BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018494
(355 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P73467|Y1223_SYNY3 Epimerase family protein slr1223 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=slr1223 PE=3 SV=2
Length = 307
Score = 241 bits (614), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 138/311 (44%), Positives = 186/311 (59%), Gaps = 13/311 (4%)
Query: 51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF-PGKKTRFFPGV-MIAEEP 108
M + +TGATGF+G LV L H++ +L RS SKA+ +F PG FP + IA E
Sbjct: 1 MKIILTGATGFVGCSLVPLLHQQGHELTLLVRSVSKAQRLFAPGS----FPQLKAIAYEA 56
Query: 109 ----QWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRP 164
W+ + G AV+NLAG PI RW+ K EI +SR T K+V+ I ++ +P
Sbjct: 57 TKSGDWQKVVDGQDAVINLAGEPISERWTEAYKAEIFDSRKLGTEKLVEAIAKADR--KP 114
Query: 165 SVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVCREWEGTALKVNK-DVRLALIRIGIV 223
V+ + T S VC+ WE A +V + VRL + RIGIV
Sbjct: 115 QVMISGSAIGYYGTSETATFTESSKPGDDFLAEVCQAWENAAHQVEQLGVRLVVFRIGIV 174
Query: 224 LGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAP 283
LG DGGALAKM+P F +FAGGPLGSG+QWFSWI D++ LI +AL++ + RG N TAP
Sbjct: 175 LGADGGALAKMLPPFKLFAGGPLGSGEQWFSWIDRRDLIALIDKALTDSTLRGTYNATAP 234
Query: 284 NPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKY 343
NPV++ E C LG VL RPSWLPVP+ AL+ +LGEGA +VLEGQ V+P + F F+
Sbjct: 235 NPVKMKEFCHTLGKVLARPSWLPVPDIALELLLGEGAKLVLEGQEVLPGAISKTDFQFQA 294
Query: 344 RYVKDALKAIM 354
++ +L+ I+
Sbjct: 295 PDLETSLRQIL 305
>sp|P77775|YFCH_ECOLI Epimerase family protein YfcH OS=Escherichia coli (strain K12)
GN=yfcH PE=3 SV=1
Length = 297
Score = 190 bits (482), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 116/306 (37%), Positives = 172/306 (56%), Gaps = 12/306 (3%)
Query: 51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 110
M + +TG TG IGR L+ RL HQ+ V+TR+ KA + G + + G +A++
Sbjct: 1 MNIVITGGTGLIGRHLIPRLLELGHQITVVTRNPQKASSVL-GPRVTLWQG--LADQSN- 56
Query: 111 RDCIQGSTAVVNLAGTPIGT-RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLEL 169
+ G AV+NLAG PI RW+ E K+ + +SR +T K+VDLIN S PSVL
Sbjct: 57 ---LNGVDAVINLAGEPIADKRWTHEQKERLCQSRWNITQKLVDLINAS--DTPPSVLIS 111
Query: 170 VKPKYLMRAAHQEMITWLSDYCAKVYCLVCREWEGTALKVNKD-VRLALIRIGIVLGKDG 228
+ ++T + +C WE A + D R+ L+R G+VL DG
Sbjct: 112 GSATGYYGDLGEVVVTEEEPPHNEFTHKLCARWEEIACRAQSDKTRVCLLRTGVVLAPDG 171
Query: 229 GALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRL 288
G L KM+P F + GGP+GSG+Q+ +WIH+DD+VN I L N RG N +P PVR
Sbjct: 172 GILGKMLPPFRLGLGGPIGSGRQYLAWIHIDDMVNGILWLLDN-ELRGPFNMVSPYPVRN 230
Query: 289 AEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKD 348
+ LG+ L RP+ L VP A++ ++GE + +VL GQR +P R +E GF F++ +++
Sbjct: 231 EQFAHALGHALHRPAILRVPATAIRLLMGESSVLVLGGQRALPKRLEEAGFAFRWYDLEE 290
Query: 349 ALKAIM 354
AL ++
Sbjct: 291 ALADVV 296
>sp|P71373|Y1208_HAEIN Epimerase family protein HI_1208 OS=Haemophilus influenzae (strain
ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_1208 PE=3 SV=1
Length = 296
Score = 157 bits (397), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 107/313 (34%), Positives = 163/313 (52%), Gaps = 31/313 (9%)
Query: 51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 110
M + +TG TG IG+ LV+RL N QV +LTRS S L K +F + +
Sbjct: 1 MNILLTGGTGLIGKALVERLCLRNEQVTILTRSSSPHTLS-KHKNIKFITALSQLNSQEQ 59
Query: 111 RDCIQGSTAVVNLAGTPIGTR-WSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLEL 169
D A++NLAG PI + WS K ++ESR+ +T+++V+ IN+ +
Sbjct: 60 FD------AIINLAGEPIFHKVWSKNQKSILRESRLSLTTQLVEFINQYQQ--------- 104
Query: 170 VKPKYLMRAA-------HQEMITWLSDYCAKVYCLVCREWEGTALKVNKDVRLALIRIGI 222
P ++ +A ++ IT S +C++WE A + N R+ LIR G+
Sbjct: 105 -HPIFISGSATGIYGDQDEQKITETSKTAKTFTAQLCQDWENIAQQANG--RVCLIRTGM 161
Query: 223 VLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTA 282
V GGALAK++P + GG LG G+Q+F WI L+D+VN I L + RG N A
Sbjct: 162 VFSTKGGALAKILPFYKWGLGGKLGKGEQYFPWIALEDMVNGILFLLDHSECRGAFNFAA 221
Query: 283 PNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFK 342
P ++ + L +L RP++ +P++ L +LGE A ++LE Q VVP + GF F+
Sbjct: 222 PKSIKQHKFNRTLAQLLKRPAFATIPKWLLHFILGERANLLLESQNVVPEKLLNAGFQFQ 281
Query: 343 Y----RYVKDALK 351
Y Y++D LK
Sbjct: 282 YADCENYLEDILK 294
>sp|O31574|YFHF_BACSU Epimerase family protein YfhF OS=Bacillus subtilis (strain 168)
GN=yfhF PE=3 SV=1
Length = 303
Score = 155 bits (392), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 101/319 (31%), Positives = 156/319 (48%), Gaps = 35/319 (10%)
Query: 51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 110
M +++TG TGF+G+ L L H V +L+R+ + E K + + P+
Sbjct: 1 MNIAMTGGTGFLGQHLTGVLTRQGHHVYILSRNARETEQ----KNMTYVQWLSEGAAPE- 55
Query: 111 RDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELV 170
+ +NLAG I RW+ + K+ I SRI T +V LI + E
Sbjct: 56 -QELPHIDVWINLAGKSIFGRWTEKTKQHILSSRINATREVQRLIQKQKE---------- 104
Query: 171 KPKYLMRAA-------------HQEMITWLSDYCAKVYCLVCREWEGTALKVNK-DVRLA 216
KPK L++A+ ++ T D+ + L WE + +R
Sbjct: 105 KPKTLIQASAVGIYGTSLEKTFTEDSATSDEDFLSHTAHL----WEKEGQHIEAMGIRTV 160
Query: 217 LIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRG 276
R G++LG+ G AL MI + AGG +G+G+QW SWIH++D +I A+ N G
Sbjct: 161 YARFGVMLGEKG-ALPLMILPYKFLAGGTIGTGRQWLSWIHVEDAAQMIRYAVENAGISG 219
Query: 277 VINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKE 336
+N TAPNPV + + + V RP WLPVPEF L LGE + ++++GQR +P +A
Sbjct: 220 PMNVTAPNPVDMKQFGKTIARVKHRPHWLPVPEFFLSKALGEMSLLIVKGQRALPKKAIT 279
Query: 337 LGFPFKYRYVKDALKAIMS 355
GF F Y ++ AL +++
Sbjct: 280 SGFRFTYSDLEFALSQLIA 298
>sp|Q5M8N4|D39U1_MOUSE Epimerase family protein SDR39U1 OS=Mus musculus GN=Sdr39u1 PE=1
SV=1
Length = 308
Score = 152 bits (383), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 98/313 (31%), Positives = 158/313 (50%), Gaps = 28/313 (8%)
Query: 51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 110
M V V G TGFIG + Q L+ H+V++++R PG+ T W
Sbjct: 1 MRVLVGGGTGFIGTAVTQLLRGRGHEVKLVSRQPG------PGRIT-------------W 41
Query: 111 RDCIQGS----TAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINESPEGVR 163
+ + V+NLAG I RW+ +KE+ SR+ T + I E+ +
Sbjct: 42 SELSESGLPLCDVVINLAGENILNPLRRWNETFQKEVLTSRLDTTHLLAKAITETAHPPQ 101
Query: 164 PSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVCREWEGTALKVNKDVRLALIRIGIV 223
+L + Y + +E + + +WE A + R ++R G+V
Sbjct: 102 AWIL-VTGVAYYQPSLTKEYDEDSPGGNFDFFSNLVTKWEAAARLPGESTRQVVVRSGVV 160
Query: 224 LGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAP 283
LG+ GGA++ M+ F + GGP+GSG+Q+F WIH+ D+ ++ AL +GV+NG AP
Sbjct: 161 LGRGGGAISHMLLPFRLGLGGPIGSGRQFFPWIHIGDLAGILNYALEANHVQGVLNGVAP 220
Query: 284 -NPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFK 342
+ AE LG LGRP+++PVP ++AV GE A ++LEGQ+VVP R G+ +
Sbjct: 221 ASTTTNAEFAQALGAALGRPAFIPVPSTVVRAVFGERAIMLLEGQKVVPRRTLATGYQYS 280
Query: 343 YRYVKDALKAIMS 355
+ ++ ALK +++
Sbjct: 281 FPELRAALKDVVA 293
>sp|Q17QH8|D39U1_BOVIN Epimerase family protein SDR39U1 OS=Bos taurus GN=SDR39U1 PE=2 SV=1
Length = 294
Score = 150 bits (379), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/315 (32%), Positives = 157/315 (49%), Gaps = 31/315 (9%)
Query: 51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 110
M V V G TGFIG L Q L+A H+V +++R + + T P
Sbjct: 1 MRVLVGGGTGFIGTALTQLLKARGHEVTLISRKPGPDRITWDDLTTSGLP---------- 50
Query: 111 RDCIQGSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVL 167
C A VNLAG I RW++ +KE+ SR+ T + I ++P+ P
Sbjct: 51 -RC----DAAVNLAGENILNPLRRWNAAFQKEVLSSRLETTQTLARAIAKAPQ--PPQAW 103
Query: 168 ELVKPKYLMRAAHQEMITWLSDYCA-----KVYCLVCREWEGTALKVNKDVRLALIRIGI 222
LV A +Q +T D + + + +WE A R ++R G+
Sbjct: 104 VLVTGV----AYYQPSLTAEYDEDSPGGDFDFFSNLVTKWEAAARLPGDSTRQVVVRSGV 159
Query: 223 VLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTA 282
VLG+ GGA+ M+ F + GGP+GSG Q+F WIH+ D+ ++ AL +G++NG A
Sbjct: 160 VLGRGGGAIGHMLLPFRLGLGGPIGSGHQFFPWIHIRDLAGILAHALETSHVQGILNGVA 219
Query: 283 P-NPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLG-EGAFVVLEGQRVVPARAKELGFP 340
P + AE LG LGRP+++P+P ++AV G E A ++LEGQ+VVP R G+
Sbjct: 220 PASSTTNAEFARALGTALGRPAFIPLPSAVVQAVFGRERAVMLLEGQKVVPRRTLAAGYR 279
Query: 341 FKYRYVKDALKAIMS 355
+ + + ALK +++
Sbjct: 280 YSFPELGAALKEVIA 294
>sp|Q4L4J7|Y2119_STAHJ Epimerase family protein SH2119 OS=Staphylococcus haemolyticus
(strain JCSC1435) GN=SH2119 PE=3 SV=1
Length = 299
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/307 (31%), Positives = 149/307 (48%), Gaps = 20/307 (6%)
Query: 55 VTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAE--EPQWRD 112
+TG TG +G +LV +L+ + + +LTRS +++ P + + W
Sbjct: 6 ITGGTGMVGSQLVNKLKNRDVHITILTRSDKQSDD----------PKISYVNWSKDGWMS 55
Query: 113 CIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINE---SPEGVRPSVLEL 169
+ VVNLAG + RW+ K+ I SRI+ T +VDL ++ PE + +
Sbjct: 56 QVPDIDVVVNLAGATLNKRWTPSYKQLIMTSRIQSTQSLVDLFSQREHKPEVLFNASAMG 115
Query: 170 VKPKYLMRAAHQEMITWLSDYCAKVYCLVCREWEGTALKVNK-DVRLALIRIGIVLGKDG 228
P L ++ T D+ + V +WE A + R+ L R ++L DG
Sbjct: 116 YYPPSLYHTYTEKYQTHPFDFLSDV----VYQWERFAKRFESFGTRVVLGRFSMILSNDG 171
Query: 229 GALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRL 288
GAL M + F GG LGSG QW+SWIH++D+V I + NP+ +G N AP R
Sbjct: 172 GALQTMKLPYKFFVGGKLGSGFQWYSWIHINDLVRAILFTIDNPNAKGPFNMAAPIAERQ 231
Query: 289 AEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKD 348
L V+ RP VP F ++ LGE + VVL+ Q+V+P + LGF F Y +K
Sbjct: 232 NLFGYTLARVMHRPHETWVPSFLMRLALGEMSTVVLDTQKVLPNKLDALGFTFNYSNLKI 291
Query: 349 ALKAIMS 355
A + ++
Sbjct: 292 AFEDLID 298
>sp|Q6GIM1|Y825_STAAR Epimerase family protein SAR0825 OS=Staphylococcus aureus (strain
MRSA252) GN=SAR0825 PE=3 SV=1
Length = 300
Score = 150 bits (378), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/305 (31%), Positives = 157/305 (51%), Gaps = 15/305 (4%)
Query: 55 VTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI 114
+TG TG +G +LV ++ + + +LTR + I KK + V A+
Sbjct: 6 ITGGTGMVGSQLVNEIKKSDSHITILTRH----DQISNNKKISY---VNWAKSGWEHKVP 58
Query: 115 QGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLI---NESPEGVRPSVLELVK 171
Q V+NLAG + RW+ E K+ + SRI+ T + +L N++P+ + +
Sbjct: 59 QNIDVVINLAGATLNKRWTPEYKQTLMLSRIQSTQALYELFKSRNKAPKVLFNASATGYY 118
Query: 172 PKYLMRAAHQEMITWLSDYCAKVYCLVCREWEGTALKVNK-DVRLALIRIGIVLGKDGGA 230
P L + + T D+ + + +WE A + + R+ + R GI+L +GGA
Sbjct: 119 PPDLFMSYTEVYKTLPFDFLSDI----VYQWERFAQQFEQLGTRVVIGRFGIILSNEGGA 174
Query: 231 LAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAE 290
L M + + GG LGSGQQW+SWIH++D++ I ++N S G N TAP P R
Sbjct: 175 LQTMKLPYEYYIGGKLGSGQQWYSWIHINDLIQAILFLINNESASGPFNLTAPIPERQNL 234
Query: 291 MCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDAL 350
L + +P VP A++ +LG+ + VVL+ Q+V+P + + LGF FKY +K AL
Sbjct: 235 FGYTLARAMHKPHETWVPSLAMRLILGQMSTVVLDTQKVLPNKIQALGFQFKYSNLKMAL 294
Query: 351 KAIMS 355
+ ++S
Sbjct: 295 EDLIS 299
>sp|Q2YSF6|Y724_STAAB Epimerase family protein SAB0724c OS=Staphylococcus aureus (strain
bovine RF122 / ET3-1) GN=SAB0724c PE=3 SV=1
Length = 300
Score = 148 bits (373), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 156/305 (51%), Gaps = 15/305 (4%)
Query: 55 VTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI 114
+TG TG +G +LV ++ + + +LTR + I KK + V A+
Sbjct: 6 ITGGTGMVGSQLVNEIKKSDSHITILTRH----DQISNDKKISY---VNWAKSGWEHKVP 58
Query: 115 QGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLI---NESPEGVRPSVLELVK 171
Q V+NLAG + RW+ E K+ + SRI+ T + +L N++P+ + +
Sbjct: 59 QNIDVVINLAGATLNKRWTPEYKQTLMLSRIQSTQALYELFKSRNKAPKVLFNASATGYY 118
Query: 172 PKYLMRAAHQEMITWLSDYCAKVYCLVCREWEGTALKVNK-DVRLALIRIGIVLGKDGGA 230
P L + + T D+ + + +WE A + + R+ + R GI+L +GGA
Sbjct: 119 PPDLFMSYTEVYKTLPFDFLSDI----VYQWERFAQQFEQLGTRVVIGRFGIILSNEGGA 174
Query: 231 LAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAE 290
L M + + GG LGSGQQW+SWIH++D++ I ++N S G N TAP P R
Sbjct: 175 LQTMKLPYEYYIGGKLGSGQQWYSWIHINDLIQAILFLINNESASGPFNLTAPIPERQNL 234
Query: 291 MCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDAL 350
L + +P P A++ +LG+ + VVL+ Q+V+P + + LGF FKY +K AL
Sbjct: 235 FGYTLARAMHKPHETWAPSLAMRLILGQMSTVVLDTQKVLPNKIQALGFQFKYSNLKIAL 294
Query: 351 KAIMS 355
+ ++S
Sbjct: 295 EDLIS 299
>sp|Q5HHP9|Y834_STAAC Epimerase family protein SACOL0834 OS=Staphylococcus aureus (strain
COL) GN=SACOL0834 PE=3 SV=1
Length = 300
Score = 147 bits (372), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 155/304 (50%), Gaps = 15/304 (4%)
Query: 55 VTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI 114
+TG TG +G +LV ++ + + +LTR + I KK + V A+
Sbjct: 6 ITGGTGMVGSQLVNEIKKSDSHITILTRH----DQISNDKKISY---VNWAKSGWEHKVP 58
Query: 115 QGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLI---NESPEGVRPSVLELVK 171
Q V+NLAG + RW+ E K+ + SRI+ T + +L N++P+ + +
Sbjct: 59 QNIDVVINLAGATLNKRWTPEYKQTLMLSRIQSTQALYELFKSRNKAPKALFNASATGYY 118
Query: 172 PKYLMRAAHQEMITWLSDYCAKVYCLVCREWEGTALKVNK-DVRLALIRIGIVLGKDGGA 230
P L + + T D+ + + +WE A + + R+ + R GI+L +GGA
Sbjct: 119 PPDLFMSYTEVYKTLPFDFLSDI----VYQWERFAQQFEQLGTRVVIGRFGIILSNEGGA 174
Query: 231 LAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAE 290
L M + + GG LGSGQQW+SWIH++D++ I ++N S G N TAP P R
Sbjct: 175 LQTMKLPYEYYIGGKLGSGQQWYSWIHINDLIQAILFLINNESASGPFNLTAPIPERQNL 234
Query: 291 MCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDAL 350
L + +P P A++ +LG+ + VVL+ Q+V+P + + LGF FKY +K AL
Sbjct: 235 FGYTLARAMHKPHETWAPSLAMRLILGQMSTVVLDTQKVLPNKIQALGFQFKYSNLKMAL 294
Query: 351 KAIM 354
+ ++
Sbjct: 295 EDLI 298
>sp|Q2G035|Y792_STAA8 Epimerase family protein SAOUHSC_00792 OS=Staphylococcus aureus
(strain NCTC 8325) GN=SAOUHSC_00792 PE=3 SV=1
Length = 300
Score = 147 bits (372), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 155/304 (50%), Gaps = 15/304 (4%)
Query: 55 VTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI 114
+TG TG +G +LV ++ + + +LTR + I KK + V A+
Sbjct: 6 ITGGTGMVGSQLVNEIKKSDSHITILTRH----DQISNDKKISY---VNWAKSGWEHKVP 58
Query: 115 QGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLI---NESPEGVRPSVLELVK 171
Q V+NLAG + RW+ E K+ + SRI+ T + +L N++P+ + +
Sbjct: 59 QNIDVVINLAGATLNKRWTPEYKQTLMLSRIQSTQALYELFKSRNKAPKALFNASATGYY 118
Query: 172 PKYLMRAAHQEMITWLSDYCAKVYCLVCREWEGTALKVNK-DVRLALIRIGIVLGKDGGA 230
P L + + T D+ + + +WE A + + R+ + R GI+L +GGA
Sbjct: 119 PPDLFMSYTEVYKTLPFDFLSDI----VYQWERFAQQFEQLGTRVVIGRFGIILSNEGGA 174
Query: 231 LAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAE 290
L M + + GG LGSGQQW+SWIH++D++ I ++N S G N TAP P R
Sbjct: 175 LQTMKLPYEYYIGGKLGSGQQWYSWIHINDLIQAILFLINNESASGPFNLTAPIPERQNL 234
Query: 291 MCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDAL 350
L + +P P A++ +LG+ + VVL+ Q+V+P + + LGF FKY +K AL
Sbjct: 235 FGYTLARAMHKPHETWAPSLAMRLILGQMSTVVLDTQKVLPNKIQALGFQFKYSNLKMAL 294
Query: 351 KAIM 354
+ ++
Sbjct: 295 EDLI 298
>sp|Q2FIM4|Y753_STAA3 Epimerase family protein SAUSA300_0753 OS=Staphylococcus aureus
(strain USA300) GN=SAUSA300_0753 PE=3 SV=1
Length = 300
Score = 147 bits (372), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 155/304 (50%), Gaps = 15/304 (4%)
Query: 55 VTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI 114
+TG TG +G +LV ++ + + +LTR + I KK + V A+
Sbjct: 6 ITGGTGMVGSQLVNEIKKSDSHITILTRH----DQISNDKKISY---VNWAKSGWEHKVP 58
Query: 115 QGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLI---NESPEGVRPSVLELVK 171
Q V+NLAG + RW+ E K+ + SRI+ T + +L N++P+ + +
Sbjct: 59 QNIDVVINLAGATLNKRWTPEYKQTLMLSRIQSTQALYELFKSRNKAPKALFNASATGYY 118
Query: 172 PKYLMRAAHQEMITWLSDYCAKVYCLVCREWEGTALKVNK-DVRLALIRIGIVLGKDGGA 230
P L + + T D+ + + +WE A + + R+ + R GI+L +GGA
Sbjct: 119 PPDLFMSYTEVYKTLPFDFLSDI----VYQWERFAQQFEQLGTRVVIGRFGIILSNEGGA 174
Query: 231 LAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAE 290
L M + + GG LGSGQQW+SWIH++D++ I ++N S G N TAP P R
Sbjct: 175 LQTMKLPYEYYIGGKLGSGQQWYSWIHINDLIQAILFLINNESASGPFNLTAPIPERQNL 234
Query: 291 MCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDAL 350
L + +P P A++ +LG+ + VVL+ Q+V+P + + LGF FKY +K AL
Sbjct: 235 FGYTLARAMHKPHETWAPSLAMRLILGQMSTVVLDTQKVLPNKIQALGFQFKYSNLKMAL 294
Query: 351 KAIM 354
+ ++
Sbjct: 295 EDLI 298
>sp|Q49VZ4|Y1921_STAS1 Epimerase family protein SSP1921 OS=Staphylococcus saprophyticus
subsp. saprophyticus (strain ATCC 15305 / DSM 20229)
GN=SSP1921 PE=3 SV=1
Length = 298
Score = 147 bits (370), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/311 (32%), Positives = 153/311 (49%), Gaps = 30/311 (9%)
Query: 55 VTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAE--EPQWRD 112
+TG TG IG +LV+ + + + +LTR T P + +P W +
Sbjct: 6 ITGGTGMIGSQLVKAIIQSDAHITILTRQ----------DMTSSHPKISYVNWSQPNWEN 55
Query: 113 CIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLIN---ESPEGV-RPSVLE 168
I V+NLAG + RW+ K+ I SRI+ T + +L PE + S +
Sbjct: 56 EIPDIDIVINLAGASLNKRWTKSYKQTIMLSRIQATQALFELFQNRKHKPEVLFNASAVG 115
Query: 169 LVKPKYLMRAAHQEMITWLSDYCAKVYCLVCREWEGTALKVNK-DVRLALIRIGIVLGKD 227
KP L R + T D+ ++V +WE A + R+ + R G+VL D
Sbjct: 116 YYKPD-LYRTYTELYKTLPFDFLSEV----VYQWERMARQFETLGTRVVIGRFGMVLSND 170
Query: 228 GGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVR 287
GGAL M + + GG LGSG+QW+SWIH+DD+V + ++ S RGV N TAP
Sbjct: 171 GGALPMMKLPYDFYLGGKLGSGRQWYSWIHIDDLVRALLHTINTESARGVFNFTAP---- 226
Query: 288 LAEMCDHLGNVLGRPSWLP----VPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKY 343
+ E + G L R S P VP A++ LG+ + VVL+ Q+V+P + + F FKY
Sbjct: 227 IVEHQNMFGYTLARVSHRPHHTWVPSLAIRLALGQMSTVVLDTQKVIPNKLQATHFKFKY 286
Query: 344 RYVKDALKAIM 354
+K AL+ ++
Sbjct: 287 PDLKIALEDLV 297
>sp|Q8CPY7|Y553_STAES Epimerase family protein SE_0553 OS=Staphylococcus epidermidis
(strain ATCC 12228) GN=SE_0553 PE=3 SV=1
Length = 299
Score = 145 bits (367), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 152/306 (49%), Gaps = 20/306 (6%)
Query: 55 VTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAE--EPQWRD 112
+TG TG +G LV ++ + + +LTR KT P + + W+
Sbjct: 6 ITGGTGMVGSHLVNEIKQTDAHITILTRQ----------DKTSNHPKITYINWSKEGWQH 55
Query: 113 CIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLIN---ESPEGVRPSVLEL 169
+ V+NLAG + RW+S K+ + SRI+ T + +L PE + +
Sbjct: 56 QVPDIDIVINLAGATLNKRWTSSHKQAMMLSRIQSTQTLFELFETREHKPEVLFNASAMG 115
Query: 170 VKPKYLMRAAHQEMITWLSDYCAKVYCLVCREWEGTALKVNK-DVRLALIRIGIVLGKDG 228
P L + + T D+ +++ +WE A K + R+ L R G++L DG
Sbjct: 116 YYPPDLFTSYTELYRTLPFDFLSEI----VYQWERFANKFKQFGTRVVLGRFGLILSDDG 171
Query: 229 GALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRL 288
GAL M + ++ GG LGSG+QW+SWIH+DD++ I +++ + G N TAP P R
Sbjct: 172 GALEMMELPYRLYVGGKLGSGRQWYSWIHIDDLIRGILFTINHDNAEGPFNLTAPIPERQ 231
Query: 289 AEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKD 348
L + +P P+ L+AVLG+ + V+L+ Q+V+P + LGF FKY +++
Sbjct: 232 NLFGYTLARAMHKPHETWAPKLILRAVLGQMSTVILDTQKVLPNKLHALGFEFKYNNLRN 291
Query: 349 ALKAIM 354
AL ++
Sbjct: 292 ALDDLI 297
>sp|Q5HQV8|Y438_STAEQ Epimerase family protein SERP0438 OS=Staphylococcus epidermidis
(strain ATCC 35984 / RP62A) GN=SERP0438 PE=3 SV=1
Length = 299
Score = 145 bits (367), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 152/306 (49%), Gaps = 20/306 (6%)
Query: 55 VTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAE--EPQWRD 112
+TG TG +G LV ++ + + +LTR KT P + + W+
Sbjct: 6 ITGGTGMVGSHLVNEIKQTDAHITILTRQ----------DKTSNHPKITYINWSKEGWQH 55
Query: 113 CIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLIN---ESPEGVRPSVLEL 169
+ V+NLAG + RW+S K+ + SRI+ T + +L PE + +
Sbjct: 56 QVPDIDIVINLAGATLNKRWTSSHKQAMMLSRIQSTQTLFELFETREHKPEVLFNASAMG 115
Query: 170 VKPKYLMRAAHQEMITWLSDYCAKVYCLVCREWEGTALKVNK-DVRLALIRIGIVLGKDG 228
P L + + T D+ +++ +WE A K + R+ L R G++L DG
Sbjct: 116 YYPPDLFTSYTELYRTLPFDFLSEI----VYQWERFANKFKQFGTRVVLGRFGLILSDDG 171
Query: 229 GALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRL 288
GAL M + ++ GG LGSG+QW+SWIH+DD++ I +++ + G N TAP P R
Sbjct: 172 GALEMMELPYRLYVGGKLGSGRQWYSWIHIDDLIRGILFTINHDNAEGPFNLTAPIPERQ 231
Query: 289 AEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKD 348
L + +P P+ L+AVLG+ + V+L+ Q+V+P + LGF FKY +++
Sbjct: 232 NLFGYTLARAMHKPHETWAPKLILRAVLGQMSTVILDTQKVLPNKLHALGFEFKYNNLRN 291
Query: 349 ALKAIM 354
AL ++
Sbjct: 292 ALDDLI 297
>sp|Q99VK8|Y769_STAAM Epimerase family protein SAV0769 OS=Staphylococcus aureus (strain
Mu50 / ATCC 700699) GN=SAV0769 PE=3 SV=1
Length = 300
Score = 145 bits (366), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 155/304 (50%), Gaps = 15/304 (4%)
Query: 55 VTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI 114
+TG TG +G +LV ++ + + +LTR + I KK + V A+
Sbjct: 6 ITGGTGMVGSQLVNEIKKSDSHITILTRH----DQISNDKKISY---VNWAKSGWEHKVP 58
Query: 115 QGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLI---NESPEGVRPSVLELVK 171
Q V+NLAG + RW+ E K+ + SRI+ T + +L N++P+ + +
Sbjct: 59 QNIDVVINLAGATLNKRWTPEYKQTLMLSRIQSTQALYELFKSRNKAPKVLFNASATGYY 118
Query: 172 PKYLMRAAHQEMITWLSDYCAKVYCLVCREWEGTALKVNK-DVRLALIRIGIVLGKDGGA 230
P L + + T D+ + + +WE A + + R+ + R G++L +GGA
Sbjct: 119 PPDLFMSYTEVYKTLPFDFLSDI----VYQWERFAQQFEQLGTRVVIGRFGMILSNEGGA 174
Query: 231 LAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAE 290
L M + + GG LGSGQQW+SWIH++D++ I ++N S G N TAP P R
Sbjct: 175 LQTMKLPYKYYIGGKLGSGQQWYSWIHINDLIQAILFLINNESASGPFNLTAPIPERQNL 234
Query: 291 MCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDAL 350
L + +P P A++ +LG+ + VVL+ Q+V+P + + LGF FKY +K AL
Sbjct: 235 FGYTLARAMHKPHETWAPSLAMRLILGQMSTVVLDTQKVLPNKIQALGFQFKYSNLKMAL 294
Query: 351 KAIM 354
+ ++
Sbjct: 295 EDLI 298
>sp|Q7A6Q5|Y724_STAAN Epimerase family protein SA0724 OS=Staphylococcus aureus (strain
N315) GN=SA0724 PE=1 SV=1
Length = 300
Score = 145 bits (366), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 155/304 (50%), Gaps = 15/304 (4%)
Query: 55 VTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI 114
+TG TG +G +LV ++ + + +LTR + I KK + V A+
Sbjct: 6 ITGGTGMVGSQLVNEIKKSDSHITILTRH----DQISNDKKISY---VNWAKSGWEHKVP 58
Query: 115 QGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLI---NESPEGVRPSVLELVK 171
Q V+NLAG + RW+ E K+ + SRI+ T + +L N++P+ + +
Sbjct: 59 QNIDVVINLAGATLNKRWTPEYKQTLMLSRIQSTQALYELFKSRNKAPKVLFNASATGYY 118
Query: 172 PKYLMRAAHQEMITWLSDYCAKVYCLVCREWEGTALKVNK-DVRLALIRIGIVLGKDGGA 230
P L + + T D+ + + +WE A + + R+ + R G++L +GGA
Sbjct: 119 PPDLFMSYTEVYKTLPFDFLSDI----VYQWERFAQQFEQLGTRVVIGRFGMILSNEGGA 174
Query: 231 LAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAE 290
L M + + GG LGSGQQW+SWIH++D++ I ++N S G N TAP P R
Sbjct: 175 LQTMKLPYKYYIGGKLGSGQQWYSWIHINDLIQAILFLINNESASGPFNLTAPIPERQNL 234
Query: 291 MCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDAL 350
L + +P P A++ +LG+ + VVL+ Q+V+P + + LGF FKY +K AL
Sbjct: 235 FGYTLARAMHKPHETWAPSLAMRLILGQMSTVVLDTQKVLPNKIQALGFQFKYSNLKMAL 294
Query: 351 KAIM 354
+ ++
Sbjct: 295 EDLI 298
>sp|Q6GB61|Y734_STAAS Epimerase family protein SAS0734 OS=Staphylococcus aureus (strain
MSSA476) GN=SAS0734 PE=3 SV=1
Length = 300
Score = 145 bits (365), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 155/304 (50%), Gaps = 15/304 (4%)
Query: 55 VTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI 114
+TG TG +G +LV ++ + + +LTR + I KK + V A+
Sbjct: 6 ITGGTGMVGSQLVNEIKKSDSHITILTRH----DQISNDKKISY---VNWAKSGWEHKVP 58
Query: 115 QGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLI---NESPEGVRPSVLELVK 171
Q V+NLAG + RW+ E K+ + SRI+ T + +L N++P+ + +
Sbjct: 59 QNIDVVINLAGATLNKRWTPEYKQTLMLSRIQSTQALYELFKSRNKAPKVLFNASATGYY 118
Query: 172 PKYLMRAAHQEMITWLSDYCAKVYCLVCREWEGTALKVNK-DVRLALIRIGIVLGKDGGA 230
P L + + T D+ + + +WE A + + R+ + R G++L +GGA
Sbjct: 119 PPDLFMSYTEVYKTLPFDFLSDI----VYQWERFAQQFEQLGTRVVIGRFGMILSNEGGA 174
Query: 231 LAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAE 290
L M + + GG LGSGQQW+SWIH++D++ I ++N S G N TAP P R
Sbjct: 175 LQTMKLPYKYYIGGRLGSGQQWYSWIHINDLIQAILFLINNESASGPFNLTAPIPERQNL 234
Query: 291 MCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDAL 350
L + +P P A++ +LG+ + VVL+ Q+V+P + + LGF FKY +K AL
Sbjct: 235 FGYTLARAMHKPHETWAPSLAMRLILGQMSTVVLDTQKVLPNKIQALGFQFKYSNLKMAL 294
Query: 351 KAIM 354
+ ++
Sbjct: 295 EDLI 298
>sp|Q8NXL7|Y731_STAAW Epimerase family protein MW0731 OS=Staphylococcus aureus (strain
MW2) GN=MW0731 PE=3 SV=1
Length = 300
Score = 145 bits (365), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 155/304 (50%), Gaps = 15/304 (4%)
Query: 55 VTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI 114
+TG TG +G +LV ++ + + +LTR + I KK + V A+
Sbjct: 6 ITGGTGMVGSQLVNEIKKSDSHITILTRH----DQISNDKKISY---VNWAKSGWEHKVP 58
Query: 115 QGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLI---NESPEGVRPSVLELVK 171
Q V+NLAG + RW+ E K+ + SRI+ T + +L N++P+ + +
Sbjct: 59 QNIDVVINLAGATLNKRWTPEYKQTLMLSRIQSTQALYELFKSRNKAPKVLFNASATGYY 118
Query: 172 PKYLMRAAHQEMITWLSDYCAKVYCLVCREWEGTALKVNK-DVRLALIRIGIVLGKDGGA 230
P L + + T D+ + + +WE A + + R+ + R G++L +GGA
Sbjct: 119 PPDLFMSYTEVYKTLPFDFLSDI----VYQWERFAQQFEQLGTRVVIGRFGMILSNEGGA 174
Query: 231 LAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAE 290
L M + + GG LGSGQQW+SWIH++D++ I ++N S G N TAP P R
Sbjct: 175 LQTMKLPYKYYIGGRLGSGQQWYSWIHINDLIQAILFLINNESASGPFNLTAPIPERQNL 234
Query: 291 MCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDAL 350
L + +P P A++ +LG+ + VVL+ Q+V+P + + LGF FKY +K AL
Sbjct: 235 FGYTLARAMHKPHETWAPSLAMRLILGQMSTVVLDTQKVLPNKIQALGFQFKYSNLKMAL 294
Query: 351 KAIM 354
+ ++
Sbjct: 295 EDLI 298
>sp|O32960|Y860_MYCLE Epimerase family protein ML0860 OS=Mycobacterium leprae (strain TN)
GN=ML0860 PE=3 SV=1
Length = 307
Score = 144 bits (363), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)
Query: 46 QKASQMTVSVTGATGFIGRRLVQRLQADNHQV-RVLTRSRSKAELIFPGKKTRFFPGVMI 104
Q + + V++ G++G IG L L+A++H V R++ R+ + AE + ++ F
Sbjct: 3 QASRKAVVAIAGSSGMIGSALAAALRANDHLVLRIVRRTPANAEELHWNPESGEFD---- 58
Query: 105 AEEPQWRDCIQGSTAVVNLAGTPIGTR-WSSEIKKEIKESRIRVTSKVVDLINESPEGVR 163
D I AVVNL G +G R WS K+ +++SRI T + + E+ GV+
Sbjct: 59 ------TDAITDVDAVVNLCGVNLGQRRWSGSFKQNLRDSRITPTEVLSAAVAEA--GVK 110
Query: 164 PSVLELVKPKYLMRAAHQEMITWLSDYCAKVY-CLVCREWEGTALKVN-KDVRLALIRIG 221
+ Y ++ + +D + +C++WEG L R+ L R G
Sbjct: 111 TFINASAVGYY---GNTRDRVVDENDRAGTGFLAQLCQDWEGATLPAQYAGTRVILARTG 167
Query: 222 IVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGT 281
+VL ++ G L++M PLF G +G+G+Q+ SWI L+D V + A+S+ S G +N T
Sbjct: 168 MVLAQEAGVLSRMRPLFSFALGARIGNGRQYMSWISLEDEVRALLFAISHQSLSGPLNLT 227
Query: 282 APNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFV-VLEGQRVVPARAKELGFP 340
P PV AE G + RP+ L +P FA++A LGE A +L GQR +PA + GF
Sbjct: 228 GPAPVTNAEFTTAFGRAINRPTPLMLPSFAVRAALGEFADEGLLIGQRAIPAALERAGFQ 287
Query: 341 FKYRYVKDALK 351
F + + +AL
Sbjct: 288 FHHNTIGEALS 298
>sp|Q9NRG7|D39U1_HUMAN Epimerase family protein SDR39U1 OS=Homo sapiens GN=SDR39U1 PE=1
SV=2
Length = 319
Score = 132 bits (331), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 79/241 (32%), Positives = 125/241 (51%), Gaps = 5/241 (2%)
Query: 119 AVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYL 175
A VNLAG I RW+ +KE+ SR+ T + I ++P+ + VL + Y
Sbjct: 80 AAVNLAGENILNPLRRWNETFQKEVIGSRLETTQLLAKAITKAPQPPKAWVL-VTGVAYY 138
Query: 176 MRAAHQEMITWLSDYCAKVYCLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMI 235
+ E + + +WE A R ++R G+VLG+ GGA+ M+
Sbjct: 139 QPSLTAEYDEDSPGGDFDFFSNLVTKWEAAARLPGDSTRQVVVRSGVVLGRGGGAMGHML 198
Query: 236 PLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHL 295
F + GGP+GSG Q+F WIH+ D+ ++ AL GV+NG AP+ AE L
Sbjct: 199 LPFRLGLGGPIGSGHQFFPWIHIGDLAGILTHALEANHVHGVLNGVAPSSATNAEFAQTL 258
Query: 296 GNVLGRPSWLPVPEFALKAVLG-EGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIM 354
G LGR +++P+P ++AV G + A ++LEGQ+V+P R G+ + + + ALK I+
Sbjct: 259 GAALGRRAFIPLPSAVVQAVFGRQRAIMLLEGQKVIPQRTLATGYQYSFPELGAALKEIV 318
Query: 355 S 355
+
Sbjct: 319 A 319
>sp|P67233|Y2239_MYCBO Epimerase family protein Mb2239 OS=Mycobacterium bovis (strain ATCC
BAA-935 / AF2122/97) GN=Mb2239 PE=3 SV=1
Length = 301
Score = 127 bits (318), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/315 (31%), Positives = 152/315 (48%), Gaps = 36/315 (11%)
Query: 49 SQMTVSVTGATGFIGRRLVQRLQADNHQV-RVLTRSRSKAELIFPGKKTRFFPGVMIAEE 107
+ V++ G++G IG L L+A +H V R++ R+ + +E + ++ F +
Sbjct: 2 ANAVVAIAGSSGLIGSALTAALRAADHTVLRIVRRAPANSEELHWNPESGEF-------D 54
Query: 108 PQWRDCIQGSTAVVNLAGTPIGTR-WSSEIKKEIKESRIRVT---------SKVVDLINE 157
P + AVVNL G I R WS K+ +++SRI T + V LIN
Sbjct: 55 PH---ALTDVDAVVNLCGVNIAQRRWSGAFKQSLRDSRITPTEVLSAAVADAGVATLINA 111
Query: 158 SPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVCREWE-GTALKVNKDVRLA 216
S G + + V E + + + A++ C +WE T R+
Sbjct: 112 SAVGYYGNTKDRVV---------DENDSAGTGFLAQL----CVDWETATRPAQQSGARVV 158
Query: 217 LIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRG 276
L R G+VL GG L +M PLF + G LGSG+Q+ SWI L+D V + A++ P+ G
Sbjct: 159 LARTGVVLSPAGGMLRRMRPLFSVGLGARLGSGRQYMSWISLEDEVRALQFAIAQPNLSG 218
Query: 277 VINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFV-VLEGQRVVPARAK 335
+N T P PV AE G + RP+ L +P A++A GE A +L GQR +P+ +
Sbjct: 219 PVNLTGPAPVTNAEFTTAFGRAVNRPTPLMLPSVAVRAAFGEFADEGLLIGQRAIPSALE 278
Query: 336 ELGFPFKYRYVKDAL 350
GF F + + +AL
Sbjct: 279 RAGFQFHHNTIGEAL 293
>sp|P67232|Y2216_MYCTU Epimerase family protein Rv2216/MT2273 OS=Mycobacterium
tuberculosis GN=Rv2216 PE=3 SV=1
Length = 301
Score = 127 bits (318), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/315 (31%), Positives = 152/315 (48%), Gaps = 36/315 (11%)
Query: 49 SQMTVSVTGATGFIGRRLVQRLQADNHQV-RVLTRSRSKAELIFPGKKTRFFPGVMIAEE 107
+ V++ G++G IG L L+A +H V R++ R+ + +E + ++ F +
Sbjct: 2 ANAVVAIAGSSGLIGSALTAALRAADHTVLRIVRRAPANSEELHWNPESGEF-------D 54
Query: 108 PQWRDCIQGSTAVVNLAGTPIGTR-WSSEIKKEIKESRIRVT---------SKVVDLINE 157
P + AVVNL G I R WS K+ +++SRI T + V LIN
Sbjct: 55 PH---ALTDVDAVVNLCGVNIAQRRWSGAFKQSLRDSRITPTEVLSAAVADAGVATLINA 111
Query: 158 SPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVCREWE-GTALKVNKDVRLA 216
S G + + V E + + + A++ C +WE T R+
Sbjct: 112 SAVGYYGNTKDRVV---------DENDSAGTGFLAQL----CVDWETATRPAQQSGARVV 158
Query: 217 LIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRG 276
L R G+VL GG L +M PLF + G LGSG+Q+ SWI L+D V + A++ P+ G
Sbjct: 159 LARTGVVLSPAGGMLRRMRPLFSVGLGARLGSGRQYMSWISLEDEVRALQFAIAQPNLSG 218
Query: 277 VINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFV-VLEGQRVVPARAK 335
+N T P PV AE G + RP+ L +P A++A GE A +L GQR +P+ +
Sbjct: 219 PVNLTGPAPVTNAEFTTAFGRAVNRPTPLMLPSVAVRAAFGEFADEGLLIGQRAIPSALE 278
Query: 336 ELGFPFKYRYVKDAL 350
GF F + + +AL
Sbjct: 279 RAGFQFHHNTIGEAL 293
>sp|P51108|DFRA_MAIZE Dihydroflavonol-4-reductase OS=Zea mays GN=A1 PE=3 SV=1
Length = 357
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
Query: 52 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRS-----RSKAELIFPGKKTRF-FPGVMIA 105
TV VTGA+GF+G LV +L + VR R ++K + PG R +A
Sbjct: 12 TVLVTGASGFVGSWLVMKLLQAGYTVRATVRDPANVGKTKPLMDLPGATERLSIWKADLA 71
Query: 106 EEPQWRDCIQGSTAVVNLAGTPI 128
EE + D I+G T V ++A TP+
Sbjct: 72 EEGSFHDAIRGCTGVFHVA-TPM 93
>sp|Q331Q7|GERKI_STRSQ dTDP-4-dehydro-6-deoxyglucose reductase OS=Streptomyces sp.
GN=gerKI PE=1 SV=1
Length = 326
Score = 39.3 bits (90), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 110/282 (39%), Gaps = 46/282 (16%)
Query: 52 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS---KAELIFPGKKTRFFPGVMIAEEP 108
TV VTGA GFIG V++L A +V L R+ +AEL + ++ E
Sbjct: 10 TVLVTGALGFIGSHFVRQLDARGAEVLALYRTERPEIQAELAALNRVR------LVRTEL 63
Query: 109 QWRDCIQGS--------TAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPE 160
+ ++G+ VV+ A ++ E EI +S R S +++ + +
Sbjct: 64 RDESDVRGAFKYLAPSIDTVVHCAAMDGNAQFKLERSAEILDSNQRTISNLLNCVRDFGV 123
Query: 161 G------------VRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVCREWEGTALK 208
G P+V + + + + LS ++ + RE GT
Sbjct: 124 GEVVVMSSSELYSASPTVAAREEDDFRRSMRYTDNGYVLSKTYGEILARLHREQFGT--- 180
Query: 209 VNKDVRLALIRIGIVLGKDGG---ALAKMIP--LFMMFAGGPL---GSGQQWFSWIHLDD 260
+ L+R G V G G + ++IP L AG + G G Q S++H+ D
Sbjct: 181 -----NVFLVRPGNVYGPGDGFDCSRGRVIPSMLAKADAGEEIEIWGDGSQTRSFVHVAD 235
Query: 261 IVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRP 302
+V L Y +N V + E+ + VLGRP
Sbjct: 236 LVRASLRLLETGKY-PEMNVAGAEQVSILELAGMVMAVLGRP 276
>sp|Q84KP0|DFRA_PYRCO Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase
OS=Pyrus communis GN=DFR PE=1 SV=1
Length = 347
Score = 38.9 bits (89), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Query: 52 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRS-----RSKAELIFPGKKTRF-FPGVMIA 105
+V VTGA+GFIG LV RL + VR R + K L P +T +A
Sbjct: 7 SVCVTGASGFIGSWLVMRLLEHGYTVRATVRDPTNQKKVKHLLDLPKAETHLTLWKADLA 66
Query: 106 EEPQWRDCIQGSTAVVNLAGTPI 128
+E + + IQG + V ++A TP+
Sbjct: 67 DEGSFDEAIQGCSGVFHVA-TPM 88
>sp|Q9XES5|DFRA_MALDO Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase
OS=Malus domestica GN=DFR PE=1 SV=1
Length = 348
Score = 38.9 bits (89), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Query: 52 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRS-----RSKAELIFPGKKTRF-FPGVMIA 105
+V VTGA+GFIG LV RL + VR R + K L P +T +A
Sbjct: 7 SVCVTGASGFIGSWLVMRLLEHGYTVRATVRDPTNQKKVKHLLDLPKAETHLTLWKADLA 66
Query: 106 EEPQWRDCIQGSTAVVNLAGTPI 128
+E + + IQG + V ++A TP+
Sbjct: 67 DEGSFDEAIQGCSGVFHVA-TPM 88
>sp|P51106|DFRA_HORVU Dihydroflavonol-4-reductase OS=Hordeum vulgare GN=ANT18 PE=3 SV=1
Length = 354
Score = 38.1 bits (87), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
Query: 53 VSVTGATGFIGRRLVQRLQADNHQVRVLTRS-----RSKAELIFPGKKTRF-FPGVMIAE 106
V VTGA+GF+G LV +L + VR R ++K L PG K R ++E
Sbjct: 8 VVVTGASGFVGSWLVMKLLQAGYTVRATVRDPANVEKTKPLLELPGAKERLSIWKADLSE 67
Query: 107 EPQWRDCIQGSTAVVNLAGTPI 128
+ + + I G T V ++A TP+
Sbjct: 68 DGSFNEAIAGCTGVFHVA-TPM 88
>sp|P24550|RCP_VIBCH Protein Rcp OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El
Tor Inaba N16961) GN=rcp PE=4 SV=1
Length = 205
Score = 38.1 bits (87), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 62/122 (50%), Gaps = 9/122 (7%)
Query: 41 TSDHTQKASQ---MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTR 97
+S+H + +Q M + +TG TGF+G +L++ L + H++ VLTR +KA F ++
Sbjct: 66 SSNHRTRFTQGVTMRILITGGTGFVGFQLIKLLSS--HELLVLTRDLTKAAQRFAHIPSQ 123
Query: 98 FFPGVMIAEEPQWRDCIQGSTAVVNL-AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLIN 156
+++ + D G A++NL + + K I SR+ +T ++V+ I
Sbjct: 124 NLQ--LLSPLDELSD-FNGIDAIINLRPDNRLPINAEEKPKAGIARSRLDITEQLVEKIR 180
Query: 157 ES 158
S
Sbjct: 181 AS 182
>sp|P51102|DFRA_ARATH Dihydroflavonol-4-reductase OS=Arabidopsis thaliana GN=DFRA PE=3
SV=2
Length = 382
Score = 38.1 bits (87), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
Query: 48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRS-----RSKAELIFPGKKTRF-FPG 101
+ + TV VTGA+GFIG LV RL + VR R + + L P KT
Sbjct: 3 SQKETVCVTGASGFIGSWLVMRLLERGYFVRATVRDPGNLKKVQHLLDLPNAKTLLTLWK 62
Query: 102 VMIAEEPQWRDCIQGSTAVVNLAGTPI 128
++EE + D I G V ++A TP+
Sbjct: 63 ADLSEEGSYDDAINGCDGVFHVA-TPM 88
>sp|P51110|DFRA_VITVI Dihydroflavonol-4-reductase OS=Vitis vinifera GN=DFR PE=1 SV=1
Length = 337
Score = 37.7 bits (86), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 99/255 (38%), Gaps = 42/255 (16%)
Query: 52 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRS-----RSKAELIFPGKKTRF-FPGVMIA 105
TV VTGA+GFIG LV RL VR R + K L P +T +A
Sbjct: 7 TVCVTGASGFIGSWLVMRLLERRLTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLA 66
Query: 106 EEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIR---------VTSKVVDLIN 156
+E + + I+G T V ++A TP+ S + + E+ + I +K V +
Sbjct: 67 DEGSFDEAIKGCTGVFHVA-TPMDFE-SKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLV 124
Query: 157 ESPEGVRPSVLELVKPKY---------LMRAAHQEMITWLSDYCAKVYCLVCREWEGTAL 207
+ ++ E P Y RA ++M W+ Y + E A
Sbjct: 125 FTSSAGTVNIQEHQLPVYDESCWSDMEFCRA--KKMTAWM-------YFVSKTLAEQAAW 175
Query: 208 KVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFS------WIHLDDI 261
K K+ + I I L G + +P ++ A P+ + +S ++HLDD+
Sbjct: 176 KYAKENNIDFITIIPTLVV-GPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLDDL 234
Query: 262 VNLIYEALSNPSYRG 276
N NP G
Sbjct: 235 CNAHIYLFENPKAEG 249
>sp|P14721|DFRA_ANTMA Dihydroflavonol-4-reductase OS=Antirrhinum majus GN=DFRA PE=2 SV=1
Length = 446
Score = 37.4 bits (85), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 38/90 (42%), Gaps = 6/90 (6%)
Query: 41 TSDHTQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRS-----RSKAELIFPGKK 95
TS T S TV VTGA GFIG LV RL + VR R + K + P
Sbjct: 8 TSSETAPPSSTTVCVTGAAGFIGSWLVMRLLERGYTVRATVRDPGNMKKVKHLIELPKAD 67
Query: 96 TRF-FPGVMIAEEPQWRDCIQGSTAVVNLA 124
T + E + + IQG V +LA
Sbjct: 68 TNLTLWKADMTVEGSFDEAIQGCEGVFHLA 97
>sp|P51104|DFRA_DIACA Dihydroflavonol-4-reductase OS=Dianthus caryophyllus GN=A PE=2 SV=1
Length = 360
Score = 37.4 bits (85), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 38/83 (45%), Gaps = 7/83 (8%)
Query: 52 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE-----LIFPGKKTRF-FPGVMIA 105
TV VTGA+GFIG L+ RL + VR R + L P KT +
Sbjct: 24 TVCVTGASGFIGSWLIMRLLERGYTVRATVRDPDNTKKVQHLLDLPNAKTNLTLWKADLH 83
Query: 106 EEPQWRDCIQGSTAVVNLAGTPI 128
EE + + G T V ++A TP+
Sbjct: 84 EEGSFDAAVDGCTGVFHIA-TPM 105
>sp|Q54L85|NSDHL_DICDI Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating
OS=Dictyostelium discoideum GN=nsdhl PE=3 SV=1
Length = 328
Score = 36.6 bits (83), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 54/107 (50%), Gaps = 5/107 (4%)
Query: 52 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWR 111
V +TG +GF+G+ +++ L ++ ++V L+RS + +++ T + +E
Sbjct: 3 NVFLTGGSGFLGKYIIEELISNGYKVFALSRSETSNKVLSQMGATPVMSS--LHDEQGLT 60
Query: 112 DCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES 158
+ I+G V++ A +SE +E+ + I T + ++ N+S
Sbjct: 61 EAIKGCDIVIHCAAK---LETNSESVQELYKDNIDATELLFNICNQS 104
>sp|P51105|DFRA_GERHY Dihydroflavonol-4-reductase OS=Gerbera hybrida GN=DFR PE=2 SV=1
Length = 366
Score = 36.2 bits (82), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 41/89 (46%), Gaps = 7/89 (7%)
Query: 46 QKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRS-----RSKAELIFPGKKTRF-F 99
++ S TV VTGA GFIG LV RL + V R + K L P +T
Sbjct: 2 EEDSPATVCVTGAAGFIGSWLVMRLLERGYVVHATVRDPGDLKKVKHLLELPKAQTNLKL 61
Query: 100 PGVMIAEEPQWRDCIQGSTAVVNLAGTPI 128
+ +E + + IQG V +LA TP+
Sbjct: 62 WKADLTQEGSFDEAIQGCHGVFHLA-TPM 89
>sp|Q9CA28|TKPR2_ARATH Tetraketide alpha-pyrone reductase 2 OS=Arabidopsis thaliana
GN=TKPR2 PE=2 SV=1
Length = 321
Score = 36.2 bits (82), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 95/245 (38%), Gaps = 24/245 (9%)
Query: 55 VTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI-----FPGKKTRFFPGVMIAE--- 106
VTG TGFI +++ L H VR R+ E + F G K R ++ A+
Sbjct: 6 VTGGTGFIASYIIKSLLELGHTVRTTVRNPRDEEKVGFLWEFQGAKQRL--KILQADLTV 63
Query: 107 EPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSV 166
E + + + G V + A +P+ I++ + + I+ T+ V+ +S ++ V
Sbjct: 64 EGSFDEAVNGVDGVFHTA-SPVLVPQDHNIQETLVDPIIKGTTNVMSSCAKSKATLKRIV 122
Query: 167 L--ELVKPKYLMRAAHQEMIT---WLS-DYCAKV-----YCLVCREWEGTALKVNKDVRL 215
L +Y A + W +YC + Y E E + K + L
Sbjct: 123 LTSSCSSIRYRFDATEASPLNESHWSDPEYCKRFNLWYGYAKTLGEREAWRIAEEKGLDL 182
Query: 216 ALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFS--WIHLDDIVNLIYEALSNPS 273
++ V+G G L ++ L F+ ++H+DD+V A+ P
Sbjct: 183 VVVNPSFVVGPLLGPKPTSTLLMILAIAKGLAGEYPNFTVGFVHIDDVVAAHVLAMEEPK 242
Query: 274 YRGVI 278
G I
Sbjct: 243 ASGRI 247
>sp|P73212|DFRA_SYNY3 Putative dihydroflavonol-4-reductase OS=Synechocystis sp. (strain
PCC 6803 / Kazusa) GN=dfrA PE=3 SV=1
Length = 343
Score = 35.8 bits (81), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 22/34 (64%)
Query: 55 VTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE 88
VTG TGF+G LV+ L +QVR L R+ S+ +
Sbjct: 15 VTGGTGFVGANLVRHLLEQGYQVRALVRASSRPD 48
>sp|Q54LW0|PADA_DICDI Prestalk A differentiation protein A OS=Dictyostelium discoideum
GN=padA PE=3 SV=2
Length = 301
Score = 35.0 bits (79), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 48 ASQMTVSVTGATGFIGRRLVQRLQ--ADNHQVRVLTRSRSKAELIFPGKKTRF 98
+++M++ VTG TG +GR++V+ L+ N +RV R + K + GK + F
Sbjct: 7 STKMSILVTGGTGVVGRQVVKSLELREKNINIRVGGRDQDKCNQLGFGKNSTF 59
>sp|A0R5C5|GALE_MYCS2 UDP-glucose 4-epimerase OS=Mycobacterium smegmatis (strain ATCC
700084 / mc(2)155) GN=MSMEG_6142 PE=1 SV=2
Length = 313
Score = 35.0 bits (79), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTR-SRSKAELIFPGKKTRFF 99
M VTGA GFIG LV RL AD H V L S +AE + + + F
Sbjct: 1 MRTLVTGAAGFIGSTLVDRLLADGHGVVGLDDLSSGRAENLHSAENSDKF 50
>sp|Q6MWV3|GALE_MYCTU UDP-glucose 4-epimerase OS=Mycobacterium tuberculosis GN=galE1
PE=3 SV=1
Length = 314
Score = 34.7 bits (78), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 17/27 (62%)
Query: 51 MTVSVTGATGFIGRRLVQRLQADNHQV 77
M VTGA GFIG LV RL AD H V
Sbjct: 1 MRALVTGAAGFIGSTLVDRLLADGHSV 27
>sp|Q9Y7K4|YGI2_SCHPO Uncharacterized protein C2A9.02 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBC2A9.02 PE=3 SV=1
Length = 295
Score = 34.7 bits (78), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 22/37 (59%)
Query: 51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA 87
M + VTGA GFIG +V++L H+V L RS A
Sbjct: 1 MRIFVTGAAGFIGSEIVRQLLEAGHEVVGLVRSEENA 37
>sp|Q559Z0|NDUA9_DICDI NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9,
mitochondrial OS=Dictyostelium discoideum GN=ndufa9 PE=3
SV=1
Length = 356
Score = 34.7 bits (78), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 48/111 (43%), Gaps = 8/111 (7%)
Query: 47 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA--ELIFPGKKTRFFP-GVM 103
+ + + +V GATGF GR LVQ L QV V R + +L G+ + P
Sbjct: 36 QTTGLVATVFGATGFTGRYLVQLLARTGIQVVVPYRCEDEGFRDLKVLGELGQIIPVRFD 95
Query: 104 IAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDL 154
I + I S V+N+AG TR S + + + S++ DL
Sbjct: 96 IRDSESIERAISHSNIVINMAGRDYETRNFS-----LDDINVHAASRIADL 141
>sp|O19883|YCF39_CYACA Uncharacterized protein ycf39 OS=Cyanidium caldarium GN=ycf39 PE=3
SV=1
Length = 312
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 54/106 (50%), Gaps = 9/106 (8%)
Query: 51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEE-PQ 109
M++ V GAT +GR++V++ ++V+ L R+ KA + + +M+ E PQ
Sbjct: 1 MSLLVIGATSTLGRQIVKKALIQGYEVKCLVRNSKKAAFLKAWGAILVYGDLMVPETLPQ 60
Query: 110 WRDCIQGSTAVVNLAGTPI---GTRWSSEI--KKEIKESRIRVTSK 150
C G++ +++++ + ++ +I K+ + E+ I+ K
Sbjct: 61 ---CFVGASVIIDVSTVKVKDLNNDYTVDIYCKRAVLEAAIQAKVK 103
>sp|Q9SK66|NDUA9_ARATH NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9,
mitochondrial OS=Arabidopsis thaliana GN=At2g20360 PE=2
SV=2
Length = 402
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 41/89 (46%), Gaps = 9/89 (10%)
Query: 49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR--SKAELIFPGKKTRFFPGVMIAE 106
S + +V GATGF+GR LVQ+L QV V R S L G + P +
Sbjct: 67 SGIVATVFGATGFLGRYLVQQLAKMGSQVLVPFRGSEDSPRHLKLMGDLGQVVP---MKF 123
Query: 107 EPQWRDCIQGSTA----VVNLAGTPIGTR 131
+P+ D I+ A V+NL G TR
Sbjct: 124 DPRDEDSIKAVMAKANVVINLIGREYETR 152
>sp|P48279|YCF39_CYAPA Uncharacterized protein ycf39 OS=Cyanophora paradoxa GN=ycf39
PE=3 SV=1
Length = 321
Score = 34.3 bits (77), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI 90
M++ V GATG +GR++V+ + +QVR L R+ KA +
Sbjct: 1 MSILVIGATGTLGRQIVRSALDEGYQVRCLVRNLRKAAFL 40
>sp|O31161|RS3_SPICI 30S ribosomal protein S3 OS=Spiroplasma citri GN=rpsC PE=3 SV=3
Length = 252
Score = 34.3 bits (77), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 49/94 (52%), Gaps = 11/94 (11%)
Query: 158 SPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVCREWEGTAL------KVNK 211
SP G+R V++ ++ A QE + WL K+ + +E +G ++ + K
Sbjct: 6 SPTGLRVGVIKTWDSRWY--AEKQEYVKWLHQDI-KIRKALMKELKGASVSKIEIERTKK 62
Query: 212 DVRLAL--IRIGIVLGKDGGALAKMIPLFMMFAG 243
++ + + R+G+VLG++G +AK++ L + G
Sbjct: 63 EIVIFIRTARVGVVLGQEGKNIAKLVKLVHITIG 96
>sp|Q5BK63|NDUA9_RAT NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9,
mitochondrial OS=Rattus norvegicus GN=Ndufa9 PE=1 SV=2
Length = 377
Score = 34.3 bits (77), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 50/131 (38%), Gaps = 29/131 (22%)
Query: 25 AKPFSR--CEAKKFRVFCTSDHTQ--------------KASQMTVSVTGATGFIGRRLVQ 68
A P SR A VFC+S H Q S + +V GATGF+GR +V
Sbjct: 12 ALPMSRPAISAAATSVFCSSSHRQLHHAVIPHGKGGRSSVSGVVATVFGATGFLGRYVVN 71
Query: 69 RLQADNHQVRVLTRSRSKAELIFPGKKTRFFP--GVMIAEEPQWRD------CIQGSTAV 120
L QV + R I+ R G +I E RD +Q S V
Sbjct: 72 HLGRMGSQVIIPYRCD-----IYDTMHLRLMGDLGQLIFLEWDARDKDSIRKAVQHSNVV 126
Query: 121 VNLAGTPIGTR 131
+NL G TR
Sbjct: 127 INLIGREWETR 137
>sp|P0AD12|YEEZ_ECOLI Protein YeeZ OS=Escherichia coli (strain K12) GN=yeeZ PE=1 SV=1
Length = 274
Score = 34.3 bits (77), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 47/105 (44%), Gaps = 12/105 (11%)
Query: 240 MFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAP-NPVRLAEMCDHLGNV 298
FAG G+ + +HL+D++ I L P + N AP +P R + +
Sbjct: 172 FFAGKTAPDGEHGVNLVHLEDVIGAITLLLQAPKGGHIYNICAPAHPARNV-FYPQMARL 230
Query: 299 LGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKY 343
LG L P+F + L G +++G R+ ELGF ++Y
Sbjct: 231 LG----LEPPQF--RNSLDSGKGKIIDGSRI----CNELGFEYQY 265
>sp|P0AD13|YEEZ_ECO57 Protein YeeZ OS=Escherichia coli O157:H7 GN=yeeZ PE=4 SV=1
Length = 274
Score = 34.3 bits (77), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 47/105 (44%), Gaps = 12/105 (11%)
Query: 240 MFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAP-NPVRLAEMCDHLGNV 298
FAG G+ + +HL+D++ I L P + N AP +P R + +
Sbjct: 172 FFAGKTAPDGEHGVNLVHLEDVIGAITLLLQAPKGGHIYNICAPAHPARNV-FYPQMARL 230
Query: 299 LGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKY 343
LG L P+F + L G +++G R+ ELGF ++Y
Sbjct: 231 LG----LEPPQF--RNSLDSGKGKIIDGSRI----CNELGFEYQY 265
>sp|P51103|DFRA_CALCH Dihydroflavonol-4-reductase OS=Callistephus chinensis GN=F PE=2
SV=1
Length = 364
Score = 33.9 bits (76), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Query: 46 QKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRS-----RSKAELIFPGKKTRF-F 99
++ S TV VTGA GFIG LV RL + VR R+ + K L P +T
Sbjct: 2 KEDSPPTVCVTGAAGFIGSWLVMRLLERGYIVRATVRNPGDMKKVKHLLELPKAETNLTL 61
Query: 100 PGVMIAEEPQWRDCIQGSTAVVNLAGTPI 128
+ +E + + I+G V ++A TP+
Sbjct: 62 WKADLTQEGSFDEAIEGCHGVFHVA-TPM 89
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 131,802,861
Number of Sequences: 539616
Number of extensions: 5599800
Number of successful extensions: 13793
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 13683
Number of HSP's gapped (non-prelim): 82
length of query: 355
length of database: 191,569,459
effective HSP length: 118
effective length of query: 237
effective length of database: 127,894,771
effective search space: 30311060727
effective search space used: 30311060727
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)