BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018489
(355 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 180 bits (456), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 112/293 (38%), Positives = 164/293 (55%), Gaps = 28/293 (9%)
Query: 44 DWEIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALR-SAFT 102
D +I L IK I G+FGTVHR + G DVAVK+L E + A R + F
Sbjct: 31 DMDIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKIL--------MEQDFHAERVNEFL 82
Query: 103 QEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLI 162
+EVA+ +L HPN+ F+GA V P N+ +V EYL G+L L
Sbjct: 83 REVAIMKRLRHPNIVLFMGA---------------VTQPPNLS-IVTEYLSRGSLYRLLH 126
Query: 163 KN-RRRKLAFKVVVQLALDLARGLSYLHSQK--IVHRDVKTENMLLDKNRTVKIADFGVA 219
K+ R +L + + +A D+A+G++YLH++ IVHRD+K+ N+L+DK TVK+ DFG++
Sbjct: 127 KSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLS 186
Query: 220 RVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSE 279
R++AS GT +MAPEVL P N K DVYSFG+ LWE+ P+ +L+ ++
Sbjct: 187 RLKASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQ 246
Query: 280 VTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTS 332
V +AV + R EIPR +A +++ CW P KRP ++ +L + S
Sbjct: 247 VVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS 299
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 111/293 (37%), Positives = 164/293 (55%), Gaps = 28/293 (9%)
Query: 44 DWEIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALR-SAFT 102
D +I L IK I G+FGTVHR + G DVAVK+L E + A R + F
Sbjct: 31 DMDIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKIL--------MEQDFHAERVNEFL 82
Query: 103 QEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLI 162
+EVA+ +L HPN+ F+GA V P N+ +V EYL G+L L
Sbjct: 83 REVAIMKRLRHPNIVLFMGA---------------VTQPPNLS-IVTEYLSRGSLYRLLH 126
Query: 163 KN-RRRKLAFKVVVQLALDLARGLSYLHSQK--IVHRDVKTENMLLDKNRTVKIADFGVA 219
K+ R +L + + +A D+A+G++YLH++ IVHR++K+ N+L+DK TVK+ DFG++
Sbjct: 127 KSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLS 186
Query: 220 RVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSE 279
R++AS GT +MAPEVL P N K DVYSFG+ LWE+ P+ +L+ ++
Sbjct: 187 RLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQ 246
Query: 280 VTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTS 332
V +AV + R EIPR +A +++ CW P KRP ++ +L + S
Sbjct: 247 VVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS 299
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 151 bits (381), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 152/295 (51%), Gaps = 35/295 (11%)
Query: 44 DWEIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQ 103
DWEI ++ + I G+FGTV++G + G DVAVK+L+ A AF
Sbjct: 6 DWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLN-------VTAPTPQQLQAFKN 57
Query: 104 EVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIK 163
EV V K H N+ F+G + +V ++ G +L +L
Sbjct: 58 EVGVLRKTRHVNILLFMGYSTKPQ-----------------LAIVTQWCEGSSLYHHL-H 99
Query: 164 NRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEA 223
K K ++ +A ARG+ YLH++ I+HRD+K+ N+ L ++ TVKI DFG+A V++
Sbjct: 100 ASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKS 159
Query: 224 --SNPNDMTGETGTLGYMAPEVL---NGNPYNRKCDVYSFGICLWEIYCCDMPYPDL-SF 277
S + +G++ +MAPEV+ + NPY+ + DVY+FGI L+E+ +PY ++ +
Sbjct: 160 RWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 219
Query: 278 SEVTSAVVRQNLRPEIPRC---CPSSLANVMKRCWDANPDKRPEMDEVVSMLEAI 329
++ V R +L P++ + CP + +M C D+RP +++ +E +
Sbjct: 220 DQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEEL 274
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 152/295 (51%), Gaps = 35/295 (11%)
Query: 44 DWEIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQ 103
DWEI ++ + I G+FGTV++G + G DVAVK+L+ A AF
Sbjct: 18 DWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLN-------VTAPTPQQLQAFKN 69
Query: 104 EVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIK 163
EV V K H N+ F+G + +V ++ G +L +L
Sbjct: 70 EVGVLRKTRHVNILLFMGYSTAPQ-----------------LAIVTQWCEGSSLYHHLHA 112
Query: 164 NRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEA 223
+ K K ++ +A ARG+ YLH++ I+HRD+K+ N+ L ++ TVKI DFG+A ++
Sbjct: 113 SET-KFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKS 171
Query: 224 --SNPNDMTGETGTLGYMAPEVL---NGNPYNRKCDVYSFGICLWEIYCCDMPYPDL-SF 277
S + +G++ +MAPEV+ + NPY+ + DVY+FGI L+E+ +PY ++ +
Sbjct: 172 RWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 231
Query: 278 SEVTSAVVRQNLRPEIPRC---CPSSLANVMKRCWDANPDKRPEMDEVVSMLEAI 329
++ V R +L P++ + CP + +M C D+RP +++ +E +
Sbjct: 232 DQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEEL 286
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 149 bits (376), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 152/295 (51%), Gaps = 35/295 (11%)
Query: 44 DWEIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQ 103
DWEI ++ + I G+FGTV++G + G DVAVK+L+ A AF
Sbjct: 18 DWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLN-------VTAPTPQQLQAFKN 69
Query: 104 EVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIK 163
EV V K H N+ F+G + +V ++ G +L +L
Sbjct: 70 EVGVLRKTRHVNILLFMGYSTKPQ-----------------LAIVTQWCEGSSLYHHLHA 112
Query: 164 NRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEA 223
+ K K ++ +A ARG+ YLH++ I+HRD+K+ N+ L ++ TVKI DFG+A ++
Sbjct: 113 SET-KFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKS 171
Query: 224 --SNPNDMTGETGTLGYMAPEVL---NGNPYNRKCDVYSFGICLWEIYCCDMPYPDL-SF 277
S + +G++ +MAPEV+ + NPY+ + DVY+FGI L+E+ +PY ++ +
Sbjct: 172 RWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 231
Query: 278 SEVTSAVVRQNLRPEIPRC---CPSSLANVMKRCWDANPDKRPEMDEVVSMLEAI 329
++ V R +L P++ + CP + +M C D+RP +++ +E +
Sbjct: 232 DQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEEL 286
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 144 bits (364), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 145/295 (49%), Gaps = 37/295 (12%)
Query: 46 EIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEV 105
EI+ ++L ++ +I G FG V+R + G +VAVK H + +I+ QE
Sbjct: 3 EIDFAELTLEEIIGIGGFGKVYRAFWIGDEVAVK-----AARHDPDEDISQTIENVRQEA 57
Query: 106 AVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNR 165
++ L HPN+ G + L C+V+E+ GG L L
Sbjct: 58 KLFAMLKHPNIIALRGVCLKEPNL----------------CLVMEFARGGPLNRVL---S 98
Query: 166 RRKLAFKVVVQLALDLARGLSYLHSQKIV---HRDVKTENMLLDK--------NRTVKIA 214
+++ ++V A+ +ARG++YLH + IV HRD+K+ N+L+ + N+ +KI
Sbjct: 99 GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKIT 158
Query: 215 DFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPD 274
DFG+AR E M+ G +MAPEV+ + +++ DV+S+G+ LWE+ ++P+
Sbjct: 159 DFGLAR-EWHRTTKMSA-AGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRG 216
Query: 275 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAI 329
+ V V L IP CP A +M+ CW+ +P RP ++ L I
Sbjct: 217 IDGLAVAYGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 144 bits (363), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 153/298 (51%), Gaps = 35/298 (11%)
Query: 44 DWEIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQ 103
DWEI ++ + I G+FGTV++G + G DVAVK+L+ A AF
Sbjct: 2 DWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLN-------VTAPTPQQLQAFKN 53
Query: 104 EVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIK 163
EV V K H N+ F+G + +V ++ G +L +L
Sbjct: 54 EVGVLRKTRHVNILLFMGYSTAPQ-----------------LAIVTQWCEGSSLYHHL-H 95
Query: 164 NRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEA 223
K ++ +A A+G+ YLH++ I+HRD+K+ N+ L ++ TVKI DFG+A V++
Sbjct: 96 IIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKS 155
Query: 224 --SNPNDMTGETGTLGYMAPEVL---NGNPYNRKCDVYSFGICLWEIYCCDMPYPDL-SF 277
S + +G++ +MAPEV+ + NPY+ + DVY+FGI L+E+ +PY ++ +
Sbjct: 156 RWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 215
Query: 278 SEVTSAVVRQNLRPEIPRC---CPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTS 332
++ V R L P++ + CP ++ +M C D+RP ++++ +E + S
Sbjct: 216 DQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS 273
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 144 bits (363), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 153/298 (51%), Gaps = 35/298 (11%)
Query: 44 DWEIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQ 103
DWEI ++ + I G+FGTV++G + G DVAVK+L+ A AF
Sbjct: 30 DWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLN-------VTAPTPQQLQAFKN 81
Query: 104 EVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIK 163
EV V K H N+ F+G + +V ++ G +L +L
Sbjct: 82 EVGVLRKTRHVNILLFMGYSTKPQ-----------------LAIVTQWCEGSSLYHHL-H 123
Query: 164 NRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEA 223
K ++ +A A+G+ YLH++ I+HRD+K+ N+ L ++ TVKI DFG+A V++
Sbjct: 124 IIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKS 183
Query: 224 --SNPNDMTGETGTLGYMAPEVL---NGNPYNRKCDVYSFGICLWEIYCCDMPYPDL-SF 277
S + +G++ +MAPEV+ + NPY+ + DVY+FGI L+E+ +PY ++ +
Sbjct: 184 RWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 243
Query: 278 SEVTSAVVRQNLRPEIPRC---CPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTS 332
++ V R L P++ + CP ++ +M C D+RP ++++ +E + S
Sbjct: 244 DQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS 301
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 153/298 (51%), Gaps = 35/298 (11%)
Query: 44 DWEIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQ 103
DWEI ++ + I G+FGTV++G + G DVAVK+L+ A AF
Sbjct: 4 DWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLN-------VTAPTPQQLQAFKN 55
Query: 104 EVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIK 163
EV V K H N+ F+G + +V ++ G +L +L
Sbjct: 56 EVGVLRKTRHVNILLFMGYSTKPQ-----------------LAIVTQWCEGSSLYHHL-H 97
Query: 164 NRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEA 223
K ++ +A A+G+ YLH++ I+HRD+K+ N+ L ++ TVKI DFG+A V++
Sbjct: 98 IIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKS 157
Query: 224 --SNPNDMTGETGTLGYMAPEVL---NGNPYNRKCDVYSFGICLWEIYCCDMPYPDL-SF 277
S + +G++ +MAPEV+ + NPY+ + DVY+FGI L+E+ +PY ++ +
Sbjct: 158 RWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 217
Query: 278 SEVTSAVVRQNLRPEIPRC---CPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTS 332
++ V R L P++ + CP ++ +M C D+RP ++++ +E + S
Sbjct: 218 DQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS 275
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 153/298 (51%), Gaps = 35/298 (11%)
Query: 44 DWEIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQ 103
DWEI ++ + I G+FGTV++G + G DVAVK+L+ A AF
Sbjct: 7 DWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLN-------VTAPTPQQLQAFKN 58
Query: 104 EVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIK 163
EV V K H N+ F+G + +V ++ G +L +L
Sbjct: 59 EVGVLRKTRHVNILLFMGYSTKPQ-----------------LAIVTQWCEGSSLYHHL-H 100
Query: 164 NRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEA 223
K ++ +A A+G+ YLH++ I+HRD+K+ N+ L ++ TVKI DFG+A V++
Sbjct: 101 IIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKS 160
Query: 224 --SNPNDMTGETGTLGYMAPEVL---NGNPYNRKCDVYSFGICLWEIYCCDMPYPDL-SF 277
S + +G++ +MAPEV+ + NPY+ + DVY+FGI L+E+ +PY ++ +
Sbjct: 161 RWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 220
Query: 278 SEVTSAVVRQNLRPEIPRC---CPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTS 332
++ V R L P++ + CP ++ +M C D+RP ++++ +E + S
Sbjct: 221 DQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS 278
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 153/298 (51%), Gaps = 35/298 (11%)
Query: 44 DWEIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQ 103
DWEI ++ + I G+FGTV++G + G DVAVK+L+ A AF
Sbjct: 29 DWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLN-------VTAPTPQQLQAFKN 80
Query: 104 EVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIK 163
EV V K H N+ F+G + +V ++ G +L +L
Sbjct: 81 EVGVLRKTRHVNILLFMGYSTKPQ-----------------LAIVTQWCEGSSLYHHL-H 122
Query: 164 NRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEA 223
K ++ +A A+G+ YLH++ I+HRD+K+ N+ L ++ TVKI DFG+A V++
Sbjct: 123 IIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKS 182
Query: 224 --SNPNDMTGETGTLGYMAPEVL---NGNPYNRKCDVYSFGICLWEIYCCDMPYPDL-SF 277
S + +G++ +MAPEV+ + NPY+ + DVY+FGI L+E+ +PY ++ +
Sbjct: 183 RWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 242
Query: 278 SEVTSAVVRQNLRPEIPRC---CPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTS 332
++ V R L P++ + CP ++ +M C D+RP ++++ +E + S
Sbjct: 243 DQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS 300
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 153/298 (51%), Gaps = 35/298 (11%)
Query: 44 DWEIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQ 103
DWEI ++ + I G+FGTV++G + G DVAVK+L+ A AF
Sbjct: 7 DWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLN-------VTAPTPQQLQAFKN 58
Query: 104 EVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIK 163
EV V K H N+ F+G + +V ++ G +L +L
Sbjct: 59 EVGVLRKTRHVNILLFMGYSTKPQ-----------------LAIVTQWCEGSSLYHHL-H 100
Query: 164 NRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEA 223
K ++ +A A+G+ YLH++ I+HRD+K+ N+ L ++ TVKI DFG+A V++
Sbjct: 101 IIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKS 160
Query: 224 --SNPNDMTGETGTLGYMAPEVL---NGNPYNRKCDVYSFGICLWEIYCCDMPYPDL-SF 277
S + +G++ +MAPEV+ + NPY+ + DVY+FGI L+E+ +PY ++ +
Sbjct: 161 RWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 220
Query: 278 SEVTSAVVRQNLRPEIPRC---CPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTS 332
++ V R L P++ + CP ++ +M C D+RP ++++ +E + S
Sbjct: 221 DQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS 278
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 153/298 (51%), Gaps = 35/298 (11%)
Query: 44 DWEIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQ 103
DWEI ++ + I G+FGTV++G + G DVAVK+L+ A AF
Sbjct: 2 DWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLN-------VTAPTPQQLQAFKN 53
Query: 104 EVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIK 163
EV V K H N+ F+G + +V ++ G +L +L
Sbjct: 54 EVGVLRKTRHVNILLFMGYSTKPQ-----------------LAIVTQWCEGSSLYHHL-H 95
Query: 164 NRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEA 223
K ++ +A A+G+ YLH++ I+HRD+K+ N+ L ++ TVKI DFG+A V++
Sbjct: 96 IIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKS 155
Query: 224 --SNPNDMTGETGTLGYMAPEVL---NGNPYNRKCDVYSFGICLWEIYCCDMPYPDL-SF 277
S + +G++ +MAPEV+ + NPY+ + DVY+FGI L+E+ +PY ++ +
Sbjct: 156 RWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 215
Query: 278 SEVTSAVVRQNLRPEIPRC---CPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTS 332
++ V R L P++ + CP ++ +M C D+RP ++++ +E + S
Sbjct: 216 DQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS 273
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 145/294 (49%), Gaps = 41/294 (13%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQE 104
WE+E + + +K + G +G V+ G++ + + V + E+ E F +E
Sbjct: 8 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--------FLKE 59
Query: 105 VAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKN 164
AV ++ HPN+ + +G +I ++E++ G L YL +
Sbjct: 60 AAVMKEIKHPNLVQLLGVCTREPPFYI----------------IIEFMTYGNLLDYLREC 103
Query: 165 RRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEAS 224
R++++ V++ +A ++ + YL + +HRD+ N L+ +N VK+ADFG++R+
Sbjct: 104 NRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL--- 160
Query: 225 NPNDMTGETGT--------LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDM-PYPDL 275
MTG+T T + + APE L N ++ K DV++FG+ LWEI M PYP +
Sbjct: 161 ----MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 216
Query: 276 SFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAI 329
S+V ++ ++ R E P CP + +M+ CW NP RP E+ E +
Sbjct: 217 DLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 145/294 (49%), Gaps = 41/294 (13%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQE 104
WE+E + + +K + G +G V+ G++ + + V + E+ E F +E
Sbjct: 8 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--------FLKE 59
Query: 105 VAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKN 164
AV ++ HPN+ + +G +I ++E++ G L YL +
Sbjct: 60 AAVMKEIKHPNLVQLLGVCTREPPFYI----------------IIEFMTYGNLLDYLREC 103
Query: 165 RRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEAS 224
R++++ V++ +A ++ + YL + +HRD+ N L+ +N VK+ADFG++R+
Sbjct: 104 NRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL--- 160
Query: 225 NPNDMTGETGT--------LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDM-PYPDL 275
MTG+T T + + APE L N ++ K DV++FG+ LWEI M PYP +
Sbjct: 161 ----MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 216
Query: 276 SFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAI 329
S+V ++ ++ R E P CP + +M+ CW NP RP E+ E +
Sbjct: 217 DLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 144/294 (48%), Gaps = 41/294 (13%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQE 104
WE+E + + +K + G +G V+ G++ + + V + E+ E F +E
Sbjct: 9 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--------FLKE 60
Query: 105 VAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKN 164
AV ++ HPN+ + +G +I ++E++ G L YL +
Sbjct: 61 AAVMKEIKHPNLVQLLGVCTREPPFYI----------------IIEFMTYGNLLDYLREC 104
Query: 165 RRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEAS 224
R+++ V++ +A ++ + YL + +HRD+ N L+ +N VK+ADFG++R+
Sbjct: 105 NRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL--- 161
Query: 225 NPNDMTGETGT--------LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDM-PYPDL 275
MTG+T T + + APE L N ++ K DV++FG+ LWEI M PYP +
Sbjct: 162 ----MTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 217
Query: 276 SFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAI 329
S+V ++ ++ R E P CP + +M+ CW NP RP E+ E +
Sbjct: 218 DLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 270
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 144/294 (48%), Gaps = 41/294 (13%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQE 104
WE+E + + +K + G +G V+ G++ + + V + E+ E F +E
Sbjct: 13 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--------FLKE 64
Query: 105 VAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKN 164
AV ++ HPN+ + +G +I + E++ G L YL +
Sbjct: 65 AAVMKEIKHPNLVQLLGVCTREPPFYI----------------ITEFMTYGNLLDYLREC 108
Query: 165 RRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEAS 224
R++++ V++ +A ++ + YL + +HRD+ N L+ +N VK+ADFG++R+
Sbjct: 109 NRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL--- 165
Query: 225 NPNDMTGETGT--------LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDM-PYPDL 275
MTG+T T + + APE L N ++ K DV++FG+ LWEI M PYP +
Sbjct: 166 ----MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 221
Query: 276 SFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAI 329
S+V ++ ++ R E P CP + +M+ CW NP RP E+ E +
Sbjct: 222 DLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 144/294 (48%), Gaps = 41/294 (13%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQE 104
WE+E + + +K + G FG V+ G++ + + V + E+ E F +E
Sbjct: 6 WEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--------FLKE 57
Query: 105 VAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKN 164
AV ++ HPN+ + +G +I + E++ G L YL +
Sbjct: 58 AAVMKEIKHPNLVQLLGVCTREPPFYI----------------ITEFMTYGNLLDYLREC 101
Query: 165 RRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEAS 224
R++++ V++ +A ++ + YL + +HRD+ N L+ +N VK+ADFG++R+
Sbjct: 102 NRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL--- 158
Query: 225 NPNDMTGETGT--------LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDM-PYPDL 275
MTG+T T + + APE L N ++ K DV++FG+ LWEI M PYP +
Sbjct: 159 ----MTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 214
Query: 276 SFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAI 329
S+V ++ ++ R E P CP + +M+ CW NP RP E+ E +
Sbjct: 215 DPSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 144/294 (48%), Gaps = 41/294 (13%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQE 104
WE+E + + +K + G +G V+ G++ + + V + E+ E F +E
Sbjct: 8 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--------FLKE 59
Query: 105 VAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKN 164
AV ++ HPN+ + +G +I + E++ G L YL +
Sbjct: 60 AAVMKEIKHPNLVQLLGVCTREPPFYI----------------ITEFMTYGNLLDYLREC 103
Query: 165 RRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEAS 224
R++++ V++ +A ++ + YL + +HRD+ N L+ +N VK+ADFG++R+
Sbjct: 104 NRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL--- 160
Query: 225 NPNDMTGETGT--------LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDM-PYPDL 275
MTG+T T + + APE L N ++ K DV++FG+ LWEI M PYP +
Sbjct: 161 ----MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 216
Query: 276 SFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAI 329
S+V ++ ++ R E P CP + +M+ CW NP RP E+ E +
Sbjct: 217 DLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 144/294 (48%), Gaps = 41/294 (13%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQE 104
WE+E + + +K + G +G V+ G++ + + V + E+ E F +E
Sbjct: 8 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--------FLKE 59
Query: 105 VAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKN 164
AV ++ HPN+ + +G +I + E++ G L YL +
Sbjct: 60 AAVMKEIKHPNLVQLLGVCTREPPFYI----------------ITEFMTYGNLLDYLREC 103
Query: 165 RRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEAS 224
R++++ V++ +A ++ + YL + +HRD+ N L+ +N VK+ADFG++R+
Sbjct: 104 NRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL--- 160
Query: 225 NPNDMTGETGT--------LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDM-PYPDL 275
MTG+T T + + APE L N ++ K DV++FG+ LWEI M PYP +
Sbjct: 161 ----MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 216
Query: 276 SFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAI 329
S+V ++ ++ R E P CP + +M+ CW NP RP E+ E +
Sbjct: 217 DLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 142 bits (357), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 157/297 (52%), Gaps = 35/297 (11%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQE 104
WEIE S++++ + I G+FGTV++G + G DVAVK+L + AF E
Sbjct: 31 WEIEASEVMLSTRIGSGSFGTVYKGKWHG-DVAVKIL-------KVVDPTPEQFQAFRNE 82
Query: 105 VAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKN 164
VAV K H N+ F+G M + +V ++ G +L +L
Sbjct: 83 VAVLRKTRHVNILLFMGY-----------------MTKDNLAIVTQWCEGSSLYKHLHVQ 125
Query: 165 RRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEA- 223
+ F+++ +A A+G+ YLH++ I+HRD+K+ N+ L + TVKI DFG+A V++
Sbjct: 126 ETKFQMFQLI-DIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSR 184
Query: 224 -SNPNDMTGETGTLGYMAPEVL---NGNPYNRKCDVYSFGICLWEIYCCDMPYPDL-SFS 278
S + TG++ +MAPEV+ + NP++ + DVYS+GI L+E+ ++PY + +
Sbjct: 185 WSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD 244
Query: 279 EVTSAVVRQNLRPEIPRC---CPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTS 332
++ V R P++ + CP ++ ++ C ++RP +++S +E + S
Sbjct: 245 QIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHS 301
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 142 bits (357), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 144/294 (48%), Gaps = 41/294 (13%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQE 104
WE+E + + +K + G +G V+ G++ + + V + E+ E F +E
Sbjct: 13 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--------FLKE 64
Query: 105 VAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKN 164
AV ++ HPN+ + +G +I ++E++ G L YL +
Sbjct: 65 AAVMKEIKHPNLVQLLGVCTREPPFYI----------------IIEFMTYGNLLDYLREC 108
Query: 165 RRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEAS 224
R+++ V++ +A ++ + YL + +HRD+ N L+ +N VK+ADFG++R+
Sbjct: 109 NRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL--- 165
Query: 225 NPNDMTGETGT--------LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDM-PYPDL 275
MTG+T T + + APE L N ++ K DV++FG+ LWEI M PYP +
Sbjct: 166 ----MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 221
Query: 276 SFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAI 329
S+V ++ ++ R E P CP + +M+ CW NP RP E+ E +
Sbjct: 222 DLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 145/294 (49%), Gaps = 41/294 (13%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQE 104
WE+E + + +K + G +G V+ G++ + + V + E+ E F +E
Sbjct: 6 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--------FLKE 57
Query: 105 VAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKN 164
AV ++ HPN+ + +G +I ++E++ G L YL +
Sbjct: 58 AAVMKEIKHPNLVQLLGVCTREPPFYI----------------IIEFMTYGNLLDYLREC 101
Query: 165 RRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEAS 224
R++++ V++ +A ++ + YL + +HRD+ N L+ +N VK+ADFG++R+
Sbjct: 102 NRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL--- 158
Query: 225 NPNDMTGETGT--------LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDM-PYPDL 275
MTG+T T + + APE L N ++ K DV++FG+ LWEI M PYP +
Sbjct: 159 ----MTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 214
Query: 276 SFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAI 329
S+V ++ ++ R E P CP + +M+ CW NP RP E+ E +
Sbjct: 215 DPSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 141 bits (356), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 143/294 (48%), Gaps = 41/294 (13%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQE 104
WE+E + + +K + G +G V+ G++ + + V + E+ E F +E
Sbjct: 13 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--------FLKE 64
Query: 105 VAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKN 164
AV ++ HPN+ + +G +I + E++ G L YL +
Sbjct: 65 AAVMKEIKHPNLVQLLGVCTREPPFYI----------------ITEFMTYGNLLDYLREC 108
Query: 165 RRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEAS 224
R+++ V++ +A ++ + YL + +HRD+ N L+ +N VK+ADFG++R+
Sbjct: 109 NRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL--- 165
Query: 225 NPNDMTGETGT--------LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDM-PYPDL 275
MTG+T T + + APE L N ++ K DV++FG+ LWEI M PYP +
Sbjct: 166 ----MTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 221
Query: 276 SFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAI 329
S+V ++ ++ R E P CP + +M+ CW NP RP E+ E +
Sbjct: 222 DLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 141 bits (356), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 143/294 (48%), Gaps = 41/294 (13%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQE 104
WE+E + + +K + G +G V+ G++ + + V + E+ E F +E
Sbjct: 13 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--------FLKE 64
Query: 105 VAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKN 164
AV ++ HPN+ + +G +I + E++ G L YL +
Sbjct: 65 AAVMKEIKHPNLVQLLGVCTREPPFYI----------------ITEFMTYGNLLDYLREC 108
Query: 165 RRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEAS 224
R+++ V++ +A ++ + YL + +HRD+ N L+ +N VK+ADFG++R+
Sbjct: 109 NRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL--- 165
Query: 225 NPNDMTGETGT--------LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDM-PYPDL 275
MTG+T T + + APE L N ++ K DV++FG+ LWEI M PYP +
Sbjct: 166 ----MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 221
Query: 276 SFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAI 329
S+V ++ ++ R E P CP + +M+ CW NP RP E+ E +
Sbjct: 222 DLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 141 bits (356), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 152/298 (51%), Gaps = 35/298 (11%)
Query: 44 DWEIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQ 103
DWEI ++ + I G+FGTV++G + G DVAVK+L+ A AF
Sbjct: 30 DWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLN-------VTAPTPQQLQAFKN 81
Query: 104 EVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIK 163
EV V K H N+ F+G + +V ++ G +L +L
Sbjct: 82 EVGVLRKTRHVNILLFMGYSTKPQ-----------------LAIVTQWCEGSSLYHHL-H 123
Query: 164 NRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEA 223
K ++ +A A+G+ YLH++ I+HRD+K+ N+ L ++ TVKI DFG+A ++
Sbjct: 124 IIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKS 183
Query: 224 --SNPNDMTGETGTLGYMAPEVL---NGNPYNRKCDVYSFGICLWEIYCCDMPYPDL-SF 277
S + +G++ +MAPEV+ + NPY+ + DVY+FGI L+E+ +PY ++ +
Sbjct: 184 RWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 243
Query: 278 SEVTSAVVRQNLRPEIPRC---CPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTS 332
++ V R L P++ + CP ++ +M C D+RP ++++ +E + S
Sbjct: 244 DQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS 301
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 141 bits (356), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 143/294 (48%), Gaps = 41/294 (13%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQE 104
WE+E + + +K + G +G V+ G++ + + V + E+ E F +E
Sbjct: 9 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--------FLKE 60
Query: 105 VAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKN 164
AV ++ HPN+ + +G +I + E++ G L YL +
Sbjct: 61 AAVMKEIKHPNLVQLLGVCTREPPFYI----------------ITEFMTYGNLLDYLREC 104
Query: 165 RRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEAS 224
R+++ V++ +A ++ + YL + +HRD+ N L+ +N VK+ADFG++R+
Sbjct: 105 NRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL--- 161
Query: 225 NPNDMTGETGT--------LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDM-PYPDL 275
MTG+T T + + APE L N ++ K DV++FG+ LWEI M PYP +
Sbjct: 162 ----MTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 217
Query: 276 SFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAI 329
S+V ++ ++ R E P CP + +M+ CW NP RP E+ E +
Sbjct: 218 DLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 270
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 141 bits (356), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 152/298 (51%), Gaps = 35/298 (11%)
Query: 44 DWEIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQ 103
DWEI ++ + I G+FGTV++G + G DVAVK+L+ A AF
Sbjct: 22 DWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLN-------VTAPTPQQLQAFKN 73
Query: 104 EVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIK 163
EV V K H N+ F+G + +V ++ G +L +L
Sbjct: 74 EVGVLRKTRHVNILLFMGYSTKPQ-----------------LAIVTQWCEGSSLYHHL-H 115
Query: 164 NRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEA 223
K ++ +A A+G+ YLH++ I+HRD+K+ N+ L ++ TVKI DFG+A ++
Sbjct: 116 IIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKS 175
Query: 224 --SNPNDMTGETGTLGYMAPEVL---NGNPYNRKCDVYSFGICLWEIYCCDMPYPDL-SF 277
S + +G++ +MAPEV+ + NPY+ + DVY+FGI L+E+ +PY ++ +
Sbjct: 176 RWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 235
Query: 278 SEVTSAVVRQNLRPEIPRC---CPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTS 332
++ V R L P++ + CP ++ +M C D+RP ++++ +E + S
Sbjct: 236 DQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS 293
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 141 bits (355), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 143/294 (48%), Gaps = 41/294 (13%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQE 104
WE+E + + +K + G +G V+ G++ + + V + E+ E F +E
Sbjct: 21 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--------FLKE 72
Query: 105 VAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKN 164
AV ++ HPN+ + +G +I + E++ G L YL +
Sbjct: 73 AAVMKEIKHPNLVQLLGVCTREPPFYI----------------ITEFMTYGNLLDYLREC 116
Query: 165 RRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEAS 224
R+++ V++ +A ++ + YL + +HRD+ N L+ +N VK+ADFG++R+
Sbjct: 117 NRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL--- 173
Query: 225 NPNDMTGETGT--------LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDM-PYPDL 275
MTG+T T + + APE L N ++ K DV++FG+ LWEI M PYP +
Sbjct: 174 ----MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 229
Query: 276 SFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAI 329
S+V ++ ++ R E P CP + +M+ CW NP RP E+ E +
Sbjct: 230 DLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 282
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 141 bits (355), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 143/294 (48%), Gaps = 41/294 (13%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQE 104
WE+E + + +K + G +G V+ G++ + + V + E+ E F +E
Sbjct: 10 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--------FLKE 61
Query: 105 VAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKN 164
AV ++ HPN+ + +G +I + E++ G L YL +
Sbjct: 62 AAVMKEIKHPNLVQLLGVCTREPPFYI----------------ITEFMTYGNLLDYLREC 105
Query: 165 RRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEAS 224
R+++ V++ +A ++ + YL + +HRD+ N L+ +N VK+ADFG++R+
Sbjct: 106 NRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL--- 162
Query: 225 NPNDMTGETGT--------LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDM-PYPDL 275
MTG+T T + + APE L N ++ K DV++FG+ LWEI M PYP +
Sbjct: 163 ----MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 218
Query: 276 SFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAI 329
S+V ++ ++ R E P CP + +M+ CW NP RP E+ E +
Sbjct: 219 DLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 271
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 141 bits (355), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 143/294 (48%), Gaps = 41/294 (13%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQE 104
WE+E + + +K + G +G V+ G++ + + V + E+ E F +E
Sbjct: 10 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--------FLKE 61
Query: 105 VAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKN 164
AV ++ HPN+ + +G +I + E++ G L YL +
Sbjct: 62 AAVMKEIKHPNLVQLLGVCTREPPFYI----------------ITEFMTYGNLLDYLREC 105
Query: 165 RRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEAS 224
R+++ V++ +A ++ + YL + +HRD+ N L+ +N VK+ADFG++R+
Sbjct: 106 NRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL--- 162
Query: 225 NPNDMTGETGT--------LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDM-PYPDL 275
MTG+T T + + APE L N ++ K DV++FG+ LWEI M PYP +
Sbjct: 163 ----MTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 218
Query: 276 SFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAI 329
S+V ++ ++ R E P CP + +M+ CW NP RP E+ E +
Sbjct: 219 DLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 271
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 141 bits (355), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 143/303 (47%), Gaps = 41/303 (13%)
Query: 36 NFLKKQRQDWEIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIA 95
N + WE+E + + +K + G +G V+ G++ + + V + E+ E
Sbjct: 18 NLYFQSMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEE--- 74
Query: 96 ALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGG 155
F +E AV ++ HPN+ + +G +I V EY+P G
Sbjct: 75 -----FLKEAAVMKEIKHPNLVQLLGVCTLEPPFYI----------------VTEYMPYG 113
Query: 156 ALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIAD 215
L YL + R ++ V++ +A ++ + YL + +HRD+ N L+ +N VK+AD
Sbjct: 114 NLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVAD 173
Query: 216 FGVARVEASNPNDMTGETGT--------LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYC 267
FG++R+ MTG+T T + + APE L N ++ K DV++FG+ LWEI
Sbjct: 174 FGLSRL-------MTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIAT 226
Query: 268 CDM-PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSML 326
M PYP + S+V ++ + R E P CP + +M+ CW +P RP E
Sbjct: 227 YGMSPYPGIDLSQVYD-LLEKGYRMEQPEGCPPKVYELMRACWKWSPADRPSFAETHQAF 285
Query: 327 EAI 329
E +
Sbjct: 286 ETM 288
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 141 bits (355), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 143/294 (48%), Gaps = 41/294 (13%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQE 104
WE+E + + +K + G +G V+ G++ + + V + E+ E F +E
Sbjct: 10 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--------FLKE 61
Query: 105 VAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKN 164
AV ++ HPN+ + +G +I + E++ G L YL +
Sbjct: 62 AAVMKEIKHPNLVQLLGVCTREPPFYI----------------ITEFMTYGNLLDYLREC 105
Query: 165 RRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEAS 224
R+++ V++ +A ++ + YL + +HRD+ N L+ +N VK+ADFG++R+
Sbjct: 106 NRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL--- 162
Query: 225 NPNDMTGETGT--------LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDM-PYPDL 275
MTG+T T + + APE L N ++ K DV++FG+ LWEI M PYP +
Sbjct: 163 ----MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 218
Query: 276 SFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAI 329
S+V ++ ++ R E P CP + +M+ CW NP RP E+ E +
Sbjct: 219 DLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 271
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 141 bits (355), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 143/294 (48%), Gaps = 41/294 (13%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQE 104
WE+E + + +K + G +G V+ G++ + + V + E+ E F +E
Sbjct: 13 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--------FLKE 64
Query: 105 VAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKN 164
AV ++ HPN+ + +G +I + E++ G L YL +
Sbjct: 65 AAVMKEIKHPNLVQLLGVCTREPPFYI----------------ITEFMTYGNLLDYLREC 108
Query: 165 RRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEAS 224
R+++ V++ +A ++ + YL + +HRD+ N L+ +N VK+ADFG++R+
Sbjct: 109 NRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL--- 165
Query: 225 NPNDMTGETGT--------LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDM-PYPDL 275
MTG+T T + + APE L N ++ K DV++FG+ LWEI M PYP +
Sbjct: 166 ----MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 221
Query: 276 SFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAI 329
S+V ++ ++ R E P CP + +M+ CW NP RP E+ E +
Sbjct: 222 DLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 141 bits (355), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 152/298 (51%), Gaps = 35/298 (11%)
Query: 44 DWEIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQ 103
DWEI ++ + I G+FGTV++G + G DVAVK+L+ A AF
Sbjct: 2 DWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLN-------VTAPTPQQLQAFKN 53
Query: 104 EVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIK 163
EV V K H N+ F+G + +V ++ G +L +L
Sbjct: 54 EVGVLRKTRHVNILLFMGYSTKPQ-----------------LAIVTQWCEGSSLYHHL-H 95
Query: 164 NRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEA 223
K ++ +A A+G+ YLH++ I+HRD+K+ N+ L ++ TVKI DFG+A ++
Sbjct: 96 IIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKS 155
Query: 224 --SNPNDMTGETGTLGYMAPEVL---NGNPYNRKCDVYSFGICLWEIYCCDMPYPDL-SF 277
S + +G++ +MAPEV+ + NPY+ + DVY+FGI L+E+ +PY ++ +
Sbjct: 156 RWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 215
Query: 278 SEVTSAVVRQNLRPEIPRC---CPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTS 332
++ V R L P++ + CP ++ +M C D+RP ++++ +E + S
Sbjct: 216 DQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS 273
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 141 bits (355), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 143/294 (48%), Gaps = 41/294 (13%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQE 104
WE+E + + +K + G +G V+ G++ + + V + E+ E F +E
Sbjct: 12 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--------FLKE 63
Query: 105 VAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKN 164
AV ++ HPN+ + +G +I + E++ G L YL +
Sbjct: 64 AAVMKEIKHPNLVQLLGVCTREPPFYI----------------ITEFMTYGNLLDYLREC 107
Query: 165 RRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEAS 224
R+++ V++ +A ++ + YL + +HRD+ N L+ +N VK+ADFG++R+
Sbjct: 108 NRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL--- 164
Query: 225 NPNDMTGETGT--------LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDM-PYPDL 275
MTG+T T + + APE L N ++ K DV++FG+ LWEI M PYP +
Sbjct: 165 ----MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 220
Query: 276 SFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAI 329
S+V ++ ++ R E P CP + +M+ CW NP RP E+ E +
Sbjct: 221 DLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 273
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 140 bits (354), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 143/294 (48%), Gaps = 41/294 (13%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQE 104
WE+E + + +K + G +G V+ G++ + + V + E+ E F +E
Sbjct: 8 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--------FLKE 59
Query: 105 VAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKN 164
AV ++ HPN+ + +G +I + E++ G L YL +
Sbjct: 60 AAVMKEIKHPNLVQLLGVCTREPPFYI----------------ITEFMTYGNLLDYLREC 103
Query: 165 RRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEAS 224
R+++ V++ +A ++ + YL + +HRD+ N L+ +N VK+ADFG++R+
Sbjct: 104 NRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL--- 160
Query: 225 NPNDMTGETGT--------LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDM-PYPDL 275
MTG+T T + + APE L N ++ K DV++FG+ LWEI M PYP +
Sbjct: 161 ----MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 216
Query: 276 SFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAI 329
S+V ++ ++ R E P CP + +M+ CW NP RP E+ E +
Sbjct: 217 DLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 140 bits (354), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 144/294 (48%), Gaps = 41/294 (13%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQE 104
WE+E + + +K + G +G V+ G++ + + V + E+ E F +E
Sbjct: 215 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--------FLKE 266
Query: 105 VAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKN 164
AV ++ HPN+ + +G +I + E++ G L YL +
Sbjct: 267 AAVMKEIKHPNLVQLLGVCTREPPFYI----------------ITEFMTYGNLLDYLREC 310
Query: 165 RRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEAS 224
R++++ V++ +A ++ + YL + +HR++ N L+ +N VK+ADFG++R+
Sbjct: 311 NRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRL--- 367
Query: 225 NPNDMTGETGT--------LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDM-PYPDL 275
MTG+T T + + APE L N ++ K DV++FG+ LWEI M PYP +
Sbjct: 368 ----MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 423
Query: 276 SFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAI 329
S+V ++ ++ R E P CP + +M+ CW NP RP E+ E +
Sbjct: 424 DLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 476
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 143/294 (48%), Gaps = 41/294 (13%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQE 104
WE+E + + +K + G +G V+ G++ + + V + E+ E F +E
Sbjct: 8 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--------FLKE 59
Query: 105 VAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKN 164
AV ++ HPN+ + +G +I + E++ G L YL +
Sbjct: 60 AAVMKEIKHPNLVQLLGVCTREPPFYI----------------ITEFMTYGNLLDYLREC 103
Query: 165 RRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEAS 224
R+++ V++ +A ++ + YL + +HRD+ N L+ +N VK+ADFG++R+
Sbjct: 104 NRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL--- 160
Query: 225 NPNDMTGETGT--------LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDM-PYPDL 275
MTG+T T + + APE L N ++ K DV++FG+ LWEI M PYP +
Sbjct: 161 ----MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 216
Query: 276 SFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAI 329
S+V ++ ++ R E P CP + +M+ CW NP RP E+ E +
Sbjct: 217 DLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 144/294 (48%), Gaps = 41/294 (13%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQE 104
WE+E + + +K + G +G V+ G++ + + V + E+ E F +E
Sbjct: 6 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--------FLKE 57
Query: 105 VAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKN 164
AV ++ HPN+ + +G +I + E++ G L YL +
Sbjct: 58 AAVMKEIKHPNLVQLLGVCTREPPFYI----------------ITEFMTYGNLLDYLREC 101
Query: 165 RRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEAS 224
R++++ V++ +A ++ + YL + +HRD+ N L+ +N VK+ADFG++R+
Sbjct: 102 NRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL--- 158
Query: 225 NPNDMTGETGT--------LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDM-PYPDL 275
MTG+T T + + APE L N ++ K DV++FG+ LWEI M PYP +
Sbjct: 159 ----MTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 214
Query: 276 SFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAI 329
S+V ++ ++ R E P CP + +M+ CW NP RP E+ E +
Sbjct: 215 DPSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 145/288 (50%), Gaps = 42/288 (14%)
Query: 47 IEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVA 106
I+ ++ ++ V+ RG FG V + + DVA+K ++ +E+E R AF E+
Sbjct: 6 IDYKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIE-------SESE----RKAFIVELR 54
Query: 107 VWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRR 166
+++HPN+ K GA + N C+V+EY GG+L Y + +
Sbjct: 55 QLSRVNHPNIVKLYGACL------------------NPVCLVMEYAEGGSL--YNVLHGA 94
Query: 167 RKLAFKVV---VQLALDLARGLSYLHSQK---IVHRDVKTENMLLDKNRTV-KIADFGVA 219
L + + L ++G++YLHS + ++HRD+K N+LL TV KI DFG A
Sbjct: 95 EPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA 154
Query: 220 RVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSE 279
MT G+ +MAPEV G+ Y+ KCDV+S+GI LWE+ P+ ++
Sbjct: 155 ---CDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPA 211
Query: 280 V-TSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSML 326
V RP + + P + ++M RCW +P +RP M+E+V ++
Sbjct: 212 FRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIM 259
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 145/288 (50%), Gaps = 42/288 (14%)
Query: 47 IEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVA 106
I+ ++ ++ V+ RG FG V + + DVA+K ++ +E+E R AF E+
Sbjct: 5 IDYKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIE-------SESE----RKAFIVELR 53
Query: 107 VWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRR 166
+++HPN+ K GA + N C+V+EY GG+L Y + +
Sbjct: 54 QLSRVNHPNIVKLYGACL------------------NPVCLVMEYAEGGSL--YNVLHGA 93
Query: 167 RKLAFKVV---VQLALDLARGLSYLHSQK---IVHRDVKTENMLLDKNRTV-KIADFGVA 219
L + + L ++G++YLHS + ++HRD+K N+LL TV KI DFG A
Sbjct: 94 EPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA 153
Query: 220 RVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSE 279
MT G+ +MAPEV G+ Y+ KCDV+S+GI LWE+ P+ ++
Sbjct: 154 ---CDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPA 210
Query: 280 V-TSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSML 326
V RP + + P + ++M RCW +P +RP M+E+V ++
Sbjct: 211 FRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIM 258
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 143/294 (48%), Gaps = 41/294 (13%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQE 104
WE+E + + +K + G +G V+ G++ + + V + E+ E F +E
Sbjct: 254 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--------FLKE 305
Query: 105 VAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKN 164
AV ++ HPN+ + +G +I + E++ G L YL +
Sbjct: 306 AAVMKEIKHPNLVQLLGVCTREPPFYI----------------ITEFMTYGNLLDYLREC 349
Query: 165 RRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEAS 224
R+++ V++ +A ++ + YL + +HR++ N L+ +N VK+ADFG++R+
Sbjct: 350 NRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRL--- 406
Query: 225 NPNDMTGETGT--------LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDM-PYPDL 275
MTG+T T + + APE L N ++ K DV++FG+ LWEI M PYP +
Sbjct: 407 ----MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 462
Query: 276 SFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAI 329
S+V ++ ++ R E P CP + +M+ CW NP RP E+ E +
Sbjct: 463 DLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 515
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 142/291 (48%), Gaps = 35/291 (12%)
Query: 47 IEPSKLVIKSVIARGTFGTVHRGLYDGHD-VAVKLLDWGEEGHRTEAEIAALRSAFTQEV 105
I+PS+L I G FG VH G + D VA+K + EG +E + F +E
Sbjct: 4 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI---REGAMSEED-------FIEEA 53
Query: 106 AVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNR 165
V KL HP + + G + + + C+V E++ G L YL + +
Sbjct: 54 EVMMKLSHPKLVQLYGVCLEQAPI----------------CLVFEFMEHGCLSDYL-RTQ 96
Query: 166 RRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASN 225
R A + ++ + LD+ G++YL ++HRD+ N L+ +N+ +K++DFG+ R
Sbjct: 97 RGLFAAETLLGMCLDVCEGMAYLEEASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD- 155
Query: 226 PNDMTGETGT---LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSEVT 281
+ T TGT + + +PEV + + Y+ K DV+SFG+ +WE++ +PY + S SEV
Sbjct: 156 -DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV 214
Query: 282 SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTS 332
+ R PR + + +M CW P+ RP ++ L AI S
Sbjct: 215 ED-ISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAAIAAS 264
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 143/294 (48%), Gaps = 41/294 (13%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQE 104
WE+E + + +K + G +G V+ G++ + + V + E+ E F +E
Sbjct: 212 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--------FLKE 263
Query: 105 VAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKN 164
AV ++ HPN+ + +G +I + E++ G L YL +
Sbjct: 264 AAVMKEIKHPNLVQLLGVCTREPPFYI----------------ITEFMTYGNLLDYLREC 307
Query: 165 RRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEAS 224
R+++ V++ +A ++ + YL + +HR++ N L+ +N VK+ADFG++R+
Sbjct: 308 NRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRL--- 364
Query: 225 NPNDMTGETGT--------LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDM-PYPDL 275
MTG+T T + + APE L N ++ K DV++FG+ LWEI M PYP +
Sbjct: 365 ----MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 420
Query: 276 SFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAI 329
S+V ++ ++ R E P CP + +M+ CW NP RP E+ E +
Sbjct: 421 DLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 473
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 138 bits (347), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 142/293 (48%), Gaps = 35/293 (11%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHD-VAVKLLDWGEEGHRTEAEIAALRSAFTQ 103
W I+PS+L I G FG VH G + D VA+K + EG +E + F +
Sbjct: 5 WVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI---REGAMSEED-------FIE 54
Query: 104 EVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIK 163
E V KL HP + + G + + + C+V E++ G L YL +
Sbjct: 55 EAEVMMKLSHPKLVQLYGVCLEQAPI----------------CLVFEFMEHGCLSDYL-R 97
Query: 164 NRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEA 223
+R A + ++ + LD+ G++YL ++HRD+ N L+ +N+ +K++DFG+ R
Sbjct: 98 TQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVL 157
Query: 224 SNPNDMTGETGT---LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSE 279
+ T TGT + + +PEV + + Y+ K DV+SFG+ +WE++ +PY + S SE
Sbjct: 158 D--DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 215
Query: 280 VTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTS 332
V + R PR + + +M CW P+ RP ++ L I S
Sbjct: 216 VVED-ISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 138 bits (347), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 142/293 (48%), Gaps = 35/293 (11%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHD-VAVKLLDWGEEGHRTEAEIAALRSAFTQ 103
W I+PS+L I G FG VH G + D VA+K + EG +E + F +
Sbjct: 3 WVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI---REGAMSEED-------FIE 52
Query: 104 EVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIK 163
E V KL HP + + G + + + C+V E++ G L YL +
Sbjct: 53 EAEVMMKLSHPKLVQLYGVCLEQAPI----------------CLVTEFMEHGCLSDYL-R 95
Query: 164 NRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEA 223
+R A + ++ + LD+ G++YL ++HRD+ N L+ +N+ +K++DFG+ R
Sbjct: 96 TQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVL 155
Query: 224 SNPNDMTGETGT---LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSE 279
+ T TGT + + +PEV + + Y+ K DV+SFG+ +WE++ +PY + S SE
Sbjct: 156 D--DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 213
Query: 280 VTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTS 332
V + R PR + + +M CW P+ RP ++ L I S
Sbjct: 214 VVED-ISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 137 bits (346), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 139/293 (47%), Gaps = 35/293 (11%)
Query: 42 RQDWEIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAF 101
R W + +L + I +G FG V G Y G+ VAVK + + A AF
Sbjct: 13 RSGWALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCI-----------KNDATAQAF 61
Query: 102 TQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYL 161
E +V +L H N+ + +G I E G + +V EY+ G+L YL
Sbjct: 62 LAEASVMTQLRHSNLVQLLGV--------IVEEKGGL-------YIVTEYMAKGSLVDYL 106
Query: 162 IKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARV 221
R L +++ +LD+ + YL VHRD+ N+L+ ++ K++DFG+ +
Sbjct: 107 RSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK- 165
Query: 222 EASNPNDMTGETGTL--GYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCD-MPYPDLSFS 278
EAS+ D TG L + APE L ++ K DV+SFGI LWEIY +PYP +
Sbjct: 166 EASSTQD----TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK 221
Query: 279 EVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDT 331
+V V + + + P CP ++ VMK CW + RP ++ LE I T
Sbjct: 222 DVVPR-VEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT 273
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 137 bits (345), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 140/293 (47%), Gaps = 35/293 (11%)
Query: 42 RQDWEIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAF 101
R W + +L + I +G FG V G Y G+ VAVK + + A AF
Sbjct: 185 RSGWALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCI-----------KNDATAQAF 233
Query: 102 TQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYL 161
E +V +L H N+ + +G I E G + +V EY+ G+L YL
Sbjct: 234 LAEASVMTQLRHSNLVQLLGV--------IVEEKGGLY-------IVTEYMAKGSLVDYL 278
Query: 162 IKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARV 221
R L +++ +LD+ + YL VHRD+ N+L+ ++ K++DFG+ +
Sbjct: 279 RSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK- 337
Query: 222 EASNPNDMTGETGTL--GYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCD-MPYPDLSFS 278
EAS+ D TG L + APE L ++ K DV+SFGI LWEIY +PYP +
Sbjct: 338 EASSTQD----TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK 393
Query: 279 EVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDT 331
+V V + + + P CP ++ +VMK CW + RP ++ LE I T
Sbjct: 394 DVVPR-VEKGYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRT 445
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/313 (31%), Positives = 147/313 (46%), Gaps = 43/313 (13%)
Query: 38 LKKQRQDWEIEPSKLVI--KSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIA 95
L + Q I PS L++ VI RG FG V+ G LLD +G + +
Sbjct: 15 LVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHG---------TLLD--NDGKKIHCAVK 63
Query: 96 ALR--------SAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCV 147
+L S F E + HPNV +G + S P V
Sbjct: 64 SLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSE-----------GSP----LV 108
Query: 148 VVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDK 207
V+ Y+ G L+ + I+N K ++ L +A+G+ YL S+K VHRD+ N +LD+
Sbjct: 109 VLPYMKHGDLRNF-IRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDE 167
Query: 208 NRTVKIADFGVAR----VEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLW 263
TVK+ADFG+AR E + ++ TG + +MA E L + K DV+SFG+ LW
Sbjct: 168 KFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW 227
Query: 264 EIYCCDM-PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 322
E+ PYPD++ ++T ++ Q R P CP L VM +CW + RP E+
Sbjct: 228 ELMTRGAPPYPDVNTFDITVYLL-QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSEL 286
Query: 323 VSMLEAIDTSKGG 335
VS + AI ++ G
Sbjct: 287 VSRISAIFSTFIG 299
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/313 (31%), Positives = 147/313 (46%), Gaps = 43/313 (13%)
Query: 38 LKKQRQDWEIEPSKLVI--KSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIA 95
L + Q I PS L++ VI RG FG V+ G LLD +G + +
Sbjct: 15 LVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHG---------TLLD--NDGKKIHCAVK 63
Query: 96 ALR--------SAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCV 147
+L S F E + HPNV +G + S P V
Sbjct: 64 SLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSE-----------GSP----LV 108
Query: 148 VVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDK 207
V+ Y+ G L+ + I+N K ++ L +A+G+ YL S+K VHRD+ N +LD+
Sbjct: 109 VLPYMKHGDLRNF-IRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDE 167
Query: 208 NRTVKIADFGVAR----VEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLW 263
TVK+ADFG+AR E + ++ TG + +MA E L + K DV+SFG+ LW
Sbjct: 168 KFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW 227
Query: 264 EIYCCDM-PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 322
E+ PYPD++ ++T ++ Q R P CP L VM +CW + RP E+
Sbjct: 228 ELMTRGAPPYPDVNTFDITVYLL-QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSEL 286
Query: 323 VSMLEAIDTSKGG 335
VS + AI ++ G
Sbjct: 287 VSRISAIFSTFIG 299
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/313 (31%), Positives = 147/313 (46%), Gaps = 43/313 (13%)
Query: 38 LKKQRQDWEIEPSKLVI--KSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIA 95
L + Q I PS L++ VI RG FG V+ G LLD +G + +
Sbjct: 16 LVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHG---------TLLD--NDGKKIHCAVK 64
Query: 96 ALR--------SAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCV 147
+L S F E + HPNV +G + S P V
Sbjct: 65 SLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSE-----------GSP----LV 109
Query: 148 VVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDK 207
V+ Y+ G L+ + I+N K ++ L +A+G+ YL S+K VHRD+ N +LD+
Sbjct: 110 VLPYMKHGDLRNF-IRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDE 168
Query: 208 NRTVKIADFGVAR----VEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLW 263
TVK+ADFG+AR E + ++ TG + +MA E L + K DV+SFG+ LW
Sbjct: 169 KFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW 228
Query: 264 EIYCCDM-PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 322
E+ PYPD++ ++T ++ Q R P CP L VM +CW + RP E+
Sbjct: 229 ELMTRGAPPYPDVNTFDITVYLL-QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSEL 287
Query: 323 VSMLEAIDTSKGG 335
VS + AI ++ G
Sbjct: 288 VSRISAIFSTFIG 300
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 135 bits (341), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 138/293 (47%), Gaps = 31/293 (10%)
Query: 42 RQDWEIEPSKLVIKSVIARGTFGTVHRGLY--DGHDVAVKLLDWGEEGHRTEAEIAALRS 99
+ W + LV+ I RG FG V G D VAVK E L++
Sbjct: 106 KDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSC--------RETLPPDLKA 157
Query: 100 AFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKT 159
F QE + + HPN+ + IG ++I V+E + GG T
Sbjct: 158 KFLQEARILKQYSHPNIVRLIGVCTQKQPIYI----------------VMELVQGGDFLT 201
Query: 160 YLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVA 219
+L + +L K ++Q+ D A G+ YL S+ +HRD+ N L+ + +KI+DFG++
Sbjct: 202 FL-RTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMS 260
Query: 220 RVEASNPNDMTG--ETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDM-PYPDLS 276
R EA +G + + APE LN Y+ + DV+SFGI LWE + PYP+LS
Sbjct: 261 REEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLS 320
Query: 277 FSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAI 329
++ T V + R P CP ++ +M++CW P +RP + L++I
Sbjct: 321 -NQQTREFVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 135 bits (341), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/313 (31%), Positives = 149/313 (47%), Gaps = 43/313 (13%)
Query: 38 LKKQRQDWEIEPSKLVI--KSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIA 95
L + Q I PS L++ VI RG FG V+ G LLD +G + +
Sbjct: 34 LVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHG---------TLLD--NDGKKIHCAVK 82
Query: 96 ALR--------SAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCV 147
+L S F E + HPNV +G + ++E + V
Sbjct: 83 SLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICL-------RSEGSPL--------V 127
Query: 148 VVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDK 207
V+ Y+ G L+ + I+N K ++ L +A+G+ YL S+K VHRD+ N +LD+
Sbjct: 128 VLPYMKHGDLRNF-IRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDE 186
Query: 208 NRTVKIADFGVAR----VEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLW 263
TVK+ADFG+AR E + ++ TG + +MA E L + K DV+SFG+ LW
Sbjct: 187 KFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW 246
Query: 264 EIYCCDM-PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 322
E+ PYPD++ ++T ++ Q R P CP L VM +CW + RP E+
Sbjct: 247 ELMTRGAPPYPDVNTFDITVYLL-QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSEL 305
Query: 323 VSMLEAIDTSKGG 335
VS + AI ++ G
Sbjct: 306 VSRISAIFSTFIG 318
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 135 bits (341), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/313 (31%), Positives = 149/313 (47%), Gaps = 43/313 (13%)
Query: 38 LKKQRQDWEIEPSKLVI--KSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIA 95
L + Q I PS L++ VI RG FG V+ G LLD +G + +
Sbjct: 8 LVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHG---------TLLD--NDGKKIHCAVK 56
Query: 96 ALR--------SAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCV 147
+L S F E + HPNV +G + ++E + V
Sbjct: 57 SLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICL-------RSEGSPL--------V 101
Query: 148 VVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDK 207
V+ Y+ G L+ + I+N K ++ L +A+G+ YL S+K VHRD+ N +LD+
Sbjct: 102 VLPYMKHGDLRNF-IRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDE 160
Query: 208 NRTVKIADFGVAR----VEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLW 263
TVK+ADFG+AR E + ++ TG + +MA E L + K DV+SFG+ LW
Sbjct: 161 KFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW 220
Query: 264 EIYCCDM-PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 322
E+ PYPD++ ++T ++ Q R P CP L VM +CW + RP E+
Sbjct: 221 ELMTRGAPPYPDVNTFDITVYLL-QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSEL 279
Query: 323 VSMLEAIDTSKGG 335
VS + AI ++ G
Sbjct: 280 VSRISAIFSTFIG 292
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/313 (31%), Positives = 149/313 (47%), Gaps = 43/313 (13%)
Query: 38 LKKQRQDWEIEPSKLVI--KSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIA 95
L + Q I PS L++ VI RG FG V+ G LLD +G + +
Sbjct: 35 LVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHG---------TLLD--NDGKKIHCAVK 83
Query: 96 ALR--------SAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCV 147
+L S F E + HPNV +G + ++E + V
Sbjct: 84 SLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICL-------RSEGSPL--------V 128
Query: 148 VVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDK 207
V+ Y+ G L+ + I+N K ++ L +A+G+ YL S+K VHRD+ N +LD+
Sbjct: 129 VLPYMKHGDLRNF-IRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDE 187
Query: 208 NRTVKIADFGVAR----VEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLW 263
TVK+ADFG+AR E + ++ TG + +MA E L + K DV+SFG+ LW
Sbjct: 188 KFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW 247
Query: 264 EIYCCDM-PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 322
E+ PYPD++ ++T ++ Q R P CP L VM +CW + RP E+
Sbjct: 248 ELMTRGAPPYPDVNTFDITVYLL-QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSEL 306
Query: 323 VSMLEAIDTSKGG 335
VS + AI ++ G
Sbjct: 307 VSRISAIFSTFIG 319
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/313 (31%), Positives = 147/313 (46%), Gaps = 43/313 (13%)
Query: 38 LKKQRQDWEIEPSKLVI--KSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIA 95
L + Q I PS L++ VI RG FG V+ G LLD +G + +
Sbjct: 11 LVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHG---------TLLD--NDGKKIHCAVK 59
Query: 96 ALR--------SAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCV 147
+L S F E + HPNV +G + S P V
Sbjct: 60 SLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSE-----------GSP----LV 104
Query: 148 VVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDK 207
V+ Y+ G L+ + I+N K ++ L +A+G+ YL S+K VHRD+ N +LD+
Sbjct: 105 VLPYMKHGDLRNF-IRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDE 163
Query: 208 NRTVKIADFGVAR----VEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLW 263
TVK+ADFG+AR E + ++ TG + +MA E L + K DV+SFG+ LW
Sbjct: 164 KFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW 223
Query: 264 EIYCCDM-PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 322
E+ PYPD++ ++T ++ Q R P CP L VM +CW + RP E+
Sbjct: 224 ELMTRGAPPYPDVNTFDITVYLL-QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSEL 282
Query: 323 VSMLEAIDTSKGG 335
VS + AI ++ G
Sbjct: 283 VSRISAIFSTFIG 295
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 138/290 (47%), Gaps = 35/290 (12%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQE 104
W + +L + I +G FG V G Y G+ VAVK + + A AF E
Sbjct: 1 WALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCI-----------KNDATAQAFLAE 49
Query: 105 VAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKN 164
+V +L H N+ + +G I E G + +V EY+ G+L YL
Sbjct: 50 ASVMTQLRHSNLVQLLGV--------IVEEKGGLY-------IVTEYMAKGSLVDYLRSR 94
Query: 165 RRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEAS 224
R L +++ +LD+ + YL VHRD+ N+L+ ++ K++DFG+ + EAS
Sbjct: 95 GRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK-EAS 153
Query: 225 NPNDMTGETGTL--GYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCD-MPYPDLSFSEVT 281
+ D TG L + APE L ++ K DV+SFGI LWEIY +PYP + +V
Sbjct: 154 STQD----TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV 209
Query: 282 SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDT 331
V + + + P CP ++ VMK CW + RP ++ LE I T
Sbjct: 210 PR-VEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT 258
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/313 (31%), Positives = 147/313 (46%), Gaps = 43/313 (13%)
Query: 38 LKKQRQDWEIEPSKLVI--KSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIA 95
L + Q I PS L++ VI RG FG V+ G LLD +G + +
Sbjct: 14 LVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHG---------TLLD--NDGKKIHCAVK 62
Query: 96 ALR--------SAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCV 147
+L S F E + HPNV +G + S P V
Sbjct: 63 SLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSE-----------GSP----LV 107
Query: 148 VVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDK 207
V+ Y+ G L+ + I+N K ++ L +A+G+ YL S+K VHRD+ N +LD+
Sbjct: 108 VLPYMKHGDLRNF-IRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDE 166
Query: 208 NRTVKIADFGVAR----VEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLW 263
TVK+ADFG+AR E + ++ TG + +MA E L + K DV+SFG+ LW
Sbjct: 167 KFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW 226
Query: 264 EIYCCDM-PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 322
E+ PYPD++ ++T ++ Q R P CP L VM +CW + RP E+
Sbjct: 227 ELMTRGAPPYPDVNTFDITVYLL-QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSEL 285
Query: 323 VSMLEAIDTSKGG 335
VS + AI ++ G
Sbjct: 286 VSRISAIFSTFIG 298
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/313 (31%), Positives = 147/313 (46%), Gaps = 43/313 (13%)
Query: 38 LKKQRQDWEIEPSKLVI--KSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIA 95
L + Q I PS L++ VI RG FG V+ G LLD +G + +
Sbjct: 16 LVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHG---------TLLD--NDGKKIHCAVK 64
Query: 96 ALR--------SAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCV 147
+L S F E + HPNV +G + S P V
Sbjct: 65 SLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSE-----------GSP----LV 109
Query: 148 VVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDK 207
V+ Y+ G L+ + I+N K ++ L +A+G+ YL S+K VHRD+ N +LD+
Sbjct: 110 VLPYMKHGDLRNF-IRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDE 168
Query: 208 NRTVKIADFGVAR----VEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLW 263
TVK+ADFG+AR E + ++ TG + +MA E L + K DV+SFG+ LW
Sbjct: 169 KFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW 228
Query: 264 EIYCCDM-PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 322
E+ PYPD++ ++T ++ Q R P CP L VM +CW + RP E+
Sbjct: 229 ELMTRGAPPYPDVNTFDITVYLL-QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSEL 287
Query: 323 VSMLEAIDTSKGG 335
VS + AI ++ G
Sbjct: 288 VSRISAIFSTFIG 300
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 138/290 (47%), Gaps = 35/290 (12%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQE 104
W + +L + I +G FG V G Y G+ VAVK + + A AF E
Sbjct: 7 WALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCI-----------KNDATAQAFLAE 55
Query: 105 VAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKN 164
+V +L H N+ + +G I E G + +V EY+ G+L YL
Sbjct: 56 ASVMTQLRHSNLVQLLGV--------IVEEKGGLY-------IVTEYMAKGSLVDYLRSR 100
Query: 165 RRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEAS 224
R L +++ +LD+ + YL VHRD+ N+L+ ++ K++DFG+ + EAS
Sbjct: 101 GRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK-EAS 159
Query: 225 NPNDMTGETGTL--GYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCD-MPYPDLSFSEVT 281
+ D TG L + APE L ++ K DV+SFGI LWEIY +PYP + +V
Sbjct: 160 STQD----TGKLPVKWTAPEALREAAFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV 215
Query: 282 SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDT 331
V + + + P CP ++ VMK CW + RP ++ LE I T
Sbjct: 216 PR-VEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT 264
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 138/293 (47%), Gaps = 31/293 (10%)
Query: 42 RQDWEIEPSKLVIKSVIARGTFGTVHRGLY--DGHDVAVKLLDWGEEGHRTEAEIAALRS 99
+ W + LV+ I RG FG V G D VAVK E L++
Sbjct: 106 KDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSC--------RETLPPDLKA 157
Query: 100 AFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKT 159
F QE + + HPN+ + IG ++I V+E + GG T
Sbjct: 158 KFLQEARILKQYSHPNIVRLIGVCTQKQPIYI----------------VMELVQGGDFLT 201
Query: 160 YLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVA 219
+L + +L K ++Q+ D A G+ YL S+ +HRD+ N L+ + +KI+DFG++
Sbjct: 202 FL-RTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMS 260
Query: 220 RVEASNPNDMTG--ETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDM-PYPDLS 276
R EA +G + + APE LN Y+ + DV+SFGI LWE + PYP+LS
Sbjct: 261 REEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLS 320
Query: 277 FSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAI 329
++ T V + R P CP ++ +M++CW P +RP + L++I
Sbjct: 321 -NQQTREFVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/313 (31%), Positives = 147/313 (46%), Gaps = 43/313 (13%)
Query: 38 LKKQRQDWEIEPSKLVI--KSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIA 95
L + Q I PS L++ VI RG FG V+ G LLD +G + +
Sbjct: 13 LVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHG---------TLLD--NDGKKIHCAVK 61
Query: 96 ALR--------SAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCV 147
+L S F E + HPNV +G + S P V
Sbjct: 62 SLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSE-----------GSP----LV 106
Query: 148 VVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDK 207
V+ Y+ G L+ + I+N K ++ L +A+G+ YL S+K VHRD+ N +LD+
Sbjct: 107 VLPYMKHGDLRNF-IRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDE 165
Query: 208 NRTVKIADFGVAR----VEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLW 263
TVK+ADFG+AR E + ++ TG + +MA E L + K DV+SFG+ LW
Sbjct: 166 KFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW 225
Query: 264 EIYCCDM-PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 322
E+ PYPD++ ++T ++ Q R P CP L VM +CW + RP E+
Sbjct: 226 ELMTRGAPPYPDVNTFDITVYLL-QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSEL 284
Query: 323 VSMLEAIDTSKGG 335
VS + AI ++ G
Sbjct: 285 VSRISAIFSTFIG 297
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 142/291 (48%), Gaps = 35/291 (12%)
Query: 47 IEPSKLVIKSVIARGTFGTVHRGLYDGHD-VAVKLLDWGEEGHRTEAEIAALRSAFTQEV 105
I+PS+L I G FG VH G + D VA+K + +EG +E + F +E
Sbjct: 24 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI---KEGSMSEDD-------FIEEA 73
Query: 106 AVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNR 165
V KL HP + + G + + + C+V E++ G L YL + +
Sbjct: 74 EVMMKLSHPKLVQLYGVCLEQAPI----------------CLVFEFMEHGCLSDYL-RTQ 116
Query: 166 RRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASN 225
R A + ++ + LD+ G++YL ++HRD+ N L+ +N+ +K++DFG+ R
Sbjct: 117 RGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD- 175
Query: 226 PNDMTGETGT---LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSEVT 281
+ T TGT + + +PEV + + Y+ K DV+SFG+ +WE++ +PY + S SEV
Sbjct: 176 -DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV 234
Query: 282 SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTS 332
+ R PR + + +M CW P+ RP ++ L I S
Sbjct: 235 ED-ISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 284
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 141/291 (48%), Gaps = 35/291 (12%)
Query: 47 IEPSKLVIKSVIARGTFGTVHRGLYDGHD-VAVKLLDWGEEGHRTEAEIAALRSAFTQEV 105
I+PS+L I G FG VH G + D VA+K + EG +E + F +E
Sbjct: 2 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI---REGAMSEED-------FIEEA 51
Query: 106 AVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNR 165
V KL HP + + G + + + C+V E++ G L YL + +
Sbjct: 52 EVMMKLSHPKLVQLYGVCLEQAPI----------------CLVFEFMEHGCLSDYL-RTQ 94
Query: 166 RRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASN 225
R A + ++ + LD+ G++YL ++HRD+ N L+ +N+ +K++DFG+ R
Sbjct: 95 RGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD- 153
Query: 226 PNDMTGETGT---LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSEVT 281
+ T TGT + + +PEV + + Y+ K DV+SFG+ +WE++ +PY + S SEV
Sbjct: 154 -DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV 212
Query: 282 SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTS 332
+ R PR + + +M CW P+ RP ++ L I S
Sbjct: 213 ED-ISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 262
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 141/291 (48%), Gaps = 35/291 (12%)
Query: 47 IEPSKLVIKSVIARGTFGTVHRGLYDGHD-VAVKLLDWGEEGHRTEAEIAALRSAFTQEV 105
I+PS+L I G FG VH G + D VA+K + EG +E + F +E
Sbjct: 4 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI---REGAMSEED-------FIEEA 53
Query: 106 AVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNR 165
V KL HP + + G + + + C+V E++ G L YL + +
Sbjct: 54 EVMMKLSHPKLVQLYGVCLEQAPI----------------CLVFEFMEHGCLSDYL-RTQ 96
Query: 166 RRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASN 225
R A + ++ + LD+ G++YL ++HRD+ N L+ +N+ +K++DFG+ R
Sbjct: 97 RGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD- 155
Query: 226 PNDMTGETGT---LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSEVT 281
+ T TGT + + +PEV + + Y+ K DV+SFG+ +WE++ +PY + S SEV
Sbjct: 156 -DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV 214
Query: 282 SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTS 332
+ R PR + + +M CW P+ RP ++ L I S
Sbjct: 215 ED-ISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 264
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 135 bits (339), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 98/313 (31%), Positives = 147/313 (46%), Gaps = 43/313 (13%)
Query: 38 LKKQRQDWEIEPSKLVI--KSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIA 95
L + Q I PS L++ VI RG FG V+ G LLD +G + +
Sbjct: 21 LVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHG---------TLLD--NDGKKIHCAVK 69
Query: 96 ALR--------SAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCV 147
+L S F E + HPNV +G + S P V
Sbjct: 70 SLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSE-----------GSP----LV 114
Query: 148 VVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDK 207
V+ Y+ G L+ + I+N K ++ L +A+G+ +L S+K VHRD+ N +LD+
Sbjct: 115 VLPYMKHGDLRNF-IRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDE 173
Query: 208 NRTVKIADFGVAR----VEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLW 263
TVK+ADFG+AR E + ++ TG + +MA E L + K DV+SFG+ LW
Sbjct: 174 KFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW 233
Query: 264 EIYCCDM-PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 322
E+ PYPD++ ++T ++ Q R P CP L VM +CW + RP E+
Sbjct: 234 ELMTRGAPPYPDVNTFDITVYLL-QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSEL 292
Query: 323 VSMLEAIDTSKGG 335
VS + AI ++ G
Sbjct: 293 VSRISAIFSTFIG 305
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 135 bits (339), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 97/313 (30%), Positives = 149/313 (47%), Gaps = 43/313 (13%)
Query: 38 LKKQRQDWEIEPSKLVI--KSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIA 95
L + Q I PS L++ VI RG FG V+ G LLD +G + +
Sbjct: 75 LVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHG---------TLLD--NDGKKIHCAVK 123
Query: 96 ALR--------SAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCV 147
+L S F E + HPNV +G + ++E + V
Sbjct: 124 SLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICL-------RSEGSPL--------V 168
Query: 148 VVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDK 207
V+ Y+ G L+ + I+N K ++ L +A+G+ +L S+K VHRD+ N +LD+
Sbjct: 169 VLPYMKHGDLRNF-IRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDE 227
Query: 208 NRTVKIADFGVAR----VEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLW 263
TVK+ADFG+AR E + ++ TG + +MA E L + K DV+SFG+ LW
Sbjct: 228 KFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW 287
Query: 264 EIYCCDM-PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 322
E+ PYPD++ ++T ++ Q R P CP L VM +CW + RP E+
Sbjct: 288 ELMTRGAPPYPDVNTFDITVYLL-QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSEL 346
Query: 323 VSMLEAIDTSKGG 335
VS + AI ++ G
Sbjct: 347 VSRISAIFSTFIG 359
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 134 bits (338), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 98/313 (31%), Positives = 147/313 (46%), Gaps = 43/313 (13%)
Query: 38 LKKQRQDWEIEPSKLVI--KSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIA 95
L + Q I PS L++ VI RG FG V+ G LLD +G + +
Sbjct: 17 LVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHG---------TLLD--NDGKKIHCAVK 65
Query: 96 ALR--------SAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCV 147
+L S F E + HPNV +G + S P V
Sbjct: 66 SLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSE-----------GSP----LV 110
Query: 148 VVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDK 207
V+ Y+ G L+ + I+N K ++ L +A+G+ +L S+K VHRD+ N +LD+
Sbjct: 111 VLPYMKHGDLRNF-IRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDE 169
Query: 208 NRTVKIADFGVAR----VEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLW 263
TVK+ADFG+AR E + ++ TG + +MA E L + K DV+SFG+ LW
Sbjct: 170 KFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW 229
Query: 264 EIYCCDM-PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 322
E+ PYPD++ ++T ++ Q R P CP L VM +CW + RP E+
Sbjct: 230 ELMTRGAPPYPDVNTFDITVYLL-QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSEL 288
Query: 323 VSMLEAIDTSKGG 335
VS + AI ++ G
Sbjct: 289 VSRISAIFSTFIG 301
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 134 bits (338), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 98/313 (31%), Positives = 147/313 (46%), Gaps = 43/313 (13%)
Query: 38 LKKQRQDWEIEPSKLVI--KSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIA 95
L + Q I PS L++ VI RG FG V+ G LLD +G + +
Sbjct: 16 LVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHG---------TLLD--NDGKKIHCAVK 64
Query: 96 ALR--------SAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCV 147
+L S F E + HPNV +G + S P V
Sbjct: 65 SLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSE-----------GSP----LV 109
Query: 148 VVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDK 207
V+ Y+ G L+ + I+N K ++ L +A+G+ +L S+K VHRD+ N +LD+
Sbjct: 110 VLPYMKHGDLRNF-IRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDE 168
Query: 208 NRTVKIADFGVAR----VEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLW 263
TVK+ADFG+AR E + ++ TG + +MA E L + K DV+SFG+ LW
Sbjct: 169 KFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW 228
Query: 264 EIYCCDM-PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 322
E+ PYPD++ ++T ++ Q R P CP L VM +CW + RP E+
Sbjct: 229 ELMTRGAPPYPDVNTFDITVYLL-QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSEL 287
Query: 323 VSMLEAIDTSKGG 335
VS + AI ++ G
Sbjct: 288 VSRISAIFSTFIG 300
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 134 bits (338), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 98/313 (31%), Positives = 147/313 (46%), Gaps = 43/313 (13%)
Query: 38 LKKQRQDWEIEPSKLVI--KSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIA 95
L + Q I PS L++ VI RG FG V+ G LLD +G + +
Sbjct: 16 LVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHG---------TLLD--NDGKKIHCAVK 64
Query: 96 ALR--------SAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCV 147
+L S F E + HPNV +G + S P V
Sbjct: 65 SLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSE-----------GSP----LV 109
Query: 148 VVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDK 207
V+ Y+ G L+ + I+N K ++ L +A+G+ +L S+K VHRD+ N +LD+
Sbjct: 110 VLPYMKHGDLRNF-IRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDE 168
Query: 208 NRTVKIADFGVAR----VEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLW 263
TVK+ADFG+AR E + ++ TG + +MA E L + K DV+SFG+ LW
Sbjct: 169 KFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW 228
Query: 264 EIYCCDM-PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 322
E+ PYPD++ ++T ++ Q R P CP L VM +CW + RP E+
Sbjct: 229 ELMTRGAPPYPDVNTFDITVYLL-QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSEL 287
Query: 323 VSMLEAIDTSKGG 335
VS + AI ++ G
Sbjct: 288 VSRISAIFSTFIG 300
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 134 bits (338), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 145/285 (50%), Gaps = 37/285 (12%)
Query: 58 IARGTFGTVHRG--LYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPN 115
I +G FG VH+G + D VA+K L G+ E E+ F +EV + L+HPN
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDS--EGETEMIEKFQEFQREVFIMSNLNHPN 84
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVV 175
+ K G + N +V+E++P G L L+ ++ + + V +
Sbjct: 85 IVKLYG------------------LMHNPPRMVMEFVPCGDLYHRLL-DKAHPIKWSVKL 125
Query: 176 QLALDLARGLSYLHSQK--IVHRDVKTENMLL---DKNRTV--KIADFGVARVEASNPND 228
+L LD+A G+ Y+ +Q IVHRD+++ N+ L D+N V K+ADFG+++ + +
Sbjct: 126 RLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ---QSVHS 182
Query: 229 MTGETGTLGYMAPEVLNGN--PYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEV--TSAV 284
++G G +MAPE + Y K D YSF + L+ I + P+ + S+ ++ + +
Sbjct: 183 VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMI 242
Query: 285 VRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAI 329
+ LRP IP CP L NV++ CW +P KRP +V L +
Sbjct: 243 REEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 134 bits (338), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 98/313 (31%), Positives = 147/313 (46%), Gaps = 43/313 (13%)
Query: 38 LKKQRQDWEIEPSKLVI--KSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIA 95
L + Q I PS L++ VI RG FG V+ G LLD +G + +
Sbjct: 14 LVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHG---------TLLD--NDGKKIHCAVK 62
Query: 96 ALR--------SAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCV 147
+L S F E + HPNV +G + S P V
Sbjct: 63 SLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSE-----------GSP----LV 107
Query: 148 VVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDK 207
V+ Y+ G L+ + I+N K ++ L +A+G+ +L S+K VHRD+ N +LD+
Sbjct: 108 VLPYMKHGDLRNF-IRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDE 166
Query: 208 NRTVKIADFGVAR----VEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLW 263
TVK+ADFG+AR E + ++ TG + +MA E L + K DV+SFG+ LW
Sbjct: 167 KFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW 226
Query: 264 EIYCCDM-PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 322
E+ PYPD++ ++T ++ Q R P CP L VM +CW + RP E+
Sbjct: 227 ELMTRGAPPYPDVNTFDITVYLL-QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSEL 285
Query: 323 VSMLEAIDTSKGG 335
VS + AI ++ G
Sbjct: 286 VSRISAIFSTFIG 298
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 134 bits (338), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 98/313 (31%), Positives = 147/313 (46%), Gaps = 43/313 (13%)
Query: 38 LKKQRQDWEIEPSKLVI--KSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIA 95
L + Q I PS L++ VI RG FG V+ G LLD +G + +
Sbjct: 17 LVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHG---------TLLD--NDGKKIHCAVK 65
Query: 96 ALR--------SAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCV 147
+L S F E + HPNV +G + S P V
Sbjct: 66 SLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSE-----------GSP----LV 110
Query: 148 VVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDK 207
V+ Y+ G L+ + I+N K ++ L +A+G+ +L S+K VHRD+ N +LD+
Sbjct: 111 VLPYMKHGDLRNF-IRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDE 169
Query: 208 NRTVKIADFGVAR----VEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLW 263
TVK+ADFG+AR E + ++ TG + +MA E L + K DV+SFG+ LW
Sbjct: 170 KFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW 229
Query: 264 EIYCCDM-PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 322
E+ PYPD++ ++T ++ Q R P CP L VM +CW + RP E+
Sbjct: 230 ELMTRGAPPYPDVNTFDITVYLL-QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSEL 288
Query: 323 VSMLEAIDTSKGG 335
VS + AI ++ G
Sbjct: 289 VSRISAIFSTFIG 301
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 134 bits (337), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 144/285 (50%), Gaps = 37/285 (12%)
Query: 58 IARGTFGTVHRG--LYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPN 115
I +G FG VH+G + D VA+K L G+ E E+ F +EV + L+HPN
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDS--EGETEMIEKFQEFQREVFIMSNLNHPN 84
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVV 175
+ K G + N +V+E++P G L L+ ++ + + V +
Sbjct: 85 IVKLYG------------------LMHNPPRMVMEFVPCGDLYHRLL-DKAHPIKWSVKL 125
Query: 176 QLALDLARGLSYLHSQK--IVHRDVKTENMLL---DKNRTV--KIADFGVARVEASNPND 228
+L LD+A G+ Y+ +Q IVHRD+++ N+ L D+N V K+ADFG ++ + +
Sbjct: 126 RLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ---QSVHS 182
Query: 229 MTGETGTLGYMAPEVLNGN--PYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEV--TSAV 284
++G G +MAPE + Y K D YSF + L+ I + P+ + S+ ++ + +
Sbjct: 183 VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMI 242
Query: 285 VRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAI 329
+ LRP IP CP L NV++ CW +P KRP +V L +
Sbjct: 243 REEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/316 (31%), Positives = 146/316 (46%), Gaps = 49/316 (15%)
Query: 47 IEPSKLVIKSVIARGTFG----TVHRGLYDGHDVAVK-LLDWGEEGHRTEAEIAALRSAF 101
PS L+ V+ +G FG HR G + +K L+ + EE RT F
Sbjct: 7 FRPSDLIHGEVLGKGCFGQAIKVTHRE--TGEVMVMKELIRFDEETQRT----------F 54
Query: 102 TQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYL 161
+EV V L+HPNV KFIG L+ + EY+ GG L+ +
Sbjct: 55 LKEVKVMRCLEHPNVLKFIGVLYKDKRLNF----------------ITEYIKGGTLRG-I 97
Query: 162 IKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARV 221
IK+ + + V A D+A G++YLHS I+HRD+ + N L+ +N+ V +ADFG+AR+
Sbjct: 98 IKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARL 157
Query: 222 ---EASNPNDMTG-----------ETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYC 267
E + P + G +MAPE++NG Y+ K DV+SFGI L EI
Sbjct: 158 MVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIG 217
Query: 268 CDMPYPDLSFSEVTSAV-VRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSML 326
PD + + VR L P CP S + RC D +P+KRP ++ L
Sbjct: 218 RVNADPDYLPRTMDFGLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWL 277
Query: 327 EAIDTSKGGGMIPGDQ 342
E + G + G Q
Sbjct: 278 ETLRMHLAGHLPLGPQ 293
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 132 bits (331), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 144/285 (50%), Gaps = 37/285 (12%)
Query: 58 IARGTFGTVHRG--LYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPN 115
I +G FG VH+G + D VA+K L G+ E E+ F +EV + L+HPN
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDS--EGETEMIEKFQEFQREVFIMSNLNHPN 84
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVV 175
+ K G + N +V+E++P G L L+ ++ + + V +
Sbjct: 85 IVKLYG------------------LMHNPPRMVMEFVPCGDLYHRLL-DKAHPIKWSVKL 125
Query: 176 QLALDLARGLSYLHSQK--IVHRDVKTENMLL---DKNRTV--KIADFGVARVEASNPND 228
+L LD+A G+ Y+ +Q IVHRD+++ N+ L D+N V K+ADF +++ + +
Sbjct: 126 RLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ---QSVHS 182
Query: 229 MTGETGTLGYMAPEVLNGN--PYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEV--TSAV 284
++G G +MAPE + Y K D YSF + L+ I + P+ + S+ ++ + +
Sbjct: 183 VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMI 242
Query: 285 VRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAI 329
+ LRP IP CP L NV++ CW +P KRP +V L +
Sbjct: 243 REEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 131 bits (329), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 143/294 (48%), Gaps = 34/294 (11%)
Query: 43 QDWEIEPSKLVIKSVIARGTFGTVHRGLYDGHD-----VAVKLLDWGEEGHRTEAEIAAL 97
+D+EI+ ++ + I G FG VH+G+Y + VA+K ++
Sbjct: 3 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCK--------NCTSDSV 54
Query: 98 RSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGAL 157
R F QE + DHP++ K IG + TEN +++E G L
Sbjct: 55 REKFLQEALTMRQFDHPHIVKLIG---------VITENP--------VWIIMELCTLGEL 97
Query: 158 KTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFG 217
+++L + R+ L ++ A L+ L+YL S++ VHRD+ N+L+ N VK+ DFG
Sbjct: 98 RSFL-QVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFG 156
Query: 218 VAR-VEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDM-PYPDL 275
++R +E S + + +MAPE +N + DV+ FG+C+WEI + P+ +
Sbjct: 157 LSRYMEDSTXXKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV 216
Query: 276 SFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAI 329
++V + P +P CP +L ++M +CW +P +RP E+ + L I
Sbjct: 217 KNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 130 bits (328), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 143/294 (48%), Gaps = 34/294 (11%)
Query: 43 QDWEIEPSKLVIKSVIARGTFGTVHRGLYDGHD-----VAVKLLDWGEEGHRTEAEIAAL 97
+D+EI+ ++ + I G FG VH+G+Y + VA+K ++
Sbjct: 31 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCK--------NCTSDSV 82
Query: 98 RSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGAL 157
R F QE + DHP++ K IG + TEN +++E G L
Sbjct: 83 REKFLQEALTMRQFDHPHIVKLIG---------VITENP--------VWIIMELCTLGEL 125
Query: 158 KTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFG 217
+++L + R+ L ++ A L+ L+YL S++ VHRD+ N+L+ N VK+ DFG
Sbjct: 126 RSFL-QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFG 184
Query: 218 VAR-VEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDM-PYPDL 275
++R +E S + + +MAPE +N + DV+ FG+C+WEI + P+ +
Sbjct: 185 LSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV 244
Query: 276 SFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAI 329
++V + P +P CP +L ++M +CW +P +RP E+ + L I
Sbjct: 245 KNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 297
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 130 bits (328), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 141/294 (47%), Gaps = 34/294 (11%)
Query: 43 QDWEIEPSKLVIKSVIARGTFGTVHRGLYDGHD-----VAVKLLDWGEEGHRTEAEIAAL 97
+D+EI+ ++ + I G FG VH+G+Y + VA+K ++
Sbjct: 6 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCK--------NCTSDSV 57
Query: 98 RSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGAL 157
R F QE + DHP++ K IG + N +++E G L
Sbjct: 58 REKFLQEALTMRQFDHPHIVKLIGV-----------------ITENPVWIIMELCTLGEL 100
Query: 158 KTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFG 217
+++L + R+ L ++ A L+ L+YL S++ VHRD+ N+L+ N VK+ DFG
Sbjct: 101 RSFL-QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFG 159
Query: 218 VAR-VEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDM-PYPDL 275
++R +E S + + +MAPE +N + DV+ FG+C+WEI + P+ +
Sbjct: 160 LSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV 219
Query: 276 SFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAI 329
++V + P +P CP +L ++M +CW +P +RP E+ + L I
Sbjct: 220 KNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 272
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 130 bits (328), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 141/294 (47%), Gaps = 34/294 (11%)
Query: 43 QDWEIEPSKLVIKSVIARGTFGTVHRGLYDGHD-----VAVKLLDWGEEGHRTEAEIAAL 97
+D+EI+ ++ + I G FG VH+G+Y + VA+K ++
Sbjct: 5 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCK--------NCTSDSV 56
Query: 98 RSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGAL 157
R F QE + DHP++ K IG + N +++E G L
Sbjct: 57 REKFLQEALTMRQFDHPHIVKLIGV-----------------ITENPVWIIMELCTLGEL 99
Query: 158 KTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFG 217
+++L + R+ L ++ A L+ L+YL S++ VHRD+ N+L+ N VK+ DFG
Sbjct: 100 RSFL-QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFG 158
Query: 218 VAR-VEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDM-PYPDL 275
++R +E S + + +MAPE +N + DV+ FG+C+WEI + P+ +
Sbjct: 159 LSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV 218
Query: 276 SFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAI 329
++V + P +P CP +L ++M +CW +P +RP E+ + L I
Sbjct: 219 KNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 271
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 143/294 (48%), Gaps = 34/294 (11%)
Query: 43 QDWEIEPSKLVIKSVIARGTFGTVHRGLYDGHD-----VAVKLLDWGEEGHRTEAEIAAL 97
+D+EI+ ++ + I G FG VH+G+Y + VA+K ++
Sbjct: 8 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCK--------NCTSDSV 59
Query: 98 RSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGAL 157
R F QE + DHP++ K IG + TEN +++E G L
Sbjct: 60 REKFLQEALTMRQFDHPHIVKLIG---------VITENP--------VWIIMELCTLGEL 102
Query: 158 KTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFG 217
+++L + R+ L ++ A L+ L+YL S++ VHRD+ N+L+ N VK+ DFG
Sbjct: 103 RSFL-QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFG 161
Query: 218 VAR-VEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDM-PYPDL 275
++R +E S + + +MAPE +N + DV+ FG+C+WEI + P+ +
Sbjct: 162 LSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV 221
Query: 276 SFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAI 329
++V + P +P CP +L ++M +CW +P +RP E+ + L I
Sbjct: 222 KNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 274
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 143/294 (48%), Gaps = 34/294 (11%)
Query: 43 QDWEIEPSKLVIKSVIARGTFGTVHRGLYDGHD-----VAVKLLDWGEEGHRTEAEIAAL 97
+D+EI+ ++ + I G FG VH+G+Y + VA+K ++
Sbjct: 3 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCK--------NCTSDSV 54
Query: 98 RSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGAL 157
R F QE + DHP++ K IG + TEN +++E G L
Sbjct: 55 REKFLQEALTMRQFDHPHIVKLIG---------VITENP--------VWIIMELCTLGEL 97
Query: 158 KTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFG 217
+++L + R+ L ++ A L+ L+YL S++ VHRD+ N+L+ N VK+ DFG
Sbjct: 98 RSFL-QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFG 156
Query: 218 VAR-VEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDM-PYPDL 275
++R +E S + + +MAPE +N + DV+ FG+C+WEI + P+ +
Sbjct: 157 LSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV 216
Query: 276 SFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAI 329
++V + P +P CP +L ++M +CW +P +RP E+ + L I
Sbjct: 217 KNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 144/306 (47%), Gaps = 34/306 (11%)
Query: 31 IGKASNFLKKQRQDWEIEPSKLVIKSVIARGTFGTVHRGLYDGHD-----VAVKLLDWGE 85
I + + +D+EI+ ++ + I G FG VH+G+Y + VA+K
Sbjct: 371 IDEEDTYTMPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCK--- 427
Query: 86 EGHRTEAEIAALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNIC 145
++R F QE + DHP++ K IG + N
Sbjct: 428 -----NCTSDSVREKFLQEALTMRQFDHPHIVKLIGV-----------------ITENPV 465
Query: 146 CVVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLL 205
+++E G L+++L + R+ L ++ A L+ L+YL S++ VHRD+ N+L+
Sbjct: 466 WIIMELCTLGELRSFL-QVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV 524
Query: 206 DKNRTVKIADFGVAR-VEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWE 264
N VK+ DFG++R +E S + + +MAPE +N + DV+ FG+C+WE
Sbjct: 525 SSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWE 584
Query: 265 IYCCDM-PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
I + P+ + ++V + P +P CP +L ++M +CW +P +RP E+
Sbjct: 585 ILMHGVKPFQGVKNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTELK 643
Query: 324 SMLEAI 329
+ L I
Sbjct: 644 AQLSTI 649
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 143/294 (48%), Gaps = 34/294 (11%)
Query: 43 QDWEIEPSKLVIKSVIARGTFGTVHRGLYDGHD-----VAVKLLDWGEEGHRTEAEIAAL 97
+D+EI+ ++ + I G FG VH+G+Y + VA+K ++
Sbjct: 3 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCK--------NCTSDSV 54
Query: 98 RSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGAL 157
R F QE + DHP++ K IG + TEN +++E G L
Sbjct: 55 REKFLQEALTMRQFDHPHIVKLIG---------VITENP--------VWIIMELCTLGEL 97
Query: 158 KTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFG 217
+++L + R+ L ++ A L+ L+YL S++ VHRD+ N+L+ N VK+ DFG
Sbjct: 98 RSFL-QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFG 156
Query: 218 VAR-VEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDM-PYPDL 275
++R +E S + + +MAPE +N + DV+ FG+C+WEI + P+ +
Sbjct: 157 LSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV 216
Query: 276 SFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAI 329
++V + P +P CP +L ++M +CW +P +RP E+ + L I
Sbjct: 217 KNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 140/287 (48%), Gaps = 31/287 (10%)
Query: 46 EIEPSKLVIKSVIARGTFGTVHRGLYDG-HDVAVKLLDWGEEGHRTEAEIAALRSAFTQE 104
E++ ++ + + G FG V G + G +DVAVK++ +EG +E E F QE
Sbjct: 4 ELKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMI---KEGSMSEDE-------FFQE 53
Query: 105 VAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKN 164
KL HP + KF G ++I V EY+ G L YL ++
Sbjct: 54 AQTMMKLSHPKLVKFYGVCSKEYPIYI----------------VTEYISNGCLLNYL-RS 96
Query: 165 RRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEAS 224
+ L ++++ D+ G+++L S + +HRD+ N L+D++ VK++DFG+ R
Sbjct: 97 HGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLD 156
Query: 225 NPN-DMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTS 282
+ G + + APEV + Y+ K DV++FGI +WE++ MPY + SEV
Sbjct: 157 DQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVL 216
Query: 283 AVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAI 329
V Q R P ++ +M CW P+KRP +++S +E +
Sbjct: 217 K-VSQGHRLYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPL 262
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 142/293 (48%), Gaps = 34/293 (11%)
Query: 44 DWEIEPSKLVIKSVIARGTFGTVHRGLYDGHD-----VAVKLLDWGEEGHRTEAEIAALR 98
D+EI+ ++ + I G FG VH+G+Y + VA+K ++R
Sbjct: 1 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCK--------NCTSDSVR 52
Query: 99 SAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALK 158
F QE + DHP++ K IG + TEN +++E G L+
Sbjct: 53 EKFLQEALTMRQFDHPHIVKLIG---------VITENP--------VWIIMELCTLGELR 95
Query: 159 TYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGV 218
++L + R+ L ++ A L+ L+YL S++ VHRD+ N+L+ N VK+ DFG+
Sbjct: 96 SFL-QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGL 154
Query: 219 AR-VEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDM-PYPDLS 276
+R +E S + + +MAPE +N + DV+ FG+C+WEI + P+ +
Sbjct: 155 SRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK 214
Query: 277 FSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAI 329
++V + P +P CP +L ++M +CW +P +RP E+ + L I
Sbjct: 215 NNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 266
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 128 bits (321), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 144/296 (48%), Gaps = 39/296 (13%)
Query: 46 EIEPSKLVIKSVIARGTFGTVHRGLYDGHD-----VAVKLLDWGEEGHRTEAEIAALRSA 100
EI+ S + I+ VI G FG V RG VA+K L +G TE + R
Sbjct: 12 EIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTL----KGGYTERQ----RRE 63
Query: 101 FTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTY 160
F E ++ + +HPN+ + G S MP ++ E++ GAL ++
Sbjct: 64 FLSEASIMGQFEHPNIIRLEGVVTNS-------------MP---VMILTEFMENGALDSF 107
Query: 161 LIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR 220
L N + ++V L +A G+ YL VHRD+ N+L++ N K++DFG++R
Sbjct: 108 LRLNDGQFTVIQLVGMLR-GIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSR 166
Query: 221 VEASNPNDMTGETGTLG------YMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYP 273
N +D T ET +LG + APE + + D +S+GI +WE+ + PY
Sbjct: 167 FLEENSSDPT-ETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYW 225
Query: 274 DLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAI 329
D+S +V +A + Q+ R P CP+SL +M CW + + RP +VVS L+ +
Sbjct: 226 DMSNQDVINA-IEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKM 280
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 128 bits (321), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 143/306 (46%), Gaps = 34/306 (11%)
Query: 31 IGKASNFLKKQRQDWEIEPSKLVIKSVIARGTFGTVHRGLYDGHD-----VAVKLLDWGE 85
I + + +D+EI+ ++ + I G FG VH+G+Y + VA+K
Sbjct: 371 IDEEDTYTMPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCK--- 427
Query: 86 EGHRTEAEIAALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNIC 145
++R F QE + DHP++ K IG + N
Sbjct: 428 -----NCTSDSVREKFLQEALTMRQFDHPHIVKLIGV-----------------ITENPV 465
Query: 146 CVVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLL 205
+++E G L+++L + R+ L ++ A L+ L+YL S++ VHRD+ N+L+
Sbjct: 466 WIIMELCTLGELRSFL-QVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV 524
Query: 206 DKNRTVKIADFGVAR-VEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWE 264
VK+ DFG++R +E S + + +MAPE +N + DV+ FG+C+WE
Sbjct: 525 SATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWE 584
Query: 265 IYCCDM-PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
I + P+ + ++V + P +P CP +L ++M +CW +P +RP E+
Sbjct: 585 ILMHGVKPFQGVKNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTELK 643
Query: 324 SMLEAI 329
+ L I
Sbjct: 644 AQLSTI 649
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 127 bits (320), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 136/297 (45%), Gaps = 35/297 (11%)
Query: 41 QRQDWEIEPSKLVIKSVIARGTFGTVHRGLYDGH-DVAVKLLDWGEEGHRTEAEIAALRS 99
++ WEI L ++ + G FG V Y+ H VAVK + G +
Sbjct: 179 EKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG----------SMSVE 228
Query: 100 AFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKT 159
AF E V L H + K LH + ++ E++ G+L
Sbjct: 229 AFLAEANVMKTLQHDKLVK----------LH-------AVVTKEPIYIITEFMAKGSLLD 271
Query: 160 YLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVA 219
+L + K ++ + +A G++++ + +HRD++ N+L+ + KIADFG+A
Sbjct: 272 FLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLA 331
Query: 220 RVEASNPNDMTGETGT---LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCD-MPYPDL 275
RV N+ T G + + APE +N + K DV+SFGI L EI +PYP +
Sbjct: 332 RV--IEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGM 389
Query: 276 SFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTS 332
S EV A+ R P P CP L N+M RCW P++RP + + S+L+ T+
Sbjct: 390 SNPEVIRALERGYRMPR-PENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTA 445
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 127 bits (320), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 142/294 (48%), Gaps = 34/294 (11%)
Query: 43 QDWEIEPSKLVIKSVIARGTFGTVHRGLYDGHD-----VAVKLLDWGEEGHRTEAEIAAL 97
+D+EI+ ++ + I G FG VH+G+Y + VA+K ++
Sbjct: 3 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCK--------NCTSDSV 54
Query: 98 RSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGAL 157
R F QE + DHP++ K IG + TEN +++E G L
Sbjct: 55 REKFLQEALTMRQFDHPHIVKLIG---------VITENP--------VWIIMELCTLGEL 97
Query: 158 KTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFG 217
+++L + R+ L ++ A L+ L+YL S++ VHRD+ N+L+ VK+ DFG
Sbjct: 98 RSFL-QVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFG 156
Query: 218 VAR-VEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDM-PYPDL 275
++R +E S + + +MAPE +N + DV+ FG+C+WEI + P+ +
Sbjct: 157 LSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV 216
Query: 276 SFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAI 329
++V + P +P CP +L ++M +CW +P +RP E+ + L I
Sbjct: 217 KNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 127 bits (319), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 134/294 (45%), Gaps = 39/294 (13%)
Query: 41 QRQDWEIEPSKLVIKSVIARGTFGTVHRGLYDGH-DVAVKLLDWGEEGHRTEAEIAALRS 99
++ WEI L ++ + G FG V Y+ H VAVK + G +
Sbjct: 173 EKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG----------SMSVE 222
Query: 100 AFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKT 159
AF E V L H + K LH + ++ E++ G+L
Sbjct: 223 AFLAEANVMKTLQHDKLVK----------LH-------AVVTKEPIYIITEFMAKGSLLD 265
Query: 160 YLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVA 219
+L + K ++ + +A G++++ + +HRD++ N+L+ + KIADFG+A
Sbjct: 266 FLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLA 325
Query: 220 RVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCD-MPYPDLSFS 278
RV A P + + APE +N + K DV+SFGI L EI +PYP +S
Sbjct: 326 RVGAKFP---------IKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP 376
Query: 279 EVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTS 332
EV A+ R P P CP L N+M RCW P++RP + + S+L+ T+
Sbjct: 377 EVIRALERGYRMPR-PENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTA 429
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 137/295 (46%), Gaps = 35/295 (11%)
Query: 41 QRQDWEIEPSKLVIKSVIARGTFGTVHRGLYDGH-DVAVKLLDWGEEGHRTEAEIAALRS 99
++ WEI L ++ + G FG V Y+ H VAVK + G +
Sbjct: 6 EKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG----------SMSVE 55
Query: 100 AFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKT 159
AF E V L H + K + A + ++I + E++ G+L
Sbjct: 56 AFLAEANVMKTLQHDKLVK-LHAVVTKEPIYI----------------ITEFMAKGSLLD 98
Query: 160 YLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVA 219
+L + K ++ + +A G++++ + +HRD++ N+L+ + KIADFG+A
Sbjct: 99 FLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLA 158
Query: 220 RVEASNPNDMTGETGT---LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCD-MPYPDL 275
RV N+ T G + + APE +N + K DV+SFGI L EI +PYP +
Sbjct: 159 RV--IEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGM 216
Query: 276 SFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAID 330
S EV A+ R P P CP L N+M RCW P++RP + + S+L+ +
Sbjct: 217 SNPEVIRALERGYRMPR-PENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFE 270
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 138/299 (46%), Gaps = 31/299 (10%)
Query: 44 DWEIEPSKLVIKSVIARGTFGTVHRGLYDGH-DVAVKLLDWGEEGHRTEAEIAALRSAFT 102
+WE+ L + + G FG V G Y+GH VAVK L G + AF
Sbjct: 16 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG----------SMSPDAFL 65
Query: 103 QEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLI 162
E + +L H + + + A + ++I + EY+ G+L +L
Sbjct: 66 AEANLMKQLQHQRLVR-LYAVVTQEPIYI----------------ITEYMENGSLVDFLK 108
Query: 163 KNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR-V 221
KL ++ +A +A G++++ + +HRD++ N+L+ + KIADFG+AR +
Sbjct: 109 TPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLI 168
Query: 222 EASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSEV 280
E + G + + APE +N + K DV+SFGI L EI +PYP ++ EV
Sbjct: 169 EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 228
Query: 281 TSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTSKGGGMIP 339
+ R R P CP L +M+ CW P+ RP D + S+LE T+ G P
Sbjct: 229 IQNLER-GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEGQFQP 286
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 137/299 (45%), Gaps = 31/299 (10%)
Query: 44 DWEIEPSKLVIKSVIARGTFGTVHRGLYDGH-DVAVKLLDWGEEGHRTEAEIAALRSAFT 102
+WE+ L + + G FG V G Y+GH VAVK L G + AF
Sbjct: 15 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG----------SMSPDAFL 64
Query: 103 QEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLI 162
E + +L H + + A + ++I + EY+ G+L +L
Sbjct: 65 AEANLMKQLQHQRLVRLY-AVVTQEPIYI----------------ITEYMENGSLVDFLK 107
Query: 163 KNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR-V 221
KL ++ +A +A G++++ + +HRD++ N+L+ + KIADFG+AR +
Sbjct: 108 TPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLI 167
Query: 222 EASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSEV 280
E + G + + APE +N + K DV+SFGI L EI +PYP ++ EV
Sbjct: 168 EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 227
Query: 281 TSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTSKGGGMIP 339
+ R R P CP L +M+ CW P+ RP D + S+LE T+ G P
Sbjct: 228 IQNLER-GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEGQYQP 285
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 137/299 (45%), Gaps = 31/299 (10%)
Query: 44 DWEIEPSKLVIKSVIARGTFGTVHRGLYDGH-DVAVKLLDWGEEGHRTEAEIAALRSAFT 102
+WE+ L + + G FG V G Y+GH VAVK L G + AF
Sbjct: 13 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG----------SMSPDAFL 62
Query: 103 QEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLI 162
E + +L H + + A + ++I + EY+ G+L +L
Sbjct: 63 AEANLMKQLQHQRLVRLY-AVVTQEPIYI----------------ITEYMENGSLVDFLK 105
Query: 163 KNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR-V 221
KL ++ +A +A G++++ + +HRD++ N+L+ + KIADFG+AR +
Sbjct: 106 TPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLI 165
Query: 222 EASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSEV 280
E + G + + APE +N + K DV+SFGI L EI +PYP ++ EV
Sbjct: 166 EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 225
Query: 281 TSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTSKGGGMIP 339
+ R R P CP L +M+ CW P+ RP D + S+LE T+ G P
Sbjct: 226 IQNLER-GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEGQYQP 283
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 137/299 (45%), Gaps = 31/299 (10%)
Query: 44 DWEIEPSKLVIKSVIARGTFGTVHRGLYDGH-DVAVKLLDWGEEGHRTEAEIAALRSAFT 102
+WE+ L + + G FG V G Y+GH VAVK L G + AF
Sbjct: 7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG----------SMSPDAFL 56
Query: 103 QEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLI 162
E + +L H + + A + ++I + EY+ G+L +L
Sbjct: 57 AEANLMKQLQHQRLVRLY-AVVTQEPIYI----------------ITEYMENGSLVDFLK 99
Query: 163 KNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR-V 221
KL ++ +A +A G++++ + +HRD++ N+L+ + KIADFG+AR +
Sbjct: 100 TPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLI 159
Query: 222 EASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSEV 280
E + G + + APE +N + K DV+SFGI L EI +PYP ++ EV
Sbjct: 160 EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 219
Query: 281 TSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTSKGGGMIP 339
+ R R P CP L +M+ CW P+ RP D + S+LE T+ G P
Sbjct: 220 IQNLER-GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEGQYQP 277
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 133/299 (44%), Gaps = 31/299 (10%)
Query: 44 DWEIEPSKLVIKSVIARGTFGTVHRGLYDGH-DVAVKLLDWGEEGHRTEAEIAALRSAFT 102
+WE+ L + + G FG V G Y+GH VAVK L G + AF
Sbjct: 17 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG----------SMSPDAFL 66
Query: 103 QEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLI 162
E + +L H + + ++ EY+ G+L +L
Sbjct: 67 AEANLMKQLQHQRLVRLYAVVTQEP-----------------IYIITEYMENGSLVDFLK 109
Query: 163 KNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR-V 221
KL ++ +A +A G++++ + +HRD++ N+L+ + KIADFG+AR +
Sbjct: 110 TPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLI 169
Query: 222 EASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSEV 280
E + G + + APE +N + K DV+SFGI L EI +PYP ++ EV
Sbjct: 170 EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 229
Query: 281 TSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTSKGGGMIP 339
+ R R P CP L +M+ CW P+ RP D + S+LE T+ G P
Sbjct: 230 IQNLER-GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEGQYQP 287
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/293 (30%), Positives = 138/293 (47%), Gaps = 35/293 (11%)
Query: 46 EIEPSKLVIKSVIARGTFGTVHRGLYD-----GHDVAVKLLDWGEEGHRTEAEIAALRSA 100
EIE S + I+ VI G FG V G VA+K L G TE + R
Sbjct: 18 EIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVG----YTEKQ----RRD 69
Query: 101 FTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTY 160
F E ++ + DHPN+ G V S +V EY+ G+L T+
Sbjct: 70 FLGEASIMGQFDHPNIIHLEG----------------VVTKSKPVMIVTEYMENGSLDTF 113
Query: 161 LIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR 220
L KN + ++V L ++ G+ YL VHRD+ N+L++ N K++DFG++R
Sbjct: 114 LKKNDGQFTVIQLVGMLR-GISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSR 172
Query: 221 VEASNPNDMTGETG---TLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYPDLS 276
V +P G + + APE + + DV+S+GI +WE+ + PY +++
Sbjct: 173 VLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMT 232
Query: 277 FSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAI 329
+V A V + R P CP++L +M CW + RP+ DE+V+ML+ +
Sbjct: 233 NQDVIKA-VEEGYRLPSPMDCPAALYQLMLDCWQKERNSRPKFDEIVNMLDKL 284
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 143/296 (48%), Gaps = 39/296 (13%)
Query: 46 EIEPSKLVIKSVIARGTFGTVHRGLYDGHD-----VAVKLLDWGEEGHRTEAEIAALRSA 100
EI+ S + I+ VI G FG V RG VA+K L +G TE + R
Sbjct: 10 EIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTL----KGGYTERQ----RRE 61
Query: 101 FTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTY 160
F E ++ + +HPN+ + G S MP ++ E++ GAL ++
Sbjct: 62 FLSEASIMGQFEHPNIIRLEGVVTNS-------------MP---VMILTEFMENGALDSF 105
Query: 161 LIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR 220
L N + ++V L +A G+ YL VHRD+ N+L++ N K++DFG++R
Sbjct: 106 LRLNDGQFTVIQLVGMLR-GIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSR 164
Query: 221 VEASNPNDMTGETGTLG------YMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYP 273
N +D T T +LG + APE + + D +S+GI +WE+ + PY
Sbjct: 165 FLEENSSDPT-YTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYW 223
Query: 274 DLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAI 329
D+S +V +A + Q+ R P CP+SL +M CW + + RP +VVS L+ +
Sbjct: 224 DMSNQDVINA-IEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKM 278
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 136/290 (46%), Gaps = 32/290 (11%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDG-HDVAVKLLDWGEEGHRTEAEIAALRSAFTQ 103
WEI+P L + G FG V G + G +DVA+K++ +EG +E E F +
Sbjct: 19 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMI---KEGSMSEDE-------FIE 68
Query: 104 EVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIK 163
E V L H + + G V ++ EY+ G L YL +
Sbjct: 69 EAKVMMNLSHEKLVQLYG----------------VCTKQRPIFIITEYMANGCLLNYL-R 111
Query: 164 NRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR-VE 222
R + + ++++ D+ + YL S++ +HRD+ N L++ VK++DFG++R V
Sbjct: 112 EMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL 171
Query: 223 ASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVT 281
G + + PEVL + ++ K D+++FG+ +WEIY MPY + SE T
Sbjct: 172 DDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE-T 230
Query: 282 SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVS-MLEAID 330
+ + Q LR P + +M CW D+RP ++S +L+ +D
Sbjct: 231 AEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 280
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 142/314 (45%), Gaps = 52/314 (16%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHD---------VAVKLLDWGEEGHRTEAEIA 95
WE KL + + G FG V G D VAVK+L + TE +++
Sbjct: 30 WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML----KDDATEKDLS 85
Query: 96 ALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGG 155
L S + H N+ +GA L+ V+VEY G
Sbjct: 86 DLVSEMEMMKMIGK---HKNIINLLGACTQDGPLY----------------VIVEYASKG 126
Query: 156 ALKTYLIKNR--------------RRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTE 201
L+ YL R ++ FK +V LARG+ YL SQK +HRD+
Sbjct: 127 NLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAAR 186
Query: 202 NMLLDKNRTVKIADFGVARVEASNPNDMTGETG---TLGYMAPEVLNGNPYNRKCDVYSF 258
N+L+ +N +KIADFG+AR + +N + T + +MAPE L Y + DV+SF
Sbjct: 187 NVLVTENNVMKIADFGLAR-DINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 259 GICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRP 317
G+ +WEI+ PYP + E+ ++++ R + P C + L +M+ CW A P +RP
Sbjct: 246 GVLMWEIFTLGGSPYPGIPVEELFK-LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRP 304
Query: 318 EMDEVVSMLEAIDT 331
++V L+ I T
Sbjct: 305 TFKQLVEDLDRILT 318
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 142/314 (45%), Gaps = 52/314 (16%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHD---------VAVKLLDWGEEGHRTEAEIA 95
WE KL + + G FG V G D VAVK+L + TE +++
Sbjct: 30 WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML----KDDATEKDLS 85
Query: 96 ALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGG 155
L S + H N+ +GA L+ V+VEY G
Sbjct: 86 DLVSEMEMMKMIGK---HKNIINLLGACTQDGPLY----------------VIVEYASKG 126
Query: 156 ALKTYLIKNR--------------RRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTE 201
L+ YL R ++ FK +V LARG+ YL SQK +HRD+
Sbjct: 127 NLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAAR 186
Query: 202 NMLLDKNRTVKIADFGVARVEASNPNDMTGETG---TLGYMAPEVLNGNPYNRKCDVYSF 258
N+L+ +N +KIADFG+AR + +N + T + +MAPE L Y + DV+SF
Sbjct: 187 NVLVTENNVMKIADFGLAR-DINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 259 GICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRP 317
G+ +WEI+ PYP + E+ ++++ R + P C + L +M+ CW A P +RP
Sbjct: 246 GVLMWEIFTLGGSPYPGIPVEELFK-LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRP 304
Query: 318 EMDEVVSMLEAIDT 331
++V L+ I T
Sbjct: 305 TFKQLVEDLDRILT 318
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 138/295 (46%), Gaps = 32/295 (10%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDG-HDVAVKLLDWGEEGHRTEAEIAALRSAFTQ 103
WEI+P L + G FG V G + G +DVA+K++ +EG +E E F +
Sbjct: 4 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMI---KEGSMSEDE-------FIE 53
Query: 104 EVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIK 163
E V L H + + G V ++ EY+ G L YL +
Sbjct: 54 EAKVMMNLSHEKLVQLYG----------------VCTKQRPIFIITEYMANGCLLNYL-R 96
Query: 164 NRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR-VE 222
R + + ++++ D+ + YL S++ +HRD+ N L++ VK++DFG++R V
Sbjct: 97 EMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL 156
Query: 223 ASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVT 281
G + + PEVL + ++ K D+++FG+ +WEIY MPY + SE T
Sbjct: 157 DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE-T 215
Query: 282 SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVS-MLEAIDTSKGG 335
+ + Q LR P + +M CW D+RP ++S +L+ +D + G
Sbjct: 216 AEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDENLYG 270
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 125 bits (313), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 142/314 (45%), Gaps = 52/314 (16%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHD---------VAVKLLDWGEEGHRTEAEIA 95
WE KL + + G FG V G D VAVK+L + TE +++
Sbjct: 30 WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML----KDDATEKDLS 85
Query: 96 ALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGG 155
L S + H N+ +GA L+ V+VEY G
Sbjct: 86 DLVSEMEMMKMIGK---HKNIINLLGACTQDGPLY----------------VIVEYASKG 126
Query: 156 ALKTYLIKNR--------------RRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTE 201
L+ YL R ++ FK +V LARG+ YL SQK +HRD+
Sbjct: 127 NLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAAR 186
Query: 202 NMLLDKNRTVKIADFGVARVEASNPNDMTGETG---TLGYMAPEVLNGNPYNRKCDVYSF 258
N+L+ +N +KIADFG+AR + +N + T + +MAPE L Y + DV+SF
Sbjct: 187 NVLVTENNVMKIADFGLAR-DINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 259 GICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRP 317
G+ +WEI+ PYP + E+ ++++ R + P C + L +M+ CW A P +RP
Sbjct: 246 GVLMWEIFTLGGSPYPGIPVEELFK-LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRP 304
Query: 318 EMDEVVSMLEAIDT 331
++V L+ I T
Sbjct: 305 TFKQLVEDLDRILT 318
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 125 bits (313), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 136/290 (46%), Gaps = 32/290 (11%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDG-HDVAVKLLDWGEEGHRTEAEIAALRSAFTQ 103
WEI+P L + G FG V G + G +DVA+K++ +EG +E E F +
Sbjct: 10 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMI---KEGSMSEDE-------FIE 59
Query: 104 EVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIK 163
E V L H + + G V ++ EY+ G L YL +
Sbjct: 60 EAKVMMNLSHEKLVQLYG----------------VCTKQRPIFIITEYMANGCLLNYL-R 102
Query: 164 NRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR-VE 222
R + + ++++ D+ + YL S++ +HRD+ N L++ VK++DFG++R V
Sbjct: 103 EMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL 162
Query: 223 ASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVT 281
G + + PEVL + ++ K D+++FG+ +WEIY MPY + SE T
Sbjct: 163 DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE-T 221
Query: 282 SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVS-MLEAID 330
+ + Q LR P + +M CW D+RP ++S +L+ +D
Sbjct: 222 AEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 271
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 125 bits (313), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 136/290 (46%), Gaps = 32/290 (11%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDG-HDVAVKLLDWGEEGHRTEAEIAALRSAFTQ 103
WEI+P L + G FG V G + G +DVA+K++ +EG +E E F +
Sbjct: 3 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMI---KEGSMSEDE-------FIE 52
Query: 104 EVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIK 163
E V L H + + G V ++ EY+ G L YL +
Sbjct: 53 EAKVMMNLSHEKLVQLYG----------------VCTKQRPIFIITEYMANGCLLNYL-R 95
Query: 164 NRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR-VE 222
R + + ++++ D+ + YL S++ +HRD+ N L++ VK++DFG++R V
Sbjct: 96 EMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL 155
Query: 223 ASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVT 281
G + + PEVL + ++ K D+++FG+ +WEIY MPY + SE T
Sbjct: 156 DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE-T 214
Query: 282 SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVS-MLEAID 330
+ + Q LR P + +M CW D+RP ++S +L+ +D
Sbjct: 215 AEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 264
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 125 bits (313), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 136/290 (46%), Gaps = 32/290 (11%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDG-HDVAVKLLDWGEEGHRTEAEIAALRSAFTQ 103
WEI+P L + G FG V G + G +DVA+K++ +EG +E E F +
Sbjct: 19 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMI---KEGSMSEDE-------FIE 68
Query: 104 EVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIK 163
E V L H + + G V ++ EY+ G L YL +
Sbjct: 69 EAKVMMNLSHEKLVQLYG----------------VCTKQRPIFIITEYMANGCLLNYL-R 111
Query: 164 NRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR-VE 222
R + + ++++ D+ + YL S++ +HRD+ N L++ VK++DFG++R V
Sbjct: 112 EMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL 171
Query: 223 ASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVT 281
G + + PEVL + ++ K D+++FG+ +WEIY MPY + SE T
Sbjct: 172 DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE-T 230
Query: 282 SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVS-MLEAID 330
+ + Q LR P + +M CW D+RP ++S +L+ +D
Sbjct: 231 AEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 280
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 124 bits (312), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 144/293 (49%), Gaps = 35/293 (11%)
Query: 46 EIEPSKLVIKSVIARGTFGTVHRG---LYDGHDV--AVKLLDWGEEGHRTEAEIAALRSA 100
EIE S++ I+ +I G G V G + DV A+K L G TE + R
Sbjct: 45 EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY----TERQ----RRD 96
Query: 101 FTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTY 160
F E ++ + DHPN+ + G G++AM +V EY+ G+L T+
Sbjct: 97 FLSEASIMGQFDHPNIIRLEGVVT----------RGRLAM------IVTEYMENGSLDTF 140
Query: 161 LIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR 220
L + + +V + + G+ YL VHRD+ N+L+D N K++DFG++R
Sbjct: 141 L-RTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSR 199
Query: 221 VEASNPNDMTGETG---TLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYPDLS 276
V +P+ TG + + APE + ++ DV+SFG+ +WE+ + PY +++
Sbjct: 200 VLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMT 259
Query: 277 FSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAI 329
+V S+ V + R P CP +L +M CW + +RP ++VS+L+A+
Sbjct: 260 NRDVISS-VEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDAL 311
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 124 bits (312), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 142/314 (45%), Gaps = 52/314 (16%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHD---------VAVKLLDWGEEGHRTEAEIA 95
WE KL + + G FG V G D VAVK+L + TE +++
Sbjct: 30 WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML----KDDATEEDLS 85
Query: 96 ALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGG 155
L S + H N+ +GA L+ V+VEY G
Sbjct: 86 DLVSEMEMMKMIGK---HKNIINLLGACTQDGPLY----------------VIVEYASKG 126
Query: 156 ALKTYLIKNR--------------RRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTE 201
L+ YL R ++ FK +V LARG+ YL SQK +HRD+
Sbjct: 127 NLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAAR 186
Query: 202 NMLLDKNRTVKIADFGVARVEASNPNDMTGETG---TLGYMAPEVLNGNPYNRKCDVYSF 258
N+L+ +N +KIADFG+AR + +N + T + +MAPE L Y + DV+SF
Sbjct: 187 NVLVTENNVMKIADFGLAR-DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 259 GICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRP 317
G+ +WEI+ PYP + E+ ++++ R + P C + L +M+ CW A P +RP
Sbjct: 246 GVLMWEIFTLGGSPYPGIPVEELFK-LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRP 304
Query: 318 EMDEVVSMLEAIDT 331
++V L+ I T
Sbjct: 305 TFKQLVEDLDRILT 318
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 124 bits (312), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 142/314 (45%), Gaps = 52/314 (16%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHD---------VAVKLLDWGEEGHRTEAEIA 95
WE KL + + G FG V G D VAVK+L + TE +++
Sbjct: 30 WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML----KDDATEKDLS 85
Query: 96 ALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGG 155
L S + H N+ +GA L+ V+VEY G
Sbjct: 86 DLVSEMEMMKMIGK---HKNIITLLGACTQDGPLY----------------VIVEYASKG 126
Query: 156 ALKTYLIKNR--------------RRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTE 201
L+ YL R ++ FK +V LARG+ YL SQK +HRD+
Sbjct: 127 NLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAAR 186
Query: 202 NMLLDKNRTVKIADFGVARVEASNPNDMTGETG---TLGYMAPEVLNGNPYNRKCDVYSF 258
N+L+ +N +KIADFG+AR + +N + T + +MAPE L Y + DV+SF
Sbjct: 187 NVLVTENNVMKIADFGLAR-DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 259 GICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRP 317
G+ +WEI+ PYP + E+ ++++ R + P C + L +M+ CW A P +RP
Sbjct: 246 GVLMWEIFTLGGSPYPGIPVEELFK-LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRP 304
Query: 318 EMDEVVSMLEAIDT 331
++V L+ I T
Sbjct: 305 TFKQLVEDLDRILT 318
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 124 bits (311), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 144/293 (49%), Gaps = 35/293 (11%)
Query: 46 EIEPSKLVIKSVIARGTFGTVHRG---LYDGHDV--AVKLLDWGEEGHRTEAEIAALRSA 100
EIE S++ I+ +I G G V G + DV A+K L G TE + R
Sbjct: 45 EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY----TERQ----RRD 96
Query: 101 FTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTY 160
F E ++ + DHPN+ + G G++AM +V EY+ G+L T+
Sbjct: 97 FLSEASIMGQFDHPNIIRLEGVVT----------RGRLAM------IVTEYMENGSLDTF 140
Query: 161 LIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR 220
L + + +V + + G+ YL VHRD+ N+L+D N K++DFG++R
Sbjct: 141 L-RTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSR 199
Query: 221 VEASNPNDMTGETG---TLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYPDLS 276
V +P+ TG + + APE + ++ DV+SFG+ +WE+ + PY +++
Sbjct: 200 VLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMT 259
Query: 277 FSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAI 329
+V S+ V + R P CP +L +M CW + +RP ++VS+L+A+
Sbjct: 260 NRDVISS-VEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDAL 311
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 124 bits (311), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 142/314 (45%), Gaps = 52/314 (16%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHD---------VAVKLLDWGEEGHRTEAEIA 95
WE KL + + G FG V G D VAVK+L + TE +++
Sbjct: 30 WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML----KDDATEKDLS 85
Query: 96 ALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGG 155
L S + H N+ +GA L+ V+VEY G
Sbjct: 86 DLVSEMEMMKMIGK---HKNIIHLLGACTQDGPLY----------------VIVEYASKG 126
Query: 156 ALKTYLIKNR--------------RRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTE 201
L+ YL R ++ FK +V LARG+ YL SQK +HRD+
Sbjct: 127 NLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAAR 186
Query: 202 NMLLDKNRTVKIADFGVARVEASNPNDMTGETG---TLGYMAPEVLNGNPYNRKCDVYSF 258
N+L+ +N +KIADFG+AR + +N + T + +MAPE L Y + DV+SF
Sbjct: 187 NVLVTENNVMKIADFGLAR-DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 259 GICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRP 317
G+ +WEI+ PYP + E+ ++++ R + P C + L +M+ CW A P +RP
Sbjct: 246 GVLMWEIFTLGGSPYPGIPVEELFK-LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRP 304
Query: 318 EMDEVVSMLEAIDT 331
++V L+ I T
Sbjct: 305 TFKQLVEDLDRILT 318
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 124 bits (311), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 136/290 (46%), Gaps = 32/290 (11%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDG-HDVAVKLLDWGEEGHRTEAEIAALRSAFTQ 103
WEI+P L + G FG V G + G +DVA+K++ +EG +E E F +
Sbjct: 4 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMI---KEGSMSEDE-------FIE 53
Query: 104 EVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIK 163
E V L H + + G V ++ EY+ G L YL +
Sbjct: 54 EAKVMMNLSHEKLVQLYG----------------VCTKQRPIFIITEYMANGCLLNYL-R 96
Query: 164 NRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR-VE 222
R + + ++++ D+ + YL S++ +HRD+ N L++ VK++DFG++R V
Sbjct: 97 EMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL 156
Query: 223 ASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVT 281
G + + PEVL + ++ K D+++FG+ +WEIY MPY + SE T
Sbjct: 157 DDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE-T 215
Query: 282 SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVS-MLEAID 330
+ + Q LR P + +M CW D+RP ++S +L+ +D
Sbjct: 216 AEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 265
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 124 bits (310), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 142/314 (45%), Gaps = 52/314 (16%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHD---------VAVKLLDWGEEGHRTEAEIA 95
WE KL + + G FG V G D VAVK+L + TE +++
Sbjct: 17 WEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKML----KDDATEKDLS 72
Query: 96 ALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGG 155
L S + H N+ +GA L+ V+VEY G
Sbjct: 73 DLVSEMEMMKMIGK---HKNIINLLGACTQDGPLY----------------VIVEYASKG 113
Query: 156 ALKTYLIKNR--------------RRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTE 201
L+ YL R ++ FK +V LARG+ YL SQK +HRD+
Sbjct: 114 NLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTAR 173
Query: 202 NMLLDKNRTVKIADFGVARVEASNPNDMTGETG---TLGYMAPEVLNGNPYNRKCDVYSF 258
N+L+ +N +KIADFG+AR + +N + T + +MAPE L Y + DV+SF
Sbjct: 174 NVLVTENNVMKIADFGLAR-DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 232
Query: 259 GICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRP 317
G+ +WEI+ PYP + E+ ++++ R + P C + L +M+ CW A P +RP
Sbjct: 233 GVLMWEIFTLGGSPYPGIPVEELFK-LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRP 291
Query: 318 EMDEVVSMLEAIDT 331
++V L+ I T
Sbjct: 292 TFKQLVEDLDRILT 305
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 142/314 (45%), Gaps = 52/314 (16%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHD---------VAVKLLDWGEEGHRTEAEIA 95
WE KL + + G FG V G D VAVK+L + TE +++
Sbjct: 22 WEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKML----KDDATEKDLS 77
Query: 96 ALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGG 155
L S + H N+ +GA L+ V+VEY G
Sbjct: 78 DLVSEMEMMKMIGK---HKNIINLLGACTQDGPLY----------------VIVEYASKG 118
Query: 156 ALKTYLIKNR--------------RRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTE 201
L+ YL R ++ FK +V LARG+ YL SQK +HRD+
Sbjct: 119 NLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAAR 178
Query: 202 NMLLDKNRTVKIADFGVARVEASNPNDMTGETG---TLGYMAPEVLNGNPYNRKCDVYSF 258
N+L+ +N +KIADFG+AR + +N + T + +MAPE L Y + DV+SF
Sbjct: 179 NVLVTENNVMKIADFGLAR-DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 237
Query: 259 GICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRP 317
G+ +WEI+ PYP + E+ ++++ R + P C + L +M+ CW A P +RP
Sbjct: 238 GVLMWEIFTLGGSPYPGIPVEELFK-LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRP 296
Query: 318 EMDEVVSMLEAIDT 331
++V L+ I T
Sbjct: 297 TFKQLVEDLDRILT 310
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 142/314 (45%), Gaps = 52/314 (16%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHD---------VAVKLLDWGEEGHRTEAEIA 95
WE KL + + G FG V G D VAVK+L + TE +++
Sbjct: 19 WEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKML----KDDATEKDLS 74
Query: 96 ALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGG 155
L S + H N+ +GA L+ V+VEY G
Sbjct: 75 DLVSEMEMMKMIGK---HKNIINLLGACTQDGPLY----------------VIVEYASKG 115
Query: 156 ALKTYLIKNR--------------RRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTE 201
L+ YL R ++ FK +V LARG+ YL SQK +HRD+
Sbjct: 116 NLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAAR 175
Query: 202 NMLLDKNRTVKIADFGVARVEASNPNDMTGETG---TLGYMAPEVLNGNPYNRKCDVYSF 258
N+L+ +N +KIADFG+AR + +N + T + +MAPE L Y + DV+SF
Sbjct: 176 NVLVTENNVMKIADFGLAR-DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 234
Query: 259 GICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRP 317
G+ +WEI+ PYP + E+ ++++ R + P C + L +M+ CW A P +RP
Sbjct: 235 GVLMWEIFTLGGSPYPGIPVEELFK-LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRP 293
Query: 318 EMDEVVSMLEAIDT 331
++V L+ I T
Sbjct: 294 TFKQLVEDLDRILT 307
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 142/314 (45%), Gaps = 52/314 (16%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHD---------VAVKLLDWGEEGHRTEAEIA 95
WE KL + + G FG V G D VAVK+L + TE +++
Sbjct: 30 WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML----KDDATEKDLS 85
Query: 96 ALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGG 155
L S + H N+ +GA L+ V+VEY G
Sbjct: 86 DLVSEMEMMKMIGK---HKNIINLLGACTQDGPLY----------------VIVEYASKG 126
Query: 156 ALKTYLIKNR--------------RRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTE 201
L+ YL R ++ FK +V LARG+ YL SQK +HRD+
Sbjct: 127 NLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAAR 186
Query: 202 NMLLDKNRTVKIADFGVARVEASNPNDMTGETG---TLGYMAPEVLNGNPYNRKCDVYSF 258
N+L+ +N ++IADFG+AR + +N + T + +MAPE L Y + DV+SF
Sbjct: 187 NVLVTENNVMRIADFGLAR-DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 259 GICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRP 317
G+ +WEI+ PYP + E+ ++++ R + P C + L +M+ CW A P +RP
Sbjct: 246 GVLMWEIFTLGGSPYPGIPVEELFK-LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRP 304
Query: 318 EMDEVVSMLEAIDT 331
++V L+ I T
Sbjct: 305 TFKQLVEDLDRILT 318
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 142/314 (45%), Gaps = 52/314 (16%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHD---------VAVKLLDWGEEGHRTEAEIA 95
WE KL + + G FG V G D VAVK+L + TE +++
Sbjct: 76 WEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKML----KDDATEKDLS 131
Query: 96 ALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGG 155
L S + H N+ +GA L+ V+VEY G
Sbjct: 132 DLVSEMEMMKMIGK---HKNIINLLGACTQDGPLY----------------VIVEYASKG 172
Query: 156 ALKTYLIKNR--------------RRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTE 201
L+ YL R ++ FK +V LARG+ YL SQK +HRD+
Sbjct: 173 NLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAAR 232
Query: 202 NMLLDKNRTVKIADFGVARVEASNPNDMTGETG---TLGYMAPEVLNGNPYNRKCDVYSF 258
N+L+ +N +KIADFG+AR + +N + T + +MAPE L Y + DV+SF
Sbjct: 233 NVLVTENNVMKIADFGLAR-DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 291
Query: 259 GICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRP 317
G+ +WEI+ PYP + E+ ++++ R + P C + L +M+ CW A P +RP
Sbjct: 292 GVLMWEIFTLGGSPYPGIPVEELFK-LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRP 350
Query: 318 EMDEVVSMLEAIDT 331
++V L+ I T
Sbjct: 351 TFKQLVEDLDRILT 364
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 136/292 (46%), Gaps = 31/292 (10%)
Query: 44 DWEIEPSKLVIKSVIARGTFGTVHRGLYDGH-DVAVKLLDWGEEGHRTEAEIAALRSAFT 102
+WE+ L + + G FG V G Y+GH VAVK L G + AF
Sbjct: 13 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG----------SMSPDAFL 62
Query: 103 QEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLI 162
E + +L H + + + A + ++I + EY+ G+L +L
Sbjct: 63 AEANLMKQLQHQRLVR-LYAVVTQEPIYI----------------ITEYMENGSLVDFLK 105
Query: 163 KNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR-V 221
KL ++ +A +A G++++ + +HRD++ N+L+ + KIADFG+AR +
Sbjct: 106 TPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLI 165
Query: 222 EASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSEV 280
E + G + + APE +N + K DV+SFGI L EI +PYP ++ EV
Sbjct: 166 EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 225
Query: 281 TSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTS 332
+ R R P CP L +M+ CW P+ RP D + S+LE T+
Sbjct: 226 IQNLER-GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 276
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 136/292 (46%), Gaps = 31/292 (10%)
Query: 44 DWEIEPSKLVIKSVIARGTFGTVHRGLYDGH-DVAVKLLDWGEEGHRTEAEIAALRSAFT 102
+WE+ L + + G FG V G Y+GH VAVK L G + AF
Sbjct: 12 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG----------SMSPDAFL 61
Query: 103 QEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLI 162
E + +L H + + + A + ++I + EY+ G+L +L
Sbjct: 62 AEANLMKQLQHQRLVR-LYAVVTQEPIYI----------------ITEYMENGSLVDFLK 104
Query: 163 KNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR-V 221
KL ++ +A +A G++++ + +HRD++ N+L+ + KIADFG+AR +
Sbjct: 105 TPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLI 164
Query: 222 EASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSEV 280
E + G + + APE +N + K DV+SFGI L EI +PYP ++ EV
Sbjct: 165 EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 224
Query: 281 TSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTS 332
+ R R P CP L +M+ CW P+ RP D + S+LE T+
Sbjct: 225 IQNLER-GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 275
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 136/292 (46%), Gaps = 31/292 (10%)
Query: 44 DWEIEPSKLVIKSVIARGTFGTVHRGLYDGH-DVAVKLLDWGEEGHRTEAEIAALRSAFT 102
+WE+ L + + G FG V G Y+GH VAVK L G + AF
Sbjct: 7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG----------SMSPDAFL 56
Query: 103 QEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLI 162
E + +L H + + + A + ++I + EY+ G+L +L
Sbjct: 57 AEANLMKQLQHQRLVR-LYAVVTQEPIYI----------------ITEYMENGSLVDFLK 99
Query: 163 KNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR-V 221
KL ++ +A +A G++++ + +HRD++ N+L+ + KIADFG+AR +
Sbjct: 100 TPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLI 159
Query: 222 EASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSEV 280
E + G + + APE +N + K DV+SFGI L EI +PYP ++ EV
Sbjct: 160 EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 219
Query: 281 TSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTS 332
+ R R P CP L +M+ CW P+ RP D + S+LE T+
Sbjct: 220 IQNLER-GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 136/292 (46%), Gaps = 31/292 (10%)
Query: 44 DWEIEPSKLVIKSVIARGTFGTVHRGLYDGH-DVAVKLLDWGEEGHRTEAEIAALRSAFT 102
+WE+ L + + G FG V G Y+GH VAVK L G + AF
Sbjct: 9 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG----------SMSPDAFL 58
Query: 103 QEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLI 162
E + +L H + + + A + ++I + EY+ G+L +L
Sbjct: 59 AEANLMKQLQHQRLVR-LYAVVTQEPIYI----------------ITEYMENGSLVDFLK 101
Query: 163 KNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR-V 221
KL ++ +A +A G++++ + +HRD++ N+L+ + KIADFG+AR +
Sbjct: 102 TPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLI 161
Query: 222 EASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSEV 280
E + G + + APE +N + K DV+SFGI L EI +PYP ++ EV
Sbjct: 162 EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 221
Query: 281 TSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTS 332
+ R R P CP L +M+ CW P+ RP D + S+LE T+
Sbjct: 222 IQNLER-GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 272
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 139/300 (46%), Gaps = 31/300 (10%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHD-VAVKLLDWGEEGHRTEAEIAALRSAFTQ 103
WEI L ++ + +G FG V G ++G VA+K L G AF Q
Sbjct: 13 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP----------EAFLQ 62
Query: 104 EVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIK 163
E V KL H + + A + ++I V+EY+ G+L +L
Sbjct: 63 EAQVMKKLRHEKLVQLY-AVVSEEPIYI----------------VIEYMSKGSLLDFLKG 105
Query: 164 NRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR-VE 222
+ L +V +A +A G++Y+ VHRD++ N+L+ +N K+ADFG+AR +E
Sbjct: 106 EMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 165
Query: 223 ASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSEVT 281
+ G + + APE + K DV+SFGI L E+ +PYP + EV
Sbjct: 166 DNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 225
Query: 282 SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTSKGGGMIPGD 341
V R R P CP SL ++M +CW +P++RP + + + LE TS PG+
Sbjct: 226 DQVER-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGE 284
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 136/292 (46%), Gaps = 31/292 (10%)
Query: 44 DWEIEPSKLVIKSVIARGTFGTVHRGLYDGH-DVAVKLLDWGEEGHRTEAEIAALRSAFT 102
+WE+ L + + G FG V G Y+GH VAVK L G + AF
Sbjct: 8 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG----------SMSPDAFL 57
Query: 103 QEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLI 162
E + +L H + + + A + ++I + EY+ G+L +L
Sbjct: 58 AEANLMKQLQHQRLVR-LYAVVTQEPIYI----------------ITEYMENGSLVDFLK 100
Query: 163 KNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR-V 221
KL ++ +A +A G++++ + +HRD++ N+L+ + KIADFG+AR +
Sbjct: 101 TPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLI 160
Query: 222 EASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSEV 280
E + G + + APE +N + K DV+SFGI L EI +PYP ++ EV
Sbjct: 161 EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 220
Query: 281 TSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTS 332
+ R R P CP L +M+ CW P+ RP D + S+LE T+
Sbjct: 221 IQNLER-GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 271
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 136/292 (46%), Gaps = 31/292 (10%)
Query: 44 DWEIEPSKLVIKSVIARGTFGTVHRGLYDGH-DVAVKLLDWGEEGHRTEAEIAALRSAFT 102
+WE+ L + + G FG V G Y+GH VAVK L G + AF
Sbjct: 2 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG----------SMSPDAFL 51
Query: 103 QEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLI 162
E + +L H + + + A + ++I + EY+ G+L +L
Sbjct: 52 AEANLMKQLQHQRLVR-LYAVVTQEPIYI----------------ITEYMENGSLVDFLK 94
Query: 163 KNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR-V 221
KL ++ +A +A G++++ + +HRD++ N+L+ + KIADFG+AR +
Sbjct: 95 TPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLI 154
Query: 222 EASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSEV 280
E + G + + APE +N + K DV+SFGI L EI +PYP ++ EV
Sbjct: 155 EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 214
Query: 281 TSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTS 332
+ R R P CP L +M+ CW P+ RP D + S+LE T+
Sbjct: 215 IQNLER-GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 265
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 136/289 (47%), Gaps = 35/289 (12%)
Query: 57 VIARGTFGTVHRGLYDGH-----DVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKL 111
VI +G FG V+ G Y A+K L E + EA F +E + L
Sbjct: 28 VIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEA--------FLREGLLMRGL 79
Query: 112 DHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAF 171
+HPNV IG + P + V++ Y+ G L + I++ +R
Sbjct: 80 NHPNVLALIGIMLP---------------PEGLPHVLLPYMCHGDLLQF-IRSPQRNPTV 123
Query: 172 KVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR----VEASNPN 227
K ++ L +ARG+ YL QK VHRD+ N +LD++ TVK+ADFG+AR E +
Sbjct: 124 KDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQ 183
Query: 228 DMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDM-PYPDLSFSEVTSAVVR 286
+ + A E L + K DV+SFG+ LWE+ PY + ++T + +
Sbjct: 184 QHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQ 243
Query: 287 QNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTSKGG 335
P+ P CP SL VM++CW+A+P RP +V +E I ++ G
Sbjct: 244 GRRLPQ-PEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLG 291
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 139/300 (46%), Gaps = 31/300 (10%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHD-VAVKLLDWGEEGHRTEAEIAALRSAFTQ 103
WEI L ++ + +G FG V G ++G VA+K L G AF Q
Sbjct: 13 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP----------EAFLQ 62
Query: 104 EVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIK 163
E V KL H + + A + ++I V+EY+ G+L +L
Sbjct: 63 EAQVMKKLRHEKLVQLY-AVVSEEPIYI----------------VIEYMSKGSLLDFLKG 105
Query: 164 NRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR-VE 222
+ L +V +A +A G++Y+ VHRD++ N+L+ +N K+ADFG+AR +E
Sbjct: 106 EMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 165
Query: 223 ASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSEVT 281
+ G + + APE + K DV+SFGI L E+ +PYP + EV
Sbjct: 166 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 225
Query: 282 SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTSKGGGMIPGD 341
V R R P CP SL ++M +CW +P++RP + + + LE TS PG+
Sbjct: 226 DQVER-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGE 284
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 138/296 (46%), Gaps = 40/296 (13%)
Query: 46 EIEPSKLVIKSVIARGTFGTVHRGLYDGHD------VAVKLLDWGEEGHRTEAEIAALRS 99
EI PS + + VI G FG V++G+ VA+K L G TE + R
Sbjct: 40 EIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAG----YTEKQ----RV 91
Query: 100 AFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKT 159
F E + + H N+ + G + I + EY+ GAL
Sbjct: 92 DFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI----------------ITEYMENGALDK 135
Query: 160 YLIKNRRRKLAFKVV--VQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFG 217
+L R + F V+ V + +A G+ YL + VHRD+ N+L++ N K++DFG
Sbjct: 136 FL---REKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFG 192
Query: 218 VARVEASNPNDMTGETG---TLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYP 273
++RV +P +G + + APE ++ + DV+SFGI +WE+ + PY
Sbjct: 193 LSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYW 252
Query: 274 DLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAI 329
+LS EV A + R P CPS++ +M +CW +RP+ ++VS+L+ +
Sbjct: 253 ELSNHEVMKA-INDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKL 307
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 136/292 (46%), Gaps = 31/292 (10%)
Query: 44 DWEIEPSKLVIKSVIARGTFGTVHRGLYDGH-DVAVKLLDWGEEGHRTEAEIAALRSAFT 102
+WE+ L + + G FG V G Y+GH VAVK L G + AF
Sbjct: 7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG----------SMSPDAFL 56
Query: 103 QEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLI 162
E + +L H + + + A + ++I + EY+ G+L +L
Sbjct: 57 AEANLMKQLQHQRLVR-LYAVVTQEPIYI----------------ITEYMENGSLVDFLK 99
Query: 163 KNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR-V 221
KL ++ +A +A G++++ + +HRD++ N+L+ + KIADFG+AR +
Sbjct: 100 TPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLI 159
Query: 222 EASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSEV 280
E + G + + APE +N + K DV+SFGI L EI +PYP ++ EV
Sbjct: 160 EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 219
Query: 281 TSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTS 332
+ R R P CP L +M+ CW P+ RP D + S+LE T+
Sbjct: 220 IQNLER-GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 141/314 (44%), Gaps = 52/314 (16%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHD---------VAVKLLDWGEEGHRTEAEIA 95
WE KL + + G FG V G D VAVK+L + TE +++
Sbjct: 30 WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML----KDDATEKDLS 85
Query: 96 ALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGG 155
L S + H N+ +GA L+ V+V Y G
Sbjct: 86 DLVSEMEMMKMIGK---HKNIINLLGACTQDGPLY----------------VIVAYASKG 126
Query: 156 ALKTYLIKNR--------------RRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTE 201
L+ YL R ++ FK +V LARG+ YL SQK +HRD+
Sbjct: 127 NLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAAR 186
Query: 202 NMLLDKNRTVKIADFGVARVEASNPNDMTGETG---TLGYMAPEVLNGNPYNRKCDVYSF 258
N+L+ +N +KIADFG+AR + +N + T + +MAPE L Y + DV+SF
Sbjct: 187 NVLVTENNVMKIADFGLAR-DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 259 GICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRP 317
G+ +WEI+ PYP + E+ ++++ R + P C + L +M+ CW A P +RP
Sbjct: 246 GVLMWEIFTLGGSPYPGIPVEELFK-LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRP 304
Query: 318 EMDEVVSMLEAIDT 331
++V L+ I T
Sbjct: 305 TFKQLVEDLDRILT 318
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 142/295 (48%), Gaps = 35/295 (11%)
Query: 44 DWEIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRS--AF 101
+WE+ K+ + + +G+FG V+ G+ G VK +T E A++R F
Sbjct: 4 EWEVAREKITMSRELGQGSFGMVYEGVAKG---VVKDEPETRVAIKTVNEAASMRERIEF 60
Query: 102 TQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYL 161
E +V + + +V + +G GQ + V++E + G LK+YL
Sbjct: 61 LNEASVMKEFNCHHVVRLLGVV----------SQGQPTL------VIMELMTRGDLKSYL 104
Query: 162 IKNRRRKL---------AFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVK 212
++ R ++ + ++Q+A ++A G++YL++ K VHRD+ N ++ ++ TVK
Sbjct: 105 -RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVK 163
Query: 213 IADFGVARVEASNPNDMTGETGTLG--YMAPEVLNGNPYNRKCDVYSFGICLWEI-YCCD 269
I DFG+ R G G L +M+PE L + DV+SFG+ LWEI +
Sbjct: 164 IGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 223
Query: 270 MPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVS 324
PY LS +V V+ L + P CP L +M+ CW NP RP E++S
Sbjct: 224 QPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLLELMRMCWQYNPKMRPSFLEIIS 277
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 135/298 (45%), Gaps = 31/298 (10%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGH-DVAVKLLDWGEEGHRTEAEIAALRSAFTQ 103
WE+ L + + G G V G Y+GH VAVK L G + AF
Sbjct: 8 WEVPRETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQG----------SMSPDAFLA 57
Query: 104 EVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIK 163
E + +L H + + A + ++I + EY+ G+L +L
Sbjct: 58 EANLMKQLQHQRLVRLY-AVVTQEPIYI----------------ITEYMENGSLVDFLKT 100
Query: 164 NRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR-VE 222
KL ++ +A +A G++++ + +HRD++ N+L+ + KIADFG+AR +E
Sbjct: 101 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE 160
Query: 223 ASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSEVT 281
+ G + + APE +N + K DV+SFGI L EI +PYP ++ EV
Sbjct: 161 DAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 220
Query: 282 SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTSKGGGMIP 339
+ R R P CP L +M+ CW P+ RP D + S+LE T+ G P
Sbjct: 221 QNLER-GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEGQYQP 277
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 158/320 (49%), Gaps = 41/320 (12%)
Query: 35 SNFLKKQRQDWEIEPSKLVIKSVIARGTFGTVHRGLYDGHD-----VAVKLLDWGEEGHR 89
S+ LK++ +D I + + ++ +G FG+V D VAVK+L
Sbjct: 8 SDELKEKLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKML-------- 59
Query: 90 TEAEIAALR--SAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCV 147
+A+I A F +E A + DHP+V K +G ++ S G++ +P V
Sbjct: 60 -KADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRA------KGRLPIP----MV 108
Query: 148 VVEYLPGGALKTYLIKNRRRK----LAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENM 203
++ ++ G L +L+ +R + L + +V+ +D+A G+ YL S+ +HRD+ N
Sbjct: 109 ILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNC 168
Query: 204 LLDKNRTVKIADFGVARVEASNPNDMTGETGTL--GYMAPEVLNGNPYNRKCDVYSFGIC 261
+L ++ TV +ADFG++R S G L ++A E L N Y DV++FG+
Sbjct: 169 MLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVT 228
Query: 262 LWEIYC-CDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRP--- 317
+WEI PY + +E+ + ++ N R + P C + ++M +CW A+P +RP
Sbjct: 229 MWEIMTRGQTPYAGIENAEIYNYLIGGN-RLKQPPECMEEVYDLMYQCWSADPKQRPSFT 287
Query: 318 ----EMDEVVSMLEAIDTSK 333
E++ ++ L + TS+
Sbjct: 288 CLRMELENILGHLSVLSTSQ 307
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 141/314 (44%), Gaps = 52/314 (16%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHD---------VAVKLLDWGEEGHRTEAEIA 95
WE KL + + G FG V G D VAVK+L + TE +++
Sbjct: 30 WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML----KDDATEKDLS 85
Query: 96 ALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGG 155
L S + H N+ +GA L+ V+V Y G
Sbjct: 86 DLVSEMEMMKMIGK---HKNIINLLGACTQDGPLY----------------VIVGYASKG 126
Query: 156 ALKTYLIKNR--------------RRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTE 201
L+ YL R ++ FK +V LARG+ YL SQK +HRD+
Sbjct: 127 NLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAAR 186
Query: 202 NMLLDKNRTVKIADFGVARVEASNPNDMTGETG---TLGYMAPEVLNGNPYNRKCDVYSF 258
N+L+ +N +KIADFG+AR + +N + T + +MAPE L Y + DV+SF
Sbjct: 187 NVLVTENNVMKIADFGLAR-DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 259 GICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRP 317
G+ +WEI+ PYP + E+ ++++ R + P C + L +M+ CW A P +RP
Sbjct: 246 GVLMWEIFTLGGSPYPGIPVEELFK-LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRP 304
Query: 318 EMDEVVSMLEAIDT 331
++V L+ I T
Sbjct: 305 TFKQLVEDLDRILT 318
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 142/295 (48%), Gaps = 35/295 (11%)
Query: 44 DWEIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRS--AF 101
+WE+ K+ + + +G+FG V+ G+ G VK +T E A++R F
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEGVAKG---VVKDEPETRVAIKTVNEAASMRERIEF 69
Query: 102 TQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYL 161
E +V + + +V + +G GQ + V++E + G LK+YL
Sbjct: 70 LNEASVMKEFNCHHVVRLLGVV----------SQGQPTL------VIMELMTRGDLKSYL 113
Query: 162 IKNRRRKL---------AFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVK 212
++ R ++ + ++Q+A ++A G++YL++ K VHRD+ N ++ ++ TVK
Sbjct: 114 -RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVK 172
Query: 213 IADFGVARVEASNPNDMTGETGTLG--YMAPEVLNGNPYNRKCDVYSFGICLWEI-YCCD 269
I DFG+ R G G L +M+PE L + DV+SFG+ LWEI +
Sbjct: 173 IGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 232
Query: 270 MPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVS 324
PY LS +V V+ L + P CP L +M+ CW NP RP E++S
Sbjct: 233 QPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 286
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 138/300 (46%), Gaps = 31/300 (10%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHD-VAVKLLDWGEEGHRTEAEIAALRSAFTQ 103
WEI L ++ + +G FG V G ++G VA+K L G AF Q
Sbjct: 13 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP----------EAFLQ 62
Query: 104 EVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIK 163
E V KL H + + A + ++I V EY+ G+L +L
Sbjct: 63 EAQVMKKLRHEKLVQLY-AVVSEEPIYI----------------VTEYMSKGSLLDFLKG 105
Query: 164 NRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR-VE 222
+ L +V +A +A G++Y+ VHRD++ N+L+ +N K+ADFG+AR +E
Sbjct: 106 EMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 165
Query: 223 ASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSEVT 281
+ G + + APE + K DV+SFGI L E+ +PYP + EV
Sbjct: 166 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 225
Query: 282 SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTSKGGGMIPGD 341
V R R P CP SL ++M +CW +P++RP + + + LE TS PG+
Sbjct: 226 DQVER-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGE 284
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 135/292 (46%), Gaps = 31/292 (10%)
Query: 44 DWEIEPSKLVIKSVIARGTFGTVHRGLYDGH-DVAVKLLDWGEEGHRTEAEIAALRSAFT 102
+WE+ L + + G FG V G Y+GH VAVK L G + AF
Sbjct: 3 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG----------SMSPDAFL 52
Query: 103 QEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLI 162
E + +L H + + A + ++I + EY+ G+L +L
Sbjct: 53 AEANLMKQLQHQRLVRLY-AVVTQEPIYI----------------ITEYMENGSLVDFLK 95
Query: 163 KNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR-V 221
KL ++ +A +A G++++ + +HR+++ N+L+ + KIADFG+AR +
Sbjct: 96 TPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRNLRAANILVSDTLSCKIADFGLARLI 155
Query: 222 EASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSEV 280
E + G + + APE +N + K DV+SFGI L EI +PYP ++ EV
Sbjct: 156 EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 215
Query: 281 TSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTS 332
+ R R P CP L +M+ CW P+ RP D + S+LE T+
Sbjct: 216 IQNLER-GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 266
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 138/300 (46%), Gaps = 31/300 (10%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHD-VAVKLLDWGEEGHRTEAEIAALRSAFTQ 103
WEI L ++ + +G FG V G ++G VA+K L G AF Q
Sbjct: 2 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP----------EAFLQ 51
Query: 104 EVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIK 163
E V KL H + + A + ++I V EY+ G+L +L
Sbjct: 52 EAQVMKKLRHEKLVQLY-AVVSEEPIYI----------------VTEYMSKGSLLDFLKG 94
Query: 164 NRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR-VE 222
+ L +V +A +A G++Y+ VHRD++ N+L+ +N K+ADFG+AR +E
Sbjct: 95 EMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 154
Query: 223 ASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSEVT 281
+ G + + APE + K DV+SFGI L E+ +PYP + EV
Sbjct: 155 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 214
Query: 282 SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTSKGGGMIPGD 341
V R R P CP SL ++M +CW +P++RP + + + LE TS PG+
Sbjct: 215 DQVER-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGE 273
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 138/300 (46%), Gaps = 31/300 (10%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHD-VAVKLLDWGEEGHRTEAEIAALRSAFTQ 103
WEI L ++ + +G FG V G ++G VA+K L G AF Q
Sbjct: 4 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP----------EAFLQ 53
Query: 104 EVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIK 163
E V KL H + + A + ++I V EY+ G+L +L
Sbjct: 54 EAQVMKKLRHEKLVQLY-AVVSEEPIYI----------------VTEYMSKGSLLDFLKG 96
Query: 164 NRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR-VE 222
+ L +V +A +A G++Y+ VHRD++ N+L+ +N K+ADFG+AR +E
Sbjct: 97 EMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 156
Query: 223 ASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSEVT 281
+ G + + APE + K DV+SFGI L E+ +PYP + EV
Sbjct: 157 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 216
Query: 282 SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTSKGGGMIPGD 341
V R R P CP SL ++M +CW +P++RP + + + LE TS PG+
Sbjct: 217 DQVER-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGE 275
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 121 bits (303), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 142/297 (47%), Gaps = 33/297 (11%)
Query: 44 DWEIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRS--AF 101
+WE+ K+ + + +G+FG V+ G + D+ +K +T E A+LR F
Sbjct: 11 EWEVSREKITLLRELGQGSFGMVYEG--NARDI-IKGEAETRVAVKTVNESASLRERIEF 67
Query: 102 TQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYL 161
E +V +V + +G GQ + VV+E + G LK+YL
Sbjct: 68 LNEASVMKGFTCHHVVRLLGVV----------SKGQPTL------VVMELMAHGDLKSYL 111
Query: 162 IKNR--------RRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKI 213
R R + ++Q+A ++A G++YL+++K VHRD+ N ++ + TVKI
Sbjct: 112 RSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKI 171
Query: 214 ADFGVARVEASNPNDMTGETGTLG--YMAPEVLNGNPYNRKCDVYSFGICLWEIYC-CDM 270
DFG+ R G G L +MAPE L + D++SFG+ LWEI +
Sbjct: 172 GDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQ 231
Query: 271 PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLE 327
PY LS +V V+ + P CP + ++M+ CW NP+ RP E+V++L+
Sbjct: 232 PYQGLSNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 287
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 121 bits (303), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 141/300 (47%), Gaps = 39/300 (13%)
Query: 46 EIEPSKLVIKSVIARGTFGTVHRGLYD-----GHDVAVKLLDWGEEGHRTEAEIAALRSA 100
E++ + + I V+ G FG V G VA+K L G TE + R
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG----YTEKQ----RRD 92
Query: 101 FTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTY 160
F E ++ + DHPN+ + G V S +V EY+ G+L ++
Sbjct: 93 FLGEASIMGQFDHPNIIRLEG----------------VVTKSKPVMIVTEYMENGSLDSF 136
Query: 161 LIKNRRRKLAFKVV--VQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGV 218
L R+ F V+ V + +A G+ YL VHRD+ N+L++ N K++DFG+
Sbjct: 137 L---RKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL 193
Query: 219 ARVEASNPNDMTGETG---TLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYPD 274
ARV +P G + + +PE + + DV+S+GI LWE+ + PY +
Sbjct: 194 ARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE 253
Query: 275 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTSKG 334
+S +V A V + R P CP++L +M CW + + RP+ +++VS+L+ + + G
Sbjct: 254 MSNQDVIKA-VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPG 312
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 121 bits (303), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 137/300 (45%), Gaps = 31/300 (10%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHD-VAVKLLDWGEEGHRTEAEIAALRSAFTQ 103
WEI L ++ + +G FG V G ++G VA+K L G AF Q
Sbjct: 13 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP----------EAFLQ 62
Query: 104 EVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIK 163
E V KL H + + S E P I C EY+ G+L +L
Sbjct: 63 EAQVMKKLRHEKLVQLYAVV--SEE------------PIYIVC---EYMSKGSLLDFLKG 105
Query: 164 NRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR-VE 222
+ L +V +A +A G++Y+ VHRD++ N+L+ +N K+ADFG+AR +E
Sbjct: 106 EMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 165
Query: 223 ASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSEVT 281
+ G + + APE + K DV+SFGI L E+ +PYP + EV
Sbjct: 166 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 225
Query: 282 SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTSKGGGMIPGD 341
V R R P CP SL ++M +CW +P++RP + + + LE TS PG+
Sbjct: 226 DQVER-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGE 284
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 121 bits (303), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 134/321 (41%), Gaps = 46/321 (14%)
Query: 30 PIGKASNFLKKQRQDWEIEPSKLVIKSVIARGTFGTVHRGLYDGHD-------VAVKLLD 82
P+ + L WE +L + + RG FG V G D VAVK+L
Sbjct: 7 PLDEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLK 66
Query: 83 WGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPS 142
G T +E AL S + + H H NV +GA P
Sbjct: 67 EGA----THSEHRALMSELKILIHIGH---HLNVVNLLGA---------------CTKPG 104
Query: 143 NICCVVVEYLPGGALKTYLIKNRRRKLAFKV--------------VVQLALDLARGLSYL 188
V+VE+ G L TYL R + +KV ++ + +A+G+ +L
Sbjct: 105 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL 164
Query: 189 HSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETG--TLGYMAPEVLNG 246
S+K +HRD+ N+LL + VKI DFG+AR +P+ + L +MAPE +
Sbjct: 165 ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFD 224
Query: 247 NPYNRKCDVYSFGICLWEIYCCDM-PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVM 305
Y + DV+SFG+ LWEI+ PYP + E +++ R P + M
Sbjct: 225 RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTM 284
Query: 306 KRCWDANPDKRPEMDEVVSML 326
CW P +RP E+V L
Sbjct: 285 LDCWHGEPSQRPTFSELVEHL 305
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 138/300 (46%), Gaps = 31/300 (10%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHD-VAVKLLDWGEEGHRTEAEIAALRSAFTQ 103
WEI L ++ + +G FG V G ++G VA+K L G AF Q
Sbjct: 13 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP----------EAFLQ 62
Query: 104 EVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIK 163
E V KL H + + A + ++I V+EY+ G L +L
Sbjct: 63 EAQVMKKLRHEKLVQLY-AVVSEEPIYI----------------VMEYMSKGCLLDFLKG 105
Query: 164 NRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR-VE 222
+ L +V +A +A G++Y+ VHRD++ N+L+ +N K+ADFG+AR +E
Sbjct: 106 EMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 165
Query: 223 ASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSEVT 281
+ G + + APE + K DV+SFGI L E+ +PYP + EV
Sbjct: 166 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 225
Query: 282 SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTSKGGGMIPGD 341
V R R P CP SL ++M +CW +P++RP + + + LE TS PG+
Sbjct: 226 DQVER-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGE 284
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 136/300 (45%), Gaps = 31/300 (10%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHD-VAVKLLDWGEEGHRTEAEIAALRSAFTQ 103
WEI L ++ + +G FG V G ++G VA+K L G AF Q
Sbjct: 3 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP----------EAFLQ 52
Query: 104 EVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIK 163
E V KL H + + SE I +V EY+ G+L +L
Sbjct: 53 EAQVMKKLRHEKLVQLYAVV---SEEPIX--------------IVTEYMSKGSLLDFLKG 95
Query: 164 NRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR-VE 222
+ L +V +A +A G++Y+ VHRD++ N+L+ +N K+ADFG+AR +E
Sbjct: 96 ETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 155
Query: 223 ASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSEVT 281
+ G + + APE + K DV+SFGI L E+ +PYP + EV
Sbjct: 156 DNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 215
Query: 282 SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTSKGGGMIPGD 341
V R R P CP SL ++M +CW P++RP + + + LE TS PG+
Sbjct: 216 DQVER-GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPGE 274
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 137/300 (45%), Gaps = 31/300 (10%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHD-VAVKLLDWGEEGHRTEAEIAALRSAFTQ 103
WEI L ++ + +G FG V G ++G VA+K L G AF Q
Sbjct: 6 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP----------EAFLQ 55
Query: 104 EVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIK 163
E V KL H + + A + ++I V EY+ G+L +L
Sbjct: 56 EAQVMKKLRHEKLVQLY-AVVSEEPIYI----------------VTEYMSKGSLLDFLKG 98
Query: 164 NRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR-VE 222
+ L +V +A +A G++Y+ VHRD++ N+L+ +N K+ADFG+AR +E
Sbjct: 99 ETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 158
Query: 223 ASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSEVT 281
+ G + + APE + K DV+SFGI L E+ +PYP + EV
Sbjct: 159 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 218
Query: 282 SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTSKGGGMIPGD 341
V R R P CP SL ++M +CW P++RP + + + LE TS PG+
Sbjct: 219 DQVER-GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPGE 277
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 137/296 (46%), Gaps = 34/296 (11%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGH-DVAVKLLDWGEEGHRTEAEIAALRSAFTQ 103
WEI + + + G FG V G Y+ VAVK L G + AF +
Sbjct: 8 WEIPRESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQ----------AFLE 57
Query: 104 EVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIK 163
E + L H + + ++I + EY+ G+L +L
Sbjct: 58 EANLMKTLQHDKLVRLYAVVTREEPIYI----------------ITEYMAKGSLLDFLKS 101
Query: 164 NRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEA 223
+ K+ ++ + +A G++Y+ + +HRD++ N+L+ ++ KIADFG+ARV
Sbjct: 102 DEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARV-- 159
Query: 224 SNPNDMTGETGT---LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSE 279
N+ T G + + APE +N + K DV+SFGI L+EI +PYP + ++
Sbjct: 160 IEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNAD 219
Query: 280 VTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTSKGG 335
V +A+ + P + CP L ++MK CW ++RP D + S+L+ T+ G
Sbjct: 220 VMTALSQGYRMPRVEN-CPDELYDIMKMCWKEKAEERPTFDYLQSVLDDFYTATEG 274
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 133/319 (41%), Gaps = 44/319 (13%)
Query: 30 PIGKASNFLKKQRQDWEIEPSKLVIKSVIARGTFGTVHRGLYDGHD-------VAVKLLD 82
P+ + L WE +L + + RG FG V G D VAVK+L
Sbjct: 9 PLDEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLK 68
Query: 83 WGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPS 142
G T +E AL S + + H H NV +GA P
Sbjct: 69 EGA----THSEHRALMSELKILIHIGH---HLNVVNLLGA---------------CTKPG 106
Query: 143 NICCVVVEYLPGGALKTYLIKNRRRKLAFKV------------VVQLALDLARGLSYLHS 190
V+VE+ G L TYL R + +K ++ + +A+G+ +L S
Sbjct: 107 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLAS 166
Query: 191 QKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETG--TLGYMAPEVLNGNP 248
+K +HRD+ N+LL + VKI DFG+AR +P+ + L +MAPE +
Sbjct: 167 RKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRV 226
Query: 249 YNRKCDVYSFGICLWEIYCCDM-PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKR 307
Y + DV+SFG+ LWEI+ PYP + E +++ R P + M
Sbjct: 227 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 286
Query: 308 CWDANPDKRPEMDEVVSML 326
CW P +RP E+V L
Sbjct: 287 CWHGEPSQRPTFSELVEHL 305
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 137/300 (45%), Gaps = 31/300 (10%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHD-VAVKLLDWGEEGHRTEAEIAALRSAFTQ 103
WEI L ++ + +G FG V G ++G VA+K L G AF Q
Sbjct: 13 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP----------EAFLQ 62
Query: 104 EVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIK 163
E V KL H + + A + ++I V EY+ G L +L
Sbjct: 63 EAQVMKKLRHEKLVQLY-AVVSEEPIYI----------------VTEYMSKGCLLDFLKG 105
Query: 164 NRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR-VE 222
+ L +V +A +A G++Y+ VHRD++ N+L+ +N K+ADFG+AR +E
Sbjct: 106 EMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 165
Query: 223 ASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSEVT 281
+ G + + APE + K DV+SFGI L E+ +PYP + EV
Sbjct: 166 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 225
Query: 282 SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTSKGGGMIPGD 341
V R R P CP SL ++M +CW +P++RP + + + LE TS PG+
Sbjct: 226 DQVER-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGE 284
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 134/321 (41%), Gaps = 46/321 (14%)
Query: 30 PIGKASNFLKKQRQDWEIEPSKLVIKSVIARGTFGTVHRGLYDGHD-------VAVKLLD 82
P+ + L WE +L + + RG FG V G D VAVK+L
Sbjct: 7 PLDEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLK 66
Query: 83 WGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPS 142
G T +E AL S + + H H NV +GA P
Sbjct: 67 EGA----THSEHRALMSELKILIHIGH---HLNVVNLLGA---------------CTKPG 104
Query: 143 NICCVVVEYLPGGALKTYLIKNRRRKLAFKV--------------VVQLALDLARGLSYL 188
V+VE+ G L TYL R + +KV ++ + +A+G+ +L
Sbjct: 105 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL 164
Query: 189 HSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETG--TLGYMAPEVLNG 246
S+K +HRD+ N+LL + VKI DFG+AR +P+ + L +MAPE +
Sbjct: 165 ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFD 224
Query: 247 NPYNRKCDVYSFGICLWEIYCCDM-PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVM 305
Y + DV+SFG+ LWEI+ PYP + E +++ R P + M
Sbjct: 225 RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTM 284
Query: 306 KRCWDANPDKRPEMDEVVSML 326
CW P +RP E+V L
Sbjct: 285 LDCWHGEPSQRPTFSELVEHL 305
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 120 bits (302), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 137/300 (45%), Gaps = 31/300 (10%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHD-VAVKLLDWGEEGHRTEAEIAALRSAFTQ 103
WEI L ++ + +G FG V G ++G VA+K L G AF Q
Sbjct: 262 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG----------TMSPEAFLQ 311
Query: 104 EVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIK 163
E V KL H + + A + ++I V EY+ G+L +L
Sbjct: 312 EAQVMKKLRHEKLVQLY-AVVSEEPIYI----------------VTEYMSKGSLLDFLKG 354
Query: 164 NRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR-VE 222
+ L +V +A +A G++Y+ VHRD++ N+L+ +N K+ADFG+AR +E
Sbjct: 355 ETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 414
Query: 223 ASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSEVT 281
+ G + + APE + K DV+SFGI L E+ +PYP + EV
Sbjct: 415 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 474
Query: 282 SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTSKGGGMIPGD 341
V R R P CP SL ++M +CW P++RP + + + LE TS PG+
Sbjct: 475 DQVER-GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQXQPGE 533
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 120 bits (302), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 133/317 (41%), Gaps = 42/317 (13%)
Query: 30 PIGKASNFLKKQRQDWEIEPSKLVIKSVIARGTFGTVHRGLYDGHD-------VAVKLLD 82
P+ + L WE +L + + RG FG V G D VAVK+L
Sbjct: 7 PLDEHCERLPYDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLK 66
Query: 83 WGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPS 142
G T +E AL S + + H H NV +GA P
Sbjct: 67 EGA----THSEHRALMSELKILIHIGH---HLNVVNLLGA---------------CTKPG 104
Query: 143 NICCVVVEYLPGGALKTYLIKNRRRKLAFK----------VVVQLALDLARGLSYLHSQK 192
V+VE+ G L TYL R + +K ++ + +A+G+ +L S+K
Sbjct: 105 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASRK 164
Query: 193 IVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETGT--LGYMAPEVLNGNPYN 250
+HRD+ N+LL + VKI DFG+AR +P+ + L +MAPE + Y
Sbjct: 165 XIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYT 224
Query: 251 RKCDVYSFGICLWEIYCCDM-PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCW 309
+ DV+SFG+ LWEI+ PYP + E +++ R P + M CW
Sbjct: 225 IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRLKEGTRMRAPDYTTPEMYQTMLDCW 284
Query: 310 DANPDKRPEMDEVVSML 326
P +RP E+V L
Sbjct: 285 HGEPSQRPTFSELVEHL 301
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 120 bits (302), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 130/306 (42%), Gaps = 46/306 (15%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHD-------VAVKLLDWGEEGHRTEAEIAAL 97
WE +L + + RG FG V G D VAVK+L G T +E AL
Sbjct: 13 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA----THSEHRAL 68
Query: 98 RSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGAL 157
S + + H H NV +GA P V+VE+ G L
Sbjct: 69 MSELKILIHIGH---HLNVVNLLGA---------------CTKPGGPLMVIVEFCKFGNL 110
Query: 158 KTYLIKNRRRKLAFKV--------------VVQLALDLARGLSYLHSQKIVHRDVKTENM 203
TYL R + +KV ++ + +A+G+ +L S+K +HRD+ N+
Sbjct: 111 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNI 170
Query: 204 LLDKNRTVKIADFGVARVEASNPNDMTGETGT--LGYMAPEVLNGNPYNRKCDVYSFGIC 261
LL + VKI DFG+AR +P+ + L +MAPE + Y + DV+SFG+
Sbjct: 171 LLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVL 230
Query: 262 LWEIYCCDM-PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMD 320
LWEI+ PYP + E +++ R P + M CW P +RP
Sbjct: 231 LWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFS 290
Query: 321 EVVSML 326
E+V L
Sbjct: 291 ELVEHL 296
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 120 bits (302), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 137/300 (45%), Gaps = 31/300 (10%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHD-VAVKLLDWGEEGHRTEAEIAALRSAFTQ 103
WEI L ++ + +G FG V G ++G VA+K L G AF Q
Sbjct: 179 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG----------TMSPEAFLQ 228
Query: 104 EVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIK 163
E V KL H + + A + ++I V EY+ G+L +L
Sbjct: 229 EAQVMKKLRHEKLVQLY-AVVSEEPIYI----------------VTEYMSKGSLLDFLKG 271
Query: 164 NRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR-VE 222
+ L +V +A +A G++Y+ VHRD++ N+L+ +N K+ADFG+AR +E
Sbjct: 272 ETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 331
Query: 223 ASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSEVT 281
+ G + + APE + K DV+SFGI L E+ +PYP + EV
Sbjct: 332 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 391
Query: 282 SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTSKGGGMIPGD 341
V R R P CP SL ++M +CW P++RP + + + LE TS PG+
Sbjct: 392 DQVER-GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPGE 450
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 120 bits (302), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 137/300 (45%), Gaps = 31/300 (10%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHD-VAVKLLDWGEEGHRTEAEIAALRSAFTQ 103
WEI L ++ + +G FG V G ++G VA+K L G AF Q
Sbjct: 179 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG----------TMSPEAFLQ 228
Query: 104 EVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIK 163
E V KL H + + A + ++I V EY+ G+L +L
Sbjct: 229 EAQVMKKLRHEKLVQLY-AVVSEEPIYI----------------VTEYMSKGSLLDFLKG 271
Query: 164 NRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR-VE 222
+ L +V +A +A G++Y+ VHRD++ N+L+ +N K+ADFG+AR +E
Sbjct: 272 ETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 331
Query: 223 ASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSEVT 281
+ G + + APE + K DV+SFGI L E+ +PYP + EV
Sbjct: 332 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 391
Query: 282 SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTSKGGGMIPGD 341
V R R P CP SL ++M +CW P++RP + + + LE TS PG+
Sbjct: 392 DQVER-GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQXQPGE 450
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 120 bits (302), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 138/300 (46%), Gaps = 31/300 (10%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHD-VAVKLLDWGEEGHRTEAEIAALRSAFTQ 103
WEI L ++ + +G FG V G ++G VA+K L G AF Q
Sbjct: 13 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP----------EAFLQ 62
Query: 104 EVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIK 163
E V K+ H + + A + ++I V EY+ G+L +L
Sbjct: 63 EAQVMKKIRHEKLVQLY-AVVSEEPIYI----------------VTEYMSKGSLLDFLKG 105
Query: 164 NRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR-VE 222
+ L +V +A +A G++Y+ VHRD++ N+L+ +N K+ADFG+AR +E
Sbjct: 106 EMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 165
Query: 223 ASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSEVT 281
+ G + + APE + K DV+SFGI L E+ +PYP + EV
Sbjct: 166 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 225
Query: 282 SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTSKGGGMIPGD 341
V R R P CP SL ++M +CW +P++RP + + + LE TS PG+
Sbjct: 226 DQVER-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGE 284
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 120 bits (302), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 141/300 (47%), Gaps = 39/300 (13%)
Query: 46 EIEPSKLVIKSVIARGTFGTVHRGLYD-----GHDVAVKLLDWGEEGHRTEAEIAALRSA 100
E++ + + I V+ G FG V G VA+K L G TE + R
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG----YTEKQ----RRD 92
Query: 101 FTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTY 160
F E ++ + DHPN+ + G V S +V EY+ G+L ++
Sbjct: 93 FLGEASIMGQFDHPNIIRLEG----------------VVTKSKPVMIVTEYMENGSLDSF 136
Query: 161 LIKNRRRKLAFKVV--VQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGV 218
L R+ F V+ V + +A G+ YL VHRD+ N+L++ N K++DFG+
Sbjct: 137 L---RKHDAQFTVIQLVGMLRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGL 193
Query: 219 ARVEASNPNDMTGETG---TLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYPD 274
+RV +P G + + +PE + + DV+S+GI LWE+ + PY +
Sbjct: 194 SRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE 253
Query: 275 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTSKG 334
+S +V A V + R P CP++L +M CW + + RP+ +++VS+L+ + + G
Sbjct: 254 MSNQDVIKA-VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPG 312
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 141/297 (47%), Gaps = 33/297 (11%)
Query: 44 DWEIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRS--AF 101
+WE+ K+ + + +G+FG V+ G + D+ +K +T E A+LR F
Sbjct: 11 EWEVSREKITLLRELGQGSFGMVYEG--NARDI-IKGEAETRVAVKTVNESASLRERIEF 67
Query: 102 TQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYL 161
E +V +V + +G GQ + VV+E + G LK+YL
Sbjct: 68 LNEASVMKGFTCHHVVRLLGVV----------SKGQPTL------VVMELMAHGDLKSYL 111
Query: 162 IKNR--------RRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKI 213
R R + ++Q+A ++A G++YL+++K VHRD+ N ++ + TVKI
Sbjct: 112 RSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKI 171
Query: 214 ADFGVARVEASNPNDMTGETGTLG--YMAPEVLNGNPYNRKCDVYSFGICLWEIYC-CDM 270
DFG+ R G G L +MAPE L + D++SFG+ LWEI +
Sbjct: 172 GDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQ 231
Query: 271 PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLE 327
PY LS +V V+ + P CP + ++M+ CW NP RP E+V++L+
Sbjct: 232 PYQGLSNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 141/295 (47%), Gaps = 35/295 (11%)
Query: 44 DWEIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRS--AF 101
+WE+ K+ + + +G+FG V+ G+ G VK +T E A++R F
Sbjct: 9 EWEVAREKITMSRELGQGSFGMVYEGVAKG---VVKDEPETRVAIKTVNEAASMRERIEF 65
Query: 102 TQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYL 161
E +V + + +V + +G GQ + V++E + G LK+YL
Sbjct: 66 LNEASVMKEFNCHHVVRLLGVV----------SQGQPTL------VIMELMTRGDLKSYL 109
Query: 162 IKNRRRKLA---------FKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVK 212
++ R +A ++Q+A ++A G++YL++ K VHRD+ N ++ ++ TVK
Sbjct: 110 -RSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVK 168
Query: 213 IADFGVARVEASNPNDMTGETGTLG--YMAPEVLNGNPYNRKCDVYSFGICLWEIYC-CD 269
I DFG+ R G G L +M+PE L + DV+SFG+ LWEI +
Sbjct: 169 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 228
Query: 270 MPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVS 324
PY LS +V V+ L + P CP L +M+ CW NP RP E++S
Sbjct: 229 QPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 282
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 137/300 (45%), Gaps = 31/300 (10%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHD-VAVKLLDWGEEGHRTEAEIAALRSAFTQ 103
WEI L ++ + +G FG V G ++G VA+K L G AF Q
Sbjct: 13 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP----------EAFLQ 62
Query: 104 EVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIK 163
E V KL H + + A + ++I V EY+ G+L +L
Sbjct: 63 EAQVMKKLRHEKLVQLY-AVVSEEPIYI----------------VTEYMSKGSLLDFLKG 105
Query: 164 NRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR-VE 222
+ L +V +A +A G++Y+ VHRD+ N+L+ +N K+ADFG+AR +E
Sbjct: 106 EMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLAAANILVGENLVCKVADFGLARLIE 165
Query: 223 ASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSEVT 281
+ G + + APE + K DV+SFGI L E+ +PYP + EV
Sbjct: 166 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 225
Query: 282 SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTSKGGGMIPGD 341
V R R P CP SL ++M +CW +P++RP + + + LE TS PG+
Sbjct: 226 DQVER-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGE 284
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 141/297 (47%), Gaps = 33/297 (11%)
Query: 44 DWEIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRS--AF 101
+WE+ K+ + + +G+FG V+ G + D+ +K +T E A+LR F
Sbjct: 8 EWEVSREKITLLRELGQGSFGMVYEG--NARDI-IKGEAETRVAVKTVNESASLRERIEF 64
Query: 102 TQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYL 161
E +V +V + +G GQ + VV+E + G LK+YL
Sbjct: 65 LNEASVMKGFTCHHVVRLLGVV----------SKGQPTL------VVMELMAHGDLKSYL 108
Query: 162 IKNR--------RRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKI 213
R R + ++Q+A ++A G++YL+++K VHRD+ N ++ + TVKI
Sbjct: 109 RSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKI 168
Query: 214 ADFGVARVEASNPNDMTGETGTLG--YMAPEVLNGNPYNRKCDVYSFGICLWEIYC-CDM 270
DFG+ R G G L +MAPE L + D++SFG+ LWEI +
Sbjct: 169 GDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQ 228
Query: 271 PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLE 327
PY LS +V V+ + P CP + ++M+ CW NP RP E+V++L+
Sbjct: 229 PYQGLSNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 284
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 134/321 (41%), Gaps = 46/321 (14%)
Query: 30 PIGKASNFLKKQRQDWEIEPSKLVIKSVIARGTFGTVHRGLYDGHD-------VAVKLLD 82
P+ + L WE +L + + RG FG V G D VAVK+L
Sbjct: 44 PLDEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLK 103
Query: 83 WGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPS 142
G T +E AL S + + H H NV +GA P
Sbjct: 104 EGA----THSEHRALMSELKILIHIGH---HLNVVNLLGA---------------CTKPG 141
Query: 143 NICCVVVEYLPGGALKTYLIKNRRRKLAFKV--------------VVQLALDLARGLSYL 188
V+VE+ G L TYL R + +KV ++ + +A+G+ +L
Sbjct: 142 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL 201
Query: 189 HSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETGT--LGYMAPEVLNG 246
S+K +HRD+ N+LL + VKI DFG+AR +P+ + L +MAPE +
Sbjct: 202 ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD 261
Query: 247 NPYNRKCDVYSFGICLWEIYCCDM-PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVM 305
Y + DV+SFG+ LWEI+ PYP + E +++ R P + M
Sbjct: 262 RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTM 321
Query: 306 KRCWDANPDKRPEMDEVVSML 326
CW P +RP E+V L
Sbjct: 322 LDCWHGEPSQRPTFSELVEHL 342
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 141/295 (47%), Gaps = 35/295 (11%)
Query: 44 DWEIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRS--AF 101
+WE+ K+ + + +G+FG V+ G+ G VK +T E A++R F
Sbjct: 19 EWEVAREKITMSRELGQGSFGMVYEGVAKG---VVKDEPETRVAIKTVNEAASMRERIEF 75
Query: 102 TQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYL 161
E +V + + +V + +G GQ + V++E + G LK+YL
Sbjct: 76 LNEASVMKEFNCHHVVRLLGVV----------SQGQPTL------VIMELMTRGDLKSYL 119
Query: 162 IKNRRRKLA---------FKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVK 212
++ R +A ++Q+A ++A G++YL++ K VHRD+ N ++ ++ TVK
Sbjct: 120 -RSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVK 178
Query: 213 IADFGVARVEASNPNDMTGETGTLG--YMAPEVLNGNPYNRKCDVYSFGICLWEI-YCCD 269
I DFG+ R G G L +M+PE L + DV+SFG+ LWEI +
Sbjct: 179 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 238
Query: 270 MPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVS 324
PY LS +V V+ L + P CP L +M+ CW NP RP E++S
Sbjct: 239 QPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 292
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 142/295 (48%), Gaps = 35/295 (11%)
Query: 44 DWEIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRS--AF 101
+WE+ K+ + + +G+FG V+ G+ G VK +T E A++R F
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKG---VVKDEPETRVAIKTVNEAASMRERIEF 62
Query: 102 TQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYL 161
E +V + + +V + +G GQ + V++E + G LK+YL
Sbjct: 63 LNEASVMKEFNCHHVVRLLGVV----------SQGQPTL------VIMELMTRGDLKSYL 106
Query: 162 IKNRRRKL---------AFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVK 212
++ R ++ + ++Q+A ++A G++YL++ K VHRD+ N ++ ++ TVK
Sbjct: 107 -RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVK 165
Query: 213 IADFGVARVEASNPNDMTGETGTLG--YMAPEVLNGNPYNRKCDVYSFGICLWEI-YCCD 269
I DFG+ R G G L +M+PE L + DV+SFG+ LWEI +
Sbjct: 166 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 225
Query: 270 MPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVS 324
PY LS +V V+ L + P CP L +M+ CW NP RP E++S
Sbjct: 226 QPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 279
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 142/295 (48%), Gaps = 35/295 (11%)
Query: 44 DWEIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRS--AF 101
+WE+ K+ + + +G+FG V+ G+ G VK +T E A++R F
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEGVAKG---VVKDEPETRVAIKTVNEAASMRERIEF 69
Query: 102 TQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYL 161
E +V + + +V + +G GQ + V++E + G LK+YL
Sbjct: 70 LNEASVMKEFNCHHVVRLLGVV----------SQGQPTL------VIMELMTRGDLKSYL 113
Query: 162 IKNRRRKL---------AFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVK 212
++ R ++ + ++Q+A ++A G++YL++ K VHRD+ N ++ ++ TVK
Sbjct: 114 -RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVK 172
Query: 213 IADFGVARVEASNPNDMTGETGTLG--YMAPEVLNGNPYNRKCDVYSFGICLWEI-YCCD 269
I DFG+ R G G L +M+PE L + DV+SFG+ LWEI +
Sbjct: 173 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 232
Query: 270 MPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVS 324
PY LS +V V+ L + P CP L +M+ CW NP RP E++S
Sbjct: 233 QPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 286
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/311 (29%), Positives = 139/311 (44%), Gaps = 50/311 (16%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHD---------VAVKLLDWGEEGHRTEAEIA 95
WE+ +LV+ + G FG V G D VAVK+L + TE +++
Sbjct: 23 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML----KSDATEKDLS 78
Query: 96 ALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGG 155
L S + H N+ +GA L+ V+VEY G
Sbjct: 79 DLISEMEMMKMIGK---HKNIINLLGACTQDGPLY----------------VIVEYASKG 119
Query: 156 ALKTYLIKNRRRKLAF--------------KVVVQLALDLARGLSYLHSQKIVHRDVKTE 201
L+ YL R L F K +V A +ARG+ YL S+K +HRD+
Sbjct: 120 NLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAAR 179
Query: 202 NMLLDKNRTVKIADFGVARVEASNPNDMTGETGTL--GYMAPEVLNGNPYNRKCDVYSFG 259
N+L+ ++ +KIADFG+AR G L +MAPE L Y + DV+SFG
Sbjct: 180 NVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG 239
Query: 260 ICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPE 318
+ LWEI+ PYP + E+ ++++ R + P C + L +M+ CW A P +RP
Sbjct: 240 VLLWEIFTLGGSPYPGVPVEELFK-LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPT 298
Query: 319 MDEVVSMLEAI 329
++V L+ I
Sbjct: 299 FKQLVEDLDRI 309
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 141/300 (47%), Gaps = 39/300 (13%)
Query: 46 EIEPSKLVIKSVIARGTFGTVHRGLYD-----GHDVAVKLLDWGEEGHRTEAEIAALRSA 100
E++ + + I V+ G FG V G VA+K L G TE + R
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG----YTEKQ----RRD 92
Query: 101 FTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTY 160
F E ++ + DHPN+ + G V S +V EY+ G+L ++
Sbjct: 93 FLGEASIMGQFDHPNIIRLEG----------------VVTKSKPVMIVTEYMENGSLDSF 136
Query: 161 LIKNRRRKLAFKVV--VQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGV 218
L R+ F V+ V + +A G+ YL VHRD+ N+L++ N K++DFG+
Sbjct: 137 L---RKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL 193
Query: 219 ARVEASNPNDMTGETG---TLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYPD 274
+RV +P G + + +PE + + DV+S+GI LWE+ + PY +
Sbjct: 194 SRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE 253
Query: 275 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTSKG 334
+S +V A V + R P CP++L +M CW + + RP+ +++VS+L+ + + G
Sbjct: 254 MSNQDVIKA-VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPG 312
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 142/295 (48%), Gaps = 35/295 (11%)
Query: 44 DWEIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRS--AF 101
+WE+ K+ + + +G+FG V+ G+ G VK +T E A++R F
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEGVAKG---VVKDEPETRVAIKTVNEAASMRERIEF 68
Query: 102 TQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYL 161
E +V + + +V + +G GQ + V++E + G LK+YL
Sbjct: 69 LNEASVMKEFNCHHVVRLLGVV----------SQGQPTL------VIMELMTRGDLKSYL 112
Query: 162 IKNRRRKL---------AFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVK 212
++ R ++ + ++Q+A ++A G++YL++ K VHRD+ N ++ ++ TVK
Sbjct: 113 -RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVK 171
Query: 213 IADFGVARVEASNPNDMTGETGTL--GYMAPEVLNGNPYNRKCDVYSFGICLWEI-YCCD 269
I DFG+ R G G L +M+PE L + DV+SFG+ LWEI +
Sbjct: 172 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 231
Query: 270 MPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVS 324
PY LS +V V+ L + P CP L +M+ CW NP RP E++S
Sbjct: 232 QPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 285
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 134/321 (41%), Gaps = 46/321 (14%)
Query: 30 PIGKASNFLKKQRQDWEIEPSKLVIKSVIARGTFGTVHRGLYDGHD-------VAVKLLD 82
P+ + L WE +L + + RG FG V G D VAVK+L
Sbjct: 7 PLDEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLK 66
Query: 83 WGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPS 142
G T +E AL S + + H H NV +GA P
Sbjct: 67 EGA----THSEHRALMSELKILIHIGH---HLNVVNLLGA---------------CTKPG 104
Query: 143 NICCVVVEYLPGGALKTYLIKNRRRKLAFKV--------------VVQLALDLARGLSYL 188
V+VE+ G L TYL R + +KV ++ + +A+G+ +L
Sbjct: 105 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL 164
Query: 189 HSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETG--TLGYMAPEVLNG 246
S+K +HRD+ N+LL + VKI DFG+AR +P+ + L +MAPE +
Sbjct: 165 ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD 224
Query: 247 NPYNRKCDVYSFGICLWEIYCCDM-PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVM 305
Y + DV+SFG+ LWEI+ PYP + E +++ R P + M
Sbjct: 225 RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTM 284
Query: 306 KRCWDANPDKRPEMDEVVSML 326
CW P +RP E+V L
Sbjct: 285 LDCWHGEPSQRPTFSELVEHL 305
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 141/300 (47%), Gaps = 39/300 (13%)
Query: 46 EIEPSKLVIKSVIARGTFGTVHRGLYD-----GHDVAVKLLDWGEEGHRTEAEIAALRSA 100
E++ + + I V+ G FG V G VA+K L G TE + R
Sbjct: 39 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG----YTEKQ----RRD 90
Query: 101 FTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTY 160
F E ++ + DHPN+ + G V S +V EY+ G+L ++
Sbjct: 91 FLGEASIMGQFDHPNIIRLEG----------------VVTKSKPVMIVTEYMENGSLDSF 134
Query: 161 LIKNRRRKLAFKVV--VQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGV 218
L R+ F V+ V + +A G+ YL VHRD+ N+L++ N K++DFG+
Sbjct: 135 L---RKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL 191
Query: 219 ARVEASNPNDMTGETG---TLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYPD 274
+RV +P G + + +PE + + DV+S+GI LWE+ + PY +
Sbjct: 192 SRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE 251
Query: 275 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTSKG 334
+S +V A V + R P CP++L +M CW + + RP+ +++VS+L+ + + G
Sbjct: 252 MSNQDVIKA-VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPG 310
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 141/300 (47%), Gaps = 39/300 (13%)
Query: 46 EIEPSKLVIKSVIARGTFGTVHRGLYD-----GHDVAVKLLDWGEEGHRTEAEIAALRSA 100
E++ + + I V+ G FG V G VA+K L G TE + R
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG----YTEKQ----RRD 92
Query: 101 FTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTY 160
F E ++ + DHPN+ + G V S +V EY+ G+L ++
Sbjct: 93 FLGEASIMGQFDHPNIIRLEG----------------VVTKSKPVMIVTEYMENGSLDSF 136
Query: 161 LIKNRRRKLAFKVV--VQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGV 218
L R+ F V+ V + +A G+ YL VHRD+ N+L++ N K++DFG+
Sbjct: 137 L---RKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL 193
Query: 219 ARVEASNPNDMTGETG---TLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYPD 274
+RV +P G + + +PE + + DV+S+GI LWE+ + PY +
Sbjct: 194 SRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE 253
Query: 275 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTSKG 334
+S +V A V + R P CP++L +M CW + + RP+ +++VS+L+ + + G
Sbjct: 254 MSNQDVIKA-VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPG 312
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 141/300 (47%), Gaps = 39/300 (13%)
Query: 46 EIEPSKLVIKSVIARGTFGTVHRGLYD-----GHDVAVKLLDWGEEGHRTEAEIAALRSA 100
E++ + + I V+ G FG V G VA+K L G TE + R
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG----YTEKQ----RRD 92
Query: 101 FTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTY 160
F E ++ + DHPN+ + G V S +V EY+ G+L ++
Sbjct: 93 FLGEASIMGQFDHPNIIRLEG----------------VVTKSKPVMIVTEYMENGSLDSF 136
Query: 161 LIKNRRRKLAFKVV--VQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGV 218
L R+ F V+ V + +A G+ YL VHRD+ N+L++ N K++DFG+
Sbjct: 137 L---RKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL 193
Query: 219 ARVEASNPNDMTGETG---TLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYPD 274
+RV +P G + + +PE + + DV+S+GI LWE+ + PY +
Sbjct: 194 SRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE 253
Query: 275 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTSKG 334
+S +V A V + R P CP++L +M CW + + RP+ +++VS+L+ + + G
Sbjct: 254 MSNQDVIKA-VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPG 312
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 141/300 (47%), Gaps = 39/300 (13%)
Query: 46 EIEPSKLVIKSVIARGTFGTVHRGLYD-----GHDVAVKLLDWGEEGHRTEAEIAALRSA 100
E++ + + I V+ G FG V G VA+K L G TE + R
Sbjct: 29 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG----YTEKQ----RRD 80
Query: 101 FTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTY 160
F E ++ + DHPN+ + G V S +V EY+ G+L ++
Sbjct: 81 FLGEASIMGQFDHPNIIRLEG----------------VVTKSKPVMIVTEYMENGSLDSF 124
Query: 161 LIKNRRRKLAFKVV--VQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGV 218
L R+ F V+ V + +A G+ YL VHRD+ N+L++ N K++DFG+
Sbjct: 125 L---RKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL 181
Query: 219 ARVEASNPNDMTGETG---TLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYPD 274
+RV +P G + + +PE + + DV+S+GI LWE+ + PY +
Sbjct: 182 SRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE 241
Query: 275 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTSKG 334
+S +V A V + R P CP++L +M CW + + RP+ +++VS+L+ + + G
Sbjct: 242 MSNQDVIKA-VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPG 300
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 141/300 (47%), Gaps = 39/300 (13%)
Query: 46 EIEPSKLVIKSVIARGTFGTVHRGLYD-----GHDVAVKLLDWGEEGHRTEAEIAALRSA 100
E++ + + I V+ G FG V G VA+K L G TE + R
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG----YTEKQ----RRD 92
Query: 101 FTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTY 160
F E ++ + DHPN+ + G V S +V EY+ G+L ++
Sbjct: 93 FLGEASIMGQFDHPNIIRLEG----------------VVTKSKPVMIVTEYMENGSLDSF 136
Query: 161 LIKNRRRKLAFKVV--VQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGV 218
L R+ F V+ V + +A G+ YL VHRD+ N+L++ N K++DFG+
Sbjct: 137 L---RKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL 193
Query: 219 ARVEASNPNDMTGETG---TLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYPD 274
+RV +P G + + +PE + + DV+S+GI LWE+ + PY +
Sbjct: 194 SRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE 253
Query: 275 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTSKG 334
+S +V A V + R P CP++L +M CW + + RP+ +++VS+L+ + + G
Sbjct: 254 MSNQDVIKA-VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPG 312
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 141/300 (47%), Gaps = 39/300 (13%)
Query: 46 EIEPSKLVIKSVIARGTFGTVHRGLYD-----GHDVAVKLLDWGEEGHRTEAEIAALRSA 100
E++ + + I V+ G FG V G VA+K L G TE + R
Sbjct: 12 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG----YTEKQ----RRD 63
Query: 101 FTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTY 160
F E ++ + DHPN+ + G V S +V EY+ G+L ++
Sbjct: 64 FLGEASIMGQFDHPNIIRLEG----------------VVTKSKPVMIVTEYMENGSLDSF 107
Query: 161 LIKNRRRKLAFKVV--VQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGV 218
L R+ F V+ V + +A G+ YL VHRD+ N+L++ N K++DFG+
Sbjct: 108 L---RKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL 164
Query: 219 ARVEASNPNDMTGETG---TLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYPD 274
+RV +P G + + +PE + + DV+S+GI LWE+ + PY +
Sbjct: 165 SRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE 224
Query: 275 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTSKG 334
+S +V A V + R P CP++L +M CW + + RP+ +++VS+L+ + + G
Sbjct: 225 MSNQDVIKA-VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPG 283
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 142/295 (48%), Gaps = 35/295 (11%)
Query: 44 DWEIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRS--AF 101
+WE+ K+ + + +G+FG V+ G+ G VK +T E A++R F
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEGVAKG---VVKDEPETRVAIKTVNEAASMRERIEF 68
Query: 102 TQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYL 161
E +V + + +V + +G GQ + V++E + G LK+YL
Sbjct: 69 LNEASVMKEFNCHHVVRLLGVV----------SQGQPTL------VIMELMTRGDLKSYL 112
Query: 162 IKNRRRKL---------AFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVK 212
++ R ++ + ++Q+A ++A G++YL++ K VHRD+ N ++ ++ TVK
Sbjct: 113 -RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVK 171
Query: 213 IADFGVARVEASNPNDMTGETGTLG--YMAPEVLNGNPYNRKCDVYSFGICLWEI-YCCD 269
I DFG+ R G G L +M+PE L + DV+SFG+ LWEI +
Sbjct: 172 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 231
Query: 270 MPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVS 324
PY LS +V V+ L + P CP L +M+ CW NP RP E++S
Sbjct: 232 QPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 285
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 142/295 (48%), Gaps = 35/295 (11%)
Query: 44 DWEIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRS--AF 101
+WE+ K+ + + +G+FG V+ G+ G VK +T E A++R F
Sbjct: 10 EWEVAREKITMSRELGQGSFGMVYEGVAKG---VVKDEPETRVAIKTVNEAASMRERIEF 66
Query: 102 TQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYL 161
E +V + + +V + +G GQ + V++E + G LK+YL
Sbjct: 67 LNEASVMKEFNCHHVVRLLGVV----------SQGQPTL------VIMELMTRGDLKSYL 110
Query: 162 IKNRRRKL---------AFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVK 212
++ R ++ + ++Q+A ++A G++YL++ K VHRD+ N ++ ++ TVK
Sbjct: 111 -RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVK 169
Query: 213 IADFGVARVEASNPNDMTGETGTL--GYMAPEVLNGNPYNRKCDVYSFGICLWEI-YCCD 269
I DFG+ R G G L +M+PE L + DV+SFG+ LWEI +
Sbjct: 170 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 229
Query: 270 MPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVS 324
PY LS +V V+ L + P CP L +M+ CW NP RP E++S
Sbjct: 230 QPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 283
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 133/320 (41%), Gaps = 45/320 (14%)
Query: 30 PIGKASNFLKKQRQDWEIEPSKLVIKSVIARGTFGTVHRGLYDGHD-------VAVKLLD 82
P+ + L WE +L + + RG FG V G D VAVK+L
Sbjct: 8 PLDEHCERLPYDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLK 67
Query: 83 WGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPS 142
G T +E AL S + + H H NV +GA P
Sbjct: 68 EGA----THSEHRALMSELKILIHIGH---HLNVVNLLGA---------------CTKPG 105
Query: 143 NICCVVVEYLPGGALKTYLIKNRRRKLAFKV-------------VVQLALDLARGLSYLH 189
V+VE+ G L TYL R + +K ++ + +A+G+ +L
Sbjct: 106 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLA 165
Query: 190 SQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETG--TLGYMAPEVLNGN 247
S+K +HRD+ N+LL + VKI DFG+AR +P+ + L +MAPE +
Sbjct: 166 SRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDR 225
Query: 248 PYNRKCDVYSFGICLWEIYCCDM-PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMK 306
Y + DV+SFG+ LWEI+ PYP + E +++ R P + M
Sbjct: 226 VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTML 285
Query: 307 RCWDANPDKRPEMDEVVSML 326
CW P +RP E+V L
Sbjct: 286 DCWHGEPSQRPTFSELVEHL 305
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 140/300 (46%), Gaps = 39/300 (13%)
Query: 46 EIEPSKLVIKSVIARGTFGTVHRGLYD-----GHDVAVKLLDWGEEGHRTEAEIAALRSA 100
E++ + + I V+ G FG V G VA+K L G TE + R
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG----YTEKQ----RRD 92
Query: 101 FTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTY 160
F E ++ + DHPN+ + G V S +V EY+ G+L ++
Sbjct: 93 FLGEASIMGQFDHPNIIRLEG----------------VVTKSKPVMIVTEYMENGSLDSF 136
Query: 161 LIKNRRRKLAFKVV--VQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGV 218
L R+ F V+ V + +A G+ YL VHRD+ N+L++ N K++DFG+
Sbjct: 137 L---RKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL 193
Query: 219 ARVEASNPNDMTGETG---TLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYPD 274
RV +P G + + +PE + + DV+S+GI LWE+ + PY +
Sbjct: 194 GRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE 253
Query: 275 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTSKG 334
+S +V A V + R P CP++L +M CW + + RP+ +++VS+L+ + + G
Sbjct: 254 MSNQDVIKA-VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPG 312
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 142/295 (48%), Gaps = 35/295 (11%)
Query: 44 DWEIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRS--AF 101
+WE+ K+ + + +G+FG V+ G+ G VK +T E A++R F
Sbjct: 41 EWEVAREKITMSRELGQGSFGMVYEGVAKG---VVKDEPETRVAIKTVNEAASMRERIEF 97
Query: 102 TQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYL 161
E +V + + +V + +G GQ + V++E + G LK+YL
Sbjct: 98 LNEASVMKEFNCHHVVRLLGVV----------SQGQPTL------VIMELMTRGDLKSYL 141
Query: 162 IKNRRRKL---------AFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVK 212
++ R ++ + ++Q+A ++A G++YL++ K VHRD+ N ++ ++ TVK
Sbjct: 142 -RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVK 200
Query: 213 IADFGVARVEASNPNDMTGETGTL--GYMAPEVLNGNPYNRKCDVYSFGICLWEI-YCCD 269
I DFG+ R G G L +M+PE L + DV+SFG+ LWEI +
Sbjct: 201 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 260
Query: 270 MPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVS 324
PY LS +V V+ L + P CP L +M+ CW NP RP E++S
Sbjct: 261 QPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 314
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 142/295 (48%), Gaps = 35/295 (11%)
Query: 44 DWEIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRS--AF 101
+WE+ K+ + + +G+FG V+ G+ G VK +T E A++R F
Sbjct: 19 EWEVAREKITMSRELGQGSFGMVYEGVAKG---VVKDEPETRVAIKTVNEAASMRERIEF 75
Query: 102 TQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYL 161
E +V + + +V + +G GQ + V++E + G LK+YL
Sbjct: 76 LNEASVMKEFNCHHVVRLLGVV----------SQGQPTL------VIMELMTRGDLKSYL 119
Query: 162 IKNRRRKL---------AFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVK 212
++ R ++ + ++Q+A ++A G++YL++ K VHRD+ N ++ ++ TVK
Sbjct: 120 -RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVK 178
Query: 213 IADFGVARVEASNPNDMTGETGTLG--YMAPEVLNGNPYNRKCDVYSFGICLWEI-YCCD 269
I DFG+ R G G L +M+PE L + DV+SFG+ LWEI +
Sbjct: 179 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 238
Query: 270 MPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVS 324
PY LS +V V+ L + P CP L +M+ CW NP RP E++S
Sbjct: 239 QPYQGLSNEQVLRFVMEGGLL-DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 292
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 137/300 (45%), Gaps = 31/300 (10%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHD-VAVKLLDWGEEGHRTEAEIAALRSAFTQ 103
WEI L ++ + +G FG V G ++G VA+K L G AF Q
Sbjct: 180 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSP----------EAFLQ 229
Query: 104 EVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIK 163
E V KL H + + A + ++I V EY+ G+L +L
Sbjct: 230 EAQVMKKLRHEKLVQLY-AVVSEEPIYI----------------VTEYMSKGSLLDFLKG 272
Query: 164 NRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR-VE 222
+ L +V +A +A G++Y+ VHRD++ N+L+ +N K+ADFG+ R +E
Sbjct: 273 EMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLGRLIE 332
Query: 223 ASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSEVT 281
+ G + + APE + K DV+SFGI L E+ +PYP + EV
Sbjct: 333 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 392
Query: 282 SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTSKGGGMIPGD 341
V R R P CP SL ++M +CW +P++RP + + + LE TS PG+
Sbjct: 393 DQVER-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQXQPGE 451
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 144/296 (48%), Gaps = 39/296 (13%)
Query: 46 EIEPSKLVIKSVIARGTFGTV---HRGLYDGHD--VAVKLLDWGEEGHRTEAEIAALRSA 100
EI+ S + I+ VI G FG V H L + VA+K L G TE + R
Sbjct: 29 EIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSG----YTEKQ----RRD 80
Query: 101 FTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTY 160
F E ++ + DHPNV G S+ + I + E++ G+L ++
Sbjct: 81 FLSEASIMGQFDHPNVIHLEGVVTKSTPVMI----------------ITEFMENGSLDSF 124
Query: 161 LIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR 220
L +N + ++V L +A G+ YL VHRD+ N+L++ N K++DFG++R
Sbjct: 125 LRQNDGQFTVIQLVGMLR-GIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSR 183
Query: 221 VEASNPNDMTGETGTLG------YMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYP 273
+ +D T T LG + APE + + DV+S+GI +WE+ + PY
Sbjct: 184 FLEDDTSDPT-YTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYW 242
Query: 274 DLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAI 329
D++ +V +A + Q+ R P CPS+L +M CW + + RP+ ++V+ L+ +
Sbjct: 243 DMTNQDVINA-IEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKM 297
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 137/300 (45%), Gaps = 31/300 (10%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHD-VAVKLLDWGEEGHRTEAEIAALRSAFTQ 103
WEI L ++ + +G FG V G ++G VA+K L G AF Q
Sbjct: 179 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG----------TMSPEAFLQ 228
Query: 104 EVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIK 163
E V KL H + + A + ++I V EY+ G+L +L
Sbjct: 229 EAQVMKKLRHEKLVQLY-AVVSEEPIYI----------------VGEYMSKGSLLDFLKG 271
Query: 164 NRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR-VE 222
+ L +V +A +A G++Y+ VHRD++ N+L+ +N K+ADFG+AR +E
Sbjct: 272 ETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 331
Query: 223 ASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSEVT 281
+ G + + APE + K DV+SFGI L E+ +PYP + EV
Sbjct: 332 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 391
Query: 282 SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTSKGGGMIPGD 341
V R R P CP SL ++M +CW P++RP + + + LE TS PG+
Sbjct: 392 DQVER-GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQXQPGE 450
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 141/297 (47%), Gaps = 33/297 (11%)
Query: 44 DWEIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRS--AF 101
+WE+ K+ + + +G+FG V+ G + D+ +K +T E A+LR F
Sbjct: 11 EWEVSREKITLLRELGQGSFGMVYEG--NARDI-IKGEAETRVAVKTVNESASLRERIEF 67
Query: 102 TQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYL 161
E +V +V + +G GQ + VV+E + G LK+YL
Sbjct: 68 LNEASVMKGFTCHHVVRLLGVV----------SKGQPTL------VVMELMAHGDLKSYL 111
Query: 162 IKNR--------RRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKI 213
R R + ++Q+A ++A G++YL+++K VHRD+ N ++ + TVKI
Sbjct: 112 RSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKI 171
Query: 214 ADFGVARVEASNPNDMTGETGTLG--YMAPEVLNGNPYNRKCDVYSFGICLWEIYC-CDM 270
DFG+ R G G L +MAPE L + D++SFG+ LWEI +
Sbjct: 172 GDFGMTRDIYETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQ 231
Query: 271 PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLE 327
PY LS +V V+ + P CP + ++M+ CW NP RP E+V++L+
Sbjct: 232 PYQGLSNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 141/295 (47%), Gaps = 39/295 (13%)
Query: 46 EIEPSKLVIKSVIARGTFGTVHRG---LYDGHDVAV--KLLDWGEEGHRTEAEIAALRSA 100
E++ S + I+ VI G FG V G L DVAV K L G TE + R
Sbjct: 39 ELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVG----YTEKQ----RRD 90
Query: 101 FTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTY 160
F E ++ + DHPNV G G+ M +V+E++ GAL +
Sbjct: 91 FLCEASIMGQFDHPNVVHLEGVVT----------RGKPVM------IVIEFMENGALDAF 134
Query: 161 LIKNRRRKLAFKVV--VQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGV 218
L R+ F V+ V + +A G+ YL VHRD+ N+L++ N K++DFG+
Sbjct: 135 L---RKHDGQFTVIQLVGMLRGIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGL 191
Query: 219 ARVEASNPNDMTGETG---TLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYPD 274
+RV +P + TG + + APE + + DV+S+GI +WE+ + PY D
Sbjct: 192 SRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWD 251
Query: 275 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAI 329
+S +V A + + R P CP+ L +M CW +RP+ +++V +L+ +
Sbjct: 252 MSNQDVIKA-IEEGYRLPAPMDCPAGLHQLMLDCWQKERAERPKFEQIVGILDKM 305
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 140/311 (45%), Gaps = 50/311 (16%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHD---------VAVKLLDWGEEGHRTEAEIA 95
WE+ +LV+ + G FG V G D VAVK+L + TE +++
Sbjct: 12 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML----KSDATEKDLS 67
Query: 96 ALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGG 155
L S + H N+ +GA L+ V+VEY G
Sbjct: 68 DLISEMEMMKMIGK---HKNIINLLGACTQDGPLY----------------VIVEYASKG 108
Query: 156 ALKTYLIKNR--------------RRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTE 201
L+ YL R +L+ K +V A +ARG+ YL S+K +HRD+
Sbjct: 109 NLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAAR 168
Query: 202 NMLLDKNRTVKIADFGVAR--VEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFG 259
N+L+ ++ +KIADFG+AR T + +MAPE L Y + DV+SFG
Sbjct: 169 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG 228
Query: 260 ICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPE 318
+ LWEI+ PYP + E+ ++++ R + P C + L +M+ CW A P +RP
Sbjct: 229 VLLWEIFTLGGSPYPGVPVEELFK-LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPT 287
Query: 319 MDEVVSMLEAI 329
++V L+ I
Sbjct: 288 FKQLVEDLDRI 298
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 137/300 (45%), Gaps = 31/300 (10%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHD-VAVKLLDWGEEGHRTEAEIAALRSAFTQ 103
WEI L ++ + +G FG V G ++G VA+K L G AF Q
Sbjct: 10 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP----------EAFLQ 59
Query: 104 EVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIK 163
E V KL H + + A + ++I V EY+ G+L +L
Sbjct: 60 EAQVMKKLRHEKLVQLY-AVVSEEPIYI----------------VTEYMNKGSLLDFLKG 102
Query: 164 NRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR-VE 222
+ L +V ++ +A G++Y+ VHRD++ N+L+ +N K+ADFG+AR +E
Sbjct: 103 ETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 162
Query: 223 ASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSEVT 281
+ G + + APE + K DV+SFGI L E+ +PYP + EV
Sbjct: 163 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 222
Query: 282 SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTSKGGGMIPGD 341
V R R P CP SL ++M +CW P++RP + + + LE TS PG+
Sbjct: 223 DQVER-GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPGE 281
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 137/305 (44%), Gaps = 38/305 (12%)
Query: 34 ASNFLKKQRQDWEIEPSKLVIKSVIARGTFGTVHRGLYDGH-----DVAVKLLDWGEEGH 88
+S + + + I +V+ ++ G FG V+ G+Y H +VAVK
Sbjct: 8 SSGLVPRGSPQYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVK--------- 58
Query: 89 RTEAEIAAL--RSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICC 146
T + L + F E + LDHP++ K IG I+ E + M
Sbjct: 59 -TCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGI--------IEEEPTWIIM------ 103
Query: 147 VVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLD 206
E P G L YL +N+ L +V +L + + ++YL S VHRD+ N+L+
Sbjct: 104 ---ELYPYGELGHYLERNKN-SLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVA 159
Query: 207 KNRTVKIADFGVAR-VEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEI 265
VK+ DFG++R +E + + + +M+PE +N + DV+ F +C+WEI
Sbjct: 160 SPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEI 219
Query: 266 YCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVS 324
P+ L +V + + + P+ P CP L +M RCWD +P RP E+V
Sbjct: 220 LSFGKQPFFWLENKDVIGVLEKGDRLPK-PDLCPPVLYTLMTRCWDYDPSDRPRFTELVC 278
Query: 325 MLEAI 329
L +
Sbjct: 279 SLSDV 283
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 140/311 (45%), Gaps = 50/311 (16%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHD---------VAVKLLDWGEEGHRTEAEIA 95
WE+ +LV+ + G FG V G D VAVK+L + TE +++
Sbjct: 15 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML----KSDATEKDLS 70
Query: 96 ALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGG 155
L S + H N+ +GA L+ V+VEY G
Sbjct: 71 DLISEMEMMKMIGK---HKNIINLLGACTQDGPLY----------------VIVEYASKG 111
Query: 156 ALKTYLIKNR--------------RRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTE 201
L+ YL R +L+ K +V A +ARG+ YL S+K +HRD+
Sbjct: 112 NLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAAR 171
Query: 202 NMLLDKNRTVKIADFGVAR--VEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFG 259
N+L+ ++ +KIADFG+AR T + +MAPE L Y + DV+SFG
Sbjct: 172 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG 231
Query: 260 ICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPE 318
+ LWEI+ PYP + E+ ++++ R + P C + L +M+ CW A P +RP
Sbjct: 232 VLLWEIFTLGGSPYPGVPVEELFK-LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPT 290
Query: 319 MDEVVSMLEAI 329
++V L+ I
Sbjct: 291 FKQLVEDLDRI 301
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 129/306 (42%), Gaps = 46/306 (15%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHD-------VAVKLLDWGEEGHRTEAEIAAL 97
WE +L + + RG FG V G D VAVK+L G T +E AL
Sbjct: 13 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA----THSEHRAL 68
Query: 98 RSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGAL 157
S + + H H NV +GA P V+ E+ G L
Sbjct: 69 MSELKILIHIGH---HLNVVNLLGA---------------CTKPGGPLMVITEFCKFGNL 110
Query: 158 KTYLIKNRRRKLAFKV--------------VVQLALDLARGLSYLHSQKIVHRDVKTENM 203
TYL R + +KV ++ + +A+G+ +L S+K +HRD+ N+
Sbjct: 111 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNI 170
Query: 204 LLDKNRTVKIADFGVARVEASNPNDMTGETGT--LGYMAPEVLNGNPYNRKCDVYSFGIC 261
LL + VKI DFG+AR +P+ + L +MAPE + Y + DV+SFG+
Sbjct: 171 LLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVL 230
Query: 262 LWEIYCCDM-PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMD 320
LWEI+ PYP + E +++ R P + M CW P +RP
Sbjct: 231 LWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFS 290
Query: 321 EVVSML 326
E+V L
Sbjct: 291 ELVEHL 296
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 136/300 (45%), Gaps = 31/300 (10%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGH-DVAVKLLDWGEEGHRTEAEIAALRSAFTQ 103
WEI L + + G FG V G ++G+ VA+K L G +F +
Sbjct: 4 WEIPRESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTLKPG----------TMSPESFLE 53
Query: 104 EVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIK 163
E + KL H + + A + ++I V EY+ G+L +L
Sbjct: 54 EAQIMKKLKHDKLVQLY-AVVSEEPIYI----------------VTEYMNKGSLLDFLKD 96
Query: 164 NRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR-VE 222
R L +V +A +A G++Y+ +HRD+++ N+L+ KIADFG+AR +E
Sbjct: 97 GEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGNGLICKIADFGLARLIE 156
Query: 223 ASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSEVT 281
+ G + + APE + K DV+SFGI L E+ +PYP ++ EV
Sbjct: 157 DNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVL 216
Query: 282 SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTSKGGGMIPGD 341
V R R P+ CP SL +M CW +P++RP + + S LE T+ PG+
Sbjct: 217 EQVER-GYRMPCPQDCPISLHELMIHCWKKDPEERPTFEYLQSFLEDYFTATEPQYQPGE 275
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 140/311 (45%), Gaps = 50/311 (16%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHD---------VAVKLLDWGEEGHRTEAEIA 95
WE+ +LV+ + G FG V G D VAVK+L + TE +++
Sbjct: 23 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML----KSDATEKDLS 78
Query: 96 ALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGG 155
L S + H N+ +GA L+ V+VEY G
Sbjct: 79 DLISEMEMMKMIGK---HKNIINLLGACTQDGPLY----------------VIVEYASKG 119
Query: 156 ALKTYLIKNR--------------RRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTE 201
L+ YL R +L+ K +V A +ARG+ YL S+K +HRD+
Sbjct: 120 NLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAAR 179
Query: 202 NMLLDKNRTVKIADFGVAR--VEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFG 259
N+L+ ++ +KIADFG+AR T + +MAPE L Y + DV+SFG
Sbjct: 180 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG 239
Query: 260 ICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPE 318
+ LWEI+ PYP + E+ ++++ R + P C + L +M+ CW A P +RP
Sbjct: 240 VLLWEIFTLGGSPYPGVPVEELFK-LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPT 298
Query: 319 MDEVVSMLEAI 329
++V L+ I
Sbjct: 299 FKQLVEDLDRI 309
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 133/317 (41%), Gaps = 42/317 (13%)
Query: 30 PIGKASNFLKKQRQDWEIEPSKLVIKSVIARGTFGTVHRGLYDGHD-------VAVKLLD 82
P+ + L WE +L + + RG FG V G D VAVK+L
Sbjct: 7 PLDEHCERLPYDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLK 66
Query: 83 WGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPS 142
G T +E AL S + + H H NV +GA P
Sbjct: 67 EGA----THSEHRALMSELKILIHIGH---HLNVVNLLGA---------------CTKPG 104
Query: 143 NICCVVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDL----------ARGLSYLHSQK 192
V+VE+ G L TYL R + +K + + L L A+G+ +L S+K
Sbjct: 105 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFLASRK 164
Query: 193 IVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETGT--LGYMAPEVLNGNPYN 250
+HRD+ N+LL + VKI DFG+AR +P+ + L +MAPE + Y
Sbjct: 165 XIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYT 224
Query: 251 RKCDVYSFGICLWEIYCCDM-PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCW 309
+ DV+SFG+ LWEI+ PYP + E +++ R P + M CW
Sbjct: 225 IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCW 284
Query: 310 DANPDKRPEMDEVVSML 326
P +RP E+V L
Sbjct: 285 HGEPSQRPTFSELVEHL 301
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 137/300 (45%), Gaps = 31/300 (10%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHD-VAVKLLDWGEEGHRTEAEIAALRSAFTQ 103
WEI L ++ + +G FG V G ++G VA+K L G AF Q
Sbjct: 10 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP----------EAFLQ 59
Query: 104 EVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIK 163
E V KL H + + A + ++I V EY+ G+L +L
Sbjct: 60 EAQVMKKLRHEKLVQLY-AVVSEEPIYI----------------VTEYMNKGSLLDFLKG 102
Query: 164 NRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR-VE 222
+ L +V ++ +A G++Y+ VHRD++ N+L+ +N K+ADFG+AR +E
Sbjct: 103 ETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 162
Query: 223 ASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSEVT 281
+ G + + APE + K DV+SFGI L E+ +PYP + EV
Sbjct: 163 DNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 222
Query: 282 SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTSKGGGMIPGD 341
V R R P CP SL ++M +CW P++RP + + + LE TS PG+
Sbjct: 223 DQVER-GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPGE 281
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 140/311 (45%), Gaps = 50/311 (16%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHD---------VAVKLLDWGEEGHRTEAEIA 95
WE+ +LV+ + G FG V G D VAVK+L + TE +++
Sbjct: 8 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML----KSDATEKDLS 63
Query: 96 ALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGG 155
L S + H N+ +GA L+ V+VEY G
Sbjct: 64 DLISEMEMMKMIGK---HKNIINLLGACTQDGPLY----------------VIVEYASKG 104
Query: 156 ALKTYLIKNR--------------RRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTE 201
L+ YL R +L+ K +V A +ARG+ YL S+K +HRD+
Sbjct: 105 NLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAAR 164
Query: 202 NMLLDKNRTVKIADFGVAR--VEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFG 259
N+L+ ++ +KIADFG+AR T + +MAPE L Y + DV+SFG
Sbjct: 165 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG 224
Query: 260 ICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPE 318
+ LWEI+ PYP + E+ ++++ R + P C + L +M+ CW A P +RP
Sbjct: 225 VLLWEIFTLGGSPYPGVPVEELFK-LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPT 283
Query: 319 MDEVVSMLEAI 329
++V L+ I
Sbjct: 284 FKQLVEDLDRI 294
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 141/297 (47%), Gaps = 33/297 (11%)
Query: 44 DWEIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRS--AF 101
+WE+ K+ + + +G+FG V+ G + D+ +K +T E A+LR F
Sbjct: 11 EWEVSREKITLLRELGQGSFGMVYEG--NARDI-IKGEAETRVAVKTVNESASLRERIEF 67
Query: 102 TQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYL 161
E +V +V + +G GQ + VV+E + G LK+YL
Sbjct: 68 LNEASVMKGFTCHHVVRLLGVV----------SKGQPTL------VVMELMAHGDLKSYL 111
Query: 162 IKNR--------RRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKI 213
R R + ++Q+A ++A G++YL+++K VHRD+ N ++ + TVKI
Sbjct: 112 RSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKI 171
Query: 214 ADFGVARVEASNPNDMTGETGTLG--YMAPEVLNGNPYNRKCDVYSFGICLWEIYC-CDM 270
DFG+ R G G L +MAPE L + D++SFG+ LWEI +
Sbjct: 172 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQ 231
Query: 271 PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLE 327
PY LS +V V+ + P CP + ++M+ CW NP RP E+V++L+
Sbjct: 232 PYQGLSNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 137/296 (46%), Gaps = 34/296 (11%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGH-DVAVKLLDWGEEGHRTEAEIAALRSAFTQ 103
WEI + + + G FG V G Y+ VAVK L G + AF +
Sbjct: 7 WEIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQ----------AFLE 56
Query: 104 EVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIK 163
E + L H + + ++I + E++ G+L +L
Sbjct: 57 EANLMKTLQHDKLVRLYAVVTKEEPIYI----------------ITEFMAKGSLLDFLKS 100
Query: 164 NRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEA 223
+ K+ ++ + +A G++Y+ + +HRD++ N+L+ ++ KIADFG+ARV
Sbjct: 101 DEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARV-- 158
Query: 224 SNPNDMTGETGT---LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSE 279
N+ T G + + APE +N + K +V+SFGI L+EI +PYP + ++
Sbjct: 159 IEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNAD 218
Query: 280 VTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTSKGG 335
V SA+ + P + CP L ++MK CW ++RP D + S+L+ T+ G
Sbjct: 219 VMSALSQGYRMPRMEN-CPDELYDIMKMCWKEKAEERPTFDYLQSVLDDFYTATEG 273
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 140/311 (45%), Gaps = 50/311 (16%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHD---------VAVKLLDWGEEGHRTEAEIA 95
WE+ +LV+ + G FG V G D VAVK+L + TE +++
Sbjct: 64 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML----KSDATEKDLS 119
Query: 96 ALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGG 155
L S + H N+ +GA L+ V+VEY G
Sbjct: 120 DLISEMEMMKMIGK---HKNIINLLGACTQDGPLY----------------VIVEYASKG 160
Query: 156 ALKTYLIKNR--------------RRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTE 201
L+ YL R +L+ K +V A +ARG+ YL S+K +HRD+
Sbjct: 161 NLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAAR 220
Query: 202 NMLLDKNRTVKIADFGVAR--VEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFG 259
N+L+ ++ +KIADFG+AR T + +MAPE L Y + DV+SFG
Sbjct: 221 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG 280
Query: 260 ICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPE 318
+ LWEI+ PYP + E+ ++++ R + P C + L +M+ CW A P +RP
Sbjct: 281 VLLWEIFTLGGSPYPGVPVEELFK-LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPT 339
Query: 319 MDEVVSMLEAI 329
++V L+ I
Sbjct: 340 FKQLVEDLDRI 350
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 140/311 (45%), Gaps = 50/311 (16%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHD---------VAVKLLDWGEEGHRTEAEIA 95
WE+ +LV+ + G FG V G D VAVK+L + TE +++
Sbjct: 23 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML----KSDATEKDLS 78
Query: 96 ALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGG 155
L S + H N+ +GA L+ V+VEY G
Sbjct: 79 DLISEMEMMKMIGK---HKNIINLLGACTQDGPLY----------------VIVEYASKG 119
Query: 156 ALKTYLIKNR--------------RRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTE 201
L+ YL R +L+ K +V A +ARG+ YL S+K +HRD+
Sbjct: 120 NLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAAR 179
Query: 202 NMLLDKNRTVKIADFGVAR--VEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFG 259
N+L+ ++ +KIADFG+AR T + +MAPE L Y + DV+SFG
Sbjct: 180 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG 239
Query: 260 ICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPE 318
+ LWEI+ PYP + E+ ++++ R + P C + L +M+ CW A P +RP
Sbjct: 240 VLLWEIFTLGGSPYPGVPVEELFK-LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPT 298
Query: 319 MDEVVSMLEAI 329
++V L+ I
Sbjct: 299 FKQLVEDLDRI 309
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 140/311 (45%), Gaps = 50/311 (16%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHD---------VAVKLLDWGEEGHRTEAEIA 95
WE+ +LV+ + G FG V G D VAVK+L + TE +++
Sbjct: 16 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML----KSDATEKDLS 71
Query: 96 ALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGG 155
L S + H N+ +GA L+ V+VEY G
Sbjct: 72 DLISEMEMMKMIGK---HKNIINLLGACTQDGPLY----------------VIVEYASKG 112
Query: 156 ALKTYLIKNR--------------RRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTE 201
L+ YL R +L+ K +V A +ARG+ YL S+K +HRD+
Sbjct: 113 NLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAAR 172
Query: 202 NMLLDKNRTVKIADFGVAR--VEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFG 259
N+L+ ++ +KIADFG+AR T + +MAPE L Y + DV+SFG
Sbjct: 173 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG 232
Query: 260 ICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPE 318
+ LWEI+ PYP + E+ ++++ R + P C + L +M+ CW A P +RP
Sbjct: 233 VLLWEIFTLGGSPYPGVPVEELFK-LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPT 291
Query: 319 MDEVVSMLEAI 329
++V L+ I
Sbjct: 292 FKQLVEDLDRI 302
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 140/311 (45%), Gaps = 50/311 (16%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHD---------VAVKLLDWGEEGHRTEAEIA 95
WE+ +LV+ + G FG V G D VAVK+L + TE +++
Sbjct: 23 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML----KSDATEKDLS 78
Query: 96 ALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGG 155
L S + H N+ +GA L+ V+VEY G
Sbjct: 79 DLISEMEMMKMIGK---HKNIINLLGACTQDGPLY----------------VIVEYASKG 119
Query: 156 ALKTYL--------------IKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTE 201
L+ YL N +L+ K +V A +ARG+ YL S+K +HRD+
Sbjct: 120 NLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAAR 179
Query: 202 NMLLDKNRTVKIADFGVAR--VEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFG 259
N+L+ ++ +KIADFG+AR T + +MAPE L Y + DV+SFG
Sbjct: 180 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG 239
Query: 260 ICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPE 318
+ LWEI+ PYP + E+ ++++ R + P C + L +M+ CW A P +RP
Sbjct: 240 VLLWEIFTLGGSPYPGVPVEELFK-LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPT 298
Query: 319 MDEVVSMLEAI 329
++V L+ I
Sbjct: 299 FKQLVEDLDRI 309
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 141/295 (47%), Gaps = 35/295 (11%)
Query: 44 DWEIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRS--AF 101
+WE+ K+ + + +G+FG V+ G+ G VK +T E A++R F
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKG---VVKDEPETRVAIKTVNEAASMRERIEF 62
Query: 102 TQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYL 161
E +V + + +V + +G GQ + V++E + G LK+YL
Sbjct: 63 LNEASVMKEFNCHHVVRLLGVV----------SQGQPTL------VIMELMTRGDLKSYL 106
Query: 162 IKNRRRKL---------AFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVK 212
++ R ++ + ++Q+A ++A G++YL++ K VHRD+ N + ++ TVK
Sbjct: 107 -RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCXVAEDFTVK 165
Query: 213 IADFGVARVEASNPNDMTGETGTLG--YMAPEVLNGNPYNRKCDVYSFGICLWEI-YCCD 269
I DFG+ R G G L +M+PE L + DV+SFG+ LWEI +
Sbjct: 166 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 225
Query: 270 MPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVS 324
PY LS +V V+ L + P CP L +M+ CW NP RP E++S
Sbjct: 226 QPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLLELMRMCWQYNPKMRPSFLEIIS 279
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 131/287 (45%), Gaps = 38/287 (13%)
Query: 52 LVIKSVIARGTFGTVHRGLYDGH-----DVAVKLLDWGEEGHRTEAEIAAL--RSAFTQE 104
+V+ ++ G FG V+ G+Y H +VAVK T + L + F E
Sbjct: 14 VVLNRILGEGFFGEVYEGVYTNHKGEKINVAVK----------TCKKDCTLDNKEKFMSE 63
Query: 105 VAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKN 164
+ LDHP++ K IG I+ E + M E P G L YL +N
Sbjct: 64 AVIMKNLDHPHIVKLIGI--------IEEEPTWIIM---------ELYPYGELGHYLERN 106
Query: 165 RRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR-VEA 223
+ L +V +L + + ++YL S VHRD+ N+L+ VK+ DFG++R +E
Sbjct: 107 KN-SLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIED 165
Query: 224 SNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTS 282
+ + + +M+PE +N + DV+ F +C+WEI P+ L +V
Sbjct: 166 EDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIG 225
Query: 283 AVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAI 329
+ + + P+ P CP L +M RCWD +P RP E+V L +
Sbjct: 226 VLEKGDRLPK-PDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDV 271
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 137/313 (43%), Gaps = 53/313 (16%)
Query: 43 QDWEIEPSKLVIKSVIARGTFGTVHRGLYDG-------HDVAVKLLDWGEEGHRTEAEIA 95
WE ++L + G FG V G VAVK+L H TE
Sbjct: 39 HKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK--PSAHLTE---- 92
Query: 96 ALRSAFTQEVAVWHKL-DHPNVTKFIGA-TMGSSELHIQTENGQVAMPSNICCVVVEYLP 153
R A E+ V L +H N+ +GA T+G L V+ EY
Sbjct: 93 --REALMSELKVLSYLGNHMNIVNLLGACTIGGPTL-----------------VITEYCC 133
Query: 154 GGALKTYLIKNRRRKLAFKV----------------VVQLALDLARGLSYLHSQKIVHRD 197
G L +L + R + K ++ + +A+G+++L S+ +HRD
Sbjct: 134 YGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRD 193
Query: 198 VKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETGTL--GYMAPEVLNGNPYNRKCDV 255
+ N+LL R KI DFG+AR ++ N + L +MAPE + Y + DV
Sbjct: 194 LAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDV 253
Query: 256 YSFGICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPD 314
+S+GI LWE++ PYP + ++++ R P P+ + ++MK CWDA+P
Sbjct: 254 WSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPL 313
Query: 315 KRPEMDEVVSMLE 327
KRP ++V ++E
Sbjct: 314 KRPTFKQIVQLIE 326
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 137/313 (43%), Gaps = 53/313 (16%)
Query: 43 QDWEIEPSKLVIKSVIARGTFGTVHRGLYDG-------HDVAVKLLDWGEEGHRTEAEIA 95
WE ++L + G FG V G VAVK+L H TE
Sbjct: 16 HKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK--PSAHLTE---- 69
Query: 96 ALRSAFTQEVAVWHKL-DHPNVTKFIGA-TMGSSELHIQTENGQVAMPSNICCVVVEYLP 153
R A E+ V L +H N+ +GA T+G L V+ EY
Sbjct: 70 --REALMSELKVLSYLGNHMNIVNLLGACTIGGPTL-----------------VITEYCC 110
Query: 154 GGALKTYLIKNRRRKLAFKV----------------VVQLALDLARGLSYLHSQKIVHRD 197
G L +L + R + K ++ + +A+G+++L S+ +HRD
Sbjct: 111 YGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRD 170
Query: 198 VKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETGTL--GYMAPEVLNGNPYNRKCDV 255
+ N+LL R KI DFG+AR ++ N + L +MAPE + Y + DV
Sbjct: 171 LAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDV 230
Query: 256 YSFGICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPD 314
+S+GI LWE++ PYP + ++++ R P P+ + ++MK CWDA+P
Sbjct: 231 WSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPL 290
Query: 315 KRPEMDEVVSMLE 327
KRP ++V ++E
Sbjct: 291 KRPTFKQIVQLIE 303
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 131/287 (45%), Gaps = 38/287 (13%)
Query: 52 LVIKSVIARGTFGTVHRGLYDGH-----DVAVKLLDWGEEGHRTEAEIAAL--RSAFTQE 104
+V+ ++ G FG V+ G+Y H +VAVK T + L + F E
Sbjct: 10 VVLNRILGEGFFGEVYEGVYTNHKGEKINVAVK----------TCKKDCTLDNKEKFMSE 59
Query: 105 VAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKN 164
+ LDHP++ K IG I+ E + M E P G L YL +N
Sbjct: 60 AVIMKNLDHPHIVKLIGI--------IEEEPTWIIM---------ELYPYGELGHYLERN 102
Query: 165 RRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR-VEA 223
+ L +V +L + + ++YL S VHRD+ N+L+ VK+ DFG++R +E
Sbjct: 103 KN-SLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIED 161
Query: 224 SNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTS 282
+ + + +M+PE +N + DV+ F +C+WEI P+ L +V
Sbjct: 162 EDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIG 221
Query: 283 AVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAI 329
+ + + P+ P CP L +M RCWD +P RP E+V L +
Sbjct: 222 VLEKGDRLPK-PDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDV 267
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 134/288 (46%), Gaps = 32/288 (11%)
Query: 47 IEPSKLVIKSVIARGTFGTVHRGLYDG-HDVAVKLLDWGEEGHRTEAEIAALRSAFTQEV 105
I+P L + G FG V G + G +DVA+K++ +EG +E E F +E
Sbjct: 1 IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMI---KEGSMSEDE-------FIEEA 50
Query: 106 AVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNR 165
V L H + + G + I + EY+ G L YL +
Sbjct: 51 KVMMNLSHEKLVQLYGVCTKQRPIFI----------------ITEYMANGCLLNYL-REM 93
Query: 166 RRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR-VEAS 224
R + + ++++ D+ + YL S++ +HRD+ N L++ VK++DFG++R V
Sbjct: 94 RHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD 153
Query: 225 NPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSA 283
G + + PEVL + ++ K D+++FG+ +WEIY MPY + SE T+
Sbjct: 154 EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE-TAE 212
Query: 284 VVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVS-MLEAID 330
+ Q LR P + +M CW D+RP ++S +L+ +D
Sbjct: 213 HIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 260
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 137/313 (43%), Gaps = 53/313 (16%)
Query: 43 QDWEIEPSKLVIKSVIARGTFGTVHRGLYDG-------HDVAVKLLDWGEEGHRTEAEIA 95
WE ++L + G FG V G VAVK+L H TE
Sbjct: 32 HKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK--PSAHLTE---- 85
Query: 96 ALRSAFTQEVAVWHKL-DHPNVTKFIGA-TMGSSELHIQTENGQVAMPSNICCVVVEYLP 153
R A E+ V L +H N+ +GA T+G L V+ EY
Sbjct: 86 --REALMSELKVLSYLGNHMNIVNLLGACTIGGPTL-----------------VITEYCC 126
Query: 154 GGALKTYLIKNRRRKLAFKV----------------VVQLALDLARGLSYLHSQKIVHRD 197
G L +L + R + K ++ + +A+G+++L S+ +HRD
Sbjct: 127 YGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRD 186
Query: 198 VKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETGTL--GYMAPEVLNGNPYNRKCDV 255
+ N+LL R KI DFG+AR ++ N + L +MAPE + Y + DV
Sbjct: 187 LAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDV 246
Query: 256 YSFGICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPD 314
+S+GI LWE++ PYP + ++++ R P P+ + ++MK CWDA+P
Sbjct: 247 WSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPL 306
Query: 315 KRPEMDEVVSMLE 327
KRP ++V ++E
Sbjct: 307 KRPTFKQIVQLIE 319
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 137/313 (43%), Gaps = 53/313 (16%)
Query: 43 QDWEIEPSKLVIKSVIARGTFGTVHRGLYDG-------HDVAVKLLDWGEEGHRTEAEIA 95
WE ++L + G FG V G VAVK+L H TE
Sbjct: 39 HKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK--PSAHLTE---- 92
Query: 96 ALRSAFTQEVAVWHKL-DHPNVTKFIGA-TMGSSELHIQTENGQVAMPSNICCVVVEYLP 153
R A E+ V L +H N+ +GA T+G L V+ EY
Sbjct: 93 --REALMSELKVLSYLGNHMNIVNLLGACTIGGPTL-----------------VITEYCC 133
Query: 154 GGALKTYLIKNRRRKLAFKV----------------VVQLALDLARGLSYLHSQKIVHRD 197
G L +L + R + K ++ + +A+G+++L S+ +HRD
Sbjct: 134 YGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRD 193
Query: 198 VKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETGTL--GYMAPEVLNGNPYNRKCDV 255
+ N+LL R KI DFG+AR ++ N + L +MAPE + Y + DV
Sbjct: 194 LAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDV 253
Query: 256 YSFGICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPD 314
+S+GI LWE++ PYP + ++++ R P P+ + ++MK CWDA+P
Sbjct: 254 WSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPL 313
Query: 315 KRPEMDEVVSMLE 327
KRP ++V ++E
Sbjct: 314 KRPTFKQIVQLIE 326
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 118 bits (295), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 129/306 (42%), Gaps = 46/306 (15%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHD-------VAVKLLDWGEEGHRTEAEIAAL 97
WE +L + + RG FG V G D VAVK+L G T +E AL
Sbjct: 13 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA----THSEHRAL 68
Query: 98 RSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGAL 157
S + + H H NV +GA P V+ E+ G L
Sbjct: 69 MSELKILIHIGH---HLNVVNLLGA---------------CTKPGGPLMVITEFCKFGNL 110
Query: 158 KTYLIKNRRRKLAFKV--------------VVQLALDLARGLSYLHSQKIVHRDVKTENM 203
TYL R + +KV ++ + +A+G+ +L S+K +HRD+ N+
Sbjct: 111 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNI 170
Query: 204 LLDKNRTVKIADFGVARVEASNPNDMTGETGT--LGYMAPEVLNGNPYNRKCDVYSFGIC 261
LL + VKI DFG+AR +P+ + L +MAPE + Y + DV+SFG+
Sbjct: 171 LLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVL 230
Query: 262 LWEIYCCDM-PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMD 320
LWEI+ PYP + E +++ R P + M CW P +RP
Sbjct: 231 LWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFS 290
Query: 321 EVVSML 326
E+V L
Sbjct: 291 ELVEHL 296
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 118 bits (295), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 137/313 (43%), Gaps = 53/313 (16%)
Query: 43 QDWEIEPSKLVIKSVIARGTFGTVHRGLYDG-------HDVAVKLLDWGEEGHRTEAEIA 95
WE ++L + G FG V G VAVK+L H TE
Sbjct: 34 HKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK--PSAHLTE---- 87
Query: 96 ALRSAFTQEVAVWHKL-DHPNVTKFIGA-TMGSSELHIQTENGQVAMPSNICCVVVEYLP 153
R A E+ V L +H N+ +GA T+G L V+ EY
Sbjct: 88 --REALMSELKVLSYLGNHMNIVNLLGACTIGGPTL-----------------VITEYCC 128
Query: 154 GGALKTYLIKNRRRKLAFKV----------------VVQLALDLARGLSYLHSQKIVHRD 197
G L +L + R + K ++ + +A+G+++L S+ +HRD
Sbjct: 129 YGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRD 188
Query: 198 VKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETGTL--GYMAPEVLNGNPYNRKCDV 255
+ N+LL R KI DFG+AR ++ N + L +MAPE + Y + DV
Sbjct: 189 LAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDV 248
Query: 256 YSFGICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPD 314
+S+GI LWE++ PYP + ++++ R P P+ + ++MK CWDA+P
Sbjct: 249 WSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPL 308
Query: 315 KRPEMDEVVSMLE 327
KRP ++V ++E
Sbjct: 309 KRPTFKQIVQLIE 321
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 118 bits (295), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 129/306 (42%), Gaps = 46/306 (15%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHD-------VAVKLLDWGEEGHRTEAEIAAL 97
WE +L + + RG FG V G D VAVK+L G T +E AL
Sbjct: 13 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA----THSEHRAL 68
Query: 98 RSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGAL 157
S + + H H NV +GA P V+ E+ G L
Sbjct: 69 MSELKILIHIGH---HLNVVNLLGA---------------CTKPGGPLMVITEFCKFGNL 110
Query: 158 KTYLIKNRRRKLAFKV--------------VVQLALDLARGLSYLHSQKIVHRDVKTENM 203
TYL R + +KV ++ + +A+G+ +L S+K +HRD+ N+
Sbjct: 111 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNI 170
Query: 204 LLDKNRTVKIADFGVARVEASNPNDMTGETGT--LGYMAPEVLNGNPYNRKCDVYSFGIC 261
LL + VKI DFG+AR +P+ + L +MAPE + Y + DV+SFG+
Sbjct: 171 LLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVL 230
Query: 262 LWEIYCCDM-PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMD 320
LWEI+ PYP + E +++ R P + M CW P +RP
Sbjct: 231 LWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFS 290
Query: 321 EVVSML 326
E+V L
Sbjct: 291 ELVEHL 296
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 142/297 (47%), Gaps = 33/297 (11%)
Query: 44 DWEIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRS--AF 101
+WE+ K+ + + +G+FG V+ G + D+ +K +T E A+LR F
Sbjct: 11 EWEVSREKITLLRELGQGSFGMVYEG--NARDI-IKGEAETRVAVKTVNESASLRERIEF 67
Query: 102 TQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYL 161
E +V +V + +G GQ + VV+E + G LK+YL
Sbjct: 68 LNEASVMKGFTCHHVVRLLGVV----------SKGQPTL------VVMELMAHGDLKSYL 111
Query: 162 IKNR--------RRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKI 213
R R + ++Q+A ++A G++YL+++K VHR++ N ++ + TVKI
Sbjct: 112 RSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKI 171
Query: 214 ADFGVARVEASNPNDMTGETGTLG--YMAPEVLNGNPYNRKCDVYSFGICLWEIYC-CDM 270
DFG+ R G G L +MAPE L + D++SFG+ LWEI +
Sbjct: 172 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQ 231
Query: 271 PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLE 327
PY LS +V V+ + P CP + ++M+ CW NP+ RP E+V++L+
Sbjct: 232 PYQGLSNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 287
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 142/297 (47%), Gaps = 33/297 (11%)
Query: 44 DWEIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRS--AF 101
+WE+ K+ + + +G+FG V+ G + D+ +K +T E A+LR F
Sbjct: 12 EWEVSREKITLLRELGQGSFGMVYEG--NARDI-IKGEAETRVAVKTVNESASLRERIEF 68
Query: 102 TQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYL 161
E +V +V + +G GQ + VV+E + G LK+YL
Sbjct: 69 LNEASVMKGFTCHHVVRLLGVV----------SKGQPTL------VVMELMAHGDLKSYL 112
Query: 162 IKNR--------RRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKI 213
R R + ++Q+A ++A G++YL+++K VHR++ N ++ + TVKI
Sbjct: 113 RSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKI 172
Query: 214 ADFGVARVEASNPNDMTGETGTLG--YMAPEVLNGNPYNRKCDVYSFGICLWEIYC-CDM 270
DFG+ R G G L +MAPE L + D++SFG+ LWEI +
Sbjct: 173 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQ 232
Query: 271 PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLE 327
PY LS +V V+ + P CP + ++M+ CW NP+ RP E+V++L+
Sbjct: 233 PYQGLSNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 288
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 133/321 (41%), Gaps = 46/321 (14%)
Query: 30 PIGKASNFLKKQRQDWEIEPSKLVIKSVIARGTFGTVHRGLYDGHD-------VAVKLLD 82
P+ + L WE +L + + RG FG V G D VAVK+L
Sbjct: 9 PLDEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLK 68
Query: 83 WGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPS 142
G T +E AL S + + H H NV +GA P
Sbjct: 69 EGA----THSEHRALMSELKILIHIGH---HLNVVNLLGA---------------CTKPG 106
Query: 143 NICCVVVEYLPGGALKTYLIKNRRRKLAFKV--------------VVQLALDLARGLSYL 188
V+VE+ G L TYL R + +K ++ + +A+G+ +L
Sbjct: 107 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFL 166
Query: 189 HSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETG--TLGYMAPEVLNG 246
S+K +HRD+ N+LL + VKI DFG+AR +P+ + L +MAPE +
Sbjct: 167 ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD 226
Query: 247 NPYNRKCDVYSFGICLWEIYCCDM-PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVM 305
Y + DV+SFG+ LWEI+ PYP + E +++ R P + M
Sbjct: 227 RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTM 286
Query: 306 KRCWDANPDKRPEMDEVVSML 326
CW P +RP E+V L
Sbjct: 287 LDCWHGEPSQRPTFSELVEHL 307
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 140/300 (46%), Gaps = 39/300 (13%)
Query: 46 EIEPSKLVIKSVIARGTFGTVHRGLYD-----GHDVAVKLLDWGEEGHRTEAEIAALRSA 100
E++ + + I V+ G FG V G VA+K L G TE + R
Sbjct: 12 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG----YTEKQ----RRD 63
Query: 101 FTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTY 160
F E ++ + DHPN+ + G V S +V E + G+L ++
Sbjct: 64 FLGEASIMGQFDHPNIIRLEG----------------VVTKSKPVMIVTEXMENGSLDSF 107
Query: 161 LIKNRRRKLAFKVV--VQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGV 218
L R+ F V+ V + +A G+ YL VHRD+ N+L++ N K++DFG+
Sbjct: 108 L---RKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL 164
Query: 219 ARVEASNPNDMTGETG---TLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYPD 274
+RV +P G + + +PE + + DV+S+GI LWE+ + PY +
Sbjct: 165 SRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE 224
Query: 275 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTSKG 334
+S +V A V + R P CP++L +M CW + + RP+ +++VS+L+ + + G
Sbjct: 225 MSNQDVIKA-VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPG 283
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 140/300 (46%), Gaps = 39/300 (13%)
Query: 46 EIEPSKLVIKSVIARGTFGTVHRGLYD-----GHDVAVKLLDWGEEGHRTEAEIAALRSA 100
E++ + + I V+ G FG V G VA+K L G TE + R
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG----YTEKQ----RRD 92
Query: 101 FTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTY 160
F E ++ + DHPN+ + G V S +V E + G+L ++
Sbjct: 93 FLGEASIMGQFDHPNIIRLEG----------------VVTKSKPVMIVTEXMENGSLDSF 136
Query: 161 LIKNRRRKLAFKVV--VQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGV 218
L R+ F V+ V + +A G+ YL VHRD+ N+L++ N K++DFG+
Sbjct: 137 L---RKHDAQFTVIQLVGMLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGL 193
Query: 219 ARVEASNPNDMTGETG---TLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYPD 274
+RV +P G + + +PE + + DV+S+GI LWE+ + PY +
Sbjct: 194 SRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE 253
Query: 275 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTSKG 334
+S +V A V + R P CP++L +M CW + + RP+ +++VS+L+ + + G
Sbjct: 254 MSNQDVIKA-VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPG 312
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 143/296 (48%), Gaps = 39/296 (13%)
Query: 46 EIEPSKLVIKSVIARGTFGTV---HRGLYDGHD--VAVKLLDWGEEGHRTEAEIAALRSA 100
EI+ S + I+ VI G FG V H L + VA+K L G TE + R
Sbjct: 3 EIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSG----YTEKQ----RRD 54
Query: 101 FTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTY 160
F E ++ + DHPNV G S+ + I + E++ G+L ++
Sbjct: 55 FLSEASIMGQFDHPNVIHLEGVVTKSTPVMI----------------ITEFMENGSLDSF 98
Query: 161 LIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR 220
L +N + ++V L +A G+ YL VHR + N+L++ N K++DFG++R
Sbjct: 99 LRQNDGQFTVIQLVGMLR-GIAAGMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSR 157
Query: 221 VEASNPNDMTGETGTLG------YMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYP 273
+ +D T T LG + APE + + DV+S+GI +WE+ + PY
Sbjct: 158 FLEDDTSDPT-YTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYW 216
Query: 274 DLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAI 329
D++ +V +A + Q+ R P CPS+L +M CW + + RP+ ++V+ L+ +
Sbjct: 217 DMTNQDVINA-IEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKM 271
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 140/300 (46%), Gaps = 39/300 (13%)
Query: 46 EIEPSKLVIKSVIARGTFGTVHRGLYD-----GHDVAVKLLDWGEEGHRTEAEIAALRSA 100
E++ + + I V+ G FG V G VA+K L G TE + R
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG----YTEKQ----RRD 92
Query: 101 FTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTY 160
F E ++ + DHPN+ + G V S +V E + G+L ++
Sbjct: 93 FLGEASIMGQFDHPNIIRLEG----------------VVTKSKPVMIVTEXMENGSLDSF 136
Query: 161 LIKNRRRKLAFKVV--VQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGV 218
L R+ F V+ V + +A G+ YL VHRD+ N+L++ N K++DFG+
Sbjct: 137 L---RKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL 193
Query: 219 ARVEASNPNDMTGETG---TLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYPD 274
+RV +P G + + +PE + + DV+S+GI LWE+ + PY +
Sbjct: 194 SRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE 253
Query: 275 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTSKG 334
+S +V A V + R P CP++L +M CW + + RP+ +++VS+L+ + + G
Sbjct: 254 MSNQDVIKA-VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPG 312
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 130/293 (44%), Gaps = 35/293 (11%)
Query: 46 EIEPSKLVIKSVIARGTFGTVHRGLYDGHD-----VAVKLLDWGEEGHRTEAEIAALRSA 100
EI+ S + I+ VI G FG V G VA+K L G + R
Sbjct: 25 EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQ--------RRD 76
Query: 101 FTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTY 160
F E ++ + DHPN+ G + I + EY+ G+L +
Sbjct: 77 FLSEASIMGQFDHPNIIHLEGVVTKCKPVMI----------------ITEYMENGSLDAF 120
Query: 161 LIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR 220
L KN R ++V L + G+ YL VHRD+ N+L++ N K++DFG++R
Sbjct: 121 LRKNDGRFTVIQLVGMLR-GIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSR 179
Query: 221 VEASNPNDMTGETG---TLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYPDLS 276
V +P G + + APE + + DV+S+GI +WE+ + PY D+S
Sbjct: 180 VLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS 239
Query: 277 FSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAI 329
+V A + + R P CP +L +M CW RP+ ++V+ML+ +
Sbjct: 240 NQDVIKA-IEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKL 291
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 130/293 (44%), Gaps = 35/293 (11%)
Query: 46 EIEPSKLVIKSVIARGTFGTVHRGLYDGHD-----VAVKLLDWGEEGHRTEAEIAALRSA 100
EI+ S + I+ VI G FG V G VA+K L G + R
Sbjct: 10 EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQ--------RRD 61
Query: 101 FTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTY 160
F E ++ + DHPN+ G + I + EY+ G+L +
Sbjct: 62 FLSEASIMGQFDHPNIIHLEGVVTKCKPVMI----------------ITEYMENGSLDAF 105
Query: 161 LIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR 220
L KN R ++V L + G+ YL VHRD+ N+L++ N K++DFG++R
Sbjct: 106 LRKNDGRFTVIQLVGMLR-GIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSR 164
Query: 221 VEASNPNDMTGETG---TLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYPDLS 276
V +P G + + APE + + DV+S+GI +WE+ + PY D+S
Sbjct: 165 VLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS 224
Query: 277 FSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAI 329
+V A + + R P CP +L +M CW RP+ ++V+ML+ +
Sbjct: 225 NQDVIKA-IEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKL 276
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 130/293 (44%), Gaps = 35/293 (11%)
Query: 46 EIEPSKLVIKSVIARGTFGTVHRGLYDGHD-----VAVKLLDWGEEGHRTEAEIAALRSA 100
EI+ S + I+ VI G FG V G VA+K L G + R
Sbjct: 4 EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQ--------RRD 55
Query: 101 FTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTY 160
F E ++ + DHPN+ G + I + EY+ G+L +
Sbjct: 56 FLSEASIMGQFDHPNIIHLEGVVTKCKPVMI----------------ITEYMENGSLDAF 99
Query: 161 LIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR 220
L KN R ++V L + G+ YL VHRD+ N+L++ N K++DFG++R
Sbjct: 100 LRKNDGRFTVIQLVGMLR-GIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSR 158
Query: 221 VEASNPNDMTGETG---TLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYPDLS 276
V +P G + + APE + + DV+S+GI +WE+ + PY D+S
Sbjct: 159 VLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS 218
Query: 277 FSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAI 329
+V A + + R P CP +L +M CW RP+ ++V+ML+ +
Sbjct: 219 NQDVIKA-IEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKL 270
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 128/276 (46%), Gaps = 35/276 (12%)
Query: 61 GTFGTVHRGLYDGH----DVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPNV 116
G FG+V +G+Y DVA+K+L G E TE +E + H+LD+P +
Sbjct: 21 GNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEE--------MMREAQIMHQLDNPYI 72
Query: 117 TKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVVQ 176
+ IG + + +V+E GG L +L+ +R ++ V +
Sbjct: 73 VRLIGVCQAEALM-----------------LVMEMAGGGPLHKFLV-GKREEIPVSNVAE 114
Query: 177 LALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETG-- 234
L ++ G+ YL + VHRD+ N+LL KI+DFG+++ ++ + T +
Sbjct: 115 LLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGK 174
Query: 235 -TLGYMAPEVLNGNPYNRKCDVYSFGICLWE-IYCCDMPYPDLSFSEVTSAVVRQNLRPE 292
L + APE +N ++ + DV+S+G+ +WE + PY + EV A + Q R E
Sbjct: 175 WPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVM-AFIEQGKRME 233
Query: 293 IPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEA 328
P CP L +M CW + RP+ V + A
Sbjct: 234 CPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRA 269
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 139/295 (47%), Gaps = 33/295 (11%)
Query: 46 EIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRS--AFTQ 103
E+ K+ + + +G+FG V+ G + D+ +K +T E A+LR F
Sbjct: 12 EVSREKITLLRELGQGSFGMVYEG--NARDI-IKGEAETRVAVKTVNESASLRERIEFLN 68
Query: 104 EVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIK 163
E +V +V + +G GQ + VV+E + G LK+YL
Sbjct: 69 EASVMKGFTCHHVVRLLGVV----------SKGQPTL------VVMELMAHGDLKSYLRS 112
Query: 164 NR--------RRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIAD 215
R R + ++Q+A ++A G++YL+++K VHRD+ N ++ + TVKI D
Sbjct: 113 LRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGD 172
Query: 216 FGVARVEASNPNDMTGETGTLG--YMAPEVLNGNPYNRKCDVYSFGICLWEIYC-CDMPY 272
FG+ R G G L +MAPE L + D++SFG+ LWEI + PY
Sbjct: 173 FGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPY 232
Query: 273 PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLE 327
LS +V V+ + P CP + ++M+ CW NP RP E+V++L+
Sbjct: 233 QGLSNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 286
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 142/319 (44%), Gaps = 50/319 (15%)
Query: 42 RQDWEIEPSKLVIKSVIARGTFGTVHRGLYD------GHDVAVKLLDWGEEGHRTEAEIA 95
R + E L + +G FG+V YD G VAVK L E H
Sbjct: 8 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH------- 60
Query: 96 ALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGG 155
LR F +E+ + L H N+ K+ G + +++ +++EYLP G
Sbjct: 61 -LRD-FEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--------------LIMEYLPYG 104
Query: 156 ALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIAD 215
+L+ YL K++ R K++ Q + +G+ YL +++ +HRD+ T N+L++ VKI D
Sbjct: 105 SLRDYLQKHKERIDHIKLL-QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGD 163
Query: 216 FGVARVEASNPNDMT----GETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEI--YCCD 269
FG+ +V + GE+ Y APE L + ++ DV+SFG+ L+E+ Y
Sbjct: 164 FGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTYIEK 222
Query: 270 MPYPDLSFSEVTS-------------AVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
P F + +++ N R P CP + +M CW+ N ++R
Sbjct: 223 SKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQR 282
Query: 317 PEMDEVVSMLEAIDTSKGG 335
P ++ ++ I + G
Sbjct: 283 PSFRDLALRVDQIRDNMAG 301
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 142/319 (44%), Gaps = 50/319 (15%)
Query: 42 RQDWEIEPSKLVIKSVIARGTFGTVHRGLYD------GHDVAVKLLDWGEEGHRTEAEIA 95
R + E L + +G FG+V YD G VAVK L E H
Sbjct: 5 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH------- 57
Query: 96 ALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGG 155
LR F +E+ + L H N+ K+ G + +++ +++EYLP G
Sbjct: 58 -LRD-FEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--------------LIMEYLPYG 101
Query: 156 ALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIAD 215
+L+ YL K++ R K++ Q + +G+ YL +++ +HRD+ T N+L++ VKI D
Sbjct: 102 SLRDYLQKHKERIDHIKLL-QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGD 160
Query: 216 FGVARVEASNPNDMT----GETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEI--YCCD 269
FG+ +V + GE+ Y APE L + ++ DV+SFG+ L+E+ Y
Sbjct: 161 FGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTYIEK 219
Query: 270 MPYPDLSFSEVTS-------------AVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
P F + +++ N R P CP + +M CW+ N ++R
Sbjct: 220 SKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQR 279
Query: 317 PEMDEVVSMLEAIDTSKGG 335
P ++ ++ I + G
Sbjct: 280 PSFRDLALRVDQIRDNMAG 298
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 142/319 (44%), Gaps = 50/319 (15%)
Query: 42 RQDWEIEPSKLVIKSVIARGTFGTVHRGLYD------GHDVAVKLLDWGEEGHRTEAEIA 95
R + E L + +G FG+V YD G VAVK L E H
Sbjct: 7 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH------- 59
Query: 96 ALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGG 155
LR F +E+ + L H N+ K+ G + +++ +++EYLP G
Sbjct: 60 -LRD-FEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--------------LIMEYLPYG 103
Query: 156 ALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIAD 215
+L+ YL K++ R K++ Q + +G+ YL +++ +HRD+ T N+L++ VKI D
Sbjct: 104 SLRDYLQKHKERIDHIKLL-QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGD 162
Query: 216 FGVARVEASNPNDMT----GETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEI--YCCD 269
FG+ +V + GE+ Y APE L + ++ DV+SFG+ L+E+ Y
Sbjct: 163 FGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTYIEK 221
Query: 270 MPYPDLSFSEVTS-------------AVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
P F + +++ N R P CP + +M CW+ N ++R
Sbjct: 222 SKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQR 281
Query: 317 PEMDEVVSMLEAIDTSKGG 335
P ++ ++ I + G
Sbjct: 282 PSFRDLALRVDQIRDNMAG 300
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 145/323 (44%), Gaps = 51/323 (15%)
Query: 42 RQDWEIEPSKLVIKSVIARGTFGTVHRGLYD------GHDVAVKLLDWGEEGHRTEAEIA 95
R + E L + +G FG+V YD G VAVK L E H
Sbjct: 6 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH------- 58
Query: 96 ALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGG 155
LR F +E+ + L H N+ K+ G + +++ +++EYLP G
Sbjct: 59 -LRD-FEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--------------LIMEYLPYG 102
Query: 156 ALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIAD 215
+L+ YL K++ R K++ Q + +G+ YL +++ +HRD+ T N+L++ VKI D
Sbjct: 103 SLRDYLQKHKERIDHIKLL-QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGD 161
Query: 216 FGVARVEASNPNDMT----GETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEI--YCCD 269
FG+ +V + GE+ Y APE L + ++ DV+SFG+ L+E+ Y
Sbjct: 162 FGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTYIEK 220
Query: 270 MPYPDLSFSEVTS-------------AVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
P F + +++ N R P CP + +M CW+ N ++R
Sbjct: 221 SKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQR 280
Query: 317 PEMDEVVSMLEAIDTSKGGGMIP 339
P ++ ++ I + G++P
Sbjct: 281 PSFRDLALRVDQIRDNM-AGLVP 302
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 142/319 (44%), Gaps = 50/319 (15%)
Query: 42 RQDWEIEPSKLVIKSVIARGTFGTVHRGLYD------GHDVAVKLLDWGEEGHRTEAEIA 95
R + E L + +G FG+V YD G VAVK L E H
Sbjct: 9 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH------- 61
Query: 96 ALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGG 155
LR F +E+ + L H N+ K+ G + +++ +++EYLP G
Sbjct: 62 -LRD-FEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--------------LIMEYLPYG 105
Query: 156 ALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIAD 215
+L+ YL K++ R K++ Q + +G+ YL +++ +HRD+ T N+L++ VKI D
Sbjct: 106 SLRDYLQKHKERIDHIKLL-QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGD 164
Query: 216 FGVARVEASNPNDMT----GETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEI--YCCD 269
FG+ +V + GE+ Y APE L + ++ DV+SFG+ L+E+ Y
Sbjct: 165 FGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTYIEK 223
Query: 270 MPYPDLSFSEVTS-------------AVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
P F + +++ N R P CP + +M CW+ N ++R
Sbjct: 224 SKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQR 283
Query: 317 PEMDEVVSMLEAIDTSKGG 335
P ++ ++ I + G
Sbjct: 284 PSFRDLALRVDQIRDNMAG 302
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 141/319 (44%), Gaps = 50/319 (15%)
Query: 42 RQDWEIEPSKLVIKSVIARGTFGTVHRGLYD------GHDVAVKLLDWGEEGHRTEAEIA 95
R + E L + +G FG+V YD G VAVK L E H
Sbjct: 33 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH------- 85
Query: 96 ALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGG 155
LR F +E+ + L H N+ K+ G + +++ +++EYLP G
Sbjct: 86 -LRD-FEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--------------LIMEYLPYG 129
Query: 156 ALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIAD 215
+L+ YL K++ R K++ Q + +G+ YL +++ +HRD+ T N+L++ VKI D
Sbjct: 130 SLRDYLQKHKERIDHIKLL-QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGD 188
Query: 216 FGVARVEASNPNDMT----GETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEI--YCCD 269
FG+ +V + GE+ Y APE L + ++ DV+SFG+ L+E+ Y
Sbjct: 189 FGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTYIEK 247
Query: 270 MPYPDLSFSEVTS-------------AVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
P F + +++ N R P CP + +M CW+ N ++R
Sbjct: 248 SKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQR 307
Query: 317 PEMDEVVSMLEAIDTSKGG 335
P ++ ++ I G
Sbjct: 308 PSFRDLALRVDQIRDQMAG 326
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 141/315 (44%), Gaps = 50/315 (15%)
Query: 46 EIEPSKLVIKSVIARGTFGTVHRGLYD------GHDVAVKLLDWGEEGHRTEAEIAALRS 99
+ E L + +G FG+V YD G VAVK L E H LR
Sbjct: 24 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH--------LRD 75
Query: 100 AFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKT 159
F +E+ + L H N+ K+ G + +++ +++EYLP G+L+
Sbjct: 76 -FEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--------------LIMEYLPYGSLRD 120
Query: 160 YLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVA 219
YL K++ R K++ Q + +G+ YL +++ +HRD+ T N+L++ VKI DFG+
Sbjct: 121 YLQKHKERIDHIKLL-QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 179
Query: 220 RVEASNPNDMT----GETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEI--YCCDMPYP 273
+V + GE+ Y APE L + ++ DV+SFG+ L+E+ Y P
Sbjct: 180 KVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP 238
Query: 274 DLSFSEVTS-------------AVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMD 320
F + +++ N R P CP + +M CW+ N ++RP
Sbjct: 239 PAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFR 298
Query: 321 EVVSMLEAIDTSKGG 335
++ ++ I + G
Sbjct: 299 DLALRVDQIRDNMAG 313
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 142/319 (44%), Gaps = 50/319 (15%)
Query: 42 RQDWEIEPSKLVIKSVIARGTFGTVHRGLYD------GHDVAVKLLDWGEEGHRTEAEIA 95
R + E L + +G FG+V YD G VAVK L E H
Sbjct: 2 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH------- 54
Query: 96 ALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGG 155
LR F +E+ + L H N+ K+ G + +++ +++EYLP G
Sbjct: 55 -LRD-FEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--------------LIMEYLPYG 98
Query: 156 ALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIAD 215
+L+ YL K++ R K++ Q + +G+ YL +++ +HRD+ T N+L++ VKI D
Sbjct: 99 SLRDYLQKHKERIDHIKLL-QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGD 157
Query: 216 FGVARVEASNPNDMT----GETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEI--YCCD 269
FG+ +V + GE+ Y APE L + ++ DV+SFG+ L+E+ Y
Sbjct: 158 FGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTYIEK 216
Query: 270 MPYPDLSFSEVTS-------------AVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
P F + +++ N R P CP + +M CW+ N ++R
Sbjct: 217 SKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQR 276
Query: 317 PEMDEVVSMLEAIDTSKGG 335
P ++ ++ I + G
Sbjct: 277 PSFRDLALRVDQIRDNMAG 295
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 141/315 (44%), Gaps = 50/315 (15%)
Query: 46 EIEPSKLVIKSVIARGTFGTVHRGLYD------GHDVAVKLLDWGEEGHRTEAEIAALRS 99
+ E L + +G FG+V YD G VAVK L E H LR
Sbjct: 6 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH--------LRD 57
Query: 100 AFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKT 159
F +E+ + L H N+ K+ G + +++ +++EYLP G+L+
Sbjct: 58 -FEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--------------LIMEYLPYGSLRD 102
Query: 160 YLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVA 219
YL K++ R K++ Q + +G+ YL +++ +HRD+ T N+L++ VKI DFG+
Sbjct: 103 YLQKHKERIDHIKLL-QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 161
Query: 220 RVEASNPNDMT----GETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEI--YCCDMPYP 273
+V + GE+ Y APE L + ++ DV+SFG+ L+E+ Y P
Sbjct: 162 KVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP 220
Query: 274 DLSFSEVTS-------------AVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMD 320
F + +++ N R P CP + +M CW+ N ++RP
Sbjct: 221 PAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFR 280
Query: 321 EVVSMLEAIDTSKGG 335
++ ++ I + G
Sbjct: 281 DLALRVDQIRDNMAG 295
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 141/315 (44%), Gaps = 50/315 (15%)
Query: 46 EIEPSKLVIKSVIARGTFGTVHRGLYD------GHDVAVKLLDWGEEGHRTEAEIAALRS 99
+ E L + +G FG+V YD G VAVK L E H LR
Sbjct: 6 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH--------LRD 57
Query: 100 AFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKT 159
F +E+ + L H N+ K+ G + +++ +++EYLP G+L+
Sbjct: 58 -FEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--------------LIMEYLPYGSLRD 102
Query: 160 YLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVA 219
YL K++ R K++ Q + +G+ YL +++ +HRD+ T N+L++ VKI DFG+
Sbjct: 103 YLQKHKERIDHIKLL-QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 161
Query: 220 RVEASNPNDMT----GETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEI--YCCDMPYP 273
+V + GE+ Y APE L + ++ DV+SFG+ L+E+ Y P
Sbjct: 162 KVLPQDKEFFKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP 220
Query: 274 DLSFSEVTS-------------AVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMD 320
F + +++ N R P CP + +M CW+ N ++RP
Sbjct: 221 PAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFR 280
Query: 321 EVVSMLEAIDTSKGG 335
++ ++ I + G
Sbjct: 281 DLALRVDQIRDNMAG 295
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 140/315 (44%), Gaps = 50/315 (15%)
Query: 46 EIEPSKLVIKSVIARGTFGTVHRGLYD------GHDVAVKLLDWGEEGHRTEAEIAALRS 99
+ E L + +G FG+V YD G VAVK L E H LR
Sbjct: 4 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH--------LRD 55
Query: 100 AFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKT 159
F +E+ + L H N+ K+ G + +++ +++EYLP G+L+
Sbjct: 56 -FEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--------------LIMEYLPYGSLRD 100
Query: 160 YLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVA 219
YL K++ R K++ Q + +G+ YL +++ +HRD+ T N+L++ VKI DFG+
Sbjct: 101 YLQKHKERIDHIKLL-QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 159
Query: 220 RVEASNPNDMT----GETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEI--YCCDMPYP 273
+V + GE+ Y APE L + ++ DV+SFG+ L+E+ Y P
Sbjct: 160 KVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP 218
Query: 274 DLSFSEVTS-------------AVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMD 320
F + +++ N R P CP + +M CW+ N ++RP
Sbjct: 219 PAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFR 278
Query: 321 EVVSMLEAIDTSKGG 335
++ ++ I G
Sbjct: 279 DLALRVDQIRDQMAG 293
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 141/311 (45%), Gaps = 31/311 (9%)
Query: 31 IGKASNFLKKQRQDWEIEPSKLVIKSVIARGTFGTVHRGLYDGHD-----VAVKLLDWGE 85
+ + S L+ + +D I+ + L++ ++ G FG+V G D VAVK +
Sbjct: 15 VPRGSEELQNKLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDN 74
Query: 86 EGHRTEAEIAALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNIC 145
R E F E A HPNV + +G I+ + + P
Sbjct: 75 SSQREIEE-------FLSEAACMKDFSHPNVIRLLGVC-------IEMSSQGIPKP---- 116
Query: 146 CVVVEYLPGGALKTYLIKNRR----RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTE 201
V++ ++ G L TYL+ +R + + + +++ +D+A G+ YL ++ +HRD+
Sbjct: 117 MVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAAR 176
Query: 202 NMLLDKNRTVKIADFGVARVEASNPNDMTGETGTL--GYMAPEVLNGNPYNRKCDVYSFG 259
N +L + TV +ADFG+++ S G + ++A E L Y K DV++FG
Sbjct: 177 NCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFG 236
Query: 260 ICLWEIYCCDM-PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPE 318
+ +WEI M PYP + E+ ++ + R + P C L +M CW +P RP
Sbjct: 237 VTMWEIATRGMTPYPGVQNHEMYDYLLHGH-RLKQPEDCLDELYEIMYSCWRTDPLDRPT 295
Query: 319 MDEVVSMLEAI 329
+ LE +
Sbjct: 296 FSVLRLQLEKL 306
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 134/274 (48%), Gaps = 41/274 (14%)
Query: 58 IARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPN 115
I +G F V R + G +VAVK++D +T+ ++L+ F +EV + L+HPN
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIID------KTQLNSSSLQKLF-REVRIMKVLNHPN 74
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLI-----KNRRRKLA 170
+ K I+TE +V+EY GG + YL+ K + +
Sbjct: 75 IVKLFEV--------IETEK--------TLYLVMEYASGGEVFDYLVAHGRMKEKEARAK 118
Query: 171 FKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMT 230
F+ +V + Y H + IVHRD+K EN+LLD + +KIADFG + E + N +
Sbjct: 119 FRQIVS-------AVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN-EFTFGNKLD 170
Query: 231 GETGTLGYMAPEVLNGNPYNR-KCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNL 289
G+ Y APE+ G Y+ + DV+S G+ L+ + +P+ + E+ V+R
Sbjct: 171 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
Query: 290 RPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
R IP + N++K+ NP KR +++++
Sbjct: 231 R--IPFYMSTDCENLLKKFLILNPSKRGTLEQIM 262
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 133/274 (48%), Gaps = 41/274 (14%)
Query: 58 IARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPN 115
I +G F V R + G +VAVK++D +T+ ++L+ F +EV + L+HPN
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIID------KTQLNSSSLQKLF-REVRIMKVLNHPN 74
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLI-----KNRRRKLA 170
+ K I+TE +V+EY GG + YL+ K + +
Sbjct: 75 IVKLFEV--------IETEK--------TLYLVMEYASGGEVFDYLVAHGRMKEKEARAK 118
Query: 171 FKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMT 230
F+ +V + Y H + IVHRD+K EN+LLD + +KIADFG + E + N +
Sbjct: 119 FRQIVS-------AVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN-EFTFGNKLD 170
Query: 231 GETGTLGYMAPEVLNGNPYNR-KCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNL 289
G Y APE+ G Y+ + DV+S G+ L+ + +P+ + E+ V+R
Sbjct: 171 AFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
Query: 290 RPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
R IP + N++K+ NP KR +++++
Sbjct: 231 R--IPFYMSTDCENLLKKFLILNPSKRGTLEQIM 262
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 132/297 (44%), Gaps = 29/297 (9%)
Query: 43 QDWEIEPSKLVIKSVIARGTFGTVHRGLYDGH-------DVAVKLLDWGEEGHRTEAEIA 95
+ WE + L + G FG V G VAVK+L EA ++
Sbjct: 31 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 90
Query: 96 ALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCV--VVEYLP 153
L+ + H H N+ +GA T G V + + CC ++ +L
Sbjct: 91 ELK-------IMSHLGQHENIVNLLGAC---------THGGPVLVITEYCCYGDLLNFLR 134
Query: 154 GGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKI 213
A + L K R L + ++ + +A+G+++L S+ +HRDV N+LL KI
Sbjct: 135 RKA-EADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKI 193
Query: 214 ADFGVARVEASNPNDMTGETGTL--GYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDM- 270
DFG+AR ++ N + L +MAPE + Y + DV+S+GI LWEI+ +
Sbjct: 194 GDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLN 253
Query: 271 PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLE 327
PYP + + +V+ + P P ++ ++M+ CW P RP ++ S L+
Sbjct: 254 PYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 310
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 134/274 (48%), Gaps = 41/274 (14%)
Query: 58 IARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPN 115
I +G F V R + G +VAVK++D +T+ ++L+ F +EV + L+HPN
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIID------KTQLNSSSLQKLF-REVRIMKVLNHPN 74
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLI-----KNRRRKLA 170
+ K I+TE +V+EY GG + YL+ K + +
Sbjct: 75 IVKLFEV--------IETEK--------TLYLVMEYASGGEVFDYLVAHGRMKEKEARAK 118
Query: 171 FKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMT 230
F+ +V + Y H + IVHRD+K EN+LLD + +KIADFG + E + N +
Sbjct: 119 FRQIVS-------AVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN-EFTFGNKLD 170
Query: 231 GETGTLGYMAPEVLNGNPYNR-KCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNL 289
G+ Y APE+ G Y+ + DV+S G+ L+ + +P+ + E+ V+R
Sbjct: 171 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
Query: 290 RPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
R IP + N++K+ NP KR +++++
Sbjct: 231 R--IPFYMSTDCENLLKKFLILNPSKRGTLEQIM 262
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 128/276 (46%), Gaps = 35/276 (12%)
Query: 61 GTFGTVHRGLYDGH----DVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPNV 116
G FG+V +G+Y DVA+K+L G E TE +E + H+LD+P +
Sbjct: 347 GNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEE--------MMREAQIMHQLDNPYI 398
Query: 117 TKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVVQ 176
+ IG + + +V+E GG L +L+ +R ++ V +
Sbjct: 399 VRLIGVCQAEALM-----------------LVMEMAGGGPLHKFLV-GKREEIPVSNVAE 440
Query: 177 LALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETG-- 234
L ++ G+ YL + VHR++ N+LL KI+DFG+++ ++ + T +
Sbjct: 441 LLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGK 500
Query: 235 -TLGYMAPEVLNGNPYNRKCDVYSFGICLWE-IYCCDMPYPDLSFSEVTSAVVRQNLRPE 292
L + APE +N ++ + DV+S+G+ +WE + PY + EV A + Q R E
Sbjct: 501 WPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVM-AFIEQGKRME 559
Query: 293 IPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEA 328
P CP L +M CW + RP+ V + A
Sbjct: 560 CPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRA 595
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 132/297 (44%), Gaps = 29/297 (9%)
Query: 43 QDWEIEPSKLVIKSVIARGTFGTVHRGLYDGH-------DVAVKLLDWGEEGHRTEAEIA 95
+ WE + L + G FG V G VAVK+L EA ++
Sbjct: 39 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 98
Query: 96 ALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCV--VVEYLP 153
L+ + H H N+ +GA T G V + + CC ++ +L
Sbjct: 99 ELK-------IMSHLGQHENIVNLLGAC---------THGGPVLVITEYCCYGDLLNFLR 142
Query: 154 GGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKI 213
A + L K R L + ++ + +A+G+++L S+ +HRDV N+LL KI
Sbjct: 143 RKA-EADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKI 201
Query: 214 ADFGVARVEASNPNDMTGETGTL--GYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDM- 270
DFG+AR ++ N + L +MAPE + Y + DV+S+GI LWEI+ +
Sbjct: 202 GDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLN 261
Query: 271 PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLE 327
PYP + + +V+ + P P ++ ++M+ CW P RP ++ S L+
Sbjct: 262 PYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 318
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 134/274 (48%), Gaps = 41/274 (14%)
Query: 58 IARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPN 115
I +G F V R + G +VAVK++D +T+ ++L+ F +EV + L+HPN
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIID------KTQLNSSSLQKLF-REVRIMKVLNHPN 67
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLI-----KNRRRKLA 170
+ K I+TE +V+EY GG + YL+ K + +
Sbjct: 68 IVKLFEV--------IETEK--------TLYLVMEYASGGEVFDYLVAHGWMKEKEARAK 111
Query: 171 FKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMT 230
F+ +V + Y H + IVHRD+K EN+LLD + +KIADFG + E + N +
Sbjct: 112 FRQIVS-------AVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN-EFTFGNKLD 163
Query: 231 GETGTLGYMAPEVLNGNPYNR-KCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNL 289
G+ Y APE+ G Y+ + DV+S G+ L+ + +P+ + E+ V+R
Sbjct: 164 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 223
Query: 290 RPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
R IP + N++K+ NP KR +++++
Sbjct: 224 R--IPFYMSTDCENLLKKFLILNPSKRGTLEQIM 255
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 139/309 (44%), Gaps = 50/309 (16%)
Query: 46 EIEPSKLVIKSVIARGTFGTVHRGLYD------GHDVAVKLLDWGEEGHRTEAEIAALRS 99
+ E L + +G FG+V YD G VAVK L E H LR
Sbjct: 24 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH--------LRD 75
Query: 100 AFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKT 159
F +E+ + L H N+ K+ G + +++ +++EYLP G+L+
Sbjct: 76 -FEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--------------LIMEYLPYGSLRD 120
Query: 160 YLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVA 219
YL K++ R K++ Q + +G+ YL +++ +HRD+ T N+L++ VKI DFG+
Sbjct: 121 YLQKHKERIDHIKLL-QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 179
Query: 220 RVEASNPNDMT----GETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEI--YCCDMPYP 273
+V + GE+ Y APE L + ++ DV+SFG+ L+E+ Y P
Sbjct: 180 KVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP 238
Query: 274 DLSFSEVTS-------------AVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMD 320
F + +++ N R P CP + +M CW+ N ++RP
Sbjct: 239 PAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFR 298
Query: 321 EVVSMLEAI 329
++ ++ I
Sbjct: 299 DLALRVDQI 307
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 140/313 (44%), Gaps = 50/313 (15%)
Query: 42 RQDWEIEPSKLVIKSVIARGTFGTVHRGLYD------GHDVAVKLLDWGEEGHRTEAEIA 95
R + E L + +G FG+V YD G VAVK L E H
Sbjct: 1 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH------- 53
Query: 96 ALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGG 155
LR F +E+ + L H N+ K+ G + +++ +++EYLP G
Sbjct: 54 -LRD-FEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--------------LIMEYLPYG 97
Query: 156 ALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIAD 215
+L+ YL K++ R K++ Q + +G+ YL +++ +HRD+ T N+L++ VKI D
Sbjct: 98 SLRDYLQKHKERIDHIKLL-QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGD 156
Query: 216 FGVARVEASNPNDMT----GETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEI--YCCD 269
FG+ +V + GE+ Y APE L + ++ DV+SFG+ L+E+ Y
Sbjct: 157 FGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTYIEK 215
Query: 270 MPYPDLSFSEVTS-------------AVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
P F + +++ N R P CP + +M CW+ N ++R
Sbjct: 216 SKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQR 275
Query: 317 PEMDEVVSMLEAI 329
P ++ ++ I
Sbjct: 276 PSFRDLALRVDQI 288
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 142/319 (44%), Gaps = 50/319 (15%)
Query: 42 RQDWEIEPSKLVIKSVIARGTFGTVHRGLYD------GHDVAVKLLDWGEEGHRTEAEIA 95
R + E L + +G FG+V YD G VAVK L E H
Sbjct: 5 RDPTQFEERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH------- 57
Query: 96 ALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGG 155
LR F +E+ + L H N+ K+ G + +++ +++E+LP G
Sbjct: 58 -LRD-FEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--------------LIMEFLPYG 101
Query: 156 ALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIAD 215
+L+ YL K++ R K++ Q + +G+ YL +++ +HRD+ T N+L++ VKI D
Sbjct: 102 SLREYLQKHKERIDHIKLL-QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGD 160
Query: 216 FGVARVEASNPNDMT----GETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEI--YCCD 269
FG+ +V + GE+ Y APE L + ++ DV+SFG+ L+E+ Y
Sbjct: 161 FGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTYIEK 219
Query: 270 MPYPDLSFSEVTS-------------AVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
P F + +++ N R P CP + +M CW+ N ++R
Sbjct: 220 SKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQR 279
Query: 317 PEMDEVVSMLEAIDTSKGG 335
P ++ ++ I + G
Sbjct: 280 PSFRDLALRVDQIRDNMAG 298
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 134/274 (48%), Gaps = 41/274 (14%)
Query: 58 IARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPN 115
I +G F V R + G +VAV+++D +T+ ++L+ F +EV + L+HPN
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIID------KTQLNSSSLQKLF-REVRIMKVLNHPN 74
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLI-----KNRRRKLA 170
+ K I+TE +V+EY GG + YL+ K + +
Sbjct: 75 IVKLFEV--------IETEK--------TLYLVMEYASGGEVFDYLVAHGRMKEKEARAK 118
Query: 171 FKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMT 230
F+ +V + Y H + IVHRD+K EN+LLD + +KIADFG + E + N +
Sbjct: 119 FRQIVS-------AVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN-EFTFGNKLD 170
Query: 231 GETGTLGYMAPEVLNGNPYNR-KCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNL 289
G+ Y APE+ G Y+ + DV+S G+ L+ + +P+ + E+ V+R
Sbjct: 171 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
Query: 290 RPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
R IP + N++K+ NP KR +++++
Sbjct: 231 R--IPFYMSTDCENLLKKFLILNPSKRGTLEQIM 262
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 132/302 (43%), Gaps = 33/302 (10%)
Query: 43 QDWEIEPSKLVIKSVIARGTFGTVHRGLYDGH-------DVAVKLLDWGEEGHRTEAEIA 95
+ WE + L + G FG V G VAVK+L EA ++
Sbjct: 39 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 98
Query: 96 ALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCV--VVEYL- 152
L+ + H H N+ +GA T G V + + CC ++ +L
Sbjct: 99 ELK-------IMSHLGQHENIVNLLGAC---------THGGPVLVITEYCCYGDLLNFLR 142
Query: 153 ----PGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKN 208
PG N +L+ + ++ + +A+G+++L S+ +HRDV N+LL
Sbjct: 143 RKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNG 202
Query: 209 RTVKIADFGVARVEASNPNDMTGETGTL--GYMAPEVLNGNPYNRKCDVYSFGICLWEIY 266
KI DFG+AR ++ N + L +MAPE + Y + DV+S+GI LWEI+
Sbjct: 203 HVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF 262
Query: 267 CCDM-PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSM 325
+ PYP + + +V+ + P P ++ ++M+ CW P RP ++ S
Sbjct: 263 SLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSF 322
Query: 326 LE 327
L+
Sbjct: 323 LQ 324
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 134/274 (48%), Gaps = 41/274 (14%)
Query: 58 IARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPN 115
I +G F V R + G +VAV+++D +T+ ++L+ F +EV + L+HPN
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIID------KTQLNSSSLQKLF-REVRIMKVLNHPN 74
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLI-----KNRRRKLA 170
+ K I+TE +V+EY GG + YL+ K + +
Sbjct: 75 IVKLFEV--------IETEK--------TLYLVMEYASGGEVFDYLVAHGRMKEKEARAK 118
Query: 171 FKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMT 230
F+ +V + Y H + IVHRD+K EN+LLD + +KIADFG + E + N +
Sbjct: 119 FRQIVS-------AVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN-EFTFGNKLD 170
Query: 231 GETGTLGYMAPEVLNGNPYNR-KCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNL 289
G+ Y APE+ G Y+ + DV+S G+ L+ + +P+ + E+ V+R
Sbjct: 171 EFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
Query: 290 RPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
R IP + N++K+ NP KR +++++
Sbjct: 231 R--IPFYMSTDCENLLKKFLILNPSKRGTLEQIM 262
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 126/288 (43%), Gaps = 43/288 (14%)
Query: 58 IARGTFGTVHRGLYDGH-------DVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHK 110
+ G FG V+ G G VAVK L E + + E+ F E + K
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL---PEVYSEQDELD-----FLMEALIISK 104
Query: 111 LDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRR--- 167
+H N+ + IG ++ S +P I ++E + GG LK++L + R R
Sbjct: 105 FNHQNIVRCIGVSLQS-------------LPRFI---LLELMAGGDLKSFLRETRPRPSQ 148
Query: 168 --KLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLD---KNRTVKIADFGVAR-- 220
LA ++ +A D+A G YL +HRD+ N LL R KI DFG+AR
Sbjct: 149 PSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 208
Query: 221 VEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCD-MPYPDLSFSE 279
AS + +M PE + K D +SFG+ LWEI+ MPYP S E
Sbjct: 209 YRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 268
Query: 280 VTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLE 327
V V R + P+ CP + +M +CW P+ RP ++ +E
Sbjct: 269 VLEFVTSGG-RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 142/317 (44%), Gaps = 57/317 (17%)
Query: 45 WEIEPSKLVIKSVIARGTFGTV-------HRGLYDGHDVAVKLLDWGEEGHRTEAEIAAL 97
WE LV+ + G FG V +G VAVK+L + A + L
Sbjct: 18 WEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKML-------KENASPSEL 70
Query: 98 RSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGAL 157
R + E V +++HP+V K GA +++G + ++VEY G+L
Sbjct: 71 RDLLS-EFNVLKQVNHPHVIKLYGAC---------SQDGPL-------LLIVEYAKYGSL 113
Query: 158 KTYLIKNRR----------------------RKLAFKVVVQLALDLARGLSYLHSQKIVH 195
+ +L ++R+ R L ++ A +++G+ YL K+VH
Sbjct: 114 RGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVH 173
Query: 196 RDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETGTL--GYMAPEVLNGNPYNRKC 253
RD+ N+L+ + R +KI+DFG++R + + G + +MA E L + Y +
Sbjct: 174 RDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQS 233
Query: 254 DVYSFGICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDAN 312
DV+SFG+ LWEI PYP + E +++ R E P C + +M +CW
Sbjct: 234 DVWSFGVLLWEIVTLGGNPYPGIP-PERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQE 292
Query: 313 PDKRPEMDEVVSMLEAI 329
PDKRP ++ LE +
Sbjct: 293 PDKRPVFADISKDLEKM 309
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 133/274 (48%), Gaps = 41/274 (14%)
Query: 58 IARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPN 115
I +G F V R + G +VA+K++D +T+ +L+ F +EV + L+HPN
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIID------KTQLNPTSLQKLF-REVRIMKILNHPN 72
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLI-----KNRRRKLA 170
+ K I+TE +++EY GG + YL+ K + +
Sbjct: 73 IVKLFEV--------IETEK--------TLYLIMEYASGGEVFDYLVAHGRMKEKEARSK 116
Query: 171 FKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMT 230
F+ +V + Y H ++IVHRD+K EN+LLD + +KIADFG + E + +
Sbjct: 117 FRQIVS-------AVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSN-EFTVGGKLD 168
Query: 231 GETGTLGYMAPEVLNGNPYNR-KCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNL 289
G+ Y APE+ G Y+ + DV+S G+ L+ + +P+ + E+ V+R
Sbjct: 169 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 228
Query: 290 RPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
R IP + N++KR NP KR +++++
Sbjct: 229 R--IPFYMSTDCENLLKRFLVLNPIKRGTLEQIM 260
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 131/274 (47%), Gaps = 41/274 (14%)
Query: 57 VIARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHP 114
I +G F V R + G +VAVK++D +T+ ++L+ F +EV + L+HP
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVKIID------KTQLNSSSLQKLF-REVRIXKVLNHP 73
Query: 115 NVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLI-----KNRRRKL 169
N+ K I+TE +V EY GG + YL+ K + +
Sbjct: 74 NIVKLFEV--------IETEK--------TLYLVXEYASGGEVFDYLVAHGRXKEKEARA 117
Query: 170 AFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDM 229
F+ +V + Y H + IVHRD+K EN+LLD + +KIADFG + E + N +
Sbjct: 118 KFRQIVS-------AVQYCHQKFIVHRDLKAENLLLDADXNIKIADFGFSN-EFTFGNKL 169
Query: 230 TGETGTLGYMAPEVLNGNPYNR-KCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQN 288
G Y APE+ G Y+ + DV+S G+ L+ + +P+ + E+ V+R
Sbjct: 170 DAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK 229
Query: 289 LRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 322
R IP + N++K+ NP KR ++++
Sbjct: 230 YR--IPFYXSTDCENLLKKFLILNPSKRGTLEQI 261
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 142/319 (44%), Gaps = 50/319 (15%)
Query: 42 RQDWEIEPSKLVIKSVIARGTFGTVHRGLYD------GHDVAVKLLDWGEEGHRTEAEIA 95
R + E L + +G FG+V YD G VAVK L E H
Sbjct: 3 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH------- 55
Query: 96 ALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGG 155
LR F +E+ + L H N+ K+ G + +++ +++EYLP G
Sbjct: 56 -LRD-FEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--------------LIMEYLPYG 99
Query: 156 ALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIAD 215
+L+ YL K++ R K++ Q + +G+ YL +++ +HR++ T N+L++ VKI D
Sbjct: 100 SLRDYLQKHKERIDHIKLL-QYTSQICKGMEYLGTKRYIHRNLATRNILVENENRVKIGD 158
Query: 216 FGVARVEASNPNDMT----GETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEI--YCCD 269
FG+ +V + GE+ Y APE L + ++ DV+SFG+ L+E+ Y
Sbjct: 159 FGLTKVLPQDKEYYKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTYIEK 217
Query: 270 MPYPDLSFSEVTS-------------AVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
P F + +++ N R P CP + +M CW+ N ++R
Sbjct: 218 SKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQR 277
Query: 317 PEMDEVVSMLEAIDTSKGG 335
P ++ ++ I + G
Sbjct: 278 PSFRDLALRVDQIRDNMAG 296
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 142/317 (44%), Gaps = 57/317 (17%)
Query: 45 WEIEPSKLVIKSVIARGTFGTV-------HRGLYDGHDVAVKLLDWGEEGHRTEAEIAAL 97
WE LV+ + G FG V +G VAVK+L + A + L
Sbjct: 18 WEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKML-------KENASPSEL 70
Query: 98 RSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGAL 157
R + E V +++HP+V K GA +++G + ++VEY G+L
Sbjct: 71 RDLLS-EFNVLKQVNHPHVIKLYGAC---------SQDGPL-------LLIVEYAKYGSL 113
Query: 158 KTYLIKNRR----------------------RKLAFKVVVQLALDLARGLSYLHSQKIVH 195
+ +L ++R+ R L ++ A +++G+ YL K+VH
Sbjct: 114 RGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVH 173
Query: 196 RDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETGTL--GYMAPEVLNGNPYNRKC 253
RD+ N+L+ + R +KI+DFG++R + + G + +MA E L + Y +
Sbjct: 174 RDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQS 233
Query: 254 DVYSFGICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDAN 312
DV+SFG+ LWEI PYP + E +++ R E P C + +M +CW
Sbjct: 234 DVWSFGVLLWEIVTLGGNPYPGIP-PERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQE 292
Query: 313 PDKRPEMDEVVSMLEAI 329
PDKRP ++ LE +
Sbjct: 293 PDKRPVFADISKDLEKM 309
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 132/274 (48%), Gaps = 41/274 (14%)
Query: 58 IARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPN 115
I +G F V R + G +VA+K++D +T+ +L+ F +EV + L+HPN
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIID------KTQLNPTSLQKLF-REVRIMKILNHPN 75
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLI-----KNRRRKLA 170
+ K I+TE +++EY GG + YL+ K + +
Sbjct: 76 IVKLFEV--------IETEK--------TLYLIMEYASGGEVFDYLVAHGRMKEKEARSK 119
Query: 171 FKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMT 230
F+ +V + Y H ++IVHRD+K EN+LLD + +KIADFG + E + +
Sbjct: 120 FRQIVS-------AVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSN-EFTVGGKLD 171
Query: 231 GETGTLGYMAPEVLNGNPYNR-KCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNL 289
G Y APE+ G Y+ + DV+S G+ L+ + +P+ + E+ V+R
Sbjct: 172 AFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 231
Query: 290 RPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
R IP + N++KR NP KR +++++
Sbjct: 232 R--IPFYMSTDCENLLKRFLVLNPIKRGTLEQIM 263
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 110 bits (276), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 126/288 (43%), Gaps = 43/288 (14%)
Query: 58 IARGTFGTVHRGLYDGH-------DVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHK 110
+ G FG V+ G G VAVK L E + E+ F E + K
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL---PEVCSEQDELD-----FLMEALIISK 104
Query: 111 LDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRR--- 167
L+H N+ + IG ++ S +P I ++E + GG LK++L + R R
Sbjct: 105 LNHQNIVRCIGVSLQS-------------LPRFI---LLELMAGGDLKSFLRETRPRPSQ 148
Query: 168 --KLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLD---KNRTVKIADFGVAR-- 220
LA ++ +A D+A G YL +HRD+ N LL R KI DFG+AR
Sbjct: 149 PSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 208
Query: 221 VEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCD-MPYPDLSFSE 279
AS + +M PE + K D +SFG+ LWEI+ MPYP S E
Sbjct: 209 YRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 268
Query: 280 VTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLE 327
V V R + P+ CP + +M +CW P+ RP ++ +E
Sbjct: 269 VLEFVTSGG-RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 110 bits (276), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 98/325 (30%), Positives = 145/325 (44%), Gaps = 65/325 (20%)
Query: 52 LVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQ-EVAVWHK 110
+V++ I +G FG V RG + G +VAVK+ EE RS F + E+
Sbjct: 5 IVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREE-----------RSWFREAEIYQTVM 53
Query: 111 LDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLA 170
L H N+ FI A +NG +V +Y G+L YL R +
Sbjct: 54 LRHENILGFIAAD--------NKDNGTWTQ----LWLVSDYHEHGSLFDYL---NRYTVT 98
Query: 171 FKVVVQLALDLARGLSYLHSQ--------KIVHRDVKTENMLLDKNRTVKIADFGVARVE 222
+ +++LAL A GL++LH + I HRD+K++N+L+ KN T IAD G+A
Sbjct: 99 VEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 158
Query: 223 ASNPNDM----TGETGTLGYMAPEVLNGN------PYNRKCDVYSFGICLWEIY--CC-- 268
S + + GT YMAPEVL+ + ++ D+Y+ G+ WEI C
Sbjct: 159 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIG 218
Query: 269 ------DMPYPDL-----SFSEVTSAVVRQNLRPEIP---RCCPS--SLANVMKRCWDAN 312
+PY DL S E+ V Q LRP IP + C + +A +M+ CW AN
Sbjct: 219 GIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYAN 278
Query: 313 PDKRPEMDEVVSMLEAIDTSKGGGM 337
R + L + +G M
Sbjct: 279 GAARLTALRIKKTLSQLSQQEGIKM 303
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 110 bits (276), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 98/325 (30%), Positives = 145/325 (44%), Gaps = 65/325 (20%)
Query: 52 LVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQ-EVAVWHK 110
+V++ I +G FG V RG + G +VAVK+ EE RS F + E+
Sbjct: 8 IVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREE-----------RSWFREAEIYQTVM 56
Query: 111 LDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLA 170
L H N+ FI A +NG +V +Y G+L YL R +
Sbjct: 57 LRHENILGFIAAD--------NKDNGTWTQ----LWLVSDYHEHGSLFDYL---NRYTVT 101
Query: 171 FKVVVQLALDLARGLSYLHSQ--------KIVHRDVKTENMLLDKNRTVKIADFGVARVE 222
+ +++LAL A GL++LH + I HRD+K++N+L+ KN T IAD G+A
Sbjct: 102 VEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 161
Query: 223 ASNPNDM----TGETGTLGYMAPEVLNGN------PYNRKCDVYSFGICLWEIY--CC-- 268
S + + GT YMAPEVL+ + ++ D+Y+ G+ WEI C
Sbjct: 162 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIG 221
Query: 269 ------DMPYPDL-----SFSEVTSAVVRQNLRPEIP---RCCPS--SLANVMKRCWDAN 312
+PY DL S E+ V Q LRP IP + C + +A +M+ CW AN
Sbjct: 222 GIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYAN 281
Query: 313 PDKRPEMDEVVSMLEAIDTSKGGGM 337
R + L + +G M
Sbjct: 282 GAARLTALRIKKTLSQLSQQEGIKM 306
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 110 bits (276), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 98/325 (30%), Positives = 145/325 (44%), Gaps = 65/325 (20%)
Query: 52 LVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQ-EVAVWHK 110
+V++ I +G FG V RG + G +VAVK+ EE RS F + E+
Sbjct: 11 IVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREE-----------RSWFREAEIYQTVM 59
Query: 111 LDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLA 170
L H N+ FI A +NG +V +Y G+L YL R +
Sbjct: 60 LRHENILGFIAAD--------NKDNGTWTQ----LWLVSDYHEHGSLFDYL---NRYTVT 104
Query: 171 FKVVVQLALDLARGLSYLHSQ--------KIVHRDVKTENMLLDKNRTVKIADFGVARVE 222
+ +++LAL A GL++LH + I HRD+K++N+L+ KN T IAD G+A
Sbjct: 105 VEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 164
Query: 223 ASNPNDM----TGETGTLGYMAPEVLNGN------PYNRKCDVYSFGICLWEIY--CC-- 268
S + + GT YMAPEVL+ + ++ D+Y+ G+ WEI C
Sbjct: 165 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIG 224
Query: 269 ------DMPYPDL-----SFSEVTSAVVRQNLRPEIP---RCCPS--SLANVMKRCWDAN 312
+PY DL S E+ V Q LRP IP + C + +A +M+ CW AN
Sbjct: 225 GIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYAN 284
Query: 313 PDKRPEMDEVVSMLEAIDTSKGGGM 337
R + L + +G M
Sbjct: 285 GAARLTALRIKKTLSQLSQQEGIKM 309
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 110 bits (276), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 123/264 (46%), Gaps = 27/264 (10%)
Query: 58 IARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPNVT 117
+ G FGTV +G Y + + + + EA AL+ E V +LD+P +
Sbjct: 19 LGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 75
Query: 118 KFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVVQL 177
+ IG S + +V+E G L YL +NR K K +++L
Sbjct: 76 RMIGICEAESWM-----------------LVMEMAELGPLNKYLQQNRHVK--DKNIIEL 116
Query: 178 ALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGET---G 234
++ G+ YL VHRD+ N+LL KI+DFG+++ ++ N +T
Sbjct: 117 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKW 176
Query: 235 TLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDM-PYPDLSFSEVTSAVVRQNLRPEI 293
+ + APE +N ++ K DV+SFG+ +WE + PY + SEVT A++ + R
Sbjct: 177 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT-AMLEKGERMGC 235
Query: 294 PRCCPSSLANVMKRCWDANPDKRP 317
P CP + ++M CW + + RP
Sbjct: 236 PAGCPREMYDLMNLCWTYDVENRP 259
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 110 bits (276), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 131/294 (44%), Gaps = 48/294 (16%)
Query: 58 IARGTFGTVHRGLYD------GHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKL 111
+ G FG V YD G VAVK L E LRS + +E+ + L
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALK--------EGCGPQLRSGWQREIEILRTL 67
Query: 112 DHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAF 171
H ++ K+ G E +Q +V+EY+P G+L+ YL R +
Sbjct: 68 YHEHIVKYKGCCEDQGEKSVQ--------------LVMEYVPLGSLRDYL---PRHCVGL 110
Query: 172 KVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR-VEASNPNDMT 230
++ A + G++YLH+Q +HR + N+LLD +R VKI DFG+A+ V +
Sbjct: 111 AQLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRV 170
Query: 231 GETGT--LGYMAPEVLNGNPYNRKCDVYSFGICLWEI--YCCDMPYPDLSFSEVT----- 281
E G + + APE L + DV+SFG+ L+E+ YC P F+E+
Sbjct: 171 REDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQG 230
Query: 282 -------SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEA 328
+ ++ + R P CP + ++MK CW+ RP +V +L+
Sbjct: 231 QMTVLRLTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPILQT 284
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 110 bits (276), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 131/294 (44%), Gaps = 48/294 (16%)
Query: 58 IARGTFGTVHRGLYD------GHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKL 111
+ G FG V YD G VAVK L E LRS + +E+ + L
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALK--------EGCGPQLRSGWQREIEILRTL 68
Query: 112 DHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAF 171
H ++ K+ G E +Q +V+EY+P G+L+ YL R +
Sbjct: 69 YHEHIVKYKGCCEDQGEKSVQ--------------LVMEYVPLGSLRDYL---PRHCVGL 111
Query: 172 KVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR-VEASNPNDMT 230
++ A + G++YLH+Q +HR + N+LLD +R VKI DFG+A+ V +
Sbjct: 112 AQLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRV 171
Query: 231 GETGT--LGYMAPEVLNGNPYNRKCDVYSFGICLWEI--YCCDMPYPDLSFSEVT----- 281
E G + + APE L + DV+SFG+ L+E+ YC P F+E+
Sbjct: 172 REDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQG 231
Query: 282 -------SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEA 328
+ ++ + R P CP + ++MK CW+ RP +V +L+
Sbjct: 232 QMTVLRLTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPILQT 285
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 110 bits (276), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 126/288 (43%), Gaps = 43/288 (14%)
Query: 58 IARGTFGTVHRGLYDGH-------DVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHK 110
+ G FG V+ G G VAVK L E + E+ F E + K
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL---PEVCSEQDELD-----FLMEALIISK 90
Query: 111 LDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRR--- 167
L+H N+ + IG ++ S +P I ++E + GG LK++L + R R
Sbjct: 91 LNHQNIVRCIGVSLQS-------------LPRFI---LLELMAGGDLKSFLRETRPRPSQ 134
Query: 168 --KLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLD---KNRTVKIADFGVAR-- 220
LA ++ +A D+A G YL +HRD+ N LL R KI DFG+AR
Sbjct: 135 PSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 194
Query: 221 VEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCD-MPYPDLSFSE 279
AS + +M PE + K D +SFG+ LWEI+ MPYP S E
Sbjct: 195 YRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 254
Query: 280 VTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLE 327
V V R + P+ CP + +M +CW P+ RP ++ +E
Sbjct: 255 VLEFVTSGG-RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 146/312 (46%), Gaps = 51/312 (16%)
Query: 46 EIEPS---KLVIKSV--IARGTFGTVHRGLYD------GHDVAVKLLDWGEEGHRTEAEI 94
E++P+ K +K + + G FG V YD G VAVK L G+ I
Sbjct: 12 EVDPTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNH----I 67
Query: 95 AALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPG 154
A L+ +E+ + L H N+ K+ G I TE+G N +++E+LP
Sbjct: 68 ADLK----KEIEILRNLYHENIVKYKG---------ICTEDG-----GNGIKLIMEFLPS 109
Query: 155 GALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIA 214
G+LK YL KN+ K+ K ++ A+ + +G+ YL S++ VHRD+ N+L++ VKI
Sbjct: 110 GSLKEYLPKNKN-KINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIG 168
Query: 215 DFGVARVEASNPNDMT---GETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEI--YCCD 269
DFG+ + ++ T + + APE L + + DV+SFG+ L E+ YC
Sbjct: 169 DFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDS 228
Query: 270 MPYPDLSFSE----------VTSAV--VRQNLRPEIPRCCPSSLANVMKRCWDANPDKRP 317
P F + VT V +++ R P CP + +M++CW+ P R
Sbjct: 229 DSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRT 288
Query: 318 EMDEVVSMLEAI 329
++ EA+
Sbjct: 289 SFQNLIEGFEAL 300
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 136/303 (44%), Gaps = 52/303 (17%)
Query: 58 IARGTFGTVHRGLYD------GHDVAVKLL--DWGEEGHRTEAEIAALRSAFTQEVAVWH 109
+ G FG V YD G VAVK L D G + RS + QE+ +
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQH----------RSGWKQEIDILR 88
Query: 110 KLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKL 169
L H ++ K+ G + +Q +V+EY+P G+L+ YL R +
Sbjct: 89 TLYHEHIIKYKGCCEDAGAASLQ--------------LVMEYVPLGSLRDYL---PRHSI 131
Query: 170 AFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR-VEASNPND 228
++ A + G++YLH+Q +HRD+ N+LLD +R VKI DFG+A+ V +
Sbjct: 132 GLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXY 191
Query: 229 MTGETGT--LGYMAPEVLNGNPYNRKCDVYSFGICLWEI--YCCDMPYPDLSFSEVT--- 281
E G + + APE L + DV+SFG+ L+E+ +C P F E+
Sbjct: 192 RVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIA 251
Query: 282 ---------SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTS 332
+ ++ + R P CP+ + ++MK CW+ RP + ++ +L+ +
Sbjct: 252 QGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEK 311
Query: 333 KGG 335
G
Sbjct: 312 YQG 314
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 135/308 (43%), Gaps = 50/308 (16%)
Query: 46 EIEPSKLVIKSVIARGTFGTVHRG-------LYDGHDVAVKLLDWGEEGHRTEAEIAALR 98
I+ +V+K + G FG V D VAVK L + +AA R
Sbjct: 11 HIKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALK--------DPTLAA-R 61
Query: 99 SAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALK 158
F +E + L H ++ KF G L +V EY+ G L
Sbjct: 62 KDFQREAELLTNLQHEHIVKFYGVCGDGDPL----------------IMVFEYMKHGDLN 105
Query: 159 TYLI--------------KNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENML 204
+L + + +L ++ +A +A G+ YL SQ VHRD+ T N L
Sbjct: 106 KFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCL 165
Query: 205 LDKNRTVKIADFGVAR-VEASNPNDMTGETGT-LGYMAPEVLNGNPYNRKCDVYSFGICL 262
+ N VKI DFG++R V +++ + G T + +M PE + + + DV+SFG+ L
Sbjct: 166 VGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVIL 225
Query: 263 WEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDE 321
WEI+ P+ LS +EV + Q E PR CP + +VM CW P +R + E
Sbjct: 226 WEIFTYGKQPWFQLSNTEVIECIT-QGRVLERPRVCPKEVYDVMLGCWQREPQQRLNIKE 284
Query: 322 VVSMLEAI 329
+ +L A+
Sbjct: 285 IYKILHAL 292
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 123/264 (46%), Gaps = 27/264 (10%)
Query: 58 IARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPNVT 117
+ G FGTV +G Y + + + + EA AL+ E V +LD+P +
Sbjct: 377 LGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 433
Query: 118 KFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVVQL 177
+ IG S + +V+E G L YL +NR K K +++L
Sbjct: 434 RMIGICEAESWM-----------------LVMEMAELGPLNKYLQQNRHVKD--KNIIEL 474
Query: 178 ALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETG--- 234
++ G+ YL VHRD+ N+LL KI+DFG+++ ++ N +T
Sbjct: 475 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 534
Query: 235 TLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDM-PYPDLSFSEVTSAVVRQNLRPEI 293
+ + APE +N ++ K DV+SFG+ +WE + PY + SEVT A++ + R
Sbjct: 535 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT-AMLEKGERMGC 593
Query: 294 PRCCPSSLANVMKRCWDANPDKRP 317
P CP + ++M CW + + RP
Sbjct: 594 PAGCPREMYDLMNLCWTYDVENRP 617
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 123/264 (46%), Gaps = 27/264 (10%)
Query: 58 IARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPNVT 117
+ G FGTV +G Y + + + + EA AL+ E V +LD+P +
Sbjct: 25 LGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 81
Query: 118 KFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVVQL 177
+ IG S + +V+E G L YL +NR K K +++L
Sbjct: 82 RMIGICEAESWM-----------------LVMEMAELGPLNKYLQQNRHVK--DKNIIEL 122
Query: 178 ALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGET---G 234
++ G+ YL VHRD+ N+LL KI+DFG+++ ++ N +T
Sbjct: 123 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 182
Query: 235 TLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEI 293
+ + APE +N ++ K DV+SFG+ +WE + PY + SEVT A++ + R
Sbjct: 183 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT-AMLEKGERMGC 241
Query: 294 PRCCPSSLANVMKRCWDANPDKRP 317
P CP + ++M CW + + RP
Sbjct: 242 PAGCPREMYDLMNLCWTYDVENRP 265
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/325 (30%), Positives = 145/325 (44%), Gaps = 65/325 (20%)
Query: 52 LVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQ-EVAVWHK 110
+V++ I +G FG V RG + G +VAVK+ EE RS F + E+
Sbjct: 44 IVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREE-----------RSWFREAEIYQTVM 92
Query: 111 LDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLA 170
L H N+ FI A +NG +V +Y G+L YL R +
Sbjct: 93 LRHENILGFIAAD--------NKDNGTWTQ----LWLVSDYHEHGSLFDYL---NRYTVT 137
Query: 171 FKVVVQLALDLARGLSYLHSQ--------KIVHRDVKTENMLLDKNRTVKIADFGVARVE 222
+ +++LAL A GL++LH + I HRD+K++N+L+ KN T IAD G+A
Sbjct: 138 VEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 197
Query: 223 ASNPNDM----TGETGTLGYMAPEVLNGN------PYNRKCDVYSFGICLWEIY--CC-- 268
S + + GT YMAPEVL+ + ++ D+Y+ G+ WEI C
Sbjct: 198 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIG 257
Query: 269 ------DMPYPDL-----SFSEVTSAVVRQNLRPEIP---RCCPS--SLANVMKRCWDAN 312
+PY DL S E+ V Q LRP IP + C + +A +M+ CW AN
Sbjct: 258 GIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYAN 317
Query: 313 PDKRPEMDEVVSMLEAIDTSKGGGM 337
R + L + +G M
Sbjct: 318 GAARLTALRIKKTLSQLSQQEGIKM 342
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/322 (30%), Positives = 144/322 (44%), Gaps = 65/322 (20%)
Query: 52 LVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQ-EVAVWHK 110
+V++ I +G FG V RG + G +VAVK+ EE RS F + E+
Sbjct: 6 IVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREE-----------RSWFREAEIYQTVM 54
Query: 111 LDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLA 170
L H N+ FI A +NG +V +Y G+L YL R +
Sbjct: 55 LRHENILGFIAAD--------NKDNGTWTQ----LWLVSDYHEHGSLFDYL---NRYTVT 99
Query: 171 FKVVVQLALDLARGLSYLHSQ--------KIVHRDVKTENMLLDKNRTVKIADFGVARVE 222
+ +++LAL A GL++LH + I HRD+K++N+L+ KN T IAD G+A
Sbjct: 100 VEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 159
Query: 223 ASNPNDM----TGETGTLGYMAPEVLNGN------PYNRKCDVYSFGICLWEIY--CC-- 268
S + + GT YMAPEVL+ + ++ D+Y+ G+ WEI C
Sbjct: 160 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIG 219
Query: 269 ------DMPYPDL-----SFSEVTSAVVRQNLRPEIP---RCCPS--SLANVMKRCWDAN 312
+PY DL S E+ V Q LRP IP + C + +A +M+ CW AN
Sbjct: 220 GIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYAN 279
Query: 313 PDKRPEMDEVVSMLEAIDTSKG 334
R + L + +G
Sbjct: 280 GAARLTALRIKKTLSQLSQQEG 301
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 123/264 (46%), Gaps = 27/264 (10%)
Query: 58 IARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPNVT 117
+ G FGTV +G Y + + + + EA AL+ E V +LD+P +
Sbjct: 13 LGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 69
Query: 118 KFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVVQL 177
+ IG S + +V+E G L YL +NR K K +++L
Sbjct: 70 RMIGICEAESWM-----------------LVMEMAELGPLNKYLQQNRHVK--DKNIIEL 110
Query: 178 ALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGET---G 234
++ G+ YL VHRD+ N+LL KI+DFG+++ ++ N +T
Sbjct: 111 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 170
Query: 235 TLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDM-PYPDLSFSEVTSAVVRQNLRPEI 293
+ + APE +N ++ K DV+SFG+ +WE + PY + SEVT A++ + R
Sbjct: 171 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT-AMLEKGERMGC 229
Query: 294 PRCCPSSLANVMKRCWDANPDKRP 317
P CP + ++M CW + + RP
Sbjct: 230 PAGCPREMYDLMNLCWTYDVENRP 253
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 123/264 (46%), Gaps = 27/264 (10%)
Query: 58 IARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPNVT 117
+ G FGTV +G Y + + + + EA AL+ E V +LD+P +
Sbjct: 378 LGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 434
Query: 118 KFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVVQL 177
+ IG S + +V+E G L YL +NR K K +++L
Sbjct: 435 RMIGICEAESWM-----------------LVMEMAELGPLNKYLQQNRHVK--DKNIIEL 475
Query: 178 ALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETG--- 234
++ G+ YL VHRD+ N+LL KI+DFG+++ ++ N +T
Sbjct: 476 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 535
Query: 235 TLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDM-PYPDLSFSEVTSAVVRQNLRPEI 293
+ + APE +N ++ K DV+SFG+ +WE + PY + SEVT A++ + R
Sbjct: 536 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT-AMLEKGERMGC 594
Query: 294 PRCCPSSLANVMKRCWDANPDKRP 317
P CP + ++M CW + + RP
Sbjct: 595 PAGCPREMYDLMNLCWTYDVENRP 618
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/322 (30%), Positives = 144/322 (44%), Gaps = 65/322 (20%)
Query: 52 LVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQ-EVAVWHK 110
+V++ I +G FG V RG + G +VAVK+ EE RS F + E+
Sbjct: 31 IVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREE-----------RSWFREAEIYQTVM 79
Query: 111 LDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLA 170
L H N+ FI A +NG +V +Y G+L YL R +
Sbjct: 80 LRHENILGFIAAD--------NKDNGTWTQ----LWLVSDYHEHGSLFDYL---NRYTVT 124
Query: 171 FKVVVQLALDLARGLSYLHSQ--------KIVHRDVKTENMLLDKNRTVKIADFGVARVE 222
+ +++LAL A GL++LH + I HRD+K++N+L+ KN T IAD G+A
Sbjct: 125 VEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 184
Query: 223 ASNPNDM----TGETGTLGYMAPEVLNGN------PYNRKCDVYSFGICLWEIY--CC-- 268
S + + GT YMAPEVL+ + ++ D+Y+ G+ WEI C
Sbjct: 185 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIG 244
Query: 269 ------DMPYPDL-----SFSEVTSAVVRQNLRPEIP---RCCPS--SLANVMKRCWDAN 312
+PY DL S E+ V Q LRP IP + C + +A +M+ CW AN
Sbjct: 245 GIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYAN 304
Query: 313 PDKRPEMDEVVSMLEAIDTSKG 334
R + L + +G
Sbjct: 305 GAARLTALRIKKTLSQLSQQEG 326
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 123/264 (46%), Gaps = 27/264 (10%)
Query: 58 IARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPNVT 117
+ G FGTV +G Y + + + + EA AL+ E V +LD+P +
Sbjct: 35 LGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 91
Query: 118 KFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVVQL 177
+ IG S + +V+E G L YL +NR K K +++L
Sbjct: 92 RMIGICEAESWM-----------------LVMEMAELGPLNKYLQQNRHVK--DKNIIEL 132
Query: 178 ALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGET---G 234
++ G+ YL VHRD+ N+LL KI+DFG+++ ++ N +T
Sbjct: 133 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 192
Query: 235 TLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEI 293
+ + APE +N ++ K DV+SFG+ +WE + PY + SEVT A++ + R
Sbjct: 193 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT-AMLEKGERMGC 251
Query: 294 PRCCPSSLANVMKRCWDANPDKRP 317
P CP + ++M CW + + RP
Sbjct: 252 PAGCPREMYDLMNLCWTYDVENRP 275
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 123/264 (46%), Gaps = 27/264 (10%)
Query: 58 IARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPNVT 117
+ G FGTV +G Y + + + + EA AL+ E V +LD+P +
Sbjct: 35 LGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 91
Query: 118 KFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVVQL 177
+ IG S + +V+E G L YL +NR K K +++L
Sbjct: 92 RMIGICEAESWM-----------------LVMEMAELGPLNKYLQQNRHVK--DKNIIEL 132
Query: 178 ALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGET---G 234
++ G+ YL VHRD+ N+LL KI+DFG+++ ++ N +T
Sbjct: 133 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 192
Query: 235 TLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEI 293
+ + APE +N ++ K DV+SFG+ +WE + PY + SEVT A++ + R
Sbjct: 193 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT-AMLEKGERMGC 251
Query: 294 PRCCPSSLANVMKRCWDANPDKRP 317
P CP + ++M CW + + RP
Sbjct: 252 PAGCPREMYDLMNLCWTYDVENRP 275
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 123/264 (46%), Gaps = 27/264 (10%)
Query: 58 IARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPNVT 117
+ G FGTV +G Y + + + + EA AL+ E V +LD+P +
Sbjct: 15 LGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 71
Query: 118 KFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVVQL 177
+ IG S + +V+E G L YL +NR K K +++L
Sbjct: 72 RMIGICEAESWM-----------------LVMEMAELGPLNKYLQQNRHVK--DKNIIEL 112
Query: 178 ALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGET---G 234
++ G+ YL VHRD+ N+LL KI+DFG+++ ++ N +T
Sbjct: 113 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 172
Query: 235 TLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEI 293
+ + APE +N ++ K DV+SFG+ +WE + PY + SEVT A++ + R
Sbjct: 173 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT-AMLEKGERMGC 231
Query: 294 PRCCPSSLANVMKRCWDANPDKRP 317
P CP + ++M CW + + RP
Sbjct: 232 PAGCPREMYDLMNLCWTYDVENRP 255
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 123/264 (46%), Gaps = 27/264 (10%)
Query: 58 IARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPNVT 117
+ G FGTV +G Y + + + + EA AL+ E V +LD+P +
Sbjct: 19 LGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 75
Query: 118 KFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVVQL 177
+ IG S + +V+E G L YL +NR K K +++L
Sbjct: 76 RMIGICEAESWM-----------------LVMEMAELGPLNKYLQQNRHVK--DKNIIEL 116
Query: 178 ALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGET---G 234
++ G+ YL VHRD+ N+LL KI+DFG+++ ++ N +T
Sbjct: 117 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 176
Query: 235 TLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDM-PYPDLSFSEVTSAVVRQNLRPEI 293
+ + APE +N ++ K DV+SFG+ +WE + PY + SEVT A++ + R
Sbjct: 177 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT-AMLEKGERMGC 235
Query: 294 PRCCPSSLANVMKRCWDANPDKRP 317
P CP + ++M CW + + RP
Sbjct: 236 PAGCPREMYDLMNLCWTYDVENRP 259
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 123/264 (46%), Gaps = 27/264 (10%)
Query: 58 IARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPNVT 117
+ G FGTV +G Y + + + + EA AL+ E V +LD+P +
Sbjct: 33 LGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 89
Query: 118 KFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVVQL 177
+ IG S + +V+E G L YL +NR K K +++L
Sbjct: 90 RMIGICEAESWM-----------------LVMEMAELGPLNKYLQQNRHVK--DKNIIEL 130
Query: 178 ALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGET---G 234
++ G+ YL VHRD+ N+LL KI+DFG+++ ++ N +T
Sbjct: 131 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 190
Query: 235 TLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEI 293
+ + APE +N ++ K DV+SFG+ +WE + PY + SEVT A++ + R
Sbjct: 191 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT-AMLEKGERMGC 249
Query: 294 PRCCPSSLANVMKRCWDANPDKRP 317
P CP + ++M CW + + RP
Sbjct: 250 PAGCPREMYDLMNLCWTYDVENRP 273
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 140/319 (43%), Gaps = 50/319 (15%)
Query: 42 RQDWEIEPSKLVIKSVIARGTFGTVHRGLYD------GHDVAVKLLDWGEEGHRTEAEIA 95
R + E L + +G FG+V YD G VAVK L E H
Sbjct: 5 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH------- 57
Query: 96 ALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGG 155
LR F +E+ + L H N+ K+ G + +++ +++EYLP G
Sbjct: 58 -LRD-FEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--------------LIMEYLPYG 101
Query: 156 ALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIAD 215
+L+ YL + R K++ Q + +G+ YL +++ +HRD+ T N+L++ VKI D
Sbjct: 102 SLRDYLQAHAERIDHIKLL-QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGD 160
Query: 216 FGVARVEASNPNDMT----GETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEI--YCCD 269
FG+ +V + GE+ Y APE L + ++ DV+SFG+ L+E+ Y
Sbjct: 161 FGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTYIEK 219
Query: 270 MPYPDLSFSEVTS-------------AVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
P F + +++ N R P CP + +M CW+ N ++R
Sbjct: 220 SKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQR 279
Query: 317 PEMDEVVSMLEAIDTSKGG 335
P ++ ++ I + G
Sbjct: 280 PSFRDLALRVDQIRDNMAG 298
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 137/295 (46%), Gaps = 46/295 (15%)
Query: 58 IARGTFGTVHRGLYD------GHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKL 111
+ G FG V YD G VAVK L G+ IA L+ +E+ + L
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNH----IADLK----KEIEILRNL 68
Query: 112 DHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAF 171
H N+ K+ G I TE+G N +++E+LP G+LK YL KN+ K+
Sbjct: 69 YHENIVKYKG---------ICTEDG-----GNGIKLIMEFLPSGSLKEYLPKNKN-KINL 113
Query: 172 KVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMT- 230
K ++ A+ + +G+ YL S++ VHRD+ N+L++ VKI DFG+ + ++ T
Sbjct: 114 KQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTV 173
Query: 231 --GETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEI--YCCDMPYPDLSFSE------- 279
+ + APE L + + DV+SFG+ L E+ YC P F +
Sbjct: 174 KDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHG 233
Query: 280 ---VTSAV--VRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAI 329
VT V +++ R P CP + +M++CW+ P R ++ EA+
Sbjct: 234 QMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEAL 288
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 134/297 (45%), Gaps = 52/297 (17%)
Query: 58 IARGTFGTVHRGLYD------GHDVAVKLL--DWGEEGHRTEAEIAALRSAFTQEVAVWH 109
+ G FG V YD G VAVK L D G + RS + QE+ +
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQH----------RSGWKQEIDILR 71
Query: 110 KLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKL 169
L H ++ K+ G E +Q +V+EY+P G+L+ YL R +
Sbjct: 72 TLYHEHIIKYKGCCEDQGEKSLQ--------------LVMEYVPLGSLRDYL---PRHSI 114
Query: 170 AFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR-VEASNPND 228
++ A + G++YLHSQ +HR++ N+LLD +R VKI DFG+A+ V +
Sbjct: 115 GLAQLLLFAQQICEGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYY 174
Query: 229 MTGETGT--LGYMAPEVLNGNPYNRKCDVYSFGICLWEI--YCCDMPYPDLSFSEVT--- 281
E G + + APE L + DV+SFG+ L+E+ +C P F E+
Sbjct: 175 RVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIA 234
Query: 282 ---------SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAI 329
+ ++ + R P CP + ++MK CW+ RP + ++ +L+ +
Sbjct: 235 QGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTV 291
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 134/280 (47%), Gaps = 44/280 (15%)
Query: 57 VIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAA--LRSA--------FTQEVA 106
V+ G FGTV++GL W EG + + +A LR A E
Sbjct: 22 VLGSGAFGTVYKGL------------WIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 107 VWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRR 166
V +D+P+V + +G + S+ ++ + +P G L Y ++ +
Sbjct: 70 VMASVDNPHVCRLLGICLTST-----------------VQLITQLMPFGCLLDY-VREHK 111
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+ + ++ + +A+G++YL +++VHRD+ N+L+ + VKI DFG+A++ +
Sbjct: 112 DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171
Query: 227 NDMTGETGT--LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSA 283
+ E G + +MA E + Y + DV+S+G+ +WE+ PY + SE++S
Sbjct: 172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 231
Query: 284 VVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
+ + P+ P C + +M++CW + D RP+ E++
Sbjct: 232 LEKGERLPQ-PPICTIDVYMIMRKCWMIDADSRPKFRELI 270
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 134/280 (47%), Gaps = 44/280 (15%)
Query: 57 VIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIA--ALRSA--------FTQEVA 106
V+ G FGTV++GL W EG + + +A LR A E
Sbjct: 32 VLGSGAFGTVYKGL------------WIPEGEKVKIPVAIKELREATSPKANKEILDEAY 79
Query: 107 VWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRR 166
V +D+P+V + +G + S+ ++ + +P G L Y ++ +
Sbjct: 80 VMASVDNPHVCRLLGICLTST-----------------VQLITQLMPFGCLLDY-VREHK 121
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+ + ++ + +A+G++YL +++VHRD+ N+L+ + VKI DFG+A++ +
Sbjct: 122 DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 181
Query: 227 NDMTGETGT--LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSA 283
+ E G + +MA E + Y + DV+S+G+ +WE+ PY + SE++S
Sbjct: 182 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 241
Query: 284 VVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
+ + P+ P C + +M++CW + D RP+ E++
Sbjct: 242 LEKGERLPQ-PPICTIDVYMIMRKCWMIDADSRPKFRELI 280
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 134/280 (47%), Gaps = 44/280 (15%)
Query: 57 VIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIA--ALRSA--------FTQEVA 106
V+ G FGTV++GL W EG + + +A LR A E
Sbjct: 25 VLGSGAFGTVYKGL------------WIPEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 107 VWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRR 166
V +D+P+V + +G + S+ ++ + +P G L Y ++ +
Sbjct: 73 VMASVDNPHVCRLLGICLTST-----------------VQLITQLMPFGCLLDY-VREHK 114
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+ + ++ + +A+G++YL +++VHRD+ N+L+ + VKI DFG+A++ +
Sbjct: 115 DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 174
Query: 227 NDMTGETGT--LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSA 283
+ E G + +MA E + Y + DV+S+G+ +WE+ PY + SE++S
Sbjct: 175 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 234
Query: 284 VVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
+ + P+ P C + +M++CW + D RP+ E++
Sbjct: 235 LEKGERLPQ-PPICTIDVYMIMRKCWMIDADSRPKFRELI 273
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 125/288 (43%), Gaps = 43/288 (14%)
Query: 58 IARGTFGTVHRGLYDGH-------DVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHK 110
+ G FG V+ G G VAVK L E + E+ F E + K
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL---PEVCSEQDELD-----FLMEALIISK 81
Query: 111 LDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRR--- 167
+H N+ + IG ++ S +P I ++E + GG LK++L + R R
Sbjct: 82 FNHQNIVRCIGVSLQS-------------LPRFI---LLELMAGGDLKSFLRETRPRPSQ 125
Query: 168 --KLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLD---KNRTVKIADFGVAR-- 220
LA ++ +A D+A G YL +HRD+ N LL R KI DFG+AR
Sbjct: 126 PSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 185
Query: 221 VEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCD-MPYPDLSFSE 279
AS + +M PE + K D +SFG+ LWEI+ MPYP S E
Sbjct: 186 YRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 245
Query: 280 VTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLE 327
V V R + P+ CP + +M +CW P+ RP ++ +E
Sbjct: 246 VLEFVTSGG-RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 292
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 125/288 (43%), Gaps = 43/288 (14%)
Query: 58 IARGTFGTVHRGLYDGH-------DVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHK 110
+ G FG V+ G G VAVK L E + E+ F E + K
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL---PEVCSEQDELD-----FLMEALIISK 89
Query: 111 LDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRR--- 167
+H N+ + IG ++ S +P I ++E + GG LK++L + R R
Sbjct: 90 FNHQNIVRCIGVSLQS-------------LPRFI---LLELMAGGDLKSFLRETRPRPSQ 133
Query: 168 --KLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLD---KNRTVKIADFGVAR-- 220
LA ++ +A D+A G YL +HRD+ N LL R KI DFG+AR
Sbjct: 134 PSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 193
Query: 221 VEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCD-MPYPDLSFSE 279
AS + +M PE + K D +SFG+ LWEI+ MPYP S E
Sbjct: 194 YRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 253
Query: 280 VTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLE 327
V V R + P+ CP + +M +CW P+ RP ++ +E
Sbjct: 254 VLEFVTSGG-RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 300
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 141/317 (44%), Gaps = 57/317 (17%)
Query: 45 WEIEPSKLVIKSVIARGTFGTV-------HRGLYDGHDVAVKLLDWGEEGHRTEAEIAAL 97
WE LV+ + G FG V +G VAVK+L + A + L
Sbjct: 18 WEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKML-------KENASPSEL 70
Query: 98 RSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGAL 157
R + E V +++HP+V K GA +++G + ++VEY G+L
Sbjct: 71 RDLLS-EFNVLKQVNHPHVIKLYGAC---------SQDGPL-------LLIVEYAKYGSL 113
Query: 158 KTYLIKNRR----------------------RKLAFKVVVQLALDLARGLSYLHSQKIVH 195
+ +L ++R+ R L ++ A +++G+ YL +VH
Sbjct: 114 RGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMSLVH 173
Query: 196 RDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETGTL--GYMAPEVLNGNPYNRKC 253
RD+ N+L+ + R +KI+DFG++R + + G + +MA E L + Y +
Sbjct: 174 RDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQS 233
Query: 254 DVYSFGICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDAN 312
DV+SFG+ LWEI PYP + E +++ R E P C + +M +CW
Sbjct: 234 DVWSFGVLLWEIVTLGGNPYPGIP-PERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQE 292
Query: 313 PDKRPEMDEVVSMLEAI 329
PDKRP ++ LE +
Sbjct: 293 PDKRPVFADISKDLEKM 309
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 125/288 (43%), Gaps = 43/288 (14%)
Query: 58 IARGTFGTVHRGLYDGH-------DVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHK 110
+ G FG V+ G G VAVK L E + E+ F E + K
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP---EVCSEQDELD-----FLMEALIISK 106
Query: 111 LDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRR--- 167
+H N+ + IG ++ S +P I ++E + GG LK++L + R R
Sbjct: 107 FNHQNIVRCIGVSLQS-------------LPRFI---LLELMAGGDLKSFLRETRPRPSQ 150
Query: 168 --KLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLD---KNRTVKIADFGVAR-- 220
LA ++ +A D+A G YL +HRD+ N LL R KI DFG+AR
Sbjct: 151 PSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 210
Query: 221 VEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCD-MPYPDLSFSE 279
AS + +M PE + K D +SFG+ LWEI+ MPYP S E
Sbjct: 211 YRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 270
Query: 280 VTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLE 327
V V R + P+ CP + +M +CW P+ RP ++ +E
Sbjct: 271 VLEFVTSGG-RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 317
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 125/288 (43%), Gaps = 43/288 (14%)
Query: 58 IARGTFGTVHRGLYDGH-------DVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHK 110
+ G FG V+ G G VAVK L E + E+ F E + K
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP---EVCSEQDELD-----FLMEALIISK 89
Query: 111 LDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRR--- 167
+H N+ + IG ++ S +P I ++E + GG LK++L + R R
Sbjct: 90 FNHQNIVRCIGVSLQS-------------LPRFI---LMELMAGGDLKSFLRETRPRPSQ 133
Query: 168 --KLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLD---KNRTVKIADFGVAR-- 220
LA ++ +A D+A G YL +HRD+ N LL R KI DFG+AR
Sbjct: 134 PSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 193
Query: 221 VEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCD-MPYPDLSFSE 279
AS + +M PE + K D +SFG+ LWEI+ MPYP S E
Sbjct: 194 YRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 253
Query: 280 VTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLE 327
V V R + P+ CP + +M +CW P+ RP ++ +E
Sbjct: 254 VLEFVTSGG-RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 300
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 125/288 (43%), Gaps = 43/288 (14%)
Query: 58 IARGTFGTVHRGLYDGH-------DVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHK 110
+ G FG V+ G G VAVK L E + E+ F E + K
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL---PEVCSEQDELD-----FLMEALIISK 96
Query: 111 LDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRR--- 167
+H N+ + IG ++ S +P I ++E + GG LK++L + R R
Sbjct: 97 FNHQNIVRCIGVSLQS-------------LPRFI---LLELMAGGDLKSFLRETRPRPSQ 140
Query: 168 --KLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLD---KNRTVKIADFGVAR-- 220
LA ++ +A D+A G YL +HRD+ N LL R KI DFG+AR
Sbjct: 141 PSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 200
Query: 221 VEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCD-MPYPDLSFSE 279
AS + +M PE + K D +SFG+ LWEI+ MPYP S E
Sbjct: 201 YRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 260
Query: 280 VTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLE 327
V V R + P+ CP + +M +CW P+ RP ++ +E
Sbjct: 261 VLEFVTSGG-RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 307
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 125/288 (43%), Gaps = 43/288 (14%)
Query: 58 IARGTFGTVHRGLYDGH-------DVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHK 110
+ G FG V+ G G VAVK L E + E+ F E + K
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP---EVCSEQDELD-----FLMEALIISK 116
Query: 111 LDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRR--- 167
+H N+ + IG ++ S +P I ++E + GG LK++L + R R
Sbjct: 117 FNHQNIVRCIGVSLQS-------------LPRFI---LLELMAGGDLKSFLRETRPRPSQ 160
Query: 168 --KLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLD---KNRTVKIADFGVAR-- 220
LA ++ +A D+A G YL +HRD+ N LL R KI DFG+AR
Sbjct: 161 PSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 220
Query: 221 VEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCD-MPYPDLSFSE 279
AS + +M PE + K D +SFG+ LWEI+ MPYP S E
Sbjct: 221 YRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 280
Query: 280 VTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLE 327
V V R + P+ CP + +M +CW P+ RP ++ +E
Sbjct: 281 VLEFVTSGG-RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 327
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 125/288 (43%), Gaps = 43/288 (14%)
Query: 58 IARGTFGTVHRGLYDGH-------DVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHK 110
+ G FG V+ G G VAVK L E + E+ F E + K
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL---PEVCSEQDELD-----FLMEALIISK 90
Query: 111 LDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRR--- 167
+H N+ + IG ++ S +P I ++E + GG LK++L + R R
Sbjct: 91 FNHQNIVRCIGVSLQS-------------LPRFI---LLELMAGGDLKSFLRETRPRPSQ 134
Query: 168 --KLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLD---KNRTVKIADFGVAR-- 220
LA ++ +A D+A G YL +HRD+ N LL R KI DFG+AR
Sbjct: 135 PSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 194
Query: 221 VEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCD-MPYPDLSFSE 279
AS + +M PE + K D +SFG+ LWEI+ MPYP S E
Sbjct: 195 YRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 254
Query: 280 VTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLE 327
V V R + P+ CP + +M +CW P+ RP ++ +E
Sbjct: 255 VLEFVTSGG-RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 125/288 (43%), Gaps = 43/288 (14%)
Query: 58 IARGTFGTVHRGLYDGH-------DVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHK 110
+ G FG V+ G G VAVK L E + E+ F E + K
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL---PEVCSEQDELD-----FLMEALIISK 104
Query: 111 LDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRR--- 167
+H N+ + IG ++ S +P I ++E + GG LK++L + R R
Sbjct: 105 FNHQNIVRCIGVSLQS-------------LPRFI---LMELMAGGDLKSFLRETRPRPSQ 148
Query: 168 --KLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLD---KNRTVKIADFGVAR-- 220
LA ++ +A D+A G YL +HRD+ N LL R KI DFG+AR
Sbjct: 149 PSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 208
Query: 221 VEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCD-MPYPDLSFSE 279
AS + +M PE + K D +SFG+ LWEI+ MPYP S E
Sbjct: 209 YRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 268
Query: 280 VTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLE 327
V V R + P+ CP + +M +CW P+ RP ++ +E
Sbjct: 269 VLEFVTSGG-RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 156/338 (46%), Gaps = 55/338 (16%)
Query: 30 PIGKASNFLKKQRQDWEIEPSKLVIKSVIARGTFGTVHRGLY--DGHD----VAVKLLDW 83
P KA+ L + ++ E+ K V+ G FGTVH+G++ +G V +K+++
Sbjct: 16 PSEKANKVLARIFKETELRKLK-----VLGSGVFGTVHKGVWIPEGESIKIPVCIKVIE- 69
Query: 84 GEEGHRTEAEIAALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSN 143
+ G ++ A T + LDH ++ + +G GSS
Sbjct: 70 DKSGRQS-------FQAVTDHMLAIGSLDHAHIVRLLGLCPGSS---------------- 106
Query: 144 ICCVVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENM 203
+V +YLP G+L + ++ R L ++++ + +A+G+ YL +VHR++ N+
Sbjct: 107 -LQLVTQYLPLGSLLDH-VRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNV 164
Query: 204 LLDKNRTVKIADFGVARVEASNPND---MTGETGT-LGYMAPEVLNGNPYNRKCDVYSFG 259
LL V++ADFGVA + P+D + E T + +MA E ++ Y + DV+S+G
Sbjct: 165 LLKSPSQVQVADFGVA--DLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYG 222
Query: 260 ICLWEIYCCDM-PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPE 318
+ +WE+ PY L +EV ++ + R P+ C + VM +CW + + RP
Sbjct: 223 VTVWELMTFGAEPYAGLRLAEVPD-LLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPT 281
Query: 319 MDEVVSMLE----------AIDTSKGGGMIPGDQPQGC 346
E+ + I G G+ PG +P G
Sbjct: 282 FKELANEFTRMARDPPRYLVIKRESGPGIAPGPEPHGL 319
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 124/288 (43%), Gaps = 43/288 (14%)
Query: 58 IARGTFGTVHRGLYDGH-------DVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHK 110
+ G FG V+ G G VAVK L E + E+ F E + K
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP---EVCSEQDELD-----FLMEALIISK 130
Query: 111 LDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRR--- 167
+H N+ + IG ++ S +P I ++E + GG LK++L + R R
Sbjct: 131 FNHQNIVRCIGVSLQS-------------LPRFI---LLELMAGGDLKSFLRETRPRPSQ 174
Query: 168 --KLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLD---KNRTVKIADFGVARVE 222
LA ++ +A D+A G YL +HRD+ N LL R KI DFG+AR
Sbjct: 175 PSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 234
Query: 223 ASNPNDMTGETGTL--GYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCD-MPYPDLSFSE 279
G L +M PE + K D +SFG+ LWEI+ MPYP S E
Sbjct: 235 YRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 294
Query: 280 VTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLE 327
V V R + P+ CP + +M +CW P+ RP ++ +E
Sbjct: 295 VLEFVTSGG-RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 341
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 124/288 (43%), Gaps = 43/288 (14%)
Query: 58 IARGTFGTVHRGLYDGH-------DVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHK 110
+ G FG V+ G G VAVK L E + E+ F E + K
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL---PEVCSEQDELD-----FLMEALIISK 107
Query: 111 LDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRR--- 167
+H N+ + IG ++ S +P I ++E + GG LK++L + R R
Sbjct: 108 FNHQNIVRCIGVSLQS-------------LPRFI---LLELMAGGDLKSFLRETRPRPSQ 151
Query: 168 --KLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLD---KNRTVKIADFGVARVE 222
LA ++ +A D+A G YL +HRD+ N LL R KI DFG+AR
Sbjct: 152 PSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 211
Query: 223 ASNPNDMTGETGTL--GYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCD-MPYPDLSFSE 279
G L +M PE + K D +SFG+ LWEI+ MPYP S E
Sbjct: 212 YRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 271
Query: 280 VTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLE 327
V V R + P+ CP + +M +CW P+ RP ++ +E
Sbjct: 272 VLEFVTSGG-RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 318
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 135/280 (48%), Gaps = 44/280 (15%)
Query: 57 VIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIA--ALRSA--------FTQEVA 106
V++ G FGTV++GL W EG + + +A LR A E
Sbjct: 29 VLSSGAFGTVYKGL------------WIPEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 107 VWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRR 166
V +D+P+V + +G + S+ ++++ +P G L Y ++ +
Sbjct: 77 VMASVDNPHVCRLLGICLTST-----------------VQLIMQLMPFGCLLDY-VREHK 118
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+ + ++ + +A+G++YL +++VHRD+ N+L+ + VKI DFG+A++ +
Sbjct: 119 DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 178
Query: 227 NDMTGETGT--LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSA 283
+ E G + +MA E + Y + DV+S+G+ +WE+ PY + SE++S
Sbjct: 179 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 238
Query: 284 VVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
+ + P+ P C + +M +CW + D RP+ E++
Sbjct: 239 LEKGERLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 277
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 128/274 (46%), Gaps = 37/274 (13%)
Query: 64 GTVHRGLYDGHDVAVKLL---DWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPNVTKFI 120
G + +G + G+D+ VK+L DW R F +E HPNV +
Sbjct: 24 GELWKGRWQGNDIVVKVLKVRDWSTRKSRD----------FNEECPRLRIFSHPNVLPVL 73
Query: 121 GATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALD 180
GA H ++ ++P G+L L + + V+ ALD
Sbjct: 74 GACQSPPAPH--------------PTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALD 119
Query: 181 LARGLSYLHSQK--IVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETGTLGY 238
+ARG+++LH+ + I + + ++++D++ T +I+ V + +P M +
Sbjct: 120 MARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADV-KFSFQSPGRMYAP----AW 174
Query: 239 MAPEVLNGNPYN---RKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPR 295
+APE L P + R D++SF + LWE+ ++P+ DLS E+ V + LRP IP
Sbjct: 175 VAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPP 234
Query: 296 CCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAI 329
++ +MK C + +P KRP+ D +V +LE +
Sbjct: 235 GISPHVSKLMKICMNEDPAKRPKFDMIVPILEKM 268
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 134/280 (47%), Gaps = 44/280 (15%)
Query: 57 VIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIA--ALRSA--------FTQEVA 106
V+ G FGTV++GL W EG + + +A LR A E
Sbjct: 23 VLGSGAFGTVYKGL------------WIPEGEKVKIPVAIKELREATSPKANKEILDEAY 70
Query: 107 VWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRR 166
V +D+P+V + +G + S+ ++++ +P G L Y ++ +
Sbjct: 71 VMASVDNPHVCRLLGICLTST-----------------VQLIMQLMPFGXLLDY-VREHK 112
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+ + ++ + +A+G++YL +++VHRD+ N+L+ + VKI DFG+A++ +
Sbjct: 113 DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 172
Query: 227 NDMTGETGT--LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSA 283
+ E G + +MA E + Y + DV+S+G+ +WE+ PY + SE++S
Sbjct: 173 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 232
Query: 284 VVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
+ + P+ P C + +M +CW + D RP+ E++
Sbjct: 233 LEKGERLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 271
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 129/307 (42%), Gaps = 45/307 (14%)
Query: 43 QDWEIEPSKLVIKSVIARGTFGTVHRGLYDGH-------DVAVKLLDWGEEGHRTEAEIA 95
+ WE + L + G FG V G VAVK+L EA ++
Sbjct: 39 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 98
Query: 96 ALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCV-------- 147
L+ + H H N+ +GA T G V + + CC
Sbjct: 99 ELK-------IMSHLGQHENIVNLLGAC---------THGGPVLVITEYCCYGDLLNFLR 142
Query: 148 ----VVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENM 203
V+E P A+ + R ++ + +A+G+++L S+ +HRDV N+
Sbjct: 143 RKSRVLETDPAFAIANSTLSTRD-------LLHFSSQVAQGMAFLASKNCIHRDVAARNV 195
Query: 204 LLDKNRTVKIADFGVARVEASNPNDMTGETGTL--GYMAPEVLNGNPYNRKCDVYSFGIC 261
LL KI DFG+AR ++ N + L +MAPE + Y + DV+S+GI
Sbjct: 196 LLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGIL 255
Query: 262 LWEIYCCDM-PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMD 320
LWEI+ + PYP + + +V+ + P P ++ ++M+ CW P RP
Sbjct: 256 LWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQ 315
Query: 321 EVVSMLE 327
++ S L+
Sbjct: 316 QICSFLQ 322
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 88/156 (56%), Gaps = 3/156 (1%)
Query: 174 VVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDM-TGE 232
++ + +ARG+ +L S+K +HRD+ N+LL +N VKI DFG+AR NP+ + G+
Sbjct: 201 LISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGD 260
Query: 233 TGT-LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSAVVRQNLR 290
T L +MAPE + Y+ K DV+S+G+ LWEI+ PYP + E + +R+ +R
Sbjct: 261 TRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRLREGMR 320
Query: 291 PEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSML 326
P + +M CW +P +RP E+V L
Sbjct: 321 MRAPEYSTPEIYQIMLDCWHRDPKERPRFAELVEKL 356
Score = 34.3 bits (77), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 52/143 (36%), Gaps = 29/143 (20%)
Query: 30 PIGKASNFLKKQRQDWEIEPSKLVIKSVIARGTFGTVHRGLYDG-------HDVAVKLLD 82
P+ + L WE +L + + RG FG V + G VAVK+L
Sbjct: 7 PLDEQCERLPYDASKWEFARERLKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVKMLK 66
Query: 83 WGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPS 142
G T +E AL + + H H NV +GA T+ G M
Sbjct: 67 EGA----TASEYKALMTELKILTHIGH---HLNVVNLLGAC---------TKQGGPLM-- 108
Query: 143 NICCVVVEYLPGGALKTYLIKNR 165
V+VEY G L YL R
Sbjct: 109 ----VIVEYCKYGNLSNYLKSKR 127
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 134/280 (47%), Gaps = 44/280 (15%)
Query: 57 VIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIA--ALRSA--------FTQEVA 106
V+ G FGTV++GL W EG + + +A LR A E
Sbjct: 25 VLGSGAFGTVYKGL------------WIPEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 107 VWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRR 166
V +D+P+V + +G + S+ ++++ +P G L Y ++ +
Sbjct: 73 VMASVDNPHVCRLLGICLTST-----------------VQLIMQLMPFGCLLDY-VREHK 114
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+ + ++ + +A+G++YL +++VHRD+ N+L+ + VKI DFG+A++ +
Sbjct: 115 DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 174
Query: 227 NDMTGETGT--LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSA 283
+ E G + +MA E + Y + DV+S+G+ +WE+ PY + SE++S
Sbjct: 175 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 234
Query: 284 VVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
+ + P+ P C + +M +CW + D RP+ E++
Sbjct: 235 LEKGERLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 273
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 134/280 (47%), Gaps = 44/280 (15%)
Query: 57 VIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIA--ALRSA--------FTQEVA 106
V+ G FGTV++GL W EG + + +A LR A E
Sbjct: 24 VLGSGAFGTVYKGL------------WIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 107 VWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRR 166
V +D+P+V + +G + S+ ++++ +P G L Y ++ +
Sbjct: 72 VMASVDNPHVCRLLGICLTST-----------------VQLIMQLMPFGCLLDY-VREHK 113
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+ + ++ + +A+G++YL +++VHRD+ N+L+ + VKI DFG A++ +
Sbjct: 114 DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE 173
Query: 227 NDMTGETGT--LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSA 283
+ E G + +MA E + Y + DV+S+G+ +WE+ PY + SE++S
Sbjct: 174 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 233
Query: 284 VVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
+ + P+ P C + +M++CW + D RP+ E++
Sbjct: 234 LEKGERLPQ-PPICTIDVYMIMRKCWMIDADSRPKFRELI 272
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 134/280 (47%), Gaps = 44/280 (15%)
Query: 57 VIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIA--ALRSA--------FTQEVA 106
V+ G FGTV++GL W EG + + +A LR A E
Sbjct: 22 VLGSGAFGTVYKGL------------WIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 107 VWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRR 166
V +D+P+V + +G + S+ ++++ +P G L Y ++ +
Sbjct: 70 VMASVDNPHVCRLLGICLTST-----------------VQLIMQLMPFGCLLDY-VREHK 111
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+ + ++ + +A+G++YL +++VHRD+ N+L+ + VKI DFG+A++ +
Sbjct: 112 DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171
Query: 227 NDMTGETGT--LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSA 283
+ E G + +MA E + Y + DV+S+G+ +WE+ PY + SE++S
Sbjct: 172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 231
Query: 284 VVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
+ + P+ P C + +M +CW + D RP+ E++
Sbjct: 232 LEKGERLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 270
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 131/309 (42%), Gaps = 40/309 (12%)
Query: 43 QDWEIEPSKLVIKSVIARGTFGTVHRGLYDGH-------DVAVKLLDWGEEGHRTEAEIA 95
+ WE + L + G FG V G VAVK+L EA ++
Sbjct: 24 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 83
Query: 96 ALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCV-------- 147
L+ + H H N+ +GA T G V + + CC
Sbjct: 84 ELK-------IMSHLGQHENIVNLLGAC---------THGGPVLVITEYCCYGDLLNFLR 127
Query: 148 -VVEYLPGGALK-----TYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTE 201
E + G +L L K R L + ++ + +A+G+++L S+ +HRDV
Sbjct: 128 RKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAAR 187
Query: 202 NMLLDKNRTVKIADFGVARVEASNPNDMTGETGTL--GYMAPEVLNGNPYNRKCDVYSFG 259
N+LL KI DFG+AR ++ N + L +MAPE + Y + DV+S+G
Sbjct: 188 NVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYG 247
Query: 260 ICLWEIYCCDM-PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPE 318
I LWEI+ + PYP + + +V+ + P P ++ ++M+ CW P RP
Sbjct: 248 ILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPT 307
Query: 319 MDEVVSMLE 327
++ S L+
Sbjct: 308 FQQICSFLQ 316
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 134/280 (47%), Gaps = 44/280 (15%)
Query: 57 VIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIA--ALRSA--------FTQEVA 106
V+ G FGTV++GL W EG + + +A LR A E
Sbjct: 24 VLGSGAFGTVYKGL------------WIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 107 VWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRR 166
V +D+P+V + +G + S+ ++++ +P G L Y ++ +
Sbjct: 72 VMASVDNPHVCRLLGICLTST-----------------VQLIMQLMPFGCLLDY-VREHK 113
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+ + ++ + +A+G++YL +++VHRD+ N+L+ + VKI DFG+A++ +
Sbjct: 114 DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 173
Query: 227 NDMTGETGT--LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSA 283
+ E G + +MA E + Y + DV+S+G+ +WE+ PY + SE++S
Sbjct: 174 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 233
Query: 284 VVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
+ + P+ P C + +M +CW + D RP+ E++
Sbjct: 234 LEKGERLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 272
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 134/297 (45%), Gaps = 52/297 (17%)
Query: 58 IARGTFGTVHRGLYD------GHDVAVKLL--DWGEEGHRTEAEIAALRSAFTQEVAVWH 109
+ G FG V YD G VAVK L D G + RS + QE+ +
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQH----------RSGWKQEIDILR 71
Query: 110 KLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKL 169
L H ++ K+ G E +Q +V+EY+P G+L+ YL R +
Sbjct: 72 TLYHEHIIKYKGCCEDQGEKSLQ--------------LVMEYVPLGSLRDYL---PRHSI 114
Query: 170 AFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR-VEASNPND 228
++ A + G++YLH+Q +HR++ N+LLD +R VKI DFG+A+ V +
Sbjct: 115 GLAQLLLFAQQICEGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYY 174
Query: 229 MTGETGT--LGYMAPEVLNGNPYNRKCDVYSFGICLWEI--YCCDMPYPDLSFSEVT--- 281
E G + + APE L + DV+SFG+ L+E+ +C P F E+
Sbjct: 175 RVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIA 234
Query: 282 ---------SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAI 329
+ ++ + R P CP + ++MK CW+ RP + ++ +L+ +
Sbjct: 235 QGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTV 291
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 134/280 (47%), Gaps = 44/280 (15%)
Query: 57 VIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIA--ALRSA--------FTQEVA 106
V+ G FGTV++GL W EG + + +A LR A E
Sbjct: 23 VLGSGAFGTVYKGL------------WIPEGEKVKIPVAIKELREATSPKANKEILDEAY 70
Query: 107 VWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRR 166
V +D+P+V + +G + S+ ++++ +P G L Y ++ +
Sbjct: 71 VMASVDNPHVCRLLGICLTST-----------------VQLIMQLMPFGCLLDY-VREHK 112
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+ + ++ + +A+G++YL +++VHRD+ N+L+ + VKI DFG+A++ +
Sbjct: 113 DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 172
Query: 227 NDMTGETGT--LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSA 283
+ E G + +MA E + Y + DV+S+G+ +WE+ PY + SE++S
Sbjct: 173 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 232
Query: 284 VVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
+ + P+ P C + +M +CW + D RP+ E++
Sbjct: 233 LEKGERLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 271
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 134/280 (47%), Gaps = 44/280 (15%)
Query: 57 VIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIA--ALRSA--------FTQEVA 106
V++ G FGTV++GL W EG + + +A LR A E
Sbjct: 22 VLSSGAFGTVYKGL------------WIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 107 VWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRR 166
V +D+P+V + +G + S+ ++ + +P G L Y ++ +
Sbjct: 70 VMASVDNPHVCRLLGICLTST-----------------VQLITQLMPFGCLLDY-VREHK 111
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+ + ++ + +A+G++YL +++VHRD+ N+L+ + VKI DFG+A++ +
Sbjct: 112 DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171
Query: 227 NDMTGETGT--LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSA 283
+ E G + +MA E + Y + DV+S+G+ +WE+ PY + SE++S
Sbjct: 172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 231
Query: 284 VVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
+ + P+ P C + +M +CW + D RP+ E++
Sbjct: 232 LEKGERLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 270
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 134/280 (47%), Gaps = 44/280 (15%)
Query: 57 VIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIA--ALRSA--------FTQEVA 106
V++ G FGTV++GL W EG + + +A LR A E
Sbjct: 29 VLSSGAFGTVYKGL------------WIPEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 107 VWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRR 166
V +D+P+V + +G + S+ ++ + +P G L Y ++ +
Sbjct: 77 VMASVDNPHVCRLLGICLTST-----------------VQLITQLMPFGCLLDY-VREHK 118
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+ + ++ + +A+G++YL +++VHRD+ N+L+ + VKI DFG+A++ +
Sbjct: 119 DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 178
Query: 227 NDMTGETGT--LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSA 283
+ E G + +MA E + Y + DV+S+G+ +WE+ PY + SE++S
Sbjct: 179 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 238
Query: 284 VVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
+ + P+ P C + +M +CW + D RP+ E++
Sbjct: 239 LEKGERLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 277
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 134/280 (47%), Gaps = 44/280 (15%)
Query: 57 VIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIA--ALRSA--------FTQEVA 106
V+ G FGTV++GL W EG + + +A LR A E
Sbjct: 26 VLGSGAFGTVYKGL------------WIPEGEKVKIPVAIKELREATSPKANKEILDEAY 73
Query: 107 VWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRR 166
V +D+P+V + +G + S+ ++++ +P G L Y ++ +
Sbjct: 74 VMASVDNPHVCRLLGICLTST-----------------VQLIMQLMPFGCLLDY-VREHK 115
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+ + ++ + +A+G++YL +++VHRD+ N+L+ + VKI DFG+A++ +
Sbjct: 116 DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 175
Query: 227 NDMTGETGT--LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSA 283
+ E G + +MA E + Y + DV+S+G+ +WE+ PY + SE++S
Sbjct: 176 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 235
Query: 284 VVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
+ + P+ P C + +M +CW + D RP+ E++
Sbjct: 236 LEKGERLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 274
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 133/280 (47%), Gaps = 44/280 (15%)
Query: 57 VIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIA--ALRSA--------FTQEVA 106
V+ G FGTV++GL W EG + + +A LR A E
Sbjct: 22 VLGSGAFGTVYKGL------------WIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 107 VWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRR 166
V +D+P+V + +G + S+ ++ + +P G L Y ++ +
Sbjct: 70 VMASVDNPHVCRLLGICLTST-----------------VQLITQLMPFGXLLDY-VREHK 111
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+ + ++ + +A+G++YL +++VHRD+ N+L+ + VKI DFG+A++ +
Sbjct: 112 DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171
Query: 227 NDMTGETGT--LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSA 283
+ E G + +MA E + Y + DV+S+G+ +WE+ PY + SE++S
Sbjct: 172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 231
Query: 284 VVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
+ + P+ P C + +M +CW + D RP+ E++
Sbjct: 232 LEKGERLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 270
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 140/307 (45%), Gaps = 49/307 (15%)
Query: 47 IEPSKLVIKSVIARGTFGTVHRGLYD------GHDVAVKLLDWGEEGHRTEAEIAALRSA 100
E L S + +G FG+V YD G VAVK L + +
Sbjct: 4 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRD--------- 54
Query: 101 FTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTY 160
F +E+ + L + K+ G + G ++ +V+EYLP G L+ +
Sbjct: 55 FQREIQILKALHSDFIVKYRGVSYGPGRPELR--------------LVMEYLPSGCLRDF 100
Query: 161 LIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR 220
L ++R R A ++++ + + +G+ YL S++ VHRD+ N+L++ VKIADFG+A+
Sbjct: 101 LQRHRARLDASRLLL-YSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAK 159
Query: 221 VEASNPNDMT----GETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEI--YCCDMPYPD 274
+ + + G++ Y APE L+ N ++R+ DV+SFG+ L+E+ YC P
Sbjct: 160 LLPLDKDXXVVREPGQSPIFWY-APESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPS 218
Query: 275 LSFSEV------TSAVVRQNL------RPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 322
F + A+ R R P CP+ + +MK CW +P RP +
Sbjct: 219 AEFLRMMGCERDVPALCRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSAL 278
Query: 323 VSMLEAI 329
L+ +
Sbjct: 279 GPQLDML 285
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 145/311 (46%), Gaps = 50/311 (16%)
Query: 57 VIARGTFGTVHRGLY--DGHD----VAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHK 110
V+ G FGTVH+G++ +G V +K+++ + G ++ A T +
Sbjct: 20 VLGSGVFGTVHKGVWIPEGESIKIPVCIKVIE-DKSGRQS-------FQAVTDHMLAIGS 71
Query: 111 LDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLA 170
LDH ++ + +G GSS +V +YLP G+L + ++ R L
Sbjct: 72 LDHAHIVRLLGLCPGSS-----------------LQLVTQYLPLGSLLDH-VRQHRGALG 113
Query: 171 FKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPND-- 228
++++ + +A+G+ YL +VHR++ N+LL V++ADFGVA + P+D
Sbjct: 114 PQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVA--DLLPPDDKQ 171
Query: 229 -MTGETGT-LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDM-PYPDLSFSEVTSAVV 285
+ E T + +MA E ++ Y + DV+S+G+ +WE+ PY L +EV ++
Sbjct: 172 LLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPD-LL 230
Query: 286 RQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLE----------AIDTSKGG 335
+ R P+ C + VM +CW + + RP E+ + I G
Sbjct: 231 EKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARDPPRYLVIKRESGP 290
Query: 336 GMIPGDQPQGC 346
G+ PG +P G
Sbjct: 291 GIAPGPEPHGL 301
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 133/280 (47%), Gaps = 44/280 (15%)
Query: 57 VIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIA--ALRSA--------FTQEVA 106
V+ G FGTV++GL W EG + + +A LR A E
Sbjct: 29 VLGSGAFGTVYKGL------------WIPEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 107 VWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRR 166
V +D+P+V + +G + S+ ++ + +P G L Y ++ +
Sbjct: 77 VMASVDNPHVCRLLGICLTST-----------------VQLITQLMPFGCLLDY-VREHK 118
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+ + ++ + +A+G++YL +++VHRD+ N+L+ + VKI DFG+A++ +
Sbjct: 119 DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 178
Query: 227 NDMTGETGT--LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSA 283
+ E G + +MA E + Y + DV+S+G+ +WE+ PY + SE++S
Sbjct: 179 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 238
Query: 284 VVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
+ + P+ P C + +M +CW + D RP+ E++
Sbjct: 239 LEKGERLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 277
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 133/280 (47%), Gaps = 44/280 (15%)
Query: 57 VIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIA--ALRSA--------FTQEVA 106
V+ G FGTV++GL W EG + + +A LR A E
Sbjct: 25 VLGSGAFGTVYKGL------------WIPEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 107 VWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRR 166
V +D+P+V + +G + S+ ++ + +P G L Y ++ +
Sbjct: 73 VMASVDNPHVCRLLGICLTST-----------------VQLITQLMPFGCLLDY-VREHK 114
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+ + ++ + +A+G++YL +++VHRD+ N+L+ + VKI DFG+A++ +
Sbjct: 115 DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 174
Query: 227 NDMTGETGT--LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSA 283
+ E G + +MA E + Y + DV+S+G+ +WE+ PY + SE++S
Sbjct: 175 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 234
Query: 284 VVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
+ + P+ P C + +M +CW + D RP+ E++
Sbjct: 235 LEKGERLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 273
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 133/280 (47%), Gaps = 44/280 (15%)
Query: 57 VIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIA--ALRSA--------FTQEVA 106
V+ G FGTV++GL W EG + + +A LR A E
Sbjct: 47 VLGSGAFGTVYKGL------------WIPEGEKVKIPVAIKELREATSPKANKEILDEAY 94
Query: 107 VWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRR 166
V +D+P+V + +G + S+ ++ + +P G L Y ++ +
Sbjct: 95 VMASVDNPHVCRLLGICLTST-----------------VQLITQLMPFGCLLDY-VREHK 136
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+ + ++ + +A+G++YL +++VHRD+ N+L+ + VKI DFG+A++ +
Sbjct: 137 DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 196
Query: 227 NDMTGETGT--LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSA 283
+ E G + +MA E + Y + DV+S+G+ +WE+ PY + SE++S
Sbjct: 197 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 256
Query: 284 VVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
+ + P+ P C + +M +CW + D RP+ E++
Sbjct: 257 LEKGERLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 295
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 142/313 (45%), Gaps = 49/313 (15%)
Query: 47 IEPSKLVIKSVIARGTFGTVHRGLYD------GHDVAVKLLDWGEEGHRTEAEIAALRSA 100
E L S + +G FG+V YD G VAVK L + +
Sbjct: 8 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRD--------- 58
Query: 101 FTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTY 160
F +E+ + L + K+ G + G ++ +V+EYLP G L+ +
Sbjct: 59 FQREIQILKALHSDFIVKYRGVSYGPGRQSLR--------------LVMEYLPSGCLRDF 104
Query: 161 LIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR 220
L ++R R A ++++ + + +G+ YL S++ VHRD+ N+L++ VKIADFG+A+
Sbjct: 105 LQRHRARLDASRLLL-YSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAK 163
Query: 221 VEASNPNDMT----GETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEI--YCCDMPYPD 274
+ + + G++ Y APE L+ N ++R+ DV+SFG+ L+E+ YC P
Sbjct: 164 LLPLDKDYYVVREPGQSPIFWY-APESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPS 222
Query: 275 LSFSEV------TSAVVRQNL------RPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 322
F + A+ R R P CP+ + +MK CW +P RP +
Sbjct: 223 AEFLRMMGCERDVPALCRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSAL 282
Query: 323 VSMLEAIDTSKGG 335
L+ + + G
Sbjct: 283 GPQLDMLWSGSRG 295
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 133/280 (47%), Gaps = 44/280 (15%)
Query: 57 VIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIA--ALRSA--------FTQEVA 106
V+ G FGTV++GL W EG + + +A LR A E
Sbjct: 25 VLGSGAFGTVYKGL------------WIPEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 107 VWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRR 166
V +D+P+V + +G + S+ ++ + +P G L Y ++ +
Sbjct: 73 VMASVDNPHVCRLLGICLTST-----------------VQLITQLMPFGCLLDY-VREHK 114
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+ + ++ + +A+G++YL +++VHRD+ N+L+ + VKI DFG+A++ +
Sbjct: 115 DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 174
Query: 227 NDMTGETGT--LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSA 283
+ E G + +MA E + Y + DV+S+G+ +WE+ PY + SE++S
Sbjct: 175 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 234
Query: 284 VVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
+ + P+ P C + +M +CW + D RP+ E++
Sbjct: 235 LEKGERLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 273
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 133/280 (47%), Gaps = 44/280 (15%)
Query: 57 VIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIA--ALRSA--------FTQEVA 106
V+ G FGTV++GL W EG + + +A LR A E
Sbjct: 24 VLGSGAFGTVYKGL------------WIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 107 VWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRR 166
V +D+P+V + +G + S+ ++ + +P G L Y ++ +
Sbjct: 72 VMASVDNPHVCRLLGICLTST-----------------VQLITQLMPFGCLLDY-VREHK 113
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+ + ++ + +A+G++YL +++VHRD+ N+L+ + VKI DFG+A++ +
Sbjct: 114 DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 173
Query: 227 NDMTGETGT--LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSA 283
+ E G + +MA E + Y + DV+S+G+ +WE+ PY + SE++S
Sbjct: 174 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 233
Query: 284 VVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
+ + P+ P C + +M +CW + D RP+ E++
Sbjct: 234 LEKGERLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 272
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 133/280 (47%), Gaps = 44/280 (15%)
Query: 57 VIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIA--ALRSA--------FTQEVA 106
V+ G FGTV++GL W EG + + +A LR A E
Sbjct: 28 VLGSGAFGTVYKGL------------WIPEGEKVKIPVAIKELREATSPKANKEILDEAY 75
Query: 107 VWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRR 166
V +D+P+V + +G + S+ ++ + +P G L Y ++ +
Sbjct: 76 VMASVDNPHVCRLLGICLTST-----------------VQLITQLMPFGCLLDY-VREHK 117
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+ + ++ + +A+G++YL +++VHRD+ N+L+ + VKI DFG+A++ +
Sbjct: 118 DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 177
Query: 227 NDMTGETGT--LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSA 283
+ E G + +MA E + Y + DV+S+G+ +WE+ PY + SE++S
Sbjct: 178 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 237
Query: 284 VVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
+ + P+ P C + +M +CW + D RP+ E++
Sbjct: 238 LEKGERLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 276
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 133/280 (47%), Gaps = 44/280 (15%)
Query: 57 VIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIA--ALRSA--------FTQEVA 106
V+ G FGTV++GL W EG + + +A LR A E
Sbjct: 22 VLGSGAFGTVYKGL------------WIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 107 VWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRR 166
V +D+P+V + +G + S+ ++ + +P G L Y ++ +
Sbjct: 70 VMASVDNPHVCRLLGICLTST-----------------VQLITQLMPFGCLLDY-VREHK 111
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+ + ++ + +A+G++YL +++VHRD+ N+L+ + VKI DFG+A++ +
Sbjct: 112 DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171
Query: 227 NDMTGETGT--LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSA 283
+ E G + +MA E + Y + DV+S+G+ +WE+ PY + SE++S
Sbjct: 172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 231
Query: 284 VVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
+ + P+ P C + +M +CW + D RP+ E++
Sbjct: 232 LEKGERLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 270
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 133/280 (47%), Gaps = 44/280 (15%)
Query: 57 VIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIA--ALRSA--------FTQEVA 106
V+ G FGTV++GL W EG + + +A LR A E
Sbjct: 24 VLGSGAFGTVYKGL------------WIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 107 VWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRR 166
V +D+P+V + +G + S+ ++ + +P G L Y ++ +
Sbjct: 72 VMASVDNPHVCRLLGICLTST-----------------VQLITQLMPFGCLLDY-VREHK 113
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+ + ++ + +A+G++YL +++VHRD+ N+L+ + VKI DFG A++ +
Sbjct: 114 DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE 173
Query: 227 NDMTGETGT--LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSA 283
+ E G + +MA E + Y + DV+S+G+ +WE+ PY + SE++S
Sbjct: 174 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 233
Query: 284 VVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
+ + P+ P C + +M++CW + D RP+ E++
Sbjct: 234 LEKGERLPQ-PPICTIDVYMIMRKCWMIDADSRPKFRELI 272
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 133/280 (47%), Gaps = 44/280 (15%)
Query: 57 VIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAA--LRSA--------FTQEVA 106
V+ G FGTV++GL W EG + + +A LR A E
Sbjct: 56 VLGSGAFGTVYKGL------------WIPEGEKVKIPVAIMELREATSPKANKEILDEAY 103
Query: 107 VWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRR 166
V +D+P+V + +G + S+ ++ + +P G L Y ++ +
Sbjct: 104 VMASVDNPHVCRLLGICLTST-----------------VQLITQLMPFGCLLDY-VREHK 145
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+ + ++ + +A+G++YL +++VHRD+ N+L+ + VKI DFG+A++ +
Sbjct: 146 DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 205
Query: 227 NDMTGETGT--LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSA 283
+ E G + +MA E + Y + DV+S+G+ +WE+ PY + SE++S
Sbjct: 206 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 265
Query: 284 VVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
+ + P+ P C + +M +CW + D RP+ E++
Sbjct: 266 LEKGERLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 304
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 133/280 (47%), Gaps = 44/280 (15%)
Query: 57 VIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAA--LRSA--------FTQEVA 106
V+ G FGTV++GL W EG + + +A LR A E
Sbjct: 16 VLGSGAFGTVYKGL------------WIPEGEKVKIPVAIKELREATSPKANKEILDEAY 63
Query: 107 VWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRR 166
V +D+P+V + +G + S+ ++ + +P G L Y ++ +
Sbjct: 64 VMASVDNPHVCRLLGICLTST-----------------VQLITQLMPFGCLLDY-VREHK 105
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+ + ++ + +A+G++YL +++VHRD+ N+L+ + VKI DFG+A++ +
Sbjct: 106 DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 165
Query: 227 NDMTGETGT--LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSA 283
+ E G + +MA E + Y + DV+S+G+ +WE+ PY + SE++S
Sbjct: 166 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 225
Query: 284 VVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
+ + P+ P C + +M +CW + D RP+ E++
Sbjct: 226 LEKGERLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 264
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 142/313 (45%), Gaps = 49/313 (15%)
Query: 47 IEPSKLVIKSVIARGTFGTVHRGLYD------GHDVAVKLLDWGEEGHRTEAEIAALRSA 100
E L S + +G FG+V YD G VAVK L + +
Sbjct: 7 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRD--------- 57
Query: 101 FTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTY 160
F +E+ + L + K+ G + G ++ +V+EYLP G L+ +
Sbjct: 58 FQREIQILKALHSDFIVKYRGVSYGPGRQSLR--------------LVMEYLPSGCLRDF 103
Query: 161 LIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR 220
L ++R R A ++++ + + +G+ YL S++ VHRD+ N+L++ VKIADFG+A+
Sbjct: 104 LQRHRARLDASRLLL-YSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAK 162
Query: 221 VEASNPNDMT----GETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEI--YCCDMPYPD 274
+ + + G++ Y APE L+ N ++R+ DV+SFG+ L+E+ YC P
Sbjct: 163 LLPLDKDYYVVREPGQSPIFWY-APESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPS 221
Query: 275 LSFSEV------TSAVVRQNL------RPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 322
F + A+ R R P CP+ + +MK CW +P RP +
Sbjct: 222 AEFLRMMGSERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSAL 281
Query: 323 VSMLEAIDTSKGG 335
L+ + + G
Sbjct: 282 GPQLDMLWSGSRG 294
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 142/313 (45%), Gaps = 49/313 (15%)
Query: 47 IEPSKLVIKSVIARGTFGTVHRGLYD------GHDVAVKLLDWGEEGHRTEAEIAALRSA 100
E L S + +G FG+V YD G VAVK L + +
Sbjct: 20 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRD--------- 70
Query: 101 FTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTY 160
F +E+ + L + K+ G + G ++ +V+EYLP G L+ +
Sbjct: 71 FQREIQILKALHSDFIVKYRGVSYGPGRQSLR--------------LVMEYLPSGCLRDF 116
Query: 161 LIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR 220
L ++R R A ++++ + + +G+ YL S++ VHRD+ N+L++ VKIADFG+A+
Sbjct: 117 LQRHRARLDASRLLL-YSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAK 175
Query: 221 VEASNPNDMT----GETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEI--YCCDMPYPD 274
+ + + G++ Y APE L+ N ++R+ DV+SFG+ L+E+ YC P
Sbjct: 176 LLPLDKDYYVVREPGQSPIFWY-APESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPS 234
Query: 275 LSFSEVTS------AVVRQNL------RPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 322
F + A+ R R P CP+ + +MK CW +P RP +
Sbjct: 235 AEFLRMMGCERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSAL 294
Query: 323 VSMLEAIDTSKGG 335
L+ + + G
Sbjct: 295 GPQLDMLWSGSRG 307
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 125/288 (43%), Gaps = 43/288 (14%)
Query: 58 IARGTFGTVHRGLYDGH-------DVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHK 110
+ G FG V+ G G VAVK L E + E+ F E + K
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL---PEVCSEQDELD-----FLMEALIISK 90
Query: 111 LDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRR--- 167
+H N+ + IG ++ S +P I ++E + GG LK++L + R R
Sbjct: 91 FNHQNIVRCIGVSLQS-------------LPRFI---LLELMAGGDLKSFLRETRPRPSQ 134
Query: 168 --KLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLD---KNRTVKIADFGVAR-- 220
LA ++ +A D+A G YL +HRD+ N LL R KI DFG+A+
Sbjct: 135 PSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDI 194
Query: 221 VEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCD-MPYPDLSFSE 279
AS + +M PE + K D +SFG+ LWEI+ MPYP S E
Sbjct: 195 YRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 254
Query: 280 VTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLE 327
V V R + P+ CP + +M +CW P+ RP ++ +E
Sbjct: 255 VLEFVTSGG-RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 128/307 (41%), Gaps = 45/307 (14%)
Query: 43 QDWEIEPSKLVIKSVIARGTFGTVHRGLYDGH-------DVAVKLLDWGEEGHRTEAEIA 95
+ WE + L + G FG V G VAVK+L EA ++
Sbjct: 39 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 98
Query: 96 ALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCV-------- 147
L+ + H H N+ +GA T G V + + CC
Sbjct: 99 ELK-------IMSHLGQHENIVNLLGAC---------THGGPVLVITEYCCYGDLLNFLR 142
Query: 148 ----VVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENM 203
V+E P A+ R ++ + +A+G+++L S+ +HRDV N+
Sbjct: 143 RKSRVLETDPAFAIANSTASTRD-------LLHFSSQVAQGMAFLASKNCIHRDVAARNV 195
Query: 204 LLDKNRTVKIADFGVARVEASNPNDMTGETGTL--GYMAPEVLNGNPYNRKCDVYSFGIC 261
LL KI DFG+AR ++ N + L +MAPE + Y + DV+S+GI
Sbjct: 196 LLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGIL 255
Query: 262 LWEIYCCDM-PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMD 320
LWEI+ + PYP + + +V+ + P P ++ ++M+ CW P RP
Sbjct: 256 LWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQ 315
Query: 321 EVVSMLE 327
++ S L+
Sbjct: 316 QICSFLQ 322
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 132/280 (47%), Gaps = 44/280 (15%)
Query: 57 VIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAA--LRSA--------FTQEVA 106
V+ G FGTV++GL W EG + + +A LR A E
Sbjct: 19 VLGSGAFGTVYKGL------------WIPEGEKVKIPVAIKELREATSPKANKEILDEAY 66
Query: 107 VWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRR 166
V +D+P+V + +G + S+ ++ + +P G L Y ++ +
Sbjct: 67 VMASVDNPHVCRLLGICLTST-----------------VQLITQLMPFGCLLDY-VREHK 108
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+ + ++ + +A G++YL +++VHRD+ N+L+ + VKI DFG+A++ +
Sbjct: 109 DNIGSQYLLNWCVQIAEGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 168
Query: 227 NDMTGETGT--LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSA 283
+ E G + +MA E + Y + DV+S+G+ +WE+ PY + SE++S
Sbjct: 169 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 228
Query: 284 VVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
+ + P+ P C + +M +CW + D RP+ E++
Sbjct: 229 LEKGERLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 267
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 145/304 (47%), Gaps = 40/304 (13%)
Query: 30 PIGKASNFLKKQRQDWEIEPSKLVIKSVIARGTFGTVHRGLY--DGHDV----AVKLLDW 83
P G A N Q Q ++ ++L V+ G FGTV++G++ +G V A+K+L+
Sbjct: 22 PSGTAPN----QAQLRILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILN- 76
Query: 84 GEEGHRTEAEIAALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSN 143
G + E F E + +DHP++ + +G + + IQ
Sbjct: 77 ETTGPKANVE-------FMDEALIMASMDHPHLVRLLGVCLSPT---IQ----------- 115
Query: 144 ICCVVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENM 203
+V + +P G L Y + + + ++++ + +A+G+ YL +++VHRD+ N+
Sbjct: 116 ---LVTQLMPHGCLLEY-VHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNV 171
Query: 204 LLDKNRTVKIADFGVARVEASNPNDMTGETGTL--GYMAPEVLNGNPYNRKCDVYSFGIC 261
L+ VKI DFG+AR+ + + + G + +MA E ++ + + DV+S+G+
Sbjct: 172 LVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVT 231
Query: 262 LWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMD 320
+WE+ PY + E+ + + P+ P C + VM +CW + D RP+
Sbjct: 232 IWELMTFGGKPYDGIPTREIPDLLEKGERLPQ-PPICTIDVYMVMVKCWMIDADSRPKFK 290
Query: 321 EVVS 324
E+ +
Sbjct: 291 ELAA 294
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 137/307 (44%), Gaps = 58/307 (18%)
Query: 44 DWEIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSA--- 100
DW + + + VI G FG V + +K ++G R +A I ++
Sbjct: 23 DW----NDIKFQDVIGEGNFGQVLKA-------RIK-----KDGLRMDAAIKRMKEYASK 66
Query: 101 -----FTQEVAVWHKL-DHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPG 154
F E+ V KL HPN+ +GA L++ +EY P
Sbjct: 67 DDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL----------------AIEYAPH 110
Query: 155 GALKTYLIKNR--------------RRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKT 200
G L +L K+R L+ + ++ A D+ARG+ YL ++ +HRD+
Sbjct: 111 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAA 170
Query: 201 ENMLLDKNRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGI 260
N+L+ +N KIADFG++R + G + +MA E LN + Y DV+S+G+
Sbjct: 171 RNILVGENYVAKIADFGLSRGQEVYVKKTMGRL-PVRWMAIESLNYSVYTTNSDVWSYGV 229
Query: 261 CLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEM 319
LWEI PY ++ +E+ + Q R E P C + ++M++CW P +RP
Sbjct: 230 LLWEIVSLGGTPYCGMTCAELYEKLP-QGYRLEKPLNCDDEVYDLMRQCWREKPYERPSF 288
Query: 320 DEVVSML 326
+++ L
Sbjct: 289 AQILVSL 295
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 137/307 (44%), Gaps = 58/307 (18%)
Query: 44 DWEIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSA--- 100
DW + + + VI G FG V + +K ++G R +A I ++
Sbjct: 13 DW----NDIKFQDVIGEGNFGQVLKA-------RIK-----KDGLRMDAAIKRMKEYASK 56
Query: 101 -----FTQEVAVWHKL-DHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPG 154
F E+ V KL HPN+ +GA L++ +EY P
Sbjct: 57 DDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL----------------AIEYAPH 100
Query: 155 GALKTYLIKNR--------------RRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKT 200
G L +L K+R L+ + ++ A D+ARG+ YL ++ +HRD+
Sbjct: 101 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAA 160
Query: 201 ENMLLDKNRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGI 260
N+L+ +N KIADFG++R + G + +MA E LN + Y DV+S+G+
Sbjct: 161 RNILVGENYVAKIADFGLSRGQEVYVKKTMGRL-PVRWMAIESLNYSVYTTNSDVWSYGV 219
Query: 261 CLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEM 319
LWEI PY ++ +E+ + Q R E P C + ++M++CW P +RP
Sbjct: 220 LLWEIVSLGGTPYCGMTCAELYEK-LPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSF 278
Query: 320 DEVVSML 326
+++ L
Sbjct: 279 AQILVSL 285
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 133/280 (47%), Gaps = 44/280 (15%)
Query: 57 VIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIA--ALRSA--------FTQEVA 106
V+ G FGTV++GL W EG + + +A LR A E
Sbjct: 24 VLGSGAFGTVYKGL------------WIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 107 VWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRR 166
V +D+P+V + +G + S+ ++++ +P G L Y ++ +
Sbjct: 72 VMASVDNPHVCRLLGICLTST-----------------VQLIMQLMPFGCLLDY-VREHK 113
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+ + ++ + +A+G++YL +++VHRD+ N+L+ + VKI DFG A++ +
Sbjct: 114 DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE 173
Query: 227 NDMTGETGT--LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSA 283
+ E G + +MA E + Y + DV+S+G+ +WE+ PY + SE++S
Sbjct: 174 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 233
Query: 284 VVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
+ + P+ P C + +M +CW + D RP+ E++
Sbjct: 234 LEKGERLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 272
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 133/280 (47%), Gaps = 44/280 (15%)
Query: 57 VIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIA--ALRSA--------FTQEVA 106
V+ G FGTV++GL W EG + + +A LR A E
Sbjct: 26 VLGSGAFGTVYKGL------------WIPEGEKVKIPVAIKELREATSPKANKEILDEAY 73
Query: 107 VWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRR 166
V +D+P+V + +G + S+ ++++ +P G L Y ++ +
Sbjct: 74 VMASVDNPHVCRLLGICLTST-----------------VQLIMQLMPFGCLLDY-VREHK 115
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+ + ++ + +A+G++YL +++VHRD+ N+L+ + VKI DFG A++ +
Sbjct: 116 DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE 175
Query: 227 NDMTGETGT--LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSA 283
+ E G + +MA E + Y + DV+S+G+ +WE+ PY + SE++S
Sbjct: 176 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 235
Query: 284 VVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
+ + P+ P C + +M +CW + D RP+ E++
Sbjct: 236 LEKGERLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 274
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 133/273 (48%), Gaps = 44/273 (16%)
Query: 57 VIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPNV 116
V+ +GT+G V+ G + V + + + E R +E+A+ L H N+
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSR-------YSQPLHEEIALHKHLKHKNI 81
Query: 117 TKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYL------IKNRRRKLA 170
+++G+ +ENG + + +E +PGG+L L +K+ + +
Sbjct: 82 VQYLGSF---------SENGFIK-------IFMEQVPGGSLSALLRSKWGPLKDNEQTIG 125
Query: 171 FKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTV-KIADFGVA-RVEASNPND 228
F + GL YLH +IVHRD+K +N+L++ V KI+DFG + R+ NP
Sbjct: 126 F-----YTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCT 180
Query: 229 MTGETGTLGYMAPEVLNGNP--YNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVR 286
T TGTL YMAPE+++ P Y + D++S G + E+ P+ +L E +A+ +
Sbjct: 181 ETF-TGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYEL--GEPQAAMFK 237
Query: 287 QNL---RPEIPRCCPSSLANVMKRCWDANPDKR 316
+ PEIP + + +C++ +PDKR
Sbjct: 238 VGMFKVHPEIPESMSAEAKAFILKCFEPDPDKR 270
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 134/285 (47%), Gaps = 33/285 (11%)
Query: 43 QDWEIEPSKLVIK-SVIARGTFGTVHRGLYDGHD---VAVKLLDWGEEGHRTEAEIAALR 98
Q ++P +L K I +G+FG V++G+ D H VA+K++D E
Sbjct: 11 QHSRVDPEELFTKLDRIGKGSFGEVYKGI-DNHTKEVVAIKIIDL--------EEAEDEI 61
Query: 99 SAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALK 158
QE+ V + D P +T++ G+ + S++L +++EYL GG+
Sbjct: 62 EDIQQEITVLSQCDSPYITRYFGSYLKSTKL----------------WIIMEYLGGGSAL 105
Query: 159 TYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGV 218
L + L + + ++ +GL YLHS++ +HRD+K N+LL + VK+ADFGV
Sbjct: 106 DLL---KPGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGV 162
Query: 219 ARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFS 278
A GT +MAPEV+ + Y+ K D++S GI E+ + P DL
Sbjct: 163 AGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPM 222
Query: 279 EVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
V ++ +N P + ++ C + +P RP E++
Sbjct: 223 RVL-FLIPKNSPPTLEGQHSKPFKEFVEACLNKDPRFRPTAKELL 266
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 148/305 (48%), Gaps = 48/305 (15%)
Query: 43 QDWEIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFT 102
Q+W+I +L I +I +G FG V+ G + G +VA++L+D E + AF
Sbjct: 26 QEWDIPFEQLEIGELIGKGRFGQVYHGRWHG-EVAIRLID-------IERDNEDQLKAFK 77
Query: 103 QEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLI 162
+EV + + H NV F+GA M L A+ +++C Y K L
Sbjct: 78 REVMAYRQTRHENVVLFMGACMSPPHL---------AIITSLCKGRTLYSVVRDAKIVLD 128
Query: 163 KNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVE 222
N+ R Q+A ++ +G+ YLH++ I+H+D+K++N+ D + V I DFG+ +
Sbjct: 129 VNKTR--------QIAQEIVKGMGYLHAKGILHKDLKSKNVFYDNGKVV-ITDFGLFSIS 179
Query: 223 -----ASNPNDMTGETGTLGYMAPEVL---------NGNPYNRKCDVYSFGICLWEIYCC 268
+ + + G L ++APE++ + P+++ DV++ G +E++
Sbjct: 180 GVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAR 239
Query: 269 DMPYPDLSFSEVTSAVVRQ---NLRPEIPRC-CPSSLANVMKRCWDANPDKRPEMDEVVS 324
+ P+ ++ A++ Q ++P + + +++++ CW ++RP +++
Sbjct: 240 EWPFK----TQPAEAIIWQMGTGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMD 295
Query: 325 MLEAI 329
MLE +
Sbjct: 296 MLEKL 300
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 132/280 (47%), Gaps = 44/280 (15%)
Query: 57 VIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIA--ALRSA--------FTQEVA 106
V+ G FGTV++GL W EG + + +A LR A E
Sbjct: 29 VLGSGAFGTVYKGL------------WIPEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 107 VWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRR 166
V +D+P+V + +G + S+ ++ + +P G L Y ++ +
Sbjct: 77 VMASVDNPHVCRLLGICLTST-----------------VQLITQLMPFGCLLDY-VREHK 118
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+ + ++ + +A+G++YL +++VHRD+ N+L+ + VKI DFG A++ +
Sbjct: 119 DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE 178
Query: 227 NDMTGETGT--LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSA 283
+ E G + +MA E + Y + DV+S+G+ +WE+ PY + SE++S
Sbjct: 179 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 238
Query: 284 VVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
+ + P+ P C + +M +CW + D RP+ E++
Sbjct: 239 LEKGERLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 277
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 134/275 (48%), Gaps = 44/275 (16%)
Query: 55 KSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHP 114
+ V+ +GT+G V+ G + V + + + E R +E+A+ L H
Sbjct: 13 RVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSR-------YSQPLHEEIALHKHLKHK 65
Query: 115 NVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYL------IKNRRRK 168
N+ +++G+ +ENG + + +E +PGG+L L +K+ +
Sbjct: 66 NIVQYLGSF---------SENGFIK-------IFMEQVPGGSLSALLRSKWGPLKDNEQT 109
Query: 169 LAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTV-KIADFGVA-RVEASNP 226
+ F + GL YLH +IVHRD+K +N+L++ V KI+DFG + R+ NP
Sbjct: 110 IGF-----YTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP 164
Query: 227 NDMTGETGTLGYMAPEVLNGNP--YNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAV 284
T TGTL YMAPE+++ P Y + D++S G + E+ P+ +L E +A+
Sbjct: 165 CTETF-TGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYEL--GEPQAAM 221
Query: 285 VRQNL---RPEIPRCCPSSLANVMKRCWDANPDKR 316
+ + PEIP + + +C++ +PDKR
Sbjct: 222 FKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKR 256
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 121/272 (44%), Gaps = 39/272 (14%)
Query: 58 IARGTFGTVHRGLYDGHD-----VAVKLLDWGEEGHRTEAEIAALRSA---FTQEVAVWH 109
+ G+FG V RG +D VAVK L + ++ + A F +EV H
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCL---------KPDVLSQPEAMDDFIREVNAMH 76
Query: 110 KLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKL 169
LDH N+ + G + + +V E P G+L L K++ L
Sbjct: 77 SLDHRNLIRLYGVVL-----------------TPPMKMVTELAPLGSLLDRLRKHQGHFL 119
Query: 170 AFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDM 229
+ + A+ +A G+ YL S++ +HRD+ N+LL VKI DFG+ R N +
Sbjct: 120 -LGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHX 178
Query: 230 TGETG---TLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDM-PYPDLSFSEVTSAVV 285
+ + APE L ++ D + FG+ LWE++ P+ L+ S++ +
Sbjct: 179 VMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKID 238
Query: 286 RQNLRPEIPRCCPSSLANVMKRCWDANPDKRP 317
++ R P CP + NVM +CW P+ RP
Sbjct: 239 KEGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 270
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 132/280 (47%), Gaps = 44/280 (15%)
Query: 57 VIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIA--ALRSA--------FTQEVA 106
V+ G FGTV++GL W EG + + +A LR A E
Sbjct: 22 VLGSGAFGTVYKGL------------WIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 107 VWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRR 166
V +D+P+V + +G + S+ ++ + +P G L Y ++ +
Sbjct: 70 VMASVDNPHVCRLLGICLTST-----------------VQLITQLMPFGCLLDY-VREHK 111
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+ + ++ + +A+G++YL +++VHRD+ N+L+ + VKI DFG A++ +
Sbjct: 112 DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE 171
Query: 227 NDMTGETGT--LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSA 283
+ E G + +MA E + Y + DV+S+G+ +WE+ PY + SE++S
Sbjct: 172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 231
Query: 284 VVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
+ + P+ P C + +M +CW + D RP+ E++
Sbjct: 232 LEKGERLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 270
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 121/272 (44%), Gaps = 39/272 (14%)
Query: 58 IARGTFGTVHRGLYDGHD-----VAVKLLDWGEEGHRTEAEIAALRSA---FTQEVAVWH 109
+ G+FG V RG +D VAVK L + ++ + A F +EV H
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCL---------KPDVLSQPEAMDDFIREVNAMH 76
Query: 110 KLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKL 169
LDH N+ + G + + +V E P G+L L K++ L
Sbjct: 77 SLDHRNLIRLYGVVL-----------------TPPMKMVTELAPLGSLLDRLRKHQGHFL 119
Query: 170 AFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDM 229
+ + A+ +A G+ YL S++ +HRD+ N+LL VKI DFG+ R N +
Sbjct: 120 -LGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHY 178
Query: 230 TGETG---TLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDM-PYPDLSFSEVTSAVV 285
+ + APE L ++ D + FG+ LWE++ P+ L+ S++ +
Sbjct: 179 VMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKID 238
Query: 286 RQNLRPEIPRCCPSSLANVMKRCWDANPDKRP 317
++ R P CP + NVM +CW P+ RP
Sbjct: 239 KEGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 270
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 120/272 (44%), Gaps = 39/272 (14%)
Query: 58 IARGTFGTVHRGLYDGHD-----VAVKLLDWGEEGHRTEAEIAALRSA---FTQEVAVWH 109
+ G+FG V RG +D VAVK L + ++ + A F +EV H
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCL---------KPDVLSQPEAMDDFIREVNAMH 70
Query: 110 KLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKL 169
LDH N+ + G + +V E P G+L L K++ L
Sbjct: 71 SLDHRNLIRLYGVVLTPP-----------------MKMVTELAPLGSLLDRLRKHQGHFL 113
Query: 170 AFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDM 229
+ + A+ +A G+ YL S++ +HRD+ N+LL VKI DFG+ R N +
Sbjct: 114 -LGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHY 172
Query: 230 TGETGT---LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDM-PYPDLSFSEVTSAVV 285
+ + APE L ++ D + FG+ LWE++ P+ L+ S++ +
Sbjct: 173 VMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKID 232
Query: 286 RQNLRPEIPRCCPSSLANVMKRCWDANPDKRP 317
++ R P CP + NVM +CW P+ RP
Sbjct: 233 KEGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 264
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 134/277 (48%), Gaps = 36/277 (12%)
Query: 57 VIARGTFGTVHRGLY--DGHDV----AVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHK 110
V+ G FGTV++G++ +G V A+K+L+ G + E F E +
Sbjct: 22 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILN-ETTGPKANVE-------FMDEALIMAS 73
Query: 111 LDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLA 170
+DHP++ + +G + + IQ +V + +P G L Y + + +
Sbjct: 74 MDHPHLVRLLGVCLSPT---IQ--------------LVTQLMPHGCLLEY-VHEHKDNIG 115
Query: 171 FKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMT 230
++++ + +A+G+ YL +++VHRD+ N+L+ VKI DFG+AR+ + +
Sbjct: 116 SQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYN 175
Query: 231 GETGTL--GYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFSEVTSAVVRQ 287
+ G + +MA E ++ + + DV+S+G+ +WE+ PY + E+ + +
Sbjct: 176 ADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKG 235
Query: 288 NLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVS 324
P+ P C + VM +CW + D RP+ E+ +
Sbjct: 236 ERLPQ-PPICTIDVYMVMVKCWMIDADSRPKFKELAA 271
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 134/284 (47%), Gaps = 31/284 (10%)
Query: 43 QDWEIEPSKLVIK-SVIARGTFGTVHRGLYDGHD--VAVKLLDWGEEGHRTEAEIAALRS 99
Q+ + +P +L K I +G+FG V +G+ + VA+K++D E
Sbjct: 14 QNLKADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDL--------EEAEDEIE 65
Query: 100 AFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKT 159
QE+ V + D P VTK+ G+ + ++L +++EYL GG+
Sbjct: 66 DIQQEITVLSQCDSPYVTKYYGSYLKDTKL----------------WIIMEYLGGGSALD 109
Query: 160 YLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVA 219
L + +++ ++ +GL YLHS+K +HRD+K N+LL ++ VK+ADFGVA
Sbjct: 110 LLEPGPLDETQIATILR---EILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVA 166
Query: 220 RVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSE 279
GT +MAPEV+ + Y+ K D++S GI E+ + P+ +L +
Sbjct: 167 GQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMK 226
Query: 280 VTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
V + + N P + L ++ C + P RP E++
Sbjct: 227 VLFLIPKNN-PPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELL 269
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 120/272 (44%), Gaps = 39/272 (14%)
Query: 58 IARGTFGTVHRGLYDGHD-----VAVKLLDWGEEGHRTEAEIAALRSA---FTQEVAVWH 109
+ G+FG V RG +D VAVK L + ++ + A F +EV H
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCL---------KPDVLSQPEAMDDFIREVNAMH 66
Query: 110 KLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKL 169
LDH N+ + G + +V E P G+L L K++ L
Sbjct: 67 SLDHRNLIRLYGVVLTPP-----------------MKMVTELAPLGSLLDRLRKHQGHFL 109
Query: 170 AFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDM 229
+ + A+ +A G+ YL S++ +HRD+ N+LL VKI DFG+ R N +
Sbjct: 110 -LGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHX 168
Query: 230 TGETG---TLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDM-PYPDLSFSEVTSAVV 285
+ + APE L ++ D + FG+ LWE++ P+ L+ S++ +
Sbjct: 169 VMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKID 228
Query: 286 RQNLRPEIPRCCPSSLANVMKRCWDANPDKRP 317
++ R P CP + NVM +CW P+ RP
Sbjct: 229 KEGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 260
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 121/272 (44%), Gaps = 39/272 (14%)
Query: 58 IARGTFGTVHRGLYDGHD-----VAVKLLDWGEEGHRTEAEIAALRSA---FTQEVAVWH 109
+ G+FG V RG +D VAVK L + ++ + A F +EV H
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCL---------KPDVLSQPEAMDDFIREVNAMH 70
Query: 110 KLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKL 169
LDH N+ + G + + +V E P G+L L K++ L
Sbjct: 71 SLDHRNLIRLYGVVL-----------------TPPMKMVTELAPLGSLLDRLRKHQGHFL 113
Query: 170 AFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDM 229
+ + A+ +A G+ YL S++ +HRD+ N+LL VKI DFG+ R N +
Sbjct: 114 -LGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHY 172
Query: 230 TGETGT---LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDM-PYPDLSFSEVTSAVV 285
+ + APE L ++ D + FG+ LWE++ P+ L+ S++ +
Sbjct: 173 VMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKID 232
Query: 286 RQNLRPEIPRCCPSSLANVMKRCWDANPDKRP 317
++ R P CP + NVM +CW P+ RP
Sbjct: 233 KEGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 264
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 120/272 (44%), Gaps = 39/272 (14%)
Query: 58 IARGTFGTVHRGLYDGHD-----VAVKLLDWGEEGHRTEAEIAALRSA---FTQEVAVWH 109
+ G+FG V RG +D VAVK L + ++ + A F +EV H
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCL---------KPDVLSQPEAMDDFIREVNAMH 66
Query: 110 KLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKL 169
LDH N+ + G + +V E P G+L L K++ L
Sbjct: 67 SLDHRNLIRLYGVVLTPP-----------------MKMVTELAPLGSLLDRLRKHQGHFL 109
Query: 170 AFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDM 229
+ + A+ +A G+ YL S++ +HRD+ N+LL VKI DFG+ R N +
Sbjct: 110 -LGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHY 168
Query: 230 TGETG---TLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDM-PYPDLSFSEVTSAVV 285
+ + APE L ++ D + FG+ LWE++ P+ L+ S++ +
Sbjct: 169 VMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKID 228
Query: 286 RQNLRPEIPRCCPSSLANVMKRCWDANPDKRP 317
++ R P CP + NVM +CW P+ RP
Sbjct: 229 KEGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 260
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 120/272 (44%), Gaps = 39/272 (14%)
Query: 58 IARGTFGTVHRGLYDGHD-----VAVKLLDWGEEGHRTEAEIAALRSA---FTQEVAVWH 109
+ G+FG V RG +D VAVK L + ++ + A F +EV H
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCL---------KPDVLSQPEAMDDFIREVNAMH 66
Query: 110 KLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKL 169
LDH N+ + G + +V E P G+L L K++ L
Sbjct: 67 SLDHRNLIRLYGVVLTPP-----------------MKMVTELAPLGSLLDRLRKHQGHFL 109
Query: 170 AFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDM 229
+ + A+ +A G+ YL S++ +HRD+ N+LL VKI DFG+ R N +
Sbjct: 110 -LGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHY 168
Query: 230 TGETGT---LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDM-PYPDLSFSEVTSAVV 285
+ + APE L ++ D + FG+ LWE++ P+ L+ S++ +
Sbjct: 169 VMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKID 228
Query: 286 RQNLRPEIPRCCPSSLANVMKRCWDANPDKRP 317
++ R P CP + NVM +CW P+ RP
Sbjct: 229 KEGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 260
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 134/302 (44%), Gaps = 57/302 (18%)
Query: 58 IARGTFGTVHRGLYDG-------HDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHK 110
I G FG V + G VAVK+L E A +++ F +E A+ +
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLK--------EEASADMQADFQREAALMAE 106
Query: 111 LDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYL--------- 161
D+PN+ K +G + C++ EY+ G L +L
Sbjct: 107 FDNPNIVKLLGVCAVGKPM----------------CLLFEYMAYGDLNEFLRSMSPHTVC 150
Query: 162 ------IKNRRR-------KLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKN 208
+ R R L+ + +A +A G++YL +K VHRD+ T N L+ +N
Sbjct: 151 SLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGEN 210
Query: 209 RTVKIADFGVAR-VEASNPNDMTGETGT-LGYMAPEVLNGNPYNRKCDVYSFGICLWEIY 266
VKIADFG++R + +++ G + +M PE + N Y + DV+++G+ LWEI+
Sbjct: 211 MVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIF 270
Query: 267 CCDM-PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSM 325
+ PY ++ EV V N+ P CP L N+M+ CW P RP + +
Sbjct: 271 SYGLQPYYGMAHEEVIYYVRDGNIL-ACPENCPLELYNLMRLCWSKLPADRPSFCSIHRI 329
Query: 326 LE 327
L+
Sbjct: 330 LQ 331
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 137/307 (44%), Gaps = 58/307 (18%)
Query: 44 DWEIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSA--- 100
DW + + + VI G FG V + +K ++G R +A I ++
Sbjct: 20 DW----NDIKFQDVIGEGNFGQVLKA-------RIK-----KDGLRMDAAIKRMKEYASK 63
Query: 101 -----FTQEVAVWHKL-DHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPG 154
F E+ V KL HPN+ +GA L++ +EY P
Sbjct: 64 DDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL----------------AIEYAPH 107
Query: 155 GALKTYLIKNR--------------RRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKT 200
G L +L K+R L+ + ++ A D+ARG+ YL ++ +HR++
Sbjct: 108 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRNLAA 167
Query: 201 ENMLLDKNRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGI 260
N+L+ +N KIADFG++R + G + +MA E LN + Y DV+S+G+
Sbjct: 168 RNILVGENYVAKIADFGLSRGQEVYVKKTMGRL-PVRWMAIESLNYSVYTTNSDVWSYGV 226
Query: 261 CLWEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEM 319
LWEI PY ++ +E+ + Q R E P C + ++M++CW P +RP
Sbjct: 227 LLWEIVSLGGTPYCGMTCAELYEKLP-QGYRLEKPLNCDDEVYDLMRQCWREKPYERPSF 285
Query: 320 DEVVSML 326
+++ L
Sbjct: 286 AQILVSL 292
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 132/280 (47%), Gaps = 31/280 (11%)
Query: 47 IEPSKLVIK-SVIARGTFGTVHRGLYDGHD--VAVKLLDWGEEGHRTEAEIAALRSAFTQ 103
++P +L K I +G+FG V +G+ + VA+K++D E Q
Sbjct: 3 LDPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDL--------EEAEDEIEDIQQ 54
Query: 104 EVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIK 163
E+ V + D P VTK+ G+ + ++L +++EYL GG+ L
Sbjct: 55 EITVLSQCDSPYVTKYYGSYLKDTKL----------------WIIMEYLGGGSALDLLEP 98
Query: 164 NRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEA 223
+ +++ ++ +GL YLHS+K +HRD+K N+LL ++ VK+ADFGVA
Sbjct: 99 GPLDETQIATILR---EILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT 155
Query: 224 SNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA 283
GT +MAPEV+ + Y+ K D++S GI E+ + P+ +L +V
Sbjct: 156 DTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFL 215
Query: 284 VVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
+ + N P + L ++ C + P RP E++
Sbjct: 216 IPKNN-PPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELL 254
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 132/280 (47%), Gaps = 31/280 (11%)
Query: 47 IEPSKLVIK-SVIARGTFGTVHRGLYDGHD--VAVKLLDWGEEGHRTEAEIAALRSAFTQ 103
++P +L K I +G+FG V +G+ + VA+K++D E Q
Sbjct: 23 MDPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDL--------EEAEDEIEDIQQ 74
Query: 104 EVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIK 163
E+ V + D P VTK+ G+ + ++L I ++EYL GG+ L
Sbjct: 75 EITVLSQCDSPYVTKYYGSYLKDTKLWI----------------IMEYLGGGSALDLLEP 118
Query: 164 NRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEA 223
+ +++ ++ +GL YLHS+K +HRD+K N+LL ++ VK+ADFGVA
Sbjct: 119 GPLDETQIATILR---EILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT 175
Query: 224 SNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA 283
GT +MAPEV+ + Y+ K D++S GI E+ + P+ +L +V
Sbjct: 176 DTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFL 235
Query: 284 VVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
+ + N P + L ++ C + P RP E++
Sbjct: 236 IPKNN-PPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELL 274
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 132/280 (47%), Gaps = 31/280 (11%)
Query: 47 IEPSKLVIK-SVIARGTFGTVHRGLYDGHD--VAVKLLDWGEEGHRTEAEIAALRSAFTQ 103
++P +L K I +G+FG V +G+ + VA+K++D E Q
Sbjct: 3 LDPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDL--------EEAEDEIEDIQQ 54
Query: 104 EVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIK 163
E+ V + D P VTK+ G+ + ++L +++EYL GG+ L
Sbjct: 55 EITVLSQCDSPYVTKYYGSYLKDTKL----------------WIIMEYLGGGSALDLLEP 98
Query: 164 NRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEA 223
+ +++ ++ +GL YLHS+K +HRD+K N+LL ++ VK+ADFGVA
Sbjct: 99 GPLDETQIATILR---EILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT 155
Query: 224 SNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA 283
GT +MAPEV+ + Y+ K D++S GI E+ + P+ +L +V
Sbjct: 156 DTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFL 215
Query: 284 VVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
+ + N P + L ++ C + P RP E++
Sbjct: 216 IPKNN-PPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELL 254
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 138/291 (47%), Gaps = 38/291 (13%)
Query: 39 KKQRQDWEIEPSKLVIKSVIARGTFGTVHRGLYD--GHDVAVKLLDWGEEGHRTEAEIAA 96
+KQ+ D ++ ++ + GTFG V G ++ GH VAVK+L+ R +
Sbjct: 5 EKQKHDGRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILN------RQKIRSLD 58
Query: 97 LRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGA 156
+ +E+ HP++ K ++ PS+I +V+EY+ GG
Sbjct: 59 VVGKIRREIQNLKLFRHPHIIKLYQV---------------ISTPSDIF-MVMEYVSGGE 102
Query: 157 LKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADF 216
L Y+ KN R L K +L + G+ Y H +VHRD+K EN+LLD + KIADF
Sbjct: 103 LFDYICKNGR--LDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADF 160
Query: 217 GVARVEASNPNDMTGETGTLGYMAPEVLNGNPY-NRKCDVYSFGICLWEIYCCDMPYPD- 274
G++ + S+ + G+ Y APEV++G Y + D++S G+ L+ + C +P+ D
Sbjct: 161 GLSNM-MSDGEFLRXSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDD 219
Query: 275 ---LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 322
F ++ + P+ S+ +++K +P KR + ++
Sbjct: 220 HVPTLFKKICDGIFY------TPQYLNPSVISLLKHMLQVDPMKRATIKDI 264
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 131/315 (41%), Gaps = 58/315 (18%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYDGHD-------VAVKLLDWGEEGHRTEAEIAAL 97
WE L V+ G FG V G VAVK+L E+ +E
Sbjct: 40 WEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLK--EKADSSE------ 91
Query: 98 RSAFTQEVAVWHKL-DHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGA 156
R A E+ + +L H N+ +GA T +G + + CC G
Sbjct: 92 REALMSELKMMTQLGSHENIVNLLGAC---------TLSGPIYLIFEYCCY-------GD 135
Query: 157 LKTYLIKNRRRK----------------------LAFKVVVQLALDLARGLSYLHSQKIV 194
L YL +++R K L F+ ++ A +A+G+ +L + V
Sbjct: 136 LLNYL-RSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCV 194
Query: 195 HRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETGTL--GYMAPEVLNGNPYNRK 252
HRD+ N+L+ + VKI DFG+AR S+ N + L +MAPE L Y K
Sbjct: 195 HRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIK 254
Query: 253 CDVYSFGICLWEIYCCDM-PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDA 311
DV+S+GI LWEI+ + PYP + +++ + + P + +M+ CW
Sbjct: 255 SDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAF 314
Query: 312 NPDKRPEMDEVVSML 326
+ KRP + S L
Sbjct: 315 DSRKRPSFPNLTSFL 329
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 133/295 (45%), Gaps = 35/295 (11%)
Query: 32 GKASNFLKKQRQDWEIEPSKLVIKSVIARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHR 89
K N K+RQ W +E I + +G FG V+ R +A+K+L +
Sbjct: 19 SKQKNEESKKRQ-WALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FK 69
Query: 90 TEAEIAALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVV 149
+ E A + +EV + L HPN+ + G ++ +++ ++
Sbjct: 70 AQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL----------------IL 113
Query: 150 EYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNR 209
EY P G + Y + K + +LA LSY HS++++HRD+K EN+LL
Sbjct: 114 EYAPLGTV--YRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG 171
Query: 210 TVKIADFGVA-RVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC 268
+KIADFG + +S +D+ GTL Y+ PE++ G ++ K D++S G+ +E
Sbjct: 172 ELKIADFGWSVHAPSSRRDDL---CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 228
Query: 269 DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
P+ ++ E + R P +++ R NP +RP + EV+
Sbjct: 229 KPPFEANTYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVL 281
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 133/294 (45%), Gaps = 33/294 (11%)
Query: 32 GKASNFLKKQRQDWEIEPSKLVIKSVIARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHR 89
K N K+RQ W +E I + +G FG V+ R +A+K+L +
Sbjct: 19 SKQKNEESKKRQ-WALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FK 69
Query: 90 TEAEIAALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVV 149
+ E A + +EV + L HPN+ + G ++ +++ ++
Sbjct: 70 AQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL----------------IL 113
Query: 150 EYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNR 209
EY P G + Y + K + +LA LSY HS++++HRD+K EN+LL
Sbjct: 114 EYAPLGTV--YRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG 171
Query: 210 TVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCD 269
+KIADFG + V A + + T GTL Y+ PE++ G ++ K D++S G+ +E
Sbjct: 172 ELKIADFGWS-VHAPS-SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
Query: 270 MPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
P+ ++ E + R P +++ R NP +RP + EV+
Sbjct: 230 PPFEANTYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVL 281
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 131/289 (45%), Gaps = 31/289 (10%)
Query: 48 EPSKLVIK-SVIARGTFGTVHRGLYD--GHDVAVKLLDWGEEGHRTEAEIAALRSAFTQE 104
+P +L K I +G+FG V +G+ + VA+K++D E QE
Sbjct: 20 DPEELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDL--------EEAEDEIEDIQQE 71
Query: 105 VAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKN 164
+ V + D VTK+ G+ + S+L I ++EYL GG+ L
Sbjct: 72 ITVLSQCDSSYVTKYYGSYLKGSKLWI----------------IMEYLGGGSALDLLRAG 115
Query: 165 RRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEAS 224
+ F++ L ++ +GL YLHS+K +HRD+K N+LL + VK+ADFGVA
Sbjct: 116 PFDE--FQIATMLK-EILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTD 172
Query: 225 NPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAV 284
GT +MAPEV+ + Y+ K D++S GI E+ + P D+ V +
Sbjct: 173 TQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLI 232
Query: 285 VRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTSK 333
+ N P + S + C + +P RP E++ + SK
Sbjct: 233 PKNN-PPTLVGDFTKSFKEFIDACLNKDPSFRPTAKELLKHKFIVKNSK 280
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 133/287 (46%), Gaps = 39/287 (13%)
Query: 57 VIARGTFGTVHRGLY--DGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHP 114
+I G FG V + + DG ++ + + E + E E+ AL KLDH
Sbjct: 19 LIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNE--KAEREVKAL-----------AKLDHV 65
Query: 115 NVTKFIGATMG------SSELHIQT-----ENGQVAMPSNICCVVV--EYLPGGALKTYL 161
N+ + G G +S+ +++ EN + + S C+ + E+ G L+ ++
Sbjct: 66 NIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWI 125
Query: 162 IKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARV 221
K R KL + ++L + +G+ Y+HS+K++HRD+K N+ L + VKI DFG+
Sbjct: 126 EKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLV-T 184
Query: 222 EASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWE-IYCCDMPYPDLS-FSE 279
N T GTL YM+PE ++ Y ++ D+Y+ G+ L E ++ CD + F++
Sbjct: 185 SLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTD 244
Query: 280 VTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSML 326
+ + I ++++ P+ RP E++ L
Sbjct: 245 LRDGI--------ISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTL 283
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 132/294 (44%), Gaps = 33/294 (11%)
Query: 32 GKASNFLKKQRQDWEIEPSKLVIKSVIARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHR 89
K N K+RQ W +E I + +G FG V+ R +A+K+L +
Sbjct: 10 SKQKNEESKKRQ-WALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FK 60
Query: 90 TEAEIAALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVV 149
+ E A + +EV + L HPN+ + G ++ +++ ++
Sbjct: 61 AQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL----------------IL 104
Query: 150 EYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNR 209
EY P G + Y + K + +LA LSY HS++++HRD+K EN+LL
Sbjct: 105 EYAPLGTV--YRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG 162
Query: 210 TVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCD 269
+KIADFG + V A + T GTL Y+ PE++ G ++ K D++S G+ +E
Sbjct: 163 ELKIADFGWS-VHAPSSRRTTL-CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 220
Query: 270 MPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
P+ ++ E + R P +++ R NP +RP + EV+
Sbjct: 221 PPFEANTYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVL 272
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 121/272 (44%), Gaps = 37/272 (13%)
Query: 64 GTVHRGLYDGHDVAVKLL---DWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPNVTKFI 120
G + +G + G+D+ VK+L DW R F +E HPNV +
Sbjct: 24 GELWKGRWQGNDIVVKVLKVRDWSTRKSRD----------FNEECPRLRIFSHPNVLPVL 73
Query: 121 GATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALD 180
GA H ++ + P G+L L + + V+ ALD
Sbjct: 74 GACQSPPAPH--------------PTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALD 119
Query: 181 LARGLSYLHSQK--IVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETGTLGY 238
ARG ++LH+ + I + + ++ +D++ T +I+ V + +P G +
Sbjct: 120 XARGXAFLHTLEPLIPRHALNSRSVXIDEDXTARISXADV-KFSFQSP----GRXYAPAW 174
Query: 239 MAPEVLNGNPYN---RKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPR 295
+APE L P + R D +SF + LWE+ ++P+ DLS E+ V + LRP IP
Sbjct: 175 VAPEALQKKPEDTNRRSADXWSFAVLLWELVTREVPFADLSNXEIGXKVALEGLRPTIPP 234
Query: 296 CCPSSLANVMKRCWDANPDKRPEMDEVVSMLE 327
++ + K C + +P KRP+ D +V +LE
Sbjct: 235 GISPHVSKLXKICXNEDPAKRPKFDXIVPILE 266
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 135/278 (48%), Gaps = 41/278 (14%)
Query: 54 IKSVIARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKL 111
++ I +G F V R + G +VAVK++D +T+ +L+ F +EV + L
Sbjct: 19 LQKTIGKGNFAKVKLARHVLTGREVAVKIID------KTQLNPTSLQKLF-REVRIMKIL 71
Query: 112 DHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLI-----KNRR 166
+HPN+ K I+TE +V+EY GG + YL+ K +
Sbjct: 72 NHPNIVKLFEV--------IETEK--------TLYLVMEYASGGEVFDYLVAHGRMKEKE 115
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+ F+ +V + Y H + IVHRD+K EN+LLD + +KIADFG + E +
Sbjct: 116 ARAKFRQIVS-------AVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSN-EFTVG 167
Query: 227 NDMTGETGTLGYMAPEVLNGNPYNR-KCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVV 285
N + G+ Y APE+ G Y+ + DV+S G+ L+ + +P+ + E+ V+
Sbjct: 168 NKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVL 227
Query: 286 RQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
R R IP + N++K+ NP KR +++++
Sbjct: 228 RGKYR--IPFYMSTDCENLLKKLLVLNPIKRGSLEQIM 263
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 131/289 (45%), Gaps = 35/289 (12%)
Query: 38 LKKQRQDWEIEPSKLVIKSVIARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIA 95
+ K+RQ W +E I + +G FG V+ R +A+K+L + + E A
Sbjct: 4 MSKKRQ-WALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKA 54
Query: 96 ALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGG 155
+ +EV + L HPN+ + G ++ +++ ++EY P G
Sbjct: 55 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL----------------ILEYAPLG 98
Query: 156 ALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIAD 215
+ Y + K + +LA LSY HS++++HRD+K EN+LL +KIAD
Sbjct: 99 TV--YRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 156
Query: 216 FGVA-RVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPD 274
FG + +S D+ GTL Y+ PE++ G ++ K D++S G+ +E P+
Sbjct: 157 FGWSVHAPSSRRTDL---CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 213
Query: 275 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
++ E + R P +++ R NP +RP + EV+
Sbjct: 214 NTYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVL 260
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 129/286 (45%), Gaps = 33/286 (11%)
Query: 40 KQRQDWEIEPSKLVIKSVIARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAAL 97
K+RQ W +E I + +G FG V+ R +A+K+L + + E A +
Sbjct: 2 KKRQ-WALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGV 52
Query: 98 RSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGAL 157
+EV + L HPN+ + G ++ +++ ++EY P G +
Sbjct: 53 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL----------------ILEYAPLGTV 96
Query: 158 KTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFG 217
Y + K + +LA LSY HS++++HRD+K EN+LL +KIADFG
Sbjct: 97 --YRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 154
Query: 218 VARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSF 277
+ S+ D GTL Y+ PE++ G ++ K D++S G+ +E P+ ++
Sbjct: 155 WSVHAPSSRRDTL--CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 212
Query: 278 SEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
E + R P +++ R NP +RP + EV+
Sbjct: 213 QETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVL 256
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 132/288 (45%), Gaps = 32/288 (11%)
Query: 38 LKKQRQDWEIEPSKLVIKSVIARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIA 95
++ +++ W +E I + +G FG V+ R +A+K+L + + E A
Sbjct: 3 MESKKRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKA 54
Query: 96 ALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGG 155
+ +EV + L HPN+ + G ++ +++ ++EY P G
Sbjct: 55 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL----------------ILEYAPRG 98
Query: 156 ALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIAD 215
+ L + K + +LA LSY HS++++HRD+K EN+LL +KIAD
Sbjct: 99 EVYKEL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 156
Query: 216 FGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDL 275
FG + V A + + T GTL Y+ PE++ G ++ K D++S G+ +E P+
Sbjct: 157 FGWS-VHAPS-SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
Query: 276 SFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
++ E + R P +++ R NP +RP + EV+
Sbjct: 215 TYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVL 260
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 132/288 (45%), Gaps = 32/288 (11%)
Query: 38 LKKQRQDWEIEPSKLVIKSVIARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIA 95
++ +++ W +E I + +G FG V+ R +A+K+L + + E A
Sbjct: 3 MESKKRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKA 54
Query: 96 ALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGG 155
+ +EV + L HPN+ + G ++ +++ ++EY P G
Sbjct: 55 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL----------------ILEYAPLG 98
Query: 156 ALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIAD 215
+ Y + K + +LA LSY HS++++HRD+K EN+LL +KIAD
Sbjct: 99 TV--YRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 156
Query: 216 FGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDL 275
FG + V A + + T GTL Y+ PE++ G ++ K D++S G+ +E P+
Sbjct: 157 FGWS-VHAPS-SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
Query: 276 SFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
++ E + R P +++ R NP +RP + EV+
Sbjct: 215 TYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVL 260
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 132/288 (45%), Gaps = 32/288 (11%)
Query: 38 LKKQRQDWEIEPSKLVIKSVIARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIA 95
++ +++ W +E I + +G FG V+ R +A+K+L + + E A
Sbjct: 1 MESKKRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKA 52
Query: 96 ALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGG 155
+ +EV + L HPN+ + G ++ +++ ++EY P G
Sbjct: 53 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL----------------ILEYAPLG 96
Query: 156 ALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIAD 215
+ Y + K + +LA LSY HS++++HRD+K EN+LL +KIAD
Sbjct: 97 TV--YRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 154
Query: 216 FGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDL 275
FG + V A + + T GTL Y+ PE++ G ++ K D++S G+ +E P+
Sbjct: 155 FGWS-VHAPS-SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
Query: 276 SFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
++ E + R P +++ R NP +RP + EV+
Sbjct: 213 TYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 139/313 (44%), Gaps = 49/313 (15%)
Query: 40 KQRQDWEIEPSKLVIKSVIARGTFGTVHRGLYDG-------HDVAVKLLDWGEEGHRTEA 92
KQ + EI S + + FG V++G G VA+K L EG
Sbjct: 16 KQAKLKEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEG----- 70
Query: 93 EIAALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYL 152
LR F E + +L HPNV +G + T++ ++M + Y
Sbjct: 71 ---PLREEFRHEAMLRARLQHPNVVCLLG---------VVTKDQPLSM-------IFSYC 111
Query: 153 PGGALKTYLI------------KNRRRKLAFKV--VVQLALDLARGLSYLHSQKIVHRDV 198
G L +L+ +R K A + V L +A G+ YL S +VH+D+
Sbjct: 112 SHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDL 171
Query: 199 KTENMLLDKNRTVKIADFGVAR-VEASNPNDMTGETGT-LGYMAPEVLNGNPYNRKCDVY 256
T N+L+ VKI+D G+ R V A++ + G + + +MAPE + ++ D++
Sbjct: 172 ATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIW 231
Query: 257 SFGICLWEIYCCDM-PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDK 315
S+G+ LWE++ + PY S +V + + + P P CP+ + +M CW+ P +
Sbjct: 232 SYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLP-CPDDCPAWVYALMIECWNEFPSR 290
Query: 316 RPEMDEVVSMLEA 328
RP ++ S L A
Sbjct: 291 RPRFKDIHSRLRA 303
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 120/263 (45%), Gaps = 30/263 (11%)
Query: 57 VIARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFT-QEVAVWHKLDH 113
++ +GTFG V R G A+K+L R E IA A T E V H
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKIL-------RKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 114 PNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKV 173
P F+ A + + H + C V+EY GG L +L +R R +
Sbjct: 65 P----FLTALKYAFQTH------------DRLCFVMEYANGGELFFHL--SRERVFTEER 106
Query: 174 VVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGET 233
++ L YLHS+ +V+RD+K EN++LDK+ +KI DFG+ + S+ M
Sbjct: 107 ARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFC 166
Query: 234 GTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEI 293
GT Y+APEVL N Y R D + G+ ++E+ C +P+ + + ++ + +R
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR--F 224
Query: 294 PRCCPSSLANVMKRCWDANPDKR 316
PR +++ +P +R
Sbjct: 225 PRTLSPEAKSLLAGLLKKDPKQR 247
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 120/263 (45%), Gaps = 30/263 (11%)
Query: 57 VIARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFT-QEVAVWHKLDH 113
++ +GTFG V R G A+K+L R E IA A T E V H
Sbjct: 17 LLGKGTFGKVILVREKATGRYYAMKIL-------RKEVIIAKDEVAHTVTESRVLQNTRH 69
Query: 114 PNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKV 173
P F+ A + + H + C V+EY GG L +L +R R +
Sbjct: 70 P----FLTALKYAFQTH------------DRLCFVMEYANGGELFFHL--SRERVFTEER 111
Query: 174 VVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGET 233
++ L YLHS+ +V+RD+K EN++LDK+ +KI DFG+ + S+ M
Sbjct: 112 ARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFC 171
Query: 234 GTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEI 293
GT Y+APEVL N Y R D + G+ ++E+ C +P+ + + ++ + +R
Sbjct: 172 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR--F 229
Query: 294 PRCCPSSLANVMKRCWDANPDKR 316
PR +++ +P +R
Sbjct: 230 PRTLSPEAKSLLAGLLKKDPKQR 252
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 130/286 (45%), Gaps = 33/286 (11%)
Query: 40 KQRQDWEIEPSKLVIKSVIARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAAL 97
K+RQ W +E I + +G FG V+ R +A+K+L + + E A +
Sbjct: 2 KKRQ-WALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGV 52
Query: 98 RSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGAL 157
+EV + L HPN+ + G ++ +++ ++EY P G +
Sbjct: 53 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL----------------ILEYAPLGTV 96
Query: 158 KTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFG 217
Y + K + +LA LSY HS++++HRD+K EN+LL +KIADFG
Sbjct: 97 --YRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 154
Query: 218 VARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSF 277
+ S+ T +GTL Y+ PE++ G ++ K D++S G+ +E P+ ++
Sbjct: 155 WSCHAPSSRR--TTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 212
Query: 278 SEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
E + R P +++ R NP +RP + EV+
Sbjct: 213 QETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVL 256
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 101/211 (47%), Gaps = 25/211 (11%)
Query: 58 IARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPNVT 117
+ G FG V++G + VAVK L + L+ F QE+ V K H N+
Sbjct: 39 MGEGGFGVVYKGYVNNTTVAVKKL-----AAMVDITTEELKQQFDQEIKVMAKCQHENLV 93
Query: 118 KFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYL-IKNRRRKLAFKVVVQ 176
+ +G + +L C+V Y+P G+L L + L++ + +
Sbjct: 94 ELLGFSSDGDDL----------------CLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCK 137
Query: 177 LALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGE--TG 234
+A A G+++LH +HRD+K+ N+LLD+ T KI+DFG+AR + G
Sbjct: 138 IAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVG 197
Query: 235 TLGYMAPEVLNGNPYNRKCDVYSFGICLWEI 265
T YMAPE L G K D+YSFG+ L EI
Sbjct: 198 TTAYMAPEALRGE-ITPKSDIYSFGVVLLEI 227
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 130/287 (45%), Gaps = 35/287 (12%)
Query: 40 KQRQDWEIEPSKLVIKSVIARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAAL 97
K+RQ W +E I + +G FG V+ R +A+K+L + + E A +
Sbjct: 1 KKRQ-WALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGV 51
Query: 98 RSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGAL 157
+EV + L HPN+ + G ++ +++ ++EY P G +
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL----------------ILEYAPLGTV 95
Query: 158 KTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFG 217
Y + K + +LA LSY HS++++HRD+K EN+LL +KIADFG
Sbjct: 96 --YRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 153
Query: 218 VA-RVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLS 276
+ +S D+ GTL Y+ PE++ G ++ K D++S G+ +E P+ +
Sbjct: 154 WSVHAPSSRRTDL---CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 210
Query: 277 FSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
+ E + R P +++ R NP +RP + EV+
Sbjct: 211 YQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 130/286 (45%), Gaps = 33/286 (11%)
Query: 40 KQRQDWEIEPSKLVIKSVIARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAAL 97
K+RQ W +E I + +G FG V+ R +A+K+L + + E A +
Sbjct: 6 KKRQ-WALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGV 56
Query: 98 RSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGAL 157
+EV + L HPN+ + G ++ +++ ++EY P G +
Sbjct: 57 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL----------------ILEYAPLGTV 100
Query: 158 KTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFG 217
Y + K + +LA LSY HS++++HRD+K EN+LL +KIADFG
Sbjct: 101 --YRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 158
Query: 218 VARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSF 277
+ V A + + T GTL Y+ PE + G ++ K D++S G+ +E P+ ++
Sbjct: 159 WS-VHAPS-SRRTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTY 216
Query: 278 SEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
E + R P +++ R NP +RP + EV+
Sbjct: 217 QETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPXLREVL 260
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 101/211 (47%), Gaps = 25/211 (11%)
Query: 58 IARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPNVT 117
+ G FG V++G + VAVK L + L+ F QE+ V K H N+
Sbjct: 39 MGEGGFGVVYKGYVNNTTVAVKKL-----AAMVDITTEELKQQFDQEIKVMAKCQHENLV 93
Query: 118 KFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYL-IKNRRRKLAFKVVVQ 176
+ +G + +L C+V Y+P G+L L + L++ + +
Sbjct: 94 ELLGFSSDGDDL----------------CLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCK 137
Query: 177 LALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGE--TG 234
+A A G+++LH +HRD+K+ N+LLD+ T KI+DFG+AR + G
Sbjct: 138 IAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVG 197
Query: 235 TLGYMAPEVLNGNPYNRKCDVYSFGICLWEI 265
T YMAPE L G K D+YSFG+ L EI
Sbjct: 198 TTAYMAPEALRGE-ITPKSDIYSFGVVLLEI 227
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 130/287 (45%), Gaps = 35/287 (12%)
Query: 40 KQRQDWEIEPSKLVIKSVIARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAAL 97
K+RQ W +E I + +G FG V+ R +A+K+L + + E A +
Sbjct: 2 KKRQ-WALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGV 52
Query: 98 RSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGAL 157
+EV + L HPN+ + G ++ +++ ++EY P G +
Sbjct: 53 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL----------------ILEYAPLGTV 96
Query: 158 KTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFG 217
Y + K + +LA LSY HS++++HRD+K EN+LL +KIADFG
Sbjct: 97 --YRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 154
Query: 218 VA-RVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLS 276
+ +S D+ GTL Y+ PE++ G ++ K D++S G+ +E P+ +
Sbjct: 155 WSVHAPSSRRTDL---CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 211
Query: 277 FSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
+ E + R P +++ R NP +RP + EV+
Sbjct: 212 YQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVL 256
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 120/263 (45%), Gaps = 30/263 (11%)
Query: 57 VIARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFT-QEVAVWHKLDH 113
++ +GTFG V R G A+K+L R E IA A T E V H
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKIL-------RKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 114 PNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKV 173
P F+ A + + H + C V+EY GG L +L +R R +
Sbjct: 65 P----FLTALKYAFQTH------------DRLCFVMEYANGGELFFHL--SRERVFTEER 106
Query: 174 VVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGET 233
++ L YLHS+ +V+RD+K EN++LDK+ +KI DFG+ + S+ M
Sbjct: 107 ARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC 166
Query: 234 GTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEI 293
GT Y+APEVL N Y R D + G+ ++E+ C +P+ + + ++ + +R
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR--F 224
Query: 294 PRCCPSSLANVMKRCWDANPDKR 316
PR +++ +P +R
Sbjct: 225 PRTLSPEAKSLLAGLLKKDPKQR 247
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 120/263 (45%), Gaps = 30/263 (11%)
Query: 57 VIARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFT-QEVAVWHKLDH 113
++ +GTFG V R G A+K+L R E IA A T E V H
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKIL-------RKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 114 PNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKV 173
P F+ A + + H + C V+EY GG L +L +R R +
Sbjct: 65 P----FLTALKYAFQTH------------DRLCFVMEYANGGELFFHL--SRERVFTEER 106
Query: 174 VVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGET 233
++ L YLHS+ +V+RD+K EN++LDK+ +KI DFG+ + S+ M
Sbjct: 107 ARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC 166
Query: 234 GTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEI 293
GT Y+APEVL N Y R D + G+ ++E+ C +P+ + + ++ + +R
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR--F 224
Query: 294 PRCCPSSLANVMKRCWDANPDKR 316
PR +++ +P +R
Sbjct: 225 PRTLSPEAKSLLAGLLKKDPKQR 247
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 120/263 (45%), Gaps = 30/263 (11%)
Query: 57 VIARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFT-QEVAVWHKLDH 113
++ +GTFG V R G A+K+L R E IA A T E V H
Sbjct: 15 LLGKGTFGKVILVREKATGRYYAMKIL-------RKEVIIAKDEVAHTVTESRVLQNTRH 67
Query: 114 PNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKV 173
P F+ A + + H + C V+EY GG L +L +R R +
Sbjct: 68 P----FLTALKYAFQTH------------DRLCFVMEYANGGELFFHL--SRERVFTEER 109
Query: 174 VVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGET 233
++ L YLHS+ +V+RD+K EN++LDK+ +KI DFG+ + S+ M
Sbjct: 110 ARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC 169
Query: 234 GTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEI 293
GT Y+APEVL N Y R D + G+ ++E+ C +P+ + + ++ + +R
Sbjct: 170 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR--F 227
Query: 294 PRCCPSSLANVMKRCWDANPDKR 316
PR +++ +P +R
Sbjct: 228 PRTLSPEAKSLLAGLLKKDPKQR 250
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 120/263 (45%), Gaps = 30/263 (11%)
Query: 57 VIARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFT-QEVAVWHKLDH 113
++ +GTFG V R G A+K+L R E IA A T E V H
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKIL-------RKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 114 PNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKV 173
P F+ A + + H + C V+EY GG L +L +R R +
Sbjct: 65 P----FLTALKYAFQTH------------DRLCFVMEYANGGELFFHL--SRERVFTEER 106
Query: 174 VVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGET 233
++ L YLHS+ +V+RD+K EN++LDK+ +KI DFG+ + S+ M
Sbjct: 107 ARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFC 166
Query: 234 GTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEI 293
GT Y+APEVL N Y R D + G+ ++E+ C +P+ + + ++ + +R
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR--F 224
Query: 294 PRCCPSSLANVMKRCWDANPDKR 316
PR +++ +P +R
Sbjct: 225 PRTLSPEAKSLLAGLLKKDPKQR 247
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 120/263 (45%), Gaps = 30/263 (11%)
Query: 57 VIARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFT-QEVAVWHKLDH 113
++ +GTFG V R G A+K+L R E IA A T E V H
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKIL-------RKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 114 PNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKV 173
P F+ A + + H + C V+EY GG L +L +R R +
Sbjct: 65 P----FLTALKYAFQTH------------DRLCFVMEYANGGELFFHL--SRERVFTEER 106
Query: 174 VVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGET 233
++ L YLHS+ +V+RD+K EN++LDK+ +KI DFG+ + S+ M
Sbjct: 107 ARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFC 166
Query: 234 GTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEI 293
GT Y+APEVL N Y R D + G+ ++E+ C +P+ + + ++ + +R
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR--F 224
Query: 294 PRCCPSSLANVMKRCWDANPDKR 316
PR +++ +P +R
Sbjct: 225 PRTLSPEAKSLLAGLLKKDPKQR 247
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 129/278 (46%), Gaps = 34/278 (12%)
Query: 54 IKSVIARGTFGTVHRG--LYDGHDVAVK---LLDWGEEGHRTEAEIAALRSAFTQEVAVW 108
I+ I RG F V+R L DG VA+K + D + A R+ +E+ +
Sbjct: 36 IEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMD---------AKARADCIKEIDLL 86
Query: 109 HKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYL--IKNRR 166
+L+HPNV K+ + + +EL+I V+E G L + K ++
Sbjct: 87 KQLNHPNVIKYYASFIEDNELNI----------------VLELADAGDLSRMIKHFKKQK 130
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
R + + V + + L L ++HS++++HRD+K N+ + VK+ D G+ R +S
Sbjct: 131 RLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT 190
Query: 227 NDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPY--PDLSFSEVTSAV 284
GT YM+PE ++ N YN K D++S G L+E+ P+ ++ + +
Sbjct: 191 TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKI 250
Query: 285 VRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 322
+ + P L ++ C + +P+KRP++ V
Sbjct: 251 EQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYV 288
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 132/288 (45%), Gaps = 32/288 (11%)
Query: 38 LKKQRQDWEIEPSKLVIKSVIARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIA 95
++ +++ W +E I + +G FG V+ R +A+K+L + + E A
Sbjct: 1 MESKKRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKA 52
Query: 96 ALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGG 155
+ +EV + L HPN+ + G ++ +++ ++EY P G
Sbjct: 53 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL----------------ILEYAPLG 96
Query: 156 ALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIAD 215
+ L + K + +LA LSY HS++++HRD+K EN+LL +KIAD
Sbjct: 97 TVYREL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 154
Query: 216 FGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDL 275
FG + V A + + T GTL Y+ PE++ G ++ K D++S G+ +E P+
Sbjct: 155 FGWS-VHAPS-SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
Query: 276 SFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
++ E + R P +++ R NP +RP + EV+
Sbjct: 213 TYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 129/288 (44%), Gaps = 32/288 (11%)
Query: 38 LKKQRQDWEIEPSKLVIKSVIARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIA 95
++ +++ W +E I + +G FG V+ R +A+K+L + + E A
Sbjct: 3 MESKKRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKA 54
Query: 96 ALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGG 155
+ +EV + L HPN+ + G ++ +++ ++EY P G
Sbjct: 55 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL----------------ILEYAPRG 98
Query: 156 ALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIAD 215
+ L + K + +LA LSY HS++++HRD+K EN+LL +KIAD
Sbjct: 99 EVYKEL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 156
Query: 216 FGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDL 275
FG + S+ GTL Y+ PE++ G ++ K D++S G+ +E P+
Sbjct: 157 FGWSVHAPSSRRXXL--XGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
Query: 276 SFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
++ E + R P +++ R NP +RP + EV+
Sbjct: 215 TYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVL 260
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 101/211 (47%), Gaps = 25/211 (11%)
Query: 58 IARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPNVT 117
+ G FG V++G + VAVK L + L+ F QE+ V K H N+
Sbjct: 33 MGEGGFGVVYKGYVNNTTVAVKKL-----AAMVDITTEELKQQFDQEIKVMAKCQHENLV 87
Query: 118 KFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYL-IKNRRRKLAFKVVVQ 176
+ +G + +L C+V Y+P G+L L + L++ + +
Sbjct: 88 ELLGFSSDGDDL----------------CLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCK 131
Query: 177 LALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGE--TG 234
+A A G+++LH +HRD+K+ N+LLD+ T KI+DFG+AR + G
Sbjct: 132 IAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVG 191
Query: 235 TLGYMAPEVLNGNPYNRKCDVYSFGICLWEI 265
T YMAPE L G K D+YSFG+ L EI
Sbjct: 192 TTAYMAPEALRGE-ITPKSDIYSFGVVLLEI 221
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 136/307 (44%), Gaps = 49/307 (15%)
Query: 46 EIEPSKLVIKSVIARGTFGTVHRGLYDG-------HDVAVKLLDWGEEGHRTEAEIAALR 98
EI S + + FG V++G G VA+K L EG LR
Sbjct: 5 EISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEG--------PLR 56
Query: 99 SAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALK 158
F E + +L HPNV +G + T++ ++M + Y G L
Sbjct: 57 EEFRHEAMLRARLQHPNVVCLLG---------VVTKDQPLSM-------IFSYCSHGDLH 100
Query: 159 TYLI------------KNRRRKLAFKV--VVQLALDLARGLSYLHSQKIVHRDVKTENML 204
+L+ +R K A + V L +A G+ YL S +VH+D+ T N+L
Sbjct: 101 EFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVL 160
Query: 205 LDKNRTVKIADFGVAR-VEASNPNDMTGETGT-LGYMAPEVLNGNPYNRKCDVYSFGICL 262
+ VKI+D G+ R V A++ + G + + +MAPE + ++ D++S+G+ L
Sbjct: 161 VYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVL 220
Query: 263 WEIYCCDM-PYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDE 321
WE++ + PY S +V + + + P P CP+ + +M CW+ P +RP +
Sbjct: 221 WEVFSYGLQPYCGYSNQDVVEMIRNRQVLP-CPDDCPAWVYALMIECWNEFPSRRPRFKD 279
Query: 322 VVSMLEA 328
+ S L A
Sbjct: 280 IHSRLRA 286
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 129/284 (45%), Gaps = 32/284 (11%)
Query: 42 RQDWEIEPSKLVIKSVIARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRS 99
++ W +E I + +G FG V+ R +A+K+L + + E A +
Sbjct: 6 KRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGVEH 57
Query: 100 AFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKT 159
+EV + L HPN+ + G ++ +++ ++EY P G +
Sbjct: 58 QLRREVEIQSHLRHPNILRLYGYFHDATRVYL----------------ILEYAPLGTVYR 101
Query: 160 YLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVA 219
L + K + +LA LSY HS++++HRD+K EN+LL +KIADFG +
Sbjct: 102 EL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 159
Query: 220 RVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSE 279
V A + + T GTL Y+ PE++ G ++ K D++S G+ +E P+ ++ E
Sbjct: 160 -VHAPS-SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 217
Query: 280 VTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
+ R P +++ R NP +RP + EV+
Sbjct: 218 TYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVL 259
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 128/284 (45%), Gaps = 34/284 (11%)
Query: 43 QDWEIEPSKLVIKSVIARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSA 100
+ W +E I + +G FG V+ R +A+K+L + + E A +
Sbjct: 6 RQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGVEHQ 57
Query: 101 FTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTY 160
+EV + L HPN+ + G ++ +++ ++EY P G +
Sbjct: 58 LRREVEIQSHLRHPNILRLYGYFHDATRVYL----------------ILEYAPLGTVYRE 101
Query: 161 LIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVA- 219
L + K + +LA LSY HS++++HRD+K EN+LL +KIADFG +
Sbjct: 102 L--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 159
Query: 220 RVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSE 279
+S +D+ GTL Y+ PE++ G ++ K D++S G+ +E P+ ++ E
Sbjct: 160 HAPSSRRDDL---CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 216
Query: 280 VTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
+ R P +++ R NP +RP + EV+
Sbjct: 217 TYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 128/285 (44%), Gaps = 34/285 (11%)
Query: 42 RQDWEIEPSKLVIKSVIARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRS 99
++ W +E I + +G FG V+ R +A+K+L + + E A +
Sbjct: 2 KRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGVEH 53
Query: 100 AFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKT 159
+EV + L HPN+ + G ++ +++ ++EY P G +
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYL----------------ILEYAPLGTV-- 95
Query: 160 YLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVA 219
Y + K + +LA LSY HS++++HRD+K EN+LL +KIADFG +
Sbjct: 96 YRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 155
Query: 220 -RVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFS 278
+S D+ GTL Y+ PE++ G ++ K D++S G+ +E P+ ++
Sbjct: 156 VHAPSSRRTDL---CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 212
Query: 279 EVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
E + R P +++ R NP +RP + EV+
Sbjct: 213 ETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 129/284 (45%), Gaps = 32/284 (11%)
Query: 42 RQDWEIEPSKLVIKSVIARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRS 99
++ W +E I + +G FG V+ R +A+K+L + + E A +
Sbjct: 2 KRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGVEH 53
Query: 100 AFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKT 159
+EV + L HPN+ + G ++ +++ ++EY P G +
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYL----------------ILEYAPLGTVYR 97
Query: 160 YLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVA 219
L + K + +LA LSY HS++++HRD+K EN+LL +KIADFG +
Sbjct: 98 EL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 155
Query: 220 RVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSE 279
V A + + T GTL Y+ PE++ G ++ K D++S G+ +E P+ ++ E
Sbjct: 156 -VHAPS-SRRTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 213
Query: 280 VTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
+ R P +++ R NP +RP + EV+
Sbjct: 214 TYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 129/284 (45%), Gaps = 32/284 (11%)
Query: 42 RQDWEIEPSKLVIKSVIARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRS 99
++ W +E I + +G FG V+ R +A+K+L + + E A +
Sbjct: 1 KRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGVEH 52
Query: 100 AFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKT 159
+EV + L HPN+ + G ++ +++ ++EY P G +
Sbjct: 53 QLRREVEIQSHLRHPNILRLYGYFHDATRVYL----------------ILEYAPLGTVYR 96
Query: 160 YLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVA 219
L + K + +LA LSY HS++++HRD+K EN+LL +KIADFG +
Sbjct: 97 EL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 154
Query: 220 RVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSE 279
V A + + T GTL Y+ PE++ G ++ K D++S G+ +E P+ ++ E
Sbjct: 155 -VHAPS-SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 212
Query: 280 VTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
+ R P +++ R NP +RP + EV+
Sbjct: 213 TYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVL 254
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 128/283 (45%), Gaps = 32/283 (11%)
Query: 43 QDWEIEPSKLVIKSVIARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSA 100
+ W +E I + +G FG V+ R +A+K+L + + E A +
Sbjct: 3 RQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGVEHQ 54
Query: 101 FTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTY 160
+EV + L HPN+ + G ++ +++ ++EY P G + Y
Sbjct: 55 LRREVEIQSHLRHPNILRLYGYFHDATRVYL----------------ILEYAPLGTV--Y 96
Query: 161 LIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR 220
+ K + +LA LSY HS++++HRD+K EN+LL +KIADFG +
Sbjct: 97 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS- 155
Query: 221 VEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEV 280
V A + + T GTL Y+ PE++ G ++ K D++S G+ +E P+ ++ E
Sbjct: 156 VHAPS-SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
Query: 281 TSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
+ R P +++ R NP +RP + EV+
Sbjct: 215 YKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 128/283 (45%), Gaps = 32/283 (11%)
Query: 43 QDWEIEPSKLVIKSVIARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSA 100
+ W +E I + +G FG V+ R +A+K+L + + E A +
Sbjct: 3 RQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGVEHQ 54
Query: 101 FTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTY 160
+EV + L HPN+ + G ++ +++ ++EY P G + Y
Sbjct: 55 LRREVEIQSHLRHPNILRLYGYFHDATRVYL----------------ILEYAPLGTV--Y 96
Query: 161 LIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR 220
+ K + +LA LSY HS++++HRD+K EN+LL +KIADFG +
Sbjct: 97 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS- 155
Query: 221 VEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEV 280
V A + + T GTL Y+ PE++ G ++ K D++S G+ +E P+ ++ E
Sbjct: 156 VHAPS-SRRTELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
Query: 281 TSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
+ R P +++ R NP +RP + EV+
Sbjct: 215 YKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 132/288 (45%), Gaps = 32/288 (11%)
Query: 38 LKKQRQDWEIEPSKLVIKSVIARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIA 95
++ +++ W +E I + +G FG V+ R +A+K+L + + E A
Sbjct: 1 MESKKRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKA 52
Query: 96 ALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGG 155
+ +EV + L HPN+ + G ++ +++ ++EY P G
Sbjct: 53 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL----------------ILEYAPLG 96
Query: 156 ALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIAD 215
+ L + K + +LA LSY HS++++HRD+K EN+LL +KIA+
Sbjct: 97 TVYREL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIAN 154
Query: 216 FGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDL 275
FG + V A + + T GTL Y+ PE++ G ++ K D++S G+ +E P+
Sbjct: 155 FGWS-VHAPS-SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
Query: 276 SFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
++ E + R P +++ R NP +RP + EV+
Sbjct: 213 TYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 129/288 (44%), Gaps = 32/288 (11%)
Query: 38 LKKQRQDWEIEPSKLVIKSVIARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIA 95
++ +++ W +E I + +G FG V+ R +A+K+L + + E A
Sbjct: 1 MESKKRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKA 52
Query: 96 ALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGG 155
+ +EV + L HPN+ + G ++ +++ ++EY P G
Sbjct: 53 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL----------------ILEYAPLG 96
Query: 156 ALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIAD 215
+ L + K + +LA LSY HS++++HRD+K EN+LL +KIAD
Sbjct: 97 TVYREL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 154
Query: 216 FGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDL 275
FG + S+ GTL Y+ PE++ G ++ K D++S G+ +E P+
Sbjct: 155 FGWSVHAPSSRRXXL--CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
Query: 276 SFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
++ E + R P +++ R NP +RP + EV+
Sbjct: 213 TYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 131/286 (45%), Gaps = 33/286 (11%)
Query: 40 KQRQDWEIEPSKLVIKSVIARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAAL 97
K+RQ W +E I + +G FG V+ R +A+K+L + + E A +
Sbjct: 3 KKRQ-WALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGV 53
Query: 98 RSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGAL 157
+EV + L HPN+ + G ++ +++ ++EY P G +
Sbjct: 54 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL----------------ILEYAPLGTV 97
Query: 158 KTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFG 217
Y + K + +LA LSY HS++++HRD+K EN+LL +KIA+FG
Sbjct: 98 --YRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFG 155
Query: 218 VARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSF 277
+ V A + + T GTL Y+ PE++ G ++ K D++S G+ +E P+ ++
Sbjct: 156 WS-VHAPS-SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 213
Query: 278 SEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
E + R P +++ R NP +RP + EV+
Sbjct: 214 QETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVL 257
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 128/286 (44%), Gaps = 33/286 (11%)
Query: 40 KQRQDWEIEPSKLVIKSVIARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAAL 97
K+RQ W +E I + +G FG V+ R +A+K+L + + E A +
Sbjct: 3 KKRQ-WALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGV 53
Query: 98 RSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGAL 157
+EV + L HPN+ + G ++ +++ ++EY P G +
Sbjct: 54 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL----------------ILEYAPLGTV 97
Query: 158 KTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFG 217
Y + K + +LA LSY HS++++HRD+K EN+LL +KIADFG
Sbjct: 98 --YRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 155
Query: 218 VARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSF 277
+ S+ GTL Y+ PE++ G ++ K D++S G+ +E P+ ++
Sbjct: 156 WSVHAPSSRRXXL--CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 213
Query: 278 SEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
E + R P +++ R NP +RP + EV+
Sbjct: 214 QETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVL 257
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 127/277 (45%), Gaps = 33/277 (11%)
Query: 57 VIARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHP 114
I G++G R DG + K LD+G TEAE + EV + +L HP
Sbjct: 13 TIGTGSYGRCQKIRRKSDGKILVWKELDYGS---MTEAE----KQMLVSEVNLLRELKHP 65
Query: 115 NVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIK--NRRRKLAFK 172
N+ ++ + + + +V+EY GG L + + K R+ L +
Sbjct: 66 NIVRYYDRIIDRT--------------NTTLYIVMEYCEGGDLASVITKGTKERQYLDEE 111
Query: 173 VVVQLALDLARGLSYLHSQK-----IVHRDVKTENMLLDKNRTVKIADFGVARVEASNPN 227
V+++ L L H + ++HRD+K N+ LD + VK+ DFG+AR+ + +
Sbjct: 112 FVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTS 171
Query: 228 DMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA-VVR 286
GT YM+PE +N YN K D++S G L+E+ C MP P +FS+ A +R
Sbjct: 172 FAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL-CALMP-PFTAFSQKELAGKIR 229
Query: 287 QNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
+ IP L ++ R + RP ++E++
Sbjct: 230 EGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEIL 266
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 142/324 (43%), Gaps = 82/324 (25%)
Query: 48 EPS----KLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQ 103
EPS L + +I RG +G V++G D VAVK+ + A R F
Sbjct: 7 EPSLDLDNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSF------------ANRQNFIN 54
Query: 104 EVAVWH--KLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYL 161
E ++ ++H N+ +FI +G + T +G++ +V+EY P G+L YL
Sbjct: 55 EKNIYRVPLMEHDNIARFI---VGDERV---TADGRMEY-----LLVMEYYPNGSLXKYL 103
Query: 162 IKNRRRKLAFKVVVQLALDLARGLSYLHSQ---------KIVHRDVKTENMLLDKNRTVK 212
+ ++ +LA + RGL+YLH++ I HRD+ + N+L+ + T
Sbjct: 104 SLHTSDWVS---SCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCV 160
Query: 213 IADFGVARVEASN--------PNDMTGETGTLGYMAPEVLNGNPYNR-------KCDVYS 257
I+DFG++ N N E GT+ YMAPEVL G R + D+Y+
Sbjct: 161 ISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYA 220
Query: 258 FGICLWEIY--CCDMPYPDLS-----------------FSEVTSAVVRQNLRPEIPRCCP 298
G+ WEI+ C D+ +P S F ++ V R+ RP+ P
Sbjct: 221 LGLIYWEIFMRCTDL-FPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWK 279
Query: 299 S------SLANVMKRCWDANPDKR 316
SL ++ CWD + + R
Sbjct: 280 ENSLAVRSLKETIEDCWDQDAEAR 303
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 128/284 (45%), Gaps = 32/284 (11%)
Query: 42 RQDWEIEPSKLVIKSVIARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRS 99
++ W +E I + +G FG V+ R +A+K+L + + E A +
Sbjct: 2 KRQWALE--DFEIGRPLGKGKFGNVYLAREKNSKFILALKVL------FKAQLEKAGVEH 53
Query: 100 AFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKT 159
+EV + L HPN+ + G S+ +++ ++EY P G +
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDSTRVYL----------------ILEYAPLGTVYR 97
Query: 160 YLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVA 219
L + K + +LA LSY HS+K++HRD+K EN+LL +KIADFG +
Sbjct: 98 EL--QKLSKFDEQRTATYITELANALSYCHSKKVIHRDIKPENLLLGSAGELKIADFGWS 155
Query: 220 RVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSE 279
V A + + GTL Y+ PE++ G ++ K D++S G+ +E P+ ++ +
Sbjct: 156 -VHAPS-SRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQD 213
Query: 280 VTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
+ R P +++ R NP +RP + EV+
Sbjct: 214 TYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 127/277 (45%), Gaps = 33/277 (11%)
Query: 57 VIARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHP 114
I G++G R DG + K LD+G TEAE + EV + +L HP
Sbjct: 13 TIGTGSYGRCQKIRRKSDGKILVWKELDYGS---MTEAE----KQMLVSEVNLLRELKHP 65
Query: 115 NVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIK--NRRRKLAFK 172
N+ ++ + + + +V+EY GG L + + K R+ L +
Sbjct: 66 NIVRYYDRIIDRT--------------NTTLYIVMEYCEGGDLASVITKGTKERQYLDEE 111
Query: 173 VVVQLALDLARGLSYLHSQK-----IVHRDVKTENMLLDKNRTVKIADFGVARVEASNPN 227
V+++ L L H + ++HRD+K N+ LD + VK+ DFG+AR+ + +
Sbjct: 112 FVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDED 171
Query: 228 DMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA-VVR 286
GT YM+PE +N YN K D++S G L+E+ C MP P +FS+ A +R
Sbjct: 172 FAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL-CALMP-PFTAFSQKELAGKIR 229
Query: 287 QNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
+ IP L ++ R + RP ++E++
Sbjct: 230 EGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEIL 266
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 128/284 (45%), Gaps = 32/284 (11%)
Query: 42 RQDWEIEPSKLVIKSVIARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRS 99
++ W +E I + +G FG V+ R +A+K+L + + E A +
Sbjct: 2 KRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGVEH 53
Query: 100 AFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKT 159
+EV + L HPN+ + G ++ +++ ++EY P G +
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYL----------------ILEYAPLGTVYR 97
Query: 160 YLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVA 219
L + K + +LA LSY HS++++HRD+K EN+LL +KIADFG +
Sbjct: 98 EL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 155
Query: 220 RVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSE 279
V A + + GTL Y+ PE++ G ++ K D++S G+ +E P+ ++ E
Sbjct: 156 -VHAPS-SRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 213
Query: 280 VTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
+ R P +++ R NP +RP + EV+
Sbjct: 214 TYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 126/275 (45%), Gaps = 28/275 (10%)
Query: 57 VIARGTFGTVHRGLY--DGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHP 114
+I G FG V + + DG +K + + E + E E+ AL KLDH
Sbjct: 18 LIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNE--KAEREVKAL-----------AKLDHV 64
Query: 115 NVTKFIGATMGSSELHIQTENGQVAMPSNICCVV-VEYLPGGALKTYLIKNRRRKLAFKV 173
N+ + G G + +T + + C + +E+ G L+ ++ K R KL +
Sbjct: 65 NIVHYNGCWDGF-DYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVL 123
Query: 174 VVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGET 233
++L + +G+ Y+HS+K+++RD+K N+ L + VKI DFG+ N
Sbjct: 124 ALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLV-TSLKNDGKRXRSK 182
Query: 234 GTLGYMAPEVLNGNPYNRKCDVYSFGICLWE-IYCCDMPYPDLS-FSEVTSAVVRQNLRP 291
GTL YM+PE ++ Y ++ D+Y+ G+ L E ++ CD + F+++ +
Sbjct: 183 GTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGI------- 235
Query: 292 EIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSML 326
I ++++ P+ RP E++ L
Sbjct: 236 -ISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTL 269
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 138/321 (42%), Gaps = 69/321 (21%)
Query: 51 KLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHK 110
++ + + +G +G V RG + G +VAVK+ +E ++ +E +++
Sbjct: 9 QITLLECVGKGRYGEVWRGSWQGENVAVKIFSSRDE------------KSWFRETELYNT 56
Query: 111 --LDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRK 168
L H N+ FI + M S Q ++ Y G+L YL +
Sbjct: 57 VMLRHENILGFIASDMTSRHSSTQ------------LWLITHYHEMGSLYDYL---QLTT 101
Query: 169 LAFKVVVQLALDLARGLSYLHSQ--------KIVHRDVKTENMLLDKNRTVKIADFGVAR 220
L +++ L +A GL++LH + I HRD+K++N+L+ KN IAD G+A
Sbjct: 102 LDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAV 161
Query: 221 VEASNPNDM----TGETGTLGYMAPEVLNG-------NPYNRKCDVYSFGICLWEIY--- 266
+ + + N + GT YMAPEVL+ + Y R D+++FG+ LWE+
Sbjct: 162 MHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKR-VDIWAFGLVLWEVARRM 220
Query: 267 ------------CCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPS-----SLANVMKRCW 309
D+ D SF ++ V RP IP S SLA +MK CW
Sbjct: 221 VSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECW 280
Query: 310 DANPDKRPEMDEVVSMLEAID 330
NP R + L ID
Sbjct: 281 YQNPSARLTALRIKKTLTKID 301
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 127/277 (45%), Gaps = 33/277 (11%)
Query: 57 VIARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHP 114
I G++G R DG + K LD+G TEAE + EV + +L HP
Sbjct: 13 TIGTGSYGRCQKIRRKSDGKILVWKELDYGS---MTEAE----KQMLVSEVNLLRELKHP 65
Query: 115 NVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIK--NRRRKLAFK 172
N+ ++ + + + +V+EY GG L + + K R+ L +
Sbjct: 66 NIVRYYDRIIDRT--------------NTTLYIVMEYCEGGDLASVITKGTKERQYLDEE 111
Query: 173 VVVQLALDLARGLSYLHSQK-----IVHRDVKTENMLLDKNRTVKIADFGVARVEASNPN 227
V+++ L L H + ++HRD+K N+ LD + VK+ DFG+AR+ + +
Sbjct: 112 FVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTS 171
Query: 228 DMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA-VVR 286
GT YM+PE +N YN K D++S G L+E+ C MP P +FS+ A +R
Sbjct: 172 FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL-CALMP-PFTAFSQKELAGKIR 229
Query: 287 QNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
+ IP L ++ R + RP ++E++
Sbjct: 230 EGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEIL 266
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 135/308 (43%), Gaps = 53/308 (17%)
Query: 47 IEPSKLVIKSVIARGTFGTVHRGLYDGHD---------VAVKLLDWGEEGHRTEAEIAAL 97
I+ +V+K + G FG V L + H+ VAVK L E R +
Sbjct: 38 IKRRDIVLKWELGEGAFGKVF--LAECHNLLPEQDKMLVAVKALKEASESARQD------ 89
Query: 98 RSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGAL 157
F +E + L H ++ +F G + TE + M V EY+ G L
Sbjct: 90 ---FQREAELLTMLQHQHIVRFFG---------VCTEGRPLLM-------VFEYMRHGDL 130
Query: 158 KTYLIKNRRRK-------------LAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENML 204
+L + L ++ +A +A G+ YL VHRD+ T N L
Sbjct: 131 NRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCL 190
Query: 205 LDKNRTVKIADFGVAR-VEASNPNDMTGETGT-LGYMAPEVLNGNPYNRKCDVYSFGICL 262
+ + VKI DFG++R + +++ + G T + +M PE + + + DV+SFG+ L
Sbjct: 191 VGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVL 250
Query: 263 WEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDE 321
WEI+ P+ LS +E + Q E PR CP + +M+ CW P +R + +
Sbjct: 251 WEIFTYGKQPWYQLSNTEAIDCIT-QGRELERPRACPPEVYAIMRGCWQREPQQRHSIKD 309
Query: 322 VVSMLEAI 329
V + L+A+
Sbjct: 310 VHARLQAL 317
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 127/283 (44%), Gaps = 32/283 (11%)
Query: 43 QDWEIEPSKLVIKSVIARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSA 100
+ W +E I + +G FG V+ R +A+K+L + + E A +
Sbjct: 6 RQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGVEHQ 57
Query: 101 FTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTY 160
+EV + L HPN+ + G ++ +++ ++EY P G + Y
Sbjct: 58 LRREVEIQSHLRHPNILRLYGYFHDATRVYL----------------ILEYAPLGTV--Y 99
Query: 161 LIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR 220
+ K + +LA LSY HS++++HRD+K EN+LL +KIADFG +
Sbjct: 100 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS- 158
Query: 221 VEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEV 280
V A + + GTL Y+ PE++ G ++ K D++S G+ +E P+ ++ E
Sbjct: 159 VHAPS-SRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 217
Query: 281 TSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
+ R P +++ R NP +RP + EV+
Sbjct: 218 YKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 138/321 (42%), Gaps = 69/321 (21%)
Query: 51 KLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHK 110
++ + + +G +G V RG + G +VAVK+ +E ++ +E +++
Sbjct: 38 QITLLECVGKGRYGEVWRGSWQGENVAVKIFSSRDE------------KSWFRETELYNT 85
Query: 111 --LDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRK 168
L H N+ FI + M S Q ++ Y G+L YL +
Sbjct: 86 VMLRHENILGFIASDMTSRHSSTQ------------LWLITHYHEMGSLYDYL---QLTT 130
Query: 169 LAFKVVVQLALDLARGLSYLHSQ--------KIVHRDVKTENMLLDKNRTVKIADFGVAR 220
L +++ L +A GL++LH + I HRD+K++N+L+ KN IAD G+A
Sbjct: 131 LDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAV 190
Query: 221 VEASNPNDM----TGETGTLGYMAPEVLNG-------NPYNRKCDVYSFGICLWEIY--- 266
+ + + N + GT YMAPEVL+ + Y R D+++FG+ LWE+
Sbjct: 191 MHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKR-VDIWAFGLVLWEVARRM 249
Query: 267 ------------CCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPS-----SLANVMKRCW 309
D+ D SF ++ V RP IP S SLA +MK CW
Sbjct: 250 VSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECW 309
Query: 310 DANPDKRPEMDEVVSMLEAID 330
NP R + L ID
Sbjct: 310 YQNPSARLTALRIKKTLTKID 330
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 132/305 (43%), Gaps = 47/305 (15%)
Query: 46 EIEPSKLVIKSVIARGTFGTVHRGL-------YDGHDVAVKLLDWGEEGHRTEAEIAALR 98
I+ +V+K + G FG V D VAVK L + R +
Sbjct: 9 HIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKD------- 61
Query: 99 SAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALK 158
F +E + L H ++ KF G V + + +V EY+ G L
Sbjct: 62 --FHREAELLTNLQHEHIVKFYG----------------VCVEGDPLIMVFEYMKHGDLN 103
Query: 159 TYLIK-----------NRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDK 207
+L N +L ++ +A +A G+ YL SQ VHRD+ T N L+ +
Sbjct: 104 KFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGE 163
Query: 208 NRTVKIADFGVAR-VEASNPNDMTGETGT-LGYMAPEVLNGNPYNRKCDVYSFGICLWEI 265
N VKI DFG++R V +++ + G T + +M PE + + + DV+S G+ LWEI
Sbjct: 164 NLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEI 223
Query: 266 YCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVS 324
+ P+ LS +EV + Q + PR CP + +M CW P R + + +
Sbjct: 224 FTYGKQPWYQLSNNEVIECIT-QGRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHT 282
Query: 325 MLEAI 329
+L+ +
Sbjct: 283 LLQNL 287
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 126/284 (44%), Gaps = 32/284 (11%)
Query: 42 RQDWEIEPSKLVIKSVIARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRS 99
++ W +E I + +G FG V+ R +A+K+L + + E A +
Sbjct: 2 KRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGVEH 53
Query: 100 AFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKT 159
+EV + L HPN+ + G ++ +++ ++EY P G +
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYL----------------ILEYAPLGTVYR 97
Query: 160 YLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVA 219
L + K + +LA LSY HS++++HRD+K EN+LL +KIADFG +
Sbjct: 98 EL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 155
Query: 220 RVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSE 279
S+ GTL Y+ PE++ G ++ K D++S G+ +E P+ ++ E
Sbjct: 156 VHAPSSRRXXL--CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 213
Query: 280 VTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
+ R P +++ R NP +RP + EV+
Sbjct: 214 TYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 135/314 (42%), Gaps = 69/314 (21%)
Query: 58 IARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHK--LDHPN 115
+ +G +G V RG + G +VAVK+ +E ++ +E +++ L H N
Sbjct: 16 VGKGRYGEVWRGSWQGENVAVKIFSSRDE------------KSWFRETELYNTVMLRHEN 63
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVV 175
+ FI + M S Q ++ Y G+L YL + L +
Sbjct: 64 ILGFIASDMTSRHSSTQ------------LWLITHYHEMGSLYDYL---QLTTLDTVSCL 108
Query: 176 QLALDLARGLSYLHSQ--------KIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPN 227
++ L +A GL++LH + I HRD+K++N+L+ KN IAD G+A + + + N
Sbjct: 109 RIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTN 168
Query: 228 DM----TGETGTLGYMAPEVLNG-------NPYNRKCDVYSFGICLWEIY---------- 266
+ GT YMAPEVL+ + Y R D+++FG+ LWE+
Sbjct: 169 QLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKR-VDIWAFGLVLWEVARRMVSNGIVE 227
Query: 267 -----CCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPS-----SLANVMKRCWDANPDKR 316
D+ D SF ++ V RP IP S SLA +MK CW NP R
Sbjct: 228 DYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSAR 287
Query: 317 PEMDEVVSMLEAID 330
+ L ID
Sbjct: 288 LTALRIKKTLTKID 301
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 135/308 (43%), Gaps = 53/308 (17%)
Query: 47 IEPSKLVIKSVIARGTFGTVHRGLYDGHD---------VAVKLLDWGEEGHRTEAEIAAL 97
I+ +V+K + G FG V L + H+ VAVK L E R +
Sbjct: 15 IKRRDIVLKWELGEGAFGKVF--LAECHNLLPEQDKMLVAVKALKEASESARQD------ 66
Query: 98 RSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGAL 157
F +E + L H ++ +F G + TE + M V EY+ G L
Sbjct: 67 ---FQREAELLTMLQHQHIVRFFG---------VCTEGRPLLM-------VFEYMRHGDL 107
Query: 158 KTYLIKNRRRK-------------LAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENML 204
+L + L ++ +A +A G+ YL VHRD+ T N L
Sbjct: 108 NRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCL 167
Query: 205 LDKNRTVKIADFGVAR-VEASNPNDMTGETGT-LGYMAPEVLNGNPYNRKCDVYSFGICL 262
+ + VKI DFG++R + +++ + G T + +M PE + + + DV+SFG+ L
Sbjct: 168 VGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVL 227
Query: 263 WEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDE 321
WEI+ P+ LS +E + Q E PR CP + +M+ CW P +R + +
Sbjct: 228 WEIFTYGKQPWYQLSNTEAIDCIT-QGRELERPRACPPEVYAIMRGCWQREPQQRHSIKD 286
Query: 322 VVSMLEAI 329
V + L+A+
Sbjct: 287 VHARLQAL 294
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 127/284 (44%), Gaps = 32/284 (11%)
Query: 42 RQDWEIEPSKLVIKSVIARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRS 99
++ W +E I + +G FG V+ R +A+K+L +T+ E A +
Sbjct: 6 KRQWTLE--DFDIGRPLGKGKFGNVYLARERQSKFILALKVL------FKTQLEKAGVEH 57
Query: 100 AFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKT 159
+EV + L HPN+ + G ++ +++ ++EY P G +
Sbjct: 58 QLRREVEIQSHLRHPNILRLYGYFHDATRVYL----------------ILEYAPLGTVYR 101
Query: 160 YLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVA 219
L K R + +LA LSY HS++++HRD+K EN+LL N +KIADFG +
Sbjct: 102 ELQKLSR--FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWS 159
Query: 220 RVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSE 279
S+ D GTL Y+ PE++ G ++ K D++S G+ +E P+ ++ E
Sbjct: 160 VHAPSSRRDTL--CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQE 217
Query: 280 VTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
+ R P +++ R N +R + EV+
Sbjct: 218 TYRRISRVEF--TFPDFVTEGARDLISRLLKHNASQRLTLAEVL 259
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 135/308 (43%), Gaps = 53/308 (17%)
Query: 47 IEPSKLVIKSVIARGTFGTVHRGLYDGHD---------VAVKLLDWGEEGHRTEAEIAAL 97
I+ +V+K + G FG V L + H+ VAVK L E R +
Sbjct: 9 IKRRDIVLKWELGEGAFGKVF--LAECHNLLPEQDKMLVAVKALKEASESARQD------ 60
Query: 98 RSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGAL 157
F +E + L H ++ +F G + TE + M V EY+ G L
Sbjct: 61 ---FQREAELLTMLQHQHIVRFFG---------VCTEGRPLLM-------VFEYMRHGDL 101
Query: 158 KTYLIKNRRRK-------------LAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENML 204
+L + L ++ +A +A G+ YL VHRD+ T N L
Sbjct: 102 NRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCL 161
Query: 205 LDKNRTVKIADFGVAR-VEASNPNDMTGETGT-LGYMAPEVLNGNPYNRKCDVYSFGICL 262
+ + VKI DFG++R + +++ + G T + +M PE + + + DV+SFG+ L
Sbjct: 162 VGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVL 221
Query: 263 WEIYCC-DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDE 321
WEI+ P+ LS +E + Q E PR CP + +M+ CW P +R + +
Sbjct: 222 WEIFTYGKQPWYQLSNTEAIDCIT-QGRELERPRACPPEVYAIMRGCWQREPQQRHSIKD 280
Query: 322 VVSMLEAI 329
V + L+A+
Sbjct: 281 VHARLQAL 288
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 127/282 (45%), Gaps = 32/282 (11%)
Query: 44 DWEIEPSKLVIKSVIARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAF 101
W +E I + +G FG V+ R +A+K+L + + E A +
Sbjct: 1 QWALE--DFEIGRPLGKGKFGNVYLAREKQRKFILALKVL------FKAQLEKAGVEHQL 52
Query: 102 TQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYL 161
+EV + L HPN+ + G ++ +++ ++EY P G + L
Sbjct: 53 RREVEIQSHLRHPNILRLYGYFHDATRVYL----------------ILEYAPLGTVYREL 96
Query: 162 IKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARV 221
+ K + +LA LSY HS++++HRD+K EN+LL +KIADFG + V
Sbjct: 97 --QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-V 153
Query: 222 EASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVT 281
A + + T GTL Y+ PE++ G ++ K D++S G+ +E P+ ++ E
Sbjct: 154 HAPS-SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 212
Query: 282 SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
+ R P +++ R NP +RP + EV+
Sbjct: 213 KRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVL 252
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 131/293 (44%), Gaps = 45/293 (15%)
Query: 55 KSVIARGTFGTVHRG-LYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDH 113
K +I G FG V++G L DG VA+K R E + F E+ H
Sbjct: 44 KFLIGHGVFGKVYKGVLRDGAKVALK---------RRTPESSQGIEEFETEIETLSFCRH 94
Query: 114 PNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNR--RRKLAF 171
P++ IG +E+ ++ +Y+ G LK +L + +++
Sbjct: 95 PHLVSLIGFCDERNEM----------------ILIYKYMENGNLKRHLYGSDLPTMSMSW 138
Query: 172 KVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR--VEASNPNDM 229
+ +++ + ARGL YLH++ I+HRDVK+ N+LLD+N KI DFG+++ E +
Sbjct: 139 EQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLX 198
Query: 230 TGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC------DMPYPDLSFSEVT-- 281
GTLGY+ PE K DVYSFG+ L+E+ C +P ++ +E
Sbjct: 199 XVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVE 258
Query: 282 -------SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLE 327
+V NL +I + +C + + RP M +V+ LE
Sbjct: 259 SHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 131/293 (44%), Gaps = 45/293 (15%)
Query: 55 KSVIARGTFGTVHRG-LYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDH 113
K +I G FG V++G L DG VA+K R E + F E+ H
Sbjct: 44 KFLIGHGVFGKVYKGVLRDGAKVALK---------RRTPESSQGIEEFETEIETLSFCRH 94
Query: 114 PNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNR--RRKLAF 171
P++ IG +E+ ++ +Y+ G LK +L + +++
Sbjct: 95 PHLVSLIGFCDERNEM----------------ILIYKYMENGNLKRHLYGSDLPTMSMSW 138
Query: 172 KVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR--VEASNPNDM 229
+ +++ + ARGL YLH++ I+HRDVK+ N+LLD+N KI DFG+++ E +
Sbjct: 139 EQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLX 198
Query: 230 TGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC------DMPYPDLSFSEVT-- 281
GTLGY+ PE K DVYSFG+ L+E+ C +P ++ +E
Sbjct: 199 XVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVE 258
Query: 282 -------SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLE 327
+V NL +I + +C + + RP M +V+ LE
Sbjct: 259 SHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 81/161 (50%), Gaps = 3/161 (1%)
Query: 169 LAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPND 228
L + ++ + +A+G+ +L S+K +HRD+ N+LL + VKI DFG+AR +P+
Sbjct: 188 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 247
Query: 229 MTGETGT--LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDM-PYPDLSFSEVTSAVV 285
+ L +MAPE + Y + DV+SFG+ LWEI+ PYP + E +
Sbjct: 248 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 307
Query: 286 RQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSML 326
++ R P + M CW P +RP E+V L
Sbjct: 308 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 348
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 81/161 (50%), Gaps = 3/161 (1%)
Query: 169 LAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPND 228
L + ++ + +A+G+ +L S+K +HRD+ N+LL + VKI DFG+AR +P+
Sbjct: 190 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 249
Query: 229 MTGETGT--LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDM-PYPDLSFSEVTSAVV 285
+ L +MAPE + Y + DV+SFG+ LWEI+ PYP + E +
Sbjct: 250 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 309
Query: 286 RQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSML 326
++ R P + M CW P +RP E+V L
Sbjct: 310 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 350
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 81/161 (50%), Gaps = 3/161 (1%)
Query: 169 LAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPND 228
L + ++ + +A+G+ +L S+K +HRD+ N+LL + VKI DFG+AR +P+
Sbjct: 195 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 254
Query: 229 MTGETGT--LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDM-PYPDLSFSEVTSAVV 285
+ L +MAPE + Y + DV+SFG+ LWEI+ PYP + E +
Sbjct: 255 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 314
Query: 286 RQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSML 326
++ R P + M CW P +RP E+V L
Sbjct: 315 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 355
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 81/161 (50%), Gaps = 3/161 (1%)
Query: 169 LAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPND 228
L + ++ + +A+G+ +L S+K +HRD+ N+LL + VKI DFG+AR +P+
Sbjct: 197 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 256
Query: 229 MTGETGT--LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDM-PYPDLSFSEVTSAVV 285
+ L +MAPE + Y + DV+SFG+ LWEI+ PYP + E +
Sbjct: 257 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 316
Query: 286 RQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSML 326
++ R P + M CW P +RP E+V L
Sbjct: 317 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 357
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 133/277 (48%), Gaps = 36/277 (12%)
Query: 57 VIARGTFGTVHRGLY--DGHDV----AVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHK 110
V+ G FGTV++G++ DG +V A+K+L E +A L A+ V
Sbjct: 24 VLGSGAFGTVYKGIWIPDGENVKIPVAIKVL---RENTSPKANKEILDEAY-----VMAG 75
Query: 111 LDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLA 170
+ P V++ +G + S+ +V + +P G L ++ +NR R L
Sbjct: 76 VGSPYVSRLLGICLTST-----------------VQLVTQLMPYGCLLDHVRENRGR-LG 117
Query: 171 FKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMT 230
+ ++ + +A+G+SYL ++VHRD+ N+L+ VKI DFG+AR+ + +
Sbjct: 118 SQDLLNWCMQIAKGMSYLEDVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYH 177
Query: 231 GETGT--LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDM-PYPDLSFSEVTSAVVRQ 287
+ G + +MA E + + + DV+S+G+ +WE+ PY + E+ + +
Sbjct: 178 ADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKG 237
Query: 288 NLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVS 324
P+ P C + +M +CW + + RP E+VS
Sbjct: 238 ERLPQ-PPICTIDVYMIMVKCWMIDSECRPRFRELVS 273
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 130/299 (43%), Gaps = 67/299 (22%)
Query: 58 IARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHK--LDHPN 115
I +G +G V G + G VAVK+ EE +++ +E ++ + H N
Sbjct: 45 IGKGRYGEVWMGKWRGEKVAVKVFFTTEE------------ASWFRETEIYQTVLMRHEN 92
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVV 175
+ FI A + + Q ++ +Y G+L YL + L K ++
Sbjct: 93 ILGFIAADIKGTGSWTQ------------LYLITDYHENGSLYDYL---KSTTLDAKSML 137
Query: 176 QLALDLARGLSYLHSQ--------KIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPN 227
+LA GL +LH++ I HRD+K++N+L+ KN T IAD G+A S+ N
Sbjct: 138 KLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTN 197
Query: 228 DM----TGETGTLGYMAPEV----LNGNPYNR--KCDVYSFGICLWEIY--CCD------ 269
++ GT YM PEV LN N + D+YSFG+ LWE+ C
Sbjct: 198 EVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEE 257
Query: 270 --MPYPDL-----SFSEVTSAVVRQNLRPEIPRC-----CPSSLANVMKRCWDANPDKR 316
+PY DL S+ ++ V + LRP P C + +M CW NP R
Sbjct: 258 YQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASR 316
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 128/284 (45%), Gaps = 32/284 (11%)
Query: 42 RQDWEIEPSKLVIKSVIARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRS 99
++ W +E I + +G FG V+ R +A+K+L +T+ E A +
Sbjct: 6 KRQWTLE--DFDIGRPLGKGKFGNVYLARERQSKFILALKVL------FKTQLEKAGVEH 57
Query: 100 AFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKT 159
+EV + L HPN+ + G ++ +++ ++EY P G +
Sbjct: 58 QLRREVEIQSHLRHPNILRLYGYFHDATRVYL----------------ILEYAPLGTVYR 101
Query: 160 YLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVA 219
L K R + +LA LSY HS++++HRD+K EN+LL N +KIADFG +
Sbjct: 102 ELQKLSR--FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWS 159
Query: 220 RVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSE 279
V A + T GTL Y+ PE++ G ++ K D++S G+ +E P+ ++ E
Sbjct: 160 -VHAPSSRRTT-LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQE 217
Query: 280 VTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
+ R P +++ R N +R + EV+
Sbjct: 218 TYRRISRVEF--TFPDFVTEGARDLISRLLKHNASQRLTLAEVL 259
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 121/231 (52%), Gaps = 25/231 (10%)
Query: 96 ALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGG 155
A+R+ +E+ V H+ + P + F GA E+ +IC +E++ GG
Sbjct: 49 AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEI-------------SIC---MEHMDGG 92
Query: 156 ALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQ-KIVHRDVKTENMLLDKNRTVKIA 214
+L L K R + +++ ++++ + +GL+YL + KI+HRDVK N+L++ +K+
Sbjct: 93 SLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLC 150
Query: 215 DFGVARVEASNPNDMTGE-TGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
DFGV+ ++M E GT YM+PE L G Y+ + D++S G+ L E+ P P
Sbjct: 151 DFGVS---GQLIDEMANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPRP 207
Query: 274 DLSFSEVTSAVVRQNLRPEIPRCCPS-SLANVMKRCWDANPDKRPEMDEVV 323
++ E+ +V + P++P S + + +C NP +R ++ +++
Sbjct: 208 PMAIFELLDYIVNEP-PPKLPSAVFSLEFQDFVNKCLIKNPAERADLKQLM 257
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 122/258 (47%), Gaps = 33/258 (12%)
Query: 54 IKSVIARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQ-EVAVWHK 110
I + G+FG VH R ++G A+K+L + E + + T E +
Sbjct: 10 ILRTLGTGSFGRVHLIRSRHNGRYYAMKVL-------KKEIVVRLKQVEHTNDERLMLSI 62
Query: 111 LDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLA 170
+ HP + + G + ++ ++++Y+ GG L + L K++R
Sbjct: 63 VTHPFIIRMWGTFQDAQQI----------------FMIMDYIEGGELFSLLRKSQR--FP 104
Query: 171 FKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMT 230
V A ++ L YLHS+ I++RD+K EN+LLDKN +KI DFG A+ P+
Sbjct: 105 NPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYV---PDVTY 161
Query: 231 GETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLR 290
GT Y+APEV++ PYN+ D +SFGI ++E+ P+ D + + ++ LR
Sbjct: 162 XLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELR 221
Query: 291 PEIPRCCPSSLANVMKRC 308
P + +++ R
Sbjct: 222 --FPPFFNEDVKDLLSRL 237
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 59 ARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPNVTK 118
G FG V++G + VAVK L + L+ F QE+ V K H N+ +
Sbjct: 31 GEGGFGVVYKGYVNNTTVAVKKL-----AAMVDITTEELKQQFDQEIKVXAKCQHENLVE 85
Query: 119 FIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYL-IKNRRRKLAFKVVVQL 177
+G + +L C+V Y P G+L L + L++ ++
Sbjct: 86 LLGFSSDGDDL----------------CLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKI 129
Query: 178 ALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGE--TGT 235
A A G+++LH +HRD+K+ N+LLD+ T KI+DFG+AR + GT
Sbjct: 130 AQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGT 189
Query: 236 LGYMAPEVLNGNPYNRKCDVYSFGICLWEI 265
Y APE L G K D+YSFG+ L EI
Sbjct: 190 TAYXAPEALRGE-ITPKSDIYSFGVVLLEI 218
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 126/270 (46%), Gaps = 30/270 (11%)
Query: 58 IARGTFG--TVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPN 115
I G+FG + + DG +K ++ + R +EVAV + HPN
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKE-------REESRREVAVLANMKHPN 84
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFK--V 173
+ ++ + ENG + +V++Y GG L + N ++ + F+
Sbjct: 85 IVQYRESF---------EENGSLY-------IVMDYCEGGDLFKRI--NAQKGVLFQEDQ 126
Query: 174 VVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGET 233
++ + + L ++H +KI+HRD+K++N+ L K+ TV++ DFG+ARV S
Sbjct: 127 ILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACI 186
Query: 234 GTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEI 293
GT Y++PE+ PYN K D+++ G L+E+ + S + ++ + P +
Sbjct: 187 GTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSF-PPV 245
Query: 294 PRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
L +++ + + NP RP ++ ++
Sbjct: 246 SLHYSYDLRSLVSQLFKRNPRDRPSVNSIL 275
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 130/277 (46%), Gaps = 39/277 (14%)
Query: 54 IKSVIARGTFGTVHRGLYD--GHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKL 111
I + G+FG V + G VA+K+++ + + ++ +E++ L
Sbjct: 18 IVKTLGEGSFGKVKLAYHTTTGQKVALKIIN------KKVLAKSDMQGRIEREISYLRLL 71
Query: 112 DHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAF 171
HP++ K E+ +V+EY G L Y+++ R K++
Sbjct: 72 RHPHIIKLYDVIKSKDEI----------------IMVIEY-AGNELFDYIVQ--RDKMSE 112
Query: 172 KVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTG 231
+ + + + Y H KIVHRD+K EN+LLD++ VKIADFG++ + ++ N +
Sbjct: 113 QEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNI-MTDGNFLKT 171
Query: 232 ETGTLGYMAPEVLNGNPY-NRKCDVYSFGICLWEIYCCDMPYPDLS----FSEVTSAVVR 286
G+ Y APEV++G Y + DV+S G+ L+ + C +P+ D S F +++ V
Sbjct: 172 SCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVY- 230
Query: 287 QNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
+P+ A ++KR NP R + E++
Sbjct: 231 -----TLPKFLSPGAAGLIKRMLIVNPLNRISIHEIM 262
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 130/277 (46%), Gaps = 39/277 (14%)
Query: 54 IKSVIARGTFGTVHRGLYD--GHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKL 111
I + G+FG V + G VA+K+++ + + ++ +E++ L
Sbjct: 17 IVKTLGEGSFGKVKLAYHTTTGQKVALKIIN------KKVLAKSDMQGRIEREISYLRLL 70
Query: 112 DHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAF 171
HP++ K E+ +V+EY G L Y+++ R K++
Sbjct: 71 RHPHIIKLYDVIKSKDEI----------------IMVIEY-AGNELFDYIVQ--RDKMSE 111
Query: 172 KVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTG 231
+ + + + Y H KIVHRD+K EN+LLD++ VKIADFG++ + ++ N +
Sbjct: 112 QEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNI-MTDGNFLKT 170
Query: 232 ETGTLGYMAPEVLNGNPY-NRKCDVYSFGICLWEIYCCDMPYPDLS----FSEVTSAVVR 286
G+ Y APEV++G Y + DV+S G+ L+ + C +P+ D S F +++ V
Sbjct: 171 SCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVY- 229
Query: 287 QNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
+P+ A ++KR NP R + E++
Sbjct: 230 -----TLPKFLSPGAAGLIKRMLIVNPLNRISIHEIM 261
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 130/277 (46%), Gaps = 39/277 (14%)
Query: 54 IKSVIARGTFGTVHRGLYD--GHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKL 111
I + G+FG V + G VA+K+++ + + ++ +E++ L
Sbjct: 8 IVKTLGEGSFGKVKLAYHTTTGQKVALKIIN------KKVLAKSDMQGRIEREISYLRLL 61
Query: 112 DHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAF 171
HP++ K E+ +V+EY G L Y+++ R K++
Sbjct: 62 RHPHIIKLYDVIKSKDEI----------------IMVIEY-AGNELFDYIVQ--RDKMSE 102
Query: 172 KVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTG 231
+ + + + Y H KIVHRD+K EN+LLD++ VKIADFG++ + ++ N +
Sbjct: 103 QEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNI-MTDGNFLKT 161
Query: 232 ETGTLGYMAPEVLNGNPY-NRKCDVYSFGICLWEIYCCDMPYPDLS----FSEVTSAVVR 286
G+ Y APEV++G Y + DV+S G+ L+ + C +P+ D S F +++ V
Sbjct: 162 SCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVY- 220
Query: 287 QNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
+P+ A ++KR NP R + E++
Sbjct: 221 -----TLPKFLSPGAAGLIKRMLIVNPLNRISIHEIM 252
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 130/277 (46%), Gaps = 39/277 (14%)
Query: 54 IKSVIARGTFGTVHRGLYD--GHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKL 111
I + G+FG V + G VA+K+++ + + ++ +E++ L
Sbjct: 12 IVKTLGEGSFGKVKLAYHTTTGQKVALKIIN------KKVLAKSDMQGRIEREISYLRLL 65
Query: 112 DHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAF 171
HP++ K E+ +V+EY G L Y+++ R K++
Sbjct: 66 RHPHIIKLYDVIKSKDEI----------------IMVIEY-AGNELFDYIVQ--RDKMSE 106
Query: 172 KVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTG 231
+ + + + Y H KIVHRD+K EN+LLD++ VKIADFG++ + ++ N +
Sbjct: 107 QEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNI-MTDGNFLKT 165
Query: 232 ETGTLGYMAPEVLNGNPY-NRKCDVYSFGICLWEIYCCDMPYPDLS----FSEVTSAVVR 286
G+ Y APEV++G Y + DV+S G+ L+ + C +P+ D S F +++ V
Sbjct: 166 SCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVY- 224
Query: 287 QNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
+P+ A ++KR NP R + E++
Sbjct: 225 -----TLPKFLSPGAAGLIKRMLIVNPLNRISIHEIM 256
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 132/289 (45%), Gaps = 40/289 (13%)
Query: 42 RQDWEIEPSKLVIKSVIARGTFGTVHRGLYD--GHDVAVKLLDWGEEGHRTEAEIAALRS 99
+ D ++ V+ + GTFG V G + GH VAVK+L+ R + +
Sbjct: 3 KHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILN------RQKIRSLDVVG 56
Query: 100 AFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKT 159
+E+ HP++ K ++ P++ +V+EY+ GG L
Sbjct: 57 KIKREIQNLKLFRHPHIIKLYQV---------------ISTPTDFF-MVMEYVSGGELFD 100
Query: 160 YLIKNRR-RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGV 218
Y+ K+ R ++ + + Q L + Y H +VHRD+K EN+LLD + KIADFG+
Sbjct: 101 YICKHGRVEEMEARRLFQQILS---AVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGL 157
Query: 219 ARVEASNPNDMTGETGTLGYMAPEVLNGNPY-NRKCDVYSFGICLWEIYCCDMPYPD--- 274
+ + S+ + G+ Y APEV++G Y + D++S G+ L+ + C +P+ D
Sbjct: 158 SNM-MSDGEFLRDSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV 216
Query: 275 -LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 322
F ++ V IP S+A ++ +P KR + ++
Sbjct: 217 PTLFKKIRGGVFY------IPEYLNRSVATLLMHMLQVDPLKRATIKDI 259
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 89/172 (51%), Gaps = 5/172 (2%)
Query: 146 CVVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQK-IVHRDVKTENML 204
C V+EY GG L +L +R R + ++ L YLHS+K +V+RD+K EN++
Sbjct: 224 CFVMEYANGGELFFHL--SRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLM 281
Query: 205 LDKNRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWE 264
LDK+ +KI DFG+ + + M GT Y+APEVL N Y R D + G+ ++E
Sbjct: 282 LDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE 341
Query: 265 IYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
+ C +P+ + ++ ++ + +R PR +++ +P +R
Sbjct: 342 MMCGRLPFYNQDHEKLFELILMEEIR--FPRTLGPEAKSLLSGLLKKDPKQR 391
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 89/172 (51%), Gaps = 5/172 (2%)
Query: 146 CVVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQK-IVHRDVKTENML 204
C V+EY GG L +L +R R + ++ L YLHS+K +V+RD+K EN++
Sbjct: 227 CFVMEYANGGELFFHL--SRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLM 284
Query: 205 LDKNRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWE 264
LDK+ +KI DFG+ + + M GT Y+APEVL N Y R D + G+ ++E
Sbjct: 285 LDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE 344
Query: 265 IYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
+ C +P+ + ++ ++ + +R PR +++ +P +R
Sbjct: 345 MMCGRLPFYNQDHEKLFELILMEEIR--FPRTLGPEAKSLLSGLLKKDPKQR 394
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 132/289 (45%), Gaps = 40/289 (13%)
Query: 42 RQDWEIEPSKLVIKSVIARGTFGTVHRGLYD--GHDVAVKLLDWGEEGHRTEAEIAALRS 99
+ D ++ V+ + GTFG V G + GH VAVK+L+ R + +
Sbjct: 3 KHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILN------RQKIRSLDVVG 56
Query: 100 AFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKT 159
+E+ HP++ K ++ P++ +V+EY+ GG L
Sbjct: 57 KIKREIQNLKLFRHPHIIKLYQV---------------ISTPTDFF-MVMEYVSGGELFD 100
Query: 160 YLIKNRR-RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGV 218
Y+ K+ R ++ + + Q L + Y H +VHRD+K EN+LLD + KIADFG+
Sbjct: 101 YICKHGRVEEMEARRLFQQILS---AVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGL 157
Query: 219 ARVEASNPNDMTGETGTLGYMAPEVLNGNPY-NRKCDVYSFGICLWEIYCCDMPYPD--- 274
+ + S+ + G+ Y APEV++G Y + D++S G+ L+ + C +P+ D
Sbjct: 158 SNM-MSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV 216
Query: 275 -LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 322
F ++ V IP S+A ++ +P KR + ++
Sbjct: 217 PTLFKKIRGGVFY------IPEYLNRSVATLLMHMLQVDPLKRATIKDI 259
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 89/172 (51%), Gaps = 5/172 (2%)
Query: 146 CVVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQK-IVHRDVKTENML 204
C V+EY GG L +L +R R + ++ L YLHS+K +V+RD+K EN++
Sbjct: 86 CFVMEYANGGELFFHL--SRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLM 143
Query: 205 LDKNRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWE 264
LDK+ +KI DFG+ + + M GT Y+APEVL N Y R D + G+ ++E
Sbjct: 144 LDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE 203
Query: 265 IYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
+ C +P+ + ++ ++ + +R PR +++ +P +R
Sbjct: 204 MMCGRLPFYNQDHEKLFELILMEEIR--FPRTLGPEAKSLLSGLLKKDPKQR 253
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 89/172 (51%), Gaps = 5/172 (2%)
Query: 146 CVVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQK-IVHRDVKTENML 204
C V+EY GG L +L +R R + ++ L YLHS+K +V+RD+K EN++
Sbjct: 84 CFVMEYANGGELFFHL--SRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLM 141
Query: 205 LDKNRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWE 264
LDK+ +KI DFG+ + + M GT Y+APEVL N Y R D + G+ ++E
Sbjct: 142 LDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE 201
Query: 265 IYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
+ C +P+ + ++ ++ + +R PR +++ +P +R
Sbjct: 202 MMCGRLPFYNQDHEKLFELILMEEIR--FPRTLGPEAKSLLSGLLKKDPKQR 251
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 89/172 (51%), Gaps = 5/172 (2%)
Query: 146 CVVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQK-IVHRDVKTENML 204
C V+EY GG L +L +R R + ++ L YLHS+K +V+RD+K EN++
Sbjct: 85 CFVMEYANGGELFFHL--SRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLM 142
Query: 205 LDKNRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWE 264
LDK+ +KI DFG+ + + M GT Y+APEVL N Y R D + G+ ++E
Sbjct: 143 LDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE 202
Query: 265 IYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
+ C +P+ + ++ ++ + +R PR +++ +P +R
Sbjct: 203 MMCGRLPFYNQDHEKLFELILMEEIR--FPRTLGPEAKSLLSGLLKKDPKQR 252
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 88/170 (51%), Gaps = 4/170 (2%)
Query: 147 VVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLD 206
V+EYL GG L ++ + L+ A ++ GL +LHS+ IV+RD+K +N+LLD
Sbjct: 95 FVMEYLNGGDLMYHIQSCHKFDLSRATFY--AAEIILGLQFLHSKGIVYRDLKLDNILLD 152
Query: 207 KNRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIY 266
K+ +KIADFG+ + GT Y+APE+L G YN D +SFG+ L+E+
Sbjct: 153 KDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEML 212
Query: 267 CCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
P+ E+ ++ N P PR +++ + + P+KR
Sbjct: 213 IGQSPFHGQDEEELFHSIRMDN--PFYPRWLEKEAKDLLVKLFVREPEKR 260
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 133/280 (47%), Gaps = 42/280 (15%)
Query: 54 IKSVIARGTFGTVHRG--LYDGHDVAVKLLD---WGEEGHRTEAEIAALRSAFTQEVA-V 107
+ I G F V + G VA+K++D G + R + EI AL++ Q + +
Sbjct: 14 LHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQL 73
Query: 108 WHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLI-KNRR 166
+H L+ +N +V+EY PGG L Y+I ++R
Sbjct: 74 YHVLE----------------------------TANKIFMVLEYCPGGELFDYIISQDRL 105
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGV-ARVEASN 225
+ +VV + + ++Y+HSQ HRD+K EN+L D+ +K+ DFG+ A+ + +
Sbjct: 106 SEEETRVVFR---QIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNK 162
Query: 226 PNDMTGETGTLGYMAPEVLNGNPY-NRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAV 284
+ G+L Y APE++ G Y + DV+S GI L+ + C +P+ D + + +
Sbjct: 163 DYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKI 222
Query: 285 VRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVS 324
+R + ++P+ S ++++ +P KR M +++
Sbjct: 223 MRG--KYDVPKWLSPSSILLLQQMLQVDPKKRISMKNLLN 260
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 88/170 (51%), Gaps = 4/170 (2%)
Query: 147 VVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLD 206
V+EYL GG L ++ + L+ A ++ GL +LHS+ IV+RD+K +N+LLD
Sbjct: 96 FVMEYLNGGDLMYHIQSCHKFDLSRATFY--AAEIILGLQFLHSKGIVYRDLKLDNILLD 153
Query: 207 KNRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIY 266
K+ +KIADFG+ + GT Y+APE+L G YN D +SFG+ L+E+
Sbjct: 154 KDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEML 213
Query: 267 CCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
P+ E+ ++ N P PR +++ + + P+KR
Sbjct: 214 IGQSPFHGQDEEELFHSIRMDN--PFYPRWLEKEAKDLLVKLFVREPEKR 261
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 131/298 (43%), Gaps = 48/298 (16%)
Query: 55 KSVIARGTFGTVHRG-LYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDH 113
K+++ RG FG V++G L DG VAVK L E F EV + H
Sbjct: 43 KNILGRGGFGKVYKGRLADGTLVAVKRL--------KEERXQGGELQFQTEVEMISMAVH 94
Query: 114 PNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRK--LAF 171
N+ + G M +E +V Y+ G++ + L + + L +
Sbjct: 95 RNLLRLRGFCMTPTE----------------RLLVYPYMANGSVASCLRERPESQPPLDW 138
Query: 172 KVVVQLALDLARGLSYLHSQ---KIVHRDVKTENMLLDKNRTVKIADFGVARV-EASNPN 227
++AL ARGL+YLH KI+HRDVK N+LLD+ + DFG+A++ + + +
Sbjct: 139 PKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXH 198
Query: 228 DMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPY--------------- 272
GT+G++APE L+ + K DV+ +G+ L E+ +
Sbjct: 199 VXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLD 258
Query: 273 --PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEA 328
L + A+V +L+ L V C ++P +RP+M EVV MLE
Sbjct: 259 WVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 316
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 109/241 (45%), Gaps = 47/241 (19%)
Query: 30 PIGKASNFLKKQRQDWEIEPSKLVIKSVIARGTFGTVH--RGLYDGHDVAVKLLDWGEEG 87
P+G NF K ++ I GT+G V+ R G VA+K +
Sbjct: 1 PLGSMENFQKVEK---------------IGEGTYGVVYKARNKLTGEVVALKKI------ 39
Query: 88 HRTEAEIAALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCV 147
R + E + S +E+++ +L+HPN+ K + ++L++ E + + +
Sbjct: 40 -RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDAS 98
Query: 148 VVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDK 207
+ +P +K+YL + L +GL++ HS +++HRD+K EN+L++
Sbjct: 99 ALTGIPLPLIKSYLFQ-----------------LLQGLAFCHSHRVLHRDLKPENLLINT 141
Query: 208 NRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYC 267
+K+ADFG+AR E TL Y APE+L G C YS + +W + C
Sbjct: 142 EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG------CKYYSTAVDIWSLGC 195
Query: 268 C 268
Sbjct: 196 I 196
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 103/213 (48%), Gaps = 32/213 (15%)
Query: 58 IARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPN 115
I GT+G V+ R G VA+K + R + E + S +E+++ +L+HPN
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKELNHPN 62
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVV 175
+ K + ++L++ E+ + + + + +P +K+YL +
Sbjct: 63 IVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQ------------ 110
Query: 176 QLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETGT 235
L +GL++ HS +++HRD+K +N+L++ +K+ADFG+AR T E T
Sbjct: 111 -----LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT 165
Query: 236 LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC 268
L Y APE+L G C YS + +W + C
Sbjct: 166 LWYRAPEILLG------CKYYSTAVDIWSLGCI 192
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 120/245 (48%), Gaps = 33/245 (13%)
Query: 57 VIARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHP 114
V+ +G+FG V + G + AVK++ + +T+ E + +EV + +LDHP
Sbjct: 56 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKE------SLLREVQLLKQLDHP 109
Query: 115 NVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVV 174
N+ K + +V E GG L +I R++ +
Sbjct: 110 NIMKLY----------------EFFEDKGYFYLVGEVYTGGELFDEIIS--RKRFSEVDA 151
Query: 175 VQLALDLARGLSYLHSQKIVHRDVKTENMLLD---KNRTVKIADFGVA-RVEASNPNDMT 230
++ + G++Y+H KIVHRD+K EN+LL+ K+ ++I DFG++ EAS M
Sbjct: 152 ARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK--MK 209
Query: 231 GETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLR 290
+ GT Y+APEVL+G Y+ KCDV+S G+ L+ + P+ + ++ V +
Sbjct: 210 DKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYT 268
Query: 291 PEIPR 295
E+P+
Sbjct: 269 FELPQ 273
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 136/322 (42%), Gaps = 67/322 (20%)
Query: 51 KLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHK 110
++ + + +G +G V RGL+ G VAVK+ +E ++ +E +++
Sbjct: 9 QVALVECVGKGRYGEVWRGLWHGESVAVKIFSSRDE------------QSWFRETEIYNT 56
Query: 111 --LDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRK 168
L H N+ FI + M S Q ++ Y G+L +L +R+
Sbjct: 57 VLLRHDNILGFIASDMTSRNSSTQ------------LWLITHYHEHGSLYDFL---QRQT 101
Query: 169 LAFKVVVQLALDLARGLSYLHSQ--------KIVHRDVKTENMLLDKNRTVKIADFGVAR 220
L + ++LA+ A GL++LH + I HRD K+ N+L+ N IAD G+A
Sbjct: 102 LEPHLALRLAVSAACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAV 161
Query: 221 VEASNPNDM----TGETGTLGYMAPEVLNGNPYN------RKCDVYSFGICLWEIYCCDM 270
+ + + + GT YMAPEVL+ + D+++FG+ LWEI +
Sbjct: 162 MHSQGSDYLDIGNNPRVGTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEIARRTI 221
Query: 271 ----------PYPDL-----SFSEVTSAVVRQNLRPEIPRCCP-----SSLANVMKRCWD 310
P+ D+ SF ++ V P IP S LA +M+ CW
Sbjct: 222 VNGIVEDYRPPFYDVVPNDPSFEDMKKVVCVDQQTPTIPNRLAADPVLSGLAQMMRECWY 281
Query: 311 ANPDKRPEMDEVVSMLEAIDTS 332
NP R + L+ I S
Sbjct: 282 PNPSARLTALRIKKTLQKISNS 303
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 120/245 (48%), Gaps = 33/245 (13%)
Query: 57 VIARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHP 114
V+ +G+FG V + G + AVK++ + +T+ E + +EV + +LDHP
Sbjct: 57 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKE------SLLREVQLLKQLDHP 110
Query: 115 NVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVV 174
N+ K + +V E GG L +I R++ +
Sbjct: 111 NIMKLY----------------EFFEDKGYFYLVGEVYTGGELFDEIIS--RKRFSEVDA 152
Query: 175 VQLALDLARGLSYLHSQKIVHRDVKTENMLLD---KNRTVKIADFGVA-RVEASNPNDMT 230
++ + G++Y+H KIVHRD+K EN+LL+ K+ ++I DFG++ EAS M
Sbjct: 153 ARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK--MK 210
Query: 231 GETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLR 290
+ GT Y+APEVL+G Y+ KCDV+S G+ L+ + P+ + ++ V +
Sbjct: 211 DKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYT 269
Query: 291 PEIPR 295
E+P+
Sbjct: 270 FELPQ 274
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 120/245 (48%), Gaps = 33/245 (13%)
Query: 57 VIARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHP 114
V+ +G+FG V + G + AVK++ + +T+ E + +EV + +LDHP
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKE------SLLREVQLLKQLDHP 86
Query: 115 NVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVV 174
N+ K + +V E GG L +I R++ +
Sbjct: 87 NIMKLY----------------EFFEDKGYFYLVGEVYTGGELFDEIIS--RKRFSEVDA 128
Query: 175 VQLALDLARGLSYLHSQKIVHRDVKTENMLLD---KNRTVKIADFGVA-RVEASNPNDMT 230
++ + G++Y+H KIVHRD+K EN+LL+ K+ ++I DFG++ EAS M
Sbjct: 129 ARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK--MK 186
Query: 231 GETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLR 290
+ GT Y+APEVL+G Y+ KCDV+S G+ L+ + P+ + ++ V +
Sbjct: 187 DKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYT 245
Query: 291 PEIPR 295
E+P+
Sbjct: 246 FELPQ 250
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 101/213 (47%), Gaps = 32/213 (15%)
Query: 58 IARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPN 115
I GT+G V+ R G VA+K + R + E + S +E+++ +L+HPN
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKELNHPN 63
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVV 175
+ K + ++L++ E + + + +P +K+YL +
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ------------ 111
Query: 176 QLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETGT 235
L +GLS+ HS +++HRD+K +N+L++ +K+ADFG+AR T E T
Sbjct: 112 -----LLQGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT 166
Query: 236 LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC 268
L Y APE+L G C YS + +W + C
Sbjct: 167 LWYRAPEILLG------CKYYSTAVDIWSLGCI 193
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 107/221 (48%), Gaps = 32/221 (14%)
Query: 57 VIARGTFGTVHR--GLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHP 114
++ +G+FG V + + AVK+++ ++ + I +EV + KLDHP
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTIL-------REVELLKKLDHP 81
Query: 115 NVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVV 174
N+ K SS +I V E GG L +IK R++ +
Sbjct: 82 NIMKLFEILEDSSSFYI----------------VGELYTGGELFDEIIK--RKRFSEHDA 123
Query: 175 VQLALDLARGLSYLHSQKIVHRDVKTENMLL---DKNRTVKIADFGVARVEASNPNDMTG 231
++ + G++Y+H IVHRD+K EN+LL +K+ +KI DFG++ N M
Sbjct: 124 ARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK-MKD 182
Query: 232 ETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPY 272
GT Y+APEVL G Y+ KCDV+S G+ L+ + P+
Sbjct: 183 RIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPF 222
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 130/298 (43%), Gaps = 48/298 (16%)
Query: 55 KSVIARGTFGTVHRG-LYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDH 113
K+++ RG FG V++G L DG VAVK L E F EV + H
Sbjct: 35 KNILGRGGFGKVYKGRLADGXLVAVKRL--------KEERTQGGELQFQTEVEMISMAVH 86
Query: 114 PNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRK--LAF 171
N+ + G M +E +V Y+ G++ + L + + L +
Sbjct: 87 RNLLRLRGFCMTPTE----------------RLLVYPYMANGSVASCLRERPESQPPLDW 130
Query: 172 KVVVQLALDLARGLSYLHSQ---KIVHRDVKTENMLLDKNRTVKIADFGVARV-EASNPN 227
++AL ARGL+YLH KI+HRDVK N+LLD+ + DFG+A++ + + +
Sbjct: 131 PKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXH 190
Query: 228 DMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPY--------------- 272
G +G++APE L+ + K DV+ +G+ L E+ +
Sbjct: 191 VXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLD 250
Query: 273 --PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEA 328
L + A+V +L+ L V C ++P +RP+M EVV MLE
Sbjct: 251 WVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 120/245 (48%), Gaps = 33/245 (13%)
Query: 57 VIARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHP 114
V+ +G+FG V + G + AVK++ + +T+ E + +EV + +LDHP
Sbjct: 39 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKE------SLLREVQLLKQLDHP 92
Query: 115 NVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVV 174
N+ K + +V E GG L +I R++ +
Sbjct: 93 NIMKLY----------------EFFEDKGYFYLVGEVYTGGELFDEIIS--RKRFSEVDA 134
Query: 175 VQLALDLARGLSYLHSQKIVHRDVKTENMLLD---KNRTVKIADFGVA-RVEASNPNDMT 230
++ + G++Y+H KIVHRD+K EN+LL+ K+ ++I DFG++ EAS M
Sbjct: 135 ARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK--MK 192
Query: 231 GETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLR 290
+ GT Y+APEVL+G Y+ KCDV+S G+ L+ + P+ + ++ V +
Sbjct: 193 DKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYT 251
Query: 291 PEIPR 295
E+P+
Sbjct: 252 FELPQ 256
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 123/270 (45%), Gaps = 40/270 (14%)
Query: 58 IARGTFGTVHRGLYDGHDV--AVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPN 115
+ G FG V++ V A K++D ++E E+ + E+ + DHPN
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVID-----TKSEEEL----EDYMVEIDILASCDHPN 95
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRR--RKLAFKV 173
+ K + A + L I ++E+ GGA+ +++ R + +V
Sbjct: 96 IVKLLDAFYYENNLWI----------------LIEFCAGGAVDAVMLELERPLTESQIQV 139
Query: 174 VVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGET 233
V + LD L+YLH KI+HRD+K N+L + +K+ADFGV+
Sbjct: 140 VCKQTLD---ALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI 196
Query: 234 GTLGYMAPEVL-----NGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQN 288
GT +MAPEV+ PY+ K DV+S GI L E+ + P+ +L+ V + +
Sbjct: 197 GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSE 256
Query: 289 LRPEI--PRCCPSSLANVMKRCWDANPDKR 316
P + P S+ + +K+C + N D R
Sbjct: 257 -PPTLAQPSRWSSNFKDFLKKCLEKNVDAR 285
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 126/284 (44%), Gaps = 42/284 (14%)
Query: 52 LVIKSVIARGTFGTVH--RGLYDGHDVAVKLLDWGEEG---HRTEAEIAALRSAFTQEVA 106
+ K + G FG VH G + +K ++ + EAEI L+S
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKS------- 76
Query: 107 VWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLI--KN 164
LDHPN+ K ++I V+E GG L ++ +
Sbjct: 77 ----LDHPNIIKIFEVFEDYHNMYI----------------VMETCEGGELLERIVSAQA 116
Query: 165 RRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDK---NRTVKIADFGVARV 221
R + L+ V +L + L+Y HSQ +VH+D+K EN+L + +KI DFG+A +
Sbjct: 117 RGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAEL 176
Query: 222 EASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVT 281
S+ + T GT YMAPEV + KCD++S G+ ++ + +P+ S EV
Sbjct: 177 FKSDEHS-TNAAGTALYMAPEVFKRD-VTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQ 234
Query: 282 SAVVRQ--NLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
+ N E P ++ +++K+ +P++RP +V+
Sbjct: 235 QKATYKEPNYAVECRPLTPQAV-DLLKQMLTKDPERRPSAAQVL 277
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 128/277 (46%), Gaps = 38/277 (13%)
Query: 48 EPSKLVIKSVIARGTFGTVH--RGLY---DGHDVAVKLLDWGEEGHRTEAEIAALRSAFT 102
+PS + V+ +G+FG V R + GH A+K+L R R
Sbjct: 26 DPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILA 85
Query: 103 QEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLI 162
++HP V K A QTE +++++L GG L T L
Sbjct: 86 D-------VNHPFVVKLHYA--------FQTEGK--------LYLILDFLRGGDLFTRLS 122
Query: 163 KNRRRKLAFK---VVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVA 219
K ++ F V LA +LA GL +LHS I++RD+K EN+LLD+ +K+ DFG++
Sbjct: 123 K----EVMFTEEDVKFYLA-ELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS 177
Query: 220 RVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSE 279
+ + GT+ YMAPEV+N ++ D +S+G+ ++E+ +P+ E
Sbjct: 178 KEAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKE 237
Query: 280 VTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
+ +++ L +P+ + ++++ + NP R
Sbjct: 238 TMTLILKAKL--GMPQFLSTEAQSLLRALFKRNPANR 272
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 109/241 (45%), Gaps = 47/241 (19%)
Query: 30 PIGKASNFLKKQRQDWEIEPSKLVIKSVIARGTFGTVH--RGLYDGHDVAVKLLDWGEEG 87
P+G NF K ++ I GT+G V+ R G VA+K +
Sbjct: 1 PLGSMENFQKVEK---------------IGEGTYGVVYKARNKLTGEVVALKKI------ 39
Query: 88 HRTEAEIAALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCV 147
R + E + S +E+++ +L+HPN+ K + ++L++ E + + +
Sbjct: 40 -RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDAS 98
Query: 148 VVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDK 207
+ +P +K+YL + L +GL++ HS +++HRD+K +N+L++
Sbjct: 99 ALTGIPLPLIKSYLFQ-----------------LLQGLAFCHSHRVLHRDLKPQNLLINT 141
Query: 208 NRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYC 267
+K+ADFG+AR E TL Y APE+L G C YS + +W + C
Sbjct: 142 EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG------CKYYSTAVDIWSLGC 195
Query: 268 C 268
Sbjct: 196 I 196
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 101/222 (45%), Gaps = 26/222 (11%)
Query: 101 FTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTY 160
F +EV +L H N+ I V + +V+EY+ G L Y
Sbjct: 58 FEREVHNSSQLSHQNIVSMI----------------DVDEEDDCYYLVMEYIEGPTLSEY 101
Query: 161 LIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR 220
+ L+ + + G+ + H +IVHRD+K +N+L+D N+T+KI DFG+A+
Sbjct: 102 I--ESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAK 159
Query: 221 VEASNPNDMTGET-GTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYP-----D 274
+ T GT+ Y +PE G + D+YS GI L+E+ + P+
Sbjct: 160 ALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVS 219
Query: 275 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
++ + +V N+ ++ + P SL+NV+ R + + R
Sbjct: 220 IAIKHIQDSV--PNVTTDVRKDIPQSLSNVILRATEKDKANR 259
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 101/213 (47%), Gaps = 32/213 (15%)
Query: 58 IARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPN 115
I GT+G V+ R G VA+K + R + E + S +E+++ +L+HPN
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKELNHPN 67
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVV 175
+ K + ++L++ E + + + +P +K+YL +
Sbjct: 68 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ------------ 115
Query: 176 QLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETGT 235
L +GL++ HS +++HRD+K +N+L++ +K+ADFG+AR T E T
Sbjct: 116 -----LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT 170
Query: 236 LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC 268
L Y APE+L G C YS + +W + C
Sbjct: 171 LWYRAPEILLG------CKYYSTAVDIWSLGCI 197
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 123/270 (45%), Gaps = 40/270 (14%)
Query: 58 IARGTFGTVHRGLYDGHDV--AVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPN 115
+ G FG V++ V A K++D ++E E+ + E+ + DHPN
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVID-----TKSEEEL----EDYMVEIDILASCDHPN 95
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRR--RKLAFKV 173
+ K + A + L I ++E+ GGA+ +++ R + +V
Sbjct: 96 IVKLLDAFYYENNLWI----------------LIEFCAGGAVDAVMLELERPLTESQIQV 139
Query: 174 VVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGET 233
V + LD L+YLH KI+HRD+K N+L + +K+ADFGV+
Sbjct: 140 VCKQTLD---ALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFI 196
Query: 234 GTLGYMAPEVL-----NGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQN 288
GT +MAPEV+ PY+ K DV+S GI L E+ + P+ +L+ V + +
Sbjct: 197 GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSE 256
Query: 289 LRPEI--PRCCPSSLANVMKRCWDANPDKR 316
P + P S+ + +K+C + N D R
Sbjct: 257 -PPTLAQPSRWSSNFKDFLKKCLEKNVDAR 285
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 130/305 (42%), Gaps = 66/305 (21%)
Query: 52 LVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGE-EGHRTEAEIAALRSAFTQEVAVWHK 110
L + + ARG FG V + VAVK+ + + ++E EI +
Sbjct: 17 LQLLEIKARGRFGCVWKAQLMNDFVAVKIFPLQDKQSWQSEREIFSTPG----------- 65
Query: 111 LDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLA 170
+ H N+ +FI A S L ++ ++ + G+L YL N +
Sbjct: 66 MKHENLLQFIAAEKRGSNLEVE------------LWLITAFHDKGSLTDYLKGN---IIT 110
Query: 171 FKVVVQLALDLARGLSYLHSQ-----------KIVHRDVKTENMLLDKNRTVKIADFGVA 219
+ + +A ++RGLSYLH I HRD K++N+LL + T +ADFG+A
Sbjct: 111 WNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLA 170
Query: 220 -RVEASN-PNDMTGETGTLGYMAPEVLNGN-PYNR----KCDVYSFGICLWEIY----CC 268
R E P D G+ GT YMAPEVL G + R + D+Y+ G+ LWE+
Sbjct: 171 VRFEPGKPPGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAA 230
Query: 269 DMPYPDL------------SFSEVTSAVVRQNLRPEI-----PRCCPSSLANVMKRCWDA 311
D P + S E+ VV + +RP I + L ++ CWD
Sbjct: 231 DGPVDEYMLPFEEEIGQHPSLEELQEVVVHKKMRPTIKDHWLKHPGLAQLCVTIEECWDH 290
Query: 312 NPDKR 316
+ + R
Sbjct: 291 DAEAR 295
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 101/213 (47%), Gaps = 32/213 (15%)
Query: 58 IARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPN 115
I GT+G V+ R G VA+K + R + E + S +E+++ +L+HPN
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKELNHPN 64
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVV 175
+ K + ++L++ E + + + + +P +K+YL +
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQ------------ 112
Query: 176 QLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETGT 235
L +GL++ HS +++HRD+K EN+L++ +K+ADFG+AR E T
Sbjct: 113 -----LLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT 167
Query: 236 LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC 268
L Y APE+L G C YS + +W + C
Sbjct: 168 LWYRAPEILLG------CKYYSTAVDIWSLGCI 194
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 101/213 (47%), Gaps = 32/213 (15%)
Query: 58 IARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPN 115
I GT+G V+ R G VA+K + R + E + S +E+++ +L+HPN
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKELNHPN 62
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVV 175
+ K + ++L++ E + + + +P +K+YL +
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ------------ 110
Query: 176 QLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETGT 235
L +GL++ HS +++HRD+K +N+L++ +K+ADFG+AR T E T
Sbjct: 111 -----LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT 165
Query: 236 LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC 268
L Y APE+L G C YS + +W + C
Sbjct: 166 LWYRAPEILLG------CKYYSTAVDIWSLGCI 192
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 101/213 (47%), Gaps = 32/213 (15%)
Query: 58 IARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPN 115
I GT+G V+ R G VA+K + R + E + S +E+++ +L+HPN
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKELNHPN 70
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVV 175
+ K + ++L++ E + + + +P +K+YL +
Sbjct: 71 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ------------ 118
Query: 176 QLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETGT 235
L +GL++ HS +++HRD+K +N+L++ +K+ADFG+AR T E T
Sbjct: 119 -----LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT 173
Query: 236 LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC 268
L Y APE+L G C YS + +W + C
Sbjct: 174 LWYRAPEILLG------CKYYSTAVDIWSLGCI 200
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 101/213 (47%), Gaps = 32/213 (15%)
Query: 58 IARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPN 115
I GT+G V+ R G VA+K + R + E + S +E+++ +L+HPN
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKELNHPN 63
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVV 175
+ K + ++L++ E + + + +P +K+YL +
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ------------ 111
Query: 176 QLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETGT 235
L +GL++ HS +++HRD+K +N+L++ +K+ADFG+AR T E T
Sbjct: 112 -----LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT 166
Query: 236 LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC 268
L Y APE+L G C YS + +W + C
Sbjct: 167 LWYRAPEILLG------CKYYSTAVDIWSLGCI 193
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 101/213 (47%), Gaps = 32/213 (15%)
Query: 58 IARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPN 115
I GT+G V+ R G VA+K + R + E + S +E+++ +L+HPN
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKELNHPN 62
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVV 175
+ K + ++L++ E + + + +P +K+YL +
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ------------ 110
Query: 176 QLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETGT 235
L +GL++ HS +++HRD+K +N+L++ +K+ADFG+AR T E T
Sbjct: 111 -----LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT 165
Query: 236 LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC 268
L Y APE+L G C YS + +W + C
Sbjct: 166 LWYRAPEILLG------CKYYSTAVDIWSLGCI 192
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 122/274 (44%), Gaps = 35/274 (12%)
Query: 54 IKSVIARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIA---ALRSAFTQEVAVW 108
+ ++ G VH R L D DVAVK+L A++A + F +E
Sbjct: 16 LGEILGFGGMSEVHLARDLRDHRDVAVKVL---------RADLARDPSFYLRFRREAQNA 66
Query: 109 HKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSN-ICCVVVEYLPGGALKTYLIKNRRR 167
L+HP + + G+ P+ + +V+EY+ G L+ I +
Sbjct: 67 AALNHPAIVAVY-------------DTGEAETPAGPLPYIVMEYVDGVTLRD--IVHTEG 111
Query: 168 KLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPN 227
+ K +++ D + L++ H I+HRDVK N+++ VK+ DFG+AR A + N
Sbjct: 112 PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGN 171
Query: 228 DMTGETGTLG---YMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAV 284
+T +G Y++PE G+ + + DVYS G L+E+ + P+ S V
Sbjct: 172 SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQH 231
Query: 285 VRQNLRPEIPR--CCPSSLANVMKRCWDANPDKR 316
VR++ P R + L V+ + NP+ R
Sbjct: 232 VREDPIPPSARHEGLSADLDAVVLKALAKNPENR 265
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 101/213 (47%), Gaps = 32/213 (15%)
Query: 58 IARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPN 115
I GT+G V+ R G VA+K + R + E + S +E+++ +L+HPN
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKELNHPN 63
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVV 175
+ K + ++L++ E + + + +P +K+YL +
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ------------ 111
Query: 176 QLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETGT 235
L +GL++ HS +++HRD+K +N+L++ +K+ADFG+AR T E T
Sbjct: 112 -----LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT 166
Query: 236 LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC 268
L Y APE+L G C YS + +W + C
Sbjct: 167 LWYRAPEILLG------CKYYSTAVDIWSLGCI 193
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 32/213 (15%)
Query: 58 IARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPN 115
I GT+G V+ R G VA+K + R + E + S +E+++ +L+HPN
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKELNHPN 66
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVV 175
+ K + I TEN +V E+L LKT++ + + ++
Sbjct: 67 IVKLLDV--------IHTENK--------LYLVFEFL-HQDLKTFMDASALTGIPLPLIK 109
Query: 176 QLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETGT 235
L +GL++ HS +++HRD+K +N+L++ +K+ADFG+AR E T
Sbjct: 110 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT 169
Query: 236 LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC 268
L Y APE+L G C YS + +W + C
Sbjct: 170 LWYRAPEILLG------CKYYSTAVDIWSLGCI 196
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 123/270 (45%), Gaps = 40/270 (14%)
Query: 58 IARGTFGTVHRGLYDGHDV--AVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPN 115
+ G FG V++ V A K++D ++E E+ + E+ + DHPN
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVID-----TKSEEEL----EDYMVEIDILASCDHPN 95
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRR--RKLAFKV 173
+ K + A + L I ++E+ GGA+ +++ R + +V
Sbjct: 96 IVKLLDAFYYENNLWI----------------LIEFCAGGAVDAVMLELERPLTESQIQV 139
Query: 174 VVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGET 233
V + LD L+YLH KI+HRD+K N+L + +K+ADFGV+
Sbjct: 140 VCKQTLD---ALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFI 196
Query: 234 GTLGYMAPEVL-----NGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQN 288
GT +MAPEV+ PY+ K DV+S GI L E+ + P+ +L+ V + +
Sbjct: 197 GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSE 256
Query: 289 LRPEI--PRCCPSSLANVMKRCWDANPDKR 316
P + P S+ + +K+C + N D R
Sbjct: 257 -PPTLAQPSRWSSNFKDFLKKCLEKNVDAR 285
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 101/213 (47%), Gaps = 32/213 (15%)
Query: 58 IARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPN 115
I GT+G V+ R G VA+K + R + E + S +E+++ +L+HPN
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKELNHPN 64
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVV 175
+ K + ++L++ E + + + +P +K+YL +
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ------------ 112
Query: 176 QLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETGT 235
L +GL++ HS +++HRD+K +N+L++ +K+ADFG+AR T E T
Sbjct: 113 -----LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT 167
Query: 236 LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC 268
L Y APE+L G C YS + +W + C
Sbjct: 168 LWYRAPEILLG------CKYYSTAVDIWSLGCI 194
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 108/224 (48%), Gaps = 32/224 (14%)
Query: 54 IKSVIARGTFGTVHR--GLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKL 111
I ++ +G+FG V + + AVK+++ ++ + I +EV + KL
Sbjct: 26 IVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTIL-------REVELLKKL 78
Query: 112 DHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAF 171
DHPN+ K SS +I V E GG L +IK R++ +
Sbjct: 79 DHPNIMKLFEILEDSSSFYI----------------VGELYTGGELFDEIIK--RKRFSE 120
Query: 172 KVVVQLALDLARGLSYLHSQKIVHRDVKTENMLL---DKNRTVKIADFGVARVEASNPND 228
++ + G++Y+H IVHRD+K EN+LL +K+ +KI DFG++ N
Sbjct: 121 HDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK- 179
Query: 229 MTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPY 272
M GT Y+APEVL G Y+ KCDV+S G+ L+ + P+
Sbjct: 180 MKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPF 222
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 133/289 (46%), Gaps = 63/289 (21%)
Query: 53 VIKSVIARGTFGTVHRGLY--DGHDVAVK-----LLDWGEEGHRTEAEIAALRSAFTQEV 105
+I+ + G+FG V + VA+K LL + R E EI+ L+
Sbjct: 12 IIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKL------ 65
Query: 106 AVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNR 165
L HP++ K + P++I +V+EY GG L Y+++ +
Sbjct: 66 -----LRHPHIIKLYDV---------------ITTPTDIV-MVIEY-AGGELFDYIVEKK 103
Query: 166 R------RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVA 219
R R+ +++ + Y H KIVHRD+K EN+LLD N VKIADFG++
Sbjct: 104 RMTEDEGRRFFQQIIC--------AIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLS 155
Query: 220 RVEASNPNDMTGETGTLGYMAPEVLNGNPY-NRKCDVYSFGICLWEIYCCDMPY-----P 273
+ ++ N + G+ Y APEV+NG Y + DV+S GI L+ + +P+ P
Sbjct: 156 NI-MTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIP 214
Query: 274 DLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 322
+L F +V S V +P ++++R A+P +R + E+
Sbjct: 215 NL-FKKVNSCVYV------MPDFLSPGAQSLIRRMIVADPMQRITIQEI 256
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 108/241 (44%), Gaps = 47/241 (19%)
Query: 30 PIGKASNFLKKQRQDWEIEPSKLVIKSVIARGTFGTVH--RGLYDGHDVAVKLLDWGEEG 87
P+G NF K ++ I GT+G V+ R G VA+K +
Sbjct: 2 PLGSMENFQKVEK---------------IGEGTYGVVYKARNKLTGEVVALKKI------ 40
Query: 88 HRTEAEIAALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCV 147
R + E + S +E+++ +L+HPN+ K + ++L++ E + +
Sbjct: 41 -RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDAS 99
Query: 148 VVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDK 207
+ +P +K+YL + L +GL++ HS +++HRD+K +N+L++
Sbjct: 100 ALTGIPLPLIKSYLFQ-----------------LLQGLAFCHSHRVLHRDLKPQNLLINT 142
Query: 208 NRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYC 267
+K+ADFG+AR E TL Y APE+L G C YS + +W + C
Sbjct: 143 EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG------CKYYSTAVDIWSLGC 196
Query: 268 C 268
Sbjct: 197 I 197
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 108/241 (44%), Gaps = 47/241 (19%)
Query: 30 PIGKASNFLKKQRQDWEIEPSKLVIKSVIARGTFGTVH--RGLYDGHDVAVKLLDWGEEG 87
P+G NF K ++ I GT+G V+ R G VA+K +
Sbjct: 1 PLGSMENFQKVEK---------------IGEGTYGVVYKARNKLTGEVVALKKI------ 39
Query: 88 HRTEAEIAALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCV 147
R + E + S +E+++ +L+HPN+ K + ++L++ E + +
Sbjct: 40 -RLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDAS 98
Query: 148 VVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDK 207
+ +P +K+YL + L +GL++ HS +++HRD+K +N+L++
Sbjct: 99 ALTGIPLPLIKSYLFQ-----------------LLQGLAFCHSHRVLHRDLKPQNLLINT 141
Query: 208 NRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYC 267
+K+ADFG+AR E TL Y APE+L G C YS + +W + C
Sbjct: 142 EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG------CKYYSTAVDIWSLGC 195
Query: 268 C 268
Sbjct: 196 I 196
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 108/224 (48%), Gaps = 32/224 (14%)
Query: 54 IKSVIARGTFGTVHR--GLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKL 111
I ++ +G+FG V + + AVK+++ ++ + I +EV + KL
Sbjct: 26 IVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTIL-------REVELLKKL 78
Query: 112 DHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAF 171
DHPN+ K SS +I V E GG L +IK R++ +
Sbjct: 79 DHPNIMKLFEILEDSSSFYI----------------VGELYTGGELFDEIIK--RKRFSE 120
Query: 172 KVVVQLALDLARGLSYLHSQKIVHRDVKTENMLL---DKNRTVKIADFGVARVEASNPND 228
++ + G++Y+H IVHRD+K EN+LL +K+ +KI DFG++ N
Sbjct: 121 HDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK- 179
Query: 229 MTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPY 272
M GT Y+APEVL G Y+ KCDV+S G+ L+ + P+
Sbjct: 180 MKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPF 222
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 32/213 (15%)
Query: 58 IARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPN 115
I GT+G V+ R G VA+K + R + E + S +E+++ +L+HPN
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKELNHPN 63
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVV 175
+ K + ++L++ E + + + +P +K+YL +
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQ------------ 111
Query: 176 QLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETGT 235
L +GL++ HS +++HRD+K EN+L++ +K+ADFG+AR E T
Sbjct: 112 -----LLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT 166
Query: 236 LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC 268
L Y APE+L G C YS + +W + C
Sbjct: 167 LWYRAPEILLG------CKYYSTAVDIWSLGCI 193
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 122/274 (44%), Gaps = 35/274 (12%)
Query: 54 IKSVIARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIA---ALRSAFTQEVAVW 108
+ ++ G VH R L D DVAVK+L A++A + F +E
Sbjct: 16 LGEILGFGGMSEVHLARDLRDHRDVAVKVL---------RADLARDPSFYLRFRREAQNA 66
Query: 109 HKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSN-ICCVVVEYLPGGALKTYLIKNRRR 167
L+HP + + G+ P+ + +V+EY+ G L+ I +
Sbjct: 67 AALNHPAIVAVY-------------DTGEAETPAGPLPYIVMEYVDGVTLRD--IVHTEG 111
Query: 168 KLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPN 227
+ K +++ D + L++ H I+HRDVK N+++ VK+ DFG+AR A + N
Sbjct: 112 PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGN 171
Query: 228 DMTGETGTLG---YMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAV 284
+T +G Y++PE G+ + + DVYS G L+E+ + P+ S V
Sbjct: 172 SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQH 231
Query: 285 VRQNLRPEIPR--CCPSSLANVMKRCWDANPDKR 316
VR++ P R + L V+ + NP+ R
Sbjct: 232 VREDPIPPSARHEGLSADLDAVVLKALAKNPENR 265
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 133/282 (47%), Gaps = 48/282 (17%)
Query: 48 EPSKLVIKSVIARGTFGTVH----------RGLYDGHDVAVKLLDWGEEGHRTEAEIAAL 97
+PS+ + V+ +G+FG V R LY A+K+L R +
Sbjct: 22 DPSQFELLKVLGQGSFGKVFLVKKISGSDARQLY-----AMKVLKKATLKVRDR-----V 71
Query: 98 RSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGAL 157
R+ +++ V +++HP + K A QTE +++++L GG L
Sbjct: 72 RTKMERDILV--EVNHPFIVKLHYA--------FQTEGK--------LYLILDFLRGGDL 113
Query: 158 KTYLIKNRRRKLAFK---VVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIA 214
T L K ++ F V LA +LA L +LHS I++RD+K EN+LLD+ +K+
Sbjct: 114 FTRLSK----EVMFTEEDVKFYLA-ELALALDHLHSLGIIYRDLKPENILLDEEGHIKLT 168
Query: 215 DFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPD 274
DFG+++ + GT+ YMAPEV+N + + D +SFG+ ++E+ +P+
Sbjct: 169 DFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQG 228
Query: 275 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
E + +++ L +P+ ++++ + NP R
Sbjct: 229 KDRKETMTMILKAKL--GMPQFLSPEAQSLLRMLFKRNPANR 268
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 32/213 (15%)
Query: 58 IARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPN 115
I GT+G V+ R G VA+K + R + E + S +E+++ +L+HPN
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKELNHPN 64
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVV 175
+ K + ++L++ E + + + +P +K+YL +
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ------------ 112
Query: 176 QLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETGT 235
L +GL++ HS +++HRD+K EN+L++ +K+ADFG+AR E T
Sbjct: 113 -----LLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT 167
Query: 236 LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC 268
L Y APE+L G C YS + +W + C
Sbjct: 168 LWYRAPEILLG------CKYYSTAVDIWSLGCI 194
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 133/282 (47%), Gaps = 48/282 (17%)
Query: 48 EPSKLVIKSVIARGTFGTVH----------RGLYDGHDVAVKLLDWGEEGHRTEAEIAAL 97
+PS+ + V+ +G+FG V R LY A+K+L R +
Sbjct: 23 DPSQFELLKVLGQGSFGKVFLVKKISGSDARQLY-----AMKVLKKATLKVRDR-----V 72
Query: 98 RSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGAL 157
R+ +++ V +++HP + K A QTE +++++L GG L
Sbjct: 73 RTKMERDILV--EVNHPFIVKLHYA--------FQTEGK--------LYLILDFLRGGDL 114
Query: 158 KTYLIKNRRRKLAFK---VVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIA 214
T L K ++ F V LA +LA L +LHS I++RD+K EN+LLD+ +K+
Sbjct: 115 FTRLSK----EVMFTEEDVKFYLA-ELALALDHLHSLGIIYRDLKPENILLDEEGHIKLT 169
Query: 215 DFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPD 274
DFG+++ + GT+ YMAPEV+N + + D +SFG+ ++E+ +P+
Sbjct: 170 DFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQG 229
Query: 275 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
E + +++ L +P+ ++++ + NP R
Sbjct: 230 KDRKETMTMILKAKL--GMPQFLSPEAQSLLRMLFKRNPANR 269
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 32/213 (15%)
Query: 58 IARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPN 115
I GT+G V+ R G VA+K + R + E + S +E+++ +L+HPN
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKELNHPN 65
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVV 175
+ K + ++L++ E + + + +P +K+YL +
Sbjct: 66 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ------------ 113
Query: 176 QLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETGT 235
L +GL++ HS +++HRD+K EN+L++ +K+ADFG+AR E T
Sbjct: 114 -----LLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT 168
Query: 236 LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC 268
L Y APE+L G C YS + +W + C
Sbjct: 169 LWYRAPEILLG------CKYYSTAVDIWSLGCI 195
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 101/213 (47%), Gaps = 32/213 (15%)
Query: 58 IARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPN 115
I GT+G V+ R G VA+K + R + E + S +E+++ +L+HPN
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKELNHPN 66
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVV 175
+ K + ++L++ E+ + + + +P +K+YL +
Sbjct: 67 IVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQ------------ 114
Query: 176 QLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETGT 235
L +GL++ HS +++HRD+K +N+L++ +K+ADFG+AR E T
Sbjct: 115 -----LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT 169
Query: 236 LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC 268
L Y APE+L G C YS + +W + C
Sbjct: 170 LWYRAPEILLG------CKYYSTAVDIWSLGCI 196
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 133/282 (47%), Gaps = 48/282 (17%)
Query: 48 EPSKLVIKSVIARGTFGTVH----------RGLYDGHDVAVKLLDWGEEGHRTEAEIAAL 97
+PS+ + V+ +G+FG V R LY A+K+L R +
Sbjct: 22 DPSQFELLKVLGQGSFGKVFLVKKISGSDARQLY-----AMKVLKKATLKVRDR-----V 71
Query: 98 RSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGAL 157
R+ +++ V +++HP + K A QTE +++++L GG L
Sbjct: 72 RTKMERDILV--EVNHPFIVKLHYA--------FQTEGK--------LYLILDFLRGGDL 113
Query: 158 KTYLIKNRRRKLAFK---VVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIA 214
T L K ++ F V LA +LA L +LHS I++RD+K EN+LLD+ +K+
Sbjct: 114 FTRLSK----EVMFTEEDVKFYLA-ELALALDHLHSLGIIYRDLKPENILLDEEGHIKLT 168
Query: 215 DFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPD 274
DFG+++ + GT+ YMAPEV+N + + D +SFG+ ++E+ +P+
Sbjct: 169 DFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQG 228
Query: 275 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
E + +++ L +P+ ++++ + NP R
Sbjct: 229 KDRKETMTMILKAKL--GMPQFLSPEAQSLLRMLFKRNPANR 268
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 101/213 (47%), Gaps = 32/213 (15%)
Query: 58 IARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPN 115
I GT+G V+ R G VA+K + R + E + S +E+++ +L+HPN
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKELNHPN 63
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVV 175
+ K + ++L++ E + + + +P +K+YL +
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ------------ 111
Query: 176 QLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETGT 235
L +GL++ HS +++HRD+K +N+L++ +K+ADFG+AR T E T
Sbjct: 112 -----LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT 166
Query: 236 LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC 268
L Y APE+L G Y YS + +W + C
Sbjct: 167 LWYRAPEILLGXKY------YSTAVDIWSLGCI 193
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 101/213 (47%), Gaps = 32/213 (15%)
Query: 58 IARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPN 115
I GT+G V+ R G VA+K + R + E + S +E+++ +L+HPN
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKELNHPN 65
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVV 175
+ K + ++L++ E + + + + +P +K+YL +
Sbjct: 66 IVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQ------------ 113
Query: 176 QLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETGT 235
L +GL++ HS +++HRD+K +N+L++ +K+ADFG+AR E T
Sbjct: 114 -----LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT 168
Query: 236 LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC 268
L Y APE+L G C YS + +W + C
Sbjct: 169 LWYRAPEILLG------CKYYSTAVDIWSLGCI 195
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 101/213 (47%), Gaps = 32/213 (15%)
Query: 58 IARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPN 115
I GT+G V+ R G VA+K + R + E + S +E+++ +L+HPN
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKELNHPN 70
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVV 175
+ K + ++L++ E + + + +P +K+YL +
Sbjct: 71 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ------------ 118
Query: 176 QLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETGT 235
L +GL++ HS +++HRD+K +N+L++ +K+ADFG+AR T E T
Sbjct: 119 -----LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT 173
Query: 236 LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC 268
L Y APE+L G Y YS + +W + C
Sbjct: 174 LWYRAPEILLGXKY------YSTAVDIWSLGCI 200
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 132/304 (43%), Gaps = 65/304 (21%)
Query: 52 LVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGE-EGHRTEAEIAALRSAFTQEVAVWHK 110
L + V ARG FG V + VAVK+ + + + E E+ +L
Sbjct: 26 LQLLEVKARGRFGCVWKAQLLNEYVAVKIFPIQDKQSWQNEYEVYSLPG----------- 74
Query: 111 LDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLA 170
+ H N+ +FIGA + + + ++ + G+L +L N ++
Sbjct: 75 MKHENILQFIGAEKRGTSVDVD------------LWLITAFHEKGSLSDFLKAN---VVS 119
Query: 171 FKVVVQLALDLARGLSYLHSQ----------KIVHRDVKTENMLLDKNRTVKIADFGVA- 219
+ + +A +ARGL+YLH I HRD+K++N+LL N T IADFG+A
Sbjct: 120 WNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLAL 179
Query: 220 RVEAS-NPNDMTGETGTLGYMAPEVLNGN-PYNR----KCDVYSFGICLWEI----YCCD 269
+ EA + D G+ GT YMAPEVL G + R + D+Y+ G+ LWE+ D
Sbjct: 180 KFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAAD 239
Query: 270 MPYPDL------------SFSEVTSAVVRQNLRPEI-----PRCCPSSLANVMKRCWDAN 312
P + S ++ VV + RP + + L ++ CWD +
Sbjct: 240 GPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHD 299
Query: 313 PDKR 316
+ R
Sbjct: 300 AEAR 303
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 123/269 (45%), Gaps = 36/269 (13%)
Query: 58 IARGTFGTVHRGL--YDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPN 115
+ G FG V++ G A K+++ ++E E+ + E+ + DHP
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIE-----TKSEEEL----EDYIVEIEILATCDHPY 77
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVV 175
+ K +GA +L I ++E+ PGGA+ +++ R ++ V
Sbjct: 78 IVKLLGAYYHDGKLWI----------------MIEFCPGGAVDAIMLELDRGLTEPQIQV 121
Query: 176 QLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETGT 235
+ + L++LHS++I+HRD+K N+L+ +++ADFGV+ GT
Sbjct: 122 -VCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGT 180
Query: 236 LGYMAPEV-----LNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLR 290
+MAPEV + PY+ K D++S GI L E+ + P+ +L+ V + + +
Sbjct: 181 PYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSD-P 239
Query: 291 PEI--PRCCPSSLANVMKRCWDANPDKRP 317
P + P + +K D NP+ RP
Sbjct: 240 PTLLTPSKWSVEFRDFLKIALDKNPETRP 268
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 123/269 (45%), Gaps = 36/269 (13%)
Query: 58 IARGTFGTVHRGL--YDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPN 115
+ G FG V++ G A K+++ ++E E+ + E+ + DHP
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIE-----TKSEEEL----EDYIVEIEILATCDHPY 69
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVV 175
+ K +GA +L I ++E+ PGGA+ +++ R ++ V
Sbjct: 70 IVKLLGAYYHDGKLWI----------------MIEFCPGGAVDAIMLELDRGLTEPQIQV 113
Query: 176 QLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETGT 235
+ + L++LHS++I+HRD+K N+L+ +++ADFGV+ GT
Sbjct: 114 -VCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGT 172
Query: 236 LGYMAPEV-----LNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLR 290
+MAPEV + PY+ K D++S GI L E+ + P+ +L+ V + + +
Sbjct: 173 PYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSD-P 231
Query: 291 PEI--PRCCPSSLANVMKRCWDANPDKRP 317
P + P + +K D NP+ RP
Sbjct: 232 PTLLTPSKWSVEFRDFLKIALDKNPETRP 260
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 100/213 (46%), Gaps = 32/213 (15%)
Query: 58 IARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPN 115
I GT+G V+ R G VA+K + R + E + S +E+++ +L+HPN
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKELNHPN 62
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVV 175
+ K + ++L++ E + + + +P +K+YL +
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ------------ 110
Query: 176 QLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETGT 235
L +GL++ HS +++HRD+K +N+L++ +K+ADFG+AR E T
Sbjct: 111 -----LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT 165
Query: 236 LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC 268
L Y APE+L G C YS + +W + C
Sbjct: 166 LWYRAPEILLG------CKYYSTAVDIWSLGCI 192
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 100/213 (46%), Gaps = 32/213 (15%)
Query: 58 IARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPN 115
I GT+G V+ R G VA+K + R + E + S +E+++ +L+HPN
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKELNHPN 63
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVV 175
+ K + ++L++ E + + + +P +K+YL +
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ------------ 111
Query: 176 QLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETGT 235
L +GL++ HS +++HRD+K +N+L++ +K+ADFG+AR E T
Sbjct: 112 -----LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT 166
Query: 236 LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC 268
L Y APE+L G C YS + +W + C
Sbjct: 167 LWYRAPEILLG------CKYYSTAVDIWSLGCI 193
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 100/213 (46%), Gaps = 32/213 (15%)
Query: 58 IARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPN 115
I GT+G V+ R G VA+K + R + E + S +E+++ +L+HPN
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKELNHPN 63
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVV 175
+ K + ++L++ E + + + +P +K+YL +
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ------------ 111
Query: 176 QLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETGT 235
L +GL++ HS +++HRD+K +N+L++ +K+ADFG+AR E T
Sbjct: 112 -----LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT 166
Query: 236 LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC 268
L Y APE+L G C YS + +W + C
Sbjct: 167 LWYRAPEILLG------CKYYSTAVDIWSLGCI 193
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 100/213 (46%), Gaps = 32/213 (15%)
Query: 58 IARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPN 115
I GT+G V+ R G VA+K + R + E + S +E+++ +L+HPN
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKELNHPN 65
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVV 175
+ K + ++L++ E + + + +P +K+YL +
Sbjct: 66 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ------------ 113
Query: 176 QLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETGT 235
L +GL++ HS +++HRD+K +N+L++ +K+ADFG+AR E T
Sbjct: 114 -----LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT 168
Query: 236 LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC 268
L Y APE+L G C YS + +W + C
Sbjct: 169 LWYRAPEILLG------CKYYSTAVDIWSLGCI 195
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 100/213 (46%), Gaps = 32/213 (15%)
Query: 58 IARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPN 115
I GT+G V+ R G VA+K + R + E + S +E+++ +L+HPN
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKELNHPN 63
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVV 175
+ K + ++L++ E + + + +P +K+YL +
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ------------ 111
Query: 176 QLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETGT 235
L +GL++ HS +++HRD+K +N+L++ +K+ADFG+AR E T
Sbjct: 112 -----LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT 166
Query: 236 LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC 268
L Y APE+L G C YS + +W + C
Sbjct: 167 LWYRAPEILLG------CKYYSTAVDIWSLGCI 193
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 121/274 (44%), Gaps = 35/274 (12%)
Query: 54 IKSVIARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIA---ALRSAFTQEVAVW 108
+ ++ G VH R L D DVAVK+L A++A + F +E
Sbjct: 16 LGEILGFGGMSEVHLARDLRDHRDVAVKVL---------RADLARDPSFYLRFRREAQNA 66
Query: 109 HKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSN-ICCVVVEYLPGGALKTYLIKNRRR 167
L+HP + + G+ P+ + +V+EY+ G L+ I +
Sbjct: 67 AALNHPAIVAVY-------------DTGEAETPAGPLPYIVMEYVDGVTLRD--IVHTEG 111
Query: 168 KLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPN 227
+ K +++ D + L++ H I+HRDVK N+L+ VK+ DFG+AR A + N
Sbjct: 112 PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGN 171
Query: 228 DMTGETGTLG---YMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAV 284
+ +G Y++PE G+ + + DVYS G L+E+ + P+ S V
Sbjct: 172 SVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQH 231
Query: 285 VRQNLRPEIPR--CCPSSLANVMKRCWDANPDKR 316
VR++ P R + L V+ + NP+ R
Sbjct: 232 VREDPIPPSARHEGLSADLDAVVLKALAKNPENR 265
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 100/213 (46%), Gaps = 32/213 (15%)
Query: 58 IARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPN 115
I GT+G V+ R G VA+K + R + E + S +E+++ +L+HPN
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKELNHPN 65
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVV 175
+ K + ++L++ E + + + +P +K+YL +
Sbjct: 66 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ------------ 113
Query: 176 QLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETGT 235
L +GL++ HS +++HRD+K +N+L++ +K+ADFG+AR E T
Sbjct: 114 -----LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT 168
Query: 236 LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC 268
L Y APE+L G C YS + +W + C
Sbjct: 169 LWYRAPEILLG------CKYYSTAVDIWSLGCI 195
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 100/213 (46%), Gaps = 32/213 (15%)
Query: 58 IARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPN 115
I GT+G V+ R G VA+ + R + E + S +E+++ +L+HPN
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALXKI-------RLDTETEGVPSTAIREISLLKELNHPN 63
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVV 175
+ K + ++L++ E + + + +P +K+YL +
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ------------ 111
Query: 176 QLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETGT 235
L +GL++ HS +++HRD+K +N+L++ +K+ADFG+AR T E T
Sbjct: 112 -----LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT 166
Query: 236 LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC 268
L Y APE+L G C YS + +W + C
Sbjct: 167 LWYRAPEILLG------CKYYSTAVDIWSLGCI 193
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 100/213 (46%), Gaps = 32/213 (15%)
Query: 58 IARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPN 115
I GT+G V+ R G VA+ + R + E + S +E+++ +L+HPN
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALXKI-------RLDTETEGVPSTAIREISLLKELNHPN 62
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVV 175
+ K + ++L++ E + + + +P +K+YL +
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ------------ 110
Query: 176 QLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETGT 235
L +GL++ HS +++HRD+K +N+L++ +K+ADFG+AR T E T
Sbjct: 111 -----LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT 165
Query: 236 LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC 268
L Y APE+L G C YS + +W + C
Sbjct: 166 LWYRAPEILLG------CKYYSTAVDIWSLGCI 192
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 100/213 (46%), Gaps = 32/213 (15%)
Query: 58 IARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPN 115
I GT+G V+ R G VA+K + R + E + S +E+++ +L+HPN
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKELNHPN 62
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVV 175
+ K + ++L++ E + + + +P +K+YL +
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ------------ 110
Query: 176 QLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETGT 235
L +GL++ HS +++HRD+K +N+L++ +K+ADFG+AR E T
Sbjct: 111 -----LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT 165
Query: 236 LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC 268
L Y APE+L G C YS + +W + C
Sbjct: 166 LWYRAPEILLG------CKYYSTAVDIWSLGCI 192
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 100/213 (46%), Gaps = 32/213 (15%)
Query: 58 IARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPN 115
I GT+G V+ R G VA+K + R + E + S +E+++ +L+HPN
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKELNHPN 66
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVV 175
+ K + ++L++ E + + + +P +K+YL +
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ------------ 114
Query: 176 QLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETGT 235
L +GL++ HS +++HRD+K +N+L++ +K+ADFG+AR E T
Sbjct: 115 -----LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT 169
Query: 236 LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC 268
L Y APE+L G C YS + +W + C
Sbjct: 170 LWYRAPEILLG------CKYYSTAVDIWSLGCI 196
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 100/213 (46%), Gaps = 32/213 (15%)
Query: 58 IARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPN 115
I GT+G V+ R G VA+K + R + E + S +E+++ +L+HPN
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKELNHPN 64
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVV 175
+ K + ++L++ E + + + +P +K+YL +
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ------------ 112
Query: 176 QLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETGT 235
L +GL++ HS +++HRD+K +N+L++ +K+ADFG+AR E T
Sbjct: 113 -----LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT 167
Query: 236 LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC 268
L Y APE+L G C YS + +W + C
Sbjct: 168 LWYRAPEILLG------CKYYSTAVDIWSLGCI 194
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 100/213 (46%), Gaps = 32/213 (15%)
Query: 58 IARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPN 115
I GT+G V+ R G VA+K + R + E + S +E+++ +L+HPN
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKELNHPN 63
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVV 175
+ K + ++L++ E + + + +P +K+YL +
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ------------ 111
Query: 176 QLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETGT 235
L +GL++ HS +++HRD+K +N+L++ +K+ADFG+AR E T
Sbjct: 112 -----LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT 166
Query: 236 LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC 268
L Y APE+L G C YS + +W + C
Sbjct: 167 LWYRAPEILLG------CKYYSTAVDIWSLGCI 193
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 100/213 (46%), Gaps = 32/213 (15%)
Query: 58 IARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPN 115
I GT+G V+ R G VA+K + R + E + S +E+++ +L+HPN
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKELNHPN 64
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVV 175
+ K + ++L++ E + + + +P +K+YL +
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ------------ 112
Query: 176 QLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETGT 235
L +GL++ HS +++HRD+K +N+L++ +K+ADFG+AR E T
Sbjct: 113 -----LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT 167
Query: 236 LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCC 268
L Y APE+L G C YS + +W + C
Sbjct: 168 LWYRAPEILLG------CKYYSTAVDIWSLGCI 194
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 132/282 (46%), Gaps = 41/282 (14%)
Query: 57 VIARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHP 114
V+ +G+FG V + G + AVK++ + +T+ E + +EV + +LDHP
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKE------SLLREVQLLKQLDHP 86
Query: 115 NVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVV 174
N+ K + +V E GG L +I R++ +
Sbjct: 87 NIXKLY----------------EFFEDKGYFYLVGEVYTGGELFDEIIS--RKRFSEVDA 128
Query: 175 VQLALDLARGLSYLHSQKIVHRDVKTENMLLD---KNRTVKIADFGVA-RVEASNPNDMT 230
++ + G++Y H KIVHRD+K EN+LL+ K+ ++I DFG++ EAS
Sbjct: 129 ARIIRQVLSGITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK--XK 186
Query: 231 GETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLR 290
+ GT Y+APEVL+G Y+ KCDV+S G+ L+ + P+ + ++ V +
Sbjct: 187 DKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYT 245
Query: 291 PEIP--RCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAID 330
E+P + S +++++ P R +S +A+D
Sbjct: 246 FELPQWKKVSESAKDLIRKXLTYVPSXR------ISARDALD 281
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 104/224 (46%), Gaps = 22/224 (9%)
Query: 103 QEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLI 162
QE+A+ KLDHPNV K + +E H+ +V E + G +
Sbjct: 85 QEIAILKKLDHPNVVKLVEVLDDPNEDHLY--------------MVFELVNQGPVMEVPT 130
Query: 163 KNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVE 222
+ + Q DL +G+ YLH QKI+HRD+K N+L+ ++ +KIADFGV+
Sbjct: 131 LKPLSEDQARFYFQ---DLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEF 187
Query: 223 ASNPNDMTGETGTLGYMAPEVLNGNP---YNRKCDVYSFGICLWEIYCCDMPYPDLSFSE 279
+ ++ GT +MAPE L+ + DV++ G+ L+ P+ D
Sbjct: 188 KGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMC 247
Query: 280 VTSAVVRQNLR-PEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 322
+ S + Q L P+ P L +++ R D NP+ R + E+
Sbjct: 248 LHSKIKSQALEFPDQPDIA-EDLKDLITRMLDKNPESRIVVPEI 290
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 124/268 (46%), Gaps = 41/268 (15%)
Query: 61 GTFGTVHRGLYDGHDV--AVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPNVTK 118
G FG V++ V A K++D ++E E+ + E+ + DHPN+ K
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVID-----TKSEEEL----EDYMVEIDILASCDHPNIVK 71
Query: 119 FIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRR--RKLAFKVVVQ 176
+ A + L I ++E+ GGA+ +++ R + +VV +
Sbjct: 72 LLDAFYYENNLWI----------------LIEFCAGGAVDAVMLELERPLTESQIQVVCK 115
Query: 177 LALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGV-ARVEASNPNDMTGETGT 235
LD L+YLH KI+HRD+K N+L + +K+ADFGV A+ + GT
Sbjct: 116 QTLD---ALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGT 172
Query: 236 LGYMAPEVL-----NGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLR 290
+MAPEV+ PY+ K DV+S GI L E+ + P+ +L+ V + +
Sbjct: 173 PYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSE-P 231
Query: 291 PEI--PRCCPSSLANVMKRCWDANPDKR 316
P + P S+ + +K+C + N D R
Sbjct: 232 PTLAQPSRWSSNFKDFLKKCLEKNVDAR 259
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 131/293 (44%), Gaps = 59/293 (20%)
Query: 56 SVIARGTFGTV--HRGLYDGHDVAVKLLDWGEEGHRT-EAEIAALRSAFTQEVAVWHK-- 110
+V+ +G FG V R D A+K + EE T +E+ L S Q V ++
Sbjct: 12 AVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAW 71
Query: 111 LDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIK---NRRR 167
L+ N K + A S L IQ +EY G L + N++R
Sbjct: 72 LERRNFVKPMTAVKKKSTLFIQ----------------MEYCENGTLYDLIHSENLNQQR 115
Query: 168 KLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVA-------- 219
+++ Q+ LSY+HSQ I+HRD+K N+ +D++R VKI DFG+A
Sbjct: 116 DEYWRLFRQIL----EALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLD 171
Query: 220 --RVEASN----PNDMTGETGTLGYMAPEVLNGN-PYNRKCDVYSFGICLWEIYCCDMPY 272
++++ N +++T GT Y+A EVL+G YN K D+YS GI +E M Y
Sbjct: 172 ILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFE-----MIY 226
Query: 273 PDLSFSEVTSAV-VRQNLRPEIPRCCPSSLANVMK-------RCWDANPDKRP 317
P FS V + + LR P N MK D +P+KRP
Sbjct: 227 P---FSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRP 276
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 118/263 (44%), Gaps = 33/263 (12%)
Query: 58 IARGTFGTVHRGLYD--GHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPN 115
+ G++G+V++ ++ G VA+K + + + +E+++ + D P+
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIK-----------QVPVESDLQEIIKEISIMQQCDSPH 85
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVV 175
V K+ G+ +++L I V+EY G++ +I+ R + L +
Sbjct: 86 VVKYYGSYFKNTDLWI----------------VMEYCGAGSVSD-IIRLRNKTLTEDEIA 128
Query: 176 QLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETGT 235
+ +GL YLH + +HRD+K N+LL+ K+ADFGVA GT
Sbjct: 129 TILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGT 188
Query: 236 LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEI-- 293
+MAPEV+ YN D++S GI E+ PY D+ ++ N P
Sbjct: 189 PFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAI-FMIPTNPPPTFRK 247
Query: 294 PRCCPSSLANVMKRCWDANPDKR 316
P + + +K+C +P++R
Sbjct: 248 PELWSDNFTDFVKQCLVKSPEQR 270
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 126/271 (46%), Gaps = 35/271 (12%)
Query: 58 IARGTFGTVHRGL--YDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPN 115
I +G GTV+ + G +VA++ ++ ++ + E+ V + +PN
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK---------ELIINEILVMRENKNPN 78
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVV 175
+ ++ + + EL VV+EYL GG+L + + + V
Sbjct: 79 IVNYLDSYLVGDEL----------------WVVMEYLAGGSLTDVVTETCMDEGQIAAVC 122
Query: 176 QLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETGT 235
+ L + L +LHS +++HRD+K++N+LL + +VK+ DFG + + GT
Sbjct: 123 RECL---QALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGT 179
Query: 236 LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA-VVRQNLRPEI- 293
+MAPEV+ Y K D++S GI E+ + PY L+ + + + ++ N PE+
Sbjct: 180 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY--LNENPLRALYLIATNGTPELQ 237
Query: 294 -PRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
P + + + RC D + +KR E++
Sbjct: 238 NPEKLSAIFRDFLNRCLDMDVEKRGSAKELL 268
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 126/271 (46%), Gaps = 35/271 (12%)
Query: 58 IARGTFGTVHRGL--YDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPN 115
I +G GTV+ + G +VA++ ++ ++ + E+ V + +PN
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK---------ELIINEILVMRENKNPN 78
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVV 175
+ ++ + + EL VV+EYL GG+L + + + V
Sbjct: 79 IVNYLDSYLVGDEL----------------WVVMEYLAGGSLTDVVTETCMDEGQIAAVC 122
Query: 176 QLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETGT 235
+ L + L +LHS +++HRD+K++N+LL + +VK+ DFG + + GT
Sbjct: 123 RECL---QALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGT 179
Query: 236 LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA-VVRQNLRPEI- 293
+MAPEV+ Y K D++S GI E+ + PY L+ + + + ++ N PE+
Sbjct: 180 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY--LNENPLRALYLIATNGTPELQ 237
Query: 294 -PRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
P + + + RC D + +KR E++
Sbjct: 238 NPEKLSAIFRDFLNRCLDMDVEKRGSAKELL 268
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 94/179 (52%), Gaps = 13/179 (7%)
Query: 147 VVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLD 206
V+EY+ GG L ++ R+RKL + + +++ L+YLH + I++RD+K +N+LLD
Sbjct: 130 FVIEYVNGGDLMFHM--QRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLD 187
Query: 207 KNRTVKIADFGVARVEASNPNDMTGET-GTLGYMAPEVLNGNPYNRKCDVYSFGICLWEI 265
+K+ D+G+ + E P D T GT Y+APE+L G Y D ++ G+ ++E+
Sbjct: 188 SEGHIKLTDYGMCK-EGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEM 246
Query: 266 YCCDMPY--------PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
P+ PD + + V+ + + IPR A+V+K + +P +R
Sbjct: 247 MAGRSPFDIVGSSDNPDQNTEDYLFQVILEK-QIRIPRSLSVKAASVLKSFLNKDPKER 304
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 94/179 (52%), Gaps = 13/179 (7%)
Query: 147 VVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLD 206
V+EY+ GG L ++ R+RKL + + +++ L+YLH + I++RD+K +N+LLD
Sbjct: 83 FVIEYVNGGDLMFHM--QRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLD 140
Query: 207 KNRTVKIADFGVARVEASNPNDMTGET-GTLGYMAPEVLNGNPYNRKCDVYSFGICLWEI 265
+K+ D+G+ + E P D T GT Y+APE+L G Y D ++ G+ ++E+
Sbjct: 141 SEGHIKLTDYGMCK-EGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEM 199
Query: 266 YCCDMPY--------PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
P+ PD + + V+ + + IPR A+V+K + +P +R
Sbjct: 200 MAGRSPFDIVGSSDNPDQNTEDYLFQVILEK-QIRIPRSLSVKAASVLKSFLNKDPKER 257
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 94/179 (52%), Gaps = 13/179 (7%)
Query: 147 VVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLD 206
V+EY+ GG L ++ R+RKL + + +++ L+YLH + I++RD+K +N+LLD
Sbjct: 87 FVIEYVNGGDLMFHM--QRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLD 144
Query: 207 KNRTVKIADFGVARVEASNPNDMTGET-GTLGYMAPEVLNGNPYNRKCDVYSFGICLWEI 265
+K+ D+G+ + E P D T GT Y+APE+L G Y D ++ G+ ++E+
Sbjct: 145 SEGHIKLTDYGMCK-EGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEM 203
Query: 266 YCCDMPY--------PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
P+ PD + + V+ + + IPR A+V+K + +P +R
Sbjct: 204 MAGRSPFDIVGSSDNPDQNTEDYLFQVILEK-QIRIPRSLSVKAASVLKSFLNKDPKER 261
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 94/179 (52%), Gaps = 13/179 (7%)
Query: 147 VVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLD 206
V+EY+ GG L ++ R+RKL + + +++ L+YLH + I++RD+K +N+LLD
Sbjct: 98 FVIEYVNGGDLMFHM--QRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLD 155
Query: 207 KNRTVKIADFGVARVEASNPNDMTGET-GTLGYMAPEVLNGNPYNRKCDVYSFGICLWEI 265
+K+ D+G+ + E P D T GT Y+APE+L G Y D ++ G+ ++E+
Sbjct: 156 SEGHIKLTDYGMCK-EGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEM 214
Query: 266 YCCDMPY--------PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
P+ PD + + V+ + + IPR A+V+K + +P +R
Sbjct: 215 MAGRSPFDIVGSSDNPDQNTEDYLFQVILEK-QIRIPRSMSVKAASVLKSFLNKDPKER 272
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 106/225 (47%), Gaps = 36/225 (16%)
Query: 58 IARGTFGTVHRGLYDGHDVAVKL----LDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDH 113
+ GT+ TV++GL V V L LD EEG + A +E+++ +L H
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEVKLD-SEEGTPSTA---------IREISLMKELKH 62
Query: 114 PNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYL----IKNRRRKL 169
N+ + I TEN +V E++ LK Y+ + N R L
Sbjct: 63 ENIVRLYDV--------IHTENK--------LTLVFEFM-DNDLKKYMDSRTVGNTPRGL 105
Query: 170 AFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDM 229
+V L +GL++ H KI+HRD+K +N+L++K +K+ DFG+AR N
Sbjct: 106 ELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTF 165
Query: 230 TGETGTLGYMAPEVLNGN-PYNRKCDVYSFGICLWEIYCCDMPYP 273
+ E TL Y AP+VL G+ Y+ D++S G L E+ +P
Sbjct: 166 SSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFP 210
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 97/203 (47%), Gaps = 30/203 (14%)
Query: 71 YDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELH 130
+ G VAVK +D ++ R EV + H NV + + EL
Sbjct: 68 HTGKQVAVKKMDLRKQQRR---------ELLFNEVVIMRDYHHDNVVDMYSSYLVGDEL- 117
Query: 131 IQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHS 190
VV+E+L GGAL + R + + + + L + R LSYLH+
Sbjct: 118 ---------------WVVMEFLEGGALTDIVTHTRMNE---EQIATVCLSVLRALSYLHN 159
Query: 191 QKIVHRDVKTENMLLDKNRTVKIADFGV-ARVEASNPNDMTGETGTLGYMAPEVLNGNPY 249
Q ++HRD+K++++LL + +K++DFG A+V P GT +MAPEV++ PY
Sbjct: 160 QGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKR-KXLVGTPYWMAPEVISRLPY 218
Query: 250 NRKCDVYSFGICLWEIYCCDMPY 272
+ D++S GI + E+ + PY
Sbjct: 219 GTEVDIWSLGIMVIEMIDGEPPY 241
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 120/235 (51%), Gaps = 29/235 (12%)
Query: 96 ALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGG 155
A+R+ +E+ V H+ + P + F GA E+ +IC +E++ GG
Sbjct: 65 AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEI-------------SIC---MEHMDGG 108
Query: 156 ALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQ-KIVHRDVKTENMLLDKNRTVKIA 214
+L L K R + +++ ++++ + +GL+YL + KI+HRDVK N+L++ +K+
Sbjct: 109 SLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLC 166
Query: 215 DFGVA-RVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPY- 272
DFGV+ ++ S N GT YM+PE L G Y+ + D++S G+ L E+ P
Sbjct: 167 DFGVSGQLIDSMANSF---VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIG 223
Query: 273 ---PDLSFSEVTSAVVRQNLRPEIPRCCPS-SLANVMKRCWDANPDKRPEMDEVV 323
++ E+ +V + P++P S + + +C NP +R ++ +++
Sbjct: 224 SGSGSMAIFELLDYIVNEP-PPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLM 277
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 126/271 (46%), Gaps = 35/271 (12%)
Query: 58 IARGTFGTVHRGL--YDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPN 115
I +G GTV+ + G +VA++ ++ ++ + E+ V + +PN
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK---------ELIINEILVMRENKNPN 79
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVV 175
+ ++ + + EL VV+EYL GG+L + + + V
Sbjct: 80 IVNYLDSYLVGDEL----------------WVVMEYLAGGSLTDVVTETCMDEGQIAAVC 123
Query: 176 QLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETGT 235
+ L + L +LHS +++HRD+K++N+LL + +VK+ DFG + + GT
Sbjct: 124 RECL---QALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGT 180
Query: 236 LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA-VVRQNLRPEI- 293
+MAPEV+ Y K D++S GI E+ + PY L+ + + + ++ N PE+
Sbjct: 181 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY--LNENPLRALYLIATNGTPELQ 238
Query: 294 -PRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
P + + + RC + + +KR E++
Sbjct: 239 NPEKLSAIFRDFLNRCLEMDVEKRGSAKELI 269
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 109/229 (47%), Gaps = 38/229 (16%)
Query: 100 AFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGAL-- 157
+ E+AV HK+ HPN+ L++ +++ + GG L
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIYESGGHLYL----------------IMQLVSGGELFD 105
Query: 158 ----KTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENML---LDKNRT 210
K + + +L F+V+ + YLH IVHRD+K EN+L LD++
Sbjct: 106 RIVEKGFYTERDASRLIFQVL--------DAVKYLHDLGIVHRDLKPENLLYYSLDEDSK 157
Query: 211 VKIADFGVARVEASNPND-MTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCD 269
+ I+DFG++++E +P ++ GT GY+APEVL PY++ D +S G+ + + C
Sbjct: 158 IMISDFGLSKME--DPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGY 215
Query: 270 MPYPDLSFSEVTSAVVRQNLRPEIPRC--CPSSLANVMKRCWDANPDKR 316
P+ D + +++ +++ + P S + ++ + +P+KR
Sbjct: 216 PPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKR 264
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 125/274 (45%), Gaps = 32/274 (11%)
Query: 58 IARGTFGTVHRGLYDGHDVAVKLLDWGEEGHR--TEAEIAALRSAFTQEVAVWHKLDHPN 115
I RG+F TV++GL V V W E R T++E R F +E L HPN
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVA---WCELQDRKLTKSE----RQRFKEEAEXLKGLQHPN 86
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVV-EYLPGGALKTYLIKNRRRKLAFKVV 174
+ +F ++ + + C V+V E G LKTYL + + K+ KV+
Sbjct: 87 IVRFY-------------DSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKI--KVL 131
Query: 175 VQLALDLARGLSYLHSQK--IVHRDVKTENMLLD-KNRTVKIADFGVARVEASNPNDMTG 231
+ +GL +LH++ I+HRD+K +N+ + +VKI D G+A ++ ++
Sbjct: 132 RSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAV- 190
Query: 232 ETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRP 291
GT + APE Y+ DVY+FG C E + PY + + V ++P
Sbjct: 191 -IGTPEFXAPEXYE-EKYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKP 248
Query: 292 -EIPRCCPSSLANVMKRCWDANPDKRPEMDEVVS 324
+ + +++ C N D+R + ++++
Sbjct: 249 ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 109/229 (47%), Gaps = 38/229 (16%)
Query: 100 AFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGAL-- 157
+ E+AV HK+ HPN+ L++ +++ + GG L
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIYESGGHLYL----------------IMQLVSGGELFD 105
Query: 158 ----KTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENML---LDKNRT 210
K + + +L F+V+ + YLH IVHRD+K EN+L LD++
Sbjct: 106 RIVEKGFYTERDASRLIFQVL--------DAVKYLHDLGIVHRDLKPENLLYYSLDEDSK 157
Query: 211 VKIADFGVARVEASNPND-MTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCD 269
+ I+DFG++++E +P ++ GT GY+APEVL PY++ D +S G+ + + C
Sbjct: 158 IMISDFGLSKME--DPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGY 215
Query: 270 MPYPDLSFSEVTSAVVRQNLRPEIPRC--CPSSLANVMKRCWDANPDKR 316
P+ D + +++ +++ + P S + ++ + +P+KR
Sbjct: 216 PPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKR 264
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 121/241 (50%), Gaps = 35/241 (14%)
Query: 96 ALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGG 155
A+R+ +E+ V H+ + P + F GA E+ +IC +E++ GG
Sbjct: 46 AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEI-------------SIC---MEHMDGG 89
Query: 156 ALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQ-KIVHRDVKTENMLLDKNRTVKIA 214
+L L K R + +++ ++++ + +GL+YL + KI+HRDVK N+L++ +K+
Sbjct: 90 SLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLC 147
Query: 215 DFGVA-RVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPY- 272
DFGV+ ++ S N GT YM+PE L G Y+ + D++S G+ L E+ P
Sbjct: 148 DFGVSGQLIDSMANSF---VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIP 204
Query: 273 ---------PDLSFSEVTSAVVRQNLRPEIPRCCPS-SLANVMKRCWDANPDKRPEMDEV 322
P ++ E+ +V + P++P S + + +C NP +R ++ ++
Sbjct: 205 PPDAKEDSRPPMAIFELLDYIVNEP-PPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQL 263
Query: 323 V 323
+
Sbjct: 264 M 264
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 108/225 (48%), Gaps = 38/225 (16%)
Query: 104 EVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGAL------ 157
E+AV HK+ HPN+ L++ +++ + GG L
Sbjct: 66 EIAVLHKIKHPNIVALDDIYESGGHLYL----------------IMQLVSGGELFDRIVE 109
Query: 158 KTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENML---LDKNRTVKIA 214
K + + +L F+V+ + YLH IVHRD+K EN+L LD++ + I+
Sbjct: 110 KGFYTERDASRLIFQVL--------DAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMIS 161
Query: 215 DFGVARVEASNPND-MTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
DFG++++E +P ++ GT GY+APEVL PY++ D +S G+ + + C P+
Sbjct: 162 DFGLSKME--DPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFY 219
Query: 274 DLSFSEVTSAVVRQNLRPEIPRC--CPSSLANVMKRCWDANPDKR 316
D + +++ +++ + P S + ++ + +P+KR
Sbjct: 220 DENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKR 264
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 108/225 (48%), Gaps = 38/225 (16%)
Query: 104 EVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGAL------ 157
E+AV HK+ HPN+ L++ +++ + GG L
Sbjct: 66 EIAVLHKIKHPNIVALDDIYESGGHLYL----------------IMQLVSGGELFDRIVE 109
Query: 158 KTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENML---LDKNRTVKIA 214
K + + +L F+V+ + YLH IVHRD+K EN+L LD++ + I+
Sbjct: 110 KGFYTERDASRLIFQVL--------DAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMIS 161
Query: 215 DFGVARVEASNPND-MTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
DFG++++E +P ++ GT GY+APEVL PY++ D +S G+ + + C P+
Sbjct: 162 DFGLSKME--DPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFY 219
Query: 274 DLSFSEVTSAVVRQNLRPEIPRC--CPSSLANVMKRCWDANPDKR 316
D + +++ +++ + P S + ++ + +P+KR
Sbjct: 220 DENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKR 264
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 121/274 (44%), Gaps = 35/274 (12%)
Query: 54 IKSVIARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIA---ALRSAFTQEVAVW 108
+ ++ G VH R L DVAVK+L A++A + F +E
Sbjct: 16 LGEILGFGGMSEVHLARDLRLHRDVAVKVL---------RADLARDPSFYLRFRREAQNA 66
Query: 109 HKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSN-ICCVVVEYLPGGALKTYLIKNRRR 167
L+HP + + G+ P+ + +V+EY+ G L+ I +
Sbjct: 67 AALNHPAIVAVY-------------DTGEAETPAGPLPYIVMEYVDGVTLRD--IVHTEG 111
Query: 168 KLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPN 227
+ K +++ D + L++ H I+HRDVK N+++ VK+ DFG+AR A + N
Sbjct: 112 PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGN 171
Query: 228 DMTGETGTLG---YMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAV 284
+T +G Y++PE G+ + + DVYS G L+E+ + P+ S V
Sbjct: 172 SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQH 231
Query: 285 VRQNLRPEIPR--CCPSSLANVMKRCWDANPDKR 316
VR++ P R + L V+ + NP+ R
Sbjct: 232 VREDPIPPSARHEGLSADLDAVVLKALAKNPENR 265
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 121/274 (44%), Gaps = 35/274 (12%)
Query: 54 IKSVIARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIA---ALRSAFTQEVAVW 108
+ ++ G VH R L DVAVK+L A++A + F +E
Sbjct: 33 LGEILGFGGMSEVHLARDLRLHRDVAVKVL---------RADLARDPSFYLRFRREAQNA 83
Query: 109 HKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSN-ICCVVVEYLPGGALKTYLIKNRRR 167
L+HP + + G+ P+ + +V+EY+ G L+ I +
Sbjct: 84 AALNHPAIVAVY-------------DTGEAETPAGPLPYIVMEYVDGVTLRD--IVHTEG 128
Query: 168 KLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPN 227
+ K +++ D + L++ H I+HRDVK N+++ VK+ DFG+AR A + N
Sbjct: 129 PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGN 188
Query: 228 DMTGETGTLG---YMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAV 284
+T +G Y++PE G+ + + DVYS G L+E+ + P+ S V
Sbjct: 189 SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQH 248
Query: 285 VRQNLRPEIPR--CCPSSLANVMKRCWDANPDKR 316
VR++ P R + L V+ + NP+ R
Sbjct: 249 VREDPIPPSARHEGLSADLDAVVLKALAKNPENR 282
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 126/271 (46%), Gaps = 35/271 (12%)
Query: 58 IARGTFGTVHRGL--YDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPN 115
I +G GTV+ + G +VA++ ++ ++ + E+ V + +PN
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK---------ELIINEILVMRENKNPN 78
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVV 175
+ ++ + + EL VV+EYL GG+L + + + V
Sbjct: 79 IVNYLDSYLVGDEL----------------WVVMEYLAGGSLTDVVTETCMDEGQIAAVC 122
Query: 176 QLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETGT 235
+ L + L +LHS +++HRD+K++N+LL + +VK+ DFG + + GT
Sbjct: 123 RECL---QALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGT 179
Query: 236 LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA-VVRQNLRPEI- 293
+MAPEV+ Y K D++S GI E+ + PY L+ + + + ++ N PE+
Sbjct: 180 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY--LNENPLRALYLIATNGTPELQ 237
Query: 294 -PRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
P + + + RC + + +KR E++
Sbjct: 238 NPEKLSAIFRDFLNRCLEMDVEKRGSAKELL 268
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 120/274 (43%), Gaps = 35/274 (12%)
Query: 54 IKSVIARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIA---ALRSAFTQEVAVW 108
+ ++ G VH R L DVAVK+L A++A + F +E
Sbjct: 16 LGEILGFGGMSEVHLARDLRLHRDVAVKVL---------RADLARDPSFYLRFRREAQNA 66
Query: 109 HKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSN-ICCVVVEYLPGGALKTYLIKNRRR 167
L+HP + G+ P+ + +V+EY+ G L+ I +
Sbjct: 67 AALNHPAIVAVYA-------------TGEAETPAGPLPYIVMEYVDGVTLRD--IVHTEG 111
Query: 168 KLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPN 227
+ K +++ D + L++ H I+HRDVK N+++ VK+ DFG+AR A + N
Sbjct: 112 PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGN 171
Query: 228 DMTGETGTLG---YMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAV 284
+T +G Y++PE G+ + + DVYS G L+E+ + P+ S V
Sbjct: 172 SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQH 231
Query: 285 VRQNLRPEIPR--CCPSSLANVMKRCWDANPDKR 316
VR++ P R + L V+ + NP+ R
Sbjct: 232 VREDPIPPSARHEGLSADLDAVVLKALAKNPENR 265
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 124/269 (46%), Gaps = 34/269 (12%)
Query: 58 IARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPN 115
+ +G FG V+ R VA+K+L +++ E + +E+ + L HPN
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVL------FKSQIEKEGVEHQLRREIEIQAHLHHPN 84
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAF--KV 173
+ + +++ ++EY P G L K ++ F +
Sbjct: 85 ILRLYNYFYDRRRIYL----------------ILEYAPRGEL----YKELQKSCTFDEQR 124
Query: 174 VVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGET 233
+ +LA L Y H +K++HRD+K EN+LL +KIADFG + V A + T
Sbjct: 125 TATIMEELADALMYCHGKKVIHRDIKPENLLLGLKGELKIADFGWS-VHAPSLRRKTM-C 182
Query: 234 GTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEI 293
GTL Y+ PE++ G +N K D++ G+ +E+ + P+ S +E +V+ +L+
Sbjct: 183 GTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLK--F 240
Query: 294 PRCCPSSLANVMKRCWDANPDKRPEMDEV 322
P P+ +++ + NP +R + +V
Sbjct: 241 PASVPTGAQDLISKLLRHNPSERLPLAQV 269
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 107/217 (49%), Gaps = 31/217 (14%)
Query: 58 IARGTFGTVH--RGLYDGHDVAVKLLDW--GEEGHRTEAEIAALRSAFTQEVAVWHKLD- 112
I G +GTV+ R + GH VA+K + GEEG L + +EVA+ +L+
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEG---------LPISTVREVALLRRLEA 62
Query: 113 --HPNVTKFIGATMGS-SELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKL 169
HPNV + + S ++ I+ +V E++ L+TYL K L
Sbjct: 63 FEHPNVVRLMDVCATSRTDREIK------------VTLVFEHV-DQDLRTYLDKAPPPGL 109
Query: 170 AFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDM 229
+ + L RGL +LH+ IVHRD+K EN+L+ TVK+ADFG+AR+ S +
Sbjct: 110 PAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARI-YSYQMAL 168
Query: 230 TGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIY 266
TL Y APEVL + Y D++S G E++
Sbjct: 169 APVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 97/180 (53%), Gaps = 23/180 (12%)
Query: 96 ALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGG 155
A+R+ +E+ V H+ + P + F GA E+ +IC +E++ GG
Sbjct: 56 AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEI-------------SIC---MEHMDGG 99
Query: 156 ALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQ-KIVHRDVKTENMLLDKNRTVKIA 214
+L L + +R + +++ ++++ + RGL+YL + +I+HRDVK N+L++ +K+
Sbjct: 100 SLDQVLKEAKR--IPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLC 157
Query: 215 DFGVA-RVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
DFGV+ ++ S N G T YMAPE L G Y+ + D++S G+ L E+ P P
Sbjct: 158 DFGVSGQLIDSMANSFVG---TRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPIP 214
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 120/272 (44%), Gaps = 27/272 (9%)
Query: 54 IKSVIARGTFGTVHRG--LYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKL 111
+ +++ +G+F V+R ++ G +VA+K++D + A + EV + +L
Sbjct: 15 VGNLLGKGSFAGVYRAESIHTGLEVAIKMID------KKAMYKAGMVQRVQNEVKIHCQL 68
Query: 112 DHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAF 171
HP++ EL+ E+ SN +V+E G + YL KNR + +
Sbjct: 69 KHPSIL----------ELYNYFED------SNYVYLVLEMCHNGEMNRYL-KNRVKPFSE 111
Query: 172 KVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTG 231
+ G+ YLHS I+HRD+ N+LL +N +KIADFG+A
Sbjct: 112 NEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT 171
Query: 232 ETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRP 291
GT Y++PE+ + + + DV+S G + + P+ + + VV +
Sbjct: 172 LCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADY-- 229
Query: 292 EIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
E+P +++ + NP R + V+
Sbjct: 230 EMPSFLSIEAKDLIHQLLRRNPADRLSLSSVL 261
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 107/217 (49%), Gaps = 31/217 (14%)
Query: 58 IARGTFGTVH--RGLYDGHDVAVKLLDW--GEEGHRTEAEIAALRSAFTQEVAVWHKLD- 112
I G +GTV+ R + GH VA+K + GEEG L + +EVA+ +L+
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEG---------LPISTVREVALLRRLEA 62
Query: 113 --HPNVTKFIGATMGS-SELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKL 169
HPNV + + S ++ I+ +V E++ L+TYL K L
Sbjct: 63 FEHPNVVRLMDVCATSRTDREIK------------VTLVFEHV-DQDLRTYLDKAPPPGL 109
Query: 170 AFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDM 229
+ + L RGL +LH+ IVHRD+K EN+L+ TVK+ADFG+AR+ S +
Sbjct: 110 PAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARI-YSYQMAL 168
Query: 230 TGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIY 266
TL Y APEVL + Y D++S G E++
Sbjct: 169 DPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 107/217 (49%), Gaps = 31/217 (14%)
Query: 58 IARGTFGTVH--RGLYDGHDVAVKLLDW--GEEGHRTEAEIAALRSAFTQEVAVWHKLD- 112
I G +GTV+ R + GH VA+K + GEEG L + +EVA+ +L+
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEG---------LPISTVREVALLRRLEA 62
Query: 113 --HPNVTKFIGATMGS-SELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKL 169
HPNV + + S ++ I+ +V E++ L+TYL K L
Sbjct: 63 FEHPNVVRLMDVCATSRTDREIK------------VTLVFEHV-DQDLRTYLDKAPPPGL 109
Query: 170 AFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDM 229
+ + L RGL +LH+ IVHRD+K EN+L+ TVK+ADFG+AR+ S +
Sbjct: 110 PAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARI-YSYQMAL 168
Query: 230 TGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIY 266
TL Y APEVL + Y D++S G E++
Sbjct: 169 FPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 131/290 (45%), Gaps = 53/290 (18%)
Query: 56 SVIARGTFGTV--HRGLYDGHDVAVKLLDWGEEGHRT-EAEIAALRSAFTQEVAVWHK-- 110
+V+ +G FG V R D A+K + EE T +E+ L S Q V ++
Sbjct: 12 AVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAW 71
Query: 111 LDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLA 170
L+ N K + A S L IQ E + + + + L N++R
Sbjct: 72 LERRNFVKPMTAVKKKSTLFIQMEYCE-------NRTLYDLIHSENL------NQQRDEY 118
Query: 171 FKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVA----------R 220
+++ Q+ LSY+HSQ I+HRD+K N+ +D++R VKI DFG+A +
Sbjct: 119 WRLFRQIL----EALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILK 174
Query: 221 VEASN----PNDMTGETGTLGYMAPEVLNGN-PYNRKCDVYSFGICLWEIYCCDMPYPDL 275
+++ N +++T GT Y+A EVL+G YN K D+YS GI +E M YP
Sbjct: 175 LDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFE-----MIYP-- 227
Query: 276 SFSEVTSAV-VRQNLRPEIPRCCPSSLANVMK-------RCWDANPDKRP 317
FS V + + LR P N MK D +P+KRP
Sbjct: 228 -FSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRP 276
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 126/271 (46%), Gaps = 35/271 (12%)
Query: 58 IARGTFGTVHRGL--YDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPN 115
I +G GTV+ + G +VA++ ++ ++ + E+ V + +PN
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK---------ELIINEILVMRENKNPN 79
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVV 175
+ ++ + + EL VV+EYL GG+L + + + V
Sbjct: 80 IVNYLDSYLVGDEL----------------WVVMEYLAGGSLTDVVTETCMDEGQIAAVC 123
Query: 176 QLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETGT 235
+ L + L +LHS +++HR++K++N+LL + +VK+ DFG + + GT
Sbjct: 124 RECL---QALEFLHSNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGT 180
Query: 236 LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA-VVRQNLRPEI- 293
+MAPEV+ Y K D++S GI E+ + PY L+ + + + ++ N PE+
Sbjct: 181 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY--LNENPLRALYLIATNGTPELQ 238
Query: 294 -PRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
P + + + RC + + +KR E++
Sbjct: 239 NPEKLSAIFRDFLNRCLEMDVEKRGSAKELI 269
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 105/227 (46%), Gaps = 35/227 (15%)
Query: 58 IARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPN 115
+ RG FG V + D + A+K + E+A R +EV KL+HP
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNR------ELA--REKVMREVKALAKLEHPG 64
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYL-----IKNRRRKLA 170
+ ++ A + + TE Q + P + ++ LK ++ I+ R R +
Sbjct: 65 IVRYFNAWLEKN----TTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVC 120
Query: 171 FKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMT 230
+ +Q+A + +LHS+ ++HRD+K N+ + VK+ DFG+ + + T
Sbjct: 121 LHIFLQIA----EAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQT 176
Query: 231 ------------GETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEI 265
G+ GT YM+PE ++GN Y+ K D++S G+ L+E+
Sbjct: 177 VLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFEL 223
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 92/190 (48%), Gaps = 25/190 (13%)
Query: 99 SAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALK 158
S +EVAV LDHPN+ K ++ V+E GG L
Sbjct: 81 SKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYL----------------VMECYKGGELF 124
Query: 159 TYLI-KNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLL---DKNRTVKIA 214
+I + + ++ V+++ L G++YLH IVHRD+K EN+LL +K+ +KI
Sbjct: 125 DEIIHRMKFNEVDAAVIIKQVL---SGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIV 181
Query: 215 DFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPD 274
DFG++ V N M GT Y+APEVL Y+ KCDV+S G+ L+ + P+
Sbjct: 182 DFGLSAV-FENQKKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGG 239
Query: 275 LSFSEVTSAV 284
+ E+ V
Sbjct: 240 QTDQEILRKV 249
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 96/180 (53%), Gaps = 23/180 (12%)
Query: 96 ALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGG 155
A+R+ +E+ V H+ + P + F GA E+ +IC +E++ GG
Sbjct: 108 AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEI-------------SIC---MEHMDGG 151
Query: 156 ALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQ-KIVHRDVKTENMLLDKNRTVKIA 214
+L L K R + +++ ++++ + +GL+YL + KI+HRDVK N+L++ +K+
Sbjct: 152 SLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLC 209
Query: 215 DFGVA-RVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
DFGV+ ++ S N GT YM+PE L G Y+ + D++S G+ L E+ P P
Sbjct: 210 DFGVSGQLIDSMANSF---VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIP 266
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 96/180 (53%), Gaps = 23/180 (12%)
Query: 96 ALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGG 155
A+R+ +E+ V H+ + P + F GA E+ +IC +E++ GG
Sbjct: 73 AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEI-------------SIC---MEHMDGG 116
Query: 156 ALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQ-KIVHRDVKTENMLLDKNRTVKIA 214
+L L K R + +++ ++++ + +GL+YL + KI+HRDVK N+L++ +K+
Sbjct: 117 SLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLC 174
Query: 215 DFGVA-RVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
DFGV+ ++ S N GT YM+PE L G Y+ + D++S G+ L E+ P P
Sbjct: 175 DFGVSGQLIDSMANSF---VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIP 231
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 112/228 (49%), Gaps = 35/228 (15%)
Query: 57 VIARGTFGTVHRGLY--DGHDVAVKLLD-WGEEGHRTEAEIAALRSAFTQEVAVWHKLDH 113
++ GT+G V++G + G A+K++D G+E + EI L+ H
Sbjct: 31 LVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYS----------HH 80
Query: 114 PNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRR-RKLAFK 172
N+ + GA + + + + +V+E+ G++ T LIKN + L +
Sbjct: 81 RNIATYYGAFIKKNPPGMDDQ----------LWLVMEFCGAGSV-TDLIKNTKGNTLKEE 129
Query: 173 VVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGE 232
+ + ++ RGLS+LH K++HRD+K +N+LL +N VK+ DFGV+
Sbjct: 130 WIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTF 189
Query: 233 TGTLGYMAPEVL--NGNP---YNRKCDVYSFGICLWEIY-----CCDM 270
GT +MAPEV+ + NP Y+ K D++S GI E+ CDM
Sbjct: 190 IGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDM 237
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 96/180 (53%), Gaps = 23/180 (12%)
Query: 96 ALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGG 155
A+R+ +E+ V H+ + P + F GA E+ +IC +E++ GG
Sbjct: 46 AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEI-------------SIC---MEHMDGG 89
Query: 156 ALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQ-KIVHRDVKTENMLLDKNRTVKIA 214
+L L K R + +++ ++++ + +GL+YL + KI+HRDVK N+L++ +K+
Sbjct: 90 SLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLC 147
Query: 215 DFGVA-RVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
DFGV+ ++ S N GT YM+PE L G Y+ + D++S G+ L E+ P P
Sbjct: 148 DFGVSGQLIDSMANSF---VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIP 204
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 86/170 (50%), Gaps = 4/170 (2%)
Query: 147 VVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLD 206
V+EY+ GG L ++ + R K V A ++A GL +L S+ I++RD+K +N++LD
Sbjct: 98 FVMEYVNGGDLMYHIQQVGRFKEPHAVF--YAAEIAIGLFFLQSKGIIYRDLKLDNVMLD 155
Query: 207 KNRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIY 266
+KIADFG+ + + GT Y+APE++ PY + D ++FG+ L+E+
Sbjct: 156 SEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEML 215
Query: 267 CCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
P+ E+ +++ N+ P+ + K +P KR
Sbjct: 216 AGQAPFEGEDEDELFQSIMEHNV--AYPKSMSKEAVAICKGLMTKHPGKR 263
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 86/170 (50%), Gaps = 4/170 (2%)
Query: 147 VVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLD 206
V+EY+ GG L ++ + R K V A ++A GL +L S+ I++RD+K +N++LD
Sbjct: 419 FVMEYVNGGDLMYHIQQVGRFKEPHAVF--YAAEIAIGLFFLQSKGIIYRDLKLDNVMLD 476
Query: 207 KNRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIY 266
+KIADFG+ + + GT Y+APE++ PY + D ++FG+ L+E+
Sbjct: 477 SEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEML 536
Query: 267 CCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
P+ E+ +++ N+ P+ + K +P KR
Sbjct: 537 AGQAPFEGEDEDELFQSIMEHNV--AYPKSMSKEAVAICKGLMTKHPGKR 584
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 107/231 (46%), Gaps = 27/231 (11%)
Query: 100 AFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKT 159
A EVAV +LDHPN+ K L+ E+ + N V+ Y G
Sbjct: 50 ALLDEVAVLKQLDHPNIMK----------LYEFFEDKR-----NYYLVMEVYRGGELFDE 94
Query: 160 YLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLD---KNRTVKIADF 216
+++ + ++ V+++ L G +YLH IVHRD+K EN+LL+ ++ +KI DF
Sbjct: 95 IILRQKFSEVDAAVIMKQVLS---GTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDF 151
Query: 217 GV-ARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDL 275
G+ A E M GT Y+APEVL Y+ KCDV+S G+ L+ + C P+
Sbjct: 152 GLSAHFEVGGK--MKERLGTAYYIAPEVLR-KKYDEKCDVWSCGVILYILLCGYPPFGGQ 208
Query: 276 SFSEVTSAVVRQNLRPEIPRCCPSS--LANVMKRCWDANPDKRPEMDEVVS 324
+ E+ V + + P S ++K P KR +E ++
Sbjct: 209 TDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEPSKRISAEEALN 259
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 117/257 (45%), Gaps = 39/257 (15%)
Query: 73 GHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQ 132
G VAVK +D ++ R EV + H NV + + + EL
Sbjct: 54 GKLVAVKKMDLRKQQRR---------ELLFNEVVIMRDYQHENVVEMYNSYLVGDEL--- 101
Query: 133 TENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQK 192
VV+E+L GGAL + R + + + + L + + LS LH+Q
Sbjct: 102 -------------WVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQG 145
Query: 193 IVHRDVKTENMLLDKNRTVKIADFGV-ARVEASNPNDMTGETGTLGYMAPEVLNGNPYNR 251
++HRD+K++++LL + VK++DFG A+V P GT +MAPE+++ PY
Sbjct: 146 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR-KXLVGTPYWMAPELISRLPYGP 204
Query: 252 KCDVYSFGICLWEIYCCDMPYPDLSFSEV---TSAVVRQNLRPEIPRC--CPSSLANVMK 306
+ D++S GI + E+ + PY F+E ++R NL P + SL +
Sbjct: 205 EVDIWSLGIMVIEMVDGEPPY----FNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLD 260
Query: 307 RCWDANPDKRPEMDEVV 323
R +P +R E++
Sbjct: 261 RLLVRDPAQRATAAELL 277
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 117/257 (45%), Gaps = 39/257 (15%)
Query: 73 GHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQ 132
G VAVK +D ++ R EV + H NV + + + EL
Sbjct: 56 GKLVAVKKMDLRKQQRR---------ELLFNEVVIMRDYQHENVVEMYNSYLVGDEL--- 103
Query: 133 TENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQK 192
VV+E+L GGAL + R + + + + L + + LS LH+Q
Sbjct: 104 -------------WVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQG 147
Query: 193 IVHRDVKTENMLLDKNRTVKIADFGV-ARVEASNPNDMTGETGTLGYMAPEVLNGNPYNR 251
++HRD+K++++LL + VK++DFG A+V P GT +MAPE+++ PY
Sbjct: 148 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR-KXLVGTPYWMAPELISRLPYGP 206
Query: 252 KCDVYSFGICLWEIYCCDMPYPDLSFSEV---TSAVVRQNLRPEIPRC--CPSSLANVMK 306
+ D++S GI + E+ + PY F+E ++R NL P + SL +
Sbjct: 207 EVDIWSLGIMVIEMVDGEPPY----FNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLD 262
Query: 307 RCWDANPDKRPEMDEVV 323
R +P +R E++
Sbjct: 263 RLLVRDPAQRATAAELL 279
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 96/180 (53%), Gaps = 23/180 (12%)
Query: 96 ALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGG 155
A+R+ +E+ V H+ + P + F GA E+ +IC +E++ GG
Sbjct: 46 AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEI-------------SIC---MEHMDGG 89
Query: 156 ALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQ-KIVHRDVKTENMLLDKNRTVKIA 214
+L L K R + +++ ++++ + +GL+YL + KI+HRDVK N+L++ +K+
Sbjct: 90 SLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLC 147
Query: 215 DFGVA-RVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
DFGV+ ++ S N GT YM+PE L G Y+ + D++S G+ L E+ P P
Sbjct: 148 DFGVSGQLIDSMANSF---VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIP 204
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 117/257 (45%), Gaps = 39/257 (15%)
Query: 73 GHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQ 132
G VAVK +D ++ R EV + H NV + + + EL
Sbjct: 99 GKLVAVKKMDLRKQQRR---------ELLFNEVVIMRDYQHENVVEMYNSYLVGDEL--- 146
Query: 133 TENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQK 192
VV+E+L GGAL + R + + + + L + + LS LH+Q
Sbjct: 147 -------------WVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQG 190
Query: 193 IVHRDVKTENMLLDKNRTVKIADFGV-ARVEASNPNDMTGETGTLGYMAPEVLNGNPYNR 251
++HRD+K++++LL + VK++DFG A+V P GT +MAPE+++ PY
Sbjct: 191 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR-KXLVGTPYWMAPELISRLPYGP 249
Query: 252 KCDVYSFGICLWEIYCCDMPYPDLSFSEV---TSAVVRQNLRPEIPRC--CPSSLANVMK 306
+ D++S GI + E+ + PY F+E ++R NL P + SL +
Sbjct: 250 EVDIWSLGIMVIEMVDGEPPY----FNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLD 305
Query: 307 RCWDANPDKRPEMDEVV 323
R +P +R E++
Sbjct: 306 RLLVRDPAQRATAAELL 322
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 117/257 (45%), Gaps = 39/257 (15%)
Query: 73 GHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQ 132
G VAVK +D ++ R EV + H NV + + + EL
Sbjct: 49 GKLVAVKKMDLRKQQRR---------ELLFNEVVIMRDYQHENVVEMYNSYLVGDEL--- 96
Query: 133 TENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQK 192
VV+E+L GGAL + R + + + + L + + LS LH+Q
Sbjct: 97 -------------WVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQG 140
Query: 193 IVHRDVKTENMLLDKNRTVKIADFGV-ARVEASNPNDMTGETGTLGYMAPEVLNGNPYNR 251
++HRD+K++++LL + VK++DFG A+V P GT +MAPE+++ PY
Sbjct: 141 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR-KXLVGTPYWMAPELISRLPYGP 199
Query: 252 KCDVYSFGICLWEIYCCDMPYPDLSFSE---VTSAVVRQNLRPEIPRC--CPSSLANVMK 306
+ D++S GI + E+ + PY F+E ++R NL P + SL +
Sbjct: 200 EVDIWSLGIMVIEMVDGEPPY----FNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLD 255
Query: 307 RCWDANPDKRPEMDEVV 323
R +P +R E++
Sbjct: 256 RLLVRDPAQRATAAELL 272
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 96/180 (53%), Gaps = 23/180 (12%)
Query: 96 ALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGG 155
A+R+ +E+ V H+ + P + F GA E+ +IC +E++ GG
Sbjct: 46 AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEI-------------SIC---MEHMDGG 89
Query: 156 ALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQ-KIVHRDVKTENMLLDKNRTVKIA 214
+L L K R + +++ ++++ + +GL+YL + KI+HRDVK N+L++ +K+
Sbjct: 90 SLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLC 147
Query: 215 DFGVA-RVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
DFGV+ ++ S N GT YM+PE L G Y+ + D++S G+ L E+ P P
Sbjct: 148 DFGVSGQLIDSMANSF---VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIP 204
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 96/180 (53%), Gaps = 23/180 (12%)
Query: 96 ALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGG 155
A+R+ +E+ V H+ + P + F GA E+ +IC +E++ GG
Sbjct: 46 AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEI-------------SIC---MEHMDGG 89
Query: 156 ALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQ-KIVHRDVKTENMLLDKNRTVKIA 214
+L L K R + +++ ++++ + +GL+YL + KI+HRDVK N+L++ +K+
Sbjct: 90 SLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLC 147
Query: 215 DFGVA-RVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
DFGV+ ++ S N GT YM+PE L G Y+ + D++S G+ L E+ P P
Sbjct: 148 DFGVSGQLIDSMANSF---VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIP 204
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 117/257 (45%), Gaps = 39/257 (15%)
Query: 73 GHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQ 132
G VAVK +D ++ R EV + H NV + + + EL
Sbjct: 45 GKLVAVKKMDLRKQQRR---------ELLFNEVVIMRDYQHENVVEMYNSYLVGDEL--- 92
Query: 133 TENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQK 192
VV+E+L GGAL + R + + + + L + + LS LH+Q
Sbjct: 93 -------------WVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQG 136
Query: 193 IVHRDVKTENMLLDKNRTVKIADFGV-ARVEASNPNDMTGETGTLGYMAPEVLNGNPYNR 251
++HRD+K++++LL + VK++DFG A+V P GT +MAPE+++ PY
Sbjct: 137 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR-KXLVGTPYWMAPELISRLPYGP 195
Query: 252 KCDVYSFGICLWEIYCCDMPYPDLSFSEV---TSAVVRQNLRPEIPRC--CPSSLANVMK 306
+ D++S GI + E+ + PY F+E ++R NL P + SL +
Sbjct: 196 EVDIWSLGIMVIEMVDGEPPY----FNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLD 251
Query: 307 RCWDANPDKRPEMDEVV 323
R +P +R E++
Sbjct: 252 RLLVRDPAQRATAAELL 268
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 118/265 (44%), Gaps = 29/265 (10%)
Query: 48 EPSKLVIKSVIARGTFGTVHRGLYDGHDV--AVKLLDWGE-EGHRTEAEIAALRSAFTQE 104
+PS VI +G+FG V + +V AVK+L + E I + R+ +
Sbjct: 36 KPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKN 95
Query: 105 VAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKN 164
V HP + + + +L+ V++Y+ GG L +L
Sbjct: 96 VK------HPFLVGLHFSFQTADKLYF----------------VLDYINGGELFYHL--Q 131
Query: 165 RRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEAS 224
R R A ++A L YLHS IV+RD+K EN+LLD + + DFG+ +
Sbjct: 132 RERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIE 191
Query: 225 NPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAV 284
+ + + GT Y+APEVL+ PY+R D + G L+E+ P+ + +E+ +
Sbjct: 192 HNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNI 251
Query: 285 VRQ--NLRPEIPRCCPSSLANVMKR 307
+ + L+P I L ++++
Sbjct: 252 LNKPLQLKPNITNSARHLLEGLLQK 276
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 107/231 (46%), Gaps = 27/231 (11%)
Query: 100 AFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKT 159
A EVAV +LDHPN+ K L+ E+ + N V+ Y G
Sbjct: 67 ALLDEVAVLKQLDHPNIMK----------LYEFFEDKR-----NYYLVMEVYRGGELFDE 111
Query: 160 YLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLD---KNRTVKIADF 216
+++ + ++ V+++ L G +YLH IVHRD+K EN+LL+ ++ +KI DF
Sbjct: 112 IILRQKFSEVDAAVIMKQVLS---GTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDF 168
Query: 217 GV-ARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDL 275
G+ A E M GT Y+APEVL Y+ KCDV+S G+ L+ + C P+
Sbjct: 169 GLSAHFEVGGK--MKERLGTAYYIAPEVLR-KKYDEKCDVWSCGVILYILLCGYPPFGGQ 225
Query: 276 SFSEVTSAVVRQNLRPEIPRCCPSS--LANVMKRCWDANPDKRPEMDEVVS 324
+ E+ V + + P S ++K P KR +E ++
Sbjct: 226 TDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEPSKRISAEEALN 276
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 117/257 (45%), Gaps = 39/257 (15%)
Query: 73 GHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQ 132
G VAVK +D ++ R EV + H NV + + + EL
Sbjct: 176 GKLVAVKKMDLRKQQRR---------ELLFNEVVIMRDYQHENVVEMYNSYLVGDEL--- 223
Query: 133 TENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQK 192
VV+E+L GGAL + R + + + + L + + LS LH+Q
Sbjct: 224 -------------WVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQG 267
Query: 193 IVHRDVKTENMLLDKNRTVKIADFGV-ARVEASNPNDMTGETGTLGYMAPEVLNGNPYNR 251
++HRD+K++++LL + VK++DFG A+V P GT +MAPE+++ PY
Sbjct: 268 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR-RKXLVGTPYWMAPELISRLPYGP 326
Query: 252 KCDVYSFGICLWEIYCCDMPYPDLSFSEV---TSAVVRQNLRPEIPRC--CPSSLANVMK 306
+ D++S GI + E+ + PY F+E ++R NL P + SL +
Sbjct: 327 EVDIWSLGIMVIEMVDGEPPY----FNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLD 382
Query: 307 RCWDANPDKRPEMDEVV 323
R +P +R E++
Sbjct: 383 RLLVRDPAQRATAAELL 399
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 104/215 (48%), Gaps = 24/215 (11%)
Query: 58 IARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLD--- 112
I G +GTV+ R + GH VA+K + L + +EVA+ +L+
Sbjct: 17 IGVGAYGTVYKARDPHSGHFVALKSV----RVPNGGGGGGGLPISTVREVALLRRLEAFE 72
Query: 113 HPNVTKFIGATMGS-SELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAF 171
HPNV + + S ++ I+ +V E++ L+TYL K L
Sbjct: 73 HPNVVRLMDVCATSRTDREIK------------VTLVFEHV-DQDLRTYLDKAPPPGLPA 119
Query: 172 KVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTG 231
+ + L RGL +LH+ IVHRD+K EN+L+ TVK+ADFG+AR+ S +T
Sbjct: 120 ETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARI-YSYQMALTP 178
Query: 232 ETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIY 266
TL Y APEVL + Y D++S G E++
Sbjct: 179 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 213
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 102/217 (47%), Gaps = 30/217 (13%)
Query: 58 IARGTFGTV--HRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPN 115
I G+ G V R + G VAVK++D ++ R EV + H N
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRR---------ELLFNEVVIMRDYQHFN 103
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVV 175
V + + + EL V++E+L GGAL + + R + V
Sbjct: 104 VVEMYKSYLVGEEL----------------WVLMEFLQGGALTDIVSQVRLNEEQIATVC 147
Query: 176 QLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETGT 235
+ L + L+YLH+Q ++HRD+K++++LL + VK++DFG + + GT
Sbjct: 148 EAVL---QALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGT 204
Query: 236 LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPY 272
+MAPEV++ + Y + D++S GI + E+ + PY
Sbjct: 205 PYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPY 241
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 80/182 (43%), Gaps = 23/182 (12%)
Query: 94 IAALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLP 153
I E+++ LDHPN+ K ++ V E+
Sbjct: 86 IEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYL----------------VTEFYE 129
Query: 154 GGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRT--- 210
GG L +I R K + + G+ YLH IVHRD+K EN+LL+ +
Sbjct: 130 GGELFEQII--NRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLN 187
Query: 211 VKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDM 270
+KI DFG++ S + GT Y+APEVL YN KCDV+S G+ ++ + C
Sbjct: 188 IKIVDFGLSSF-FSKDYKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYP 245
Query: 271 PY 272
P+
Sbjct: 246 PF 247
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 105/221 (47%), Gaps = 27/221 (12%)
Query: 58 IARGTFGTVHRGL-YDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPNV 116
+ GT+G V++ G VA+K + R +AE + S +E+++ +L HPN+
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRI-------RLDAEDEGIPSTAIREISLLKELHHPNI 81
Query: 117 TKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVVQ 176
I I +E C +V LK L +N+ ++ +
Sbjct: 82 VSLIDV--------IHSER---------CLTLVFEFMEKDLKKVLDENKTGLQDSQIKIY 124
Query: 177 LALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETGTL 236
L L RG+++ H +I+HRD+K +N+L++ + +K+ADFG+AR T E TL
Sbjct: 125 L-YQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTL 183
Query: 237 GYMAPEVLNGN-PYNRKCDVYSFGICLWEIYCCDMPYPDLS 276
Y AP+VL G+ Y+ D++S G E+ +P ++
Sbjct: 184 WYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVT 224
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 105/221 (47%), Gaps = 27/221 (12%)
Query: 58 IARGTFGTVHRGL-YDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPNV 116
+ GT+G V++ G VA+K + R +AE + S +E+++ +L HPN+
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRI-------RLDAEDEGIPSTAIREISLLKELHHPNI 81
Query: 117 TKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVVQ 176
I I +E C +V LK L +N+ ++ +
Sbjct: 82 VSLIDV--------IHSER---------CLTLVFEFMEKDLKKVLDENKTGLQDSQIKIY 124
Query: 177 LALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETGTL 236
L L RG+++ H +I+HRD+K +N+L++ + +K+ADFG+AR T E TL
Sbjct: 125 L-YQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTL 183
Query: 237 GYMAPEVLNGN-PYNRKCDVYSFGICLWEIYCCDMPYPDLS 276
Y AP+VL G+ Y+ D++S G E+ +P ++
Sbjct: 184 WYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVT 224
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 112/229 (48%), Gaps = 33/229 (14%)
Query: 55 KSVIARGTFGTVHRGLY--DGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKL- 111
K VI RG V R ++ GH+ AVK+++ E E ++ +R A +E + ++
Sbjct: 99 KDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPE-QLEEVREATRRETHILRQVA 157
Query: 112 DHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAF 171
HP++ I + SS +V + + G L YL + + L+
Sbjct: 158 GHPHIITLIDSYESSS----------------FMFLVFDLMRKGELFDYLTE--KVALSE 199
Query: 172 KVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVA-RVEASNPNDMT 230
K + L +S+LH+ IVHRD+K EN+LLD N ++++DFG + +E P +
Sbjct: 200 KETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLE---PGEKL 256
Query: 231 GET-GTLGYMAPEVL-----NGNP-YNRKCDVYSFGICLWEIYCCDMPY 272
E GT GY+APE+L +P Y ++ D+++ G+ L+ + P+
Sbjct: 257 RELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPF 305
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 86/169 (50%), Gaps = 4/169 (2%)
Query: 148 VVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDK 207
V+EY+ GG L ++ + K V A +++ GL +LH + I++RD+K +N++LD
Sbjct: 98 VMEYVNGGDLMYHI--QQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLDS 155
Query: 208 NRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYC 267
+KIADFG+ + + GT Y+APE++ PY + D +++G+ L+E+
Sbjct: 156 EGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLA 215
Query: 268 CDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
P+ E+ +++ N+ P+ ++ K +P KR
Sbjct: 216 GQPPFDGEDEDELFQSIMEHNV--SYPKSLSKEAVSICKGLMTKHPAKR 262
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 144/315 (45%), Gaps = 49/315 (15%)
Query: 43 QDWEIEPSKLVIKSVIARGTFGTVHRG--LYDGHDVAVK-LLDWGEEGHRTEAEIAALRS 99
Q E+ +L ++ V+A G F V+ + G + A+K LL EE +R
Sbjct: 21 QTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNR---------- 70
Query: 100 AFTQEVAVWHKLD-HPNVTKFI-GATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGAL 157
A QEV KL HPN+ +F A++G E ++ GQ +++ L G L
Sbjct: 71 AIIQEVCFMKKLSGHPNIVQFCSAASIGKEE----SDTGQAEF------LLLTELCKGQL 120
Query: 158 KTYLIKNRRR-KLAFKVVVQLALDLARGLSYLHSQK--IVHRDVKTENMLLDKNRTVKIA 214
+L K R L+ V+++ R + ++H QK I+HRD+K EN+LL T+K+
Sbjct: 121 VEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLC 180
Query: 215 DFGVARVEASNPN-------------DMTGETGTLGYMAPEVLN---GNPYNRKCDVYSF 258
DFG A + P+ ++T T + Y PE+++ P K D+++
Sbjct: 181 DFGSATTISHYPDYSWSAQRRALVEEEITRNTTPM-YRTPEIIDLYSNFPIGEKQDIWAL 239
Query: 259 GICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPE 318
G L+ + P+ D + + + + ++ P + + ++++ NP++R
Sbjct: 240 GCILYLLCFRQHPFEDGAKLRIVNG--KYSIPPHDTQY--TVFHSLIRAMLQVNPEERLS 295
Query: 319 MDEVVSMLEAIDTSK 333
+ EVV L+ I ++
Sbjct: 296 IAEVVHQLQEIAAAR 310
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 103/228 (45%), Gaps = 31/228 (13%)
Query: 54 IKSVIARGTFGTVHRGLYD--GHDVAVKLLDWGEEGHRTEAEIAAL-RSAFTQEVAVWHK 110
+K + G FG V R ++ G VA+K + E++ R + E+ + K
Sbjct: 19 MKERLGTGGFGYVLRWIHQDTGEQVAIK---------QCRQELSPKNRERWCLEIQIMKK 69
Query: 111 LDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRK-- 168
L+HPNV G +L P+++ + +EY GG L+ YL N+
Sbjct: 70 LNHPNVVSAREVPDGLQKL----------APNDLPLLAMEYCEGGDLRKYL--NQFENCC 117
Query: 169 -LAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLD--KNRTV-KIADFGVARVEAS 224
L + L D++ L YLH +I+HRD+K EN++L R + KI D G A+ E
Sbjct: 118 GLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK-ELD 176
Query: 225 NPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPY 272
T GTL Y+APE+L Y D +SFG +E P+
Sbjct: 177 QGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 103/228 (45%), Gaps = 31/228 (13%)
Query: 54 IKSVIARGTFGTVHRGLYD--GHDVAVKLLDWGEEGHRTEAEIAAL-RSAFTQEVAVWHK 110
+K + G FG V R ++ G VA+K + E++ R + E+ + K
Sbjct: 18 MKERLGTGGFGYVLRWIHQDTGEQVAIK---------QCRQELSPKNRERWCLEIQIMKK 68
Query: 111 LDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRK-- 168
L+HPNV G +L P+++ + +EY GG L+ YL N+
Sbjct: 69 LNHPNVVSAREVPDGLQKL----------APNDLPLLAMEYCEGGDLRKYL--NQFENCC 116
Query: 169 -LAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLD--KNRTV-KIADFGVARVEAS 224
L + L D++ L YLH +I+HRD+K EN++L R + KI D G A+ E
Sbjct: 117 GLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK-ELD 175
Query: 225 NPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPY 272
T GTL Y+APE+L Y D +SFG +E P+
Sbjct: 176 QGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 105/230 (45%), Gaps = 40/230 (17%)
Query: 54 IKSVIARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKL 111
+ VI RG FG V R A+KLL E R+++ + F +E +
Sbjct: 79 VVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDS------AFFWEERDIMAFA 132
Query: 112 DHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGAL----KTYLIKNRRR 167
+ P V + A L++ V+EY+PGG L Y + +
Sbjct: 133 NSPWVVQLFCAFQDDKYLYM----------------VMEYMPGGDLVNLMSNYDVPEKWA 176
Query: 168 KLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGV-ARVEASNP 226
K + V LALD +HS ++HRDVK +NMLLDK+ +K+ADFG +++ +
Sbjct: 177 KF-YTAEVVLALDA------IHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGM 229
Query: 227 NDMTGETGTLGYMAPEVLNGNP----YNRKCDVYSFGICLWEIYCCDMPY 272
GT Y++PEVL Y R+CD +S G+ L+E+ D P+
Sbjct: 230 VHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPF 279
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 132/287 (45%), Gaps = 47/287 (16%)
Query: 56 SVIARGTFGTV--HRGLYDGHDVAVKLLDWGEEGHRT-EAEIAALRSAFTQEVAVWHK-- 110
+V+ +G FG V R D A+K + EE T +E+ L S Q V ++
Sbjct: 12 AVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYVVRYYAAW 71
Query: 111 LDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLA 170
L+ N K A S L IQ E + ++ + E L N++R
Sbjct: 72 LERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDL--IHSENL-----------NQQRDEY 118
Query: 171 FKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVA----------R 220
+++ Q+ LSY+HSQ I+HR++K N+ +D++R VKI DFG+A +
Sbjct: 119 WRLFRQIL----EALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILK 174
Query: 221 VEASN----PNDMTGETGTLGYMAPEVLNGN-PYNRKCDVYSFGICLWEIYCCDMPYPDL 275
+++ N +++T GT Y+A EVL+G YN K D YS GI +E YP
Sbjct: 175 LDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFE-----XIYPFS 229
Query: 276 SFSEVTSAVVR-QNLRPEIPRCCPSSLANVMKR----CWDANPDKRP 317
+ E + + + +++ E P + V K+ D +P+KRP
Sbjct: 230 TGXERVNILKKLRSVSIEFPPDFDDNKXKVEKKIIRLLIDHDPNKRP 276
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 69/129 (53%), Gaps = 2/129 (1%)
Query: 146 CVVVEYLPGGALKTYLIKNRRRKLAFKV--VVQLALDLARGLSYLHSQKIVHRDVKTENM 203
C+V+ + GG ++ ++ F+ + + GL +LH + I++RD+K EN+
Sbjct: 261 CLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENV 320
Query: 204 LLDKNRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLW 263
LLD + V+I+D G+A + G GT G+MAPE+L G Y+ D ++ G+ L+
Sbjct: 321 LLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLY 380
Query: 264 EIYCCDMPY 272
E+ P+
Sbjct: 381 EMIAARGPF 389
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 69/129 (53%), Gaps = 2/129 (1%)
Query: 146 CVVVEYLPGGALKTYLIKNRRRKLAFKV--VVQLALDLARGLSYLHSQKIVHRDVKTENM 203
C+V+ + GG ++ ++ F+ + + GL +LH + I++RD+K EN+
Sbjct: 261 CLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENV 320
Query: 204 LLDKNRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLW 263
LLD + V+I+D G+A + G GT G+MAPE+L G Y+ D ++ G+ L+
Sbjct: 321 LLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLY 380
Query: 264 EIYCCDMPY 272
E+ P+
Sbjct: 381 EMIAARGPF 389
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 69/129 (53%), Gaps = 2/129 (1%)
Query: 146 CVVVEYLPGGALKTYLIKNRRRKLAFKV--VVQLALDLARGLSYLHSQKIVHRDVKTENM 203
C+V+ + GG ++ ++ F+ + + GL +LH + I++RD+K EN+
Sbjct: 261 CLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENV 320
Query: 204 LLDKNRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLW 263
LLD + V+I+D G+A + G GT G+MAPE+L G Y+ D ++ G+ L+
Sbjct: 321 LLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLY 380
Query: 264 EIYCCDMPY 272
E+ P+
Sbjct: 381 EMIAARGPF 389
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 104/217 (47%), Gaps = 30/217 (13%)
Query: 58 IARGTFGTVH--RGLYDG-HDVAVKLL--DWGEEGH--RTEAEIAALRSAFTQEVAVWHK 110
I G +G V R L +G VA+K + GEEG T E+A LR T
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLET-------- 70
Query: 111 LDHPNVTKFIGA-TMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKL 169
+HPNV + T+ ++ + +V E++ L TYL K +
Sbjct: 71 FEHPNVVRLFDVCTVSRTDRETK------------LTLVFEHV-DQDLTTYLDKVPEPGV 117
Query: 170 AFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDM 229
+ + + L RGL +LHS ++VHRD+K +N+L+ + +K+ADFG+AR+ S +
Sbjct: 118 PTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARI-YSFQMAL 176
Query: 230 TGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIY 266
T TL Y APEVL + Y D++S G E++
Sbjct: 177 TSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 106/224 (47%), Gaps = 26/224 (11%)
Query: 99 SAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALK 158
S+ E+AV K+ H N+ + L++ V++ + GG L
Sbjct: 65 SSIENEIAVLRKIKHENIVALEDIYESPNHLYL----------------VMQLVSGGELF 108
Query: 159 TYLI-KNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLL---DKNRTVKIA 214
++ K + +++ LD + YLH IVHRD+K EN+L D+ + I+
Sbjct: 109 DRIVEKGFYTEKDASTLIRQVLD---AVYYLHRMGIVHRDLKPENLLYYSQDEESKIMIS 165
Query: 215 DFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPD 274
DFG++++E + M+ GT GY+APEVL PY++ D +S G+ + + C P+ D
Sbjct: 166 DFGLSKMEGKG-DVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYD 224
Query: 275 LSFSEVTSAVVRQNLRPEIPRC--CPSSLANVMKRCWDANPDKR 316
+ S++ +++ + P S + ++ + +P+KR
Sbjct: 225 ENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPNKR 268
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 97/223 (43%), Gaps = 27/223 (12%)
Query: 57 VIARGTFGTVHRGL--YDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHP 114
VI +G F V R + G AVK++D + L+ +E ++ H L HP
Sbjct: 31 VIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLK----REASICHMLKHP 86
Query: 115 NVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFK-- 172
++ + L + +G + M V E++ G L ++K +
Sbjct: 87 HIVEL---------LETYSSDGMLYM-------VFEFMDGADLCFEIVKRADAGFVYSEA 130
Query: 173 VVVQLALDLARGLSYLHSQKIVHRDVKTENMLL---DKNRTVKIADFGVARVEASNPNDM 229
V + L Y H I+HRDVK EN+LL + + VK+ DFGVA +
Sbjct: 131 VASHYMRQILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVA 190
Query: 230 TGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPY 272
G GT +MAPEV+ PY + DV+ G+ L+ + +P+
Sbjct: 191 GGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 233
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 69/129 (53%), Gaps = 2/129 (1%)
Query: 146 CVVVEYLPGGALKTYLIKNRRRKLAFKV--VVQLALDLARGLSYLHSQKIVHRDVKTENM 203
C+V+ + GG ++ ++ F+ + + GL +LH + I++RD+K EN+
Sbjct: 261 CLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENV 320
Query: 204 LLDKNRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLW 263
LLD + V+I+D G+A + G GT G+MAPE+L G Y+ D ++ G+ L+
Sbjct: 321 LLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLY 380
Query: 264 EIYCCDMPY 272
E+ P+
Sbjct: 381 EMIAARGPF 389
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 69/127 (54%), Gaps = 1/127 (0%)
Query: 146 CVVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLL 205
C+V+ + GG LK ++ + V A ++ GL LH ++IV+RD+K EN+LL
Sbjct: 260 CLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILL 319
Query: 206 DKNRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEI 265
D + ++I+D G+A V + G GT+GYMAPEV+ Y D ++ G L+E+
Sbjct: 320 DDHGHIRISDLGLA-VHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEM 378
Query: 266 YCCDMPY 272
P+
Sbjct: 379 IAGQSPF 385
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 69/127 (54%), Gaps = 1/127 (0%)
Query: 146 CVVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLL 205
C+V+ + GG LK ++ + V A ++ GL LH ++IV+RD+K EN+LL
Sbjct: 260 CLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILL 319
Query: 206 DKNRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEI 265
D + ++I+D G+A V + G GT+GYMAPEV+ Y D ++ G L+E+
Sbjct: 320 DDHGHIRISDLGLA-VHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEM 378
Query: 266 YCCDMPY 272
P+
Sbjct: 379 IAGQSPF 385
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 103/216 (47%), Gaps = 28/216 (12%)
Query: 58 IARGTFGTVH--RGLYDG-HDVAVKLL--DWGEEGH--RTEAEIAALRSAFTQEVAVWHK 110
I G +G V R L +G VA+K + GEEG T E+A LR T
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLET-------- 70
Query: 111 LDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLA 170
+HPNV + S +T+ +V E++ L TYL K +
Sbjct: 71 FEHPNVVRLFDVCTVS-----RTDR------ETKLTLVFEHVDQD-LTTYLDKVPEPGVP 118
Query: 171 FKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMT 230
+ + + L RGL +LHS ++VHRD+K +N+L+ + +K+ADFG+AR+ S +T
Sbjct: 119 TETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARI-YSFQMALT 177
Query: 231 GETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIY 266
TL Y APEVL + Y D++S G E++
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 103/216 (47%), Gaps = 28/216 (12%)
Query: 58 IARGTFGTVH--RGLYDG-HDVAVKLL--DWGEEGH--RTEAEIAALRSAFTQEVAVWHK 110
I G +G V R L +G VA+K + GEEG T E+A LR T E
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFE------ 72
Query: 111 LDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLA 170
HPNV + S +T+ +V E++ L TYL K +
Sbjct: 73 --HPNVVRLFDVCTVS-----RTDR------ETKLTLVFEHVDQD-LTTYLDKVPEPGVP 118
Query: 171 FKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMT 230
+ + + L RGL +LHS ++VHRD+K +N+L+ + +K+ADFG+AR+ S +T
Sbjct: 119 TETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARI-YSFQMALT 177
Query: 231 GETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIY 266
TL Y APEVL + Y D++S G E++
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 135/308 (43%), Gaps = 54/308 (17%)
Query: 51 KLVIKSVIARGTFGTVHRGLYDGHDV--AVKLLDWGEEGHRTEAEIAALRSAFTQEVAVW 108
K +K I +G++G V + + A+K+++ + ++ +++ EV +
Sbjct: 27 KYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKT----EVRLM 82
Query: 109 HKLDHPNVTKFI------------------GATMGSSELHIQTENGQVAM---PSNICCV 147
KL HPN+ + G + + I G+ AM + IC
Sbjct: 83 KKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPC 142
Query: 148 --VVEYLPGGALKTYLIKNRRRKLAF----KVVVQLALDLARGLSYLHSQKIVHRDVKTE 201
E G++ + R L F K++ + + L YLH+Q I HRD+K E
Sbjct: 143 PECNEEAINGSIHGF-----RESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPE 197
Query: 202 NMLLDKNRT--VKIADFGVARVEASNPND-----MTGETGTLGYMAPEVLN--GNPYNRK 252
N L N++ +K+ DFG+++ E N+ MT + GT ++APEVLN Y K
Sbjct: 198 NFLFSTNKSFEIKLVDFGLSK-EFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPK 256
Query: 253 CDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSS------LANVMK 306
CD +S G+ L + +P+P ++ ++ S V+ + L E P S L+N++
Sbjct: 257 CDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLN 316
Query: 307 RCWDANPD 314
R D D
Sbjct: 317 RNVDERFD 324
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 112/251 (44%), Gaps = 27/251 (10%)
Query: 98 RSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGAL 157
+ + E+A+ LD+P+V F G +++ E IC
Sbjct: 70 KEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLE---------IC----------RR 110
Query: 158 KTYLIKNRRRKLAFKVVVQLAL-DLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADF 216
++ L ++RRK + + + +G+ YLH+ +++HRD+K N+ L+ + VKI DF
Sbjct: 111 RSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDF 170
Query: 217 GVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLS 276
G+A + GT Y+APEVL ++ + D++S G L+ + P+
Sbjct: 171 GLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSC 230
Query: 277 FSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTSKGGG 336
E T +++N +PR + +++R A+P RP + E+++ D G
Sbjct: 231 LKE-TYIRIKKN-EYSVPRHINPVASALIRRMLHADPTLRPSVAELLT-----DEFFTSG 283
Query: 337 MIPGDQPQGCL 347
P P CL
Sbjct: 284 YAPMRLPTSCL 294
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 115/252 (45%), Gaps = 29/252 (11%)
Query: 98 RSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGAL 157
+ + E+A+ LD+P+V F G +++ E IC
Sbjct: 86 KEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLE---------IC----------RR 126
Query: 158 KTYLIKNRRRKLAFKVVVQLAL-DLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADF 216
++ L ++RRK + + + +G+ YLH+ +++HRD+K N+ L+ + VKI DF
Sbjct: 127 RSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDF 186
Query: 217 GVA-RVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDL 275
G+A ++E T GT Y+APEVL ++ + D++S G L+ + P+
Sbjct: 187 GLATKIEFDGERKKT-LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
Query: 276 SFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTSKGG 335
E T +++N +PR + +++R A+P RP + E+++ D
Sbjct: 246 CLKE-TYIRIKKN-EYSVPRHINPVASALIRRMLHADPTLRPSVAELLT-----DEFFTS 298
Query: 336 GMIPGDQPQGCL 347
G P P CL
Sbjct: 299 GYAPMRLPTSCL 310
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 113/259 (43%), Gaps = 56/259 (21%)
Query: 36 NFLKKQR------QDWEIEPSKLVIKSVIARGTFGTVH-------RGLYDGHDVAVKLLD 82
NFL + + +D ++ + VI RG FG V R +Y A+KLL
Sbjct: 49 NFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVY-----AMKLLS 103
Query: 83 WGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPS 142
E R+++ + F +E + + P V + A L++
Sbjct: 104 KFEMIKRSDS------AFFWEERDIMAFANSPWVVQLFYAFQDDRYLYM----------- 146
Query: 143 NICCVVVEYLPGGAL----KTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDV 198
V+EY+PGG L Y + + + + V LALD +HS +HRDV
Sbjct: 147 -----VMEYMPGGDLVNLMSNYDVPEKWARF-YTAEVVLALDA------IHSMGFIHRDV 194
Query: 199 KTENMLLDKNRTVKIADFGV-ARVEASNPNDMTGETGTLGYMAPEVLNGNP----YNRKC 253
K +NMLLDK+ +K+ADFG ++ GT Y++PEVL Y R+C
Sbjct: 195 KPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGREC 254
Query: 254 DVYSFGICLWEIYCCDMPY 272
D +S G+ L+E+ D P+
Sbjct: 255 DWWSVGVFLYEMLVGDTPF 273
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 113/259 (43%), Gaps = 56/259 (21%)
Query: 36 NFLKKQR------QDWEIEPSKLVIKSVIARGTFGTVH-------RGLYDGHDVAVKLLD 82
NFL + + +D ++ + VI RG FG V R +Y A+KLL
Sbjct: 54 NFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVY-----AMKLLS 108
Query: 83 WGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPS 142
E R+++ + F +E + + P V + A L++
Sbjct: 109 KFEMIKRSDS------AFFWEERDIMAFANSPWVVQLFYAFQDDRYLYM----------- 151
Query: 143 NICCVVVEYLPGGAL----KTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDV 198
V+EY+PGG L Y + + + + V LALD +HS +HRDV
Sbjct: 152 -----VMEYMPGGDLVNLMSNYDVPEKWARF-YTAEVVLALDA------IHSMGFIHRDV 199
Query: 199 KTENMLLDKNRTVKIADFGV-ARVEASNPNDMTGETGTLGYMAPEVLNGNP----YNRKC 253
K +NMLLDK+ +K+ADFG ++ GT Y++PEVL Y R+C
Sbjct: 200 KPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGREC 259
Query: 254 DVYSFGICLWEIYCCDMPY 272
D +S G+ L+E+ D P+
Sbjct: 260 DWWSVGVFLYEMLVGDTPF 278
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 91/187 (48%), Gaps = 9/187 (4%)
Query: 162 IKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVA-R 220
+ RR+ L + G YLH +++HRD+K N+ L+++ VKI DFG+A +
Sbjct: 107 LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATK 166
Query: 221 VEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEV 280
VE T GT Y+APEVL+ ++ + DV+S G ++ + P+ E
Sbjct: 167 VEYDGERKKT-LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE- 224
Query: 281 TSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTSKGGGMIPG 340
T +++N IP+ A+++++ +P RP ++E+++ D G IP
Sbjct: 225 TYLRIKKN-EYSIPKHINPVAASLIQKMLQTDPTARPTINELLN-----DEFFTSGYIPA 278
Query: 341 DQPQGCL 347
P CL
Sbjct: 279 RLPITCL 285
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 112/251 (44%), Gaps = 27/251 (10%)
Query: 98 RSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGAL 157
+ + E+A+ LD+P+V F G +++ E IC
Sbjct: 86 KEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLE---------IC----------RR 126
Query: 158 KTYLIKNRRRKLAFKVVVQLAL-DLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADF 216
++ L ++RRK + + + +G+ YLH+ +++HRD+K N+ L+ + VKI DF
Sbjct: 127 RSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDF 186
Query: 217 GVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLS 276
G+A + GT Y+APEVL ++ + D++S G L+ + P+
Sbjct: 187 GLATKIEFDGERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSC 246
Query: 277 FSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTSKGGG 336
E T +++N +PR + +++R A+P RP + E+++ D G
Sbjct: 247 LKE-TYIRIKKN-EYSVPRHINPVASALIRRMLHADPTLRPSVAELLT-----DEFFTSG 299
Query: 337 MIPGDQPQGCL 347
P P CL
Sbjct: 300 YAPMRLPTSCL 310
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 112/251 (44%), Gaps = 27/251 (10%)
Query: 98 RSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGAL 157
+ + E+A+ LD+P+V F G +++ E IC
Sbjct: 86 KEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLE---------IC----------RR 126
Query: 158 KTYLIKNRRRKLAFKVVVQLAL-DLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADF 216
++ L ++RRK + + + +G+ YLH+ +++HRD+K N+ L+ + VKI DF
Sbjct: 127 RSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDF 186
Query: 217 GVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLS 276
G+A + GT Y+APEVL ++ + D++S G L+ + P+
Sbjct: 187 GLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSC 246
Query: 277 FSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTSKGGG 336
E T +++N +PR + +++R A+P RP + E+++ D G
Sbjct: 247 LKE-TYIRIKKN-EYSVPRHINPVASALIRRMLHADPTLRPSVAELLT-----DEFFTSG 299
Query: 337 MIPGDQPQGCL 347
P P CL
Sbjct: 300 YAPMRLPTSCL 310
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 113/259 (43%), Gaps = 56/259 (21%)
Query: 36 NFLKKQR------QDWEIEPSKLVIKSVIARGTFGTVH-------RGLYDGHDVAVKLLD 82
NFL + + +D ++ + VI RG FG V R +Y A+KLL
Sbjct: 54 NFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVY-----AMKLLS 108
Query: 83 WGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPS 142
E R+++ + F +E + + P V + A L++
Sbjct: 109 KFEMIKRSDS------AFFWEERDIMAFANSPWVVQLFYAFQDDRYLYM----------- 151
Query: 143 NICCVVVEYLPGGAL----KTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDV 198
V+EY+PGG L Y + + + + V LALD +HS +HRDV
Sbjct: 152 -----VMEYMPGGDLVNLMSNYDVPEKWARF-YTAEVVLALDA------IHSMGFIHRDV 199
Query: 199 KTENMLLDKNRTVKIADFGV-ARVEASNPNDMTGETGTLGYMAPEVLNGNP----YNRKC 253
K +NMLLDK+ +K+ADFG ++ GT Y++PEVL Y R+C
Sbjct: 200 KPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGREC 259
Query: 254 DVYSFGICLWEIYCCDMPY 272
D +S G+ L+E+ D P+
Sbjct: 260 DWWSVGVFLYEMLVGDTPF 278
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 91/187 (48%), Gaps = 9/187 (4%)
Query: 162 IKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVA-R 220
+ RR+ L + G YLH +++HRD+K N+ L+++ VKI DFG+A +
Sbjct: 107 LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATK 166
Query: 221 VEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEV 280
VE T GT Y+APEVL+ ++ + DV+S G ++ + P+ E
Sbjct: 167 VEYDGERKKT-LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE- 224
Query: 281 TSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTSKGGGMIPG 340
T +++N IP+ A+++++ +P RP ++E+++ D G IP
Sbjct: 225 TYLRIKKN-EYSIPKHINPVAASLIQKMLQTDPTARPTINELLN-----DEFFTSGYIPA 278
Query: 341 DQPQGCL 347
P CL
Sbjct: 279 RLPITCL 285
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 106/226 (46%), Gaps = 31/226 (13%)
Query: 54 IKSVIARGTFGTVHRGLYD--GHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKL 111
+K + +G F V R ++ G + A K+++ T+ A +E + KL
Sbjct: 33 VKEELGKGAFSVVRRCVHKTTGLEFAAKIIN-------TKKLSARDFQKLEREARICRKL 85
Query: 112 DHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAF 171
HPN+ + + IQ E+ +V + + GG L ++ R +
Sbjct: 86 QHPNIVRLHDS--------IQEESFHY--------LVFDLVTGGELFEDIVA--REFYSE 127
Query: 172 KVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLD---KNRTVKIADFGVARVEASNPND 228
+ ++Y HS IVHR++K EN+LL K VK+ADFG+A +E ++
Sbjct: 128 ADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA-IEVNDSEA 186
Query: 229 MTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPD 274
G GT GY++PEVL +PY++ D+++ G+ L+ + P+ D
Sbjct: 187 WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD 232
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 91/187 (48%), Gaps = 9/187 (4%)
Query: 162 IKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVA-R 220
+ RR+ L + G YLH +++HRD+K N+ L+++ VKI DFG+A +
Sbjct: 111 LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATK 170
Query: 221 VEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEV 280
VE T GT Y+APEVL+ ++ + DV+S G ++ + P+ E
Sbjct: 171 VEYDGERKKT-LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE- 228
Query: 281 TSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTSKGGGMIPG 340
T +++N IP+ A+++++ +P RP ++E+++ D G IP
Sbjct: 229 TYLRIKKN-EYSIPKHINPVAASLIQKMLQTDPTARPTINELLN-----DEFFTSGYIPA 282
Query: 341 DQPQGCL 347
P CL
Sbjct: 283 RLPITCL 289
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 70/129 (54%), Gaps = 5/129 (3%)
Query: 147 VVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLL- 205
+V+E L GG L + +++ + + L +S++H +VHRD+K EN+L
Sbjct: 83 LVMELLNGGELFERI--KKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFT 140
Query: 206 --DKNRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLW 263
+ N +KI DFG AR++ + + TL Y APE+LN N Y+ CD++S G+ L+
Sbjct: 141 DENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILY 200
Query: 264 EIYCCDMPY 272
+ +P+
Sbjct: 201 TMLSGQVPF 209
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 69/129 (53%), Gaps = 4/129 (3%)
Query: 147 VVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLD 206
+V+E L GG L + + + + ++ + + YLHS I HRDVK EN+L
Sbjct: 106 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 165
Query: 207 KNR---TVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLW 263
R +K+ DFG A+ E ++ N +T T Y+APEVL Y++ CD++S G+ ++
Sbjct: 166 SKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMY 224
Query: 264 EIYCCDMPY 272
+ C P+
Sbjct: 225 ILLCGYPPF 233
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 69/129 (53%), Gaps = 4/129 (3%)
Query: 147 VVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLD 206
+V+E L GG L + + + + ++ + + YLHS I HRDVK EN+L
Sbjct: 98 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 157
Query: 207 KNR---TVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLW 263
R +K+ DFG A+ E ++ N +T T Y+APEVL Y++ CD++S G+ ++
Sbjct: 158 SKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMY 216
Query: 264 EIYCCDMPY 272
+ C P+
Sbjct: 217 ILLCGYPPF 225
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 69/129 (53%), Gaps = 4/129 (3%)
Query: 147 VVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLD 206
+V+E L GG L + + + + ++ + + YLHS I HRDVK EN+L
Sbjct: 97 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 156
Query: 207 KNR---TVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLW 263
R +K+ DFG A+ E ++ N +T T Y+APEVL Y++ CD++S G+ ++
Sbjct: 157 SKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMY 215
Query: 264 EIYCCDMPY 272
+ C P+
Sbjct: 216 ILLCGYPPF 224
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 95/175 (54%), Gaps = 7/175 (4%)
Query: 147 VVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLD 206
++++Y+ GG L T+L R R +V + + ++ L +LH I++RD+K EN+LLD
Sbjct: 136 LILDYINGGELFTHL-SQRERFTEHEVQIYVG-EIVLALEHLHKLGIIYRDIKLENILLD 193
Query: 207 KNRTVKIADFGVARVEASNPNDMTGET-GTLGYMAPEVLNG--NPYNRKCDVYSFGICLW 263
N V + DFG+++ ++ + + GT+ YMAP+++ G + +++ D +S G+ ++
Sbjct: 194 SNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMY 253
Query: 264 EIYCCDMPYPDLSFSEVTSAVVRQNLR--PEIPRCCPSSLANVMKRCWDANPDKR 316
E+ P+ + + R+ L+ P P+ + ++++R +P KR
Sbjct: 254 ELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKR 308
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 69/129 (53%), Gaps = 4/129 (3%)
Query: 147 VVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLD 206
+V+E L GG L + + + + ++ + + YLHS I HRDVK EN+L
Sbjct: 96 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 155
Query: 207 KNR---TVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLW 263
R +K+ DFG A+ E ++ N +T T Y+APEVL Y++ CD++S G+ ++
Sbjct: 156 SKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMY 214
Query: 264 EIYCCDMPY 272
+ C P+
Sbjct: 215 ILLCGYPPF 223
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 69/129 (53%), Gaps = 4/129 (3%)
Query: 147 VVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLD 206
+V+E L GG L + + + + ++ + + YLHS I HRDVK EN+L
Sbjct: 142 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 201
Query: 207 KNR---TVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLW 263
R +K+ DFG A+ E ++ N +T T Y+APEVL Y++ CD++S G+ ++
Sbjct: 202 SKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMY 260
Query: 264 EIYCCDMPY 272
+ C P+
Sbjct: 261 ILLCGYPPF 269
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 111/228 (48%), Gaps = 28/228 (12%)
Query: 48 EPSKLVIKSVIARGTFGTVHRGLY--DGHDVAVK--LLDWGEEGHRTEAEIAALRSAFTQ 103
E SK + I +GTFG V + + G VA+K L++ +EG I ALR
Sbjct: 16 EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGF----PITALR----- 66
Query: 104 EVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIK 163
E+ + L H NV I + + + + G + + + C E+ G L L+K
Sbjct: 67 EIKILQLLKHENVVNLIEICRTKASPYNRCK-GSIYLVFDFC----EHDLAGLLSNVLVK 121
Query: 164 NRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR--- 220
++ K V+Q+ L+ GL Y+H KI+HRD+K N+L+ ++ +K+ADFG+AR
Sbjct: 122 FTLSEI--KRVMQMLLN---GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFS 176
Query: 221 -VEASNPNDMTGETGTLGYMAPEVLNGN-PYNRKCDVYSFGICLWEIY 266
+ S PN TL Y PE+L G Y D++ G + E++
Sbjct: 177 LAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMW 224
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 112/251 (44%), Gaps = 27/251 (10%)
Query: 98 RSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGAL 157
R + E+++ L H +V F G +N V + +C
Sbjct: 59 REKMSMEISIHRSLAHQHVVGFHG---------FFEDNDFVFVVLELC----------RR 99
Query: 158 KTYLIKNRRRKLAFKVVVQLAL-DLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADF 216
++ L ++RRK + + L + G YLH +++HRD+K N+ L+++ VKI DF
Sbjct: 100 RSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDF 159
Query: 217 GVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLS 276
G+A + GT Y+APEVL+ ++ + DV+S G ++ + P+
Sbjct: 160 GLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC 219
Query: 277 FSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTSKGGG 336
E T +++N IP+ A+++++ +P RP ++E+++ D G
Sbjct: 220 LKE-TYLRIKKN-EYSIPKHINPVAASLIQKMLQTDPTARPTINELLN-----DEFFTSG 272
Query: 337 MIPGDQPQGCL 347
IP P CL
Sbjct: 273 YIPARLPITCL 283
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 69/129 (53%), Gaps = 4/129 (3%)
Query: 147 VVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLD 206
+V+E L GG L + + + + ++ + + YLHS I HRDVK EN+L
Sbjct: 91 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 150
Query: 207 KNR---TVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLW 263
R +K+ DFG A+ E ++ N +T T Y+APEVL Y++ CD++S G+ ++
Sbjct: 151 SKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMY 209
Query: 264 EIYCCDMPY 272
+ C P+
Sbjct: 210 ILLCGYPPF 218
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 106/226 (46%), Gaps = 31/226 (13%)
Query: 54 IKSVIARGTFGTVHRGLYD--GHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKL 111
+K + +G F V R ++ G + A K+++ T+ A +E + KL
Sbjct: 10 VKEELGKGAFSVVRRCVHKTTGLEFAAKIIN-------TKKLSARDFQKLEREARICRKL 62
Query: 112 DHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAF 171
HPN+ + + IQ E+ +V + + GG L ++ R +
Sbjct: 63 QHPNIVRLHDS--------IQEESFHY--------LVFDLVTGGELFEDIVA--REFYSE 104
Query: 172 KVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLD---KNRTVKIADFGVARVEASNPND 228
+ ++Y HS IVHR++K EN+LL K VK+ADFG+A +E ++
Sbjct: 105 ADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA-IEVNDSEA 163
Query: 229 MTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPD 274
G GT GY++PEVL +PY++ D+++ G+ L+ + P+ D
Sbjct: 164 WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD 209
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 30/213 (14%)
Query: 57 VIARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHP 114
+ G F TV+ R VA+K + + GHR+EA+ R+A +E+ + +L HP
Sbjct: 17 FLGEGQFATVYKARDKNTNQIVAIKKI---KLGHRSEAKDGINRTAL-REIKLLQELSHP 72
Query: 115 NVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVV 174
N+ + A SNI +V +++ +IK+ L +
Sbjct: 73 NIIGLLDA---------------FGHKSNIS-LVFDFMETDL--EVIIKDNSLVLTPSHI 114
Query: 175 VQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETG 234
L +GL YLH I+HRD+K N+LLD+N +K+ADFG+A+ S +
Sbjct: 115 KAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV 174
Query: 235 TLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYC 267
T Y APE+L G +Y G+ +W + C
Sbjct: 175 TRWYRAPELLFG------ARMYGVGVDMWAVGC 201
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 124/280 (44%), Gaps = 35/280 (12%)
Query: 54 IKSVIARGTFGTVHRGLYD--GHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKL 111
+K + +G F V R ++ G + A K+++ T+ A +E + KL
Sbjct: 10 VKEELGKGAFSVVRRCVHKTTGLEFAAKIIN-------TKKLSARDFQKLEREARICRKL 62
Query: 112 DHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAF 171
HPN+ + + IQ E+ +V + + GG L ++ R +
Sbjct: 63 QHPNIVRLHDS--------IQEESFHY--------LVFDLVTGGELFEDIVA--REFYSE 104
Query: 172 KVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLD---KNRTVKIADFGVARVEASNPND 228
+ ++Y HS IVHR++K EN+LL K VK+ADFG+A +E ++
Sbjct: 105 ADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA-IEVNDSEA 163
Query: 229 MTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAV---V 285
G GT GY++PEVL +PY++ D+++ G+ L+ + P+ D + + +
Sbjct: 164 WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGA 223
Query: 286 RQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSM 325
PE P + +++ NP KR D+ + +
Sbjct: 224 YDYPSPEWDTVTPEA-KSLIDSMLTVNPKKRITADQALKV 262
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 69/129 (53%), Gaps = 4/129 (3%)
Query: 147 VVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLD 206
+V+E L GG L + + + + ++ + + YLHS I HRDVK EN+L
Sbjct: 90 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 149
Query: 207 KNR---TVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLW 263
R +K+ DFG A+ E ++ N +T T Y+APEVL Y++ CD++S G+ ++
Sbjct: 150 SKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMY 208
Query: 264 EIYCCDMPY 272
+ C P+
Sbjct: 209 ILLCGYPPF 217
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 111/228 (48%), Gaps = 28/228 (12%)
Query: 48 EPSKLVIKSVIARGTFGTVHRGLY--DGHDVAVK--LLDWGEEGHRTEAEIAALRSAFTQ 103
E SK + I +GTFG V + + G VA+K L++ +EG I ALR
Sbjct: 15 EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGF----PITALR----- 65
Query: 104 EVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIK 163
E+ + L H NV I + + + + G + + + C E+ G L L+K
Sbjct: 66 EIKILQLLKHENVVNLIEICRTKASPYNRCK-GSIYLVFDFC----EHDLAGLLSNVLVK 120
Query: 164 NRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR--- 220
++ K V+Q+ L+ GL Y+H KI+HRD+K N+L+ ++ +K+ADFG+AR
Sbjct: 121 FTLSEI--KRVMQMLLN---GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFS 175
Query: 221 -VEASNPNDMTGETGTLGYMAPEVLNGN-PYNRKCDVYSFGICLWEIY 266
+ S PN TL Y PE+L G Y D++ G + E++
Sbjct: 176 LAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMW 223
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 69/129 (53%), Gaps = 4/129 (3%)
Query: 147 VVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLD 206
+V+E L GG L + + + + ++ + + YLHS I HRDVK EN+L
Sbjct: 92 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 151
Query: 207 KNR---TVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLW 263
R +K+ DFG A+ E ++ N +T T Y+APEVL Y++ CD++S G+ ++
Sbjct: 152 SKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMY 210
Query: 264 EIYCCDMPY 272
+ C P+
Sbjct: 211 ILLCGYPPF 219
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 69/129 (53%), Gaps = 4/129 (3%)
Query: 147 VVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLD 206
+V+E L GG L + + + + ++ + + YLHS I HRDVK EN+L
Sbjct: 136 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 195
Query: 207 KNR---TVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLW 263
R +K+ DFG A+ E ++ N +T T Y+APEVL Y++ CD++S G+ ++
Sbjct: 196 SKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMY 254
Query: 264 EIYCCDMPY 272
+ C P+
Sbjct: 255 ILLCGYPPF 263
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 69/129 (53%), Gaps = 4/129 (3%)
Query: 147 VVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLD 206
+V+E L GG L + + + + ++ + + YLHS I HRDVK EN+L
Sbjct: 92 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 151
Query: 207 KNR---TVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLW 263
R +K+ DFG A+ E ++ N +T T Y+APEVL Y++ CD++S G+ ++
Sbjct: 152 SKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMY 210
Query: 264 EIYCCDMPY 272
+ C P+
Sbjct: 211 ILLCGYPPF 219
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 106/226 (46%), Gaps = 31/226 (13%)
Query: 54 IKSVIARGTFGTVHRGLYD--GHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKL 111
+K + +G F V R ++ G + A K+++ T+ A +E + KL
Sbjct: 9 VKEELGKGAFSVVRRCVHKTTGLEFAAKIIN-------TKKLSARDFQKLEREARICRKL 61
Query: 112 DHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAF 171
HPN+ + + IQ E+ +V + + GG L ++ R +
Sbjct: 62 QHPNIVRLHDS--------IQEESFHY--------LVFDLVTGGELFEDIVA--REFYSE 103
Query: 172 KVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLD---KNRTVKIADFGVARVEASNPND 228
+ ++Y HS IVHR++K EN+LL K VK+ADFG+A +E ++
Sbjct: 104 ADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA-IEVNDSEA 162
Query: 229 MTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPD 274
G GT GY++PEVL +PY++ D+++ G+ L+ + P+ D
Sbjct: 163 WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD 208
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 87/174 (50%), Gaps = 7/174 (4%)
Query: 147 VVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLD 206
+VV+ L GG L+ +L +N K + V +L L YL +Q+I+HRD+K +N+LLD
Sbjct: 92 MVVDLLLGGDLRYHLQQNVHFKE--ETVKLFICELVMALDYLQNQRIIHRDMKPDNILLD 149
Query: 207 KNRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLN---GNPYNRKCDVYSFGICLW 263
++ V I DF +A + +T GT YMAPE+ + G Y+ D +S G+ +
Sbjct: 150 EHGHVHITDFNIAAM-LPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAY 208
Query: 264 EIYCCDMPYPDLSFSEVTSAV-VRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
E+ PY S + V + P + +++K+ + NPD+R
Sbjct: 209 ELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPSAWSQEMVSLLKKLLEPNPDQR 262
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 69/129 (53%), Gaps = 4/129 (3%)
Query: 147 VVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLD 206
+V+E L GG L + + + + ++ + + YLHS I HRDVK EN+L
Sbjct: 90 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 149
Query: 207 KNR---TVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLW 263
R +K+ DFG A+ E ++ N +T T Y+APEVL Y++ CD++S G+ ++
Sbjct: 150 SKRPNAILKLTDFGFAK-ETTSHNSLTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMY 208
Query: 264 EIYCCDMPY 272
+ C P+
Sbjct: 209 ILLCGYPPF 217
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 111/228 (48%), Gaps = 28/228 (12%)
Query: 48 EPSKLVIKSVIARGTFGTVHRGLY--DGHDVAVK--LLDWGEEGHRTEAEIAALRSAFTQ 103
E SK + I +GTFG V + + G VA+K L++ +EG I ALR
Sbjct: 16 EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGF----PITALR----- 66
Query: 104 EVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIK 163
E+ + L H NV I + + + + G + + + C E+ G L L+K
Sbjct: 67 EIKILQLLKHENVVNLIEICRTKASPYNRCK-GSIYLVFDFC----EHDLAGLLSNVLVK 121
Query: 164 NRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR--- 220
++ K V+Q+ L+ GL Y+H KI+HRD+K N+L+ ++ +K+ADFG+AR
Sbjct: 122 FTLSEI--KRVMQMLLN---GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFS 176
Query: 221 -VEASNPNDMTGETGTLGYMAPEVLNGN-PYNRKCDVYSFGICLWEIY 266
+ S PN TL Y PE+L G Y D++ G + E++
Sbjct: 177 LAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMW 224
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 121/271 (44%), Gaps = 45/271 (16%)
Query: 58 IARGTFGTVH--RGLYDGHDVAVKLLDW-GEEGHRTEAEIAALRSAFTQEVAVWHKLDHP 114
I G+FG V+ R + + VA+K + + G++ + +I +EV KL HP
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDI-------IKEVRFLQKLRHP 114
Query: 115 NVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVV 174
N ++ G + + +V+EY G A + L++ ++ L +
Sbjct: 115 NTIQYRGCYLRE----------------HTAWLVMEYCLGSA--SDLLEVHKKPLQEVEI 156
Query: 175 VQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETG 234
+ +GL+YLHS ++HRDVK N+LL + VK+ DFG A + A P + G
Sbjct: 157 AAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA--PANXF--VG 212
Query: 235 TLGYMAPEV---LNGNPYNRKCDVYSFGICLWEIYCCDMP--YPDLSFSEVTSAV--VRQ 287
T +MAPEV ++ Y+ K DV+S GI C ++ P L SA+ + Q
Sbjct: 213 TPYWMAPEVILAMDEGQYDGKVDVWSLGIT-----CIELAERKPPLFNMNAMSALYHIAQ 267
Query: 288 NLRPEIPRCCPSS-LANVMKRCWDANPDKRP 317
N P + S N + C P RP
Sbjct: 268 NESPALQSGHWSEYFRNFVDSCLQKIPQDRP 298
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 88/186 (47%), Gaps = 7/186 (3%)
Query: 162 IKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARV 221
+ RR+ L + G YLH +++HRD+K N+ L+++ VKI DFG+A
Sbjct: 129 LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATK 188
Query: 222 EASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVT 281
+ GT Y+APEVL+ ++ + DV+S G ++ + P+ E T
Sbjct: 189 VEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE-T 247
Query: 282 SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTSKGGGMIPGD 341
+++N IP+ A+++++ +P RP ++E+++ D G IP
Sbjct: 248 YLRIKKN-EYSIPKHINPVAASLIQKMLQTDPTARPTINELLN-----DEFFTSGYIPAR 301
Query: 342 QPQGCL 347
P CL
Sbjct: 302 LPITCL 307
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 88/186 (47%), Gaps = 7/186 (3%)
Query: 162 IKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARV 221
+ RR+ L + G YLH +++HRD+K N+ L+++ VKI DFG+A
Sbjct: 131 LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATK 190
Query: 222 EASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVT 281
+ GT Y+APEVL+ ++ + DV+S G ++ + P+ E T
Sbjct: 191 VEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE-T 249
Query: 282 SAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTSKGGGMIPGD 341
+++N IP+ A+++++ +P RP ++E+++ D G IP
Sbjct: 250 YLRIKKN-EYSIPKHINPVAASLIQKMLQTDPTARPTINELLN-----DEFFTSGYIPAR 303
Query: 342 QPQGCL 347
P CL
Sbjct: 304 LPITCL 309
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 106/233 (45%), Gaps = 31/233 (13%)
Query: 58 IARGTFGTVHRGLYD-GHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPNV 116
I GT+G V++ + G A+K + R E E + S +E+++ +L H N+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKI-------RLEKEDEGIPSTTIREISILKELKHSNI 62
Query: 117 TKFIGATMGSSELHIQTENGQVAMPS--NICCVVVEYLPGGALKTYLIKNRRRKLAFKVV 174
K L + E+ + ++C G L++ K+
Sbjct: 63 VKLYDVIHTKKRLVLVFEHLDQDLKKLLDVC--------EGGLESVTAKS---------- 104
Query: 175 VQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETG 234
L L G++Y H ++++HRD+K +N+L+++ +KIADFG+AR T E
Sbjct: 105 --FLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV 162
Query: 235 TLGYMAPEVLNGN-PYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVR 286
TL Y AP+VL G+ Y+ D++S G E+ +P +S ++ + R
Sbjct: 163 TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFR 215
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 106/233 (45%), Gaps = 31/233 (13%)
Query: 58 IARGTFGTVHRGLYD-GHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPNV 116
I GT+G V++ + G A+K + R E E + S +E+++ +L H N+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKI-------RLEKEDEGIPSTTIREISILKELKHSNI 62
Query: 117 TKFIGATMGSSELHIQTENGQVAMPS--NICCVVVEYLPGGALKTYLIKNRRRKLAFKVV 174
K L + E+ + ++C G L++ K+
Sbjct: 63 VKLYDVIHTKKRLVLVFEHLDQDLKKLLDVC--------EGGLESVTAKS---------- 104
Query: 175 VQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETG 234
L L G++Y H ++++HRD+K +N+L+++ +KIADFG+AR T E
Sbjct: 105 --FLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV 162
Query: 235 TLGYMAPEVLNGN-PYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVR 286
TL Y AP+VL G+ Y+ D++S G E+ +P +S ++ + R
Sbjct: 163 TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFR 215
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 115/261 (44%), Gaps = 30/261 (11%)
Query: 58 IARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPN 115
+ +G FG V+ R + +A+K+L +++ E + +E+ + L HPN
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVL------FKSQLEKEGVEHQLRREIEIQSHLRHPN 76
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVV 175
+ + +++ ++E+ P G L L K+ R +
Sbjct: 77 ILRMYNYFHDRKRIYL----------------MLEFAPRGELYKELQKHGR--FDEQRSA 118
Query: 176 QLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETGT 235
+LA L Y H +K++HRD+K EN+L+ +KIADFG + V A + GT
Sbjct: 119 TFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS-VHAPSLRRRXM-CGT 176
Query: 236 LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPR 295
L Y+ PE++ G ++ K D++ G+ +E P+ S +E +V +L+ P
Sbjct: 177 LDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLK--FPP 234
Query: 296 CCPSSLANVMKRCWDANPDKR 316
+++ + +P +R
Sbjct: 235 FLSDGSKDLISKLLRYHPPQR 255
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 106/233 (45%), Gaps = 31/233 (13%)
Query: 58 IARGTFGTVHRGLYD-GHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPNV 116
I GT+G V++ + G A+K + R E E + S +E+++ +L H N+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKI-------RLEKEDEGIPSTTIREISILKELKHSNI 62
Query: 117 TKFIGATMGSSELHIQTENGQVAMPS--NICCVVVEYLPGGALKTYLIKNRRRKLAFKVV 174
K L + E+ + ++C G L++ K+
Sbjct: 63 VKLYDVIHTKKRLVLVFEHLDQDLKKLLDVC--------EGGLESVTAKS---------- 104
Query: 175 VQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETG 234
L L G++Y H ++++HRD+K +N+L+++ +KIADFG+AR T E
Sbjct: 105 --FLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV 162
Query: 235 TLGYMAPEVLNGN-PYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVR 286
TL Y AP+VL G+ Y+ D++S G E+ +P +S ++ + R
Sbjct: 163 TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFR 215
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 121/271 (44%), Gaps = 45/271 (16%)
Query: 58 IARGTFGTVH--RGLYDGHDVAVKLLDW-GEEGHRTEAEIAALRSAFTQEVAVWHKLDHP 114
I G+FG V+ R + + VA+K + + G++ + +I +EV KL HP
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDI-------IKEVRFLQKLRHP 75
Query: 115 NVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVV 174
N ++ G + + +V+EY G A + L++ ++ L +
Sbjct: 76 NTIQYRGCYLRE----------------HTAWLVMEYCLGSA--SDLLEVHKKPLQEVEI 117
Query: 175 VQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETG 234
+ +GL+YLHS ++HRDVK N+LL + VK+ DFG A + A P + G
Sbjct: 118 AAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA--PANXF--VG 173
Query: 235 TLGYMAPEV---LNGNPYNRKCDVYSFGICLWEIYCCDMP--YPDLSFSEVTSAV--VRQ 287
T +MAPEV ++ Y+ K DV+S GI C ++ P L SA+ + Q
Sbjct: 174 TPYWMAPEVILAMDEGQYDGKVDVWSLGIT-----CIELAERKPPLFNMNAMSALYHIAQ 228
Query: 288 NLRPEIPRCCPSS-LANVMKRCWDANPDKRP 317
N P + S N + C P RP
Sbjct: 229 NESPALQSGHWSEYFRNFVDSCLQKIPQDRP 259
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 88/180 (48%), Gaps = 23/180 (12%)
Query: 145 CCVVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENML 204
+V+EY+PGG + ++L R + + A + YLHS +++RD+K EN+L
Sbjct: 116 LYMVMEYMPGGDMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 205 LDKNRTVKIADFGVARVEASNPNDMTGET----GTLGYMAPEVLNGNPYNRKCDVYSFGI 260
+D+ +K+ADFG A+ + G T GT Y+APE++ YN+ D ++ G+
Sbjct: 174 IDQQGYIKVADFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 261 CLWEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
++E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 227 LIYEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 115/261 (44%), Gaps = 30/261 (11%)
Query: 58 IARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPN 115
+ +G FG V+ R + +A+K+L +++ E + +E+ + L HPN
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVL------FKSQLEKEGVEHQLRREIEIQSHLRHPN 75
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVV 175
+ + +++ ++E+ P G L L K+ R +
Sbjct: 76 ILRMYNYFHDRKRIYL----------------MLEFAPRGELYKELQKHGR--FDEQRSA 117
Query: 176 QLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETGT 235
+LA L Y H +K++HRD+K EN+L+ +KIADFG + V A + GT
Sbjct: 118 TFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS-VHAPSLRRRXM-CGT 175
Query: 236 LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPR 295
L Y+ PE++ G ++ K D++ G+ +E P+ S +E +V +L+ P
Sbjct: 176 LDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLK--FPP 233
Query: 296 CCPSSLANVMKRCWDANPDKR 316
+++ + +P +R
Sbjct: 234 FLSDGSKDLISKLLRYHPPQR 254
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 88/180 (48%), Gaps = 23/180 (12%)
Query: 145 CCVVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENML 204
+V+EY+PGG + ++L R + + A + YLHS +++RD+K EN+L
Sbjct: 116 LYMVMEYMPGGDMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 205 LDKNRTVKIADFGVARVEASNPNDMTGET----GTLGYMAPEVLNGNPYNRKCDVYSFGI 260
+D+ +K+ADFG A+ + G T GT Y+APE++ YN+ D ++ G+
Sbjct: 174 IDQQGYIKVADFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 261 CLWEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
++E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 227 LIYEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 88/180 (48%), Gaps = 23/180 (12%)
Query: 145 CCVVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENML 204
+V+EY+PGG + ++L R + + A + YLHS +++RD+K EN+L
Sbjct: 116 LYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 205 LDKNRTVKIADFGVARVEASNPNDMTGET----GTLGYMAPEVLNGNPYNRKCDVYSFGI 260
+D+ +K+ADFG A+ + G T GT Y+APE++ YN+ D ++ G+
Sbjct: 174 IDQQGYIKVADFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 261 CLWEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
++E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 227 LIYEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 115/261 (44%), Gaps = 30/261 (11%)
Query: 58 IARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPN 115
+ +G FG V+ R + +A+K+L +++ E + +E+ + L HPN
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVL------FKSQLEKEGVEHQLRREIEIQSHLRHPN 75
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVV 175
+ + +++ ++E+ P G L L K+ R +
Sbjct: 76 ILRMYNYFHDRKRIYL----------------MLEFAPRGELYKELQKHGR--FDEQRSA 117
Query: 176 QLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETGT 235
+LA L Y H +K++HRD+K EN+L+ +KIADFG + V A + GT
Sbjct: 118 TFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS-VHAPSLRRRXM-CGT 175
Query: 236 LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPR 295
L Y+ PE++ G ++ K D++ G+ +E P+ S +E +V +L+ P
Sbjct: 176 LDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLK--FPP 233
Query: 296 CCPSSLANVMKRCWDANPDKR 316
+++ + +P +R
Sbjct: 234 FLSDGSKDLISKLLRYHPPQR 254
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 70/129 (54%), Gaps = 5/129 (3%)
Query: 147 VVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLL- 205
+++E + GG L + + + + + ++ D+ + +LHS I HRDVK EN+L
Sbjct: 103 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYT 162
Query: 206 --DKNRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLW 263
+K+ +K+ DFG A+ + N + T Y+APEVL Y++ CD++S G+ ++
Sbjct: 163 SKEKDAVLKLTDFGFAK--ETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMY 220
Query: 264 EIYCCDMPY 272
+ C P+
Sbjct: 221 ILLCGFPPF 229
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 105/232 (45%), Gaps = 29/232 (12%)
Query: 58 IARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPNVT 117
+ GT+ TV++G D V L + E H A A+R EV++ L H N+
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLE-HEEGAPCTAIR-----EVSLLKDLKHANIV 63
Query: 118 KFIGATMGSSELH--IQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVV 175
LH I TE +V EYL LK YL + + V
Sbjct: 64 T----------LHDIIHTEKS--------LTLVFEYLDKD-LKQYL-DDCGNIINMHNVK 103
Query: 176 QLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETGT 235
L RGL+Y H QK++HRD+K +N+L+++ +K+ADFG+AR ++ E T
Sbjct: 104 LFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVT 163
Query: 236 LGYMAPEVLNGNP-YNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVR 286
L Y P++L G+ Y+ + D++ G +E+ +P + E + R
Sbjct: 164 LWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFR 215
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 70/129 (54%), Gaps = 5/129 (3%)
Query: 147 VVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLL- 205
+++E + GG L + + + + + ++ D+ + +LHS I HRDVK EN+L
Sbjct: 84 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYT 143
Query: 206 --DKNRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLW 263
+K+ +K+ DFG A+ + N + T Y+APEVL Y++ CD++S G+ ++
Sbjct: 144 SKEKDAVLKLTDFGFAK--ETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMY 201
Query: 264 EIYCCDMPY 272
+ C P+
Sbjct: 202 ILLCGFPPF 210
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 102/226 (45%), Gaps = 27/226 (11%)
Query: 98 RSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGAL 157
R +EV + ++ HPN+ LH EN +++E + GG L
Sbjct: 59 REEIEREVNILREIRHPNIIT----------LHDIFEN------KTDVVLILELVSGGEL 102
Query: 158 KTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTEN-MLLDKNR---TVKI 213
+L + + L Q + G+ YLHS++I H D+K EN MLLDKN +K+
Sbjct: 103 FDFLAE--KESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKL 160
Query: 214 ADFGVA-RVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPY 272
DFG+A ++EA N+ GT ++APE++N P + D++S G+ + + P+
Sbjct: 161 IDFGIAHKIEAG--NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
Query: 273 PDLSFSEVTSAV--VRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
+ E + + V + E + ++R +P +R
Sbjct: 219 LGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRR 264
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 102/226 (45%), Gaps = 27/226 (11%)
Query: 98 RSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGAL 157
R +EV + ++ HPN+ LH EN +++E + GG L
Sbjct: 52 REEIEREVNILREIRHPNIIT----------LHDIFEN------KTDVVLILELVSGGEL 95
Query: 158 KTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTEN-MLLDKNR---TVKI 213
+L + + L Q + G+ YLHS++I H D+K EN MLLDKN +K+
Sbjct: 96 FDFLAE--KESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKL 153
Query: 214 ADFGVA-RVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPY 272
DFG+A ++EA N+ GT ++APE++N P + D++S G+ + + P+
Sbjct: 154 IDFGIAHKIEAG--NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 211
Query: 273 PDLSFSEVTSAV--VRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
+ E + + V + E + ++R +P +R
Sbjct: 212 LGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRR 257
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 102/226 (45%), Gaps = 27/226 (11%)
Query: 98 RSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGAL 157
R +EV + ++ HPN+ LH EN +++E + GG L
Sbjct: 73 REEIEREVNILREIRHPNIIT----------LHDIFEN------KTDVVLILELVSGGEL 116
Query: 158 KTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTEN-MLLDKNR---TVKI 213
+L + + L Q + G+ YLHS++I H D+K EN MLLDKN +K+
Sbjct: 117 FDFLAE--KESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKL 174
Query: 214 ADFGVA-RVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPY 272
DFG+A ++EA N+ GT ++APE++N P + D++S G+ + + P+
Sbjct: 175 IDFGIAHKIEAG--NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 232
Query: 273 PDLSFSEVTSAV--VRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
+ E + + V + E + ++R +P +R
Sbjct: 233 LGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRR 278
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 87/180 (48%), Gaps = 23/180 (12%)
Query: 145 CCVVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENML 204
+V+EY PGG + ++L R + + A + YLHS +++RD+K EN+L
Sbjct: 117 LYMVLEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 174
Query: 205 LDKNRTVKIADFGVARVEASNPNDMTGET----GTLGYMAPEVLNGNPYNRKCDVYSFGI 260
+D+ +K+ADFG A+ + G T GT Y+APE++ YN+ D ++ G+
Sbjct: 175 IDQQGYIKVADFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 261 CLWEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
++E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 228 LIYEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 129/298 (43%), Gaps = 44/298 (14%)
Query: 58 IARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKL-DHP 114
+ G F V GL+DGH A+K + E+ R EA Q A H+L +HP
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEA----------QREADMHRLFNHP 86
Query: 115 NVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYL--IKNRRRKLAFK 172
N+ + + + E G + +++ + G L + +K++ L
Sbjct: 87 NILRLVAYCL--------RERG----AKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTED 134
Query: 173 VVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFG-----VARVEASNP- 226
++ L L + RGL +H++ HRD+K N+LL + D G VE S
Sbjct: 135 QILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQA 194
Query: 227 ---NDMTGETGTLGYMAPEVLNGNPY---NRKCDVYSFGICLWEIYCCDMPYPDLSFSE- 279
D + T+ Y APE+ + + + + DV+S G L+ + + PY D+ F +
Sbjct: 195 LTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPY-DMVFQKG 253
Query: 280 --VTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTSKGG 335
V AV Q P+ PR S+L ++ +P +RP + ++S LEA+ G
Sbjct: 254 DSVALAVQNQLSIPQSPRHS-SALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPG 310
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 110/228 (48%), Gaps = 28/228 (12%)
Query: 48 EPSKLVIKSVIARGTFGTVHRGLY--DGHDVAVK--LLDWGEEGHRTEAEIAALRSAFTQ 103
E SK + I +GTFG V + + G VA+K L++ +EG I ALR
Sbjct: 16 EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGF----PITALR----- 66
Query: 104 EVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIK 163
E+ + L H NV I + + + + + + + C E+ G L L+K
Sbjct: 67 EIKILQLLKHENVVNLIEICRTKASPYNRCK-ASIYLVFDFC----EHDLAGLLSNVLVK 121
Query: 164 NRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVAR--- 220
++ K V+Q+ L+ GL Y+H KI+HRD+K N+L+ ++ +K+ADFG+AR
Sbjct: 122 FTLSEI--KRVMQMLLN---GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFS 176
Query: 221 -VEASNPNDMTGETGTLGYMAPEVLNGN-PYNRKCDVYSFGICLWEIY 266
+ S PN TL Y PE+L G Y D++ G + E++
Sbjct: 177 LAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMW 224
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 124/292 (42%), Gaps = 33/292 (11%)
Query: 43 QDWEIEPSKLVIKSVIARGTFGTVHRGLY--DGHDVAVKLLDWGEEGHRTEAEIAALRSA 100
Q W+ L I RG +G+V++ ++ G +AVK + R+ + +
Sbjct: 15 QHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRI-------RSTVDEKEQKQL 67
Query: 101 FTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTY 160
V D P + +F GA + I C+ + Y
Sbjct: 68 LMDLDVVMRSSDCPYIVQFYGALFREGDCWI--------------CMELMSTSFDKFYKY 113
Query: 161 LIKNRRRKLAFKVVVQLALDLARGLSYLHSQ-KIVHRDVKTENMLLDKNRTVKIADFGVA 219
+ + +++ ++ L + L++L KI+HRD+K N+LLD++ +K+ DFG++
Sbjct: 114 VYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGIS 173
Query: 220 RVEASNPNDMTGETGTLGYMAPEVLNGNP----YNRKCDVYSFGICLWEIYCCDMPYPDL 275
+ + T + G YMAPE ++ + Y+ + DV+S GI L+E+ PYP
Sbjct: 174 G-QLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKW 232
Query: 276 S--FSEVTSAVVRQ--NLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
+ F ++T V L R S N + C + KRP+ E++
Sbjct: 233 NSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELL 284
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 66/129 (51%), Gaps = 4/129 (3%)
Query: 147 VVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLD 206
+V E L GG L + + + + ++ + + YLHS I HRDVK EN+L
Sbjct: 136 IVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINIAHRDVKPENLLYT 195
Query: 207 KNR---TVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLW 263
R +K+ DFG A+ E ++ N +T T Y+APEVL Y++ CD +S G+ +
Sbjct: 196 SKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDXWSLGVIXY 254
Query: 264 EIYCCDMPY 272
+ C P+
Sbjct: 255 ILLCGYPPF 263
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 4/170 (2%)
Query: 147 VVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLD 206
V+E++ GG L ++ K+RR A A ++ L +LH + I++RD+K +N+LLD
Sbjct: 101 FVMEFVNGGDLMFHIQKSRRFDEARARFY--AAEIISALMFLHDKGIIYRDLKLDNVLLD 158
Query: 207 KNRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIY 266
K+ADFG+ + N GT Y+APE+L Y D ++ G+ L+E+
Sbjct: 159 HEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEML 218
Query: 267 CCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
C P+ + ++ A++ + P ++K NP R
Sbjct: 219 CGHAPFEAENEDDLFEAILNDEVV--YPTWLHEDATGILKSFMTKNPTMR 266
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 121/277 (43%), Gaps = 44/277 (15%)
Query: 58 IARGTFGTVHRGLYDGHD---VAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHP 114
I G FG V R + D VAVK ++ GE+ + +E+ L HP
Sbjct: 27 IGAGNFG-VARLMRDKQANELVAVKYIERGEK----------IDENVKREIINHRSLRHP 75
Query: 115 NVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIK-NRRRKLAFKV 173
N+ +F + + L +V+EY GG L + R + +
Sbjct: 76 NIVRFKEVILTPTHL----------------AIVMEYASGGELFERICNAGRFSEDEARF 119
Query: 174 VVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRT--VKIADFGVARVEASNPNDMTG 231
Q L G+SY H+ ++ HRD+K EN LLD + +KIADFG ++ + +
Sbjct: 120 FFQ---QLISGVSYAHAMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSA 176
Query: 232 ETGTLGYMAPEVLNGNPYNRK-CDVYSFGICLWEIYCCDMPYPD----LSFSEVTSAVVR 286
GT Y+APEVL Y+ K DV+S G+ L+ + P+ D +F + ++
Sbjct: 177 -VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILN 235
Query: 287 -QNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 322
Q P+ P +++ R + A+P KR + E+
Sbjct: 236 VQYAIPDYVHISPEC-RHLISRIFVADPAKRISIPEI 271
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 108/243 (44%), Gaps = 40/243 (16%)
Query: 103 QEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGA----LK 158
+E+ + HPN+ + + + EL +V++ L GG+ +K
Sbjct: 62 KEIQAMSQCHHPNIVSYYTSFVVKDEL----------------WLVMKLLSGGSVLDIIK 105
Query: 159 TYLIKNRRRK--LAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADF 216
+ K + L + + ++ GL YLH +HRDVK N+LL ++ +V+IADF
Sbjct: 106 HIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADF 165
Query: 217 GVARVEASNPNDMTGE------TGTLGYMAPEVLNG-NPYNRKCDVYSFGICLWEIYCCD 269
GV+ A+ D+T GT +MAPEV+ Y+ K D++SFGI E+
Sbjct: 166 GVSAFLATG-GDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGA 224
Query: 270 MPYPDLSFSEVTSAVVRQNLRP---------EIPRCCPSSLANVMKRCWDANPDKRPEMD 320
PY +V + QN P E+ + S ++ C +P+KRP
Sbjct: 225 APYHKYPPMKVL-MLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAA 283
Query: 321 EVV 323
E++
Sbjct: 284 ELL 286
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 108/243 (44%), Gaps = 40/243 (16%)
Query: 103 QEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGA----LK 158
+E+ + HPN+ + + + EL + V++ L GG+ +K
Sbjct: 57 KEIQAMSQCHHPNIVSYYTSFVVKDELWL----------------VMKLLSGGSVLDIIK 100
Query: 159 TYLIKNRRRK--LAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADF 216
+ K + L + + ++ GL YLH +HRDVK N+LL ++ +V+IADF
Sbjct: 101 HIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADF 160
Query: 217 GVARVEASNPNDMTGE------TGTLGYMAPEVLNG-NPYNRKCDVYSFGICLWEIYCCD 269
GV+ A+ D+T GT +MAPEV+ Y+ K D++SFGI E+
Sbjct: 161 GVSAFLATG-GDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGA 219
Query: 270 MPYPDLSFSEVTSAVVRQNLRP---------EIPRCCPSSLANVMKRCWDANPDKRPEMD 320
PY +V + QN P E+ + S ++ C +P+KRP
Sbjct: 220 APYHKYPPMKVL-MLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAA 278
Query: 321 EVV 323
E++
Sbjct: 279 ELL 281
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 107/232 (46%), Gaps = 28/232 (12%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGL--YDGHDVAVKLLDWGEEGHRTEAEIAALRSAFT 102
WE+ P + S + G +G+V GH VAVK L ++ I A R+
Sbjct: 18 WEV-PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKL-----SRPFQSIIHAKRT--Y 69
Query: 103 QEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLI 162
+E+ + + H NV + + L E V + V +L G L +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLE---EFNDVYL--------VTHLMGADLNNIV- 117
Query: 163 KNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVE 222
+ +KL V L + RGL Y+HS I+HRD+K N+ ++++ +KI DFG+AR
Sbjct: 118 --KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-- 173
Query: 223 ASNPNDMTGETGTLGYMAPEV-LNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
++MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 174 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 121/282 (42%), Gaps = 54/282 (19%)
Query: 58 IARGTFGT--VHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPN 115
I G FG + R VAVK ++ G AA+ +E+ L HPN
Sbjct: 28 IGSGNFGVARLMRDKLTKELVAVKYIERG----------AAIDENVQREIINHRSLRHPN 77
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIK-NRRRKLAFKVV 174
+ +F + + L +++EY GG L + R + +
Sbjct: 78 IVRFKEVILTPTHL----------------AIIMEYASGGELYERICNAGRFSEDEARFF 121
Query: 175 VQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRT--VKIADFGVAR--VEASNPNDMT 230
Q L G+SY HS +I HRD+K EN LLD + +KI DFG ++ V S P
Sbjct: 122 FQ---QLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPK--- 175
Query: 231 GETGTLGYMAPEVLNGNPYNRK-CDVYSFGICLWEIYCCDMPYPD----LSFSEVTSAV- 284
GT Y+APEVL Y+ K DV+S G+ L+ + P+ D + + +
Sbjct: 176 STVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRIL 235
Query: 285 -VRQNLRPEI---PRCCPSSLANVMKRCWDANPDKRPEMDEV 322
V+ ++ +I P CC +++ R + A+P R + E+
Sbjct: 236 SVKYSIPDDIRISPECC-----HLISRIFVADPATRISIPEI 272
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 107/232 (46%), Gaps = 28/232 (12%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGL--YDGHDVAVKLLDWGEEGHRTEAEIAALRSAFT 102
WE+ P + S + G +G+V GH VAVK L ++ I A R+
Sbjct: 37 WEV-PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKL-----SRPFQSIIHAKRT--Y 88
Query: 103 QEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLI 162
+E+ + + H NV + + L E V + V +L G L +
Sbjct: 89 RELRLLKHMKHENVIGLLDVFTPARSLE---EFNDVYL--------VTHLMGADLNNIV- 136
Query: 163 KNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVE 222
+ +KL V L + RGL Y+HS I+HRD+K N+ ++++ +KI DFG+AR
Sbjct: 137 --KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-- 192
Query: 223 ASNPNDMTGETGTLGYMAPEV-LNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
++MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 193 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 243
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 107/232 (46%), Gaps = 28/232 (12%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGL--YDGHDVAVKLLDWGEEGHRTEAEIAALRSAFT 102
WE+ P + S + G +G+V GH VAVK L ++ I A R+
Sbjct: 38 WEV-PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKL-----SRPFQSIIHAKRT--Y 89
Query: 103 QEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLI 162
+E+ + + H NV + + L E V + V +L G L +
Sbjct: 90 RELRLLKHMKHENVIGLLDVFTPARSLE---EFNDVYL--------VTHLMGADLNNIV- 137
Query: 163 KNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVE 222
+ +KL V L + RGL Y+HS I+HRD+K N+ ++++ +KI DFG+AR
Sbjct: 138 --KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-- 193
Query: 223 ASNPNDMTGETGTLGYMAPEV-LNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
++MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 194 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 244
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 107/232 (46%), Gaps = 28/232 (12%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGL--YDGHDVAVKLLDWGEEGHRTEAEIAALRSAFT 102
WE+ P + S + G +G+V GH VAVK L ++ I A R+
Sbjct: 24 WEV-PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKL-----SRPFQSIIHAKRT--Y 75
Query: 103 QEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLI 162
+E+ + + H NV + + L E V + V +L G L +
Sbjct: 76 RELRLLKHMKHENVIGLLDVFTPARSL---EEFNDVYL--------VTHLMGADLNNIV- 123
Query: 163 KNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVE 222
+ +KL V L + RGL Y+HS I+HRD+K N+ ++++ +KI DFG+AR
Sbjct: 124 --KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-- 179
Query: 223 ASNPNDMTGETGTLGYMAPEV-LNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
++MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 180 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 230
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 87/180 (48%), Gaps = 23/180 (12%)
Query: 145 CCVVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENML 204
+V+EY+PGG + ++L R + + A + YLHS +++RD+K EN+L
Sbjct: 137 LYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 194
Query: 205 LDKNRTVKIADFGVARVEASNPNDMTGET----GTLGYMAPEVLNGNPYNRKCDVYSFGI 260
+D+ +++ DFG A+ + G T GT Y+APE++ YN+ D ++ G+
Sbjct: 195 IDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 247
Query: 261 CLWEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
++E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 248 LIYEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 301
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 107/232 (46%), Gaps = 28/232 (12%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGL--YDGHDVAVKLLDWGEEGHRTEAEIAALRSAFT 102
WE+ P + S + G +G+V GH VAVK L ++ I A R+
Sbjct: 14 WEV-PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKL-----SRPFQSIIHAKRT--Y 65
Query: 103 QEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLI 162
+E+ + + H NV + + L E V + V +L G L +
Sbjct: 66 RELRLLKHMKHENVIGLLDVFTPARSLE---EFNDVYL--------VTHLMGADLNNIV- 113
Query: 163 KNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVE 222
+ +KL V L + RGL Y+HS I+HRD+K N+ ++++ +KI DFG+AR
Sbjct: 114 --KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-- 169
Query: 223 ASNPNDMTGETGTLGYMAPEV-LNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
++MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 170 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 220
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 87/180 (48%), Gaps = 23/180 (12%)
Query: 145 CCVVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENML 204
+V+EY+PGG + ++L R + + A + YLHS +++RD+K EN+L
Sbjct: 116 LYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 205 LDKNRTVKIADFGVARVEASNPNDMTGET----GTLGYMAPEVLNGNPYNRKCDVYSFGI 260
+D+ +++ DFG A+ + G T GT Y+APE++ YN+ D ++ G+
Sbjct: 174 IDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 261 CLWEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
++E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 227 LIYEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 87/180 (48%), Gaps = 23/180 (12%)
Query: 145 CCVVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENML 204
+V+EY+PGG + ++L R + + A + YLHS +++RD+K EN+L
Sbjct: 117 LYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 174
Query: 205 LDKNRTVKIADFGVARVEASNPNDMTGET----GTLGYMAPEVLNGNPYNRKCDVYSFGI 260
+D+ +++ DFG A+ + G T GT Y+APE++ YN+ D ++ G+
Sbjct: 175 IDQQGYIQVTDFGFAK-------RVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 261 CLWEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
++E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 228 LIYEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 87/180 (48%), Gaps = 23/180 (12%)
Query: 145 CCVVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENML 204
+V+EY+PGG + ++L R + + A + YLHS +++RD+K EN+L
Sbjct: 116 LYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 205 LDKNRTVKIADFGVARVEASNPNDMTGET----GTLGYMAPEVLNGNPYNRKCDVYSFGI 260
+D+ +++ DFG A+ + G T GT Y+APE++ YN+ D ++ G+
Sbjct: 174 IDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 261 CLWEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
++E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 227 LIYEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 87/180 (48%), Gaps = 23/180 (12%)
Query: 145 CCVVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENML 204
+V+EY+PGG + ++L R + + A + YLHS +++RD+K EN+L
Sbjct: 117 LYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 174
Query: 205 LDKNRTVKIADFGVARVEASNPNDMTGET----GTLGYMAPEVLNGNPYNRKCDVYSFGI 260
+D+ +++ DFG A+ + G T GT Y+APE++ YN+ D ++ G+
Sbjct: 175 IDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 261 CLWEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
++E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 228 LIYEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 87/180 (48%), Gaps = 23/180 (12%)
Query: 145 CCVVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENML 204
+V+EY PGG + ++L R + + A + YLHS +++RD+K EN++
Sbjct: 116 LYMVMEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLM 173
Query: 205 LDKNRTVKIADFGVARVEASNPNDMTGET----GTLGYMAPEVLNGNPYNRKCDVYSFGI 260
+D+ +K+ DFG+A+ + G T GT Y+APE++ YN+ D ++ G+
Sbjct: 174 IDQQGYIKVTDFGLAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 261 CLWEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
++E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 227 LIYEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 87/180 (48%), Gaps = 23/180 (12%)
Query: 145 CCVVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENML 204
+V+EY+PGG + ++L R + + A + YLHS +++RD+K EN+L
Sbjct: 116 LYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 205 LDKNRTVKIADFGVARVEASNPNDMTGET----GTLGYMAPEVLNGNPYNRKCDVYSFGI 260
+D+ +++ DFG A+ + G T GT Y+APE++ YN+ D ++ G+
Sbjct: 174 IDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 261 CLWEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
++E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 227 LIYEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 87/180 (48%), Gaps = 23/180 (12%)
Query: 145 CCVVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENML 204
+V+EY+PGG + ++L R + + A + YLHS +++RD+K EN+L
Sbjct: 116 LYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 205 LDKNRTVKIADFGVARVEASNPNDMTGET----GTLGYMAPEVLNGNPYNRKCDVYSFGI 260
+D+ +++ DFG A+ + G T GT Y+APE++ YN+ D ++ G+
Sbjct: 174 IDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 261 CLWEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
++E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 227 LIYEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 87/180 (48%), Gaps = 23/180 (12%)
Query: 145 CCVVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENML 204
+V+EY+PGG + ++L R + + A + YLHS +++RD+K EN+L
Sbjct: 116 LYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 205 LDKNRTVKIADFGVARVEASNPNDMTGET----GTLGYMAPEVLNGNPYNRKCDVYSFGI 260
+D+ +++ DFG A+ + G T GT Y+APE++ YN+ D ++ G+
Sbjct: 174 IDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 261 CLWEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
++E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 227 LIYEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 87/180 (48%), Gaps = 23/180 (12%)
Query: 145 CCVVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENML 204
+V+EY+PGG + ++L R + + A + YLHS +++RD+K EN+L
Sbjct: 117 LYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 174
Query: 205 LDKNRTVKIADFGVARVEASNPNDMTGET----GTLGYMAPEVLNGNPYNRKCDVYSFGI 260
+D+ +++ DFG A+ + G T GT Y+APE++ YN+ D ++ G+
Sbjct: 175 IDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 261 CLWEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
++E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 228 LIYEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 87/180 (48%), Gaps = 23/180 (12%)
Query: 145 CCVVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENML 204
+V+EY+PGG + ++L R + + A + YLHS +++RD+K EN+L
Sbjct: 116 LYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 205 LDKNRTVKIADFGVARVEASNPNDMTGET----GTLGYMAPEVLNGNPYNRKCDVYSFGI 260
+D+ +++ DFG A+ + G T GT Y+APE++ YN+ D ++ G+
Sbjct: 174 IDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 261 CLWEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
++E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 227 LIYEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 87/180 (48%), Gaps = 23/180 (12%)
Query: 145 CCVVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENML 204
+V+EY+PGG + ++L R + + A + YLHS +++RD+K EN+L
Sbjct: 117 LYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 174
Query: 205 LDKNRTVKIADFGVARVEASNPNDMTGET----GTLGYMAPEVLNGNPYNRKCDVYSFGI 260
+D+ +++ DFG A+ + G T GT Y+APE++ YN+ D ++ G+
Sbjct: 175 IDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 261 CLWEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
++E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 228 LIYEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 103/225 (45%), Gaps = 25/225 (11%)
Query: 98 RSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGAL 157
R +EV++ ++ HPNV LH EN +++E + GG L
Sbjct: 58 REDIEREVSILKEIQHPNVIT----------LHEVYEN------KTDVILILELVAGGEL 101
Query: 158 KTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTEN-MLLDKNR---TVKI 213
+L + + L + + + G+ YLHS +I H D+K EN MLLD+N +KI
Sbjct: 102 FDFLAE--KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 214 ADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
DFG+A + N+ GT ++APE++N P + D++S G+ + + P+
Sbjct: 160 IDFGLAH-KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
Query: 274 DLSFSEVTSAVVRQNLRPEIPRCC-PSSLA-NVMKRCWDANPDKR 316
+ E + V N E S+LA + ++R +P KR
Sbjct: 219 GDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR 263
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 87/180 (48%), Gaps = 23/180 (12%)
Query: 145 CCVVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENML 204
+V+EY+PGG + ++L R + + A + YLHS +++RD+K EN+L
Sbjct: 117 LYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 174
Query: 205 LDKNRTVKIADFGVARVEASNPNDMTGET----GTLGYMAPEVLNGNPYNRKCDVYSFGI 260
+D+ +++ DFG A+ + G T GT Y+APE++ YN+ D ++ G+
Sbjct: 175 IDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 261 CLWEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
++E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 228 LIYEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 69/127 (54%), Gaps = 7/127 (5%)
Query: 148 VVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDK 207
+V +L G L + + +KL V L + RGL Y+HS I+HRD+K N+ +++
Sbjct: 104 LVTHLMGADLNNIV---KXQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
Query: 208 NRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEV-LNGNPYNRKCDVYSFGICLWEIY 266
+ +KI DFG+AR ++MTG T Y APE+ LN YN+ D++S G + E+
Sbjct: 161 DXELKILDFGLAR---HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 267 CCDMPYP 273
+P
Sbjct: 218 TGRTLFP 224
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 112/273 (41%), Gaps = 38/273 (13%)
Query: 30 PIGKASNFLKKQRQDWEIEPSKLVIKSVIARGTFGTVHRGLYDGHD--VAVKLLDWGEEG 87
P ++ R+D+EI VI RG FG V D A+K+L+ E
Sbjct: 61 PFTSKVKQMRLHREDFEI-------LKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEML 113
Query: 88 HRTEAEIAALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCV 147
R E + F +E V D +T A + L++
Sbjct: 114 KRAET------ACFREERDVLVNGDSKWITTLHYAFQDDNNLYL---------------- 151
Query: 148 VVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDK 207
V++Y GG L T L K R LA ++ + +H VHRD+K +N+L+D
Sbjct: 152 VMDYYVGGDLLTLLSKFEDRLPEEMARFYLA-EMVIAIDSVHQLHYVHRDIKPDNILMDM 210
Query: 208 NRTVKIADFG-VARVEASNPNDMTGETGTLGYMAPEVLNG-----NPYNRKCDVYSFGIC 261
N +++ADFG ++ + GT Y++PE+L Y +CD +S G+C
Sbjct: 211 NGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVC 270
Query: 262 LWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIP 294
++E+ + P+ S E ++ R + P
Sbjct: 271 MYEMLYGETPFYAESLVETYGKIMNHKERFQFP 303
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 87/180 (48%), Gaps = 23/180 (12%)
Query: 145 CCVVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENML 204
+V+EY+PGG + ++L R + + A + YLHS +++RD+K EN+L
Sbjct: 109 LYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 166
Query: 205 LDKNRTVKIADFGVARVEASNPNDMTGET----GTLGYMAPEVLNGNPYNRKCDVYSFGI 260
+D+ +++ DFG A+ + G T GT Y+APE++ YN+ D ++ G+
Sbjct: 167 IDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 219
Query: 261 CLWEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
++E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 220 LIYEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 273
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 103/225 (45%), Gaps = 25/225 (11%)
Query: 98 RSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGAL 157
R +EV++ ++ HPNV LH EN +++E + GG L
Sbjct: 58 REDIEREVSILKEIQHPNVIT----------LHEVYEN------KTDVILILELVAGGEL 101
Query: 158 KTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTEN-MLLDKNR---TVKI 213
+L + + L + + + G+ YLHS +I H D+K EN MLLD+N +KI
Sbjct: 102 FDFLAE--KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 214 ADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
DFG+A + N+ GT ++APE++N P + D++S G+ + + P+
Sbjct: 160 IDFGLAH-KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
Query: 274 DLSFSEVTSAVVRQNLRPEIPRCC-PSSLA-NVMKRCWDANPDKR 316
+ E + V N E S+LA + ++R +P KR
Sbjct: 219 GDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR 263
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 87/180 (48%), Gaps = 23/180 (12%)
Query: 145 CCVVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENML 204
+V+EY+PGG + ++L R + + A + YLHS +++RD+K EN+L
Sbjct: 102 LYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 159
Query: 205 LDKNRTVKIADFGVARVEASNPNDMTGETGTL----GYMAPEVLNGNPYNRKCDVYSFGI 260
+D+ +++ DFG A+ + G T TL Y+APE++ YN+ D ++ G+
Sbjct: 160 IDQQGYIQVTDFGFAK-------RVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGV 212
Query: 261 CLWEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
++E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 213 LIYEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 266
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 103/225 (45%), Gaps = 25/225 (11%)
Query: 98 RSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGAL 157
R +EV++ ++ HPNV LH EN +++E + GG L
Sbjct: 58 REDIEREVSILKEIQHPNVIT----------LHEVYEN------KTDVILILELVAGGEL 101
Query: 158 KTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTEN-MLLDKNR---TVKI 213
+L + + L + + + G+ YLHS +I H D+K EN MLLD+N +KI
Sbjct: 102 FDFLAE--KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 214 ADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
DFG+A + N+ GT ++APE++N P + D++S G+ + + P+
Sbjct: 160 IDFGLAH-KIDFGNEFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
Query: 274 DLSFSEVTSAVVRQNLRPEIPRCC-PSSLA-NVMKRCWDANPDKR 316
+ E + V N E S+LA + ++R +P KR
Sbjct: 219 GDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR 263
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 103/225 (45%), Gaps = 25/225 (11%)
Query: 98 RSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGAL 157
R +EV++ ++ HPNV LH EN +++E + GG L
Sbjct: 58 REDIEREVSILKEIQHPNVIT----------LHEVYEN------KTDVILILELVAGGEL 101
Query: 158 KTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTEN-MLLDKNR---TVKI 213
+L + + L + + + G+ YLHS +I H D+K EN MLLD+N +KI
Sbjct: 102 FDFLAE--KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 214 ADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
DFG+A + N+ GT ++APE++N P + D++S G+ + + P+
Sbjct: 160 IDFGLAH-KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
Query: 274 DLSFSEVTSAVVRQNLRPEIPRCC-PSSLA-NVMKRCWDANPDKR 316
+ E + V N E S+LA + ++R +P KR
Sbjct: 219 GDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR 263
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 107/232 (46%), Gaps = 28/232 (12%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGL--YDGHDVAVKLLDWGEEGHRTEAEIAALRSAFT 102
WE+ P + + + G +G+V GH VAVK L ++ I A R+
Sbjct: 28 WEV-PERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKL-----SRPFQSIIHAKRT--Y 79
Query: 103 QEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLI 162
+E+ + + H NV + + L E V + V +L G L +
Sbjct: 80 RELRLLKHMKHENVIGLLDVFTPARSLE---EFNDVYL--------VTHLMGADLNNIV- 127
Query: 163 KNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVE 222
+ +KL V L + RGL Y+HS I+HRD+K N+ ++++ +KI DFG+AR
Sbjct: 128 --KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-- 183
Query: 223 ASNPNDMTGETGTLGYMAPEV-LNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
++MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 184 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 234
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 86/180 (47%), Gaps = 23/180 (12%)
Query: 145 CCVVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENML 204
+V+EY PGG + ++L R + + A + YLHS +++RD+K EN++
Sbjct: 116 LYMVMEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLM 173
Query: 205 LDKNRTVKIADFGVARVEASNPNDMTGET----GTLGYMAPEVLNGNPYNRKCDVYSFGI 260
+D+ +K+ DFG A+ + G T GT Y+APE++ YN+ D ++ G+
Sbjct: 174 IDQQGYIKVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 261 CLWEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
++E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 227 LIYEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 86/180 (47%), Gaps = 23/180 (12%)
Query: 145 CCVVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENML 204
+V+EY PGG + ++L R + + A + YLHS +++RD+K EN++
Sbjct: 117 LYMVMEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLM 174
Query: 205 LDKNRTVKIADFGVARVEASNPNDMTGET----GTLGYMAPEVLNGNPYNRKCDVYSFGI 260
+D+ +K+ DFG A+ + G T GT Y+APE++ YN+ D ++ G+
Sbjct: 175 IDQQGYIKVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 261 CLWEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
++E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 228 LIYEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 103/225 (45%), Gaps = 25/225 (11%)
Query: 98 RSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGAL 157
R +EV++ ++ HPNV LH EN +++E + GG L
Sbjct: 57 REDIEREVSILKEIQHPNVIT----------LHEVYEN------KTDVILILELVAGGEL 100
Query: 158 KTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTEN-MLLDKNR---TVKI 213
+L + + L + + + G+ YLHS +I H D+K EN MLLD+N +KI
Sbjct: 101 FDFLAE--KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKI 158
Query: 214 ADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
DFG+A + N+ GT ++APE++N P + D++S G+ + + P+
Sbjct: 159 IDFGLAH-KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 217
Query: 274 DLSFSEVTSAVVRQNLRPEIPRCC-PSSLA-NVMKRCWDANPDKR 316
+ E + V N E S+LA + ++R +P KR
Sbjct: 218 GDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR 262
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 86/180 (47%), Gaps = 23/180 (12%)
Query: 145 CCVVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENML 204
+V+EY PGG + ++L R + + A + YLHS +++RD+K EN++
Sbjct: 117 LYMVMEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLM 174
Query: 205 LDKNRTVKIADFGVARVEASNPNDMTGET----GTLGYMAPEVLNGNPYNRKCDVYSFGI 260
+D+ +K+ DFG A+ + G T GT Y+APE++ YN+ D ++ G+
Sbjct: 175 IDQQGYIKVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 261 CLWEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
++E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 228 LIYEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 103/225 (45%), Gaps = 25/225 (11%)
Query: 98 RSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGAL 157
R +EV++ ++ HPNV LH EN +++E + GG L
Sbjct: 58 REDIEREVSILKEIQHPNVIT----------LHEVYEN------KTDVILILELVAGGEL 101
Query: 158 KTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTEN-MLLDKNR---TVKI 213
+L + + L + + + G+ YLHS +I H D+K EN MLLD+N +KI
Sbjct: 102 FDFLAE--KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 214 ADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
DFG+A + N+ GT ++APE++N P + D++S G+ + + P+
Sbjct: 160 IDFGLAH-KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
Query: 274 DLSFSEVTSAVVRQNLRPEIPRCC-PSSLA-NVMKRCWDANPDKR 316
+ E + V N E S+LA + ++R +P KR
Sbjct: 219 GDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR 263
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 86/180 (47%), Gaps = 23/180 (12%)
Query: 145 CCVVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENML 204
+V+EY PGG + ++L R + + A + YLHS +++RD+K EN++
Sbjct: 117 LYMVMEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLM 174
Query: 205 LDKNRTVKIADFGVARVEASNPNDMTGET----GTLGYMAPEVLNGNPYNRKCDVYSFGI 260
+D+ +K+ DFG A+ + G T GT Y+APE++ YN+ D ++ G+
Sbjct: 175 IDQQGYIKVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 261 CLWEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
++E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 228 LIYEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 103/225 (45%), Gaps = 25/225 (11%)
Query: 98 RSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGAL 157
R +EV++ ++ HPNV LH EN +++E + GG L
Sbjct: 58 REDIEREVSILKEIQHPNVIT----------LHEVYEN------KTDVILILELVAGGEL 101
Query: 158 KTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTEN-MLLDKNR---TVKI 213
+L + + L + + + G+ YLHS +I H D+K EN MLLD+N +KI
Sbjct: 102 FDFLAE--KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 214 ADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
DFG+A + N+ GT ++APE++N P + D++S G+ + + P+
Sbjct: 160 IDFGLAH-KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
Query: 274 DLSFSEVTSAVVRQNLRPEIPRCC-PSSLA-NVMKRCWDANPDKR 316
+ E + V N E S+LA + ++R +P KR
Sbjct: 219 GDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR 263
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 103/225 (45%), Gaps = 25/225 (11%)
Query: 98 RSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGAL 157
R +EV++ ++ HPNV LH EN +++E + GG L
Sbjct: 57 REDIEREVSILKEIQHPNVIT----------LHEVYEN------KTDVILILELVAGGEL 100
Query: 158 KTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTEN-MLLDKNR---TVKI 213
+L + + L + + + G+ YLHS +I H D+K EN MLLD+N +KI
Sbjct: 101 FDFLAE--KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKI 158
Query: 214 ADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
DFG+A + N+ GT ++APE++N P + D++S G+ + + P+
Sbjct: 159 IDFGLAH-KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 217
Query: 274 DLSFSEVTSAVVRQNLRPEIPRCC-PSSLA-NVMKRCWDANPDKR 316
+ E + V N E S+LA + ++R +P KR
Sbjct: 218 GDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR 262
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 103/225 (45%), Gaps = 25/225 (11%)
Query: 98 RSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGAL 157
R +EV++ ++ HPNV LH EN +++E + GG L
Sbjct: 58 REDIEREVSILKEIQHPNVIT----------LHEVYEN------KTDVILILELVAGGEL 101
Query: 158 KTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTEN-MLLDKNR---TVKI 213
+L + + L + + + G+ YLHS +I H D+K EN MLLD+N +KI
Sbjct: 102 FDFLAE--KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 214 ADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
DFG+A + N+ GT ++APE++N P + D++S G+ + + P+
Sbjct: 160 IDFGLAH-KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
Query: 274 DLSFSEVTSAVVRQNLRPEIPRCC-PSSLA-NVMKRCWDANPDKR 316
+ E + V N E S+LA + ++R +P KR
Sbjct: 219 GDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR 263
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 103/225 (45%), Gaps = 25/225 (11%)
Query: 98 RSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGAL 157
R +EV++ ++ HPNV LH EN +++E + GG L
Sbjct: 58 REDIEREVSILKEIQHPNVIT----------LHEVYEN------KTDVILILELVAGGEL 101
Query: 158 KTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTEN-MLLDKNR---TVKI 213
+L + + L + + + G+ YLHS +I H D+K EN MLLD+N +KI
Sbjct: 102 FDFLAE--KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 214 ADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
DFG+A + N+ GT ++APE++N P + D++S G+ + + P+
Sbjct: 160 IDFGLAH-KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
Query: 274 DLSFSEVTSAVVRQNLRPEIPRCC-PSSLA-NVMKRCWDANPDKR 316
+ E + V N E S+LA + ++R +P KR
Sbjct: 219 GDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR 263
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 86/180 (47%), Gaps = 23/180 (12%)
Query: 145 CCVVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENML 204
+V+EY+PGG + ++L R + A + YLHS +++RD+K EN+L
Sbjct: 116 LYMVMEYVPGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 205 LDKNRTVKIADFGVARVEASNPNDMTGET----GTLGYMAPEVLNGNPYNRKCDVYSFGI 260
+D+ +++ DFG A+ + G T GT Y+APE++ YN+ D ++ G+
Sbjct: 174 IDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 261 CLWEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
++E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 227 LIYEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 103/225 (45%), Gaps = 25/225 (11%)
Query: 98 RSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGAL 157
R +EV++ ++ HPNV LH EN +++E + GG L
Sbjct: 58 REDIEREVSILKEIQHPNVIT----------LHEVYEN------KTDVILILELVAGGEL 101
Query: 158 KTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTEN-MLLDKNR---TVKI 213
+L + + L + + + G+ YLHS +I H D+K EN MLLD+N +KI
Sbjct: 102 FDFLAE--KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 214 ADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
DFG+A + N+ GT ++APE++N P + D++S G+ + + P+
Sbjct: 160 IDFGLAH-KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
Query: 274 DLSFSEVTSAVVRQNLRPEIPRCC-PSSLA-NVMKRCWDANPDKR 316
+ E + V N E S+LA + ++R +P KR
Sbjct: 219 GDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR 263
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 103/225 (45%), Gaps = 25/225 (11%)
Query: 98 RSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGAL 157
R +EV++ ++ HPNV LH EN +++E + GG L
Sbjct: 58 REDIEREVSILKEIQHPNVIT----------LHEVYEN------KTDVILILELVAGGEL 101
Query: 158 KTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTEN-MLLDKNR---TVKI 213
+L + + L + + + G+ YLHS +I H D+K EN MLLD+N +KI
Sbjct: 102 FDFLAE--KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 214 ADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
DFG+A + N+ GT ++APE++N P + D++S G+ + + P+
Sbjct: 160 IDFGLAH-KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
Query: 274 DLSFSEVTSAVVRQNLRPEIPRCC-PSSLA-NVMKRCWDANPDKR 316
+ E + V N E S+LA + ++R +P KR
Sbjct: 219 GDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR 263
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 90/186 (48%), Gaps = 35/186 (18%)
Query: 145 CCVVVEYLPGGALKTYLIKNRR------RKLAFKVVVQLALDLARGLSYLHSQKIVHRDV 198
+V+EY+PGG + ++L + R R A ++V+ YLHS +++RD+
Sbjct: 116 LYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTF--------EYLHSLDLIYRDL 167
Query: 199 KTENMLLDKNRTVKIADFGVARVEASNPNDMTGET----GTLGYMAPEVLNGNPYNRKCD 254
K EN+L+D+ +++ DFG A+ + G T GT Y+APE++ YN+ D
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVD 220
Query: 255 VYSFGICLWEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWD 310
++ G+ ++E+ P+ P + ++ S VR P S L ++++
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQ 274
Query: 311 ANPDKR 316
+ KR
Sbjct: 275 VDLTKR 280
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 123/279 (44%), Gaps = 48/279 (17%)
Query: 58 IARGTFGTVHRGLYDGHD---VAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHP 114
I G FG V R + D VAVK ++ GE+ IAA +E+ L HP
Sbjct: 27 IGSGNFG-VARLMRDKQSNELVAVKYIERGEK-------IAA---NVKREIINHRSLRHP 75
Query: 115 NVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIK-NRRRKLAFKV 173
N+ +F + + L +V+EY GG L + R + +
Sbjct: 76 NIVRFKEVILTPTHL----------------AIVMEYASGGELFERICNAGRFSEDEARF 119
Query: 174 VVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRT--VKIADFGVAR--VEASNPNDM 229
Q L G+SY H+ ++ HRD+K EN LLD + +KI DFG ++ V S P
Sbjct: 120 FFQ---QLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPK-- 174
Query: 230 TGETGTLGYMAPEVLNGNPYNRK-CDVYSFGICLWEIYCCDMPYPD----LSFSEVTSAV 284
GT Y+APEVL Y+ K DV+S G+ L+ + P+ D +F + +
Sbjct: 175 -STVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRI 233
Query: 285 VR-QNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 322
+ Q P+ P +++ R + A+P KR + E+
Sbjct: 234 LNVQYAIPDYVHISPEC-RHLISRIFVADPAKRISIPEI 271
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 120/272 (44%), Gaps = 36/272 (13%)
Query: 46 EIEPSKLVIKSVIARGTFGTVHR-----GLYDGHDVAVKLLDWGEEGHRTEAEIA--ALR 98
+I P + V+ +G +G V + G G A+K+L +A I A
Sbjct: 13 KIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLK--------KAMIVRNAKD 64
Query: 99 SAFTQ-EVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGAL 157
+A T+ E + ++ HP + I A +L++ ++EYL GG L
Sbjct: 65 TAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYL----------------ILEYLSGGEL 108
Query: 158 KTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFG 217
++ R +++ L +LH + I++RD+K EN++L+ VK+ DFG
Sbjct: 109 --FMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFG 166
Query: 218 VARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSF 277
+ + + GT+ YMAPE+L + +NR D +S G ++++ P+ +
Sbjct: 167 LCKESIHDGTVTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENR 226
Query: 278 SEVTSAVV--RQNLRPEIPRCCPSSLANVMKR 307
+ ++ + NL P + + L ++KR
Sbjct: 227 KKTIDKILKCKLNLPPYLTQEARDLLKKLLKR 258
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 106/232 (45%), Gaps = 28/232 (12%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGL--YDGHDVAVKLLDWGEEGHRTEAEIAALRSAFT 102
WE+ P + S + G +G+V GH VAVK L ++ I A R+
Sbjct: 14 WEV-PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKL-----SRPFQSIIHAKRT--Y 65
Query: 103 QEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLI 162
+E+ + + H NV + + L E V + V +L G L +
Sbjct: 66 RELRLLKHMKHENVIGLLDVFTPARSLE---EFNDVYL--------VTHLMGADLNNIV- 113
Query: 163 KNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVE 222
+ KL V L + RGL Y+HS I+HRD+K N+ ++++ +KI DFG+AR
Sbjct: 114 --KCAKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-- 169
Query: 223 ASNPNDMTGETGTLGYMAPEV-LNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
++MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 170 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 220
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 120/272 (44%), Gaps = 36/272 (13%)
Query: 46 EIEPSKLVIKSVIARGTFGTVHR-----GLYDGHDVAVKLLDWGEEGHRTEAEIA--ALR 98
+I P + V+ +G +G V + G G A+K+L +A I A
Sbjct: 13 KIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLK--------KAMIVRNAKD 64
Query: 99 SAFTQ-EVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGAL 157
+A T+ E + ++ HP + I A +L++ ++EYL GG L
Sbjct: 65 TAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYL----------------ILEYLSGGEL 108
Query: 158 KTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFG 217
++ R +++ L +LH + I++RD+K EN++L+ VK+ DFG
Sbjct: 109 --FMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFG 166
Query: 218 VARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSF 277
+ + + GT+ YMAPE+L + +NR D +S G ++++ P+ +
Sbjct: 167 LCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENR 226
Query: 278 SEVTSAVV--RQNLRPEIPRCCPSSLANVMKR 307
+ ++ + NL P + + L ++KR
Sbjct: 227 KKTIDKILKCKLNLPPYLTQEARDLLKKLLKR 258
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 86/180 (47%), Gaps = 23/180 (12%)
Query: 145 CCVVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENML 204
+V+EY+PGG + ++L R + A + YLHS +++RD+K EN+L
Sbjct: 117 LYMVMEYVPGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 174
Query: 205 LDKNRTVKIADFGVARVEASNPNDMTGET----GTLGYMAPEVLNGNPYNRKCDVYSFGI 260
+D+ +++ DFG A+ + G T GT Y+APE++ YN+ D ++ G+
Sbjct: 175 IDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 261 CLWEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
++E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 228 LIYEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+KL V L + RGL Y+HS I+HRD+K N+ ++++ +KI DFG+AR
Sbjct: 122 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLAR---HTD 178
Query: 227 NDMTGETGTLGYMAPEV-LNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
++MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 179 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 226
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+KL V L + RGL Y+HS I+HRD+K N+ ++++ +KI DFG+AR
Sbjct: 131 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR---HTD 187
Query: 227 NDMTGETGTLGYMAPEV-LNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
++MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 188 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 235
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 90/186 (48%), Gaps = 35/186 (18%)
Query: 145 CCVVVEYLPGGALKTYLIKNRR------RKLAFKVVVQLALDLARGLSYLHSQKIVHRDV 198
+V+EY+PGG + ++L + R R A ++V+ YLHS +++RD+
Sbjct: 109 LYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTF--------EYLHSLDLIYRDL 160
Query: 199 KTENMLLDKNRTVKIADFGVARVEASNPNDMTGET----GTLGYMAPEVLNGNPYNRKCD 254
K EN+L+D+ +++ DFG A+ + G T GT Y+APE++ YN+ D
Sbjct: 161 KPENLLIDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVD 213
Query: 255 VYSFGICLWEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWD 310
++ G+ ++E+ P+ P + ++ S VR P S L ++++
Sbjct: 214 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQ 267
Query: 311 ANPDKR 316
+ KR
Sbjct: 268 VDLTKR 273
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 105/228 (46%), Gaps = 30/228 (13%)
Query: 55 KSVIARGTFGTVHRGLYDG--HDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLD 112
K ++ RG V R ++ + AVK++D G + E+ LR A +EV + K+
Sbjct: 22 KEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVS 81
Query: 113 -HPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAF 171
HPN+ IQ ++ + +V + + G L YL + L+
Sbjct: 82 GHPNI--------------IQLKD--TYETNTFFFLVFDLMKKGELFDYL--TEKVTLSE 123
Query: 172 KVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTG 231
K ++ L + LH IVHRD+K EN+LLD + +K+ DFG + +P +
Sbjct: 124 KETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSC--QLDPGEKLR 181
Query: 232 ET-GTLGYMAPEVL------NGNPYNRKCDVYSFGICLWEIYCCDMPY 272
E GT Y+APE++ N Y ++ D++S G+ ++ + P+
Sbjct: 182 EVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+KL V L + RGL Y+HS I+HRD+K N+ ++++ +KI DFG+AR
Sbjct: 126 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLAR---HTD 182
Query: 227 NDMTGETGTLGYMAPEV-LNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
++MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 183 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 230
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+KL V L + RGL Y+HS I+HRD+K N+ ++++ +KI DFG+AR
Sbjct: 125 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR---HTD 181
Query: 227 NDMTGETGTLGYMAPEV-LNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
++MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 182 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 229
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+KL V L + RGL Y+HS I+HRD+K N+ ++++ +KI DFG+AR
Sbjct: 125 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR---HTD 181
Query: 227 NDMTGETGTLGYMAPEV-LNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
++MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 182 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 229
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 105/228 (46%), Gaps = 30/228 (13%)
Query: 55 KSVIARGTFGTVHRGLYDG--HDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLD 112
K ++ RG V R ++ + AVK++D G + E+ LR A +EV + K+
Sbjct: 9 KEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVS 68
Query: 113 -HPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAF 171
HPN+ IQ ++ + +V + + G L YL + L+
Sbjct: 69 GHPNI--------------IQLKDTYET--NTFFFLVFDLMKKGELFDYL--TEKVTLSE 110
Query: 172 KVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTG 231
K ++ L + LH IVHRD+K EN+LLD + +K+ DFG + +P +
Sbjct: 111 KETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSC--QLDPGEKLR 168
Query: 232 ET-GTLGYMAPEVL------NGNPYNRKCDVYSFGICLWEIYCCDMPY 272
E GT Y+APE++ N Y ++ D++S G+ ++ + P+
Sbjct: 169 EVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 216
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 85/180 (47%), Gaps = 23/180 (12%)
Query: 145 CCVVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENML 204
+V+EY PGG + ++L R + A + YLHS +++RD+K EN++
Sbjct: 116 LYMVMEYAPGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLM 173
Query: 205 LDKNRTVKIADFGVARVEASNPNDMTGET----GTLGYMAPEVLNGNPYNRKCDVYSFGI 260
+D+ +K+ DFG A+ + G T GT Y+APE++ YN+ D ++ G+
Sbjct: 174 IDQQGYIKVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 261 CLWEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
++E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 227 LIYEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 103/227 (45%), Gaps = 28/227 (12%)
Query: 55 KSVIARGTFGTVHRGLYDG--HDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLD 112
K ++ RG V R ++ + AVK++D G + E+ LR A +EV + K+
Sbjct: 22 KEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVS 81
Query: 113 -HPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAF 171
HPN+ IQ ++ + +V + + G L YL + L+
Sbjct: 82 GHPNI--------------IQLKDTYET--NTFFFLVFDLMKKGELFDYL--TEKVTLSE 123
Query: 172 KVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTG 231
K ++ L + LH IVHRD+K EN+LLD + +K+ DFG + + +
Sbjct: 124 KETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFS-CQLDPGEKLRS 182
Query: 232 ETGTLGYMAPEVL------NGNPYNRKCDVYSFGICLWEIYCCDMPY 272
GT Y+APE++ N Y ++ D++S G+ ++ + P+
Sbjct: 183 VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 106/232 (45%), Gaps = 28/232 (12%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGL--YDGHDVAVKLLDWGEEGHRTEAEIAALRSAFT 102
WE+ P + S + G +G+V GH VAVK L ++ I A R+
Sbjct: 38 WEV-PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKL-----SRPFQSIIHAKRT--Y 89
Query: 103 QEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLI 162
+E+ + + H NV + + L E V + V +L G L +
Sbjct: 90 RELRLLKHMKHENVIGLLDVFTPARSLE---EFNDVYL--------VTHLMGADLNNIV- 137
Query: 163 KNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVE 222
+ +KL V L + RGL Y+HS I+HRD+K N+ ++++ +KI DFG+AR
Sbjct: 138 --KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-- 193
Query: 223 ASNPNDMTGETGTLGYMAPEV-LNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
++M G T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 194 -HTDDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 244
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 85/180 (47%), Gaps = 23/180 (12%)
Query: 145 CCVVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENML 204
+V+EY PGG + ++L R + A + YLHS +++RD+K EN++
Sbjct: 117 LYMVMEYAPGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLM 174
Query: 205 LDKNRTVKIADFGVARVEASNPNDMTGET----GTLGYMAPEVLNGNPYNRKCDVYSFGI 260
+D+ +K+ DFG A+ + G T GT Y+APE++ YN+ D ++ G+
Sbjct: 175 IDQQGYIKVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 261 CLWEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
++E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 228 LIYEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 108/233 (46%), Gaps = 30/233 (12%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGLYD---GHDVAVKLLDWGEEGHRTEAEIAALRSAF 101
WE+ P + S + G +G+V YD G +AVK L ++ I A R+
Sbjct: 47 WEV-PERYQTLSPVGSGAYGSVCSS-YDVKSGLKIAVKKL-----SRPFQSIIHAKRTY- 98
Query: 102 TQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYL 161
+E+ + + H NV + ++ L E V + V +L G L +
Sbjct: 99 -RELRLLKHMKHENVIGLLDVFTPATSLE---EFNDVYL--------VTHLMGADLNNIV 146
Query: 162 IKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARV 221
+ +KL V L + RGL Y+HS I+HRD+K N+ ++++ +KI DFG+AR
Sbjct: 147 ---KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR- 202
Query: 222 EASNPNDMTGETGTLGYMAPEV-LNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
++MTG T Y APE+ LN YN D++S G + E+ +P
Sbjct: 203 --HTDDEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFP 253
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 87/180 (48%), Gaps = 23/180 (12%)
Query: 145 CCVVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENML 204
+V+EY PGG + ++L R + + A + YLHS +++RD+K EN++
Sbjct: 116 LYMVMEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLM 173
Query: 205 LDKNRTVKIADFGVARVEASNPNDMTGET----GTLGYMAPEVLNGNPYNRKCDVYSFGI 260
+D+ +++ DFG+A+ + G T GT Y+APE++ YN+ D ++ G+
Sbjct: 174 IDQQGYIQVTDFGLAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 261 CLWEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
++E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 227 LIYEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 86/178 (48%), Gaps = 25/178 (14%)
Query: 99 SAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALK 158
S+ E+AV K+ H N+ ++ ++ V++ + GG L
Sbjct: 51 SSLENEIAVLKKIKHENIVTLEDIYESTTHYYL----------------VMQLVSGGELF 94
Query: 159 TYLI-KNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLL---DKNRTVKIA 214
++ + + +V+Q L + YLH IVHRD+K EN+L ++N + I
Sbjct: 95 DRILERGVYTEKDASLVIQQVLS---AVKYLHENGIVHRDLKPENLLYLTPEENSKIMIT 151
Query: 215 DFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPY 272
DFG++++E + M+ GT GY+APEVL PY++ D +S G+ + + C P+
Sbjct: 152 DFGLSKMEQNGI--MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPF 207
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 103/225 (45%), Gaps = 25/225 (11%)
Query: 98 RSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGAL 157
R +EV++ ++ HPNV LH EN +++E + GG L
Sbjct: 58 REDIEREVSILKEIQHPNVIT----------LHEVYEN------KTDVILILELVAGGEL 101
Query: 158 KTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTEN-MLLDKNR---TVKI 213
+L + + L + + + G+ YLHS +I H D+K EN MLLD+N +KI
Sbjct: 102 FDFLAE--KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 214 ADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
DFG+A + N+ GT ++APE++N P + D++S G+ + + P+
Sbjct: 160 IDFGLAH-KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
Query: 274 DLSFSEVTSAVVRQNLRPEIPRCC-PSSLA-NVMKRCWDANPDKR 316
+ E + V N E S+LA + ++R +P KR
Sbjct: 219 GDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR 263
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 121/279 (43%), Gaps = 48/279 (17%)
Query: 58 IARGTFGTVHRGLYDGHD---VAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHP 114
I G FG V R + D VAVK ++ GE+ + +E+ L HP
Sbjct: 26 IGSGNFG-VARLMRDKQSNELVAVKYIERGEK----------IDENVKREIINHRSLRHP 74
Query: 115 NVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIK-NRRRKLAFKV 173
N+ +F + + L +V+EY GG L + R + +
Sbjct: 75 NIVRFKEVILTPTHL----------------AIVMEYASGGELFERICNAGRFSEDEARF 118
Query: 174 VVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRT--VKIADFGVAR--VEASNPNDM 229
Q L G+SY H+ ++ HRD+K EN LLD + +KI DFG ++ V S P
Sbjct: 119 FFQ---QLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPK-- 173
Query: 230 TGETGTLGYMAPEVLNGNPYNRK-CDVYSFGICLWEIYCCDMPYPD----LSFSEVTSAV 284
GT Y+APEVL Y+ K DV+S G+ L+ + P+ D +F + +
Sbjct: 174 -STVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRI 232
Query: 285 VR-QNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 322
+ Q P+ P +++ R + A+P KR + E+
Sbjct: 233 LNVQYAIPDYVHISPEC-RHLISRIFVADPAKRISIPEI 270
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 106/232 (45%), Gaps = 28/232 (12%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGL--YDGHDVAVKLLDWGEEGHRTEAEIAALRSAFT 102
WE+ P + S + G +G+V GH VAVK L ++ I A R+
Sbjct: 18 WEV-PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKL-----SRPFQSIIHAKRT--Y 69
Query: 103 QEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLI 162
+E+ + + H NV + + L E V + V +L G L +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLE---EFNDVYL--------VTHLMGADLNNIV- 117
Query: 163 KNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVE 222
+ +KL V L + RGL Y+HS I+HRD+K N+ ++++ +KI DFG+AR
Sbjct: 118 --KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-- 173
Query: 223 ASNPNDMTGETGTLGYMAPEV-LNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
++M G T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 174 -HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+KL V L + RGL Y+HS I+HRD+K N+ ++++ +KI DFG+AR
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 176
Query: 227 NDMTGETGTLGYMAPEV-LNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
++MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 177 DEMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 69/127 (54%), Gaps = 7/127 (5%)
Query: 148 VVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDK 207
+V +L G L + + +KL V L + RGL Y+HS I+HRD+K N+ +++
Sbjct: 104 LVTHLMGADLNNIV---KXQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
Query: 208 NRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEV-LNGNPYNRKCDVYSFGICLWEIY 266
+ +KI DFG+AR ++MTG T Y APE+ LN YN+ D++S G + E+
Sbjct: 161 DCELKILDFGLAR---HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 267 CCDMPYP 273
+P
Sbjct: 218 TGRTLFP 224
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 62/108 (57%), Gaps = 4/108 (3%)
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+KL V L + RGL Y+HS I+HRD+K N+ ++++ +KI DFG+AR A
Sbjct: 127 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTA--- 183
Query: 227 NDMTGETGTLGYMAPEV-LNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
++MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 184 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 231
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 106/232 (45%), Gaps = 28/232 (12%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGL--YDGHDVAVKLLDWGEEGHRTEAEIAALRSAFT 102
WE+ P + S + G +G+V GH VAVK L ++ I A R+
Sbjct: 18 WEV-PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKL-----SRPFQSIIHAKRT--Y 69
Query: 103 QEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLI 162
+E+ + + H NV + + L E V + V +L G L +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLE---EFNDVYL--------VTHLMGADLNNIV- 117
Query: 163 KNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVE 222
+ +KL V L + RGL Y+HS I+HRD+K N+ ++++ +KI DFG+AR
Sbjct: 118 --KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-- 173
Query: 223 ASNPNDMTGETGTLGYMAPEV-LNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
++M G T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 174 -HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 62/108 (57%), Gaps = 4/108 (3%)
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+KL V L + RGL Y+HS I+HRD+K N+ ++++ +KI DFG+AR A
Sbjct: 127 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTA--- 183
Query: 227 NDMTGETGTLGYMAPEV-LNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
++MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 184 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 231
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 98/214 (45%), Gaps = 35/214 (16%)
Query: 58 IARGTFGTVHRGL--YDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPN 115
+ GT+G V++ + VA+K + R E E + +EV++ +L H N
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRI-------RLEHEEEGVPGTAIREVSLLKELQHRN 94
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVV 175
+ + + LH+ E + LK Y+ KN ++ +V+
Sbjct: 95 IIELKSVIHHNHRLHLIFEYAE-----------------NDLKKYMDKNP--DVSMRVIK 135
Query: 176 QLALDLARGLSYLHSQKIVHRDVKTENMLL---DKNRT--VKIADFGVARVEASNPNDMT 230
L G+++ HS++ +HRD+K +N+LL D + T +KI DFG+AR T
Sbjct: 136 SFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFT 195
Query: 231 GETGTLGYMAPEVLNGN-PYNRKCDVYSFGICLW 263
E TL Y PE+L G+ Y+ D++S C+W
Sbjct: 196 HEIITLWYRPPEILLGSRHYSTSVDIWSIA-CIW 228
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 62/108 (57%), Gaps = 4/108 (3%)
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+KL V L + RGL Y+HS I+HRD+K N+ ++++ +KI DFG+AR A
Sbjct: 127 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTA--- 183
Query: 227 NDMTGETGTLGYMAPEV-LNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
++MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 184 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 231
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 114/248 (45%), Gaps = 32/248 (12%)
Query: 32 GKASNFLKKQ--RQDWEIEPSKLVIKSVIARGTFGTVHRGLYDG---HDVAVKLLDWGEE 86
G + F +++ + WE+ P +L + G +G+V YD VAVK L
Sbjct: 9 GPRAGFYRQELNKTVWEV-PQRLQGLRPVGSGAYGSVCSA-YDARLRQKVAVKKL----- 61
Query: 87 GHRTEAEIAALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICC 146
++ I A R+ +E+ + L H NV + ++ + +E
Sbjct: 62 SRPFQSLIHARRT--YRELRLLKHLKHENVIGLLDVFTPATSIEDFSE-----------V 108
Query: 147 VVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLD 206
+V L G L + + + L+ + V L L RGL Y+HS I+HRD+K N+ ++
Sbjct: 109 YLVTTLMGADLNNIV---KSQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVN 165
Query: 207 KNRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEV-LNGNPYNRKCDVYSFGICLWEI 265
++ ++I DFG+AR +MTG T Y APE+ LN YN+ D++S G + E+
Sbjct: 166 EDSELRILDFGLAR---QADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 222
Query: 266 YCCDMPYP 273
+P
Sbjct: 223 LQGKALFP 230
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 86/180 (47%), Gaps = 23/180 (12%)
Query: 145 CCVVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENML 204
+V+EY PGG + ++L R + + A + YLHS +++RD+K EN++
Sbjct: 116 LYMVMEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLM 173
Query: 205 LDKNRTVKIADFGVARVEASNPNDMTGET----GTLGYMAPEVLNGNPYNRKCDVYSFGI 260
+D+ +++ DFG A+ + G T GT Y+APE++ YN+ D ++ G+
Sbjct: 174 IDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 261 CLWEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
++E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 227 LIYEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 78/173 (45%), Gaps = 7/173 (4%)
Query: 181 LARGLSYLHSQKIVHRDVKTENMLLD---KNRTVKIADFGVARVEASNPNDMTGETGTLG 237
+ ++++H IVHRD+K EN+LL K VK+ADFG+A G GT G
Sbjct: 139 ILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPG 198
Query: 238 YMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPD---LSFSEVTSAVVRQNLRPEIP 294
Y++PEVL +PY + D+++ G+ L+ + P+ D + A PE
Sbjct: 199 YLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWD 258
Query: 295 RCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTSKGGGMIPGDQPQGCL 347
P + N++ + NP KR D+ + S M+ + CL
Sbjct: 259 TVTPEA-KNLINQMLTINPAKRITADQALKHPWVCQRSTVASMMHRQETVECL 310
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 98/224 (43%), Gaps = 27/224 (12%)
Query: 102 TQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYL 161
T E+A+ +++H N+ K + + E G L +
Sbjct: 77 TLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKH-----------------GSGLDLFA 119
Query: 162 IKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARV 221
+R +L + + L + YL + I+HRD+K EN+++ ++ T+K+ DFG A
Sbjct: 120 FIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAY 179
Query: 222 EASNPNDMTGETGTLGYMAPEVLNGNPY-NRKCDVYSFGICLWEIYCCDMPYPDLSFSEV 280
T GT+ Y APEVL GNPY + +++S G+ L+ + + P+ +L
Sbjct: 180 LERGKLFYTF-CGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCEL----- 233
Query: 281 TSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVS 324
V + P P L +++ P++R ++++V+
Sbjct: 234 -EETVEAAIHP--PYLVSKELMSLVSGLLQPVPERRTTLEKLVT 274
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 106/232 (45%), Gaps = 28/232 (12%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGL--YDGHDVAVKLLDWGEEGHRTEAEIAALRSAFT 102
WE+ P + S + G +G+V GH VAVK L ++ I A R+
Sbjct: 14 WEV-PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKL-----SRPFQSIIHAKRT--Y 65
Query: 103 QEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLI 162
+E+ + + H NV + + L E V + V +L G L +
Sbjct: 66 RELRLLKHMKHENVIGLLDVFTPARSLE---EFNDVYL--------VTHLMGADLNNIV- 113
Query: 163 KNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVE 222
+ +KL V L + RGL Y+HS I+HRD+K N+ ++++ +KI DFG+AR
Sbjct: 114 --KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-- 169
Query: 223 ASNPNDMTGETGTLGYMAPEV-LNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
++M G T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 170 -HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 220
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 68/127 (53%), Gaps = 7/127 (5%)
Query: 148 VVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDK 207
+V +L G L + + +KL V L + RGL Y+HS I+HRD+K N+ +++
Sbjct: 104 LVTHLMGADLNNIV---KSQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
Query: 208 NRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEV-LNGNPYNRKCDVYSFGICLWEIY 266
+ +KI DFG+ R ++MTG T Y APE+ LN YN+ D++S G + E+
Sbjct: 161 DSELKILDFGLCR---HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 267 CCDMPYP 273
+P
Sbjct: 218 TGRTLFP 224
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 83/179 (46%), Gaps = 30/179 (16%)
Query: 169 LAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPND 228
L ++VV + + G+ + HS I+HRD+K EN+L+ ++ VK+ DFG AR A+
Sbjct: 121 LDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEV 180
Query: 229 MTGETGTLGYMAPEVLNGN-PYNRKCDVYSFGICLWEIYCCDMPYP-DLSFSEVTSAVV- 285
E T Y APE+L G+ Y + DV++ G + E++ + +P D ++ ++
Sbjct: 181 YDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMC 240
Query: 286 -------RQNL-----------RPEIPRCCP---------SSLANVMKRCWDANPDKRP 317
Q L PEI P + ++ K+C +PDKRP
Sbjct: 241 LGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRP 299
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 121/279 (43%), Gaps = 48/279 (17%)
Query: 58 IARGTFGTVHRGLYDGHD---VAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHP 114
I G FG V R + D VAVK ++ GE+ + +E+ L HP
Sbjct: 27 IGSGNFG-VARLMRDKQSNELVAVKYIERGEK----------IDENVKREIINHRSLRHP 75
Query: 115 NVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIK-NRRRKLAFKV 173
N+ +F + + L +V+EY GG L + R + +
Sbjct: 76 NIVRFKEVILTPTHL----------------AIVMEYASGGELFERICNAGRFSEDEARF 119
Query: 174 VVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRT--VKIADFGVAR--VEASNPNDM 229
Q L G+SY H+ ++ HRD+K EN LLD + +KI FG ++ V S P D
Sbjct: 120 FFQ---QLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDT 176
Query: 230 TGETGTLGYMAPEVLNGNPYNRK-CDVYSFGICLWEIYCCDMPYPD----LSFSEVTSAV 284
GT Y+APEVL Y+ K DV+S G+ L+ + P+ D +F + +
Sbjct: 177 ---VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRI 233
Query: 285 VR-QNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 322
+ Q P+ P +++ R + A+P KR + E+
Sbjct: 234 LNVQYAIPDYVHISPEC-RHLISRIFVADPAKRISIPEI 271
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 86/180 (47%), Gaps = 23/180 (12%)
Query: 145 CCVVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENML 204
+V+EY+ GG + ++L R + A A + YLHS +++RD+K EN+L
Sbjct: 116 LYMVMEYVAGGEMFSHL--RRIGRFAEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 205 LDKNRTVKIADFGVARVEASNPNDMTGET----GTLGYMAPEVLNGNPYNRKCDVYSFGI 260
+D+ +++ DFG A+ + G T GT Y+APE++ YN+ D ++ G+
Sbjct: 174 IDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 261 CLWEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
++E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 227 LIYEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 102/225 (45%), Gaps = 25/225 (11%)
Query: 98 RSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGAL 157
R +EV++ ++ HPNV LH EN ++ E + GG L
Sbjct: 58 REDIEREVSILKEIQHPNVIT----------LHEVYEN------KTDVILIGELVAGGEL 101
Query: 158 KTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTEN-MLLDKNR---TVKI 213
+L + + L + + + G+ YLHS +I H D+K EN MLLD+N +KI
Sbjct: 102 FDFLAE--KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 214 ADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
DFG+A + N+ GT ++APE++N P + D++S G+ + + P+
Sbjct: 160 IDFGLAH-KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
Query: 274 DLSFSEVTSAVVRQNLRPEIPRCC-PSSLA-NVMKRCWDANPDKR 316
+ E + V N E S+LA + ++R +P KR
Sbjct: 219 GDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR 263
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 58/105 (55%), Gaps = 12/105 (11%)
Query: 173 VVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMT-- 230
V + + + +A + +LHS+ ++HRD+K N+ + VK+ DFG+ + + T
Sbjct: 165 VCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVL 224
Query: 231 ----------GETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEI 265
G+ GT YM+PE ++GN Y+ K D++S G+ L+E+
Sbjct: 225 TPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFEL 269
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+KL V L + RGL Y+HS I+HRD+K N+ ++++ +KI DFG+AR
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 176
Query: 227 NDMTGETGTLGYMAPEV-LNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
++MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 177 DEMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+KL V L + RGL Y+HS I+HRD+K N+ ++++ +KI DFG+AR
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 176
Query: 227 NDMTGETGTLGYMAPEV-LNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
++MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+KL V L + RGL Y+HS I+HRD+K N+ ++++ +KI DFG+AR
Sbjct: 126 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 182
Query: 227 NDMTGETGTLGYMAPEV-LNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
++MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 183 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 230
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+KL V L + RGL Y+HS I+HRD+K N+ ++++ +KI DFG+AR
Sbjct: 122 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 178
Query: 227 NDMTGETGTLGYMAPEV-LNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
++MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 179 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 226
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+KL V L + RGL Y+HS I+HRD+K N+ ++++ +KI DFG+AR
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 176
Query: 227 NDMTGETGTLGYMAPEV-LNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
++MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+KL V L + RGL Y+HS I+HRD+K N+ ++++ +KI DFG+AR
Sbjct: 132 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 188
Query: 227 NDMTGETGTLGYMAPEV-LNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
++MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 189 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 236
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 94/223 (42%), Gaps = 27/223 (12%)
Query: 57 VIARGTFGTVHRGL--YDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHP 114
VI +G F V R + G AVK++D + L+ +E ++ H L HP
Sbjct: 33 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLK----REASICHMLKHP 88
Query: 115 NVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFK-- 172
++ + L + +G + M V E++ G L ++K +
Sbjct: 89 HIVEL---------LETYSSDGMLYM-------VFEFMDGADLCFEIVKRADAGFVYSEA 132
Query: 173 VVVQLALDLARGLSYLHSQKIVHRDVKTENMLL---DKNRTVKIADFGVARVEASNPNDM 229
V + L Y H I+HRDVK +LL + + VK+ FGVA +
Sbjct: 133 VASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVA 192
Query: 230 TGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPY 272
G GT +MAPEV+ PY + DV+ G+ L+ + +P+
Sbjct: 193 GGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 235
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+KL V L + RGL Y+HS I+HRD+K N+ ++++ +KI DFG+AR
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 176
Query: 227 NDMTGETGTLGYMAPEV-LNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
++MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+KL V L + RGL Y+HS I+HRD+K N+ ++++ +KI DFG+AR
Sbjct: 132 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 188
Query: 227 NDMTGETGTLGYMAPEV-LNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
++MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 189 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 236
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 106/232 (45%), Gaps = 28/232 (12%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGL--YDGHDVAVKLLDWGEEGHRTEAEIAALRSAFT 102
WE+ P + S + G +G+V GH VAVK L ++ I A R+
Sbjct: 18 WEV-PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKL-----SRPFQSIIHAKRT--Y 69
Query: 103 QEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLI 162
+E+ + + H NV + + L E V + V +L G L +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLE---EFNDVYL--------VTHLMGADLNNIV- 117
Query: 163 KNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVE 222
+ +KL V L + RGL Y+HS I+HRD+K N+ ++++ +KI DF +AR
Sbjct: 118 --KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLAR-- 173
Query: 223 ASNPNDMTGETGTLGYMAPEV-LNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
++MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 174 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+KL V L + RGL Y+HS I+HRD+K N+ ++++ +KI DFG+AR
Sbjct: 126 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 182
Query: 227 NDMTGETGTLGYMAPEV-LNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
++MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 183 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 230
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+KL V L + RGL Y+HS I+HRD+K N+ ++++ +KI DFG+AR
Sbjct: 132 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 188
Query: 227 NDMTGETGTLGYMAPEV-LNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
++MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 189 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 236
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+KL V L + RGL Y+HS I+HRD+K N+ ++++ +KI DFG+AR
Sbjct: 143 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 199
Query: 227 NDMTGETGTLGYMAPEV-LNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
++MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 200 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 247
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+KL V L + RGL Y+HS I+HRD+K N+ ++++ +KI DFG+AR
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 176
Query: 227 NDMTGETGTLGYMAPEV-LNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
++MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+KL V L + RGL Y+HS I+HRD+K N+ ++++ +KI DFG+AR
Sbjct: 131 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 187
Query: 227 NDMTGETGTLGYMAPEV-LNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
++MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 188 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 235
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+KL V L + RGL Y+HS I+HRD+K N+ ++++ +KI DFG+AR
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 176
Query: 227 NDMTGETGTLGYMAPEV-LNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
++MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+KL V L + RGL Y+HS I+HRD+K N+ ++++ +KI DFG+AR
Sbjct: 125 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 181
Query: 227 NDMTGETGTLGYMAPEV-LNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
++MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 182 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 229
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+KL V L + RGL Y+HS I+HRD+K N+ ++++ +KI DFG+AR
Sbjct: 119 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 175
Query: 227 NDMTGETGTLGYMAPEV-LNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
++MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 176 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 223
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+KL V L + RGL Y+HS I+HRD+K N+ ++++ +KI DFG+AR
Sbjct: 122 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 178
Query: 227 NDMTGETGTLGYMAPEV-LNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
++MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 179 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 226
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+KL V L + RGL Y+HS I+HRD+K N+ ++++ +KI DFG+AR
Sbjct: 127 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 183
Query: 227 NDMTGETGTLGYMAPEV-LNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
++MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 184 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 231
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+KL V L + RGL Y+HS I+HRD+K N+ ++++ +KI DFG+AR
Sbjct: 139 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 195
Query: 227 NDMTGETGTLGYMAPEV-LNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
++MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 196 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 243
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+KL V L + RGL Y+HS I+HRD+K N+ ++++ +KI DFG+AR
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 176
Query: 227 NDMTGETGTLGYMAPEV-LNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
++MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 71/141 (50%), Gaps = 16/141 (11%)
Query: 174 VVQLALDLAR----------GLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEA 223
V+Q+ LD R G+ +LHS I+HRD+K N+++ + T+KI DFG+AR A
Sbjct: 118 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-A 176
Query: 224 SNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA 283
M E T Y APEV+ G Y D++S G + E+ C + +P + + +
Sbjct: 177 GTSFMMEPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNK 236
Query: 284 VVRQNLRPEIPRCCPSSLANV 304
V+ Q P CP+ + +
Sbjct: 237 VIEQLGTP-----CPAFMKKL 252
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+KL V L + RGL Y+HS I+HRD+K N+ ++++ +KI DFG+AR
Sbjct: 140 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 196
Query: 227 NDMTGETGTLGYMAPEV-LNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
++MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 197 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 244
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+KL V L + RGL Y+HS I+HRD+K N+ ++++ +KI DFG+AR
Sbjct: 122 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 178
Query: 227 NDMTGETGTLGYMAPEV-LNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
++MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 179 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 226
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 104/232 (44%), Gaps = 35/232 (15%)
Query: 104 EVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIK 163
E+ + KL+HP + K I + + +I V+E + GG L ++
Sbjct: 71 EIEILKKLNHPCIIK-IKNFFDAEDYYI----------------VLELMEGGELFDKVVG 113
Query: 164 NRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLL---DKNRTVKIADFGVAR 220
N+R K A + + LA + YLH I+HRD+K EN+LL +++ +KI DFG ++
Sbjct: 114 NKRLKEATCKLYFYQMLLA--VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 171
Query: 221 VEASNPNDMTGETGTLGYMAPEVL---NGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSF 277
+ + M GT Y+APEVL YNR D +S G+ L + C YP S
Sbjct: 172 I-LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL---FICLSGYPPFSE 227
Query: 278 SEVTSAVVRQ------NLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
++ Q N PE+ +++K+ +P R +E +
Sbjct: 228 HRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEAL 279
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+KL V L + RGL Y+HS I+HRD+K N+ ++++ +KI DFG+AR
Sbjct: 125 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 181
Query: 227 NDMTGETGTLGYMAPEV-LNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
++MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 182 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 229
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+KL V L + RGL Y+HS I+HRD+K N+ ++++ +KI DFG+AR
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 176
Query: 227 NDMTGETGTLGYMAPEV-LNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
++MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+KL V L + RGL Y+HS I+HRD+K N+ ++++ +KI DFG+AR
Sbjct: 117 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 173
Query: 227 NDMTGETGTLGYMAPEV-LNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
++MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 174 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 221
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+KL V L + RGL Y+HS I+HRD+K N+ ++++ +KI DFG+AR
Sbjct: 117 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 173
Query: 227 NDMTGETGTLGYMAPEV-LNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
++MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 174 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 221
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 82/173 (47%), Gaps = 21/173 (12%)
Query: 103 QEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLI 162
+E+ + L+H NV KF G NI + +EY GG L +
Sbjct: 53 KEIXINKMLNHENVVKFYGHRR----------------EGNIQYLFLEYCSGGELFDRIE 96
Query: 163 KNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVE 222
+ + + L G+ YLH I HRD+K EN+LLD+ +KI+DFG+A V
Sbjct: 97 PDI--GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF 154
Query: 223 ASNPND--MTGETGTLGYMAPEVLNGNPYNRK-CDVYSFGICLWEIYCCDMPY 272
N + + GTL Y+APE+L ++ + DV+S GI L + ++P+
Sbjct: 155 RYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+KL V L + RGL Y+HS I+HRD+K N+ ++++ +KI DFG+AR
Sbjct: 118 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 174
Query: 227 NDMTGETGTLGYMAPEV-LNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
++MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 175 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 222
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+KL V L + RGL Y+HS I+HRD+K N+ ++++ +KI DFG+AR
Sbjct: 116 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 172
Query: 227 NDMTGETGTLGYMAPEV-LNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
++MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 173 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 220
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 94/223 (42%), Gaps = 27/223 (12%)
Query: 57 VIARGTFGTVHRGL--YDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHP 114
VI +G F V R + G AVK++D + L+ +E ++ H L HP
Sbjct: 31 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLK----REASICHMLKHP 86
Query: 115 NVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFK-- 172
++ + L + +G + M V E++ G L ++K +
Sbjct: 87 HIVEL---------LETYSSDGMLYM-------VFEFMDGADLCFEIVKRADAGFVYSEA 130
Query: 173 VVVQLALDLARGLSYLHSQKIVHRDVKTENMLL---DKNRTVKIADFGVARVEASNPNDM 229
V + L Y H I+HRDVK +LL + + VK+ FGVA +
Sbjct: 131 VASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVA 190
Query: 230 TGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPY 272
G GT +MAPEV+ PY + DV+ G+ L+ + +P+
Sbjct: 191 GGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 233
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 82/173 (47%), Gaps = 21/173 (12%)
Query: 103 QEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLI 162
+E+ + L+H NV KF G NI + +EY GG L +
Sbjct: 53 KEICINKMLNHENVVKFYGHRR----------------EGNIQYLFLEYCSGGELFDRIE 96
Query: 163 KNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVE 222
+ + + L G+ YLH I HRD+K EN+LLD+ +KI+DFG+A V
Sbjct: 97 PDI--GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF 154
Query: 223 ASNPND--MTGETGTLGYMAPEVLNGNPYNRK-CDVYSFGICLWEIYCCDMPY 272
N + + GTL Y+APE+L ++ + DV+S GI L + ++P+
Sbjct: 155 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 82/173 (47%), Gaps = 21/173 (12%)
Query: 103 QEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLI 162
+E+ + L+H NV KF G NI + +EY GG L +
Sbjct: 54 KEICINKMLNHENVVKFYGHRR----------------EGNIQYLFLEYCSGGELFDRIE 97
Query: 163 KNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVE 222
+ + + L G+ YLH I HRD+K EN+LLD+ +KI+DFG+A V
Sbjct: 98 PDI--GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF 155
Query: 223 ASNPND--MTGETGTLGYMAPEVLNGNPYNRK-CDVYSFGICLWEIYCCDMPY 272
N + + GTL Y+APE+L ++ + DV+S GI L + ++P+
Sbjct: 156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 82/173 (47%), Gaps = 21/173 (12%)
Query: 103 QEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLI 162
+E+ + L+H NV KF G NI + +EY GG L +
Sbjct: 54 KEIXINKMLNHENVVKFYGHRR----------------EGNIQYLFLEYCSGGELFDRIE 97
Query: 163 KNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVE 222
+ + + L G+ YLH I HRD+K EN+LLD+ +KI+DFG+A V
Sbjct: 98 PDI--GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF 155
Query: 223 ASNPND--MTGETGTLGYMAPEVLNGNPYNRK-CDVYSFGICLWEIYCCDMPY 272
N + + GTL Y+APE+L ++ + DV+S GI L + ++P+
Sbjct: 156 RYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 4/98 (4%)
Query: 177 LALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETGTL 236
L L RGL Y+HS I+HRD+K N+ ++++ ++I DFG+AR +MTG T
Sbjct: 136 LVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLAR---QADEEMTGYVATR 192
Query: 237 GYMAPEV-LNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 193 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFP 230
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 86/180 (47%), Gaps = 23/180 (12%)
Query: 145 CCVVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENML 204
+V+EY+ GG + ++L R + + A + YLHS +++RD+K EN+L
Sbjct: 116 LYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 205 LDKNRTVKIADFGVARVEASNPNDMTGET----GTLGYMAPEVLNGNPYNRKCDVYSFGI 260
+D+ +++ DFG A+ + G T GT Y+APE++ YN+ D ++ G+
Sbjct: 174 IDQQGYIQVTDFGFAK-------RVKGRTWXLXGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 261 CLWEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
++E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 227 LIYEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 104/232 (44%), Gaps = 35/232 (15%)
Query: 104 EVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIK 163
E+ + KL+HP + K I + + +I V+E + GG L ++
Sbjct: 64 EIEILKKLNHPCIIK-IKNFFDAEDYYI----------------VLELMEGGELFDKVVG 106
Query: 164 NRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLL---DKNRTVKIADFGVAR 220
N+R K A + + LA + YLH I+HRD+K EN+LL +++ +KI DFG ++
Sbjct: 107 NKRLKEATCKLYFYQMLLA--VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 164
Query: 221 VEASNPNDMTGETGTLGYMAPEVL---NGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSF 277
+ + M GT Y+APEVL YNR D +S G+ L + C YP S
Sbjct: 165 I-LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL---FICLSGYPPFSE 220
Query: 278 SEVTSAVVRQ------NLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
++ Q N PE+ +++K+ +P R +E +
Sbjct: 221 HRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEAL 272
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 82/173 (47%), Gaps = 21/173 (12%)
Query: 103 QEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLI 162
+E+ + L+H NV KF G NI + +EY GG L +
Sbjct: 53 KEICINKMLNHENVVKFYGHRR----------------EGNIQYLFLEYCSGGELFDRIE 96
Query: 163 KNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVE 222
+ + + L G+ YLH I HRD+K EN+LLD+ +KI+DFG+A V
Sbjct: 97 PDI--GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF 154
Query: 223 ASNPND--MTGETGTLGYMAPEVLNGNPYNRK-CDVYSFGICLWEIYCCDMPY 272
N + + GTL Y+APE+L ++ + DV+S GI L + ++P+
Sbjct: 155 RYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 104/232 (44%), Gaps = 35/232 (15%)
Query: 104 EVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIK 163
E+ + KL+HP + K I + + +I V+E + GG L ++
Sbjct: 65 EIEILKKLNHPCIIK-IKNFFDAEDYYI----------------VLELMEGGELFDKVVG 107
Query: 164 NRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLL---DKNRTVKIADFGVAR 220
N+R K A + + LA + YLH I+HRD+K EN+LL +++ +KI DFG ++
Sbjct: 108 NKRLKEATCKLYFYQMLLA--VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 165
Query: 221 VEASNPNDMTGETGTLGYMAPEVL---NGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSF 277
+ + M GT Y+APEVL YNR D +S G+ L + C YP S
Sbjct: 166 I-LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL---FICLSGYPPFSE 221
Query: 278 SEVTSAVVRQ------NLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
++ Q N PE+ +++K+ +P R +E +
Sbjct: 222 HRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEAL 273
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 86/180 (47%), Gaps = 23/180 (12%)
Query: 145 CCVVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENML 204
+V+EY+ GG + ++L R + + A + YLHS +++RD+K EN+L
Sbjct: 116 LYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 205 LDKNRTVKIADFGVARVEASNPNDMTGET----GTLGYMAPEVLNGNPYNRKCDVYSFGI 260
+D+ +++ DFG A+ + G T GT Y+APE++ YN+ D ++ G+
Sbjct: 174 IDQQGYIQVTDFGFAK-------RVKGRTWXLAGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 261 CLWEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
++E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 227 LIYEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 104/232 (44%), Gaps = 35/232 (15%)
Query: 104 EVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIK 163
E+ + KL+HP + K I + + +I V+E + GG L ++
Sbjct: 65 EIEILKKLNHPCIIK-IKNFFDAEDYYI----------------VLELMEGGELFDKVVG 107
Query: 164 NRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLL---DKNRTVKIADFGVAR 220
N+R K A + + LA + YLH I+HRD+K EN+LL +++ +KI DFG ++
Sbjct: 108 NKRLKEATCKLYFYQMLLA--VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 165
Query: 221 VEASNPNDMTGETGTLGYMAPEVL---NGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSF 277
+ + M GT Y+APEVL YNR D +S G+ L + C YP S
Sbjct: 166 I-LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL---FICLSGYPPFSE 221
Query: 278 SEVTSAVVRQ------NLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
++ Q N PE+ +++K+ +P R +E +
Sbjct: 222 HRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEAL 273
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 87/179 (48%), Gaps = 23/179 (12%)
Query: 98 RSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGAL 157
R +EV++ ++ HPN+ LH EN +++E + GG L
Sbjct: 59 REEIEREVSILRQVLHPNIIT----------LHDVYEN------RTDVVLILELVSGGEL 102
Query: 158 KTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTEN-MLLDKNR---TVKI 213
+L + + L+ + + G++YLH++KI H D+K EN MLLDKN +K+
Sbjct: 103 FDFLAQ--KESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKL 160
Query: 214 ADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPY 272
DFG+A E + + GT ++APE++N P + D++S G+ + + P+
Sbjct: 161 IDFGLAH-EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 104/232 (44%), Gaps = 35/232 (15%)
Query: 104 EVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIK 163
E+ + KL+HP + K I + + +I V+E + GG L ++
Sbjct: 65 EIEILKKLNHPCIIK-IKNFFDAEDYYI----------------VLELMEGGELFDKVVG 107
Query: 164 NRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLL---DKNRTVKIADFGVAR 220
N+R K A + + LA + YLH I+HRD+K EN+LL +++ +KI DFG ++
Sbjct: 108 NKRLKEATCKLYFYQMLLA--VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 165
Query: 221 VEASNPNDMTGETGTLGYMAPEVL---NGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSF 277
+ + M GT Y+APEVL YNR D +S G+ L + C YP S
Sbjct: 166 I-LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL---FICLSGYPPFSE 221
Query: 278 SEVTSAVVRQ------NLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
++ Q N PE+ +++K+ +P R +E +
Sbjct: 222 HRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEAL 273
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 82/173 (47%), Gaps = 21/173 (12%)
Query: 103 QEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLI 162
+E+ + L+H NV KF G NI + +EY GG L +
Sbjct: 53 KEICINKMLNHENVVKFYGHRR----------------EGNIQYLFLEYCSGGELFDRIE 96
Query: 163 KNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVE 222
+ + + L G+ YLH I HRD+K EN+LLD+ +KI+DFG+A V
Sbjct: 97 PDI--GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF 154
Query: 223 ASNPND--MTGETGTLGYMAPEVLNGNPYNRK-CDVYSFGICLWEIYCCDMPY 272
N + + GTL Y+APE+L ++ + DV+S GI L + ++P+
Sbjct: 155 RYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 82/173 (47%), Gaps = 21/173 (12%)
Query: 103 QEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLI 162
+E+ + L+H NV KF G NI + +EY GG L +
Sbjct: 54 KEICINKMLNHENVVKFYGHRR----------------EGNIQYLFLEYCSGGELFDRIE 97
Query: 163 KNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVE 222
+ + + L G+ YLH I HRD+K EN+LLD+ +KI+DFG+A V
Sbjct: 98 PDI--GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF 155
Query: 223 ASNPND--MTGETGTLGYMAPEVLNGNPYNRK-CDVYSFGICLWEIYCCDMPY 272
N + + GTL Y+APE+L ++ + DV+S GI L + ++P+
Sbjct: 156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 82/173 (47%), Gaps = 21/173 (12%)
Query: 103 QEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLI 162
+E+ + L+H NV KF G NI + +EY GG L +
Sbjct: 54 KEICINKMLNHENVVKFYGHRR----------------EGNIQYLFLEYCSGGELFDRIE 97
Query: 163 KNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVE 222
+ + + L G+ YLH I HRD+K EN+LLD+ +KI+DFG+A V
Sbjct: 98 PDI--GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF 155
Query: 223 ASNPND--MTGETGTLGYMAPEVLNGNPYNRK-CDVYSFGICLWEIYCCDMPY 272
N + + GTL Y+APE+L ++ + DV+S GI L + ++P+
Sbjct: 156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 82/173 (47%), Gaps = 21/173 (12%)
Query: 103 QEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLI 162
+E+ + L+H NV KF G NI + +EY GG L +
Sbjct: 54 KEICINKMLNHENVVKFYGHRR----------------EGNIQYLFLEYCSGGELFDRIE 97
Query: 163 KNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVE 222
+ + + L G+ YLH I HRD+K EN+LLD+ +KI+DFG+A V
Sbjct: 98 PDI--GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF 155
Query: 223 ASNPND--MTGETGTLGYMAPEVLNGNPYNRK-CDVYSFGICLWEIYCCDMPY 272
N + + GTL Y+APE+L ++ + DV+S GI L + ++P+
Sbjct: 156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 86/180 (47%), Gaps = 23/180 (12%)
Query: 145 CCVVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENML 204
+V+EY+ GG + ++L R + + A + YLHS +++RD+K EN+L
Sbjct: 117 LYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 174
Query: 205 LDKNRTVKIADFGVARVEASNPNDMTGET----GTLGYMAPEVLNGNPYNRKCDVYSFGI 260
+D+ +++ DFG A+ + G T GT Y+APE++ YN+ D ++ G+
Sbjct: 175 IDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 261 CLWEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
++E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 228 LIYEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 82/173 (47%), Gaps = 21/173 (12%)
Query: 103 QEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLI 162
+E+ + L+H NV KF G NI + +EY GG L +
Sbjct: 53 KEICINKMLNHENVVKFYGHRR----------------EGNIQYLFLEYCSGGELFDRIE 96
Query: 163 KNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVE 222
+ + + L G+ YLH I HRD+K EN+LLD+ +KI+DFG+A V
Sbjct: 97 PDI--GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF 154
Query: 223 ASNPND--MTGETGTLGYMAPEVLNGNPYNRK-CDVYSFGICLWEIYCCDMPY 272
N + + GTL Y+APE+L ++ + DV+S GI L + ++P+
Sbjct: 155 RYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 86/180 (47%), Gaps = 23/180 (12%)
Query: 145 CCVVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENML 204
+V+EY+ GG + ++L R + + A + YLHS +++RD+K EN+L
Sbjct: 137 LYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 194
Query: 205 LDKNRTVKIADFGVARVEASNPNDMTGET----GTLGYMAPEVLNGNPYNRKCDVYSFGI 260
+D+ +++ DFG A+ + G T GT Y+APE++ YN+ D ++ G+
Sbjct: 195 IDQQGYIQVTDFGFAK-------RVKGATWTLCGTPEYLAPEIILSKGYNKAVDWWALGV 247
Query: 261 CLWEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
++E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 248 LIYEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 301
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 86/180 (47%), Gaps = 23/180 (12%)
Query: 145 CCVVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENML 204
+V+EY+ GG + ++L R + + A + YLHS +++RD+K EN+L
Sbjct: 116 LYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 205 LDKNRTVKIADFGVARVEASNPNDMTGET----GTLGYMAPEVLNGNPYNRKCDVYSFGI 260
+D+ +++ DFG A+ + G T GT Y+APE++ YN+ D ++ G+
Sbjct: 174 IDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 261 CLWEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
++E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 227 LIYEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 86/180 (47%), Gaps = 23/180 (12%)
Query: 145 CCVVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENML 204
+V+EY+ GG + ++L R + + A + YLHS +++RD+K EN+L
Sbjct: 116 LYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 205 LDKNRTVKIADFGVARVEASNPNDMTGET----GTLGYMAPEVLNGNPYNRKCDVYSFGI 260
+D+ +++ DFG A+ + G T GT Y+APE++ YN+ D ++ G+
Sbjct: 174 IDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 261 CLWEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
++E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 227 LIYEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 86/180 (47%), Gaps = 23/180 (12%)
Query: 145 CCVVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENML 204
+V+EY+ GG + ++L R + + A + YLHS +++RD+K EN+L
Sbjct: 116 LYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 205 LDKNRTVKIADFGVARVEASNPNDMTGET----GTLGYMAPEVLNGNPYNRKCDVYSFGI 260
+D+ +++ DFG A+ + G T GT Y+APE++ YN+ D ++ G+
Sbjct: 174 IDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 261 CLWEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
++E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 227 LIYEMAAGYPPFFADEPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 86/180 (47%), Gaps = 23/180 (12%)
Query: 145 CCVVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENML 204
+V+EY+ GG + ++L R + + A + YLHS +++RD+K EN+L
Sbjct: 116 LYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 205 LDKNRTVKIADFGVARVEASNPNDMTGET----GTLGYMAPEVLNGNPYNRKCDVYSFGI 260
+D+ +++ DFG A+ + G T GT Y+APE++ YN+ D ++ G+
Sbjct: 174 IDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 261 CLWEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
++E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 227 LIYEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 104/232 (44%), Gaps = 35/232 (15%)
Query: 104 EVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIK 163
E+ + KL+HP + K I + + +I V+E + GG L ++
Sbjct: 204 EIEILKKLNHPCIIK-IKNFFDAEDYYI----------------VLELMEGGELFDKVVG 246
Query: 164 NRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLL---DKNRTVKIADFGVAR 220
N+R K A + + LA + YLH I+HRD+K EN+LL +++ +KI DFG ++
Sbjct: 247 NKRLKEATCKLYFYQMLLA--VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 304
Query: 221 VEASNPNDMTGETGTLGYMAPEVL---NGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSF 277
+ + M GT Y+APEVL YNR D +S G+ L + C YP S
Sbjct: 305 I-LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL---FICLSGYPPFSE 360
Query: 278 SEVTSAVVRQ------NLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
++ Q N PE+ +++K+ +P R +E +
Sbjct: 361 HRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEAL 412
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 86/180 (47%), Gaps = 23/180 (12%)
Query: 145 CCVVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENML 204
+V+EY+ GG + ++L R + + A + YLHS +++RD+K EN+L
Sbjct: 116 LYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 205 LDKNRTVKIADFGVARVEASNPNDMTGET----GTLGYMAPEVLNGNPYNRKCDVYSFGI 260
+D+ +++ DFG A+ + G T GT Y+APE++ YN+ D ++ G+
Sbjct: 174 IDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 261 CLWEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
++E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 227 LIYEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 82/173 (47%), Gaps = 21/173 (12%)
Query: 103 QEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLI 162
+E+ + L+H NV KF G NI + +EY GG L +
Sbjct: 53 KEIXINKMLNHENVVKFYGHRR----------------EGNIQYLFLEYCSGGELFDRIE 96
Query: 163 KNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVE 222
+ + + L G+ YLH I HRD+K EN+LLD+ +KI+DFG+A V
Sbjct: 97 PDI--GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF 154
Query: 223 ASNPND--MTGETGTLGYMAPEVLNGNPYNRK-CDVYSFGICLWEIYCCDMPY 272
N + + GTL Y+APE+L ++ + DV+S GI L + ++P+
Sbjct: 155 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 82/173 (47%), Gaps = 21/173 (12%)
Query: 103 QEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLI 162
+E+ + L+H NV KF G NI + +EY GG L +
Sbjct: 53 KEICINKMLNHENVVKFYGHRR----------------EGNIQYLFLEYCSGGELFDRIE 96
Query: 163 KNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVE 222
+ + + L G+ YLH I HRD+K EN+LLD+ +KI+DFG+A V
Sbjct: 97 PDI--GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF 154
Query: 223 ASNPND--MTGETGTLGYMAPEVLNGNPYNRK-CDVYSFGICLWEIYCCDMPY 272
N + + GTL Y+APE+L ++ + DV+S GI L + ++P+
Sbjct: 155 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 104/232 (44%), Gaps = 35/232 (15%)
Query: 104 EVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIK 163
E+ + KL+HP + K I + + +I V+E + GG L ++
Sbjct: 190 EIEILKKLNHPCIIK-IKNFFDAEDYYI----------------VLELMEGGELFDKVVG 232
Query: 164 NRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLL---DKNRTVKIADFGVAR 220
N+R K A + + LA + YLH I+HRD+K EN+LL +++ +KI DFG ++
Sbjct: 233 NKRLKEATCKLYFYQMLLA--VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 290
Query: 221 VEASNPNDMTGETGTLGYMAPEVL---NGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSF 277
+ + M GT Y+APEVL YNR D +S G+ L + C YP S
Sbjct: 291 I-LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL---FICLSGYPPFSE 346
Query: 278 SEVTSAVVRQ------NLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVV 323
++ Q N PE+ +++K+ +P R +E +
Sbjct: 347 HRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEAL 398
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 82/173 (47%), Gaps = 21/173 (12%)
Query: 103 QEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLI 162
+E+ + L+H NV KF G NI + +EY GG L +
Sbjct: 52 KEICINKMLNHENVVKFYGHRR----------------EGNIQYLFLEYCSGGELFDRIE 95
Query: 163 KNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVE 222
+ + + L G+ YLH I HRD+K EN+LLD+ +KI+DFG+A V
Sbjct: 96 PDI--GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF 153
Query: 223 ASNPND--MTGETGTLGYMAPEVLNGNPYNRK-CDVYSFGICLWEIYCCDMPY 272
N + + GTL Y+APE+L ++ + DV+S GI L + ++P+
Sbjct: 154 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 206
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 82/173 (47%), Gaps = 21/173 (12%)
Query: 103 QEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLI 162
+E+ + L+H NV KF G NI + +EY GG L +
Sbjct: 54 KEICINKMLNHENVVKFYGHRR----------------EGNIQYLFLEYCSGGELFDRIE 97
Query: 163 KNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVE 222
+ + + L G+ YLH I HRD+K EN+LLD+ +KI+DFG+A V
Sbjct: 98 PDI--GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF 155
Query: 223 ASNPND--MTGETGTLGYMAPEVLNGNPYNRK-CDVYSFGICLWEIYCCDMPY 272
N + + GTL Y+APE+L ++ + DV+S GI L + ++P+
Sbjct: 156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 112/268 (41%), Gaps = 32/268 (11%)
Query: 58 IARGTFGTVHRGLYD--GHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDH-P 114
+ RG F V + + G + A K L G AEI E+AV P
Sbjct: 37 LGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEIL-------HEIAVLELAKSCP 89
Query: 115 NVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVV 174
V +SE+ +++EY GG + + + ++ V
Sbjct: 90 RVINLHEVYENTSEI----------------ILILEYAAGGEIFSLCLPELAEMVSENDV 133
Query: 175 VQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNR---TVKIADFGVARVEASNPNDMTG 231
++L + G+ YLH IVH D+K +N+LL +KI DFG++R + + ++
Sbjct: 134 IRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSR-KIGHACELRE 192
Query: 232 ETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNL-R 290
GT Y+APE+LN +P D+++ GI + + P+ E + + N+
Sbjct: 193 IMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDY 252
Query: 291 PEIPRCCPSSLA-NVMKRCWDANPDKRP 317
E S LA + ++ NP+KRP
Sbjct: 253 SEETFSSVSQLATDFIQSLLVKNPEKRP 280
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 83/159 (52%), Gaps = 12/159 (7%)
Query: 147 VVVEYLPGGALKTY------LIKNRRRKLAFKVVVQLALDLARGLSYLHSQK-IVHRDVK 199
++ EY+ ++ + L KN + +V+ + + SY+H++K I HRDVK
Sbjct: 120 IIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVK 179
Query: 200 TENMLLDKNRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVL-NGNPYN-RKCDVYS 257
N+L+DKN VK++DFG + + G GT +M PE N + YN K D++S
Sbjct: 180 PSNILMDKNGRVKLSDFGESEYMVDKK--IKGSRGTYEFMPPEFFSNESSYNGAKVDIWS 237
Query: 258 FGICLWEIYCCDMPYP-DLSFSEVTSAVVRQNLRPEIPR 295
GICL+ ++ +P+ +S E+ + + +N+ + R
Sbjct: 238 LGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDR 276
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 82/173 (47%), Gaps = 21/173 (12%)
Query: 103 QEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLI 162
+E+ + L+H NV KF G NI + +EY GG L +
Sbjct: 53 KEICINKMLNHENVVKFYGHRR----------------EGNIQYLFLEYCSGGELFDRIE 96
Query: 163 KNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVE 222
+ + + L G+ YLH I HRD+K EN+LLD+ +KI+DFG+A V
Sbjct: 97 PDI--GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF 154
Query: 223 ASNPND--MTGETGTLGYMAPEVLNGNPYNRK-CDVYSFGICLWEIYCCDMPY 272
N + + GTL Y+APE+L ++ + DV+S GI L + ++P+
Sbjct: 155 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 82/173 (47%), Gaps = 21/173 (12%)
Query: 103 QEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLI 162
+E+ + L+H NV KF G NI + +EY GG L +
Sbjct: 53 KEICINKMLNHENVVKFYGHRR----------------EGNIQYLFLEYCSGGELFDRIE 96
Query: 163 KNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVE 222
+ + + L G+ YLH I HRD+K EN+LLD+ +KI+DFG+A V
Sbjct: 97 PDI--GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF 154
Query: 223 ASNPND--MTGETGTLGYMAPEVLNGNPYNRK-CDVYSFGICLWEIYCCDMPY 272
N + + GTL Y+APE+L ++ + DV+S GI L + ++P+
Sbjct: 155 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 82/173 (47%), Gaps = 21/173 (12%)
Query: 103 QEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLI 162
+E+ + L+H NV KF G NI + +EY GG L +
Sbjct: 53 KEICINKMLNHENVVKFYGHRR----------------EGNIQYLFLEYCSGGELFDRIE 96
Query: 163 KNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVE 222
+ + + L G+ YLH I HRD+K EN+LLD+ +KI+DFG+A V
Sbjct: 97 PDI--GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF 154
Query: 223 ASNPND--MTGETGTLGYMAPEVLNGNPYNRK-CDVYSFGICLWEIYCCDMPY 272
N + + GTL Y+APE+L ++ + DV+S GI L + ++P+
Sbjct: 155 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 65/124 (52%), Gaps = 11/124 (8%)
Query: 174 VVQLALDLAR----------GLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEA 223
V+Q+ LD R G+ +LHS I+HRD+K N+++ + T+KI DFG+AR A
Sbjct: 118 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-A 176
Query: 224 SNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA 283
M E T Y APEV+ G Y D++S G + E+ C + +P + + +
Sbjct: 177 GTSFMMEPEVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNK 236
Query: 284 VVRQ 287
V+ Q
Sbjct: 237 VIEQ 240
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 115/273 (42%), Gaps = 38/273 (13%)
Query: 30 PIGKASNFLKKQRQDWEIEPSKLVIKSVIARGTFGTVHRGLYDGHD--VAVKLLDWGEEG 87
P + ++ R+D+EI IK VI RG FG V + A+K+L+ E
Sbjct: 77 PFTQLVKEMQLHREDFEI------IK-VIGRGAFGEVAVVKMKNTERIYAMKILNKWEML 129
Query: 88 HRTEAEIAALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCV 147
R E + F +E V D +T A + L++
Sbjct: 130 KRAET------ACFREERDVLVNGDCQWITALHYAFQDENHLYL---------------- 167
Query: 148 VVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDK 207
V++Y GG L T L+ KL + ++ + +H VHRD+K +N+LLD
Sbjct: 168 VMDYYVGGDLLT-LLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDV 226
Query: 208 NRTVKIADFG-VARVEASNPNDMTGETGTLGYMAPEVLNG-----NPYNRKCDVYSFGIC 261
N +++ADFG ++ + GT Y++PE+L Y +CD +S G+C
Sbjct: 227 NGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVC 286
Query: 262 LWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIP 294
++E+ + P+ S E ++ R + P
Sbjct: 287 MYEMLYGETPFYAESLVETYGKIMNHEERFQFP 319
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 89/186 (47%), Gaps = 35/186 (18%)
Query: 145 CCVVVEYLPGGALKTYLIKNRR------RKLAFKVVVQLALDLARGLSYLHSQKIVHRDV 198
+V+EY+ GG + ++L + R R A ++V+ YLHS +++RD+
Sbjct: 137 LYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTF--------EYLHSLDLIYRDL 188
Query: 199 KTENMLLDKNRTVKIADFGVARVEASNPNDMTGET----GTLGYMAPEVLNGNPYNRKCD 254
K EN+L+D+ +++ DFG A+ + G T GT Y+APE++ YN+ D
Sbjct: 189 KPENLLIDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVD 241
Query: 255 VYSFGICLWEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWD 310
++ G+ ++E+ P+ P + ++ S VR P S L ++++
Sbjct: 242 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQ 295
Query: 311 ANPDKR 316
+ KR
Sbjct: 296 VDLTKR 301
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 82/173 (47%), Gaps = 21/173 (12%)
Query: 103 QEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLI 162
+E+ + L+H NV KF G NI + +EY GG L +
Sbjct: 53 KEICINKMLNHENVVKFYGHRR----------------EGNIQYLFLEYCSGGELFDRIE 96
Query: 163 KNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVE 222
+ + + L G+ YLH I HRD+K EN+LLD+ +KI+DFG+A V
Sbjct: 97 PDI--GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF 154
Query: 223 ASNPND--MTGETGTLGYMAPEVLNGNPYNRK-CDVYSFGICLWEIYCCDMPY 272
N + + GTL Y+APE+L ++ + DV+S GI L + ++P+
Sbjct: 155 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 132/303 (43%), Gaps = 48/303 (15%)
Query: 46 EIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSA----- 100
+I L+ + +GTF + +G V ++ D+G+ H TE + L A
Sbjct: 4 KIRNEDLIFNESLGQGTFTKIFKG------VRREVGDYGQL-HETEVLLKVLDKAHRNYS 56
Query: 101 --FTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALK 158
F + ++ KL H ++ G + E NI +V E++ G+L
Sbjct: 57 ESFFEAASMMSKLSHKHLVLNYGVCVCGDE--------------NI--LVQEFVKFGSLD 100
Query: 159 TYLIKNRR-RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRT------- 210
TYL KN+ + +K+ ++A LA + +L ++H +V +N+LL +
Sbjct: 101 TYLKKNKNCINILWKL--EVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPP 158
Query: 211 -VKIADFGVARVEASNPNDMTGETGTLGYMAPEVL-NGNPYNRKCDVYSFGICLWEIYCC 268
+K++D G++ P D+ E + ++ PE + N N D +SFG LWEI C
Sbjct: 159 FIKLSDPGISITVL--PKDILQER--IPWVPPECIENPKNLNLATDKWSFGTTLWEI--C 212
Query: 269 DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEA 328
LS + + R ++P + LAN++ C D PD RP ++ L +
Sbjct: 213 SGGDKPLSALDSQRKLQFYEDRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNS 272
Query: 329 IDT 331
+ T
Sbjct: 273 LFT 275
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 115/273 (42%), Gaps = 38/273 (13%)
Query: 30 PIGKASNFLKKQRQDWEIEPSKLVIKSVIARGTFGTVHRGLYDGHD--VAVKLLDWGEEG 87
P + ++ R+D+EI IK VI RG FG V + A+K+L+ E
Sbjct: 61 PFTQLVKEMQLHREDFEI------IK-VIGRGAFGEVAVVKMKNTERIYAMKILNKWEML 113
Query: 88 HRTEAEIAALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCV 147
R E + F +E V D +T A + L++
Sbjct: 114 KRAET------ACFREERDVLVNGDCQWITALHYAFQDENHLYL---------------- 151
Query: 148 VVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDK 207
V++Y GG L T L+ KL + ++ + +H VHRD+K +N+LLD
Sbjct: 152 VMDYYVGGDLLT-LLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDV 210
Query: 208 NRTVKIADFG-VARVEASNPNDMTGETGTLGYMAPEVLNG-----NPYNRKCDVYSFGIC 261
N +++ADFG ++ + GT Y++PE+L Y +CD +S G+C
Sbjct: 211 NGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVC 270
Query: 262 LWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIP 294
++E+ + P+ S E ++ R + P
Sbjct: 271 MYEMLYGETPFYAESLVETYGKIMNHEERFQFP 303
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 82/173 (47%), Gaps = 21/173 (12%)
Query: 103 QEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLI 162
+E+ + L+H NV KF G NI + +EY GG L +
Sbjct: 53 KEICINKMLNHENVVKFYGHRR----------------EGNIQYLFLEYCSGGELFDRIE 96
Query: 163 KNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVE 222
+ + + L G+ YLH I HRD+K EN+LLD+ +KI+DFG+A V
Sbjct: 97 PDI--GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF 154
Query: 223 ASNPND--MTGETGTLGYMAPEVLNGNPYNRK-CDVYSFGICLWEIYCCDMPY 272
N + + GTL Y+APE+L ++ + DV+S GI L + ++P+
Sbjct: 155 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 26/176 (14%)
Query: 104 EVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIK 163
E+ V +L HPN+ K +E+ + V+E + GG L +++
Sbjct: 98 EIGVLLRLSHPNIIKLKEIFETPTEISL----------------VLELVTGGELFDRIVE 141
Query: 164 N--RRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDK---NRTVKIADFGV 218
+ A V Q+ ++YLH IVHRD+K EN+L + +KIADFG+
Sbjct: 142 KGYYSERDAADAVKQIL----EAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGL 197
Query: 219 ARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPD 274
+++ + M GT GY APE+L G Y + D++S GI + + C P+ D
Sbjct: 198 SKI-VEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYD 252
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 82/173 (47%), Gaps = 21/173 (12%)
Query: 103 QEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLI 162
+E+ + L+H NV KF G NI + +EY GG L +
Sbjct: 54 KEICINKMLNHENVVKFYGHRR----------------EGNIQYLFLEYCSGGELFDRIE 97
Query: 163 KNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVE 222
+ + + L G+ YLH I HRD+K EN+LLD+ +KI+DFG+A V
Sbjct: 98 PDI--GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF 155
Query: 223 ASNPND--MTGETGTLGYMAPEVLNGNPYNRK-CDVYSFGICLWEIYCCDMPY 272
N + + GTL Y+APE+L ++ + DV+S GI L + ++P+
Sbjct: 156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+KL V L + RGL Y+HS I+HRD+K N+ ++++ +KI D+G+AR
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLAR---HTD 176
Query: 227 NDMTGETGTLGYMAPEV-LNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
++MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 89/186 (47%), Gaps = 35/186 (18%)
Query: 145 CCVVVEYLPGGALKTYLIKNRR------RKLAFKVVVQLALDLARGLSYLHSQKIVHRDV 198
+V+EY+ GG + ++L + R R A ++V+ YLHS +++RD+
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTF--------EYLHSLDLIYRDL 167
Query: 199 KTENMLLDKNRTVKIADFGVARVEASNPNDMTGET----GTLGYMAPEVLNGNPYNRKCD 254
K EN+L+D+ +++ DFG A+ + G T GT Y+APE++ YN+ D
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVD 220
Query: 255 VYSFGICLWEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWD 310
++ G+ ++E+ P+ P + ++ S VR P S L ++++
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQ 274
Query: 311 ANPDKR 316
+ KR
Sbjct: 275 VDLTKR 280
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 89/186 (47%), Gaps = 35/186 (18%)
Query: 145 CCVVVEYLPGGALKTYLIKNRR------RKLAFKVVVQLALDLARGLSYLHSQKIVHRDV 198
+V+EY+ GG + ++L + R R A ++V+ YLHS +++RD+
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTF--------EYLHSLDLIYRDL 167
Query: 199 KTENMLLDKNRTVKIADFGVARVEASNPNDMTGET----GTLGYMAPEVLNGNPYNRKCD 254
K EN+L+D+ +++ DFG A+ + G T GT Y+APE++ YN+ D
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVD 220
Query: 255 VYSFGICLWEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWD 310
++ G+ ++E+ P+ P + ++ S VR P S L ++++
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQ 274
Query: 311 ANPDKR 316
+ KR
Sbjct: 275 VDLTKR 280
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 86/180 (47%), Gaps = 23/180 (12%)
Query: 145 CCVVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENML 204
+V+EY+ GG + ++L R + + A + YLHS +++RD+K EN+L
Sbjct: 103 LYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 160
Query: 205 LDKNRTVKIADFGVARVEASNPNDMTGET----GTLGYMAPEVLNGNPYNRKCDVYSFGI 260
+D+ +++ DFG A+ + G T GT Y+APE++ YN+ D ++ G+
Sbjct: 161 IDEQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 213
Query: 261 CLWEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
++E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 214 LIYEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 267
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 89/186 (47%), Gaps = 35/186 (18%)
Query: 145 CCVVVEYLPGGALKTYLIKNRR------RKLAFKVVVQLALDLARGLSYLHSQKIVHRDV 198
+V+EY+ GG + ++L + R R A ++V+ YLHS +++RD+
Sbjct: 111 LYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTF--------EYLHSLDLIYRDL 162
Query: 199 KTENMLLDKNRTVKIADFGVARVEASNPNDMTGET----GTLGYMAPEVLNGNPYNRKCD 254
K EN+L+D+ +++ DFG A+ + G T GT Y+APE++ YN+ D
Sbjct: 163 KPENLLIDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVD 215
Query: 255 VYSFGICLWEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWD 310
++ G+ ++E+ P+ P + ++ S VR P S L ++++
Sbjct: 216 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQ 269
Query: 311 ANPDKR 316
+ KR
Sbjct: 270 VDLTKR 275
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 65/124 (52%), Gaps = 11/124 (8%)
Query: 174 VVQLALDLAR----------GLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEA 223
V+Q+ LD R G+ +LHS I+HRD+K N+++ + T+KI DFG+AR A
Sbjct: 123 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-A 181
Query: 224 SNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA 283
MT T Y APEV+ G Y D++S G + E+ C + +P + + +
Sbjct: 182 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNK 241
Query: 284 VVRQ 287
V+ Q
Sbjct: 242 VIEQ 245
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 82/173 (47%), Gaps = 21/173 (12%)
Query: 103 QEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLI 162
+E+ + L+H NV KF G NI + +EY GG L +
Sbjct: 54 KEICINAMLNHENVVKFYGHRR----------------EGNIQYLFLEYCSGGELFDRIE 97
Query: 163 KNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVE 222
+ + + L G+ YLH I HRD+K EN+LLD+ +KI+DFG+A V
Sbjct: 98 PDI--GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF 155
Query: 223 ASNPND--MTGETGTLGYMAPEVLNGNPYNRK-CDVYSFGICLWEIYCCDMPY 272
N + + GTL Y+APE+L ++ + DV+S GI L + ++P+
Sbjct: 156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 106/224 (47%), Gaps = 29/224 (12%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGL--YDGHDVAVKLLDWGEEGHRTEAEIAALRSAFT 102
WE+ P V + + G +G+V + G VA+K L ++EI A R+
Sbjct: 20 WEL-PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKL-----SRPFQSEIFAKRA--Y 71
Query: 103 QEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLI 162
+E+ + + H NV + +S L + + MP ++T L
Sbjct: 72 RELLLLKHMQHENVIGLLDVFTPASSLR-NFYDFYLVMP--------------FMQTDLQ 116
Query: 163 KNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVE 222
K K + + + L + +GL Y+HS +VHRD+K N+ ++++ +KI DFG+AR
Sbjct: 117 KIMGLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHA 176
Query: 223 ASNPNDMTGETGTLGYMAPEV-LNGNPYNRKCDVYSFGICLWEI 265
+ +MTG T Y APEV L+ YN+ D++S G + E+
Sbjct: 177 DA---EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEM 217
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 86/180 (47%), Gaps = 23/180 (12%)
Query: 145 CCVVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENML 204
+V+EY+ GG + ++L R + + A + YLHS +++RD+K EN++
Sbjct: 116 LYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLI 173
Query: 205 LDKNRTVKIADFGVARVEASNPNDMTGET----GTLGYMAPEVLNGNPYNRKCDVYSFGI 260
+D+ +++ DFG A+ + G T GT Y+APE++ YN+ D ++ G+
Sbjct: 174 IDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIIISKGYNKAVDWWALGV 226
Query: 261 CLWEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
++E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 227 LIYEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 89/184 (48%), Gaps = 35/184 (19%)
Query: 147 VVVEYLPGGALKTYLIKNRR------RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKT 200
+V+EY+ GG + ++L + R R A ++V+ YLHS +++RD+K
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTF--------EYLHSLDLIYRDLKP 169
Query: 201 ENMLLDKNRTVKIADFGVARVEASNPNDMTGET----GTLGYMAPEVLNGNPYNRKCDVY 256
EN+L+D+ +++ DFG A+ + G T GT Y+APE++ YN+ D +
Sbjct: 170 ENLLIDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 257 SFGICLWEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDAN 312
+ G+ ++E+ P+ P + ++ S VR P S L ++++ +
Sbjct: 223 ALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVD 276
Query: 313 PDKR 316
KR
Sbjct: 277 LTKR 280
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 65/124 (52%), Gaps = 11/124 (8%)
Query: 174 VVQLALDLAR----------GLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEA 223
V+Q+ LD R G+ +LHS I+HRD+K N+++ + T+KI DFG+AR A
Sbjct: 112 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-A 170
Query: 224 SNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA 283
MT T Y APEV+ G Y D++S G + E+ C + +P + + +
Sbjct: 171 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNK 230
Query: 284 VVRQ 287
V+ Q
Sbjct: 231 VIEQ 234
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 4/98 (4%)
Query: 177 LALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETGTL 236
L L RGL Y+HS I+HRD+K N+ ++++ ++I DFG+AR +MTG T
Sbjct: 128 LVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLAR---QADEEMTGYVATR 184
Query: 237 GYMAPEV-LNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 185 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFP 222
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 120/279 (43%), Gaps = 48/279 (17%)
Query: 58 IARGTFGTVHRGLYDGHD---VAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHP 114
I G FG V R + D VAVK ++ GE+ + +E+ L HP
Sbjct: 27 IGSGNFG-VARLMRDKQSNELVAVKYIERGEK----------IDENVKREIINHRSLRHP 75
Query: 115 NVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIK-NRRRKLAFKV 173
N+ +F + + L +V+EY GG L + R + +
Sbjct: 76 NIVRFKEVILTPTHL----------------AIVMEYASGGELFERICNAGRFSEDEARF 119
Query: 174 VVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRT--VKIADFGVAR--VEASNPNDM 229
Q L G+SY H+ ++ HRD+K EN LLD + +KI FG ++ V S P
Sbjct: 120 FFQ---QLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPK-- 174
Query: 230 TGETGTLGYMAPEVLNGNPYNRK-CDVYSFGICLWEIYCCDMPYPD----LSFSEVTSAV 284
GT Y+APEVL Y+ K DV+S G+ L+ + P+ D +F + +
Sbjct: 175 -STVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRI 233
Query: 285 VR-QNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 322
+ Q P+ P +++ R + A+P KR + E+
Sbjct: 234 LNVQYAIPDYVHISPEC-RHLISRIFVADPAKRISIPEI 271
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 131/303 (43%), Gaps = 48/303 (15%)
Query: 46 EIEPSKLVIKSVIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSA----- 100
+I L+ + +GTF + +G V ++ D+G+ H TE + L A
Sbjct: 4 KIRNEDLIFNESLGQGTFTKIFKG------VRREVGDYGQL-HETEVLLKVLDKAHRNYS 56
Query: 101 --FTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALK 158
F + ++ KL H ++ G E NI +V E++ G+L
Sbjct: 57 ESFFEAASMMSKLSHKHLVLNYGVCFCGDE--------------NI--LVQEFVKFGSLD 100
Query: 159 TYLIKNRR-RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRT------- 210
TYL KN+ + +K+ ++A LA + +L ++H +V +N+LL +
Sbjct: 101 TYLKKNKNCINILWKL--EVAKQLAWAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPP 158
Query: 211 -VKIADFGVARVEASNPNDMTGETGTLGYMAPEVL-NGNPYNRKCDVYSFGICLWEIYCC 268
+K++D G++ P D+ E + ++ PE + N N D +SFG LWEI C
Sbjct: 159 FIKLSDPGISITVL--PKDILQER--IPWVPPECIENPKNLNLATDKWSFGTTLWEI--C 212
Query: 269 DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEA 328
LS + + R ++P + LAN++ C D PD RP ++ L +
Sbjct: 213 SGGDKPLSALDSQRKLQFYEDRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNS 272
Query: 329 IDT 331
+ T
Sbjct: 273 LFT 275
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 86/180 (47%), Gaps = 23/180 (12%)
Query: 145 CCVVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENML 204
+V+EY+ GG + ++L R + + A + YLHS +++RD+K EN+L
Sbjct: 116 LYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 205 LDKNRTVKIADFGVARVEASNPNDMTGET----GTLGYMAPEVLNGNPYNRKCDVYSFGI 260
+D+ +++ DFG A+ + G T GT Y+APE++ YN+ D ++ G+
Sbjct: 174 IDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 261 CLWEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
++++ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 227 LIYQMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 4/108 (3%)
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+KL V L + RGL Y+HS I+HRD+K N+ ++++ +KI DFG+AR
Sbjct: 143 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 199
Query: 227 NDMTGETGTLGYMAPEV-LNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
++M G T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 200 DEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 247
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 83/170 (48%), Gaps = 23/170 (13%)
Query: 145 CCVVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENML 204
+V+EY+ GG + ++L R + + A + YLHS +++RD+K EN+L
Sbjct: 116 LYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 205 LDKNRTVKIADFGVARVEASNPNDMTGET----GTLGYMAPEVLNGNPYNRKCDVYSFGI 260
+D+ +++ DFG A+ + G T GT Y+APE++ YN+ D ++ G+
Sbjct: 174 IDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 261 CLWEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMK 306
++E+ P+ P + ++ S VR P S L ++++
Sbjct: 227 LIYEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLR 270
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 64/117 (54%), Gaps = 5/117 (4%)
Query: 162 IKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARV 221
I + + L + V L RGL Y+HS +++HRD+K N+L+++N +KI DFG+AR
Sbjct: 149 IIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARG 208
Query: 222 EASNPND----MTGETGTLGYMAPEV-LNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
++P + MT T Y APE+ L+ + Y + D++S G E+ +P
Sbjct: 209 LCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFP 265
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 86/179 (48%), Gaps = 23/179 (12%)
Query: 98 RSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGAL 157
R +EV++ ++ H NV LH EN +++E + GG L
Sbjct: 59 REEIEREVSILRQVLHHNVIT----------LHDVYEN------RTDVVLILELVSGGEL 102
Query: 158 KTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTEN-MLLDKNR---TVKI 213
+L ++ L+ + + G++YLH++KI H D+K EN MLLDKN +K+
Sbjct: 103 FDFL--AQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKL 160
Query: 214 ADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPY 272
DFG+A E + + GT ++APE++N P + D++S G+ + + P+
Sbjct: 161 IDFGLAH-EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 106/224 (47%), Gaps = 29/224 (12%)
Query: 45 WEIEPSKLVIKSVIARGTFGTVHRGL--YDGHDVAVKLLDWGEEGHRTEAEIAALRSAFT 102
WE+ P V + + G +G+V + G VA+K L ++EI A R+
Sbjct: 38 WEL-PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKL-----SRPFQSEIFAKRA--Y 89
Query: 103 QEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLI 162
+E+ + + H NV + +S L + + MP ++T L
Sbjct: 90 RELLLLKHMQHENVIGLLDVFTPASSLR-NFYDFYLVMP--------------FMQTDLQ 134
Query: 163 KNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVE 222
K + + + + L + +GL Y+HS +VHRD+K N+ ++++ +KI DFG+AR
Sbjct: 135 KIMGMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHA 194
Query: 223 ASNPNDMTGETGTLGYMAPEV-LNGNPYNRKCDVYSFGICLWEI 265
+ +MTG T Y APEV L+ YN+ D++S G + E+
Sbjct: 195 DA---EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEM 235
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 64/117 (54%), Gaps = 5/117 (4%)
Query: 162 IKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARV 221
I + + L + V L RGL Y+HS +++HRD+K N+L+++N +KI DFG+AR
Sbjct: 148 IIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARG 207
Query: 222 EASNPND----MTGETGTLGYMAPEV-LNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
++P + MT T Y APE+ L+ + Y + D++S G E+ +P
Sbjct: 208 LCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFP 264
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 4/108 (3%)
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+KL V L + RGL Y+HS I+HRD+K N+ ++++ +KI FG+AR
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLAR---HTD 176
Query: 227 NDMTGETGTLGYMAPEV-LNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
++MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 9/123 (7%)
Query: 148 VVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDK 207
+V +L G L L + + L+ + + RGL Y+HS ++HRD+K N+LL+
Sbjct: 123 LVTHLMGADLYKLL---KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT 179
Query: 208 NRTVKIADFGVARVEASNPNDMTG----ETGTLGYMAPEV-LNGNPYNRKCDVYSFGICL 262
+KI DFG+ARV A +D TG T Y APE+ LN Y + D++S G L
Sbjct: 180 TXDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL 238
Query: 263 WEI 265
E+
Sbjct: 239 AEM 241
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 85/180 (47%), Gaps = 23/180 (12%)
Query: 145 CCVVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENML 204
+V+EY+ GG + ++L R + + A + YLHS +++RD+K EN+L
Sbjct: 116 LYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 205 LDKNRTVKIADFGVARVEASNPNDMTGET----GTLGYMAPEVLNGNPYNRKCDVYSFGI 260
+D+ +++ DFG A+ + G T GT Y+AP ++ YN+ D ++ G+
Sbjct: 174 IDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPAIILSKGYNKAVDWWALGV 226
Query: 261 CLWEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
++E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 227 LIYEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 86/179 (48%), Gaps = 23/179 (12%)
Query: 98 RSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGAL 157
R +EV++ ++ H NV LH EN +++E + GG L
Sbjct: 59 REEIEREVSILRQVLHHNVIT----------LHDVYEN------RTDVVLILELVSGGEL 102
Query: 158 KTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTEN-MLLDKNR---TVKI 213
+L + + L+ + + G++YLH++KI H D+K EN MLLDKN +K+
Sbjct: 103 FDFLAQ--KESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKL 160
Query: 214 ADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPY 272
DFG+A E + + GT ++APE++N P + D++S G+ + + P+
Sbjct: 161 IDFGLAH-EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 74/134 (55%), Gaps = 21/134 (15%)
Query: 147 VVVEYLPGGALKTYLIKNRR-RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLL 205
+V E + GG++ +++ K R +L VVVQ D+A L +LH++ I HRD+K EN+L
Sbjct: 88 LVFEKMRGGSILSHIHKRRHFNELEASVVVQ---DVASALDFLHNKGIAHRDLKPENILC 144
Query: 206 D---KNRTVKIADFGVAR--------VEASNPNDMTGETGTLGYMAPEVL-----NGNPY 249
+ + VKI DFG+ S P +T G+ YMAPEV+ + Y
Sbjct: 145 EHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLT-PCGSAEYMAPEVVEAFSEEASIY 203
Query: 250 NRKCDVYSFGICLW 263
+++CD++S G+ L+
Sbjct: 204 DKRCDLWSLGVILY 217
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 86/179 (48%), Gaps = 23/179 (12%)
Query: 98 RSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGAL 157
R +EV++ ++ H NV LH EN +++E + GG L
Sbjct: 59 REEIEREVSILRQVLHHNVIT----------LHDVYEN------RTDVVLILELVSGGEL 102
Query: 158 KTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTEN-MLLDKNR---TVKI 213
+L + + L+ + + G++YLH++KI H D+K EN MLLDKN +K+
Sbjct: 103 FDFLAQ--KESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKL 160
Query: 214 ADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPY 272
DFG+A E + + GT ++APE++N P + D++S G+ + + P+
Sbjct: 161 IDFGLAH-EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 181 LARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTG----ETGTL 236
+ RGL Y+HS ++HRD+K N+LL+ +KI DFG+ARV A +D TG T
Sbjct: 133 ILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARV-ADPDHDHTGFLTEYVATR 191
Query: 237 GYMAPEV-LNGNPYNRKCDVYSFGICLWEI 265
Y APE+ LN Y + D++S G L E+
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEM 221
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 86/179 (48%), Gaps = 23/179 (12%)
Query: 98 RSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGAL 157
R +EV++ ++ H NV LH EN +++E + GG L
Sbjct: 59 REEIEREVSILRQVLHHNVIT----------LHDVYEN------RTDVVLILELVSGGEL 102
Query: 158 KTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTEN-MLLDKNR---TVKI 213
+L + + L+ + + G++YLH++KI H D+K EN MLLDKN +K+
Sbjct: 103 FDFLAQ--KESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKL 160
Query: 214 ADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPY 272
DFG+A E + + GT ++APE++N P + D++S G+ + + P+
Sbjct: 161 IDFGLAH-EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 86/179 (48%), Gaps = 23/179 (12%)
Query: 98 RSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGAL 157
R +EV++ ++ H NV LH EN +++E + GG L
Sbjct: 59 REEIEREVSILRQVLHHNVIT----------LHDVYEN------RTDVVLILELVSGGEL 102
Query: 158 KTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTEN-MLLDKNR---TVKI 213
+L + + L+ + + G++YLH++KI H D+K EN MLLDKN +K+
Sbjct: 103 FDFLAQ--KESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKL 160
Query: 214 ADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPY 272
DFG+A E + + GT ++APE++N P + D++S G+ + + P+
Sbjct: 161 IDFGLAH-EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 64/124 (51%), Gaps = 11/124 (8%)
Query: 174 VVQLALDLAR----------GLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEA 223
V+Q+ LD R G+ +LHS I+HRD+K N+++ + T+KI DFG+AR A
Sbjct: 118 VIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART-A 176
Query: 224 SNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA 283
MT T Y APEV+ G Y D++S G+ + E+ + +P + +
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNK 236
Query: 284 VVRQ 287
V+ Q
Sbjct: 237 VIEQ 240
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 71/147 (48%), Gaps = 7/147 (4%)
Query: 180 DLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETGTLGYM 239
D L++LHSQ +VH DVK N+ L K+ DFG+ VE + G YM
Sbjct: 165 DTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLL-VELGTAGAGEVQEGDPRYM 223
Query: 240 APEVLNGNPYNRKCDVYSFGICLWEIYC-CDMPYPDLSFSEVTSAVVRQNLRPEIPRCCP 298
APE+L G+ Y DV+S G+ + E+ C ++P+ + ++ L PE
Sbjct: 224 APELLQGS-YGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGY----LPPEFTAGLS 278
Query: 299 SSLANVMKRCWDANPDKRPEMDEVVSM 325
S L +V+ + +P R + ++++
Sbjct: 279 SELRSVLVMMLEPDPKLRATAEALLAL 305
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 64/124 (51%), Gaps = 11/124 (8%)
Query: 174 VVQLALDLAR----------GLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEA 223
V+Q+ LD R G+ +LHS I+HRD+K N+++ + T+KI DFG+AR A
Sbjct: 118 VIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART-A 176
Query: 224 SNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA 283
MT T Y APEV+ G Y D++S G+ + E+ + +P + +
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNK 236
Query: 284 VVRQ 287
V+ Q
Sbjct: 237 VIEQ 240
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 181 LARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTG----ETGTL 236
+ RGL Y+HS ++HRD+K N+LL+ +KI DFG+ARV A +D TG T
Sbjct: 135 ILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARV-ADPDHDHTGFLTEYVATR 193
Query: 237 GYMAPEV-LNGNPYNRKCDVYSFGICLWEI 265
Y APE+ LN Y + D++S G L E+
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEM 223
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 4/108 (3%)
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+KL V L + RGL Y+HS I+HRD+K N+ ++++ +KI D G+AR
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLAR---HTD 176
Query: 227 NDMTGETGTLGYMAPEV-LNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
++MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 181 LARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTG----ETGTL 236
+ RGL Y+HS ++HRD+K N+LL+ +KI DFG+ARV A +D TG T
Sbjct: 133 ILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARV-ADPDHDHTGFLTEYVATR 191
Query: 237 GYMAPEV-LNGNPYNRKCDVYSFGICLWEI 265
Y APE+ LN Y + D++S G L E+
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEM 221
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 101/219 (46%), Gaps = 39/219 (17%)
Query: 57 VIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAF------TQEVAVWHK 110
VI G+FG V++ KL D GE + A++ +E+ + K
Sbjct: 27 VIGNGSFGVVYQA---------KLCDSGE--------LVAIKKVLQGKAFKNRELQIMRK 69
Query: 111 LDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLA 170
LDH N+ + S E + +V + +V++Y+P + +R ++
Sbjct: 70 LDHCNIVRLRYFFYSSGE-----KKDEVYL-----NLVLDYVPATVYRVARHYSRAKQTL 119
Query: 171 FKVVVQLAL-DLARGLSYLHSQKIVHRDVKTENMLLDKNRTV-KIADFGVAR-VEASNPN 227
+ V+L + L R L+Y+HS I HRD+K +N+LLD + V K+ DFG A+ + PN
Sbjct: 120 PVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN 179
Query: 228 DMTGETGTLGYMAPEVLNG-NPYNRKCDVYSFGICLWEI 265
+ Y APE++ G Y DV+S G L E+
Sbjct: 180 --VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 216
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 181 LARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTG----ETGTL 236
+ RGL Y+HS ++HRD+K N+LL+ +KI DFG+ARV A +D TG T
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARV-ADPDHDHTGFLTEYVATR 195
Query: 237 GYMAPEV-LNGNPYNRKCDVYSFGICLWEI 265
Y APE+ LN Y + D++S G L E+
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEM 225
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 181 LARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTG----ETGTL 236
+ RGL Y+HS ++HRD+K N+LL+ +KI DFG+ARV A +D TG T
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARV-ADPDHDHTGFLTEYVATR 195
Query: 237 GYMAPEV-LNGNPYNRKCDVYSFGICLWEI 265
Y APE+ LN Y + D++S G L E+
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEM 225
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 181 LARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTG----ETGTL 236
+ RGL Y+HS ++HRD+K N+LL+ +KI DFG+ARV A +D TG T
Sbjct: 133 ILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARV-ADPDHDHTGFLTEYVATR 191
Query: 237 GYMAPEV-LNGNPYNRKCDVYSFGICLWEI 265
Y APE+ LN Y + D++S G L E+
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEM 221
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 104/239 (43%), Gaps = 46/239 (19%)
Query: 58 IARGTFGTVHRGL-YDGHD-VAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPN 115
I GT+GTV + + H+ VA+K + R + + + S+ +E+ + +L H N
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRV-------RLDDDDEGVPSSALREICLLKELKHKN 62
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVV 175
+ + +L + E C LK Y + L ++V
Sbjct: 63 IVRLHDVLHSDKKLTLVFE---------FC--------DQDLKKYF-DSCNGDLDPEIVK 104
Query: 176 QLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETGT 235
L +GL + HS+ ++HRD+K +N+L+++N +K+ADFG+AR + E T
Sbjct: 105 SFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVT 164
Query: 236 LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIP 294
L Y P+VL G +YS I +W C F+E+ +A RP P
Sbjct: 165 LWYRPPDVLFG------AKLYSTSIDMWSAGCI--------FAELANAA-----RPLFP 204
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 77/145 (53%), Gaps = 9/145 (6%)
Query: 147 VVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENML-L 205
VV E + GG L ++ R++ + + + + + + YLH+Q +VHRD+K N+L +
Sbjct: 93 VVTELMKGGELLDKIL--RQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYV 150
Query: 206 DKN---RTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICL 262
D++ +++I DFG A+ + + T ++APEVL Y+ CD++S G+ L
Sbjct: 151 DESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLL 210
Query: 263 WEIYCCDMPY---PDLSFSEVTSAV 284
+ + P+ PD + E+ + +
Sbjct: 211 YTMLTGYTPFANGPDDTPEEILARI 235
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 4/108 (3%)
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+KL V L + RGL Y+HS I+HRD+K N+ ++++ +KI D G+AR
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLAR---HTD 176
Query: 227 NDMTGETGTLGYMAPEV-LNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
++MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 4/108 (3%)
Query: 167 RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNP 226
+KL V L + RGL Y+HS I+HRD+K N+ ++++ +KI D G+AR
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLAR---HTD 176
Query: 227 NDMTGETGTLGYMAPEV-LNGNPYNRKCDVYSFGICLWEIYCCDMPYP 273
++MTG T Y APE+ LN YN+ D++S G + E+ +P
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 98/222 (44%), Gaps = 32/222 (14%)
Query: 57 VIARGTFGTV--HRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHP 114
++ G+F TV R L + A+K+L E+ H + T+E V +LDHP
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKIL---EKRHIIKENKVPY---VTRERDVMSRLDHP 92
Query: 115 NVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVV 174
K +L+ ++ N C L+K R+ +F
Sbjct: 93 FFVKLYFTFQDDEKLYFG-----LSYAKNGC---------------LLKYIRKIGSFDET 132
Query: 175 VQ--LALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGE 232
++ L YLH + I+HRD+K EN+LL+++ ++I DFG A+V +
Sbjct: 133 CTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 192
Query: 233 T--GTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPY 272
+ GT Y++PE+L ++ D+++ G ++++ P+
Sbjct: 193 SFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 64/124 (51%), Gaps = 11/124 (8%)
Query: 174 VVQLALDLAR----------GLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEA 223
V+Q+ LD R G+ +LHS I+HRD+K N+++ + T+KI DFG+AR A
Sbjct: 118 VIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART-A 176
Query: 224 SNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA 283
MT T Y APEV+ G Y D++S G + E+ + +P + + +
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 236
Query: 284 VVRQ 287
V+ Q
Sbjct: 237 VIEQ 240
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 64/124 (51%), Gaps = 11/124 (8%)
Query: 174 VVQLALDLAR----------GLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEA 223
V+Q+ LD R G+ +LHS I+HRD+K N+++ + T+KI DFG+AR A
Sbjct: 118 VIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART-A 176
Query: 224 SNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA 283
MT T Y APEV+ G Y D++S G + E+ + +P + + +
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 236
Query: 284 VVRQ 287
V+ Q
Sbjct: 237 VIEQ 240
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 97/222 (43%), Gaps = 30/222 (13%)
Query: 58 IARGTFGTVHRGLY--DGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPN 115
+ +G F V R + G + A K+++ + R ++ +E + L HPN
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKL-------EREARICRLLKHPN 64
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVV 175
+ + + ++ H +V + + GG L ++ R +
Sbjct: 65 IVR-LHDSISEEGFHY---------------LVFDLVTGGELFEDIVA--REYYSEADAS 106
Query: 176 QLALDLARGLSYLHSQKIVHRDVKTENMLL---DKNRTVKIADFGVARVEASNPNDMTGE 232
+ +++ H IVHRD+K EN+LL K VK+ADFG+A + G
Sbjct: 107 HCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGF 166
Query: 233 TGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPD 274
GT GY++PEVL +PY + D+++ G+ L+ + P+ D
Sbjct: 167 AGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWD 208
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 101/219 (46%), Gaps = 39/219 (17%)
Query: 57 VIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAF------TQEVAVWHK 110
VI G+FG V++ KL D GE + A++ +E+ + K
Sbjct: 27 VIGNGSFGVVYQA---------KLCDSGE--------LVAIKKVLQDKRFKNRELQIMRK 69
Query: 111 LDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLA 170
LDH N+ + S E + +V + +V++Y+P + +R ++
Sbjct: 70 LDHCNIVRLRYFFYSSGE-----KKDEVYL-----NLVLDYVPETVYRVARHYSRAKQTL 119
Query: 171 FKVVVQLAL-DLARGLSYLHSQKIVHRDVKTENMLLDKNRTV-KIADFGVAR-VEASNPN 227
+ V+L + L R L+Y+HS I HRD+K +N+LLD + V K+ DFG A+ + PN
Sbjct: 120 PVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN 179
Query: 228 DMTGETGTLGYMAPEVLNG-NPYNRKCDVYSFGICLWEI 265
+ Y APE++ G Y DV+S G L E+
Sbjct: 180 --VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 216
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 101/219 (46%), Gaps = 39/219 (17%)
Query: 57 VIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAF------TQEVAVWHK 110
VI G+FG V++ KL D GE + A++ +E+ + K
Sbjct: 27 VIGNGSFGVVYQA---------KLCDSGE--------LVAIKKVLQDKRFKNRELQIMRK 69
Query: 111 LDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLA 170
LDH N+ + S E + +V + +V++Y+P + +R ++
Sbjct: 70 LDHCNIVRLRYFFYSSGE-----KKDEVYL-----NLVLDYVPETVYRVARHYSRAKQTL 119
Query: 171 FKVVVQLAL-DLARGLSYLHSQKIVHRDVKTENMLLDKNRTV-KIADFGVAR-VEASNPN 227
+ V+L + L R L+Y+HS I HRD+K +N+LLD + V K+ DFG A+ + PN
Sbjct: 120 PVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN 179
Query: 228 DMTGETGTLGYMAPEVLNG-NPYNRKCDVYSFGICLWEI 265
+ Y APE++ G Y DV+S G L E+
Sbjct: 180 --VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 216
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 101/219 (46%), Gaps = 39/219 (17%)
Query: 57 VIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAF------TQEVAVWHK 110
VI G+FG V++ KL D GE + A++ +E+ + K
Sbjct: 28 VIGNGSFGVVYQA---------KLCDSGE--------LVAIKKVLQDKRFKNRELQIMRK 70
Query: 111 LDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLA 170
LDH N+ + S E + +V + +V++Y+P + +R ++
Sbjct: 71 LDHCNIVRLRYFFYSSGE-----KKDEVYL-----NLVLDYVPETVYRVARHYSRAKQTL 120
Query: 171 FKVVVQLAL-DLARGLSYLHSQKIVHRDVKTENMLLDKNRTV-KIADFGVAR-VEASNPN 227
+ V+L + L R L+Y+HS I HRD+K +N+LLD + V K+ DFG A+ + PN
Sbjct: 121 PVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN 180
Query: 228 DMTGETGTLGYMAPEVLNG-NPYNRKCDVYSFGICLWEI 265
+ Y APE++ G Y DV+S G L E+
Sbjct: 181 --VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 217
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 64/124 (51%), Gaps = 11/124 (8%)
Query: 174 VVQLALDLAR----------GLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEA 223
V+Q+ LD R G+ +LHS I+HRD+K N+++ + T+KI DFG+AR A
Sbjct: 118 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART-A 176
Query: 224 SNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA 283
MT T Y APEV+ G Y D++S G + E+ + +P + + +
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 236
Query: 284 VVRQ 287
V+ Q
Sbjct: 237 VIEQ 240
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 101/219 (46%), Gaps = 39/219 (17%)
Query: 57 VIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAF------TQEVAVWHK 110
VI G+FG V++ KL D GE + A++ +E+ + K
Sbjct: 61 VIGNGSFGVVYQA---------KLCDSGE--------LVAIKKVLQDKRFKNRELQIMRK 103
Query: 111 LDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLA 170
LDH N+ + S E + +V + +V++Y+P + +R ++
Sbjct: 104 LDHCNIVRLRYFFYSSGE-----KKDEVYL-----NLVLDYVPETVYRVARHYSRAKQTL 153
Query: 171 FKVVVQLAL-DLARGLSYLHSQKIVHRDVKTENMLLDKNRTV-KIADFGVAR-VEASNPN 227
+ V+L + L R L+Y+HS I HRD+K +N+LLD + V K+ DFG A+ + PN
Sbjct: 154 PVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN 213
Query: 228 DMTGETGTLGYMAPEVLNG-NPYNRKCDVYSFGICLWEI 265
+ Y APE++ G Y DV+S G L E+
Sbjct: 214 --VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 250
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 64/124 (51%), Gaps = 11/124 (8%)
Query: 174 VVQLALDLAR----------GLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEA 223
V+Q+ LD R G+ +LHS I+HRD+K N+++ + T+KI DFG+AR A
Sbjct: 118 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART-A 176
Query: 224 SNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA 283
MT T Y APEV+ G Y D++S G + E+ + +P + + +
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 236
Query: 284 VVRQ 287
V+ Q
Sbjct: 237 VIEQ 240
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 101/219 (46%), Gaps = 39/219 (17%)
Query: 57 VIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAF------TQEVAVWHK 110
VI G+FG V++ KL D GE + A++ +E+ + K
Sbjct: 46 VIGNGSFGVVYQA---------KLCDSGE--------LVAIKKVLQDKRFKNRELQIMRK 88
Query: 111 LDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLA 170
LDH N+ + S E + +V + +V++Y+P + +R ++
Sbjct: 89 LDHCNIVRLRYFFYSSGE-----KKDEVYL-----NLVLDYVPETVYRVARHYSRAKQTL 138
Query: 171 FKVVVQLAL-DLARGLSYLHSQKIVHRDVKTENMLLDKNRTV-KIADFGVAR-VEASNPN 227
+ V+L + L R L+Y+HS I HRD+K +N+LLD + V K+ DFG A+ + PN
Sbjct: 139 PVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN 198
Query: 228 DMTGETGTLGYMAPEVLNG-NPYNRKCDVYSFGICLWEI 265
+ Y APE++ G Y DV+S G L E+
Sbjct: 199 --VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 235
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 101/219 (46%), Gaps = 39/219 (17%)
Query: 57 VIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAF------TQEVAVWHK 110
VI G+FG V++ KL D GE + A++ +E+ + K
Sbjct: 35 VIGNGSFGVVYQA---------KLCDSGE--------LVAIKKVLQDKRFKNRELQIMRK 77
Query: 111 LDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLA 170
LDH N+ + S E + +V + +V++Y+P + +R ++
Sbjct: 78 LDHCNIVRLRYFFYSSGE-----KKDEVYL-----NLVLDYVPETVYRVARHYSRAKQTL 127
Query: 171 FKVVVQLAL-DLARGLSYLHSQKIVHRDVKTENMLLDKNRTV-KIADFGVAR-VEASNPN 227
+ V+L + L R L+Y+HS I HRD+K +N+LLD + V K+ DFG A+ + PN
Sbjct: 128 PVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN 187
Query: 228 DMTGETGTLGYMAPEVLNG-NPYNRKCDVYSFGICLWEI 265
+ Y APE++ G Y DV+S G L E+
Sbjct: 188 --VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 224
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 97/222 (43%), Gaps = 30/222 (13%)
Query: 58 IARGTFGTVHRGLY--DGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPN 115
+ +G F V R + G + A K+++ + R ++ +E + L HPN
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKL-------EREARICRLLKHPN 64
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVV 175
+ + + ++ H +V + + GG L ++ R +
Sbjct: 65 IVR-LHDSISEEGFHY---------------LVFDLVTGGELFEDIVA--REYYSEADAS 106
Query: 176 QLALDLARGLSYLHSQKIVHRDVKTENMLL---DKNRTVKIADFGVARVEASNPNDMTGE 232
+ +++ H IVHRD+K EN+LL K VK+ADFG+A + G
Sbjct: 107 HCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGF 166
Query: 233 TGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPD 274
GT GY++PEVL +PY + D+++ G+ L+ + P+ D
Sbjct: 167 AGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWD 208
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 64/124 (51%), Gaps = 11/124 (8%)
Query: 174 VVQLALDLAR----------GLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEA 223
V+Q+ LD R G+ +LHS I+HRD+K N+++ + T+KI DFG+AR A
Sbjct: 111 VIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART-A 169
Query: 224 SNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA 283
MT T Y APEV+ G Y D++S G + E+ + +P + + +
Sbjct: 170 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 229
Query: 284 VVRQ 287
V+ Q
Sbjct: 230 VIEQ 233
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 85/178 (47%), Gaps = 23/178 (12%)
Query: 147 VVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLD 206
+V+EY+ GG + ++L R + + A + YLHS +++RD+K EN+L+D
Sbjct: 118 MVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 207 KNRTVKIADFGVARVEASNPNDMTGET----GTLGYMAPEVLNGNPYNRKCDVYSFGICL 262
+ +++ DFG A+ + G T GT +APE++ YN+ D ++ G+ +
Sbjct: 176 QQGYIQVTDFGFAK-------RVKGRTWXLCGTPEALAPEIILSKGYNKAVDWWALGVLI 228
Query: 263 WEIYCCDMPY----PDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKR 316
+E+ P+ P + ++ S VR P S L ++++ + KR
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVR------FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 101/219 (46%), Gaps = 39/219 (17%)
Query: 57 VIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAF------TQEVAVWHK 110
VI G+FG V++ KL D GE + A++ +E+ + K
Sbjct: 39 VIGNGSFGVVYQA---------KLCDSGE--------LVAIKKVLQDKRFKNRELQIMRK 81
Query: 111 LDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLA 170
LDH N+ + S E + +V + +V++Y+P + +R ++
Sbjct: 82 LDHCNIVRLRYFFYSSGE-----KKDEVYL-----NLVLDYVPETVYRVARHYSRAKQTL 131
Query: 171 FKVVVQLAL-DLARGLSYLHSQKIVHRDVKTENMLLDKNRTV-KIADFGVAR-VEASNPN 227
+ V+L + L R L+Y+HS I HRD+K +N+LLD + V K+ DFG A+ + PN
Sbjct: 132 PVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN 191
Query: 228 DMTGETGTLGYMAPEVLNG-NPYNRKCDVYSFGICLWEI 265
+ Y APE++ G Y DV+S G L E+
Sbjct: 192 --VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 228
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 101/219 (46%), Gaps = 39/219 (17%)
Query: 57 VIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAF------TQEVAVWHK 110
VI G+FG V++ KL D GE + A++ +E+ + K
Sbjct: 27 VIGNGSFGVVYQA---------KLCDSGE--------LVAIKKVLQDKRFKNRELQIMRK 69
Query: 111 LDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLA 170
LDH N+ + S E + +V + +V++Y+P + +R ++
Sbjct: 70 LDHCNIVRLRYFFYSSGE-----KKDEVYL-----NLVLDYVPETVYRVARHYSRAKQTL 119
Query: 171 FKVVVQLAL-DLARGLSYLHSQKIVHRDVKTENMLLDKNRTV-KIADFGVAR-VEASNPN 227
+ V+L + L R L+Y+HS I HRD+K +N+LLD + V K+ DFG A+ + PN
Sbjct: 120 PVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN 179
Query: 228 DMTGETGTLGYMAPEVLNG-NPYNRKCDVYSFGICLWEI 265
+ Y APE++ G Y DV+S G L E+
Sbjct: 180 --VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 216
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 101/219 (46%), Gaps = 39/219 (17%)
Query: 57 VIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAF------TQEVAVWHK 110
VI G+FG V++ KL D GE + A++ +E+ + K
Sbjct: 39 VIGNGSFGVVYQA---------KLCDSGE--------LVAIKKVLQDKRFKNRELQIMRK 81
Query: 111 LDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLA 170
LDH N+ + S E + +V + +V++Y+P + +R ++
Sbjct: 82 LDHCNIVRLRYFFYSSGE-----KKDEVYL-----NLVLDYVPETVYRVARHYSRAKQTL 131
Query: 171 FKVVVQLAL-DLARGLSYLHSQKIVHRDVKTENMLLDKNRTV-KIADFGVAR-VEASNPN 227
+ V+L + L R L+Y+HS I HRD+K +N+LLD + V K+ DFG A+ + PN
Sbjct: 132 PVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN 191
Query: 228 DMTGETGTLGYMAPEVLNG-NPYNRKCDVYSFGICLWEI 265
+ Y APE++ G Y DV+S G L E+
Sbjct: 192 --VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 228
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 101/219 (46%), Gaps = 39/219 (17%)
Query: 57 VIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAF------TQEVAVWHK 110
VI G+FG V++ KL D GE + A++ +E+ + K
Sbjct: 31 VIGNGSFGVVYQA---------KLCDSGE--------LVAIKKVLQDKRFKNRELQIMRK 73
Query: 111 LDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLA 170
LDH N+ + S E + +V + +V++Y+P + +R ++
Sbjct: 74 LDHCNIVRLRYFFYSSGE-----KKDEVYL-----NLVLDYVPETVYRVARHYSRAKQTL 123
Query: 171 FKVVVQLAL-DLARGLSYLHSQKIVHRDVKTENMLLDKNRTV-KIADFGVAR-VEASNPN 227
+ V+L + L R L+Y+HS I HRD+K +N+LLD + V K+ DFG A+ + PN
Sbjct: 124 PVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN 183
Query: 228 DMTGETGTLGYMAPEVLNG-NPYNRKCDVYSFGICLWEI 265
+ Y APE++ G Y DV+S G L E+
Sbjct: 184 --VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 220
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 64/124 (51%), Gaps = 11/124 (8%)
Query: 174 VVQLALDLAR----------GLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEA 223
V+Q+ LD R G+ +LHS I+HRD+K N+++ + T+KI DFG+AR A
Sbjct: 118 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-A 176
Query: 224 SNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA 283
MT E T Y APEV+ G Y D++S G + E+ + +P + +
Sbjct: 177 GTSFMMTPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK 236
Query: 284 VVRQ 287
V+ Q
Sbjct: 237 VIEQ 240
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 96/230 (41%), Gaps = 32/230 (13%)
Query: 49 PSKLVIKSVIARGTFGTV--HRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVA 106
P ++ G+F TV R L + A+K+L E+ H + T+E
Sbjct: 9 PEDFKFGKILGEGSFSTVVLARELATSREYAIKIL---EKRHIIKENKVPY---VTRERD 62
Query: 107 VWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRR 166
V +LDHP K +L+ + Y G L Y+ R
Sbjct: 63 VMSRLDHPFFVKLYFTFQDDEKLYFG----------------LSYAKNGELLKYI----R 102
Query: 167 RKLAFKVVVQ--LALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEAS 224
+ +F ++ L YLH + I+HRD+K EN+LL+++ ++I DFG A+V +
Sbjct: 103 KIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSP 162
Query: 225 NPNDMTGE--TGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPY 272
GT Y++PE+L + D+++ G ++++ P+
Sbjct: 163 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 212
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 181 LARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTG----ETGTL 236
+ RGL Y+HS ++HRD+K N+LL+ +KI DFG+ARV A +D TG T
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLXEXVATR 195
Query: 237 GYMAPEV-LNGNPYNRKCDVYSFGICLWEI 265
Y APE+ LN Y + D++S G L E+
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEM 225
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 101/219 (46%), Gaps = 39/219 (17%)
Query: 57 VIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAF------TQEVAVWHK 110
VI G+FG V++ KL D GE + A++ +E+ + K
Sbjct: 40 VIGNGSFGVVYQA---------KLCDSGE--------LVAIKKVLQDKRFKNRELQIMRK 82
Query: 111 LDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLA 170
LDH N+ + S E + +V + +V++Y+P + +R ++
Sbjct: 83 LDHCNIVRLRYFFYSSGE-----KKDEVYL-----NLVLDYVPETVYRVARHYSRAKQTL 132
Query: 171 FKVVVQLAL-DLARGLSYLHSQKIVHRDVKTENMLLDKNRTV-KIADFGVAR-VEASNPN 227
+ V+L + L R L+Y+HS I HRD+K +N+LLD + V K+ DFG A+ + PN
Sbjct: 133 PVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN 192
Query: 228 DMTGETGTLGYMAPEVLNG-NPYNRKCDVYSFGICLWEI 265
+ Y APE++ G Y DV+S G L E+
Sbjct: 193 --VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 181 LARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTG----ETGTL 236
+ RGL Y+HS ++HRD+K N+LL+ +KI DFG+ARV A +D TG T
Sbjct: 138 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLXEXVATR 196
Query: 237 GYMAPEV-LNGNPYNRKCDVYSFGICLWEI 265
Y APE+ LN Y + D++S G L E+
Sbjct: 197 WYRAPEIMLNSKGYTKSIDIWSVGCILAEM 226
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 96/230 (41%), Gaps = 32/230 (13%)
Query: 49 PSKLVIKSVIARGTFGTV--HRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVA 106
P ++ G+F TV R L + A+K+L E+ H + T+E
Sbjct: 8 PEDFKFGKILGEGSFSTVVLARELATSREYAIKIL---EKRHIIKENKVPY---VTRERD 61
Query: 107 VWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRR 166
V +LDHP K +L+ + Y G L Y+ R
Sbjct: 62 VMSRLDHPFFVKLYFTFQDDEKLYFG----------------LSYAKNGELLKYI----R 101
Query: 167 RKLAFKVVVQ--LALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEAS 224
+ +F ++ L YLH + I+HRD+K EN+LL+++ ++I DFG A+V +
Sbjct: 102 KIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSP 161
Query: 225 NPNDMTGE--TGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPY 272
GT Y++PE+L + D+++ G ++++ P+
Sbjct: 162 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 211
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 101/219 (46%), Gaps = 39/219 (17%)
Query: 57 VIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAF------TQEVAVWHK 110
VI G+FG V++ KL D GE + A++ +E+ + K
Sbjct: 61 VIGNGSFGVVYQA---------KLCDSGE--------LVAIKKVLQDKRFKNRELQIMRK 103
Query: 111 LDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLA 170
LDH N+ + S E + +V + +V++Y+P + +R ++
Sbjct: 104 LDHCNIVRLRYFFYSSGE-----KKDEVYL-----NLVLDYVPETVYRVARHYSRAKQTL 153
Query: 171 FKVVVQLAL-DLARGLSYLHSQKIVHRDVKTENMLLDKNRTV-KIADFGVAR-VEASNPN 227
+ V+L + L R L+Y+HS I HRD+K +N+LLD + V K+ DFG A+ + PN
Sbjct: 154 PVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN 213
Query: 228 DMTGETGTLGYMAPEVLNG-NPYNRKCDVYSFGICLWEI 265
+ Y APE++ G Y DV+S G L E+
Sbjct: 214 --VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 250
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 101/219 (46%), Gaps = 39/219 (17%)
Query: 57 VIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAF------TQEVAVWHK 110
VI G+FG V++ KL D GE + A++ +E+ + K
Sbjct: 27 VIGNGSFGVVYQA---------KLCDSGE--------LVAIKKVLQGKAFKNRELQIMRK 69
Query: 111 LDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLA 170
LDH N+ + S E + +V + +V++Y+P + +R ++
Sbjct: 70 LDHCNIVRLRYFFYSSGE-----KKDEVYL-----NLVLDYVPETVYRVARHYSRAKQTL 119
Query: 171 FKVVVQLAL-DLARGLSYLHSQKIVHRDVKTENMLLDKNRTV-KIADFGVAR-VEASNPN 227
+ V+L + L R L+Y+HS I HRD+K +N+LLD + V K+ DFG A+ + PN
Sbjct: 120 PVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN 179
Query: 228 DMTGETGTLGYMAPEVLNG-NPYNRKCDVYSFGICLWEI 265
+ Y APE++ G Y DV+S G L E+
Sbjct: 180 --VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 216
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 72/146 (49%), Gaps = 6/146 (4%)
Query: 181 LARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGET--GTLGY 238
L GL YLHSQ IVH+D+K N+LL T+KI+ GVA D T T G+ +
Sbjct: 118 LIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAF 177
Query: 239 MAPEVLNG--NPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRC 296
PE+ NG K D++S G+ L+ I P+ + ++ + + + IP
Sbjct: 178 QPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSY--AIPGD 235
Query: 297 CPSSLANVMKRCWDANPDKRPEMDEV 322
C L++++K + P KR + ++
Sbjct: 236 CGPPLSDLLKGMLEYEPAKRFSIRQI 261
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 125/297 (42%), Gaps = 49/297 (16%)
Query: 57 VIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAF------TQEVAVWHK 110
VI G+FG V++ KL D GE + A++ +E+ + K
Sbjct: 27 VIGNGSFGVVYQA---------KLCDSGE--------LVAIKKVLQGKAFKNRELQIMRK 69
Query: 111 LDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLA 170
LDH N+ + S E + +V + +V++Y+P + +R ++
Sbjct: 70 LDHCNIVRLRYFFYSSGE-----KKDEVYL-----NLVLDYVPETVYRVARHYSRAKQTL 119
Query: 171 FKVVVQLAL-DLARGLSYLHSQKIVHRDVKTENMLLDKNRTV-KIADFGVAR-VEASNPN 227
+ V+L + L R L+Y+HS I HRD+K +N+LLD + V K+ DFG A+ + PN
Sbjct: 120 PVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN 179
Query: 228 DMTGETGTLGYMAPEVLNG-NPYNRKCDVYSFGICLWEIYCCDMPYPD-------LSFSE 279
+ Y APE++ G Y DV+S G L E+ +P + +
Sbjct: 180 --VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 237
Query: 280 VTSAVVRQNLRPEIPRCCPSSLANVMKRCWDA--NPDKRPEMDEVVS-MLEAIDTSK 333
V R+ +R P + + W P PE + S +LE T++
Sbjct: 238 VLGTPTREQIREMNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTAR 294
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 58/105 (55%), Gaps = 4/105 (3%)
Query: 165 RRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARV--- 221
+ ++L+ + + RGL Y+HS ++HRD+K N+L++ +KI DFG+AR+
Sbjct: 137 KSQQLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIADP 196
Query: 222 EASNPNDMTGETGTLGYMAPEV-LNGNPYNRKCDVYSFGICLWEI 265
E + +T T Y APE+ LN Y + D++S G L E+
Sbjct: 197 EHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 241
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 101/219 (46%), Gaps = 39/219 (17%)
Query: 57 VIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAF------TQEVAVWHK 110
VI G+FG V++ KL D GE + A++ +E+ + K
Sbjct: 63 VIGNGSFGVVYQA---------KLCDSGE--------LVAIKKVLQDKRFKNRELQIMRK 105
Query: 111 LDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLA 170
LDH N+ + S E + +V + +V++Y+P + +R ++
Sbjct: 106 LDHCNIVRLRYFFYSSGE-----KKDEVYL-----NLVLDYVPETVYRVARHYSRAKQTL 155
Query: 171 FKVVVQLAL-DLARGLSYLHSQKIVHRDVKTENMLLDKNRTV-KIADFGVAR-VEASNPN 227
+ V+L + L R L+Y+HS I HRD+K +N+LLD + V K+ DFG A+ + PN
Sbjct: 156 PVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN 215
Query: 228 DMTGETGTLGYMAPEVLNG-NPYNRKCDVYSFGICLWEI 265
+ Y APE++ G Y DV+S G L E+
Sbjct: 216 --VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 252
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 181 LARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTG----ETGTL 236
+ RGL Y+HS ++HRD+K N+LL+ +KI DFG+ARV A +D TG T
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATR 195
Query: 237 GYMAPEV-LNGNPYNRKCDVYSFGICLWEI 265
Y APE+ LN Y + D++S G L E+
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEM 225
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 181 LARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTG----ETGTL 236
+ RGL Y+HS ++HRD+K N+LL+ +KI DFG+ARV A +D TG T
Sbjct: 135 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATR 193
Query: 237 GYMAPEV-LNGNPYNRKCDVYSFGICLWEI 265
Y APE+ LN Y + D++S G L E+
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEM 223
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 101/219 (46%), Gaps = 39/219 (17%)
Query: 57 VIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAF------TQEVAVWHK 110
VI G+FG V++ KL D GE + A++ +E+ + K
Sbjct: 55 VIGNGSFGVVYQA---------KLCDSGE--------LVAIKKVLQDKRFKNRELQIMRK 97
Query: 111 LDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLA 170
LDH N+ + S E + +V + +V++Y+P + +R ++
Sbjct: 98 LDHCNIVRLRYFFYSSGE-----KKDEVYL-----NLVLDYVPETVYRVARHYSRAKQTL 147
Query: 171 FKVVVQLAL-DLARGLSYLHSQKIVHRDVKTENMLLDKNRTV-KIADFGVAR-VEASNPN 227
+ V+L + L R L+Y+HS I HRD+K +N+LLD + V K+ DFG A+ + PN
Sbjct: 148 PVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN 207
Query: 228 DMTGETGTLGYMAPEVLNG-NPYNRKCDVYSFGICLWEI 265
+ Y APE++ G Y DV+S G L E+
Sbjct: 208 --VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 244
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 181 LARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTG----ETGTL 236
+ RGL Y+HS ++HRD+K N+LL+ +KI DFG+ARV A +D TG T
Sbjct: 133 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATR 191
Query: 237 GYMAPEV-LNGNPYNRKCDVYSFGICLWEI 265
Y APE+ LN Y + D++S G L E+
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEM 221
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 181 LARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTG----ETGTL 236
+ RGL Y+HS ++HRD+K N+LL+ +KI DFG+ARV A +D TG T
Sbjct: 131 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATR 189
Query: 237 GYMAPEV-LNGNPYNRKCDVYSFGICLWEI 265
Y APE+ LN Y + D++S G L E+
Sbjct: 190 WYRAPEIMLNSKGYTKSIDIWSVGCILAEM 219
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 181 LARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTG----ETGTL 236
+ RGL Y+HS ++HRD+K N+LL+ +KI DFG+ARV A +D TG T
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATR 195
Query: 237 GYMAPEV-LNGNPYNRKCDVYSFGICLWEI 265
Y APE+ LN Y + D++S G L E+
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEM 225
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 181 LARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTG----ETGTL 236
+ RGL Y+HS ++HRD+K N+LL+ +KI DFG+ARV A +D TG T
Sbjct: 138 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATR 196
Query: 237 GYMAPEV-LNGNPYNRKCDVYSFGICLWEI 265
Y APE+ LN Y + D++S G L E+
Sbjct: 197 WYRAPEIMLNSKGYTKSIDIWSVGCILAEM 226
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 96/230 (41%), Gaps = 32/230 (13%)
Query: 49 PSKLVIKSVIARGTFGTV--HRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVA 106
P ++ G+F TV R L + A+K+L E+ H + T+E
Sbjct: 7 PEDFKFGKILGEGSFSTVVLARELATSREYAIKIL---EKRHIIKENKVPY---VTRERD 60
Query: 107 VWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRR 166
V +LDHP K +L+ + Y G L Y+ R
Sbjct: 61 VMSRLDHPFFVKLYFTFQDDEKLYFG----------------LSYAKNGELLKYI----R 100
Query: 167 RKLAFKVVVQ--LALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEAS 224
+ +F ++ L YLH + I+HRD+K EN+LL+++ ++I DFG A+V +
Sbjct: 101 KIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSP 160
Query: 225 NPNDMTGE--TGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPY 272
GT Y++PE+L + D+++ G ++++ P+
Sbjct: 161 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 210
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 181 LARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTG----ETGTL 236
+ RGL Y+HS ++HRD+K N+LL+ +KI DFG+ARV A +D TG T
Sbjct: 139 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATR 197
Query: 237 GYMAPEV-LNGNPYNRKCDVYSFGICLWEI 265
Y APE+ LN Y + D++S G L E+
Sbjct: 198 WYRAPEIMLNSKGYTKSIDIWSVGCILAEM 227
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 181 LARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTG----ETGTL 236
+ RGL Y+HS ++HRD+K N+LL+ +KI DFG+ARV A +D TG T
Sbjct: 130 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATR 188
Query: 237 GYMAPEV-LNGNPYNRKCDVYSFGICLWEI 265
Y APE+ LN Y + D++S G L E+
Sbjct: 189 WYRAPEIMLNSKGYTKSIDIWSVGCILAEM 218
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 181 LARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTG----ETGTL 236
+ RGL Y+HS ++HRD+K N+LL+ +KI DFG+ARV A +D TG T
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATR 195
Query: 237 GYMAPEV-LNGNPYNRKCDVYSFGICLWEI 265
Y APE+ LN Y + D++S G L E+
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEM 225
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 181 LARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTG----ETGTL 236
+ RGL Y+HS ++HRD+K N+LL+ +KI DFG+ARV A +D TG T
Sbjct: 131 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATR 189
Query: 237 GYMAPEV-LNGNPYNRKCDVYSFGICLWEI 265
Y APE+ LN Y + D++S G L E+
Sbjct: 190 WYRAPEIMLNSKGYTKSIDIWSVGCILAEM 219
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 181 LARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTG----ETGTL 236
+ RGL Y+HS ++HRD+K N+LL+ +KI DFG+ARV A +D TG T
Sbjct: 135 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATR 193
Query: 237 GYMAPEV-LNGNPYNRKCDVYSFGICLWEI 265
Y APE+ LN Y + D++S G L E+
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEM 223
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 181 LARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTG----ETGTL 236
+ RGL Y+HS ++HRD+K N+LL+ +KI DFG+ARV A +D TG T
Sbjct: 153 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATR 211
Query: 237 GYMAPEV-LNGNPYNRKCDVYSFGICLWEI 265
Y APE+ LN Y + D++S G L E+
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEM 241
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 181 LARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTG----ETGTL 236
+ RGL Y+HS ++HRD+K N+LL+ +KI DFG+ARV A +D TG T
Sbjct: 141 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATR 199
Query: 237 GYMAPEV-LNGNPYNRKCDVYSFGICLWEI 265
Y APE+ LN Y + D++S G L E+
Sbjct: 200 WYRAPEIMLNSKGYTKSIDIWSVGCILAEM 229
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 181 LARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTG----ETGTL 236
+ RGL Y+HS ++HRD+K N+LL+ +KI DFG+ARV A +D TG T
Sbjct: 133 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATR 191
Query: 237 GYMAPEV-LNGNPYNRKCDVYSFGICLWEI 265
Y APE+ LN Y + D++S G L E+
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEM 221
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 96/230 (41%), Gaps = 32/230 (13%)
Query: 49 PSKLVIKSVIARGTFGTV--HRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVA 106
P ++ G+F TV R L + A+K+L E+ H + T+E
Sbjct: 6 PEDFKFGKILGEGSFSTVVLARELATSREYAIKIL---EKRHIIKENKVPY---VTRERD 59
Query: 107 VWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRR 166
V +LDHP K +L+ + Y G L Y+ R
Sbjct: 60 VMSRLDHPFFVKLYFTFQDDEKLYFG----------------LSYAKNGELLKYI----R 99
Query: 167 RKLAFKVVVQ--LALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEAS 224
+ +F ++ L YLH + I+HRD+K EN+LL+++ ++I DFG A+V +
Sbjct: 100 KIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSP 159
Query: 225 NPNDMTGE--TGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPY 272
GT Y++PE+L + D+++ G ++++ P+
Sbjct: 160 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 209
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 101/219 (46%), Gaps = 39/219 (17%)
Query: 57 VIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAF------TQEVAVWHK 110
VI G+FG V++ KL D GE + A++ +E+ + K
Sbjct: 32 VIGNGSFGVVYQA---------KLCDSGE--------LVAIKKVLQDKRFKNRELQIMRK 74
Query: 111 LDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLA 170
LDH N+ + S E + +V + +V++Y+P + +R ++
Sbjct: 75 LDHCNIVRLRYFFYSSGE-----KKDEVYL-----NLVLDYVPETVYRVARHYSRAKQTL 124
Query: 171 FKVVVQLAL-DLARGLSYLHSQKIVHRDVKTENMLLDKNRTV-KIADFGVAR-VEASNPN 227
+ V+L + L R L+Y+HS I HRD+K +N+LLD + V K+ DFG A+ + PN
Sbjct: 125 PVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN 184
Query: 228 DMTGETGTLGYMAPEVLNG-NPYNRKCDVYSFGICLWEI 265
+ Y APE++ G Y DV+S G L E+
Sbjct: 185 --VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 221
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 101/219 (46%), Gaps = 39/219 (17%)
Query: 57 VIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAF------TQEVAVWHK 110
VI G+FG V++ KL D GE + A++ +E+ + K
Sbjct: 106 VIGNGSFGVVYQA---------KLCDSGE--------LVAIKKVLQDKRFKNRELQIMRK 148
Query: 111 LDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLA 170
LDH N+ + S E + +V + +V++Y+P + +R ++
Sbjct: 149 LDHCNIVRLRYFFYSSGE-----KKDEVYL-----NLVLDYVPETVYRVARHYSRAKQTL 198
Query: 171 FKVVVQLAL-DLARGLSYLHSQKIVHRDVKTENMLLDKNRTV-KIADFGVAR-VEASNPN 227
+ V+L + L R L+Y+HS I HRD+K +N+LLD + V K+ DFG A+ + PN
Sbjct: 199 PVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN 258
Query: 228 DMTGETGTLGYMAPEVLNG-NPYNRKCDVYSFGICLWEI 265
+ Y APE++ G Y DV+S G L E+
Sbjct: 259 --VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 295
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 101/219 (46%), Gaps = 39/219 (17%)
Query: 57 VIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAF------TQEVAVWHK 110
VI G+FG V++ KL D GE + A++ +E+ + K
Sbjct: 65 VIGNGSFGVVYQA---------KLCDSGE--------LVAIKKVLQDKRFKNRELQIMRK 107
Query: 111 LDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLA 170
LDH N+ + S E + +V + +V++Y+P + +R ++
Sbjct: 108 LDHCNIVRLRYFFYSSGE-----KKDEVYL-----NLVLDYVPETVYRVARHYSRAKQTL 157
Query: 171 FKVVVQLAL-DLARGLSYLHSQKIVHRDVKTENMLLDKNRTV-KIADFGVAR-VEASNPN 227
+ V+L + L R L+Y+HS I HRD+K +N+LLD + V K+ DFG A+ + PN
Sbjct: 158 PVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN 217
Query: 228 DMTGETGTLGYMAPEVLNG-NPYNRKCDVYSFGICLWEI 265
+ Y APE++ G Y DV+S G L E+
Sbjct: 218 --VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 254
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 71/145 (48%), Gaps = 18/145 (12%)
Query: 184 GLSYLHSQKIVHRDVKTENMLLDKNR-TVKIADFGVARVEASNPNDMTGETGTLGYMAPE 242
+ + HS+ +VHRD+K EN+L+D R K+ DFG + P T GT Y PE
Sbjct: 151 AIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEP--YTDFDGTRVYSPPE 208
Query: 243 VLNGNPYNR-KCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEI---PRCCP 298
++ + Y+ V+S GI L+++ C D+P+ E ++ L P CC
Sbjct: 209 WISRHQYHALPATVWSLGILLYDMVCGDIPF------ERDQEILEAELHFPAHVSPDCC- 261
Query: 299 SSLANVMKRCWDANPDKRPEMDEVV 323
+++RC P RP ++E++
Sbjct: 262 ----ALIRRCLAPKPSSRPSLEEIL 282
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 115/298 (38%), Gaps = 34/298 (11%)
Query: 58 IARGTFGTVHR--GLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPN 115
I +G F V R L GH+ A K+++ T+ A +E + L H N
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIIN-------TKKLSARDHQKLEREARICRLLKHSN 64
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVV 175
+ + + ++ H +V + + GG L ++ R +
Sbjct: 65 IVR-LHDSISEEGFHY---------------LVFDLVTGGELFEDIVA--REYYSEADAS 106
Query: 176 QLALDLARGLSYLHSQKIVHRDVKTENMLLD---KNRTVKIADFGVARVEASNPNDMTGE 232
+ + + H +VHRD+K EN+LL K VK+ADFG+A + G
Sbjct: 107 HCIQQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGF 166
Query: 233 TGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPD---LSFSEVTSAVVRQNL 289
GT GY++PEVL Y + D+++ G+ L+ + P+ D + A
Sbjct: 167 AGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFP 226
Query: 290 RPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTSKGGGMIPGDQPQGCL 347
PE P + N++ + NP KR E + S M+ + CL
Sbjct: 227 SPEWDTVTPEA-KNLINQMLTINPAKRITAHEALKHPWVCQRSTVASMMHRQETVECL 283
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Query: 189 HSQKIVHRDVKTENMLLD---KNRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLN 245
H +VHRD+K EN+LL K VK+ADFG+A G GT GY++PEVL
Sbjct: 138 HQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLR 197
Query: 246 GNPYNRKCDVYSFGICLWEIYCCDMPYPD 274
+PY + D+++ G+ L+ + P+ D
Sbjct: 198 KDPYGKPVDLWACGVILYILLVGYPPFWD 226
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 63/124 (50%), Gaps = 11/124 (8%)
Query: 174 VVQLALDLAR----------GLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEA 223
V+Q+ LD R G+ +LHS I+HRD+K N+++ + T+KI DFG+AR A
Sbjct: 118 VIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART-A 176
Query: 224 SNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA 283
MT T Y APEV+ G Y D++S G + E+ + +P + +
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK 236
Query: 284 VVRQ 287
V+ Q
Sbjct: 237 VIEQ 240
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 63/124 (50%), Gaps = 11/124 (8%)
Query: 174 VVQLALDLAR----------GLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEA 223
V+Q+ LD R G+ +LHS I+HRD+K N+++ + T+KI DFG+AR A
Sbjct: 118 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART-A 176
Query: 224 SNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA 283
MT T Y APEV+ G Y D++S G + E+ + +P + +
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK 236
Query: 284 VVRQ 287
V+ Q
Sbjct: 237 VIEQ 240
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 64/124 (51%), Gaps = 11/124 (8%)
Query: 174 VVQLALDLAR----------GLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEA 223
V+Q+ LD R G+ +LHS I+HRD+K N+++ + T+KI DFG+AR A
Sbjct: 119 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-A 177
Query: 224 SNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA 283
MT T Y APEV+ G Y D++S G + E+ + +P + + +
Sbjct: 178 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 237
Query: 284 VVRQ 287
V+ Q
Sbjct: 238 VIEQ 241
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 63/124 (50%), Gaps = 11/124 (8%)
Query: 174 VVQLALDLAR----------GLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEA 223
V+Q+ LD R G+ +LHS I+HRD+K N+++ + T+KI DFG+AR A
Sbjct: 118 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART-A 176
Query: 224 SNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA 283
MT T Y APEV+ G Y D++S G + E+ + +P + +
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK 236
Query: 284 VVRQ 287
V+ Q
Sbjct: 237 VIEQ 240
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 64/124 (51%), Gaps = 11/124 (8%)
Query: 174 VVQLALDLAR----------GLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEA 223
V+Q+ LD R G+ +LHS I+HRD+K N+++ + T+KI DFG+AR A
Sbjct: 118 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-A 176
Query: 224 SNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA 283
MT T Y APEV+ G Y D++S G + E+ + +P + + +
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 236
Query: 284 VVRQ 287
V+ Q
Sbjct: 237 VIEQ 240
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 99/241 (41%), Gaps = 29/241 (12%)
Query: 58 IARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPN 115
I G++G V R G VA+K E+ ++ +E+ + +L HPN
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDD-------PVIKKIALREIRMLKQLKHPN 63
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVV 175
+ + LH+ V EY L + +R + +V
Sbjct: 64 LVNLLEVFRRKRRLHL----------------VFEYCDHTVLHE--LDRYQRGVPEHLVK 105
Query: 176 QLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETGT 235
+ + +++ H +HRDVK EN+L+ K+ +K+ DFG AR+ + E T
Sbjct: 106 SITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVAT 165
Query: 236 LGYMAPEVLNGNP-YNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIP 294
Y +PE+L G+ Y DV++ G E+ +P S + ++R+ L IP
Sbjct: 166 RWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVD-QLYLIRKTLGDLIP 224
Query: 295 R 295
R
Sbjct: 225 R 225
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 95/222 (42%), Gaps = 32/222 (14%)
Query: 57 VIARGTFGTV--HRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHP 114
++ G+F TV R L + A+K+L E+ H + T+E V +LDHP
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKIL---EKRHIIKENKVPY---VTRERDVMSRLDHP 92
Query: 115 NVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVV 174
K +L+ + Y G L Y+ R+ +F
Sbjct: 93 FFVKLYFTFQDDEKLYFG----------------LSYAKNGELLKYI----RKIGSFDET 132
Query: 175 VQ--LALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGE 232
++ L YLH + I+HRD+K EN+LL+++ ++I DFG A+V +
Sbjct: 133 CTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 192
Query: 233 --TGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPY 272
GT Y++PE+L + D+++ G ++++ P+
Sbjct: 193 XFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPF 234
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 64/124 (51%), Gaps = 11/124 (8%)
Query: 174 VVQLALDLAR----------GLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEA 223
V+Q+ LD R G+ +LHS I+HRD+K N+++ + T+KI DFG+AR A
Sbjct: 119 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-A 177
Query: 224 SNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA 283
MT T Y APEV+ G Y D++S G + E+ + +P + + +
Sbjct: 178 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 237
Query: 284 VVRQ 287
V+ Q
Sbjct: 238 VIEQ 241
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 64/124 (51%), Gaps = 11/124 (8%)
Query: 174 VVQLALDLAR----------GLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEA 223
V+Q+ LD R G+ +LHS I+HRD+K N+++ + T+KI DFG+AR A
Sbjct: 118 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-A 176
Query: 224 SNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA 283
MT T Y APEV+ G Y D++S G + E+ + +P + + +
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 236
Query: 284 VVRQ 287
V+ Q
Sbjct: 237 VIEQ 240
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 64/124 (51%), Gaps = 11/124 (8%)
Query: 174 VVQLALDLAR----------GLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEA 223
V+Q+ LD R G+ +LHS I+HRD+K N+++ + T+KI DFG+AR A
Sbjct: 117 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-A 175
Query: 224 SNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA 283
MT T Y APEV+ G Y D++S G + E+ + +P + + +
Sbjct: 176 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 235
Query: 284 VVRQ 287
V+ Q
Sbjct: 236 VIEQ 239
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 96/222 (43%), Gaps = 32/222 (14%)
Query: 57 VIARGTFGTV--HRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHP 114
++ G+F TV R L + A+K+L E+ H + T+E V +LDHP
Sbjct: 40 ILGEGSFSTVVLARELATSREYAIKIL---EKRHIIKENKVPY---VTRERDVMSRLDHP 93
Query: 115 NVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVV 174
K +L+ + Y G L Y+ R+ +F
Sbjct: 94 FFVKLYFTFQDDEKLYFG----------------LSYAKNGELLKYI----RKIGSFDET 133
Query: 175 VQ--LALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGE 232
++ L YLH + I+HRD+K EN+LL+++ ++I DFG A+V +
Sbjct: 134 CTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 193
Query: 233 T--GTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPY 272
+ GT Y++PE+L + D+++ G ++++ P+
Sbjct: 194 SFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 235
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 64/124 (51%), Gaps = 11/124 (8%)
Query: 174 VVQLALDLAR----------GLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEA 223
V+Q+ LD R G+ +LHS I+HRD+K N+++ + T+KI DFG+AR A
Sbjct: 112 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-A 170
Query: 224 SNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA 283
MT T Y APEV+ G Y D++S G + E+ + +P + + +
Sbjct: 171 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 230
Query: 284 VVRQ 287
V+ Q
Sbjct: 231 VIEQ 234
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 64/124 (51%), Gaps = 11/124 (8%)
Query: 174 VVQLALDLAR----------GLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEA 223
V+Q+ LD R G+ +LHS I+HRD+K N+++ + T+KI DFG+AR A
Sbjct: 112 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-A 170
Query: 224 SNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA 283
MT T Y APEV+ G Y D++S G + E+ + +P + + +
Sbjct: 171 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 230
Query: 284 VVRQ 287
V+ Q
Sbjct: 231 VIEQ 234
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 64/124 (51%), Gaps = 11/124 (8%)
Query: 174 VVQLALDLAR----------GLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEA 223
V+Q+ LD R G+ +LHS I+HRD+K N+++ + T+KI DFG+AR A
Sbjct: 111 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-A 169
Query: 224 SNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA 283
MT T Y APEV+ G Y D++S G + E+ + +P + + +
Sbjct: 170 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 229
Query: 284 VVRQ 287
V+ Q
Sbjct: 230 VIEQ 233
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 75/145 (51%), Gaps = 9/145 (6%)
Query: 147 VVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENML-L 205
VV E GG L ++ R++ + + + + + + YLH+Q +VHRD+K N+L +
Sbjct: 93 VVTELXKGGELLDKIL--RQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYV 150
Query: 206 DKN---RTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICL 262
D++ +++I DFG A+ + + T ++APEVL Y+ CD++S G+ L
Sbjct: 151 DESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLL 210
Query: 263 WEIYCCDMPY---PDLSFSEVTSAV 284
+ P+ PD + E+ + +
Sbjct: 211 YTXLTGYTPFANGPDDTPEEILARI 235
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 73/134 (54%), Gaps = 21/134 (15%)
Query: 147 VVVEYLPGGALKTYLIKNRR-RKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLL 205
+V E + GG++ +++ K R +L VVVQ D+A L +LH++ I HRD+K EN+L
Sbjct: 88 LVFEKMRGGSILSHIHKRRHFNELEASVVVQ---DVASALDFLHNKGIAHRDLKPENILC 144
Query: 206 D---KNRTVKIADFGVAR--------VEASNPNDMTGETGTLGYMAPEVL-----NGNPY 249
+ + VKI DF + S P +T G+ YMAPEV+ + Y
Sbjct: 145 EHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLT-PCGSAEYMAPEVVEAFSEEASIY 203
Query: 250 NRKCDVYSFGICLW 263
+++CD++S G+ L+
Sbjct: 204 DKRCDLWSLGVILY 217
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 95/212 (44%), Gaps = 33/212 (15%)
Query: 58 IARGTFGTVHRGL-YDGHD-VAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPN 115
I GT+GTV + + H+ VA+K + R + + + S+ +E+ + +L H N
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRV-------RLDDDDEGVPSSALREICLLKELKHKN 62
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVV 175
+ + +L + E C LK Y + L ++V
Sbjct: 63 IVRLHDVLHSDKKLTLVFE---------FC--------DQDLKKYF-DSCNGDLDPEIVK 104
Query: 176 QLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETGT 235
L +GL + HS+ ++HRD+K +N+L+++N +K+A+FG+AR + E T
Sbjct: 105 SFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVT 164
Query: 236 LGYMAPEVLNGNPYNRKCDVYSFGICLWEIYC 267
L Y P+VL G +YS I +W C
Sbjct: 165 LWYRPPDVLFG------AKLYSTSIDMWSAGC 190
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 64/124 (51%), Gaps = 11/124 (8%)
Query: 174 VVQLALDLAR----------GLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEA 223
V+Q+ LD R G+ +LHS I+HRD+K N+++ + T+KI DFG+AR A
Sbjct: 156 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-A 214
Query: 224 SNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA 283
MT T Y APEV+ G Y D++S G + E+ + +P + + +
Sbjct: 215 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 274
Query: 284 VVRQ 287
V+ Q
Sbjct: 275 VIEQ 278
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 100/219 (45%), Gaps = 39/219 (17%)
Query: 57 VIARGTFGTVHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAF------TQEVAVWHK 110
VI G+FG V++ KL D GE + A++ +E+ + K
Sbjct: 27 VIGNGSFGVVYQA---------KLCDSGE--------LVAIKKVLQDKRFKNRELQIMRK 69
Query: 111 LDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLA 170
LDH N+ + S E + V + +V++Y+P + +R ++
Sbjct: 70 LDHCNIVRLRYFFYSSGE-----KKDVVYL-----NLVLDYVPETVYRVARHYSRAKQTL 119
Query: 171 FKVVVQLAL-DLARGLSYLHSQKIVHRDVKTENMLLDKNRTV-KIADFGVAR-VEASNPN 227
+ V+L + L R L+Y+HS I HRD+K +N+LLD + V K+ DFG A+ + PN
Sbjct: 120 PVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN 179
Query: 228 DMTGETGTLGYMAPEVLNG-NPYNRKCDVYSFGICLWEI 265
+ Y APE++ G Y DV+S G L E+
Sbjct: 180 --VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 216
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 64/124 (51%), Gaps = 11/124 (8%)
Query: 174 VVQLALDLAR----------GLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEA 223
V+Q+ LD R G+ +LHS I+HRD+K N+++ + T+KI DFG+AR A
Sbjct: 156 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-A 214
Query: 224 SNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA 283
MT T Y APEV+ G Y D++S G + E+ + +P + + +
Sbjct: 215 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 274
Query: 284 VVRQ 287
V+ Q
Sbjct: 275 VIEQ 278
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 96/222 (43%), Gaps = 32/222 (14%)
Query: 57 VIARGTFGTV--HRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHP 114
++ G+F TV R L + A+K+L E+ H + T+E V +LDHP
Sbjct: 37 ILGEGSFSTVVLARELATSREYAIKIL---EKRHIIKENKVPY---VTRERDVMSRLDHP 90
Query: 115 NVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVV 174
K +L+ + Y G L Y+ R+ +F
Sbjct: 91 FFVKLYFTFQDDEKLYFG----------------LSYAKNGELLKYI----RKIGSFDET 130
Query: 175 VQ--LALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEA--SNPNDMT 230
++ L YLH + I+HRD+K EN+LL+++ ++I DFG A+V + S
Sbjct: 131 CTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 190
Query: 231 GETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPY 272
GT Y++PE+L + D+++ G ++++ P+
Sbjct: 191 AFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 132/303 (43%), Gaps = 38/303 (12%)
Query: 32 GKASNFLKKQRQDWEIEPSKLVIKSVIARGTFGTVHRGLY--DGHDVAVKLLDWGEEGHR 89
GK + +L Q ++ E + L + GT G V + + GH +AVK + G++
Sbjct: 7 GKQTGYLTIGGQRYQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMR--RSGNK 64
Query: 90 TEAEIAALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVV 149
E + R +V V D P + + G + ++++ I E
Sbjct: 65 EENK----RILMDLDV-VLKSHDCPYIVQCFGTFITNTDVFIAME--------------- 104
Query: 150 EYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQK-IVHRDVKTENMLLDKN 208
G L K + + +++ ++ + + + L YL + ++HRDVK N+LLD+
Sbjct: 105 ---LMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDER 161
Query: 209 RTVKIADFGVA-RVEASNPNDMTGETGTLGYMAPEVLN-GNP----YNRKCDVYSFGICL 262
+K+ DFG++ R+ D + G YMAPE ++ +P Y+ + DV+S GI L
Sbjct: 162 GQIKLCDFGISGRLVDDKAKDRS--AGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISL 219
Query: 263 WEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSS--LANVMKRCWDANPDKRPEMD 320
E+ PY + V Q P +P S + +K C + KRP+ +
Sbjct: 220 VELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYN 279
Query: 321 EVV 323
+++
Sbjct: 280 KLL 282
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 95/222 (42%), Gaps = 32/222 (14%)
Query: 57 VIARGTFGTV--HRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHP 114
++ G+F TV R L + A+K+L E+ H + T+E V +LDHP
Sbjct: 40 ILGEGSFSTVVLARELATSREYAIKIL---EKRHIIKENKVPY---VTRERDVMSRLDHP 93
Query: 115 NVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVV 174
K +L+ + Y G L Y+ R+ +F
Sbjct: 94 FFVKLYFTFQDDEKLYFG----------------LSYAKNGELLKYI----RKIGSFDET 133
Query: 175 VQ--LALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGE 232
++ L YLH + I+HRD+K EN+LL+++ ++I DFG A+V +
Sbjct: 134 CTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 193
Query: 233 --TGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPY 272
GT Y++PE+L + D+++ G ++++ P+
Sbjct: 194 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 235
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 80/175 (45%), Gaps = 23/175 (13%)
Query: 101 FTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTY 160
F QE+ + LDHPN+ + ++++++ V+E GG L
Sbjct: 53 FKQEIEIMKSLDHPNIIRLYETFEDNTDIYL----------------VMELCTGGELFER 96
Query: 161 LIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLL---DKNRTVKIADFG 217
++ +R ++ D+ ++Y H + HRD+K EN L + +K+ DFG
Sbjct: 97 VV--HKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFG 154
Query: 218 VARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPY 272
+A M + GT Y++P+VL G Y +CD +S G+ ++ + C P+
Sbjct: 155 LA-ARFKPGKMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPF 207
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 95/222 (42%), Gaps = 32/222 (14%)
Query: 57 VIARGTFGTV--HRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHP 114
++ G+F TV R L + A+K+L E+ H + T+E V +LDHP
Sbjct: 37 ILGEGSFSTVVLARELATSREYAIKIL---EKRHIIKENKVPY---VTRERDVMSRLDHP 90
Query: 115 NVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVV 174
K +L+ + Y G L Y+ R+ +F
Sbjct: 91 FFVKLYFTFQDDEKLYFG----------------LSYAKNGELLKYI----RKIGSFDET 130
Query: 175 VQ--LALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGE 232
++ L YLH + I+HRD+K EN+LL+++ ++I DFG A+V +
Sbjct: 131 CTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 190
Query: 233 --TGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPY 272
GT Y++PE+L + D+++ G ++++ P+
Sbjct: 191 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 95/222 (42%), Gaps = 32/222 (14%)
Query: 57 VIARGTFGTV--HRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHP 114
++ G+F TV R L + A+K+L E+ H + T+E V +LDHP
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKIL---EKRHIIKENKVPY---VTRERDVMSRLDHP 92
Query: 115 NVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVV 174
K +L+ + Y G L Y+ R+ +F
Sbjct: 93 FFVKLYFTFQDDEKLYFG----------------LSYAKNGELLKYI----RKIGSFDET 132
Query: 175 VQ--LALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGE 232
++ L YLH + I+HRD+K EN+LL+++ ++I DFG A+V +
Sbjct: 133 CTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 192
Query: 233 --TGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPY 272
GT Y++PE+L + D+++ G ++++ P+
Sbjct: 193 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 95/222 (42%), Gaps = 32/222 (14%)
Query: 57 VIARGTFGTV--HRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHP 114
++ G+F TV R L + A+K+L E+ H + T+E V +LDHP
Sbjct: 37 ILGEGSFSTVVLARELATSREYAIKIL---EKRHIIKENKVPY---VTRERDVMSRLDHP 90
Query: 115 NVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVV 174
K +L+ + Y G L Y+ R+ +F
Sbjct: 91 FFVKLYFTFQDDEKLYFG----------------LSYAKNGELLKYI----RKIGSFDET 130
Query: 175 VQ--LALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGE 232
++ L YLH + I+HRD+K EN+LL+++ ++I DFG A+V +
Sbjct: 131 CTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 190
Query: 233 --TGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPY 272
GT Y++PE+L + D+++ G ++++ P+
Sbjct: 191 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 80/175 (45%), Gaps = 23/175 (13%)
Query: 101 FTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTY 160
F QE+ + LDHPN+ + ++++++ V+E GG L
Sbjct: 70 FKQEIEIMKSLDHPNIIRLYETFEDNTDIYL----------------VMELCTGGELFER 113
Query: 161 LIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLL---DKNRTVKIADFG 217
++ +R ++ D+ ++Y H + HRD+K EN L + +K+ DFG
Sbjct: 114 VV--HKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFG 171
Query: 218 VARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPY 272
+A M + GT Y++P+VL G Y +CD +S G+ ++ + C P+
Sbjct: 172 LA-ARFKPGKMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPF 224
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 95/222 (42%), Gaps = 32/222 (14%)
Query: 57 VIARGTFGTV--HRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHP 114
++ G+F TV R L + A+K+L E+ H + T+E V +LDHP
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKIL---EKRHIIKENKVPY---VTRERDVMSRLDHP 92
Query: 115 NVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVV 174
K +L+ + Y G L Y+ R+ +F
Sbjct: 93 FFVKLYFTFQDDEKLYFG----------------LSYAKNGELLKYI----RKIGSFDET 132
Query: 175 VQ--LALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGE 232
++ L YLH + I+HRD+K EN+LL+++ ++I DFG A+V +
Sbjct: 133 CTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 192
Query: 233 --TGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPY 272
GT Y++PE+L + D+++ G ++++ P+
Sbjct: 193 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 96/222 (43%), Gaps = 32/222 (14%)
Query: 57 VIARGTFGTV--HRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHP 114
++ G+F TV R L + A+K+L E+ H + T+E V +LDHP
Sbjct: 36 ILGEGSFSTVVLARELATSREYAIKIL---EKRHIIKENKVPY---VTRERDVMSRLDHP 89
Query: 115 NVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVV 174
K +L+ + Y G L Y+ R+ +F
Sbjct: 90 FFVKLYFTFQDDEKLYFG----------------LSYAKNGELLKYI----RKIGSFDET 129
Query: 175 VQ--LALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGE 232
++ L YLH + I+HRD+K EN+LL+++ ++I DFG A+V +
Sbjct: 130 CTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 189
Query: 233 T--GTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPY 272
+ GT Y++PE+L + D+++ G ++++ P+
Sbjct: 190 SFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 231
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 95/222 (42%), Gaps = 32/222 (14%)
Query: 57 VIARGTFGTV--HRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHP 114
++ G+F TV R L + A+K+L E+ H + T+E V +LDHP
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKIL---EKRHIIKENKVPY---VTRERDVMSRLDHP 92
Query: 115 NVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVV 174
K +L+ + Y G L Y+ R+ +F
Sbjct: 93 FFVKLYFTFQDDEKLYFG----------------LSYAKNGELLKYI----RKIGSFDET 132
Query: 175 VQ--LALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGE 232
++ L YLH + I+HRD+K EN+LL+++ ++I DFG A+V +
Sbjct: 133 CTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 192
Query: 233 --TGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPY 272
GT Y++PE+L + D+++ G ++++ P+
Sbjct: 193 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 95/222 (42%), Gaps = 32/222 (14%)
Query: 57 VIARGTFGTV--HRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHP 114
++ G+F TV R L + A+K+L E+ H + T+E V +LDHP
Sbjct: 44 ILGEGSFSTVVLARELATSREYAIKIL---EKRHIIKENKVPY---VTRERDVMSRLDHP 97
Query: 115 NVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVV 174
K +L+ + Y G L Y+ R+ +F
Sbjct: 98 FFVKLYFCFQDDEKLYFG----------------LSYAKNGELLKYI----RKIGSFDET 137
Query: 175 VQ--LALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGE 232
++ L YLH + I+HRD+K EN+LL+++ ++I DFG A+V +
Sbjct: 138 CTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 197
Query: 233 --TGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPY 272
GT Y++PE+L + D+++ G ++++ P+
Sbjct: 198 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 239
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 95/222 (42%), Gaps = 32/222 (14%)
Query: 57 VIARGTFGTV--HRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHP 114
++ G+F TV R L + A+K+L E+ H + T+E V +LDHP
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKIL---EKRHIIKENKVPY---VTRERDVMSRLDHP 92
Query: 115 NVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVV 174
K +L+ + Y G L Y+ R+ +F
Sbjct: 93 FFVKLYFTFQDDEKLYFG----------------LSYAKNGELLKYI----RKIGSFDET 132
Query: 175 VQ--LALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGE 232
++ L YLH + I+HRD+K EN+LL+++ ++I DFG A+V +
Sbjct: 133 CTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 192
Query: 233 --TGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPY 272
GT Y++PE+L + D+++ G ++++ P+
Sbjct: 193 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 102/230 (44%), Gaps = 40/230 (17%)
Query: 53 VIKSVIARGTFGTVHRGLYDGHDV--AVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHK 110
V+K I G++ R ++ ++ AVK++D + E EI LR
Sbjct: 30 VVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEIL-LRYG---------- 78
Query: 111 LDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLA 170
HPN+ +++ V E + GG L L K R+K
Sbjct: 79 -QHPNIITLKDVYDDGKHVYL----------------VTELMRGGEL---LDKILRQKFF 118
Query: 171 FKVVVQLAL-DLARGLSYLHSQKIVHRDVKTENML-LDKN---RTVKIADFGVAR-VEAS 224
+ L + + + YLHSQ +VHRD+K N+L +D++ ++I DFG A+ + A
Sbjct: 119 SEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAE 178
Query: 225 NPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPD 274
N MT T ++APEVL Y+ CD++S GI L+ + P+ +
Sbjct: 179 NGLLMT-PCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFAN 227
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 95/222 (42%), Gaps = 32/222 (14%)
Query: 57 VIARGTFGTV--HRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHP 114
++ G+F TV R L + A+K+L E+ H + T+E V +LDHP
Sbjct: 42 ILGEGSFSTVVLARELATSREYAIKIL---EKRHIIKENKVPY---VTRERDVMSRLDHP 95
Query: 115 NVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVV 174
K +L+ + Y G L Y+ R+ +F
Sbjct: 96 FFVKLYFTFQDDEKLYFG----------------LSYAKNGELLKYI----RKIGSFDET 135
Query: 175 VQ--LALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGE 232
++ L YLH + I+HRD+K EN+LL+++ ++I DFG A+V +
Sbjct: 136 CTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 195
Query: 233 --TGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPY 272
GT Y++PE+L + D+++ G ++++ P+
Sbjct: 196 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 237
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 80/159 (50%), Gaps = 11/159 (6%)
Query: 173 VVVQLALDLARGLSYLHSQ-KIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTG 231
++ ++A+ + + L +LHS+ ++HRDVK N+L++ VK+ DFG++ + T
Sbjct: 154 ILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAK-TI 212
Query: 232 ETGTLGYMAPE----VLNGNPYNRKCDVYSFGICLWEIYCCDMPYPD--LSFSEVTSAVV 285
+ G YMAPE LN Y+ K D++S GI + E+ PY F ++ V
Sbjct: 213 DAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVV- 271
Query: 286 RQNLRPEIPRCCPSS-LANVMKRCWDANPDKRPEMDEVV 323
+ P++P S+ + +C N +RP E++
Sbjct: 272 -EEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELM 309
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 95/222 (42%), Gaps = 32/222 (14%)
Query: 57 VIARGTFGTV--HRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHP 114
++ G+F TV R L + A+K+L E+ H + T+E V +LDHP
Sbjct: 21 ILGEGSFSTVVLARELATSREYAIKIL---EKRHIIKENKVPY---VTRERDVMSRLDHP 74
Query: 115 NVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVV 174
K +L+ + Y G L Y+ R+ +F
Sbjct: 75 FFVKLYFTFQDDEKLYFG----------------LSYAKNGELLKYI----RKIGSFDET 114
Query: 175 VQ--LALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGE 232
++ L YLH + I+HRD+K EN+LL+++ ++I DFG A+V +
Sbjct: 115 CTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 174
Query: 233 --TGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPY 272
GT Y++PE+L + D+++ G ++++ P+
Sbjct: 175 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 216
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 102/230 (44%), Gaps = 40/230 (17%)
Query: 53 VIKSVIARGTFGTVHRGLYDGHDV--AVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHK 110
V+K I G++ R ++ ++ AVK++D + E EI LR
Sbjct: 30 VVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEIL-LRYG---------- 78
Query: 111 LDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLA 170
HPN+ +++ V E + GG L L K R+K
Sbjct: 79 -QHPNIITLKDVYDDGKHVYL----------------VTELMRGGEL---LDKILRQKFF 118
Query: 171 FKVVVQLAL-DLARGLSYLHSQKIVHRDVKTENML-LDKN---RTVKIADFGVAR-VEAS 224
+ L + + + YLHSQ +VHRD+K N+L +D++ ++I DFG A+ + A
Sbjct: 119 SEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAE 178
Query: 225 NPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPD 274
N MT T ++APEVL Y+ CD++S GI L+ + P+ +
Sbjct: 179 NGLLMT-PCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFAN 227
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 63/124 (50%), Gaps = 11/124 (8%)
Query: 174 VVQLALDLAR----------GLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEA 223
V+Q+ LD R G+ +LHS I+HRD+K N+++ + T+KI DFG+AR A
Sbjct: 119 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-A 177
Query: 224 SNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA 283
MT T Y APEV+ G Y D++S G + E+ + +P + +
Sbjct: 178 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK 237
Query: 284 VVRQ 287
V+ Q
Sbjct: 238 VIEQ 241
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 63/124 (50%), Gaps = 11/124 (8%)
Query: 174 VVQLALDLAR----------GLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEA 223
V+Q+ LD R G+ +LHS I+HRD+K N+++ + T+KI DFG+AR A
Sbjct: 118 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-A 176
Query: 224 SNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA 283
MT T Y APEV+ G Y D++S G + E+ + +P + +
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK 236
Query: 284 VVRQ 287
V+ Q
Sbjct: 237 VIEQ 240
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 63/124 (50%), Gaps = 11/124 (8%)
Query: 174 VVQLALDLAR----------GLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEA 223
V+Q+ LD R G+ +LHS I+HRD+K N+++ + T+KI DFG+AR A
Sbjct: 118 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-A 176
Query: 224 SNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA 283
MT T Y APEV+ G Y D++S G + E+ + +P + +
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK 236
Query: 284 VVRQ 287
V+ Q
Sbjct: 237 VIEQ 240
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 184 GLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEV 243
G+ +LHS I+HRD+K N+++ + T+KI DFG+AR ++N MT T Y APEV
Sbjct: 136 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFM-MTPYVVTRYYRAPEV 194
Query: 244 LNGNPYNRKCDVYSFGICLWEI 265
+ G Y D++S G + E+
Sbjct: 195 ILGMGYKENVDIWSVGCIMGEL 216
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 63/124 (50%), Gaps = 11/124 (8%)
Query: 174 VVQLALDLAR----------GLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEA 223
V+Q+ LD R G+ +LHS I+HRD+K N+++ + T+KI DFG+AR A
Sbjct: 118 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-A 176
Query: 224 SNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA 283
MT T Y APEV+ G Y D++S G + E+ + +P + +
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK 236
Query: 284 VVRQ 287
V+ Q
Sbjct: 237 VIEQ 240
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 95/222 (42%), Gaps = 32/222 (14%)
Query: 57 VIARGTFGTV--HRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHP 114
++ G+F TV R L + A+K+L E+ H + T+E V +LDHP
Sbjct: 36 ILGEGSFSTVVLARELATSREYAIKIL---EKRHIIKENKVPY---VTRERDVMSRLDHP 89
Query: 115 NVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVV 174
K +L+ + Y G L Y+ R+ +F
Sbjct: 90 FFVKLYFTFQDDEKLYFG----------------LSYAKNGELLKYI----RKIGSFDET 129
Query: 175 VQ--LALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGE 232
++ L YLH + I+HRD+K EN+LL+++ ++I DFG A+V +
Sbjct: 130 CTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 189
Query: 233 --TGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPY 272
GT Y++PE+L + D+++ G ++++ P+
Sbjct: 190 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 231
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 112/267 (41%), Gaps = 40/267 (14%)
Query: 38 LKKQRQDWEIEPSKLVIKSVIARGTFGTVH--RGLYDGHDVAVKLLDWGEEGHRTEAEIA 95
++ QR D+EI VI RG F V + G A+K+++ + R E
Sbjct: 56 VRLQRDDFEI-------LKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEV--- 105
Query: 96 ALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGG 155
S F +E V D +T +LH ++ N +V+EY GG
Sbjct: 106 ---SCFREERDVLVNGDRRWIT----------QLHFAFQD------ENYLYLVMEYYVGG 146
Query: 156 ALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIAD 215
L T L K R A LA ++ + +H VHRD+K +N+LLD+ +++AD
Sbjct: 147 DLLTLLSKFGERIPAEMARFYLA-EIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLAD 205
Query: 216 FG-VARVEASNPNDMTGETGTLGYMAPEVLNG-------NPYNRKCDVYSFGICLWEIYC 267
FG ++ A GT Y++PE+L Y +CD ++ G+ +E++
Sbjct: 206 FGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFY 265
Query: 268 CDMPYPDLSFSEVTSAVVRQNLRPEIP 294
P+ S +E +V +P
Sbjct: 266 GQTPFYADSTAETYGKIVHYKEHLSLP 292
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 119/293 (40%), Gaps = 54/293 (18%)
Query: 46 EIEP--SKLVIKSVIARGTFGTVHRGL--YDGHDVAVK------LLDWGE--EGHRTEAE 93
E EP S+ + ++ G FG+V+ G+ D VA+K + DWGE G R E
Sbjct: 2 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 61
Query: 94 IAALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLP 153
+ L+ + V LD P + ++ P
Sbjct: 62 VVLLKKVSSGFSGVIRLLD------------------------WFERPDSFVLILERMEP 97
Query: 154 GGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNR-TVK 212
L ++ + R L ++ + + + H+ ++HRD+K EN+L+D NR +K
Sbjct: 98 VQDLFDFITE--RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELK 155
Query: 213 IADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYN-RKCDVYSFGICLWEIYCCDMP 271
+ DFG + T GT Y PE + + Y+ R V+S GI L+++ C D+P
Sbjct: 156 LIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 213
Query: 272 YPDLSFSEVTSAVVRQN--LRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 322
+ E ++R R + C ++++ C P RP +E+
Sbjct: 214 F------EHDEEIIRGQVFFRQRVSSEC----QHLIRWCLALRPSDRPTFEEI 256
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 95/222 (42%), Gaps = 32/222 (14%)
Query: 57 VIARGTFGT--VHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHP 114
++ G+F T + R L + A+K+L E+ H + T+E V +LDHP
Sbjct: 37 ILGEGSFSTTVLARELATSREYAIKIL---EKRHIIKENKVPY---VTRERDVMSRLDHP 90
Query: 115 NVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVV 174
K +L+ + Y G L Y+ R+ +F
Sbjct: 91 FFVKLYFTFQDDEKLYFG----------------LSYAKNGELLKYI----RKIGSFDET 130
Query: 175 VQ--LALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGE 232
++ L YLH + I+HRD+K EN+LL+++ ++I DFG A+V +
Sbjct: 131 CTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 190
Query: 233 --TGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPY 272
GT Y++PE+L + D+++ G ++++ P+
Sbjct: 191 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 121/290 (41%), Gaps = 58/290 (20%)
Query: 50 SKLVIKSVIARGTFGTVHRGL--YDGHDVAVK------LLDWGE--EGHRTEAEIAALR- 98
S+ + ++ G FG+V+ G+ D VA+K + DWGE G R E+ L+
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 99 --SAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGA 156
S F+ + + + P+ I + P + + GA
Sbjct: 64 VSSGFSGVIRLLDWFERPDSFVLI-----------------LERPEPVQDLFDFITERGA 106
Query: 157 LKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNR-TVKIAD 215
L+ L R ++V+ + + H+ ++HRD+K EN+L+D NR +K+ D
Sbjct: 107 LQEELA----RSFFWQVL--------EAVRHCHNXGVLHRDIKDENILIDLNRGELKLID 154
Query: 216 FGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYN-RKCDVYSFGICLWEIYCCDMPYPD 274
FG + T GT Y PE + + Y+ R V+S GI L+++ C D+P+
Sbjct: 155 FGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-- 210
Query: 275 LSFSEVTSAVVRQN--LRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 322
E ++R R + C ++++ C P RP +E+
Sbjct: 211 ----EHDEEIIRGQVFFRQRVSXEC----QHLIRWCLALRPSDRPTFEEI 252
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Query: 189 HSQKIVHRDVKTENMLLD---KNRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLN 245
H +VHR++K EN+LL K VK+ADFG+A G GT GY++PEVL
Sbjct: 127 HQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLR 186
Query: 246 GNPYNRKCDVYSFGICLWEIYCCDMPYPD 274
+PY + D+++ G+ L+ + P+ D
Sbjct: 187 KDPYGKPVDLWACGVILYILLVGYPPFWD 215
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 119/293 (40%), Gaps = 54/293 (18%)
Query: 46 EIEP--SKLVIKSVIARGTFGTVHRGL--YDGHDVAVK------LLDWGE--EGHRTEAE 93
E EP S+ + ++ G FG+V+ G+ D VA+K + DWGE G R E
Sbjct: 3 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 62
Query: 94 IAALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLP 153
+ L+ + V LD P + ++ P
Sbjct: 63 VVLLKKVSSGFSGVIRLLD------------------------WFERPDSFVLILERPEP 98
Query: 154 GGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNR-TVK 212
L ++ + R L ++ + + + H+ ++HRD+K EN+L+D NR +K
Sbjct: 99 VQDLFDFITE--RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELK 156
Query: 213 IADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYN-RKCDVYSFGICLWEIYCCDMP 271
+ DFG + T GT Y PE + + Y+ R V+S GI L+++ C D+P
Sbjct: 157 LIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 214
Query: 272 YPDLSFSEVTSAVVRQN--LRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 322
+ E ++R R + C ++++ C P RP +E+
Sbjct: 215 F------EHDEEIIRGQVFFRQRVSSEC----QHLIRWCLALRPSDRPTFEEI 257
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 70/132 (53%), Gaps = 17/132 (12%)
Query: 147 VVVEYLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLL- 205
+V E L GG++ ++ +++ + ++ D+A L +LH++ I HRD+K EN+L
Sbjct: 88 LVFEKLQGGSILAHI--QKQKHFNEREASRVVRDVAAALDFLHTKGIAHRDLKPENILCE 145
Query: 206 --DKNRTVKIADFGVARVEASNPN-------DMTGETGTLGYMAPEVL-----NGNPYNR 251
+K VKI DF + N + ++T G+ YMAPEV+ Y++
Sbjct: 146 SPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFTDQATFYDK 205
Query: 252 KCDVYSFGICLW 263
+CD++S G+ L+
Sbjct: 206 RCDLWSLGVVLY 217
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 124/296 (41%), Gaps = 60/296 (20%)
Query: 46 EIEP--SKLVIKSVIARGTFGTVHRGL--YDGHDVAVK------LLDWGE--EGHRTEAE 93
E EP S+ + ++ G FG+V+ G+ D VA+K + DWGE G R E
Sbjct: 45 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 104
Query: 94 IAALR---SAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVE 150
+ L+ S F+ + + + P+ I + P + +
Sbjct: 105 VVLLKKVSSGFSGVIRLLDWFERPDSFVLI-----------------LERPEPVQDLFDF 147
Query: 151 YLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNR- 209
GAL+ L R ++V+ + + H+ ++HRD+K EN+L+D NR
Sbjct: 148 ITERGALQEELA----RSFFWQVL--------EAVRHCHNCGVLHRDIKDENILIDLNRG 195
Query: 210 TVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYN-RKCDVYSFGICLWEIYCC 268
+K+ DFG + T GT Y PE + + Y+ R V+S GI L+++ C
Sbjct: 196 ELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 253
Query: 269 DMPYPDLSFSEVTSAVVRQN--LRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 322
D+P+ E ++R R + C ++++ C P RP +E+
Sbjct: 254 DIPF------EHDEEIIRGQVFFRQRVSSEC----QHLIRWCLALRPSDRPTFEEI 299
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 81/160 (50%), Gaps = 13/160 (8%)
Query: 173 VVVQLALDLARGLSYLHSQ-KIVHRDVKTENMLLDKNRTVKIADFGVARVEASN-PNDMT 230
++ ++A+ + + L +LHS+ ++HRDVK N+L++ VK+ DFG++ + D+
Sbjct: 110 ILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDI- 168
Query: 231 GETGTLGYMAPE----VLNGNPYNRKCDVYSFGICLWEIYCCDMPYPD--LSFSEVTSAV 284
+ G YMAPE LN Y+ K D++S GI + E+ PY F ++ V
Sbjct: 169 -DAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVV 227
Query: 285 VRQNLRPEIPRCCPSS-LANVMKRCWDANPDKRPEMDEVV 323
+ P++P S+ + +C N +RP E++
Sbjct: 228 --EEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELM 265
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 119/293 (40%), Gaps = 54/293 (18%)
Query: 46 EIEP--SKLVIKSVIARGTFGTVHRGL--YDGHDVAVK------LLDWGE--EGHRTEAE 93
E EP S+ + ++ G FG+V+ G+ D VA+K + DWGE G R E
Sbjct: 18 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 77
Query: 94 IAALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLP 153
+ L+ + V LD P + ++ P
Sbjct: 78 VVLLKKVSSGFSGVIRLLD------------------------WFERPDSFVLILERPEP 113
Query: 154 GGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNR-TVK 212
L ++ + R L ++ + + + H+ ++HRD+K EN+L+D NR +K
Sbjct: 114 VQDLFDFITE--RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELK 171
Query: 213 IADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYN-RKCDVYSFGICLWEIYCCDMP 271
+ DFG + T GT Y PE + + Y+ R V+S GI L+++ C D+P
Sbjct: 172 LIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 229
Query: 272 YPDLSFSEVTSAVVRQN--LRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 322
+ E ++R R + C ++++ C P RP +E+
Sbjct: 230 F------EHDEEIIRGQVFFRQRVSSEC----QHLIRWCLALRPSDRPTFEEI 272
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 119/293 (40%), Gaps = 54/293 (18%)
Query: 46 EIEP--SKLVIKSVIARGTFGTVHRGL--YDGHDVAVK------LLDWGE--EGHRTEAE 93
E EP S+ + ++ G FG+V+ G+ D VA+K + DWGE G R E
Sbjct: 37 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 96
Query: 94 IAALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLP 153
+ L+ + V LD P + ++ P
Sbjct: 97 VVLLKKVSSGFSGVIRLLD------------------------WFERPDSFVLILERPEP 132
Query: 154 GGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNR-TVK 212
L ++ + R L ++ + + + H+ ++HRD+K EN+L+D NR +K
Sbjct: 133 VQDLFDFITE--RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELK 190
Query: 213 IADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYN-RKCDVYSFGICLWEIYCCDMP 271
+ DFG + T GT Y PE + + Y+ R V+S GI L+++ C D+P
Sbjct: 191 LIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 248
Query: 272 YPDLSFSEVTSAVVRQN--LRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 322
+ E ++R R + C ++++ C P RP +E+
Sbjct: 249 F------EHDEEIIRGQVFFRQRVSSEC----QHLIRWCLALRPSDRPTFEEI 291
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 119/293 (40%), Gaps = 54/293 (18%)
Query: 46 EIEP--SKLVIKSVIARGTFGTVHRGL--YDGHDVAVK------LLDWGE--EGHRTEAE 93
E EP S+ + ++ G FG+V+ G+ D VA+K + DWGE G R E
Sbjct: 50 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 109
Query: 94 IAALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLP 153
+ L+ + V LD P + ++ P
Sbjct: 110 VVLLKKVSSGFSGVIRLLD------------------------WFERPDSFVLILERPEP 145
Query: 154 GGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNR-TVK 212
L ++ + R L ++ + + + H+ ++HRD+K EN+L+D NR +K
Sbjct: 146 VQDLFDFITE--RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELK 203
Query: 213 IADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYN-RKCDVYSFGICLWEIYCCDMP 271
+ DFG + T GT Y PE + + Y+ R V+S GI L+++ C D+P
Sbjct: 204 LIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 261
Query: 272 YPDLSFSEVTSAVVRQN--LRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 322
+ E ++R R + C ++++ C P RP +E+
Sbjct: 262 F------EHDEEIIRGQVFFRQRVSXEC----QHLIRWCLALRPSDRPTFEEI 304
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 119/293 (40%), Gaps = 54/293 (18%)
Query: 46 EIEP--SKLVIKSVIARGTFGTVHRGL--YDGHDVAVK------LLDWGE--EGHRTEAE 93
E EP S+ + ++ G FG+V+ G+ D VA+K + DWGE G R E
Sbjct: 17 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 76
Query: 94 IAALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLP 153
+ L+ + V LD P + ++ P
Sbjct: 77 VVLLKKVSSGFSGVIRLLD------------------------WFERPDSFVLILERPEP 112
Query: 154 GGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNR-TVK 212
L ++ + R L ++ + + + H+ ++HRD+K EN+L+D NR +K
Sbjct: 113 VQDLFDFITE--RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELK 170
Query: 213 IADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYN-RKCDVYSFGICLWEIYCCDMP 271
+ DFG + T GT Y PE + + Y+ R V+S GI L+++ C D+P
Sbjct: 171 LIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 228
Query: 272 YPDLSFSEVTSAVVRQN--LRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 322
+ E ++R R + C ++++ C P RP +E+
Sbjct: 229 F------EHDEEIIRGQVFFRQRVSSEC----QHLIRWCLALRPSDRPTFEEI 271
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 119/293 (40%), Gaps = 54/293 (18%)
Query: 46 EIEP--SKLVIKSVIARGTFGTVHRGL--YDGHDVAVK------LLDWGE--EGHRTEAE 93
E EP S+ + ++ G FG+V+ G+ D VA+K + DWGE G R E
Sbjct: 25 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 84
Query: 94 IAALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLP 153
+ L+ + V LD P + ++ P
Sbjct: 85 VVLLKKVSSGFSGVIRLLD------------------------WFERPDSFVLILERPEP 120
Query: 154 GGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNR-TVK 212
L ++ + R L ++ + + + H+ ++HRD+K EN+L+D NR +K
Sbjct: 121 VQDLFDFITE--RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELK 178
Query: 213 IADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYN-RKCDVYSFGICLWEIYCCDMP 271
+ DFG + T GT Y PE + + Y+ R V+S GI L+++ C D+P
Sbjct: 179 LIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 236
Query: 272 YPDLSFSEVTSAVVRQN--LRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 322
+ E ++R R + C ++++ C P RP +E+
Sbjct: 237 F------EHDEEIIRGQVFFRQRVSXEC----QHLIRWCLALRPSDRPTFEEI 279
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 119/293 (40%), Gaps = 54/293 (18%)
Query: 46 EIEP--SKLVIKSVIARGTFGTVHRGL--YDGHDVAVK------LLDWGE--EGHRTEAE 93
E EP S+ + ++ G FG+V+ G+ D VA+K + DWGE G R E
Sbjct: 18 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 77
Query: 94 IAALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLP 153
+ L+ + V LD P + ++ P
Sbjct: 78 VVLLKKVSSGFSGVIRLLD------------------------WFERPDSFVLILERPEP 113
Query: 154 GGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNR-TVK 212
L ++ + R L ++ + + + H+ ++HRD+K EN+L+D NR +K
Sbjct: 114 VQDLFDFITE--RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELK 171
Query: 213 IADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYN-RKCDVYSFGICLWEIYCCDMP 271
+ DFG + T GT Y PE + + Y+ R V+S GI L+++ C D+P
Sbjct: 172 LIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 229
Query: 272 YPDLSFSEVTSAVVRQN--LRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 322
+ E ++R R + C ++++ C P RP +E+
Sbjct: 230 F------EHDEEIIRGQVFFRQRVSXEC----QHLIRWCLALRPSDRPTFEEI 272
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 124/296 (41%), Gaps = 60/296 (20%)
Query: 46 EIEP--SKLVIKSVIARGTFGTVHRGL--YDGHDVAVK------LLDWGE--EGHRTEAE 93
E EP S+ + ++ G FG+V+ G+ D VA+K + DWGE G R E
Sbjct: 2 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 61
Query: 94 IAALR---SAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVE 150
+ L+ S F+ + + + P+ I + P + +
Sbjct: 62 VVLLKKVSSGFSGVIRLLDWFERPDSFVLI-----------------LERPEPVQDLFDF 104
Query: 151 YLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNR- 209
GAL+ L R ++V+ + + H+ ++HRD+K EN+L+D NR
Sbjct: 105 ITERGALQEELA----RSFFWQVL--------EAVRHCHNCGVLHRDIKDENILIDLNRG 152
Query: 210 TVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYN-RKCDVYSFGICLWEIYCC 268
+K+ DFG + T GT Y PE + + Y+ R V+S GI L+++ C
Sbjct: 153 ELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 210
Query: 269 DMPYPDLSFSEVTSAVVRQN--LRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 322
D+P+ E ++R R + C ++++ C P RP +E+
Sbjct: 211 DIPF------EHDEEIIRGQVFFRQRVSSEC----QHLIRWCLALRPSDRPTFEEI 256
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 124/296 (41%), Gaps = 60/296 (20%)
Query: 46 EIEP--SKLVIKSVIARGTFGTVHRGL--YDGHDVAVK------LLDWGE--EGHRTEAE 93
E EP S+ + ++ G FG+V+ G+ D VA+K + DWGE G R E
Sbjct: 30 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 89
Query: 94 IAALR---SAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVE 150
+ L+ S F+ + + + P+ I + P + +
Sbjct: 90 VVLLKKVSSGFSGVIRLLDWFERPDSFVLI-----------------LERPEPVQDLFDF 132
Query: 151 YLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNR- 209
GAL+ L R ++V+ + + H+ ++HRD+K EN+L+D NR
Sbjct: 133 ITERGALQEELA----RSFFWQVL--------EAVRHCHNCGVLHRDIKDENILIDLNRG 180
Query: 210 TVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYN-RKCDVYSFGICLWEIYCC 268
+K+ DFG + T GT Y PE + + Y+ R V+S GI L+++ C
Sbjct: 181 ELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
Query: 269 DMPYPDLSFSEVTSAVVRQN--LRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 322
D+P+ E ++R R + C ++++ C P RP +E+
Sbjct: 239 DIPF------EHDEEIIRGQVFFRQRVSSEC----QHLIRWCLALRPSDRPTFEEI 284
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 5/97 (5%)
Query: 178 ALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVA-RVEASNPNDMTGETGTL 236
A ++ GL ++H++ +V+RD+K N+LLD++ V+I+D G+A P+ GT
Sbjct: 298 AAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH---ASVGTH 354
Query: 237 GYMAPEVLN-GNPYNRKCDVYSFGICLWEIYCCDMPY 272
GYMAPEVL G Y+ D +S G L+++ P+
Sbjct: 355 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 5/97 (5%)
Query: 178 ALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVA-RVEASNPNDMTGETGTL 236
A ++ GL ++H++ +V+RD+K N+LLD++ V+I+D G+A P+ GT
Sbjct: 298 AAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH---ASVGTH 354
Query: 237 GYMAPEVLN-GNPYNRKCDVYSFGICLWEIYCCDMPY 272
GYMAPEVL G Y+ D +S G L+++ P+
Sbjct: 355 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 119/293 (40%), Gaps = 54/293 (18%)
Query: 46 EIEP--SKLVIKSVIARGTFGTVHRGL--YDGHDVAVK------LLDWGE--EGHRTEAE 93
E EP S+ + ++ G FG+V+ G+ D VA+K + DWGE G R E
Sbjct: 17 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 76
Query: 94 IAALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLP 153
+ L+ + V LD P + ++ P
Sbjct: 77 VVLLKKVSSGFSGVIRLLD------------------------WFERPDSFVLILERPEP 112
Query: 154 GGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNR-TVK 212
L ++ + R L ++ + + + H+ ++HRD+K EN+L+D NR +K
Sbjct: 113 VQDLFDFITE--RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELK 170
Query: 213 IADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYN-RKCDVYSFGICLWEIYCCDMP 271
+ DFG + T GT Y PE + + Y+ R V+S GI L+++ C D+P
Sbjct: 171 LIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 228
Query: 272 YPDLSFSEVTSAVVRQN--LRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 322
+ E ++R R + C ++++ C P RP +E+
Sbjct: 229 F------EHDEEIIRGQVFFRQRVSXEC----QHLIRWCLALRPSDRPTFEEI 271
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 5/97 (5%)
Query: 178 ALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVA-RVEASNPNDMTGETGTL 236
A ++ GL ++H++ +V+RD+K N+LLD++ V+I+D G+A P+ GT
Sbjct: 298 AAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH---ASVGTH 354
Query: 237 GYMAPEVLN-GNPYNRKCDVYSFGICLWEIYCCDMPY 272
GYMAPEVL G Y+ D +S G L+++ P+
Sbjct: 355 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 124/296 (41%), Gaps = 60/296 (20%)
Query: 46 EIEP--SKLVIKSVIARGTFGTVHRGL--YDGHDVAVK------LLDWGE--EGHRTEAE 93
E EP S+ + ++ G FG+V+ G+ D VA+K + DWGE G R E
Sbjct: 45 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 104
Query: 94 IAALR---SAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVE 150
+ L+ S F+ + + + P+ I + P + +
Sbjct: 105 VVLLKKVSSGFSGVIRLLDWFERPDSFVLI-----------------LERPEPVQDLFDF 147
Query: 151 YLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNR- 209
GAL+ L R ++V+ + + H+ ++HRD+K EN+L+D NR
Sbjct: 148 ITERGALQEELA----RSFFWQVL--------EAVRHCHNCGVLHRDIKDENILIDLNRG 195
Query: 210 TVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYN-RKCDVYSFGICLWEIYCC 268
+K+ DFG + T GT Y PE + + Y+ R V+S GI L+++ C
Sbjct: 196 ELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 253
Query: 269 DMPYPDLSFSEVTSAVVRQN--LRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 322
D+P+ E ++R R + C ++++ C P RP +E+
Sbjct: 254 DIPF------EHDEEIIRGQVFFRQRVSXEC----QHLIRWCLALRPSDRPTFEEI 299
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 5/97 (5%)
Query: 178 ALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVA-RVEASNPNDMTGETGTL 236
A ++ GL ++H++ +V+RD+K N+LLD++ V+I+D G+A P+ GT
Sbjct: 297 AAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH---ASVGTH 353
Query: 237 GYMAPEVLN-GNPYNRKCDVYSFGICLWEIYCCDMPY 272
GYMAPEVL G Y+ D +S G L+++ P+
Sbjct: 354 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 390
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 124/296 (41%), Gaps = 60/296 (20%)
Query: 46 EIEP--SKLVIKSVIARGTFGTVHRGL--YDGHDVAVK------LLDWGE--EGHRTEAE 93
E EP S+ + ++ G FG+V+ G+ D VA+K + DWGE G R E
Sbjct: 3 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 62
Query: 94 IAALR---SAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVE 150
+ L+ S F+ + + + P+ I + P + +
Sbjct: 63 VVLLKKVSSGFSGVIRLLDWFERPDSFVLI-----------------LERPEPVQDLFDF 105
Query: 151 YLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNR- 209
GAL+ L R ++V+ + + H+ ++HRD+K EN+L+D NR
Sbjct: 106 ITERGALQEELA----RSFFWQVL--------EAVRHCHNCGVLHRDIKDENILIDLNRG 153
Query: 210 TVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYN-RKCDVYSFGICLWEIYCC 268
+K+ DFG + T GT Y PE + + Y+ R V+S GI L+++ C
Sbjct: 154 ELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 211
Query: 269 DMPYPDLSFSEVTSAVVRQN--LRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 322
D+P+ E ++R R + C ++++ C P RP +E+
Sbjct: 212 DIPF------EHDEEIIRGQVFFRQRVSSEC----QHLIRWCLALRPSDRPTFEEI 257
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 124/296 (41%), Gaps = 60/296 (20%)
Query: 46 EIEP--SKLVIKSVIARGTFGTVHRGL--YDGHDVAVK------LLDWGE--EGHRTEAE 93
E EP S+ + ++ G FG+V+ G+ D VA+K + DWGE G R E
Sbjct: 3 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 62
Query: 94 IAALR---SAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVE 150
+ L+ S F+ + + + P+ I + P + +
Sbjct: 63 VVLLKKVSSGFSGVIRLLDWFERPDSFVLI-----------------LERPEPVQDLFDF 105
Query: 151 YLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNR- 209
GAL+ L R ++V+ + + H+ ++HRD+K EN+L+D NR
Sbjct: 106 ITERGALQEELA----RSFFWQVL--------EAVRHCHNCGVLHRDIKDENILIDLNRG 153
Query: 210 TVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYN-RKCDVYSFGICLWEIYCC 268
+K+ DFG + T GT Y PE + + Y+ R V+S GI L+++ C
Sbjct: 154 ELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 211
Query: 269 DMPYPDLSFSEVTSAVVRQN--LRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 322
D+P+ E ++R R + C ++++ C P RP +E+
Sbjct: 212 DIPF------EHDEEIIRGQVFFRQRVSSEC----QHLIRWCLALRPSDRPTFEEI 257
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 124/296 (41%), Gaps = 60/296 (20%)
Query: 46 EIEP--SKLVIKSVIARGTFGTVHRGL--YDGHDVAVK------LLDWGE--EGHRTEAE 93
E EP S+ + ++ G FG+V+ G+ D VA+K + DWGE G R E
Sbjct: 1 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 60
Query: 94 IAALR---SAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVE 150
+ L+ S F+ + + + P+ I + P + +
Sbjct: 61 VVLLKKVSSGFSGVIRLLDWFERPDSFVLI-----------------LERPEPVQDLFDF 103
Query: 151 YLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNR- 209
GAL+ L R ++V+ + + H+ ++HRD+K EN+L+D NR
Sbjct: 104 ITERGALQEELA----RSFFWQVL--------EAVRHCHNCGVLHRDIKDENILIDLNRG 151
Query: 210 TVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYN-RKCDVYSFGICLWEIYCC 268
+K+ DFG + T GT Y PE + + Y+ R V+S GI L+++ C
Sbjct: 152 ELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 209
Query: 269 DMPYPDLSFSEVTSAVVRQN--LRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 322
D+P+ E ++R R + C ++++ C P RP +E+
Sbjct: 210 DIPF------EHDEEIIRGQVFFRQRVSSEC----QHLIRWCLALRPSDRPTFEEI 255
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 119/293 (40%), Gaps = 54/293 (18%)
Query: 46 EIEP--SKLVIKSVIARGTFGTVHRGL--YDGHDVAVK------LLDWGE--EGHRTEAE 93
E EP S+ + ++ G FG+V+ G+ D VA+K + DWGE G R E
Sbjct: 18 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 77
Query: 94 IAALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLP 153
+ L+ + V LD P + ++ P
Sbjct: 78 VVLLKKVSSGFSGVIRLLD------------------------WFERPDSFVLILERPEP 113
Query: 154 GGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNR-TVK 212
L ++ + R L ++ + + + H+ ++HRD+K EN+L+D NR +K
Sbjct: 114 VQDLFDFITE--RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELK 171
Query: 213 IADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYN-RKCDVYSFGICLWEIYCCDMP 271
+ DFG + T GT Y PE + + Y+ R V+S GI L+++ C D+P
Sbjct: 172 LIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 229
Query: 272 YPDLSFSEVTSAVVRQN--LRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 322
+ E ++R R + C ++++ C P RP +E+
Sbjct: 230 F------EHDEEIIRGQVFFRQRVSXEC----QHLIRWCLALRPXDRPTFEEI 272
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 184 GLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEV 243
G+ +LHS I+HRD+K N+++ + T+KI DFG+AR +N MT T Y APEV
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFM-MTPYVVTRYYRAPEV 196
Query: 244 LNGNPYNRKCDVYSFGICLWEI 265
+ G Y D++S G + E+
Sbjct: 197 ILGMGYAANVDIWSVGCIMGEL 218
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 62/124 (50%), Gaps = 11/124 (8%)
Query: 174 VVQLALDLAR----------GLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEA 223
V+Q+ LD R G+ +LHS I+HRD+K N+++ + T+KI DFG+AR A
Sbjct: 120 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-A 178
Query: 224 SNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSA 283
M T Y APEV+ G Y D++S G + E+ + +P + +
Sbjct: 179 GTSFMMVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK 238
Query: 284 VVRQ 287
V+ Q
Sbjct: 239 VIEQ 242
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 121/290 (41%), Gaps = 58/290 (20%)
Query: 50 SKLVIKSVIARGTFGTVHRGL--YDGHDVAVK------LLDWGE--EGHRTEAEIAALR- 98
S+ + ++ G FG+V+ G+ D VA+K + DWGE G R E+ L+
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 99 --SAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGA 156
S F+ + + + P+ I + P + + GA
Sbjct: 64 VSSGFSGVIRLLDWFERPDSFVLI-----------------LERPEPVQDLFDFITERGA 106
Query: 157 LKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNR-TVKIAD 215
L+ L R ++V+ + + H+ ++HRD+K EN+L+D NR +K+ D
Sbjct: 107 LQEELA----RSFFWQVL--------EAVRHCHNCGVLHRDIKDENILIDLNRGELKLID 154
Query: 216 FGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYN-RKCDVYSFGICLWEIYCCDMPYPD 274
FG + T GT Y PE + + Y+ R V+S GI L+++ C D+P+
Sbjct: 155 FGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-- 210
Query: 275 LSFSEVTSAVVRQN--LRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 322
E ++R R + C ++++ C P RP +E+
Sbjct: 211 ----EHDEEIIRGQVFFRQRVSSEC----QHLIRWCLALRPSDRPTFEEI 252
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 121/294 (41%), Gaps = 56/294 (19%)
Query: 46 EIEP--SKLVIKSVIARGTFGTVHRGL--YDGHDVAVK------LLDWGE--EGHRTEAE 93
E EP S+ + ++ G FG+V+ G+ D VA+K + DWGE G R E
Sbjct: 30 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 89
Query: 94 IAALR---SAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVE 150
+ L+ S F+ + + + P+ I + P + +
Sbjct: 90 VVLLKKVSSGFSGVIRLLDWFERPDSFVLI-----------------LERPEPVQDLFDF 132
Query: 151 YLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNR- 209
GAL+ L R ++V+ + + H+ ++HRD+K EN+L+D NR
Sbjct: 133 ITERGALQEELA----RSFFWQVL--------EAVRHCHNCGVLHRDIKDENILIDLNRG 180
Query: 210 TVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYN-RKCDVYSFGICLWEIYCC 268
+K+ DFG + T GT Y PE + + Y+ R V+S GI L+++ C
Sbjct: 181 ELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
Query: 269 DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 322
D+P+ RQ + S ++++ C P RP +E+
Sbjct: 239 DIPFEHDEEIIGGQVFFRQRVS--------SECQHLIRWCLALRPSDRPTFEEI 284
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 121/294 (41%), Gaps = 56/294 (19%)
Query: 46 EIEP--SKLVIKSVIARGTFGTVHRGL--YDGHDVAVK------LLDWGE--EGHRTEAE 93
E EP S+ + ++ G FG+V+ G+ D VA+K + DWGE G R E
Sbjct: 31 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 90
Query: 94 IAALR---SAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVE 150
+ L+ S F+ + + + P+ I + P + +
Sbjct: 91 VVLLKKVSSGFSGVIRLLDWFERPDSFVLI-----------------LERPEPVQDLFDF 133
Query: 151 YLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNR- 209
GAL+ L R ++V+ + + H+ ++HRD+K EN+L+D NR
Sbjct: 134 ITERGALQEELA----RSFFWQVL--------EAVRHCHNCGVLHRDIKDENILIDLNRG 181
Query: 210 TVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYN-RKCDVYSFGICLWEIYCC 268
+K+ DFG + T GT Y PE + + Y+ R V+S GI L+++ C
Sbjct: 182 ELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
Query: 269 DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 322
D+P+ RQ + S ++++ C P RP +E+
Sbjct: 240 DIPFEHDEEIIGGQVFFRQRVS--------SECQHLIRWCLALRPSDRPTFEEI 285
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 121/294 (41%), Gaps = 56/294 (19%)
Query: 46 EIEP--SKLVIKSVIARGTFGTVHRGL--YDGHDVAVK------LLDWGE--EGHRTEAE 93
E EP S+ + ++ G FG+V+ G+ D VA+K + DWGE G R E
Sbjct: 31 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 90
Query: 94 IAALR---SAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVE 150
+ L+ S F+ + + + P+ I + P + +
Sbjct: 91 VVLLKKVSSGFSGVIRLLDWFERPDSFVLI-----------------LERPEPVQDLFDF 133
Query: 151 YLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNR- 209
GAL+ L R ++V+ + + H+ ++HRD+K EN+L+D NR
Sbjct: 134 ITERGALQEELA----RSFFWQVL--------EAVRHCHNCGVLHRDIKDENILIDLNRG 181
Query: 210 TVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYN-RKCDVYSFGICLWEIYCC 268
+K+ DFG + T GT Y PE + + Y+ R V+S GI L+++ C
Sbjct: 182 ELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
Query: 269 DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 322
D+P+ RQ + S ++++ C P RP +E+
Sbjct: 240 DIPFEHDEEIIGGQVFFRQRVS--------SECQHLIRWCLALRPSDRPTFEEI 285
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 121/294 (41%), Gaps = 56/294 (19%)
Query: 46 EIEP--SKLVIKSVIARGTFGTVHRGL--YDGHDVAVK------LLDWGE--EGHRTEAE 93
E EP S+ + ++ G FG+V+ G+ D VA+K + DWGE G R E
Sbjct: 30 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 89
Query: 94 IAALR---SAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVE 150
+ L+ S F+ + + + P+ I + P + +
Sbjct: 90 VVLLKKVSSGFSGVIRLLDWFERPDSFVLI-----------------LERPEPVQDLFDF 132
Query: 151 YLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNR- 209
GAL+ L R ++V+ + + H+ ++HRD+K EN+L+D NR
Sbjct: 133 ITERGALQEELA----RSFFWQVL--------EAVRHCHNCGVLHRDIKDENILIDLNRG 180
Query: 210 TVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYN-RKCDVYSFGICLWEIYCC 268
+K+ DFG + T GT Y PE + + Y+ R V+S GI L+++ C
Sbjct: 181 ELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
Query: 269 DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 322
D+P+ RQ + S ++++ C P RP +E+
Sbjct: 239 DIPFEHDEEIIGGQVFFRQRVS--------SECQHLIRWCLALRPSDRPTFEEI 284
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 121/294 (41%), Gaps = 56/294 (19%)
Query: 46 EIEP--SKLVIKSVIARGTFGTVHRGL--YDGHDVAVK------LLDWGE--EGHRTEAE 93
E EP S+ + ++ G FG+V+ G+ D VA+K + DWGE G R E
Sbjct: 31 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 90
Query: 94 IAALR---SAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVE 150
+ L+ S F+ + + + P+ I + P + +
Sbjct: 91 VVLLKKVSSGFSGVIRLLDWFERPDSFVLI-----------------LERPEPVQDLFDF 133
Query: 151 YLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNR- 209
GAL+ L R ++V+ + + H+ ++HRD+K EN+L+D NR
Sbjct: 134 ITERGALQEELA----RSFFWQVL--------EAVRHCHNCGVLHRDIKDENILIDLNRG 181
Query: 210 TVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYN-RKCDVYSFGICLWEIYCC 268
+K+ DFG + T GT Y PE + + Y+ R V+S GI L+++ C
Sbjct: 182 ELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
Query: 269 DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 322
D+P+ RQ + E ++++ C P RP +E+
Sbjct: 240 DIPFEHDEEIIGGQVFFRQRVSXEC--------QHLIRWCLALRPSDRPTFEEI 285
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 121/294 (41%), Gaps = 56/294 (19%)
Query: 46 EIEP--SKLVIKSVIARGTFGTVHRGL--YDGHDVAVK------LLDWGE--EGHRTEAE 93
E EP S+ + ++ G FG+V+ G+ D VA+K + DWGE G R E
Sbjct: 30 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 89
Query: 94 IAALR---SAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVE 150
+ L+ S F+ + + + P+ I + P + +
Sbjct: 90 VVLLKKVSSGFSGVIRLLDWFERPDSFVLI-----------------LERPEPVQDLFDF 132
Query: 151 YLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNR- 209
GAL+ L R ++V+ + + H+ ++HRD+K EN+L+D NR
Sbjct: 133 ITERGALQEELA----RSFFWQVL--------EAVRHCHNCGVLHRDIKDENILIDLNRG 180
Query: 210 TVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYN-RKCDVYSFGICLWEIYCC 268
+K+ DFG + T GT Y PE + + Y+ R V+S GI L+++ C
Sbjct: 181 ELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
Query: 269 DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 322
D+P+ RQ + E ++++ C P RP +E+
Sbjct: 239 DIPFEHDEEIIGGQVFFRQRVSXEC--------QHLIRWCLALRPSDRPTFEEI 284
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 104/221 (47%), Gaps = 33/221 (14%)
Query: 57 VIARGTFGTVHR--GLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHP 114
++ G FG VH+ G +A K++ G + + E+ E++V ++LDH
Sbjct: 96 ILGGGRFGQVHKCEETATGLKLAAKIIK--TRGMKDKEEV-------KNEISVMNQLDHA 146
Query: 115 NVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVV 174
N+ + A +++ +V+EY+ GG L +I +
Sbjct: 147 NLIQLYDAFESKNDI----------------VLVMEYVDGGELFDRIIDESYNLTELDTI 190
Query: 175 VQLALDLARGLSYLHSQKIVHRDVKTENML-LDKN-RTVKIADFGVARVEASNPND-MTG 231
+ + + G+ ++H I+H D+K EN+L ++++ + +KI DFG+AR P + +
Sbjct: 191 LFMK-QICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLAR--RYKPREKLKV 247
Query: 232 ETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPY 272
GT ++APEV+N + + D++S G+ + + P+
Sbjct: 248 NFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPF 288
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 121/294 (41%), Gaps = 56/294 (19%)
Query: 46 EIEP--SKLVIKSVIARGTFGTVHRGL--YDGHDVAVK------LLDWGE--EGHRTEAE 93
E EP S+ + ++ G FG+V+ G+ D VA+K + DWGE G R E
Sbjct: 31 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 90
Query: 94 IAALR---SAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVE 150
+ L+ S F+ + + + P+ I + P + +
Sbjct: 91 VVLLKKVSSGFSGVIRLLDWFERPDSFVLI-----------------LERPEPVQDLFDF 133
Query: 151 YLPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNR- 209
GAL+ L R ++V+ + + H+ ++HRD+K EN+L+D NR
Sbjct: 134 ITERGALQEELA----RSFFWQVL--------EAVRHCHNCGVLHRDIKDENILIDLNRG 181
Query: 210 TVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYN-RKCDVYSFGICLWEIYCC 268
+K+ DFG + T GT Y PE + + Y+ R V+S GI L+++ C
Sbjct: 182 ELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
Query: 269 DMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 322
D+P+ RQ + E ++++ C P RP +E+
Sbjct: 240 DIPFEHDEEIIGGQVFFRQRVSXEC--------QHLIRWCLALRPSDRPTFEEI 285
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 57/102 (55%), Gaps = 4/102 (3%)
Query: 165 RRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARVEAS 224
+ KL + L + +GL Y+H+ I+HRD+K N+ ++++ +KI DFG+AR S
Sbjct: 121 KHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADS 180
Query: 225 NPNDMTGETGTLGYMAPEV-LNGNPYNRKCDVYSFGICLWEI 265
+M G T Y APEV LN Y + D++S G + E+
Sbjct: 181 ---EMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEM 219
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 118/288 (40%), Gaps = 54/288 (18%)
Query: 50 SKLVIKSVIARGTFGTVHRGL--YDGHDVAVK------LLDWGE--EGHRTEAEIAALR- 98
S+ + ++ G FG+V+ G+ D VA+K + DWGE G R E+ L+
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 99 --SAFTQEVAVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGA 156
S F+ + + + P+ I + P + + GA
Sbjct: 64 VSSGFSGVIRLLDWFERPDSFVLI-----------------LERPEPVQDLFDFITERGA 106
Query: 157 LKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNR-TVKIAD 215
L+ L R ++V+ + + H+ ++HRD+K EN+L+D NR +K+ D
Sbjct: 107 LQEELA----RSFFWQVL--------EAVRHCHNCGVLHRDIKDENILIDLNRGELKLID 154
Query: 216 FGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYN-RKCDVYSFGICLWEIYCCDMPYPD 274
FG + T GT Y PE + + Y+ R V+S GI L+++ C D+P+
Sbjct: 155 FGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 212
Query: 275 LSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEV 322
RQ + S ++++ C P RP +E+
Sbjct: 213 DEEIIGGQVFFRQRVS--------SECQHLIRWCLALRPSDRPTFEEI 252
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 105/226 (46%), Gaps = 29/226 (12%)
Query: 48 EPSKLVIKSVIARGTFGTVHRGL--YDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEV 105
E + ++ + +GTFGTV G G VA+K + E +I Q++
Sbjct: 21 EMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQI-------MQDL 73
Query: 106 AVWHKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNR 165
AV H HPN+ + S + E + + N VV+EY+P + R
Sbjct: 74 AVLH---HPNIVQL------QSYFYTLGERDRRDIYLN---VVMEYVPDTLHRCCRNYYR 121
Query: 166 RRKLAFKVVVQLAL-DLARGLSYLH--SQKIVHRDVKTENMLLDK-NRTVKIADFGVA-R 220
R+ +++++ L L R + LH S + HRD+K N+L+++ + T+K+ DFG A +
Sbjct: 122 RQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKK 181
Query: 221 VEASNPNDMTGETGTLGYMAPEVLNGNP-YNRKCDVYSFGICLWEI 265
+ S PN + Y APE++ GN Y D++S G E+
Sbjct: 182 LSPSEPN--VAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEM 225
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 95/224 (42%), Gaps = 33/224 (14%)
Query: 54 IKSVIARGTFGTVHR--GLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKL 111
I + G FG VHR G++ A K + H ++ E +E+ L
Sbjct: 161 IHEELGTGAFGVVHRVTERATGNNFAAKFV---MTPHESDKETV------RKEIQTMSVL 211
Query: 112 DHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAF 171
HP + LH E+ N ++ E++ GG L + + K++
Sbjct: 212 RHPTLVN----------LHDAFED------DNEMVMIYEFMSGGELFE-KVADEHNKMSE 254
Query: 172 KVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRT--VKIADFGV-ARVEASNPND 228
V+ + +GL ++H VH D+K EN++ R+ +K+ DFG+ A ++
Sbjct: 255 DEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK 314
Query: 229 MTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPY 272
+T TGT + APEV G P D++S G+ + + P+
Sbjct: 315 VT--TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPF 356
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 95/224 (42%), Gaps = 33/224 (14%)
Query: 54 IKSVIARGTFGTVHR--GLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKL 111
I + G FG VHR G++ A K + H ++ E +E+ L
Sbjct: 55 IHEELGTGAFGVVHRVTERATGNNFAAKFV---MTPHESDKETVR------KEIQTMSVL 105
Query: 112 DHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAF 171
HP + LH E+ N ++ E++ GG L + + K++
Sbjct: 106 RHPTLVN----------LHDAFED------DNEMVMIYEFMSGGELFE-KVADEHNKMSE 148
Query: 172 KVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRT--VKIADFGV-ARVEASNPND 228
V+ + +GL ++H VH D+K EN++ R+ +K+ DFG+ A ++
Sbjct: 149 DEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK 208
Query: 229 MTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPY 272
+T TGT + APEV G P D++S G+ + + P+
Sbjct: 209 VT--TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPF 250
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 52/95 (54%), Gaps = 11/95 (11%)
Query: 183 RGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARV------EASNP----NDMTGE 232
R + LH ++HRD+K N+L++ N +K+ DFG+AR+ + S P + MT
Sbjct: 123 RAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEX 182
Query: 233 TGTLGYMAPEV-LNGNPYNRKCDVYSFGICLWEIY 266
T Y APEV L Y+R DV+S G L E++
Sbjct: 183 VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 99/214 (46%), Gaps = 30/214 (14%)
Query: 57 VIARGTFGTVHRG-LYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPN 115
VI G+FG V + L + +VA+K ++ + +E+ + + HPN
Sbjct: 47 VIGNGSFGVVFQAKLVESDEVAIK-------------KVLQDKRFKNRELQIMRIVKHPN 93
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVV 175
V + + + +V + +V+EY+P + + ++ +++
Sbjct: 94 VVDLKAFFYSNGD-----KKDEVFL-----NLVLEYVPETVYRASRHYAKLKQTMPMLLI 143
Query: 176 QLAL-DLARGLSYLHSQKIVHRDVKTENMLLDKNRTV-KIADFGVARVE-ASNPNDMTGE 232
+L + L R L+Y+HS I HRD+K +N+LLD V K+ DFG A++ A PN
Sbjct: 144 KLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPN--VSX 201
Query: 233 TGTLGYMAPEVLNG-NPYNRKCDVYSFGICLWEI 265
+ Y APE++ G Y D++S G + E+
Sbjct: 202 ICSRYYRAPELIFGATNYTTNIDIWSTGCVMAEL 235
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 52/95 (54%), Gaps = 11/95 (11%)
Query: 183 RGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARV------EASNP----NDMTGE 232
R + LH ++HRD+K N+L++ N +K+ DFG+AR+ + S P + MT
Sbjct: 123 RAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEY 182
Query: 233 TGTLGYMAPEV-LNGNPYNRKCDVYSFGICLWEIY 266
T Y APEV L Y+R DV+S G L E++
Sbjct: 183 VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 88/209 (42%), Gaps = 33/209 (15%)
Query: 58 IARGTFGTVHRGLYD--GHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPN 115
+ G FG VHR + G K ++ + E+++ ++L HP
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFIN---------TPYPLDKYTVKNEISIMNQLHHPK 109
Query: 116 VTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFKVVV 175
+ A E+ +++E+L GG L I K++ V+
Sbjct: 110 LINLHDAFEDKYEM----------------VLILEFLSGGELFD-RIAAEDYKMSEAEVI 152
Query: 176 QLALDLARGLSYLHSQKIVHRDVKTENMLLD--KNRTVKIADFGVARVEASNPNDMTG-E 232
GL ++H IVH D+K EN++ + K +VKI DFG+A NP+++
Sbjct: 153 NYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLAT--KLNPDEIVKVT 210
Query: 233 TGTLGYMAPEVLNGNPYNRKCDVYSFGIC 261
T T + APE+++ P D+++ G+
Sbjct: 211 TATAEFAAPEIVDREPVGFYTDMWAIGVL 239
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 101/235 (42%), Gaps = 46/235 (19%)
Query: 50 SKLVIKSVIARGTFGTVHRGLYD--GHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAV 107
S +KS++ G +G V + G VA+K ++ + + ALR+ +E+ +
Sbjct: 11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIE------PFDKPLFALRT--LREIKI 62
Query: 108 WHKLDHPNVTKFIGATMGSS-----ELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLI 162
H N+ S E++I E Q + I + L ++ ++
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVIS---TQMLSDDHIQYFIY 119
Query: 163 KNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKNRTVKIADFGVARV- 221
+ R + LH ++HRD+K N+L++ N +K+ DFG+AR+
Sbjct: 120 QT-----------------LRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARII 162
Query: 222 --EASNPNDMTGE-------TGTLGYMAPEV-LNGNPYNRKCDVYSFGICLWEIY 266
A++ ++ TG+ T Y APEV L Y+R DV+S G L E++
Sbjct: 163 DESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 134/302 (44%), Gaps = 58/302 (19%)
Query: 52 LVIKSVIARGTFGTV-HRGLYDGHDVAVK--LLDWGEEGHRTEAEIAALRSAFTQEVAVW 108
+V + ++ G+ GTV +G + G VAVK L+D+ +IA + E
Sbjct: 35 VVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF--------CDIALMEIKLLTESD-- 84
Query: 109 HKLDHPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRK 168
DHPNV ++ + L+I E +C + ++ L +++ + + K
Sbjct: 85 ---DHPNVIRYYCSETTDRFLYIALE---------LCNLNLQDL----VESKNVSDENLK 128
Query: 169 LAFKV-VVQLALDLARGLSYLHSQKIVHRDVKTENMLLD-------------KNRTVKIA 214
L + + L +A G+++LHS KI+HRD+K +N+L+ +N + I+
Sbjct: 129 LQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILIS 188
Query: 215 DFGVARVEASNP----NDMTGETGTLGYMAPEVLNGNP---YNRKCDVYSFGICLWEIYC 267
DFG+ + S ++ +GT G+ APE+L + R D++S G + I
Sbjct: 189 DFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS 248
Query: 268 -CDMPYPDLSFSEVTSAVVRQNLRPEIPRCCP-----SSLANVMKRCWDANPDKRPEMDE 321
P+ D E S ++R + +C + +++ + D +P KRP +
Sbjct: 249 KGKHPFGDKYSRE--SNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMK 306
Query: 322 VV 323
V+
Sbjct: 307 VL 308
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 99/225 (44%), Gaps = 45/225 (20%)
Query: 55 KSVIARGTFGT-VHRGLYDGHDVAVKLLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLD- 112
K V+ G GT V+RG++D DVAVK + + S +EV + + D
Sbjct: 29 KDVLGHGAEGTIVYRGMFDNRDVAVKRI------------LPECFSFADREVQLLRESDE 76
Query: 113 HPNVTKFIGATMGSSELHIQTENGQVAMPSNICCVVVEYLPGGALKTYLIKNRRRKLAFK 172
HPNV ++ +I E L L+ Y+ + L +
Sbjct: 77 HPNVIRYFCTEKDRQFQYIAIE-----------------LCAATLQEYVEQKDFAHLGLE 119
Query: 173 VVVQLALDLARGLSYLHSQKIVHRDVKTENMLL---DKNRTVK--IADFGVARVEASNPN 227
+ L GL++LHS IVHRD+K N+L+ + + +K I+DFG+ + A +
Sbjct: 120 PITLLQ-QTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRH 178
Query: 228 DM---TGETGTLGYMAPEVLN----GNPYNRKCDVYSFGICLWEI 265
+G GT G++APE+L+ NP D++S G + +
Sbjct: 179 SFSRRSGVPGTEGWIAPEMLSEDCKENP-TYTVDIFSAGCVFYYV 222
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,348,296
Number of Sequences: 62578
Number of extensions: 423206
Number of successful extensions: 3839
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1086
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 696
Number of HSP's gapped (non-prelim): 1142
length of query: 355
length of database: 14,973,337
effective HSP length: 100
effective length of query: 255
effective length of database: 8,715,537
effective search space: 2222461935
effective search space used: 2222461935
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)