Query 018486
Match_columns 355
No_of_seqs 250 out of 544
Neff 6.7
Searched_HMMs 13730
Date Mon Mar 25 16:00:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018486.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/018486hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1wi6a1 d.58.7.1 (A:69-143) Ri 58.6 7.3 0.00053 26.4 5.0 51 151-208 3-53 (75)
2 d1fxla1 d.58.7.1 (A:37-118) Hu 50.8 4.9 0.00036 27.5 2.9 54 150-208 6-64 (82)
3 d1fxla2 d.58.7.1 (A:119-203) H 49.0 5.5 0.0004 27.7 2.9 52 150-208 10-68 (85)
4 d1b7fa2 d.58.7.1 (A:205-289) S 43.7 6.8 0.00049 27.1 2.7 52 150-208 10-68 (85)
5 d1b7fa1 d.58.7.1 (A:123-204) S 41.3 7.3 0.00053 26.6 2.5 52 150-208 6-64 (82)
6 d2cpfa1 d.58.7.1 (A:362-446) P 40.0 9 0.00066 26.3 2.9 23 150-172 2-24 (85)
7 d1rk8a_ d.58.7.1 (A:) RNA-bind 39.3 9.6 0.0007 26.5 2.9 23 150-172 11-33 (88)
8 d2cq3a1 d.58.7.1 (A:110-202) R 33.3 13 0.00096 26.0 2.9 23 150-172 15-37 (93)
9 d2cpha1 d.58.7.1 (A:454-547) P 31.7 13 0.00092 26.2 2.5 29 150-180 12-40 (94)
10 d1zh5a2 d.58.7.1 (A:105-189) L 31.2 14 0.001 25.5 2.7 49 151-206 11-65 (85)
11 d2u2fa_ d.58.7.1 (A:) Splicing 30.5 14 0.00099 25.5 2.5 29 150-180 5-33 (85)
12 d2cqda1 d.58.7.1 (A:1-103) RNA 29.7 15 0.0011 26.2 2.8 32 147-180 11-42 (103)
13 d1cvja1 d.58.7.1 (A:11-90) Pol 28.8 18 0.0013 24.4 2.9 28 151-180 5-32 (80)
14 d1h2vz_ d.58.7.1 (Z:) CBP20, 2 28.7 18 0.0013 25.3 2.9 52 150-208 11-69 (93)
15 d1rjuv_ g.46.1.1 (V:) Metallot 27.9 14 0.001 21.3 1.7 19 309-327 5-24 (36)
16 d1x0fa1 d.58.7.1 (A:183-257) N 27.6 14 0.001 25.0 2.1 24 150-173 3-26 (75)
17 d2c2la2 g.44.1.2 (A:225-304) S 27.1 19 0.0014 24.6 2.7 49 245-298 31-79 (80)
18 d1no8a_ d.58.7.1 (A:) Nuclear 27.0 17 0.0013 24.4 2.5 28 151-180 5-32 (78)
19 d1cvja2 d.58.7.1 (A:91-179) Po 26.5 20 0.0015 24.7 2.8 23 150-172 12-34 (89)
20 d2msta_ d.58.7.1 (A:) Neural R 26.1 12 0.00087 24.8 1.4 24 151-174 4-27 (75)
21 d2cqga1 d.58.7.1 (A:96-185) TA 25.9 21 0.0015 24.9 2.9 53 149-206 11-68 (90)
22 d1whwa_ d.58.7.1 (A:) Probable 25.7 18 0.0013 25.4 2.5 29 150-180 12-40 (99)
23 d1wg1a_ d.58.7.1 (A:) Probable 25.3 23 0.0017 24.4 3.0 57 150-213 9-65 (88)
24 d2ghpa1 d.58.7.1 (A:116-196) U 25.1 12 0.0009 25.3 1.3 24 150-173 5-28 (81)
25 d2cqia1 d.58.7.1 (A:1-90) Nucl 24.8 20 0.0014 24.8 2.5 53 149-208 11-68 (90)
26 d2cq0a1 d.58.7.1 (A:231-320) E 24.7 13 0.00096 25.8 1.5 29 150-180 12-40 (90)
27 d2f9da1 d.58.7.1 (A:12-125) Pr 24.6 22 0.0016 25.5 2.9 23 150-172 11-33 (114)
28 d1whxa_ d.58.7.1 (A:) Probable 24.6 20 0.0015 25.5 2.6 57 150-213 14-71 (111)
29 d1l3ka1 d.58.7.1 (A:8-91) Nucl 24.2 30 0.0022 23.5 3.4 53 150-207 10-67 (84)
30 d2b0ga1 d.58.7.1 (A:1-83) Spli 23.9 13 0.00096 25.4 1.3 24 150-173 12-35 (83)
31 d1wexa_ d.58.7.1 (A:) Heteroge 23.8 22 0.0016 25.3 2.7 29 151-181 20-48 (104)
32 d2cqca1 d.58.7.1 (A:109-191) A 22.1 28 0.002 23.5 2.8 29 150-180 13-41 (83)
33 d1wg4a_ d.58.7.1 (A:) Splicing 20.9 96 0.007 21.4 5.9 57 150-213 19-75 (98)
34 d1x5oa1 d.58.7.1 (A:8-108) RNA 20.5 23 0.0017 25.0 2.2 24 150-173 22-45 (101)
35 d1p1ta_ d.58.7.1 (A:) Cleavage 20.2 18 0.0013 25.7 1.4 50 151-207 13-69 (104)
No 1
>d1wi6a1 d.58.7.1 (A:69-143) Ribonucleoprotein PTB-binding 1, Raver-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=58.63 E-value=7.3 Score=26.44 Aligned_cols=51 Identities=14% Similarity=0.158 Sum_probs=34.2
Q ss_pred HhhCCCCCChHHHHHHHhccccEEEEEEEEccEEEEEEeecccCCCCHHHHHHHHHhh
Q 018486 151 RRAVPYSWDPPLLASFIENYGTHIVTSITIGGRDVVYIRQHQSSPLSMMDIENYVKDI 208 (355)
Q Consensus 151 ~~~LP~~yd~~~y~~fIe~YGTHyit~v~lGGk~v~~v~~~~ss~ls~~evk~cl~~~ 208 (355)
...||..++..+...+++.||...+....-.|--++.+ .+.++.++++...
T Consensus 3 V~nLp~~~t~~~l~~~F~~~g~~~~~~~~~~g~afv~f-------~~~~~A~~Ai~~l 53 (75)
T d1wi6a1 3 IRGLPGDVTNQEVHDLLSDYELKYCFVDKYKGTAFVTL-------LNGEQAEAAINTF 53 (75)
T ss_dssp EECCCTTCCHHHHHHHTTTSCEEEEEEETTTTEEEEEE-------SSHHHHHHHHHHH
T ss_pred EeCCCCcCCHHHHHHHHhcccccceeecccceeEEEEE-------CCHHHHHHHHHHh
Confidence 35699999999999999999966655555445422211 2456666666543
No 2
>d1fxla1 d.58.7.1 (A:37-118) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=50.84 E-value=4.9 Score=27.52 Aligned_cols=54 Identities=13% Similarity=0.178 Sum_probs=33.5
Q ss_pred HHhhCCCCCChHHHHHHHhccccEEEEEEEE---ccE-E-EEEEeecccCCCCHHHHHHHHHhh
Q 018486 150 IRRAVPYSWDPPLLASFIENYGTHIVTSITI---GGR-D-VVYIRQHQSSPLSMMDIENYVKDI 208 (355)
Q Consensus 150 F~~~LP~~yd~~~y~~fIe~YGTHyit~v~l---GGk-~-v~~v~~~~ss~ls~~evk~cl~~~ 208 (355)
|...||..++..++.++++.||.-.-..+.. .|+ . +-+|.- .+.++.+.|++..
T Consensus 6 ~V~nLp~~~te~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afv~f-----~~~~~a~~a~~~l 64 (82)
T d1fxla1 6 IVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNY-----IDPKDAEKAINTL 64 (82)
T ss_dssp EEESCCTTCCHHHHHHHHHTTSCEEEEEEEECTTTCCEEEEEEEEE-----SSHHHHHHHHHHH
T ss_pred EEECCCCCCCHHHHHHHHHHhCCcccccceeeccCCCceeeEEEEE-----CCHHHHHHHHHHh
Confidence 3457999999999999999999743322221 233 1 112111 2467777777654
No 3
>d1fxla2 d.58.7.1 (A:119-203) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=49.04 E-value=5.5 Score=27.71 Aligned_cols=52 Identities=21% Similarity=0.356 Sum_probs=33.6
Q ss_pred HHhhCCCCCChHHHHHHHhccccEEEEEEEE-----ccE--EEEEEeecccCCCCHHHHHHHHHhh
Q 018486 150 IRRAVPYSWDPPLLASFIENYGTHIVTSITI-----GGR--DVVYIRQHQSSPLSMMDIENYVKDI 208 (355)
Q Consensus 150 F~~~LP~~yd~~~y~~fIe~YGTHyit~v~l-----GGk--~v~~v~~~~ss~ls~~evk~cl~~~ 208 (355)
|...||..++..++.++++.||+ |.++.+ .|+ -.-+|.- .+.++.+++++..
T Consensus 10 fV~nLp~~~te~~L~~~F~~~G~--v~~v~i~~d~~~g~~kg~afV~f-----~~~~~a~~Ai~~l 68 (85)
T d1fxla2 10 YVSGLPKTMTQKELEQLFSQYGR--IITSRILVDQVTGVSRGVGFIRF-----DKRIEAEEAIKGL 68 (85)
T ss_dssp EEESCCTTCCHHHHHHHHGGGSC--EEEEEEEECTTTCCEEEEEEEEE-----SSHHHHHHHHHHH
T ss_pred EEeCCCCCCCHHHHHHHHHHhCC--ccccccccccccccCCCeeEEEE-----cCHHHHHHHHHHh
Confidence 34579999999999999999998 444443 344 1222221 2466777777643
No 4
>d1b7fa2 d.58.7.1 (A:205-289) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=43.73 E-value=6.8 Score=27.12 Aligned_cols=52 Identities=17% Similarity=0.362 Sum_probs=33.9
Q ss_pred HHhhCCCCCChHHHHHHHhccccEEEEEEEE-----ccE--EEEEEeecccCCCCHHHHHHHHHhh
Q 018486 150 IRRAVPYSWDPPLLASFIENYGTHIVTSITI-----GGR--DVVYIRQHQSSPLSMMDIENYVKDI 208 (355)
Q Consensus 150 F~~~LP~~yd~~~y~~fIe~YGTHyit~v~l-----GGk--~v~~v~~~~ss~ls~~evk~cl~~~ 208 (355)
|...||..++..++.++++.||+ |.++.+ .|+ -+-+|.- .+.++.+++++..
T Consensus 10 fV~nlp~~~te~~l~~~F~~~G~--i~~~~~~~d~~~g~~~g~afV~f-----~~~~~A~~Ai~~l 68 (85)
T d1b7fa2 10 YVTNLPRTITDDQLDTIFGKYGS--IVQKNILRDKLTGRPRGVAFVRY-----NKREEAQEAISAL 68 (85)
T ss_dssp EEESCCTTCCHHHHHHHHTSSSC--EEEEEEEECTTTCCEEEEEEEEE-----SSHHHHHHHHHHH
T ss_pred EEeCCCCCCCHHHHHHHHHhhCC--EeeeeeecccccccCceeEEEEE-----CCHHHHHHHHHHH
Confidence 44579999999999999999997 444443 233 1222211 2466777777654
No 5
>d1b7fa1 d.58.7.1 (A:123-204) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=41.26 E-value=7.3 Score=26.60 Aligned_cols=52 Identities=19% Similarity=0.277 Sum_probs=33.9
Q ss_pred HHhhCCCCCChHHHHHHHhccccEEEEEEEE-----ccE--EEEEEeecccCCCCHHHHHHHHHhh
Q 018486 150 IRRAVPYSWDPPLLASFIENYGTHIVTSITI-----GGR--DVVYIRQHQSSPLSMMDIENYVKDI 208 (355)
Q Consensus 150 F~~~LP~~yd~~~y~~fIe~YGTHyit~v~l-----GGk--~v~~v~~~~ss~ls~~evk~cl~~~ 208 (355)
|...||..++..++.++++.||. |.++.+ .|+ -+-+|.- .+.++.+++++..
T Consensus 6 ~V~nLp~~~t~~~l~~~F~~~G~--v~~~~i~~~~~~g~~~g~afV~f-----~~~~~A~~ai~~l 64 (82)
T d1b7fa1 6 IVNYLPQDMTDRELYALFRAIGP--INTCRIMRDYKTGYSYGYAFVDF-----TSEMDSQRAIKVL 64 (82)
T ss_dssp EEECCCTTCCHHHHHHHHHTTSC--EEEEECCEETTTTEECSEEEEEE-----SSHHHHHHHHHHH
T ss_pred EEeCCCCCCCHHHHHHHHHHhCC--cceeeeeeecccCCccccceEEE-----CCHHHHHHHHHHh
Confidence 34579999999999999999997 555554 232 1111111 2567777777653
No 6
>d2cpfa1 d.58.7.1 (A:362-446) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=40.01 E-value=9 Score=26.31 Aligned_cols=23 Identities=13% Similarity=0.228 Sum_probs=20.2
Q ss_pred HHhhCCCCCChHHHHHHHhcccc
Q 018486 150 IRRAVPYSWDPPLLASFIENYGT 172 (355)
Q Consensus 150 F~~~LP~~yd~~~y~~fIe~YGT 172 (355)
|...||...+..+..++++.||+
T Consensus 2 fV~nLp~~~t~~~l~~~F~~~G~ 24 (85)
T d2cpfa1 2 FIKNLNFSTTEETLKGVFSKVGA 24 (85)
T ss_dssp EEESCCTTCCHHHHHHHHHTTSC
T ss_pred EEcCCCCCCCHHHHHHHHHHhCC
Confidence 34569999999999999999997
No 7
>d1rk8a_ d.58.7.1 (A:) RNA-binding protein 8 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=39.31 E-value=9.6 Score=26.54 Aligned_cols=23 Identities=9% Similarity=0.099 Sum_probs=20.4
Q ss_pred HHhhCCCCCChHHHHHHHhcccc
Q 018486 150 IRRAVPYSWDPPLLASFIENYGT 172 (355)
Q Consensus 150 F~~~LP~~yd~~~y~~fIe~YGT 172 (355)
|...||..++..++.+++..||+
T Consensus 11 ~V~nL~~~~t~~~l~~~F~~~G~ 33 (88)
T d1rk8a_ 11 FVTSIHEEAQEDEIQEKFCDYGE 33 (88)
T ss_dssp EEESCCTTCCHHHHHHHHGGGSC
T ss_pred EEeCCCCCCCHHHHHHHHHHcCC
Confidence 44579999999999999999997
No 8
>d2cq3a1 d.58.7.1 (A:110-202) RNA-binding protein 9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.27 E-value=13 Score=26.04 Aligned_cols=23 Identities=17% Similarity=0.508 Sum_probs=20.7
Q ss_pred HHhhCCCCCChHHHHHHHhcccc
Q 018486 150 IRRAVPYSWDPPLLASFIENYGT 172 (355)
Q Consensus 150 F~~~LP~~yd~~~y~~fIe~YGT 172 (355)
|...||..++..++.+++..||+
T Consensus 15 ~v~nLp~~~t~~~L~~~F~~~G~ 37 (93)
T d2cq3a1 15 HVSNIPFRFRDPDLRQMFGQFGK 37 (93)
T ss_dssp EEESCCTTCCHHHHHHHGGGTSC
T ss_pred EEECCCCCCCHHHHHHHHhhcce
Confidence 45679999999999999999997
No 9
>d2cpha1 d.58.7.1 (A:454-547) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=31.69 E-value=13 Score=26.25 Aligned_cols=29 Identities=10% Similarity=0.492 Sum_probs=24.0
Q ss_pred HHhhCCCCCChHHHHHHHhccccEEEEEEEE
Q 018486 150 IRRAVPYSWDPPLLASFIENYGTHIVTSITI 180 (355)
Q Consensus 150 F~~~LP~~yd~~~y~~fIe~YGTHyit~v~l 180 (355)
|...||..++..++..++..||+ |+++.|
T Consensus 12 ~V~nLp~~~~e~~l~~~F~~~G~--i~~v~i 40 (94)
T d2cpha1 12 LVRNIPFQANQREIRELFSTFGE--LKTVRL 40 (94)
T ss_dssp EEESCCTTCCHHHHHHHHHTTSC--EEEEEC
T ss_pred EEeCCCCCCCHHHHHHHHHHhCC--ceEEEE
Confidence 55679999999999999999996 556554
No 10
>d1zh5a2 d.58.7.1 (A:105-189) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.24 E-value=14 Score=25.49 Aligned_cols=49 Identities=14% Similarity=0.264 Sum_probs=32.3
Q ss_pred HhhCCCCCChHHHHHHHhccccEEEEEEEEc----cE--EEEEEeecccCCCCHHHHHHHHH
Q 018486 151 RRAVPYSWDPPLLASFIENYGTHIVTSITIG----GR--DVVYIRQHQSSPLSMMDIENYVK 206 (355)
Q Consensus 151 ~~~LP~~yd~~~y~~fIe~YGTHyit~v~lG----Gk--~v~~v~~~~ss~ls~~evk~cl~ 206 (355)
...||...+..++.++++.||. +.++.|- |+ -+-+|.- -++++.+++++
T Consensus 11 V~nlp~~~te~~l~~~F~~~G~--v~~v~l~~~~~~~~kG~afV~f-----~~~e~a~~al~ 65 (85)
T d1zh5a2 11 IKGFPTDATLDDIKEWLEDKGQ--VLNIQMRRTLHKAFKGSIFVVF-----DSIESAKKFVE 65 (85)
T ss_dssp EECCCTTCCHHHHHHHHTTSCC--EEEEEEEECTTCCEEEEEEEEE-----SCHHHHHHHHT
T ss_pred EECCCCCCCHHHHHHHHHHhcc--cccceeeeeccCCcceEEEEEE-----cCHHHHHHHHH
Confidence 3469999999999999999997 4555552 11 1222211 24677777775
No 11
>d2u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.50 E-value=14 Score=25.51 Aligned_cols=29 Identities=7% Similarity=0.335 Sum_probs=23.6
Q ss_pred HHhhCCCCCChHHHHHHHhccccEEEEEEEE
Q 018486 150 IRRAVPYSWDPPLLASFIENYGTHIVTSITI 180 (355)
Q Consensus 150 F~~~LP~~yd~~~y~~fIe~YGTHyit~v~l 180 (355)
|...||..++..++.+++..||. |.++.+
T Consensus 5 fV~nlp~~~te~~l~~~F~~~G~--v~~v~i 33 (85)
T d2u2fa_ 5 FIGGLPNYLNDDQVKELLTSFGP--LKAFNL 33 (85)
T ss_dssp EEETCCSSCCSHHHHHHHTSSSC--EEEEEE
T ss_pred EEECCCCCCCHHHHHHHHHhcCc--cceEEe
Confidence 44579999999999999999998 455554
No 12
>d2cqda1 d.58.7.1 (A:1-103) RNA-binding region containing protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.71 E-value=15 Score=26.20 Aligned_cols=32 Identities=16% Similarity=0.403 Sum_probs=25.4
Q ss_pred chHHHhhCCCCCChHHHHHHHhccccEEEEEEEE
Q 018486 147 REEIRRAVPYSWDPPLLASFIENYGTHIVTSITI 180 (355)
Q Consensus 147 ~~~F~~~LP~~yd~~~y~~fIe~YGTHyit~v~l 180 (355)
+.=|...||..++..++.++++.||. |.++.+
T Consensus 11 ~~lfV~nLp~~~te~~l~~~F~~~G~--i~~v~i 42 (103)
T d2cqda1 11 TKIFVGGLPYHTTDASLRKYFEGFGD--IEEAVV 42 (103)
T ss_dssp SEEEEECCCSSCCHHHHHHHHHTTSC--EEEEEE
T ss_pred cEEEEeCCCCcCcHHHHHHHHhhccc--ccceec
Confidence 33456689999999999999999996 555555
No 13
>d1cvja1 d.58.7.1 (A:11-90) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.78 E-value=18 Score=24.35 Aligned_cols=28 Identities=14% Similarity=0.112 Sum_probs=22.9
Q ss_pred HhhCCCCCChHHHHHHHhccccEEEEEEEE
Q 018486 151 RRAVPYSWDPPLLASFIENYGTHIVTSITI 180 (355)
Q Consensus 151 ~~~LP~~yd~~~y~~fIe~YGTHyit~v~l 180 (355)
...||..++..++.++++.||. |.++.+
T Consensus 5 V~nL~~~~te~~l~~~F~~~G~--i~~v~i 32 (80)
T d1cvja1 5 VGDLHPDVTEAMLYEKFSPAGP--ILSIRV 32 (80)
T ss_dssp EESCCTTCCHHHHHHHHGGGSC--EEEEEE
T ss_pred EeCCCCcCCHHHHHHHHHHhCC--EeEEEE
Confidence 3468999999999999999996 555555
No 14
>d1h2vz_ d.58.7.1 (Z:) CBP20, 20KDa nuclear cap-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.67 E-value=18 Score=25.29 Aligned_cols=52 Identities=13% Similarity=0.193 Sum_probs=33.8
Q ss_pred HHhhCCCCCChHHHHHHHhccccEEEEEEEE-----ccE-E-EEEEeecccCCCCHHHHHHHHHhh
Q 018486 150 IRRAVPYSWDPPLLASFIENYGTHIVTSITI-----GGR-D-VVYIRQHQSSPLSMMDIENYVKDI 208 (355)
Q Consensus 150 F~~~LP~~yd~~~y~~fIe~YGTHyit~v~l-----GGk-~-v~~v~~~~ss~ls~~evk~cl~~~ 208 (355)
|...||...+..++.++++.||. |.++.+ .|+ . +-+|.- -+.++.+.++...
T Consensus 11 fV~nlp~~~te~~l~~~F~~~G~--i~~v~i~~~~~~~~~kg~afV~f-----~~~~~A~~Ai~~l 69 (93)
T d1h2vz_ 11 YVGNLSFYTTEEQIYELFSKSGD--IKKIIMGLDKMKKTACGFCFVEY-----YSRADAENAMRYI 69 (93)
T ss_dssp EEESCCTTCCHHHHHHHHGGGSC--EEEEEEEECTTTCCEEEEEEEEE-----SSHHHHHHHHHHT
T ss_pred EEeCCCCCCCHHHHHHHHHHHCC--cceeccccccccccccceEEEEE-----CCHHHHHHHHHHh
Confidence 34569999999999999999996 555555 233 1 222211 2466777777643
No 15
>d1rjuv_ g.46.1.1 (V:) Metallothionein {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=27.92 E-value=14 Score=21.29 Aligned_cols=19 Identities=16% Similarity=0.146 Sum_probs=13.7
Q ss_pred cccccCCCCC-ccCCCCCCc
Q 018486 309 RVWAPQHSNI-QRKEPVCSS 327 (355)
Q Consensus 309 ~~wap~~n~~-~~~~~~~~~ 327 (355)
|+|..|.||. -.|.++||.
T Consensus 5 cqcgscknneqcqkscscpt 24 (36)
T d1rjuv_ 5 CQCGSCKNNEQCQKSCSCPT 24 (36)
T ss_dssp CCSTTTTTCGGGTTSCCSCT
T ss_pred cccCCccChHHHhhcCCCCC
Confidence 6778898888 346677774
No 16
>d1x0fa1 d.58.7.1 (A:183-257) Nuclear ribonucleoprotein D0 (AUF1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.64 E-value=14 Score=24.96 Aligned_cols=24 Identities=4% Similarity=0.120 Sum_probs=20.3
Q ss_pred HHhhCCCCCChHHHHHHHhccccE
Q 018486 150 IRRAVPYSWDPPLLASFIENYGTH 173 (355)
Q Consensus 150 F~~~LP~~yd~~~y~~fIe~YGTH 173 (355)
|...||...+..++.++++.||.-
T Consensus 3 fVgnLp~~~te~~l~~~F~~~G~I 26 (75)
T d1x0fa1 3 FVGGLSPDTPEEKIREYFGGFGEV 26 (75)
T ss_dssp EEESCCSSCCHHHHHHHHHHHSCE
T ss_pred EEcCCCCCCCHHHHHHHHHHhCCc
Confidence 345689999999999999999973
No 17
>d2c2la2 g.44.1.2 (A:225-304) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=27.15 E-value=19 Score=24.55 Aligned_cols=49 Identities=10% Similarity=0.121 Sum_probs=30.2
Q ss_pred hhhHHHHHHhhccCCceeeeeeeehhhhccCchhHHHHHHHHHHHHHhCCChhH
Q 018486 245 EQSHAKWAETVQLAPDVINMTFTPIVSLLEGVPGIKHLARAIELYLEYKPPIED 298 (355)
Q Consensus 245 ~~~~~~W~~SV~~~P~vI~~~l~PI~eLl~~~p~k~~Lk~AI~~Yl~~kp~iee 298 (355)
.....+|+.+-... .++--+-+...+|+++ ..|+++|++|++.+|-++|
T Consensus 31 ~~ci~~~l~~~~~~-cP~c~~~l~~~~l~pN----~~L~~~I~~~l~~~~~~~d 79 (80)
T d2c2la2 31 RKDIEEHLQRVGHF-NPVTRSPLTQEQLIPN----LAMKEVIDAFISENGWVED 79 (80)
T ss_dssp TTHHHHHHHHTCSS-CTTTCCCCCGGGCEEC----HHHHHHHHHHHTTCSCSSC
T ss_pred HHHHHHHHhcCCcc-CCCccccccccccccH----HHHHHHHHHHHHHCCCcCC
Confidence 34577898764432 2332222334455554 5899999999997776554
No 18
>d1no8a_ d.58.7.1 (A:) Nuclear factor Aly {Mouse (Mus musculus) [TaxId: 10090]}
Probab=27.03 E-value=17 Score=24.43 Aligned_cols=28 Identities=7% Similarity=0.280 Sum_probs=22.7
Q ss_pred HhhCCCCCChHHHHHHHhccccEEEEEEEE
Q 018486 151 RRAVPYSWDPPLLASFIENYGTHIVTSITI 180 (355)
Q Consensus 151 ~~~LP~~yd~~~y~~fIe~YGTHyit~v~l 180 (355)
...||...+..+..+++..||. |.++.+
T Consensus 5 V~nLp~~~~~~~l~~~F~~~G~--v~~~~i 32 (78)
T d1no8a_ 5 VSNLDFGVSDADIQELFAEFGT--LKKAAV 32 (78)
T ss_dssp EESCCTTCCHHHHHHHHHHHSC--EEEEEE
T ss_pred EECCCCCCCHHHHHHHHHHhCC--CeEEEE
Confidence 4579999999999999999996 455554
No 19
>d1cvja2 d.58.7.1 (A:91-179) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.46 E-value=20 Score=24.71 Aligned_cols=23 Identities=17% Similarity=0.228 Sum_probs=20.6
Q ss_pred HHhhCCCCCChHHHHHHHhcccc
Q 018486 150 IRRAVPYSWDPPLLASFIENYGT 172 (355)
Q Consensus 150 F~~~LP~~yd~~~y~~fIe~YGT 172 (355)
|...||...+..++.+++..||+
T Consensus 12 ~V~nLp~~~t~~~l~~~F~~~G~ 34 (89)
T d1cvja2 12 FIKNLDKSIDNKALYDTFSAFGN 34 (89)
T ss_dssp EEESCCSSCCHHHHHHHHHTTSC
T ss_pred EEeCCCCCCCHHHHHHHHHhcCC
Confidence 45679999999999999999997
No 20
>d2msta_ d.58.7.1 (A:) Neural RNA-binding protein Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=26.07 E-value=12 Score=24.79 Aligned_cols=24 Identities=8% Similarity=0.104 Sum_probs=20.4
Q ss_pred HhhCCCCCChHHHHHHHhccccEE
Q 018486 151 RRAVPYSWDPPLLASFIENYGTHI 174 (355)
Q Consensus 151 ~~~LP~~yd~~~y~~fIe~YGTHy 174 (355)
...||...+..++.++++.||+-.
T Consensus 4 V~nLp~~~te~~l~~~F~~~G~i~ 27 (75)
T d2msta_ 4 VGGLSVNTTVEDVKHYFEQFGKVD 27 (75)
T ss_dssp EECCCSSCCHHHHHHHHHTTSCCS
T ss_pred EeCCCCCCCHHHHHHHHHHhCCcc
Confidence 346899999999999999999843
No 21
>d2cqga1 d.58.7.1 (A:96-185) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.91 E-value=21 Score=24.86 Aligned_cols=53 Identities=11% Similarity=0.238 Sum_probs=33.6
Q ss_pred HHHhhCCCCCChHHHHHHHhccccEEEEEEEEc---cE--EEEEEeecccCCCCHHHHHHHHH
Q 018486 149 EIRRAVPYSWDPPLLASFIENYGTHIVTSITIG---GR--DVVYIRQHQSSPLSMMDIENYVK 206 (355)
Q Consensus 149 ~F~~~LP~~yd~~~y~~fIe~YGTHyit~v~lG---Gk--~v~~v~~~~ss~ls~~evk~cl~ 206 (355)
=|...||...+..++.++++.||.-.-..+..- |+ -+-+|.- -+.++.+++++
T Consensus 11 lfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~srG~aFV~f-----~~~~~a~~al~ 68 (90)
T d2cqga1 11 LIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRF-----TEYETQVKVMS 68 (90)
T ss_dssp EEEESCCSSCCHHHHHHHHGGGSCEEEEEEEECSSSCSEEEEEEEEE-----SSHHHHHHHHH
T ss_pred EEEECCCCCCCHHHHHHHHHhhcccceeeeccCCCCcccCCEEEEEE-----CCHHHHHHHHh
Confidence 356679999999999999999997443333321 33 2222221 24567777775
No 22
>d1whwa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=25.65 E-value=18 Score=25.45 Aligned_cols=29 Identities=17% Similarity=0.391 Sum_probs=23.1
Q ss_pred HHhhCCCCCChHHHHHHHhccccEEEEEEEE
Q 018486 150 IRRAVPYSWDPPLLASFIENYGTHIVTSITI 180 (355)
Q Consensus 150 F~~~LP~~yd~~~y~~fIe~YGTHyit~v~l 180 (355)
|...||...+..++.++++.||+ |.++.+
T Consensus 12 fV~nL~~~~t~~~l~~~F~~~g~--v~~v~i 40 (99)
T d1whwa_ 12 FVRNLSYTSSEEDLEKLFSAYGP--LSELHY 40 (99)
T ss_dssp EEECCCTTCCHHHHHHHHHTTSC--EEEEEC
T ss_pred EEECCCCcCCHHHHHHHHHhcCC--ceeeee
Confidence 44579999999999999999998 344444
No 23
>d1wg1a_ d.58.7.1 (A:) Probable RNA-binding protein KIAA1579 {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.34 E-value=23 Score=24.38 Aligned_cols=57 Identities=9% Similarity=0.145 Sum_probs=33.8
Q ss_pred HHhhCCCCCChHHHHHHHhccccEEEEEEEEccEEEEEEeecccCCCCHHHHHHHHHhhccccc
Q 018486 150 IRRAVPYSWDPPLLASFIENYGTHIVTSITIGGRDVVYIRQHQSSPLSMMDIENYVKDIGDERF 213 (355)
Q Consensus 150 F~~~LP~~yd~~~y~~fIe~YGTHyit~v~lGGk~v~~v~~~~ss~ls~~evk~cl~~~~~~~f 213 (355)
|...||..++..++.++++.||.-++.-....|-- +| .=.+.++.++++...-...+
T Consensus 9 ~V~nLp~~~t~~~l~~lF~~~G~~~~~~~~~kg~a--fV-----~f~~~~~A~~Ai~~ln~~~~ 65 (88)
T d1wg1a_ 9 LVKNLPQDSNCQEVHDLLKDYDLKYCYVDRNKRTA--FV-----TLLNGEQAQNAIQMFHQYSF 65 (88)
T ss_dssp EEESCCSSCCHHHHHHHTCSSCCCCEEEEGGGTEE--EE-----CCSCHHHHHHHHHHHTTEEE
T ss_pred EEeCCCCccChHHHHHHHHhcCceeeeeeccCCce--EE-----EECCHHHHHHHHHHhCCCEE
Confidence 34579999999999999999994322222222221 11 12346677777765444434
No 24
>d2ghpa1 d.58.7.1 (A:116-196) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=25.06 E-value=12 Score=25.27 Aligned_cols=24 Identities=8% Similarity=0.167 Sum_probs=20.8
Q ss_pred HHhhCCCCCChHHHHHHHhccccE
Q 018486 150 IRRAVPYSWDPPLLASFIENYGTH 173 (355)
Q Consensus 150 F~~~LP~~yd~~~y~~fIe~YGTH 173 (355)
|...||..++..+..++++.||+-
T Consensus 5 ~v~nLp~~~t~~~l~~~f~~~G~v 28 (81)
T d2ghpa1 5 WMTNFPPSYTQRNIRDLLQDINVV 28 (81)
T ss_dssp EEECCCTTCCHHHHHHHHHHTTCC
T ss_pred EEECCCCcCCHHHHHHHHHHhCcE
Confidence 345799999999999999999974
No 25
>d2cqia1 d.58.7.1 (A:1-90) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.83 E-value=20 Score=24.81 Aligned_cols=53 Identities=8% Similarity=0.100 Sum_probs=33.9
Q ss_pred HHHhhCCCCCChHHHHHHHhccccEEEEEEEE-----ccEEEEEEeecccCCCCHHHHHHHHHhh
Q 018486 149 EIRRAVPYSWDPPLLASFIENYGTHIVTSITI-----GGRDVVYIRQHQSSPLSMMDIENYVKDI 208 (355)
Q Consensus 149 ~F~~~LP~~yd~~~y~~fIe~YGTHyit~v~l-----GGk~v~~v~~~~ss~ls~~evk~cl~~~ 208 (355)
=|...||...+..++.++++.||. |.++.+ +++-+-+|.- .+.++.+.+++..
T Consensus 11 l~V~nLp~~~te~~l~~~F~~~G~--i~~v~i~~d~~~~~~~afV~f-----~~~~~A~~A~~~l 68 (90)
T d2cqia1 11 LYVGNLSRDVTEVLILQLFSQIGP--CKSCKMITEHTSNDPYCFVEF-----YEHRDAAAALAAM 68 (90)
T ss_dssp EEEESCCTTCCHHHHHHHHHHHSC--EEEEEEECCCCSSCCEEEEEE-----SSHHHHHHHHHHH
T ss_pred EEEECCCCCCCHHHHHHHHHhcCC--ceeeeeecccCccceeeEEEE-----CCHHHHHHHHHHc
Confidence 355679999999999999999997 344444 2332212111 1456777777654
No 26
>d2cq0a1 d.58.7.1 (A:231-320) Eukaryotic translation initiation factor 3 subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.74 E-value=13 Score=25.80 Aligned_cols=29 Identities=10% Similarity=0.185 Sum_probs=23.3
Q ss_pred HHhhCCCCCChHHHHHHHhccccEEEEEEEE
Q 018486 150 IRRAVPYSWDPPLLASFIENYGTHIVTSITI 180 (355)
Q Consensus 150 F~~~LP~~yd~~~y~~fIe~YGTHyit~v~l 180 (355)
|...||...+...+.++++.||+ |.++.+
T Consensus 12 ~V~nLp~~~t~~~l~~~f~~~G~--v~~v~i 40 (90)
T d2cq0a1 12 RVTNLSEDTRETDLQELFRPFGS--ISRIYL 40 (90)
T ss_dssp EEESCCTTCCHHHHHTTSTTTCC--EEEEEE
T ss_pred EEECCCCCCCHHHHHHHHHHhcc--cccccc
Confidence 44579999999999999999997 455544
No 27
>d2f9da1 d.58.7.1 (A:12-125) Pre-mRNA branch site protein p14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.62 E-value=22 Score=25.53 Aligned_cols=23 Identities=22% Similarity=0.456 Sum_probs=20.3
Q ss_pred HHhhCCCCCChHHHHHHHhcccc
Q 018486 150 IRRAVPYSWDPPLLASFIENYGT 172 (355)
Q Consensus 150 F~~~LP~~yd~~~y~~fIe~YGT 172 (355)
|...||...+..++.+++..||+
T Consensus 11 ~V~nLp~~~te~~l~~~F~~~G~ 33 (114)
T d2f9da1 11 YIRNLPYKITAEEMYDIFGKYGP 33 (114)
T ss_dssp EEESCCTTCCHHHHHHHHHTTSC
T ss_pred EEECCCCCCCHHHHHHHHhhcCC
Confidence 34579999999999999999998
No 28
>d1whxa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=24.58 E-value=20 Score=25.49 Aligned_cols=57 Identities=7% Similarity=0.207 Sum_probs=36.0
Q ss_pred HHhhCCCCCChHHHHHHHhccccEEEEEEEEccE-EEEEEeecccCCCCHHHHHHHHHhhccccc
Q 018486 150 IRRAVPYSWDPPLLASFIENYGTHIVTSITIGGR-DVVYIRQHQSSPLSMMDIENYVKDIGDERF 213 (355)
Q Consensus 150 F~~~LP~~yd~~~y~~fIe~YGTHyit~v~lGGk-~v~~v~~~~ss~ls~~evk~cl~~~~~~~f 213 (355)
|.+.||...+..++..++..||. |+.+.|+-. -.-+|.- .+.++.++++...-...|
T Consensus 14 ~V~nLp~~~t~~~L~~~F~~fG~--I~~v~l~~~kg~afV~f-----~~~~~A~~A~~~lng~~~ 71 (111)
T d1whxa_ 14 LAKNLPAGTLAAEIQETFSRFGS--LGRVLLPEGGITAIVEF-----LEPLEARKAFRHLAYSKF 71 (111)
T ss_dssp EEESCCTTCCHHHHHHHHHTTSC--EEEEECCSSSSCEEEEE-----SCHHHHHHHHHHHTTCBS
T ss_pred EEECCCCCCCHHHHHhhhhccCC--ccEEEeeccCceEEEEE-----cCHHHHHHHHHHHcCCcc
Confidence 44679988899999999999996 667777533 1111111 235566677665333333
No 29
>d1l3ka1 d.58.7.1 (A:8-91) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.16 E-value=30 Score=23.53 Aligned_cols=53 Identities=11% Similarity=0.189 Sum_probs=34.4
Q ss_pred HHhhCCCCCChHHHHHHHhccccEEEEEEEE---ccE--EEEEEeecccCCCCHHHHHHHHHh
Q 018486 150 IRRAVPYSWDPPLLASFIENYGTHIVTSITI---GGR--DVVYIRQHQSSPLSMMDIENYVKD 207 (355)
Q Consensus 150 F~~~LP~~yd~~~y~~fIe~YGTHyit~v~l---GGk--~v~~v~~~~ss~ls~~evk~cl~~ 207 (355)
|...||...+..++.++++.||+-.-..+.. .|+ -+-+|.- .+.++.++++..
T Consensus 10 fV~nlp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~afV~f-----~~~~~a~~ai~~ 67 (84)
T d1l3ka1 10 FIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTY-----ATVEEVDAAMNA 67 (84)
T ss_dssp EEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEE-----SSHHHHHHHHHT
T ss_pred EEECCCCCCCHHHHHHHHHhhccccceeecccccCCCcccEEEEEE-----cCHHHHHHHHHh
Confidence 4457999999999999999999775544433 233 2323221 245667777653
No 30
>d2b0ga1 d.58.7.1 (A:1-83) Splicesomal U1A protein {Drosophila melanogaster [TaxId: 7227]}
Probab=23.91 E-value=13 Score=25.38 Aligned_cols=24 Identities=8% Similarity=0.202 Sum_probs=21.2
Q ss_pred HHhhCCCCCChHHHHHHHhccccE
Q 018486 150 IRRAVPYSWDPPLLASFIENYGTH 173 (355)
Q Consensus 150 F~~~LP~~yd~~~y~~fIe~YGTH 173 (355)
|...||..++..++..++..||+=
T Consensus 12 ~V~nLp~~~t~~~l~~~f~~~G~i 35 (83)
T d2b0ga1 12 FLTNLPEETNEMMLSMLFNQFPGF 35 (83)
T ss_dssp EEESCCTTCCHHHHHHHHTTSTTE
T ss_pred EEECCCCCCCHHHHHhhhccCccE
Confidence 456899999999999999999973
No 31
>d1wexa_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein L-like {Mouse (Mus musculus) [TaxId: 10090]}
Probab=23.83 E-value=22 Score=25.32 Aligned_cols=29 Identities=21% Similarity=0.201 Sum_probs=23.7
Q ss_pred HhhCCCCCChHHHHHHHhccccEEEEEEEEc
Q 018486 151 RRAVPYSWDPPLLASFIENYGTHIVTSITIG 181 (355)
Q Consensus 151 ~~~LP~~yd~~~y~~fIe~YGTHyit~v~lG 181 (355)
.+.||...+..++.++++.||. |+.+.+.
T Consensus 20 v~nlp~~~te~~l~~~F~~fG~--I~~~~~~ 48 (104)
T d1wexa_ 20 VRGLCESVVEADLVEALEKFGT--ICYVMMM 48 (104)
T ss_dssp EESCCSSCCHHHHHHHHTTTSC--EEEEEEE
T ss_pred EeCCCCCCCHHHHHHhhhhccc--ceEEEEE
Confidence 4579999999999999999996 5566653
No 32
>d2cqca1 d.58.7.1 (A:109-191) Arginine/serine-rich splicing factor 10 {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.11 E-value=28 Score=23.46 Aligned_cols=29 Identities=14% Similarity=0.177 Sum_probs=22.9
Q ss_pred HHhhCCCCCChHHHHHHHhccccEEEEEEEE
Q 018486 150 IRRAVPYSWDPPLLASFIENYGTHIVTSITI 180 (355)
Q Consensus 150 F~~~LP~~yd~~~y~~fIe~YGTHyit~v~l 180 (355)
|...||...+..++.++++.||. |.++.+
T Consensus 13 ~V~nL~~~~te~~l~~~F~~~G~--i~~v~i 41 (83)
T d2cqca1 13 GVFGLSLYTTERDLREVFSKYGP--IADVSI 41 (83)
T ss_dssp EEESCCSSCCHHHHHHHHHTTSC--EEEEEE
T ss_pred EEeCCCCCCCHHHHHHHHHHhCC--Cccccc
Confidence 34579999999999999999997 444444
No 33
>d1wg4a_ d.58.7.1 (A:) Splicing factor, arginine/serine-rich 9 (SFRS9) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=20.90 E-value=96 Score=21.39 Aligned_cols=57 Identities=19% Similarity=0.256 Sum_probs=35.9
Q ss_pred HHhhCCCCCChHHHHHHHhccccEEEEEEEEccEEEEEEeecccCCCCHHHHHHHHHhhccccc
Q 018486 150 IRRAVPYSWDPPLLASFIENYGTHIVTSITIGGRDVVYIRQHQSSPLSMMDIENYVKDIGDERF 213 (355)
Q Consensus 150 F~~~LP~~yd~~~y~~fIe~YGTHyit~v~lGGk~v~~v~~~~ss~ls~~evk~cl~~~~~~~f 213 (355)
|...||...+..++.+++..||+=.-..+.--|.-++.+ .+.++.+++++..-...|
T Consensus 19 ~V~Nlp~~~~~~~L~~~F~~~G~v~~~~i~~~g~afV~f-------~~~~~a~~Ai~~lng~~~ 75 (98)
T d1wg4a_ 19 LVSGLPPSGSWQDLKDHMREAGDVCYADVQKDGMGMVEY-------LRKEDMEYALRKLDDTKF 75 (98)
T ss_dssp EEECCCSSCCHHHHHHHHTTSSCEEEEEEETTTEEEEEE-------SSHHHHHHHHHHHSSEEE
T ss_pred EEECCCCCCCHHHHHHHHHhhcccccccccccceEEEEE-------CCHHHHHHHHHHhCCCEe
Confidence 345799999999999999999984444443333322111 246778888765333333
No 34
>d1x5oa1 d.58.7.1 (A:8-108) RNA-binding motif, single-stranded-interacting protein 1, RBMS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.46 E-value=23 Score=25.00 Aligned_cols=24 Identities=21% Similarity=0.383 Sum_probs=21.2
Q ss_pred HHhhCCCCCChHHHHHHHhccccE
Q 018486 150 IRRAVPYSWDPPLLASFIENYGTH 173 (355)
Q Consensus 150 F~~~LP~~yd~~~y~~fIe~YGTH 173 (355)
|...||..++..++.+++..||.-
T Consensus 22 fV~nLp~~~te~~L~~~F~~~G~i 45 (101)
T d1x5oa1 22 YISNLPLSMDEQELENMLKPFGQV 45 (101)
T ss_dssp EEESCCTTCCHHHHHHTTTTTSCE
T ss_pred EEeCCCCCCCHHHHHHHHhhcccc
Confidence 456799999999999999999974
No 35
>d1p1ta_ d.58.7.1 (A:) Cleavage stimulation factor, 64 kda subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.18 E-value=18 Score=25.71 Aligned_cols=50 Identities=14% Similarity=0.237 Sum_probs=32.2
Q ss_pred HhhCCCCCChHHHHHHHhccccEEEEEEEE-----ccE--EEEEEeecccCCCCHHHHHHHHHh
Q 018486 151 RRAVPYSWDPPLLASFIENYGTHIVTSITI-----GGR--DVVYIRQHQSSPLSMMDIENYVKD 207 (355)
Q Consensus 151 ~~~LP~~yd~~~y~~fIe~YGTHyit~v~l-----GGk--~v~~v~~~~ss~ls~~evk~cl~~ 207 (355)
...||...+..++.+++..||+ |.++.+ -|+ -+-+|.- -+.++.++++..
T Consensus 13 V~nLp~~~te~~l~~~f~~~G~--i~~v~i~~~~~tg~~~g~afV~f-----~~~~~a~~ai~~ 69 (104)
T d1p1ta_ 13 VGNIPYEATEEQLKDIFSEVGP--VVSFRLVYDRETGKPKGYGFCEY-----QDQETALSAMRN 69 (104)
T ss_dssp EESCCTTSCHHHHHHHHHTTSC--CSEEEEEEETTTTEEEEEEEEEC-----SCHHHHHHHHHH
T ss_pred EECCCCcCCHHHHHHhhhcccc--ccccccccccceeccCCceEEEE-----CCHHHHHHHHHH
Confidence 3479999999999999999997 344444 133 1222211 246677777764
Done!