~~~~~~~~~~a~~~ 378 (392)
T cd03805 351 PEEFAEAMLKLANDPDLADRMGAAGRKR 378 (392)
T ss_pred HHHHHHHHHHHHhChHHHHHHHHHHHHH
Confidence 8999999999999864 45566665554
No 94
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=97.29 E-value=0.0069 Score=56.15 Aligned_cols=91 Identities=18% Similarity=0.264 Sum_probs=57.8
Q ss_pred CCCCceeecCChH---hhhhcccCCceee--ccCchhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEecccCHH
Q 018483 228 GERGCIVEWAPQK---EVLANDAVGGFWS--HCGWNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFEGG 302 (355)
Q Consensus 228 ~~~~~~~~~~pq~---~~L~~~~~~~~I~--HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~ 302 (355)
.+++.+.+|+|+. .+++.+++-++-+ -|..+++.||+++|+|+|+....+ ....+. ..|..+..-+.+
T Consensus 252 ~~~v~~~g~~~~~~~~~~~~~~d~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~----~~e~~~---~~~~~~~~~~~~ 324 (365)
T cd03809 252 GDRVRFLGYVSDEELAALYRGARAFVFPSLYEGFGLPVLEAMACGTPVIASNISS----LPEVAG---DAALYFDPLDPE 324 (365)
T ss_pred CCeEEECCCCChhHHHHHHhhhhhhcccchhccCCCCHHHHhcCCCcEEecCCCC----ccceec---CceeeeCCCCHH
Confidence 3455777999876 4667777622222 233468999999999999865421 122222 235555555789
Q ss_pred HHHHHHHHHhcCch-hHHHHHHHH
Q 018483 303 TIKKAIKRLMVDTE-GKEMRKKAI 325 (355)
Q Consensus 303 ~l~~ai~~~l~~~~-~~~~~~~a~ 325 (355)
++.++|.++++|++ ...+.++++
T Consensus 325 ~~~~~i~~l~~~~~~~~~~~~~~~ 348 (365)
T cd03809 325 ALAAAIERLLEDPALREELRERGL 348 (365)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHH
Confidence 99999999998844 333444443
No 95
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=97.27 E-value=0.0057 Score=56.81 Aligned_cols=151 Identities=15% Similarity=0.085 Sum_probs=85.4
Q ss_pred CCceEEEeeccccc-cCHHHHHHHHHHHHhC--CCCEEEEEcCCCcCCCCcccCCChhhh---h--hcCCCCceeecCCh
Q 018483 168 PKSVIYVSFGSIAS-IDEKELLETAWGLANC--EQPFLWVVRPGLVRGSNCLELLPINFQ---D--SVGERGCIVEWAPQ 239 (355)
Q Consensus 168 ~~~~v~vs~GS~~~-~~~~~~~~~~~~l~~~--~~~~i~~~~~~~~~~~~~~~~lp~~~~---~--~~~~~~~~~~~~pq 239 (355)
++..+++..|.... ...+.+-+.+..+.+. +.++++ +|..... ......+. . ...+++.+.+|.++
T Consensus 183 ~~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~~~~~~l~i-vG~~~~~-----~~~~~~~~~~~~~~~~~~~v~~~g~~~~ 256 (355)
T cd03819 183 KGKPVILLPGRLTRWKGQEVFIEALARLKKDDPDVHLLI-VGDAQGR-----RFYYAELLELIKRLGLQDRVTFVGHCSD 256 (355)
T ss_pred CCceEEEEeeccccccCHHHHHHHHHHHHhcCCCeEEEE-EECCccc-----chHHHHHHHHHHHcCCcceEEEcCCccc
Confidence 34556667777664 3345555555555553 344443 3332100 00111111 1 11244566677543
Q ss_pred -HhhhhcccCCceee--ccC-chhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEecccCHHHHHHHHHHHhc-C
Q 018483 240 -KEVLANDAVGGFWS--HCG-WNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFEGGTIKKAIKRLMV-D 314 (355)
Q Consensus 240 -~~~L~~~~~~~~I~--HgG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~l~~ai~~~l~-~ 314 (355)
..+++.+++-++-+ +-| .++++||+++|+|+|+.-.. .....+.+ -+.|..++.-+.+++.++|.+++. +
T Consensus 257 ~~~~l~~ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~----~~~e~i~~-~~~g~~~~~~~~~~l~~~i~~~~~~~ 331 (355)
T cd03819 257 MPAAYALADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHG----GARETVRP-GETGLLVPPGDAEALAQALDQILSLL 331 (355)
T ss_pred HHHHHHhCCEEEecCCCCCCCchHHHHHHhcCCCEEEcCCC----CcHHHHhC-CCceEEeCCCCHHHHHHHHHHHHhhC
Confidence 45777788733333 123 36999999999999986532 34455654 357888777789999999965553 5
Q ss_pred ch-hHHHHHHHHHHHH
Q 018483 315 TE-GKEMRKKAIHLKE 329 (355)
Q Consensus 315 ~~-~~~~~~~a~~l~~ 329 (355)
++ ..+++++|++..+
T Consensus 332 ~~~~~~~~~~a~~~~~ 347 (355)
T cd03819 332 PEGRAKMFAKARMCVE 347 (355)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 43 5556666666554
No 96
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=97.23 E-value=0.0049 Score=56.37 Aligned_cols=80 Identities=18% Similarity=0.154 Sum_probs=54.6
Q ss_pred CCCceeecCCh-HhhhhcccCCceee--c--cCchhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEecccCHHH
Q 018483 229 ERGCIVEWAPQ-KEVLANDAVGGFWS--H--CGWNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFEGGT 303 (355)
Q Consensus 229 ~~~~~~~~~pq-~~~L~~~~~~~~I~--H--gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~ 303 (355)
+++.+.+|.++ ..++..+++ +|. + |..++++||+++|+|+|+.... .....+.+ -+.|...+.-+.+.
T Consensus 246 ~~v~~~g~~~~~~~~~~~~d~--~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~----~~~e~i~~-~~~g~~~~~~~~~~ 318 (353)
T cd03811 246 DRVHFLGFQSNPYPYLKAADL--FVLSSRYEGFPNVLLEAMALGTPVVATDCP----GPREILED-GENGLLVPVGDEAA 318 (353)
T ss_pred ccEEEecccCCHHHHHHhCCE--EEeCcccCCCCcHHHHHHHhCCCEEEcCCC----ChHHHhcC-CCceEEECCCCHHH
Confidence 44566677665 357777777 553 2 3357899999999999986433 45566766 47888887667777
Q ss_pred H---HHHHHHHhcCc
Q 018483 304 I---KKAIKRLMVDT 315 (355)
Q Consensus 304 l---~~ai~~~l~~~ 315 (355)
+ .+++.+++.++
T Consensus 319 ~~~~~~~i~~~~~~~ 333 (353)
T cd03811 319 LAAAALALLDLLLDP 333 (353)
T ss_pred HHHHHHHHHhccCCh
Confidence 7 55566666663
No 97
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=97.21 E-value=0.012 Score=57.80 Aligned_cols=112 Identities=13% Similarity=0.100 Sum_probs=73.4
Q ss_pred CCCceeecCChHhhhhcccCCceee---ccC-chhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEec-c---cC
Q 018483 229 ERGCIVEWAPQKEVLANDAVGGFWS---HCG-WNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELE-E---FE 300 (355)
Q Consensus 229 ~~~~~~~~~pq~~~L~~~~~~~~I~---HgG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~-~---~~ 300 (355)
+++.+.++.+...++..+++ ||. .=| ..+++||+++|+|+|+.-.. ..+...++. -..|..++ . -+
T Consensus 376 ~~V~f~G~~~~~~~~~~adv--~v~pS~~Egfgl~~lEAma~G~PVI~~dv~---~G~~eiI~~-g~nG~lv~~~~~~~d 449 (500)
T TIGR02918 376 DYIHLKGHRNLSEVYKDYEL--YLSASTSEGFGLTLMEAVGSGLGMIGFDVN---YGNPTFIED-NKNGYLIPIDEEEDD 449 (500)
T ss_pred CeEEEcCCCCHHHHHHhCCE--EEEcCccccccHHHHHHHHhCCCEEEecCC---CCCHHHccC-CCCEEEEeCCccccc
Confidence 44566677777788888887 553 233 46999999999999997542 124455554 24677765 2 22
Q ss_pred ----HHHHHHHHHHHhcCchhHHHHHHHHHHHHHHhhhhhcCCChHHHHHHHHHHHHc
Q 018483 301 ----GGTIKKAIKRLMVDTEGKEMRKKAIHLKEKVELPLKEGGSCYNSLNDLVKKILS 354 (355)
Q Consensus 301 ----~~~l~~ai~~~l~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~l~~ 354 (355)
.++++++|.++++++....+.++|.+.++.+ +....++.+.+.+++
T Consensus 450 ~~~~~~~la~~I~~ll~~~~~~~~~~~a~~~a~~f--------s~~~v~~~w~~ll~~ 499 (500)
T TIGR02918 450 EDQIITALAEKIVEYFNSNDIDAFHEYSYQIAEGF--------LTANIIEKWKKLVRE 499 (500)
T ss_pred hhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHhc--------CHHHHHHHHHHHHhh
Confidence 7789999999996533556777776655544 345556555555543
No 98
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=97.19 E-value=0.0019 Score=51.35 Aligned_cols=79 Identities=24% Similarity=0.253 Sum_probs=47.9
Q ss_pred CCCceeecCCh-HhhhhcccCCceeec--cC-chhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEecccCHHHH
Q 018483 229 ERGCIVEWAPQ-KEVLANDAVGGFWSH--CG-WNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFEGGTI 304 (355)
Q Consensus 229 ~~~~~~~~~pq-~~~L~~~~~~~~I~H--gG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~l 304 (355)
.++.+.+|++. .++++.+++.+..+. .| .+++.|++++|+|+|+.+. ......+. .+.|..+ .-+.+++
T Consensus 53 ~~v~~~g~~~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~-----~~~~~~~~-~~~~~~~-~~~~~~l 125 (135)
T PF13692_consen 53 PNVRFHGFVEELPEILAAADVGLIPSRFNEGFPNKLLEAMAAGKPVIASDN-----GAEGIVEE-DGCGVLV-ANDPEEL 125 (135)
T ss_dssp CTEEEE-S-HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHH-----HCHCHS----SEEEE--TT-HHHH
T ss_pred CCEEEcCCHHHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhCCCEEECCc-----chhhheee-cCCeEEE-CCCHHHH
Confidence 46678888864 347788888555442 23 4899999999999999875 12223333 3677666 6689999
Q ss_pred HHHHHHHhcC
Q 018483 305 KKAIKRLMVD 314 (355)
Q Consensus 305 ~~ai~~~l~~ 314 (355)
.++|.++++|
T Consensus 126 ~~~i~~l~~d 135 (135)
T PF13692_consen 126 AEAIERLLND 135 (135)
T ss_dssp HHHHHHHHH-
T ss_pred HHHHHHHhcC
Confidence 9999998865
No 99
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=97.16 E-value=0.019 Score=54.83 Aligned_cols=108 Identities=17% Similarity=0.095 Sum_probs=69.7
Q ss_pred CCCceeecCChH-hhhhcccCCcee--ec--cCc-hhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEecccCHH
Q 018483 229 ERGCIVEWAPQK-EVLANDAVGGFW--SH--CGW-NSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFEGG 302 (355)
Q Consensus 229 ~~~~~~~~~pq~-~~L~~~~~~~~I--~H--gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~ 302 (355)
.++.+.+++++. .+++.+++ +| ++ .|. +.+.||+++|+|+|+.+...+. ..+. -|.|..+. -+.+
T Consensus 280 ~~V~~~G~v~~~~~~~~~adv--~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~~-----i~~~-~~~g~lv~-~~~~ 350 (397)
T TIGR03087 280 PGVTVTGSVADVRPYLAHAAV--AVAPLRIARGIQNKVLEAMAMAKPVVASPEAAEG-----IDAL-PGAELLVA-ADPA 350 (397)
T ss_pred CCeEEeeecCCHHHHHHhCCE--EEecccccCCcccHHHHHHHcCCCEEecCccccc-----cccc-CCcceEeC-CCHH
Confidence 455777888863 46777777 55 33 354 4699999999999998753322 1122 25676665 6889
Q ss_pred HHHHHHHHHhcCch-hHHHHHHHHHHHHHHhhhhhcCCChHHHHHHHHHHH
Q 018483 303 TIKKAIKRLMVDTE-GKEMRKKAIHLKEKVELPLKEGGSCYNSLNDLVKKI 352 (355)
Q Consensus 303 ~l~~ai~~~l~~~~-~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~l 352 (355)
++.++|.++++|++ ...+.+++++... +.-+-....+.+.+.+
T Consensus 351 ~la~ai~~ll~~~~~~~~~~~~ar~~v~-------~~fsw~~~~~~~~~~l 394 (397)
T TIGR03087 351 DFAAAILALLANPAEREELGQAARRRVL-------QHYHWPRNLARLDALL 394 (397)
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHH-------HhCCHHHHHHHHHHHh
Confidence 99999999999854 4445555554432 2334445555555544
No 100
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=97.15 E-value=0.0034 Score=58.46 Aligned_cols=111 Identities=14% Similarity=0.240 Sum_probs=77.6
Q ss_pred CCCceeecCChHhhhhc--ccCCceeecc-------C------chhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcce
Q 018483 229 ERGCIVEWAPQKEVLAN--DAVGGFWSHC-------G------WNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVG 293 (355)
Q Consensus 229 ~~~~~~~~~pq~~~L~~--~~~~~~I~Hg-------G------~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g 293 (355)
+|+.+.+|+|+.++..+ .+.+++...- . -+-+.+.+++|+|+|+.+ +...+..+++ -++|
T Consensus 207 ~~V~f~G~~~~eel~~~l~~~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~----~~~~~~~V~~-~~~G 281 (333)
T PRK09814 207 ANISYKGWFDPEELPNELSKGFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWS----KAAIADFIVE-NGLG 281 (333)
T ss_pred CCeEEecCCCHHHHHHHHhcCcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECC----CccHHHHHHh-CCce
Confidence 45578899998875432 1333332211 1 123778899999999964 4567788887 5999
Q ss_pred eEecccCHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHhhhhhcCCChHHHHHHHHHH
Q 018483 294 LELEEFEGGTIKKAIKRLMVDTEGKEMRKKAIHLKEKVELPLKEGGSCYNSLNDLVKK 351 (355)
Q Consensus 294 ~~l~~~~~~~l~~ai~~~l~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~ 351 (355)
+.++ +.+++.+++.++ .+++..+|++|++++++.++ .|.--..++++++..
T Consensus 282 ~~v~--~~~el~~~l~~~-~~~~~~~m~~n~~~~~~~~~----~g~~~~~~~~~~~~~ 332 (333)
T PRK09814 282 FVVD--SLEELPEIIDNI-TEEEYQEMVENVKKISKLLR----NGYFTKKALVDAIKE 332 (333)
T ss_pred EEeC--CHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHh----cchhHHHHHHHHHhc
Confidence 9986 567888888875 34446789999999999999 466666677666543
No 101
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=97.11 E-value=0.0021 Score=60.12 Aligned_cols=132 Identities=17% Similarity=0.204 Sum_probs=76.5
Q ss_pred CCCceEEEeeccccccC----HHHHHHHHHHHHhC-CCCEEEEEcCCCcCCCCcccCCChhhhhhcCCCCceeecCCh--
Q 018483 167 APKSVIYVSFGSIASID----EKELLETAWGLANC-EQPFLWVVRPGLVRGSNCLELLPINFQDSVGERGCIVEWAPQ-- 239 (355)
Q Consensus 167 ~~~~~v~vs~GS~~~~~----~~~~~~~~~~l~~~-~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~pq-- 239 (355)
.+++.+++++=...... ...+.+++++|.+. ++++||.+....... ..+ .....+. +|+.+.+-+++
T Consensus 178 ~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~~~~~vi~~~hn~p~~~----~~i-~~~l~~~-~~v~~~~~l~~~~ 251 (346)
T PF02350_consen 178 APKPYILVTLHPVTNEDNPERLEQILEALKALAERQNVPVIFPLHNNPRGS----DII-IEKLKKY-DNVRLIEPLGYEE 251 (346)
T ss_dssp TTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHHTTEEEEEE--S-HHHH----HHH-HHHHTT--TTEEEE----HHH
T ss_pred cCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhcCCCcEEEEecCCchHH----HHH-HHHhccc-CCEEEECCCCHHH
Confidence 56889999985444433 34566677777766 788999887432111 001 1111222 35677766655
Q ss_pred -HhhhhcccCCceeeccCchhHH-HHhhcCCcEEeccccCchhhhHHHHhhhhcceeEecccCHHHHHHHHHHHhcC
Q 018483 240 -KEVLANDAVGGFWSHCGWNSTL-ESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFEGGTIKKAIKRLMVD 314 (355)
Q Consensus 240 -~~~L~~~~~~~~I~HgG~~s~~-eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~l~~ai~~~l~~ 314 (355)
..+|.++++ +|+-.| ++. ||.+.|+|.|.+ -|+...-.-.. .|..+.+ ..+.++|.+++++++++
T Consensus 252 ~l~ll~~a~~--vvgdSs--GI~eEa~~lg~P~v~i---R~~geRqe~r~--~~~nvlv-~~~~~~I~~ai~~~l~~ 318 (346)
T PF02350_consen 252 YLSLLKNADL--VVGDSS--GIQEEAPSLGKPVVNI---RDSGERQEGRE--RGSNVLV-GTDPEAIIQAIEKALSD 318 (346)
T ss_dssp HHHHHHHESE--EEESSH--HHHHHGGGGT--EEEC---SSS-S-HHHHH--TTSEEEE-TSSHHHHHHHHHHHHH-
T ss_pred HHHHHhcceE--EEEcCc--cHHHHHHHhCCeEEEe---cCCCCCHHHHh--hcceEEe-CCCHHHHHHHHHHHHhC
Confidence 457788887 999999 666 999999999999 33333222232 2555443 58899999999999976
No 102
>PLN02275 transferase, transferring glycosyl groups
Probab=97.09 E-value=0.14 Score=48.31 Aligned_cols=74 Identities=15% Similarity=0.195 Sum_probs=51.5
Q ss_pred CCcee-ecCChHhh---hhcccCCceee-c-----cC-chhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEecc
Q 018483 230 RGCIV-EWAPQKEV---LANDAVGGFWS-H-----CG-WNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEE 298 (355)
Q Consensus 230 ~~~~~-~~~pq~~~---L~~~~~~~~I~-H-----gG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~ 298 (355)
++.+. .|+|+.++ ++.+++ ||. + -| -++++||+++|+|+|+... ..+...+++ -+.|..++
T Consensus 287 ~v~~~~~~~~~~~~~~~l~~aDv--~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~----gg~~eiv~~-g~~G~lv~- 358 (371)
T PLN02275 287 HVAFRTMWLEAEDYPLLLGSADL--GVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSY----SCIGELVKD-GKNGLLFS- 358 (371)
T ss_pred ceEEEcCCCCHHHHHHHHHhCCE--EEEeccccccccccHHHHHHHHCCCCEEEecC----CChHHHccC-CCCeEEEC-
Confidence 33444 47887664 777777 663 1 12 3589999999999999753 235666765 36898876
Q ss_pred cCHHHHHHHHHHHh
Q 018483 299 FEGGTIKKAIKRLM 312 (355)
Q Consensus 299 ~~~~~l~~ai~~~l 312 (355)
+.+++.++|.+++
T Consensus 359 -~~~~la~~i~~l~ 371 (371)
T PLN02275 359 -SSSELADQLLELL 371 (371)
T ss_pred -CHHHHHHHHHHhC
Confidence 5788888887764
No 103
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=97.08 E-value=0.011 Score=57.90 Aligned_cols=92 Identities=17% Similarity=0.185 Sum_probs=60.8
Q ss_pred CCCceeecCChHhhhhcccCCceeec----cCchhHHHHhhcCCcEEeccccCchhhhHHHHhhh----h-cceeEeccc
Q 018483 229 ERGCIVEWAPQKEVLANDAVGGFWSH----CGWNSTLESICEGVPMLCKPFFGDQNLNMRYVCDV----W-NVGLELEEF 299 (355)
Q Consensus 229 ~~~~~~~~~pq~~~L~~~~~~~~I~H----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~----~-g~g~~l~~~ 299 (355)
+++.+.+...-.+++..+++ +|.- |--++++||+++|+|+|+-. .......+.+. + ..|..++.-
T Consensus 354 ~~V~f~G~~~v~~~l~~aDv--~vlpS~~Eg~p~~vlEAma~G~PVVatd----~g~~~elv~~~~~~~~g~~G~lv~~~ 427 (475)
T cd03813 354 DNVKFTGFQNVKEYLPKLDV--LVLTSISEGQPLVILEAMAAGIPVVATD----VGSCRELIEGADDEALGPAGEVVPPA 427 (475)
T ss_pred CeEEEcCCccHHHHHHhCCE--EEeCchhhcCChHHHHHHHcCCCEEECC----CCChHHHhcCCcccccCCceEEECCC
Confidence 44556664445567777776 5432 33479999999999999953 33344444431 1 267777777
Q ss_pred CHHHHHHHHHHHhcCch-hHHHHHHHHH
Q 018483 300 EGGTIKKAIKRLMVDTE-GKEMRKKAIH 326 (355)
Q Consensus 300 ~~~~l~~ai~~~l~~~~-~~~~~~~a~~ 326 (355)
+.+++.++|.++++|++ ..++.+++++
T Consensus 428 d~~~la~ai~~ll~~~~~~~~~~~~a~~ 455 (475)
T cd03813 428 DPEALARAILRLLKDPELRRAMGEAGRK 455 (475)
T ss_pred CHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 89999999999999854 4445444443
No 104
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=97.06 E-value=0.01 Score=56.61 Aligned_cols=78 Identities=14% Similarity=0.164 Sum_probs=52.9
Q ss_pred CCCceeecCChHh---hhhcccCCceee---ccCc-hhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEecccCH
Q 018483 229 ERGCIVEWAPQKE---VLANDAVGGFWS---HCGW-NSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFEG 301 (355)
Q Consensus 229 ~~~~~~~~~pq~~---~L~~~~~~~~I~---HgG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~ 301 (355)
+++.+.+|+|+.+ +++.+++ +|. +-|. .++.||+++|+|+|+-+..+ ....+.+ |.+.. ..-+.
T Consensus 250 ~~v~~~G~~~~~~~~~~l~~ad~--~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg----~~e~i~~--~~~~~-~~~~~ 320 (398)
T cd03796 250 DRVELLGAVPHERVRDVLVQGHI--FLNTSLTEAFCIAIVEAASCGLLVVSTRVGG----IPEVLPP--DMILL-AEPDV 320 (398)
T ss_pred CeEEEeCCCCHHHHHHHHHhCCE--EEeCChhhccCHHHHHHHHcCCCEEECCCCC----chhheeC--Cceee-cCCCH
Confidence 4567789998654 6667776 553 2243 49999999999999977643 2334433 43322 33378
Q ss_pred HHHHHHHHHHhcCc
Q 018483 302 GTIKKAIKRLMVDT 315 (355)
Q Consensus 302 ~~l~~ai~~~l~~~ 315 (355)
+++.+++.+++++.
T Consensus 321 ~~l~~~l~~~l~~~ 334 (398)
T cd03796 321 ESIVRKLEEAISIL 334 (398)
T ss_pred HHHHHHHHHHHhCh
Confidence 99999999999763
No 105
>PF06722 DUF1205: Protein of unknown function (DUF1205); InterPro: IPR010610 This entry represents a conserved region of unknown function within bacterial glycosyl transferases. Many proteins containing this domain are members of the glycosyl transferase family 28 IPR004276 from INTERPRO.; PDB: 3OTH_A 3OTG_A 3OTI_A 3D0R_A 3D0Q_B 2P6P_A 3UYK_A 3UYL_B 3TSA_B 2YJN_A.
Probab=96.80 E-value=0.0021 Score=48.18 Aligned_cols=63 Identities=17% Similarity=0.188 Sum_probs=50.0
Q ss_pred hhhHhhhccCCCceEEEeecccccc---CH--HHHHHHHHHHHhCCCCEEEEEcCCCcCCCCcccCCChhh
Q 018483 158 NCISWLNKQAPKSVIYVSFGSIASI---DE--KELLETAWGLANCEQPFLWVVRPGLVRGSNCLELLPINF 223 (355)
Q Consensus 158 ~~~~~l~~~~~~~~v~vs~GS~~~~---~~--~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~ 223 (355)
.+..|+...+.++.|+||+||.... .. ..+..++++++..+..++..+....... +..+|+|+
T Consensus 29 ~~P~Wl~~~~~RpRVcvT~G~~~~~~~g~~~~~~l~~ll~ala~ldvEvV~a~~~~~~~~---lg~lP~nV 96 (97)
T PF06722_consen 29 VVPDWLLEPPGRPRVCVTLGTSVRMFFGPGGVPLLRRLLEALAGLDVEVVVALPAAQRAE---LGELPDNV 96 (97)
T ss_dssp EEEGGGSSSTSSEEEEEEETHHHCHHHSCHHHCHHHHHHHHHHTSSSEEEEEETTCCCGG---CCS-TTTE
T ss_pred CCCcccccCCCCCEEEEEcCCCccccccccchHHHHHHHHHHhhCCcEEEEECCHHHHHh---hCCCCCCC
Confidence 3678999888999999999999873 22 4789999999999999999998765333 45677775
No 106
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=96.74 E-value=0.037 Score=51.49 Aligned_cols=154 Identities=18% Similarity=0.161 Sum_probs=80.8
Q ss_pred EEeeccccccCHHHHHHHHHHHHhCC--CCEEEEEcCCCcCCCCcccCCChhhh--hhcCCCCceeecCChHh---hhhc
Q 018483 173 YVSFGSIASIDEKELLETAWGLANCE--QPFLWVVRPGLVRGSNCLELLPINFQ--DSVGERGCIVEWAPQKE---VLAN 245 (355)
Q Consensus 173 ~vs~GS~~~~~~~~~~~~~~~l~~~~--~~~i~~~~~~~~~~~~~~~~lp~~~~--~~~~~~~~~~~~~pq~~---~L~~ 245 (355)
++..|+... .+.+..+++++.+.. .+++ .+|..... ..+-+.+. ....+++.+.+++|+.+ ++..
T Consensus 196 i~~~G~~~~--~Kg~~~li~a~~~l~~~~~l~-ivG~~~~~-----~~~~~~~~~~~~~~~~V~~~g~~~~~~~~~~~~~ 267 (363)
T cd04955 196 YLLVGRIVP--ENNIDDLIEAFSKSNSGKKLV-IVGNADHN-----TPYGKLLKEKAAADPRIIFVGPIYDQELLELLRY 267 (363)
T ss_pred EEEEecccc--cCCHHHHHHHHHhhccCceEE-EEcCCCCc-----chHHHHHHHHhCCCCcEEEccccChHHHHHHHHh
Confidence 345677654 234455666666543 4544 44432100 00111111 12235667789998865 4455
Q ss_pred ccCCceeeccCc-----hhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEecccCHHHHHHHHHHHhcCch-hHH
Q 018483 246 DAVGGFWSHCGW-----NSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFEGGTIKKAIKRLMVDTE-GKE 319 (355)
Q Consensus 246 ~~~~~~I~HgG~-----~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~l~~ai~~~l~~~~-~~~ 319 (355)
+++ ++.+.-. +++.||+++|+|+|+....+ +...+.. .|..+..- +.+.++|.+++++++ ...
T Consensus 268 ad~--~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~----~~e~~~~---~g~~~~~~--~~l~~~i~~l~~~~~~~~~ 336 (363)
T cd04955 268 AAL--FYLHGHSVGGTNPSLLEAMAYGCPVLASDNPF----NREVLGD---KAIYFKVG--DDLASLLEELEADPEEVSA 336 (363)
T ss_pred CCE--EEeCCccCCCCChHHHHHHHcCCCEEEecCCc----cceeecC---CeeEecCc--hHHHHHHHHHHhCHHHHHH
Confidence 555 5544322 58999999999999875432 1222222 23333311 129999999998843 223
Q ss_pred HHHHHHHHHHHHhhhhhcCCChHHHHHHHHHHH
Q 018483 320 MRKKAIHLKEKVELPLKEGGSCYNSLNDLVKKI 352 (355)
Q Consensus 320 ~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~l 352 (355)
+.+++++. +.+.-+-....+++++.+
T Consensus 337 ~~~~~~~~-------~~~~fs~~~~~~~~~~~y 362 (363)
T cd04955 337 MAKAARER-------IREKYTWEKIADQYEELY 362 (363)
T ss_pred HHHHHHHH-------HHHhCCHHHHHHHHHHHh
Confidence 33333322 223445556666666544
No 107
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=96.72 E-value=0.018 Score=53.53 Aligned_cols=80 Identities=14% Similarity=0.051 Sum_probs=54.6
Q ss_pred CCCceeecCCh-HhhhhcccCCceeec----cCchhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEecccCHHH
Q 018483 229 ERGCIVEWAPQ-KEVLANDAVGGFWSH----CGWNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFEGGT 303 (355)
Q Consensus 229 ~~~~~~~~~pq-~~~L~~~~~~~~I~H----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~ 303 (355)
+++.+.++..+ ..++..+++ +|.- |-.++++||+++|+|+|+-...+ ....+.. +.|.....-+.++
T Consensus 249 ~~v~~~g~~~~~~~~~~~adi--~v~ps~~E~~~~~~lEAma~G~PvI~s~~~~----~~~~i~~--~~~~~~~~~~~~~ 320 (358)
T cd03812 249 DKVIFLGVRNDVPELLQAMDV--FLFPSLYEGLPLVLIEAQASGLPCILSDTIT----KEVDLTD--LVKFLSLDESPEI 320 (358)
T ss_pred CcEEEecccCCHHHHHHhcCE--EEecccccCCCHHHHHHHHhCCCEEEEcCCc----hhhhhcc--CccEEeCCCCHHH
Confidence 44566666444 457777777 4432 44589999999999999865543 2334433 4555544556899
Q ss_pred HHHHHHHHhcCch
Q 018483 304 IKKAIKRLMVDTE 316 (355)
Q Consensus 304 l~~ai~~~l~~~~ 316 (355)
+.++|.++++|++
T Consensus 321 ~a~~i~~l~~~~~ 333 (358)
T cd03812 321 WAEEILKLKSEDR 333 (358)
T ss_pred HHHHHHHHHhCcc
Confidence 9999999999954
No 108
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=96.70 E-value=0.034 Score=51.64 Aligned_cols=210 Identities=14% Similarity=0.144 Sum_probs=114.7
Q ss_pred ccchHHHHHHHHhhCCCceecC-cccccCCCcCCCCCcccchhhHhhhccCCCceEEEeeccccccCH---HHHHHHHHH
Q 018483 118 FLEQEALTKVQELFSASAFTIG-PFHKLVPTISGSLLKEDTNCISWLNKQAPKSVIYVSFGSIASIDE---KELLETAWG 193 (355)
Q Consensus 118 ~le~~~~~~~r~~~~~~v~~vG-pl~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~---~~~~~~~~~ 193 (355)
-||.++++ + ++-|+.||| |+....+. .+......+-+....+++++.+--||-..--. +.+.+.++.
T Consensus 145 PFE~~~y~---k-~g~~~~yVGHpl~d~i~~-----~~~r~~ar~~l~~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~ 215 (381)
T COG0763 145 PFEPAFYD---K-FGLPCTYVGHPLADEIPL-----LPDREAAREKLGIDADEKTLALLPGSRRSEIRRLLPPFVQAAQE 215 (381)
T ss_pred CCCHHHHH---h-cCCCeEEeCChhhhhccc-----cccHHHHHHHhCCCCCCCeEEEecCCcHHHHHHHHHHHHHHHHH
Confidence 36665433 3 456699999 55554321 11112233444444678899999999876222 233333344
Q ss_pred HHh--CCCCEEEEEcCCCcCCCCcccCCChhhhhhcCCCC-ceeecC-Ch--HhhhhcccCCceeeccCchhHHHHhhcC
Q 018483 194 LAN--CEQPFLWVVRPGLVRGSNCLELLPINFQDSVGERG-CIVEWA-PQ--KEVLANDAVGGFWSHCGWNSTLESICEG 267 (355)
Q Consensus 194 l~~--~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~-~~~~~~-pq--~~~L~~~~~~~~I~HgG~~s~~eal~~G 267 (355)
|.+ .+.+|+..+-... ...+-..+ ...+. ...-++ ++ .+++..+++ .+.-+|. -++|+..+|
T Consensus 216 l~~~~~~~~~vlp~~~~~------~~~~~~~~---~~~~~~~~~~~~~~~~~~~a~~~aD~--al~aSGT-~tLE~aL~g 283 (381)
T COG0763 216 LKARYPDLKFVLPLVNAK------YRRIIEEA---LKWEVAGLSLILIDGEKRKAFAAADA--ALAASGT-ATLEAALAG 283 (381)
T ss_pred HHhhCCCceEEEecCcHH------HHHHHHHH---hhccccCceEEecCchHHHHHHHhhH--HHHhccH-HHHHHHHhC
Confidence 432 3566666543321 00000011 01111 011122 22 235666665 6666664 468999999
Q ss_pred CcEEeccccC-chhhhHHHHhhhhcce----------eEec----ccCHHHHHHHHHHHhcCch-hHHHHHHHHHHHHHH
Q 018483 268 VPMLCKPFFG-DQNLNMRYVCDVWNVG----------LELE----EFEGGTIKKAIKRLMVDTE-GKEMRKKAIHLKEKV 331 (355)
Q Consensus 268 vP~l~~P~~~-DQ~~na~~~~~~~g~g----------~~l~----~~~~~~l~~ai~~~l~~~~-~~~~~~~a~~l~~~~ 331 (355)
+|||+.=-.. =-+.-+++..+ .... +... +.+++.|.+++.+++.|+. ...+++...++...+
T Consensus 284 ~P~Vv~Yk~~~it~~iak~lvk-~~yisLpNIi~~~~ivPEliq~~~~pe~la~~l~~ll~~~~~~~~~~~~~~~l~~~l 362 (381)
T COG0763 284 TPMVVAYKVKPITYFIAKRLVK-LPYVSLPNILAGREIVPELIQEDCTPENLARALEELLLNGDRREALKEKFRELHQYL 362 (381)
T ss_pred CCEEEEEeccHHHHHHHHHhcc-CCcccchHHhcCCccchHHHhhhcCHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHH
Confidence 9999852111 01112333322 1211 1111 5889999999999999964 567888888888887
Q ss_pred hhhhhcCCChHHHHHHHHHHHH
Q 018483 332 ELPLKEGGSCYNSLNDLVKKIL 353 (355)
Q Consensus 332 ~~a~~~~g~~~~~~~~~~~~l~ 353 (355)
+ .++.++.+.+.+++.++
T Consensus 363 ~----~~~~~e~aA~~vl~~~~ 380 (381)
T COG0763 363 R----EDPASEIAAQAVLELLL 380 (381)
T ss_pred c----CCcHHHHHHHHHHHHhc
Confidence 7 45577778888777664
No 109
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=96.70 E-value=0.029 Score=51.61 Aligned_cols=128 Identities=14% Similarity=-0.007 Sum_probs=76.7
Q ss_pred EEEeeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCcCCCCcccCCChhhhhh--cCCCCceeecCChHh---hhhcc
Q 018483 172 IYVSFGSIASIDEKELLETAWGLANCEQPFLWVVRPGLVRGSNCLELLPINFQDS--VGERGCIVEWAPQKE---VLAND 246 (355)
Q Consensus 172 v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~--~~~~~~~~~~~pq~~---~L~~~ 246 (355)
+.+..|.... .+....+++++.+.+.++++.-..... ..+-....+. ..+++.+.+++++.+ +++.+
T Consensus 173 ~i~~~Gr~~~--~Kg~~~li~~~~~~~~~l~i~G~~~~~------~~~~~~~~~~~~~~~~v~~~G~~~~~~~~~~~~~~ 244 (335)
T cd03802 173 YLLFLGRISP--EKGPHLAIRAARRAGIPLKLAGPVSDP------DYFYREIAPELLDGPDIEYLGEVGGAEKAELLGNA 244 (335)
T ss_pred EEEEEEeecc--ccCHHHHHHHHHhcCCeEEEEeCCCCH------HHHHHHHHHhcccCCcEEEeCCCCHHHHHHHHHhC
Confidence 4445566643 344556777887778776654433210 0010111111 245667889998754 56777
Q ss_pred cCCceee--ccC-chhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEecccCHHHHHHHHHHHhcC
Q 018483 247 AVGGFWS--HCG-WNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFEGGTIKKAIKRLMVD 314 (355)
Q Consensus 247 ~~~~~I~--HgG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~l~~ai~~~l~~ 314 (355)
++-++-+ +-| ..++.||+++|+|+|+.... .+...+.+ -..|..++. .+++.++|.+++..
T Consensus 245 d~~v~ps~~~E~~~~~~lEAma~G~PvI~~~~~----~~~e~i~~-~~~g~l~~~--~~~l~~~l~~l~~~ 308 (335)
T cd03802 245 RALLFPILWEEPFGLVMIEAMACGTPVIAFRRG----AVPEVVED-GVTGFLVDS--VEELAAAVARADRL 308 (335)
T ss_pred cEEEeCCcccCCcchHHHHHHhcCCCEEEeCCC----CchhheeC-CCcEEEeCC--HHHHHHHHHHHhcc
Confidence 7733323 234 35899999999999987643 33345544 236776655 88999999888754
No 110
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=96.58 E-value=0.049 Score=53.33 Aligned_cols=165 Identities=15% Similarity=0.093 Sum_probs=87.3
Q ss_pred ceEEEeeccccc-cCHHHHHHHHHHHHhCCCCEEEEEcCCCcCCCCcccCCChhhhhhcCCCCceeecCChH---hhhhc
Q 018483 170 SVIYVSFGSIAS-IDEKELLETAWGLANCEQPFLWVVRPGLVRGSNCLELLPINFQDSVGERGCIVEWAPQK---EVLAN 245 (355)
Q Consensus 170 ~~v~vs~GS~~~-~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~pq~---~~L~~ 245 (355)
..+++..|.... ...+.+.+.+..+.+.+.++++. +.+...- ...+ ..+.++.+.++.+....+.. .+++.
T Consensus 291 ~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~-G~g~~~~---~~~l-~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 365 (473)
T TIGR02095 291 VPLFGVISRLTQQKGVDLLLAALPELLELGGQLVVL-GTGDPEL---EEAL-RELAERYPGNVRVIIGYDEALAHLIYAG 365 (473)
T ss_pred CCEEEEEecCccccChHHHHHHHHHHHHcCcEEEEE-CCCCHHH---HHHH-HHHHHHCCCcEEEEEcCCHHHHHHHHHh
Confidence 345556677665 23344444444444445666554 3321000 0000 11112223444454444543 36667
Q ss_pred ccCCceeec---cCc-hhHHHHhhcCCcEEeccccCchhhhHHHHhh-----hhcceeEecccCHHHHHHHHHHHhc---
Q 018483 246 DAVGGFWSH---CGW-NSTLESICEGVPMLCKPFFGDQNLNMRYVCD-----VWNVGLELEEFEGGTIKKAIKRLMV--- 313 (355)
Q Consensus 246 ~~~~~~I~H---gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~-----~~g~g~~l~~~~~~~l~~ai~~~l~--- 313 (355)
+++ ++.= -|. .+.+||+++|+|.|+-...+ ....+.+ .-+.|+.+..-+.+++.++|.+++.
T Consensus 366 aDv--~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg----~~e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~~~l~~~~ 439 (473)
T TIGR02095 366 ADF--ILMPSRFEPCGLTQLYAMRYGTVPIVRRTGG----LADTVVDGDPEAESGTGFLFEEYDPGALLAALSRALRLYR 439 (473)
T ss_pred CCE--EEeCCCcCCcHHHHHHHHHCCCCeEEccCCC----ccceEecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHHh
Confidence 776 6532 233 48899999999999865432 1122222 0277888887788999999999886
Q ss_pred -CchhHHHHHHHHHHHHHHhhhhhcCCChHHHHHHHHHHHHc
Q 018483 314 -DTEGKEMRKKAIHLKEKVELPLKEGGSCYNSLNDLVKKILS 354 (355)
Q Consensus 314 -~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~l~~ 354 (355)
++ ..+++ ++ ++++.+.-+-....+++++..++
T Consensus 440 ~~~---~~~~~---~~---~~~~~~~fsw~~~a~~~~~~Y~~ 472 (473)
T TIGR02095 440 QDP---SLWEA---LQ---KNAMSQDFSWDKSAKQYVELYRS 472 (473)
T ss_pred cCH---HHHHH---HH---HHHhccCCCcHHHHHHHHHHHHh
Confidence 42 22221 21 12222456666677777776654
No 111
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=96.49 E-value=0.023 Score=55.59 Aligned_cols=137 Identities=20% Similarity=0.248 Sum_probs=86.1
Q ss_pred CCCceEEEeeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCcCCCCcccCCChhhhhh------cCCCCceeecCChH
Q 018483 167 APKSVIYVSFGSIASIDEKELLETAWGLANCEQPFLWVVRPGLVRGSNCLELLPINFQDS------VGERGCIVEWAPQK 240 (355)
Q Consensus 167 ~~~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~------~~~~~~~~~~~pq~ 240 (355)
++.-+||.+|--....+++.++.-++-|...+..++|..+.+.... .+|+.. .++++.+.+-+.-.
T Consensus 756 p~d~vvf~~FNqLyKidP~~l~~W~~ILk~VPnS~LwllrfPa~ge--------~rf~ty~~~~Gl~p~riifs~va~k~ 827 (966)
T KOG4626|consen 756 PEDAVVFCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGE--------QRFRTYAEQLGLEPDRIIFSPVAAKE 827 (966)
T ss_pred CCCeEEEeechhhhcCCHHHHHHHHHHHHhCCcceeEEEeccccch--------HHHHHHHHHhCCCccceeeccccchH
Confidence 4567899999888888999999999999999999999998764221 122110 12343443333221
Q ss_pred -----hhhhcccCCceeeccCchhHHHHhhcCCcEEeccccCchhhhH-HHHhhhhcceeEecccCHHHHHHHHHHHhcC
Q 018483 241 -----EVLANDAVGGFWSHCGWNSTLESICEGVPMLCKPFFGDQNLNM-RYVCDVWNVGLELEEFEGGTIKKAIKRLMVD 314 (355)
Q Consensus 241 -----~~L~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na-~~~~~~~g~g~~l~~~~~~~l~~ai~~~l~~ 314 (355)
-.|+.-.++-+.+. |..|.++.+++|||||.+|.-..-...| -.+.. +|+|..+-.-..|-...+| ++-.|
T Consensus 828 eHvrr~~LaDv~LDTplcn-GhTTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~-~Gl~hliak~~eEY~~iaV-~Latd 904 (966)
T KOG4626|consen 828 EHVRRGQLADVCLDTPLCN-GHTTGMDVLWAGVPMVTMPGETLASRVAASLLTA-LGLGHLIAKNREEYVQIAV-RLATD 904 (966)
T ss_pred HHHHhhhhhhhcccCcCcC-CcccchhhhccCCceeecccHHHHHHHHHHHHHH-cccHHHHhhhHHHHHHHHH-HhhcC
Confidence 12333344446664 6889999999999999999765444444 34444 7888754322233333344 33344
No 112
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=96.46 E-value=0.041 Score=53.45 Aligned_cols=135 Identities=16% Similarity=0.161 Sum_probs=88.2
Q ss_pred CCCceEEEeeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCcCCCCcccCCChhhhhhc------CCCCceeecCChH
Q 018483 167 APKSVIYVSFGSIASIDEKELLETAWGLANCEQPFLWVVRPGLVRGSNCLELLPINFQDSV------GERGCIVEWAPQK 240 (355)
Q Consensus 167 ~~~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~------~~~~~~~~~~pq~ 240 (355)
+++-+||+||+-.....++.+..=++-|...+-.++|..+++.. +.....+++.. +.|.++.+-.|..
T Consensus 427 p~~avVf~c~~n~~K~~pev~~~wmqIL~~vP~Svl~L~~~~~~------~~~~~~l~~la~~~Gv~~eRL~f~p~~~~~ 500 (620)
T COG3914 427 PEDAVVFCCFNNYFKITPEVFALWMQILSAVPNSVLLLKAGGDD------AEINARLRDLAEREGVDSERLRFLPPAPNE 500 (620)
T ss_pred CCCeEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEecCCCc------HHHHHHHHHHHHHcCCChhheeecCCCCCH
Confidence 56789999999999988999988888888889999999877421 11112222111 2344555555543
Q ss_pred hhh-hcccCCceee---ccCchhHHHHhhcCCcEEeccccCchhh--hHHHHhhhhcceeEecccCHHHHHHHHH
Q 018483 241 EVL-ANDAVGGFWS---HCGWNSTLESICEGVPMLCKPFFGDQNL--NMRYVCDVWNVGLELEEFEGGTIKKAIK 309 (355)
Q Consensus 241 ~~L-~~~~~~~~I~---HgG~~s~~eal~~GvP~l~~P~~~DQ~~--na~~~~~~~g~g~~l~~~~~~~l~~ai~ 309 (355)
+-+ .+.-+++|+. -||+.|..|++..|||+|.++ |+||. |+.-+...+|+-..+-.-..+-+++++.
T Consensus 501 ~h~a~~~iADlvLDTyPY~g~TTa~daLwm~vPVlT~~--G~~FasR~~~si~~~agi~e~vA~s~~dYV~~av~ 573 (620)
T COG3914 501 DHRARYGIADLVLDTYPYGGHTTASDALWMGVPVLTRV--GEQFASRNGASIATNAGIPELVADSRADYVEKAVA 573 (620)
T ss_pred HHHHhhchhheeeecccCCCccchHHHHHhcCceeeec--cHHHHHhhhHHHHHhcCCchhhcCCHHHHHHHHHH
Confidence 222 2222333654 699999999999999999997 89976 6655544345543332334455677763
No 113
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=96.36 E-value=0.19 Score=47.40 Aligned_cols=110 Identities=17% Similarity=0.151 Sum_probs=67.4
Q ss_pred CCCceeecC--ChH---hhhhcccCCceeecc---C-chhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEeccc
Q 018483 229 ERGCIVEWA--PQK---EVLANDAVGGFWSHC---G-WNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEF 299 (355)
Q Consensus 229 ~~~~~~~~~--pq~---~~L~~~~~~~~I~Hg---G-~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~ 299 (355)
+++.+.++. ++. .+++.+++ |+.-+ | ..++.||+++|+|+|+....+ ....+.+ -..|...+
T Consensus 252 ~~v~~~~~~~~~~~~~~~~~~~ad~--~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~----~~~~i~~-~~~g~~~~-- 322 (372)
T cd03792 252 PDIHVLTLPPVSDLEVNALQRASTV--VLQKSIREGFGLTVTEALWKGKPVIAGPVGG----IPLQIED-GETGFLVD-- 322 (372)
T ss_pred CCeEEEecCCCCHHHHHHHHHhCeE--EEeCCCccCCCHHHHHHHHcCCCEEEcCCCC----chhhccc-CCceEEeC--
Confidence 445566665 443 35666666 76433 2 359999999999999875432 3344544 25676654
Q ss_pred CHHHHHHHHHHHhcCch-hHHHHHHHHHHHHHHhhhhhcCCChHHHHHHHHHHHHc
Q 018483 300 EGGTIKKAIKRLMVDTE-GKEMRKKAIHLKEKVELPLKEGGSCYNSLNDLVKKILS 354 (355)
Q Consensus 300 ~~~~l~~ai~~~l~~~~-~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~l~~ 354 (355)
+.+.+..+|.+++++++ .+++.+++++... +.-+-...++++++.+++
T Consensus 323 ~~~~~a~~i~~ll~~~~~~~~~~~~a~~~~~-------~~~s~~~~~~~~~~~~~~ 371 (372)
T cd03792 323 TVEEAAVRILYLLRDPELRRKMGANAREHVR-------ENFLITRHLKDYLYLISK 371 (372)
T ss_pred CcHHHHHHHHHHHcCHHHHHHHHHHHHHHHH-------HHcCHHHHHHHHHHHHHh
Confidence 45677889999998843 3444455544322 233455666777666654
No 114
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=96.27 E-value=0.19 Score=48.38 Aligned_cols=162 Identities=10% Similarity=0.193 Sum_probs=90.5
Q ss_pred HhhhccCCCceEEEeecccccc------C----HHHHHHHHHHHHhCCCCEEEEEcCCCcC--CCCcccCCChhhhhhcC
Q 018483 161 SWLNKQAPKSVIYVSFGSIASI------D----EKELLETAWGLANCEQPFLWVVRPGLVR--GSNCLELLPINFQDSVG 228 (355)
Q Consensus 161 ~~l~~~~~~~~v~vs~GS~~~~------~----~~~~~~~~~~l~~~~~~~i~~~~~~~~~--~~~~~~~lp~~~~~~~~ 228 (355)
.|+.....+++|-|+.-..... . .+.+.++++.|.+.++++++.-...... ..+ .......+.+..+
T Consensus 226 ~~~~~~~~~~~Vgisvr~~~~~~~~~~~~~~~Y~~~la~~i~~Li~~g~~Vv~lp~~~~~~~~~~d-D~~~~~~l~~~~~ 304 (426)
T PRK10017 226 HWLDVAAQQKTVAITLRELAPFDKRLGTTQQAYEKAFAGVVNRIIDEGYQVIALSTCTGIDSYNKD-DRMVALNLRQHVS 304 (426)
T ss_pred hhhcccccCCEEEEEecccccccccccccHHHHHHHHHHHHHHHHHCCCeEEEEecccCccCCCCc-hHHHHHHHHHhcc
Confidence 4544333456787876544311 1 1334455566666788887664321100 000 0001122223332
Q ss_pred --CCCcee--ecCChH--hhhhcccCCceeeccCchhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeE-ec--cc
Q 018483 229 --ERGCIV--EWAPQK--EVLANDAVGGFWSHCGWNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLE-LE--EF 299 (355)
Q Consensus 229 --~~~~~~--~~~pq~--~~L~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~-l~--~~ 299 (355)
.+..+. .+-|.. .+++++++ +|.. =..++.=|+..|||.+.+++ |+ .....+.+ +|.... ++ ++
T Consensus 305 ~~~~~~vi~~~~~~~e~~~iIs~~dl--~ig~-RlHa~I~a~~~gvP~i~i~Y--~~-K~~~~~~~-lg~~~~~~~~~~l 377 (426)
T PRK10017 305 DPARYHVVMDELNDLEMGKILGACEL--TVGT-RLHSAIISMNFGTPAIAINY--EH-KSAGIMQQ-LGLPEMAIDIRHL 377 (426)
T ss_pred cccceeEecCCCChHHHHHHHhhCCE--EEEe-cchHHHHHHHcCCCEEEeee--hH-HHHHHHHH-cCCccEEechhhC
Confidence 222332 233433 67777775 7653 34578889999999999997 43 33344455 777755 44 88
Q ss_pred CHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHh
Q 018483 300 EGGTIKKAIKRLMVDTEGKEMRKKAIHLKEKVE 332 (355)
Q Consensus 300 ~~~~l~~ai~~~l~~~~~~~~~~~a~~l~~~~~ 332 (355)
+.+++.+.+.++++|. +.+++..++..++++
T Consensus 378 ~~~~Li~~v~~~~~~r--~~~~~~l~~~v~~~r 408 (426)
T PRK10017 378 LDGSLQAMVADTLGQL--PALNARLAEAVSRER 408 (426)
T ss_pred CHHHHHHHHHHHHhCH--HHHHHHHHHHHHHHH
Confidence 9999999999999886 445554444444444
No 115
>PHA01633 putative glycosyl transferase group 1
Probab=96.24 E-value=0.15 Score=47.35 Aligned_cols=101 Identities=16% Similarity=0.101 Sum_probs=60.7
Q ss_pred CCCcee---ecCChH---hhhhcccCCceeec---cC-chhHHHHhhcCCcEEeccc------cCch------hhhHHHH
Q 018483 229 ERGCIV---EWAPQK---EVLANDAVGGFWSH---CG-WNSTLESICEGVPMLCKPF------FGDQ------NLNMRYV 286 (355)
Q Consensus 229 ~~~~~~---~~~pq~---~~L~~~~~~~~I~H---gG-~~s~~eal~~GvP~l~~P~------~~DQ------~~na~~~ 286 (355)
+++.+. +++++. .+++.+++ |+.- =| -.+++||+++|+|+|+--. .+|+ ..+....
T Consensus 201 ~~V~f~g~~G~~~~~dl~~~y~~aDi--fV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~ 278 (335)
T PHA01633 201 ANVHFVAEFGHNSREYIFAFYGAMDF--TIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVEEY 278 (335)
T ss_pred CcEEEEecCCCCCHHHHHHHHHhCCE--EEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHHHh
Confidence 344665 455554 45666776 6642 23 4689999999999998633 2343 2333332
Q ss_pred hh-hhcceeEecccCHHHHHHHHHHHhcCchhHHHHHHHHHHHHHH
Q 018483 287 CD-VWNVGLELEEFEGGTIKKAIKRLMVDTEGKEMRKKAIHLKEKV 331 (355)
Q Consensus 287 ~~-~~g~g~~l~~~~~~~l~~ai~~~l~~~~~~~~~~~a~~l~~~~ 331 (355)
.+ .-|.|..++..+++++.++|.+++...+.+....++++.++.+
T Consensus 279 ~~~~~g~g~~~~~~d~~~la~ai~~~~~~~~~~~~~~~~~~~a~~f 324 (335)
T PHA01633 279 YDKEHGQKWKIHKFQIEDMANAIILAFELQDREERSMKLKELAKKY 324 (335)
T ss_pred cCcccCceeeecCCCHHHHHHHHHHHHhccChhhhhHHHHHHHHhc
Confidence 22 1367777778999999999999854422123333444444433
No 116
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=96.12 E-value=0.2 Score=49.42 Aligned_cols=113 Identities=20% Similarity=0.180 Sum_probs=67.2
Q ss_pred CCCceeecCCh-HhhhhcccCCceee---ccC-chhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEecccCHHH
Q 018483 229 ERGCIVEWAPQ-KEVLANDAVGGFWS---HCG-WNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFEGGT 303 (355)
Q Consensus 229 ~~~~~~~~~pq-~~~L~~~~~~~~I~---HgG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~ 303 (355)
+++.+.+|..+ ..+++.+++ ||. +-| .+++.||+++|+|+|+... ..+...+.+ -..|..++.-+.+.
T Consensus 455 d~V~FlG~~~Dv~~~LaaADV--fVlPS~~EGfp~vlLEAMA~GlPVVATdv----GG~~EiV~d-G~nG~LVp~~D~~a 527 (578)
T PRK15490 455 ERILFVGASRDVGYWLQKMNV--FILFSRYEGLPNVLIEAQMVGVPVISTPA----GGSAECFIE-GVSGFILDDAQTVN 527 (578)
T ss_pred CcEEECCChhhHHHHHHhCCE--EEEcccccCccHHHHHHHHhCCCEEEeCC----CCcHHHccc-CCcEEEECCCChhh
Confidence 55667777544 346777777 764 234 4799999999999998764 345566665 36788887444455
Q ss_pred HHHHHH---HHhcCchhHHHHHHHHHHHHHHhhhhhcCCChHHHHHHHHHHHHc
Q 018483 304 IKKAIK---RLMVDTEGKEMRKKAIHLKEKVELPLKEGGSCYNSLNDLVKKILS 354 (355)
Q Consensus 304 l~~ai~---~~l~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~l~~ 354 (355)
+.+++. ++... .+....+++..++.+.+.-+....+++..+.+.+
T Consensus 528 La~ai~lA~aL~~l------l~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 528 LDQACRYAEKLVNL------WRSRTGICQQTQSFLQERFTVEHMVGTFVKTIAS 575 (578)
T ss_pred HHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHh
Confidence 555442 22222 1111223333333333556677777777776653
No 117
>PRK14098 glycogen synthase; Provisional
Probab=96.07 E-value=0.12 Score=50.79 Aligned_cols=166 Identities=10% Similarity=-0.003 Sum_probs=86.2
Q ss_pred eEEEeeccccc-cCHHHHHHHHHHHHhCCCCEEEEEcCCCcCCCCcccCCChhhhhhcCCCCceeecCChH---hhhhcc
Q 018483 171 VIYVSFGSIAS-IDEKELLETAWGLANCEQPFLWVVRPGLVRGSNCLELLPINFQDSVGERGCIVEWAPQK---EVLAND 246 (355)
Q Consensus 171 ~v~vs~GS~~~-~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~pq~---~~L~~~ 246 (355)
.++...|.... ...+.+.+.+..+.+.+.+++.. +.+.... ...+ ....++.++++.+...++.. .+++.+
T Consensus 308 ~~i~~vgRl~~~KG~d~li~a~~~l~~~~~~lviv-G~G~~~~---~~~l-~~l~~~~~~~V~~~g~~~~~~~~~~~a~a 382 (489)
T PRK14098 308 PLVGVIINFDDFQGAELLAESLEKLVELDIQLVIC-GSGDKEY---EKRF-QDFAEEHPEQVSVQTEFTDAFFHLAIAGL 382 (489)
T ss_pred CEEEEeccccccCcHHHHHHHHHHHHhcCcEEEEE-eCCCHHH---HHHH-HHHHHHCCCCEEEEEecCHHHHHHHHHhC
Confidence 45555666654 23344444444444445655544 4321000 0011 11112234566677777764 467777
Q ss_pred cCCceeecc---Cc-hhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEecccCHHHHHHHHHHHh---cCchhHH
Q 018483 247 AVGGFWSHC---GW-NSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFEGGTIKKAIKRLM---VDTEGKE 319 (355)
Q Consensus 247 ~~~~~I~Hg---G~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~l~~ai~~~l---~~~~~~~ 319 (355)
++ |+.-+ |. .+.+||+.+|+|.|+....+-...-....++ -+.|..++.-+.+++.++|.+++ +++ +.
T Consensus 383 Di--~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~~~-~~~G~l~~~~d~~~la~ai~~~l~~~~~~--~~ 457 (489)
T PRK14098 383 DM--LLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSED-KGSGFIFHDYTPEALVAKLGEALALYHDE--ER 457 (489)
T ss_pred CE--EEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeecCCCC-CCceeEeCCCCHHHHHHHHHHHHHHHcCH--HH
Confidence 76 66432 22 4789999999998887653311110011112 26788887778999999999876 342 12
Q ss_pred HHHHHHHHHHHHhhhhhcCCChHHHHHHHHHHHH
Q 018483 320 MRKKAIHLKEKVELPLKEGGSCYNSLNDLVKKIL 353 (355)
Q Consensus 320 ~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~l~ 353 (355)
++ +..++++.+.-+-....+++++..+
T Consensus 458 ~~-------~~~~~~~~~~fsw~~~a~~y~~lY~ 484 (489)
T PRK14098 458 WE-------ELVLEAMERDFSWKNSAEEYAQLYR 484 (489)
T ss_pred HH-------HHHHHHhcCCCChHHHHHHHHHHHH
Confidence 21 1122223345555666666665543
No 118
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=95.99 E-value=0.3 Score=46.14 Aligned_cols=78 Identities=17% Similarity=0.115 Sum_probs=51.2
Q ss_pred CCCceeecCChHh---hhhcccCCcee------eccCc-hhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEecc
Q 018483 229 ERGCIVEWAPQKE---VLANDAVGGFW------SHCGW-NSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEE 298 (355)
Q Consensus 229 ~~~~~~~~~pq~~---~L~~~~~~~~I------~HgG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~ 298 (355)
+|+.+.+++|+.+ .++++++.++- +.++. +.+.|++++|+|+|..++ ....+. .+ |..+..
T Consensus 254 ~nV~~~G~~~~~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~-------~~~~~~-~~-~~~~~~ 324 (373)
T cd04950 254 PNVHYLGPKPYKELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPL-------PEVRRY-ED-EVVLIA 324 (373)
T ss_pred CCEEEeCCCCHHHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCCCEEecCc-------HHHHhh-cC-cEEEeC
Confidence 5668889998665 56777773321 22332 469999999999998763 222322 23 333333
Q ss_pred cCHHHHHHHHHHHhcCc
Q 018483 299 FEGGTIKKAIKRLMVDT 315 (355)
Q Consensus 299 ~~~~~l~~ai~~~l~~~ 315 (355)
-+.+++.++|.+++.++
T Consensus 325 ~d~~~~~~ai~~~l~~~ 341 (373)
T cd04950 325 DDPEEFVAAIEKALLED 341 (373)
T ss_pred CCHHHHHHHHHHHHhcC
Confidence 47999999999977553
No 119
>PHA01630 putative group 1 glycosyl transferase
Probab=95.96 E-value=0.2 Score=46.65 Aligned_cols=112 Identities=10% Similarity=0.045 Sum_probs=62.9
Q ss_pred cCChHh---hhhcccCCcee--ec-cC-chhHHHHhhcCCcEEeccccC--chhh---hHHHHhhh----------hcce
Q 018483 236 WAPQKE---VLANDAVGGFW--SH-CG-WNSTLESICEGVPMLCKPFFG--DQNL---NMRYVCDV----------WNVG 293 (355)
Q Consensus 236 ~~pq~~---~L~~~~~~~~I--~H-gG-~~s~~eal~~GvP~l~~P~~~--DQ~~---na~~~~~~----------~g~g 293 (355)
++|+.+ +++.+++ |+ ++ .| ..++.||+++|+|+|+.-..+ |.-. |+..+... .++|
T Consensus 197 ~v~~~~l~~~y~~aDv--~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G 274 (331)
T PHA01630 197 PLPDDDIYSLFAGCDI--LFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVG 274 (331)
T ss_pred cCCHHHHHHHHHhCCE--EEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccccccCCcccc
Confidence 366544 5677776 54 33 22 468999999999999976533 3221 22111100 1245
Q ss_pred eEecccCHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHhhhhhcCCChHHHHHHHHHHHHc
Q 018483 294 LELEEFEGGTIKKAIKRLMVDTEGKEMRKKAIHLKEKVELPLKEGGSCYNSLNDLVKKILS 354 (355)
Q Consensus 294 ~~l~~~~~~~l~~ai~~~l~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~l~~ 354 (355)
..++ .+.+++.+++.+++.|.+.+.++++...-+...+ +.-+-....+++.+.+++
T Consensus 275 ~~v~-~~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~----~~fs~~~ia~k~~~l~~~ 330 (331)
T PHA01630 275 YFLD-PDIEDAYQKLLEALANWTPEKKKENLEGRAILYR----ENYSYNAIAKMWEKILEK 330 (331)
T ss_pred cccC-CCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHH----HhCCHHHHHHHHHHHHhc
Confidence 4433 3567777778788876311233433333333333 355667777778777765
No 120
>PLN02501 digalactosyldiacylglycerol synthase
Probab=95.58 E-value=1.4 Score=44.76 Aligned_cols=74 Identities=12% Similarity=0.131 Sum_probs=49.0
Q ss_pred ceeecCChH-hhhhcccCCceee----ccCchhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEecccCHHHHHH
Q 018483 232 CIVEWAPQK-EVLANDAVGGFWS----HCGWNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFEGGTIKK 306 (355)
Q Consensus 232 ~~~~~~pq~-~~L~~~~~~~~I~----HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~l~~ 306 (355)
.+.++.++. ++++..++ ||. =|=.++++||+++|+|+|+.-..+... +.. -+.|.. .-+.+++.+
T Consensus 604 ~FLG~~dd~~~lyasaDV--FVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~e~-----V~~-g~nGll--~~D~EafAe 673 (794)
T PLN02501 604 NFLKGRDHADDSLHGYKV--FINPSISDVLCTATAEALAMGKFVVCADHPSNEF-----FRS-FPNCLT--YKTSEDFVA 673 (794)
T ss_pred EecCCCCCHHHHHHhCCE--EEECCCcccchHHHHHHHHcCCCEEEecCCCCce-----Eee-cCCeEe--cCCHHHHHH
Confidence 344566654 47777776 654 223479999999999999987654321 322 133332 246889999
Q ss_pred HHHHHhcCc
Q 018483 307 AIKRLMVDT 315 (355)
Q Consensus 307 ai~~~l~~~ 315 (355)
+|.++|.++
T Consensus 674 AI~~LLsd~ 682 (794)
T PLN02501 674 KVKEALANE 682 (794)
T ss_pred HHHHHHhCc
Confidence 999999885
No 121
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=95.56 E-value=0.22 Score=48.69 Aligned_cols=135 Identities=11% Similarity=0.078 Sum_probs=72.3
Q ss_pred CceEEEeeccccc-cCHHHHHHHHHHHHhCCCCEEEEEcCCCcCCCCcccCCChhhh---hhcCCCCceeecCChH---h
Q 018483 169 KSVIYVSFGSIAS-IDEKELLETAWGLANCEQPFLWVVRPGLVRGSNCLELLPINFQ---DSVGERGCIVEWAPQK---E 241 (355)
Q Consensus 169 ~~~v~vs~GS~~~-~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~---~~~~~~~~~~~~~pq~---~ 241 (355)
+..+++..|.... ...+.+.+.+..+.+.+.++++.-.+.. ...+.+. ++..+++.+..-.++. .
T Consensus 295 ~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~G~g~~--------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 366 (476)
T cd03791 295 DAPLFGFVGRLTEQKGIDLLLEALPELLELGGQLVILGSGDP--------EYEEALRELAARYPGRVAVLIGYDEALAHL 366 (476)
T ss_pred CCCEEEEEeeccccccHHHHHHHHHHHHHcCcEEEEEecCCH--------HHHHHHHHHHHhCCCcEEEEEeCCHHHHHH
Confidence 3445666677664 2334444444444444555555432210 0111111 1123444544333332 3
Q ss_pred hhhcccCCceeec---cCc-hhHHHHhhcCCcEEeccccC--chhhhHHHHhhhhcceeEecccCHHHHHHHHHHHhcC
Q 018483 242 VLANDAVGGFWSH---CGW-NSTLESICEGVPMLCKPFFG--DQNLNMRYVCDVWNVGLELEEFEGGTIKKAIKRLMVD 314 (355)
Q Consensus 242 ~L~~~~~~~~I~H---gG~-~s~~eal~~GvP~l~~P~~~--DQ~~na~~~~~~~g~g~~l~~~~~~~l~~ai~~~l~~ 314 (355)
+++.+++ ++.- -|. .+.+||+++|+|+|+....+ |.-.+.....+ -|.|..+..-+.+++.++|.++++.
T Consensus 367 ~~~~aDv--~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~-~~~G~~~~~~~~~~l~~~i~~~l~~ 442 (476)
T cd03791 367 IYAGADF--FLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTG-EGTGFVFEGYNADALLAALRRALAL 442 (476)
T ss_pred HHHhCCE--EECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCC-CCCeEEeCCCCHHHHHHHHHHHHHH
Confidence 5666666 6532 122 47899999999999876532 22211111112 3589888877899999999998853
No 122
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=95.52 E-value=0.15 Score=37.54 Aligned_cols=82 Identities=15% Similarity=0.161 Sum_probs=51.4
Q ss_pred ccCchhHHHHhhcCCcEEeccccCchhhhHHHHhhhhc-ceeEecccCHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHh
Q 018483 254 HCGWNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWN-VGLELEEFEGGTIKKAIKRLMVDTEGKEMRKKAIHLKEKVE 332 (355)
Q Consensus 254 HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g-~g~~l~~~~~~~l~~ai~~~l~~~~~~~~~~~a~~l~~~~~ 332 (355)
+|-..-+.|++++|+|+|.-+. ......+.+ | -++.. . +.+++.++|..+++|++ ..++-+++-.+.++
T Consensus 9 ~~~~~r~~E~~a~G~~vi~~~~----~~~~~~~~~--~~~~~~~-~-~~~el~~~i~~ll~~~~--~~~~ia~~a~~~v~ 78 (92)
T PF13524_consen 9 DGPNMRIFEAMACGTPVISDDS----PGLREIFED--GEHIITY-N-DPEELAEKIEYLLENPE--ERRRIAKNARERVL 78 (92)
T ss_pred CCCchHHHHHHHCCCeEEECCh----HHHHHHcCC--CCeEEEE-C-CHHHHHHHHHHHHCCHH--HHHHHHHHHHHHHH
Confidence 4556689999999999999764 223333322 3 33333 3 89999999999999953 33333444444444
Q ss_pred hhhhcCCChHHHHHHHH
Q 018483 333 LPLKEGGSCYNSLNDLV 349 (355)
Q Consensus 333 ~a~~~~g~~~~~~~~~~ 349 (355)
+.-+....+++|+
T Consensus 79 ----~~~t~~~~~~~il 91 (92)
T PF13524_consen 79 ----KRHTWEHRAEQIL 91 (92)
T ss_pred ----HhCCHHHHHHHHH
Confidence 3445555555554
No 123
>PRK00654 glgA glycogen synthase; Provisional
Probab=95.28 E-value=0.33 Score=47.42 Aligned_cols=70 Identities=14% Similarity=0.208 Sum_probs=46.4
Q ss_pred hhhhcccCCceee---ccCc-hhHHHHhhcCCcEEeccccC--chhhhHHHHhhhhcceeEecccCHHHHHHHHHHHhc
Q 018483 241 EVLANDAVGGFWS---HCGW-NSTLESICEGVPMLCKPFFG--DQNLNMRYVCDVWNVGLELEEFEGGTIKKAIKRLMV 313 (355)
Q Consensus 241 ~~L~~~~~~~~I~---HgG~-~s~~eal~~GvP~l~~P~~~--DQ~~na~~~~~~~g~g~~l~~~~~~~l~~ai~~~l~ 313 (355)
.+++.+++ |+. +-|. .+.+||+++|+|.|+....+ |.-.+...-.+ -+.|..++.-+.+++.++|.++++
T Consensus 352 ~~~~~aDv--~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~-~~~G~lv~~~d~~~la~~i~~~l~ 427 (466)
T PRK00654 352 RIYAGADM--FLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDG-EATGFVFDDFNAEDLLRALRRALE 427 (466)
T ss_pred HHHhhCCE--EEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCC-CCceEEeCCCCHHHHHHHHHHHHH
Confidence 45677776 653 2344 48999999999999865432 21111111122 277888887788999999999885
No 124
>PLN02316 synthase/transferase
Probab=94.99 E-value=0.45 Score=50.50 Aligned_cols=116 Identities=9% Similarity=0.016 Sum_probs=69.4
Q ss_pred CCCceeecCChH---hhhhcccCCceeec----cCchhHHHHhhcCCcEEeccccC--chhhh-------HHHHhhhhcc
Q 018483 229 ERGCIVEWAPQK---EVLANDAVGGFWSH----CGWNSTLESICEGVPMLCKPFFG--DQNLN-------MRYVCDVWNV 292 (355)
Q Consensus 229 ~~~~~~~~~pq~---~~L~~~~~~~~I~H----gG~~s~~eal~~GvP~l~~P~~~--DQ~~n-------a~~~~~~~g~ 292 (355)
+++.+....+.. .+++.+++ |+.- +=-.+.+||+++|+|.|+-...+ |.-.. +..... -+.
T Consensus 900 ~rV~f~g~~de~lah~iyaaADi--flmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~-~~t 976 (1036)
T PLN02316 900 DRARLCLTYDEPLSHLIYAGADF--ILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGL-EPN 976 (1036)
T ss_pred CeEEEEecCCHHHHHHHHHhCcE--EEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhcccccccccccccccc-CCc
Confidence 344444344443 46666666 7632 22358999999999988865432 22111 111111 156
Q ss_pred eeEecccCHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHhhhhhcCCChHHHHHHHHHHH
Q 018483 293 GLELEEFEGGTIKKAIKRLMVDTEGKEMRKKAIHLKEKVELPLKEGGSCYNSLNDLVKKI 352 (355)
Q Consensus 293 g~~l~~~~~~~l~~ai~~~l~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~l 352 (355)
|..++..+++.|..+|.+++.+ |.+....+++..++++...-|-...+++.++..
T Consensus 977 Gflf~~~d~~aLa~AL~raL~~-----~~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~~LY 1031 (1036)
T PLN02316 977 GFSFDGADAAGVDYALNRAISA-----WYDGRDWFNSLCKRVMEQDWSWNRPALDYMELY 1031 (1036)
T ss_pred eEEeCCCCHHHHHHHHHHHHhh-----hhhhHHHHHHHHHHHHHhhCCHHHHHHHHHHHH
Confidence 8888888899999999999965 444444455555555555555555665555443
No 125
>PRK10125 putative glycosyl transferase; Provisional
Probab=94.92 E-value=0.78 Score=43.99 Aligned_cols=101 Identities=11% Similarity=-0.058 Sum_probs=58.5
Q ss_pred HHHHHHHHHHHhCCCC-EEEEEcCCCcCCCCcccCCChhhhhhcCCCCceeecC-Ch---HhhhhcccCCceee----cc
Q 018483 185 KELLETAWGLANCEQP-FLWVVRPGLVRGSNCLELLPINFQDSVGERGCIVEWA-PQ---KEVLANDAVGGFWS----HC 255 (355)
Q Consensus 185 ~~~~~~~~~l~~~~~~-~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~-pq---~~~L~~~~~~~~I~----Hg 255 (355)
+....+++++...+.. -++.+|... ...+.++ ...++. ++ ..+++.+++ ||. -|
T Consensus 256 Kg~~~li~A~~~l~~~~~L~ivG~g~-------~~~~~~v--------~~~g~~~~~~~l~~~y~~aDv--fV~pS~~Eg 318 (405)
T PRK10125 256 KTDQQLVREMMALGDKIELHTFGKFS-------PFTAGNV--------VNHGFETDKRKLMSALNQMDA--LVFSSRVDN 318 (405)
T ss_pred ccHHHHHHHHHhCCCCeEEEEEcCCC-------cccccce--------EEecCcCCHHHHHHHHHhCCE--EEECCcccc
Confidence 4456688888776443 345555421 0011111 333443 22 234445565 654 23
Q ss_pred CchhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEecccCHHHHHHHH
Q 018483 256 GWNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFEGGTIKKAI 308 (355)
Q Consensus 256 G~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~l~~ai 308 (355)
--++++||+++|+|+|+....+ ....+ +. +.|..++.-+.++|++++
T Consensus 319 fp~vilEAmA~G~PVVat~~gG----~~Eiv-~~-~~G~lv~~~d~~~La~~~ 365 (405)
T PRK10125 319 YPLILCEALSIGVPVIATHSDA----AREVL-QK-SGGKTVSEEEVLQLAQLS 365 (405)
T ss_pred CcCHHHHHHHcCCCEEEeCCCC----hHHhE-eC-CcEEEECCCCHHHHHhcc
Confidence 3478999999999999987654 22334 33 578888766777887654
No 126
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=94.85 E-value=0.33 Score=45.80 Aligned_cols=130 Identities=15% Similarity=0.148 Sum_probs=76.5
Q ss_pred CCceEEEeecccc--c-cCHHHHHHHHHHHHhCCCCEEEEEcCCCcCCCCcccCCChhhhhhc--CCCCceeecCC---h
Q 018483 168 PKSVIYVSFGSIA--S-IDEKELLETAWGLANCEQPFLWVVRPGLVRGSNCLELLPINFQDSV--GERGCIVEWAP---Q 239 (355)
Q Consensus 168 ~~~~v~vs~GS~~--~-~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~--~~~~~~~~~~p---q 239 (355)
+++.++|.+=... . ...+.+.++++++.+.+.++++.+.... .+. ..+-+.+.+.. .+++.+.+-++ .
T Consensus 200 ~~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~~~~~~vi~P~~~-p~~---~~i~~~i~~~~~~~~~v~l~~~l~~~~~ 275 (365)
T TIGR03568 200 DKPYALVTFHPVTLEKESAEEQIKELLKALDELNKNYIFTYPNAD-AGS---RIINEAIEEYVNEHPNFRLFKSLGQERY 275 (365)
T ss_pred CCCEEEEEeCCCcccccCchHHHHHHHHHHHHhccCCEEEEeCCC-CCc---hHHHHHHHHHhcCCCCEEEECCCChHHH
Confidence 3468778775543 2 4467899999999887766666553221 110 00011111111 24556665444 4
Q ss_pred HhhhhcccCCceeeccCchhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEecccCHHHHHHHHHHHh
Q 018483 240 KEVLANDAVGGFWSHCGWNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFEGGTIKKAIKRLM 312 (355)
Q Consensus 240 ~~~L~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~l~~ai~~~l 312 (355)
..++.++++ +||-++.+- .||.+.|||.|.+- +-+ .-+ + .|..+.+-..+.++|.+++.+++
T Consensus 276 l~Ll~~a~~--vitdSSggi-~EA~~lg~Pvv~l~---~R~---e~~-~-~g~nvl~vg~~~~~I~~a~~~~~ 337 (365)
T TIGR03568 276 LSLLKNADA--VIGNSSSGI-IEAPSFGVPTINIG---TRQ---KGR-L-RADSVIDVDPDKEEIVKAIEKLL 337 (365)
T ss_pred HHHHHhCCE--EEEcChhHH-HhhhhcCCCEEeec---CCc---hhh-h-hcCeEEEeCCCHHHHHHHHHHHh
Confidence 457778887 998775544 99999999999773 211 111 2 23332211678899999999854
No 127
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=94.51 E-value=0.35 Score=44.48 Aligned_cols=169 Identities=15% Similarity=0.124 Sum_probs=87.4
Q ss_pred ccCcEEEEcCccccchHHHHHHHHhhCCC-ceecCcccccCCCcCCCCCccc-chhhHhhhccCCCceEEEeec-cccc-
Q 018483 106 KKCSALIVNTVDFLEQEALTKVQELFSAS-AFTIGPFHKLVPTISGSLLKED-TNCISWLNKQAPKSVIYVSFG-SIAS- 181 (355)
Q Consensus 106 ~~~~~~l~nt~~~le~~~~~~~r~~~~~~-v~~vGpl~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~v~vs~G-S~~~- 181 (355)
...|++++..|..+.. +++ +...|+++.-.+. .+.+. ..+..-+... +++.+-|-.| ....
T Consensus 96 ~~FDlvi~p~HD~~~~----------~~Nvl~t~ga~~~i~~~----~l~~a~~~~~~~~~~l-~~p~~avLIGG~s~~~ 160 (311)
T PF06258_consen 96 RPFDLVIVPEHDRLPR----------GPNVLPTLGAPNRITPE----RLAEAAAAWAPRLAAL-PRPRVAVLIGGDSKHY 160 (311)
T ss_pred cccCEEEECcccCcCC----------CCceEecccCCCcCCHH----HHHHHHHhhhhhhccC-CCCeEEEEECcCCCCc
Confidence 4568888888875421 144 6788888876542 11111 1122223332 3444444444 3333
Q ss_pred -cCHHHHHHHHHHH----HhCCCCEEEEEcCCCcCCCCcccCCChhhhhhcCCCCce--e---ecCChHhhhhcccCCce
Q 018483 182 -IDEKELLETAWGL----ANCEQPFLWVVRPGLVRGSNCLELLPINFQDSVGERGCI--V---EWAPQKEVLANDAVGGF 251 (355)
Q Consensus 182 -~~~~~~~~~~~~l----~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~--~---~~~pq~~~L~~~~~~~~ 251 (355)
++.+....+++.+ +..+..++......+... .-.-+.+.......+ . +.=|...+|+.++. ++
T Consensus 161 ~~~~~~~~~l~~~l~~~~~~~~~~~~vttSRRTp~~------~~~~L~~~~~~~~~~~~~~~~~~nPy~~~La~ad~-i~ 233 (311)
T PF06258_consen 161 RWDEEDAERLLDQLAALAAAYGGSLLVTTSRRTPPE------AEAALRELLKDNPGVYIWDGTGENPYLGFLAAADA-IV 233 (311)
T ss_pred ccCHHHHHHHHHHHHHHHHhCCCeEEEEcCCCCcHH------HHHHHHHhhcCCCceEEecCCCCCcHHHHHHhCCE-EE
Confidence 5566444444333 344545554444332110 111111111111122 1 22356778888886 55
Q ss_pred eeccCchhHHHHhhcCCcEEeccccCchhhh---HHHHhhhhcceeEec
Q 018483 252 WSHCGWNSTLESICEGVPMLCKPFFGDQNLN---MRYVCDVWNVGLELE 297 (355)
Q Consensus 252 I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~n---a~~~~~~~g~g~~l~ 297 (355)
||==-.+-+.||+..|+|+.++|+-.-.... ...+++ .|.-..+.
T Consensus 234 VT~DSvSMvsEA~~tG~pV~v~~l~~~~~r~~r~~~~L~~-~g~~r~~~ 281 (311)
T PF06258_consen 234 VTEDSVSMVSEAAATGKPVYVLPLPGRSGRFRRFHQSLEE-RGAVRPFT 281 (311)
T ss_pred EcCccHHHHHHHHHcCCCEEEecCCCcchHHHHHHHHHHH-CCCEEECC
Confidence 6655668899999999999999987621222 234444 46666655
No 128
>PLN02939 transferase, transferring glycosyl groups
Probab=93.56 E-value=0.68 Score=48.56 Aligned_cols=83 Identities=10% Similarity=0.032 Sum_probs=53.5
Q ss_pred CCCceeecCChH---hhhhcccCCceeec----cCchhHHHHhhcCCcEEeccccC--chhhh--HHHHhhhhcceeEec
Q 018483 229 ERGCIVEWAPQK---EVLANDAVGGFWSH----CGWNSTLESICEGVPMLCKPFFG--DQNLN--MRYVCDVWNVGLELE 297 (355)
Q Consensus 229 ~~~~~~~~~pq~---~~L~~~~~~~~I~H----gG~~s~~eal~~GvP~l~~P~~~--DQ~~n--a~~~~~~~g~g~~l~ 297 (355)
+++.+..+.+.. .+++.+++ ||.- +--.+++||+++|+|.|+....+ |.-.+ ...+.+.-+.|..+.
T Consensus 837 drV~FlG~~de~lah~IYAaADI--FLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~ 914 (977)
T PLN02939 837 NNIRLILKYDEALSHSIYAASDM--FIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFL 914 (977)
T ss_pred CeEEEEeccCHHHHHHHHHhCCE--EEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEEec
Confidence 455666777764 46777776 7642 22358999999999999876543 22211 111111125787777
Q ss_pred ccCHHHHHHHHHHHhc
Q 018483 298 EFEGGTIKKAIKRLMV 313 (355)
Q Consensus 298 ~~~~~~l~~ai~~~l~ 313 (355)
.-+.+.+.++|.+++.
T Consensus 915 ~~D~eaLa~AL~rAL~ 930 (977)
T PLN02939 915 TPDEQGLNSALERAFN 930 (977)
T ss_pred CCCHHHHHHHHHHHHH
Confidence 6788889988888764
No 129
>PLN02846 digalactosyldiacylglycerol synthase
Probab=91.52 E-value=7.9 Score=37.76 Aligned_cols=72 Identities=13% Similarity=0.178 Sum_probs=49.5
Q ss_pred eecCChHhhhhcccCCceeec----cCchhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEecccCHHHHHHHHH
Q 018483 234 VEWAPQKEVLANDAVGGFWSH----CGWNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFEGGTIKKAIK 309 (355)
Q Consensus 234 ~~~~pq~~~L~~~~~~~~I~H----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~l~~ai~ 309 (355)
.++.+..+++...++ ||.= +=.++++||+++|+|+|+.-..+ | ..+.+ -+.|... -+.+++.+++.
T Consensus 289 ~G~~~~~~~~~~~Dv--Fv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~----~-~~v~~-~~ng~~~--~~~~~~a~ai~ 358 (462)
T PLN02846 289 PGRDHADPLFHDYKV--FLNPSTTDVVCTTTAEALAMGKIVVCANHPS----N-EFFKQ-FPNCRTY--DDGKGFVRATL 358 (462)
T ss_pred CCCCCHHHHHHhCCE--EEECCCcccchHHHHHHHHcCCcEEEecCCC----c-ceeec-CCceEec--CCHHHHHHHHH
Confidence 355566667877776 7655 33479999999999999975432 2 34433 2445443 36789999999
Q ss_pred HHhcCc
Q 018483 310 RLMVDT 315 (355)
Q Consensus 310 ~~l~~~ 315 (355)
++|.++
T Consensus 359 ~~l~~~ 364 (462)
T PLN02846 359 KALAEE 364 (462)
T ss_pred HHHccC
Confidence 999763
No 130
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=91.48 E-value=1.5 Score=42.66 Aligned_cols=104 Identities=15% Similarity=0.161 Sum_probs=69.2
Q ss_pred ecCChHhh---hhcccCCceee---ccCc-hhHHHHhhcCCc----EEeccccCchhhhHHHHhhhhcceeEecccCHHH
Q 018483 235 EWAPQKEV---LANDAVGGFWS---HCGW-NSTLESICEGVP----MLCKPFFGDQNLNMRYVCDVWNVGLELEEFEGGT 303 (355)
Q Consensus 235 ~~~pq~~~---L~~~~~~~~I~---HgG~-~s~~eal~~GvP----~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~ 303 (355)
..+++.++ ++.+++ |+. +=|. .++.||+++|+| +|+--..+- +.. ++.|+.++..+.++
T Consensus 342 ~~~~~~el~aly~aaDv--~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~----~~~----l~~gllVnP~d~~~ 411 (456)
T TIGR02400 342 RSYDREELMALYRAADV--GLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGA----AQE----LNGALLVNPYDIDG 411 (456)
T ss_pred CCCCHHHHHHHHHhCcE--EEECccccccCccHHHHHHhcCCCCceEEEeCCCCC----hHH----hCCcEEECCCCHHH
Confidence 44566554 555565 664 3465 588899999999 666544432 111 23567777788999
Q ss_pred HHHHHHHHhcCchhHHHHHHHHHHHHHHhhhhhcCCChHHHHHHHHHHHHc
Q 018483 304 IKKAIKRLMVDTEGKEMRKKAIHLKEKVELPLKEGGSCYNSLNDLVKKILS 354 (355)
Q Consensus 304 l~~ai~~~l~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~l~~ 354 (355)
++++|.++++.+. ++-+++.+++.+.+. .-+...-.+++++.|.+
T Consensus 412 lA~aI~~aL~~~~-~er~~r~~~~~~~v~-----~~~~~~W~~~~l~~l~~ 456 (456)
T TIGR02400 412 MADAIARALTMPL-EEREERHRAMMDKLR-----KNDVQRWREDFLSDLNS 456 (456)
T ss_pred HHHHHHHHHcCCH-HHHHHHHHHHHHHHh-----hCCHHHHHHHHHHHhhC
Confidence 9999999998643 355666666666655 35677777888877753
No 131
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=90.89 E-value=2.2 Score=39.27 Aligned_cols=137 Identities=9% Similarity=0.037 Sum_probs=77.1
Q ss_pred HhhhccCCCceEEEeeccccc---cCHHHHHHHHHHHHhCCCCEEEEEcCCCcCCCCcccCCChhhhhhcCCCCceee--
Q 018483 161 SWLNKQAPKSVIYVSFGSIAS---IDEKELLETAWGLANCEQPFLWVVRPGLVRGSNCLELLPINFQDSVGERGCIVE-- 235 (355)
Q Consensus 161 ~~l~~~~~~~~v~vs~GS~~~---~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~-- 235 (355)
+++....+++.|.+..|+... .+.+.+.++++.|.+.++++++..+.+. + ......+.+..+.. .+.+
T Consensus 171 ~~~~~~~~~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~~~~~vl~~g~~~-e-----~~~~~~i~~~~~~~-~l~g~~ 243 (319)
T TIGR02193 171 AFLGHALPAPYAVLLHATSRDDKTWPEERWRELARLLLARGLQIVLPWGNDA-E-----KQRAERIAEALPGA-VVLPKM 243 (319)
T ss_pred hhhhccCCCCEEEEEeCCCcccCCCCHHHHHHHHHHHHHCCCeEEEeCCCHH-H-----HHHHHHHHhhCCCC-eecCCC
Confidence 344433345666666665333 6789999999999877788776644321 0 00111222111111 2222
Q ss_pred cCCh-HhhhhcccCCceeeccCchhHHHHhhcCCcEEeccccCchhhhHHHHhhhhccee------EecccCHHHHHHHH
Q 018483 236 WAPQ-KEVLANDAVGGFWSHCGWNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGL------ELEEFEGGTIKKAI 308 (355)
Q Consensus 236 ~~pq-~~~L~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~------~l~~~~~~~l~~ai 308 (355)
-++| ..+++++++ ||+ +-.|-++=|.+.|+|+|++ ++ +.+..+..= +|-.. .+..++++++.+++
T Consensus 244 sL~el~ali~~a~l--~I~-~DSgp~HlAaa~g~P~i~l--fg--~t~p~~~~P-~~~~~~~~~~~~~~~I~~~~V~~ai 315 (319)
T TIGR02193 244 SLAEVAALLAGADA--VVG-VDTGLTHLAAALDKPTVTL--YG--ATDPGRTGG-YGKPNVALLGESGANPTPDEVLAAL 315 (319)
T ss_pred CHHHHHHHHHcCCE--EEe-CCChHHHHHHHcCCCEEEE--EC--CCCHhhccc-CCCCceEEccCccCCCCHHHHHHHH
Confidence 2333 357777877 888 4667888899999999986 22 111111111 11111 13378999999999
Q ss_pred HHHh
Q 018483 309 KRLM 312 (355)
Q Consensus 309 ~~~l 312 (355)
+++|
T Consensus 316 ~~~~ 319 (319)
T TIGR02193 316 EELL 319 (319)
T ss_pred HhhC
Confidence 8764
No 132
>PRK14099 glycogen synthase; Provisional
Probab=90.44 E-value=5.8 Score=39.04 Aligned_cols=68 Identities=12% Similarity=0.134 Sum_probs=40.7
Q ss_pred CCceee---ccC-chhHHHHhhcCCcEEeccccC--chhhhHHHHhh--hhcceeEecccCHHHHHHHHHH---HhcCc
Q 018483 248 VGGFWS---HCG-WNSTLESICEGVPMLCKPFFG--DQNLNMRYVCD--VWNVGLELEEFEGGTIKKAIKR---LMVDT 315 (355)
Q Consensus 248 ~~~~I~---HgG-~~s~~eal~~GvP~l~~P~~~--DQ~~na~~~~~--~~g~g~~l~~~~~~~l~~ai~~---~l~~~ 315 (355)
+++|+. +=| ..+.+||+++|+|.|+....+ |--.+.....+ .-+.|..++.-+.+++.++|.+ +++|+
T Consensus 370 aDifv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~~d~~~La~ai~~a~~l~~d~ 448 (485)
T PRK14099 370 ADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQFSPVTADALAAALRKTAALFADP 448 (485)
T ss_pred CCEEEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEeCCCCHHHHHHHHHHHHHHhcCH
Confidence 334764 233 357899999997777654322 32211111101 0157888887789999999987 56663
No 133
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=88.72 E-value=2.3 Score=35.92 Aligned_cols=49 Identities=20% Similarity=0.201 Sum_probs=34.1
Q ss_pred CCCceeecCCh-H--h-hhhcccCCceeeccC----chhHHHHhhcCCcEEeccccCch
Q 018483 229 ERGCIVEWAPQ-K--E-VLANDAVGGFWSHCG----WNSTLESICEGVPMLCKPFFGDQ 279 (355)
Q Consensus 229 ~~~~~~~~~pq-~--~-~L~~~~~~~~I~HgG----~~s~~eal~~GvP~l~~P~~~DQ 279 (355)
.|+.+.+++++ . . ++..+++ +|+-.. .+++.||+.+|+|+|+.+..+.+
T Consensus 161 ~~v~~~~~~~~~~~~~~~~~~~di--~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~~~ 217 (229)
T cd01635 161 DRVIFLGGLDPEELLALLLAAADV--FVLPSLREGFGLVVLEAMACGLPVIATDVGGPP 217 (229)
T ss_pred ccEEEeCCCCcHHHHHHHhhcCCE--EEecccccCcChHHHHHHhCCCCEEEcCCCCcc
Confidence 45677788633 2 2 3333555 777665 68999999999999998865443
No 134
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=88.58 E-value=3.8 Score=38.46 Aligned_cols=140 Identities=16% Similarity=0.175 Sum_probs=83.6
Q ss_pred CCCceEEEeeccccccCHHHHHHHHHHH----HhC-CCCEEEEEcCCCcCCCCcccCCChhh-hhhcC--CCCcee---e
Q 018483 167 APKSVIYVSFGSIASIDEKELLETAWGL----ANC-EQPFLWVVRPGLVRGSNCLELLPINF-QDSVG--ERGCIV---E 235 (355)
Q Consensus 167 ~~~~~v~vs~GS~~~~~~~~~~~~~~~l----~~~-~~~~i~~~~~~~~~~~~~~~~lp~~~-~~~~~--~~~~~~---~ 235 (355)
..+..+++++=-..+.. +.++.+.+++ ++. ++.|+..+..+. . + ..+ ..+.. .|+.+. +
T Consensus 202 ~~~~~iLvT~HRreN~~-~~~~~i~~al~~i~~~~~~~~viyp~H~~~--~------v-~e~~~~~L~~~~~v~li~pl~ 271 (383)
T COG0381 202 KDKKYILVTAHRRENVG-EPLEEICEALREIAEEYPDVIVIYPVHPRP--R------V-RELVLKRLKNVERVKLIDPLG 271 (383)
T ss_pred ccCcEEEEEcchhhccc-ccHHHHHHHHHHHHHhCCCceEEEeCCCCh--h------h-hHHHHHHhCCCCcEEEeCCcc
Confidence 34567888754333322 3344444443 344 455555544321 0 0 011 11222 234554 5
Q ss_pred cCChHhhhhcccCCceeeccCchhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEecccCHHHHHHHHHHHhcCc
Q 018483 236 WAPQKEVLANDAVGGFWSHCGWNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFEGGTIKKAIKRLMVDT 315 (355)
Q Consensus 236 ~~pq~~~L~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~l~~ai~~~l~~~ 315 (355)
|.+...++.++.+ ++|-+|. -.-||-..|+|.+++=..-+++. .+ + .|.-+.+ ..+.+.+.+++.+++++
T Consensus 272 ~~~f~~L~~~a~~--iltDSGg-iqEEAp~lg~Pvl~lR~~TERPE---~v-~-agt~~lv-g~~~~~i~~~~~~ll~~- 341 (383)
T COG0381 272 YLDFHNLMKNAFL--ILTDSGG-IQEEAPSLGKPVLVLRDTTERPE---GV-E-AGTNILV-GTDEENILDAATELLED- 341 (383)
T ss_pred hHHHHHHHHhceE--EEecCCc-hhhhHHhcCCcEEeeccCCCCcc---ce-e-cCceEEe-CccHHHHHHHHHHHhhC-
Confidence 6777788888877 8998774 46799999999999977777775 33 2 2333322 67779999999999998
Q ss_pred hhHHHHHHHHHHH
Q 018483 316 EGKEMRKKAIHLK 328 (355)
Q Consensus 316 ~~~~~~~~a~~l~ 328 (355)
++..++++...
T Consensus 342 --~~~~~~m~~~~ 352 (383)
T COG0381 342 --EEFYERMSNAK 352 (383)
T ss_pred --hHHHHHHhccc
Confidence 55555544433
No 135
>PLN00142 sucrose synthase
Probab=88.26 E-value=2 Score=44.65 Aligned_cols=72 Identities=13% Similarity=0.223 Sum_probs=47.5
Q ss_pred ceeec---cCc-hhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEecccCHHHHHHHHHHH----hcCch-hHHH
Q 018483 250 GFWSH---CGW-NSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFEGGTIKKAIKRL----MVDTE-GKEM 320 (355)
Q Consensus 250 ~~I~H---gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~l~~ai~~~----l~~~~-~~~~ 320 (355)
+||.= =|. .++.||+++|+|+|+.... .....+++ -..|..++.-+.+++.++|.++ +.|++ ..++
T Consensus 669 VfVlPS~~EgFGLvvLEAMA~GlPVVATdvG----G~~EIV~d-G~tG~LV~P~D~eaLA~aI~~lLekLl~Dp~lr~~m 743 (815)
T PLN00142 669 AFVQPALYEAFGLTVVEAMTCGLPTFATCQG----GPAEIIVD-GVSGFHIDPYHGDEAANKIADFFEKCKEDPSYWNKI 743 (815)
T ss_pred EEEeCCcccCCCHHHHHHHHcCCCEEEcCCC----CHHHHhcC-CCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence 36642 344 4899999999999986543 35556655 3578888866778888887654 46744 4445
Q ss_pred HHHHHH
Q 018483 321 RKKAIH 326 (355)
Q Consensus 321 ~~~a~~ 326 (355)
.+++++
T Consensus 744 g~~Ar~ 749 (815)
T PLN00142 744 SDAGLQ 749 (815)
T ss_pred HHHHHH
Confidence 555433
No 136
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=86.62 E-value=4.7 Score=41.84 Aligned_cols=64 Identities=16% Similarity=0.286 Sum_probs=45.8
Q ss_pred chhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEecccCHHHHHHHHHHHh----cCch-hHHHHHHHH
Q 018483 257 WNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFEGGTIKKAIKRLM----VDTE-GKEMRKKAI 325 (355)
Q Consensus 257 ~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~l~~ai~~~l----~~~~-~~~~~~~a~ 325 (355)
-.+++||+++|+|+|+--.. .....+++ -..|..++.-+.+++.++|.+++ .|++ ...+.++++
T Consensus 657 GLvvLEAMAcGlPVVAT~~G----G~~EiV~d-g~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~ms~~a~ 725 (784)
T TIGR02470 657 GLTVLEAMTCGLPTFATRFG----GPLEIIQD-GVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKISQGGL 725 (784)
T ss_pred CHHHHHHHHcCCCEEEcCCC----CHHHHhcC-CCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence 36999999999999986433 35566665 36798888778899999998876 4643 344444443
No 137
>COG4370 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=86.18 E-value=5.3 Score=36.26 Aligned_cols=85 Identities=16% Similarity=0.126 Sum_probs=48.4
Q ss_pred ecCChHhhhhcccCCceeeccCchhHHHHhhcCCcEEeccccCchhhh--HHHHhhhhcceeEecccCHHHHHHHHHHHh
Q 018483 235 EWAPQKEVLANDAVGGFWSHCGWNSTLESICEGVPMLCKPFFGDQNLN--MRYVCDVWNVGLELEEFEGGTIKKAIKRLM 312 (355)
Q Consensus 235 ~~~pq~~~L~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~n--a~~~~~~~g~g~~l~~~~~~~l~~ai~~~l 312 (355)
.|-...++|.++++ .|--.|. .+-.++-.|||+|.+|-.+-|+.- |.+=.+-+|..+.+-.-....-..+.++++
T Consensus 301 sqqsfadiLH~ada--algmAGT-AtEQavGLGkPvi~fPg~GPQy~pgFA~rQ~rLLG~sltlv~~~aq~a~~~~q~ll 377 (412)
T COG4370 301 SQQSFADILHAADA--ALGMAGT-ATEQAVGLGKPVIGFPGQGPQYNPGFAERQQRLLGASLTLVRPEAQAAAQAVQELL 377 (412)
T ss_pred eHHHHHHHHHHHHH--HHHhccc-hHHHhhccCCceeecCCCCCCcChHHHHHHHHHhcceeeecCCchhhHHHHHHHHh
Confidence 33333445555544 3322221 233456779999999999999764 555444456665554333444444555699
Q ss_pred cCchhHHHHHHHH
Q 018483 313 VDTEGKEMRKKAI 325 (355)
Q Consensus 313 ~~~~~~~~~~~a~ 325 (355)
.|+ .+.++++
T Consensus 378 ~dp---~r~~air 387 (412)
T COG4370 378 GDP---QRLTAIR 387 (412)
T ss_pred cCh---HHHHHHH
Confidence 994 4444444
No 138
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=85.74 E-value=2.2 Score=42.35 Aligned_cols=92 Identities=14% Similarity=0.165 Sum_probs=62.7
Q ss_pred CCCceeecCCh---HhhhhcccCCceeecc---CchhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEecccCHH
Q 018483 229 ERGCIVEWAPQ---KEVLANDAVGGFWSHC---GWNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFEGG 302 (355)
Q Consensus 229 ~~~~~~~~~pq---~~~L~~~~~~~~I~Hg---G~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~ 302 (355)
.++.+.++.+. ..++.+..+ +|.=+ |.++.+||+.+|+|+| .......++. -.-|..+ -+..
T Consensus 409 ~~v~f~gy~~e~dl~~~~~~arl--~id~s~~eg~~~~ieAiS~GiPqI-------nyg~~~~V~d-~~NG~li--~d~~ 476 (519)
T TIGR03713 409 ERIAFTTLTNEEDLISALDKLRL--IIDLSKEPDLYTQISGISAGIPQI-------NKVETDYVEH-NKNGYII--DDIS 476 (519)
T ss_pred cEEEEEecCCHHHHHHHHhhheE--EEECCCCCChHHHHHHHHcCCCee-------ecCCceeeEc-CCCcEEe--CCHH
Confidence 34556677773 335555555 77655 6779999999999999 3334455655 3566666 5678
Q ss_pred HHHHHHHHHhcCch-hHHHHHHHHHHHHHHh
Q 018483 303 TIKKAIKRLMVDTE-GKEMRKKAIHLKEKVE 332 (355)
Q Consensus 303 ~l~~ai~~~l~~~~-~~~~~~~a~~l~~~~~ 332 (355)
+|.++|..+|.+.+ ...+...|-+.++...
T Consensus 477 ~l~~al~~~L~~~~~wn~~~~~sy~~~~~yS 507 (519)
T TIGR03713 477 ELLKALDYYLDNLKNWNYSLAYSIKLIDDYS 507 (519)
T ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHHHHhh
Confidence 89999999999864 5556666666555543
No 139
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=85.70 E-value=2.7 Score=39.61 Aligned_cols=106 Identities=12% Similarity=0.104 Sum_probs=61.7
Q ss_pred ecCChHhhhhcccCCceeeccCchhHHHHhhcCCcEEeccccCchhhhHHHH----hhhhcceeEecccCHHHHHHHHHH
Q 018483 235 EWAPQKEVLANDAVGGFWSHCGWNSTLESICEGVPMLCKPFFGDQNLNMRYV----CDVWNVGLELEEFEGGTIKKAIKR 310 (355)
Q Consensus 235 ~~~pq~~~L~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~----~~~~g~g~~l~~~~~~~l~~ai~~ 310 (355)
+..+-.++|..+++ +||-- .+.+.|.++.++|+|....-.|.+...+-+ ++ ...|.. --+.++|.++|..
T Consensus 259 ~~~~~~~ll~~aDi--LITDy-SSi~fD~~~l~KPiify~~D~~~Y~~~rg~~~~~~~-~~pg~~--~~~~~eL~~~i~~ 332 (369)
T PF04464_consen 259 DNEDIYDLLAAADI--LITDY-SSIIFDFLLLNKPIIFYQPDLEEYEKERGFYFDYEE-DLPGPI--VYNFEELIEAIEN 332 (369)
T ss_dssp T-S-HHHHHHT-SE--EEESS--THHHHHGGGT--EEEE-TTTTTTTTTSSBSS-TTT-SSSS-E--ESSHHHHHHHHTT
T ss_pred CCCCHHHHHHhcCE--EEEec-hhHHHHHHHhCCCEEEEeccHHHHhhccCCCCchHh-hCCCce--eCCHHHHHHHHHh
Confidence 44567788999998 99987 458899999999999887655555332111 11 122222 2578999999999
Q ss_pred HhcCchhHHHHHHHHHHHHHHhhhhhcCCChHHHHHHHH
Q 018483 311 LMVDTEGKEMRKKAIHLKEKVELPLKEGGSCYNSLNDLV 349 (355)
Q Consensus 311 ~l~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~ 349 (355)
+++++ ..++++-++..+++-. ...|.++.+.++.++
T Consensus 333 ~~~~~--~~~~~~~~~~~~~~~~-~~Dg~s~eri~~~I~ 368 (369)
T PF04464_consen 333 IIENP--DEYKEKREKFRDKFFK-YNDGNSSERIVNYIF 368 (369)
T ss_dssp HHHHH--HHTHHHHHHHHHHHST-T--S-HHHHHHHHHH
T ss_pred hhhCC--HHHHHHHHHHHHHhCC-CCCchHHHHHHHHHh
Confidence 88763 4556666666666643 223454555554443
No 140
>COG1817 Uncharacterized protein conserved in archaea [Function unknown]
Probab=85.33 E-value=20 Score=32.77 Aligned_cols=137 Identities=12% Similarity=0.028 Sum_probs=71.0
Q ss_pred hhhHhhhccCCCceEEEeeccccc------cCHHHHHHHHHHHHhCCCCEEEEEcCCCcCCCCcccCCChhhhhhcCCCC
Q 018483 158 NCISWLNKQAPKSVIYVSFGSIAS------IDEKELLETAWGLANCEQPFLWVVRPGLVRGSNCLELLPINFQDSVGERG 231 (355)
Q Consensus 158 ~~~~~l~~~~~~~~v~vs~GS~~~------~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~ 231 (355)
+..+-|.-..+.+.|..-+=|..+ ...+....+++.|.+.+ +..+.... .+.++-+++ ..++
T Consensus 171 evlkeLgl~~~~~yIVmRpe~~~A~y~~g~~~~~~~~~li~~l~k~g---iV~ipr~~-----~~~eife~~----~n~i 238 (346)
T COG1817 171 EVLKELGLEEGETYIVMRPEPWGAHYDNGDRGISVLPDLIKELKKYG---IVLIPREK-----EQAEIFEGY----RNII 238 (346)
T ss_pred HHHHHcCCCCCCceEEEeeccccceeeccccchhhHHHHHHHHHhCc---EEEecCch-----hHHHHHhhh----cccc
Confidence 344445544445666665555333 12334677888888777 22222210 011111222 1111
Q ss_pred ceeecCChHhhhhcccCCceeeccCchhHHHHhhcCCcEEeccccCchhhhH-HHHhhhhcceeEecccCHHHHHHHHHH
Q 018483 232 CIVEWAPQKEVLANDAVGGFWSHCGWNSTLESICEGVPMLCKPFFGDQNLNM-RYVCDVWNVGLELEEFEGGTIKKAIKR 310 (355)
Q Consensus 232 ~~~~~~pq~~~L~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na-~~~~~~~g~g~~l~~~~~~~l~~ai~~ 310 (355)
.-.+-++..++|-.+++ +|+-|| .---||+..|+|.|.+= .+. ..+- +.+.+ .|......+..++-+.+.+
T Consensus 239 ~pk~~vD~l~Llyya~l--vig~gg-TMarEaAlLGtpaIs~~-pGk-ll~vdk~lie---~G~~~~s~~~~~~~~~a~~ 310 (346)
T COG1817 239 IPKKAVDTLSLLYYATL--VIGAGG-TMAREAALLGTPAISCY-PGK-LLAVDKYLIE---KGLLYHSTDEIAIVEYAVR 310 (346)
T ss_pred CCcccccHHHHHhhhhe--eecCCc-hHHHHHHHhCCceEEec-CCc-cccccHHHHh---cCceeecCCHHHHHHHHHH
Confidence 12244566778888886 776444 45579999999999863 222 3333 33333 4555554444444444445
Q ss_pred HhcC
Q 018483 311 LMVD 314 (355)
Q Consensus 311 ~l~~ 314 (355)
+|.+
T Consensus 311 ~l~~ 314 (346)
T COG1817 311 NLKY 314 (346)
T ss_pred Hhhc
Confidence 5544
No 141
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=81.48 E-value=5.8 Score=35.64 Aligned_cols=95 Identities=14% Similarity=0.097 Sum_probs=57.9
Q ss_pred CceEEEeeccccc---cCHHHHHHHHHHHHhCCCCEEEEEcCCCcCCCCcccCCChhhhhhc-CCCCc-eeec--CC-hH
Q 018483 169 KSVIYVSFGSIAS---IDEKELLETAWGLANCEQPFLWVVRPGLVRGSNCLELLPINFQDSV-GERGC-IVEW--AP-QK 240 (355)
Q Consensus 169 ~~~v~vs~GS~~~---~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~-~~~~~-~~~~--~p-q~ 240 (355)
++.|.+..||... .+.+.+.++++.|.+.++++++..+.... ..-..+.+.. ..+.. +.+- +. ..
T Consensus 121 ~~~i~i~~~~~~~~k~w~~~~~~~l~~~l~~~~~~ivl~g~~~e~-------~~~~~i~~~~~~~~~~~~~~~~~l~e~~ 193 (279)
T cd03789 121 KPVVVLPPGASGPAKRWPAERFAALADRLLARGARVVLTGGPAER-------ELAEEIAAALGGPRVVNLAGKTSLRELA 193 (279)
T ss_pred CCEEEECCCCCCccccCCHHHHHHHHHHHHHCCCEEEEEechhhH-------HHHHHHHHhcCCCccccCcCCCCHHHHH
Confidence 5677777777644 67889999999998778888766443210 0111111111 11111 1221 12 24
Q ss_pred hhhhcccCCceeeccCchhHHHHhhcCCcEEec
Q 018483 241 EVLANDAVGGFWSHCGWNSTLESICEGVPMLCK 273 (355)
Q Consensus 241 ~~L~~~~~~~~I~HgG~~s~~eal~~GvP~l~~ 273 (355)
.++.++++ +|+.-. |.++=|.+.|+|++++
T Consensus 194 ~li~~~~l--~I~~Ds-g~~HlA~a~~~p~i~l 223 (279)
T cd03789 194 ALLARADL--VVTNDS-GPMHLAAALGTPTVAL 223 (279)
T ss_pred HHHHhCCE--EEeeCC-HHHHHHHHcCCCEEEE
Confidence 57777777 999743 6777778999999986
No 142
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=80.67 E-value=7 Score=38.99 Aligned_cols=76 Identities=14% Similarity=0.170 Sum_probs=45.6
Q ss_pred hHhhhhcccCCceee-ccCc-hhHHHHhhcCCcEEeccccC-chhhhHHHHhhhhcceeEec-------ccCHHHHHHHH
Q 018483 239 QKEVLANDAVGGFWS-HCGW-NSTLESICEGVPMLCKPFFG-DQNLNMRYVCDVWNVGLELE-------EFEGGTIKKAI 308 (355)
Q Consensus 239 q~~~L~~~~~~~~I~-HgG~-~s~~eal~~GvP~l~~P~~~-DQ~~na~~~~~~~g~g~~l~-------~~~~~~l~~ai 308 (355)
..+++..+++.++=+ +=|+ -+++||+++|+|+|+....+ ..... ..+...-..|+.+. .-+.+.|.++|
T Consensus 468 y~E~~~g~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~-E~v~~~~~~gi~V~~r~~~~~~e~v~~La~~m 546 (590)
T cd03793 468 YEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFME-EHIEDPESYGIYIVDRRFKSPDESVQQLTQYM 546 (590)
T ss_pred hHHHhhhceEEEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhH-HHhccCCCceEEEecCCccchHHHHHHHHHHH
Confidence 445667777733322 3454 59999999999999987642 22221 12211102466664 23567788888
Q ss_pred HHHhcCc
Q 018483 309 KRLMVDT 315 (355)
Q Consensus 309 ~~~l~~~ 315 (355)
.++++.+
T Consensus 547 ~~~~~~~ 553 (590)
T cd03793 547 YEFCQLS 553 (590)
T ss_pred HHHhCCc
Confidence 8888553
No 143
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=80.46 E-value=4.4 Score=39.24 Aligned_cols=91 Identities=12% Similarity=0.066 Sum_probs=62.1
Q ss_pred CCCcee-ecCC-h-HhhhhcccCCceeeccCc--hhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEecccCHHH
Q 018483 229 ERGCIV-EWAP-Q-KEVLANDAVGGFWSHCGW--NSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFEGGT 303 (355)
Q Consensus 229 ~~~~~~-~~~p-q-~~~L~~~~~~~~I~HgG~--~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~ 303 (355)
+|+.+. ++.+ + ..++..+++-+-|+||.. .++.||+.+|+|++..=.... +...+.. |..+..-+.++
T Consensus 328 ~nvvly~~~~~~~l~~ly~~~dlyLdin~~e~~~~al~eA~~~G~pI~afd~t~~---~~~~i~~----g~l~~~~~~~~ 400 (438)
T TIGR02919 328 DNVKLYPNITTQKIQELYQTCDIYLDINHGNEILNAVRRAFEYNLLILGFEETAH---NRDFIAS----ENIFEHNEVDQ 400 (438)
T ss_pred CCcEEECCcChHHHHHHHHhccEEEEccccccHHHHHHHHHHcCCcEEEEecccC---CcccccC----CceecCCCHHH
Confidence 444544 6666 3 468999999888999874 899999999999998754322 2222221 44444566899
Q ss_pred HHHHHHHHhcCchhHHHHHHHHHHH
Q 018483 304 IKKAIKRLMVDTEGKEMRKKAIHLK 328 (355)
Q Consensus 304 l~~ai~~~l~~~~~~~~~~~a~~l~ 328 (355)
+.++|.++|.++ +.++++..+-+
T Consensus 401 m~~~i~~lL~d~--~~~~~~~~~q~ 423 (438)
T TIGR02919 401 LISKLKDLLNDP--NQFRELLEQQR 423 (438)
T ss_pred HHHHHHHHhcCH--HHHHHHHHHHH
Confidence 999999999984 24555444333
No 144
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=79.93 E-value=6.8 Score=38.24 Aligned_cols=103 Identities=17% Similarity=0.185 Sum_probs=61.6
Q ss_pred eecCChHh---hhhcccCCceee---ccCc-hhHHHHhhcCCc----EEeccccCchhhhHHHHhhhhcceeEecccCHH
Q 018483 234 VEWAPQKE---VLANDAVGGFWS---HCGW-NSTLESICEGVP----MLCKPFFGDQNLNMRYVCDVWNVGLELEEFEGG 302 (355)
Q Consensus 234 ~~~~pq~~---~L~~~~~~~~I~---HgG~-~s~~eal~~GvP----~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~ 302 (355)
.+++++.+ +++.+++ ||. +-|. .++.||+++|+| +|+--..+- + +. ...|+.++..+.+
T Consensus 346 ~g~v~~~el~~~y~~aDv--~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~----~---~~-~~~g~lv~p~d~~ 415 (460)
T cd03788 346 YRSLPREELAALYRAADV--ALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGA----A---EE-LSGALLVNPYDID 415 (460)
T ss_pred eCCCCHHHHHHHHHhccE--EEeCccccccCcccceeEEEecCCCceEEEeccccc----h---hh-cCCCEEECCCCHH
Confidence 36677765 4666666 652 3454 578999999999 544322211 0 11 1346666677899
Q ss_pred HHHHHHHHHhcCchhHHHHHHHHHHHHHHhhhhhcCCChHHHHHHHHHHH
Q 018483 303 TIKKAIKRLMVDTEGKEMRKKAIHLKEKVELPLKEGGSCYNSLNDLVKKI 352 (355)
Q Consensus 303 ~l~~ai~~~l~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~l 352 (355)
++.++|.+++++++ ++.+++.++..+.+. .-+...-.+++++.|
T Consensus 416 ~la~ai~~~l~~~~-~e~~~~~~~~~~~v~-----~~~~~~w~~~~l~~l 459 (460)
T cd03788 416 EVADAIHRALTMPL-EERRERHRKLREYVR-----THDVQAWANSFLDDL 459 (460)
T ss_pred HHHHHHHHHHcCCH-HHHHHHHHHHHHHHH-----hCCHHHHHHHHHHhh
Confidence 99999999998742 223333333333333 345666666666654
No 145
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=78.77 E-value=4.3 Score=33.93 Aligned_cols=69 Identities=16% Similarity=0.197 Sum_probs=40.8
Q ss_pred hcccCCceeeccCchhHHHHhhcCCcEEeccccC-----------------------chhhhHHHHhhhhcceeEec-cc
Q 018483 244 ANDAVGGFWSHCGWNSTLESICEGVPMLCKPFFG-----------------------DQNLNMRYVCDVWNVGLELE-EF 299 (355)
Q Consensus 244 ~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~-----------------------DQ~~na~~~~~~~g~g~~l~-~~ 299 (355)
.+..++++|++||...+..... ++|+|-+|..+ ....+...+.+-+|+-+... --
T Consensus 31 ~~~g~dViIsRG~ta~~lr~~~-~iPVV~I~~s~~Dil~al~~a~~~~~~Iavv~~~~~~~~~~~~~~ll~~~i~~~~~~ 109 (176)
T PF06506_consen 31 ESEGADVIISRGGTAELLRKHV-SIPVVEIPISGFDILRALAKAKKYGPKIAVVGYPNIIPGLESIEELLGVDIKIYPYD 109 (176)
T ss_dssp TTTT-SEEEEEHHHHHHHHCC--SS-EEEE---HHHHHHHHHHCCCCTSEEEEEEESS-SCCHHHHHHHHT-EEEEEEES
T ss_pred HhcCCeEEEECCHHHHHHHHhC-CCCEEEECCCHhHHHHHHHHHHhcCCcEEEEecccccHHHHHHHHHhCCceEEEEEC
Confidence 4566677999999999999888 99999999842 22233445544344444433 34
Q ss_pred CHHHHHHHHHHHhc
Q 018483 300 EGGTIKKAIKRLMV 313 (355)
Q Consensus 300 ~~~~l~~ai~~~l~ 313 (355)
+.+++...|.++..
T Consensus 110 ~~~e~~~~i~~~~~ 123 (176)
T PF06506_consen 110 SEEEIEAAIKQAKA 123 (176)
T ss_dssp SHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH
Confidence 56777777776653
No 146
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=78.72 E-value=9.4 Score=40.06 Aligned_cols=98 Identities=16% Similarity=0.125 Sum_probs=59.9
Q ss_pred hhhhcccCCceee---ccCch-hHHHHhhcCCc---EEeccccCchhhhHHHHhhhhc-ceeEecccCHHHHHHHHHHHh
Q 018483 241 EVLANDAVGGFWS---HCGWN-STLESICEGVP---MLCKPFFGDQNLNMRYVCDVWN-VGLELEEFEGGTIKKAIKRLM 312 (355)
Q Consensus 241 ~~L~~~~~~~~I~---HgG~~-s~~eal~~GvP---~l~~P~~~DQ~~na~~~~~~~g-~g~~l~~~~~~~l~~ai~~~l 312 (355)
.+++.+++ |+. +=|+| +..|++++|+| ++++.-++ ..+.. +| .|+.++..+.++++++|.++|
T Consensus 371 aly~~ADv--fvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~---G~~~~----l~~~allVnP~D~~~lA~AI~~aL 441 (797)
T PLN03063 371 ALYAITDV--MLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFA---GAGQS----LGAGALLVNPWNITEVSSAIKEAL 441 (797)
T ss_pred HHHHhCCE--EEeCccccccCcchhhHheeecCCCCCEEeeCCc---Cchhh----hcCCeEEECCCCHHHHHHHHHHHH
Confidence 45566666 664 34775 77899999999 44444221 12221 23 577878889999999999999
Q ss_pred cCchhHHHHHHHHHHHHHHhhhhhcCCChHHHHHHHHHHHH
Q 018483 313 VDTEGKEMRKKAIHLKEKVELPLKEGGSCYNSLNDLVKKIL 353 (355)
Q Consensus 313 ~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~l~ 353 (355)
+.++ ++-+++.+++.+.++ .-+...-.+.|++.+.
T Consensus 442 ~m~~-~er~~r~~~~~~~v~-----~~~~~~Wa~~fl~~l~ 476 (797)
T PLN03063 442 NMSD-EERETRHRHNFQYVK-----THSAQKWADDFMSELN 476 (797)
T ss_pred hCCH-HHHHHHHHHHHHhhh-----hCCHHHHHHHHHHHHH
Confidence 8322 334445555555554 2344455555555543
No 147
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=74.95 E-value=36 Score=30.17 Aligned_cols=80 Identities=23% Similarity=0.312 Sum_probs=49.8
Q ss_pred CCCceeecCCh---HhhhhcccCCceeec---cCc-hhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEecccCH
Q 018483 229 ERGCIVEWAPQ---KEVLANDAVGGFWSH---CGW-NSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFEG 301 (355)
Q Consensus 229 ~~~~~~~~~pq---~~~L~~~~~~~~I~H---gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~ 301 (355)
.++...+++++ ..++..+++ ++.- .|. .++.||+++|+|+|.... ......+.+ .+.|........
T Consensus 257 ~~v~~~g~~~~~~~~~~~~~~~~--~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~----~~~~e~~~~-~~~g~~~~~~~~ 329 (381)
T COG0438 257 DNVKFLGYVPDEELAELLASADV--FVLPSLSEGFGLVLLEAMAAGTPVIASDV----GGIPEVVED-GETGLLVPPGDV 329 (381)
T ss_pred CcEEEecccCHHHHHHHHHhCCE--EEeccccccchHHHHHHHhcCCcEEECCC----CChHHHhcC-CCceEecCCCCH
Confidence 44456688882 335555655 5544 344 346999999999976543 333334433 224663223368
Q ss_pred HHHHHHHHHHhcCc
Q 018483 302 GTIKKAIKRLMVDT 315 (355)
Q Consensus 302 ~~l~~ai~~~l~~~ 315 (355)
+++.+++..++++.
T Consensus 330 ~~~~~~i~~~~~~~ 343 (381)
T COG0438 330 EELADALEQLLEDP 343 (381)
T ss_pred HHHHHHHHHHhcCH
Confidence 99999999999883
No 148
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=74.48 E-value=21 Score=31.87 Aligned_cols=41 Identities=17% Similarity=0.135 Sum_probs=32.4
Q ss_pred ceeecCChHhhhhcccCCceeeccCchhHHHHhhcCCcEEeccc
Q 018483 232 CIVEWAPQKEVLANDAVGGFWSHCGWNSTLESICEGVPMLCKPF 275 (355)
Q Consensus 232 ~~~~~~pq~~~L~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~ 275 (355)
.+.+-++-.+++.+++. +||-.+ ++-+||+.+|+|++++..
T Consensus 186 ~~~~~~~~~~Ll~~s~~--VvtinS-tvGlEAll~gkpVi~~G~ 226 (269)
T PF05159_consen 186 IIDDDVNLYELLEQSDA--VVTINS-TVGLEALLHGKPVIVFGR 226 (269)
T ss_pred EECCCCCHHHHHHhCCE--EEEECC-HHHHHHHHcCCceEEecC
Confidence 34466777889999987 777654 578999999999999754
No 149
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=70.26 E-value=16 Score=38.05 Aligned_cols=109 Identities=15% Similarity=0.091 Sum_probs=61.9
Q ss_pred eeecCChHh---hhhcccCCceeec---cCc-hhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEecccCHHHHH
Q 018483 233 IVEWAPQKE---VLANDAVGGFWSH---CGW-NSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFEGGTIK 305 (355)
Q Consensus 233 ~~~~~pq~~---~L~~~~~~~~I~H---gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~l~ 305 (355)
+.+++++.+ +++.+++ |+.- -|. .++.|++++|+|-.+.|...+--.-+. + +..|+.++..+.++++
T Consensus 346 ~~~~~~~~~l~~ly~~aDv--~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~---~-l~~~llv~P~d~~~la 419 (726)
T PRK14501 346 FYRSLPFEELVALYRAADV--ALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAA---E-LAEALLVNPNDIEGIA 419 (726)
T ss_pred EeCCCCHHHHHHHHHhccE--EEecccccccCcccceEEEEcCCCCceEEEecccchhH---H-hCcCeEECCCCHHHHH
Confidence 346778765 4455555 6543 354 588999999775222222221111111 2 2336777778899999
Q ss_pred HHHHHHhcCchhHHHHHHHHHHHHHHhhhhhcCCChHHHHHHHHHHHH
Q 018483 306 KAIKRLMVDTEGKEMRKKAIHLKEKVELPLKEGGSCYNSLNDLVKKIL 353 (355)
Q Consensus 306 ~ai~~~l~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~l~ 353 (355)
++|.++++.++ ++.+++.+++.+.++ .-+...-.+.+++.++
T Consensus 420 ~ai~~~l~~~~-~e~~~r~~~~~~~v~-----~~~~~~w~~~~l~~l~ 461 (726)
T PRK14501 420 AAIKRALEMPE-EEQRERMQAMQERLR-----RYDVHKWASDFLDELR 461 (726)
T ss_pred HHHHHHHcCCH-HHHHHHHHHHHHHHH-----hCCHHHHHHHHHHHHH
Confidence 99999998642 233444444444443 2455566666665554
No 150
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=69.08 E-value=1.1e+02 Score=30.10 Aligned_cols=106 Identities=14% Similarity=0.192 Sum_probs=67.5
Q ss_pred ceeecCChHhh---hhcccCCceee---ccCchhH-HHHhhcCC----cEEeccccCchhhhHHHHhhhhcceeEecccC
Q 018483 232 CIVEWAPQKEV---LANDAVGGFWS---HCGWNST-LESICEGV----PMLCKPFFGDQNLNMRYVCDVWNVGLELEEFE 300 (355)
Q Consensus 232 ~~~~~~pq~~~---L~~~~~~~~I~---HgG~~s~-~eal~~Gv----P~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~ 300 (355)
++.+.+|+.++ +.-+++ ++. .-|+|-+ .|.++++. |+|+--+.+ |. +. +.-++.++..+
T Consensus 365 ~~~~~v~~~el~alYr~ADV--~lvT~lrDGmNLVa~Eyva~~~~~~GvLILSefaG-----aa--~~-l~~AllVNP~d 434 (487)
T TIGR02398 365 FFTRSLPYEEVSAWFAMADV--MWITPLRDGLNLVAKEYVAAQGLLDGVLVLSEFAG-----AA--VE-LKGALLTNPYD 434 (487)
T ss_pred EEcCCCCHHHHHHHHHhCCE--EEECccccccCcchhhHHhhhcCCCCCEEEecccc-----ch--hh-cCCCEEECCCC
Confidence 34467787664 445555 433 4588744 59999977 554443221 11 23 45567777889
Q ss_pred HHHHHHHHHHHhcCchhHHHHHHHHHHHHHHhhhhhcCCChHHHHHHHHHHHH
Q 018483 301 GGTIKKAIKRLMVDTEGKEMRKKAIHLKEKVELPLKEGGSCYNSLNDLVKKIL 353 (355)
Q Consensus 301 ~~~l~~ai~~~l~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~l~ 353 (355)
.++++++|.+.|+.+. ++=+++.+++.+.++. -....=.+.|++.|+
T Consensus 435 ~~~~A~ai~~AL~m~~-~Er~~R~~~l~~~v~~-----~d~~~W~~~fl~~l~ 481 (487)
T TIGR02398 435 PVRMDETIYVALAMPK-AEQQARMREMFDAVNY-----YDVQRWADEFLAAVS 481 (487)
T ss_pred HHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHhh-----CCHHHHHHHHHHHhh
Confidence 9999999999998764 3446666777776662 345555666776664
No 151
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=66.87 E-value=31 Score=31.82 Aligned_cols=96 Identities=7% Similarity=-0.052 Sum_probs=58.5
Q ss_pred CCceEEEeecccc-c---cCHHHHHHHHHHHHhCCCCEEEEEcCCCcCCCCcccCCChhhhhhcCCCCc-eee--cCCh-
Q 018483 168 PKSVIYVSFGSIA-S---IDEKELLETAWGLANCEQPFLWVVRPGLVRGSNCLELLPINFQDSVGERGC-IVE--WAPQ- 239 (355)
Q Consensus 168 ~~~~v~vs~GS~~-~---~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~-~~~--~~pq- 239 (355)
.++.|.+.-|+.. . .+.+.+.++++.+.+.+.+++..-+.... ..-..+.+..+.+.. +.+ -+.+
T Consensus 173 ~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~~~~ivl~G~~~e~-------~~~~~i~~~~~~~~~~l~g~~sL~el 245 (334)
T TIGR02195 173 ERPIIAFCPGAEFGPAKRWPHEHYAELAKRLIDQGYQVVLFGSAKDH-------PAGNEIEALLPGELRNLAGETSLDEA 245 (334)
T ss_pred CCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHHCCCEEEEEEChhhH-------HHHHHHHHhCCcccccCCCCCCHHHH
Confidence 4678888887742 2 67899999999998777777655332210 011122111112111 122 2233
Q ss_pred HhhhhcccCCceeeccCchhHHHHhhcCCcEEec
Q 018483 240 KEVLANDAVGGFWSHCGWNSTLESICEGVPMLCK 273 (355)
Q Consensus 240 ~~~L~~~~~~~~I~HgG~~s~~eal~~GvP~l~~ 273 (355)
..+++++++ ||+. -.|-++=|.+.|+|+|++
T Consensus 246 ~ali~~a~l--~I~~-DSGp~HlAaA~~~P~i~l 276 (334)
T TIGR02195 246 VDLIALAKA--VVTN-DSGLMHVAAALNRPLVAL 276 (334)
T ss_pred HHHHHhCCE--EEee-CCHHHHHHHHcCCCEEEE
Confidence 357777776 8884 567888899999999975
No 152
>COG4394 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=66.24 E-value=1e+02 Score=27.96 Aligned_cols=153 Identities=17% Similarity=0.176 Sum_probs=80.8
Q ss_pred cccCHHHHHHHHHHHHhCCCCEEEEEcCCCcCCCCcccCCChhhhh----------hcCCCCceeecCChHh---hhhcc
Q 018483 180 ASIDEKELLETAWGLANCEQPFLWVVRPGLVRGSNCLELLPINFQD----------SVGERGCIVEWAPQKE---VLAND 246 (355)
Q Consensus 180 ~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~----------~~~~~~~~~~~~pq~~---~L~~~ 246 (355)
....+..+...++.+.+.+.+++..+.++... ..+.+++.. +.+-++.+.+|+||.+ +|-.+
T Consensus 184 FaY~npa~~s~ieq~r~a~~p~llL~~e~~~~-----~~~~~~~~~~~~a~Gdv~~~~~lrvvklPFvpqddyd~LL~lc 258 (370)
T COG4394 184 FAYENPALPSWIEQLRKADKPILLLIPEGKTQ-----ANFAKYFDNNNNADGDVFQTAKLRVVKLPFVPQDDYDELLWLC 258 (370)
T ss_pred hccCCcchHHHHHHHHhcCCCEEEEcccchHH-----HHHHHHcCCCcccccchhcccceEEEEecCCcHhHHHHHHHhc
Confidence 33455566777777777777777666543211 111111111 0111233459999975 77777
Q ss_pred cCCceeeccCchhHHHHhhcCCcEEeccccCchhhhH--HHHhhh---hcceeEecccCHHHHHHHHHHHh----cCc--
Q 018483 247 AVGGFWSHCGWNSTLESICEGVPMLCKPFFGDQNLNM--RYVCDV---WNVGLELEEFEGGTIKKAIKRLM----VDT-- 315 (355)
Q Consensus 247 ~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na--~~~~~~---~g~g~~l~~~~~~~l~~ai~~~l----~~~-- 315 (355)
++. +| =|--|+..|..+|+|.+=-= .-|..|+ ..++.- +-.+ ++ .+..+++++.. .++
T Consensus 259 D~n-~V--RGEDSFVRAq~agkPflWHI--YpQdentHl~KLeaFldky~~~-----lp-~~~a~alrt~~~~~N~~~ls 327 (370)
T COG4394 259 DFN-LV--RGEDSFVRAQLAGKPFLWHI--YPQDENTHLAKLEAFLDKYCPF-----LP-PNTAKALRTFWIAWNAGRLS 327 (370)
T ss_pred ccc-ee--ecchHHHHHHHcCCCcEEEe--cCCccccHHHHHHHHHHHhCCC-----CC-HHHHHHHHHHHHHhcCCccc
Confidence 762 23 37889999999999987432 2344444 223221 1111 11 11222222221 010
Q ss_pred --------hhHHHHHHHHHHHHHHhhhhhcCCChHHHHHHHHHHH
Q 018483 316 --------EGKEMRKKAIHLKEKVELPLKEGGSCYNSLNDLVKKI 352 (355)
Q Consensus 316 --------~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~l 352 (355)
..+..|+.|++++...-. .++-.+.+-.|++..
T Consensus 328 ~~w~~f~~~~~~~r~~a~~wa~~l~~----~~dlaekLvaF~ek~ 368 (370)
T COG4394 328 DDWSYFFKNLKEWREHAKKWANHLIK----NPDLAEKLVAFIEKI 368 (370)
T ss_pred ccHHHHHHhhHHHHHHHHHHHHHHcc----CccHHHHHHHHHHHh
Confidence 014678888888887763 555666666666553
No 153
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=65.24 E-value=44 Score=30.99 Aligned_cols=98 Identities=11% Similarity=0.044 Sum_probs=60.2
Q ss_pred CCceEEEeeccccc---cCHHHHHHHHHHHHhCCCCEEEEEcCCCcCCCCcccCCChhhhhhcCC-CCc-eeec--CCh-
Q 018483 168 PKSVIYVSFGSIAS---IDEKELLETAWGLANCEQPFLWVVRPGLVRGSNCLELLPINFQDSVGE-RGC-IVEW--APQ- 239 (355)
Q Consensus 168 ~~~~v~vs~GS~~~---~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~-~~~-~~~~--~pq- 239 (355)
+++.|.+..|+... .+.+.+.++++.|.+.++++++.-+....+ ...-..+.+..+. ++. +.+- +.+
T Consensus 180 ~~~~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~~~~~ivl~g~p~~~e-----~~~~~~i~~~~~~~~~~~l~g~~sL~el 254 (344)
T TIGR02201 180 GQNYIVIQPTSRWFFKCWDNDRFSALIDALHARGYEVVLTSGPDKDE-----LAMVNEIAQGCQTPRVTSLAGKLTLPQL 254 (344)
T ss_pred CCCEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEecCCCHHH-----HHHHHHHHhhCCCCcccccCCCCCHHHH
Confidence 45677777777544 678999999999987788877664322100 0001112111111 111 2222 233
Q ss_pred HhhhhcccCCceeeccCchhHHHHhhcCCcEEec
Q 018483 240 KEVLANDAVGGFWSHCGWNSTLESICEGVPMLCK 273 (355)
Q Consensus 240 ~~~L~~~~~~~~I~HgG~~s~~eal~~GvP~l~~ 273 (355)
..+++++++ ||+. -.|-++=|.+.|+|+|++
T Consensus 255 ~ali~~a~l--~Vs~-DSGp~HlAaA~g~p~v~L 285 (344)
T TIGR02201 255 AALIDHARL--FIGV-DSVPMHMAAALGTPLVAL 285 (344)
T ss_pred HHHHHhCCE--EEec-CCHHHHHHHHcCCCEEEE
Confidence 357778877 9996 778899999999999986
No 154
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=64.69 E-value=93 Score=27.94 Aligned_cols=99 Identities=16% Similarity=0.173 Sum_probs=58.3
Q ss_pred CCCceEEEeeccccc--cCHHHHHH----HHHHHHhCCCCEEEEEcCCCcCCCCcccCCChhhhhhcC-CCCce-----e
Q 018483 167 APKSVIYVSFGSIAS--IDEKELLE----TAWGLANCEQPFLWVVRPGLVRGSNCLELLPINFQDSVG-ERGCI-----V 234 (355)
Q Consensus 167 ~~~~~v~vs~GS~~~--~~~~~~~~----~~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~-~~~~~-----~ 234 (355)
+..-|-++-.|+... ..++...+ +.+.+++.+.+|+..+...+.+. +..-+.+... .-+.+ .
T Consensus 160 ~rq~vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l~~~g~~~lisfSRRTp~~------~~s~l~~~l~s~~~i~w~~~d~ 233 (329)
T COG3660 160 PRQRVAVLVGGNNKAFVFQEDKAHQFASLLVKILENQGGSFLISFSRRTPDT------VKSILKNNLNSSPGIVWNNEDT 233 (329)
T ss_pred CCceEEEEecCCCCCCccCHHHHHHHHHHHHHHHHhCCceEEEEeecCCcHH------HHHHHHhccccCceeEeCCCCC
Confidence 344455666677655 44444433 45566678899998887653111 1011111110 11122 2
Q ss_pred ecCChHhhhhcccCCceeeccC-chhHHHHhhcCCcEEec
Q 018483 235 EWAPQKEVLANDAVGGFWSHCG-WNSTLESICEGVPMLCK 273 (355)
Q Consensus 235 ~~~pq~~~L~~~~~~~~I~HgG-~~s~~eal~~GvP~l~~ 273 (355)
++=|..+.|+.++. +|+-.. .|-..||+..|+|+-++
T Consensus 234 g~NPY~~~La~Ady--ii~TaDSinM~sEAasTgkPv~~~ 271 (329)
T COG3660 234 GYNPYIDMLAAADY--IISTADSINMCSEAASTGKPVFIL 271 (329)
T ss_pred CCCchHHHHhhcce--EEEecchhhhhHHHhccCCCeEEE
Confidence 45588899988887 666555 47889999999998774
No 155
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=63.35 E-value=28 Score=32.35 Aligned_cols=96 Identities=8% Similarity=-0.086 Sum_probs=58.5
Q ss_pred CCceEEEeecccc-c---cCHHHHHHHHHHHHhCCCCEEEEEcCCCcCCCCcccCCChhhhhhcCC----CCc-eeec--
Q 018483 168 PKSVIYVSFGSIA-S---IDEKELLETAWGLANCEQPFLWVVRPGLVRGSNCLELLPINFQDSVGE----RGC-IVEW-- 236 (355)
Q Consensus 168 ~~~~v~vs~GS~~-~---~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~----~~~-~~~~-- 236 (355)
+++.|.+..|+.. . .+.+.+.++++.|.+.+++++..-+.... ..-..+.+..+. +.. +.+-
T Consensus 179 ~~~~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~~~~~vvl~Gg~~e~-------~~~~~i~~~~~~~~~~~~~~l~g~~s 251 (348)
T PRK10916 179 ERPIIGFCPGAEFGPAKRWPHYHYAELAQQLIDEGYQVVLFGSAKDH-------EAGNEILAALNTEQQAWCRNLAGETQ 251 (348)
T ss_pred CCCEEEEeCCCCCccccCCCHHHHHHHHHHHHHCCCeEEEEeCHHhH-------HHHHHHHHhcccccccceeeccCCCC
Confidence 5678888888752 2 77899999999987667777654332210 011112111110 111 1222
Q ss_pred CCh-HhhhhcccCCceeeccCchhHHHHhhcCCcEEec
Q 018483 237 APQ-KEVLANDAVGGFWSHCGWNSTLESICEGVPMLCK 273 (355)
Q Consensus 237 ~pq-~~~L~~~~~~~~I~HgG~~s~~eal~~GvP~l~~ 273 (355)
+.+ ..+++++++ ||+ .-.|-++=|.+.|+|+|++
T Consensus 252 L~el~ali~~a~l--~I~-nDTGp~HlAaA~g~P~val 286 (348)
T PRK10916 252 LEQAVILIAACKA--IVT-NDSGLMHVAAALNRPLVAL 286 (348)
T ss_pred HHHHHHHHHhCCE--EEe-cCChHHHHHHHhCCCEEEE
Confidence 233 347778887 888 4667889999999999875
No 156
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=63.32 E-value=27 Score=32.45 Aligned_cols=95 Identities=13% Similarity=0.032 Sum_probs=58.4
Q ss_pred CceEEEeec-cccc---cCHHHHHHHHHHHHhCCCCEEEEEcCCCcCCCCcccCCChhhhhhcCCCCceeec--CCh-Hh
Q 018483 169 KSVIYVSFG-SIAS---IDEKELLETAWGLANCEQPFLWVVRPGLVRGSNCLELLPINFQDSVGERGCIVEW--APQ-KE 241 (355)
Q Consensus 169 ~~~v~vs~G-S~~~---~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~--~pq-~~ 241 (355)
++.|.++.| |.+. .+.+.+.++++.+.+.++++++..+... ...-+.+.+.......+.+- +.| ..
T Consensus 175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~g~~~e-------~e~~~~i~~~~~~~~~l~~k~sL~e~~~ 247 (334)
T COG0859 175 RPYIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLFGGPDE-------EERAEEIAKGLPNAVILAGKTSLEELAA 247 (334)
T ss_pred CCeEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEecChHH-------HHHHHHHHHhcCCccccCCCCCHHHHHH
Confidence 678999999 5533 7889999999999998866555443311 11111222122211113322 333 34
Q ss_pred hhhcccCCceeeccCchhHHHHhhcCCcEEec
Q 018483 242 VLANDAVGGFWSHCGWNSTLESICEGVPMLCK 273 (355)
Q Consensus 242 ~L~~~~~~~~I~HgG~~s~~eal~~GvP~l~~ 273 (355)
+++++++ ||+ .-.|-++=|.+.|+|+|++
T Consensus 248 li~~a~l--~I~-~DSg~~HlAaA~~~P~I~i 276 (334)
T COG0859 248 LIAGADL--VIG-NDSGPMHLAAALGTPTIAL 276 (334)
T ss_pred HHhcCCE--EEc-cCChHHHHHHHcCCCEEEE
Confidence 6667776 776 4567788899999999986
No 157
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=63.12 E-value=27 Score=32.03 Aligned_cols=132 Identities=13% Similarity=-0.003 Sum_probs=73.6
Q ss_pred CceEE-Eeeccccc--cCHHHHHHHHHHHHhCCCCEEEEEcCCCcCCCCcccCCChhhhhhcCCCCceee--cCCh-Hhh
Q 018483 169 KSVIY-VSFGSIAS--IDEKELLETAWGLANCEQPFLWVVRPGLVRGSNCLELLPINFQDSVGERGCIVE--WAPQ-KEV 242 (355)
Q Consensus 169 ~~~v~-vs~GS~~~--~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~--~~pq-~~~ 242 (355)
++.|. +..||... .+.+.+.++++.+.+.+.++++..+... + ...-+.+.+.. .+..+.+ .+.+ ..+
T Consensus 178 ~~~i~~~~~~s~~~k~Wp~e~~a~li~~l~~~~~~ivl~~G~~~-e-----~~~~~~i~~~~-~~~~l~g~~sL~elaal 250 (322)
T PRK10964 178 GPYLVFLHATTRDDKHWPEAHWRELIGLLAPSGLRIKLPWGAEH-E-----EQRAKRLAEGF-PYVEVLPKLSLEQVARV 250 (322)
T ss_pred CCeEEEEeCCCcccccCCHHHHHHHHHHHHHCCCeEEEeCCCHH-H-----HHHHHHHHccC-CcceecCCCCHHHHHHH
Confidence 44554 44444432 7889999999999877777765444321 0 00111111111 1112222 2333 357
Q ss_pred hhcccCCceeeccCchhHHHHhhcCCcEEeccccCchhh------hHHHHhhhhcceeEecccCHHHHHHHHHHHhc
Q 018483 243 LANDAVGGFWSHCGWNSTLESICEGVPMLCKPFFGDQNL------NMRYVCDVWNVGLELEEFEGGTIKKAIKRLMV 313 (355)
Q Consensus 243 L~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~------na~~~~~~~g~g~~l~~~~~~~l~~ai~~~l~ 313 (355)
++++++ ||+- -.|.++=|.+.|+|+|++=-..|... |...+.. .+-.+.+++.+++-++++++|+
T Consensus 251 i~~a~l--~I~n-DSGp~HlA~A~g~p~valfGpt~p~~~~p~~~~~~~~~~---~~~cm~~I~~e~V~~~~~~~l~ 321 (322)
T PRK10964 251 LAGAKA--VVSV-DTGLSHLTAALDRPNITLYGPTDPGLIGGYGKNQHACRS---PGKSMADLSAETVFQKLETLIS 321 (322)
T ss_pred HHhCCE--EEec-CCcHHHHHHHhCCCEEEEECCCCcccccCCCCCceeecC---CCcccccCCHHHHHHHHHHHhh
Confidence 788887 8884 56789999999999998621112111 1111110 1122337899999988888763
No 158
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=61.82 E-value=15 Score=32.16 Aligned_cols=99 Identities=8% Similarity=0.010 Sum_probs=51.7
Q ss_pred CCCceEEEeeccccc---cCHHHHHHHHHHHHhCCCCEEEEEcCCCcCCCCcccCCChhhhhhcCCCCc-eeec--CCh-
Q 018483 167 APKSVIYVSFGSIAS---IDEKELLETAWGLANCEQPFLWVVRPGLVRGSNCLELLPINFQDSVGERGC-IVEW--APQ- 239 (355)
Q Consensus 167 ~~~~~v~vs~GS~~~---~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~-~~~~--~pq- 239 (355)
.+++.|.+..|+... .+.+.+.++++.|.+.+++++...+.... . ...-+.+.+....+.. +.+- +.+
T Consensus 103 ~~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~l~e~ 177 (247)
T PF01075_consen 103 KDKPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLLGGPEEQ-E----KEIADQIAAGLQNPVINLAGKTSLREL 177 (247)
T ss_dssp TTSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--SSHHH-H----HHHHHHHHTTHTTTTEEETTTS-HHHH
T ss_pred ccCCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEccchHH-H----HHHHHHHHHhcccceEeecCCCCHHHH
Confidence 356677777777654 67889999999998887666554433210 0 0000111111111112 1121 222
Q ss_pred HhhhhcccCCceeeccCchhHHHHhhcCCcEEec
Q 018483 240 KEVLANDAVGGFWSHCGWNSTLESICEGVPMLCK 273 (355)
Q Consensus 240 ~~~L~~~~~~~~I~HgG~~s~~eal~~GvP~l~~ 273 (355)
..++.++++ +|+. -.|.++=|.+.|+|+|++
T Consensus 178 ~ali~~a~~--~I~~-Dtg~~HlA~a~~~p~v~l 208 (247)
T PF01075_consen 178 AALISRADL--VIGN-DTGPMHLAAALGTPTVAL 208 (247)
T ss_dssp HHHHHTSSE--EEEE-SSHHHHHHHHTT--EEEE
T ss_pred HHHHhcCCE--EEec-CChHHHHHHHHhCCEEEE
Confidence 357777776 8874 567889999999999998
No 159
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=59.96 E-value=5.2 Score=31.51 Aligned_cols=33 Identities=24% Similarity=0.309 Sum_probs=27.5
Q ss_pred CccEEEeCCccchHHHHHHHcCCCeEEEecchH
Q 018483 10 RISCIVYDSTMCFSQSVADHLKLPGICVRTSPA 42 (355)
Q Consensus 10 ~~D~vI~D~~~~~~~~iA~~lgiP~i~~~~~~~ 42 (355)
..|+++.+.....+..+|+++|||++.....+.
T Consensus 100 ~~~~i~~~~~~~~~~~vaE~~~iP~~~~~~~p~ 132 (139)
T PF03033_consen 100 ADDVIIAAPLAFAAALVAEQLGIPGVANRLFPW 132 (139)
T ss_dssp ECCEECHHHHHTHHHHHHHHHTS-EEEEESSGG
T ss_pred cchHHHhhhhcCccceeEhhhCchHHHHhhCCc
Confidence 578888898888999999999999999776654
No 160
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=58.64 E-value=40 Score=31.58 Aligned_cols=98 Identities=12% Similarity=0.092 Sum_probs=53.3
Q ss_pred ceEEEeeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCcCCCCcccCCCh-hhhh-hcCCCCc-----e---------
Q 018483 170 SVIYVSFGSIASIDEKELLETAWGLANCEQPFLWVVRPGLVRGSNCLELLPI-NFQD-SVGERGC-----I--------- 233 (355)
Q Consensus 170 ~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~-~~~~-~~~~~~~-----~--------- 233 (355)
.+++.+.||.+..-+ .-++++.|.+.+++++|.......+. +.+|+ ++.- ..+..++ +
T Consensus 3 ~i~~~~GGTGGHi~P--ala~a~~l~~~g~~v~~vg~~~~~e~----~l~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~ 76 (352)
T PRK12446 3 KIVFTGGGSAGHVTP--NLAIIPYLKEDNWDISYIGSHQGIEK----TIIEKENIPYYSISSGKLRRYFDLKNIKDPFLV 76 (352)
T ss_pred eEEEEcCCcHHHHHH--HHHHHHHHHhCCCEEEEEECCCcccc----ccCcccCCcEEEEeccCcCCCchHHHHHHHHHH
Confidence 477777787765222 12356677777899999976543221 11221 1100 0000000 0
Q ss_pred -eecCChHhhhhcccCCceeeccCchh---HHHHhhcCCcEEec
Q 018483 234 -VEWAPQKEVLANDAVGGFWSHCGWNS---TLESICEGVPMLCK 273 (355)
Q Consensus 234 -~~~~pq~~~L~~~~~~~~I~HgG~~s---~~eal~~GvP~l~~ 273 (355)
..+.--..++..-+-+++|+|||.-| +..|...|+|+++.
T Consensus 77 ~~~~~~~~~i~~~~kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i~ 120 (352)
T PRK12446 77 MKGVMDAYVRIRKLKPDVIFSKGGFVSVPVVIGGWLNRVPVLLH 120 (352)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCchhhHHHHHHHHHcCCCEEEE
Confidence 00111112344333344999999987 89999999999874
No 161
>PLN02470 acetolactate synthase
Probab=55.96 E-value=60 Score=32.78 Aligned_cols=29 Identities=17% Similarity=0.312 Sum_probs=24.1
Q ss_pred ccCCceeeccCc------hhHHHHhhcCCcEEecc
Q 018483 246 DAVGGFWSHCGW------NSTLESICEGVPMLCKP 274 (355)
Q Consensus 246 ~~~~~~I~HgG~------~s~~eal~~GvP~l~~P 274 (355)
..++++++|.|- +.+.+|...++|+|++.
T Consensus 75 g~~gv~~~t~GPG~~N~l~gia~A~~~~~Pvl~I~ 109 (585)
T PLN02470 75 GKVGVCIATSGPGATNLVTGLADALLDSVPLVAIT 109 (585)
T ss_pred CCCEEEEECCCccHHHHHHHHHHHHhcCCcEEEEe
Confidence 356668899885 48899999999999995
No 162
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=55.56 E-value=63 Score=30.08 Aligned_cols=98 Identities=7% Similarity=0.047 Sum_probs=59.6
Q ss_pred CCceEEEeeccccc---cCHHHHHHHHHHHHhCCCCEEEEEcCCCcCCCCcccCCChhhhhhcC-CCCc-eeec--CCh-
Q 018483 168 PKSVIYVSFGSIAS---IDEKELLETAWGLANCEQPFLWVVRPGLVRGSNCLELLPINFQDSVG-ERGC-IVEW--APQ- 239 (355)
Q Consensus 168 ~~~~v~vs~GS~~~---~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~-~~~~-~~~~--~pq- 239 (355)
+++.|.+.-|+... .+.+.+.++++.|.+.++++++..+....+. ..-..+.+... .+.. +.+- +.+
T Consensus 182 ~~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~~~~vvl~ggp~e~e~-----~~~~~i~~~~~~~~~~~l~g~~sL~el 256 (352)
T PRK10422 182 TQNYVVIQPTARQIFKCWDNDKFSAVIDALQARGYEVVLTSGPDKDDL-----ACVNEIAQGCQTPPVTALAGKTTFPEL 256 (352)
T ss_pred CCCeEEEecCCCccccCCCHHHHHHHHHHHHHCCCeEEEEcCCChHHH-----HHHHHHHHhcCCCccccccCCCCHHHH
Confidence 35678788887643 6789999999999877888776644321000 00011211111 1111 2222 233
Q ss_pred HhhhhcccCCceeeccCchhHHHHhhcCCcEEec
Q 018483 240 KEVLANDAVGGFWSHCGWNSTLESICEGVPMLCK 273 (355)
Q Consensus 240 ~~~L~~~~~~~~I~HgG~~s~~eal~~GvP~l~~ 273 (355)
..+++++++ ||+. -.|-++=|.+.|+|+|++
T Consensus 257 ~ali~~a~l--~v~n-DSGp~HlAaA~g~P~v~l 287 (352)
T PRK10422 257 GALIDHAQL--FIGV-DSAPAHIAAAVNTPLICL 287 (352)
T ss_pred HHHHHhCCE--EEec-CCHHHHHHHHcCCCEEEE
Confidence 357778887 8885 567788899999999876
No 163
>PF10093 DUF2331: Uncharacterized protein conserved in bacteria (DUF2331); InterPro: IPR016633 This entry describes a conserved hypothetical protein that typically is encoded next to the gene efp for translation elongation factor P. The function is unknown.
Probab=54.61 E-value=47 Score=31.37 Aligned_cols=91 Identities=19% Similarity=0.199 Sum_probs=57.4
Q ss_pred cccCHHHHHHHHHHHHhCCCCEEEEEcCCCcCCC--Cccc--CC-ChhhhhhcCCCCc--eeecCChHh---hhhcccCC
Q 018483 180 ASIDEKELLETAWGLANCEQPFLWVVRPGLVRGS--NCLE--LL-PINFQDSVGERGC--IVEWAPQKE---VLANDAVG 249 (355)
Q Consensus 180 ~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~--~~~~--~l-p~~~~~~~~~~~~--~~~~~pq~~---~L~~~~~~ 249 (355)
.......+..+++++.+.+.++...+..+..... ..+. .+ +.+. ...++.. +.+|+||.+ +|-.+++
T Consensus 190 F~Ye~~~l~~ll~~~~~~~~pv~llvp~g~~~~~~~~~~~~~~~~~g~~--~~~g~l~l~~lPF~~Q~~yD~LLw~cD~- 266 (374)
T PF10093_consen 190 FCYENAALASLLDAWAASPKPVHLLVPEGRALNSLAAWLGDALLQAGDS--WQRGNLTLHVLPFVPQDDYDRLLWACDF- 266 (374)
T ss_pred EeCCchHHHHHHHHHhcCCCCeEEEecCCccHHHHHHHhccccccCccc--cccCCeEEEECCCCCHHHHHHHHHhCcc-
Confidence 3456777999999999988888776655421110 0000 00 0111 1123333 459999964 8888886
Q ss_pred ceeeccCchhHHHHhhcCCcEEeccc
Q 018483 250 GFWSHCGWNSTLESICEGVPMLCKPF 275 (355)
Q Consensus 250 ~~I~HgG~~s~~eal~~GvP~l~~P~ 275 (355)
.||- |-=|+.-|..+|+|.|=-.+
T Consensus 267 NfVR--GEDSfVRAqwAgkPFvWhIY 290 (374)
T PF10093_consen 267 NFVR--GEDSFVRAQWAGKPFVWHIY 290 (374)
T ss_pred ceEe--cchHHHHHHHhCCCceEecC
Confidence 3444 78899999999999986544
No 164
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=54.25 E-value=26 Score=34.35 Aligned_cols=56 Identities=21% Similarity=0.332 Sum_probs=36.4
Q ss_pred ccCchhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEecccCHH---HHHHHHHHHhcCch
Q 018483 254 HCGWNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFEGG---TIKKAIKRLMVDTE 316 (355)
Q Consensus 254 HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~---~l~~ai~~~l~~~~ 316 (355)
|=|. ++.||+++|.|+++.= +-.=+..++. .-.|..++. +++ .+.+++.++..|++
T Consensus 377 ~FGi-v~IEAMa~glPvvAt~----~GGP~EiV~~-~~tG~l~dp-~~e~~~~~a~~~~kl~~~p~ 435 (495)
T KOG0853|consen 377 HFGI-VPIEAMACGLPVVATN----NGGPAEIVVH-GVTGLLIDP-GQEAVAELADALLKLRRDPE 435 (495)
T ss_pred Cccc-eeHHHHhcCCCEEEec----CCCceEEEEc-CCcceeeCC-chHHHHHHHHHHHHHhcCHH
Confidence 4443 7889999999999872 2222333433 344555543 444 69999999999943
No 165
>PRK04885 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=50.20 E-value=38 Score=30.39 Aligned_cols=51 Identities=16% Similarity=0.102 Sum_probs=35.5
Q ss_pred CceeeccCchhHHHHhh------cCCcEEeccccCchhhhHHHHhhhhcceeEecccCHHHHHHHHHHHhcC
Q 018483 249 GGFWSHCGWNSTLESIC------EGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFEGGTIKKAIKRLMVD 314 (355)
Q Consensus 249 ~~~I~HgG~~s~~eal~------~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~l~~ai~~~l~~ 314 (355)
+++|+-||-||++.|+. .++|++++-.. .+|.. .+++.+++.+++.+++++
T Consensus 37 Dlvi~iGGDGT~L~a~~~~~~~~~~iPilGIN~G--------------~lGFL-~~~~~~~~~~~l~~i~~g 93 (265)
T PRK04885 37 DIVISVGGDGTLLSAFHRYENQLDKVRFVGVHTG--------------HLGFY-TDWRPFEVDKLVIALAKD 93 (265)
T ss_pred CEEEEECCcHHHHHHHHHhcccCCCCeEEEEeCC--------------Cceec-ccCCHHHHHHHHHHHHcC
Confidence 45999999999999986 48899988521 11211 155667777777777765
No 166
>cd07025 Peptidase_S66 LD-Carboxypeptidase, a serine protease, includes microcin C7 self immunity protein. LD-carboxypeptidase (Muramoyltetrapeptide carboxypeptidase; EC 3.4.17.13; Merops family S66; initially described as Carboxypeptidase II) family also includes the microcin c7 self-immunity protein (MccF) as well as uncharacterized proteins including hypothetical proteins. LD-carboxypeptidase hydrolyzes the amide bond that links the dibasic amino acids to C-terminal D-amino acids. The physiological substrates of LD-carboxypeptidase are tetrapeptide fragments (such as UDP-MurNAc-tetrapeptides) that are produced when bacterial cell walls are degraded; they contain an L-configured residue (L-lysine or meso-diaminopimelic acid residue) as the penultimate residue and D-alanine as the ultimate residue. A possible role of LD-carboxypeptidase is in peptidoglycan recycling whereby the resulting tripeptide (precursor for murein synthesis) can be reconverted into peptidoglycan by attachment o
Probab=49.93 E-value=42 Score=30.34 Aligned_cols=75 Identities=16% Similarity=0.241 Sum_probs=52.1
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEEcCCCcCCCCcccCCChhhhhhcCCCCceeecCChHhhhhcccCCceeeccCchhHH
Q 018483 182 IDEKELLETAWGLANCEQPFLWVVRPGLVRGSNCLELLPINFQDSVGERGCIVEWAPQKEVLANDAVGGFWSHCGWNSTL 261 (355)
Q Consensus 182 ~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~pq~~~L~~~~~~~~I~HgG~~s~~ 261 (355)
.+.+..+++.+++...+.+.||..+++.. .. .+.++++...+-.||+. ||=..-..+++
T Consensus 46 s~~~Ra~dL~~a~~d~~i~aI~~~rGG~g-----------a~--------rlL~~ld~~~~~~~pK~--~iGySDiTaL~ 104 (282)
T cd07025 46 TDEERAADLNAAFADPEIKAIWCARGGYG-----------AN--------RLLPYLDYDLIRANPKI--FVGYSDITALH 104 (282)
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEcCCcCC-----------HH--------HhhhhCCHHHHhhCCeE--EEEecHHHHHH
Confidence 45678888999999999999999987531 11 34444555555566666 77777777777
Q ss_pred HHhhc--CCcEEeccccC
Q 018483 262 ESICE--GVPMLCKPFFG 277 (355)
Q Consensus 262 eal~~--GvP~l~~P~~~ 277 (355)
-+++. |++.+-=|+..
T Consensus 105 ~~l~~~~g~~t~hGp~~~ 122 (282)
T cd07025 105 LALYAKTGLVTFHGPMLA 122 (282)
T ss_pred HHHHHhcCceEEECcccc
Confidence 77654 77777777543
No 167
>TIGR00725 conserved hypothetical protein, DprA/Smf-related, family 1. This model represents one branch of a subfamily of uncharacterized proteins. Both PSI-BLAST and weak hits by this model show a low level of similarity and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting the branches may have distinct functions. This family is one of several families within the scope of PFAM model pfam03641, several members of which are annotated as lysine decarboxylases. That larger family, and the branch described by this model, have a well-conserved motif PGGXGTXXE.
Probab=49.80 E-value=1.1e+02 Score=25.13 Aligned_cols=96 Identities=11% Similarity=0.026 Sum_probs=49.7
Q ss_pred hhHhhhccCCCceEEEeeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCcCCCCcccCCChhhhhhcCCCCceeec-C
Q 018483 159 CISWLNKQAPKSVIYVSFGSIASIDEKELLETAWGLANCEQPFLWVVRPGLVRGSNCLELLPINFQDSVGERGCIVEW-A 237 (355)
Q Consensus 159 ~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~ 237 (355)
+-++|.+. ....++.|..+ ......++..+.+-+++=++..... .++.. .......++ .
T Consensus 23 lg~~La~~---g~~lv~Gg~~G-----lM~a~a~ga~~~gg~viGVlp~~l~--------~~~~~----~~~~i~~~~~~ 82 (159)
T TIGR00725 23 LGKELAKK---GHILINGGRTG-----VMEAVSKGAREAGGLVVGILPDEDF--------AGNPY----LTIKVKTGMNF 82 (159)
T ss_pred HHHHHHHC---CCEEEcCCchh-----HHHHHHHHHHHCCCeEEEECChhhc--------cCCCC----ceEEEECCCcc
Confidence 55667653 34566655433 4455555555556555544432210 00000 000012333 4
Q ss_pred ChHhhhh-cccCCceeeccCchhHHH---HhhcCCcEEeccc
Q 018483 238 PQKEVLA-NDAVGGFWSHCGWNSTLE---SICEGVPMLCKPF 275 (355)
Q Consensus 238 pq~~~L~-~~~~~~~I~HgG~~s~~e---al~~GvP~l~~P~ 275 (355)
+...++. .+++ .++-=||.||+.| ++.+++|+++++.
T Consensus 83 ~Rk~~m~~~sda-~IvlpGG~GTL~E~~~a~~~~kpv~~l~~ 123 (159)
T TIGR00725 83 ARNFILVRSADV-VVSVGGGYGTAIEILGAYALGGPVVVLRG 123 (159)
T ss_pred hHHHHHHHHCCE-EEEcCCchhHHHHHHHHHHcCCCEEEEEC
Confidence 4555444 4444 4555688887665 5778999999985
No 168
>PRK10353 3-methyl-adenine DNA glycosylase I; Provisional
Probab=48.38 E-value=60 Score=27.46 Aligned_cols=58 Identities=14% Similarity=0.185 Sum_probs=34.8
Q ss_pred eccccCchhhhHHHHhhhhcceeEec--------------ccCHHHHH----HHHHHHhcCchhHHHHHHHHHHHHHHh
Q 018483 272 CKPFFGDQNLNMRYVCDVWNVGLELE--------------EFEGGTIK----KAIKRLMVDTEGKEMRKKAIHLKEKVE 332 (355)
Q Consensus 272 ~~P~~~DQ~~na~~~~~~~g~g~~l~--------------~~~~~~l~----~ai~~~l~~~~~~~~~~~a~~l~~~~~ 332 (355)
+.|.+.||...-..+-+.+.+|+... .++.+.++ +-|.++|.|+ .+-+|-+++.+.+.
T Consensus 22 G~P~~dd~~LFE~L~Le~~QAGLSW~tIL~Kre~fr~aF~~Fd~~~VA~~~e~die~Ll~d~---~IIRnr~KI~Avi~ 97 (187)
T PRK10353 22 GVPETDSKKLFEMICLEGQQAGLSWITVLKKRENYRACFHQFDPVKVAAMQEEDVERLVQDA---GIIRHRGKIQAIIG 97 (187)
T ss_pred CCcCCCcHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHcCCCHHHHhCCCHHHHHHHhcCc---hhHHhHHHHHHHHH
Confidence 45668999888766544477887764 24555553 5677888884 44444444444333
No 169
>COG0801 FolK 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase [Coenzyme metabolism]
Probab=48.35 E-value=39 Score=27.78 Aligned_cols=29 Identities=21% Similarity=0.200 Sum_probs=24.7
Q ss_pred eEEEeeccccccCHHHHHHHHHHHHhCCC
Q 018483 171 VIYVSFGSIASIDEKELLETAWGLANCEQ 199 (355)
Q Consensus 171 ~v~vs~GS~~~~~~~~~~~~~~~l~~~~~ 199 (355)
.+|+++||....+.+.++..+.+|.+.+.
T Consensus 3 ~vyl~LGSNlgd~~~~l~~A~~~L~~~~~ 31 (160)
T COG0801 3 RVYLGLGSNLGDRLKQLRAALAALDALAD 31 (160)
T ss_pred EEEEEecCCCCCHHHHHHHHHHHHHhCCC
Confidence 69999999988777788999999988764
No 170
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=47.99 E-value=2.3e+02 Score=26.18 Aligned_cols=130 Identities=13% Similarity=0.128 Sum_probs=76.7
Q ss_pred eEEEeeccccccCHHHHHHHHHHHH---hCCCCEEEEEcCCCcCCCCcccCCChhhhh---hc-C-CCCce-eecCCh--
Q 018483 171 VIYVSFGSIASIDEKELLETAWGLA---NCEQPFLWVVRPGLVRGSNCLELLPINFQD---SV-G-ERGCI-VEWAPQ-- 239 (355)
Q Consensus 171 ~v~vs~GS~~~~~~~~~~~~~~~l~---~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~---~~-~-~~~~~-~~~~pq-- 239 (355)
.+-|-.|-.+..++..++ +++++. ..+.+|+.-.+-+..+. + + -+.+.+ +. + ++..+ .+++|-
T Consensus 146 ~~tIlvGNSgd~SN~Hie-~L~~l~~~~~~~v~ii~PlsYp~gn~-~-Y---i~~V~~~~~~lF~~~~~~~L~e~l~f~e 219 (322)
T PRK02797 146 KMTILVGNSGDRSNRHIE-ALRALHQQFGDNVKIIVPMGYPANNQ-A-Y---IEEVRQAGLALFGAENFQILTEKLPFDD 219 (322)
T ss_pred ceEEEEeCCCCCcccHHH-HHHHHHHHhCCCeEEEEECCcCCCCH-H-H---HHHHHHHHHHhcCcccEEehhhhCCHHH
Confidence 355556776665554433 333443 34567777666531000 0 0 011111 11 1 23343 466664
Q ss_pred -HhhhhcccCCceeec--cCchhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEec--ccCHHHHHHHHHHH
Q 018483 240 -KEVLANDAVGGFWSH--CGWNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELE--EFEGGTIKKAIKRL 311 (355)
Q Consensus 240 -~~~L~~~~~~~~I~H--gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~--~~~~~~l~~ai~~~ 311 (355)
..+|+.++++.|+++ =|.|++.-.++.|||+++- .+-+.+.... + .|+-+..+ .++...+.++=+++
T Consensus 220 Yl~lL~~~Dl~~f~~~RQQgiGnl~lLi~~G~~v~l~---r~n~fwqdl~-e-~gv~Vlf~~d~L~~~~v~e~~rql 291 (322)
T PRK02797 220 YLALLRQCDLGYFIFARQQGIGTLCLLIQLGKPVVLS---RDNPFWQDLT-E-QGLPVLFTGDDLDEDIVREAQRQL 291 (322)
T ss_pred HHHHHHhCCEEEEeechhhHHhHHHHHHHCCCcEEEe---cCCchHHHHH-h-CCCeEEecCCcccHHHHHHHHHHH
Confidence 569999999888876 5889999999999999975 3444555544 4 47777555 78888777764443
No 171
>PRK03708 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=47.68 E-value=34 Score=30.91 Aligned_cols=52 Identities=23% Similarity=0.194 Sum_probs=34.2
Q ss_pred CCceeeccCchhHHHHh---hcCCcEEeccccCchhhhHHHHhhhhcceeEecccCHHHHHHHHHHHhcC
Q 018483 248 VGGFWSHCGWNSTLESI---CEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFEGGTIKKAIKRLMVD 314 (355)
Q Consensus 248 ~~~~I~HgG~~s~~eal---~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~l~~ai~~~l~~ 314 (355)
++++|+-||-||+++++ ..++|++++|... .|. +.++..+++.+++.+++++
T Consensus 58 ~d~vi~iGGDGTlL~a~~~~~~~~pi~gIn~G~--------------lGF-l~~~~~~~~~~~l~~i~~g 112 (277)
T PRK03708 58 VDFIIAIGGDGTILRIEHKTKKDIPILGINMGT--------------LGF-LTEVEPEETFFALSRLLEG 112 (277)
T ss_pred CCEEEEEeCcHHHHHHHHhcCCCCeEEEEeCCC--------------CCc-cccCCHHHHHHHHHHHHcC
Confidence 34599999999999998 3467888887421 011 1134456666777776654
No 172
>PRK02649 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=47.66 E-value=34 Score=31.44 Aligned_cols=52 Identities=19% Similarity=0.224 Sum_probs=37.0
Q ss_pred CCceeeccCchhHHHHhhc----CCcEEeccccCchhhhHHHHhhhhcceeEecccCHHHHHHHHHHHhcC
Q 018483 248 VGGFWSHCGWNSTLESICE----GVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFEGGTIKKAIKRLMVD 314 (355)
Q Consensus 248 ~~~~I~HgG~~s~~eal~~----GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~l~~ai~~~l~~ 314 (355)
++++|+=||-||++.++.. ++|++++-.. .+|. +.+++.+++.+++.+++++
T Consensus 69 ~Dlvi~iGGDGTlL~aar~~~~~~iPilGIN~G--------------~lGF-Lt~~~~~~~~~~l~~l~~g 124 (305)
T PRK02649 69 MKFAIVLGGDGTVLSAARQLAPCGIPLLTINTG--------------HLGF-LTEAYLNQLDEAIDQVLAG 124 (305)
T ss_pred cCEEEEEeCcHHHHHHHHHhcCCCCcEEEEeCC--------------CCcc-cccCCHHHHHHHHHHHHcC
Confidence 4559999999999999774 7899888420 1111 1156677888888888765
No 173
>PLN02929 NADH kinase
Probab=47.64 E-value=34 Score=31.30 Aligned_cols=63 Identities=8% Similarity=0.031 Sum_probs=41.7
Q ss_pred CceeeccCchhHHHHhh---cCCcEEeccccC------chhhhHHHHhhhhcceeEecccCHHHHHHHHHHHhcC
Q 018483 249 GGFWSHCGWNSTLESIC---EGVPMLCKPFFG------DQNLNMRYVCDVWNVGLELEEFEGGTIKKAIKRLMVD 314 (355)
Q Consensus 249 ~~~I~HgG~~s~~eal~---~GvP~l~~P~~~------DQ~~na~~~~~~~g~g~~l~~~~~~~l~~ai~~~l~~ 314 (355)
+++|+-||-||++.|.. .++|++++=... .++.|.-.. . .-.|..- ..+.+++.+++.+++++
T Consensus 66 Dlvi~lGGDGT~L~aa~~~~~~iPvlGIN~Gp~~~~~~~~~~~~~~~-~-r~lGfL~-~~~~~~~~~~L~~il~g 137 (301)
T PLN02929 66 DLVVAVGGDGTLLQASHFLDDSIPVLGVNSDPTQKDEVEEYSDEFDA-R-RSTGHLC-AATAEDFEQVLDDVLFG 137 (301)
T ss_pred CEEEEECCcHHHHHHHHHcCCCCcEEEEECCCccccccccccccccc-c-cCccccc-cCCHHHHHHHHHHHHcC
Confidence 44999999999999854 478999886531 123333221 1 1233222 56788999999999976
No 174
>PLN02935 Bifunctional NADH kinase/NAD(+) kinase
Probab=45.54 E-value=42 Score=32.98 Aligned_cols=52 Identities=12% Similarity=0.160 Sum_probs=38.0
Q ss_pred cCCceeeccCchhHHHHhhc----CCcEEeccccCchhhhHHHHhhhhc-ceeEecccCHHHHHHHHHHHhcC
Q 018483 247 AVGGFWSHCGWNSTLESICE----GVPMLCKPFFGDQNLNMRYVCDVWN-VGLELEEFEGGTIKKAIKRLMVD 314 (355)
Q Consensus 247 ~~~~~I~HgG~~s~~eal~~----GvP~l~~P~~~DQ~~na~~~~~~~g-~g~~l~~~~~~~l~~ai~~~l~~ 314 (355)
.++++|+=||-||++.|... ++|++++- .| +|. +.+++.+++.++|.+++++
T Consensus 262 ~~DlVIsiGGDGTlL~Aar~~~~~~iPILGIN---------------~G~LGF-Lt~i~~~e~~~~Le~il~G 318 (508)
T PLN02935 262 KVDLVITLGGDGTVLWAASMFKGPVPPVVPFS---------------MGSLGF-MTPFHSEQYRDCLDAILKG 318 (508)
T ss_pred CCCEEEEECCcHHHHHHHHHhccCCCcEEEEe---------------CCCcce-ecccCHHHHHHHHHHHHcC
Confidence 34559999999999999764 57887773 22 333 2367788888888888865
No 175
>PRK02155 ppnK NAD(+)/NADH kinase family protein; Provisional
Probab=44.61 E-value=47 Score=30.25 Aligned_cols=51 Identities=12% Similarity=0.117 Sum_probs=35.4
Q ss_pred CceeeccCchhHHHHhhc----CCcEEeccccCchhhhHHHHhhhhcceeEecccCHHHHHHHHHHHhcC
Q 018483 249 GGFWSHCGWNSTLESICE----GVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFEGGTIKKAIKRLMVD 314 (355)
Q Consensus 249 ~~~I~HgG~~s~~eal~~----GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~l~~ai~~~l~~ 314 (355)
+++|+-||-||+++++.. ++|++++-.. .+|.. .+.+.+++.+++.+++++
T Consensus 65 d~vi~~GGDGt~l~~~~~~~~~~~pilGIn~G--------------~lGFL-~~~~~~~~~~~l~~~~~g 119 (291)
T PRK02155 65 DLAVVLGGDGTMLGIGRQLAPYGVPLIGINHG--------------RLGFI-TDIPLDDMQETLPPMLAG 119 (291)
T ss_pred CEEEEECCcHHHHHHHHHhcCCCCCEEEEcCC--------------Ccccc-ccCCHHHHHHHHHHHHcC
Confidence 449999999999999763 7788877420 11211 156667777788777765
No 176
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=44.44 E-value=65 Score=25.74 Aligned_cols=39 Identities=13% Similarity=0.164 Sum_probs=31.0
Q ss_pred CCceEEEeeccccccCHHHHHHHHHHHHhCCCCEEEEEcC
Q 018483 168 PKSVIYVSFGSIASIDEKELLETAWGLANCEQPFLWVVRP 207 (355)
Q Consensus 168 ~~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~ 207 (355)
...+|++++||......+.++++++.+. .+.++++....
T Consensus 50 ~~d~vvi~lGtNd~~~~~nl~~ii~~~~-~~~~ivlv~~~ 88 (150)
T cd01840 50 LRKTVVIGLGTNGPFTKDQLDELLDALG-PDRQVYLVNPH 88 (150)
T ss_pred CCCeEEEEecCCCCCCHHHHHHHHHHcC-CCCEEEEEECC
Confidence 4679999999999877888999998884 45777776543
No 177
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=44.29 E-value=1.9e+02 Score=27.13 Aligned_cols=136 Identities=12% Similarity=0.123 Sum_probs=79.8
Q ss_pred ceEEEeeccccccCHHHHHHHHHHHH---hCCCCEEEEEcCCCcCCCCcccCCChhhhhhc-C-CCCc-eeecCCh---H
Q 018483 170 SVIYVSFGSIASIDEKELLETAWGLA---NCEQPFLWVVRPGLVRGSNCLELLPINFQDSV-G-ERGC-IVEWAPQ---K 240 (355)
Q Consensus 170 ~~v~vs~GS~~~~~~~~~~~~~~~l~---~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~-~-~~~~-~~~~~pq---~ 240 (355)
..+.|-.|-.+..++..++. ++.+. ..+.+|+.-.+-+.... +..+.+-+ ..++. + ++.. +.+++|- .
T Consensus 184 ~~ltILvGNSgd~sNnHiea-L~~L~~~~~~~~kIivPLsYg~~n~-~Yi~~V~~-~~~~lF~~~~~~iL~e~mpf~eYl 260 (360)
T PF07429_consen 184 GKLTILVGNSGDPSNNHIEA-LEALKQQFGDDVKIIVPLSYGANNQ-AYIQQVIQ-AGKELFGAENFQILTEFMPFDEYL 260 (360)
T ss_pred CceEEEEcCCCCCCccHHHH-HHHHHHhcCCCeEEEEECCCCCchH-HHHHHHHH-HHHHhcCccceeEhhhhCCHHHHH
Confidence 34666667777655444333 23333 24567776665432000 00000100 00111 2 2333 3477775 4
Q ss_pred hhhhcccCCceeec--cCchhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEec--ccCHHHHHHHHHHHhc
Q 018483 241 EVLANDAVGGFWSH--CGWNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELE--EFEGGTIKKAIKRLMV 313 (355)
Q Consensus 241 ~~L~~~~~~~~I~H--gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~--~~~~~~l~~ai~~~l~ 313 (355)
.+|+.++++.|.+. =|.|++.-.++.|+|+.+- -+-+.+-... + .|+-+... +++...++++=+++..
T Consensus 261 ~lL~~cDl~if~~~RQQgiGnI~lLl~~G~~v~L~---~~np~~~~l~-~-~~ipVlf~~d~L~~~~v~ea~rql~~ 332 (360)
T PF07429_consen 261 ALLSRCDLGIFNHNRQQGIGNICLLLQLGKKVFLS---RDNPFWQDLK-E-QGIPVLFYGDELDEALVREAQRQLAN 332 (360)
T ss_pred HHHHhCCEEEEeechhhhHhHHHHHHHcCCeEEEe---cCChHHHHHH-h-CCCeEEeccccCCHHHHHHHHHHHhh
Confidence 68999999777664 5899999999999999875 3334444444 4 37766665 8999999998887763
No 178
>PRK06270 homoserine dehydrogenase; Provisional
Probab=42.16 E-value=1.5e+02 Score=27.64 Aligned_cols=59 Identities=12% Similarity=0.051 Sum_probs=35.6
Q ss_pred ChHhhhhcccCCceee------ccC---chhHHHHhhcCCcEEe---ccccCchhhhHHHHhhhhcceeEec
Q 018483 238 PQKEVLANDAVGGFWS------HCG---WNSTLESICEGVPMLC---KPFFGDQNLNMRYVCDVWNVGLELE 297 (355)
Q Consensus 238 pq~~~L~~~~~~~~I~------HgG---~~s~~eal~~GvP~l~---~P~~~DQ~~na~~~~~~~g~g~~l~ 297 (355)
+-.++|..++++++|- |+| ..-+.+|+.+|+++|+ -|+..+-..-.+...+ .|..+...
T Consensus 80 d~~ell~~~~~DvVvd~T~s~~~~~~~a~~~~~~aL~~GkhVVtaNK~pla~~~~eL~~~A~~-~g~~~~~e 150 (341)
T PRK06270 80 SGLEVIRSVDADVVVEATPTNIETGEPALSHCRKALERGKHVVTSNKGPLALAYKELKELAKK-NGVRFRYE 150 (341)
T ss_pred CHHHHhhccCCCEEEECCcCcccccchHHHHHHHHHHCCCEEEcCCcHHHHhhHHHHHHHHHH-cCCEEEEe
Confidence 4566777776666765 443 4456899999999999 4764422222222323 46655543
No 179
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=41.94 E-value=1.1e+02 Score=26.13 Aligned_cols=142 Identities=11% Similarity=0.015 Sum_probs=68.9
Q ss_pred CCCceEEEeeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCcCCCCcccCCChhhhhhcC-CCCceeecCChHhhhhc
Q 018483 167 APKSVIYVSFGSIASIDEKELLETAWGLANCEQPFLWVVRPGLVRGSNCLELLPINFQDSVG-ERGCIVEWAPQKEVLAN 245 (355)
Q Consensus 167 ~~~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~-~~~~~~~~~pq~~~L~~ 245 (355)
..+.++.|..|.++ ...++.|.+.+..+.++.+. ..+.+.+... +++.......+..-+..
T Consensus 9 ~~k~vLVIGgG~va-------~~ka~~Ll~~ga~V~VIs~~-----------~~~~l~~l~~~~~i~~~~~~~~~~~l~~ 70 (202)
T PRK06718 9 SNKRVVIVGGGKVA-------GRRAITLLKYGAHIVVISPE-----------LTENLVKLVEEGKIRWKQKEFEPSDIVD 70 (202)
T ss_pred CCCEEEEECCCHHH-------HHHHHHHHHCCCeEEEEcCC-----------CCHHHHHHHhCCCEEEEecCCChhhcCC
Confidence 34667777776655 33455666667766655322 1112111111 11222222223334555
Q ss_pred ccCCceeeccCchhHHHHhh----cCCcEEeccccCchhhhH-----HHHhhhhcceeEec-----ccCHHHHHHHHHHH
Q 018483 246 DAVGGFWSHCGWNSTLESIC----EGVPMLCKPFFGDQNLNM-----RYVCDVWNVGLELE-----EFEGGTIKKAIKRL 311 (355)
Q Consensus 246 ~~~~~~I~HgG~~s~~eal~----~GvP~l~~P~~~DQ~~na-----~~~~~~~g~g~~l~-----~~~~~~l~~ai~~~ 311 (355)
+++ +|.--+.-.+.+.++ .++++-+ .|.+..+ ..+.+ -++-+.+. ..-+..+++.|.++
T Consensus 71 adl--ViaaT~d~elN~~i~~~a~~~~lvn~----~d~~~~~~f~~Pa~~~~-g~l~iaIsT~G~sP~la~~lr~~ie~~ 143 (202)
T PRK06718 71 AFL--VIAATNDPRVNEQVKEDLPENALFNV----ITDAESGNVVFPSALHR-GKLTISVSTDGASPKLAKKIRDELEAL 143 (202)
T ss_pred ceE--EEEcCCCHHHHHHHHHHHHhCCcEEE----CCCCccCeEEEeeEEEc-CCeEEEEECCCCChHHHHHHHHHHHHH
Confidence 555 777767666555554 4554433 3443333 22332 13333443 12245566666666
Q ss_pred hcCchhHHHHHHHHHHHHHHhhh
Q 018483 312 MVDTEGKEMRKKAIHLKEKVELP 334 (355)
Q Consensus 312 l~~~~~~~~~~~a~~l~~~~~~a 334 (355)
+ .++-..+-+.+.++++.+++.
T Consensus 144 ~-~~~~~~~~~~~~~~R~~~k~~ 165 (202)
T PRK06718 144 Y-DESYESYIDFLYECRQKIKEL 165 (202)
T ss_pred c-chhHHHHHHHHHHHHHHHHHh
Confidence 5 223345666777777777653
No 180
>PRK14077 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=41.55 E-value=50 Score=30.01 Aligned_cols=52 Identities=12% Similarity=-0.010 Sum_probs=35.8
Q ss_pred CCceeeccCchhHHHHhh----cCCcEEeccccCchhhhHHHHhhhhcceeEecccCHHHHHHHHHHHhcC
Q 018483 248 VGGFWSHCGWNSTLESIC----EGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFEGGTIKKAIKRLMVD 314 (355)
Q Consensus 248 ~~~~I~HgG~~s~~eal~----~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~l~~ai~~~l~~ 314 (355)
++++|+-||-||++.++. .++|++++-.. .+|. +.+++.+++.+++.+++++
T Consensus 65 ~Dlvi~iGGDGT~L~aa~~~~~~~~PilGIN~G--------------~lGF-Lt~~~~~~~~~~l~~i~~g 120 (287)
T PRK14077 65 SDFLISLGGDGTLISLCRKAAEYDKFVLGIHAG--------------HLGF-LTDITVDEAEKFFQAFFQG 120 (287)
T ss_pred CCEEEEECCCHHHHHHHHHhcCCCCcEEEEeCC--------------Cccc-CCcCCHHHHHHHHHHHHcC
Confidence 345999999999998765 37898887421 1121 2256677788888887765
No 181
>cd03412 CbiK_N Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), N-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=40.83 E-value=52 Score=25.75 Aligned_cols=37 Identities=19% Similarity=0.292 Sum_probs=27.8
Q ss_pred ceEEEeeccccccCHHHHHHHHHHHHh--CCCCEEEEEc
Q 018483 170 SVIYVSFGSIASIDEKELLETAWGLAN--CEQPFLWVVR 206 (355)
Q Consensus 170 ~~v~vs~GS~~~~~~~~~~~~~~~l~~--~~~~~i~~~~ 206 (355)
.+++++|||......+.+..+.+.+.+ .++.|-|.+-
T Consensus 2 aillv~fGS~~~~~~~~~~~i~~~l~~~~p~~~V~~aft 40 (127)
T cd03412 2 AILLVSFGTSYPTAEKTIDAIEDKVRAAFPDYEVRWAFT 40 (127)
T ss_pred eEEEEeCCCCCHHHHHHHHHHHHHHHHHCCCCeEEEEec
Confidence 589999999987556678888888864 3456777764
No 182
>cd07039 TPP_PYR_POX Pyrimidine (PYR) binding domain of POX. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate oxidase (POX) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dimer-of-active sites. Lactobacillus plantarum POX is a homotetramer (dimer-of-homodimers), having two active sites per homodimer lying between PYR and PP domains of differ
Probab=40.04 E-value=90 Score=25.59 Aligned_cols=27 Identities=19% Similarity=0.268 Sum_probs=22.3
Q ss_pred CCceeeccCc------hhHHHHhhcCCcEEecc
Q 018483 248 VGGFWSHCGW------NSTLESICEGVPMLCKP 274 (355)
Q Consensus 248 ~~~~I~HgG~------~s~~eal~~GvP~l~~P 274 (355)
.+++++|+|- +.+.+|...++|+|++.
T Consensus 64 ~~v~~~t~GpG~~n~~~~l~~A~~~~~Pvl~I~ 96 (164)
T cd07039 64 LGVCLGSSGPGAIHLLNGLYDAKRDRAPVLAIA 96 (164)
T ss_pred CEEEEECCCCcHHHHHHHHHHHHhcCCCEEEEe
Confidence 4458888884 47889999999999996
No 183
>COG0052 RpsB Ribosomal protein S2 [Translation, ribosomal structure and biogenesis]
Probab=39.65 E-value=18 Score=31.79 Aligned_cols=33 Identities=15% Similarity=0.208 Sum_probs=25.7
Q ss_pred CccEE-EeCCcc-chHHHHHHHcCCCeEEEecchH
Q 018483 10 RISCI-VYDSTM-CFSQSVADHLKLPGICVRTSPA 42 (355)
Q Consensus 10 ~~D~v-I~D~~~-~~~~~iA~~lgiP~i~~~~~~~ 42 (355)
-||++ |.|+.. --+..=|.++|||++.+.-+-+
T Consensus 156 ~Pd~l~ViDp~~e~iAv~EA~klgIPVvAlvDTn~ 190 (252)
T COG0052 156 LPDVLFVIDPRKEKIAVKEANKLGIPVVALVDTNC 190 (252)
T ss_pred CCCEEEEeCCcHhHHHHHHHHHcCCCEEEEecCCC
Confidence 38977 778865 5677789999999999876543
No 184
>cd07062 Peptidase_S66_mccF_like Microcin C7 self-immunity protein determines resistance to exogenous microcin C7. Microcin C7 self-immunity protein (mccF): MccF, a homolog of the LD-carboxypeptidase family, mediates resistance against exogenously added microcin C7 (MccC7), a ribosomally-encoded peptide antibiotic that contains a phosphoramidate linkage to adenosine monophosphate at its C-terminus. The plasmid-encoded mccF gene is transcribed in the opposite direction to the other five genes (mccA-E) and is required for the full expression of immunity but not for production. The catalytic triad residues (Ser, His, Glu) of LD-carboxypeptidase are also conserved in MccF, strongly suggesting that MccF shares the hydrolytic activity with LD-carboxypeptidases. Substrates of MccF have not been deduced, but could likely be microcin C7 precursors. The possible role of MccF is to defend producer cells against exogenous microcin from re-entering after having been exported. It is suggested that M
Probab=38.45 E-value=75 Score=29.16 Aligned_cols=74 Identities=12% Similarity=0.038 Sum_probs=48.7
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEEcCCCcCCCCcccCCChhhhhhcCCCCceeecCChHhhhhcccCCceeeccCchhHH
Q 018483 182 IDEKELLETAWGLANCEQPFLWVVRPGLVRGSNCLELLPINFQDSVGERGCIVEWAPQKEVLANDAVGGFWSHCGWNSTL 261 (355)
Q Consensus 182 ~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~pq~~~L~~~~~~~~I~HgG~~s~~ 261 (355)
.+.+..+++.+++.....+.||.+.++.. .. ++.++++...+-.||+. ||=..-..+++
T Consensus 50 ~~~~Ra~dL~~a~~Dp~i~aI~~~rGG~g-----------~~--------rlL~~lD~~~i~~~PK~--fiGySDiTaL~ 108 (308)
T cd07062 50 SPEERAEELMAAFADPSIKAIIPTIGGDD-----------SN--------ELLPYLDYELIKKNPKI--FIGYSDITALH 108 (308)
T ss_pred CHHHHHHHHHHHhcCCCCCEEEECCcccC-----------Hh--------hhhhhcCHHHHhhCCCE--EEeccHHHHHH
Confidence 45677888999999999999999887531 11 34444555555556655 76666666666
Q ss_pred HHhh--cCCcEEecccc
Q 018483 262 ESIC--EGVPMLCKPFF 276 (355)
Q Consensus 262 eal~--~GvP~l~~P~~ 276 (355)
-+++ +|.+.+--|+.
T Consensus 109 ~al~~~~g~~t~hGp~~ 125 (308)
T cd07062 109 LAIYKKTGLVTYYGPNL 125 (308)
T ss_pred HHHHHhcCCeEEECccc
Confidence 6663 36666666654
No 185
>PRK01911 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=38.39 E-value=64 Score=29.43 Aligned_cols=52 Identities=19% Similarity=0.199 Sum_probs=37.5
Q ss_pred CCceeeccCchhHHHHhhc----CCcEEeccccCchhhhHHHHhhhhcceeEecccCHHHHHHHHHHHhcC
Q 018483 248 VGGFWSHCGWNSTLESICE----GVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFEGGTIKKAIKRLMVD 314 (355)
Q Consensus 248 ~~~~I~HgG~~s~~eal~~----GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~l~~ai~~~l~~ 314 (355)
++++|+=||-||++.++.. ++|++++-+. .+|. +.+++.+++.+++.+++++
T Consensus 65 ~dlvi~lGGDGT~L~aa~~~~~~~~PilGIN~G--------------~lGF-Lt~~~~~~~~~~l~~i~~g 120 (292)
T PRK01911 65 ADMVISIGGDGTFLRTATYVGNSNIPILGINTG--------------RLGF-LATVSKEEIEETIDELLNG 120 (292)
T ss_pred CCEEEEECCcHHHHHHHHHhcCCCCCEEEEecC--------------CCCc-ccccCHHHHHHHHHHHHcC
Confidence 3459999999999998873 7898887421 1121 1266778888888888876
No 186
>PF08030 NAD_binding_6: Ferric reductase NAD binding domain; InterPro: IPR013121 This entry contains ferric reductase NAD binding proteins.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3A1F_A.
Probab=38.31 E-value=29 Score=27.79 Aligned_cols=39 Identities=23% Similarity=0.182 Sum_probs=29.0
Q ss_pred ceEEEeeccccccCHHHHHHHHHHHH-----hCCCCEEEEEcCC
Q 018483 170 SVIYVSFGSIASIDEKELLETAWGLA-----NCEQPFLWVVRPG 208 (355)
Q Consensus 170 ~~v~vs~GS~~~~~~~~~~~~~~~l~-----~~~~~~i~~~~~~ 208 (355)
.+|+|+.|+.....-..+..++.... .....++|+++..
T Consensus 3 ~vvlvAGG~GIt~~l~~l~~l~~~~~~~~~~~~~i~lvW~vR~~ 46 (156)
T PF08030_consen 3 NVVLVAGGSGITPILPILRDLLQRQNRGSSRTRRIKLVWVVRDA 46 (156)
T ss_dssp EEEEEEEGGGHHHHHHHHHHHHHHHHTT-----EEEEEEEES-T
T ss_pred EEEEEecCcCHHHHHHHHHHHHHhhccccccccceEEEEeeCch
Confidence 58999999988866777888777776 2346799999864
No 187
>PF05014 Nuc_deoxyrib_tr: Nucleoside 2-deoxyribosyltransferase; InterPro: IPR007710 Nucleoside 2-deoxyribosyltransferase (2.4.2.6 from EC) catalyses the cleavage of the glycosidic bonds of 2-deoxyribonucleosides. Nucleoside 2-deoxyribosyltransferases can be divided into two groups based on their substrate specificity: class I enzymes are specific for the transfer of deoxyribose between two purines, while class II enzymes will transfer the deoxyribose between either purines or pyrimidines. The structure of the class I [] and class II [] enzymes are very similar. In class I enzymes, the purine base shields the active site from solvent, which the smaller pyrimidine base cannot do, while in class II enzymes the active site is shielded by a loop (residues 48-62). Both classes of enzymes are found in various Lactobacillus species and participate in nucleoside recycling in these microorganisms. This entry represents both classes of enzymes.; GO: 0050144 nucleoside deoxyribosyltransferase activity, 0070694 deoxyribonucleoside 5'-monophosphate N-glycosidase activity, 0009159 deoxyribonucleoside monophosphate catabolic process; PDB: 1S2L_A 1S2D_C 1S2I_A 1S3F_B 1S2G_C 2A0K_A 2F67_A 2F64_B 2F62_A 2F2T_A ....
Probab=37.82 E-value=33 Score=26.09 Aligned_cols=39 Identities=10% Similarity=-0.099 Sum_probs=26.7
Q ss_pred HhhhhcccCCceeecc---CchhHHHH---hhcCCcEEeccccCc
Q 018483 240 KEVLANDAVGGFWSHC---GWNSTLES---ICEGVPMLCKPFFGD 278 (355)
Q Consensus 240 ~~~L~~~~~~~~I~Hg---G~~s~~ea---l~~GvP~l~~P~~~D 278 (355)
...+..+++-+++-.+ +.||..|. .+.|+|++++-.-..
T Consensus 56 ~~~i~~~D~via~l~~~~~d~Gt~~ElG~A~algkpv~~~~~d~~ 100 (113)
T PF05014_consen 56 LEGIRECDIVIANLDGFRPDSGTAFELGYAYALGKPVILLTEDDR 100 (113)
T ss_dssp HHHHHHSSEEEEEECSSS--HHHHHHHHHHHHTTSEEEEEECCCC
T ss_pred HHHHHHCCEEEEECCCCCCCCcHHHHHHHHHHCCCEEEEEEcCCc
Confidence 3456777775555555 89999996 556999999865433
No 188
>PRK14075 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=37.19 E-value=75 Score=28.32 Aligned_cols=51 Identities=14% Similarity=0.076 Sum_probs=35.4
Q ss_pred CceeeccCchhHHHHhh-cCCcEEeccccCchhhhHHHHhhhhcceeEecccCHHHHHHHHHHHhcC
Q 018483 249 GGFWSHCGWNSTLESIC-EGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFEGGTIKKAIKRLMVD 314 (355)
Q Consensus 249 ~~~I~HgG~~s~~eal~-~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~l~~ai~~~l~~ 314 (355)
+++|+=||-||++.|+. .++|++++-.. ..|.. .+.+.+++.+++.+++++
T Consensus 43 d~vi~iGGDGT~L~a~~~~~~Pilgin~G--------------~lGfl-~~~~~~~~~~~l~~~~~g 94 (256)
T PRK14075 43 DLIIVVGGDGTVLKAAKKVGTPLVGFKAG--------------RLGFL-SSYTLEEIDRFLEDLKNW 94 (256)
T ss_pred CEEEEECCcHHHHHHHHHcCCCEEEEeCC--------------CCccc-cccCHHHHHHHHHHHHcC
Confidence 44999999999999977 57888777411 11111 156677788888887765
No 189
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=37.02 E-value=2.7e+02 Score=23.81 Aligned_cols=143 Identities=12% Similarity=0.053 Sum_probs=66.3
Q ss_pred CCceEEEeeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCcCCCCcccCCChhhhhh-cCCCCcee-ecCChHhhhhc
Q 018483 168 PKSVIYVSFGSIASIDEKELLETAWGLANCEQPFLWVVRPGLVRGSNCLELLPINFQDS-VGERGCIV-EWAPQKEVLAN 245 (355)
Q Consensus 168 ~~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~-~~~~~~~~-~~~pq~~~L~~ 245 (355)
.++++.|..|..+. .-+..|.+.+..+..+..... +.+.+- ..+++... +-.. ...+..
T Consensus 9 gk~vlVvGgG~va~-------rk~~~Ll~~ga~VtVvsp~~~-----------~~l~~l~~~~~i~~~~~~~~-~~dl~~ 69 (205)
T TIGR01470 9 GRAVLVVGGGDVAL-------RKARLLLKAGAQLRVIAEELE-----------SELTLLAEQGGITWLARCFD-ADILEG 69 (205)
T ss_pred CCeEEEECcCHHHH-------HHHHHHHHCCCEEEEEcCCCC-----------HHHHHHHHcCCEEEEeCCCC-HHHhCC
Confidence 45677776665542 334556667777665543211 111110 01122222 1122 233555
Q ss_pred ccCCceeeccCchhHHHH-----hhcCCcEEec--cccCchhhhHHHHhhhhcceeEec-----ccCHHHHHHHHHHHhc
Q 018483 246 DAVGGFWSHCGWNSTLES-----ICEGVPMLCK--PFFGDQNLNMRYVCDVWNVGLELE-----EFEGGTIKKAIKRLMV 313 (355)
Q Consensus 246 ~~~~~~I~HgG~~s~~ea-----l~~GvP~l~~--P~~~DQ~~na~~~~~~~g~g~~l~-----~~~~~~l~~ai~~~l~ 313 (355)
+.+ +|..-|...+.+. -..|+|+-++ |-.+| +..-..+.+. ++-+.+. ..-...+++.|.+++.
T Consensus 70 ~~l--Vi~at~d~~ln~~i~~~a~~~~ilvn~~d~~e~~~-f~~pa~~~~g-~l~iaisT~G~sP~la~~lr~~ie~~l~ 145 (205)
T TIGR01470 70 AFL--VIAATDDEELNRRVAHAARARGVPVNVVDDPELCS-FIFPSIVDRS-PVVVAISSGGAAPVLARLLRERIETLLP 145 (205)
T ss_pred cEE--EEECCCCHHHHHHHHHHHHHcCCEEEECCCcccCe-EEEeeEEEcC-CEEEEEECCCCCcHHHHHHHHHHHHhcc
Confidence 554 7777776544443 3467777332 22222 2222333331 3333333 2224557777777764
Q ss_pred CchhHHHHHHHHHHHHHHhhh
Q 018483 314 DTEGKEMRKKAIHLKEKVELP 334 (355)
Q Consensus 314 ~~~~~~~~~~a~~l~~~~~~a 334 (355)
... ..+-+.+.++++.+++.
T Consensus 146 ~~~-~~~~~~~~~~R~~~k~~ 165 (205)
T TIGR01470 146 PSL-GDLATLAATWRDAVKKR 165 (205)
T ss_pred hhH-HHHHHHHHHHHHHHHhh
Confidence 321 34555556666666543
No 190
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=36.81 E-value=2.8e+02 Score=24.05 Aligned_cols=37 Identities=16% Similarity=0.126 Sum_probs=30.1
Q ss_pred CCceEEEeeccccccCHHHHHHHHHHHHhCCCCEEEE
Q 018483 168 PKSVIYVSFGSIASIDEKELLETAWGLANCEQPFLWV 204 (355)
Q Consensus 168 ~~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~ 204 (355)
.+.+.||-+-|.........++..++|++.|..+.-.
T Consensus 32 ~~~i~FIPtAs~~~~~~~Yv~k~~~~l~~lg~~v~~L 68 (224)
T COG3340 32 RKTIAFIPTASVDSEDDFYVEKVRNALAKLGLEVSEL 68 (224)
T ss_pred CceEEEEecCccccchHHHHHHHHHHHHHcCCeeeee
Confidence 4689999998888766778888999999999876543
No 191
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=36.76 E-value=58 Score=32.80 Aligned_cols=93 Identities=15% Similarity=0.156 Sum_probs=50.6
Q ss_pred ChHhhhhcccCCceeeccC-c-hhHHHHhhcCCcEEeccccC-chhhhHH--HHhhhhcceeEec-ccCHHHHHHHHHHH
Q 018483 238 PQKEVLANDAVGGFWSHCG-W-NSTLESICEGVPMLCKPFFG-DQNLNMR--YVCDVWNVGLELE-EFEGGTIKKAIKRL 311 (355)
Q Consensus 238 pq~~~L~~~~~~~~I~HgG-~-~s~~eal~~GvP~l~~P~~~-DQ~~na~--~~~~~~g~g~~l~-~~~~~~l~~ai~~~ 311 (355)
+..+++.-+++++|-|-== | -|-+||+++|||.|.-=+.+ -++.+-. .-.. .|+-+.=+ .-+.++..+.|.+.
T Consensus 462 ~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsGFG~~~~~~~~~~~~-~GV~VvdR~~~n~~e~v~~la~~ 540 (633)
T PF05693_consen 462 DYYDFVRGCDLGVFPSYYEPWGYTPLECTAFGVPSITTNLSGFGCWMQEHIEDPEE-YGVYVVDRRDKNYDESVNQLADF 540 (633)
T ss_dssp -HHHHHHHSSEEEE--SSBSS-HHHHHHHHTT--EEEETTBHHHHHHHTTS-HHGG-GTEEEE-SSSS-HHHHHHHHHHH
T ss_pred CHHHHhccCceeeeccccccccCChHHHhhcCCceeeccchhHHHHHHHhhccCcC-CcEEEEeCCCCCHHHHHHHHHHH
Confidence 4556667777766655211 2 38899999999999987642 2222211 1123 46665555 66666666666655
Q ss_pred hc-----Cc-hhHHHHHHHHHHHHHH
Q 018483 312 MV-----DT-EGKEMRKKAIHLKEKV 331 (355)
Q Consensus 312 l~-----~~-~~~~~~~~a~~l~~~~ 331 (355)
|. +. +....|++++++++.+
T Consensus 541 l~~f~~~~~rqri~~Rn~ae~LS~~~ 566 (633)
T PF05693_consen 541 LYKFCQLSRRQRIIQRNRAERLSDLA 566 (633)
T ss_dssp HHHHHT--HHHHHHHHHHHHHHGGGG
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHhC
Confidence 52 22 2556777787777654
No 192
>PF06180 CbiK: Cobalt chelatase (CbiK); InterPro: IPR010388 This group, typified by Salmonella typhimurium CbiK, contains anaerobic cobalt chelatases that act in the anaerobic cobalamin biosynthesis pathway [, ]. Cobalamin (vitamin B12) can be complexed with metal via ATP-dependent reactions (aerobic pathway) (e.g., in Pseudomonas denitrificans) or via ATP-independent reactions (anaerobic pathway) (e.g., in S. typhimurium) [, ]. The corresponding cobalt chelatases are not homologous. This group belongs to the class of ATP-independent, single-subunit chelatases that also includes distantly related protoporphyrin IX (PPIX) ferrochelatase (HemH) (Class II chelatases) []. The structure of S. typhimurium CbiK shows that it has a remarkably similar topology to Bacillus subtilis ferrochelatase despite only weak sequence conservation []. Both enzymes contain a histidine residue identified as the metal ion ligand, but CbiK contains a second histidine in place of the glutamic acid residue identified as a general base in PPIX ferrochelatase []. Site-directed mutagenesis has confirmed a role for this histidine and a nearby glutamic acid in cobalt binding, modulating metal ion specificity as well as catalytic efficiency []. It should be noted that CysG and Met8p, which are multifunctional proteins associated with siroheme biosynthesis, include chelatase activity and can therefore be considered as the third class of chelatases []. As with the class II chelatases, they do not require ATP for activity. However, they are not structurally similar to HemH or CbiK, and it is likely that they have arisen by the acquisition of a chelatase function within a dehydrogenase catalytic framework [, ].; GO: 0016852 sirohydrochlorin cobaltochelatase activity; PDB: 1QGO_A 2XWP_A 2XVZ_A 2XVX_A 2XVY_A.
Probab=36.59 E-value=46 Score=29.85 Aligned_cols=39 Identities=15% Similarity=0.156 Sum_probs=23.8
Q ss_pred ceEEEeeccccccC-HHHHHHHHHHHHh--CCCCEEEEEcCC
Q 018483 170 SVIYVSFGSIASID-EKELLETAWGLAN--CEQPFLWVVRPG 208 (355)
Q Consensus 170 ~~v~vs~GS~~~~~-~~~~~~~~~~l~~--~~~~~i~~~~~~ 208 (355)
.++++||||..... ...+..+.+.+++ .++.|-|.+.+.
T Consensus 2 AIllvsFGTs~~~ar~~ti~~ie~~~~~~fp~~~V~~AfTS~ 43 (262)
T PF06180_consen 2 AILLVSFGTSYPEAREKTIDAIEKAVREAFPDYDVRRAFTSR 43 (262)
T ss_dssp EEEEEE---S-CCCCHHHHHHHHHHHHHCSTTSEEEEEES-H
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHHHHHCCCCcEEEEchHH
Confidence 47889999987743 4467777777765 478888888764
No 193
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=36.19 E-value=1.3e+02 Score=27.62 Aligned_cols=32 Identities=9% Similarity=0.247 Sum_probs=26.1
Q ss_pred hhhcccCCceeeccCchhHHHHhhcCCcEEec
Q 018483 242 VLANDAVGGFWSHCGWNSTLESICEGVPMLCK 273 (355)
Q Consensus 242 ~L~~~~~~~~I~HgG~~s~~eal~~GvP~l~~ 273 (355)
++..-+-+++|++++..+..-|-..|+|.+.+
T Consensus 88 ~l~~~~pDlVi~d~~~~~~~aA~~~~iP~i~i 119 (321)
T TIGR00661 88 IIREYNPDLIISDFEYSTVVAAKLLKIPVICI 119 (321)
T ss_pred HHHhcCCCEEEECCchHHHHHHHhcCCCEEEE
Confidence 44444445699999999999999999999966
No 194
>PRK04539 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=35.96 E-value=67 Score=29.37 Aligned_cols=52 Identities=10% Similarity=0.030 Sum_probs=36.9
Q ss_pred CCceeeccCchhHHHHhh----cCCcEEeccccCchhhhHHHHhhhhcceeEecccCHHHHHHHHHHHhcC
Q 018483 248 VGGFWSHCGWNSTLESIC----EGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFEGGTIKKAIKRLMVD 314 (355)
Q Consensus 248 ~~~~I~HgG~~s~~eal~----~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~l~~ai~~~l~~ 314 (355)
++++|+=||-||++.|.. .++|++++-.. .+|..- +++.+++.+++.+++++
T Consensus 69 ~D~vi~lGGDGT~L~aa~~~~~~~~PilGIN~G--------------~lGFL~-~~~~~~~~~~l~~i~~g 124 (296)
T PRK04539 69 CDLVAVLGGDGTFLSVAREIAPRAVPIIGINQG--------------HLGFLT-QIPREYMTDKLLPVLEG 124 (296)
T ss_pred CCEEEEECCcHHHHHHHHHhcccCCCEEEEecC--------------CCeEee-ccCHHHHHHHHHHHHcC
Confidence 345999999999999975 37899888421 122111 56778888888888865
No 195
>PF00731 AIRC: AIR carboxylase; InterPro: IPR000031 Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. PurK, N5-carboxyaminoimidazole ribonucleotide (N5_CAIR) synthetase, catalyzes the conversion of 5-aminoimidazole ribonucleotide (AIR), ATP, and bicarbonate to N5-CAIR, ADP, and Pi. PurE converts N5-CAIR to CAIR, the sixth step of de novo purine biosynthesis. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. Some members of this family contain two copies of this domain []. The crystal structure of PurE indicates a unique quaternary structure that confirms the octameric nature of the enzyme [].; GO: 0004638 phosphoribosylaminoimidazole carboxylase activity, 0006189 'de novo' IMP biosynthetic process; PDB: 3TRH_O 2YWX_A 2NSL_A 1D7A_A 2NSJ_A 1QCZ_A 2ATE_A 2NSH_A 3RG8_C 3RGG_D ....
Probab=34.81 E-value=2.5e+02 Score=22.82 Aligned_cols=135 Identities=18% Similarity=0.186 Sum_probs=66.5
Q ss_pred eEEEeeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCcCCCCcccCCChhhhhhcCCCCceeecCChHhhhhcccCCc
Q 018483 171 VIYVSFGSIASIDEKELLETAWGLANCEQPFLWVVRPGLVRGSNCLELLPINFQDSVGERGCIVEWAPQKEVLANDAVGG 250 (355)
Q Consensus 171 ~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~pq~~~L~~~~~~~ 250 (355)
.|-|-+||.. +....+++...|++.+..+-..+-+. ...|+.+. +++.. +.+..+++
T Consensus 2 ~V~Ii~gs~S--D~~~~~~a~~~L~~~gi~~~~~V~sa--------HR~p~~l~----------~~~~~---~~~~~~~v 58 (150)
T PF00731_consen 2 KVAIIMGSTS--DLPIAEEAAKTLEEFGIPYEVRVASA--------HRTPERLL----------EFVKE---YEARGADV 58 (150)
T ss_dssp EEEEEESSGG--GHHHHHHHHHHHHHTT-EEEEEE--T--------TTSHHHHH----------HHHHH---TTTTTESE
T ss_pred eEEEEeCCHH--HHHHHHHHHHHHHHcCCCEEEEEEec--------cCCHHHHH----------HHHHH---hccCCCEE
Confidence 4666677766 45677888888888886554443321 11333321 11111 12223345
Q ss_pred eeeccCch----hHHHHhhcCCcEEeccccCchhhhHH----HHhhhhcceeEecc----cCHHHHHHHHHHHhcCchhH
Q 018483 251 FWSHCGWN----STLESICEGVPMLCKPFFGDQNLNMR----YVCDVWNVGLELEE----FEGGTIKKAIKRLMVDTEGK 318 (355)
Q Consensus 251 ~I~HgG~~----s~~eal~~GvP~l~~P~~~DQ~~na~----~~~~~~g~g~~l~~----~~~~~l~~ai~~~l~~~~~~ 318 (355)
||.=.|.. ++.-++. -.|+|.+|....+..... .+.---|+++..-. .+...+...|-. +.| +
T Consensus 59 iIa~AG~~a~Lpgvva~~t-~~PVIgvP~~~~~~~g~d~l~S~vqMp~g~pvatv~i~~~~nAA~~A~~ILa-~~d---~ 133 (150)
T PF00731_consen 59 IIAVAGMSAALPGVVASLT-TLPVIGVPVSSGYLGGLDSLLSIVQMPSGVPVATVGINNGFNAALLAARILA-LKD---P 133 (150)
T ss_dssp EEEEEESS--HHHHHHHHS-SS-EEEEEE-STTTTTHHHHHHHHT--TTS--EE-SSTHHHHHHHHHHHHHH-TT----H
T ss_pred EEEECCCcccchhhheecc-CCCEEEeecCcccccCcccHHHHHhccCCCCceEEEccCchHHHHHHHHHHh-cCC---H
Confidence 88887754 3333333 799999999877543222 22211244433322 223333333322 345 6
Q ss_pred HHHHHHHHHHHHHhh
Q 018483 319 EMRKKAIHLKEKVEL 333 (355)
Q Consensus 319 ~~~~~a~~l~~~~~~ 333 (355)
+++++.+..++++++
T Consensus 134 ~l~~kl~~~~~~~~~ 148 (150)
T PF00731_consen 134 ELREKLRAYREKMKE 148 (150)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHc
Confidence 788888888877764
No 196
>PF05225 HTH_psq: helix-turn-helix, Psq domain; InterPro: IPR007889 This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster []. In pipsqueak this domain binds to GAGA sequence []. The pipsqueak family, which includes proteins from fungi, sea urchins, nematodes, insects, and vertebrates appear to be proteins essential for sequence-specific targeting of a polycomb group protein complex [].; GO: 0003677 DNA binding; PDB: 2COB_A.
Probab=34.79 E-value=62 Score=20.19 Aligned_cols=26 Identities=23% Similarity=0.270 Sum_probs=18.3
Q ss_pred CHHHHHHHHHHHhcCchhHHHHHHHHHH
Q 018483 300 EGGTIKKAIKRLMVDTEGKEMRKKAIHL 327 (355)
Q Consensus 300 ~~~~l~~ai~~~l~~~~~~~~~~~a~~l 327 (355)
+++.|.+||..+.++. .++++.|+++
T Consensus 1 tee~l~~Ai~~v~~g~--~S~r~AA~~y 26 (45)
T PF05225_consen 1 TEEDLQKAIEAVKNGK--MSIRKAAKKY 26 (45)
T ss_dssp -HHHHHHHHHHHHTTS--S-HHHHHHHH
T ss_pred CHHHHHHHHHHHHhCC--CCHHHHHHHH
Confidence 4688999999988663 5677777665
No 197
>PRK03378 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=34.03 E-value=73 Score=29.05 Aligned_cols=51 Identities=8% Similarity=0.049 Sum_probs=37.1
Q ss_pred CCceeeccCchhHHHHhh----cCCcEEeccccCchhhhHHHHhhhhcc-eeEecccCHHHHHHHHHHHhcC
Q 018483 248 VGGFWSHCGWNSTLESIC----EGVPMLCKPFFGDQNLNMRYVCDVWNV-GLELEEFEGGTIKKAIKRLMVD 314 (355)
Q Consensus 248 ~~~~I~HgG~~s~~eal~----~GvP~l~~P~~~DQ~~na~~~~~~~g~-g~~l~~~~~~~l~~ai~~~l~~ 314 (355)
++++|+=||-||++.++. +++|++.+-. |- |. +.+++.+++.+++.+++++
T Consensus 64 ~d~vi~lGGDGT~L~aa~~~~~~~~Pilgin~---------------G~lGF-l~~~~~~~~~~~l~~i~~g 119 (292)
T PRK03378 64 ADLAIVVGGDGNMLGAARVLARYDIKVIGINR---------------GNLGF-LTDLDPDNALQQLSDVLEG 119 (292)
T ss_pred CCEEEEECCcHHHHHHHHHhcCCCCeEEEEEC---------------CCCCc-ccccCHHHHHHHHHHHHcC
Confidence 345999999999999975 3788887742 21 32 1256678888899888876
No 198
>PF10820 DUF2543: Protein of unknown function (DUF2543); InterPro: IPR020251 This entry contains proteins with no known function.
Probab=34.02 E-value=1.6e+02 Score=20.36 Aligned_cols=42 Identities=24% Similarity=0.347 Sum_probs=28.2
Q ss_pred HHHHHHHHhcCchhHHHHHHHHHHHHHHhhhhhcCCChHHHHHHHHHHHHc
Q 018483 304 IKKAIKRLMVDTEGKEMRKKAIHLKEKVELPLKEGGSCYNSLNDLVKKILS 354 (355)
Q Consensus 304 l~~ai~~~l~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~l~~ 354 (355)
+.-.|.++|+| +++.+.|++ ++.+ +.|-...-+|++.++|++
T Consensus 36 FQlLitRLmnn---eeIsEeaQ~--EMA~----eAgi~~~rID~IA~fLNq 77 (81)
T PF10820_consen 36 FQLLITRLMNN---EEISEEAQQ--EMAS----EAGIDEQRIDDIANFLNQ 77 (81)
T ss_pred HHHHHHHHhcc---HhhhHHHHH--HHHH----HcCCcHHHHHHHHHHHHH
Confidence 44456788888 556655543 2333 568888899999888864
No 199
>COG3195 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=33.87 E-value=1.9e+02 Score=23.82 Aligned_cols=87 Identities=21% Similarity=0.192 Sum_probs=52.9
Q ss_pred hcccCCceeeccC---chhHHHHhhcCCcEEecccc--CchhhhHHHHhhhhcceeEec--ccCHHHHHHHHHHHhcCch
Q 018483 244 ANDAVGGFWSHCG---WNSTLESICEGVPMLCKPFF--GDQNLNMRYVCDVWNVGLELE--EFEGGTIKKAIKRLMVDTE 316 (355)
Q Consensus 244 ~~~~~~~~I~HgG---~~s~~eal~~GvP~l~~P~~--~DQ~~na~~~~~~~g~g~~l~--~~~~~~l~~ai~~~l~~~~ 316 (355)
+||++.+-+--.| ..|..|-..+|.=-+. |.- -=+..|+...++ +|.=..+- ..+.++|.++..+=|.|.+
T Consensus 71 aHPdLAgk~a~a~elta~S~~EQasAGLd~Ls-~~E~a~f~~LN~aY~~r-FgfPfI~aVkg~~k~~Il~a~~~Rl~n~~ 148 (176)
T COG3195 71 AHPDLAGKAAIAGELTAESTSEQASAGLDRLS-PEEFARFTELNAAYVER-FGFPFIIAVKGNTKDTILAAFERRLDNDR 148 (176)
T ss_pred hChhhHHHHHHHHHhhhhhHHHHHhcCcccCC-HHHHHHHHHHHHHHHHh-cCCceEEeecCCCHHHHHHHHHHHhcccH
Confidence 4676632222222 3456666666643321 100 014568999987 89876665 7889999999888888855
Q ss_pred hHHHHHHHHHHHHHHh
Q 018483 317 GKEMRKKAIHLKEKVE 332 (355)
Q Consensus 317 ~~~~~~~a~~l~~~~~ 332 (355)
..+++..+.++.+..+
T Consensus 149 e~E~~tAl~eI~rIA~ 164 (176)
T COG3195 149 EQEFATALAEIERIAL 164 (176)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 5666666666655443
No 200
>PRK03372 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=33.12 E-value=79 Score=29.04 Aligned_cols=52 Identities=21% Similarity=0.192 Sum_probs=37.4
Q ss_pred CCceeeccCchhHHHHhhc----CCcEEeccccCchhhhHHHHhhhhcceeEecccCHHHHHHHHHHHhcC
Q 018483 248 VGGFWSHCGWNSTLESICE----GVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFEGGTIKKAIKRLMVD 314 (355)
Q Consensus 248 ~~~~I~HgG~~s~~eal~~----GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~l~~ai~~~l~~ 314 (355)
++++|+=||-||++.|+.. ++|++++.+. .+|..- ++..+++.+++.+++++
T Consensus 73 ~D~vi~lGGDGT~L~aar~~~~~~~PilGIN~G--------------~lGFL~-~~~~~~~~~~l~~i~~g 128 (306)
T PRK03372 73 CELVLVLGGDGTILRAAELARAADVPVLGVNLG--------------HVGFLA-EAEAEDLDEAVERVVDR 128 (306)
T ss_pred CCEEEEEcCCHHHHHHHHHhccCCCcEEEEecC--------------CCceec-cCCHHHHHHHHHHHHcC
Confidence 4459999999999998764 8899988631 122211 56677888888888866
No 201
>PRK03501 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=32.66 E-value=95 Score=27.86 Aligned_cols=52 Identities=13% Similarity=0.096 Sum_probs=35.8
Q ss_pred CceeeccCchhHHHHhhc-----CCcEEeccccCchhhhHHHHhhhhcceeEecccCHHHHHHHHHHHhcC
Q 018483 249 GGFWSHCGWNSTLESICE-----GVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFEGGTIKKAIKRLMVD 314 (355)
Q Consensus 249 ~~~I~HgG~~s~~eal~~-----GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~l~~ai~~~l~~ 314 (355)
+++|+=||-||++.|+.. .+|++++-..+ ..|.. .+++.+++.+++.+++++
T Consensus 41 D~vi~lGGDGT~L~a~~~~~~~~~~pilgIn~~G-------------~lGFL-~~~~~~~~~~~l~~i~~g 97 (264)
T PRK03501 41 NIIVSIGGDGTFLQAVRKTGFREDCLYAGISTKD-------------QLGFY-CDFHIDDLDKMIQAITKE 97 (264)
T ss_pred cEEEEECCcHHHHHHHHHhcccCCCeEEeEecCC-------------CCeEc-ccCCHHHHHHHHHHHHcC
Confidence 449999999999999874 56777664200 11211 266778888888888865
No 202
>PRK01185 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=32.55 E-value=90 Score=28.13 Aligned_cols=52 Identities=21% Similarity=0.223 Sum_probs=36.6
Q ss_pred CCceeeccCchhHHHHhhc-CCcEEeccccCchhhhHHHHhhhhcceeEecccCHHHHHHHHHHHhcC
Q 018483 248 VGGFWSHCGWNSTLESICE-GVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFEGGTIKKAIKRLMVD 314 (355)
Q Consensus 248 ~~~~I~HgG~~s~~eal~~-GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~l~~ai~~~l~~ 314 (355)
++++|+=||-||++.++.. .+|++++-.. ..|.. .+++.+++.+++.+++++
T Consensus 53 ~D~vi~lGGDGT~L~a~~~~~~PilGIN~G--------------~lGFL-~~~~~~~~~~~l~~i~~g 105 (271)
T PRK01185 53 ADVIITIGGDGTILRTLQRAKGPILGINMG--------------GLGFL-TEIEIDEVGSAIKKLIRG 105 (271)
T ss_pred CCEEEEEcCcHHHHHHHHHcCCCEEEEECC--------------CCccC-cccCHHHHHHHHHHHHcC
Confidence 3459999999999999873 5677766320 11211 167778888899888876
No 203
>COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]
Probab=31.72 E-value=4e+02 Score=24.23 Aligned_cols=113 Identities=10% Similarity=-0.103 Sum_probs=59.2
Q ss_pred CCceecCcccccCCCcCCCCCcccchhhHhhhccCCCceEEEeeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCcCC
Q 018483 133 ASAFTIGPFHKLVPTISGSLLKEDTNCISWLNKQAPKSVIYVSFGSIASIDEKELLETAWGLANCEQPFLWVVRPGLVRG 212 (355)
Q Consensus 133 ~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~ 212 (355)
.|=+++|....+... ......++.....+..-+++-+-..........+.+..+.+++++.|..|++-++......
T Consensus 96 ~pdrf~~~~~v~p~~----~~~a~~E~er~v~~~gf~g~~l~p~~~~~~~~~~~~~pi~~~a~~~gvpv~ihtG~~~~~~ 171 (293)
T COG2159 96 YPDRFVGFARVDPRD----PEAAAEELERRVRELGFVGVKLHPVAQGFYPDDPRLYPIYEAAEELGVPVVIHTGAGPGGA 171 (293)
T ss_pred CCcceeeeeeeCCCc----hHHHHHHHHHHHHhcCceEEEecccccCCCCCChHHHHHHHHHHHcCCCEEEEeCCCCCCc
Confidence 346667766665442 1111123455554432233333232333334556678899999999999999776542110
Q ss_pred CCcccCCChhhhhhcCCCCceeecCChHhhhhcccCCceeeccC--chhHHHH
Q 018483 213 SNCLELLPINFQDSVGERGCIVEWAPQKEVLANDAVGGFWSHCG--WNSTLES 263 (355)
Q Consensus 213 ~~~~~~lp~~~~~~~~~~~~~~~~~pq~~~L~~~~~~~~I~HgG--~~s~~ea 263 (355)
.+... ....+.=..-+..+|+++.++.|+| ..=..|+
T Consensus 172 -----~~~~~---------~~~p~~~~~va~~fP~l~IVl~H~G~~~p~~~~a 210 (293)
T COG2159 172 -----GLEKG---------HSDPLYLDDVARKFPELKIVLGHMGEDYPWELEA 210 (293)
T ss_pred -----ccccC---------CCCchHHHHHHHHCCCCcEEEEecCCCCchhHHH
Confidence 00000 0111111223456889999999999 4444444
No 204
>TIGR01012 Sa_S2_E_A ribosomal protein Sa(cytosolic)/S2(archaeal). TIGR01011 describes the related protein of organelles and bacteria.
Probab=31.58 E-value=71 Score=27.24 Aligned_cols=32 Identities=13% Similarity=0.153 Sum_probs=25.3
Q ss_pred CccEE-EeCCcc-chHHHHHHHcCCCeEEEecch
Q 018483 10 RISCI-VYDSTM-CFSQSVADHLKLPGICVRTSP 41 (355)
Q Consensus 10 ~~D~v-I~D~~~-~~~~~iA~~lgiP~i~~~~~~ 41 (355)
.||+| |.|+.. .-+..=|.++|||.+++.-+.
T Consensus 108 ~Pdlliv~dp~~~~~Av~EA~~l~IP~Iai~DTn 141 (196)
T TIGR01012 108 EPEVVVVTDPRADHQALKEASEVGIPIVALCDTD 141 (196)
T ss_pred CCCEEEEECCccccHHHHHHHHcCCCEEEEeeCC
Confidence 57866 678855 567888999999999987664
No 205
>COG0299 PurN Folate-dependent phosphoribosylglycinamide formyltransferase PurN [Nucleotide transport and metabolism]
Probab=31.22 E-value=1.2e+02 Score=25.82 Aligned_cols=118 Identities=8% Similarity=-0.012 Sum_probs=72.2
Q ss_pred HHHHHHHHHHHhCCCCEEEEEcCCCcCCCCcccCCChhhhhhcCCCCceeecCChHhhhhcccCCceeeccCchhHHHHh
Q 018483 185 KELLETAWGLANCEQPFLWVVRPGLVRGSNCLELLPINFQDSVGERGCIVEWAPQKEVLANDAVGGFWSHCGWNSTLESI 264 (355)
Q Consensus 185 ~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~pq~~~L~~~~~~~~I~HgG~~s~~eal 264 (355)
++-.++++.|.+.+..++...+. ...+.+.|.++.+++++ =-||++ .=.++|..+..+|+
T Consensus 66 ~~d~~l~~~l~~~~~dlvvLAGy--------MrIL~~~fl~~~~grIl----------NIHPSL--LP~f~G~h~~~~A~ 125 (200)
T COG0299 66 AFDRALVEALDEYGPDLVVLAGY--------MRILGPEFLSRFEGRIL----------NIHPSL--LPAFPGLHAHEQAL 125 (200)
T ss_pred HHHHHHHHHHHhcCCCEEEEcch--------HHHcCHHHHHHhhcceE----------ecCccc--ccCCCCchHHHHHH
Confidence 34456888998888888877665 33455666555544322 238888 88999999999999
Q ss_pred hcCCcEEecccc--CchhhhHHHHhhhhcceeEec-ccCHHHHHHHHHHHhcCchhHHHHHHHHHHHH
Q 018483 265 CEGVPMLCKPFF--GDQNLNMRYVCDVWNVGLELE-EFEGGTIKKAIKRLMVDTEGKEMRKKAIHLKE 329 (355)
Q Consensus 265 ~~GvP~l~~P~~--~DQ~~na~~~~~~~g~g~~l~-~~~~~~l~~ai~~~l~~~~~~~~~~~a~~l~~ 329 (355)
.+|+..-++-.+ .+.-+-+-.+.+ ..+-+. .-|.|+|.+.|.+. +- .-|-+..+.+.+
T Consensus 126 ~aG~k~sG~TVH~V~e~vD~GpII~Q---~~Vpv~~~Dt~etl~~RV~~~-Eh---~lyp~~v~~~~~ 186 (200)
T COG0299 126 EAGVKVSGCTVHFVTEGVDTGPIIAQ---AAVPVLPGDTAETLEARVLEQ-EH---RLYPLAVKLLAE 186 (200)
T ss_pred HcCCCccCcEEEEEccCCCCCCeEEE---EeeeecCCCCHHHHHHHHHHH-HH---HHHHHHHHHHHh
Confidence 999998766543 222222222221 122222 45888888877653 22 345555444443
No 206
>COG1422 Predicted membrane protein [Function unknown]
Probab=31.04 E-value=1.3e+02 Score=25.66 Aligned_cols=79 Identities=16% Similarity=0.224 Sum_probs=46.6
Q ss_pred hHHHHhhcCCcEEeccccCchhh-hHHHHhhhhcceeEecccCHHHHHHHHHHHhcCch-hHHHHHHHHHHHHHHhhhhh
Q 018483 259 STLESICEGVPMLCKPFFGDQNL-NMRYVCDVWNVGLELEEFEGGTIKKAIKRLMVDTE-GKEMRKKAIHLKEKVELPLK 336 (355)
Q Consensus 259 s~~eal~~GvP~l~~P~~~DQ~~-na~~~~~~~g~g~~l~~~~~~~l~~ai~~~l~~~~-~~~~~~~a~~l~~~~~~a~~ 336 (355)
|+.++++-+.=.+..|+..=++. -.-.+.. +...-+..-+++++.|.| -+++++.++++++++++|-+
T Consensus 24 ~~~~~i~~~ln~~f~P~i~~~~p~lvilV~a----------vi~gl~~~i~~~~liD~ekm~~~qk~m~efq~e~~eA~~ 93 (201)
T COG1422 24 SIRDGIGGALNVVFGPLLSPLPPHLVILVAA----------VITGLYITILQKLLIDQEKMKELQKMMKEFQKEFREAQE 93 (201)
T ss_pred HHHHHHHHHHHHHHhhhccccccHHHHHHHH----------HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56666666666666666543322 2222221 112234456666777755 67899999999999998754
Q ss_pred cCCChHHHHHHHH
Q 018483 337 EGGSCYNSLNDLV 349 (355)
Q Consensus 337 ~~g~~~~~~~~~~ 349 (355)
+ +....++++-
T Consensus 94 ~--~d~~~lkkLq 104 (201)
T COG1422 94 S--GDMKKLKKLQ 104 (201)
T ss_pred h--CCHHHHHHHH
Confidence 3 2344454443
No 207
>PRK14092 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
Probab=30.77 E-value=1.2e+02 Score=25.02 Aligned_cols=31 Identities=19% Similarity=0.205 Sum_probs=23.5
Q ss_pred CCCceEEEeeccccccCHHHHHHHHHHHHhC
Q 018483 167 APKSVIYVSFGSIASIDEKELLETAWGLANC 197 (355)
Q Consensus 167 ~~~~~v~vs~GS~~~~~~~~~~~~~~~l~~~ 197 (355)
+.+..+|+++||....+.+.++..++.|.+.
T Consensus 5 ~~~~~v~i~LGSNlg~~~~~l~~A~~~L~~~ 35 (163)
T PRK14092 5 PASALAYVGLGANLGDAAATLRSVLAELAAA 35 (163)
T ss_pred CcCCEEEEEecCchHhHHHHHHHHHHHHHhC
Confidence 4456799999998865667777777778664
No 208
>PRK12311 rpsB 30S ribosomal protein S2/unknown domain fusion protein; Provisional
Probab=30.67 E-value=38 Score=31.34 Aligned_cols=33 Identities=15% Similarity=0.165 Sum_probs=25.9
Q ss_pred CccEE-EeCCcc-chHHHHHHHcCCCeEEEecchH
Q 018483 10 RISCI-VYDSTM-CFSQSVADHLKLPGICVRTSPA 42 (355)
Q Consensus 10 ~~D~v-I~D~~~-~~~~~iA~~lgiP~i~~~~~~~ 42 (355)
.||+| |.|+.- ..+..=|.++|||+|.+.-+.+
T Consensus 152 ~Pd~viv~d~~~e~~AI~EA~kl~IPvIaivDTn~ 186 (326)
T PRK12311 152 LPDLLFVIDTNKEDIAIQEAQRLGIPVAAIVDTNC 186 (326)
T ss_pred CCCEEEEeCCccchHHHHHHHHcCCCEEEEeeCCC
Confidence 68877 667754 6778889999999999876543
No 209
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=30.27 E-value=2.2e+02 Score=28.07 Aligned_cols=155 Identities=15% Similarity=0.093 Sum_probs=86.4
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEEcCCCcCCCCcccCCChhhhhhcCCCCceeecCCh-Hh--hhhcccCCceee-----c
Q 018483 183 DEKELLETAWGLANCEQPFLWVVRPGLVRGSNCLELLPINFQDSVGERGCIVEWAPQ-KE--VLANDAVGGFWS-----H 254 (355)
Q Consensus 183 ~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~pq-~~--~L~~~~~~~~I~-----H 254 (355)
..+.+.+.+..+.+.+.+++..-.+.. . ++.--.+..++.+++..+.-|.+. .. +.+-+++ ++- =
T Consensus 308 G~dl~~~~i~~~l~~~~~~vilG~gd~--~---le~~~~~la~~~~~~~~~~i~~~~~la~~i~agaD~--~lmPSrfEP 380 (487)
T COG0297 308 GLDLLLEAIDELLEQGWQLVLLGTGDP--E---LEEALRALASRHPGRVLVVIGYDEPLAHLIYAGADV--ILMPSRFEP 380 (487)
T ss_pred chhHHHHHHHHHHHhCceEEEEecCcH--H---HHHHHHHHHHhcCceEEEEeeecHHHHHHHHhcCCE--EEeCCcCcC
Confidence 456666666666666666554332210 0 111111222344455566655543 33 3444443 432 3
Q ss_pred cCchhHHHHhhcCCcEEeccccC--chhhhHHH--HhhhhcceeEecccCHHHHHHHHHHHhcCchhHHHHHHHHHHHHH
Q 018483 255 CGWNSTLESICEGVPMLCKPFFG--DQNLNMRY--VCDVWNVGLELEEFEGGTIKKAIKRLMVDTEGKEMRKKAIHLKEK 330 (355)
Q Consensus 255 gG~~s~~eal~~GvP~l~~P~~~--DQ~~na~~--~~~~~g~g~~l~~~~~~~l~~ai~~~l~~~~~~~~~~~a~~l~~~ 330 (355)
||. |=++|+.+|.+-|+.|..+ |--..... ... -|.|..+...+++.+..++++.+. -|+.+...++..
T Consensus 381 cGL-~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~-~gtGf~f~~~~~~~l~~al~rA~~-----~y~~~~~~w~~~ 453 (487)
T COG0297 381 CGL-TQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQG-VGTGFLFLQTNPDHLANALRRALV-----LYRAPPLLWRKV 453 (487)
T ss_pred CcH-HHHHHHHcCCcceEcccCCccceecCccchhccC-ceeEEEEecCCHHHHHHHHHHHHH-----HhhCCHHHHHHH
Confidence 565 5678999999888888753 32221111 344 488988885599999999998773 455555546666
Q ss_pred HhhhhhcCCChHHHHHHHHHH
Q 018483 331 VELPLKEGGSCYNSLNDLVKK 351 (355)
Q Consensus 331 ~~~a~~~~g~~~~~~~~~~~~ 351 (355)
.+.++...-|-.....+.++.
T Consensus 454 ~~~~m~~d~sw~~sa~~y~~l 474 (487)
T COG0297 454 QPNAMGADFSWDLSAKEYVEL 474 (487)
T ss_pred HHhhcccccCchhHHHHHHHH
Confidence 666655444444455555443
No 210
>PRK04020 rps2P 30S ribosomal protein S2; Provisional
Probab=30.23 E-value=75 Score=27.30 Aligned_cols=33 Identities=12% Similarity=0.108 Sum_probs=25.5
Q ss_pred CccEE-EeCCcc-chHHHHHHHcCCCeEEEecchH
Q 018483 10 RISCI-VYDSTM-CFSQSVADHLKLPGICVRTSPA 42 (355)
Q Consensus 10 ~~D~v-I~D~~~-~~~~~iA~~lgiP~i~~~~~~~ 42 (355)
.||+| |+|+.. .-+..=|.++|||.+++.-+.+
T Consensus 114 ~Pdliiv~dp~~~~~AI~EA~kl~IP~IaivDTn~ 148 (204)
T PRK04020 114 EPDVVVVTDPRGDAQAVKEAIEVGIPVVALCDTDN 148 (204)
T ss_pred CCCEEEEECCcccHHHHHHHHHhCCCEEEEEeCCC
Confidence 57866 778855 5677789999999999876643
No 211
>cd01425 RPS2 Ribosomal protein S2 (RPS2), involved in formation of the translation initiation complex, where it might contact the messenger RNA and several components of the ribosome. It has been shown that in Escherichia coli RPS2 is essential for the binding of ribosomal protein S1 to the 30s ribosomal subunit. In humans, most likely in all vertebrates, and perhaps in all metazoans, the protein also functions as the 67 kDa laminin receptor (LAMR1 or 67LR), which is formed from a 37 kDa precursor, and is overexpressed in many tumors. 67LR is a cell surface receptor which interacts with a variety of ligands, laminin-1 and others. It is assumed that the ligand interactions are mediated via the conserved C-terminus, which becomes extracellular as the protein undergoes conformational changes which are not well understood. Specifically, a conserved palindromic motif, LMWWML, may participate in the interactions. 67LR plays essential roles in the adhesion of cells to the basement membrane an
Probab=30.12 E-value=44 Score=28.37 Aligned_cols=33 Identities=18% Similarity=0.172 Sum_probs=25.7
Q ss_pred CCccEE-EeCCcc-chHHHHHHHcCCCeEEEecch
Q 018483 9 DRISCI-VYDSTM-CFSQSVADHLKLPGICVRTSP 41 (355)
Q Consensus 9 ~~~D~v-I~D~~~-~~~~~iA~~lgiP~i~~~~~~ 41 (355)
..||+| |.|+.. ..+..=|.++|||.+++.-+.
T Consensus 126 ~~Pdlviv~~~~~~~~ai~Ea~~l~IP~I~i~Dtn 160 (193)
T cd01425 126 RLPDLVIVLDPRKEHQAIREASKLGIPVIAIVDTN 160 (193)
T ss_pred cCCCEEEEeCCccchHHHHHHHHcCCCEEEEecCC
Confidence 479977 667644 567778999999999987665
No 212
>PRK11914 diacylglycerol kinase; Reviewed
Probab=29.74 E-value=1.6e+02 Score=26.88 Aligned_cols=27 Identities=11% Similarity=0.090 Sum_probs=22.9
Q ss_pred CceeeccCchhHHHHh----hcCCcEEeccc
Q 018483 249 GGFWSHCGWNSTLESI----CEGVPMLCKPF 275 (355)
Q Consensus 249 ~~~I~HgG~~s~~eal----~~GvP~l~~P~ 275 (355)
+.+|.-||-||+.|++ ..++|+-++|.
T Consensus 66 d~vvv~GGDGTi~evv~~l~~~~~~lgiiP~ 96 (306)
T PRK11914 66 DALVVVGGDGVISNALQVLAGTDIPLGIIPA 96 (306)
T ss_pred CEEEEECCchHHHHHhHHhccCCCcEEEEeC
Confidence 4499999999999987 34799999997
No 213
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=29.71 E-value=1.5e+02 Score=24.61 Aligned_cols=99 Identities=18% Similarity=0.198 Sum_probs=58.7
Q ss_pred CCceEEEeeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCcCCCCcccCCChhhhhhcCCCCceeecCChHhhhhccc
Q 018483 168 PKSVIYVSFGSIASIDEKELLETAWGLANCEQPFLWVVRPGLVRGSNCLELLPINFQDSVGERGCIVEWAPQKEVLANDA 247 (355)
Q Consensus 168 ~~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~pq~~~L~~~~ 247 (355)
.+.+-.+.+|.++ +++++-+...+.+|+..-+... .. .... . ....+.+-.++++.++
T Consensus 36 g~tvgIiG~G~IG-------~~vA~~l~~fG~~V~~~d~~~~--------~~-~~~~----~--~~~~~~~l~ell~~aD 93 (178)
T PF02826_consen 36 GKTVGIIGYGRIG-------RAVARRLKAFGMRVIGYDRSPK--------PE-EGAD----E--FGVEYVSLDELLAQAD 93 (178)
T ss_dssp TSEEEEESTSHHH-------HHHHHHHHHTT-EEEEEESSCH--------HH-HHHH----H--TTEEESSHHHHHHH-S
T ss_pred CCEEEEEEEcCCc-------CeEeeeeecCCceeEEecccCC--------hh-hhcc----c--ccceeeehhhhcchhh
Confidence 4667788888877 4555666666888776554321 00 0010 0 2236678888999999
Q ss_pred CCceeeccCchhHHHHhhcCCcEEeccccC--chhhhHHHHhhhhcce-eEec-----ccCHHHHHHHHH
Q 018483 248 VGGFWSHCGWNSTLESICEGVPMLCKPFFG--DQNLNMRYVCDVWNVG-LELE-----EFEGGTIKKAIK 309 (355)
Q Consensus 248 ~~~~I~HgG~~s~~eal~~GvP~l~~P~~~--DQ~~na~~~~~~~g~g-~~l~-----~~~~~~l~~ai~ 309 (355)
+ ++.|+ |... .+..|+..+.. ++-| +.++ -++.+.|.++++
T Consensus 94 i--v~~~~------------------plt~~T~~li~~~~l~~-mk~ga~lvN~aRG~~vde~aL~~aL~ 142 (178)
T PF02826_consen 94 I--VSLHL------------------PLTPETRGLINAEFLAK-MKPGAVLVNVARGELVDEDALLDALE 142 (178)
T ss_dssp E--EEE-S------------------SSSTTTTTSBSHHHHHT-STTTEEEEESSSGGGB-HHHHHHHHH
T ss_pred h--hhhhh------------------ccccccceeeeeeeeec-cccceEEEeccchhhhhhhHHHHHHh
Confidence 7 66665 5443 56778888877 6655 4444 467777776665
No 214
>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional
Probab=28.74 E-value=1.6e+02 Score=29.40 Aligned_cols=31 Identities=13% Similarity=0.051 Sum_probs=25.1
Q ss_pred cccCCceeeccCchhHHHHhhcCCcEEecccc
Q 018483 245 NDAVGGFWSHCGWNSTLESICEGVPMLCKPFF 276 (355)
Q Consensus 245 ~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~ 276 (355)
+..++++|+.||....... +..+|+|-++..
T Consensus 62 ~~~~dviIsrG~ta~~i~~-~~~iPVv~i~~s 92 (538)
T PRK15424 62 TERCDAIIAAGSNGAYLKS-RLSVPVILIKPS 92 (538)
T ss_pred hCCCcEEEECchHHHHHHh-hCCCCEEEecCC
Confidence 3345559999999999888 467999999985
No 215
>TIGR02329 propionate_PrpR propionate catabolism operon regulatory protein PrpR. At least five distinct pathways exists for the catabolism of propionate by way of propionyl-CoA. Members of this family represent the transcriptional regulatory protein PrpR, whose gene is found in most cases divergently transcribed from an operon for the methylcitric acid cycle of propionate catabolism. 2-methylcitric acid, a catabolite by this pathway, is a coactivator of PrpR.
Probab=28.65 E-value=1.7e+02 Score=29.28 Aligned_cols=31 Identities=10% Similarity=-0.018 Sum_probs=24.7
Q ss_pred cccCCceeeccCchhHHHHhhcCCcEEecccc
Q 018483 245 NDAVGGFWSHCGWNSTLESICEGVPMLCKPFF 276 (355)
Q Consensus 245 ~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~ 276 (355)
+..++++|+.||....... +..+|+|-++..
T Consensus 52 ~~~~dviIsrG~ta~~i~~-~~~iPVv~i~~s 82 (526)
T TIGR02329 52 AERCDVVVAGGSNGAYLKS-RLSLPVIVIKPT 82 (526)
T ss_pred hCCCcEEEECchHHHHHHH-hCCCCEEEecCC
Confidence 3345569999999888887 457999999985
No 216
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.
Probab=28.12 E-value=7.3e+02 Score=26.25 Aligned_cols=97 Identities=8% Similarity=0.020 Sum_probs=57.4
Q ss_pred hhhcccCCceeec-----cCchhHHHHhhcCCcEEeccc--cCchhhhHHHHhhhhcceeEec------------ccCHH
Q 018483 242 VLANDAVGGFWSH-----CGWNSTLESICEGVPMLCKPF--FGDQNLNMRYVCDVWNVGLELE------------EFEGG 302 (355)
Q Consensus 242 ~L~~~~~~~~I~H-----gG~~s~~eal~~GvP~l~~P~--~~DQ~~na~~~~~~~g~g~~l~------------~~~~~ 302 (355)
|.+-+++=+..+. ||.+.+ -|+..|++.+.+-- +.+-+ +. +.|..+. ..+++
T Consensus 563 LvaG~DvwLn~prrp~EAsGTSgM-KA~~NG~LnlSvlDGww~E~~-~g-------~nGwaig~~~~~~~~~~~d~~da~ 633 (778)
T cd04299 563 LVQGVDVWLNTPRRPLEASGTSGM-KAALNGGLNLSVLDGWWDEGY-DG-------ENGWAIGDGDEYEDDEYQDAEEAE 633 (778)
T ss_pred HHhhhhhcccCCCCCCCCCccchH-HHHHcCCeeeecccCcccccc-CC-------CCceEeCCCccccChhhcchhhHH
Confidence 5667777667777 887554 55559999999865 22222 22 2233332 26667
Q ss_pred HHHHHHHHHhcCchhHHHHHH-----HHHHHHHHhhhhhc---CCChHHHHHHHHHH
Q 018483 303 TIKKAIKRLMVDTEGKEMRKK-----AIHLKEKVELPLKE---GGSCYNSLNDLVKK 351 (355)
Q Consensus 303 ~l~~ai~~~l~~~~~~~~~~~-----a~~l~~~~~~a~~~---~g~~~~~~~~~~~~ 351 (355)
.|.+.+.+-+- +.|.++ -.++-+++++++.. .-++.+.+++-++.
T Consensus 634 ~Ly~~Le~~i~----p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~ 686 (778)
T cd04299 634 ALYDLLENEVI----PLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVER 686 (778)
T ss_pred HHHHHHHHHHH----HHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHH
Confidence 77777753222 345443 44577777777665 66677766665543
No 217
>TIGR00147 lipid kinase, YegS/Rv2252/BmrU family. The E. coli member of this family, YegS has been purified and shown to have phosphatidylglycerol kinase activity. The member from M. tuberculosis, Rv2252, has diacylglycerol kinase activity. BmrU from B. subtilis is in an operon with multidrug efflux transporter Bmr, but is uncharacterized.
Probab=27.36 E-value=2.2e+02 Score=25.61 Aligned_cols=28 Identities=21% Similarity=0.259 Sum_probs=20.6
Q ss_pred CCceeeccCchhHHHHhhc-----CCcEEe-ccc
Q 018483 248 VGGFWSHCGWNSTLESICE-----GVPMLC-KPF 275 (355)
Q Consensus 248 ~~~~I~HgG~~s~~eal~~-----GvP~l~-~P~ 275 (355)
.+.+|.-||-||+.|++.. ..|.++ +|.
T Consensus 58 ~d~ivv~GGDGTl~~v~~~l~~~~~~~~lgiiP~ 91 (293)
T TIGR00147 58 VDTVIAGGGDGTINEVVNALIQLDDIPALGILPL 91 (293)
T ss_pred CCEEEEECCCChHHHHHHHHhcCCCCCcEEEEcC
Confidence 3459999999999996643 345554 996
No 218
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=27.08 E-value=5.4e+02 Score=24.31 Aligned_cols=144 Identities=12% Similarity=0.156 Sum_probs=81.5
Q ss_pred CCCceEEEeeccccccCHHHHHHHHHHHHh---------CCC-CEEEEEcCCCcCCCCcccCCChhhhhhc----CCCCc
Q 018483 167 APKSVIYVSFGSIASIDEKELLETAWGLAN---------CEQ-PFLWVVRPGLVRGSNCLELLPINFQDSV----GERGC 232 (355)
Q Consensus 167 ~~~~~v~vs~GS~~~~~~~~~~~~~~~l~~---------~~~-~~i~~~~~~~~~~~~~~~~lp~~~~~~~----~~~~~ 232 (355)
++++.++||--|- .+.+.+..+++|+.. .+. .++..+.+.. .+.+.+.... =.++.
T Consensus 252 ~~~pallvsSTsw--TpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGKG--------PlkE~Y~~~I~~~~~~~v~ 321 (444)
T KOG2941|consen 252 PERPALLVSSTSW--TPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGKG--------PLKEKYSQEIHEKNLQHVQ 321 (444)
T ss_pred cCCCeEEEecCCC--CCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCCC--------chhHHHHHHHHHhccccee
Confidence 4577888874333 466777788888862 222 3444444321 1222222211 12333
Q ss_pred e-eecCC---hHhhhhcccCCceeeccCch-----hHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEecccCHHH
Q 018483 233 I-VEWAP---QKEVLANDAVGGFWSHCGWN-----STLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFEGGT 303 (355)
Q Consensus 233 ~-~~~~p---q~~~L~~~~~~~~I~HgG~~-----s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~ 303 (355)
+ ..|+. .-.+|+.+++++.+|-...| -+..-.-+|+|++.+-+ ..-..++++-.-|... -+.++
T Consensus 322 ~~tpWL~aEDYP~ll~saDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~f-----kcl~ELVkh~eNGlvF--~Ds~e 394 (444)
T KOG2941|consen 322 VCTPWLEAEDYPKLLASADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNF-----KCLDELVKHGENGLVF--EDSEE 394 (444)
T ss_pred eeecccccccchhHhhccccceEeeecCcccCcchhHHHhhcCCCceeeecc-----hhHHHHHhcCCCceEe--ccHHH
Confidence 3 47864 44588999998888766554 46677778888887743 2223333322345554 45778
Q ss_pred HHHHHHHHhc----Cch-hHHHHHHHHHH
Q 018483 304 IKKAIKRLMV----DTE-GKEMRKKAIHL 327 (355)
Q Consensus 304 l~~ai~~~l~----~~~-~~~~~~~a~~l 327 (355)
+.+.+.-++. |.+ ..++++|+++-
T Consensus 395 La~ql~~lf~~fp~~a~~l~~lkkn~~e~ 423 (444)
T KOG2941|consen 395 LAEQLQMLFKNFPDNADELNQLKKNLREE 423 (444)
T ss_pred HHHHHHHHHhcCCCCHHHHHHHHHhhHHH
Confidence 8888888886 322 34555555544
No 219
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=27.08 E-value=7.6e+02 Score=26.34 Aligned_cols=167 Identities=10% Similarity=0.128 Sum_probs=89.3
Q ss_pred CCceEEEeeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCcCCCC---cccCCChhhhhhcCCCCce---eecCCh--
Q 018483 168 PKSVIYVSFGSIASIDEKELLETAWGLANCEQPFLWVVRPGLVRGSN---CLELLPINFQDSVGERGCI---VEWAPQ-- 239 (355)
Q Consensus 168 ~~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~---~~~~lp~~~~~~~~~~~~~---~~~~pq-- 239 (355)
+...+|+.+=-+...+....+..++.+.+.|.+|+..++.+...... ... +..+-. ..+...+. .+-+|.
T Consensus 570 E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iG-i~~~~e-d~~~~~~TG~efD~ls~~~ 647 (972)
T KOG0202|consen 570 ESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIG-IFSEDE-DVSSMALTGSEFDDLSDEE 647 (972)
T ss_pred ccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhC-CCcCCc-cccccccchhhhhcCCHHH
Confidence 34678887655555677888889999999999999999875210000 000 100000 00111111 111221
Q ss_pred -HhhhhcccCCceeeccCc---hhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEecccCHHHHHHHHHHHhcCc
Q 018483 240 -KEVLANDAVGGFWSHCGW---NSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFEGGTIKKAIKRLMVDT 315 (355)
Q Consensus 240 -~~~L~~~~~~~~I~HgG~---~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~l~~ai~~~l~~~ 315 (355)
.++..++. ++.++-- .-+.|++..-.=++.+ .+|.-.-|-.+.. ..+|+.+..-..+--.+|-.=+|.|
T Consensus 648 ~~~~~~~~~---vFaR~~P~HK~kIVeaLq~~geivAM--TGDGVNDApALK~-AdIGIAMG~~GTdVaKeAsDMVL~D- 720 (972)
T KOG0202|consen 648 LDDAVRRVL---VFARAEPQHKLKIVEALQSRGEVVAM--TGDGVNDAPALKK-ADIGIAMGISGTDVAKEASDMVLAD- 720 (972)
T ss_pred HHHHhhcce---EEEecCchhHHHHHHHHHhcCCEEEe--cCCCccchhhhhh-cccceeecCCccHhhHhhhhcEEec-
Confidence 11222222 3444432 2466777766666554 6888777777755 5777776522222333444445666
Q ss_pred hhHHHHHHHHHHHHHHhhhhhcCCChHHHHHHHHHHHH
Q 018483 316 EGKEMRKKAIHLKEKVELPLKEGGSCYNSLNDLVKKIL 353 (355)
Q Consensus 316 ~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~l~ 353 (355)
+.+.. +-+|++||.+-+.|++.||.++.
T Consensus 721 --DnFst--------IvaAVEEGr~IynNik~Fir~~l 748 (972)
T KOG0202|consen 721 --DNFST--------IVAAVEEGRAIYNNIKNFIRYLL 748 (972)
T ss_pred --CcHHH--------HHHHHHHhHHHHHHHHHHHHHHH
Confidence 33322 33355577777778888877654
No 220
>PRK01231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=27.07 E-value=1.3e+02 Score=27.53 Aligned_cols=51 Identities=16% Similarity=0.126 Sum_probs=37.3
Q ss_pred CceeeccCchhHHHHhh----cCCcEEeccccCchhhhHHHHhhhhcceeEecccCHHHHHHHHHHHhcC
Q 018483 249 GGFWSHCGWNSTLESIC----EGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFEGGTIKKAIKRLMVD 314 (355)
Q Consensus 249 ~~~I~HgG~~s~~eal~----~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~l~~ai~~~l~~ 314 (355)
+++|+=||-||+++++. .++|++++... .+|. +.+++.+++.++|.+++++
T Consensus 64 d~vi~~GGDGt~l~~~~~~~~~~~Pvlgin~G--------------~lGF-l~~~~~~~~~~~l~~~~~g 118 (295)
T PRK01231 64 DLVIVVGGDGSLLGAARALARHNVPVLGINRG--------------RLGF-LTDIRPDELEFKLAEVLDG 118 (295)
T ss_pred CEEEEEeCcHHHHHHHHHhcCCCCCEEEEeCC--------------cccc-cccCCHHHHHHHHHHHHcC
Confidence 44999999999999975 37788888631 1221 1267788888999888865
No 221
>PRK04761 ppnK inorganic polyphosphate/ATP-NAD kinase; Reviewed
Probab=26.91 E-value=58 Score=28.89 Aligned_cols=27 Identities=15% Similarity=0.083 Sum_probs=22.0
Q ss_pred CceeeccCchhHHHHhhc----CCcEEeccc
Q 018483 249 GGFWSHCGWNSTLESICE----GVPMLCKPF 275 (355)
Q Consensus 249 ~~~I~HgG~~s~~eal~~----GvP~l~~P~ 275 (355)
+++|+-||-||++.|+.. ++|++++-.
T Consensus 27 Dlvi~iGGDGTlL~a~~~~~~~~~PvlGIN~ 57 (246)
T PRK04761 27 DVIVALGGDGFMLQTLHRYMNSGKPVYGMNR 57 (246)
T ss_pred CEEEEECCCHHHHHHHHHhcCCCCeEEEEeC
Confidence 459999999999988654 789888753
No 222
>PRK14076 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=26.62 E-value=1e+02 Score=31.05 Aligned_cols=52 Identities=27% Similarity=0.392 Sum_probs=38.0
Q ss_pred CCceeeccCchhHHHHhhc----CCcEEeccccCchhhhHHHHhhhhcceeEecccCHHHHHHHHHHHhcC
Q 018483 248 VGGFWSHCGWNSTLESICE----GVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFEGGTIKKAIKRLMVD 314 (355)
Q Consensus 248 ~~~~I~HgG~~s~~eal~~----GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~l~~ai~~~l~~ 314 (355)
++++|+-||-||++.+... ++|++++-+. .+|. +.+++.+++.+++.+++++
T Consensus 349 ~dlvi~lGGDGT~L~aa~~~~~~~~PilGin~G--------------~lGF-L~~~~~~~~~~~l~~~~~g 404 (569)
T PRK14076 349 ISHIISIGGDGTVLRASKLVNGEEIPIICINMG--------------TVGF-LTEFSKEEIFKAIDSIISG 404 (569)
T ss_pred CCEEEEECCcHHHHHHHHHhcCCCCCEEEEcCC--------------CCCc-CcccCHHHHHHHHHHHHcC
Confidence 4569999999999999763 7898888431 1121 2266778888888888876
No 223
>PF10083 DUF2321: Uncharacterized protein conserved in bacteria (DUF2321); InterPro: IPR016891 This entry is represented by Bacteriophage 'Lactobacillus prophage Lj928', Orf-Ljo1454. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=26.31 E-value=1.1e+02 Score=24.80 Aligned_cols=66 Identities=17% Similarity=0.232 Sum_probs=43.0
Q ss_pred ccccCchhhhHHHHhhhhcceeEecccC---HHHHHHHHHHHhcCchhHHHHHHHHHHHHHHhhhhhcCCChHHHHHHHH
Q 018483 273 KPFFGDQNLNMRYVCDVWNVGLELEEFE---GGTIKKAIKRLMVDTEGKEMRKKAIHLKEKVELPLKEGGSCYNSLNDLV 349 (355)
Q Consensus 273 ~P~~~DQ~~na~~~~~~~g~g~~l~~~~---~~~l~~ai~~~l~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~ 349 (355)
.|..-.+..+|+.+.+. +++++ .+.|.+.+.+++.|. ++-+-.+.+++..+.++ |.+....+.+++
T Consensus 78 yPWt~~~L~aa~el~ee------~eeLs~deke~~~~sl~dL~~d~--PkT~vA~~rfKk~~~K~---g~~v~~~~~dIl 146 (158)
T PF10083_consen 78 YPWTENALEAANELIEE------DEELSPDEKEQFKESLPDLTKDT--PKTKVAATRFKKILSKA---GSIVGDAIRDIL 146 (158)
T ss_pred CchHHHHHHHHHHHHHH------hhcCCHHHHHHHHhhhHHHhhcC--CccHHHHHHHHHHHHHH---hHHHHHHHHHHH
Confidence 46556666777766552 23344 566899999998773 67788888888888764 333444454444
No 224
>cd07038 TPP_PYR_PDC_IPDC_like Pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC), indolepyruvate decarboxylase (IPDC) and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC) and indolepyruvate decarboxylase (IPDC) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dimer-of-active sites, for many
Probab=25.85 E-value=1.3e+02 Score=24.52 Aligned_cols=28 Identities=21% Similarity=0.260 Sum_probs=21.6
Q ss_pred CCceeeccCc------hhHHHHhhcCCcEEeccc
Q 018483 248 VGGFWSHCGW------NSTLESICEGVPMLCKPF 275 (355)
Q Consensus 248 ~~~~I~HgG~------~s~~eal~~GvP~l~~P~ 275 (355)
.+++++|.|- +.+.||...++|+|++.-
T Consensus 60 ~gv~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i~g 93 (162)
T cd07038 60 LGALVTTYGVGELSALNGIAGAYAEHVPVVHIVG 93 (162)
T ss_pred CEEEEEcCCccHHHHHHHHHHHHHcCCCEEEEec
Confidence 4447777764 478899999999999963
No 225
>cd07035 TPP_PYR_POX_like Pyrimidine (PYR) binding domain of POX and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate oxidase (POX) and related protiens subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. A polar interaction between the conserved glutamate of the PYR domain and the N1' of the TPP aminopyrimidine ring is shared by most TPP-dependent enzymes, and participates in the activation of TPP. For glyoxylate carboligase, which belongs to this subfamily, but lacks this conserved glutamate, the rate of the initial TPP activation step is reduced but the ensuing steps of the enzymic reaction proceed efficiently. The PYR and PP domains have a common fold, but do not share strong sequence conservatio
Probab=25.60 E-value=1.1e+02 Score=24.36 Aligned_cols=28 Identities=14% Similarity=0.156 Sum_probs=21.9
Q ss_pred CCceeeccCc------hhHHHHhhcCCcEEeccc
Q 018483 248 VGGFWSHCGW------NSTLESICEGVPMLCKPF 275 (355)
Q Consensus 248 ~~~~I~HgG~------~s~~eal~~GvP~l~~P~ 275 (355)
..++++|+|- +.+.+|...++|+|++.-
T Consensus 60 ~~v~~~~~gpG~~n~~~~l~~A~~~~~Pll~i~~ 93 (155)
T cd07035 60 PGVVLVTSGPGLTNAVTGLANAYLDSIPLLVITG 93 (155)
T ss_pred CEEEEEcCCCcHHHHHHHHHHHHhhCCCEEEEeC
Confidence 3348888664 478899999999999964
No 226
>TIGR03837 efp_adjacent_2 conserved hypothetical protein, PP_1857 family. This model describes a conserved hypothetical protein that typically is encoded next to the gene efp for translation elongation factor P. The function is unknown.
Probab=25.57 E-value=1.6e+02 Score=27.79 Aligned_cols=92 Identities=18% Similarity=0.231 Sum_probs=57.2
Q ss_pred ccccCHHHHHHHHHHHHhCCCCEEEEEcCCCcCCC--Ccc--cCC-ChhhhhhcCCCCc--eeecCChH---hhhhcccC
Q 018483 179 IASIDEKELLETAWGLANCEQPFLWVVRPGLVRGS--NCL--ELL-PINFQDSVGERGC--IVEWAPQK---EVLANDAV 248 (355)
Q Consensus 179 ~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~--~~~--~~l-p~~~~~~~~~~~~--~~~~~pq~---~~L~~~~~ 248 (355)
.....+..+..+++.+.+.+.++...+..+...+. ..+ ..+ +... ...++.. +.+++||. .+|-.+++
T Consensus 187 LF~Ye~~al~~ll~~~~~~~~pv~lLvp~Gr~~~~v~~~l~~~~~~~g~~--~~~g~L~~~~LPf~~Q~~yD~LLW~cD~ 264 (371)
T TIGR03837 187 LFCYENAALPALLDALAQSGSPVHLLVPEGRALAAVAAWLGDALLAAGDV--HRRGALTVAVLPFVPQDDYDRLLWACDL 264 (371)
T ss_pred EEecCChhHHHHHHHHHhCCCCeEEEecCCccHHHHHHHhCccccCCccc--cccCceEEEEcCCCChhhHHHHHHhChh
Confidence 34567788999999999888887666654421110 000 000 0111 1123323 35899986 48888887
Q ss_pred CceeeccCchhHHHHhhcCCcEEeccc
Q 018483 249 GGFWSHCGWNSTLESICEGVPMLCKPF 275 (355)
Q Consensus 249 ~~~I~HgG~~s~~eal~~GvP~l~~P~ 275 (355)
-||- |-=|+.-|..+|+|+|=-.+
T Consensus 265 -NfVR--GEDSFVRAqWAgkPfvWhIY 288 (371)
T TIGR03837 265 -NFVR--GEDSFVRAQWAGKPFVWHIY 288 (371)
T ss_pred -cEee--chhHHHHHHHcCCCceeecc
Confidence 3443 78899999999999996544
No 227
>PRK08322 acetolactate synthase; Reviewed
Probab=25.16 E-value=4.2e+02 Score=26.33 Aligned_cols=28 Identities=21% Similarity=0.214 Sum_probs=22.9
Q ss_pred cCCceeeccCc------hhHHHHhhcCCcEEecc
Q 018483 247 AVGGFWSHCGW------NSTLESICEGVPMLCKP 274 (355)
Q Consensus 247 ~~~~~I~HgG~------~s~~eal~~GvP~l~~P 274 (355)
+.+++++|.|- +++.+|...++|+|++-
T Consensus 63 ~~gv~~~t~GpG~~N~~~~i~~A~~~~~Pll~i~ 96 (547)
T PRK08322 63 KAGVCLSTLGPGATNLVTGVAYAQLGGMPMVAIT 96 (547)
T ss_pred CCEEEEECCCccHhHHHHHHHHHhhcCCCEEEEe
Confidence 34558888874 48899999999999985
No 228
>PRK13059 putative lipid kinase; Reviewed
Probab=24.97 E-value=2.9e+02 Score=24.98 Aligned_cols=27 Identities=11% Similarity=0.009 Sum_probs=22.1
Q ss_pred CceeeccCchhHHHHh------hcCCcEEeccc
Q 018483 249 GGFWSHCGWNSTLESI------CEGVPMLCKPF 275 (355)
Q Consensus 249 ~~~I~HgG~~s~~eal------~~GvP~l~~P~ 275 (355)
+.+|.-||-||+.|++ ..++|+-++|.
T Consensus 58 d~vi~~GGDGTv~evv~gl~~~~~~~~lgviP~ 90 (295)
T PRK13059 58 KYILIAGGDGTVDNVVNAMKKLNIDLPIGILPV 90 (295)
T ss_pred CEEEEECCccHHHHHHHHHHhcCCCCcEEEECC
Confidence 4599999999998885 23589999997
No 229
>PHA00490 terminal protein
Probab=24.97 E-value=2.4e+02 Score=24.02 Aligned_cols=38 Identities=13% Similarity=0.188 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHHhhhhhcCCChHHHHHHHHHHHHcC
Q 018483 318 KEMRKKAIHLKEKVELPLKEGGSCYNSLNDLVKKILSF 355 (355)
Q Consensus 318 ~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~l~~~ 355 (355)
.-|.+++++|..-+-+.+...-.|.-..|++|+.|+++
T Consensus 173 ~YYe~~m~qlq~NFI~sVEgsFNS~~~aDelve~Lkki 210 (266)
T PHA00490 173 AYYEESMRQLQDNFIRSVEGSFNSYWEADELVEKLKKI 210 (266)
T ss_pred HHHHHHHHHHHHHHHHHHhccccchhhHHHHHHHHhcC
Confidence 46888999999999888877778888999999999875
No 230
>PRK05299 rpsB 30S ribosomal protein S2; Provisional
Probab=24.96 E-value=58 Score=29.13 Aligned_cols=34 Identities=15% Similarity=0.214 Sum_probs=26.1
Q ss_pred CCccEE-EeCCcc-chHHHHHHHcCCCeEEEecchH
Q 018483 9 DRISCI-VYDSTM-CFSQSVADHLKLPGICVRTSPA 42 (355)
Q Consensus 9 ~~~D~v-I~D~~~-~~~~~iA~~lgiP~i~~~~~~~ 42 (355)
..||+| |.|+.- ..+..=|.++|||+|++.-+.+
T Consensus 156 ~~Pd~iii~d~~~~~~ai~Ea~kl~IPiIaivDTn~ 191 (258)
T PRK05299 156 GLPDALFVVDPNKEHIAVKEARKLGIPVVAIVDTNC 191 (258)
T ss_pred cCCCEEEEeCCCccHHHHHHHHHhCCCEEEEeeCCC
Confidence 368877 667754 5677789999999999876643
No 231
>PRK08673 3-deoxy-7-phosphoheptulonate synthase; Reviewed
Probab=24.52 E-value=4.3e+02 Score=24.66 Aligned_cols=86 Identities=15% Similarity=0.146 Sum_probs=46.1
Q ss_pred HHHHHHHhCCCCEEEEEcCCCcCCCCcccCCChhhhhhcCCCCceeecCChH-hhhhcccCCceeeccCchhH-------
Q 018483 189 ETAWGLANCEQPFLWVVRPGLVRGSNCLELLPINFQDSVGERGCIVEWAPQK-EVLANDAVGGFWSHCGWNST------- 260 (355)
Q Consensus 189 ~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~pq~-~~L~~~~~~~~I~HgG~~s~------- 260 (355)
.+++.+++.+.+++.+.+-.. -++ +|.--. .+.+..+-.+.++|+|..|.
T Consensus 191 ~LL~~va~~~kPViLk~G~~~---------ti~-------------E~l~A~e~i~~~GN~~viL~erG~~tf~~~~~~~ 248 (335)
T PRK08673 191 DLLKEVGKTNKPVLLKRGMSA---------TIE-------------EWLMAAEYILAEGNPNVILCERGIRTFETATRNT 248 (335)
T ss_pred HHHHHHHcCCCcEEEeCCCCC---------CHH-------------HHHHHHHHHHHcCCCeEEEEECCCCCCCCcChhh
Confidence 356666677888887765421 011 221111 13333333448899876333
Q ss_pred -----HHHh--hcCCcEEeccccCch-----hhhHHHHhhhhcc-eeEec
Q 018483 261 -----LESI--CEGVPMLCKPFFGDQ-----NLNMRYVCDVWNV-GLELE 297 (355)
Q Consensus 261 -----~eal--~~GvP~l~~P~~~DQ-----~~na~~~~~~~g~-g~~l~ 297 (355)
...+ ..+.|+++-|-+.-- ..-+..... +|+ |+.+.
T Consensus 249 ldl~ai~~lk~~~~lPVi~d~sH~~G~~~~v~~~a~AAvA-~GAdGliIE 297 (335)
T PRK08673 249 LDLSAVPVIKKLTHLPVIVDPSHATGKRDLVEPLALAAVA-AGADGLIVE 297 (335)
T ss_pred hhHHHHHHHHHhcCCCEEEeCCCCCccccchHHHHHHHHH-hCCCEEEEE
Confidence 1111 247999999876422 234455555 677 66776
No 232
>TIGR02836 spore_IV_A stage IV sporulation protein A. A comparative genome analysis of all sequenced genomes of shows a number of proteins conserved strictly among the endospore-forming subset of the Firmicutes. This protein, a member of this panel, is designated stage IV sporulation protein A. It acts in the mother cell compartment and plays a role in spore coat morphogenesis.
Probab=24.35 E-value=2.7e+02 Score=27.11 Aligned_cols=72 Identities=11% Similarity=0.126 Sum_probs=49.0
Q ss_pred hhhh-cccCCceeeccCc--------------hhHHHHhhcCCcEEeccccCc-----hhhhHHHHhhhhcce-eEec--
Q 018483 241 EVLA-NDAVGGFWSHCGW--------------NSTLESICEGVPMLCKPFFGD-----QNLNMRYVCDVWNVG-LELE-- 297 (355)
Q Consensus 241 ~~L~-~~~~~~~I~HgG~--------------~s~~eal~~GvP~l~~P~~~D-----Q~~na~~~~~~~g~g-~~l~-- 297 (355)
.++. |++++++||-.|. -.+.|.-..|+|.+++=-..| ...-+..+++++++- +.++
T Consensus 139 kVI~dhstIgivVtTDgsi~dI~Re~y~~aEe~~i~eLk~~~kPfiivlN~~dp~~~et~~l~~~l~eky~vpvl~v~c~ 218 (492)
T TIGR02836 139 KVIQEHSTIGVVVTTDGTITDIPREDYVEAEERVIEELKELNKPFIILLNSTHPYHPETEALRQELEEKYDVPVLAMDVE 218 (492)
T ss_pred HHHHhcCcEEEEEEcCCCccccccccchHHHHHHHHHHHhcCCCEEEEEECcCCCCchhHHHHHHHHHHhCCceEEEEHH
Confidence 4566 9999999995552 256666778999998754444 111233455545654 3444
Q ss_pred ccCHHHHHHHHHHHh
Q 018483 298 EFEGGTIKKAIKRLM 312 (355)
Q Consensus 298 ~~~~~~l~~ai~~~l 312 (355)
.++.+++.+.++++|
T Consensus 219 ~l~~~DI~~il~~vL 233 (492)
T TIGR02836 219 SMRESDILSVLEEVL 233 (492)
T ss_pred HcCHHHHHHHHHHHH
Confidence 899999999999987
No 233
>TIGR02482 PFKA_ATP 6-phosphofructokinase. 6-phosphofructokinase (EC 2.7.1.11) catalyzes the addition of phosphate from ATP to fructose 6-phosphate to give fructose 1,6-bisphosphate. This represents a key control step in glycolysis. This model hits bacterial ATP-dependent 6-phosphofructokinases which lack a beta-hairpin loop present in TIGR02483 family members. TIGR02483 contains members that are ATP-dependent as well as members that are pyrophosphate-dependent. TIGR02477 represents the pyrophosphate-dependent phosphofructokinase, diphosphate--fructose-6-phosphate 1-phosphotransferase (EC 2.7.1.90).
Probab=24.08 E-value=88 Score=28.68 Aligned_cols=37 Identities=22% Similarity=0.141 Sum_probs=30.1
Q ss_pred hhhcccCCceeeccCchhHHHHhh----cCCcEEeccccCc
Q 018483 242 VLANDAVGGFWSHCGWNSTLESIC----EGVPMLCKPFFGD 278 (355)
Q Consensus 242 ~L~~~~~~~~I~HgG~~s~~eal~----~GvP~l~~P~~~D 278 (355)
.|..-+++.+|.=||-+|+.-|.. .++|++++|-.-|
T Consensus 86 ~l~~~~Id~Li~IGGdgs~~~a~~L~e~~~i~vigiPkTID 126 (301)
T TIGR02482 86 NLKKLGIEGLVVIGGDGSYTGAQKLYEEGGIPVIGLPGTID 126 (301)
T ss_pred HHHHcCCCEEEEeCCchHHHHHHHHHHhhCCCEEeeccccc
Confidence 466678888999999999876653 7999999998644
No 234
>cd07037 TPP_PYR_MenD Pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate synthase (MenD) and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate (SEPHCHC) synthase (MenD) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dim
Probab=23.90 E-value=70 Score=26.28 Aligned_cols=28 Identities=21% Similarity=0.260 Sum_probs=22.1
Q ss_pred CCceeeccCc------hhHHHHhhcCCcEEeccc
Q 018483 248 VGGFWSHCGW------NSTLESICEGVPMLCKPF 275 (355)
Q Consensus 248 ~~~~I~HgG~------~s~~eal~~GvP~l~~P~ 275 (355)
.+++++|+|- +.+.||...++|+|++.-
T Consensus 61 ~gv~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i~g 94 (162)
T cd07037 61 PVAVVCTSGTAVANLLPAVVEAYYSGVPLLVLTA 94 (162)
T ss_pred CEEEEECCchHHHHHhHHHHHHHhcCCCEEEEEC
Confidence 3448888885 477899999999999953
No 235
>TIGR00624 tag DNA-3-methyladenine glycosylase I. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=23.87 E-value=2.2e+02 Score=23.89 Aligned_cols=44 Identities=20% Similarity=0.280 Sum_probs=28.6
Q ss_pred eccccCchhhhHHHHhhhhcceeEec--------------ccCHHHH----HHHHHHHhcCc
Q 018483 272 CKPFFGDQNLNMRYVCDVWNVGLELE--------------EFEGGTI----KKAIKRLMVDT 315 (355)
Q Consensus 272 ~~P~~~DQ~~na~~~~~~~g~g~~l~--------------~~~~~~l----~~ai~~~l~~~ 315 (355)
+.|...||..-...+-+.+.+|+... .++.+.+ .+-|.++|.|+
T Consensus 21 G~p~~dd~~LFE~L~Le~fQAGLSW~tIL~Kr~~fr~aF~~Fd~~~VA~~~e~~ie~L~~d~ 82 (179)
T TIGR00624 21 GVPLRDSVALFERMSLEGFQAGLSWITVLRKRENYRRAFSGFDIVKVARMTDADVERLLQDD 82 (179)
T ss_pred CCcCcCCHHHHHHHHHHHHhCcCCHHHHHHhHHHHHHHHcCCCHHHHhCCCHHHHHHHhcCc
Confidence 45678999888776555577787664 2444444 34566788874
No 236
>PRK08155 acetolactate synthase catalytic subunit; Validated
Probab=23.87 E-value=1.3e+02 Score=30.11 Aligned_cols=28 Identities=11% Similarity=0.267 Sum_probs=22.4
Q ss_pred cCCceeeccCc------hhHHHHhhcCCcEEecc
Q 018483 247 AVGGFWSHCGW------NSTLESICEGVPMLCKP 274 (355)
Q Consensus 247 ~~~~~I~HgG~------~s~~eal~~GvP~l~~P 274 (355)
..+++++|.|- +++.||...++|+|++-
T Consensus 76 ~~gv~~~t~GpG~~N~l~gl~~A~~~~~Pvl~i~ 109 (564)
T PRK08155 76 KPAVCMACSGPGATNLVTAIADARLDSIPLVCIT 109 (564)
T ss_pred CCeEEEECCCCcHHHHHHHHHHHHhcCCCEEEEe
Confidence 34458888774 47899999999999985
No 237
>COG3618 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]
Probab=23.30 E-value=5.5e+02 Score=23.25 Aligned_cols=48 Identities=25% Similarity=0.199 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHhCCCCEEEEEcCCCcCCCCcccCCChhhhhhcCCCCceeecCChHhhhhcccCCceeeccCc
Q 018483 185 KELLETAWGLANCEQPFLWVVRPGLVRGSNCLELLPINFQDSVGERGCIVEWAPQKEVLANDAVGGFWSHCGW 257 (355)
Q Consensus 185 ~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~pq~~~L~~~~~~~~I~HgG~ 257 (355)
..+++.++.|.+.+..|=..+... ++|..+ ..+...|++.++|.|||.
T Consensus 124 ~~~r~~~~rL~~~gl~fdl~~~~~---------ql~~~i----------------~l~~~~Pd~~~VldH~G~ 171 (279)
T COG3618 124 PAWRANVERLAKLGLHFDLQVDPH---------QLPDLI----------------PLALKAPDVNFVLDHCGR 171 (279)
T ss_pred HHHHHHHHHHHhcCCeEEEEeChh---------hhHHHH----------------HHHhhCCCCCEEeccCCC
Confidence 566777777777777766555432 233332 123457888889999985
No 238
>CHL00067 rps2 ribosomal protein S2
Probab=23.27 E-value=66 Score=28.17 Aligned_cols=34 Identities=12% Similarity=0.172 Sum_probs=25.8
Q ss_pred CCccEE-EeCCcc-chHHHHHHHcCCCeEEEecchH
Q 018483 9 DRISCI-VYDSTM-CFSQSVADHLKLPGICVRTSPA 42 (355)
Q Consensus 9 ~~~D~v-I~D~~~-~~~~~iA~~lgiP~i~~~~~~~ 42 (355)
..||+| |.|+.- ..+..=|..+|||++++.-+.+
T Consensus 160 ~~P~~iiv~d~~~~~~ai~Ea~~l~IPvIaivDTn~ 195 (230)
T CHL00067 160 KLPDIVIIIDQQEEYTALRECRKLGIPTISILDTNC 195 (230)
T ss_pred cCCCEEEEeCCcccHHHHHHHHHcCCCEEEEEeCCC
Confidence 368877 667754 4677789999999999876654
No 239
>TIGR01011 rpsB_bact ribosomal protein S2, bacterial type. TIGR01012 describes the archaeal and cytosolic forms.
Probab=23.19 E-value=66 Score=28.08 Aligned_cols=34 Identities=15% Similarity=0.192 Sum_probs=26.0
Q ss_pred CCccEE-EeCCcc-chHHHHHHHcCCCeEEEecchH
Q 018483 9 DRISCI-VYDSTM-CFSQSVADHLKLPGICVRTSPA 42 (355)
Q Consensus 9 ~~~D~v-I~D~~~-~~~~~iA~~lgiP~i~~~~~~~ 42 (355)
..||+| |.|+.- ..+..=|.++|||.+++.-+.+
T Consensus 154 ~~Pd~vii~d~~~~~~ai~Ea~~l~IP~I~ivDTn~ 189 (225)
T TIGR01011 154 KLPDLLFVIDPVKEKIAVAEARKLGIPVVAIVDTNC 189 (225)
T ss_pred cCCCEEEEeCCCccHHHHHHHHHcCCCEEEEeeCCC
Confidence 368877 667754 5677889999999999876643
No 240
>PRK13010 purU formyltetrahydrofolate deformylase; Reviewed
Probab=22.51 E-value=5.9e+02 Score=23.14 Aligned_cols=114 Identities=6% Similarity=0.008 Sum_probs=69.1
Q ss_pred HHHHHHHHhCCCCEEEEEcCCCcCCCCcccCCChhhhhhcCCCCceeecCChHhhhhcccCCceeeccCchhHHHHhhcC
Q 018483 188 LETAWGLANCEQPFLWVVRPGLVRGSNCLELLPINFQDSVGERGCIVEWAPQKEVLANDAVGGFWSHCGWNSTLESICEG 267 (355)
Q Consensus 188 ~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~pq~~~L~~~~~~~~I~HgG~~s~~eal~~G 267 (355)
.++++.|.+.+..++...+.. ..+++.+.+..+.+.+ =-||++ .=...|.+....|+..|
T Consensus 159 ~~~~~~l~~~~~Dlivlagym--------~il~~~~l~~~~~~ii----------NiHpSl--LP~f~G~~~~~~ai~~G 218 (289)
T PRK13010 159 AQILDLIETSGAELVVLARYM--------QVLSDDLSRKLSGRAI----------NIHHSF--LPGFKGARPYHQAHARG 218 (289)
T ss_pred HHHHHHHHHhCCCEEEEehhh--------hhCCHHHHhhccCCce----------eeCccc--CCCCCCCCHHHHHHHcC
Confidence 346667777777777777653 3356665443333222 225554 44456899999999999
Q ss_pred CcEEecccc--CchhhhHHHHhhhhcceeEec-ccCHHHHHHHHHHHhcCchhHHHHHHHHHHH
Q 018483 268 VPMLCKPFF--GDQNLNMRYVCDVWNVGLELE-EFEGGTIKKAIKRLMVDTEGKEMRKKAIHLK 328 (355)
Q Consensus 268 vP~l~~P~~--~DQ~~na~~~~~~~g~g~~l~-~~~~~~l~~ai~~~l~~~~~~~~~~~a~~l~ 328 (355)
+...++=.+ .+..+.+..+.+ .-+.+. .-|.++|.+.+.++-. .-|-+..+.+.
T Consensus 219 ~k~tG~TvH~v~~~lD~GpII~Q---~~v~V~~~dt~e~L~~r~~~~E~----~~l~~ai~~~~ 275 (289)
T PRK13010 219 VKLIGATAHFVTDDLDEGPIIEQ---DVERVDHSYSPEDLVAKGRDVEC----LTLARAVKAFI 275 (289)
T ss_pred CCeEEEEEEEEcCCCCCCCceEE---EEEEcCCCCCHHHHHHHHHHHHH----HHHHHHHHHHH
Confidence 999887764 344455555533 223333 6678888888776432 35555555444
No 241
>PRK13054 lipid kinase; Reviewed
Probab=22.44 E-value=4e+02 Score=24.08 Aligned_cols=28 Identities=14% Similarity=0.041 Sum_probs=22.8
Q ss_pred CCceeeccCchhHHHHhhc------C--CcEEeccc
Q 018483 248 VGGFWSHCGWNSTLESICE------G--VPMLCKPF 275 (355)
Q Consensus 248 ~~~~I~HgG~~s~~eal~~------G--vP~l~~P~ 275 (355)
.+.+|.-||-||+.|++.. + +|+-++|.
T Consensus 57 ~d~vvv~GGDGTl~evv~~l~~~~~~~~~~lgiiP~ 92 (300)
T PRK13054 57 VATVIAGGGDGTINEVATALAQLEGDARPALGILPL 92 (300)
T ss_pred CCEEEEECCccHHHHHHHHHHhhccCCCCcEEEEeC
Confidence 3459999999999998754 3 58899997
No 242
>PRK03359 putative electron transfer flavoprotein FixA; Reviewed
Probab=22.21 E-value=1e+02 Score=27.47 Aligned_cols=31 Identities=16% Similarity=0.168 Sum_probs=24.5
Q ss_pred CccEEEeCCcc------chHHHHHHHcCCCeEEEecc
Q 018483 10 RISCIVYDSTM------CFSQSVADHLKLPGICVRTS 40 (355)
Q Consensus 10 ~~D~vI~D~~~------~~~~~iA~~lgiP~i~~~~~ 40 (355)
.||+|++-... .-+..+|+.||+|++++.+.
T Consensus 112 ~~DLVl~G~~s~D~~tgqvg~~lAe~Lg~P~vt~v~~ 148 (256)
T PRK03359 112 GFDLILCGDGSSDLYAQQVGLLVGEILNIPAINGVSK 148 (256)
T ss_pred CCCEEEEcCccccCCCCcHHHHHHHHhCCCceeeEEE
Confidence 59999985432 36778999999999997654
No 243
>TIGR00655 PurU formyltetrahydrofolate deformylase. This model describes formyltetrahydrofolate deformylases. The enzyme is a homohexamer. Sequences from a related enzyme formyl tetrahydrofolate-specific enzyme, phosphoribosylglycinamide formyltransferase, serve as an outgroup for phylogenetic analysis. Putative members of this family, scoring below the trusted cutoff, include a sequence from Rhodobacter capsulatus that lacks an otherwise conserved C-terminal region.
Probab=22.07 E-value=5.3e+02 Score=23.30 Aligned_cols=115 Identities=7% Similarity=-0.028 Sum_probs=68.8
Q ss_pred HHHHHHHHHhCCCCEEEEEcCCCcCCCCcccCCChhhhhhcCCCCceeecCChHhhhhcccCCceeeccCchhHHHHhhc
Q 018483 187 LLETAWGLANCEQPFLWVVRPGLVRGSNCLELLPINFQDSVGERGCIVEWAPQKEVLANDAVGGFWSHCGWNSTLESICE 266 (355)
Q Consensus 187 ~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~pq~~~L~~~~~~~~I~HgG~~s~~eal~~ 266 (355)
-.++++.|.+.+..++...+.. ..+|+.+.+..+.+.+ =-||++ .=...|.+.+..|+..
T Consensus 149 e~~~~~~l~~~~~Dlivlagym--------~il~~~~l~~~~~~iI----------NiHpSL--LP~f~G~~p~~~ai~~ 208 (280)
T TIGR00655 149 EKRQLELLKQYQVDLVVLAKYM--------QILSPDFVKRYPNKII----------NIHHSF--LPAFIGANPYQRAYER 208 (280)
T ss_pred HHHHHHHHHHhCCCEEEEeCch--------hhCCHHHHhhccCCEE----------EecCCc--CCCCCCcCHHHHHHHc
Confidence 3456777777777777777653 3356665443333211 125554 4445788999999999
Q ss_pred CCcEEecccc--CchhhhHHHHhhhhcceeEec-ccCHHHHHHHHHHHhcCchhHHHHHHHHHHH
Q 018483 267 GVPMLCKPFF--GDQNLNMRYVCDVWNVGLELE-EFEGGTIKKAIKRLMVDTEGKEMRKKAIHLK 328 (355)
Q Consensus 267 GvP~l~~P~~--~DQ~~na~~~~~~~g~g~~l~-~~~~~~l~~ai~~~l~~~~~~~~~~~a~~l~ 328 (355)
|+...++=.+ .+..+.+..+.+ .-+.+. .-|.++|.+.+.++= - .-|-+..+.+.
T Consensus 209 G~k~tG~TvH~V~e~lD~GpII~Q---~~v~I~~~dt~~~L~~ri~~~E-~---~~~~~ai~~~~ 266 (280)
T TIGR00655 209 GVKIIGATAHYVTEELDEGPIIEQ---DVVRVDHTDNVEDLIRAGRDIE-K---VVLARAVKLHL 266 (280)
T ss_pred CCCeEEEEEEEEcCCCcCCCeEEE---EEEEcCCCCCHHHHHHHHHHHH-H---HHHHHHHHHHH
Confidence 9999887654 344455555533 223333 678888888776632 2 35555554444
No 244
>COG1609 PurR Transcriptional regulators [Transcription]
Probab=21.92 E-value=5.2e+02 Score=23.83 Aligned_cols=93 Identities=11% Similarity=0.013 Sum_probs=47.1
Q ss_pred ccCcEEEEcCccccchHHHHHHHHhhCCCceecCcccccCCCc--CCCCCcccchhhHhhhccCCCceEEEeeccccccC
Q 018483 106 KKCSALIVNTVDFLEQEALTKVQELFSASAFTIGPFHKLVPTI--SGSLLKEDTNCISWLNKQAPKSVIYVSFGSIASID 183 (355)
Q Consensus 106 ~~~~~~l~nt~~~le~~~~~~~r~~~~~~v~~vGpl~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~ 183 (355)
.+.|++++.+ ...+.+....+.. .+.|++.++-........ .......-....++|-+++.+.+.|++.+......
T Consensus 113 ~~vdGiIi~~-~~~~~~~~~~l~~-~~~P~V~i~~~~~~~~~~~V~~Dn~~~~~~a~~~L~~~G~~~i~~i~~~~~~~~~ 190 (333)
T COG1609 113 KRVDGLILLG-ERPNDSLLELLAA-AGIPVVVIDRSPPGLGVPSVGIDNFAGAYLATEHLIELGHRRIAFIGGPLDSSAS 190 (333)
T ss_pred cCCCEEEEec-CCCCHHHHHHHHh-cCCCEEEEeCCCccCCCCEEEEChHHHHHHHHHHHHHCCCceEEEEeCCCccccH
Confidence 4567777766 2233334444444 256677777544321100 00000001123445555566777777766533334
Q ss_pred HHHHHHHHHHHHhCCCC
Q 018483 184 EKELLETAWGLANCEQP 200 (355)
Q Consensus 184 ~~~~~~~~~~l~~~~~~ 200 (355)
.+.++.+.+++.+.+..
T Consensus 191 ~~R~~Gf~~al~~~~~~ 207 (333)
T COG1609 191 RERLEGYRAALREAGLP 207 (333)
T ss_pred hHHHHHHHHHHHHCCCC
Confidence 56677777788776655
No 245
>PF08452 DNAP_B_exo_N: DNA polymerase family B exonuclease domain, N-terminal; InterPro: IPR013660 This domain is found in viral DNA polymerases to the N terminus of DNA polymerase family B exonuclease domains (IPR006133 from INTERPRO). ; GO: 0003887 DNA-directed DNA polymerase activity
Probab=21.91 E-value=48 Score=17.07 Aligned_cols=17 Identities=24% Similarity=0.968 Sum_probs=13.3
Q ss_pred hhhHhhhccCCCceEEE
Q 018483 158 NCISWLNKQAPKSVIYV 174 (355)
Q Consensus 158 ~~~~~l~~~~~~~~v~v 174 (355)
.|..|.+.+.++..+|.
T Consensus 4 kCiNWFE~~ge~r~lyL 20 (22)
T PF08452_consen 4 KCINWFESRGEERFLYL 20 (22)
T ss_pred EEeehhhhCCceeEEEE
Confidence 37889998888777775
No 246
>TIGR00730 conserved hypothetical protein, DprA/Smf-related, family 2. This model represents one branch of a subfamily of proteins of unknown function. Both PSI-BLAST and weak hits by this model show a low level of similarity to and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting that the branches may have distinct functions.
Probab=21.78 E-value=3.6e+02 Score=22.46 Aligned_cols=30 Identities=10% Similarity=-0.035 Sum_probs=20.4
Q ss_pred hcccCCceeeccCchhHHHHhh---------cCCcEEecc
Q 018483 244 ANDAVGGFWSHCGWNSTLESIC---------EGVPMLCKP 274 (355)
Q Consensus 244 ~~~~~~~~I~HgG~~s~~eal~---------~GvP~l~~P 274 (355)
..+++ .++-=||.||+-|.+. +.+|++++=
T Consensus 95 ~~sda-~I~lPGG~GTL~El~e~~~~~qlg~~~kPiil~n 133 (178)
T TIGR00730 95 ELADA-FIAMPGGFGTLEELFEVLTWAQLGIHQKPIILFN 133 (178)
T ss_pred HhCCE-EEEcCCCcchHHHHHHHHHHHHcCCCCCCEEEEC
Confidence 33444 3455588899988743 489998874
No 247
>PRK13337 putative lipid kinase; Reviewed
Probab=21.78 E-value=3.3e+02 Score=24.67 Aligned_cols=27 Identities=11% Similarity=-0.072 Sum_probs=22.1
Q ss_pred CceeeccCchhHHHHhhc------CCcEEeccc
Q 018483 249 GGFWSHCGWNSTLESICE------GVPMLCKPF 275 (355)
Q Consensus 249 ~~~I~HgG~~s~~eal~~------GvP~l~~P~ 275 (355)
+.+|.-||-||+.|++.. ..|+-++|.
T Consensus 59 d~vvv~GGDGTl~~vv~gl~~~~~~~~lgiiP~ 91 (304)
T PRK13337 59 DLVIAAGGDGTLNEVVNGIAEKENRPKLGIIPV 91 (304)
T ss_pred CEEEEEcCCCHHHHHHHHHhhCCCCCcEEEECC
Confidence 459999999999998862 357889997
No 248
>COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis]
Probab=21.72 E-value=4e+02 Score=25.36 Aligned_cols=69 Identities=10% Similarity=0.205 Sum_probs=46.8
Q ss_pred HhhhhcccCCceeeccCchhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcce-eEec--ccCHHHHHHHHHHHhcCc
Q 018483 240 KEVLANDAVGGFWSHCGWNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVG-LELE--EFEGGTIKKAIKRLMVDT 315 (355)
Q Consensus 240 ~~~L~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g-~~l~--~~~~~~l~~ai~~~l~~~ 315 (355)
..+++++++ +|. .=..|+.=|++.|+|.+.+-+ |+.+...+++ +|+- ..++ .++.+.+.+.+.+.+.+-
T Consensus 280 ~~~l~~~dl--~Vg-~R~HsaI~al~~g~p~i~i~Y---~~K~~~l~~~-~gl~~~~~~i~~~~~~~l~~~~~e~~~~~ 351 (385)
T COG2327 280 GGILAACDL--IVG-MRLHSAIMALAFGVPAIAIAY---DPKVRGLMQD-LGLPGFAIDIDPLDAEILSAVVLERLTKL 351 (385)
T ss_pred HHHhccCce--EEe-ehhHHHHHHHhcCCCeEEEee---cHHHHHHHHH-cCCCcccccCCCCchHHHHHHHHHHHhcc
Confidence 446667764 443 345788999999999999854 3344455555 6664 2233 888999988888777653
No 249
>PF10933 DUF2827: Protein of unknown function (DUF2827); InterPro: IPR021234 This is a family of uncharacterised proteins found in Burkholderia.
Probab=21.66 E-value=3.3e+02 Score=25.65 Aligned_cols=99 Identities=15% Similarity=0.199 Sum_probs=63.8
Q ss_pred eecCChHhhh-hcccCCceeecc---Cch-hHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEecccCHHHHHHHH
Q 018483 234 VEWAPQKEVL-ANDAVGGFWSHC---GWN-STLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFEGGTIKKAI 308 (355)
Q Consensus 234 ~~~~pq~~~L-~~~~~~~~I~Hg---G~~-s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~l~~ai 308 (355)
.+-.+--+.| .|.++ +|+|= |.| --+|+++-|-|+| .|+..+. ++|..-++.+..+=.+++
T Consensus 258 egR~~~p~fla~~tD~--VvSHqWeN~lNYlY~daLyggYPLV---------HNS~~l~---d~GYYY~~fD~~~G~r~L 323 (364)
T PF10933_consen 258 EGRFDFPDFLAQHTDA--VVSHQWENPLNYLYYDALYGGYPLV---------HNSPLLK---DVGYYYPDFDAFEGARQL 323 (364)
T ss_pred eeecChHHHHHhCCCE--EEeccccchhhHHHHHHHhcCCCcc---------cCcchhc---ccCcCCCCccHHHHHHHH
Confidence 3333433333 46666 99995 333 4579999999998 4777773 477777666655555555
Q ss_pred HHHhc--CchhHHHHHHHHHHHHHHhhhhhcCCChHHHHHHHHHHH
Q 018483 309 KRLMV--DTEGKEMRKKAIHLKEKVELPLKEGGSCYNSLNDLVKKI 352 (355)
Q Consensus 309 ~~~l~--~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~l 352 (355)
.+.+. |.+.+.|+++|+++=..+. -.+.++++...+.|
T Consensus 324 ~~A~~~HD~~~~~Y~~ra~~~l~~~~------p~n~~nv~~y~~~L 363 (364)
T PF10933_consen 324 LRAIREHDADLDAYRARARRLLDRLS------PENPANVRAYEARL 363 (364)
T ss_pred HHHHHHccccHHHHHHHHHHHHHhhC------CCCHHHHHHHHHhh
Confidence 55553 3447899999999887775 23455666655543
No 250
>COG1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains [Transcription]
Probab=21.59 E-value=1.1e+02 Score=24.81 Aligned_cols=56 Identities=11% Similarity=-0.013 Sum_probs=43.3
Q ss_pred cCchhHHHHhhcCCcEEeccccCchhhhHHHHhhhhcceeEec--ccCHHHHHHHHHHHh
Q 018483 255 CGWNSTLESICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELE--EFEGGTIKKAIKRLM 312 (355)
Q Consensus 255 gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~--~~~~~~l~~ai~~~l 312 (355)
|+-=|++|-+.---|+|+-.-..-+++|...+.. |+-.... .++.+.|..++..+-
T Consensus 35 ~~RFTTfE~~El~~~~VvKkdg~Re~F~r~Kl~~--gl~~A~~KRpVs~e~ie~~v~~ie 92 (156)
T COG1327 35 GERFTTFERAELRPLIVVKKDGRREPFDREKLRR--GLIRACEKRPVSSEQIEEAVSHIE 92 (156)
T ss_pred ccccchhheeeeccceEECcCCCcCCCCHHHHHH--HHHHHHhcCCCCHHHHHHHHHHHH
Confidence 4446888988888888888877778888888754 6666666 899999988887764
No 251
>PF09547 Spore_IV_A: Stage IV sporulation protein A (spore_IV_A); InterPro: IPR014201 This entry is designated stage IV sporulation protein A. It acts in the mother cell compartment and plays a role in spore coat morphogenesis []. A comparative genome analysis of all sequenced genomes of Firmicutes shows that the proteins are strictly conserved among the sub-set of endospore-forming species.
Probab=21.24 E-value=2.8e+02 Score=26.94 Aligned_cols=71 Identities=11% Similarity=0.147 Sum_probs=53.6
Q ss_pred hhhcccCCceeeccCch--------------hHHHHhhcCCcEEec-----cccCchhhhHHHHhhhhcceeEec---cc
Q 018483 242 VLANDAVGGFWSHCGWN--------------STLESICEGVPMLCK-----PFFGDQNLNMRYVCDVWNVGLELE---EF 299 (355)
Q Consensus 242 ~L~~~~~~~~I~HgG~~--------------s~~eal~~GvP~l~~-----P~~~DQ~~na~~~~~~~g~g~~l~---~~ 299 (355)
|-.|+-++++||-=|.= ++.|--.-|+|.+++ |...+-..=+..+++++++-+..- .+
T Consensus 141 I~dHSTIGiVVTTDGSi~dipRe~Y~eAEervI~ELk~igKPFvillNs~~P~s~et~~L~~eL~ekY~vpVlpvnc~~l 220 (492)
T PF09547_consen 141 ITDHSTIGIVVTTDGSITDIPRENYVEAEERVIEELKEIGKPFVILLNSTKPYSEETQELAEELEEKYDVPVLPVNCEQL 220 (492)
T ss_pred eccCCceeEEEecCCCccCCChHHHHHHHHHHHHHHHHhCCCEEEEEeCCCCCCHHHHHHHHHHHHHhCCcEEEeehHHc
Confidence 34688899999887742 677778889999986 444444445666777678866554 89
Q ss_pred CHHHHHHHHHHHh
Q 018483 300 EGGTIKKAIKRLM 312 (355)
Q Consensus 300 ~~~~l~~ai~~~l 312 (355)
+.+++...+.++|
T Consensus 221 ~~~DI~~Il~~vL 233 (492)
T PF09547_consen 221 REEDITRILEEVL 233 (492)
T ss_pred CHHHHHHHHHHHH
Confidence 9999999999987
No 252
>PRK04946 hypothetical protein; Provisional
Probab=21.23 E-value=59 Score=27.33 Aligned_cols=28 Identities=21% Similarity=0.151 Sum_probs=17.9
Q ss_pred ceeecCChH-hhhhcccCCceeeccCchhHH
Q 018483 232 CIVEWAPQK-EVLANDAVGGFWSHCGWNSTL 261 (355)
Q Consensus 232 ~~~~~~pq~-~~L~~~~~~~~I~HgG~~s~~ 261 (355)
.+..|+.|. .|++...+ =-.|||.|.++
T Consensus 141 ~V~~wL~q~~~V~af~~A--~~~~GG~GA~~ 169 (181)
T PRK04946 141 QTPLWLAQHPDVMAFHQA--PKEWGGDAALL 169 (181)
T ss_pred HHHHHHcCCchhheeecc--CcccCCceEEE
Confidence 356787763 35554444 56899998654
No 253
>COG3245 CycB Cytochrome c5 [Energy production and conversion]
Probab=21.09 E-value=72 Score=24.61 Aligned_cols=46 Identities=17% Similarity=0.256 Sum_probs=34.9
Q ss_pred hhcCCcEEeccccCchhhhHHHHhhhhcceeEec----------------ccCHHHHHHHHHHH
Q 018483 264 ICEGVPMLCKPFFGDQNLNMRYVCDVWNVGLELE----------------EFEGGTIKKAIKRL 311 (355)
Q Consensus 264 l~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~----------------~~~~~~l~~ai~~~ 311 (355)
+.|+.++.+.|..+|.-.|+-|+.+ |.-..++ +.+.|++..+|+-+
T Consensus 60 ~CHa~~~~GAPk~GdkAaW~PRiaq--G~dtL~~hai~GfnAMPpkG~ca~cSdDe~kAaId~M 121 (126)
T COG3245 60 ACHAAGLPGAPKTGDKAAWAPRIAQ--GKDTLLDHAINGFNAMPPKGGCADCSDDEVKAAIDFM 121 (126)
T ss_pred HhccCCCCCCCCCCchhhhhhHHHh--chHHHHHHHhccccCCCCCCCcCCCCHHHHHHHHHHH
Confidence 4567788999999999999999965 5543332 47888898888644
No 254
>PF02016 Peptidase_S66: LD-carboxypeptidase; InterPro: IPR003507 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This signature is found in the Escherichia coli microcin C7 self-immunity protein mccF and in muramoyltetrapeptide carboxypeptidase (3.4.17.13 from EC, LD-carboxypeptidase A). LD-carboxypeptidase A belongs to MEROPS peptidase family S66 (clan SS). The entry also contains uncharacterised proteins including hypothetical proteins from various bacteria archaea.; PDB: 1ZRS_A 1ZL0_B 2AUM_B 2AUN_B 3TLG_A 3TLC_A 3TLZ_B 3TLY_B 3TLE_A 3TLB_B ....
Probab=21.03 E-value=1.2e+02 Score=27.55 Aligned_cols=74 Identities=15% Similarity=0.241 Sum_probs=48.6
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEEcCCCcCCCCcccCCChhhhhhcCCCCceeecCChHhhhhcccCCceeeccCchhHH
Q 018483 182 IDEKELLETAWGLANCEQPFLWVVRPGLVRGSNCLELLPINFQDSVGERGCIVEWAPQKEVLANDAVGGFWSHCGWNSTL 261 (355)
Q Consensus 182 ~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~pq~~~L~~~~~~~~I~HgG~~s~~ 261 (355)
.+.+..+.+.+++....++.||.++++. ... ++.++++...+-.||+. ||=..-..+++
T Consensus 46 s~~~Ra~dL~~a~~d~~i~aI~~~rGGy-----------g~~--------rlL~~ld~~~i~~~pK~--~iGySDiTaL~ 104 (284)
T PF02016_consen 46 SDEERAEDLNEAFADPEIDAIWCARGGY-----------GAN--------RLLPYLDYDAIRKNPKI--FIGYSDITALH 104 (284)
T ss_dssp -HHHHHHHHHHHHHSTTEEEEEES--SS------------GG--------GGGGGCHHHHHHHSG-E--EEE-GGGHHHH
T ss_pred CHHHHHHHHHHHhcCCCCCEEEEeeccc-----------cHH--------HHHhcccccccccCCCE--EEEecchHHHH
Confidence 4567788899999999999999988753 111 45566666667777776 88777777777
Q ss_pred HHhhc--CCcEEecccc
Q 018483 262 ESICE--GVPMLCKPFF 276 (355)
Q Consensus 262 eal~~--GvP~l~~P~~ 276 (355)
-+++. |.+.+-=|+.
T Consensus 105 ~al~~~~g~~t~hGp~~ 121 (284)
T PF02016_consen 105 NALYAKTGLVTFHGPML 121 (284)
T ss_dssp HHHHHHHTBEEEES--H
T ss_pred HHHHHhCCCeEEEcchh
Confidence 77654 6777777764
No 255
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=20.74 E-value=6.1e+02 Score=22.60 Aligned_cols=26 Identities=15% Similarity=-0.002 Sum_probs=12.8
Q ss_pred eEEEeeccccccCHHHHHHHHHHHHhCC
Q 018483 171 VIYVSFGSIASIDEKELLETAWGLANCE 198 (355)
Q Consensus 171 ~v~vs~GS~~~~~~~~~~~~~~~l~~~~ 198 (355)
.|.++-|... ..+.+...++.+...|
T Consensus 134 PVilk~G~~~--t~~e~~~Ave~i~~~G 159 (260)
T TIGR01361 134 PVLLKRGMGN--TIEEWLYAAEYILSSG 159 (260)
T ss_pred cEEEeCCCCC--CHHHHHHHHHHHHHcC
Confidence 3455655443 2444555555555444
No 256
>cd03409 Chelatase_Class_II Class II Chelatase: a family of ATP-independent monomeric or homodimeric enzymes that catalyze the insertion of metal into protoporphyrin rings. This family includes protoporphyrin IX ferrochelatase (HemH), sirohydrochlorin ferrochelatase (SirB) and the cobaltochelatases, CbiK and CbiX. HemH and SirB are involved in heme and siroheme biosynthesis, respectively, while the cobaltochelatases are associated with cobalamin biosynthesis. Excluded from this family are the ATP-dependent heterotrimeric chelatases (class I) and the multifunctional homodimeric enzymes with dehydrogenase and chelatase activities (class III).
Probab=20.47 E-value=2.4e+02 Score=20.39 Aligned_cols=35 Identities=23% Similarity=0.282 Sum_probs=22.9
Q ss_pred eEEEeeccccc-cCHHHHHHHHHHHHhC--CCCEEEEE
Q 018483 171 VIYVSFGSIAS-IDEKELLETAWGLANC--EQPFLWVV 205 (355)
Q Consensus 171 ~v~vs~GS~~~-~~~~~~~~~~~~l~~~--~~~~i~~~ 205 (355)
+|+++.||... .....+..+.+.+.+. +..+.+.+
T Consensus 2 lllv~HGs~~~s~~~~~~~~~~~~l~~~~~~~~v~~a~ 39 (101)
T cd03409 2 LLVVGHGSPYKDPYKKDIEAQAHNLAESLPDFPYYVGF 39 (101)
T ss_pred EEEEECCCCCCccHHHHHHHHHHHHHHHCCCCCEEEEE
Confidence 68889999865 4456777777777653 24444443
No 257
>PF07905 PucR: Purine catabolism regulatory protein-like family; InterPro: IPR012914 This domain is found in the purine catabolism regulatory protein expressed by Bacillus subtilis (PucR, O32138 from SWISSPROT). PucR is thought to be a transcriptional regulator of genes involved in the purine degradation pathway, and may contain a LysR-like DNA-binding domain. It is similar to LysR-type regulators in that it represses its own expression []. The other members of this family are also putative regulatory proteins.
Probab=20.42 E-value=4e+02 Score=20.42 Aligned_cols=41 Identities=27% Similarity=0.203 Sum_probs=28.9
Q ss_pred hhHhhhccCCCceEEEeecccccc-CHHHHHHHHHHHHhCCCCEEE
Q 018483 159 CISWLNKQAPKSVIYVSFGSIASI-DEKELLETAWGLANCEQPFLW 203 (355)
Q Consensus 159 ~~~~l~~~~~~~~v~vs~GS~~~~-~~~~~~~~~~~l~~~~~~~i~ 203 (355)
..+|+.. +-++++.|-.... ..+.+..+++.|.+.+..-+.
T Consensus 36 ~~~~l~~----gElvlttg~~~~~~~~~~~~~~i~~L~~~~~agL~ 77 (123)
T PF07905_consen 36 PSDWLRG----GELVLTTGYALRDDDEEELREFIRELAEKGAAGLG 77 (123)
T ss_pred HHHhCCC----CeEEEECCcccCCCCHHHHHHHHHHHHHCCCeEEE
Confidence 5678764 2377777776665 566788999999988875443
No 258
>PRK02231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=20.38 E-value=1e+02 Score=27.76 Aligned_cols=50 Identities=10% Similarity=0.022 Sum_probs=33.5
Q ss_pred CceeeccCchhHHHHhh----cCCcEEeccccCchhhhHHHHhhhhcceeEecccCHHHHHHHHHHHhc
Q 018483 249 GGFWSHCGWNSTLESIC----EGVPMLCKPFFGDQNLNMRYVCDVWNVGLELEEFEGGTIKKAIKRLMV 313 (355)
Q Consensus 249 ~~~I~HgG~~s~~eal~----~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~l~~ai~~~l~ 313 (355)
+++|+=||-||++.|+. .++|++++-.. .+|... +++.+++.+.+.++++
T Consensus 44 d~vi~iGGDGT~L~aa~~~~~~~~PilgIn~G--------------~lGFL~-~~~~~~~~~~l~~~~~ 97 (272)
T PRK02231 44 QLAIVIGGDGNMLGRARVLAKYDIPLIGINRG--------------NLGFLT-DIDPKNAYEQLEACLE 97 (272)
T ss_pred CEEEEECCcHHHHHHHHHhccCCCcEEEEeCC--------------CCcccc-cCCHHHHHHHHHHHHh
Confidence 44999999999998755 37898887421 122211 4566677777777666
No 259
>cd00763 Bacterial_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to a subfamily of the PFKA family (cd00363) and include bacterial ATP-dependent phosphofructokinases. These are allosrterically regulated homotetramers; the subunits are of about 320 amino acids.
Probab=20.29 E-value=1.2e+02 Score=28.10 Aligned_cols=37 Identities=19% Similarity=0.174 Sum_probs=30.1
Q ss_pred hhhcccCCceeeccCchhHHHHhh---cCCcEEeccccCc
Q 018483 242 VLANDAVGGFWSHCGWNSTLESIC---EGVPMLCKPFFGD 278 (355)
Q Consensus 242 ~L~~~~~~~~I~HgG~~s~~eal~---~GvP~l~~P~~~D 278 (355)
.|..-+++.+|.=||-+|+.-|.. +|+|+|++|-.-|
T Consensus 87 ~l~~~~Id~Li~IGGdgs~~~a~~L~e~~i~vigiPkTID 126 (317)
T cd00763 87 QLKKHGIDALVVIGGDGSYMGAMRLTEHGFPCVGLPGTID 126 (317)
T ss_pred HHHHcCCCEEEEECCchHHHHHHHHHHcCCCEEEeccccc
Confidence 466778889999999998877744 5999999998644
No 260
>cd01141 TroA_d Periplasmic binding protein TroA_d. These proteins are predicted to function as initial receptors in the ABC metal ion uptake in eubacteria and archaea. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind their ligands in the cleft between these domains.
Probab=20.13 E-value=1.3e+02 Score=24.86 Aligned_cols=29 Identities=10% Similarity=0.149 Sum_probs=20.5
Q ss_pred CccEEEeCCccch--HHHHHHHcCCCeEEEe
Q 018483 10 RISCIVYDSTMCF--SQSVADHLKLPGICVR 38 (355)
Q Consensus 10 ~~D~vI~D~~~~~--~~~iA~~lgiP~i~~~ 38 (355)
+||+||......- ...--+..|||++.+.
T Consensus 69 ~PDlii~~~~~~~~~~~~~l~~~gIpvv~i~ 99 (186)
T cd01141 69 KPDLVILYGGFQAQTILDKLEQLGIPVLYVN 99 (186)
T ss_pred CCCEEEEecCCCchhHHHHHHHcCCCEEEeC
Confidence 8999998654322 3445678999988874
Done!