Query 018490
Match_columns 355
No_of_seqs 350 out of 2333
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 16:04:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018490.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018490hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rpc_A Possible metal-dependen 100.0 2.5E-39 8.5E-44 300.7 22.8 244 78-348 4-264 (264)
2 2wyl_A L-ascorbate-6-phosphate 100.0 5.4E-33 1.9E-37 269.2 27.8 259 73-353 32-328 (360)
3 3kl7_A Putative metal-dependen 100.0 5.2E-33 1.8E-37 254.1 22.4 194 75-331 26-225 (235)
4 3bv6_A Metal-dependent hydrola 100.0 1.2E-32 4.1E-37 268.6 26.1 258 73-352 56-352 (379)
5 1vjn_A Zn-dependent hydrolase 99.9 1.9E-24 6.5E-29 195.4 17.0 180 77-330 11-195 (220)
6 1zkp_A Hypothetical protein BA 99.9 4.2E-23 1.4E-27 191.0 22.8 217 76-347 22-267 (268)
7 3zwf_A Zinc phosphodiesterase 99.9 1.2E-23 4E-28 204.3 19.2 238 79-351 1-360 (368)
8 1y44_A Ribonuclease Z; zinc-de 99.9 9.6E-23 3.3E-27 193.4 20.5 224 79-351 1-307 (320)
9 2cbn_A Ribonuclease Z; phospho 99.9 3E-22 1E-26 188.5 17.6 219 79-348 2-306 (306)
10 3md7_A Beta-lactamase-like; ss 99.9 5.2E-21 1.8E-25 179.7 16.9 212 74-349 24-292 (293)
11 3g1p_A Protein PHNP; C-P lyase 99.9 1.6E-20 5.4E-25 173.1 17.8 176 85-304 38-225 (258)
12 2e7y_A TRNAse Z; tRNA maturati 99.8 4.4E-20 1.5E-24 171.0 16.2 217 84-348 8-280 (280)
13 3jxp_A Coenzyme PQQ synthesis 99.8 3.3E-19 1.1E-23 169.8 13.1 225 85-350 40-307 (321)
14 2ycb_A Beta-CAsp RNAse, cleava 99.7 1.4E-17 4.7E-22 172.3 9.6 254 7-302 106-417 (636)
15 3iek_A Ribonuclease TTHA0252; 99.7 1.3E-15 4.3E-20 150.7 17.1 188 79-302 1-224 (431)
16 2xr1_A Cleavage and polyadenyl 99.7 1E-16 3.5E-21 165.8 9.5 253 7-302 110-420 (640)
17 2az4_A Hypothetical protein EF 99.6 7.4E-15 2.5E-19 144.8 20.2 209 77-303 5-261 (429)
18 2i7t_A Cleavage and polyadenyl 99.6 1.3E-14 4.3E-19 144.5 18.2 188 76-301 9-241 (459)
19 3af5_A Putative uncharacterize 99.6 5.2E-15 1.8E-19 153.4 12.2 224 7-269 115-394 (651)
20 3zq4_A Ribonuclease J 1, RNAse 99.6 5.2E-14 1.8E-18 143.2 19.3 195 76-300 6-230 (555)
21 3bk2_A RNAse J, metal dependen 99.6 1.6E-14 5.6E-19 147.2 15.4 197 76-303 14-248 (562)
22 2i7x_A Protein CFT2; polyadeny 99.5 2E-13 7E-18 142.5 14.3 184 85-303 14-251 (717)
23 3m8t_A 'BLR6230 protein; subcl 99.5 1.4E-13 4.7E-18 128.2 11.5 178 83-306 52-247 (294)
24 4ax1_B Metallo-beta-lactamase 99.4 2.7E-13 9.1E-18 126.5 10.1 180 84-306 56-255 (303)
25 4b87_A DNA cross-LINK repair 1 99.4 2.6E-13 9E-18 131.2 10.3 163 143-339 50-227 (367)
26 3hnn_A Putative diflavin flavo 99.4 3.5E-13 1.2E-17 124.1 9.7 179 87-305 44-235 (262)
27 3l6n_A Metallo-beta-lactamase; 99.4 5.3E-12 1.8E-16 112.4 13.0 171 83-305 28-204 (219)
28 2bib_A CBPE, teichoic acid pho 99.3 9.4E-12 3.2E-16 126.4 14.8 225 76-339 3-279 (547)
29 2r2d_A AGR_PTI_140P, Zn-depend 99.3 3.1E-11 1.1E-15 111.2 14.4 149 80-254 37-219 (276)
30 1m2x_A Class B carbapenemase B 99.3 1.5E-11 5.2E-16 110.0 11.6 171 83-305 24-200 (223)
31 3esh_A Protein similar to meta 99.3 9.6E-12 3.3E-16 115.4 10.4 186 81-306 43-256 (280)
32 3zdk_A 5' exonuclease apollo; 99.3 9.1E-11 3.1E-15 112.1 16.8 133 144-291 24-168 (336)
33 3adr_A Putative uncharacterize 99.3 5.4E-11 1.9E-15 108.6 14.3 161 87-305 21-211 (261)
34 4efz_A Metallo-beta-lactamase 99.2 5.1E-11 1.7E-15 111.7 13.0 186 76-302 2-217 (298)
35 1p9e_A Methyl parathion hydrol 99.2 1.3E-11 4.3E-16 117.7 8.2 176 84-303 95-304 (331)
36 1k07_A FEZ-1 beta-lactamase; m 99.2 4.6E-11 1.6E-15 109.5 11.7 177 85-306 24-220 (263)
37 4ad9_A Lactb2, beta-lactamase- 99.2 3.8E-11 1.3E-15 111.8 10.8 170 83-306 29-205 (289)
38 2xf4_A Hydroxyacylglutathione 99.2 5.8E-12 2E-16 111.5 4.6 166 81-305 8-196 (210)
39 1e5d_A Rubredoxin\:oxygen oxid 99.2 2.3E-11 7.7E-16 118.3 8.5 178 85-306 34-231 (402)
40 2ohh_A Type A flavoprotein FPR 99.2 1.4E-10 4.9E-15 112.7 13.2 184 87-306 36-238 (404)
41 2zwr_A Metallo-beta-lactamase 99.2 2.9E-11 1E-15 107.0 7.5 164 83-305 10-188 (207)
42 1a7t_A Metallo-beta-lactamase; 99.2 4.9E-11 1.7E-15 107.4 9.0 171 84-306 35-211 (232)
43 1ycg_A Nitric oxide reductase; 99.2 1.8E-10 6.3E-15 111.7 13.4 177 86-306 36-232 (398)
44 4dik_A Flavoprotein; TM0755, e 99.2 1.8E-10 6.1E-15 112.9 13.2 181 87-305 53-244 (410)
45 3dha_A N-acyl homoserine lacto 99.2 1.1E-10 3.7E-15 106.4 10.4 146 81-254 34-201 (254)
46 2q9u_A A-type flavoprotein; fl 99.1 1.1E-10 3.8E-15 114.0 10.6 180 86-306 41-235 (414)
47 2zo4_A Metallo-beta-lactamase 99.1 2.2E-10 7.5E-15 107.7 12.0 176 85-306 21-238 (317)
48 2vw8_A PA1000, PQSE; quinolone 99.1 5E-10 1.7E-14 104.8 13.3 174 85-305 23-227 (303)
49 2gcu_A Putative hydroxyacylglu 99.1 6.8E-10 2.3E-14 101.3 13.4 161 85-304 14-186 (245)
50 1mqo_A Beta-lactamase II; alph 99.1 7.1E-11 2.4E-15 105.9 6.6 170 84-305 39-214 (227)
51 1sml_A Protein (penicillinase) 99.1 6E-10 2.1E-14 102.4 12.5 180 81-306 30-230 (269)
52 4hl2_A Beta-lactamase NDM-1; s 99.1 1.2E-10 4E-15 105.5 6.3 169 83-304 45-226 (243)
53 3aj3_A MLR6805 protein, 4-pyri 99.1 7.9E-10 2.7E-14 101.7 11.8 146 81-254 30-213 (274)
54 2p4z_A Metal-dependent hydrola 99.1 3E-10 1E-14 105.8 8.8 205 86-348 33-284 (284)
55 2qed_A Hydroxyacylglutathione 99.0 8.7E-10 3E-14 101.3 11.3 161 76-304 5-175 (258)
56 3tp9_A Beta-lactamase and rhod 99.0 5.5E-10 1.9E-14 111.3 10.4 138 78-253 3-154 (474)
57 3iog_A Beta-lactamase; hydrola 99.0 1.5E-10 5.1E-15 103.3 5.1 167 83-306 20-209 (227)
58 1xm8_A Glyoxalase II; structur 99.0 4.7E-10 1.6E-14 102.9 8.4 156 83-304 8-172 (254)
59 3r2u_A Metallo-beta-lactamase 99.0 1.2E-09 4.2E-14 108.7 12.0 176 84-302 35-220 (466)
60 1ztc_A Hypothetical protein TM 99.0 4.7E-10 1.6E-14 100.4 8.0 132 84-253 33-179 (221)
61 1jjt_A IMP-1 metallo beta-lact 99.0 3.8E-10 1.3E-14 101.3 7.2 168 83-306 30-202 (228)
62 3q6v_A Beta-lactamase; metallo 99.0 3.3E-10 1.1E-14 101.5 6.5 166 84-306 24-216 (233)
63 2y8b_A Metallo-B-lactamase; hy 99.0 8E-10 2.7E-14 101.7 8.1 170 83-305 65-243 (265)
64 2p18_A Glyoxalase II; metallop 99.0 2.1E-09 7.1E-14 101.5 10.9 91 144-253 84-185 (311)
65 2p97_A Hypothetical protein; p 99.0 2.8E-09 9.4E-14 93.9 10.1 160 84-305 22-185 (201)
66 2fhx_A SPM-1; metallo-beta-lac 98.9 1.5E-09 5.3E-14 98.0 5.8 166 85-305 29-225 (246)
67 1qh5_A Glyoxalase II, protein 98.9 6E-09 2.1E-13 95.8 9.4 123 86-252 12-138 (260)
68 4eyb_A Beta-lactamase NDM-1; m 98.7 4.1E-08 1.4E-12 90.5 8.5 79 85-188 74-152 (270)
69 2cfu_A SDSA1; SDS-hydrolase, l 98.4 3.7E-07 1.3E-11 94.6 9.0 76 86-183 123-202 (658)
70 3h3e_A Uncharacterized protein 98.3 1.8E-05 6.2E-10 72.8 14.7 168 146-349 63-266 (267)
71 2yhe_A SEC-alkyl sulfatase; hy 97.3 5.3E-07 1.8E-11 93.3 0.0 74 86-181 133-210 (668)
72 3bk2_A RNAse J, metal dependen 80.5 2.2 7.7E-05 42.8 6.1 63 275-351 379-442 (562)
73 2i7t_A Cleavage and polyadenyl 77.7 2.4 8.3E-05 41.1 5.2 60 276-349 393-457 (459)
74 3af5_A Putative uncharacterize 74.1 3.4 0.00011 42.3 5.3 58 276-348 591-650 (651)
75 2ycb_A Beta-CAsp RNAse, cleava 73.9 3.2 0.00011 42.3 5.1 58 276-348 576-635 (636)
76 3zq4_A Ribonuclease J 1, RNAse 73.8 2.7 9.1E-05 42.2 4.4 62 275-350 364-426 (555)
77 2xr1_A Cleavage and polyadenyl 71.8 3.7 0.00012 41.9 5.0 58 276-348 580-639 (640)
78 2az4_A Hypothetical protein EF 70.3 6.9 0.00024 37.3 6.4 51 276-348 379-429 (429)
79 3iek_A Ribonuclease TTHA0252; 49.5 18 0.00061 34.7 5.1 55 276-348 377-431 (431)
80 3zdk_A 5' exonuclease apollo; 44.4 13 0.00046 34.5 3.2 29 278-306 276-304 (336)
81 4b87_A DNA cross-LINK repair 1 24.6 48 0.0016 31.1 3.4 26 278-303 320-345 (367)
82 3kf6_B Protein TEN1; OB fold, 23.4 1.8E+02 0.0062 22.1 5.7 27 76-102 19-51 (105)
No 1
>3rpc_A Possible metal-dependent hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.49A {Veillonella parvula}
Probab=100.00 E-value=2.5e-39 Score=300.66 Aligned_cols=244 Identities=13% Similarity=0.217 Sum_probs=186.6
Q ss_pred ceEEEEecCcEEEEEeCCeEEEEccccCCCCCCCcccccccCccccchhhhhhhccccCCCCCCCC-CcCEEEecCCCCC
Q 018490 78 VFKLTYLEGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQIVLIGMKTLVQLSDLP-QVDCLLITQSLDD 156 (355)
Q Consensus 78 ~~~itwlGhss~li~~~g~~iLiDP~~sg~~~~p~~~~~~g~~~r~~~~~~~~~g~~~~~~~~~lp-~iD~VlISH~H~D 156 (355)
.|+|||+||||++|+.+|++|||||++++++++ .++......++..+.. +.++++++++ ++|+|||||.|+|
T Consensus 4 ~m~it~lGha~~li~~~g~~iLiDp~~s~~~~~-~~~~~~~~~~~~~~~~------~~~~~~~~l~~~id~iliTH~H~D 76 (264)
T 3rpc_A 4 MTQYTHIRNATGKLTIKNTTFLIDPFLAPKDTY-PGFEGTFNYQQRMPMV------DLPLSMDDLLSNVTAVVVTHTHLD 76 (264)
T ss_dssp CCEEEEEETTEEEEEETTEEEEESCCCCCTTCB-CCCTTBTTTTSCBSSS------CCSSCHHHHHTTCCEEECSCCCGG
T ss_pred eEEEEEEeCcEEEEEECCEEEEeCcccCCCcCc-cCCCCcccccccCCCC------CCCCCHHHccccCCEEEECCCchh
Confidence 589999999999999999999999999986652 2232110001101110 1245566665 8999999999999
Q ss_pred CCChhhHHHhhhcCCCceEEEc-CChHHHHhhcC-CceEEcCCCceEEeCcccCCceEEEEEecCccCCC-C--------
Q 018490 157 HCHLKTLKPLSKMSPNLKVIAT-PNAKTLLDPLF-QNVTYVEPGQSSEIEGRNGSKLRVKATAGPVLGPP-W-------- 225 (355)
Q Consensus 157 Hld~~tl~~l~~~~~~~~v~~~-~~~~~~l~~~~-~~v~~l~~~e~~~l~~~~~~~l~i~~~pa~~~g~~-~-------- 225 (355)
|++..++..+. .++++|++ +....++++++ .++.++ +++++++ +++|+++|++|+... +
T Consensus 77 H~~~~~~~~~~---~~~~v~~~~~~~~~~l~~~g~~~~~~~--~~~~~~~-----~~~i~~~pa~H~~~~~~~~p~~~~~ 146 (264)
T 3rpc_A 77 HWDDTAINSIP---KSLPIFVQNTADKELITSQGFIDVRII--FESLEFN-----GITLRKTGGSHGTVEMYANPVLAPL 146 (264)
T ss_dssp GSCHHHHHHSC---TTSCEEESSHHHHHHHHHTTCSCEEEC--SSEEEET-----TEEEEEECCCSSCHHHHTSTTHHHH
T ss_pred hCCCHHHHhhc---cCCeEEEeCHHHHHHHHhcCCCeeEEe--cccEEEC-----CEEEEEeccccCCcccccccccccc
Confidence 98755544443 37899998 55666888886 456665 5789997 899999999986321 0
Q ss_pred CCCccEEEEEecCCceeEEEcCCCCCCccccccc---CCcEEEEccccccCCCc--eeccCHHHHHHHHHHcCCCEEEEe
Q 018490 226 QRPENGYLVNSSQGQLTLYYEPHCVYNQNFLEKE---RSDIIITPVIKQLLPKF--TLVSGQEDAVKLAKLLHAKFIVPM 300 (355)
Q Consensus 226 ~~~~~g~~i~~~~~~~~i~~sGDt~~~~~~~~~~---~~Dl~~l~~g~~~~~~~--~~h~~~~ea~~~~~~l~~k~~ip~ 300 (355)
...|+||+|+.++ +.+|||+|||+|.+++.++. ++|++++|+|++..+++ ..||+++||+++++.+++|++||+
T Consensus 147 ~~~~~g~~i~~~~-~~~i~~~GDt~~~~~~~~~~~~~~~Dv~il~~g~~~~~~~~~~~hm~~~ea~~~~~~l~~~~vi~~ 225 (264)
T 3rpc_A 147 AGDAMGVIFEAAD-EPTVYLVGDTVWTSDVEKALLRFDPNVIIMNTGYAQILGFEDSIIMGTKDIGRMVVRKPEAKIIAV 225 (264)
T ss_dssp HCCCCEEEEECTT-SCCEEECCSCCSCHHHHHHHHHHCCSEEEEECSCBCBTTCSSCSSCCHHHHHHHHHHCTTSEEEEE
T ss_pred ccccEEEEEEeCC-ccEEEEECCcCchHHHHHHHHHhCCCEEEEecCccccccccCCcccCHHHHHHHHHhCCcCeEEEE
Confidence 1247899999863 47999999999999877643 79999999986322222 469999999999999999999999
Q ss_pred ccCCccccccccccccccCCHHHHHHHHHhcCCCCeEeccCCCCeEEc
Q 018490 301 KNGDLDSKGFLASIIQSEGTVESFKELLSKELPDAQLLEPTPGEPLEI 348 (355)
Q Consensus 301 H~~~f~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~Ge~~~l 348 (355)
||++|. .+.++.+++++.+++.+.+.++.+|++||+++|
T Consensus 226 H~~~~~---------~~~~~~~~l~~~~~~~g~~~~~~~~~~Ge~~~l 264 (264)
T 3rpc_A 226 HMDTVN---------HTATSRKDVRKFIKGNNIESHVAVPEDGETITL 264 (264)
T ss_dssp SCSSST---------TBCSCHHHHHHHHHHTTCTTTEECCCTTCEEEC
T ss_pred cccccc---------ccccCHHHHHHHHHHcCCCCcEEecCCCCEEeC
Confidence 999987 257899999999988655568999999999975
No 2
>2wyl_A L-ascorbate-6-phosphate lactonase ULAG; hydrolase; 2.59A {Escherichia coli} PDB: 2wym_A*
Probab=100.00 E-value=5.4e-33 Score=269.20 Aligned_cols=259 Identities=16% Similarity=0.169 Sum_probs=189.6
Q ss_pred ccCCCceEEEEecCcEEEEEeC-CeEEEEccccCCCCCC--Cccccc--------ccCccccchhhhhhhccccCCCCCC
Q 018490 73 AVATDVFKLTYLEGNSWLWDLD-GVKVLVDPILVGNLDF--GIPWLF--------DAGKKFLKSFQIVLIGMKTLVQLSD 141 (355)
Q Consensus 73 ~~~~~~~~itwlGhss~li~~~-g~~iLiDP~~sg~~~~--p~~~~~--------~g~~~r~~~~~~~~~g~~~~~~~~~ 141 (355)
.++++.|+|+|+||||++|+.+ |++||||||++ .... +.+.+. .|. +++.+ .+.+.+..++.++
T Consensus 32 ~~~~~~~~it~lG~s~~lI~~~~g~~iLiDP~~G-~g~~~~~~~~~~~~~ql~~~~G~-~~l~~---~~~~~p~~l~~~~ 106 (360)
T 2wyl_A 32 QVAPGTFAMWWLGCTGIWLKSEGGTNVCVDFWCG-TGKQSHGNPLMKQGHQMQRMAGV-KKLQP---NLRTTPFVLDPFA 106 (360)
T ss_dssp CCCTTCEEEEEEETTEEEEECTTCCEEEESCCCC-CCCCCCCC-----------------CCCC---CCBCSCCCCCGGG
T ss_pred cCCCCcEEEEEecccEEEEEeCCCCEEEEeecCC-CCcccccccccccchhhhhhcCc-cccCC---CcccCCCccCHHH
Confidence 3567889999999999999995 99999999874 3320 000000 000 11100 0000001233446
Q ss_pred CCCcCEEEecCCCCCCCChhhHHHhhhcCC-CceEEEcCChHHHHhhcCC---ceEEcCCCceEEeCcccCCceEEEEEe
Q 018490 142 LPQVDCLLITQSLDDHCHLKTLKPLSKMSP-NLKVIATPNAKTLLDPLFQ---NVTYVEPGQSSEIEGRNGSKLRVKATA 217 (355)
Q Consensus 142 lp~iD~VlISH~H~DHld~~tl~~l~~~~~-~~~v~~~~~~~~~l~~~~~---~v~~l~~~e~~~l~~~~~~~l~i~~~p 217 (355)
++++|+|||||.|+||++..++..+.++++ ++++|++......+++++. +++++++|++++++ +++|+++|
T Consensus 107 l~~id~VliTH~H~DHig~~~l~~l~~~~~~~~~v~~p~~~~~~l~~~g~~~~~~~~l~~g~~~~~g-----~~~v~~~~ 181 (360)
T 2wyl_A 107 IRQIDAVLATHDHNDHIDVNVAAAVMQNCADDVPFIGPKTCVDLWIGWGVPKERCIVVKPGDVVKVK-----DIEIHALD 181 (360)
T ss_dssp CCCCSEEECSBSCTTTCCHHHHHHHHHHSCTTCCEEECHHHHHHHHHHTCCGGGEEECCTTCEEEET-----TEEEEEEE
T ss_pred cCCCCEEEECCCchhcCCHHHHHHHHhcCCCCCEEEEcHHHHHHHHHcCCChheEEEcCCCCEEEEC-----CEEEEEEe
Confidence 778999999999999998778888876653 7899998887778887753 79999999999998 89999999
Q ss_pred cCccC-------------CC--C-CCCccEEEEEecCCceeEEEcCCCCCCccccccc---CCcEEEEccccccCCCcee
Q 018490 218 GPVLG-------------PP--W-QRPENGYLVNSSQGQLTLYYEPHCVYNQNFLEKE---RSDIIITPVIKQLLPKFTL 278 (355)
Q Consensus 218 a~~~g-------------~~--~-~~~~~g~~i~~~~~~~~i~~sGDt~~~~~~~~~~---~~Dl~~l~~g~~~~~~~~~ 278 (355)
+.|+. +. . ...++||+|+.+ +.+|||+|||++...+.++. ++|++++++++ .......
T Consensus 182 ~~H~~~~~~~~~~~h~~g~~~~~~~~~~~g~~i~~~--g~~i~~sGDt~~~~~~~~i~~~~~~Dv~il~~g~-~~~~~~~ 258 (360)
T 2wyl_A 182 AFDRTALITLPADQKAAGVLPDGMDDRAVNYLFKTP--GGSLYHSGDSHYSNYYAKHGNEHQIDVALGSYGE-NPRGITD 258 (360)
T ss_dssp CCCC------------------CCTTTBEEEEEEET--TEEEEECTTCCCCTTHHHHHHHSCCCEEEEEBCC-CCTTCCC
T ss_pred ccCcccccccccccccccccccccCcccEEEEEEEC--CcEEEEeCCCCcCHHHHHHhhCCCCCEEEecCCC-CcccccC
Confidence 97642 10 0 124689999987 68999999999988766543 89999999975 2112245
Q ss_pred ccCHHHHHHHHHHcCCCEEEEeccCCccccccccccccccCCHHHHHHHHHhc----CCCCeEeccCCCCeEEcCCCCC
Q 018490 279 VSGQEDAVKLAKLLHAKFIVPMKNGDLDSKGFLASIIQSEGTVESFKELLSKE----LPDAQLLEPTPGEPLEIPAPSD 353 (355)
Q Consensus 279 h~~~~ea~~~~~~l~~k~~ip~H~~~f~~~g~l~~~~~~~~~~~~~~~~~~~~----~~~~~~~~p~~Ge~~~l~~~~~ 353 (355)
||+++||++++++++++++||+|+++|. ...++++++++.+++. +...++..+++||++.+..+++
T Consensus 259 h~~~~ea~~~~~~l~~k~vi~~H~~~~~---------~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Ge~~~l~~d~~ 328 (360)
T 2wyl_A 259 KMTSADMLRMGEALNAKVVIPFHHDIWS---------NFQADPQEIRVLWEMKKDRLKYGFKPFIWQVGGKFTWPLDKD 328 (360)
T ss_dssp SBCHHHHHHHHHHHTCSEEEEESTTTBG---------GGCCCTHHHHHHHHHHTTTTTCCCEECBCCTTCEEEETTTTT
T ss_pred CCCHHHHHHHHHHhCCCEEEEEeecccc---------ccCCCHHHHHHHHHhhhhhhcCCcceEEccCCcEEEecCCCC
Confidence 9999999999999999999999999986 1256678888888743 2357888999999999976543
No 3
>3kl7_A Putative metal-dependent hydrolase; structural genomics, JOI for structural genomics, JCSG; 2.30A {Parabacteroides distasonis atcc 8503}
Probab=100.00 E-value=5.2e-33 Score=254.10 Aligned_cols=194 Identities=22% Similarity=0.374 Sum_probs=159.7
Q ss_pred CCCceEEEEecCcEEEEEeCCeEEEEccccCCCCCCCcccccccCccccchhhhhhhccccCCCCCCCCCcCEEEecCCC
Q 018490 75 ATDVFKLTYLEGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQIVLIGMKTLVQLSDLPQVDCLLITQSL 154 (355)
Q Consensus 75 ~~~~~~itwlGhss~li~~~g~~iLiDP~~sg~~~~p~~~~~~g~~~r~~~~~~~~~g~~~~~~~~~lp~iD~VlISH~H 154 (355)
+.++|+|||+|||||+|+.++.+|||||+++. .. .++++++|+|||||.|
T Consensus 26 ~~~~~~it~lg~s~~li~~~~~~iliDpg~~~-~~-----------------------------~~~~~~id~VliTH~H 75 (235)
T 3kl7_A 26 SGKELTITFIKHGSLMLTYDNHSIQVDPVSEY-AD-----------------------------YTTFPKADIILITHEH 75 (235)
T ss_dssp TSCEEEEEEEETTEEEEEETTEEEEESCCTTT-CC-----------------------------TTSSCCCSEEEECCSS
T ss_pred CCCCeEEEEEcceEEEEEECCEEEEECCCCCc-cc-----------------------------hhhCCCCCEEEECCCc
Confidence 46789999999999999999999999996531 10 2345689999999999
Q ss_pred CCCCChhhHHHhhhcCCCceEEEcCChHHHHhhcCCceEEcCCCc-eEEeCcccCCceEEEEEecCccCCC-----CCCC
Q 018490 155 DDHCHLKTLKPLSKMSPNLKVIATPNAKTLLDPLFQNVTYVEPGQ-SSEIEGRNGSKLRVKATAGPVLGPP-----WQRP 228 (355)
Q Consensus 155 ~DHld~~tl~~l~~~~~~~~v~~~~~~~~~l~~~~~~v~~l~~~e-~~~l~~~~~~~l~i~~~pa~~~g~~-----~~~~ 228 (355)
+||++..++..+.+ +++++|+++.....++ ++.++++|+ +++++ +++|+++|+.|+... ....
T Consensus 76 ~DH~~~~~l~~~~~--~~~~v~~~~~~~~~l~----~~~~l~~g~~~~~~g-----~~~i~~~p~~H~~~~~~~~~~~~~ 144 (235)
T 3kl7_A 76 GDHLDPKAIQAVEK--SDTEIIANENSQKKLG----KGKVLKNGDTDTSIS-----YMKIEAVPAYNTTPGRDKYHPRHR 144 (235)
T ss_dssp TTTCCHHHHHHHCC--TTCEEEECHHHHHHHT----CSEECCTTCEECCST-----TCEEEEEECCCCSTTGGGTSCTTT
T ss_pred cccCCHHHHHHhhc--CCCEEEEcHHHHHHhc----CcEEecCCCEEEEEC-----CEEEEEEEeecCCCccccccCCCC
Confidence 99998788887653 4799999987777664 468899999 88887 899999999875321 1123
Q ss_pred ccEEEEEecCCceeEEEcCCCCCCcccccccCCcEEEEccccccCCCceeccCHHHHHHHHHHcCCCEEEEeccCCcccc
Q 018490 229 ENGYLVNSSQGQLTLYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLAKLLHAKFIVPMKNGDLDSK 308 (355)
Q Consensus 229 ~~g~~i~~~~~~~~i~~sGDt~~~~~~~~~~~~Dl~~l~~g~~~~~~~~~h~~~~ea~~~~~~l~~k~~ip~H~~~f~~~ 308 (355)
++||+|+.+ +.++||+|||++.+++.+++++|++++|+++ ..||+++||+++++++++++++|+||++
T Consensus 145 ~~g~~i~~~--g~~i~~~GDt~~~~~~~~l~~~Dv~il~~~~------~~h~~~~ea~~~~~~l~~k~vip~H~~~---- 212 (235)
T 3kl7_A 145 DNGYILTFD--GLRVYIAGDTEDIPEMKDLKDIDIAFLPVNQ------PYTMTVSQAAKAARMFSPKILYPYHYGD---- 212 (235)
T ss_dssp SEEEEEEET--TEEEEECCSCCSCGGGGGCCSCSEEEEECCT------TTSCCHHHHHHHHHHHCCSEEEEESCTT----
T ss_pred ceEEEEEeC--CeEEEEECCCCchhhHHhhcCCCEEEECCCC------CcccCHHHHHHHHHHcCCCEEEEEcCCC----
Confidence 579999987 6899999999999988887899999999975 2488999999999999999999999986
Q ss_pred ccccccccccCCHHHHHHHHHhc
Q 018490 309 GFLASIIQSEGTVESFKELLSKE 331 (355)
Q Consensus 309 g~l~~~~~~~~~~~~~~~~~~~~ 331 (355)
.++++|++++++.
T Consensus 213 ----------~~~~~~~~~l~~~ 225 (235)
T 3kl7_A 213 ----------TKIGELKDALKDS 225 (235)
T ss_dssp ----------CCTTHHHHHTTTS
T ss_pred ----------CCHHHHHHHHhhC
Confidence 2466778877664
No 4
>3bv6_A Metal-dependent hydrolase; metallo protein, beta-lactamase like fold, MCSG, structural PSI-2, protein structure initiative; 1.80A {Vibrio cholerae o1 biovar eltor}
Probab=100.00 E-value=1.2e-32 Score=268.60 Aligned_cols=258 Identities=12% Similarity=0.096 Sum_probs=189.7
Q ss_pred ccCCCceEEEEecCcEEEEEeC-CeEEEEccccCCCCCC--Ccccccc--------cCccccchhhhhhhccccCCCCCC
Q 018490 73 AVATDVFKLTYLEGNSWLWDLD-GVKVLVDPILVGNLDF--GIPWLFD--------AGKKFLKSFQIVLIGMKTLVQLSD 141 (355)
Q Consensus 73 ~~~~~~~~itwlGhss~li~~~-g~~iLiDP~~sg~~~~--p~~~~~~--------g~~~r~~~~~~~~~g~~~~~~~~~ 141 (355)
.+.++.|+|+|+||||++|+.+ |.+||||||++ .+.. |.+.+.. |. +++.+ ++.+.+..++.++
T Consensus 56 ~~~~~~~~it~lG~s~~lI~~~~g~~iLiDP~~G-~g~~~~~~~~~~~~~q~~~~~G~-~~l~p---~~~~~p~~l~~~~ 130 (379)
T 3bv6_A 56 VVEPNTFSMWWLGCTGIWLKSAGNTNLSIDFWCG-TGKKTQKNRLMNTQHQMMRMGGV-EALQP---NLRTSIFPLDPFA 130 (379)
T ss_dssp CCCTTCEEEEEEETTEEEEEETTCCEEEESCCCC-CCCCCSSCCBCCTTCHHHHHHCC-CBCCC---CCBCSCCCSCGGG
T ss_pred cCCCCceEEEEecccEEEEEeCCCCEEEEccCCC-CCccccccccccccchhheecCc-cccCc---cccCCCCccChHH
Confidence 3467889999999999999996 99999999774 3321 1111100 00 11100 0000001233445
Q ss_pred CCCcCEEEecCCCCCCCChhhHHHhhhcCC-CceEEEcCChHHHHhhcCC---ceEEcCCCceEEeCcccCCceEEEEEe
Q 018490 142 LPQVDCLLITQSLDDHCHLKTLKPLSKMSP-NLKVIATPNAKTLLDPLFQ---NVTYVEPGQSSEIEGRNGSKLRVKATA 217 (355)
Q Consensus 142 lp~iD~VlISH~H~DHld~~tl~~l~~~~~-~~~v~~~~~~~~~l~~~~~---~v~~l~~~e~~~l~~~~~~~l~i~~~p 217 (355)
++++|+|||||.|+||++..++..+.++++ ++++|++.....++++++. +++++++|++++++ +++|+++|
T Consensus 131 ~~~iD~IliTH~H~DHig~~~l~~l~~~~~~~~~v~~~~~~~~~l~~~g~~~~~~~~l~~g~~~~~g-----~~~v~~~~ 205 (379)
T 3bv6_A 131 IKEIDAVLASHDHADHIDVNVAAAVLQNCGEHVKFIGPQACVDLWLGWGVPQERCIVAKVGDVLEIG-----DVKIRVLD 205 (379)
T ss_dssp CCCCSEEECSBCSGGGCCHHHHHHHHHHSCTTCEEEECHHHHHHHHHHTCCGGGEEECCTTCEEEET-----TEEEEEEE
T ss_pred CCCCCEEEECCCCcccCChHHHHHHHhcCCCCcEEEecHHHHHHHHHcCCChhhEEEeCCCCEEEEC-----CEEEEEEe
Confidence 778999999999999998778888877654 7899998887778887653 78999999999998 89999999
Q ss_pred cCccC------------CC--C---CCCccEEEEEecCCceeEEEcCCCCCCccccccc---CCcEEEEccccccCCCce
Q 018490 218 GPVLG------------PP--W---QRPENGYLVNSSQGQLTLYYEPHCVYNQNFLEKE---RSDIIITPVIKQLLPKFT 277 (355)
Q Consensus 218 a~~~g------------~~--~---~~~~~g~~i~~~~~~~~i~~sGDt~~~~~~~~~~---~~Dl~~l~~g~~~~~~~~ 277 (355)
+.|+. ++ . ...++||+|+.+ +.+|||+|||++...+.++. ++|++++++++ ......
T Consensus 206 ~~H~~~~~~~p~~h~~~~G~~~~~~~~~~~g~~i~~~--g~~i~~sGDt~~~~~~~~i~~~~~~Dv~il~~g~-~~~~~~ 282 (379)
T 3bv6_A 206 SFDRTALVTLPKGVSSYDKAILDGMDERAVNYLIETS--GGSVYHSGDSHYSNYYAKHGNDYQIDVALLSYGE-NPRGVT 282 (379)
T ss_dssp CCCHHHHTCCCTTSCSSCGGGGGCHHHHBEEEEEEET--TEEEEECTTCCCCTTHHHHHHHSCCSEEEEEBCC-CCTTCC
T ss_pred cccccccccccccccccccccccccCCceEEEEEEeC--CeEEEEeCCCCccHHHHHHhhcCCCCEEEecCCC-Cccccc
Confidence 97641 00 0 012679999987 68999999999988766543 89999999975 211224
Q ss_pred eccCHHHHHHHHHHcCCCEEEEeccCCccccccccccccccCCHHHHHHHHHhc----CCCCeEeccCCCCeEEcCCCC
Q 018490 278 LVSGQEDAVKLAKLLHAKFIVPMKNGDLDSKGFLASIIQSEGTVESFKELLSKE----LPDAQLLEPTPGEPLEIPAPS 352 (355)
Q Consensus 278 ~h~~~~ea~~~~~~l~~k~~ip~H~~~f~~~g~l~~~~~~~~~~~~~~~~~~~~----~~~~~~~~p~~Ge~~~l~~~~ 352 (355)
.||++++|+++++++++|+++|+|+++|. ...++++++++.+++. +...+++.+++||++++..+.
T Consensus 283 ~h~~~~ea~~~~~~l~~k~vi~~H~~~~~---------~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~~d~ 352 (379)
T 3bv6_A 283 DKMTSSDVLRAAESLDCQVVVPFHHDIWA---------NFQNDPREIEVLWNMKKDRLQYQFAPFFWQVGGKYTYPTDK 352 (379)
T ss_dssp CSBCHHHHHHHHHHHTCSEEEEESTTSBG---------GGCCCTHHHHHHHHHHTTTTTCCCEECBCCTTCEEEETTTT
T ss_pred ccCCHHHHHHHHHHcCCCEEEEEeecccc---------cccCCHHHHHHHHHhhhhhhcCCCceEEccCCcEEEecCCC
Confidence 59999999999999999999999999986 1256778888887732 235788899999999996554
No 5
>1vjn_A Zn-dependent hydrolase of metallo-beta-lactamase superfamily TM0207; metallo-hydrolase/oxidoreductase fold, structural genomics; 2.00A {Thermotoga maritima} SCOP: d.157.1.4
Probab=99.92 E-value=1.9e-24 Score=195.40 Aligned_cols=180 Identities=17% Similarity=0.205 Sum_probs=128.5
Q ss_pred CceEEEEecCcEEEEEeCCeEEEEccccCCCCCCCcccccccCccccchhhhhhhccccCCCCCCCCCcCEEEecCCCCC
Q 018490 77 DVFKLTYLEGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQIVLIGMKTLVQLSDLPQVDCLLITQSLDD 156 (355)
Q Consensus 77 ~~~~itwlGhss~li~~~g~~iLiDP~~sg~~~~p~~~~~~g~~~r~~~~~~~~~g~~~~~~~~~lp~iD~VlISH~H~D 156 (355)
..|..+|+||+|++|+.+|.+|||||+.+ ... +.. +..++|+|||||.|+|
T Consensus 11 ~~~~~~~~~~~~~li~~~~~~iLiD~g~~-~~~---------------------------~~~-~~~~id~VliTH~H~D 61 (220)
T 1vjn_A 11 HHMKITWFGHACFALEMEGKTIVTDPFDE-SVG---------------------------YPI-PNVTADVVTESHQHFD 61 (220)
T ss_dssp -CEEEEEEETTEEEEEETTEEEEESCCC---------------------------------CC-CCCBCSEEECSSCC--
T ss_pred cceeeEEccCCEEEEEECCEEEEEcCCCC-cCC---------------------------CCc-CCCCcCEEEECCCCCC
Confidence 45889999999999999999999999553 110 001 2348999999999999
Q ss_pred CCChhhHHHhhhcCCCceEEEcCChHHHHhhcCCceEEcCCCceEEeCcccCCceEEEEEecCccCC-CC-CCCccEEEE
Q 018490 157 HCHLKTLKPLSKMSPNLKVIATPNAKTLLDPLFQNVTYVEPGQSSEIEGRNGSKLRVKATAGPVLGP-PW-QRPENGYLV 234 (355)
Q Consensus 157 Hld~~tl~~l~~~~~~~~v~~~~~~~~~l~~~~~~v~~l~~~e~~~l~~~~~~~l~i~~~pa~~~g~-~~-~~~~~g~~i 234 (355)
|++.. .+. ++.+++. . +++++++ +++|+++|+.|... +. .+...||+|
T Consensus 62 H~~~~---~l~---~~~~vi~------------------~-~g~~~~~-----~~~I~~~~~~H~~~~g~~~g~~~g~~i 111 (220)
T 1vjn_A 62 HNAHH---LVK---GNFRVID------------------R-PGAYTVN-----GVKIKGVETFHDPSHGRERGKNIVFVF 111 (220)
T ss_dssp -CGGG---GCB---SSCEEEC------------------S-SEEEEET-----TEEEEEEEEEEC-------CEEEEEEE
T ss_pred CCCch---Hhc---CCCEEEc------------------C-CCeEEEC-----CEEEEEEeeecCCCCCccCCCcEEEEE
Confidence 98633 233 1444431 1 2367777 89999999987532 11 112479999
Q ss_pred EecCCceeEEEcCCCCCCccc---ccccCCcEEEEccccccCCCceeccCHHHHHHHHHHcCCCEEEEeccCCccccccc
Q 018490 235 NSSQGQLTLYYEPHCVYNQNF---LEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLAKLLHAKFIVPMKNGDLDSKGFL 311 (355)
Q Consensus 235 ~~~~~~~~i~~sGDt~~~~~~---~~~~~~Dl~~l~~g~~~~~~~~~h~~~~ea~~~~~~l~~k~~ip~H~~~f~~~g~l 311 (355)
+.+ +.+|||+||+++.+.+ ...+++|++++++++ ..||+++||+++++++++++++|+||+.+. +
T Consensus 112 ~~~--g~~i~~~GDt~~~~~~~~~~~~~~~Dvlil~~g~------~~h~~~~~a~~~~~~~~~k~vi~~H~~~~~----~ 179 (220)
T 1vjn_A 112 EGE--GIKVCHLGDLGHVLTPAQVEEIGEIDVLLVPVGG------TYTIGPKEAKEVADLLNAKVIIPMHYKTKY----L 179 (220)
T ss_dssp EET--TEEEEECTTCCSCCCHHHHHHHCCCSEEEEECCS------SSSCCHHHHHHHHHHTTCSEEEEESCCCSS----C
T ss_pred EEC--CeEEEEeCCCCCcchHHHHHhhCCCCEEEEcCCC------cCcCCHHHHHHHHHhcCCCEEEEEeccccc----c
Confidence 987 6899999999998642 223589999999975 148999999999999999999999999975 3
Q ss_pred cccccccCCHHHHHHHHHh
Q 018490 312 ASIIQSEGTVESFKELLSK 330 (355)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~ 330 (355)
+.. .+++++|.+++++
T Consensus 180 ~~~---~~~~~~~~~~~~~ 195 (220)
T 1vjn_A 180 KFN---LLPVDDFLKLFDS 195 (220)
T ss_dssp CTT---CCCTHHHHTTSSC
T ss_pred cCC---chhHHHHHHHHHh
Confidence 322 4678888887665
No 6
>1zkp_A Hypothetical protein BA1088; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.50A {Bacillus anthracis str} SCOP: d.157.1.9
Probab=99.91 E-value=4.2e-23 Score=191.03 Aligned_cols=217 Identities=13% Similarity=0.152 Sum_probs=159.5
Q ss_pred CCceEEEEec-----------CcEEEEEeCCeEEEEccccCCCCCCCcccccccCccccchhhhhhhccccCCCCCCCCC
Q 018490 76 TDVFKLTYLE-----------GNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQIVLIGMKTLVQLSDLPQ 144 (355)
Q Consensus 76 ~~~~~itwlG-----------hss~li~~~g~~iLiDP~~sg~~~~p~~~~~~g~~~r~~~~~~~~~g~~~~~~~~~lp~ 144 (355)
...|+|+||| ++|++|+.++..||||| |... . +++.. ..+..+
T Consensus 22 ~~~m~i~~LG~g~~~p~~~~~~~~~li~~~~~~iLiD~---G~~~-----~-----~~l~~-------------~~~~~~ 75 (268)
T 1zkp_A 22 SNAMKMTVVGFWGGFPEAGEATSGYLFEHDGFRLLVDC---GSGV-----L-----AQLQK-------------YITPSD 75 (268)
T ss_dssp SSCEEEEEEECBSSSCCTTCCBSEEEEEETTEEEEECC---CTTH-----H-----HHHTT-------------TCCGGG
T ss_pred CCCcEEEEEeCCCCcCCCCCCccEEEEEECCcEEEEEC---CHHH-----H-----HHHHH-------------hCCccc
Confidence 4569999999 89999999999999999 4221 0 11111 112347
Q ss_pred cCEEEecCCCCCCCChhhHHHhhh----------cCCCceEEEcCChHHHHhhcC----CceEEcCCCceEEeCcccCCc
Q 018490 145 VDCLLITQSLDDHCHLKTLKPLSK----------MSPNLKVIATPNAKTLLDPLF----QNVTYVEPGQSSEIEGRNGSK 210 (355)
Q Consensus 145 iD~VlISH~H~DHld~~tl~~l~~----------~~~~~~v~~~~~~~~~l~~~~----~~v~~l~~~e~~~l~~~~~~~ 210 (355)
||+|+|||.|.||+ +++..+.+ +.+++++|+++.....+++.. .++.+++++++++++ +
T Consensus 76 i~~v~iTH~H~DH~--~gl~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~g-----~ 148 (268)
T 1zkp_A 76 IDAVVLSHYHHDHV--ADIGVLQYARLITSATKGQLPELPIYGHTFDENGFHSLTHEPHTKGIPYNPEETLQIG-----P 148 (268)
T ss_dssp CCEEECSCCCHHHH--TTHHHHHHHHHHHHHHHCCCCCEEEEECSSSHHHHHTTCBTTTEEEEECCTTSCEEET-----T
T ss_pred CCEEEEecCCchhh--CCHHHHHHHHHhcccccCCCCceEEEeCccHHHHHHhcccCCccceEEecCCCeEEEC-----C
Confidence 99999999999995 55544432 124689999998887777642 457889999999997 8
Q ss_pred eEEEEEecCccCCCCCCCccEEEEEecCCceeEEEcCCCCCCcccccc-cCCcEEEEccccccCCC---ceeccCHHHHH
Q 018490 211 LRVKATAGPVLGPPWQRPENGYLVNSSQGQLTLYYEPHCVYNQNFLEK-ERSDIIITPVIKQLLPK---FTLVSGQEDAV 286 (355)
Q Consensus 211 l~i~~~pa~~~g~~~~~~~~g~~i~~~~~~~~i~~sGDt~~~~~~~~~-~~~Dl~~l~~g~~~~~~---~~~h~~~~ea~ 286 (355)
++|+++++.|+. ...+|+|+.+ +.+++|+||+.+.+.+.+. .++|+++++++. .... ...|+++++++
T Consensus 149 ~~v~~~~~~H~~-----~~~~~~i~~~--~~~i~~~GD~~~~~~~~~~~~~~d~li~e~~~-~~~~~~~~~~H~~~~~a~ 220 (268)
T 1zkp_A 149 FSISFLKTVHPV-----TCFAMRITAG--NDIVVYSADSSYIPEFIPFTKDADLFICECNM-YAHQEAAKAGHMNSTEVA 220 (268)
T ss_dssp EEEEEEECCSSS-----CCEEEEEEET--TEEEEECCSCCCCTTHHHHHTTCSEEEEECCB-CTTSCCGGGTCCBHHHHH
T ss_pred EEEEEEECCCCC-----CceEEEEEEC--CeEEEEeCCCCCCHHHHHHHcCCCEEEEECCC-CccccccCCCCCCHHHHH
Confidence 999999887641 2469999887 6799999999998776654 489999999853 1111 12399999999
Q ss_pred HHHHHcCCCEEEEeccCCccccccccccccccCCHHHHHHHHHhcCCCCeEeccCCCCeEE
Q 018490 287 KLAKLLHAKFIVPMKNGDLDSKGFLASIIQSEGTVESFKELLSKELPDAQLLEPTPGEPLE 347 (355)
Q Consensus 287 ~~~~~l~~k~~ip~H~~~f~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~Ge~~~ 347 (355)
++++.+++++++++|++... +.+++.+.+++. .+.++..+.+|++++
T Consensus 221 ~~~~~~~~~~lil~H~~~~~-------------~~~~~~~~~~~~-~~~~v~~a~dg~~~~ 267 (268)
T 1zkp_A 221 SIAKDANVKELLLTHLPHTG-------------NPADLVTEAKQI-FSGHITLAHSGYVWN 267 (268)
T ss_dssp HHHHHTTCSEEEEESBCSSS-------------CTHHHHHHHHTT-CCSEEEECCTTCEEE
T ss_pred HHHHHcCCCEEEEECCCCCC-------------ChHHHHHHHHHh-CCCCEEEEeCCcccc
Confidence 99999999999999998632 234455555443 233677778999874
No 7
>3zwf_A Zinc phosphodiesterase ELAC protein 1; beta-lactamase, hydrolase, metal-binding, tRNA processing, zinc-binding, catabolism; 1.70A {Homo sapiens}
Probab=99.91 E-value=1.2e-23 Score=204.27 Aligned_cols=238 Identities=16% Similarity=0.099 Sum_probs=146.3
Q ss_pred eEEEEec-----------CcEEEEEeCCeEEEEccccCCCCCCCcccccccCccccchhhhhhhccccCCCCCCCCCcCE
Q 018490 79 FKLTYLE-----------GNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQIVLIGMKTLVQLSDLPQVDC 147 (355)
Q Consensus 79 ~~itwlG-----------hss~li~~~g~~iLiDP~~sg~~~~p~~~~~~g~~~r~~~~~~~~~g~~~~~~~~~lp~iD~ 147 (355)
|+|++|| +||++|+.++.++|||| |... . +++.. ..+ ++.+||+
T Consensus 1 M~l~~LGtg~~~p~~~r~~ss~ll~~~~~~iLiD~---G~g~---~-------~~l~~---------~~~---~~~~id~ 55 (368)
T 3zwf_A 1 MDVTFLGTGAAYPSPTRGASAVVLRCEGECWLFDC---GEGT---Q-------TQLMK---------SQL---KAGRITK 55 (368)
T ss_dssp CEEEEEECBSSSCCSSSCSSEEEEEETTEEEEECC---CTTH---H-------HHHHH---------SSS---CGGGEEE
T ss_pred CEEEEECCCCCCCCCCCCccEEEEEECCeEEEEeC---ChhH---H-------HHHHH---------cCC---ChHHCCE
Confidence 6889998 89999999999999999 5322 0 11111 112 2237999
Q ss_pred EEecCCCCCCCChhhHHHhhhc----------CCCceEEEcCChHHHHhhc--------C--CceEEcCCC---------
Q 018490 148 LLITQSLDDHCHLKTLKPLSKM----------SPNLKVIATPNAKTLLDPL--------F--QNVTYVEPG--------- 198 (355)
Q Consensus 148 VlISH~H~DHld~~tl~~l~~~----------~~~~~v~~~~~~~~~l~~~--------~--~~v~~l~~~--------- 198 (355)
|||||.|+||+ .++..|... .+.++||+++....+++.. . ..++++.+.
T Consensus 56 I~iTH~H~DHi--~gl~~l~~~~~~~~~~~~~~~~l~iygp~~~~~~l~~~l~~~~~~~~~~~~~~el~~~~~~~~~~~~ 133 (368)
T 3zwf_A 56 IFITHLHGDHF--FGLPGLLCTISLQSGSMVSKQPIEIYGPVGLRDFIWRTMELSHTELVFHYVVHELVPTADQCPAEEL 133 (368)
T ss_dssp EECCCSSGGGT--TTHHHHHHHHHHHC------CCEEEEEETTHHHHHHHHHHHTTCCCSSCEEEEEECCCGGGSCC---
T ss_pred EEECCCChHHh--CcHHHHHHHhhhccccccCCCCeEEEEcHHHHHHHHHHHHhhCcCCCceEEEEEeecCccccccccc
Confidence 99999999996 344333221 1368999999887776652 1 256777642
Q ss_pred ------------------ceEEeCc-------ccCCceEEEEEecCccCCCCCCCccEEEEEecC---------------
Q 018490 199 ------------------QSSEIEG-------RNGSKLRVKATAGPVLGPPWQRPENGYLVNSSQ--------------- 238 (355)
Q Consensus 199 ------------------e~~~l~~-------~~~~~l~i~~~pa~~~g~~~~~~~~g~~i~~~~--------------- 238 (355)
+.+.++. ...++++|+++|..|.- ...||+|+...
T Consensus 134 ~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~V~a~~~~H~v-----p~~gy~i~e~~~~g~~~~ek~~~~gi 208 (368)
T 3zwf_A 134 KEFAHVNRADSPPKEEQGRTILLDSEENSYLLFDDEQFVVKAFRLFHRI-----PSFGFSVVEKKRPGKLNAQKLKDLGV 208 (368)
T ss_dssp ----------------CCCEECCBTTTTBEEEEECSSEEEEEEEEESSS-----CEEEEEEEECC---------------
T ss_pred cccccccccccCcccccccccccccccCceeEEeCCCEEEEEEeccCCC-----ceEEEEEEecCCcCccCHHHHHHcCC
Confidence 2221100 00138999999998742 24689887531
Q ss_pred ---------------------------------CceeEEEcCCCCC--Cccccccc-CCcEEEEccccccCCC------c
Q 018490 239 ---------------------------------GQLTLYYEPHCVY--NQNFLEKE-RSDIIITPVIKQLLPK------F 276 (355)
Q Consensus 239 ---------------------------------~~~~i~~sGDt~~--~~~~~~~~-~~Dl~~l~~g~~~~~~------~ 276 (355)
.|.+|+|+|||++ ...+.+.. ++|++++++. +... -
T Consensus 209 p~G~~~~~Lk~G~~v~~~dG~~i~~~~v~~~~~~g~~v~~~GDT~~~~~~~~~~~~~~~Dlli~Eat--~~~~~~~~a~~ 286 (368)
T 3zwf_A 209 PPGPAYGKLKNGISVVLENGVTISPQDVLKKPIVGRKICILGDCSGVVGDGGVKLCFEADLLIHEAT--LDDAQMDKAKE 286 (368)
T ss_dssp ---------------------------------CCCEEEEECSCSEECSSHHHHHTTTCSEEEEECC--SCGGGHHHHHH
T ss_pred CchHHHHhcCCCCeEEecCCEEEEhHHhccccccceEEEEEecCCcccchhHHHHhcCCCEEEEecC--CChHHHhhhhc
Confidence 0579999999998 55555543 8999999983 2221 1
Q ss_pred eeccCHHHHHHHHHHcCCCEEEEeccCCccccccccccccccCCHHHHHHHHHhcCCCCeEeccCCCCeEEcCCC
Q 018490 277 TLVSGQEDAVKLAKLLHAKFIVPMKNGDLDSKGFLASIIQSEGTVESFKELLSKELPDAQLLEPTPGEPLEIPAP 351 (355)
Q Consensus 277 ~~h~~~~ea~~~~~~l~~k~~ip~H~~~f~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~Ge~~~l~~~ 351 (355)
..||+++||+++++++++|+++++|++.....+.+... .-.++++++++++++...+..+...++|+++++...
T Consensus 287 ~~H~t~~~A~~~a~~~~~k~lil~H~s~ry~~~~~~~~-~~~~~~~~~~~ea~~~f~~~~~~~a~dg~~~~i~~~ 360 (368)
T 3zwf_A 287 HGHSTPQMAATFAKLCRAKRLVLTHFSQRYKPVALARE-GETDGIAELKKQAESVLDLQEVTLAEDFMVISIPIK 360 (368)
T ss_dssp TTCCCHHHHHHHHHHTTCSEEEEECBCCCC----------------------------CEEEECCTTCEEECCC-
T ss_pred CCCCCHHHHHHHHHHcCCCEEEEEeeCcccCccccccc-cccchHHHHHHHHHHhcCCCceEEecCCcEEEeecC
Confidence 24999999999999999999999999976410000000 012457778888777544446777889999999644
No 8
>1y44_A Ribonuclease Z; zinc-dependent metal hydrolase, hydrolase; HET: MES; 2.10A {Bacillus subtilis} SCOP: d.157.1.7 PDB: 2fk6_A*
Probab=99.90 E-value=9.6e-23 Score=193.36 Aligned_cols=224 Identities=17% Similarity=0.124 Sum_probs=158.1
Q ss_pred eEEEEec-----------CcEEEEEe---CCeEEEEccccCCCCCCCcccccccCccccchhhhhhhccccCCCCCCCCC
Q 018490 79 FKLTYLE-----------GNSWLWDL---DGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQIVLIGMKTLVQLSDLPQ 144 (355)
Q Consensus 79 ~~itwlG-----------hss~li~~---~g~~iLiDP~~sg~~~~p~~~~~~g~~~r~~~~~~~~~g~~~~~~~~~lp~ 144 (355)
|+|++|| ++|++|+. ++.++|||| |... . +++.. .. .++.+
T Consensus 1 M~i~~LGtg~~~p~~~r~~~~~li~~~~~~~~~iLiD~---G~~~-~---------~~l~~---------~~---~~~~~ 55 (320)
T 1y44_A 1 MELLFLGTGAGIPAKARNVTSVALKLLEERRSVWLFDC---GEAT-Q---------HQMLH---------TT---IKPRK 55 (320)
T ss_dssp CEEEEEECBSSSCCSSCCBCEEEEEETTTTSEEEEECC---CTTH-H---------HHHTT---------SS---CCGGG
T ss_pred CEEEEEecCCCCCCccCCCCEEEEEEecCCCcEEEEEC---CHHH-H---------HHHHH---------cC---CCHHH
Confidence 5788888 79999999 999999999 4221 0 11111 01 12347
Q ss_pred cCEEEecCCCCCCC-ChhhHHHh---hhcCCCceEEEcCChHHHHhhc---C-------CceEEcCCCceEEeCcccCCc
Q 018490 145 VDCLLITQSLDDHC-HLKTLKPL---SKMSPNLKVIATPNAKTLLDPL---F-------QNVTYVEPGQSSEIEGRNGSK 210 (355)
Q Consensus 145 iD~VlISH~H~DHl-d~~tl~~l---~~~~~~~~v~~~~~~~~~l~~~---~-------~~v~~l~~~e~~~l~~~~~~~ 210 (355)
+|+|||||.|+||+ ++..+... ..+.++++||+++.....++.. . .+++++++|+.++++ +
T Consensus 56 i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-----~ 130 (320)
T 1y44_A 56 IEKIFITHMHGDHVYGLPGLLGSRSFQGGEDELTVYGPKGIKAFIETSLAVTKTHLTYPLAIQEIEEGIVFEDD-----Q 130 (320)
T ss_dssp EEEEECSBCCGGGTTTHHHHHHHHHHTTCCSCEEEEESTTHHHHHHHHHHHTTCCCSSCEEEEECCSEEEEECS-----S
T ss_pred cCEEEEeCCChhhhCCHHHHHHHHHhcCCCCCEEEEeCHHHHHHHHHHHHhhccCCCCceEEEEcCCCceEecC-----C
Confidence 99999999999997 33333321 1112368999999887766543 1 257889999888887 8
Q ss_pred eEEEEEecCccCCCCCCCccEEEEEec------------------------------------------------CCcee
Q 018490 211 LRVKATAGPVLGPPWQRPENGYLVNSS------------------------------------------------QGQLT 242 (355)
Q Consensus 211 l~i~~~pa~~~g~~~~~~~~g~~i~~~------------------------------------------------~~~~~ 242 (355)
++|+++|..|+.. ..||+++.. .++.+
T Consensus 131 ~~v~~~p~~H~~~-----~~gy~i~~~~~~~~~~~~~~~~~g~~~g~~~~~l~~g~~v~~~~G~i~~~~~~~~~~~~g~~ 205 (320)
T 1y44_A 131 FIVTAVSVIHGVE-----AFGYRVQEKDVPGSLKADVLKEMNIPPGPVYQKIKKGETVTLEDGRIINGNDFLEPPKKGRS 205 (320)
T ss_dssp EEEEEEECBSSSS-----BEEEEEEECCBCCCC--------------------------------------CCCCBCCCE
T ss_pred EEEEEEEccCCCC-----cceEEEecCCCcCccCHHHHHHcCCCCchhHHHhhCCCeEEcCCCeEEcHHHhcccCCCCCE
Confidence 9999999876421 346766531 02579
Q ss_pred EEEcCCCCCCccccccc-CCcEEEEccccccCCC------ceeccCHHHHHHHHHHcCCCEEEEeccCCccccccccccc
Q 018490 243 LYYEPHCVYNQNFLEKE-RSDIIITPVIKQLLPK------FTLVSGQEDAVKLAKLLHAKFIVPMKNGDLDSKGFLASII 315 (355)
Q Consensus 243 i~~sGDt~~~~~~~~~~-~~Dl~~l~~g~~~~~~------~~~h~~~~ea~~~~~~l~~k~~ip~H~~~f~~~g~l~~~~ 315 (355)
|+|+||+++.+.+.+.. ++|++++++. +... ...||+++||+++++++++++++++|++...
T Consensus 206 i~~sgDt~~~~~~~~~~~~~D~li~E~t--~~~~~~~~a~~~~H~t~~~a~~~a~~~~~~~lil~H~s~~~--------- 274 (320)
T 1y44_A 206 VVFSGDTRVSDKLKELARDCDVMVHEAT--FAKEDRKLAYDYYHSTTEQAAVTAKEARAKQLILTHISARY--------- 274 (320)
T ss_dssp EEECCSCBCCHHHHHHTTTCSEEEEECC--BCTTCHHHHHHTTCCBHHHHHHHHHHHTCSEEEEECBCTTS---------
T ss_pred EEEeCCCCCHHHHHHHhCCCCEEEEecc--CCcchHhHHhhcCCCCHHHHHHHHHHcCCCEEEEEeEcCCC---------
Confidence 99999999998776654 8999999985 2221 1349999999999999999999999998632
Q ss_pred cccCCHHHHHHHHHhcCCCCeEeccCCCCeEEcCCC
Q 018490 316 QSEGTVESFKELLSKELPDAQLLEPTPGEPLEIPAP 351 (355)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~p~~Ge~~~l~~~ 351 (355)
. ..+++++.+++++... .+..+.+|+++.+...
T Consensus 275 ~-~~~~~~~~~e~~~~~~--~~~~a~dg~~~~l~~~ 307 (320)
T 1y44_A 275 Q-GDASLELQKEAVDVFP--NSVAAYDFLEVNVPRG 307 (320)
T ss_dssp C-TTHHHHHHHHHHHHCS--SEEECCTTCEEECCCC
T ss_pred C-CcchHHHHHHHHHhCC--CcEeccCCCEEEecch
Confidence 0 2245667776665433 4667789999999653
No 9
>2cbn_A Ribonuclease Z; phosphodiesterase beta lactamase tRNAse Z, hydrolase, metal- binding, endonuclease, tRNA processing, zinc; 2.9A {Escherichia coli} SCOP: d.157.1.7
Probab=99.89 E-value=3e-22 Score=188.47 Aligned_cols=219 Identities=14% Similarity=0.060 Sum_probs=156.2
Q ss_pred eEEEEec-----------CcEEEEEe----CCeEEEEccccCCCCCCCcccccccCccccchhhhhhhccccCCCCCCCC
Q 018490 79 FKLTYLE-----------GNSWLWDL----DGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQIVLIGMKTLVQLSDLP 143 (355)
Q Consensus 79 ~~itwlG-----------hss~li~~----~g~~iLiDP~~sg~~~~p~~~~~~g~~~r~~~~~~~~~g~~~~~~~~~lp 143 (355)
|+|++|| ++|++|+. ++.+||||| |... . +++.. ..+ ++.
T Consensus 2 m~i~~LGtg~~~p~~~r~~~~~li~~~~~~~~~~iliD~---G~~~--~--------~~l~~---------~~~---~~~ 56 (306)
T 2cbn_A 2 MNLIFLGTSAGVPTRTRNVTAILLNLQHPTQSGLWLFDC---GEGT--Q--------HQLLH---------TAF---NPG 56 (306)
T ss_dssp CEEEEEECBSSSCCSSCCBCEEEEECCCSSCCCEEEECC---CTTH--H--------HHHHT---------SCC---CTT
T ss_pred eEEEEEEcCCCCCCCCCCCCEEEEEeecCCCCcEEEEEC---CHHH--H--------HHHHH---------hCC---CHH
Confidence 6788887 69999999 889999999 5221 0 11111 111 335
Q ss_pred CcCEEEecCCCCCCCChhhHHHhhh------cCCCceEEEcCChHHHHhhc---C-------CceEEcCCCceEEeCccc
Q 018490 144 QVDCLLITQSLDDHCHLKTLKPLSK------MSPNLKVIATPNAKTLLDPL---F-------QNVTYVEPGQSSEIEGRN 207 (355)
Q Consensus 144 ~iD~VlISH~H~DHld~~tl~~l~~------~~~~~~v~~~~~~~~~l~~~---~-------~~v~~l~~~e~~~l~~~~ 207 (355)
++|+|||||.|.||+ .++..|.+ +.+++++|+++.....++.. . .+++++++|+.++++
T Consensus 57 ~i~~i~iTH~H~DH~--~gl~~l~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~--- 131 (306)
T 2cbn_A 57 KLDKIFISHLHGDHL--FGLPGLLCSRSMSGIIQPLTIYGPQGIREFVETALRISGSWTDYPLEIVEIGAGEILDDG--- 131 (306)
T ss_dssp TEEEEECSCCCHHHH--TTHHHHHHHHHHTTCCSCEEEEESTTHHHHHHHHHHHTTCCCSSCEEEEECCSEEEEECS---
T ss_pred HcCEEEEecCCchhh--CChHHHHHHHHhcCCCCCeEEEcCccHHHHHHHHHHhhccCCCceEEEEEcCCCcEeecC---
Confidence 899999999999996 45444432 12368899999887766543 1 257889999888887
Q ss_pred CCceEEEEEecCccCCCCCCCccEEEEEec------------------------------------------------CC
Q 018490 208 GSKLRVKATAGPVLGPPWQRPENGYLVNSS------------------------------------------------QG 239 (355)
Q Consensus 208 ~~~l~i~~~pa~~~g~~~~~~~~g~~i~~~------------------------------------------------~~ 239 (355)
+++|+++|..|... ..||+++.. ..
T Consensus 132 --~~~v~~~~~~H~~~-----~~gy~i~~~~~~~~~~~~~~~~~gv~~~~~~~~l~~g~~v~~~~G~~~~~~~~~~~~~~ 204 (306)
T 2cbn_A 132 --LRKVTAYPLEHPLE-----CYGYRIEEHDAPGALNAQALKAAGVPPGPLFQELKAGKTITLEDGRQINGADYLAAPVP 204 (306)
T ss_dssp --SEEEEEEECBSSSC-----CEEEEEEECCCCCCBCHHHHHHTTCCSSHHHHHHHHTCCCEETTTEECCGGGTBCCCCC
T ss_pred --CEEEEEEEccCCCC-----ccEEEEEecCccCccCHHHHHHcCCCCchHHHHhcCCCeEEcCCCcEEcHHHhcCCCCC
Confidence 89999999887422 358888641 12
Q ss_pred ceeEEEcCCCCCCccccccc-CCcEEEEccccccCCC------ceeccCHHHHHHHHHHcCCCEEEEeccCCcccccccc
Q 018490 240 QLTLYYEPHCVYNQNFLEKE-RSDIIITPVIKQLLPK------FTLVSGQEDAVKLAKLLHAKFIVPMKNGDLDSKGFLA 312 (355)
Q Consensus 240 ~~~i~~sGDt~~~~~~~~~~-~~Dl~~l~~g~~~~~~------~~~h~~~~ea~~~~~~l~~k~~ip~H~~~f~~~g~l~ 312 (355)
+.+|+|+||+++.+.+.+.. ++|++++++. +... ...||+++||+++++++++|+++++|++...
T Consensus 205 g~~i~~sgDt~~~~~~~~~~~~~D~li~E~t--~~~~~~~~a~~~~H~t~~~a~~~a~~~~~~~lvl~H~s~~~------ 276 (306)
T 2cbn_A 205 GKALAIFGDTGPCDAALDLAKGVDVMVHEAT--LDITMEAKANSRGHSSTRQAATLAREAGVGKLIITHVSSRY------ 276 (306)
T ss_dssp CCEEEECCSCBSCSTHHHHHTTCSEEEEECC--BCGGGHHHHHHTTCCBHHHHHHHHHHHTCSEEEEECBCTTC------
T ss_pred CCEEEEeCCCCCHHHHHHHhcCCCEEEEECc--CChhhHhHHhhcCCCCHHHHHHHHHHcCCcEEEEEeecCCC------
Confidence 57999999999988776544 8999999984 2221 1249999999999999999999999998632
Q ss_pred ccccccCCHHHHHHHHHhcCCCCeEeccCCCCeEEc
Q 018490 313 SIIQSEGTVESFKELLSKELPDAQLLEPTPGEPLEI 348 (355)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~Ge~~~l 348 (355)
. ..+.+++.+.+++... .+..+.+|+++++
T Consensus 277 ---~-~~~~~~~~~e~~~~~~--~~~~a~Dg~~~~~ 306 (306)
T 2cbn_A 277 ---D-DKGCQHLLRECRSIFP--ATELANDFTVFNV 306 (306)
T ss_dssp ---C-HHHHHHHHHHHHTTCS--CEEECCTTCEEEC
T ss_pred ---C-CCchhHHHHHHHHhCC--CcEEcccccEeeC
Confidence 0 1234556666655433 4666779999875
No 10
>3md7_A Beta-lactamase-like; ssgcid, hydrolase, structural genomics, structural genomics center for infectious disease; HET: 5GP TLA; 1.27A {Brucella melitensis biovar abortus} PDB: 3qh8_A* 3py6_A* 3py5_A*
Probab=99.86 E-value=5.2e-21 Score=179.75 Aligned_cols=212 Identities=16% Similarity=0.168 Sum_probs=148.0
Q ss_pred cCCCceEEEEec---------------------------CcEEEEEe---CC--eEEEEccccCCCCCCCcccccccCcc
Q 018490 74 VATDVFKLTYLE---------------------------GNSWLWDL---DG--VKVLVDPILVGNLDFGIPWLFDAGKK 121 (355)
Q Consensus 74 ~~~~~~~itwlG---------------------------hss~li~~---~g--~~iLiDP~~sg~~~~p~~~~~~g~~~ 121 (355)
...+.|+|++|| ++|++|+. +| .+||||| |... . .
T Consensus 24 ~~~~~m~v~~LG~g~~~G~P~~~c~c~~C~~~~~~~~R~~~s~li~~~~~~g~~~~iLID~---G~~~-----~-----~ 90 (293)
T 3md7_A 24 SPRNCLRFTLLGCGSSPGVPRINGDWGKCDPKNPKNRRRRASLLVERYDAEGNNTVVVIDT---GPDF-----R-----M 90 (293)
T ss_dssp CCCSEEEEEEEECBCTTCBSCTTCCCTTSCTTCGGGCBCBCEEEEEEECTTCCEEEEEECC---CTTH-----H-----H
T ss_pred cCCCcEEEEEEeecCCCCcccCCCCCccCCccCCCCcccccEEEEEecCCCCceeEEEEEC---CccH-----H-----H
Confidence 345679999998 37899996 45 7999999 5321 0 1
Q ss_pred ccchhhhhhhccccCCCCCCCCCcCEEEecCCCCCCCChhhHHHhhh----cCCCceEEEcCChHHHHhhc----C----
Q 018490 122 FLKSFQIVLIGMKTLVQLSDLPQVDCLLITQSLDDHCHLKTLKPLSK----MSPNLKVIATPNAKTLLDPL----F---- 189 (355)
Q Consensus 122 r~~~~~~~~~g~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~l~~----~~~~~~v~~~~~~~~~l~~~----~---- 189 (355)
++.. .++.+||+|||||.|+||+ .++..|.. +..++++|+++...+.+++. +
T Consensus 91 ~l~~--------------~~~~~id~IliTH~H~DHi--~Gl~~l~~~~~~~~~~~~vy~~~~~~~~l~~~~~~~~~~~~ 154 (293)
T 3md7_A 91 QMID--------------SGVHMLDAAVYTHPHADHI--HGIDDLRTYVVDNGRLMDVYANRLTRNRLYDTFGYCFETPV 154 (293)
T ss_dssp HHHH--------------HTCCCCSEEECSCCCHHHH--TTGGGGHHHHHHHTSCEEEEECHHHHHHHHHHCGGGTSCCT
T ss_pred HHHh--------------cCCCcccEEEEcCCCchhh--CCHHHHHHHhhcCCCceEEEECHHHHHHHHHhhhhhhcccc
Confidence 1111 1235899999999999995 44443322 12478999998877766542 0
Q ss_pred -------CceEEcCCCceEEeCcccCCc----eEEEEEecCccCCCCCCCccEEEEEecCCceeEEEcCCCCCC-ccccc
Q 018490 190 -------QNVTYVEPGQSSEIEGRNGSK----LRVKATAGPVLGPPWQRPENGYLVNSSQGQLTLYYEPHCVYN-QNFLE 257 (355)
Q Consensus 190 -------~~v~~l~~~e~~~l~~~~~~~----l~i~~~pa~~~g~~~~~~~~g~~i~~~~~~~~i~~sGDt~~~-~~~~~ 257 (355)
.+++++++|++++++ + ++|++++..|.. ....||+|+ +++|+||+++. +.+.+
T Consensus 155 ~~~~~~~~~~~~l~~g~~~~~g-----~~~~~~~v~~~~~~H~~----~~~~g~~i~------~~~y~gDt~~~~~~~~~ 219 (293)
T 3md7_A 155 GSSYPPILSMHDIAPETPFSIE-----GAGGAIRFEPFSQVHGD----IESLGFRIG------SVVYCTDVSAFPEQSLQ 219 (293)
T ss_dssp TCCCCCCEEEEECCTTCCEEEC-----CTTCCEEEEEEEEEETT----EEEEEEEET------TEEEECSCSBCCGGGHH
T ss_pred ccCCCCceEEEEcCCCCcEEEC-----CCCCcEEEEEEEecCCC----CCEEEEEEe------EEEEECCCCCCCHHHHH
Confidence 147889999999997 6 999999887641 123588885 79999999854 55544
Q ss_pred c-cCCcEEEEccccccCCCceeccCHHHHHHHHHHcCCCEEEEeccCCccccccccccccccCCHHHHHHHHHhcCCCCe
Q 018490 258 K-ERSDIIITPVIKQLLPKFTLVSGQEDAVKLAKLLHAKFIVPMKNGDLDSKGFLASIIQSEGTVESFKELLSKELPDAQ 336 (355)
Q Consensus 258 ~-~~~Dl~~l~~g~~~~~~~~~h~~~~ea~~~~~~l~~k~~ip~H~~~f~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (355)
. .++|++++++.. +.+ ...|++++||+++++++++|+++++|++... +.+++.+ +...++.
T Consensus 220 ~~~~~Dlli~e~~~-~~~-~~~H~~~~~a~~~~~~~~~k~lvl~H~~~~~-------------~~~~~~~---~~~~~v~ 281 (293)
T 3md7_A 220 YIKDADVLIIGALQ-YRP-HPSHFSLGEALEWIEKLSPKRAILTHMHVPL-------------DYETVMR---ETPHHVE 281 (293)
T ss_dssp HHTTCSEEEEECCC-SSC-BTTBCCHHHHHHHHHHHCCSEEEEESBCTTC-------------CHHHHHH---HSCTTEE
T ss_pred HhcCCCEEEEeCcc-CCC-CCCCCCHHHHHHHHHHcCCCEEEEECCCCCC-------------CHHHHHh---hcCCCcE
Confidence 4 389999999853 222 2359999999999999999999999998631 2233332 2223444
Q ss_pred EeccCCCCeEEcC
Q 018490 337 LLEPTPGEPLEIP 349 (355)
Q Consensus 337 ~~~p~~Ge~~~l~ 349 (355)
+ ..+|+++++.
T Consensus 282 ~--a~DG~~i~l~ 292 (293)
T 3md7_A 282 P--GYDGLRFEVA 292 (293)
T ss_dssp E--CCTTCEEEEC
T ss_pred E--eeCCcEEEec
Confidence 4 5599999874
No 11
>3g1p_A Protein PHNP; C-P lyase, phosphodiesterase, phosphonate utilization, alkylphosphonate uptake; 1.40A {Escherichia coli} PDB: 3p2u_A
Probab=99.85 E-value=1.6e-20 Score=173.14 Aligned_cols=176 Identities=15% Similarity=0.137 Sum_probs=130.5
Q ss_pred cCcEEEEEeCCeEEEEccccCCCCCCCcccccccCccccchhhhhhhccccCCCCCCCCCcCEEEecCCCCCCCChhhHH
Q 018490 85 EGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQIVLIGMKTLVQLSDLPQVDCLLITQSLDDHCHLKTLK 164 (355)
Q Consensus 85 Ghss~li~~~g~~iLiDP~~sg~~~~p~~~~~~g~~~r~~~~~~~~~g~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~ 164 (355)
.++|++|+.++.+||||| |... + .. .+.. .++|+|||||.|+|| ..++.
T Consensus 38 ~~s~~li~~~~~~iLiD~---G~~~-----~--------~~----------~~~~---~~id~IliTH~H~DH--i~gl~ 86 (258)
T 3g1p_A 38 QPCSGVVKFNDAITLIDA---GLHD-----L--------AD----------RWSP---GSFQQFLLTHYHMDH--VQGLF 86 (258)
T ss_dssp CBSEEEEEETTEEEEECC---CCTT-----H--------HH----------HCCT---TSSCEEECSCCCHHH--HGGGT
T ss_pred cCceEEEEECCcEEEEEC---CchH-----H--------Hh----------hcCc---ccCCEEEEccCchhH--hCCHH
Confidence 468999999999999999 4211 1 01 0112 379999999999999 46666
Q ss_pred HhhhcC-CCceEEEcCChH---HHHhhcC-Cc-eEEcCCCceEEeCcccCCceEEEEEecCccCCCCCCCccEEEEEecC
Q 018490 165 PLSKMS-PNLKVIATPNAK---TLLDPLF-QN-VTYVEPGQSSEIEGRNGSKLRVKATAGPVLGPPWQRPENGYLVNSSQ 238 (355)
Q Consensus 165 ~l~~~~-~~~~v~~~~~~~---~~l~~~~-~~-v~~l~~~e~~~l~~~~~~~l~i~~~pa~~~g~~~~~~~~g~~i~~~~ 238 (355)
.+.... .++++|+++... ..++..+ .+ ..++++|+.++++ +++|+++++.|+. ...||+|+.+
T Consensus 87 ~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g-----~~~v~~~~~~H~~-----~~~g~~i~~~- 155 (258)
T 3g1p_A 87 PLRWGVGDPIPVYGPPDEQGCDDLFKHPGLLDFSHTVEPFVVFDLQ-----GLQVTPLPLNHSK-----LTFGYLLETA- 155 (258)
T ss_dssp TTTTCSSSCEEEEECCCSSCSTTTTTSCTTEEEEEECCTTCCEEET-----TEEEEEEECCSSS-----CCEEEEEECS-
T ss_pred HHhccCCCCeEEEeChhhhhHHHHhcCCCccccccccCCCCeEEEC-----CEEEEEEECCCCC-----CceEEEEEeC-
Confidence 665432 248899988766 3333222 22 3688999999998 8999999988752 2469999976
Q ss_pred CceeEEEcCCCCCCcc-ccc-c--cCCcEEEEccccccCCC--ceeccCHHHHHHHHHHcCCCEEEEeccCC
Q 018490 239 GQLTLYYEPHCVYNQN-FLE-K--ERSDIIITPVIKQLLPK--FTLVSGQEDAVKLAKLLHAKFIVPMKNGD 304 (355)
Q Consensus 239 ~~~~i~~sGDt~~~~~-~~~-~--~~~Dl~~l~~g~~~~~~--~~~h~~~~ea~~~~~~l~~k~~ip~H~~~ 304 (355)
+.+++|+||+++.+. +.+ . .++|++++++.. .... ...||+++||+++++++++|+++++|++.
T Consensus 156 -~~~i~~~GDt~~~~~~~~~~l~~~~~Dlli~e~t~-~~~~~~~~~H~~~~~a~~~~~~~~~k~lil~H~s~ 225 (258)
T 3g1p_A 156 -HSRVAWLSDTAGLPEKTLKFLRNNQPQVMVMDCSH-PPRADAPRNHCDLNTVLALNQVIRSPRVILTHISH 225 (258)
T ss_dssp -SCEEEEECSCSSCCHHHHHHHHHTCCSEEEEECCB-SSCSSCCSSSCBHHHHHHHHHHHCCSCEEEESCCH
T ss_pred -CcEEEEECCCCCCCHHHHHHHHhCCCCEEEEeCCC-CCccccCCCCCCHHHHHHHHHHcCCCEEEEECccC
Confidence 689999999998764 222 3 489999999842 1111 23599999999999999999999999985
No 12
>2e7y_A TRNAse Z; tRNA maturation, metallo-beta-lactaMSe, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.97A {Thermotoga maritima} SCOP: d.157.1.7 PDB: 1ww1_A
Probab=99.84 E-value=4.4e-20 Score=171.04 Aligned_cols=217 Identities=15% Similarity=0.147 Sum_probs=146.8
Q ss_pred ecCcEEEEEeCCeEEEEccccCCCCCCCcccccccCccccchhhhhhhccccCCCCCCCCCcCEEEecCCCCCCCChhhH
Q 018490 84 LEGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQIVLIGMKTLVQLSDLPQVDCLLITQSLDDHCHLKTL 163 (355)
Q Consensus 84 lGhss~li~~~g~~iLiDP~~sg~~~~p~~~~~~g~~~r~~~~~~~~~g~~~~~~~~~lp~iD~VlISH~H~DHld~~tl 163 (355)
.|.++..+.+++..||||| |... . + .+. .+..++|+|||||.|.||+ .++
T Consensus 8 ~g~~~~~~~i~~~~iLiD~---G~~~---~-------~---~l~------------~~~~~i~~IliTH~H~DH~--~gl 57 (280)
T 2e7y_A 8 KALFSTWIYYSPERILFDA---GEGV---S-------T---TLG------------SKVYAFKYVFLTHGHVDHI--AGL 57 (280)
T ss_dssp ETTTEEEEEEGGGTEEEEE---CTTH---H-------H---HHG------------GGGGGCCEEECSCCCHHHH--TTH
T ss_pred cCCceEEEEECCcEEEEEC---Ccch---H-------H---Hhc------------cCccCCCEEEEeCCchhHH--CCH
Confidence 4665555555788999999 5321 0 0 111 1223789999999999995 555
Q ss_pred HHhh---h-----cCCCceEEEcCChHHHHhhc------------C-CceEEcCCCceEEeCcccCCceEEEEEecCccC
Q 018490 164 KPLS---K-----MSPNLKVIATPNAKTLLDPL------------F-QNVTYVEPGQSSEIEGRNGSKLRVKATAGPVLG 222 (355)
Q Consensus 164 ~~l~---~-----~~~~~~v~~~~~~~~~l~~~------------~-~~v~~l~~~e~~~l~~~~~~~l~i~~~pa~~~g 222 (355)
..|. + +.+++++|+++... .++.. . .+++++++|+++++++..+.+++|+++|+.|+.
T Consensus 58 ~~l~~~~~~~~~~~~~~~~v~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~v~~~~~~H~~ 136 (280)
T 2e7y_A 58 WGVVNIRNNGMGDREKPLDVFYPEGNR-AVEEYTEFIKRANPDLRFSFNVHPLKEGERVFLRNAGGFKRYVQPFRTKHVS 136 (280)
T ss_dssp HHHHHHHHHHSGGGCCCEEEEEETTCH-HHHHHHHHHHHHCGGGTTTEEEEEECTTCCEECCCSSCSCEEEEEEECCSCS
T ss_pred HHHHHHHHHhccCCCCCCEEEECccHH-HHHHHHHHHhhcccCCCCceEEEEcCCCCEEEeCCcccCCEEEEEEEccCCC
Confidence 5442 1 12358999988776 55432 1 257889999999886100006999999987642
Q ss_pred CCCCCCccEEEEEec-----------------------C--------CceeEEEcCCCCCCcccccc-cCCcEEEEcccc
Q 018490 223 PPWQRPENGYLVNSS-----------------------Q--------GQLTLYYEPHCVYNQNFLEK-ERSDIIITPVIK 270 (355)
Q Consensus 223 ~~~~~~~~g~~i~~~-----------------------~--------~~~~i~~sGDt~~~~~~~~~-~~~Dl~~l~~g~ 270 (355)
. ....||+|+.. + .+.+|+|+|||++. +.+. .++|++++++..
T Consensus 137 ~---~~~~g~~i~~~~~~l~~~~~g~~~~~~~~l~~~~g~~~~~~~~~g~~i~ysgDt~~~--~~~~~~~~d~li~e~t~ 211 (280)
T 2e7y_A 137 S---EVSFGYHIFEVRRKLKKEFQGLDSKEISRLVKEKGRDFVTEEYHKKVLTISGDSLAL--DPEEIRGTELLIHECTF 211 (280)
T ss_dssp S---SCCEEEEEEEEEEEECGGGTTCCHHHHHHHHHHHCTGGGEEEEEEEEEEECCSCSSC--CHHHHTTCSCEEEECCB
T ss_pred C---CceEEEEEEEcccccCHhhcCCCHHHHHHHHhhcCCceecCCccCCEEEEECCCChH--HHHhhcCCCEEEEeCCc
Confidence 1 11468998641 0 15689999999987 3333 389999999853
Q ss_pred ccCCC---ceeccCHHHHHHHHHHcCCCEEEEeccCCccccccccccccccCCHHHHHHHHHhcCCCCeEeccCCCCeEE
Q 018490 271 QLLPK---FTLVSGQEDAVKLAKLLHAKFIVPMKNGDLDSKGFLASIIQSEGTVESFKELLSKELPDAQLLEPTPGEPLE 347 (355)
Q Consensus 271 ~~~~~---~~~h~~~~ea~~~~~~l~~k~~ip~H~~~f~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~Ge~~~ 347 (355)
..+. ...||+++||+++++++++++++++|++... ..+++++.+.+++...++++..+.+|++++
T Consensus 212 -~~~~~~~~~~H~t~~~a~~~~~~~~~~~lvl~H~~~~~-----------~~~~~~~~~~~~~~~~~~~v~~a~~G~~~~ 279 (280)
T 2e7y_A 212 -LDARDRRYKNHAAIDEVMESVKAAGVKKVILYHISTRY-----------IRQLKSVIKKYREEMPDVEILYMDPRKVFE 279 (280)
T ss_dssp -C--------CCCBHHHHHHHHHHHTCCEEEEESCCGGG-----------HHHHHHHHHHHHHHCTTSEEEECCTTSCEE
T ss_pred -CChhhHHhcCCCCHHHHHHHHHHcCCCEEEEEeecCcC-----------cchHHHHHHHHHHhCCCceEEEeCCCceee
Confidence 2211 2359999999999999999999999998621 224666776666655578888899999987
Q ss_pred c
Q 018490 348 I 348 (355)
Q Consensus 348 l 348 (355)
+
T Consensus 280 ~ 280 (280)
T 2e7y_A 280 M 280 (280)
T ss_dssp C
T ss_pred C
Confidence 5
No 13
>3jxp_A Coenzyme PQQ synthesis protein B; alpha-beta protein, PQQ biosynthesis, transport, biosyntheti; 2.20A {Pseudomonas putida} SCOP: d.157.1.6 PDB: 1xto_A
Probab=99.79 E-value=3.3e-19 Score=169.84 Aligned_cols=225 Identities=15% Similarity=0.101 Sum_probs=151.8
Q ss_pred cCcEEEEEeCCeE-EEEccccCCCCCCCcccccccCccccchhhhhhhccccCCCCCCCCCcCEEEecCCCCCCCChhhH
Q 018490 85 EGNSWLWDLDGVK-VLVDPILVGNLDFGIPWLFDAGKKFLKSFQIVLIGMKTLVQLSDLPQVDCLLITQSLDDHCHLKTL 163 (355)
Q Consensus 85 Ghss~li~~~g~~-iLiDP~~sg~~~~p~~~~~~g~~~r~~~~~~~~~g~~~~~~~~~lp~iD~VlISH~H~DHld~~tl 163 (355)
.++|++|+.+|.+ ||||+ |... . ..+ .+...+. +.. --++.+||+|||||.|+|| ..++
T Consensus 40 ~~ss~li~~~~~~~iLiD~---G~~~-~-~~l-----~~~~~l~-------~~~-~~~~~~i~~i~lTH~H~DH--~~gl 99 (321)
T 3jxp_A 40 TQSSIALSDDGVHWILCNA---SPDI-R-AQL-----QAFAPMQ-------PAR-ALRDTGINAIVLLDSQIDH--TTGL 99 (321)
T ss_dssp CBCEEEEESSSSSEEEECC---CTTH-H-HHH-----HTCGGGC-------CCS-SSSCCSEEEEECSCCCHHH--HGGG
T ss_pred cceEEEEEeCCceEEEEeC---CchH-H-HHH-----Hhccccc-------ccc-cCCcccCCEEEECCCChhh--hhhH
Confidence 6789999998886 99999 6321 0 001 0000000 000 0134589999999999999 5788
Q ss_pred HHhhhcCCCceEEEcCChHHHHhhc----------C--CceEEcCCCceEEe---CcccCCceEEEEEecCccCCCC--C
Q 018490 164 KPLSKMSPNLKVIATPNAKTLLDPL----------F--QNVTYVEPGQSSEI---EGRNGSKLRVKATAGPVLGPPW--Q 226 (355)
Q Consensus 164 ~~l~~~~~~~~v~~~~~~~~~l~~~----------~--~~v~~l~~~e~~~l---~~~~~~~l~i~~~pa~~~g~~~--~ 226 (355)
..|.+.. +++||+++...+.++.. . .++++++.++++++ + +++|++++..|.-+.+ +
T Consensus 100 ~~l~~~~-~~~vy~~~~~~~~l~~~~~~f~~~~~~~~~i~~~~i~~g~~~~i~~~~-----~~~V~~~~v~H~~~~~~~H 173 (321)
T 3jxp_A 100 LSLREGC-PHQVWCTDMVHQDLTTGFPLFNMLSHWNGGLQWNRIELEGSFVIDACP-----NLKFTPFPLRSAAPPYSPH 173 (321)
T ss_dssp GGGGGGC-CEEEEECHHHHHHTTTTSCHHHHHTTTTTCEEEEECCSSSCEECTTST-----TEEEEEEEECCCCCTTCTT
T ss_pred HHHHhcC-CCeEEECHHHHHHHHhhCccccccccccCceeEEEcCCCCeEEeccCC-----CeEEEEEEecCCccccccc
Confidence 7776553 78999998887766531 1 24678888999998 6 8999999987431110 1
Q ss_pred ------CCccEEEEE--ecCCceeEEEcCCCCCCc-ccccc-cCCcEEEEccccccCC------------CceeccCHH-
Q 018490 227 ------RPENGYLVN--SSQGQLTLYYEPHCVYNQ-NFLEK-ERSDIIITPVIKQLLP------------KFTLVSGQE- 283 (355)
Q Consensus 227 ------~~~~g~~i~--~~~~~~~i~~sGDt~~~~-~~~~~-~~~Dl~~l~~g~~~~~------------~~~~h~~~~- 283 (355)
....||+|+ .+ +++++|+||+++.+ .+.+. .++|++++++.-.... ....|++.+
T Consensus 174 ~~~~~~~~~~Gy~i~~~~~--g~~i~y~~Dt~~~~~~~~~~~~~~D~li~eat~~~d~e~~~~glk~r~~~~~gH~s~~~ 251 (321)
T 3jxp_A 174 RFDPHPGDNLGLMVEDTRT--GGKLFYAPGLGQVDEKLLAMMHGADCLLVDGTLWEDDEMQRRGVGTRTGREMGHLAQNG 251 (321)
T ss_dssp TTSCCTTSEEEEEEEETTT--CCEEEEESSCCCCCHHHHHHHHHCSEEEEECCCSSTTHHHHHTSCSCCCC-CCCCCSSS
T ss_pred cccccCCCcEEEEEEecCC--CcEEEEECCCCCCCHHHHHHhcCCCEEEEeCCCCCcHHHhhccccccccCCCcccCCCC
Confidence 235699998 44 78999999999753 44443 3799999998432211 112488877
Q ss_pred --HHHHHHHHcCCCEEEEeccCCccccccccccccccCCHHHHHHHHHhcCCCCeEeccCCCCeEEcCC
Q 018490 284 --DAVKLAKLLHAKFIVPMKNGDLDSKGFLASIIQSEGTVESFKELLSKELPDAQLLEPTPGEPLEIPA 350 (355)
Q Consensus 284 --ea~~~~~~l~~k~~ip~H~~~f~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~Ge~~~l~~ 350 (355)
||+++++++++|+++++|++.-.. .+....++.++... .++.+.. +|+++++-.
T Consensus 252 ~~eA~~~a~~~~~k~lvLtH~s~~np--------~l~~~~~e~~~~~~---~~v~~A~--DGm~i~~~~ 307 (321)
T 3jxp_A 252 PGGTLEVLDGFPRQRKVLIHINNTNP--------ILDENSPERAEVLR---RGVEVAF--DGMSIELLE 307 (321)
T ss_dssp TTCHHHHHTTCSSSEEEEESBCTTCG--------GGSTTCHHHHHHHH---TTEEECC--TTCEEEEC-
T ss_pred HHHHHHHHHhCCCCeEEEEEeCCCCc--------ccccchHHHHHhhc---CCcEEec--CCcEEEehh
Confidence 999999999999999999985431 13444445555432 3666766 999998754
No 14
>2ycb_A Beta-CAsp RNAse, cleavage and polyadenylation specificity factor; hydrolase, KH, metallo-beta-lactamase; 3.10A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=99.71 E-value=1.4e-17 Score=172.31 Aligned_cols=254 Identities=14% Similarity=0.095 Sum_probs=160.2
Q ss_pred ccCC--CCCCCCChhhhhhhcccccCCCCCCCceeCCCCCCCCCC-Ccc--cccCCC-CCCccccccccccccc---CCC
Q 018490 7 CNTL--PFSCLPSRRSRTRTTDIILSALSKTPRFTSACRSSVPIH-PTA--FNFPTR-RFSKVVSALVSEENAV---ATD 77 (355)
Q Consensus 7 ~~~~--~~g~~~~~~~~~~~~~~~~s~~~~~~~f~n~~~~~~~~~-~~~--~~~~~~-~p~~~~p~~~~~~~~~---~~~ 77 (355)
...| .||+. +.+++++.+ +++|+.+.|+.+.-+ ... ... +++... .....++.+..+.... ..+
T Consensus 106 ~~~p~~~~g~~--~~~~~~i~~---~~~~~~~~~~~p~~~--~~~~~~i~~~l~~~~~~~~~~l~~i~~~i~~~~~~~~~ 178 (636)
T 2ycb_A 106 ARKPGLVIGKY--GSTSREIVK---NTGWAPKILRTPPIS--SEIIERIRRTLRKNSKERKKILQQLGNRIHQKPKYDND 178 (636)
T ss_dssp ESCTHHHHCTT--SHHHHHHHH---HHCCEEEEEECCSSC--CHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCSSCCC
T ss_pred ECCCCcccccc--chhHHHHhh---ccCCccceeecCCcc--hhHHHHHHHHHHhhhHHHHHHHHHhhhccccccCCCCC
Confidence 3455 68887 789999999 999999999843211 101 111 222211 1113344333332221 346
Q ss_pred ceEEEEec------CcEEEEEeCCeEEEEccccCCCCCCCcccccccCccccchhhhhhhccccCCC--CCCCCCcCEEE
Q 018490 78 VFKLTYLE------GNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQIVLIGMKTLVQ--LSDLPQVDCLL 149 (355)
Q Consensus 78 ~~~itwlG------hss~li~~~g~~iLiDP~~sg~~~~p~~~~~~g~~~r~~~~~~~~~g~~~~~~--~~~lp~iD~Vl 149 (355)
.|+|++|| +||++|+.++.+|||||.++. .. . . + .. .+ +.+. ..+..+||+|+
T Consensus 179 ~m~i~~LG~~~evg~s~~lI~~~~~~ILID~G~~~-~~---~-~--~-~~---~~--------~~l~~l~~~~~~Id~Vl 239 (636)
T 2ycb_A 179 WARLTAMGGFREVGRSCLYLQTPNSRVLLDCGVNV-AG---G-D--D-KN---SY--------PYLNVPEFTLDSLDAVI 239 (636)
T ss_dssp CCEEEEEESSSSSSCCEEEEECSSCEEEEEECCCC-SS---C-C--H-HH---HS--------CCTTSTTCCTTTCCEEE
T ss_pred eEEEEEEecCCCCCCCEEEEEECCeEEEEeCCCCc-cc---c-c--c-hh---hc--------cccccccCCcccCcEEE
Confidence 79999996 789999999999999995531 10 0 0 0 00 00 0111 13455899999
Q ss_pred ecCCCCCCCChhhHHHhhhcCCCceEEEcCChHHHHhhc----------------C---------CceEEcCCCceEEe-
Q 018490 150 ITQSLDDHCHLKTLKPLSKMSPNLKVIATPNAKTLLDPL----------------F---------QNVTYVEPGQSSEI- 203 (355)
Q Consensus 150 ISH~H~DHld~~tl~~l~~~~~~~~v~~~~~~~~~l~~~----------------~---------~~v~~l~~~e~~~l- 203 (355)
|||.|.|| .+.+..|.+...++++|+++.+...++.. + .++..+++++.+++
T Consensus 240 LTH~H~DH--iGglp~L~~~~~~~~Iy~t~~t~~l~~~~l~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~g~~~~l~ 317 (636)
T 2ycb_A 240 ITHAHLDH--SGFLPYLYHYGYDGPVYCTAPTRDLMTLLQLDHIDIAHREDEPLPFNVKHVKKSVKHTITLDYGEVTDIA 317 (636)
T ss_dssp CSSSSHHH--HTTHHHHHHTTCCSCEEECHHHHHHHHHHHHHHHHHHHHHTCCCSCCHHHHHHHHHTEEECCTTCCEEEE
T ss_pred ECCCChHH--hcCHHHHHhcCCCCeEEEcchHHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHhceEEeCCCCEEEec
Confidence 99999999 57888887622478999998876543210 0 14688999999999
Q ss_pred CcccCCceEEEEEecCccCCCCCCCccEEEEEecCCce--eEEEcCCCCCCcc--cc----cccCCcEEEEccccccCCC
Q 018490 204 EGRNGSKLRVKATAGPVLGPPWQRPENGYLVNSSQGQL--TLYYEPHCVYNQN--FL----EKERSDIIITPVIKQLLPK 275 (355)
Q Consensus 204 ~~~~~~~l~i~~~pa~~~g~~~~~~~~g~~i~~~~~~~--~i~~sGDt~~~~~--~~----~~~~~Dl~~l~~g~~~~~~ 275 (355)
+ +++|++.++.|.. ..++|+++.+ +. +++|+||+++... +. ...++|++++++.. ...
T Consensus 318 g-----gi~v~~~~~gH~~-----Gs~~~~i~~~--~~~~~ilftGD~~~~~~~ll~~~~~~~~~~D~LI~EsT~--~~~ 383 (636)
T 2ycb_A 318 P-----DIRLTLHNAGHIL-----GSAMAHLHIG--DGQHNMVYTGDFKYEQSRLLEAAANRFPRIETLVMESTY--GGH 383 (636)
T ss_dssp T-----TEEEEEEECCSST-----TCEEEEEEET--TTTTCEEECCSCCSSCCSSSCCCCCCCSCCSEEEEECTT--CSG
T ss_pred C-----CeEEEEeCCCCCC-----CcEEEEEEEC--CCeEEEEEECCCCCCcccccCCcccCCCCCeEEEECCCC--CCC
Confidence 6 8999887765531 1468999887 45 8999999988653 22 23489999999742 111
Q ss_pred ceecc----CHHHHHHHHHH---cCCCEEEEecc
Q 018490 276 FTLVS----GQEDAVKLAKL---LHAKFIVPMKN 302 (355)
Q Consensus 276 ~~~h~----~~~ea~~~~~~---l~~k~~ip~H~ 302 (355)
...|. ..++..+.+++ .+.+.++|+|-
T Consensus 384 ~~~h~s~~~~~~~l~~~i~~~~~~~g~vlIp~fa 417 (636)
T 2ycb_A 384 EDVQPSRNRAEKELVKTIYSTLRRGGKILIPVFA 417 (636)
T ss_dssp GGCCCCHHHHHHHHHHHHHHHHHHTCCEEEECCT
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEECC
Confidence 11122 23444444444 58899999974
No 15
>3iek_A Ribonuclease TTHA0252; metallo beta lactamase fold, endonuclease, hydrolase, metal- nuclease, RNA-binding, rRNA processing; HET: FLC; 2.05A {Thermus thermophilus} SCOP: d.157.1.10 PDB: 2dkf_A* 3iel_A* 3iem_A* 2zdf_A* 3idz_A* 2zdd_A* 3ie0_A* 2zde_A* 3ie1_A* 2zdw_A* 3a4y_A* 2yvd_A* 3ie2_A*
Probab=99.66 E-value=1.3e-15 Score=150.70 Aligned_cols=188 Identities=15% Similarity=0.069 Sum_probs=126.8
Q ss_pred eEEEEecC------cEEEEEeCCeEEEEccccCCCCCCCcccccccCccccchhhhhhhccccCCCCCCCCCcCEEEecC
Q 018490 79 FKLTYLEG------NSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQIVLIGMKTLVQLSDLPQVDCLLITQ 152 (355)
Q Consensus 79 ~~itwlGh------ss~li~~~g~~iLiDP~~sg~~~~p~~~~~~g~~~r~~~~~~~~~g~~~~~~~~~lp~iD~VlISH 152 (355)
|+|++||. ||++|+.++.+|||||.+. +.... .+.+.. + ..+..+||+|+|||
T Consensus 1 M~i~~LG~~~~vg~s~~li~~~~~~iLID~G~~-----~~~~~----~~~~~~-----------~-~~~~~~Id~VllTH 59 (431)
T 3iek_A 1 MRIVPFGAAREVTGSAHLLLAGGRRVLLDCGMF-----QGKEE----ARNHAP-----------F-GFDPKEVDAVLLTH 59 (431)
T ss_dssp CEEEECSCSSSSSCCCEEEEETTEEEEECCCCC-----CGGGG----GGGGSC-----------C-SSCGGGCCEEECSC
T ss_pred CEEEEeCCCCCCCCcEEEEEECCeEEEEeCCCC-----cchhh----ccchhh-----------c-CCCcccCCEEEECC
Confidence 68999986 8999999999999999441 11100 000111 1 12334899999999
Q ss_pred CCCCCCChhhHHHhhhcCCCceEEEcCChHHHHhhc--------C-------------CceEEcCCCceEEeCcccCCce
Q 018490 153 SLDDHCHLKTLKPLSKMSPNLKVIATPNAKTLLDPL--------F-------------QNVTYVEPGQSSEIEGRNGSKL 211 (355)
Q Consensus 153 ~H~DHld~~tl~~l~~~~~~~~v~~~~~~~~~l~~~--------~-------------~~v~~l~~~e~~~l~~~~~~~l 211 (355)
.|.|| .+.+..|.+...+.++|+++.+...++.+ . .++..+++++.++++ ++
T Consensus 60 ~H~DH--~gglp~l~~~~~~~~Iy~t~~t~~l~~~~l~d~~~~~~~~~y~~~~~~~~~~~~~~l~~~~~~~l~-----g~ 132 (431)
T 3iek_A 60 AHLDH--VGRLPKLFREGYRGPVYATRATVLLMEIVLEDALKVMDEPFFGPEDVEEALGHLRPLEYGEWLRLG-----AL 132 (431)
T ss_dssp CCHHH--HTTHHHHHHTTCCSCEEECHHHHHHHHHHHHHHHHHCSSCSSCHHHHHHHHHTEEECCTTCCEEET-----TE
T ss_pred CChHH--hccHHHHHHcCCCCeEEEcHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHhccEEcCCCCeEEeC-----CE
Confidence 99999 58888887654478999998877644421 0 358899999999997 89
Q ss_pred EEEEEecCccCCCCCCCccEEEEEecCCceeEEEcCCCCCCcccc-----cccCCcEEEEccccccCCCc-eeccCHHH-
Q 018490 212 RVKATAGPVLGPPWQRPENGYLVNSSQGQLTLYYEPHCVYNQNFL-----EKERSDIIITPVIKQLLPKF-TLVSGQED- 284 (355)
Q Consensus 212 ~i~~~pa~~~g~~~~~~~~g~~i~~~~~~~~i~~sGDt~~~~~~~-----~~~~~Dl~~l~~g~~~~~~~-~~h~~~~e- 284 (355)
+|+++++.|+. ..++|.|+.+ +.+|+|+||+++..... ...++|++++++.- ..+.. ......++
T Consensus 133 ~v~~~~agH~~-----Gs~~~~i~~~--~~~ilfsGD~~~~~~~~l~~~~~~~~~D~LI~EsTy-~~~~h~~~~~~~~~l 204 (431)
T 3iek_A 133 SLAFGQAGHLP-----GSAFVVAQGE--GRTLVYSGDLGNREKDVLPDPSLPPLADLVLAEGTY-GDRPHRPYRETVREF 204 (431)
T ss_dssp EEEEEECCSST-----TCEEEEEEET--TEEEEECCCCCCTTSSSSCCCCBCCCCSEEEEECTT-TTCCCCCHHHHHHHH
T ss_pred EEEEEeCCCCc-----CceEEEEEEC--CEEEEEeCCCCCCCCcccCCccccCCccEEEEEccc-CCcCCCChHHHHHHH
Confidence 99999876531 2468899886 68999999999865422 12389999999852 11111 10111222
Q ss_pred --HHHHHHHcCCCEEEEecc
Q 018490 285 --AVKLAKLLHAKFIVPMKN 302 (355)
Q Consensus 285 --a~~~~~~l~~k~~ip~H~ 302 (355)
+++.+.+.+.+.+||++-
T Consensus 205 ~~~i~~~~~~gg~vlIp~fa 224 (431)
T 3iek_A 205 LEILEKTLSQGGKVLIPTFA 224 (431)
T ss_dssp HHHHHHHHHTTCEEEEECCT
T ss_pred HHHHHHHHHcCCeEEEEecc
Confidence 233333457788888864
No 16
>2xr1_A Cleavage and polyadenylation specificity factor 1 subunit; hydrolase, metallo-beta-lactamase, beta-CAsp, RNA processing; 2.59A {Methanosarcina mazei}
Probab=99.66 E-value=1e-16 Score=165.81 Aligned_cols=253 Identities=11% Similarity=0.064 Sum_probs=153.4
Q ss_pred ccCC--CCCCCCChhhhhhhcccccCCCCCCCceeCCCCCCCCCC---Ccc--cccCCC-CCCccccccccccc---ccC
Q 018490 7 CNTL--PFSCLPSRRSRTRTTDIILSALSKTPRFTSACRSSVPIH---PTA--FNFPTR-RFSKVVSALVSEEN---AVA 75 (355)
Q Consensus 7 ~~~~--~~g~~~~~~~~~~~~~~~~s~~~~~~~f~n~~~~~~~~~---~~~--~~~~~~-~p~~~~p~~~~~~~---~~~ 75 (355)
...| .||+. +++++++.+ +++|..+.|+-+. ... ... +++... .....++.+..+.. ...
T Consensus 110 ~~~~~~~~g~~--~~~~~~i~~---~~~~~~~~~~~p~----~~~~~~~~i~~~l~~~~~~~~~~l~~i~~~i~~~~~~~ 180 (640)
T 2xr1_A 110 AEKPGLVIGKH--GATLREITK---QIGWIPKVVRTPP----IKSRTVKNIREFMRNNLKERKEILKTVGRKIHRECTSK 180 (640)
T ss_dssp ESSHHHHHCSS--SHHHHHHHH---HHCSEEEEEECCS----SCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCCS
T ss_pred eCCCCcccccc--hhhHHHHHh---ccCcccccccCCC----cchhHHHHHHHHHHHhHHHHHHHHHHHhhhccCcccCC
Confidence 3445 78887 789999999 8999999998331 212 111 222211 00112332222211 123
Q ss_pred CCceEEEEec------CcEEEEEeCCeEEEEccccCCCCCCCcccccccCccccchhhhhhhccccCCCCCCCCCcCEEE
Q 018490 76 TDVFKLTYLE------GNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQIVLIGMKTLVQLSDLPQVDCLL 149 (355)
Q Consensus 76 ~~~~~itwlG------hss~li~~~g~~iLiDP~~sg~~~~p~~~~~~g~~~r~~~~~~~~~g~~~~~~~~~lp~iD~Vl 149 (355)
.+.|+|++|| +||++|+.++.+|||||.++... . . ..+..+. ....++..+||+|+
T Consensus 181 ~~~m~I~~LG~~~evg~s~~LI~~~~~~ILID~G~~~~~--~--~------~~l~~l~--------~~~~~~~~~Id~Vl 242 (640)
T 2xr1_A 181 DQWVRVTALGGCKEVGRSCFLLSTPESRILIDCGVNVGS--D--E------NMTPYLY--------VPEVFPLNQIDAVI 242 (640)
T ss_dssp CCCCEEEEEECSSSSBCCEEEEECSSCEEEECCCCBCSS--C--S------SCCCCTT--------STTTCSGGGCCEEE
T ss_pred CCceEEEEEecCCCCCCcEEEEEECCeEEEEeCCCCccc--c--c------ccccccc--------ccccCCcccCcEEE
Confidence 4679999998 89999999999999999553110 0 0 0000000 00011445899999
Q ss_pred ecCCCCCCCChhhHHHhhhcCCCceEEEcCChHHHHhhc----------------C---------CceEEcCCCceEEe-
Q 018490 150 ITQSLDDHCHLKTLKPLSKMSPNLKVIATPNAKTLLDPL----------------F---------QNVTYVEPGQSSEI- 203 (355)
Q Consensus 150 ISH~H~DHld~~tl~~l~~~~~~~~v~~~~~~~~~l~~~----------------~---------~~v~~l~~~e~~~l- 203 (355)
|||.|.|| .+.+..|.+...++++|+++.+...++.. . .++..+++++.+++
T Consensus 243 lTH~H~DH--iGgl~~L~~~~~~~~Iy~t~~t~~ll~~~l~d~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~g~~i~l~ 320 (640)
T 2xr1_A 243 VTHAHLDH--QGLVPLLFKYGYEGPVYCTPPTRDLMVLLQLDYIDVAAKEGKKIPYESGMVAKTLKHTIPLDYEEVTDIA 320 (640)
T ss_dssp CCSSCHHH--HTTHHHHHHTTCCSCEEECHHHHHHHHHHHHHHHHHHHHHTCCCCSCHHHHHHHHHTEEECCTTCCEEEE
T ss_pred ECCCChhh--hccHHHHHhcCCCCeEEECHHHHHHHHHHHHHHHHHhhhcccCCCCCHHHHHHHHhceEEeCCCCEEEec
Confidence 99999999 57888887622378999998766533210 0 14788999999999
Q ss_pred CcccCCceEEEEEecCccCCCCCCCccEEEEEecCCce--eEEEcCCCCCCcc--cc----cccCCcEEEEccccccCCC
Q 018490 204 EGRNGSKLRVKATAGPVLGPPWQRPENGYLVNSSQGQL--TLYYEPHCVYNQN--FL----EKERSDIIITPVIKQLLPK 275 (355)
Q Consensus 204 ~~~~~~~l~i~~~pa~~~g~~~~~~~~g~~i~~~~~~~--~i~~sGDt~~~~~--~~----~~~~~Dl~~l~~g~~~~~~ 275 (355)
+ +++|++.++.|.. ..++|.++.+ +. +++|+||+++... +. ...++|++++++.. ..+.
T Consensus 321 g-----g~~v~~~~~GH~~-----Gs~~~~i~~~--~~~~~ilftGD~~~~~~~ll~~~~~~~~~~DvLi~EsT~-g~~~ 387 (640)
T 2xr1_A 321 P-----DIKLTFHNAGHIL-----GSAISHFHIG--DGLHNVVFTGDYKYEKTRLFDPAVNKFPRVETVISEATY-GNAN 387 (640)
T ss_dssp T-----TEEEEEEECSSST-----TCEEEEEEET--TTTEEEEECCSCCSSCCSSCCCCCCBCSCCSEEEEECTT-CSTT
T ss_pred C-----CEEEEEEcCCCCc-----CcEEEEEEEC--CceEEEEEECCCCCCCccccccccccCCCCcEEEECCCC-CCCc
Confidence 6 8999887665531 2468889887 45 9999999988653 21 12389999998742 1111
Q ss_pred ceeccCH----HHHHHHHHH---cCCCEEEEecc
Q 018490 276 FTLVSGQ----EDAVKLAKL---LHAKFIVPMKN 302 (355)
Q Consensus 276 ~~~h~~~----~ea~~~~~~---l~~k~~ip~H~ 302 (355)
+ .|.+. ++..+.++. .+.+.+||+|-
T Consensus 388 ~-~h~s~~~~~~~l~~~i~~~~~~~g~vlIp~fa 420 (640)
T 2xr1_A 388 A-FQPALKDAEKHLQMVVKNTIERGGIAVIPAFA 420 (640)
T ss_dssp C-CCCCHHHHHHHHHHHC--------CEEEECCT
T ss_pred c-CCCCHHHHHHHHHHHHHHHHhcCCeEEEEecc
Confidence 0 13232 233333332 36788999875
No 17
>2az4_A Hypothetical protein EF2904; structural genomics, PSI, protein STR initiative, midwest center for structural genomics, MCSG, U function; 2.00A {Enterococcus faecalis} SCOP: d.157.1.10
Probab=99.65 E-value=7.4e-15 Score=144.77 Aligned_cols=209 Identities=11% Similarity=0.127 Sum_probs=129.9
Q ss_pred CceEEEEec------CcEEEEEeCCeEEEEccccCCCCCC--Cccc---ccccCccccchhhh---hhhccccCCCCCCC
Q 018490 77 DVFKLTYLE------GNSWLWDLDGVKVLVDPILVGNLDF--GIPW---LFDAGKKFLKSFQI---VLIGMKTLVQLSDL 142 (355)
Q Consensus 77 ~~~~itwlG------hss~li~~~g~~iLiDP~~sg~~~~--p~~~---~~~g~~~r~~~~~~---~~~g~~~~~~~~~l 142 (355)
+.|+|++|| .||++|+.++..|||||........ |... +. + ...+..+.. ..+.++..+-..+.
T Consensus 5 ~~m~i~~lG~~~~~g~n~~li~~~~~~iLiD~G~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~l~~~~~~~p~~~~~~~~ 82 (429)
T 2az4_A 5 AKTTVTFHSGILTIGGTVIEVAYKDAHIFFDFGTEFRPELDLPDDHIETLI-N-NRLVPELKDLYDPRLGYEYHGAEDKD 82 (429)
T ss_dssp CCEEEEEEECTTSSSCCEEEEEETTEEEEECCCCCCCTTCCCSCCCHHHHH-H-TTSSCCCSSCBCGGGCCCCCSSCCCC
T ss_pred CceEEEEeeCCCccCCeEEEEEECCeEEEEecCCCCCcccCCCcchhhhcc-C-CcccCCchhhhcccccccchhhhhcc
Confidence 358999997 5799999999999999954311000 0000 00 0 000000000 00000000001344
Q ss_pred CCcCEEEecCCCCCCCChhhHHHhhhcCCCceEEEcCChHHHHhhc-----------------CCceEEcCCCceEEeCc
Q 018490 143 PQVDCLLITQSLDDHCHLKTLKPLSKMSPNLKVIATPNAKTLLDPL-----------------FQNVTYVEPGQSSEIEG 205 (355)
Q Consensus 143 p~iD~VlISH~H~DHld~~tl~~l~~~~~~~~v~~~~~~~~~l~~~-----------------~~~v~~l~~~e~~~l~~ 205 (355)
.++|+|||||.|.|| .+.+..|.+ ++++|+++.....++.. ..++.+++.++.++++
T Consensus 83 ~~i~~v~lTH~H~DH--iggl~~l~~---~~~iy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g- 156 (429)
T 2az4_A 83 YQHTAVFLSHAHLDH--SRMINYLDP---AVPLYTLKETKMILNSLNRKGDFLIPSPFEEKNFTREMIGLNKNDVIKVG- 156 (429)
T ss_dssp CSEEEEECSCSCHHH--HTTGGGBCT---TSCEEEEHHHHHHHHHHTTTSCSSCCCTTSCTTCCCCCEEECTTCEEEET-
T ss_pred ccCCEEEECCchHHH--hCcHhHhcC---CCCEEECHHHHHHHHHHHHhCccccccccccccccceEEEeCCCCeEEEC-
Confidence 589999999999999 578877764 68999998876654432 1357889999999997
Q ss_pred ccCCceEEEEEecCccCCCCCCCccEEEEEecCCceeEEEcCCCCCCc-------cccccc-CCcEEEEccccccCCC--
Q 018490 206 RNGSKLRVKATAGPVLGPPWQRPENGYLVNSSQGQLTLYYEPHCVYNQ-------NFLEKE-RSDIIITPVIKQLLPK-- 275 (355)
Q Consensus 206 ~~~~~l~i~~~pa~~~g~~~~~~~~g~~i~~~~~~~~i~~sGDt~~~~-------~~~~~~-~~Dl~~l~~g~~~~~~-- 275 (355)
+++|+++++.|+.+ ...+|+|+.+ +.+++|+||+.+.. .+.+.. ++|++++++.....+.
T Consensus 157 ----~~~v~~~~~~H~~~----gs~~~~i~~~--~~~i~~tGD~~~~~~~~~~~~~~~~~~~~~d~Li~Est~~~~~~~~ 226 (429)
T 2az4_A 157 ----EISVEIVPVDHDAY----GASALLIRTP--DHFITYTGDLRLHGHNREETLAFCEKAKHTELLMMEGVSISFPERE 226 (429)
T ss_dssp ----TEEEEEEECCCSST----TCEEEEEEET--TEEEEECCSCCSSSTTHHHHHHHHHHHTTCSEEEEECCGGGSCCCC
T ss_pred ----CEEEEEEECCCCCh----hhEEEEEEeC--CcEEEECCCcccCCCchHHHHHHHHhccCCCEEEECCCCcCccccc
Confidence 89999998876322 2468999987 57999999997643 233333 8999999985322111
Q ss_pred ----ceeccCHHHHHHHHHHc---CCCEEEEeccC
Q 018490 276 ----FTLVSGQEDAVKLAKLL---HAKFIVPMKNG 303 (355)
Q Consensus 276 ----~~~h~~~~ea~~~~~~l---~~k~~ip~H~~ 303 (355)
...|++.+++.+.+.++ .+++++.+|..
T Consensus 227 ~~~~~~~~~s~~~~~~~i~~~~~~~~~rlil~h~~ 261 (429)
T 2az4_A 227 PDPAQIAVVSEEDLVQHLVRLELENPNRQITFNGY 261 (429)
T ss_dssp CCTTBCCCCSHHHHHHHHHHHHHTCSSSCEEEEEC
T ss_pred ccccCCCCCCHHHHHHHHHHHHHhCCCcEEEEEec
Confidence 12277887776655543 35555555644
No 18
>2i7t_A Cleavage and polyadenylation specificity factor 73 kDa subunit; metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination; 2.10A {Homo sapiens} SCOP: d.157.1.10 PDB: 2i7v_A
Probab=99.61 E-value=1.3e-14 Score=144.52 Aligned_cols=188 Identities=14% Similarity=0.157 Sum_probs=121.6
Q ss_pred CCceEEEEec------CcEEEEEeCCeEEEEccccCCCCCCCcccccccCccccchhhhhhhccccCCCCCCCCCcCEEE
Q 018490 76 TDVFKLTYLE------GNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQIVLIGMKTLVQLSDLPQVDCLL 149 (355)
Q Consensus 76 ~~~~~itwlG------hss~li~~~g~~iLiDP~~sg~~~~p~~~~~~g~~~r~~~~~~~~~g~~~~~~~~~lp~iD~Vl 149 (355)
.+.|+|++|| .||++|+.++.+|||||.+.. . .... +.+ + .+...+..+||+||
T Consensus 9 ~~~m~i~~LG~~~~vg~s~~li~~~~~~iLID~G~~~-~---~~~~-----~~~-~----------~l~~~~~~~Id~Vl 68 (459)
T 2i7t_A 9 SDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHP-G---LEGM-----DAL-P----------YIDLIDPAEIDLLL 68 (459)
T ss_dssp CEEEEEEEEESSSSSSSCEEEEEETTEEEEECCCCCT-T---SCGG-----GGS-C----------CGGGSCGGGCCEEE
T ss_pred CCeEEEEEEecCCCCCCCEEEEEECCeEEEEeCCCCc-C---cccc-----ccc-C----------cccccCcccCcEEE
Confidence 4568999998 689999999999999995431 1 0000 000 0 01112334799999
Q ss_pred ecCCCCCCCChhhHHHhhhcC-CCceEEEcCChHHHHhhc-------------------------CCceEEcCCCceEEe
Q 018490 150 ITQSLDDHCHLKTLKPLSKMS-PNLKVIATPNAKTLLDPL-------------------------FQNVTYVEPGQSSEI 203 (355)
Q Consensus 150 ISH~H~DHld~~tl~~l~~~~-~~~~v~~~~~~~~~l~~~-------------------------~~~v~~l~~~e~~~l 203 (355)
|||.|.|| .+.+..+..+. .+.++|+++.+...++.+ ..++..+++++++++
T Consensus 69 lTH~H~DH--~ggl~~l~~~~~~~~~iy~t~~t~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (459)
T 2i7t_A 69 ISHFHLDH--CGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADDMLYTETDLEESMDKIETINFHEVKEV 146 (459)
T ss_dssp CCCSSHHH--HTTHHHHHHHSSCCSEEEEEHHHHHHHHHHHHHHCC---------CCCHHHHHHHGGGEEEECTTCCEEE
T ss_pred ECCCChhh--hhhhHHHHHhcCCCCCEEechHHHHHHHHHHHHHHHHhcccccccccCHHHHHHHHhccEEeCCCCEEEE
Confidence 99999999 57888776542 157899987654422111 126788999999999
Q ss_pred CcccCCceEEEEEecCccCCCCCCCccEEEEEecCCceeEEEcCCCCCCccccc----c--cCCcEEEEccccccCCCce
Q 018490 204 EGRNGSKLRVKATAGPVLGPPWQRPENGYLVNSSQGQLTLYYEPHCVYNQNFLE----K--ERSDIIITPVIKQLLPKFT 277 (355)
Q Consensus 204 ~~~~~~~l~i~~~pa~~~g~~~~~~~~g~~i~~~~~~~~i~~sGDt~~~~~~~~----~--~~~Dl~~l~~g~~~~~~~~ 277 (355)
+ ++++++.++.|+. ..++|.|+.+ +.+++|+||+++...... . .++|++++++. |.. .
T Consensus 147 ~-----gi~v~~~~~GH~~-----Gs~~~~i~~~--~~~il~sGD~~~~~~~~~~~~~~~~~~~D~Li~Est--y~~--~ 210 (459)
T 2i7t_A 147 A-----GIKFWCYHAGHVL-----GAAMFMIEIA--GVKLLYTGDFSRQEDRHLMAAEIPNIKPDILIIEST--YGT--H 210 (459)
T ss_dssp T-----TEEEEEEECCSST-----TCEEEEEEET--TEEEEECCSCCCC-----CCCCCCSSCCSEEEEECT--TTT--C
T ss_pred C-----CEEEEEEeCCCcc-----CcEEEEEEEC--CcEEEEeCCCCCCCCcccCCCCcCCCCCeEEEECCC--CCC--C
Confidence 7 8999887665541 2468999887 679999999998765321 2 37999999984 221 1
Q ss_pred eccCHHH-------HHHHHHHcCCCEEEEec
Q 018490 278 LVSGQED-------AVKLAKLLHAKFIVPMK 301 (355)
Q Consensus 278 ~h~~~~e-------a~~~~~~l~~k~~ip~H 301 (355)
.|...++ +++...+.+.+.+||+-
T Consensus 211 ~~~~~~~~~~~l~~~i~~~~~~~g~vlip~f 241 (459)
T 2i7t_A 211 IHEKREEREARFCNTVHDIVNRGGRGLIPVF 241 (459)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred CCCChHHHHHHHHHHHHHHHHCCCEEEEEec
Confidence 2334333 22222334567777774
No 19
>3af5_A Putative uncharacterized protein PH1404; archaeal CPSF, beta-CAsp family, KH domain, ribonuclease, ME beta-lactamase superfamily, archaea; 2.60A {Pyrococcus horikoshii} PDB: 3af6_A*
Probab=99.58 E-value=5.2e-15 Score=153.41 Aligned_cols=224 Identities=13% Similarity=0.061 Sum_probs=140.9
Q ss_pred ccCC--CCCCCCChhhhhhhcccccCCCCCCCceeCCCCCCCCCC---Ccc--cccCCCC-CCccccccccccc---ccC
Q 018490 7 CNTL--PFSCLPSRRSRTRTTDIILSALSKTPRFTSACRSSVPIH---PTA--FNFPTRR-FSKVVSALVSEEN---AVA 75 (355)
Q Consensus 7 ~~~~--~~g~~~~~~~~~~~~~~~~s~~~~~~~f~n~~~~~~~~~---~~~--~~~~~~~-p~~~~p~~~~~~~---~~~ 75 (355)
...| .||+. +++++++.+ +++|..+.|+-+. ... ... +++.... ....+-.+..+.. ...
T Consensus 115 ~~~~~~~~g~~--~~~~~~i~~---~~~~~~~~~~~p~----~~~~~~~~i~~~l~~~~~~~~~~l~~~~~~i~~~~~~~ 185 (651)
T 3af5_A 115 AKKPGLVIGKN--GETLRLITQ---KVKWAPKVVRTPP----LQSQTIYSIRQILQTESKDRRKFLRQVGRNIYRKPEYK 185 (651)
T ss_dssp ESSTTTTSCTT--SHHHHHHHH---HHCSEEEEEECCS----SCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHTSSSCCC
T ss_pred ECCCCcccccc--chhHHHHhh---ccCcccccccCCC----CCchHHHHHHHHHHhhHHHHHHHHHHhccceecCCcCC
Confidence 3456 88887 789999999 8999999998331 112 111 2222100 0001101111111 123
Q ss_pred CCceEEEEec------CcEEEEEeCCeEEEEccccCCCCCCCcccccccCccccchhhhhhhccccCCCC--C--CC--C
Q 018490 76 TDVFKLTYLE------GNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQIVLIGMKTLVQL--S--DL--P 143 (355)
Q Consensus 76 ~~~~~itwlG------hss~li~~~g~~iLiDP~~sg~~~~p~~~~~~g~~~r~~~~~~~~~g~~~~~~~--~--~l--p 143 (355)
.+.|+|++|| +||++|+.++.+|||||.++. . .... + .. .+ +.+.. . +. .
T Consensus 186 ~~~m~i~~LG~~~~vg~s~~LI~~~~~~ILID~G~~~-~---~~~~--g-~~---~l--------~~l~~~~~g~~~~~~ 247 (651)
T 3af5_A 186 SRWIRITGLGGFREVGRSALLVQTDESFVLVDFGVNV-A---MLND--P-YK---AF--------PHFDAPEFQYVLREG 247 (651)
T ss_dssp CSCEEEEEEECSSSSSCCEEEEEESSCEEEECCCCCG-G---GTTC--H-HH---HS--------CCTTCHHHHHHHHTT
T ss_pred CCceEEEEEecCCCCCCcEEEEEECCcEEEEeCCCCh-h---cccc--c-hh---hc--------ccccchhhccCcccC
Confidence 4679999996 789999999999999994431 1 0000 0 00 00 01110 1 23 4
Q ss_pred CcCEEEecCCCCCCCChhhHHHhhhcC-CCceEEEcCChHHHHhhc----------------C---------CceEEcCC
Q 018490 144 QVDCLLITQSLDDHCHLKTLKPLSKMS-PNLKVIATPNAKTLLDPL----------------F---------QNVTYVEP 197 (355)
Q Consensus 144 ~iD~VlISH~H~DHld~~tl~~l~~~~-~~~~v~~~~~~~~~l~~~----------------~---------~~v~~l~~ 197 (355)
+||+|||||.|.|| .+.+..|.+.. .+++||+++.+...++.. + .++..+++
T Consensus 248 ~Id~VllTH~H~DH--iGglp~L~~~~~~~~pIy~t~~t~~ll~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 325 (651)
T 3af5_A 248 LLDAIIITHAHLDH--CGMLPYLFRYNLFDGPIYTTPPTRDLMVLLQKDFIEIQQSNGQDPLYRPRDIKEVIKHTITLDY 325 (651)
T ss_dssp CCCEEECSCSSHHH--HTTHHHHHHTTCCCSCEEECHHHHHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHTEEECCT
T ss_pred CCCEEEECCCChHh--hcCHHHHHhcCCCCceEEEcHHHHHHHHHHHHHHHHHhhhcccCCCCCHHHHHHhhhcEEEeCC
Confidence 79999999999999 57888777531 168999998776543210 0 14688999
Q ss_pred CceEEe-CcccCCceEEEEEecCccCCCCCCCccEEEEEecCCceeEEEcCCCCCCcc--cc----cccCCcEEEEccc
Q 018490 198 GQSSEI-EGRNGSKLRVKATAGPVLGPPWQRPENGYLVNSSQGQLTLYYEPHCVYNQN--FL----EKERSDIIITPVI 269 (355)
Q Consensus 198 ~e~~~l-~~~~~~~l~i~~~pa~~~g~~~~~~~~g~~i~~~~~~~~i~~sGDt~~~~~--~~----~~~~~Dl~~l~~g 269 (355)
++.+++ + +++|++.++.|.. ..++|.++.+++..+++|+||+++... +. ...++|++++++.
T Consensus 326 g~~~~l~g-----gi~v~~~~~gH~~-----Gs~~~~i~~~~~~~~ilftGD~~~~~~~ll~~~~~~~~~~DvLI~EsT 394 (651)
T 3af5_A 326 GEVRDISP-----DIRLTLHNAGHIL-----GSAIVHLHIGNGLHNIAITGDFKFIPTRLLEPANAKFPRLETLVMEST 394 (651)
T ss_dssp TCCEEEET-----TEEEEEEECSSST-----TCEEEEEEETTTTTCEEECCSCCCSCCSSCCCCCCBCSSCSEEEEECT
T ss_pred CCEEEecC-----CEEEEEecCCCCc-----CcEEEEEEECCCceEEEEeCCCCCCcccccccccccCCCCCEEEECCC
Confidence 999999 6 8999888766531 246899988731128999999988654 22 2248999999985
No 20
>3zq4_A Ribonuclease J 1, RNAse J1; hydrolase, RNA maturation; 3.00A {Bacillus subtilis}
Probab=99.58 E-value=5.2e-14 Score=143.24 Aligned_cols=195 Identities=16% Similarity=0.164 Sum_probs=128.3
Q ss_pred CCceEEEEecC------cEEEEEeCCeEEEEccccCCCCCCCcccccccCccccchhhhhhhccccCCCCCCCCCcCEEE
Q 018490 76 TDVFKLTYLEG------NSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQIVLIGMKTLVQLSDLPQVDCLL 149 (355)
Q Consensus 76 ~~~~~itwlGh------ss~li~~~g~~iLiDP~~sg~~~~p~~~~~~g~~~r~~~~~~~~~g~~~~~~~~~lp~iD~Vl 149 (355)
.+.++++.+|. ||++|+.++..|||||.++-... ... +....+..+. .+ .++..++|+|+
T Consensus 6 ~~~i~i~~lGg~~eiG~n~~li~~~~~~iLID~G~~~~~~---~~~--g~d~iip~~~--------~l-~~~~~~Id~I~ 71 (555)
T 3zq4_A 6 NDQTAVFALGGLGEIGKNTYAVQFQDEIVLIDAGIKFPED---ELL--GIDYVIPDYT--------YL-VKNEDKIKGLF 71 (555)
T ss_dssp CCSEEEEEEESBSSSSCCEEEEEETTEEEEEEECCBCCCT---TST--TCSEEEECCH--------HH-HTTTTTEEEEE
T ss_pred CCcEEEEEcCCCCccCCEEEEEEECCeEEEEeCCCCCCcc---ccc--cccccccCHH--------HH-hcCccCCCEEE
Confidence 46788999874 89999999999999995431111 000 0000000000 00 12335899999
Q ss_pred ecCCCCCCCChhhHHHhhhcCCCceEEEcCChHHHHhhc----C----CceEEcCCCceEEeCcccCCceEEEEEecCcc
Q 018490 150 ITQSLDDHCHLKTLKPLSKMSPNLKVIATPNAKTLLDPL----F----QNVTYVEPGQSSEIEGRNGSKLRVKATAGPVL 221 (355)
Q Consensus 150 ISH~H~DHld~~tl~~l~~~~~~~~v~~~~~~~~~l~~~----~----~~v~~l~~~e~~~l~~~~~~~l~i~~~pa~~~ 221 (355)
|||.|.|| .+.+..|.+.+ ++++|+++.+...++.. + .+++.+++++.++++ +++|+++++.|+
T Consensus 72 lTH~H~DH--iggl~~l~~~~-~~pIy~t~~t~~ll~~~l~~~~~~~~~~~~~v~~g~~~~ig-----~~~v~~~~~~H~ 143 (555)
T 3zq4_A 72 ITHGHEDH--IGGIPYLLRQV-NIPVYGGKLAIGLLRNKLEEHGLLRQTKLNIIGEDDIVKFR-----KTAVSFFRTTHS 143 (555)
T ss_dssp ESCCCHHH--HTTHHHHHTTC-CCCEEECHHHHHHHHHHHHHHSTTTTCCEEECCTTCCEEET-----TEEEEEEEEBCS
T ss_pred ECCCchhh--hCCHHHHHHhc-CceEEECHHHHHHHHHHHHHcCccCCCceEEeCCCCEEEEC-----CEEEEEEeCCCC
Confidence 99999999 58888888765 78999999877655432 1 368899999999998 899999888763
Q ss_pred CCCCCCCccEEEEEecCCceeEEEcCCCCCCcc-------c---ccc--cCCcEEEEccccccCCCceeccCHHHHHHHH
Q 018490 222 GPPWQRPENGYLVNSSQGQLTLYYEPHCVYNQN-------F---LEK--ERSDIIITPVIKQLLPKFTLVSGQEDAVKLA 289 (355)
Q Consensus 222 g~~~~~~~~g~~i~~~~~~~~i~~sGDt~~~~~-------~---~~~--~~~Dl~~l~~g~~~~~~~~~h~~~~ea~~~~ 289 (355)
.+ ...+|+|+.+ +.+++|+||+.+... + .++ .++|++++++.....+.+. .+.++..+.+
T Consensus 144 ~p----gs~~~~i~~~--~~~il~tGD~~~~~~~~~g~~d~~~l~~l~~~~~d~Li~esT~~~~~~~~--~se~~v~~~i 215 (555)
T 3zq4_A 144 IP----DSYGIVVKTP--PGNIVHTGDFKFDFTPVGEPANLTKMAEIGKEGVLCLLSDSTNSENPEFT--MSERRVGESI 215 (555)
T ss_dssp SS----SEEEEEEEET--TEEEEECCSCBCCSSCSSSCCCHHHHHHHHHTCEEEEEEECTTTTCCSCC--CCHHHHHHHH
T ss_pred Cc----CcEEEEEEEC--CcEEEEeCCCCCCCCcCcCccCHHHHHHhcccCCcEEEecCcccCCCCCC--CCHHHHHHHH
Confidence 22 2468999988 579999999987432 1 122 2799999998532223222 2334444433
Q ss_pred HH----cCCCEEEEe
Q 018490 290 KL----LHAKFIVPM 300 (355)
Q Consensus 290 ~~----l~~k~~ip~ 300 (355)
.+ .+.+.++|+
T Consensus 216 ~~~~~~~~grvii~~ 230 (555)
T 3zq4_A 216 HDIFRKVDGRIIFAT 230 (555)
T ss_dssp HHHHHHCCSCEEEEC
T ss_pred HHHHHhCCCEEEEEE
Confidence 33 355666654
No 21
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A*
Probab=99.58 E-value=1.6e-14 Score=147.25 Aligned_cols=197 Identities=11% Similarity=0.075 Sum_probs=126.6
Q ss_pred CCceEEEEec------CcEEEEEeCCeEEEEccccCCCCCCCcccccccCc---cccchhhhhhhccccCCCCCCCCCcC
Q 018490 76 TDVFKLTYLE------GNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGK---KFLKSFQIVLIGMKTLVQLSDLPQVD 146 (355)
Q Consensus 76 ~~~~~itwlG------hss~li~~~g~~iLiDP~~sg~~~~p~~~~~~g~~---~r~~~~~~~~~g~~~~~~~~~lp~iD 146 (355)
.+.|+++.|| .||++|+.++..|||||.++-... ... +.. ..+..+ ..+..+||
T Consensus 14 ~~~~~i~~LGg~~eig~n~~li~~~~~~iLID~G~~~~~~---~~~--g~~~~~p~~~~l------------~~~~~~Id 76 (562)
T 3bk2_A 14 QDHVEIIPLGGMGEIGKNITVFRFRDEIFVLDGGLAFPEE---GMP--GVDLLIPRVDYL------------IEHRHKIK 76 (562)
T ss_dssp CCCEEEEEEESBSBSSCCEEEEEETTEEEEECCCCBCCCT---TST--TCCEEEECCHHH------------HHTGGGEE
T ss_pred CCcEEEEEecCCCCcCCCEEEEEECCeEEEEECCCCCCcc---ccc--cccccccchhhh------------hcCcccCc
Confidence 4568899998 689999999999999995421100 000 000 000111 01234799
Q ss_pred EEEecCCCCCCCChhhHHHhhhcCC----CceEEEcCChHHHHhhc---------CCceEEcCCCceEEeCcccCCc-eE
Q 018490 147 CLLITQSLDDHCHLKTLKPLSKMSP----NLKVIATPNAKTLLDPL---------FQNVTYVEPGQSSEIEGRNGSK-LR 212 (355)
Q Consensus 147 ~VlISH~H~DHld~~tl~~l~~~~~----~~~v~~~~~~~~~l~~~---------~~~v~~l~~~e~~~l~~~~~~~-l~ 212 (355)
+|||||.|.|| .+.+..|.+.++ ++++|+++.+.+.++.. ..+++++++++.++++ + ++
T Consensus 77 ~I~iTH~H~DH--iggl~~L~~~~~~~~~~~pIy~~~~t~~~l~~~l~~~~~~~~~~~~~~v~~g~~~~lg-----~~~~ 149 (562)
T 3bk2_A 77 AWVLTHGHEDH--IGGLPFLLPMIFGKESPVPIYGARLTLGLLRGKLEEFGLRPGAFNLKEISPDDRIQVG-----RYFT 149 (562)
T ss_dssp EEECCCCCHHH--HTTHHHHHHHHHCSCCCSEEEEEHHHHHHHHHHHHHTTCCSTTSEEEEECTTCEEEET-----TTEE
T ss_pred EEEECCCChHH--hCCHHHHHHhhccccCCceEEeCHHHHHHHHHHHHHcCCCcCCceEEEECCCCEEEeC-----CCEE
Confidence 99999999999 578887766432 68999999887655432 1357889999999997 6 99
Q ss_pred EEEEecCccCCCCCCCccEEEEEecCCceeEEEcCCCCCCc--------c---cccc--cCCcEEEEccccccCCCce-e
Q 018490 213 VKATAGPVLGPPWQRPENGYLVNSSQGQLTLYYEPHCVYNQ--------N---FLEK--ERSDIIITPVIKQLLPKFT-L 278 (355)
Q Consensus 213 i~~~pa~~~g~~~~~~~~g~~i~~~~~~~~i~~sGDt~~~~--------~---~~~~--~~~Dl~~l~~g~~~~~~~~-~ 278 (355)
|+++++.|+.+ ...+|+|+.+ +.+++|+||+.+.. . +.+. .++|+++++......+... .
T Consensus 150 v~~~~~~H~~~----gs~~~~i~~~--~~~il~tGD~~~~~~~~~g~~~d~~~l~~~~~~~~d~Li~EsT~~~~~g~~~~ 223 (562)
T 3bk2_A 150 LDLFRMTHSIP----DNSGVVIRTP--IGTIVHTGDFKLDPTPIDGKVSHLAKVAQAGAEGVLLLIADATNAERPGYTPS 223 (562)
T ss_dssp EEEEECCCSSS----SCEEEEEEET--TEEEEECCSCCCCSSCTTSCCCCCHHHHHHHHHCCSEEEEECTTTTCCSCCCC
T ss_pred EEEEECCCCCc----ccEEEEEEEC--CeEEEEcCCCCCCCCCCCCCcccHHHHHHhhccCCCEEEecccCCCCCCCCCh
Confidence 99998876322 2468999987 56999999996532 1 2222 3799999997532222211 1
Q ss_pred ccCHH-HHHHHHHHcCCCEEEEeccC
Q 018490 279 VSGQE-DAVKLAKLLHAKFIVPMKNG 303 (355)
Q Consensus 279 h~~~~-ea~~~~~~l~~k~~ip~H~~ 303 (355)
+.... +..++++..+ ++++..|++
T Consensus 224 e~~v~~~l~~~~~~~~-grvii~~fa 248 (562)
T 3bk2_A 224 EMEIAKELDRVIGRAP-GRVFVTTFA 248 (562)
T ss_dssp HHHHHHHHHHHHHHCS-SCEEEECCT
T ss_pred HHHHHHHHHHHHHhCC-CEEEEEEcc
Confidence 11222 3334455445 555566665
No 22
>2i7x_A Protein CFT2; polyadenylation, metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination, double-strand break repair; 2.50A {Saccharomyces cerevisiae} SCOP: d.157.1.10
Probab=99.48 E-value=2e-13 Score=142.50 Aligned_cols=184 Identities=16% Similarity=0.169 Sum_probs=116.7
Q ss_pred cCcEEEEEeCCeEEEEccccCCCCCCCcccccccCccccchhhhhhhccccCCCCCCCCCcCEEEecCCCCCCCChhhHH
Q 018490 85 EGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQIVLIGMKTLVQLSDLPQVDCLLITQSLDDHCHLKTLK 164 (355)
Q Consensus 85 Ghss~li~~~g~~iLiDP~~sg~~~~p~~~~~~g~~~r~~~~~~~~~g~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~ 164 (355)
|.||+||+.++.+|||||.+.. .. ..+. ..+..+. +..++||+|||||.|.|| .+.+.
T Consensus 14 ~~n~~LIe~~~~~ILID~G~~~-~~--~~~~-----~~l~~L~------------~~~~~IdaVlLTH~H~DH--iGgLp 71 (717)
T 2i7x_A 14 TTVGSVVRFDNVTLLIDPGWNP-SK--VSYE-----QCIKYWE------------KVIPEIDVIILSQPTIEC--LGAHS 71 (717)
T ss_dssp SCCCEEEEETTEEEEECCCCCT-TT--SCHH-----HHHHHHH------------TTGGGCCEEECCCSSHHH--HTTHH
T ss_pred CCCEEEEEECCeEEEEeCCCCc-cc--chhh-----hHHHHHH------------hcCCCCCEEEECCCChHH--HCCHH
Confidence 4689999999999999995531 10 0000 0000110 112479999999999999 57777
Q ss_pred HhhhcC-----CCceEEEcCChHHHHhh--------c-------------------CCceEEcCCCceEEe----CcccC
Q 018490 165 PLSKMS-----PNLKVIATPNAKTLLDP--------L-------------------FQNVTYVEPGQSSEI----EGRNG 208 (355)
Q Consensus 165 ~l~~~~-----~~~~v~~~~~~~~~l~~--------~-------------------~~~v~~l~~~e~~~l----~~~~~ 208 (355)
.|.+++ .+++||+++.+...++. + ..+++.+++++.+.+ +
T Consensus 72 ~L~~~~~~g~~~~~pIY~t~~t~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~l~~ge~i~l~~~~g---- 147 (717)
T 2i7x_A 72 LLYYNFTSHFISRIQVYATLPVINLGRVSTIDSYASAGVIGPYDTNKLDLEDIEISFDHIVPLKYSQLVDLRSRYD---- 147 (717)
T ss_dssp HHHHHSHHHHHHTCEEEEEHHHHHHHHHHHHHHHHHTTSSSSBTTCCSCHHHHHHHHHTSEEECTTCCEEETTTTT----
T ss_pred HHHHhhhhcccCCceEEecchhHHHHHHHHHHHHHhhccccccccccccHHHHHhhhhceEEecCCCEEEEeecCC----
Confidence 776532 26899999865442211 1 115788999999999 5
Q ss_pred CceEEEEEecCccCCCCCCCccEEEEEecCCceeEEEcCCCCCCcc-------c--------ccccCCcEEEEccccccC
Q 018490 209 SKLRVKATAGPVLGPPWQRPENGYLVNSSQGQLTLYYEPHCVYNQN-------F--------LEKERSDIIITPVIKQLL 273 (355)
Q Consensus 209 ~~l~i~~~pa~~~g~~~~~~~~g~~i~~~~~~~~i~~sGDt~~~~~-------~--------~~~~~~Dl~~l~~g~~~~ 273 (355)
+++|+++++.|+. ..++|.|+.+ +.+|+|+||+++... + ....++|++++++.. ..
T Consensus 148 -gi~V~~~~aGHs~-----Gs~~~~I~~~--~~~IvytGD~~~~~~~~l~~~~~L~~~g~~l~~l~~~D~LI~EsTy-~~ 218 (717)
T 2i7x_A 148 -GLTLLAYNAGVCP-----GGSIWCISTY--SEKLVYAKRWNHTRDNILNAASILDATGKPLSTLMRPSAIITTLDR-FG 218 (717)
T ss_dssp -TEEEEEEECSSST-----TCEEEEEECS--SCEEEECSSCCSSCCSSCCCCTTBCTTSCBCSTTSSCSEEEECCSC-CC
T ss_pred -CEEEEEECCCCCC-----CcEEEEEEeC--CCEEEEECCCCCCcccccCccccccccchhHHhccCCcEEEEcCCC-CC
Confidence 8999988766641 1468999887 569999999886432 1 223489999999852 11
Q ss_pred CCceeccCHHHHHHHHHH---cCCCEEEEeccC
Q 018490 274 PKFTLVSGQEDAVKLAKL---LHAKFIVPMKNG 303 (355)
Q Consensus 274 ~~~~~h~~~~ea~~~~~~---l~~k~~ip~H~~ 303 (355)
.....+...++..+.+.. .+.+++||++..
T Consensus 219 ~~h~~~~~~~~l~~~i~~~l~~~G~VlIp~fa~ 251 (717)
T 2i7x_A 219 SSQPFKKRSKIFKDTLKKGLSSDGSVIIPVDMS 251 (717)
T ss_dssp CSSCHHHHHHHHHHHHHHHTSTTCEEEEEECTT
T ss_pred CCCCCHHHHHHHHHHHHHHHhCCCeEEEEeccc
Confidence 111111112223333333 367899999865
No 23
>3m8t_A 'BLR6230 protein; subclass B3 beta-lactamase, zinc enzyme, sulfonamide complex hydrolase-hydrolase inhibitor complex; HET: 4NZ; 1.33A {Bradyrhizobium japonicum} PDB: 3lvz_A* 2gmn_A
Probab=99.48 E-value=1.4e-13 Score=128.18 Aligned_cols=178 Identities=13% Similarity=0.085 Sum_probs=114.7
Q ss_pred EecCcEEEEEeCCeEEEEccccCCCCCCCcccccccCccccchhhhhhhccccCCCCCCCCCcCEEEecCCCCCCCChhh
Q 018490 83 YLEGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQIVLIGMKTLVQLSDLPQVDCLLITQSLDDHCHLKT 162 (355)
Q Consensus 83 wlGhss~li~~~g~~iLiDP~~sg~~~~p~~~~~~g~~~r~~~~~~~~~g~~~~~~~~~lp~iD~VlISH~H~DHld~~t 162 (355)
..|++|++|+.++..|||||.... . ...+ .+.++. ..+++ .+||+|++||.|.|| .++
T Consensus 52 ~~~~n~~li~~~~~~iLID~G~~~--~--~~~~----~~~l~~---------~g~~~---~~i~~ii~TH~H~DH--~gg 109 (294)
T 3m8t_A 52 TDGIAVYVIKTSQGLILMDTAMPQ--S--TGMI----KDNIAK---------LGFKV---ADIKLILNTHAHLDH--TGG 109 (294)
T ss_dssp CSSSCCEEEEETTEEEEECCCCGG--G--HHHH----HHHHHH---------TTCCG---GGEEEEECSCCCHHH--HTT
T ss_pred CCCeEEEEEEECCceEEEECCCch--h--HHHH----HHHHHH---------cCCCH---HHCcEEEECCCCccc--ccc
Confidence 346899999999999999994321 0 0111 001111 01111 268999999999999 578
Q ss_pred HHHhhhcCCCceEEEcCChHHHHhhc---C------------CceEEcCCCceEEeCcccCCceEEEEEecC-ccCCCCC
Q 018490 163 LKPLSKMSPNLKVIATPNAKTLLDPL---F------------QNVTYVEPGQSSEIEGRNGSKLRVKATAGP-VLGPPWQ 226 (355)
Q Consensus 163 l~~l~~~~~~~~v~~~~~~~~~l~~~---~------------~~v~~l~~~e~~~l~~~~~~~l~i~~~pa~-~~g~~~~ 226 (355)
+..|.++ +++++|+++.....++.. + .....+..++.+.++ +++|++++.. |+.
T Consensus 110 ~~~l~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g-----~~~i~~~~~pgHt~---- 179 (294)
T 3m8t_A 110 FAEIKKE-TGAQLVAGERDKPLLEGGYYPGDEKNEDLAFPAVKVDRAVKEGDRVTLG-----DTTLTAHATPGHSP---- 179 (294)
T ss_dssp HHHHHHH-HCCEEEEEGGGHHHHHHTCBTTBTTCGGGCCCCCCCSEEECTTCEEEET-----TEEEEEEECCSSST----
T ss_pred HHHHhhc-cCCEEEEChHHHHHHhcccccCccccccCCCCCCCCceEeCCCCEEEeC-----CEEEEEEeCCCCCc----
Confidence 8888765 379999999888766543 1 124678889999997 6666665433 321
Q ss_pred CCccEEEEEecCCc--eeEEEcCCCCCCcccccccCCcEEEEccccccCCCceeccCHHHHHHHHHHcCCCEEEEeccCC
Q 018490 227 RPENGYLVNSSQGQ--LTLYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLAKLLHAKFIVPMKNGD 304 (355)
Q Consensus 227 ~~~~g~~i~~~~~~--~~i~~sGDt~~~~~~~~~~~~Dl~~l~~g~~~~~~~~~h~~~~ea~~~~~~l~~k~~ip~H~~~ 304 (355)
...+|.++.++++ .+++|+||+.+...... +....+. ......++++.++.++++.++|.|.+.
T Consensus 180 -g~~~~~~~~~~~~~~~~~lf~GD~~~~~~~~~-----------~~~~~~~--~~~~~~~sl~~l~~l~~~~v~pgHg~~ 245 (294)
T 3m8t_A 180 -GCTSWEMTVKDGKEDREVLFFCSGTVALNRLV-----------GQPTYAG--IVDDYRATFAKAKAMKIDVLLGPHPEV 245 (294)
T ss_dssp -TCEEEEEEEEETTEEEEEEECCCCCCTTCCCS-----------SSCSSTT--HHHHHHHHHHHHHHSCCSEEECSSGGG
T ss_pred -cCEEEEEEccCCCccceEEEEcCccCCCCcCc-----------CCCCCCc--hHHHHHHHHHHHHCCCCCEEEcCCCCh
Confidence 2468888764211 27999999985432110 1101111 112346777888889999999999988
Q ss_pred cc
Q 018490 305 LD 306 (355)
Q Consensus 305 f~ 306 (355)
+.
T Consensus 246 ~~ 247 (294)
T 3m8t_A 246 YG 247 (294)
T ss_dssp TT
T ss_pred hc
Confidence 76
No 24
>4ax1_B Metallo-beta-lactamase AIM-1; hydrolase, antibiotic resistance, acquired B3, drug binding; 1.40A {Pseudomonas aeruginosa} PDB: 4awy_B 4awz_A 4ax0_B
Probab=99.44 E-value=2.7e-13 Score=126.53 Aligned_cols=180 Identities=15% Similarity=0.115 Sum_probs=111.7
Q ss_pred ecCcEEEEEeCCeEEEEccccCCCCCCCcccccccCccccchhhhhhhccccCCCCCCCCCcCEEEecCCCCCCCChhhH
Q 018490 84 LEGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQIVLIGMKTLVQLSDLPQVDCLLITQSLDDHCHLKTL 163 (355)
Q Consensus 84 lGhss~li~~~g~~iLiDP~~sg~~~~p~~~~~~g~~~r~~~~~~~~~g~~~~~~~~~lp~iD~VlISH~H~DHld~~tl 163 (355)
.|++|++|+.++..|||||.+.... ..+ .+.++. ..+++ .+||+|++||.|+|| .+++
T Consensus 56 ~~~~~~li~~~~~~iLiD~G~~~~~----~~~----~~~l~~---------~g~~~---~~i~~ii~TH~H~DH--~gg~ 113 (303)
T 4ax1_B 56 CGISALLVTSDAGHILVDAATPQAG----PQI----LANIRA---------LGFRP---EDVRAIVFSHEHFDH--AGSL 113 (303)
T ss_dssp SSSCCEEECCTTCEEEECCBSTTCH----HHH----HHHHHH---------TTCCG---GGEEEEECSCSSHHH--HTTH
T ss_pred CCceEEEEEeCCcEEEEECCCcccH----HHH----HHHHHH---------cCCCH---HHCcEEEcCCCCccc--cCCH
Confidence 3589999999999999999542111 111 001111 11111 258999999999999 5788
Q ss_pred HHhhhcCCCceEEEcCChHHHHhhcC-----------------CceEEcCCCceEEeCcccCCceEEEEEecC-ccCCCC
Q 018490 164 KPLSKMSPNLKVIATPNAKTLLDPLF-----------------QNVTYVEPGQSSEIEGRNGSKLRVKATAGP-VLGPPW 225 (355)
Q Consensus 164 ~~l~~~~~~~~v~~~~~~~~~l~~~~-----------------~~v~~l~~~e~~~l~~~~~~~l~i~~~pa~-~~g~~~ 225 (355)
..+.+++ ++++|+++.....++... ...+.++.|+++.++ +++|+++++. |+.
T Consensus 114 ~~l~~~~-~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g-----~~~v~~~~~pgHt~--- 184 (303)
T 4ax1_B 114 AELQKAT-GAPVYARAPAIDTLKRGLPDRTDPNFEVAEPVAPVANIVTLADDGVVSVG-----PLALTAVASPGHTP--- 184 (303)
T ss_dssp HHHHHHH-CCCEEEEHHHHHHHHHTSCCTTSTTGGGCCCCCCCSCEEEECTTCEEEET-----TEEEEEEECCSSST---
T ss_pred HHHHhhc-CCEEEEcHHHHHHHhccccCccccccccccCcCCCCCcEEeCCCCEEEEC-----CeEEEEEeCCCCCc---
Confidence 8887764 799999988777665431 246788999999998 6666655432 321
Q ss_pred CCCccEEEEEecCCc--eeEEEcCCCCCCcccccccCCcEEEEccccccCCCceeccCHHHHHHHHHHcCCCEEEEeccC
Q 018490 226 QRPENGYLVNSSQGQ--LTLYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLAKLLHAKFIVPMKNG 303 (355)
Q Consensus 226 ~~~~~g~~i~~~~~~--~~i~~sGDt~~~~~~~~~~~~Dl~~l~~g~~~~~~~~~h~~~~ea~~~~~~l~~k~~ip~H~~ 303 (355)
...+|.++..... ..+++ ||+.+..... ..+ ++.++ ..+. .-+...++++.++.++++.++|.|.+
T Consensus 185 --g~~~~~~~~~~~~~~~~~l~-gD~l~~~~~~---~~~---~~~~~-~~~~--~~~~~~~sl~~l~~l~~~~vv~~Hg~ 252 (303)
T 4ax1_B 185 --GGTSWTWRSCEGDDCRQMVY-ADSLTAISDD---VFR---YSDDA-AHPG--YLAAFRNTLARVAALDCDILVTPHPS 252 (303)
T ss_dssp --TCEEEEEEEEETTEEEEEEE-CCCCCCCCCS---SCC---TTCGG-GSTT--HHHHHHHHHHHHHTSCCSEEECSSGG
T ss_pred --cceEEEEEecCCCceeEEEE-eCCccccCcC---ccc---CCCCC-CCcc--HHHHHHHHHHHHhcCCCCEEEcCCcc
Confidence 1356777653111 13555 8987632110 110 11111 0100 11245677888889999999999998
Q ss_pred Ccc
Q 018490 304 DLD 306 (355)
Q Consensus 304 ~f~ 306 (355)
.+.
T Consensus 253 ~~~ 255 (303)
T 4ax1_B 253 ASG 255 (303)
T ss_dssp GGT
T ss_pred hhh
Confidence 865
No 25
>4b87_A DNA cross-LINK repair 1A protein; dclre1A, DCLRE, interstrand crosslink repair, hydrolase, NIT mustard, cancer, chemotherapy, PSO2 homolog,; HET: DNA; 2.16A {Homo sapiens}
Probab=99.44 E-value=2.6e-13 Score=131.24 Aligned_cols=163 Identities=10% Similarity=0.092 Sum_probs=112.3
Q ss_pred CCcCEEEecCCCCCCCChhhHHHhhhcCCCceEEEcCChHHHHhhc-C---CceEEcCCCceEEeCcccCCceEEEEEec
Q 018490 143 PQVDCLLITQSLDDHCHLKTLKPLSKMSPNLKVIATPNAKTLLDPL-F---QNVTYVEPGQSSEIEGRNGSKLRVKATAG 218 (355)
Q Consensus 143 p~iD~VlISH~H~DHld~~tl~~l~~~~~~~~v~~~~~~~~~l~~~-~---~~v~~l~~~e~~~l~~~~~~~l~i~~~pa 218 (355)
++||+|||||.|.||+ +++.. .. ++++|+++.+...++.. + .++..+++++.++++ +++|+++++
T Consensus 50 ~~IdaI~lTH~H~DHi--ggl~~---~~-~~pIy~s~~t~~ll~~~l~~~~~~~~~l~~g~~~~ig-----~~~v~~~~a 118 (367)
T 4b87_A 50 EGCTAYFLTHFHSDHY--AGLSK---HF-TFPVYCSEITGNLLKNKLHVQEQYIHPLPLDTECIVN-----GVKVVLLDA 118 (367)
T ss_dssp TTCCEEECCCCCHHHH--TTCST---TC-CSCEEECHHHHHHHHHHSCCCGGGEEECCBTSCEEET-----TEEEEEEEC
T ss_pred cCCcEEEECcChHHHh--CCccc---cc-CCcEEECHHHHHHHHHHhccccceEEEeCCCCEEEEC-----CEEEEEEeC
Confidence 4799999999999995 56542 22 78999999888866654 2 368899999999998 899999987
Q ss_pred CccCCCCCCCccEEEEEecCCceeEEEcCCCCCCcccc--cc--cCCcEEEEccccccCCCceeccCHHHHHH-----HH
Q 018490 219 PVLGPPWQRPENGYLVNSSQGQLTLYYEPHCVYNQNFL--EK--ERSDIIITPVIKQLLPKFTLVSGQEDAVK-----LA 289 (355)
Q Consensus 219 ~~~g~~~~~~~~g~~i~~~~~~~~i~~sGDt~~~~~~~--~~--~~~Dl~~l~~g~~~~~~~~~h~~~~ea~~-----~~ 289 (355)
.|.. ...+|+|+.++ +.+++|+||+++.+... .. .++|++++++.- ..+.+ .|.+.+++.+ +.
T Consensus 119 gH~~-----gs~~~~i~~~~-g~~il~tGD~~~~~~~~~~~l~~~~~D~Li~EsTy-~~~~~-~~ps~~~~~~~~~~~i~ 190 (367)
T 4b87_A 119 NHCP-----GAVMILFYLPN-GTVILHTGDFRADPSMERSLLADQKVHMLYLDTTY-CSPEY-TFPSQQEVIRFAINTAF 190 (367)
T ss_dssp SSST-----TCEEEEEECTT-SCEEEECCSCCCCGGGGGSGGGTSCCCEEEECCTT-CSTTC-CCCCHHHHHHHHHHHHH
T ss_pred CCcC-----CcEEEEEEcCC-CcEEEEecCcccCcccchhhhccCCCCEEEEeccc-CCCCC-CCCCHHHHHHHHHHHHH
Confidence 7631 24689998753 56899999999987553 22 289999999853 23333 3566666655 33
Q ss_pred HHc--CCCEEEEeccCCccccccccccccccCCHHHHHHHHHhcCCCCeEec
Q 018490 290 KLL--HAKFIVPMKNGDLDSKGFLASIIQSEGTVESFKELLSKELPDAQLLE 339 (355)
Q Consensus 290 ~~l--~~k~~ip~H~~~f~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (355)
+.+ +++.++ +.++|. + .-.+++.+.+++. +.++.+
T Consensus 191 ~~~~~~g~~~v--~~~a~~----i-------gr~q~ll~ia~~~--g~ki~v 227 (367)
T 4b87_A 191 EAVTLNPHALV--VCGTYS----I-------GKEKVFLAIADVL--GSKVGM 227 (367)
T ss_dssp HHHHHCTTEEE--EEEESS----S-------CCHHHHHHHHHHT--TCCEEC
T ss_pred HHHHhCCCeEE--EEccch----h-------HHHHHHHHHHHHh--CCEEEE
Confidence 333 566543 445554 2 2356677777664 344444
No 26
>3hnn_A Putative diflavin flavoprotein A 5; PSI-2, protein structure initiative, northeast structural GE consortium, NESG, NSR435A, DFA5, electron transport; 1.80A {Nostoc SP} PDB: 4fek_A
Probab=99.42 E-value=3.5e-13 Score=124.12 Aligned_cols=179 Identities=16% Similarity=0.252 Sum_probs=109.6
Q ss_pred cEEEEEeCCeEEEEccccCCCCCCCcccccccCccccchhhhhhhccccCCCCCCCCCcCEEEecCCCCCCCChhhHHHh
Q 018490 87 NSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQIVLIGMKTLVQLSDLPQVDCLLITQSLDDHCHLKTLKPL 166 (355)
Q Consensus 87 ss~li~~~g~~iLiDP~~sg~~~~p~~~~~~g~~~r~~~~~~~~~g~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~l 166 (355)
|||+|+. +..+||||..+ .. ...+ +..+. ..+ +..+||+|++||.|.|| .+++..|
T Consensus 44 N~yli~~-~~~iLID~G~~---~~-~~~~-------~~~l~-------~~~---~~~~i~~IilTH~H~DH--~gg~~~l 99 (262)
T 3hnn_A 44 NSYVIEG-DKTAIIDPPVE---SF-MKIY-------LEALQ-------QTV---NLKKLDYVILGHFSPNR--IPTFKAL 99 (262)
T ss_dssp EEEEEES-SSEEEECCCCH---HH-HHHH-------HHHHH-------HHS---CGGGEEEEECSSCCGGG--HHHHHHH
T ss_pred EEEEEEC-CCEEEEECCCc---ch-HHHH-------HHHHH-------HhC---ChhhCCEEEECCCCcch--hchHHHH
Confidence 6899996 78999999332 10 0001 11111 011 22379999999999999 6899999
Q ss_pred hhcCCCceEEEcCChHHHHhhcC----CceEEcCCCceEEeCcccCCceEEEEEecCccCCCCCCCccEEEEEecCCcee
Q 018490 167 SKMSPNLKVIATPNAKTLLDPLF----QNVTYVEPGQSSEIEGRNGSKLRVKATAGPVLGPPWQRPENGYLVNSSQGQLT 242 (355)
Q Consensus 167 ~~~~~~~~v~~~~~~~~~l~~~~----~~v~~l~~~e~~~l~~~~~~~l~i~~~pa~~~g~~~~~~~~g~~i~~~~~~~~ 242 (355)
.+++|++++|+++.....++... .++..++.|+++++++ +..+++..+|+.|+ ..++++..+ +.+
T Consensus 100 ~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~g~~l~lg~--~~~~~~i~tpg~Ht-------~g~~~~~~~--~~~ 168 (262)
T 3hnn_A 100 LELAPQITFVCSLPAAGDLRAAFPDDNLNILPMRGKETLDLGK--GHVLKFLPIPSPRW-------PAGLCTYDV--QTQ 168 (262)
T ss_dssp HHHCTTCEEEECHHHHHHHHHHSSSSCCEEEECCSSCEEECST--TCEEEEEECCCSSC-------TTCEEEEET--TTT
T ss_pred HHHCCCCEEEECHHHHHHHHHHhCCCCCceEEeCCCCEEEcCC--CcEEEEEECCCCCC-------CCeeEEEeC--CCC
Confidence 88878999999998887776542 4678899999999850 01266666666332 223434344 358
Q ss_pred EEEcCCCCCCcccccccCCcEEEEccccccCC---Cc------eeccCHHHHHHHHHHcCCCEEEEeccCCc
Q 018490 243 LYYEPHCVYNQNFLEKERSDIIITPVIKQLLP---KF------TLVSGQEDAVKLAKLLHAKFIVPMKNGDL 305 (355)
Q Consensus 243 i~~sGDt~~~~~~~~~~~~Dl~~l~~g~~~~~---~~------~~h~~~~ea~~~~~~l~~k~~ip~H~~~f 305 (355)
++|+||+ +...... ..+.--+.+. +.+ .+ ...+...++++.++.|+++.++|.|...+
T Consensus 169 ~lfsGD~-~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~sl~~l~~L~~~~i~PgHG~~~ 235 (262)
T 3hnn_A 169 ILYTDKI-FGAHICG---DDVFDDNWES-FKEDQRYYFNCLMAPHAIHVEAALEKISDLQVRLYAVGHGPLV 235 (262)
T ss_dssp EEEEETT-TCCCCCC---SCCEESCGGG-THHHHHHHHHHHTGGGHHHHHHHHHHHTTSCCSEEEESSSSEE
T ss_pred EEEEeec-CccccCc---hhcccccHHH-HHHHHHHHHHHHhhhhHHHHHHHHHHHhCCCCCEEECCCCccc
Confidence 9999999 3222111 0011001111 100 00 00124567778888889999999997653
No 27
>3l6n_A Metallo-beta-lactamase; zinc, hydolase, antibiotics resistance, hydrolase; 1.65A {Chryseobacterium indologenes} SCOP: d.157.1.0
Probab=99.36 E-value=5.3e-12 Score=112.39 Aligned_cols=171 Identities=15% Similarity=0.088 Sum_probs=108.2
Q ss_pred EecCcEEEEEeCCeEEEEccccCCCCCCCcccccccCccccchhhhhhhccccCCCCCCCCCcCEEEecCCCCCCCChhh
Q 018490 83 YLEGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQIVLIGMKTLVQLSDLPQVDCLLITQSLDDHCHLKT 162 (355)
Q Consensus 83 wlGhss~li~~~g~~iLiDP~~sg~~~~p~~~~~~g~~~r~~~~~~~~~g~~~~~~~~~lp~iD~VlISH~H~DHld~~t 162 (355)
.++.+|++|+.++..|||||..+... . .+.+..+.. ... .++|+|++||.|.||+ +.
T Consensus 28 ~~~~n~~li~~~~~~iLiD~G~~~~~------~----~~~~~~l~~----------~~~-~~i~~ii~TH~H~DH~--gg 84 (219)
T 3l6n_A 28 EYSANSMYLVTKKGVVLFDVPWEKVQ------Y----QSLMDTIKK----------RHN-LPVVAVFATHSHDDRA--GD 84 (219)
T ss_dssp EEEEEEEEEEETTEEEEESCCSSGGG------H----HHHHHHHHH----------HHS-CCEEEEECSSSSTTTT--CC
T ss_pred cccceEEEEEeCCEEEEEeCCCChHH------H----HHHHHHHHH----------hcC-CceeEEEecCCCcccc--cC
Confidence 34578999999999999999432100 0 000111110 000 2799999999999995 67
Q ss_pred HHHhhhcCCCceEEEcCChHHHHhhcC--CceEEcCCCceEEeCcccCCceEEEEEe-cC-ccCCCCCCCccEEEEEecC
Q 018490 163 LKPLSKMSPNLKVIATPNAKTLLDPLF--QNVTYVEPGQSSEIEGRNGSKLRVKATA-GP-VLGPPWQRPENGYLVNSSQ 238 (355)
Q Consensus 163 l~~l~~~~~~~~v~~~~~~~~~l~~~~--~~v~~l~~~e~~~l~~~~~~~l~i~~~p-a~-~~g~~~~~~~~g~~i~~~~ 238 (355)
+..|.+ . ++++|+++.....+++.+ .....++.++++.++ +++|++++ +. |+. ...++.++
T Consensus 85 ~~~l~~-~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g-----~~~i~~~~~~pgHt~-----g~~~~~~~--- 149 (219)
T 3l6n_A 85 LSFFNN-K-GIKTYATAKTNEFLKKDGKATSTEIIKTGKPYRIG-----GEEFVVDFLGEGHTA-----DNVVVWFP--- 149 (219)
T ss_dssp THHHHH-T-TCEEEECHHHHHHHHHTTCCCCSEECCTTSEEEET-----TEEEEEECCCCSSSS-----SCCEEEET---
T ss_pred HHHHHh-C-CCEEEEcHHHHHHHHhcCCCCCcEecCCCCEEEEC-----CEEEEEEeCCCCCCC-----CCEEEEEC---
Confidence 777765 2 799999998888777653 457788899999997 77787764 22 321 12455553
Q ss_pred CceeEEEcCCCCCCcccccccCCcEEEEccccccCCCceeccCHHHHHHHHHHc--CCCEEEEeccCCc
Q 018490 239 GQLTLYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLAKLL--HAKFIVPMKNGDL 305 (355)
Q Consensus 239 ~~~~i~~sGDt~~~~~~~~~~~~Dl~~l~~g~~~~~~~~~h~~~~ea~~~~~~l--~~k~~ip~H~~~f 305 (355)
+.+++|+||+.+.. +..++..++.+. .....++++.+..+ +.+.++|.|....
T Consensus 150 -~~~~lf~GD~~~~~-----~~~~~~~~~~~~--------~~~~~~sl~~l~~~~~~~~~v~pgHg~~~ 204 (219)
T 3l6n_A 150 -KYNVLDGGCLVKSN-----SATDLGYIKEAN--------VEQWPKTINKLKAKYSKATLIIPGHDEWK 204 (219)
T ss_dssp -TTTEEEEETTSCCT-----TCSSCCCCTTCC--------TTTHHHHHHHHHHHCTTCSEEEESBSCCT
T ss_pred -CCCEEEECCeeecc-----ccccccccCccC--------HHHHHHHHHHHHHhCCCCCEEECCCCCCC
Confidence 24799999988632 122221122111 11345666666654 5799999998653
No 28
>2bib_A CBPE, teichoic acid phosphorylcholine esterase/ choline protein; choline-binding protein, PCE, phosphorylcholine estera hydrolase; HET: PC BTB; 1.92A {Streptococcus pneumoniae} SCOP: b.109.1.1 d.157.1.8 PDB: 1wra_A*
Probab=99.34 E-value=9.4e-12 Score=126.36 Aligned_cols=225 Identities=12% Similarity=0.125 Sum_probs=129.1
Q ss_pred CCceEEEEecC-----cEEEEEeCCeEEEEccccCCCCC----CCcccccc---c----CccccchhhhhhhccccCCCC
Q 018490 76 TDVFKLTYLEG-----NSWLWDLDGVKVLVDPILVGNLD----FGIPWLFD---A----GKKFLKSFQIVLIGMKTLVQL 139 (355)
Q Consensus 76 ~~~~~itwlGh-----ss~li~~~g~~iLiDP~~sg~~~----~p~~~~~~---g----~~~r~~~~~~~~~g~~~~~~~ 139 (355)
...++|++|.. +|+||+.++..|||||....... ...+|... + ..+++.+ .+..
T Consensus 3 ~~~~~I~~ldvG~gqg~~~lI~~~~~~iLID~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----------~L~~ 72 (547)
T 2bib_A 3 SSGNKIHFINVQEGGSDAIILESNGHFAMVDTGEDYDFPDGSDSRYPWREGIETSYKHVLTDRVFR----------RLKE 72 (547)
T ss_dssp CSCEEEEEECBSSSBCCEEEEEETTEEEEEECCCCSCCCCSSSTTSCCCTTCCCCGGGCCHHHHHH----------HHHH
T ss_pred CcCceEEEEEcCCCCceEEEEEeCCeEEEEeCCCCCcccccccccccccccccccccchhHHHHHH----------HHHh
Confidence 45678888743 69999999999999995421000 00111000 0 0000111 1111
Q ss_pred CCCCCcCEEEecCCCCCCCChhhHHHhhhcCCCceEEEcCChHHHH--------------------hhcCCceE--EcCC
Q 018490 140 SDLPQVDCLLITQSLDDHCHLKTLKPLSKMSPNLKVIATPNAKTLL--------------------DPLFQNVT--YVEP 197 (355)
Q Consensus 140 ~~lp~iD~VlISH~H~DHld~~tl~~l~~~~~~~~v~~~~~~~~~l--------------------~~~~~~v~--~l~~ 197 (355)
..+.+||+|||||.|.|| .+.+..|.+.++..++++++.....+ +..+..+. .+..
T Consensus 73 ~gi~~id~vilTH~H~DH--iggl~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 150 (547)
T 2bib_A 73 LSVQKLDFILVTHTHSDH--IGNVDELLSTYPVDRVYLKKYSDSRITNSERLWDNLYGYDKVLQTATETGVSVIQNITQG 150 (547)
T ss_dssp TTCCCBSCEECCCSCHHH--HTTHHHHHHHSCBSEEECCCCCGGGBSCGGGCTTHHHHHHHHHHHHHHTTCEEECSCCTT
T ss_pred cCcccccEEEEcCCCccc--cCCHHHHHHhCCccEEEECcccccccCChHHHHhHHHHHHHHHHHHHHhCCeEEEeecCC
Confidence 234579999999999999 57888887766444677776533221 11122332 2456
Q ss_pred CceEEeCcccCCceEEEEEec---CccCC----CCCCC--ccEEEEEecCCceeEEEcCCCCCCccc----cc-ccCCcE
Q 018490 198 GQSSEIEGRNGSKLRVKATAG---PVLGP----PWQRP--ENGYLVNSSQGQLTLYYEPHCVYNQNF----LE-KERSDI 263 (355)
Q Consensus 198 ~e~~~l~~~~~~~l~i~~~pa---~~~g~----~~~~~--~~g~~i~~~~~~~~i~~sGDt~~~~~~----~~-~~~~Dl 263 (355)
++.++++ +++|++++. .|... ..+.+ .++++|+.+ +.+++|+||+...... .. ..++||
T Consensus 151 g~~~~~g-----~~~i~~l~~~~~~h~~~~~~~~~~~n~~S~vl~i~~~--~~~iLftGD~~~~~~~e~~l~~~~~~~Dv 223 (547)
T 2bib_A 151 DAHFQFG-----DMDIQLYNYENETDSSGELKKIWDDNSNSLISVVKVN--GKKIYLGGDLDNVHGAEDKYGPLIGKVDL 223 (547)
T ss_dssp TTEEEET-----TEEEEEESCSCCBCTTSCBCCBSSGGGGCCEEEEEET--TEEEEECTTCCSTTSHHHHHHHHHCCCSE
T ss_pred CceEecC-----CeeEEEecCccccCccccccccCCCCCCcEEEEEEEC--CEEEEecCCccchhhhhhhhcccccceeE
Confidence 7788887 899988862 22110 01112 458888887 6899999999875321 11 248999
Q ss_pred EEEccccccCCCceeccCHHHHHHHHHHcCCCEEEEeccCCccccccccccccccCCHHHHHHHHHhcCCCCeEec
Q 018490 264 IITPVIKQLLPKFTLVSGQEDAVKLAKLLHAKFIVPMKNGDLDSKGFLASIIQSEGTVESFKELLSKELPDAQLLE 339 (355)
Q Consensus 264 ~~l~~g~~~~~~~~~h~~~~ea~~~~~~l~~k~~ip~H~~~f~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (355)
++++--+.. . ...+.++++.++|+.+|... +..+ ...-|.++..+.+++. +++++.
T Consensus 224 Lkv~HHG~S--~------~s~s~~fl~~v~P~~aiiS~-g~~n---------~~~hP~~evl~~l~~~--g~~v~~ 279 (547)
T 2bib_A 224 MKFNHHHDT--N------KSNTKDFIKNLSPSLIVQTS-DSLP---------WKNGVDSEYVNWLKER--GIERIN 279 (547)
T ss_dssp EECTTTTBC--S------SSSCHHHHHHHCCSEEEESB-SSCS---------BSSSBCHHHHHHHHTT--TCEEEE
T ss_pred EEeccccCc--c------cCChHHHHHhcCCcEEEEcC-Cccc---------ccCCCCHHHHHHHHhC--CceEEE
Confidence 998753200 0 11235778888999988666 3322 1122445555555553 455543
No 29
>2r2d_A AGR_PTI_140P, Zn-dependent hydrolases; lactonase, N-acyl hompserine lactone, DI-nuclear zinc center quenching, AIIB, phosphate; HET: PO4; 1.75A {Agrobacterium tumefaciens}
Probab=99.30 E-value=3.1e-11 Score=111.17 Aligned_cols=149 Identities=13% Similarity=0.100 Sum_probs=91.9
Q ss_pred EEEEecCcEEEEEeCCeEEEEccccCCCCCC-Ccccccc-----cC----ccccc-hhhhhhhccccCCCCCCCCCcCEE
Q 018490 80 KLTYLEGNSWLWDLDGVKVLVDPILVGNLDF-GIPWLFD-----AG----KKFLK-SFQIVLIGMKTLVQLSDLPQVDCL 148 (355)
Q Consensus 80 ~itwlGhss~li~~~g~~iLiDP~~sg~~~~-p~~~~~~-----g~----~~r~~-~~~~~~~g~~~~~~~~~lp~iD~V 148 (355)
.-..++.+|++|+.++..||||+..+..... +..|... .+ .+.+. .+. . ..+++ .+||+|
T Consensus 37 ~~~~~~~~~~li~~~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~--~----~g~~~---~~i~~V 107 (276)
T 2r2d_A 37 RLIDIPVSAYLIQCTDATVLYDTGCHPECMGTNGRWPAQSQLNAPYIGASECNLPERLR--Q----LGLSP---DDISTV 107 (276)
T ss_dssp CEEEEEEEEEEEECSSCEEEECCCSCTTCSSTTCSSCHHHHHHSCBCCCTTCSHHHHHH--H----TTCCG---GGCSEE
T ss_pred ceEEeeeEEEEEECCCCCEEEECCCCcccccccccccHhHHhhcCCCCChhhCHHHHHH--H----cCCCH---HHCCEE
Confidence 3457788999999999999999965422100 0001000 00 00000 111 0 01222 268999
Q ss_pred EecCCCCCCCChhhHHHhhhcCCCceEEEcCChHHHHhhc---------------------CCceEEcC-CCceEEeCcc
Q 018490 149 LITQSLDDHCHLKTLKPLSKMSPNLKVIATPNAKTLLDPL---------------------FQNVTYVE-PGQSSEIEGR 206 (355)
Q Consensus 149 lISH~H~DHld~~tl~~l~~~~~~~~v~~~~~~~~~l~~~---------------------~~~v~~l~-~~e~~~l~~~ 206 (355)
++||.|+||+ +.+..+ +++++|+++.....+... ..++..++ .++.++++
T Consensus 108 ilTH~H~DH~--gg~~~~----~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~-- 179 (276)
T 2r2d_A 108 VLSHLHNDHA--GCVEYF----GKSRLIAHEDEFATAVRYFATGDHSSPYIVKDIEAWLATPRNWDLVGRDERERELA-- 179 (276)
T ss_dssp ECSCCSTTTS--TTGGGC----SSSEEEEEHHHHHHHHHHHHTTCCSSSSCHHHHHHHTTSCCCEEEECTTCCEEEEE--
T ss_pred EecCcccccC--CChhhC----CCCEEEECHHHHHHHhccccccccccccchHHhhhhccccccceeccCCCceeEec--
Confidence 9999999995 666666 379999998765543211 12456676 47788885
Q ss_pred cCCceEEEEE-ecCccCCCCCCCccEEEEEecCCceeEEEcCCCCCCcc
Q 018490 207 NGSKLRVKAT-AGPVLGPPWQRPENGYLVNSSQGQLTLYYEPHCVYNQN 254 (355)
Q Consensus 207 ~~~~l~i~~~-pa~~~g~~~~~~~~g~~i~~~~~~~~i~~sGDt~~~~~ 254 (355)
+++++..+ |++.. ...+|+++.++ +.+++|+||+.+...
T Consensus 180 --~~~~v~~~~pgHt~------g~~~~~~~~~~-~~~vl~~GD~~~~~~ 219 (276)
T 2r2d_A 180 --PGVNLLNFGTGHAS------GMLGLAVRLEK-QPGFLLVSDACYTAT 219 (276)
T ss_dssp --TTEEEEEEESSSSS------SEEEEEEECSS-SCEEEEEETTSCCHH
T ss_pred --CCEEEEeCCCCCCc------eeEEEEEEcCC-CceEEEEechhhhHH
Confidence 36899888 85421 24688888752 269999999998763
No 30
>1m2x_A Class B carbapenemase BLAB-1; alpha-beta/BETA-alpha fold., hydrolase; HET: MCO; 1.50A {Elizabethkingia meningoseptica} SCOP: d.157.1.1
Probab=99.29 E-value=1.5e-11 Score=109.99 Aligned_cols=171 Identities=12% Similarity=0.017 Sum_probs=106.1
Q ss_pred EecCcEEEEEeCCeEEEEccccCCCCCCCcccccccCccccchhhhhhhccccCCCCCCCCCcCEEEecCCCCCCCChhh
Q 018490 83 YLEGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQIVLIGMKTLVQLSDLPQVDCLLITQSLDDHCHLKT 162 (355)
Q Consensus 83 wlGhss~li~~~g~~iLiDP~~sg~~~~p~~~~~~g~~~r~~~~~~~~~g~~~~~~~~~lp~iD~VlISH~H~DHld~~t 162 (355)
+++.+|++|+.++..+||||..+. .. ...+ +..+.. ... .++|+|++||.|.||+ +.
T Consensus 24 ~~~~n~~li~~~~~~iLiD~G~~~-~~--~~~~-------~~~l~~----------~~g-~~i~~vi~TH~H~DH~--gg 80 (223)
T 1m2x_A 24 KYAANAVYLVTDKGVVVIDCPWGE-DK--FKSF-------TDEIYK----------KHG-KKVIMNIATHSHDDRA--GG 80 (223)
T ss_dssp EEEEEEEEEEETTEEEEESCCSSG-GG--HHHH-------HHHHHH----------HHC-CCEEEEECSSSSTTTT--TT
T ss_pred cccccEEEEEeCCEEEEEeCCCCh-hH--HHHH-------HHHHHH----------HhC-CCeEEEEeccCCcccc--Cc
Confidence 467899999999999999994321 00 0000 011110 001 2789999999999995 77
Q ss_pred HHHhhhcCCCceEEEcCChHHHHhhcC--CceEEcCCCceEEeCcccCCceEEEEEe-cC-ccCCCCCCCccEEEEEecC
Q 018490 163 LKPLSKMSPNLKVIATPNAKTLLDPLF--QNVTYVEPGQSSEIEGRNGSKLRVKATA-GP-VLGPPWQRPENGYLVNSSQ 238 (355)
Q Consensus 163 l~~l~~~~~~~~v~~~~~~~~~l~~~~--~~v~~l~~~e~~~l~~~~~~~l~i~~~p-a~-~~g~~~~~~~~g~~i~~~~ 238 (355)
+..+.+ +++++|+++.....++..+ .....++.++.+.++ +++++++. .. |+. ...++.++
T Consensus 81 ~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g-----~~~i~~~~~~pgHt~-----~~~~~~~~--- 145 (223)
T 1m2x_A 81 LEYFGK--IGAKTYSTKMTDSILAKENKPRAQYTFDNNKSFKVG-----KSEFQVYYPGKGHTA-----DNVVVWFP--- 145 (223)
T ss_dssp HHHHHH--TTCEEEEEHHHHHHHHHTTCCCCSEEESSCEEEEET-----TEEEEEECCCSSSSS-----SCCEEEET---
T ss_pred hhhHhh--CCCeEEEcHHHHHHHHhcCccCCceecCCCceEEEC-----CEEEEEEecCCCCCC-----CCEEEEEC---
Confidence 777776 4799999988877776653 234677888888887 67777662 32 321 13466653
Q ss_pred CceeEEEcCCCCCCcccccccCCcEEEEccccccCCCceeccCHHHHHHHHHHc--CCCEEEEeccCCc
Q 018490 239 GQLTLYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLAKLL--HAKFIVPMKNGDL 305 (355)
Q Consensus 239 ~~~~i~~sGDt~~~~~~~~~~~~Dl~~l~~g~~~~~~~~~h~~~~ea~~~~~~l--~~k~~ip~H~~~f 305 (355)
+.+++|+||..+.. +..++..++ ..+. ....++++.+..+ +.+.++|.|...+
T Consensus 146 -~~~~lf~GD~~~~~-----~~~~~~~~~-------~~~~-~~~~~sl~~l~~~~~~~~~i~pgHg~~~ 200 (223)
T 1m2x_A 146 -KEKVLVGGCIIKSA-----DSKDLGYIG-------EAYV-NDWTQSVHNIQQKFSGAQYVVAGHDDWK 200 (223)
T ss_dssp -TTTEEEEETTSCCT-----TCSSCCCCT-------TCCH-HHHHHHHHHHHHHTTTCSEEEESBSCCC
T ss_pred -CCCEEEEecccccC-----cccccccCC-------CCCH-HHHHHHHHHHHHhCCCCCEEEeCCCCcC
Confidence 24899999976542 112211111 1111 1234555555555 6789999998764
No 31
>3esh_A Protein similar to metal-dependent hydrolase; structural genomics, PSI-2, protein structure initiative; 2.50A {Staphylococcus aureus subsp}
Probab=99.29 E-value=9.6e-12 Score=115.35 Aligned_cols=186 Identities=8% Similarity=0.001 Sum_probs=110.0
Q ss_pred EEEecCcEEEEEeCCeEEEEccccCCCCCCCccc---ccccCccccc-hhhhhhhccccCCCCCCCCCcCEEEecCCCCC
Q 018490 81 LTYLEGNSWLWDLDGVKVLVDPILVGNLDFGIPW---LFDAGKKFLK-SFQIVLIGMKTLVQLSDLPQVDCLLITQSLDD 156 (355)
Q Consensus 81 itwlGhss~li~~~g~~iLiDP~~sg~~~~p~~~---~~~g~~~r~~-~~~~~~~g~~~~~~~~~lp~iD~VlISH~H~D 156 (355)
-..++.+|++|+.++..|||||..+.... ..++ +......++. .+. . ..+++ .+||+|++||.|.|
T Consensus 43 ~~~~~~n~~lI~~~~~~iLID~G~~~~~~-~~~~~~~~~~~~~~~l~~~l~--~----~g~~~---~~Id~IllTH~H~D 112 (280)
T 3esh_A 43 QINLPTHPILIQTAQYNLIIDAGIGNGKL-SEKQLRNFGVDEESHIIADLA--N----YNLTP---KDIDYVLMTHMHFD 112 (280)
T ss_dssp EEEEECCCEEEECSSCEEESCCTTCSSCS-CHHHHHHTTCSSCCCHHHHHH--T----TTCCT---TSCCEEECSCCCHH
T ss_pred eEEEeEEEEEEEECCEEEEEECCCCCccc-ccccccccCCcccchHHHHHH--H----cCCCH---HHCCEEEeCCCccc
Confidence 36789999999999999999995532100 0000 0000000011 111 0 11222 27899999999999
Q ss_pred CCChhhHHHhhh--cCCCceEEEcCChHHHHhhcC----------------CceEEcCCCceEEeCcccCCceEEEEEec
Q 018490 157 HCHLKTLKPLSK--MSPNLKVIATPNAKTLLDPLF----------------QNVTYVEPGQSSEIEGRNGSKLRVKATAG 218 (355)
Q Consensus 157 Hld~~tl~~l~~--~~~~~~v~~~~~~~~~l~~~~----------------~~v~~l~~~e~~~l~~~~~~~l~i~~~pa 218 (355)
| .+.+..+.+ .+|++++|+++....++.... .++..++.+ .++. .++++..+|+
T Consensus 113 H--igg~~~l~~~~~fp~a~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~----~gi~~~~~pG 184 (280)
T 3esh_A 113 H--AAGLTDQAGHAIFENAIHVVQQDEWHEFIAPNIRSKSTYWDKNKGDYSNKLILFEKH--FEPV----PGIKMQHSGG 184 (280)
T ss_dssp H--HGGGSCTTSCCSSTTCEEEEEHHHHHHHHSCCTTGGGTSCGGGCCGGGGGEEEESSE--ECSS----TTEEEEECCS
T ss_pred c--cCcccccccccCCCCCEEEECHHHHHHhhCcccccccchhhhhhhhhhheEEEeCCC--CeEc----CCEEEEEcCC
Confidence 9 588887776 557899999987766544310 123333322 2333 2688877766
Q ss_pred CccCCCCCCCccEEEEEecCCceeEEEcCCCCCCcccccccCCcEEEEccccccCCCceeccCHHHHHHHHHHc------
Q 018490 219 PVLGPPWQRPENGYLVNSSQGQLTLYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLAKLL------ 292 (355)
Q Consensus 219 ~~~g~~~~~~~~g~~i~~~~~~~~i~~sGDt~~~~~~~~~~~~Dl~~l~~g~~~~~~~~~h~~~~ea~~~~~~l------ 292 (355)
+.. ..++|+++.+ +.+++|+||+.+.... +.+|+. + .++ ++++++.+..+++
T Consensus 185 Ht~------g~~~~~i~~~--~~~vlftGD~~~~~~~---~~~d~~----~-----~~d--~d~~~~~~s~~~ll~~~~~ 242 (280)
T 3esh_A 185 HSF------GHTIITIESQ--GDKAVHMGDIFPTTAH---KNPLWV----T-----AYD--DYPMQSIREKERMIPYFIQ 242 (280)
T ss_dssp SST------TCEEEEEEET--TEEEEECGGGSCSGGG---CSTTCC----C-----TTC--SCHHHHHHHHHHHHHHHHH
T ss_pred CCc------ccEEEEEEEC--CcEEEEEEccCCchhh---cCCCcc----c-----ccc--CCHHHHHHHHHHHHHHHHh
Confidence 421 1368999876 6799999999886543 223321 0 122 3566655443322
Q ss_pred CCCEEEEeccCCcc
Q 018490 293 HAKFIVPMKNGDLD 306 (355)
Q Consensus 293 ~~k~~ip~H~~~f~ 306 (355)
....++|.|.....
T Consensus 243 ~~~~v~pgH~~~~~ 256 (280)
T 3esh_A 243 QQYWFLFYHDENYF 256 (280)
T ss_dssp TTCEEECSSCSSEE
T ss_pred CCCEEEEEccCCCc
Confidence 45689999987654
No 32
>3zdk_A 5' exonuclease apollo; hydrolase; HET: TLA; 2.16A {Homo sapiens}
Probab=99.27 E-value=9.1e-11 Score=112.08 Aligned_cols=133 Identities=14% Similarity=0.138 Sum_probs=93.7
Q ss_pred CcCEEEecCCCCCCCChhhHHHhhhcCCCceEEEcCChHHHHhhc-C---CceEEcCCCceEEeCc--ccCCceEEEEEe
Q 018490 144 QVDCLLITQSLDDHCHLKTLKPLSKMSPNLKVIATPNAKTLLDPL-F---QNVTYVEPGQSSEIEG--RNGSKLRVKATA 217 (355)
Q Consensus 144 ~iD~VlISH~H~DHld~~tl~~l~~~~~~~~v~~~~~~~~~l~~~-~---~~v~~l~~~e~~~l~~--~~~~~l~i~~~p 217 (355)
++|+|||||.|.||+ +++..+. ++++|+++.+.+.++.. + ..+..+++++.+.+.. ...++++|++++
T Consensus 24 ~i~ai~lTH~H~DHi--ggl~~l~----~~pVy~s~~t~~ll~~~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~v~~~~ 97 (336)
T 3zdk_A 24 TARLFFLSHMHSDHT--VGLSSTW----ARPLYCSPITAHLLHRHLQVSKQWIQALEVGESHVLPLDEIGQETMTVTLLD 97 (336)
T ss_dssp SSCEEECCCCCGGGS--TTCSTTC----CSCEEECHHHHHHHHHHHCCCTTTEEECCTTSEEEEESSSSSSCEEEEEEEE
T ss_pred CCCEEEECCChHHHH--CchHHHc----CCCEEecHHHHHHHHHhhhhcccceEecCCCCeEEecCcccccCCEEEEEEE
Confidence 789999999999995 6776654 58999999988876653 2 3578888888877621 012389999998
Q ss_pred cCccCCCCCCCccEEEEEecCCceeEEEcCCCCCCccccc------ccCCcEEEEccccccCCCceeccCHHHHHHHHHH
Q 018490 218 GPVLGPPWQRPENGYLVNSSQGQLTLYYEPHCVYNQNFLE------KERSDIIITPVIKQLLPKFTLVSGQEDAVKLAKL 291 (355)
Q Consensus 218 a~~~g~~~~~~~~g~~i~~~~~~~~i~~sGDt~~~~~~~~------~~~~Dl~~l~~g~~~~~~~~~h~~~~ea~~~~~~ 291 (355)
+.|.. ...+|+|+.+ +.+|+|+||+.+.+.... ..++|++++++.. ..+.+ .+.+.+++.+.+.+
T Consensus 98 ~~H~~-----gs~~~~i~~~--~~~i~~tGD~~~~~~~~~~~~l~~~~~vD~Li~DsT~-~~~~~-~~pse~~v~~~l~~ 168 (336)
T 3zdk_A 98 ANHCP-----GSVMFLFEGY--FGTILYTGDFRYTPSMLKEPALTLGKQIHTLYLDNTN-CNPAL-VLPSRQEAAHQIVQ 168 (336)
T ss_dssp CSSST-----TCEEEEEEET--TEEEEECCSCCCCGGGGGCGGGSSCCCCSEEEECCTB-CCTTC-CCCCHHHHHHHHHH
T ss_pred CCCCc-----ceEEEEEEeC--CceEEEeCCCCCCcccccchhhhccCCccEEEEecCC-CCCCC-CCCCHHHHHHHHHH
Confidence 87631 2468999987 579999999998775432 2489999999853 22211 13355555444443
No 33
>3adr_A Putative uncharacterized protein ST1585; quorum sensing, quinolone signal, metallo-beta-lactamase FOL conserved hypothetical protein; HET: EPE; 1.80A {Sulfolobus tokodaii}
Probab=99.27 E-value=5.4e-11 Score=108.57 Aligned_cols=161 Identities=17% Similarity=0.194 Sum_probs=102.9
Q ss_pred cEEEEEeCCeEEEEccccCCCCCCCcccccccCccccchhhhhhhccccCCCCCCCCCcCEEEecCCCCCCCChhhHHHh
Q 018490 87 NSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQIVLIGMKTLVQLSDLPQVDCLLITQSLDDHCHLKTLKPL 166 (355)
Q Consensus 87 ss~li~~~g~~iLiDP~~sg~~~~p~~~~~~g~~~r~~~~~~~~~g~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~l 166 (355)
+|++|+.++..+||||..+ . ..+ . +.. ..++|+|++||.|.||+ +++..+
T Consensus 21 ~~~li~~~~~~iLiD~G~~---~-~~~-----------~-----------l~~--~~~i~~vi~TH~H~DH~--gg~~~l 70 (261)
T 3adr_A 21 TVYVMCGEKLTVMIDAGVS---N-SIA-----------D-----------FSF--LDKLDYIVLTHLHIDHI--GLLPEL 70 (261)
T ss_dssp EEEEEECSSCEEEECCCCT---T-CCC-----------C-----------CTT--CSCCCEEECSCCSGGGT--TTHHHH
T ss_pred EEEEEEcCCcEEEEeCCCC---C-Chh-----------h-----------cCC--CCCCcEEEECCCCcccc--CCHHHH
Confidence 5899987688999999332 1 000 1 112 34799999999999995 788888
Q ss_pred hhcCCCceEEEcCChHHHHhh---------------------cC--------CceEEcCCCceEEeCcccCCceEEEEEe
Q 018490 167 SKMSPNLKVIATPNAKTLLDP---------------------LF--------QNVTYVEPGQSSEIEGRNGSKLRVKATA 217 (355)
Q Consensus 167 ~~~~~~~~v~~~~~~~~~l~~---------------------~~--------~~v~~l~~~e~~~l~~~~~~~l~i~~~p 217 (355)
.+++ ++++|+++.....+.. ++ .++..++.++.+.++ +++|++++
T Consensus 71 ~~~~-~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g-----~~~i~~~~ 144 (261)
T 3adr_A 71 LQVY-KAKVLVKSGFKKYLTSEDGLKKLNESAEKVLGDLYYVYGGLEKKLDQDKVIEVEGNEEFDLG-----GYRMRLIY 144 (261)
T ss_dssp HHHS-CCEEEEETTCTHHHHSHHHHHHHHHHHHHHHTHHHHHHCCCCSCCCGGGEEEECSCCEEECS-----SSEEEEEE
T ss_pred HHHh-CCeEEECHHHHHHhcCchhHHHHHHHHHHHHHHHHHHhcccccCCCccceEecCCCCEEEEC-----CEEEEEEE
Confidence 8765 7899998876543321 11 135678889888887 76776665
Q ss_pred cC-ccCCCCCCCccEEEEEecCCceeEEEcCCCCCCcccccccCCcEEEEccccccCCCceeccCHHHHHHHHHHcCCCE
Q 018490 218 GP-VLGPPWQRPENGYLVNSSQGQLTLYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLAKLLHAKF 296 (355)
Q Consensus 218 a~-~~g~~~~~~~~g~~i~~~~~~~~i~~sGDt~~~~~~~~~~~~Dl~~l~~g~~~~~~~~~h~~~~ea~~~~~~l~~k~ 296 (355)
.. |+. ...+|.+ . +++|+||+.+... . ..+ .+. ..+.++ +....++++.+++++++.
T Consensus 145 ~pGHt~-----~~~~~~~--~----~~lf~GD~~~~~~-~-----~~~-~~~---~~~~~~-~~~~~~sl~~l~~l~~~~ 202 (261)
T 3adr_A 145 TPGHAR-----HHMSVLV--D----DFLFTGDSAGAYF-N-----GVV-IPT---TPPVID-YKMYMESLKRQIELKPKV 202 (261)
T ss_dssp CTTSCT-----TCEEEEE--T----TEEEEETSSCEEE-T-----TEE-ECC---CCSCCC-HHHHHHHHHHHHHTCCSE
T ss_pred CCCCCC-----ccEEEEE--C----CEEEEcCcccccc-c-----ccc-cCC---CCCCCC-HHHHHHHHHHHHcCCCCE
Confidence 43 321 1245542 2 7999999987432 0 111 111 111111 123467777888889999
Q ss_pred EEEeccCCc
Q 018490 297 IVPMKNGDL 305 (355)
Q Consensus 297 ~ip~H~~~f 305 (355)
++|.|.+.+
T Consensus 203 v~~~H~~~~ 211 (261)
T 3adr_A 203 VGFAHGGLV 211 (261)
T ss_dssp EEETTTEEE
T ss_pred EEeCCCCcc
Confidence 999998753
No 34
>4efz_A Metallo-beta-lactamase family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.60A {Burkholderia pseudomallei}
Probab=99.24 E-value=5.1e-11 Score=111.68 Aligned_cols=186 Identities=15% Similarity=0.113 Sum_probs=110.8
Q ss_pred CCceEEEEe-----cCcEEEEEe--CCeEEEEccccCCCCCCCcccccccCccccc-hhhhhhhccccCCCCCCCCCcCE
Q 018490 76 TDVFKLTYL-----EGNSWLWDL--DGVKVLVDPILVGNLDFGIPWLFDAGKKFLK-SFQIVLIGMKTLVQLSDLPQVDC 147 (355)
Q Consensus 76 ~~~~~itwl-----Ghss~li~~--~g~~iLiDP~~sg~~~~p~~~~~~g~~~r~~-~~~~~~~g~~~~~~~~~lp~iD~ 147 (355)
++.|.|..+ |++||+|.. ++..+||||.+.-..... .... +...++. .+. ...+ +|++
T Consensus 2 pg~m~i~~~~~~~~~~~~yli~~~~~~~~ilID~g~~~~~~~~-~~~~-~~~~~l~~~l~-----------~~g~-~i~~ 67 (298)
T 4efz_A 2 PGSMTVEGFFDPATCTISYLLFDSGSGECALIDSVLDYDPKSG-RTRT-ASADQLIARVA-----------ALGA-RVRW 67 (298)
T ss_dssp BCSCEEEEEECTTTCBEEEEEECTTTCEEEEESCCBEEETTTT-EEEC-HHHHHHHHHHH-----------HHTC-EEEE
T ss_pred CCceEEEEEecCCcccEEEEEEECCCCeEEEEcCCCCcccccc-ccCc-ccHHHHHHHHH-----------HCCC-cceE
Confidence 466888776 889999976 678999999653100000 0000 0000111 111 1122 5899
Q ss_pred EEecCCCCCCCChhhHHHhhhcCCCceEEEcCChHHHHhhc----C----------CceEEcCCCceEEeCcccCCceEE
Q 018490 148 LLITQSLDDHCHLKTLKPLSKMSPNLKVIATPNAKTLLDPL----F----------QNVTYVEPGQSSEIEGRNGSKLRV 213 (355)
Q Consensus 148 VlISH~H~DHld~~tl~~l~~~~~~~~v~~~~~~~~~l~~~----~----------~~v~~l~~~e~~~l~~~~~~~l~i 213 (355)
||+||.|.||+ +++..|.+++ ++++|+++.....++.+ + .....+..|+++.++ +++|
T Consensus 68 Il~TH~H~DH~--gg~~~l~~~~-~a~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~g-----~~~i 139 (298)
T 4efz_A 68 LLETHVHADHL--SAAPYLKTRV-GGEIAIGRHVTRVQDVFGKLFNAGPAFAHDGSQFDRLLDDGDTLALG-----ALSI 139 (298)
T ss_dssp EECSSCCSSSB--CCHHHHHHHH-CCEEEEETTHHHHHHHHHHHTTCCTTSCSSSTTSSEEECTTCEEEET-----TEEE
T ss_pred EEECCCchhhh--hhHHHHHHHh-CCcEEEChhHHHHHHHHHHhcCCcccccccccCCCEEeCCCCEEEEC-----CEEE
Confidence 99999999995 7888888765 79999998866544432 1 113678889999998 6666
Q ss_pred EEEecC-ccCCCCCCCccEEEEEecCCcee------EEEcCCCCCCcccccccCCcEEEEccccccCCCceeccCHHHHH
Q 018490 214 KATAGP-VLGPPWQRPENGYLVNSSQGQLT------LYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAV 286 (355)
Q Consensus 214 ~~~pa~-~~g~~~~~~~~g~~i~~~~~~~~------i~~sGDt~~~~~~~~~~~~Dl~~l~~g~~~~~~~~~h~~~~ea~ 286 (355)
++++.. |+. ...+|++... +.+ ++|+||+.+....-- +..|+ +..+. ...-+++
T Consensus 140 ~vi~tPGHT~-----g~~~~~~~~~--~~~~~~~~~~lftGD~l~~~~~g~-~r~d~----------~~~d~-~~~~~Sl 200 (298)
T 4efz_A 140 RAMHTPGHTP-----ACMTYVVTEA--HAAHDARDAAAFVGDTLFMPDYGT-ARCDF----------PGGDA-RSLYRSI 200 (298)
T ss_dssp EEEECCSSST-----TCEEEEEEET--TCCGGGCBCEEECCSSBCCTTTCB-CCCCS----------TTCCH-HHHHHHH
T ss_pred EEEECCCCCc-----ccEEEEECCC--cccccCCceEEEEcCccccCCCCC-ccCCC----------CCCCH-HHHHHHH
Confidence 655443 221 2468888875 334 999999977542210 01111 11110 0123444
Q ss_pred HHHHHcCCC-EEEEecc
Q 018490 287 KLAKLLHAK-FIVPMKN 302 (355)
Q Consensus 287 ~~~~~l~~k-~~ip~H~ 302 (355)
+.+..|.++ +++|.|.
T Consensus 201 ~kl~~L~~~~~v~pgHg 217 (298)
T 4efz_A 201 RKVLSLPPATRLYMCHD 217 (298)
T ss_dssp HHHTTSCTTCEEECSBC
T ss_pred HHHhcCCCCEEEECCCC
Confidence 555566777 7999996
No 35
>1p9e_A Methyl parathion hydrolase; Zn containing; 2.40A {Pseudomonas SP} SCOP: d.157.1.5
Probab=99.23 E-value=1.3e-11 Score=117.71 Aligned_cols=176 Identities=18% Similarity=0.138 Sum_probs=102.9
Q ss_pred ecCcEEEEEeCCeEEEEccccCCCCCCCcccccccCccccchhhhhhhccccCCCCCCCCCcCEEEecCCCCCCCChhhH
Q 018490 84 LEGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQIVLIGMKTLVQLSDLPQVDCLLITQSLDDHCHLKTL 163 (355)
Q Consensus 84 lGhss~li~~~g~~iLiDP~~sg~~~~p~~~~~~g~~~r~~~~~~~~~g~~~~~~~~~lp~iD~VlISH~H~DHld~~tl 163 (355)
++.+|+||+.++..||||+..+.. ++ +.. .+-...+.. ..++++ +||+|++||.|.||+ +.+
T Consensus 95 ~~~n~~LI~~~~~~iLIDtG~~~~--~~-~~~----~~l~~~L~~------~Gi~~~---~Id~VilTH~H~DHi--ggl 156 (331)
T 1p9e_A 95 TSVTGYLVNTGSKLVLVDTGAAGL--FG-PTL----GRLAANLKA------AGYQPE---QVDEIYITHMHPDHV--GGL 156 (331)
T ss_dssp EEEEEEEEECSSCEEEECCCCTTS--SC-TTC----CCHHHHHHH------TTCCGG---GCCEEECSCCCHHHH--GGG
T ss_pred EEEEEEEEEECCEEEEEECCCCCc--CC-cch----hHHHHHHHH------cCCCHH---HCCEEEeCCcccccC--Ccc
Confidence 345699999999999999954311 00 000 000011110 112222 689999999999994 666
Q ss_pred HH-hhhcCCCceEEEcCChHHHHhhc---------------------------CCceEEcCCCceEEeCcccCCceEEEE
Q 018490 164 KP-LSKMSPNLKVIATPNAKTLLDPL---------------------------FQNVTYVEPGQSSEIEGRNGSKLRVKA 215 (355)
Q Consensus 164 ~~-l~~~~~~~~v~~~~~~~~~l~~~---------------------------~~~v~~l~~~e~~~l~~~~~~~l~i~~ 215 (355)
.. +...++++++|+++...+++... ..++..++.++++ . .++++..
T Consensus 157 ~~~~~~~fp~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i--~----~gi~vi~ 230 (331)
T 1p9e_A 157 MVGEQLAFPNAVVRADQKEADFWLSQTNLDKAPDDESKGFFKGAMASLNPYVKAGKFKPFSGNTDL--V----PGIKALA 230 (331)
T ss_dssp EETTEESSTTCEEECBHHHHHHHSCHHHHTTCSSTTSCHHHHHHHHHHHHHHHTTCBCCBCSSEEC--S----TTEEEEE
T ss_pred cccccccCCCCEEEECHHHHHHHhCchhhccCchhhhhHHHHHHHHHhhhhcccCceEEeCCCCEE--c----ccEEEEE
Confidence 53 23345789999987765533210 1234455555433 2 2578877
Q ss_pred EecCccCCCCCCCccEEEEEecCCceeEEEcCCCCCCcccccccCCcEEEEccccccCCCceeccCHHHHHHHHHHc---
Q 018490 216 TAGPVLGPPWQRPENGYLVNSSQGQLTLYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLAKLL--- 292 (355)
Q Consensus 216 ~pa~~~g~~~~~~~~g~~i~~~~~~~~i~~sGDt~~~~~~~~~~~~Dl~~l~~g~~~~~~~~~h~~~~ea~~~~~~l--- 292 (355)
+|++.. ...+|+++.+ +.+++|+||+.+.... ....+|+. . .+ .++++++++..+.+
T Consensus 231 tpGHtp------G~~~~~i~~~--~~~vlf~GD~~~~~~~-~~~~p~~~---~------~~--d~d~~~~~~s~~~ll~~ 290 (331)
T 1p9e_A 231 SHGHTP------GHTTYVVESQ--GQKLALLGDLILVAAV-QFDDPSVT---T------QL--DSDSKSVAVERKKAFAD 290 (331)
T ss_dssp CTTSST------TCEEEEEEET--TEEEEECTTSCCCHHH-HTTCTTCC---B------TT--CSSHHHHHHHHHHHHHH
T ss_pred cCCCCh------hCEEEEEEEC--CcEEEEEECccCcchh-cccCCCce---e------cc--cCCHHHHHHHHHHHHHH
Confidence 776421 1468999876 5799999999986532 12233321 0 11 23666666555443
Q ss_pred ---CCCEEEEeccC
Q 018490 293 ---HAKFIVPMKNG 303 (355)
Q Consensus 293 ---~~k~~ip~H~~ 303 (355)
....++|.|..
T Consensus 291 ~~~~~~~v~~~H~~ 304 (331)
T 1p9e_A 291 AAKGGYLIAASHLS 304 (331)
T ss_dssp HHHHTCEEECTTSS
T ss_pred HhcCCCEEEEECCC
Confidence 35679999974
No 36
>1k07_A FEZ-1 beta-lactamase; monomer with alpha-beta/BETA-alpha fold. two monomers PER AS UNIT., hydrolase; HET: GOL; 1.65A {Fluoribacter gormanii} SCOP: d.157.1.1 PDB: 1jt1_A* 1l9y_A
Probab=99.23 E-value=4.6e-11 Score=109.52 Aligned_cols=177 Identities=12% Similarity=0.123 Sum_probs=107.9
Q ss_pred cCcEEEEEeCCeEEEEccccCCCCCCCcccccccCccccchhhhhhhccccCCCCCCCCCcCEEEecCCCCCCCChhhHH
Q 018490 85 EGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQIVLIGMKTLVQLSDLPQVDCLLITQSLDDHCHLKTLK 164 (355)
Q Consensus 85 Ghss~li~~~g~~iLiDP~~sg~~~~p~~~~~~g~~~r~~~~~~~~~g~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~ 164 (355)
+.+|++|+.++..|||||... .. ...+. ..++. ..+++ .+|++|++||.|.|| .+.+.
T Consensus 24 ~~n~~li~~~~~~iLID~G~~--~~--~~~l~----~~l~~---------~g~~~---~~i~~IilTH~H~DH--~gg~~ 81 (263)
T 1k07_A 24 DLASYLIVTPRGNILINSDLE--AN--VPMIK----ASIKK---------LGFKF---SDTKILLISHAHFDH--AAGSE 81 (263)
T ss_dssp SBCCEEEEETTEEEEECCCCG--GG--HHHHH----HHHHH---------TTCCG---GGEEEEECSSSSHHH--HTTHH
T ss_pred CeEEEEEEeCCceEEEECCCc--cc--HHHHH----HHHHH---------cCCCH---HHCcEEEeCCCCccc--cccHH
Confidence 478999999999999999332 01 01110 00111 01111 268999999999999 57888
Q ss_pred HhhhcCCCceEEEcCChHHHHhhc-------C----------CceEEcCCCceEEeCcccCCceEEEEEecC-ccCCCCC
Q 018490 165 PLSKMSPNLKVIATPNAKTLLDPL-------F----------QNVTYVEPGQSSEIEGRNGSKLRVKATAGP-VLGPPWQ 226 (355)
Q Consensus 165 ~l~~~~~~~~v~~~~~~~~~l~~~-------~----------~~v~~l~~~e~~~l~~~~~~~l~i~~~pa~-~~g~~~~ 226 (355)
.|.+.. ++++|+++.....++.. + .....+..++.+.++ +++|++++.. |+.
T Consensus 82 ~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g-----~~~i~~i~~pGHt~---- 151 (263)
T 1k07_A 82 LIKQQT-KAKYMVMDEDVSVILSGGKSDFHYANDSSTYFTQSTVDKVLHDGERVELG-----GTVLTAHLTPGHTR---- 151 (263)
T ss_dssp HHHHHH-CCEEEEEHHHHHHHHTTTTTCTTTTTCGGGCCCCCCCSEEECTTCEEEET-----TEEEEEEECCSSST----
T ss_pred HHHHhc-CCEEEEcHHHHHHHhcccccccccCccccccCCCCCcceEeCCCCEEEEC-----CeEEEEEECCCCCC----
Confidence 887653 78999998777655431 1 234677888888887 6666555432 321
Q ss_pred CCccEEEEEecCCc--eeEEEcCCCCCCcccccccCCcEEEEccccccCCCceeccCHHHHHHHHHHcCCCEEEEeccCC
Q 018490 227 RPENGYLVNSSQGQ--LTLYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLAKLLHAKFIVPMKNGD 304 (355)
Q Consensus 227 ~~~~g~~i~~~~~~--~~i~~sGDt~~~~~~~~~~~~Dl~~l~~g~~~~~~~~~h~~~~ea~~~~~~l~~k~~ip~H~~~ 304 (355)
...+|+++..+.+ .+++|+||+++.....-.+.. ..+. .+ ....++++.++.+.++.++|.|...
T Consensus 152 -g~~~~~~~~~~~~~~~~~lf~GD~~~~~~~~~~~~~----------~~~~-~~-~~~~~sl~~l~~l~~~~i~pgHg~~ 218 (263)
T 1k07_A 152 -GCTTWTMKLKDHGKQYQAVIIGSIGVNPGYKLVDNI----------TYPK-IA-EDYKHSIKVLESMRCDIFLGSHAGM 218 (263)
T ss_dssp -TCEEEEEEEEETTEEEEEEEECCCCCCTTCCCSSCS----------SCTT-HH-HHHHHHHHHHHTBCCSEEEESBHHH
T ss_pred -CcEEEEEecccCCceeEEEEECCcccCCCccccCCC----------cCcc-cH-HHHHHHHHHHHccCCCEEEcCCCcc
Confidence 2357888763112 379999998763221000000 0000 00 1235566677788999999999876
Q ss_pred cc
Q 018490 305 LD 306 (355)
Q Consensus 305 f~ 306 (355)
+.
T Consensus 219 ~~ 220 (263)
T 1k07_A 219 FD 220 (263)
T ss_dssp HT
T ss_pred cc
Confidence 54
No 37
>4ad9_A Lactb2, beta-lactamase-like protein 2; hydrolase, metallo-beta lactamase, mitochondria; 2.60A {Homo sapiens}
Probab=99.22 E-value=3.8e-11 Score=111.76 Aligned_cols=170 Identities=13% Similarity=0.182 Sum_probs=106.5
Q ss_pred EecCcEEEEEeCCeEEEEccccCCCCCCCcccccccCccccchhhhhhhccccCCCCCCCCCcCEEEecCCCCCCCChhh
Q 018490 83 YLEGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQIVLIGMKTLVQLSDLPQVDCLLITQSLDDHCHLKT 162 (355)
Q Consensus 83 wlGhss~li~~~g~~iLiDP~~sg~~~~p~~~~~~g~~~r~~~~~~~~~g~~~~~~~~~lp~iD~VlISH~H~DHld~~t 162 (355)
+-|.|||+|+.++..|||||... ..+ .+. +.+... +..... +||+|++||.|.|| .+.
T Consensus 29 ~~~~n~~li~~~~~~ilID~G~~---~~~-~~~-----~~l~~~----------l~~~~~-~i~~Ii~TH~H~DH--~gg 86 (289)
T 4ad9_A 29 LQGTNTYLVGTGPRRILIDTGEP---AIP-EYI-----SCLKQA----------LTEFNT-AIQEIVVTHWHRDH--SGG 86 (289)
T ss_dssp BTCCEEEEECSSSSEEEECCCST---TCH-HHH-----HHHHHH----------HHHTTC-CEEEEECSCSSHHH--HTT
T ss_pred CCceEEEEEecCCceEEEeCCCC---CCh-HHH-----HHHHHH----------HHHcCC-CceEEEEcCCCCcc--ccc
Confidence 56899999999889999999432 101 011 001110 001122 68999999999999 688
Q ss_pred HHHhhhcC---CCceEEEcCChHH---HHhhcCCceEEcCCCceEEeCcccCCceEEEEEecC-ccCCCCCCCccEEEEE
Q 018490 163 LKPLSKMS---PNLKVIATPNAKT---LLDPLFQNVTYVEPGQSSEIEGRNGSKLRVKATAGP-VLGPPWQRPENGYLVN 235 (355)
Q Consensus 163 l~~l~~~~---~~~~v~~~~~~~~---~l~~~~~~v~~l~~~e~~~l~~~~~~~l~i~~~pa~-~~g~~~~~~~~g~~i~ 235 (355)
+..|.+.+ ++++++..+.... .+.........+..|+.+.++ +.+++++++. |+. ...+|.++
T Consensus 87 ~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g-----g~~~~~~~~pGHt~-----~~~~~~~~ 156 (289)
T 4ad9_A 87 IGDICKSINNDTTYCIKKLPRNPQREEIIGNGEQQYVYLKDGDVIKTE-----GATLRVLYTPGHTD-----DHMALLLE 156 (289)
T ss_dssp HHHHHHHSCCSSCCCEEECCCSSCCCCCBTTTTBCEEECCTTCEEEET-----TEEEEEEECCSSST-----TCEEEEET
T ss_pred HHHHHHhhccCCCceEEecCCCcchhhhccCCCCceEEcCCCCEEEeC-----CeEEEEEECCCCCC-----CCEEEEEc
Confidence 88888765 4678888765421 111112457889999999997 6666555432 321 13466664
Q ss_pred ecCCceeEEEcCCCCCCcccccccCCcEEEEccccccCCCceeccCHHHHHHHHHHcCCCEEEEeccCCcc
Q 018490 236 SSQGQLTLYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLAKLLHAKFIVPMKNGDLD 306 (355)
Q Consensus 236 ~~~~~~~i~~sGDt~~~~~~~~~~~~Dl~~l~~g~~~~~~~~~h~~~~ea~~~~~~l~~k~~ip~H~~~f~ 306 (355)
. .+++|+||+.+..... ..... ....++++.+..+.++.++|.|...+.
T Consensus 157 ~----~~~lftGD~~~~~~~~---------------~~~~~---~~~~~sl~~l~~l~~~~v~pgHg~~~~ 205 (289)
T 4ad9_A 157 E----ENAIFSGDCILGEGTT---------------VFEDL---YDYMNSLKELLKIKADIIYPGHGPVIH 205 (289)
T ss_dssp T----TTEEEEETSSCSSSCC---------------CCSCH---HHHHHHHHHHHHHTCSEEEESSSSCBS
T ss_pred C----CCEEEEecccCCCCCc---------------CcCCH---HHHHHHHHHHHcCCCCEEEeCCCChhc
Confidence 2 3799999987643110 00000 023456677778899999999988764
No 38
>2xf4_A Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A {Salmonella enterica}
Probab=99.21 E-value=5.8e-12 Score=111.49 Aligned_cols=166 Identities=16% Similarity=0.196 Sum_probs=100.9
Q ss_pred EEEecCcEEEEEe--CCeEEEEccccCCCCCCCcccccccCccccchhhhhhhccccCCCCCCCCCcCEEEecCCCCCCC
Q 018490 81 LTYLEGNSWLWDL--DGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQIVLIGMKTLVQLSDLPQVDCLLITQSLDDHC 158 (355)
Q Consensus 81 itwlGhss~li~~--~g~~iLiDP~~sg~~~~p~~~~~~g~~~r~~~~~~~~~g~~~~~~~~~lp~iD~VlISH~H~DHl 158 (355)
+.+++.+|++|+. ++..+|||| |. . ...+ ...+. ...+ ++|+|++||.|.||
T Consensus 8 ~~~~~~n~~li~~~~~~~~iLiD~---G~-~--~~~l-------~~~l~-----------~~g~-~i~~ii~TH~H~DH- 61 (210)
T 2xf4_A 8 VTAFSQNCSLIWCEQTRLAALVDP---GG-D--AEKI-------KQEVD-----------ASGV-TLMQILLTHGHLDH- 61 (210)
T ss_dssp ETTTTEEEEEEECTTTCEEEEECC---CS-C--HHHH-------HHHHH-----------HHTC-EEEEEECSCSCHHH-
T ss_pred eCCcccEEEEEEecCCCcEEEEcC---CC-C--HHHH-------HHHHH-----------HcCC-ceeEEEECCCChhh-
Confidence 4567899999984 688999999 42 1 0111 01111 0112 48999999999999
Q ss_pred ChhhHHHhhhcCCCceEEEcCChHHHHhh--------cC-------CceEEcCCCceEEeCcccCCceEEEEEecC-ccC
Q 018490 159 HLKTLKPLSKMSPNLKVIATPNAKTLLDP--------LF-------QNVTYVEPGQSSEIEGRNGSKLRVKATAGP-VLG 222 (355)
Q Consensus 159 d~~tl~~l~~~~~~~~v~~~~~~~~~l~~--------~~-------~~v~~l~~~e~~~l~~~~~~~l~i~~~pa~-~~g 222 (355)
.+.+..+.+++ ++++|+++.....+.+ ++ .....++.++.+.++ ++++++++.. |+.
T Consensus 62 -~gg~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g-----~~~i~~~~~pgHt~ 134 (210)
T 2xf4_A 62 -VGAASELAQHY-GVPVIGPEKEDEFWLQGLPAQSRMFGLDECQPLTPDRWLNDGDRVSVG-----NVTLQVLHCPGHTP 134 (210)
T ss_dssp -HTTHHHHHHHH-TCCEECCCGGGHHHHHTHHHHHHHTTCCCCCCCCCSBCCCTTCEEEET-----TEEEEEEECCSSST
T ss_pred -hcCHHHHHHHc-CCcEEEecchHHHHhccchhhhhhcCCcccCCCCCceEECCCCEEEEC-----CeEEEEEECCCCCC
Confidence 57888887654 6899998876554322 22 123567788888987 6666665443 221
Q ss_pred CCCCCCccEEEEEecCCceeEEEcCCCCCCcccccccCCcEEEEccccccCCCceeccCHHHHHH----HHHHcCCC-EE
Q 018490 223 PPWQRPENGYLVNSSQGQLTLYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVK----LAKLLHAK-FI 297 (355)
Q Consensus 223 ~~~~~~~~g~~i~~~~~~~~i~~sGDt~~~~~~~~~~~~Dl~~l~~g~~~~~~~~~h~~~~ea~~----~~~~l~~k-~~ 297 (355)
...++.++ +.+++|+||+.+...+ +..| .+.. +.++..+ .++.+.++ ++
T Consensus 135 -----g~~~~~~~----~~~~lf~GD~~~~~~~---~~~~----------~~~~----~~~~~~~sl~~~l~~l~~~~~v 188 (210)
T 2xf4_A 135 -----GHVVFFDE----QSQLLISGDVIFKGGV---GRSD----------FPRG----DHTQLIDAIKRKLLPLGDDVTF 188 (210)
T ss_dssp -----TCEEEEET----TTTEEEEETSEETTEE---CCCC----------STTC----CHHHHHHHHHHHTGGGCTTCEE
T ss_pred -----CcEEEEeC----CCCEEEECCEeccCCc---CCCC----------CCCC----CHHHHHHHHHHHHhcCCCCeEE
Confidence 12455553 3589999999775421 1111 1111 3333333 34456666 78
Q ss_pred EEeccCCc
Q 018490 298 VPMKNGDL 305 (355)
Q Consensus 298 ip~H~~~f 305 (355)
+|.|....
T Consensus 189 ~pgHg~~~ 196 (210)
T 2xf4_A 189 IPGHGPLS 196 (210)
T ss_dssp EESSSCCE
T ss_pred ECCCCCcc
Confidence 99997643
No 39
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3
Probab=99.20 E-value=2.3e-11 Score=118.29 Aligned_cols=178 Identities=15% Similarity=0.123 Sum_probs=108.6
Q ss_pred cCcEEEEEeCCeEEEEccccCCCCCCCcccccccCccccchhhhhhhccccCCCCCCCCCcCEEEecCCCCCCCChhhHH
Q 018490 85 EGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQIVLIGMKTLVQLSDLPQVDCLLITQSLDDHCHLKTLK 164 (355)
Q Consensus 85 Ghss~li~~~g~~iLiDP~~sg~~~~p~~~~~~g~~~r~~~~~~~~~g~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~ 164 (355)
+.+|++|+ ++..+||||..+ .+. ..+ +..+. ..+ +..+||+|++||.|.|| .+++.
T Consensus 34 ~~n~~li~-~~~~iliD~G~~---~~~-~~~-------~~~l~-------~~~---~~~~i~~iiiTH~H~DH--~gg~~ 89 (402)
T 1e5d_A 34 TYNAYLVE-DEKTTLFDTVKA---EYK-GEL-------LCGIA-------SVI---DPKKIDYLVIQHLELDH--AGALP 89 (402)
T ss_dssp EEEEEEEC-SSSCEEECCCCG---GGH-HHH-------HHHHH-------TTS---CGGGCCEEEECCCSHHH--HTTHH
T ss_pred ceEEEEEE-CCCEEEEeCCCC---ccH-HHH-------HHHHH-------HhC---CcccCCEEEeCCCCccc--cccHH
Confidence 35689999 678999999432 100 001 11111 011 22378999999999999 57888
Q ss_pred HhhhcCCCceEEEcCChHHHHhhc-C---CceEEcCCCceEEeCcccCCceEEEEEecC--ccCCCCCCCccEEEEEecC
Q 018490 165 PLSKMSPNLKVIATPNAKTLLDPL-F---QNVTYVEPGQSSEIEGRNGSKLRVKATAGP--VLGPPWQRPENGYLVNSSQ 238 (355)
Q Consensus 165 ~l~~~~~~~~v~~~~~~~~~l~~~-~---~~v~~l~~~e~~~l~~~~~~~l~i~~~pa~--~~g~~~~~~~~g~~i~~~~ 238 (355)
.|.+++|++++|+++.....++.. + .++..++.++++.++ +++++++++. |+. ...++.+ +
T Consensus 90 ~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g-----~~~~~~~~~p~gH~~-----~~~~~~~--~- 156 (402)
T 1e5d_A 90 ALIEACQPEKIFTSSLGQKAMESHFHYKDWPVQVVKHGETLSLG-----KRTVTFYETRMLHWP-----DSMVSWF--A- 156 (402)
T ss_dssp HHHHHHCCSEEEEEHHHHHHHHHHHCCSSCCEEEECTTCEEECS-----SCEEEEEECTTSSST-----TCEEEEE--T-
T ss_pred HHHHHCCCCEEEEChHHHHHHHHHhCCCCCceEEcCCCCEEEEC-----CCEEEEEeCCCCCCC-----CcEEEEE--C-
Confidence 887766789999999887777654 2 367889999999997 6666666543 321 1234444 3
Q ss_pred CceeEEEcCCCCCCcccccccCCcEEEEccc---cccCC----Cc-----eeccCHHHHHHHHHH--cCCCEEEEeccCC
Q 018490 239 GQLTLYYEPHCVYNQNFLEKERSDIIITPVI---KQLLP----KF-----TLVSGQEDAVKLAKL--LHAKFIVPMKNGD 304 (355)
Q Consensus 239 ~~~~i~~sGDt~~~~~~~~~~~~Dl~~l~~g---~~~~~----~~-----~~h~~~~ea~~~~~~--l~~k~~ip~H~~~ 304 (355)
+.+++|+||+.... +..|. +++.. ..+.. .+ .......++++.++. +++++++|.|...
T Consensus 157 -~~~~l~~GD~~~~~-----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~~i~p~Hg~~ 229 (402)
T 1e5d_A 157 -DEKVLISNDIFGQN-----IAASE-RFSDQIPVHTLERAMREYYANIVNPYAPQTLKAIETLVGAGVAPEFICPDHGVI 229 (402)
T ss_dssp -TTTEEEEETTTCCC-----CCCSC-CBGGGSCHHHHHHHHHHHHHHHTGGGHHHHHHHHHHHHHTTCCCSEEEESSSCB
T ss_pred -CCCEEEecccccCc-----ccccc-ccccccchhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhCCCCcCEEecCCcce
Confidence 35899999995421 11111 11110 00000 00 001112567777788 8889999999765
Q ss_pred cc
Q 018490 305 LD 306 (355)
Q Consensus 305 f~ 306 (355)
+.
T Consensus 230 ~~ 231 (402)
T 1e5d_A 230 FR 231 (402)
T ss_dssp EE
T ss_pred ee
Confidence 54
No 40
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A*
Probab=99.18 E-value=1.4e-10 Score=112.66 Aligned_cols=184 Identities=16% Similarity=0.117 Sum_probs=108.7
Q ss_pred cEEEEEeCCeEEEEccccCCCCCCCcccccccCccccchhhhhhhccccCCCCCCCCCcCEEEecCCCCCCCChhhHHHh
Q 018490 87 NSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQIVLIGMKTLVQLSDLPQVDCLLITQSLDDHCHLKTLKPL 166 (355)
Q Consensus 87 ss~li~~~g~~iLiDP~~sg~~~~p~~~~~~g~~~r~~~~~~~~~g~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~l 166 (355)
+|++|+.++..+||||... .. ...+ +..+.. .+...+..+||+|++||.|.|| .+++..+
T Consensus 36 n~~li~~~~~~iLiD~g~~---~~-~~~~-------~~~l~~-------~~~~~~~~~i~~ii~TH~H~DH--~gg~~~l 95 (404)
T 2ohh_A 36 NAYLVCGDEGVALIDNSYP---GT-FDEL-------MARVED-------ALQQVGMERVDYIIQNHVEKDH--SGVLVEL 95 (404)
T ss_dssp CCEEEECSSCEEEECCCCT---TC-HHHH-------HHHHHH-------HHHHHTCCCCCEEECSCCSHHH--HTTHHHH
T ss_pred EEEEEEeCCcEEEEeCCCC---cc-HHHH-------HHHHHH-------HhccCCccCCCEEEeCCCCCcc--cchHHHH
Confidence 6899998888999999442 10 1111 011110 0000012378999999999999 5888888
Q ss_pred hhcCCCceEEEcCChHHHHhhcC-----CceEEcCCCceEEeCcccCCceEEEEEecC--ccCCCCCCCccEEEEEecCC
Q 018490 167 SKMSPNLKVIATPNAKTLLDPLF-----QNVTYVEPGQSSEIEGRNGSKLRVKATAGP--VLGPPWQRPENGYLVNSSQG 239 (355)
Q Consensus 167 ~~~~~~~~v~~~~~~~~~l~~~~-----~~v~~l~~~e~~~l~~~~~~~l~i~~~pa~--~~g~~~~~~~~g~~i~~~~~ 239 (355)
.+++|++++|+++.....+++.. .++..++.|+++.++ +.+++++++. |+. ...+|.++.
T Consensus 96 ~~~~p~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g-----~~~i~~~~~p~gH~~-----~~~~~~~~~--- 162 (404)
T 2ohh_A 96 HRRFPEAPIYCTEVAVKGLLKHYPSLREAEFMTVKTGDVLDLG-----GKTLTFLETPLLHWP-----DSMFTLLDE--- 162 (404)
T ss_dssp HHHSTTCCEEECHHHHHHHHHHCGGGGGSCEEECCTTCEEECS-----SCEEEEEECTTSSST-----TCEEEEEET---
T ss_pred HHHCCCCEEEECHHHHHHHHHHhcccccCCceEcCCCCEEEEC-----CEEEEEEeCCCCCCC-----CceEEEECC---
Confidence 88777899999988777666541 367889999999997 6666555443 321 124565542
Q ss_pred ceeEEEcCCCCCCcccccccCCcEEEEccc------cccCCC--ceeccCHHHHHHHHHHcCC----CEEEEeccCCcc
Q 018490 240 QLTLYYEPHCVYNQNFLEKERSDIIITPVI------KQLLPK--FTLVSGQEDAVKLAKLLHA----KFIVPMKNGDLD 306 (355)
Q Consensus 240 ~~~i~~sGDt~~~~~~~~~~~~Dl~~l~~g------~~~~~~--~~~h~~~~ea~~~~~~l~~----k~~ip~H~~~f~ 306 (355)
.+++|+||+.... ....+.++-- ++.+ ..|... ........++++.++.+.+ ++++|.|...+.
T Consensus 163 -~~~lf~GD~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~l~~l~~~~~~~~i~pgHg~~~~ 238 (404)
T 2ohh_A 163 -DGILFSNDAFGQH-LCCPQRLDRE-IPEYILMDAARKFYANLITPLSKLVLKKFDEVKELGLLERIQMIAPSHGQIWT 238 (404)
T ss_dssp -TTEEECTTTTCCC-CCCSCCBGGG-SCHHHHHHHHHHHHHHHTGGGHHHHHHHHHHHHHTTCGGGCSEEECSSSCBBS
T ss_pred -CcEEEecCccccC-cCcccccccc-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccEEecCCCcccc
Confidence 4799999987321 0000000000 0000 000000 0000112567788888898 899999976654
No 41
>2zwr_A Metallo-beta-lactamase superfamily protein; hydrolase; 2.20A {Thermus thermophilus} PDB: 2zzi_A
Probab=99.18 E-value=2.9e-11 Score=106.97 Aligned_cols=164 Identities=21% Similarity=0.210 Sum_probs=98.4
Q ss_pred EecCcEEEEEeCCeEEEEccccCCCCCCCcccccccCccccchhhhhhhccccCCCCCCCCCcCEEEecCCCCCCCChhh
Q 018490 83 YLEGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQIVLIGMKTLVQLSDLPQVDCLLITQSLDDHCHLKT 162 (355)
Q Consensus 83 wlGhss~li~~~g~~iLiDP~~sg~~~~p~~~~~~g~~~r~~~~~~~~~g~~~~~~~~~lp~iD~VlISH~H~DHld~~t 162 (355)
+++.+||+|+.++..+|||| |... ..+ ...+.. ..+ ++++|++||.|.||+ +.
T Consensus 10 ~~~~n~~li~~~~~~iliD~---G~~~---~~l-------~~~l~~-----------~g~-~i~~vilTH~H~DH~--gg 62 (207)
T 2zwr_A 10 PLQENAYLVETGEGPVLIDP---GDEP---EKL-------LALFQT-----------TGL-IPLAILLTHAHFDHV--GA 62 (207)
T ss_dssp TTTEEEEEEEETTEEEEECC---CSCH---HHH-------HHHHHH-----------HTC-CCSCEECSCCCGGGT--TT
T ss_pred CcccEEEEEEeCCcEEEEeC---CCCH---HHH-------HHHHHH-----------cCC-cccEEEECCCChHHH--cc
Confidence 35689999999999999999 4211 111 011110 011 489999999999995 67
Q ss_pred HHHhhhcCCCceEEEcCChHHHHhhc-------CC-------ceEEcCCCceEEeCcccCCceEEEEEecCccCCCCCCC
Q 018490 163 LKPLSKMSPNLKVIATPNAKTLLDPL-------FQ-------NVTYVEPGQSSEIEGRNGSKLRVKATAGPVLGPPWQRP 228 (355)
Q Consensus 163 l~~l~~~~~~~~v~~~~~~~~~l~~~-------~~-------~v~~l~~~e~~~l~~~~~~~l~i~~~pa~~~g~~~~~~ 228 (355)
+..+.+++ ++++|+++.....+++. +. ....++.++.+ . ++++..+|++.. .
T Consensus 63 ~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~i--~-----~~~~~~~pGHt~------g 128 (207)
T 2zwr_A 63 VAPLVEAL-DLPVYLHPLDLPLYEGADLAARAWGLAIPKPPLPVRPLEEGMRL--F-----GFQVLHLPGHSP------G 128 (207)
T ss_dssp HHHHHHHH-CCCEEECGGGHHHHHTHHHHHHHTTCCCCCCCSCCEECCTTCEE--T-----TEEEEECCSSST------T
T ss_pred HHHHHHHh-CCcEEECHHHHHHHhCchhhhhhcCCCCCcCCCCceEeCCCCEE--E-----EEEEEeCCCCCC------C
Confidence 77777654 78999999887765531 21 23445555432 2 477777776321 1
Q ss_pred ccEEEEEecCCceeEEEcCCCCCCcccccccCCcEEEEccccccCCCceeccCHHHHHHHHHHcCCC-EEEEeccCCc
Q 018490 229 ENGYLVNSSQGQLTLYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLAKLLHAK-FIVPMKNGDL 305 (355)
Q Consensus 229 ~~g~~i~~~~~~~~i~~sGDt~~~~~~~~~~~~Dl~~l~~g~~~~~~~~~h~~~~ea~~~~~~l~~k-~~ip~H~~~f 305 (355)
..+|.++ +.+++|+||+.+.... +..| .+..+. ....++++.+..+.++ .++|.|....
T Consensus 129 ~~~~~~~----~~~~lf~GD~~~~~~~---~~~~----------~~~~~~-~~~~~sl~~l~~l~~~~~i~pgHg~~~ 188 (207)
T 2zwr_A 129 HVAFYDP----EGAQVFSGDLLFRGSV---GRYD----------LPGADP-KALFASLKRLLSLPPETRVHPGHGPGT 188 (207)
T ss_dssp CEEEEET----TTTEEEEETSEETTEE---CCSS----------STTCCH-HHHHHHHHHHTTSCTTCEEEESBSCCE
T ss_pred cEEEEEC----CCCEEEEecccCCCCc---CCCC----------CCCCCH-HHHHHHHHHHhcCCCCCEEECCCCCCC
Confidence 2466664 3589999999765321 1111 111110 0123444555556676 6999997654
No 42
>1a7t_A Metallo-beta-lactamase; hydrolase (beta-lactamase), zinc; HET: MES; 1.85A {Bacteroides fragilis} SCOP: d.157.1.1 PDB: 1a8t_A* 2bmi_A 1kr3_A 1znb_A 2znb_A 3znb_A 4znb_A 1hlk_A*
Probab=99.18 E-value=4.9e-11 Score=107.41 Aligned_cols=171 Identities=9% Similarity=0.029 Sum_probs=106.8
Q ss_pred ecCcEEEEEeCCeEEEEccccCCCCCCCcccccccCccccchhhhhhhccccCCCCCCCCCcCEEEecCCCCCCCChhhH
Q 018490 84 LEGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQIVLIGMKTLVQLSDLPQVDCLLITQSLDDHCHLKTL 163 (355)
Q Consensus 84 lGhss~li~~~g~~iLiDP~~sg~~~~p~~~~~~g~~~r~~~~~~~~~g~~~~~~~~~lp~iD~VlISH~H~DHld~~tl 163 (355)
++.+|++|+.++..+||||..+. .. ...+ +..+.. .. ..+|++|++||.|.|| .+.+
T Consensus 35 ~~~n~~li~~~~~~iLiD~G~~~-~~--~~~~-------~~~l~~----------~~-~~~i~~ii~TH~H~DH--~gg~ 91 (232)
T 1a7t_A 35 VPSNGMIVINNHQAALLDTPIND-AQ--TEML-------VNWVTD----------SL-HAKVTTFIPNHWHGDC--IGGL 91 (232)
T ss_dssp EEEEEEEEEETTEEEEESCCSSH-HH--HHHH-------HHHHHH----------HH-CCEEEEEECSSSSHHH--HTTH
T ss_pred ccceEEEEEeCCEEEEEeCCCCH-HH--HHHH-------HHHHHH----------hc-CCCeEEEEeCCCCccc--cCCH
Confidence 44789999999999999993320 00 0001 011110 00 1278999999999999 5788
Q ss_pred HHhhhcCCCceEEEcCChHHHHhhcC--CceEEcCCCceEEeCcccCCceEEEEEe-cC-ccCCCCCCCccEEEEEecCC
Q 018490 164 KPLSKMSPNLKVIATPNAKTLLDPLF--QNVTYVEPGQSSEIEGRNGSKLRVKATA-GP-VLGPPWQRPENGYLVNSSQG 239 (355)
Q Consensus 164 ~~l~~~~~~~~v~~~~~~~~~l~~~~--~~v~~l~~~e~~~l~~~~~~~l~i~~~p-a~-~~g~~~~~~~~g~~i~~~~~ 239 (355)
..+.+ .++++|+++.....+++.+ .....++.++.+.++ +.++++++ +. |+. ...+|.++.
T Consensus 92 ~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g-----~~~i~~~~~~pgHt~-----g~~~~~~~~--- 156 (232)
T 1a7t_A 92 GYLQR--KGVQSYANQMTIDLAKEKGLPVPEHGFTDSLTVSLD-----GMPLQCYYLGGGHAT-----DNIVVWLPT--- 156 (232)
T ss_dssp HHHHH--TTCEEEEEHHHHHHHHHHTCCCCSEEESSEEEEEET-----TEEEEEECCCCSSST-----TCCEEEETT---
T ss_pred HHHHh--CCCeEEEcHHHHHHHHhcCCCCCceecCCCCEEEEC-----CeEEEEEeCCCCCCC-----CCEEEEECC---
Confidence 87776 3799999988877776543 235667778888887 67776663 32 321 124666532
Q ss_pred ceeEEEcCCCCCCcccccccCCcEEEEccccccCCCceeccCHHHHHHHHHHc--CCCEEEEeccCCcc
Q 018490 240 QLTLYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLAKLL--HAKFIVPMKNGDLD 306 (355)
Q Consensus 240 ~~~i~~sGDt~~~~~~~~~~~~Dl~~l~~g~~~~~~~~~h~~~~ea~~~~~~l--~~k~~ip~H~~~f~ 306 (355)
.+++|+||+.+.......+ ..+..+ .....++++.++.+ +++.++|.|...+.
T Consensus 157 -~~~lf~GD~~~~~~~~~~~------------~~~~~~-~~~~~~sl~~l~~~~~~~~~v~pgHg~~~~ 211 (232)
T 1a7t_A 157 -ENILFGGCMLKDNQTTSIG------------NISDAD-VTAWPKTLDKVKAKFPSARYVVPGHGNYGG 211 (232)
T ss_dssp -TTEEEEETTSCCTTCCSCC------------CCTTCC-TTTHHHHHHHHHHHCTTCSEEEESSSCCBC
T ss_pred -CCEEEEcCcccccCCcccc------------cCCCCC-HHHHHHHHHHHHhhCCCCCEEECCCCCccc
Confidence 4799999998742110100 001111 11356677777776 78999999987643
No 43
>1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A*
Probab=99.17 E-value=1.8e-10 Score=111.65 Aligned_cols=177 Identities=17% Similarity=0.159 Sum_probs=106.8
Q ss_pred CcEEEEEeCCeEEEEccccCCCCCCCcccccccCccccchhhhhhhccccCCCCCCCCCcCEEEecCCCCCCCChhhHHH
Q 018490 86 GNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQIVLIGMKTLVQLSDLPQVDCLLITQSLDDHCHLKTLKP 165 (355)
Q Consensus 86 hss~li~~~g~~iLiDP~~sg~~~~p~~~~~~g~~~r~~~~~~~~~g~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~ 165 (355)
.+|++|+. +..+||||..+ .. ...+ +..+. ..+ +..+||+|++||.|.|| .+++..
T Consensus 36 ~n~~li~~-~~~iliD~g~~---~~-~~~~-------~~~l~-------~~~---~~~~i~~iiiTH~H~DH--~gg~~~ 91 (398)
T 1ycg_A 36 YNAYLIVD-DKTALVDTVYE---PF-KEEL-------IAKLK-------QIK---DPVKLDYLVVNHTESDH--AGAFPA 91 (398)
T ss_dssp ECCEEECS-SSCEEECCCCG---GG-HHHH-------HHHHH-------HHC---SSCCCSEEEESCCSHHH--HTTHHH
T ss_pred EEEEEEEC-CCEEEEeCCCc---cc-HHHH-------HHHHH-------Hhc---CcccCCEEEeCCCCcch--hhhHHH
Confidence 47899984 57999999432 10 0111 11111 001 12479999999999999 588888
Q ss_pred hhhcCCCceEEEcCChHHHHhhc-C---CceEEcCCCceEEeCcccCCceEEEEEecC--ccCCCCCCCccEEEEEecCC
Q 018490 166 LSKMSPNLKVIATPNAKTLLDPL-F---QNVTYVEPGQSSEIEGRNGSKLRVKATAGP--VLGPPWQRPENGYLVNSSQG 239 (355)
Q Consensus 166 l~~~~~~~~v~~~~~~~~~l~~~-~---~~v~~l~~~e~~~l~~~~~~~l~i~~~pa~--~~g~~~~~~~~g~~i~~~~~ 239 (355)
|.+++|++++|+++.....+++. + .++..++.|+.+.++ +++++++++. |+. ...++.+ +
T Consensus 92 l~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~g-----~~~~~~~~~p~gH~~-----~~~~~~~--~-- 157 (398)
T 1ycg_A 92 IMELCPDAHVLCTQRAFDSLKAHYSHIDFNYTIVKTGTSVSLG-----KRSLTFIEAPMLHWP-----DSMFTYV--P-- 157 (398)
T ss_dssp HHHHCTTCEEEECHHHHHHHHHHTCSCCCEEEECCTTCEEECS-----SCEEEEEECTTSSST-----TCEEEEE--T--
T ss_pred HHHHCCCCEEEEcHHHHHHHHHHhCCCCcceEEeCCCCEEeeC-----CcEEEEEeCCCCCCC-----CcEEEEE--C--
Confidence 88877789999998887777654 2 357789999999997 6666665443 321 1234433 3
Q ss_pred ceeEEEcCCCCCCcccccccCCcEEEEcc----c------cccCCC--ceeccCHHHHHHHHHH--cCCCEEEEeccCCc
Q 018490 240 QLTLYYEPHCVYNQNFLEKERSDIIITPV----I------KQLLPK--FTLVSGQEDAVKLAKL--LHAKFIVPMKNGDL 305 (355)
Q Consensus 240 ~~~i~~sGDt~~~~~~~~~~~~Dl~~l~~----g------~~~~~~--~~~h~~~~ea~~~~~~--l~~k~~ip~H~~~f 305 (355)
+.+++|+||+... .. ..+- +++. . ..|+.. ........++++.++. +++++++|.|...+
T Consensus 158 ~~~~lf~GD~~~~-~~----~~~~-~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~l~~l~~~~l~~~~i~p~Hg~~~ 231 (398)
T 1ycg_A 158 EEALLLPNDAFGQ-HI----ATSV-RFDDQVDAGLIMDEAAKYYANILMPFSNLITKKLDEIQKINLAIKTIAPSHGIIW 231 (398)
T ss_dssp TTTEEEEETTTCC-CC----CCSC-CBGGGSCHHHHHHHHHHHHHHHTGGGHHHHHHHHHHHHHTTCCCSEEEESSSCBB
T ss_pred CCcEEEecccccc-cc----Cccc-cccccccHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhhCCCCccEEECCCchhh
Confidence 3589999999432 11 0110 0000 0 000000 0000012567777888 89999999997654
Q ss_pred c
Q 018490 306 D 306 (355)
Q Consensus 306 ~ 306 (355)
.
T Consensus 232 ~ 232 (398)
T 1ycg_A 232 R 232 (398)
T ss_dssp C
T ss_pred h
Confidence 3
No 44
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*
Probab=99.17 E-value=1.8e-10 Score=112.90 Aligned_cols=181 Identities=17% Similarity=0.232 Sum_probs=106.2
Q ss_pred cEEEEEeCCeEEEEccccCCCCCCCcccccccCccccchhhhhhhccccCCCCCCCCCcCEEEecCCCCCCCChhhHHHh
Q 018490 87 NSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQIVLIGMKTLVQLSDLPQVDCLLITQSLDDHCHLKTLKPL 166 (355)
Q Consensus 87 ss~li~~~g~~iLiDP~~sg~~~~p~~~~~~g~~~r~~~~~~~~~g~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~l 166 (355)
|||||+.+++.+||||+ ...+ .+-+ +..+. ..+ +..+||+|++||.|.|| .+++..|
T Consensus 53 NsYLI~~~~~~vLIDtg---~~~~-~~~~-------l~~l~-------~~i---~~~~IdyIi~TH~h~DH--~G~l~~l 109 (410)
T 4dik_A 53 NAYLVKLNGANVLIDGW---KGNY-AKEF-------IDALS-------KIV---DPKEITHIIVNHTEPDA--SGSLPAT 109 (410)
T ss_dssp EEEEEECSSCEEEECCC---CGGG-HHHH-------HHHHT-------TTS---CGGGCCEEECSCCCHHH--HTTHHHH
T ss_pred EEEEEEECCeEEEEeCC---Ccch-HHHH-------HHHHH-------Hhc---CcccCCEEEeCcCCcch--hhhHHHH
Confidence 79999999999999994 2221 0111 11111 112 22379999999999999 5888888
Q ss_pred hhcC-CCceEEEcCChHHHHhhcC--CceEEcCCCceEEeCcccCCceEEEEEecCccCCCCCCCccEEEEEecCCceeE
Q 018490 167 SKMS-PNLKVIATPNAKTLLDPLF--QNVTYVEPGQSSEIEGRNGSKLRVKATAGPVLGPPWQRPENGYLVNSSQGQLTL 243 (355)
Q Consensus 167 ~~~~-~~~~v~~~~~~~~~l~~~~--~~v~~l~~~e~~~l~~~~~~~l~i~~~pa~~~g~~~~~~~~g~~i~~~~~~~~i 243 (355)
.++. |++++++++.....++... .++..++.|++++++ +..+++..+|+.|+. .+.++-.+ ++
T Consensus 110 ~~~~~~~~~v~~s~~~~~~l~~~~~~~~~~~v~dGd~l~lG---~~~L~~i~tPg~H~p-------~~~~~y~~----~i 175 (410)
T 4dik_A 110 LKTIGHDVEIIASNFGKRLLEGFYGIKDVTVVKDGEEREIG---GKKFKFVMTPWLHWP-------DTMVTYLD----GI 175 (410)
T ss_dssp HHHHCSCCEEEECHHHHHHHHHHHCCCCEEECCTTCEEEET---TEEEEEEECTTSSST-------TCEEEEET----TE
T ss_pred HHHcCCCCEEEeCHHHHHHHHhhcCccceeEecCCCEEeec---ceEEEEecCCCCCCC-------CCeeEEeC----Cc
Confidence 7654 6899999988887777652 568889999999998 223444555554542 12222223 58
Q ss_pred EEcCCCCCCccccccc--CCcEEEEc----cccccCCCceec--cCHHHHHHHHHHcCCCEEEEeccCCc
Q 018490 244 YYEPHCVYNQNFLEKE--RSDIIITP----VIKQLLPKFTLV--SGQEDAVKLAKLLHAKFIVPMKNGDL 305 (355)
Q Consensus 244 ~~sGDt~~~~~~~~~~--~~Dl~~l~----~g~~~~~~~~~h--~~~~ea~~~~~~l~~k~~ip~H~~~f 305 (355)
+|+||..-. +..... ..+....+ -...|....-+. .....+++.++.|..+.++|.|-.-+
T Consensus 176 LFsgD~fg~-h~~~~~~~d~~~~~~e~~~~~~~~yy~~i~~p~~~~v~~~L~kl~~Ldi~~I~P~HGpi~ 244 (410)
T 4dik_A 176 LFSCDVGGG-YLLPEILDDSNESVVERYLPHVTKYIVTVIGHYKNYILEGAEKLSSLKIKALLPGHGLIW 244 (410)
T ss_dssp EEEETTTCC-SSCCSSSBTTCHHHHHHHHHHHHHHHHHHHGGGHHHHHHHHHHHHTSCCSEEEESSSCBB
T ss_pred eEccccccc-cccCccccccchhhHHHHHHHHHHHHHhhccchHHHHHHHHHHHhCCCCCEEecCCcchh
Confidence 999997421 111100 00000000 000000000000 01256777788889999999996543
No 45
>3dha_A N-acyl homoserine lactone hydrolase; zinc bimetallohydrolase, quorum quenching; HET: C6L GOL; 0.95A {Bacillus thuringiensis serovar kurstakorganism_taxid} PDB: 3dhb_A* 3dhc_A* 2a7m_A* 2br6_A 2btn_A
Probab=99.16 E-value=1.1e-10 Score=106.35 Aligned_cols=146 Identities=12% Similarity=0.074 Sum_probs=87.2
Q ss_pred EEEecCcEEEEEeCCeEEEEccccCCCCC-CCccccc---cc-------Ccccc-chhhhhhhccccCCCCCCCCCcCEE
Q 018490 81 LTYLEGNSWLWDLDGVKVLVDPILVGNLD-FGIPWLF---DA-------GKKFL-KSFQIVLIGMKTLVQLSDLPQVDCL 148 (355)
Q Consensus 81 itwlGhss~li~~~g~~iLiDP~~sg~~~-~p~~~~~---~g-------~~~r~-~~~~~~~~g~~~~~~~~~lp~iD~V 148 (355)
...++.+|+||+.++..||||+..+.... -+..|-. .+ ..+.+ ..+. . ..+++ .+||+|
T Consensus 34 ~~~~~~~~~lI~~~~~~iLiDtG~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~l~--~----~g~~~---~~I~~V 104 (254)
T 3dha_A 34 LLNLPVWCYLLETEEGPILVDTGMPESAVNNEGLFNGTFVEGQILPKMTEEDRIVNILK--R----VGYEP---DDLLYI 104 (254)
T ss_dssp EEEEEEEEEEEEETTEEEEECCCCCGGGBTCTTTTTTSTTTTTEEEEBCGGGSHHHHHH--H----HTCCG---GGCSEE
T ss_pred eEEEeeEEEEEECCCccEEEECCCChhhhcccccccccccccccccccCchhhHHHHHH--H----cCCCH---HHCCEE
Confidence 44567789999999999999995531100 0000000 00 00001 0111 0 01112 258999
Q ss_pred EecCCCCCCCChhhHHHhhhcCCCceEEEcCChHHHHhhc-------C---CceEEcCCCceEEeCcccCCceEEEEEec
Q 018490 149 LITQSLDDHCHLKTLKPLSKMSPNLKVIATPNAKTLLDPL-------F---QNVTYVEPGQSSEIEGRNGSKLRVKATAG 218 (355)
Q Consensus 149 lISH~H~DHld~~tl~~l~~~~~~~~v~~~~~~~~~l~~~-------~---~~v~~l~~~e~~~l~~~~~~~l~i~~~pa 218 (355)
++||.|.|| .+.+..+. ++++|+++...+.+... . .++...+ ++...++ ++++..+|+
T Consensus 105 ilTH~H~DH--~gg~~~~~----~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-----~i~~~~~pG 172 (254)
T 3dha_A 105 ISSHLHFDH--AGGNGAFT----NTPIIVQRTEYEAALHREEYMKECILPHLNYKIIE-GDYEVVP-----GVQLLYTPG 172 (254)
T ss_dssp ECSCCSHHH--HTTGGGCS----SSCEEEEHHHHHHHHHCTTSCGGGSCTTSCEEEEC-SSEEEET-----TEEEEECCS
T ss_pred EcCCChhhc--CCChHHCC----CCEEEECHHHHHHhhccccccccccCcccceEEec-CCccccC-----CEEEEECCC
Confidence 999999999 57776665 68999998877654321 0 1233333 5555555 788887776
Q ss_pred CccCCCCCCCccEEEEEecCCceeEEEcCCCCCCcc
Q 018490 219 PVLGPPWQRPENGYLVNSSQGQLTLYYEPHCVYNQN 254 (355)
Q Consensus 219 ~~~g~~~~~~~~g~~i~~~~~~~~i~~sGDt~~~~~ 254 (355)
+.. ...+++++.++ +.+++|+||+.+...
T Consensus 173 Ht~------g~~~~~~~~~~-~~~vl~~GD~~~~~~ 201 (254)
T 3dha_A 173 HSP------GHQSLFIETEQ-SGSVLLTIDASYTKE 201 (254)
T ss_dssp SST------TCEEEEEEETT-TEEEEEEETTCSSHH
T ss_pred CCC------CCEEEEEEeCC-CCEEEEEecccchhh
Confidence 421 13688887753 468999999998754
No 46
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}
Probab=99.15 E-value=1.1e-10 Score=114.03 Aligned_cols=180 Identities=15% Similarity=0.189 Sum_probs=105.8
Q ss_pred CcEEEEEeCCeEEEEccccCCCCCCCcccccccCccccchhhhhhhccccCCCCCCCCCcCEEEecCCCCCCCChhhHHH
Q 018490 86 GNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQIVLIGMKTLVQLSDLPQVDCLLITQSLDDHCHLKTLKP 165 (355)
Q Consensus 86 hss~li~~~g~~iLiDP~~sg~~~~p~~~~~~g~~~r~~~~~~~~~g~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~ 165 (355)
.+|++|+. +..+||||.. ... ...+ +..+. ..+ +..+||+|++||.|.||+ +++..
T Consensus 41 ~n~~li~~-~~~iLID~G~---~~~-~~~~-------~~~l~-------~~~---~~~~i~~ii~TH~H~DH~--gg~~~ 96 (414)
T 2q9u_A 41 YNSYFIDD-ECPTVIDSVK---YPF-AEEW-------LSRIA-------ACC---PLDKIKYVVMNHAEGDHA--SSLKD 96 (414)
T ss_dssp ECCEEECS-SSCEEECCCC---GGG-HHHH-------HHHHH-------HHS---CGGGCCEEECSCCSGGGT--TTHHH
T ss_pred eeEEEEEC-CCEEEEeCCC---ccc-HHHH-------HHHHH-------Hhc---CcccCCEEEeCCCCcchh--cCHHH
Confidence 57899984 7899999943 110 0111 01111 011 123789999999999995 78888
Q ss_pred hhhcCCCceEEEcCChHHHHhhc-C---CceEEcCCCceEEeCcccCCceEEEEEecC--ccCCCCCCCccEEEEEecCC
Q 018490 166 LSKMSPNLKVIATPNAKTLLDPL-F---QNVTYVEPGQSSEIEGRNGSKLRVKATAGP--VLGPPWQRPENGYLVNSSQG 239 (355)
Q Consensus 166 l~~~~~~~~v~~~~~~~~~l~~~-~---~~v~~l~~~e~~~l~~~~~~~l~i~~~pa~--~~g~~~~~~~~g~~i~~~~~ 239 (355)
|.+++|++++|+++.....++.. + .++..++.++++.++ +.+++++++. |+ ..++++..+
T Consensus 97 l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~lg-----~~~~~~~~~p~gHt-------~~~~~~~~~-- 162 (414)
T 2q9u_A 97 HYHKFTNATFVCTKKCQEHLKILYGMEKATWLIVDDKYTLKIG-----KRTLKFIPVPLLHW-------PDSTFTYCP-- 162 (414)
T ss_dssp HGGGSTTCEEEECHHHHHHHHHHHCCTTCCEEECCTTCCEECS-----SCEEEEEECTTSSS-------TTCEEEEET--
T ss_pred HHHHCCCCEEEECHHHHHHHHHHhCCCCCeeEEeCCCCEEEEC-----CeEEEEEeCCCCCC-------CCceEEEEC--
Confidence 88877789999998887766543 2 357788899999997 5555554432 32 122333333
Q ss_pred ceeEEEcCCCCCCccccccc----CCc--EEEEcccccc---CCCceeccCHHHHHHHHHHcCCCEEEEeccCCcc
Q 018490 240 QLTLYYEPHCVYNQNFLEKE----RSD--IIITPVIKQL---LPKFTLVSGQEDAVKLAKLLHAKFIVPMKNGDLD 306 (355)
Q Consensus 240 ~~~i~~sGDt~~~~~~~~~~----~~D--l~~l~~g~~~---~~~~~~h~~~~ea~~~~~~l~~k~~ip~H~~~f~ 306 (355)
+.+++|+||.... ...... ..+ ..+.+...++ ...+. ....++++.++.+++++++|.|...+.
T Consensus 163 ~~~~lf~GD~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~sl~~l~~l~~~~i~pgHg~~~~ 235 (414)
T 2q9u_A 163 EDKILFSNDGFGQ-HYATSRRWADECDVSHVMHLFKEYTANILGLFS--AQMRKALEVASTVEIKYILSAHGVSWR 235 (414)
T ss_dssp TTTEEEEETTTCC-CCCCSCCBGGGSCHHHHHHHHHHHHHHHTTTCH--HHHHHHHHHHHTSCCSEEEESSSCBEE
T ss_pred CCeEEEEcccccc-ccCcccccccccchhhHHHHHHHHHHHheehHH--HHHHHHHHHHhCCCCCEEECCCcCeec
Confidence 3589999996532 110000 000 0000000000 00000 013577788888899999999987653
No 47
>2zo4_A Metallo-beta-lactamase family protein; hydrolase; 2.10A {Thermus thermophilus}
Probab=99.14 E-value=2.2e-10 Score=107.68 Aligned_cols=176 Identities=14% Similarity=0.063 Sum_probs=103.8
Q ss_pred cCcEEEEEeCCeEEEEccccCCCCCCCcccccccCccccchhhhhhhccccCCCCCCCCCcCEEEecCCCCCCCChhhHH
Q 018490 85 EGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQIVLIGMKTLVQLSDLPQVDCLLITQSLDDHCHLKTLK 164 (355)
Q Consensus 85 Ghss~li~~~g~~iLiDP~~sg~~~~p~~~~~~g~~~r~~~~~~~~~g~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~ 164 (355)
+.+|++|+.++..+||||..+.... ...+ .+.++. ..++. .+|++|++||.|.|| .+.+.
T Consensus 21 ~~n~~li~~~~~~ilID~G~~~~~~--~~~l----~~~l~~---------~g~~~---~~i~~Vi~TH~H~DH--~gg~~ 80 (317)
T 2zo4_A 21 TVNLYLLQGAGEVALVDTALGTRAA--RGAL----ELHLAE---------LGLCF---QDVKTILLTHHHPDH--YGLSG 80 (317)
T ss_dssp EEEEEEEEETTEEEEECCCCSSHHH--HHHH----HHHHHH---------TTCCG---GGCCEEEESCCSHHH--HTTHH
T ss_pred cEEEEEEEcCCceEEEECCCCCHHH--HHHH----HHHHHH---------cCCCh---hhcCEEEEcCCCCcc--cccHH
Confidence 4679999998899999994321000 0000 000111 01111 268999999999999 57888
Q ss_pred HhhhcCCCceEEEcCChHHHHhh------------------cC-----------------------CceEEcCCCceEEe
Q 018490 165 PLSKMSPNLKVIATPNAKTLLDP------------------LF-----------------------QNVTYVEPGQSSEI 203 (355)
Q Consensus 165 ~l~~~~~~~~v~~~~~~~~~l~~------------------~~-----------------------~~v~~l~~~e~~~l 203 (355)
.+.++ ++++|+++.....++. ++ .....++.|+.+.+
T Consensus 81 ~l~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~ 158 (317)
T 2zo4_A 81 FFEGL--GARVFLHEEEFARGHRFWREPEAFAEASWRLFLDHGTPEGALQGIRETVEKTRERVHPPQNPLPLRDGEALEV 158 (317)
T ss_dssp HHHHT--TCEEEEEGGGTTTHHHHHHCTTTSHHHHHHHHHHTTCCC-------CHHHHHHTTCCCCSSCEEECTTCEEEE
T ss_pred HHHhC--CCEEEEcHHHHHHHHhhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHhcccccccCCCCCCceEECCCCEEEe
Confidence 88765 7899998876543321 11 13567888888998
Q ss_pred CcccCCceEEEEEecC-ccCCCCCCCccEEEEEecCCceeEEEcCCCCCCcccccccCCcEEEEccccccCCCceeccCH
Q 018490 204 EGRNGSKLRVKATAGP-VLGPPWQRPENGYLVNSSQGQLTLYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQ 282 (355)
Q Consensus 204 ~~~~~~~l~i~~~pa~-~~g~~~~~~~~g~~i~~~~~~~~i~~sGDt~~~~~~~~~~~~Dl~~l~~g~~~~~~~~~h~~~ 282 (355)
+ +.+++++++. |+. ...+|.+ + +.+++|+||+.+....... ...+. . . ..++ ...
T Consensus 159 g-----g~~~~~i~tpGHt~-----g~~~~~~--~--~~~~lf~GD~~~~~~~~~~-----~~~~~-~--~-~~~~-~~~ 214 (317)
T 2zo4_A 159 A-----GKRLRVLWTPGHAD-----GHAAFYL--E--EEGVLLAGDALLEKVSPNV-----GLWAY-T--R-ENPL-KDF 214 (317)
T ss_dssp T-----TEEEEEEECCSSST-----TCEEEEE--T--TTTEEEEETSCCSSSCCCC-----CCCTT-S--C-SCHH-HHH
T ss_pred C-----CceEEEEECCCCCc-----ccEEEEe--C--CCCEEEECCEecCCCCCCC-----cccCC-C--C-CchH-HHH
Confidence 7 5555554332 321 1345554 3 3589999999875321110 00010 0 0 0010 123
Q ss_pred HHHHHHHHHcCCCEEEEeccCCcc
Q 018490 283 EDAVKLAKLLHAKFIVPMKNGDLD 306 (355)
Q Consensus 283 ~ea~~~~~~l~~k~~ip~H~~~f~ 306 (355)
.++++.++.++++.++|.|...+.
T Consensus 215 ~~sl~~l~~l~~~~v~pgHg~~~~ 238 (317)
T 2zo4_A 215 LRSLDRLADLGARVAYAGHFGPIA 238 (317)
T ss_dssp HHHHHHHHTSCCSEEEESSSSCBS
T ss_pred HHHHHHHhcCCCCEEECCCCCccC
Confidence 566677778899999999988664
No 48
>2vw8_A PA1000, PQSE; quinolone signal response protein, signaling protein, SSPF; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 2q0j_A 2q0i_A 3dh8_A*
Probab=99.12 E-value=5e-10 Score=104.80 Aligned_cols=174 Identities=17% Similarity=0.152 Sum_probs=103.4
Q ss_pred cCcEEEEE-eCCeEEEEccccCCCCCCCcccccccCccccchhhhhhhccccCCCCCCCCCcCEEEecCCCCCCCChhhH
Q 018490 85 EGNSWLWD-LDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQIVLIGMKTLVQLSDLPQVDCLLITQSLDDHCHLKTL 163 (355)
Q Consensus 85 Ghss~li~-~~g~~iLiDP~~sg~~~~p~~~~~~g~~~r~~~~~~~~~g~~~~~~~~~lp~iD~VlISH~H~DHld~~tl 163 (355)
+.+|++|+ .++..+||||..+. . .+-+ ...+. .. +++..+|++|++||.|.||+ +.+
T Consensus 23 ~~n~~li~~~~~~~iLID~G~~~--~--~~~~-------~~~l~-------~~--~~~~~~i~~Ii~TH~H~DH~--gg~ 80 (303)
T 2vw8_A 23 QVPVFLLRLGEASWALVEGGISR--D--AELV-------WADLC-------RW--VADPSQVHYWLITHKHYDHC--GLL 80 (303)
T ss_dssp TSCEEEEEEETTEEEEECCCCGG--G--HHHH-------HHHHH-------HH--CSCGGGEEEEECCCCSTTTT--TTH
T ss_pred CceEEEEEeCCCceEEEECCCCC--c--HHHH-------HHHHH-------HH--hcCcccceEEEeccCCcccc--CCH
Confidence 47899994 78999999993321 0 0000 01111 01 11223789999999999995 788
Q ss_pred HHhhhcCCCceEEEcCChHHHHhh-----------------cC----------CceEEcCCCceEEeCcccCCceEE--E
Q 018490 164 KPLSKMSPNLKVIATPNAKTLLDP-----------------LF----------QNVTYVEPGQSSEIEGRNGSKLRV--K 214 (355)
Q Consensus 164 ~~l~~~~~~~~v~~~~~~~~~l~~-----------------~~----------~~v~~l~~~e~~~l~~~~~~~l~i--~ 214 (355)
..+.+++|++++|+++.....+++ |+ ..+..++.|+.++++ +++++ .
T Consensus 81 ~~l~~~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~lg----~g~~l~~i 156 (303)
T 2vw8_A 81 PYLCPRLPNVQVLASERTCQAWKSESAVRVVERLNRQLLRAEQRLPEACAWDALPVRAVADGEWLELG----PRHRLQVI 156 (303)
T ss_dssp HHHGGGCTTCEEEEEHHHHHHTTCHHHHHHHHHHHHHTCCTTCCCCCCCCGGGSCEEEECTTCEEEEE----TTEEEEEE
T ss_pred HHHHHhCCCCeEEECHHHHHHHhccchhhHHHHHHHHHHHhhcccccccCCCCCCceEcCCCCEEecC----CCeEEEEE
Confidence 888887778999998876543321 11 234677888888887 12555 4
Q ss_pred EEecCccCCCCCCCccEEEEEecCCceeEEEcCCCCCCcccccccCCcEEEEccccccCCCceeccCHHHHHHHHHHcCC
Q 018490 215 ATAGPVLGPPWQRPENGYLVNSSQGQLTLYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLAKLLHA 294 (355)
Q Consensus 215 ~~pa~~~g~~~~~~~~g~~i~~~~~~~~i~~sGDt~~~~~~~~~~~~Dl~~l~~g~~~~~~~~~h~~~~ea~~~~~~l~~ 294 (355)
.+|+ |+. ...+|.++ +.+++|+||+.+.... .. .. . .+ . . ..+. ....++++.+..+++
T Consensus 157 ~~pG-Ht~-----g~~~~~~~----~~~~lf~GD~~~~~~~-~~-~~--~-~~--~-~--~~d~-~~~~~sl~~l~~l~~ 215 (303)
T 2vw8_A 157 EAHG-HSD-----DHVVFYDV----RRRRLFCGDALGEFDE-AE-GV--W-RP--L-V--FDDM-EAYLESLERLQRLPT 215 (303)
T ss_dssp ECTT-SST-----TCEEEEET----TTTEEEEETTTCEECT-TT-CS--E-EC--C-C--SSCH-HHHHHHHHHHHTSSC
T ss_pred ECCC-CCc-----ccEEEEEC----CCCEEEEcCccCcccC-cc-cc--c-CC--C-C--CCCH-HHHHHHHHHHhcCCC
Confidence 4554 321 13466664 2489999999642111 00 00 0 00 0 0 0000 013455666677889
Q ss_pred C-EEEEeccCCc
Q 018490 295 K-FIVPMKNGDL 305 (355)
Q Consensus 295 k-~~ip~H~~~f 305 (355)
+ +++|.|....
T Consensus 216 ~~~v~pgHg~~~ 227 (303)
T 2vw8_A 216 LLQLIPGHGGLL 227 (303)
T ss_dssp CSEEEESSSCEE
T ss_pred CeEEECCCCCcc
Confidence 9 9999998765
No 49
>2gcu_A Putative hydroxyacylglutathione hydrolase 3; ethylmalonic encephalopathy, ETHE1, structural genomics, protein structure initiative; 1.48A {Arabidopsis thaliana}
Probab=99.11 E-value=6.8e-10 Score=101.25 Aligned_cols=161 Identities=17% Similarity=0.213 Sum_probs=99.5
Q ss_pred cCcEEEEEeC----CeEEEEccccCCCCCCCcccccccCccccchhhhhhhccccCCCCCCCCCcCEEEecCCCCCCCCh
Q 018490 85 EGNSWLWDLD----GVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQIVLIGMKTLVQLSDLPQVDCLLITQSLDDHCHL 160 (355)
Q Consensus 85 Ghss~li~~~----g~~iLiDP~~sg~~~~p~~~~~~g~~~r~~~~~~~~~g~~~~~~~~~lp~iD~VlISH~H~DHld~ 160 (355)
+++||||+.+ +..+||||..+ . ...+ +..+. ...+ ++++||+||.|.||+
T Consensus 14 ~~~~yli~~~~~~~~~~ilID~g~~---~--~~~~-------~~~l~-----------~~g~-~i~~Il~TH~H~DH~-- 67 (245)
T 2gcu_A 14 STFTYLLADVSHPDKPALLIDPVDK---T--VDRD-------LKLID-----------ELGL-KLIYAMNTHVHADHV-- 67 (245)
T ss_dssp TEEEEEEEETTSTTCEEEEESCBGG---G--HHHH-------HHHHH-----------HHTC-EEEEEECSSCCSSSC--
T ss_pred ceEEEEEEcCCCCCCcEEEEeCCCc---h--HHHH-------HHHHH-----------HCCC-eeeEEEeCCCChhhh--
Confidence 6889999984 78999999542 1 0011 01111 0112 589999999999995
Q ss_pred hhHHHhhhcCCCceEEEcCChHHHHhhcCCceEEcCCCceEEeCcccCCceEEEEEecC-ccCCCCCCCccEEEEEecC-
Q 018490 161 KTLKPLSKMSPNLKVIATPNAKTLLDPLFQNVTYVEPGQSSEIEGRNGSKLRVKATAGP-VLGPPWQRPENGYLVNSSQ- 238 (355)
Q Consensus 161 ~tl~~l~~~~~~~~v~~~~~~~~~l~~~~~~v~~l~~~e~~~l~~~~~~~l~i~~~pa~-~~g~~~~~~~~g~~i~~~~- 238 (355)
+++..|.+.++++++|++..... .....+..|+.+.++ +++|++++.. |+. ...+|+++..+
T Consensus 68 gg~~~l~~~~~~~~v~~~~~~~~------~~~~~~~~g~~~~~g-----~~~i~v~~tpGHt~-----g~~~~~~~~~~~ 131 (245)
T 2gcu_A 68 TGTGLLKTKLPGVKSVISKASGS------KADLFLEPGDKVSIG-----DIYLEVRATPGHTA-----GCVTYVTGEGAD 131 (245)
T ss_dssp BSHHHHHHHSTTCEEEEEGGGCC------CCSEEECTTCEEEET-----TEEEEEEECCSSST-----TCEEEEECCSTT
T ss_pred hhHHHHHHhCCCCeEEecccccc------cCCEEcCCCCEEEEC-----CEEEEEEECCCCCC-----CCEEEEECCccc
Confidence 78888877446899999865421 234567888999997 6666655432 221 23577776531
Q ss_pred -CceeEEEcCCCCCCcccccccCCcEEEEccccccCCCceeccCHHHHHHH----HHHcCCC-EEEEeccCC
Q 018490 239 -GQLTLYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKL----AKLLHAK-FIVPMKNGD 304 (355)
Q Consensus 239 -~~~~i~~sGDt~~~~~~~~~~~~Dl~~l~~g~~~~~~~~~h~~~~ea~~~----~~~l~~k-~~ip~H~~~ 304 (355)
++.+++|+||+.+.... +.+|+ + . -++++..+. +..+.++ .++|.|...
T Consensus 132 ~~~~~~lftGD~~~~~~~---~~~d~---~-------~----~~~~~~~~sl~~~l~~l~~~~~v~pgHg~~ 186 (245)
T 2gcu_A 132 QPQPRMAFTGDAVLIRGC---GRTDF---Q-------E----GSSDQLYESVHSQIFTLPKDTLIYPAHDYK 186 (245)
T ss_dssp SCSSCEEEEETTSBTTBC---CCCSS---T-------T----CCHHHHHHHHHHHTTTSCTTCEEEESBCSS
T ss_pred cccccEEEECCccccCCc---cCCCC---C-------C----CCHHHHHHHHHHHHHhCCCCEEEECCCCCC
Confidence 02489999999875321 12221 0 0 134444443 3446676 799999764
No 50
>1mqo_A Beta-lactamase II; alpha-beta/BETA-alpha fold, hydrolase; HET: CIT; 1.35A {Bacillus cereus} SCOP: d.157.1.1 PDB: 1bc2_A 1bvt_A* 3i0v_A 3i11_A 3i13_A 3i14_A 3i15_A 2uyx_A 2bc2_A 3bc2_A 2bfl_A 2bfk_A 2bfz_B 2bg2_A 2bg7_A 2bg8_A 1dxk_A 3kns_A 3knr_A 2bfz_A ...
Probab=99.11 E-value=7.1e-11 Score=105.90 Aligned_cols=170 Identities=14% Similarity=0.075 Sum_probs=104.0
Q ss_pred ecCcEEEEEeCCeEEEEccccCCCCCCCcccccccCccccchhhhhhhccccCCCCCCCCCcCEEEecCCCCCCCChhhH
Q 018490 84 LEGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQIVLIGMKTLVQLSDLPQVDCLLITQSLDDHCHLKTL 163 (355)
Q Consensus 84 lGhss~li~~~g~~iLiDP~~sg~~~~p~~~~~~g~~~r~~~~~~~~~g~~~~~~~~~lp~iD~VlISH~H~DHld~~tl 163 (355)
++.+|++|+.++..+|||| |... ... .+.+..+.. . ...++++|++||.|.|| .+.+
T Consensus 39 ~~~n~~li~~~~~~iliD~---G~~~---~~~----~~~~~~l~~----------~-~~~~i~~ii~TH~H~DH--~gg~ 95 (227)
T 1mqo_A 39 VPSNGLVLNTSKGLVLVDS---SWDD---KLT----KELIEMVEK----------K-FQKRVTDVIITHAHADR--IGGI 95 (227)
T ss_dssp EEEEEEEEEETTEEEEESC---CSSH---HHH----HHHHHHHHH----------H-HTSCEEEEECCCCSHHH--HTTH
T ss_pred ecceEEEEEeCCeEEEEEC---CCCh---HHH----HHHHHHHHH----------h-cCCCceEEEeCCCCchh--ccch
Confidence 4578999999999999999 4211 000 000111110 0 01378999999999999 5788
Q ss_pred HHhhhcCCCceEEEcCChHHHHhhcC--CceEEcCCCceEEeCcccCCceEEEEE-ecC-ccCCCCCCCccEEEEEecCC
Q 018490 164 KPLSKMSPNLKVIATPNAKTLLDPLF--QNVTYVEPGQSSEIEGRNGSKLRVKAT-AGP-VLGPPWQRPENGYLVNSSQG 239 (355)
Q Consensus 164 ~~l~~~~~~~~v~~~~~~~~~l~~~~--~~v~~l~~~e~~~l~~~~~~~l~i~~~-pa~-~~g~~~~~~~~g~~i~~~~~ 239 (355)
..+.++ ++++|+++.....++..+ ..+..+..++.+.++ +++|+++ ++. |+. ...+|.++
T Consensus 96 ~~l~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-----~~~i~~~~~~pgHt~-----g~~~~~~~---- 159 (227)
T 1mqo_A 96 KTLKER--GIKAHSTALTAELAKKNGYEEPLGDLQTVTNLKFG-----NMKVETFYPGKGHTE-----DNIVVWLP---- 159 (227)
T ss_dssp HHHHHH--TCEEECBHHHHHHHHHTTCCCCCCCBCSEEEEEET-----TEEEEEECCCCSSSS-----SCCEEEET----
T ss_pred HHHhhC--CcEEEeccchHHHHHhcCCCCCccccCCCCeeeEC-----CEEEEEEecCCCCCC-----CCEEEEEC----
Confidence 888765 689998887777666554 244566777788887 7777764 222 221 13466663
Q ss_pred ceeEEEcCCCCCCcccccccCCcEEEEccccccCCCceeccCHHHHHHHHHHc--CCCEEEEeccCCc
Q 018490 240 QLTLYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLAKLL--HAKFIVPMKNGDL 305 (355)
Q Consensus 240 ~~~i~~sGDt~~~~~~~~~~~~Dl~~l~~g~~~~~~~~~h~~~~ea~~~~~~l--~~k~~ip~H~~~f 305 (355)
+.+++|+||+.+....... +. .+... .....++++.++.+ +++.++|.|...+
T Consensus 160 ~~~~lf~GD~~~~~~~~~~----------~~--~~~~~-~~~~~~sl~~l~~~~~~~~~i~pgHg~~~ 214 (227)
T 1mqo_A 160 QYNILVGGCLVKSTSAKDL----------GN--VADAY-VNEWSTSIENVLKRYRNINAVVPGHGEVG 214 (227)
T ss_dssp TTTEEEEETTSCCTTCCSC----------CC--CTTCC-HHHHHHHHHHHHHHCCSCSEEEESSSCCB
T ss_pred CCCEEEEeeeeeccCcccc----------Cc--CCCCC-HHHHHHHHHHHHHhcCCCCEEEcCCCCcc
Confidence 3489999998764211110 10 11111 01234566666665 7899999997654
No 51
>1sml_A Protein (penicillinase); metallo-beta-lactamase, antibiotic resistance, binuclear zinc, hydrolase; 1.70A {Stenotrophomonas maltophilia} SCOP: d.157.1.1 PDB: 2aio_A* 2fm6_A 2fu6_A 2fu7_A* 2fu8_A* 2fu9_A* 2gfj_A* 2gfk_A* 2h6a_A 2hb9_A* 2qdt_A* 2qjs_A 2qin_A
Probab=99.10 E-value=6e-10 Score=102.38 Aligned_cols=180 Identities=13% Similarity=0.123 Sum_probs=107.1
Q ss_pred EEEec---CcEEEEEeCCeEEEEccccCCCCCCCcccccccCccccchhhhhhhccccCCCCCCCCCcCEEEecCCCCCC
Q 018490 81 LTYLE---GNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQIVLIGMKTLVQLSDLPQVDCLLITQSLDDH 157 (355)
Q Consensus 81 itwlG---hss~li~~~g~~iLiDP~~sg~~~~p~~~~~~g~~~r~~~~~~~~~g~~~~~~~~~lp~iD~VlISH~H~DH 157 (355)
+.++| .+|++|+.++..+||||..+. . ...+ .+.++. ..++. .+||+|++||.|.||
T Consensus 30 v~~ig~~~~~~~li~~~~~~iLID~G~~~--~--~~~l----~~~l~~---------~g~~~---~~i~~IilTH~H~DH 89 (269)
T 1sml_A 30 TWQIGTEDLTALLVQTPDGAVLLDGGMPQ--M--ASHL----LDNMKA---------RGVTP---RDLRLILLSHAHADH 89 (269)
T ss_dssp EEECSBTTBCCEEEEETTEEEEECCBSGG--G--HHHH----HHHHHH---------TTCCG---GGEEEEECSCCSHHH
T ss_pred EEEecCCCcEEEEEEeCCceEEEECCCCc--c--HHHH----HHHHHH---------cCCCh---HHCcEEEeCCCCccc
Confidence 45544 579999999999999993321 0 0001 001111 01111 268999999999999
Q ss_pred CChhhHHHhhhcCCCceEEEcCChHHHHhhcC---------------CceEEcCCCceEEeCcccCCceEEEEEecC-cc
Q 018490 158 CHLKTLKPLSKMSPNLKVIATPNAKTLLDPLF---------------QNVTYVEPGQSSEIEGRNGSKLRVKATAGP-VL 221 (355)
Q Consensus 158 ld~~tl~~l~~~~~~~~v~~~~~~~~~l~~~~---------------~~v~~l~~~e~~~l~~~~~~~l~i~~~pa~-~~ 221 (355)
.+++..|.+.+ ++++|+++.....++... .....++.++.+.++ +++|++++.. |+
T Consensus 90 --~gg~~~l~~~~-~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g-----~~~i~~~~~pGHt 161 (269)
T 1sml_A 90 --AGPVAELKRRT-GAKVAANAESAVLLARGGSDDLHFGDGITYPPANADRIVMDGEVITVG-----GIVFTAHFMAGHT 161 (269)
T ss_dssp --HTTHHHHHHHS-SCEEEECHHHHHHHHTTTCSBTTTBTSSCCCCCCCSEECCTTCEEEET-----TEEEEEEECCSSS
T ss_pred --cCCHHHHHHhc-CCeEEECHHHHHHHhcCCccccccccccCCCCCCCCeEeCCCCEEEEC-----CEEEEEEECCCCC
Confidence 58888888765 789999887766554321 123567888888987 7777666543 32
Q ss_pred CCCCCCCccEEEEEec-CCce-eEEEcCCCCCCcccccccCCcEEEEccccccCCCceeccCHHHHHHHHHHcCCCEEEE
Q 018490 222 GPPWQRPENGYLVNSS-QGQL-TLYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLAKLLHAKFIVP 299 (355)
Q Consensus 222 g~~~~~~~~g~~i~~~-~~~~-~i~~sGDt~~~~~~~~~~~~Dl~~l~~g~~~~~~~~~h~~~~ea~~~~~~l~~k~~ip 299 (355)
. ...+|+++.. +++. .+++ ||+.+..... ..+ .+. .+. .. ....++++.+..++++.++|
T Consensus 162 ~-----g~~~~~~~~~~~~~~~~l~~-gD~l~~~~~~---~~~-----~~~--~~~-~~-~~~~~sl~~l~~l~~~~l~~ 223 (269)
T 1sml_A 162 P-----GSTAWTWTDTRNGKPVRIAY-ADSLSAPGYQ---LQG-----NPR--YPH-LI-EDYRRSFATVRALPCDVLLT 223 (269)
T ss_dssp T-----TCEEEEEEEEETTEEEEEEE-CCCCCCTTCC---CSS-----CTT--CTT-HH-HHHHHHHHHHHTSCCSEEEC
T ss_pred c-----ccEEEEEecccCCceeEEEE-eccccCCCcc---ccc-----CCC--CCc-CH-HHHHHHHHHHHcCCCCEEEe
Confidence 1 1357777652 1122 4555 8986643210 000 000 000 00 12345666677889999999
Q ss_pred eccCCcc
Q 018490 300 MKNGDLD 306 (355)
Q Consensus 300 ~H~~~f~ 306 (355)
-|.+...
T Consensus 224 ~H~~~~~ 230 (269)
T 1sml_A 224 PHPGASN 230 (269)
T ss_dssp SSGGGGT
T ss_pred CCCCccc
Confidence 9988654
No 52
>4hl2_A Beta-lactamase NDM-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ZZ7; 1.05A {Klebsiella pneumoniae} PDB: 4hl1_A* 4h0d_A* 4gyu_A* 4gyq_A 3q6x_A* 3spu_A 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A
Probab=99.07 E-value=1.2e-10 Score=105.54 Aligned_cols=169 Identities=12% Similarity=0.100 Sum_probs=100.3
Q ss_pred EecCcEEEEEeCCeEEEEccccCCCCCCCcccccccCccccchhhhhhhccccCCCCCCCCCcCEEEecCCCCCCCChhh
Q 018490 83 YLEGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQIVLIGMKTLVQLSDLPQVDCLLITQSLDDHCHLKT 162 (355)
Q Consensus 83 wlGhss~li~~~g~~iLiDP~~sg~~~~p~~~~~~g~~~r~~~~~~~~~g~~~~~~~~~lp~iD~VlISH~H~DHld~~t 162 (355)
+++.+||+|+.++..|||||.++. .. ...+ +..+.. ...+ +||+|++||.|.|| .+.
T Consensus 45 ~~~~n~~li~~~~~~iLID~G~~~-~~--~~~l-------~~~l~~----------~~~~-~i~~vi~TH~H~DH--~gg 101 (243)
T 4hl2_A 45 AVASNGLIVRDGGRVLVVDTAWTD-DQ--TAQI-------LNWIKQ----------EINL-PVALAVVTHAHQDK--MGG 101 (243)
T ss_dssp EEEEEEEEEEETTEEEEESCCSSH-HH--HHHH-------HHHHHH----------HTCC-CEEEEEECSSSHHH--HTT
T ss_pred cccceEEEEEECCcEEEEECCCCC-cc--HHHH-------HHHHHH----------hhCC-CeeEEEECCCCccc--cCC
Confidence 467899999999999999994320 00 0001 011110 0011 58999999999999 588
Q ss_pred HHHhhhcCCCceEEEcCChHHHHhhcCC----c------eEEcCCCceEEeCcccCCceEEE-EEecCccCCCCCCCccE
Q 018490 163 LKPLSKMSPNLKVIATPNAKTLLDPLFQ----N------VTYVEPGQSSEIEGRNGSKLRVK-ATAGPVLGPPWQRPENG 231 (355)
Q Consensus 163 l~~l~~~~~~~~v~~~~~~~~~l~~~~~----~------v~~l~~~e~~~l~~~~~~~l~i~-~~pa~~~g~~~~~~~~g 231 (355)
+..+.+. ++++|+++.....++.... . ...+..++.+.++ ++++. .+|++ +. ...+
T Consensus 102 ~~~l~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g-----~~~v~~~~pGH-t~-----g~~~ 168 (243)
T 4hl2_A 102 MDALHAA--GIATYANALSNQLAPQEGMVAAQHSLTFAANGWVEPATAPNFG-----PLKVFYPGPGH-TS-----DNIT 168 (243)
T ss_dssp HHHHHHT--TCEEEEEHHHHHHGGGTTCCCCSEEECBCTTSBBCGGGSTTCT-----TEEEECCCSSS-ST-----TCCE
T ss_pred HHHHHhC--CCeEEECHHHHHHHhcccccccccccccccceEecCCCeEEEC-----CEEEEeCCCCC-Cc-----CCEE
Confidence 8888764 7999999888777765421 1 1224456666665 78883 23432 21 1246
Q ss_pred EEEEecCCceeEEEcCCCCCCcccccccCCcEEEEccccccCCCceeccCHHHHHHHHHH-c-CCCEEEEeccCC
Q 018490 232 YLVNSSQGQLTLYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLAKL-L-HAKFIVPMKNGD 304 (355)
Q Consensus 232 ~~i~~~~~~~~i~~sGDt~~~~~~~~~~~~Dl~~l~~g~~~~~~~~~h~~~~ea~~~~~~-l-~~k~~ip~H~~~ 304 (355)
+.++ +.+++|+||+.+.......+.. +. .+. ....++++.+.. + +.+.++|.|...
T Consensus 169 ~~~~----~~~~lf~GD~~~~~~~~~~~~~-----~~-------~d~-~~~~~sl~~l~~~l~~~~~v~pgHg~~ 226 (243)
T 4hl2_A 169 VGID----GTDIAFGGCLIKDSKAKSLGNL-----GD-------ADT-EHYAASARAFGAAFPKASMIVMSHSAP 226 (243)
T ss_dssp EEET----TTTEEECTTTCCCTTCSCCCCC-----TT-------CCT-TTHHHHHHHHHHHSTTCCEEECSSSCC
T ss_pred EEEc----CCCEEEEcceeeeccCCCcCCC-----CC-------CCH-HHHHHHHHHHHhhCCCceEEEeCCCCc
Confidence 6664 2479999999874221111111 11 110 123455554543 4 578999999764
No 53
>3aj3_A MLR6805 protein, 4-pyridoxolactonase; Zn-protein, metallo-beta-lactamase, hydrolase; 1.58A {Mesorhizobium loti} PDB: 3aj0_A
Probab=99.07 E-value=7.9e-10 Score=101.69 Aligned_cols=146 Identities=14% Similarity=0.118 Sum_probs=84.1
Q ss_pred EEEecCcEEEEEeCCeEEEEccccCCCCC-CCccccc--ccCcccc-chhhhhhhccccCCCCCCCCCcCEEEecCCCCC
Q 018490 81 LTYLEGNSWLWDLDGVKVLVDPILVGNLD-FGIPWLF--DAGKKFL-KSFQIVLIGMKTLVQLSDLPQVDCLLITQSLDD 156 (355)
Q Consensus 81 itwlGhss~li~~~g~~iLiDP~~sg~~~-~p~~~~~--~g~~~r~-~~~~~~~~g~~~~~~~~~lp~iD~VlISH~H~D 156 (355)
...++.+|+||+.++..||||+..+.... .+..|.. ....+.+ ..+. . ..+++ .+||+|++||.|+|
T Consensus 30 ~~~~~~~~~li~~~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~~l~~~l~--~----~g~~~---~~i~~VilTH~H~D 100 (274)
T 3aj3_A 30 EVRFPVYSILIEHAEGRFLIDTGYDYDHVMKVLPFEKPIQEKHQTIPGALG--L----LGLEP---RDIDVVVNSHFHFD 100 (274)
T ss_dssp EEEEEEEEEEEEETTEEEEECCCCCHHHHHHHCGGGCCBCCGGGSHHHHHH--H----TTCCG---GGCCEEECSCCSGG
T ss_pred EEEeeEEEEEEEeCCccEEEECCCCcccccCccccCCcccCccccHHHHHH--H----cCCCH---HHCCEEEecCcCcc
Confidence 34677899999999999999994431000 0000000 0000001 1111 0 11222 26899999999999
Q ss_pred CCChhhHHHhhhcCCCceEEEcCChHHHHhhc----------------------------------CCceEEcCCCceEE
Q 018490 157 HCHLKTLKPLSKMSPNLKVIATPNAKTLLDPL----------------------------------FQNVTYVEPGQSSE 202 (355)
Q Consensus 157 Hld~~tl~~l~~~~~~~~v~~~~~~~~~l~~~----------------------------------~~~v~~l~~~e~~~ 202 (355)
|+ +.+..| +++++|+++.....+... ..++..++ +.++
T Consensus 101 H~--gg~~~~----~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 172 (274)
T 3aj3_A 101 HC--GGNKYF----PHAKKICHRSEVPQACNPQPFEHLGYSDLSFSAEAAEARGATAQLLEGTTRANSTFEGID--GDVD 172 (274)
T ss_dssp GT--TTGGGC----TTSEEEEETTHHHHHHSCCGGGTTTTCCCTTCHHHHHHHTCGGGCCTTCCSTTSCEEEEC--SSEE
T ss_pred cC--CchhhC----CCCEEEECHHHHHHHhCcCCccccccChhhhccccccccccccccccccccCCCCceEcC--Cccc
Confidence 95 676666 378999998776644211 01233443 2355
Q ss_pred eCcccCCceEEEEEecCccCCCCCCCccEEEEEecCCceeEEEcCCCCCCcc
Q 018490 203 IEGRNGSKLRVKATAGPVLGPPWQRPENGYLVNSSQGQLTLYYEPHCVYNQN 254 (355)
Q Consensus 203 l~~~~~~~l~i~~~pa~~~g~~~~~~~~g~~i~~~~~~~~i~~sGDt~~~~~ 254 (355)
++ + .+++..+|++ +. ...+++++.++ +.+++|+||+.+...
T Consensus 173 l~---g-~~~v~~~pGH-t~-----g~~~~~~~~~~-~~~~lf~GD~~~~~~ 213 (274)
T 3aj3_A 173 LA---R-GVKLISTPGH-SI-----GHYSLLVEFPR-RKPILFTIDAAYTQK 213 (274)
T ss_dssp EE---T-TEEEEECTTS-ST-----TCEEEEECCSS-SCCEEEEETTCSSHH
T ss_pred cC---C-EEEEEECCCC-Cc-----eeeEEEEECCC-CCEEEEEechhhhHH
Confidence 55 1 3888777763 21 13688887542 358999999988653
No 54
>2p4z_A Metal-dependent hydrolases of the beta-lactamase superfamily II; metal-dependent hydrolases of the beta-lactamase superfamily hydrolase; 2.10A {Thermoanaerobacter tengcongensis}
Probab=99.06 E-value=3e-10 Score=105.84 Aligned_cols=205 Identities=15% Similarity=0.143 Sum_probs=113.6
Q ss_pred CcEEEEEeCCeEEEEccccCCCCCCCcccccccCccccchhhhhhhccccCCCCCCCCCcCEEEecCCCCCCCChhhHHH
Q 018490 86 GNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQIVLIGMKTLVQLSDLPQVDCLLITQSLDDHCHLKTLKP 165 (355)
Q Consensus 86 hss~li~~~g~~iLiDP~~sg~~~~p~~~~~~g~~~r~~~~~~~~~g~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~ 165 (355)
.+|++|+.++.+||||+ |... .+. +.+... .+ +..+||+|++||.|+|| .+++..
T Consensus 33 g~s~li~~~~~~iLiD~---G~~~---~~~-----~~l~~~---------g~---~~~~i~~v~lTH~H~DH--~ggl~~ 87 (284)
T 2p4z_A 33 GLSLLLKKGNKEIVVDT---GQSE---NFI-----KNCGLM---------GI---DVGRIKKVVLTHGHYDH--IGGLKG 87 (284)
T ss_dssp SCEEEEEETTEEEEECC---CSST---HHH-----HHHHHT---------TC---CGGGCCEEECCCSCHHH--HTTHHH
T ss_pred EEEEEEEECCeEEEEeC---CCCH---HHH-----HHHHHc---------CC---ChhhCCEEEECCCCchh--hccHHH
Confidence 35899999999999999 5321 111 001111 12 22378999999999999 578887
Q ss_pred hhhcCCCceEEEcCChHH-HHhhc--------C----------CceEEcCCCceEEeCcccCCc-eEEEEEecCccCCCC
Q 018490 166 LSKMSPNLKVIATPNAKT-LLDPL--------F----------QNVTYVEPGQSSEIEGRNGSK-LRVKATAGPVLGPPW 225 (355)
Q Consensus 166 l~~~~~~~~v~~~~~~~~-~l~~~--------~----------~~v~~l~~~e~~~l~~~~~~~-l~i~~~pa~~~g~~~ 225 (355)
+.++++++++|+++.... .+... + .++..++ +..++. .+ +.+..+|..|.....
T Consensus 88 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~i~----~gi~~i~~~~~~h~~~~~ 161 (284)
T 2p4z_A 88 LLERNPEVKIYTHKEILNKKYAMRKGGQFEEIGFDLSFYEKYKNNFVLID--KDAEIE----EGFYVITNTDITYDNEFT 161 (284)
T ss_dssp HHHHCTTCEEEEEGGGGSCEEEECSSSCEEECSCCHHHHHHHGGGEEEES--SCEEEE----TTEEEECSCCCCSCCHHH
T ss_pred HHHHcCCCceecCHHHHHHHhccCccccccccccccchhhhcCceEEEeC--CCeEEe----CCEEEEeeeCCccccccC
Confidence 776666899999887653 22100 0 1233332 223443 13 223233333210000
Q ss_pred CCCccEEEEEecCCceeEEEcCCCCCCccccc-ccCCc--EEEEccc------cc-c----CC--C-----ceecc----
Q 018490 226 QRPENGYLVNSSQGQLTLYYEPHCVYNQNFLE-KERSD--IIITPVI------KQ-L----LP--K-----FTLVS---- 280 (355)
Q Consensus 226 ~~~~~g~~i~~~~~~~~i~~sGDt~~~~~~~~-~~~~D--l~~l~~g------~~-~----~~--~-----~~~h~---- 280 (355)
....|.++. +.|++|+ +..+... ....| +++..|. .. + .+ . ...|+
T Consensus 162 --~g~~~~~~~------~~y~~D~-~~de~~~~~~~~dglvli~gcsH~Gi~n~l~~~~~~~~~~~i~~~igg~Hl~~~~ 232 (284)
T 2p4z_A 162 --TKNFFVEKE------GKRIPDK-FLDEVFVVVKEEDGINVVTGCSHAGILNILETARNRFGVSYIKSLIGGFHLRGME 232 (284)
T ss_dssp --HTTEEEEET------TEEEECC-CTTCCEEEEEETTEEEEEESSCTTCHHHHHHHHHHHHTCSCBSEEEECCCCTTCC
T ss_pred --CCceEEEcC------CCEecCC-CCCceEEEEEcCCcEEEEECCCCcCHHHHHHHHHHHcCCCceEEEEEcccCCCCC
Confidence 011366642 2467885 4333222 23567 5564432 00 1 11 1 12488
Q ss_pred --CHHHHHHHHHHcCCCEEEEeccCCccccccccccccccCCHHHHHHHHHhcCCCCeEeccCCCCeEEc
Q 018490 281 --GQEDAVKLAKLLHAKFIVPMKNGDLDSKGFLASIIQSEGTVESFKELLSKELPDAQLLEPTPGEPLEI 348 (355)
Q Consensus 281 --~~~ea~~~~~~l~~k~~ip~H~~~f~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~Ge~~~l 348 (355)
..+++++.++++++++++++|...+. ..+++++.+. .++.....|.++++
T Consensus 233 ~~~~~~a~~~~~~~~~~~l~l~H~~~~~-------------~~~~~~~~~~-----~~v~~a~~G~~i~l 284 (284)
T 2p4z_A 233 EEKVKDIARKIEEYGVKKVLTGHCTGID-------------EYGFLKSVLK-----DKISYLTTSSSIVV 284 (284)
T ss_dssp HHHHHHHHHHHHHTTBCCEEECGGGCHH-------------HHHHHHHHHG-----GGEEECCTTCEEEC
T ss_pred HHHHHHHHHHHHcCCCCEEEeeCcCcHH-------------HHHHHHHHhC-----CCEEEcCCCcEEeC
Confidence 79999999999999999999987532 1334444332 23444558988864
No 55
>2qed_A Hydroxyacylglutathione hydrolase; metallo-B- superfamily, salmonella typhimurium LT2; 1.45A {Salmonella typhimurium} SCOP: d.157.1.2
Probab=99.05 E-value=8.7e-10 Score=101.35 Aligned_cols=161 Identities=17% Similarity=0.245 Sum_probs=99.0
Q ss_pred CCceEEEEe----cCcEEEEEe-CCeEEEEccccCCCCCCCcccccccCccccchhhhhhhccccCCCCCCCCCcCEEEe
Q 018490 76 TDVFKLTYL----EGNSWLWDL-DGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQIVLIGMKTLVQLSDLPQVDCLLI 150 (355)
Q Consensus 76 ~~~~~itwl----Ghss~li~~-~g~~iLiDP~~sg~~~~p~~~~~~g~~~r~~~~~~~~~g~~~~~~~~~lp~iD~VlI 150 (355)
.+.|+|+.+ +++||+|+. ++..+|||| |... .+ +..+. ...+ ++++|++
T Consensus 5 ~g~m~i~~i~~~~~n~~yli~~~~~~~vlID~---G~~~----~i-------~~~l~-----------~~g~-~i~~Il~ 58 (258)
T 2qed_A 5 IGSMNLNSIPAFQDNYIWVLTNDEGRCVIVDP---GEAA----PV-------LKAIA-----------EHKW-MPEAIFL 58 (258)
T ss_dssp --CCEEEEEEETTTEEEEEEECTTSEEEEECC---SCHH----HH-------HHHHH-----------HHTC-EEEEEEC
T ss_pred cCccEEEEecccCceEEEEEEECCCcEEEEeC---CCcH----HH-------HHHHH-----------HcCC-CCCEEEe
Confidence 455666655 456999998 688999999 4211 11 01111 0122 6899999
Q ss_pred cCCCCCCCChhhHHHhhhcCCCceEEEcCChHHHHhhcCCceEEcCCCceEEeCcccCCceEEEEEecC-ccCCCCCCCc
Q 018490 151 TQSLDDHCHLKTLKPLSKMSPNLKVIATPNAKTLLDPLFQNVTYVEPGQSSEIEGRNGSKLRVKATAGP-VLGPPWQRPE 229 (355)
Q Consensus 151 SH~H~DHld~~tl~~l~~~~~~~~v~~~~~~~~~l~~~~~~v~~l~~~e~~~l~~~~~~~l~i~~~pa~-~~g~~~~~~~ 229 (355)
||.|+|| .+++..|.++++++++|++.... +. .....+..|+.+.++ +++++++++. |+. ..
T Consensus 59 TH~H~DH--~gg~~~l~~~~~~~~v~~~~~~~--~~---~~~~~~~~g~~~~~g-----~~~~~vi~tPGHt~-----g~ 121 (258)
T 2qed_A 59 THHHHDH--VGGVKELLQHFPQMTVYGPAETQ--DK---GATHLVGDGDTIRVL-----GEKFTLFATPGHTL-----GH 121 (258)
T ss_dssp CSCCHHH--HTTHHHHHHHCTTCEEEECGGGG--GG---TCSEECCTTCEEEET-----TEEEEEEECCSSST-----TC
T ss_pred CCCCccc--cCCHHHHHHHCCCCEEEeccccc--CC---CCcEEeCCCCEEEEC-----CcEEEEEECCCCCC-----CC
Confidence 9999999 68888888877569999986542 11 245678889999997 5566555432 221 12
Q ss_pred cEEEEEecCCceeEEEcCCCCCCcccccccCCcEEEEccccccCCCceeccCHH---HHHHHHHHcCCC-EEEEeccCC
Q 018490 230 NGYLVNSSQGQLTLYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQE---DAVKLAKLLHAK-FIVPMKNGD 304 (355)
Q Consensus 230 ~g~~i~~~~~~~~i~~sGDt~~~~~~~~~~~~Dl~~l~~g~~~~~~~~~h~~~~---ea~~~~~~l~~k-~~ip~H~~~ 304 (355)
.+|+ . .+++|+||+.+.... |. . +. -+.+ ++++.+..+.++ .++|-|...
T Consensus 122 ~~~~--~----~~~lftGD~l~~~~~-------------g~-~---~~--~~~~~~~~sl~~l~~l~~~~~v~pgHg~~ 175 (258)
T 2qed_A 122 VCYF--S----RPYLFCGDTLFSGGC-------------GR-L---FE--GTPSQMYQSLMKINSLPDDTLICCAHEYT 175 (258)
T ss_dssp EEEE--E----TTEEEEETTEETTEE-------------CC-C---SS--SCHHHHHHHHHHHHTSCTTCEEEESBCCH
T ss_pred eEEE--c----CCEEEECCCCCCCCc-------------CC-C---CC--CCHHHHHHHHHHHHcCCCCeEEECCCcch
Confidence 4555 2 268999999764321 11 0 00 1233 344455567776 688999754
No 56
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.04 E-value=5.5e-10 Score=111.32 Aligned_cols=138 Identities=12% Similarity=0.152 Sum_probs=91.8
Q ss_pred ceEEEEe-----cCcEEEE--EeCCeEEEEccccCCCCCCCcccccccCccccchhhhhhhccccCCCCCCCCCcCEEEe
Q 018490 78 VFKLTYL-----EGNSWLW--DLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQIVLIGMKTLVQLSDLPQVDCLLI 150 (355)
Q Consensus 78 ~~~itwl-----Ghss~li--~~~g~~iLiDP~~sg~~~~p~~~~~~g~~~r~~~~~~~~~g~~~~~~~~~lp~iD~VlI 150 (355)
.|+|..+ +++||+| +.++..||||| +... ..+ +..+. ...+ +|++||+
T Consensus 3 ~m~i~~~~~~~~~~n~yli~~~~~~~~ilID~---g~~~---~~~-------~~~l~-----------~~~~-~i~~Il~ 57 (474)
T 3tp9_A 3 AMYLRRFYDEGLAHASYLVGCQETGEACVIDP---ARDV---EPY-------LLTAK-----------REGL-RIVAALE 57 (474)
T ss_dssp CEEEEEEEETTTTEEEEEEEETTTCEEEEESC---CSCC---HHH-------HHHHH-----------HHTC-EEEEEEC
T ss_pred ceEEEEEecCCceeEEEEEEECCCCEEEEEcC---CCCh---HHH-------HHHHH-----------HcCC-eeEEEEc
Confidence 4666544 7899999 67889999999 4211 111 11111 0122 6899999
Q ss_pred cCCCCCCCChhhHHHhhhcCCCceEEEcCChHHHHhhcC---CceEEcCCCceEEeCcccCCceEEEEEecC-ccCCCCC
Q 018490 151 TQSLDDHCHLKTLKPLSKMSPNLKVIATPNAKTLLDPLF---QNVTYVEPGQSSEIEGRNGSKLRVKATAGP-VLGPPWQ 226 (355)
Q Consensus 151 SH~H~DHld~~tl~~l~~~~~~~~v~~~~~~~~~l~~~~---~~v~~l~~~e~~~l~~~~~~~l~i~~~pa~-~~g~~~~ 226 (355)
||.|.||+ +++..|.+++ ++++|+++.....+.... .....+..++.+.++ +++|++++.. |+.
T Consensus 58 TH~H~DH~--gg~~~l~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g-----~~~i~~i~tPGHt~---- 125 (474)
T 3tp9_A 58 THIHADFV--SGAREMADRA-GAAICVSDEGPPEWKSEYVKAYPHRLLKDGDELHFG-----NVRIVVMHTPGHTP---- 125 (474)
T ss_dssp SSCCSSSC--CCHHHHHHHH-CCEEEEECCSCGGGCCGGGGGSSEEEECTTCEEEET-----TEEEEEEECCSSSS----
T ss_pred CcCchhhh--CCHHHHHHHH-CCcEEEcCcchhhhcccccccccceECCCCCEEEEC-----CEEEEEEECCCCCC----
Confidence 99999995 7888887764 799999987665444321 234788899999998 6666665443 221
Q ss_pred CCccEEEEEecCC---ceeEEEcCCCCCCc
Q 018490 227 RPENGYLVNSSQG---QLTLYYEPHCVYNQ 253 (355)
Q Consensus 227 ~~~~g~~i~~~~~---~~~i~~sGDt~~~~ 253 (355)
...+|++...++ +.+++|+||+-+..
T Consensus 126 -g~~~~~~~~~~~~~~~~~~lftGD~lf~~ 154 (474)
T 3tp9_A 126 -EHVSYLLYDGKTSPDVPMALFSGDFVFVG 154 (474)
T ss_dssp -SCEEEEEEETTTEEEEEEEEEEETSEETT
T ss_pred -CCEEEEEecCCCCCCCceEEEeCCccccC
Confidence 236888876521 12799999997643
No 57
>3iog_A Beta-lactamase; hydrolase, antibiotic resistance, metal-binding; HET: SDF; 1.41A {Aeromonas hydrophila} SCOP: d.157.1.1 PDB: 1x8i_A 3fai_A* 3iof_A* 1x8h_A 2qds_A* 2gkl_A* 1x8g_A* 3f9o_A 3t9m_A 3sw3_A
Probab=99.03 E-value=1.5e-10 Score=103.30 Aligned_cols=167 Identities=14% Similarity=0.073 Sum_probs=96.0
Q ss_pred EecCcEEEEEeCCeEEEEccccCCCCCCCcccccccCccccchhhhhhhccccCCCCCCCCCcCEEEecCCCCCCCChhh
Q 018490 83 YLEGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQIVLIGMKTLVQLSDLPQVDCLLITQSLDDHCHLKT 162 (355)
Q Consensus 83 wlGhss~li~~~g~~iLiDP~~sg~~~~p~~~~~~g~~~r~~~~~~~~~g~~~~~~~~~lp~iD~VlISH~H~DHld~~t 162 (355)
|.+.+|++|+.++..|||||..+. .. ...+ ...+. .....+|++|++||.|.|| .+.
T Consensus 20 ~~~~n~~li~~~~~~iLiD~G~~~-~~--~~~~-------~~~l~-----------~~~~~~i~~ii~TH~H~DH--~gg 76 (227)
T 3iog_A 20 YVQENSMVYFGAKGVTVVGATWTP-DT--AREL-------HKLIK-----------RVSRKPVLEVINTNYHTDR--AGG 76 (227)
T ss_dssp SSCEEEEEEECSSCEEEESCCSSH-HH--HHHH-------HHHHH-----------TTCCSCEEEEECSSSSHHH--HTT
T ss_pred cccCcEEEEEeCCeEEEEECCCCh-HH--HHHH-------HHHHH-----------HhcCCCeEEEEeCCCchhh--cCh
Confidence 456799999999999999994320 00 0001 01111 1122378999999999999 588
Q ss_pred HHHhhhcCCCceEEEcCChHHHHhhc----------C----C--c----eEEcCCCceEEeCcccCCceEEEEE-ecCcc
Q 018490 163 LKPLSKMSPNLKVIATPNAKTLLDPL----------F----Q--N----VTYVEPGQSSEIEGRNGSKLRVKAT-AGPVL 221 (355)
Q Consensus 163 l~~l~~~~~~~~v~~~~~~~~~l~~~----------~----~--~----v~~l~~~e~~~l~~~~~~~l~i~~~-pa~~~ 221 (355)
+..+.+ +++++|+++.....+++. + . . ....+ + .+.++ +..+++..+ |++..
T Consensus 77 ~~~l~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~l~---~~~~~~~~~~pGHt~ 149 (227)
T 3iog_A 77 NAYWKS--IGAKVVSTRQTRDLMKSDWAEIVAFTRKGLPEYPDLPLVLPNVVHD-G-DFTLQ---EGKVRAFYAGPAHTP 149 (227)
T ss_dssp HHHHHH--TTCEEEEEHHHHHHHHHHHHHHHHHHHHHCTTSCCCCCCCCSEEES-S-CEEET---TTTEEEECCCCSSSS
T ss_pred HHHHhh--CCCeEEECHHHHHHHHHhhHHHHHHhhcCCCCCCCccccCCCEeec-C-eEEEc---CcEEEEEecCCCCCC
Confidence 888876 589999998876654421 0 0 0 11121 2 36665 335666655 55321
Q ss_pred CCCCCCCccEEEEEecCCceeEEEcCCCCCCcccccccCCcEEEEccccccCCCceeccCHHHHHHHHH--HcCCCEEEE
Q 018490 222 GPPWQRPENGYLVNSSQGQLTLYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLAK--LLHAKFIVP 299 (355)
Q Consensus 222 g~~~~~~~~g~~i~~~~~~~~i~~sGDt~~~~~~~~~~~~Dl~~l~~g~~~~~~~~~h~~~~ea~~~~~--~l~~k~~ip 299 (355)
...++.+.. .+++| ||+.+.... +..+ . .+ -....++++.++ .++++.++|
T Consensus 150 ------g~~~~~~~~----~~~lf-gd~l~~~~~---~~~~----------~--~~-~~~~~~sl~~l~~~~l~~~~i~p 202 (227)
T 3iog_A 150 ------DGIFVYFPD----EQVLY-GGCILKEKL---GNLS----------F--AD-VKAYPQTLERLKAMKLPIKTVIG 202 (227)
T ss_dssp ------SCCEEEETT----TTEEE-CGGGSCSSC---CCCT----------T--CC-TTHHHHHHHHHHHTCCCCSEEEC
T ss_pred ------CcEEEEecC----CCEEE-cccccccCC---CCcC----------c--CC-HHHHHHHHHHHHhccCCCCEEEe
Confidence 124555542 36777 876543211 1110 0 00 012345566666 468999999
Q ss_pred eccCCcc
Q 018490 300 MKNGDLD 306 (355)
Q Consensus 300 ~H~~~f~ 306 (355)
.|...+.
T Consensus 203 gHg~~~~ 209 (227)
T 3iog_A 203 GHDSPLH 209 (227)
T ss_dssp SSSCCEE
T ss_pred CCCCCcC
Confidence 9988764
No 58
>1xm8_A Glyoxalase II; structural genomics, protein structure initiative, CESG, AT2G31350, metallo-hydrolase, zinc/iron binuclear center; 1.74A {Arabidopsis thaliana} SCOP: d.157.1.2 PDB: 2q42_A
Probab=99.02 E-value=4.7e-10 Score=102.93 Aligned_cols=156 Identities=16% Similarity=0.137 Sum_probs=97.9
Q ss_pred EecCc-EEEEEeC--CeEEEEccccCCCCCCCcccccccCccccchhhhhhhccccCCCCCCCCCcCEEEecCCCCCCCC
Q 018490 83 YLEGN-SWLWDLD--GVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQIVLIGMKTLVQLSDLPQVDCLLITQSLDDHCH 159 (355)
Q Consensus 83 wlGhs-s~li~~~--g~~iLiDP~~sg~~~~p~~~~~~g~~~r~~~~~~~~~g~~~~~~~~~lp~iD~VlISH~H~DHld 159 (355)
.++.+ ||+|+.+ +..+|||| +... ... ..+.. ..+ ++++|++||.|.||
T Consensus 8 ~~~~n~~yli~~~~~~~~~lID~---g~~~---~i~--------~~l~~-----------~g~-~i~~Il~TH~H~DH-- 59 (254)
T 1xm8_A 8 CLKDNYAYILHDEDTGTVGVVDP---SEAE---PII--------DSLKR-----------SGR-NLTYILNTHHHYDH-- 59 (254)
T ss_dssp ETTTEEEEEEECTTTCCEEEECC---SSHH---HHH--------HHHHH-----------HTC-CCCEEECSSCCHHH--
T ss_pred ccCCeEEEEEEECCCCEEEEEeC---CCHH---HHH--------HHHHH-----------cCC-CccEEEECCCCCcc--
Confidence 45665 9999874 67999999 4211 111 11110 112 68999999999999
Q ss_pred hhhHHHhhhcCCCceEEEcCChHHHHhhcCCceEEcCCCceEEeCcccCCceEEEEE--ecCccCCCCCCCccEEEEEec
Q 018490 160 LKTLKPLSKMSPNLKVIATPNAKTLLDPLFQNVTYVEPGQSSEIEGRNGSKLRVKAT--AGPVLGPPWQRPENGYLVNSS 237 (355)
Q Consensus 160 ~~tl~~l~~~~~~~~v~~~~~~~~~l~~~~~~v~~l~~~e~~~l~~~~~~~l~i~~~--pa~~~g~~~~~~~~g~~i~~~ 237 (355)
.+++..|.+++ ++++|+++.....+.. ....+..|+.+.++ +++++++ |+ |+. ...+|+++.
T Consensus 60 ~gg~~~l~~~~-~~~v~~~~~~~~~~~~---~~~~~~~g~~~~lg-----~~~~~vi~tPG-Ht~-----g~~~~~~~~- 123 (254)
T 1xm8_A 60 TGGNLELKDRY-GAKVIGSAMDKDRIPG---IDMALKDGDKWMFA-----GHEVHVMDTPG-HTK-----GHISLYFPG- 123 (254)
T ss_dssp HTTHHHHHHHH-CCEEEEEGGGGGGSTT---EEEEECTTCEEEET-----TEEEEEEECCS-SSS-----SCEEEEEGG-
T ss_pred cccHHHHHHHc-CCeEEEchhhhhcCCC---CceeeCCCCEEEEC-----CEEEEEEECCC-CCC-----CcEEEEECC-
Confidence 68888888765 6899998766544432 34567889999997 6555554 44 321 135777643
Q ss_pred CCceeEEEcCCCCCCcccccccCCcEEEEccccccCCCceeccCHH---HHHHHHHHcCCC-EEEEeccCC
Q 018490 238 QGQLTLYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQE---DAVKLAKLLHAK-FIVPMKNGD 304 (355)
Q Consensus 238 ~~~~~i~~sGDt~~~~~~~~~~~~Dl~~l~~g~~~~~~~~~h~~~~---ea~~~~~~l~~k-~~ip~H~~~ 304 (355)
.+++|+||+.+.... |. .+. .+++ ++++.+..+.++ .++|.|...
T Consensus 124 ---~~~lftGD~l~~~~~-------------g~--~~~----~~~~~~~~Sl~~l~~l~~~~~v~pgHg~~ 172 (254)
T 1xm8_A 124 ---SRAIFTGDTMFSLSC-------------GK--LFE----GTPKQMLASLQKITSLPDDTSIYCGHEYT 172 (254)
T ss_dssp ---GTEEEEETTEETTEE-------------CC--CSS----SCHHHHHHHHHHHHTSCTTCEEEESBCCH
T ss_pred ---CCEEEEcCccccCCC-------------CC--CCC----CCHHHHHHHHHHHHccCCCcEEEeCCcch
Confidence 479999999764211 11 000 1233 444555556665 788999764
No 59
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=99.02 E-value=1.2e-09 Score=108.75 Aligned_cols=176 Identities=13% Similarity=0.118 Sum_probs=104.8
Q ss_pred ecCcEEEEE--eCCeEEEEccccCCCCCCCcccccccCccccchhhhhhhccccCCCCCCCCCcCEEEecCCCCCCCChh
Q 018490 84 LEGNSWLWD--LDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQIVLIGMKTLVQLSDLPQVDCLLITQSLDDHCHLK 161 (355)
Q Consensus 84 lGhss~li~--~~g~~iLiDP~~sg~~~~p~~~~~~g~~~r~~~~~~~~~g~~~~~~~~~lp~iD~VlISH~H~DHld~~ 161 (355)
++++||+|. .++..+|||| +... ..+ +..+. ...+ +|++||+||.|.||+ +
T Consensus 35 ~~~nsyli~~~~~~~~vlID~---g~~~---~~~-------~~~l~-----------~~g~-~i~~Il~TH~H~DH~--g 87 (466)
T 3r2u_A 35 LSQASYLIGCQKTGEAMIIDP---IRDL---SSY-------IRVAD-----------EEGL-TITHAAETHIHADFA--S 87 (466)
T ss_dssp TTEEEEEEEETTTCEEEEESC---CSCC---HHH-------HHHHH-----------HHTC-EEEEEECSSCCSSSC--C
T ss_pred ccceEEEEEeCCCCEEEEEcC---CCCH---HHH-------HHHHH-----------HCCC-eeeEEEECCCChhhh--c
Confidence 468999994 5788999999 4211 111 11111 1112 589999999999995 7
Q ss_pred hHHHhhhcCCCceEEEcCChHHHHhhcC--CceEEcCCCceEEeCcccCCceEEEEEecC-ccCCCCCCCccEEEEEecC
Q 018490 162 TLKPLSKMSPNLKVIATPNAKTLLDPLF--QNVTYVEPGQSSEIEGRNGSKLRVKATAGP-VLGPPWQRPENGYLVNSSQ 238 (355)
Q Consensus 162 tl~~l~~~~~~~~v~~~~~~~~~l~~~~--~~v~~l~~~e~~~l~~~~~~~l~i~~~pa~-~~g~~~~~~~~g~~i~~~~ 238 (355)
++..|.+++ ++++|+++.....+.... .....+..++.++++ +++|+++++. |+. ...+|++...+
T Consensus 88 g~~~l~~~~-~a~v~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~g-----~~~l~vi~tPGHT~-----g~~~~~~~~~~ 156 (466)
T 3r2u_A 88 GIRDVAIKL-NANIYVSGESDDTLGYKNMPNHTHFVQHNDDIYVG-----NIKLKVLHTPGHTP-----ESISFLLTDEG 156 (466)
T ss_dssp CHHHHHHHH-CCEEEEECCSCTTTSCCSCCTTCEEECTTCEEEET-----TEEEEEEECCSSST-----TCEEEEEECGG
T ss_pred cHHHHHHhh-CCeEEECcchhhhhccccCCCCCEEeCCCCEEEEC-----CEEEEEEECCCCCC-----CCEEEEEcCCC
Confidence 888888765 799999987544333211 256788999999998 6666665443 321 23688887641
Q ss_pred ---CceeEEEcCCCCCCcccccccCCcEEEEccccccCCCce-eccCHHHHHHHHHHcCCC-EEEEecc
Q 018490 239 ---GQLTLYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFT-LVSGQEDAVKLAKLLHAK-FIVPMKN 302 (355)
Q Consensus 239 ---~~~~i~~sGDt~~~~~~~~~~~~Dl~~l~~g~~~~~~~~-~h~~~~ea~~~~~~l~~k-~~ip~H~ 302 (355)
++.+++|+||+-+... .+..|+.--..+ ...... ..-...++++.+..|..+ +++|-|.
T Consensus 157 ~~~~~~~~lftGD~lf~~~---~gr~dl~~~~~~--~~g~~~~~~~~~~~Sl~kl~~L~~~~~v~PgHg 220 (466)
T 3r2u_A 157 AGAQVPMGLFSGDFIFVGD---IGRPDLLEKAVK--VEGSSEIGAKQMFKSIESIKDLPDYIQIWPGHG 220 (466)
T ss_dssp GTCCSCCEEEEETTBCSSC---BCCCCCCCGGGC--CTTHHHHHHHHHHHHHHHHTTSCTTCEEEESBC
T ss_pred ccCCCceEEEECCcccCCC---CCCcCccccccc--cCCCchHHHHHHHHHHHHHhcCCCCeEEECCCC
Confidence 2456999999987532 234443200000 000000 000123344445556666 5999998
No 60
>1ztc_A Hypothetical protein TM0894; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, hydrolase; HET: MSE; 2.10A {Thermotoga maritima} SCOP: d.157.1.11
Probab=99.02 E-value=4.7e-10 Score=100.38 Aligned_cols=132 Identities=14% Similarity=0.115 Sum_probs=83.6
Q ss_pred ecCcEEEEEeCCeEEEEccccCCCCCCCcccccccCccccchhhhhhhccccCCCCCCCCCcCEEEecCCCCCCCChhhH
Q 018490 84 LEGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQIVLIGMKTLVQLSDLPQVDCLLITQSLDDHCHLKTL 163 (355)
Q Consensus 84 lGhss~li~~~g~~iLiDP~~sg~~~~p~~~~~~g~~~r~~~~~~~~~g~~~~~~~~~lp~iD~VlISH~H~DHld~~tl 163 (355)
.+.+|++|+.++..|||||... . ....+ .+.++.. .+++ .+||+|++||.|+|| .+.+
T Consensus 33 ~~~n~~li~~~~~~iLID~G~~---~-~~~~l----~~~l~~~---------g~~~---~~i~~ViiTH~H~DH--~gg~ 90 (221)
T 1ztc_A 33 HFSTVVYLEHKDRRIIIDPGNL---S-SMDEL----EEKFSEL---------GISP---DDITDVLFTHVHLDH--IFNS 90 (221)
T ss_dssp CBCCEEEEEETTEEEEECCCCG---G-GHHHH----HHHHHHH---------TCCG---GGCCEEECSCCCHHH--HGGG
T ss_pred CceEEEEEEeCCeEEEEECCCC---c-chHHH----HHHHHHc---------CCCH---HHCcEEEEcCCcccc--CCch
Confidence 5678999999999999999332 1 00111 0111111 1222 268999999999999 5777
Q ss_pred HHhhhcCCCceEEEcCChHH-HHhhc--------------CCceEEcCCCceEEeCcccCCceEEEEEecCccCCCCCCC
Q 018490 164 KPLSKMSPNLKVIATPNAKT-LLDPL--------------FQNVTYVEPGQSSEIEGRNGSKLRVKATAGPVLGPPWQRP 228 (355)
Q Consensus 164 ~~l~~~~~~~~v~~~~~~~~-~l~~~--------------~~~v~~l~~~e~~~l~~~~~~~l~i~~~pa~~~g~~~~~~ 228 (355)
..+. ++++|+++.... .++.+ ..++..++.++.+. + +++++..+|+... .
T Consensus 91 ~~~~----~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~-~----~~~~v~~~pGHt~------g 155 (221)
T 1ztc_A 91 VLFE----NATFYVHEVYKTKNYLSFGTIVGRIYSKVISSWKNVVLLKGEESLF-D----EKVKVFHTPWHAR------E 155 (221)
T ss_dssp GGCT----TCEEEEEGGGGGSCGGGGCHHHHHHHHHHHHTCCSEEEECSCCEET-T----TTEEEEECCSSST------T
T ss_pred hhCC----CCEEEEeHHHhhhhhhhhccchhhhhhhccccccceEEeCCCCEEE-C----CeEEEEEcCCCCc------c
Confidence 6665 688998876211 11111 13567777776543 2 2788887775421 2
Q ss_pred ccEEEEEecCCceeEEEcCCCCCCc
Q 018490 229 ENGYLVNSSQGQLTLYYEPHCVYNQ 253 (355)
Q Consensus 229 ~~g~~i~~~~~~~~i~~sGDt~~~~ 253 (355)
..+|+++.++ +.+++|+||+.+..
T Consensus 156 ~~~~~~~~~~-~~~vlftGD~~~~~ 179 (221)
T 1ztc_A 156 HLSFLLDTEN-AGRVLITGDITPNR 179 (221)
T ss_dssp CEEEEEEETT-TEEEEECGGGSCSH
T ss_pred cEEEEEEcCC-CCeEEEEeCccccc
Confidence 3688888762 26899999998754
No 61
>1jjt_A IMP-1 metallo beta-lactamase; metallo-beta-lactamase inhibitor, succinic acid inhibitor, I metallo-beta-lactamase, hydrolase; HET: BDS; 1.80A {Pseudomonas aeruginosa} SCOP: d.157.1.1 PDB: 1dd6_A* 1vgn_A* 2doo_A* 1wup_A 1wuo_A 1jje_A* 1ddk_A
Probab=99.01 E-value=3.8e-10 Score=101.30 Aligned_cols=168 Identities=14% Similarity=0.095 Sum_probs=101.8
Q ss_pred EecCcEEEEEeCCeEEEEccccCCCCCCCcccccccCccccchhhhhhhccccCCCCCCCCCcCEEEecCCCCCCCChhh
Q 018490 83 YLEGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQIVLIGMKTLVQLSDLPQVDCLLITQSLDDHCHLKT 162 (355)
Q Consensus 83 wlGhss~li~~~g~~iLiDP~~sg~~~~p~~~~~~g~~~r~~~~~~~~~g~~~~~~~~~lp~iD~VlISH~H~DHld~~t 162 (355)
.++.+|++|+.++..+||||..+. .. ...+ +..+. ...+ +|++|++||.|.|| .+.
T Consensus 30 ~~~~n~~li~~~~~~iliD~g~~~-~~--~~~~-------~~~l~-----------~~g~-~i~~ii~TH~H~DH--~gg 85 (228)
T 1jjt_A 30 VVPKHGLVVLVNAEAYLIDTPFTA-KD--TEKL-------VTWFV-----------ERGY-KIKGSISSHFHSDS--TGG 85 (228)
T ss_dssp EEEEEEEEEEETTEEEEESCCSSH-HH--HHHH-------HHHHH-----------TTTC-EEEEEECSSSSHHH--HTT
T ss_pred cccceEEEEEECCcEEEEeCCCCh-hh--HHHH-------HHHHH-----------HcCC-CeeEEEeCCCChhh--hcc
Confidence 356799999999999999994320 00 0000 01111 1122 78999999999999 578
Q ss_pred HHHhhhcCCCceEEEcCChHHHHhhcCCc--eEEcCCCceEEeCcccCCceEEE-EEecCccCCCCCCCccEEEEEecCC
Q 018490 163 LKPLSKMSPNLKVIATPNAKTLLDPLFQN--VTYVEPGQSSEIEGRNGSKLRVK-ATAGPVLGPPWQRPENGYLVNSSQG 239 (355)
Q Consensus 163 l~~l~~~~~~~~v~~~~~~~~~l~~~~~~--v~~l~~~e~~~l~~~~~~~l~i~-~~pa~~~g~~~~~~~~g~~i~~~~~ 239 (355)
+..+.+. ++++|+++.....+++.+.. -..+. ++.+.++ +..+++. .+|++.. ...+|.++
T Consensus 86 ~~~l~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~-g~~~~l~---~~~i~~~~~~pGHt~------g~~~~~~~---- 149 (228)
T 1jjt_A 86 IEWLNSR--SIPTYASELTNELLKKDGKVQATNSFS-GVNYWLV---KNKIEVFYPGPGHTP------DNVVVWLP---- 149 (228)
T ss_dssp HHHHHHT--TCCEEEEHHHHHHHHHTTCCCCSEEEC-SSCCEEE---TTTEEEECCCCSSST------TCCEEEET----
T ss_pred HHHHHhC--CCEEEEChHHHHHHHhcCCcCcccccc-CcceEec---CceEEEEecCCCCCC------CcEEEEEC----
Confidence 8777763 78999998887777654321 12232 4555665 2346654 4555321 12466654
Q ss_pred ceeEEEcCCCCCCcccccccCCcEEEEccccccCCCceeccCHHHHHHHHHHc--CCCEEEEeccCCcc
Q 018490 240 QLTLYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLAKLL--HAKFIVPMKNGDLD 306 (355)
Q Consensus 240 ~~~i~~sGDt~~~~~~~~~~~~Dl~~l~~g~~~~~~~~~h~~~~ea~~~~~~l--~~k~~ip~H~~~f~ 306 (355)
+.+++|+||+.+.... + +.+..+. ....++++.++++ +++.++|.|.....
T Consensus 150 ~~~~lf~GD~~~~~~~---~------------~~~~~d~-~~~~~sl~~l~~~~~~~~~i~pgHg~~~~ 202 (228)
T 1jjt_A 150 ERKILFGGCFIKPYGL---G------------NLGDANI-EAWPKSAKLLKSKYGKAKLVVPSHSEVGD 202 (228)
T ss_dssp TTTEEEEETTCCTTCC---C------------CCTTCCT-TTHHHHHHHHHHHTTTCSEEEESSSCCBC
T ss_pred CCcEEEEecccccccc---C------------ccCccCH-HHHHHHHHHHHhhcCCCCEEEcCCCCcCC
Confidence 2479999998763211 0 0000111 1345677777777 88999999987653
No 62
>3q6v_A Beta-lactamase; metalloenzyme, alpha-beta, hydrolase; 1.37A {Serratia fonticola} PDB: 3sd9_A
Probab=99.01 E-value=3.3e-10 Score=101.47 Aligned_cols=166 Identities=11% Similarity=0.050 Sum_probs=98.1
Q ss_pred ecCcEEEEEeCCeEEEEccccCCCCCCCcccccccCccccchhhhhhhccccCCCCCCCCCcCEEEecCCCCCCCChhhH
Q 018490 84 LEGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQIVLIGMKTLVQLSDLPQVDCLLITQSLDDHCHLKTL 163 (355)
Q Consensus 84 lGhss~li~~~g~~iLiDP~~sg~~~~p~~~~~~g~~~r~~~~~~~~~g~~~~~~~~~lp~iD~VlISH~H~DHld~~tl 163 (355)
.+.+|++|+.++..|||||..+. .. ...+ ...+. .+. ..+|++|++||.|.|| .+.+
T Consensus 24 ~~~n~~li~~~~~~iLiD~G~~~-~~--~~~~-------~~~l~--------~~~---~~~i~~ii~TH~H~DH--~gg~ 80 (233)
T 3q6v_A 24 VQENSMVYIGTDGITIIGATWTP-ET--AETL-------YKEIR--------KVS---PLPINEVINTNYHTDR--AGGN 80 (233)
T ss_dssp SCEEEEEEECSSCEEEESCCSSH-HH--HHHH-------HHHHH--------HHC---CCCEEEEECSSSSHHH--HTTH
T ss_pred CCCcEEEEEeCCeEEEEECCCCH-HH--HHHH-------HHHHH--------Hhc---CCCcEEEEECCCChhh--hChH
Confidence 46789999998999999993321 00 0000 01111 011 1378999999999999 5888
Q ss_pred HHhhhcCCCceEEEcCChHHHHhhc---------------C-----CceEEcCCCceEEeCcccCCceEEEEE-ecCccC
Q 018490 164 KPLSKMSPNLKVIATPNAKTLLDPL---------------F-----QNVTYVEPGQSSEIEGRNGSKLRVKAT-AGPVLG 222 (355)
Q Consensus 164 ~~l~~~~~~~~v~~~~~~~~~l~~~---------------~-----~~v~~l~~~e~~~l~~~~~~~l~i~~~-pa~~~g 222 (355)
..+.+ +++++|+++.....+++. . .....++.+ ..++ .+++++..+ |++..
T Consensus 81 ~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~---~~~~~v~~~~pGHt~- 152 (233)
T 3q6v_A 81 AYWKT--LGAKIVATQMTYDLQKSQWGSIVNFTRQGNNKYPNLEKSLPDTVFPGD--FNLQ---NGSIRAMYLGEAHTK- 152 (233)
T ss_dssp HHHHH--TTCEEEEEHHHHHHHHHHHHHHHHHHHHHSTTCCCCCCCCCSEEESSC--EEET---TTTEEEECCCCSSSS-
T ss_pred HHHhh--CCCEEEEcHHHHHHHHhhhHHHHHHHhccccccccccccCCCEEeCCC--eEEc---CceEEEEECCCCCCc-
Confidence 88874 589999998776654431 0 011223333 3343 236777666 55321
Q ss_pred CCCCCCccEEEEEecCCceeEEEcCCCCCCcccccccCCcEEEEccccccCCCceeccCHHHHHHHHHHc------CCCE
Q 018490 223 PPWQRPENGYLVNSSQGQLTLYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLAKLL------HAKF 296 (355)
Q Consensus 223 ~~~~~~~~g~~i~~~~~~~~i~~sGDt~~~~~~~~~~~~Dl~~l~~g~~~~~~~~~h~~~~ea~~~~~~l------~~k~ 296 (355)
...++.+.. .+++| ||+.+...+.. .+..+ .....++++.++.+ +++.
T Consensus 153 -----g~~~~~~~~----~~~lf-gD~~~~~~~~~---------------~~~~~-~~~~~~sl~~l~~l~~~~~~~~~~ 206 (233)
T 3q6v_A 153 -----DGIFVYFPA----ERVLY-GNCILKENLGN---------------MSFAN-RTEYPKTLEKLKGLIEQGELKVDS 206 (233)
T ss_dssp -----SCCEEEETT----TTEEE-CTTTSCSSCCC---------------CTTCC-TTHHHHHHHHHHHHHHTTSSCCSE
T ss_pred -----CcEEEEecc----CCEEE-CceeccccCCC---------------CCcCC-HHHHHHHHHHHHHhhhcccCCCeE
Confidence 123555532 36777 99876532110 11001 12456778888888 9999
Q ss_pred EEEeccCCcc
Q 018490 297 IVPMKNGDLD 306 (355)
Q Consensus 297 ~ip~H~~~f~ 306 (355)
++|.|...+.
T Consensus 207 i~pgHg~~~~ 216 (233)
T 3q6v_A 207 IIAGHDTPIH 216 (233)
T ss_dssp EECSSSSSEE
T ss_pred EECCCCCccC
Confidence 9999987543
No 63
>2y8b_A Metallo-B-lactamase; hydrolase, cephalosporins, antibiotic recognition; 1.70A {Pseudomonas aeruginosa} PDB: 2y8a_A 2y87_A 2yz3_A* 2whg_A* 2wrs_A* 1ko3_A 1ko2_A
Probab=98.98 E-value=8e-10 Score=101.73 Aligned_cols=170 Identities=12% Similarity=0.072 Sum_probs=101.6
Q ss_pred EecCcEEEEEeCCeEEEEccccCCCCCCCcccccccCccccchhhhhhhccccCCCCCCCCCcCEEEecCCCCCCCChhh
Q 018490 83 YLEGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQIVLIGMKTLVQLSDLPQVDCLLITQSLDDHCHLKT 162 (355)
Q Consensus 83 wlGhss~li~~~g~~iLiDP~~sg~~~~p~~~~~~g~~~r~~~~~~~~~g~~~~~~~~~lp~iD~VlISH~H~DHld~~t 162 (355)
.++.+|++|+.++..+||||..+. .. ...+ +..+.. .... +||+|++||.|.|| .+.
T Consensus 65 ~~~~n~~li~~~~~~iLID~G~~~-~~--~~~l-------~~~l~~----------~~g~-~i~~VilTH~H~DH--~gg 121 (265)
T 2y8b_A 65 VYSSNGLIVRDADELLLIDTAWGA-KN--TVAL-------LAEIEK----------QIGL-PVTRSISTHFHDDR--VGG 121 (265)
T ss_dssp EEEEEEEEEEETTEEEEESCCSSH-HH--HHHH-------HHHHHH----------HTCS-CEEEEECSSSSHHH--HTT
T ss_pred cccceEEEEEECCeEEEEeCCCCH-HH--HHHH-------HHHHHH----------hcCC-CeEEEEeCCCChhh--cCC
Confidence 467899999999999999993310 00 0001 111110 0011 68999999999999 578
Q ss_pred HHHhhhcCCCceEEEcCChHHHHhhcCC--ceEEc----CCCceEEeCcccCCceEE-EEEecCccCCCCCCCccEEEEE
Q 018490 163 LKPLSKMSPNLKVIATPNAKTLLDPLFQ--NVTYV----EPGQSSEIEGRNGSKLRV-KATAGPVLGPPWQRPENGYLVN 235 (355)
Q Consensus 163 l~~l~~~~~~~~v~~~~~~~~~l~~~~~--~v~~l----~~~e~~~l~~~~~~~l~i-~~~pa~~~g~~~~~~~~g~~i~ 235 (355)
+..+.+. ++++|+++.....++.... .-..+ +.++.+.++ ++++ ..+|++.. ...+|.++
T Consensus 122 ~~~~~~~--~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-----~~~v~~~~pGHt~------g~~~~~~~ 188 (265)
T 2y8b_A 122 VDVLRAA--GVATYTSPLTRQLAEAAGNEVPAHSLKALSSSGDVVRFG-----PVEVFYPGAAHSG------DNLVVYVP 188 (265)
T ss_dssp HHHHHHT--TCEEEECHHHHHHHHHTTCCCCSEECSSCSSTTEEEEET-----TEEEEECCSSSST------TCCEEEET
T ss_pred HHHHhhC--CCeEEECHHHHHHHHhcccccccccccccCCCCcEEeec-----CEEEEecCCCCCC------CCEEEEec
Confidence 8777763 7999999888776655421 11122 455666665 7888 45665421 13466664
Q ss_pred ecCCceeEEEcCCCCCCcccccccCCcEEEEccccccCCCceeccCHHHHHHHHHHc--CCCEEEEeccCCc
Q 018490 236 SSQGQLTLYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLAKLL--HAKFIVPMKNGDL 305 (355)
Q Consensus 236 ~~~~~~~i~~sGDt~~~~~~~~~~~~Dl~~l~~g~~~~~~~~~h~~~~ea~~~~~~l--~~k~~ip~H~~~f 305 (355)
. .+++|+||+.+.......+..+ ..+ -....++++.+.++ +.+.++|.|....
T Consensus 189 ~----~~~lf~GD~~~~~~~~~~~~~~------------~~d-~~~~~~sl~~l~~~~~~~~~v~pgHg~~~ 243 (265)
T 2y8b_A 189 A----VRVLFGGCAVHEASRESAGNVA------------DAN-LAEWPATIKRIQQRYPEAEVVIPGHGLPG 243 (265)
T ss_dssp T----TTEEEEETTSCCTTCCSCCCCT------------TCC-TTTHHHHHHHHHHHCTTCSEEEESSSCCB
T ss_pred C----CCEEEEccccccCCCcccCcCC------------cCC-HHHHHHHHHHHHhhCCCCCEEECCCCCCC
Confidence 2 4799999988753111111000 000 01245566666665 7789999997653
No 64
>2p18_A Glyoxalase II; metalloprotein, beta sandwich, alpha-helical domain, hydrola; HET: SPD; 1.80A {Leishmania infantum} PDB: 2p1e_A*
Probab=98.97 E-value=2.1e-09 Score=101.53 Aligned_cols=91 Identities=16% Similarity=0.142 Sum_probs=63.7
Q ss_pred CcCEEEecCCCCCCCChhhHHHhhhcCC------CceEEEcCChHHHHhhcCCceEEcCCCceEEeCcccCCceEEEEEe
Q 018490 144 QVDCLLITQSLDDHCHLKTLKPLSKMSP------NLKVIATPNAKTLLDPLFQNVTYVEPGQSSEIEGRNGSKLRVKATA 217 (355)
Q Consensus 144 ~iD~VlISH~H~DHld~~tl~~l~~~~~------~~~v~~~~~~~~~l~~~~~~v~~l~~~e~~~l~~~~~~~l~i~~~p 217 (355)
+|++||+||.|+|| .+++..|.+.++ ++++|++.... .......+..|+.+.++ +++|++++
T Consensus 84 ~i~~IllTH~H~DH--~gg~~~l~~~~~~~~~~~~~~v~~~~~~~-----~~~~~~~l~~g~~l~lg-----~~~l~vi~ 151 (311)
T 2p18_A 84 TFSTILSTHKHWDH--SGGNAKLKAELEAMNSTVPVVVVGGANDS-----IPAVTKPVREGDRVQVG-----DLSVEVID 151 (311)
T ss_dssp EEEEEEESSSSHHH--HTTHHHHHHHHHSCC--CCCEEEEEGGGT-----CTTCSEEECTTCEEEET-----TEEEEEEE
T ss_pred CccEEEeCCCCccc--cCCHHHHHHhhhhcccCCCCEEEEechhc-----CCCCceEeCCCCEEEEC-----CeEEEEEE
Confidence 78999999999999 578888876543 58898875431 11245667889999997 66665554
Q ss_pred cC-ccCCCCCCCccEEEEEecCCc---e-eEEEcCCCCCCc
Q 018490 218 GP-VLGPPWQRPENGYLVNSSQGQ---L-TLYYEPHCVYNQ 253 (355)
Q Consensus 218 a~-~~g~~~~~~~~g~~i~~~~~~---~-~i~~sGDt~~~~ 253 (355)
+. |+. ...+|+++.+ + . +++|+||+.+..
T Consensus 152 tPGHT~-----g~i~~~~~~~--~~~~~~~~lftGD~l~~~ 185 (311)
T 2p18_A 152 APCHTR-----GHVLYKVQHP--QHPNDGVALFTGDTMFIA 185 (311)
T ss_dssp CCSSST-----TCEEEEEECT--TCGGGCEEEEEETTEETT
T ss_pred CCCCCc-----ccEEEEEecC--CcCCcCCEEEEcCccccC
Confidence 32 221 2368888755 3 5 899999997653
No 65
>2p97_A Hypothetical protein; putative metal-dependent hydrolase, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.157.1.12
Probab=98.95 E-value=2.8e-09 Score=93.91 Aligned_cols=160 Identities=17% Similarity=0.199 Sum_probs=97.1
Q ss_pred ecCcEEEEEeCCeEEEEccccCCCCCCCcccccccCccccchhhhhhhccccCCCCCCCCCcCEEEecCCCCCCCChhhH
Q 018490 84 LEGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQIVLIGMKTLVQLSDLPQVDCLLITQSLDDHCHLKTL 163 (355)
Q Consensus 84 lGhss~li~~~g~~iLiDP~~sg~~~~p~~~~~~g~~~r~~~~~~~~~g~~~~~~~~~lp~iD~VlISH~H~DHld~~tl 163 (355)
++.+|++|+.++..+|||| +... . .. +..+ +++.++++|++||. ||+ +.+
T Consensus 22 ~~~n~~li~~~~~~iliD~---g~~~-~-~~--------~~~l-------------~~~g~i~~ii~TH~--DH~--gg~ 71 (201)
T 2p97_A 22 IDFNGFAWIRPEGNILIDP---VALS-N-HD--------WKHL-------------ESLGGVVWIVLTNS--DHV--RSA 71 (201)
T ss_dssp EEEEEEEECCTTCCEEESC---CCCC-H-HH--------HHHH-------------HHTTCCSEEECSSG--GGC--TTH
T ss_pred cceeEEEEEeCCeeEEEEC---CCCc-H-HH--------HHHH-------------HhcCCCCEEEECCc--hhh--hhH
Confidence 4689999999889999999 4221 0 11 1111 12237999999999 995 788
Q ss_pred HHhhhcCCCceEEEcCChHHHHhhcCCceEEcCCCceEEeCcccCCceEEEEEecCccCCCCCCCccEEEEEecCCceeE
Q 018490 164 KPLSKMSPNLKVIATPNAKTLLDPLFQNVTYVEPGQSSEIEGRNGSKLRVKATAGPVLGPPWQRPENGYLVNSSQGQLTL 243 (355)
Q Consensus 164 ~~l~~~~~~~~v~~~~~~~~~l~~~~~~v~~l~~~e~~~l~~~~~~~l~i~~~pa~~~g~~~~~~~~g~~i~~~~~~~~i 243 (355)
..+.+++ ++++|+++.....++.. ....++.++++ . .++++..+|+-|+. ...+|.+ + + ++
T Consensus 72 ~~~~~~~-~a~v~~~~~~~~~~~~~--~~~~~~~g~~~--~----~~~~~~~~p~gHt~-----g~~~~~~--~--~-~~ 132 (201)
T 2p97_A 72 KEIADQT-YTKIAGPVAEKENFPIY--CDRWLSDGDEL--V----PGLKVMELQGSKTP-----GELALLL--E--E-TT 132 (201)
T ss_dssp HHHHHHS-CCEEEEEGGGTTSCSSC--CSEEECTTCBS--S----TTEEEEEECSSSST-----TEEEEEE--T--T-TE
T ss_pred HHHHHhc-CCEEEEcHhHhhhhccc--CceecCCCCEE--c----ceEEEEECCCCCCC-----CcEEEEE--c--C-CE
Confidence 8888776 59999998766544321 13456666543 2 26888888832321 1245554 3 3 79
Q ss_pred EEcCCCCCCcccccccCCcEEEEccccccCCCceeccCHHH---HHHHHHH-cCCCEEEEeccCCc
Q 018490 244 YYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQED---AVKLAKL-LHAKFIVPMKNGDL 305 (355)
Q Consensus 244 ~~sGDt~~~~~~~~~~~~Dl~~l~~g~~~~~~~~~h~~~~e---a~~~~~~-l~~k~~ip~H~~~f 305 (355)
+|+||+.+... .+..+ +.+ +.+ ..+.++ +++.+.. +++++++|.|.+.+
T Consensus 133 lf~GD~~~~~~---~g~~~--~~~------~~~--~~~~~~~~~sl~~l~~l~~~~~v~pgHg~~~ 185 (201)
T 2p97_A 133 LITGDLVRAYR---AGGLE--ILP------DEK--LMNKQKVVASVRRLAALEKVEAVLVGDGWSV 185 (201)
T ss_dssp EEECSSEEBSS---TTSCE--ECC------GGG--CSCHHHHHHHHHHHHTCTTCCEEEESBBCCB
T ss_pred EEECccccccC---CCccc--cCC------ccc--cCCHHHHHHHHHHHHhcCCCCEEEeCCCcce
Confidence 99999876431 11111 000 011 123444 4444555 57899999997653
No 66
>2fhx_A SPM-1; metallo-beta-lactamase, dinuclear zinc, antibiotic resistanc hydrolase, metal binding protein; 1.90A {Pseudomonas aeruginosa}
Probab=98.88 E-value=1.5e-09 Score=98.02 Aligned_cols=166 Identities=16% Similarity=0.108 Sum_probs=98.1
Q ss_pred cCcEEEEEeC-CeEEEEccccCCCCCCCcccccccCccccchhhhhhhccccCCCCCCCCCcCEEEecCCCCCCCChhhH
Q 018490 85 EGNSWLWDLD-GVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQIVLIGMKTLVQLSDLPQVDCLLITQSLDDHCHLKTL 163 (355)
Q Consensus 85 Ghss~li~~~-g~~iLiDP~~sg~~~~p~~~~~~g~~~r~~~~~~~~~g~~~~~~~~~lp~iD~VlISH~H~DHld~~tl 163 (355)
+.+|++|+.+ +..+||||..+. .. ..-+ +..+. ..+ ....+ +|++||.|.|| .+.+
T Consensus 29 ~~n~~li~~~~~~~iLiD~G~~~-~~--~~~l-------~~~l~-------~~~---~~~~~-~vi~TH~H~DH--~gg~ 85 (246)
T 2fhx_A 29 SSNVLVAKMLDGTVVIVSSPFEN-LG--TQTL-------MDWVA-------KTM---KPKKV-VAINTHFHLDG--TGGN 85 (246)
T ss_dssp TEEEEEEECTTSEEEEESCCSSH-HH--HHHH-------HHHHH-------HHH---CCSEE-EEECCSSSHHH--HTTH
T ss_pred CCCEEEEEeCCCeEEEEeCCCCH-HH--HHHH-------HHHHH-------Hhc---CCCcE-EEEeCCCCccc--cChH
Confidence 5689999876 579999993320 00 0000 01111 001 11234 79999999999 5788
Q ss_pred HHhhhcCCCceEEEcCChHHHHhhc-----------C-----------------CceEEcCCCceEEeCcccCCceEEEE
Q 018490 164 KPLSKMSPNLKVIATPNAKTLLDPL-----------F-----------------QNVTYVEPGQSSEIEGRNGSKLRVKA 215 (355)
Q Consensus 164 ~~l~~~~~~~~v~~~~~~~~~l~~~-----------~-----------------~~v~~l~~~e~~~l~~~~~~~l~i~~ 215 (355)
..+.+ + ++++|+++.....++.. . .++..+..++++.++ +.++++
T Consensus 86 ~~l~~-~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~g-----~~~i~~ 158 (246)
T 2fhx_A 86 EIYKK-M-GAETWSSDLTKQLRLEENKKDRIKAAEFYKNEDLKRRILSSHPVPADNVFDLKQGKVFSFS-----NELVEV 158 (246)
T ss_dssp HHHHH-T-TCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHTCCCCCSEEECTTTCEEEEET-----TEEEEE
T ss_pred HHHhh-c-CCEEEEcHHHHHHHHhcchhhhHHHHhhhccccchhhhcccccCCCCceeecCCCCEEEEC-----CEEEEE
Confidence 77776 3 78999988766543210 0 123456778888887 666666
Q ss_pred E-ecC-ccCCCCCCCccEEEEEecCCceeEEEcCCCCCCcccccccCCcEEEEccccccCCCceeccCHHHHHHHHHHcC
Q 018490 216 T-AGP-VLGPPWQRPENGYLVNSSQGQLTLYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLAKLLH 293 (355)
Q Consensus 216 ~-pa~-~~g~~~~~~~~g~~i~~~~~~~~i~~sGDt~~~~~~~~~~~~Dl~~l~~g~~~~~~~~~h~~~~ea~~~~~~l~ 293 (355)
+ |+. |+. ...++.++ +.+++|+||+.+.... + +.+..+ -....++++.+.+++
T Consensus 159 ~~~~pGHt~-----g~~~~~~~----~~~~lf~GD~~~~~~~----~-----------~~~~~~-~~~~~~sl~~l~~l~ 213 (246)
T 2fhx_A 159 SFPGPAHSP-----DNVVVYFP----KKKLLFGGCMIKPKEL----G-----------YLGDAN-VKAWPDSARRLKKFD 213 (246)
T ss_dssp ECCCCSSST-----TCCEEEET----TTTEEEEETTCCSSCC----C-----------CCTTCC-TTTHHHHHHHGGGSC
T ss_pred EeCCCCCCC-----CCEEEEEc----CCCEEEECCEeccCCC----C-----------CCCCCC-HHHHHHHHHHHHhCC
Confidence 5 232 321 12455553 2489999999874211 0 011011 113466677777788
Q ss_pred CCEEEEeccCCc
Q 018490 294 AKFIVPMKNGDL 305 (355)
Q Consensus 294 ~k~~ip~H~~~f 305 (355)
++.++|.|...+
T Consensus 214 ~~~i~pgHg~~~ 225 (246)
T 2fhx_A 214 AKIVIPGHGEWG 225 (246)
T ss_dssp CSEEEESBSCCB
T ss_pred CCEEECCCCCcC
Confidence 999999998754
No 67
>1qh5_A Glyoxalase II, protein (hydroxyacylglutathione hydrolase); metallo-hydrolase; HET: GSH GBP; 1.45A {Homo sapiens} SCOP: d.157.1.2 PDB: 1qh3_A*
Probab=98.86 E-value=6e-09 Score=95.84 Aligned_cols=123 Identities=17% Similarity=0.158 Sum_probs=79.7
Q ss_pred CcEEEEEeC--CeEEEEccccCCCCCCCcccccccCccccchhhhhhhccccCCCCCCCCCcCEEEecCCCCCCCChhhH
Q 018490 86 GNSWLWDLD--GVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQIVLIGMKTLVQLSDLPQVDCLLITQSLDDHCHLKTL 163 (355)
Q Consensus 86 hss~li~~~--g~~iLiDP~~sg~~~~p~~~~~~g~~~r~~~~~~~~~g~~~~~~~~~lp~iD~VlISH~H~DHld~~tl 163 (355)
++||+|..+ +..+|||| |... ... ..+. ...+ ++++|++||.|+|| .+++
T Consensus 12 n~~yli~~~~~~~~vlID~---G~~~---~i~--------~~l~-----------~~g~-~i~~IllTH~H~DH--~gg~ 63 (260)
T 1qh5_A 12 NYMYLVIDDETKEAAIVDP---VQPQ---KVV--------DAAR-----------KHGV-KLTTVLTTHHHWDH--AGGN 63 (260)
T ss_dssp EEEEEEEETTTTEEEEESC---SSHH---HHH--------HHHH-----------HHTC-EEEEEECCCSSHHH--HTTH
T ss_pred eEEEEEEECCCCEEEEEcC---CCHH---HHH--------HHHH-----------HcCC-CccEEEeCCCCccc--cCCH
Confidence 458999874 68999999 4211 111 1111 0112 58999999999999 6888
Q ss_pred HHhhhcCCCceEEEcCChHHHHhhcCCceEEcCCCceEEeCcccCCceEEEEEecC-ccCCCCCCCccEEEE-EecCCce
Q 018490 164 KPLSKMSPNLKVIATPNAKTLLDPLFQNVTYVEPGQSSEIEGRNGSKLRVKATAGP-VLGPPWQRPENGYLV-NSSQGQL 241 (355)
Q Consensus 164 ~~l~~~~~~~~v~~~~~~~~~l~~~~~~v~~l~~~e~~~l~~~~~~~l~i~~~pa~-~~g~~~~~~~~g~~i-~~~~~~~ 241 (355)
..|.+.+|++++|++.... ......+..|+.+.++ ++++++++.. |+. ...+|++ +....+.
T Consensus 64 ~~l~~~~~~~~v~~~~~~~------~~~~~~~~~g~~~~~g-----~~~~~vi~tPGHt~-----g~~~~~~~~~~~~~~ 127 (260)
T 1qh5_A 64 EKLVKLESGLKVYGGDDRI------GALTHKITHLSTLQVG-----SLNVKCLATPCHTS-----GHICYFVSKPGGSEP 127 (260)
T ss_dssp HHHHHHSTTCEEEESCTTS------TTCSEECCTTCEEEET-----TEEEEEEECCSSST-----TCEEEEEECSSSSSC
T ss_pred HHHHHHCCCCEEEECcccC------CCCCEEeCCCCEEEEC-----CEEEEEEECCCCCC-----CCEEEEEeccCCCCC
Confidence 8888877679999986422 1234567888899997 5666554432 221 1357777 3310145
Q ss_pred eEEEcCCCCCC
Q 018490 242 TLYYEPHCVYN 252 (355)
Q Consensus 242 ~i~~sGDt~~~ 252 (355)
+++|+||+.+.
T Consensus 128 ~~lftGD~l~~ 138 (260)
T 1qh5_A 128 PAVFTGDTLFV 138 (260)
T ss_dssp CEEEEETTEET
T ss_pred CEEEEcCcccc
Confidence 89999999654
No 68
>4eyb_A Beta-lactamase NDM-1; metallo beta lactamase, antibiotic, hydrolase-antibiotic COM; HET: 0WO; 1.16A {Klebsiella pneumoniae} PDB: 4ey2_A* 4eyf_A* 4exy_A 4exs_B 4eyl_A* 3spu_A 3q6x_A* 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A
Probab=98.67 E-value=4.1e-08 Score=90.48 Aligned_cols=79 Identities=15% Similarity=0.162 Sum_probs=54.7
Q ss_pred cCcEEEEEeCCeEEEEccccCCCCCCCcccccccCccccchhhhhhhccccCCCCCCCCCcCEEEecCCCCCCCChhhHH
Q 018490 85 EGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQIVLIGMKTLVQLSDLPQVDCLLITQSLDDHCHLKTLK 164 (355)
Q Consensus 85 Ghss~li~~~g~~iLiDP~~sg~~~~p~~~~~~g~~~r~~~~~~~~~g~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~ 164 (355)
+.||++|..++..+||||.++. .. ..-+ +..+.. ..+. +|++|++||.|.|| .+.+.
T Consensus 74 ~~N~ylv~~~~~~ilIDtg~~~-~~--~~~l-------~~~i~~----------~~~~-~I~~Ii~TH~H~DH--~gg~~ 130 (270)
T 4eyb_A 74 ASNGLIVRDGGRVLVVDTAWTD-DQ--TAQI-------LNWIKQ----------EINL-PVALAVVTHAHQDK--MGGMD 130 (270)
T ss_dssp EEEEEEEEETTEEEEESCCSSH-HH--HHHH-------HHHHHH----------HTCC-CEEEEEECSSSHHH--HTTHH
T ss_pred ceEEEEEEECCEEEEEeCCCCH-HH--HHHH-------HHHHHH----------hcCC-ceEEEEeCCCChhh--cCcHH
Confidence 4689999999999999994321 00 0000 111110 1122 68999999999999 68888
Q ss_pred HhhhcCCCceEEEcCChHHHHhhc
Q 018490 165 PLSKMSPNLKVIATPNAKTLLDPL 188 (355)
Q Consensus 165 ~l~~~~~~~~v~~~~~~~~~l~~~ 188 (355)
.|.+. ++++|+++.....++..
T Consensus 131 ~l~~~--~~~v~~~~~~~~~~~~~ 152 (270)
T 4eyb_A 131 ALHAA--GIATYANALSNQLAPQE 152 (270)
T ss_dssp HHHHT--TCEEEEEHHHHHHGGGG
T ss_pred HHHHC--CCeEEECHHHHHHHHhc
Confidence 88875 79999998887776654
No 69
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=98.44 E-value=3.7e-07 Score=94.56 Aligned_cols=76 Identities=13% Similarity=0.129 Sum_probs=49.3
Q ss_pred CcEEEEEeCCeEEEEccccCCCCCCCcccccccCccccchhhhhhhccccCCCCCCCCCcCEEEecCCCCCCCChhhHHH
Q 018490 86 GNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQIVLIGMKTLVQLSDLPQVDCLLITQSLDDHCHLKTLKP 165 (355)
Q Consensus 86 hss~li~~~g~~iLiDP~~sg~~~~p~~~~~~g~~~r~~~~~~~~~g~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~ 165 (355)
.+|++|+.++..|||||..+. ... ...+..+. ..+ ...+|++|++||.|.|| .+.+..
T Consensus 123 ~N~ylI~~~~g~iLIDtG~~~------~~a----~~~l~~i~-------~~~---~~~~I~~IIlTH~H~DH--~GG~~~ 180 (658)
T 2cfu_A 123 ANITFIRGDSGWIVVDTLTTP------ATA----RAAYELVS-------REL---GERPIRTVIYSHAHADH--FGGVRG 180 (658)
T ss_dssp SCEEEEECSSSEEEECCCSSH------HHH----HHHHHHHH-------HHH---CCCCEEEEECSBSCHHH--HTTGGG
T ss_pred eEEEEEEECCEEEEEECCCCH------HHH----HHHHHHHH-------hhC---CCCCceEEEECCCChhh--hCCHHH
Confidence 589999988889999993321 000 00011111 001 11378999999999999 578777
Q ss_pred hhhc----CCCceEEEcCChHH
Q 018490 166 LSKM----SPNLKVIATPNAKT 183 (355)
Q Consensus 166 l~~~----~~~~~v~~~~~~~~ 183 (355)
|.+. .++++||+++...+
T Consensus 181 l~~~~~~~~~~a~V~a~~~~~~ 202 (658)
T 2cfu_A 181 LVEPQQVASGAVQIIAPAGFME 202 (658)
T ss_dssp TCCHHHHHTTSSEEEEETTHHH
T ss_pred HHhhhhccCCCCEEEEchhHHH
Confidence 7642 35899999987544
No 70
>3h3e_A Uncharacterized protein TM1679; structural genomics, surface entropy reduction, ISFI, beta- lactamase superfamily, PSI-2; 2.75A {Thermotoga maritima}
Probab=98.25 E-value=1.8e-05 Score=72.81 Aligned_cols=168 Identities=19% Similarity=0.134 Sum_probs=89.5
Q ss_pred CEEEecCCCCCCCChhhHHHhhhcCCCceEEEcCChHH-HHhh---c----------CCceEEcCCCceEEeCcccCCce
Q 018490 146 DCLLITQSLDDHCHLKTLKPLSKMSPNLKVIATPNAKT-LLDP---L----------FQNVTYVEPGQSSEIEGRNGSKL 211 (355)
Q Consensus 146 D~VlISH~H~DHld~~tl~~l~~~~~~~~v~~~~~~~~-~l~~---~----------~~~v~~l~~~e~~~l~~~~~~~l 211 (355)
|+|++||.|+|| .+.+..+ +++++|+++.... .... . +.++..++ +..++. .++
T Consensus 63 ~~IvlTH~H~DH--~ggl~~l----~~~~v~~~~~~~~~~~~~~~~ig~~~~~~~~~~~~~~~v~--~~~eI~----pgv 130 (267)
T 3h3e_A 63 KDVLISHGHYDH--AGGLLYL----SGKRVWLRKEALDQKYSGERYAGADWNEVLYYNTGKFVIE--RITEIG----KNM 130 (267)
T ss_dssp SEEECSCSCHHH--HGGGGGC----CSCEEEEEGGGGSEEEETTEECCCCHHHHHHHSEEEEECS--SEEEEE----TTE
T ss_pred CEEEECCCChhh--hCCHHHh----cCCEEEECHHHHHhhhccccccCCCccHHHhcCCcEEEeC--CCeEEc----CCc
Confidence 999999999999 6888777 3799999876543 1110 0 11333333 223333 255
Q ss_pred EEEEEecC--cc----------CC---CCCCCccEEEEEecCCceeEEEcCCC--CCCcc---ccccc--CCcEEEEccc
Q 018490 212 RVKATAGP--VL----------GP---PWQRPENGYLVNSSQGQLTLYYEPHC--VYNQN---FLEKE--RSDIIITPVI 269 (355)
Q Consensus 212 ~i~~~pa~--~~----------g~---~~~~~~~g~~i~~~~~~~~i~~sGDt--~~~~~---~~~~~--~~Dl~~l~~g 269 (355)
.++.-|-. +. |. ..-..+.+.+++++ +.-+.++|-+ |...- .++.- ++..+ +|
T Consensus 131 ~~~g~~r~~~~e~~~~~~~~~~g~~~~D~~~de~~Lvi~~~--~GlvvitGCsH~GI~Niv~~a~~~~g~~i~~v---iG 205 (267)
T 3h3e_A 131 FLLGPANLRGKVPTGDFFVERNGERRKDLFEDEQTLVVRTK--EGLVVITGCSHRGIDNILLDIAETFNERIKMV---VG 205 (267)
T ss_dssp EEECSCCCTTCCCCSCEEEESSSCEEECCCTTCCEEEEEET--TEEEEEESCCTTCHHHHHHHHHTTCSSCEEEE---EE
T ss_pred EEeCCCCCcccccCCCceEEeCCccccCCCCCcEEEEEEcC--CcEEEEeCCCCcCHHHHHHHHHHHhCCCceEE---Ee
Confidence 55422111 10 00 00012567788876 3467777754 33221 11221 22222 25
Q ss_pred cccCCCceeccCHHHHHHHHHHcCCCEEEEeccCCccccccccccccccCCHHHHHHHHHhcCCCCeEeccCCCCeEEcC
Q 018490 270 KQLLPKFTLVSGQEDAVKLAKLLHAKFIVPMKNGDLDSKGFLASIIQSEGTVESFKELLSKELPDAQLLEPTPGEPLEIP 349 (355)
Q Consensus 270 ~~~~~~~~~h~~~~ea~~~~~~l~~k~~ip~H~~~f~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~Ge~~~l~ 349 (355)
|..+-..+ --..+++++.++++++++++|+|..-+. ....+++ + ...++.....|.+++++
T Consensus 206 GfHL~~~~-~~~l~~tl~~l~~~~~~~i~~~HCTg~~-------------a~~~L~~---~--lp~~v~~~~~G~~iei~ 266 (267)
T 3h3e_A 206 GFHLLKSS-DDEIEKIVKAFNELGVETVVPCHCTGER-------------AVDIFKR---E--FLGKIMDCYAGLKLEVS 266 (267)
T ss_dssp ECCCTTSC-HHHHHHHHHHHHHTTCCEEEEETTSCHH-------------HHHHHHH---H--CSSEECCCCTTCEEEEC
T ss_pred ccccCCCC-HHHHHHHHHHHHhcCCCEEEEECCCCHH-------------HHHHHHH---H--CCCCEEEecCceEEEeC
Confidence 52221100 0124788888999999999999986421 1222222 2 24455556689998874
No 71
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=97.33 E-value=5.3e-07 Score=93.31 Aligned_cols=74 Identities=16% Similarity=0.124 Sum_probs=47.3
Q ss_pred CcEEEEEeCCeEEEEccccCCCCCCCcccccccCccccchhhhhhhccccCCCCCCCCCcCEEEecCCCCCCCChhhHHH
Q 018490 86 GNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQIVLIGMKTLVQLSDLPQVDCLLITQSLDDHCHLKTLKP 165 (355)
Q Consensus 86 hss~li~~~g~~iLiDP~~sg~~~~p~~~~~~g~~~r~~~~~~~~~g~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~ 165 (355)
.+|++|+.++..|||||..+.... .-+ +..+. .. . ...+|++|++||.|.||+ +++..
T Consensus 133 ~N~~lI~~~~~~iLIDtG~~~~~a---~~~-------l~~i~-------~~--~-~~~~I~~IilTH~H~DH~--gG~~~ 190 (668)
T 2yhe_A 133 ANMTIIEGDSGLVLIDTLTTAETA---RAA-------LDLYF-------QH--R-PKKPIVAVVYSHSHIDHF--GGARG 190 (668)
Confidence 379999988889999995432110 000 01100 00 0 123789999999999994 77777
Q ss_pred hhhc----CCCceEEEcCCh
Q 018490 166 LSKM----SPNLKVIATPNA 181 (355)
Q Consensus 166 l~~~----~~~~~v~~~~~~ 181 (355)
|.+. .++++||+++..
T Consensus 191 l~~~~~~~~~~a~I~a~~~~ 210 (668)
T 2yhe_A 191 IIDEADVKAGKVKVFAPSGF 210 (668)
Confidence 7652 247889988774
No 72
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A*
Probab=80.46 E-value=2.2 Score=42.75 Aligned_cols=63 Identities=16% Similarity=0.167 Sum_probs=47.1
Q ss_pred CceeccCHHHHHHHHHHcCCCEEEEeccCCccccccccccccccCCHHHHHHHHHhcCCC-CeEeccCCCCeEEcCCC
Q 018490 275 KFTLVSGQEDAVKLAKLLHAKFIVPMKNGDLDSKGFLASIIQSEGTVESFKELLSKELPD-AQLLEPTPGEPLEIPAP 351 (355)
Q Consensus 275 ~~~~h~~~~ea~~~~~~l~~k~~ip~H~~~f~~~g~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~Ge~~~l~~~ 351 (355)
.+..|.+.+|..++++.++||+++|+|-. .. ....+++.+++.|.+ .++..|+.|+.++|...
T Consensus 379 ~~SgHa~~~eL~~~i~~~~Pk~vipvHGe-~~-------------~~~~~~~~~~~~g~~~~~~~~~~~G~~~~l~~~ 442 (562)
T 3bk2_A 379 HASGHASQEELKLILNLTTPRFFLPWHGE-VR-------------HQMNFKWLAESMSRPPEKTLIGENGAVYRLTRE 442 (562)
T ss_dssp CCCSSCCHHHHHHHHHHHCCSEEEEESBC-HH-------------HHHHHHHHHHTSSSCCSEECCCCTTEEEEECSS
T ss_pred EEeCCCCHHHHHHHHHhcCCCEEEEEcCC-HH-------------HHHHHHHHHHHcCCCcceEEECCCCCEEEEeCC
Confidence 34569999999999999999999999953 22 134456666664432 37889999999999653
No 73
>2i7t_A Cleavage and polyadenylation specificity factor 73 kDa subunit; metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination; 2.10A {Homo sapiens} SCOP: d.157.1.10 PDB: 2i7v_A
Probab=77.72 E-value=2.4 Score=41.15 Aligned_cols=60 Identities=12% Similarity=0.249 Sum_probs=43.4
Q ss_pred ceeccCHHHHHHHHHHcCCCEEEEeccCCccccccccccccccCCHHHHHHHHHhc-C---C-CCeEeccCCCCeEEcC
Q 018490 276 FTLVSGQEDAVKLAKLLHAKFIVPMKNGDLDSKGFLASIIQSEGTVESFKELLSKE-L---P-DAQLLEPTPGEPLEIP 349 (355)
Q Consensus 276 ~~~h~~~~ea~~~~~~l~~k~~ip~H~~~f~~~g~l~~~~~~~~~~~~~~~~~~~~-~---~-~~~~~~p~~Ge~~~l~ 349 (355)
+.-|.+.+|..+.++.++|+.++++|-..- ..++|++.+++. + . +.++.+|+.||++++.
T Consensus 393 ~S~Had~~~l~~~i~~~~p~~v~~vHGe~~--------------~~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~~~ 457 (459)
T 2i7t_A 393 FSAHTDYQQTSEFIRALKPPHVILVHGEQN--------------EMARLKAALIREYEDNDEVHIEVHNPRNTEAVTLN 457 (459)
T ss_dssp CSCCCCHHHHHHHHHHHCCSEEEEESSCHH--------------HHHHHHHHHHHHHSSCTTCCCEEECCCTTCCEEEE
T ss_pred ecccCCHHHHHHHHHhcCCCeEEEeCCCHH--------------HHHHHHHHHHHHhccccccCceEEeCCCCCEEEEE
Confidence 345999999999999999999999995421 123344433331 1 1 4889999999999873
No 74
>3af5_A Putative uncharacterized protein PH1404; archaeal CPSF, beta-CAsp family, KH domain, ribonuclease, ME beta-lactamase superfamily, archaea; 2.60A {Pyrococcus horikoshii} PDB: 3af6_A*
Probab=74.09 E-value=3.4 Score=42.27 Aligned_cols=58 Identities=5% Similarity=0.131 Sum_probs=44.4
Q ss_pred ceeccCHHHHHHHHHHcC--CCEEEEeccCCccccccccccccccCCHHHHHHHHHhcCCCCeEeccCCCCeEEc
Q 018490 276 FTLVSGQEDAVKLAKLLH--AKFIVPMKNGDLDSKGFLASIIQSEGTVESFKELLSKELPDAQLLEPTPGEPLEI 348 (355)
Q Consensus 276 ~~~h~~~~ea~~~~~~l~--~k~~ip~H~~~f~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~Ge~~~l 348 (355)
+..|.+.+|..+.++.++ |+.++|+|-. .. ..+.+++.+++. .++++.+|+.||++++
T Consensus 591 ~SgHad~~eL~~~i~~~~~~P~~vi~vHGe-~~-------------~~~~la~~~~~~-~g~~~~~p~~g~~~~l 650 (651)
T 3af5_A 591 FSGHADRRELMNYVAKVRPRPERIITVHGE-PQ-------------KCLDLATSIHRK-FGISTRAPNNLDTIRL 650 (651)
T ss_dssp GCSSCCHHHHHHHHHHCBSCCSEEEEESSC-HH-------------HHHHHHHHHHHH-HCCEEECCCTTCEEEC
T ss_pred ccCcCCHHHHHHHHHHhhcCCCEEEEEcCC-HH-------------HHHHHHHHHHHh-cCCeEEECCCCCEEEe
Confidence 446999999999999999 9999999943 21 144566666432 2578999999999986
No 75
>2ycb_A Beta-CAsp RNAse, cleavage and polyadenylation specificity factor; hydrolase, KH, metallo-beta-lactamase; 3.10A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=73.93 E-value=3.2 Score=42.32 Aligned_cols=58 Identities=12% Similarity=0.086 Sum_probs=44.6
Q ss_pred ceeccCHHHHHHHHHHcC--CCEEEEeccCCccccccccccccccCCHHHHHHHHHhcCCCCeEeccCCCCeEEc
Q 018490 276 FTLVSGQEDAVKLAKLLH--AKFIVPMKNGDLDSKGFLASIIQSEGTVESFKELLSKELPDAQLLEPTPGEPLEI 348 (355)
Q Consensus 276 ~~~h~~~~ea~~~~~~l~--~k~~ip~H~~~f~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~Ge~~~l 348 (355)
+..|.+.+|..++++.++ |++++|+|-. .. ..+.+++.+++. .++++.+|+.||++++
T Consensus 576 ~SgHad~~eL~~~i~~~~~~Pk~vi~vHGe-~~-------------~~~~~a~~~~~~-~g~~~~~p~~g~~~~l 635 (636)
T 2ycb_A 576 FSGHSDRRQLMEYVKRISPKPEKILLCHGD-NY-------------KTLDLASSIYRT-YRIETKTPLNLETVRI 635 (636)
T ss_dssp CCSSCCHHHHHHHHHSCSSCCSEEEEESSC-HH-------------HHHHHHHHHHHH-HCCEEECCCTTCEEEC
T ss_pred cceeCCHHHHHHHHHHhccCCCEEEEECCC-HH-------------HHHHHHHHHHHH-cCCcEEeCCCCCEEEe
Confidence 456999999999999999 9999999943 22 145566666432 2578999999999986
No 76
>3zq4_A Ribonuclease J 1, RNAse J1; hydrolase, RNA maturation; 3.00A {Bacillus subtilis}
Probab=73.82 E-value=2.7 Score=42.18 Aligned_cols=62 Identities=18% Similarity=0.243 Sum_probs=46.1
Q ss_pred CceeccCHHHHHHHHHHcCCCEEEEeccCCccccccccccccccCCHHHHHHHHHhcCCC-CeEeccCCCCeEEcCC
Q 018490 275 KFTLVSGQEDAVKLAKLLHAKFIVPMKNGDLDSKGFLASIIQSEGTVESFKELLSKELPD-AQLLEPTPGEPLEIPA 350 (355)
Q Consensus 275 ~~~~h~~~~ea~~~~~~l~~k~~ip~H~~~f~~~g~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~Ge~~~l~~ 350 (355)
.+..|-+.+|..++++.++||+++|+|-. +. | ...+++.+++.|.. .+++.|+.|+.+++..
T Consensus 364 h~SgHa~~~eL~~~~~~~~Pk~~ipvHGe-~~-------~------~~~~~~~a~~~G~~~~~~~~~~nG~~~~l~~ 426 (555)
T 3zq4_A 364 HTSGHGGQEEQKLMLRLIKPKFFMPIHGE-YR-------M------QKMHVKLATDCGIPEENCFIMDNGEVLALKG 426 (555)
T ss_dssp CCCSSCCHHHHHHHHHHSCEEEEEEESBC-HH-------H------HHHHHHHHHHTTCCGGGBCCCCTTCEEEEET
T ss_pred EEeCCCCHHHHHHHHHHhCCCEEEEcCCC-HH-------H------HHHHHHHHHHcCCCcccEEEccCCCEEEEeC
Confidence 34468999999999999999999999954 32 2 33445556664432 3688899999999864
No 77
>2xr1_A Cleavage and polyadenylation specificity factor 1 subunit; hydrolase, metallo-beta-lactamase, beta-CAsp, RNA processing; 2.59A {Methanosarcina mazei}
Probab=71.84 E-value=3.7 Score=41.91 Aligned_cols=58 Identities=10% Similarity=0.087 Sum_probs=44.8
Q ss_pred ceeccCHHHHHHHHHHcC--CCEEEEeccCCccccccccccccccCCHHHHHHHHHhcCCCCeEeccCCCCeEEc
Q 018490 276 FTLVSGQEDAVKLAKLLH--AKFIVPMKNGDLDSKGFLASIIQSEGTVESFKELLSKELPDAQLLEPTPGEPLEI 348 (355)
Q Consensus 276 ~~~h~~~~ea~~~~~~l~--~k~~ip~H~~~f~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~Ge~~~l 348 (355)
+..|.+.+|..+.++.++ |+.++++|-. .. ..+.+++.+++. .++++.+|+.||++.+
T Consensus 580 ~SgHad~~eL~~~i~~~~~~P~~vi~vHGe-~~-------------~~~~~a~~~~~~-~g~~~~~p~~g~~~~l 639 (640)
T 2xr1_A 580 FSGHSDRRQLMEYVKRMQPRPERVFTEHGD-EK-------------ACVDLASSVYKK-LKIETRALTNLETVRL 639 (640)
T ss_dssp CSCSCCHHHHHHHHHTCBSCCSEEEEESSC-HH-------------HHHHHHHHHHHH-HCCEEEECCTTCEEEC
T ss_pred ccccCCHHHHHHHHHHhccCCCEEEEECCC-HH-------------HHHHHHHHHHHH-cCCeEEeCCCCCEEEe
Confidence 456999999999999998 9999999943 22 245566666432 2578999999999986
No 78
>2az4_A Hypothetical protein EF2904; structural genomics, PSI, protein STR initiative, midwest center for structural genomics, MCSG, U function; 2.00A {Enterococcus faecalis} SCOP: d.157.1.10
Probab=70.30 E-value=6.9 Score=37.34 Aligned_cols=51 Identities=20% Similarity=0.257 Sum_probs=38.7
Q ss_pred ceeccCHHHHHHHHHHcCCCEEEEeccCCccccccccccccccCCHHHHHHHHHhcCCCCeEeccCCCCeEEc
Q 018490 276 FTLVSGQEDAVKLAKLLHAKFIVPMKNGDLDSKGFLASIIQSEGTVESFKELLSKELPDAQLLEPTPGEPLEI 348 (355)
Q Consensus 276 ~~~h~~~~ea~~~~~~l~~k~~ip~H~~~f~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~Ge~~~l 348 (355)
+..|-+.+|..+.++.++||+++|+|-.. . ++ .. . .+.+++.|+.|+.++|
T Consensus 379 ~SgHa~~~eL~~~~~~~~Pk~~ipvHGe~-~-------~~--~~----------~--~~~~~~~~~~g~~~~l 429 (429)
T 2az4_A 379 CSGHAIPEDLDKIIALIEPQVLVPIHTLK-P-------EK--LE----------N--PYGERILPERGEQIVL 429 (429)
T ss_dssp CCSSCCHHHHHHHHHHHCCSEEEEESCSC-G-------GG--CC----------C--TTSEECCCCTTCEEEC
T ss_pred ecCCCCHHHHHHHHHhhCCCEEEECCCCc-h-------hh--hh----------c--CCCcEEEeCCCcEEeC
Confidence 34588999999999999999999999643 2 11 11 1 3467888999999875
No 79
>3iek_A Ribonuclease TTHA0252; metallo beta lactamase fold, endonuclease, hydrolase, metal- nuclease, RNA-binding, rRNA processing; HET: FLC; 2.05A {Thermus thermophilus} SCOP: d.157.1.10 PDB: 2dkf_A* 3iel_A* 3iem_A* 2zdf_A* 3idz_A* 2zdd_A* 3ie0_A* 2zde_A* 3ie1_A* 2zdw_A* 3a4y_A* 2yvd_A* 3ie2_A*
Probab=49.49 E-value=18 Score=34.73 Aligned_cols=55 Identities=15% Similarity=0.172 Sum_probs=42.6
Q ss_pred ceeccCHHHHHHHHHHcCCCEEEEeccCCccccccccccccccCCHHHHHHHHHhcCCCCeEeccCCCCeEEc
Q 018490 276 FTLVSGQEDAVKLAKLLHAKFIVPMKNGDLDSKGFLASIIQSEGTVESFKELLSKELPDAQLLEPTPGEPLEI 348 (355)
Q Consensus 276 ~~~h~~~~ea~~~~~~l~~k~~ip~H~~~f~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~Ge~~~l 348 (355)
+..|.+.+|.++.++.++ .++.+|-.. +..+.|++.+++.+. ++..|+.||++++
T Consensus 377 ~saHad~~~l~~~~~~~~--~v~lvHge~--------------~~~~~l~~~l~~~~~--~~~~p~~~~~~~~ 431 (431)
T 3iek_A 377 FSGHAGQDELLDWLQGEP--RVVLVHGEE--------------EKLLALGKLLALRGQ--EVSLARFGEGVPV 431 (431)
T ss_dssp GCSSCCHHHHHHHHTTCS--EEEEESSCH--------------HHHHHHHHHHHHTTC--EEEECCTTCCEEC
T ss_pred ccccCCHHHHHHHHHhCC--eEEEECCCH--------------HHHHHHHHHHHHhCC--cEEECCCCCEEeC
Confidence 456999999999998775 788999542 236677887777543 8889999999875
No 80
>3zdk_A 5' exonuclease apollo; hydrolase; HET: TLA; 2.16A {Homo sapiens}
Probab=44.39 E-value=13 Score=34.47 Aligned_cols=29 Identities=14% Similarity=0.039 Sum_probs=25.7
Q ss_pred eccCHHHHHHHHHHcCCCEEEEeccCCcc
Q 018490 278 LVSGQEDAVKLAKLLHAKFIVPMKNGDLD 306 (355)
Q Consensus 278 ~h~~~~ea~~~~~~l~~k~~ip~H~~~f~ 306 (355)
-|.+.+|..++++.++|+.++|+|.|.+.
T Consensus 276 ~Ha~~~EL~~~~~~~~P~~~iPvh~ge~~ 304 (336)
T 3zdk_A 276 DHSSYSELRAFVAALKPCQVVPIVSRRPC 304 (336)
T ss_dssp SSCBHHHHHHHHHHHCCSCEEESCTTSCC
T ss_pred CCCCHHHHHHHHHHhCCCEEEEEECCcCc
Confidence 38899999999999999999999966654
No 81
>4b87_A DNA cross-LINK repair 1A protein; dclre1A, DCLRE, interstrand crosslink repair, hydrolase, NIT mustard, cancer, chemotherapy, PSO2 homolog,; HET: DNA; 2.16A {Homo sapiens}
Probab=24.60 E-value=48 Score=31.05 Aligned_cols=26 Identities=19% Similarity=0.197 Sum_probs=24.3
Q ss_pred eccCHHHHHHHHHHcCCCEEEEeccC
Q 018490 278 LVSGQEDAVKLAKLLHAKFIVPMKNG 303 (355)
Q Consensus 278 ~h~~~~ea~~~~~~l~~k~~ip~H~~ 303 (355)
-|.+..|..+++..|+|+.+||+|..
T Consensus 320 eHss~~EL~~fv~~l~p~~iiptv~~ 345 (367)
T 4b87_A 320 EHSSYLEMKRFVQWLKPQKIIPTVNV 345 (367)
T ss_dssp SSCCHHHHHHHHHHHCCSEEEECSSC
T ss_pred CCCCHHHHHHHHHhcCCCeEECeecC
Confidence 48999999999999999999999975
No 82
>3kf6_B Protein TEN1; OB fold, chromosomal protein, DNA-binding, nucleus, telomere; 1.65A {Schizosaccharomyces pombe} PDB: 3k0x_A
Probab=23.36 E-value=1.8e+02 Score=22.07 Aligned_cols=27 Identities=22% Similarity=0.081 Sum_probs=19.2
Q ss_pred CCceEEEEec------CcEEEEEeCCeEEEEcc
Q 018490 76 TDVFKLTYLE------GNSWLWDLDGVKVLVDP 102 (355)
Q Consensus 76 ~~~~~itwlG------hss~li~~~g~~iLiDP 102 (355)
+.+.+++||| .+++.++..+.++.+|=
T Consensus 19 ~~G~KVRFLGCV~sY~tg~L~Le~~~~~v~VDV 51 (105)
T 3kf6_B 19 KDGQKLRFLGCVQSYKNGILRLIDGSSSVTCDV 51 (105)
T ss_dssp CTTCEEEEEEEEEEEETTEEEEEETTEEEEEEC
T ss_pred CCCCEEEEEEEeeeeccEEEEEccCCcEEEEEH
Confidence 4556899999 35666776677777774
Done!