Query 018496
Match_columns 355
No_of_seqs 215 out of 2044
Neff 8.5
Searched_HMMs 46136
Date Fri Mar 29 09:30:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018496.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018496hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1581 UDP-galactose transpor 100.0 7.5E-57 1.6E-61 400.3 28.4 318 11-330 7-324 (327)
2 KOG1580 UDP-galactose transpor 100.0 4.1E-53 8.9E-58 362.7 18.1 307 13-323 8-317 (337)
3 PF08449 UAA: UAA transporter 100.0 3.8E-45 8.3E-50 342.8 32.1 300 20-325 2-303 (303)
4 KOG1582 UDP-galactose transpor 100.0 2.6E-40 5.6E-45 289.2 19.5 299 12-324 37-337 (367)
5 TIGR00817 tpt Tpt phosphate/ph 100.0 7E-32 1.5E-36 253.1 29.2 289 18-325 2-299 (302)
6 PTZ00343 triose or hexose phos 100.0 6.6E-31 1.4E-35 250.8 31.6 289 14-321 45-350 (350)
7 KOG1441 Glucose-6-phosphate/ph 100.0 3.9E-31 8.4E-36 244.2 11.5 293 14-326 13-314 (316)
8 PLN00411 nodulin MtN21 family 100.0 3.1E-27 6.8E-32 225.0 31.9 308 12-330 7-339 (358)
9 KOG1583 UDP-N-acetylglucosamin 100.0 2.3E-29 5E-34 221.3 10.6 284 18-317 3-312 (330)
10 KOG1443 Predicted integral mem 100.0 6.6E-27 1.4E-31 208.8 20.2 281 19-319 17-315 (349)
11 PF06027 DUF914: Eukaryotic pr 99.9 6.3E-25 1.4E-29 205.4 28.4 267 51-324 39-310 (334)
12 PRK11272 putative DMT superfam 99.9 4.5E-22 9.8E-27 185.7 32.0 283 14-323 4-289 (292)
13 KOG1444 Nucleotide-sugar trans 99.9 5.2E-23 1.1E-27 186.4 24.0 278 29-324 23-305 (314)
14 PRK11689 aromatic amino acid e 99.9 4.9E-22 1.1E-26 185.8 29.3 280 21-322 7-290 (295)
15 PRK15430 putative chlorampheni 99.9 1.3E-21 2.8E-26 183.0 29.5 276 12-318 2-284 (296)
16 PRK11453 O-acetylserine/cystei 99.9 7.8E-21 1.7E-25 178.0 33.6 278 22-322 8-290 (299)
17 TIGR00950 2A78 Carboxylate/Ami 99.9 1.6E-21 3.6E-26 178.6 26.8 242 53-314 16-259 (260)
18 PRK10532 threonine and homoser 99.9 1.9E-20 4E-25 175.0 30.8 275 16-323 10-285 (293)
19 KOG1442 GDP-fucose transporter 99.9 1.9E-22 4.1E-27 177.6 3.5 294 20-325 30-333 (347)
20 TIGR03340 phn_DUF6 phosphonate 99.8 3.7E-18 8E-23 158.5 23.0 267 22-316 5-280 (281)
21 PF04142 Nuc_sug_transp: Nucle 99.8 5.3E-18 1.1E-22 153.5 20.7 221 86-310 16-244 (244)
22 KOG2234 Predicted UDP-galactos 99.8 5E-17 1.1E-21 149.7 26.6 231 89-324 94-327 (345)
23 COG0697 RhaT Permeases of the 99.8 3.5E-16 7.7E-21 144.7 32.0 248 55-320 36-288 (292)
24 COG5070 VRG4 Nucleotide-sugar 99.8 3.7E-18 8.1E-23 146.4 14.1 280 34-325 22-302 (309)
25 KOG4510 Permease of the drug/m 99.8 1.9E-19 4.1E-24 158.3 4.5 226 90-322 100-328 (346)
26 TIGR00688 rarD rarD protein. T 99.8 1.3E-15 2.9E-20 139.4 27.6 242 20-294 4-255 (256)
27 TIGR00803 nst UDP-galactose tr 99.7 2.8E-17 6E-22 147.4 13.0 203 111-316 2-221 (222)
28 TIGR00776 RhaT RhaT L-rhamnose 99.7 2.7E-14 5.9E-19 133.1 26.4 269 23-320 6-289 (290)
29 KOG2765 Predicted membrane pro 99.7 3.3E-16 7.1E-21 144.2 11.6 231 91-325 163-396 (416)
30 PF03151 TPT: Triose-phosphate 99.7 5.2E-15 1.1E-19 124.6 15.9 141 179-319 1-153 (153)
31 KOG3912 Predicted integral mem 99.6 1.1E-13 2.4E-18 122.8 20.4 226 90-318 89-333 (372)
32 COG2962 RarD Predicted permeas 99.5 3E-11 6.5E-16 108.8 28.6 272 17-320 6-284 (293)
33 COG5006 rhtA Threonine/homoser 99.5 1.4E-11 3E-16 108.3 23.8 245 55-322 40-285 (292)
34 KOG2766 Predicted membrane pro 99.4 1.3E-14 2.8E-19 127.2 0.4 249 52-318 45-298 (336)
35 PF00892 EamA: EamA-like trans 99.0 3.5E-09 7.5E-14 85.3 10.7 124 188-318 1-125 (126)
36 COG2510 Predicted membrane pro 99.0 2.8E-09 6.1E-14 84.4 8.0 133 180-317 5-137 (140)
37 PF00892 EamA: EamA-like trans 98.9 8.2E-09 1.8E-13 83.0 9.4 120 29-158 2-125 (126)
38 KOG4314 Predicted carbohydrate 98.9 6.3E-09 1.4E-13 88.4 7.1 218 89-321 55-278 (290)
39 PF13536 EmrE: Multidrug resis 98.8 4.5E-08 9.8E-13 78.1 10.7 99 61-160 3-107 (113)
40 PF06800 Sugar_transport: Suga 98.8 2.5E-06 5.5E-11 77.6 21.3 209 90-314 48-266 (269)
41 PRK15430 putative chlorampheni 98.7 8.9E-07 1.9E-11 82.8 18.1 140 174-317 4-143 (296)
42 TIGR00688 rarD rarD protein. T 98.7 1.1E-06 2.3E-11 80.5 17.0 136 179-317 3-140 (256)
43 TIGR03340 phn_DUF6 phosphonate 98.5 2.3E-06 5E-11 79.4 14.0 133 180-319 3-135 (281)
44 PF05653 Mg_trans_NIPA: Magnes 98.5 3.8E-07 8.3E-12 85.2 8.3 221 91-323 53-296 (300)
45 TIGR00950 2A78 Carboxylate/Ami 98.3 1.8E-05 3.9E-10 72.3 15.1 132 16-154 126-259 (260)
46 PF13536 EmrE: Multidrug resis 98.3 3.6E-05 7.7E-10 61.3 13.7 103 217-322 6-109 (113)
47 PLN00411 nodulin MtN21 family 98.3 3.4E-05 7.3E-10 74.0 15.5 139 179-321 14-158 (358)
48 PRK02971 4-amino-4-deoxy-L-ara 98.2 5.9E-05 1.3E-09 61.5 14.1 122 178-323 2-126 (129)
49 COG2510 Predicted membrane pro 98.2 1.7E-05 3.8E-10 63.1 10.1 104 55-158 31-138 (140)
50 PF03151 TPT: Triose-phosphate 98.1 6E-05 1.3E-09 63.0 13.1 135 21-157 3-151 (153)
51 PRK11272 putative DMT superfam 98.1 0.00016 3.4E-09 67.5 16.2 133 18-160 150-286 (292)
52 PRK15051 4-amino-4-deoxy-L-ara 98.1 9.1E-05 2E-09 58.8 12.4 64 95-158 45-108 (111)
53 COG2962 RarD Predicted permeas 97.9 0.00045 9.8E-09 62.9 15.3 141 176-321 5-146 (293)
54 PF08449 UAA: UAA transporter 97.9 0.00028 6.1E-09 66.2 14.7 127 192-325 14-142 (303)
55 TIGR00817 tpt Tpt phosphate/ph 97.9 0.00036 7.7E-09 65.4 15.1 123 189-317 13-135 (302)
56 PRK10532 threonine and homoser 97.9 0.00055 1.2E-08 63.9 15.9 132 19-160 149-282 (293)
57 PTZ00343 triose or hexose phos 97.8 0.00047 1E-08 66.1 14.4 138 177-318 48-185 (350)
58 PRK11689 aromatic amino acid e 97.8 0.00065 1.4E-08 63.5 14.9 129 19-160 157-288 (295)
59 PRK13499 rhamnose-proton sympo 97.8 0.03 6.4E-07 53.2 25.6 227 91-319 77-341 (345)
60 PRK11453 O-acetylserine/cystei 97.8 0.00088 1.9E-08 62.7 14.7 123 181-318 7-131 (299)
61 PRK15051 4-amino-4-deoxy-L-ara 97.7 0.00048 1E-08 54.7 9.5 59 259-317 49-107 (111)
62 TIGR00776 RhaT RhaT L-rhamnose 97.6 0.00098 2.1E-08 62.2 13.1 130 179-320 2-137 (290)
63 PRK10452 multidrug efflux syst 97.6 0.0018 4E-08 51.9 12.0 63 258-320 41-104 (120)
64 PF06027 DUF914: Eukaryotic pr 97.6 0.002 4.4E-08 60.9 14.3 77 246-322 78-154 (334)
65 COG0697 RhaT Permeases of the 97.5 0.0072 1.6E-07 55.5 16.1 141 176-322 5-146 (292)
66 PRK13499 rhamnose-proton sympo 97.4 0.0067 1.5E-07 57.6 14.7 139 175-320 4-154 (345)
67 PF04142 Nuc_sug_transp: Nucle 97.3 0.0016 3.5E-08 59.2 10.1 70 254-323 24-93 (244)
68 KOG2922 Uncharacterized conser 97.3 0.002 4.3E-08 59.5 10.2 222 92-322 68-309 (335)
69 PRK09541 emrE multidrug efflux 97.3 0.008 1.7E-07 47.5 11.8 61 260-320 43-104 (110)
70 PRK02971 4-amino-4-deoxy-L-ara 97.2 0.0026 5.6E-08 51.8 8.4 70 91-160 51-123 (129)
71 PRK10452 multidrug efflux syst 97.1 0.0065 1.4E-07 48.7 10.3 71 90-160 33-104 (120)
72 PF04657 DUF606: Protein of un 97.1 0.026 5.7E-07 46.5 13.8 129 181-315 4-137 (138)
73 PRK10650 multidrug efflux syst 97.0 0.022 4.7E-07 44.9 11.9 59 259-317 47-106 (109)
74 PF05653 Mg_trans_NIPA: Magnes 96.9 0.0044 9.5E-08 58.0 8.9 120 174-319 3-122 (300)
75 PRK10650 multidrug efflux syst 96.9 0.015 3.2E-07 45.8 10.3 67 91-157 39-106 (109)
76 PRK09541 emrE multidrug efflux 96.9 0.014 3.1E-07 46.0 10.2 69 92-160 35-104 (110)
77 PRK11431 multidrug efflux syst 96.8 0.017 3.7E-07 45.2 10.1 68 91-158 33-101 (105)
78 COG2076 EmrE Membrane transpor 96.8 0.0087 1.9E-07 46.6 8.1 70 90-159 33-103 (106)
79 PF06800 Sugar_transport: Suga 96.8 0.026 5.6E-07 51.7 12.4 118 16-145 136-253 (269)
80 PRK11431 multidrug efflux syst 96.8 0.034 7.4E-07 43.5 11.2 60 258-317 40-100 (105)
81 COG2076 EmrE Membrane transpor 96.7 0.039 8.4E-07 43.0 11.0 60 260-319 43-103 (106)
82 COG4975 GlcU Putative glucose 96.4 0.00072 1.6E-08 60.0 -0.6 209 92-316 64-282 (288)
83 TIGR00803 nst UDP-galactose tr 96.1 0.067 1.5E-06 47.6 10.7 65 92-156 157-221 (222)
84 PF00893 Multi_Drug_Res: Small 96.0 0.055 1.2E-06 41.3 8.2 52 259-310 41-93 (93)
85 KOG1441 Glucose-6-phosphate/ph 95.9 0.027 5.9E-07 52.8 7.3 141 15-160 160-308 (316)
86 KOG4510 Permease of the drug/m 95.8 0.0046 9.9E-08 55.7 1.8 66 254-319 104-169 (346)
87 COG5006 rhtA Threonine/homoser 95.7 0.36 7.8E-06 43.5 13.1 60 100-159 223-282 (292)
88 PF00893 Multi_Drug_Res: Small 95.7 0.1 2.3E-06 39.8 8.7 56 95-150 37-93 (93)
89 KOG2234 Predicted UDP-galactos 95.7 0.75 1.6E-05 43.4 15.8 61 260-320 105-165 (345)
90 COG3238 Uncharacterized protei 95.6 0.41 8.9E-06 39.8 12.4 132 178-317 5-144 (150)
91 PF10639 UPF0546: Uncharacteri 95.2 0.038 8.3E-07 43.7 4.9 69 89-157 43-112 (113)
92 PF04657 DUF606: Protein of un 95.0 0.32 6.9E-06 40.1 10.1 102 54-156 29-138 (138)
93 PF10639 UPF0546: Uncharacteri 94.8 0.24 5.1E-06 39.2 8.3 60 257-316 51-111 (113)
94 PF06379 RhaT: L-rhamnose-prot 94.6 0.81 1.8E-05 43.1 12.6 141 174-321 3-155 (344)
95 PF07857 DUF1632: CEO family ( 93.3 0.47 1E-05 43.2 8.5 67 258-324 66-139 (254)
96 KOG2765 Predicted membrane pro 93.3 1.3 2.8E-05 42.2 11.4 131 25-160 254-391 (416)
97 COG4975 GlcU Putative glucose 93.1 0.039 8.4E-07 49.3 1.0 132 179-322 3-139 (288)
98 KOG1581 UDP-galactose transpor 91.7 3.6 7.7E-05 38.2 11.8 126 192-324 28-160 (327)
99 KOG1582 UDP-galactose transpor 89.7 2 4.3E-05 39.2 8.1 135 17-160 189-333 (367)
100 COG3238 Uncharacterized protei 89.0 4.2 9E-05 33.9 9.0 101 54-157 33-144 (150)
101 PHA03049 IMV membrane protein; 88.2 0.46 9.9E-06 33.2 2.4 41 303-343 6-48 (68)
102 KOG4314 Predicted carbohydrate 86.1 0.72 1.6E-05 40.0 3.0 63 260-322 66-128 (290)
103 KOG1583 UDP-N-acetylglucosamin 85.4 1.8 4E-05 39.6 5.4 69 91-159 238-314 (330)
104 KOG1580 UDP-galactose transpor 84.9 1.2 2.6E-05 39.8 3.9 73 86-158 240-312 (337)
105 KOG2922 Uncharacterized conser 81.9 0.52 1.1E-05 43.9 0.5 118 174-317 17-134 (335)
106 KOG3912 Predicted integral mem 81.4 3.4 7.4E-05 38.0 5.4 66 254-319 93-158 (372)
107 KOG2766 Predicted membrane pro 79.1 1 2.2E-05 40.8 1.3 74 247-320 78-151 (336)
108 PF06379 RhaT: L-rhamnose-prot 73.7 85 0.0018 29.9 21.6 230 87-318 73-339 (344)
109 PF05961 Chordopox_A13L: Chord 72.5 4.4 9.5E-05 28.6 2.8 39 303-341 6-46 (68)
110 COG5070 VRG4 Nucleotide-sugar 70.3 8.5 0.00018 34.2 4.8 71 90-160 227-297 (309)
111 PRK06638 NADH:ubiquinone oxido 70.1 75 0.0016 27.8 12.3 23 289-311 134-156 (198)
112 KOG1444 Nucleotide-sugar trans 68.4 1.1E+02 0.0023 28.9 12.2 131 180-315 14-145 (314)
113 KOG4831 Unnamed protein [Funct 66.6 9.1 0.0002 29.7 3.7 70 88-157 53-123 (125)
114 PRK02237 hypothetical protein; 62.6 13 0.00027 29.1 3.8 33 128-160 74-106 (109)
115 PF04342 DUF486: Protein of un 62.0 7.6 0.00017 30.1 2.6 29 288-316 77-105 (108)
116 PF07857 DUF1632: CEO family ( 61.4 1.3E+02 0.0028 27.4 14.1 98 55-160 27-135 (254)
117 PF02694 UPF0060: Uncharacteri 60.9 12 0.00025 29.2 3.4 34 127-160 71-104 (107)
118 PF04341 DUF485: Protein of un 60.5 49 0.0011 24.9 6.8 61 17-79 19-79 (91)
119 COG3169 Uncharacterized protei 52.1 15 0.00034 28.0 2.7 30 288-317 84-113 (116)
120 PF08507 COPI_assoc: COPI asso 51.9 1.3E+02 0.0028 24.4 12.6 36 282-318 69-104 (136)
121 PRK13108 prolipoprotein diacyl 51.4 1.7E+02 0.0037 29.2 10.7 22 299-320 254-275 (460)
122 PRK02237 hypothetical protein; 51.3 33 0.00072 26.8 4.5 45 276-320 62-106 (109)
123 COG1742 Uncharacterized conser 50.8 1E+02 0.0022 24.0 6.9 33 128-160 73-105 (109)
124 PF11346 DUF3149: Protein of u 49.8 12 0.00025 24.0 1.5 30 295-324 7-37 (42)
125 PF02694 UPF0060: Uncharacteri 49.6 31 0.00067 26.9 4.1 45 276-320 60-104 (107)
126 PF04971 Lysis_S: Lysis protei 45.9 11 0.00023 26.8 1.0 20 310-329 45-64 (68)
127 PF05297 Herpes_LMP1: Herpesvi 44.2 7.5 0.00016 35.7 0.0 91 115-215 51-143 (381)
128 PF01350 Flavi_NS4A: Flaviviru 44.0 1.8E+02 0.004 24.0 8.4 75 242-320 43-117 (144)
129 COG3162 Predicted membrane pro 43.8 1.5E+02 0.0032 22.8 7.2 59 18-78 28-86 (102)
130 COG5336 Uncharacterized protei 36.1 2.1E+02 0.0046 22.4 6.9 10 285-294 57-66 (116)
131 COG4736 CcoQ Cbb3-type cytochr 32.7 24 0.00052 24.5 1.0 26 308-333 19-45 (60)
132 TIGR02840 spore_YtaF putative 32.0 1.1E+02 0.0024 26.9 5.5 44 271-314 31-76 (206)
133 PF03348 Serinc: Serine incorp 31.7 4.8E+02 0.01 25.8 10.4 23 298-320 282-304 (429)
134 PF06570 DUF1129: Protein of u 31.4 3.5E+02 0.0077 23.5 10.8 15 83-97 142-156 (206)
135 COG1971 Predicted membrane pro 30.5 74 0.0016 27.6 3.9 44 281-324 48-93 (190)
136 PF07168 Ureide_permease: Urei 29.5 39 0.00085 31.6 2.2 21 184-204 2-22 (336)
137 PF04277 OAD_gamma: Oxaloaceta 29.4 69 0.0015 23.1 3.2 10 304-313 9-18 (79)
138 PRK12437 prolipoprotein diacyl 29.1 44 0.00096 30.7 2.5 25 299-323 235-259 (269)
139 PF15102 TMEM154: TMEM154 prot 28.6 43 0.00094 27.7 2.1 20 308-327 70-89 (146)
140 COG3169 Uncharacterized protei 27.6 1.6E+02 0.0035 22.6 4.8 29 129-157 85-113 (116)
141 PRK14778 lipoprotein signal pe 24.4 82 0.0018 27.3 3.2 13 301-313 115-127 (186)
142 PF04342 DUF486: Protein of un 23.0 3.7E+02 0.0081 21.0 8.7 29 128-156 77-105 (108)
143 KOG1442 GDP-fucose transporter 22.3 89 0.0019 28.9 3.0 106 54-159 214-327 (347)
144 TIGR00544 lgt prolipoprotein d 21.1 73 0.0016 29.4 2.4 24 299-322 246-269 (278)
145 PF02673 BacA: Bacitracin resi 21.1 5.5E+02 0.012 23.4 8.1 79 14-100 76-157 (259)
146 PRK00052 prolipoprotein diacyl 20.8 75 0.0016 29.2 2.4 27 298-324 236-262 (269)
147 PF15471 TMEM171: Transmembran 20.4 86 0.0019 28.7 2.5 38 301-338 161-199 (319)
No 1
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=100.00 E-value=7.5e-57 Score=400.29 Aligned_cols=318 Identities=49% Similarity=0.839 Sum_probs=294.7
Q ss_pred CCccchhhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCceeehHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCchhHH
Q 018496 11 VKDSRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKY 90 (355)
Q Consensus 11 ~~~~~~~~~~~~~~g~~~~~~~~~~~~e~i~~~~~~~~~~~f~~p~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 90 (355)
...++.+++++|+.|+|+.|+.||++||++++++||+++++|.+|.|++++|.+.+.+++++++..++...+++.||+.|
T Consensus 7 ~~~~~~~~L~~c~~GI~~t~l~~gVlQEki~T~~y~~~~~rF~~~~fL~~~q~l~~~~~s~~~l~~~k~~~~~~apl~~y 86 (327)
T KOG1581|consen 7 GMANKIILLVFCFSGIYATFLTWGVLQEKIMTRPYGEDGERFEHSLFLVFCQRLVALLVSYAMLKWWKKELSGVAPLYKY 86 (327)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhcceeecccCcccccccccHHHHHHHHHHHHHHHHHHHhcccccCCCCCchhHH
Confidence 34577889999999999999999999999999999999999999999999999999999988877766667788999999
Q ss_pred HHHHHHHHHHHHHhHHhhhcCchhHHHHHhhhchHHHHHHHHHHhccccCchhhHHHHHHHHhhHHhhccCCCCCCCCCC
Q 018496 91 CLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYS 170 (355)
Q Consensus 91 ~~~~~~~~~~~~~~~~sl~~ls~~~~~i~ks~~pi~v~i~~~l~~~~k~s~~~~ls~~li~~Gv~l~~~~~~~~~~~~~~ 170 (355)
..+++.+..+..++++||+|+|+|+|++.|+||++|||+++.+++|+|+++.+|++.+++..||.++...+..+ +++.
T Consensus 87 ~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~--s~~~ 164 (327)
T KOG1581|consen 87 SLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSD--SSSK 164 (327)
T ss_pred hHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCC--Cccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999998875322 1222
Q ss_pred CCCCchHHHHHHHHHHHHHHHhhHHHHHHHHccCCCChhhHHHHhhHHHHHHHHHHHHHhCchHHHHHHhhhChHHHHHH
Q 018496 171 KGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDV 250 (355)
Q Consensus 171 ~~~~~~~~G~~~~~~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~l 250 (355)
.+.+++++|+.++..++++||+++..||++.++++.+++++|+++|+++++......+..|.+.++++|...||+.++++
T Consensus 165 ~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di 244 (327)
T KOG1581|consen 165 SGRENSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDI 244 (327)
T ss_pred cCCCCchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHH
Confidence 33578999999999999999999999999999999999999999999999999888888899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhhhhHhhhhHHhhhhhccccCCCCCC
Q 018496 251 ALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSEKPRPS 330 (355)
Q Consensus 251 l~~~~~~~~~~~~~~~~i~~~~~~~~si~~~~~~v~siils~~~fge~~t~~~~iG~~lv~~Gi~~~~~~k~k~~~~~~~ 330 (355)
++++.++++||.|+|++++++||++.++++++|+++++++|.+.|||++++.||.|..++++|+++..+.|+|++.+.++
T Consensus 245 ~l~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~~~~~~~k 324 (327)
T KOG1581|consen 245 LLYSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKKKNQPRKK 324 (327)
T ss_pred HHHHHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHhccCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998875443333
No 2
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.1e-53 Score=362.66 Aligned_cols=307 Identities=31% Similarity=0.504 Sum_probs=276.5
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHhhhhcccCCC---CCCCceeehHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCchhH
Q 018496 13 DSRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYG---ADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYK 89 (355)
Q Consensus 13 ~~~~~~~~~~~~g~~~~~~~~~~~~e~i~~~~~~---~~~~~f~~p~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 89 (355)
-.++.++.+|..|+++||..||+.||++.+.+|| +.+++|+|.+.+++.||.++.+.+-+....+++....+.+-+.
T Consensus 8 lper~rf~ica~GifvCYF~yGI~QEkitrGkYg~~g~~~E~FTfalaLVf~qC~~N~vfAkvl~~ir~~~~~D~t~~~~ 87 (337)
T KOG1580|consen 8 LPERGRFLICAGGIFVCYFVYGIQQEKITRGKYGLPGESIEKFTFALALVFFQCTANTVFAKVLFLIRKKTEIDNTPTKM 87 (337)
T ss_pred cccccceeEEecchhheehhhhhHHHHhhccccCCCCcchheehHHHHHHHHHHHHHHHHHHhheeecccccccCCcchH
Confidence 3566789999999999999999999999998887 4568999999999999999999986554444422333567788
Q ss_pred HHHHHHHHHHHHHHhHHhhhcCchhHHHHHhhhchHHHHHHHHHHhccccCchhhHHHHHHHHhhHHhhccCCCCCCCCC
Q 018496 90 YCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPY 169 (355)
Q Consensus 90 ~~~~~~~~~~~~~~~~~sl~~ls~~~~~i~ks~~pi~v~i~~~l~~~~k~s~~~~ls~~li~~Gv~l~~~~~~~~~~~~~ 169 (355)
|..+++.+.+++..+|.|++|+|+|+|++.|+|+|+|||+++.++.||+++|++|.++++++.||+++.+.+. +..
T Consensus 88 YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~--Kv~-- 163 (337)
T KOG1580|consen 88 YAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKEN--KVG-- 163 (337)
T ss_pred HHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhcccc--ccC--
Confidence 9999999999999999999999999999999999999999999999999999999999999999999988742 111
Q ss_pred CCCCCchHHHHHHHHHHHHHHHhhHHHHHHHHccCCCChhhHHHHhhHHHHHHHHHHHHHhCchHHHHHHhhhChHHHHH
Q 018496 170 SKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFD 249 (355)
Q Consensus 170 ~~~~~~~~~G~~~~~~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 249 (355)
..+.+...+|-+++++|.-+||+++..|||+.+.+..+..++|+|+|+|+.+.+...++++||+++.+.|.++||..|+.
T Consensus 164 g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~~ 243 (337)
T KOG1580|consen 164 GAEDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFWD 243 (337)
T ss_pred CCcccccchHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHHHHH
Confidence 11235667899999999999999999999999988888899999999999999988889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhhhhHhhhhHHhhhhhccc
Q 018496 250 VALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKV 323 (355)
Q Consensus 250 ll~~~~~~~~~~~~~~~~i~~~~~~~~si~~~~~~v~siils~~~fge~~t~~~~iG~~lv~~Gi~~~~~~k~k 323 (355)
+.++++++++||.|+|..+..+||++.|+++++|+.++++.|+++|++|++..||+|..+++.++.......+|
T Consensus 244 l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~~GK~ 317 (337)
T KOG1580|consen 244 LTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVVDGKK 317 (337)
T ss_pred HHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhhcCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999887765443
No 3
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=100.00 E-value=3.8e-45 Score=342.85 Aligned_cols=300 Identities=37% Similarity=0.563 Sum_probs=269.5
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcccCCCCCCCceeehHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHH
Q 018496 20 IFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNIL 99 (355)
Q Consensus 20 ~~~~~g~~~~~~~~~~~~e~i~~~~~~~~~~~f~~p~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (355)
++|+.|+|++|..++++||++.+++++ .++|+++++.|++++.+.+.+.....+.+.+++.|++++++.++++.+
T Consensus 2 ~~~~~~i~~~~~~~g~~qE~i~~~~~~-----~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (303)
T PF08449_consen 2 LICVAGIFGGCCSYGILQEKIMTTPYG-----SPFPLFLTFVQFAFNALFSFILLSLFKFPKSRKIPLKKYAILSFLFFL 76 (303)
T ss_pred EeeHHHHHHHHHHHHHHHHHHHcCCCC-----CcccHHHHHHHHHHHHHHHHHHHHhccccCCCcChHHHHHHHHHHHHH
Confidence 578999999999999999999988664 178999999999999999887766655345667899999999999999
Q ss_pred HHHHhHHhhhcCchhHHHHHhhhchHHHHHHHHHHhccccCchhhHHHHHHHHhhHHhhccCCCCCCCCCCCCCCchHHH
Q 018496 100 TTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWG 179 (355)
Q Consensus 100 ~~~~~~~sl~~ls~~~~~i~ks~~pi~v~i~~~l~~~~k~s~~~~ls~~li~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G 179 (355)
++.++|.|++|+|+|+++++|+++|+|+|+++.+++|||++++||++++++++|++++...+...+.++ ..+...+..|
T Consensus 77 ~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~-~~~~~~~~~G 155 (303)
T PF08449_consen 77 ASVLSNAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSS-NSSSFSSALG 155 (303)
T ss_pred HHHHHHHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeeccccccccc-ccccccchhH
Confidence 999999999999999999999999999999999999999999999999999999999987743222111 1111223459
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHccCCCChhhHHHHhhHHHHHHHHHHHHH--hCchHHHHHHhhhChHHHHHHHHHHHHH
Q 018496 180 VSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLIL--EGHLFLAIDFVYHHLDCFFDVALLSTVA 257 (355)
Q Consensus 180 ~~~~~~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~g~~~~~~~~~~~~~~~~~~ll~~~~~~ 257 (355)
+++++.+.++||+.+++||++.++++.+++++++|+|+++.+...+.... .++..+..++..++|+.+..++..++++
T Consensus 156 ~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~~ 235 (303)
T PF08449_consen 156 IILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLTG 235 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998887777 7888888889889999999999999999
Q ss_pred HHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhhhhHhhhhHHhhhhhccccC
Q 018496 258 TTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSE 325 (355)
Q Consensus 258 ~~~~~~~~~~i~~~~~~~~si~~~~~~v~siils~~~fge~~t~~~~iG~~lv~~Gi~~~~~~k~k~~ 325 (355)
+++|.+++.+++++||++.++++++||++++++|+++|||++++.||+|+++++.|..++.+.|+||+
T Consensus 236 ~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~~ 303 (303)
T PF08449_consen 236 ALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKKN 303 (303)
T ss_pred HHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999988874
No 4
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.6e-40 Score=289.24 Aligned_cols=299 Identities=28% Similarity=0.419 Sum_probs=268.5
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCcee-ehHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCchhHH
Q 018496 12 KDSRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFK-YSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKY 90 (355)
Q Consensus 12 ~~~~~~~~~~~~~g~~~~~~~~~~~~e~i~~~~~~~~~~~f~-~p~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 90 (355)
+..+..|+++|..|+++.|+.||++||.+++.+ +|+ +-|++++.|.++-..+.++.+...+ ..++..|||.|
T Consensus 37 ~kpkw~QFlic~~g~Ff~Yl~yGy~qElif~~~------gfkp~GWylTlvQf~~Ysg~glie~~~~~-~k~r~iP~rtY 109 (367)
T KOG1582|consen 37 DKPKWTQFLICSAGVFFLYLVYGYLQELIFNVE------GFKPFGWYLTLVQFLVYSGFGLIELQLIQ-TKRRVIPWRTY 109 (367)
T ss_pred cCchhhhHHHHHhHHHHHHHHHHHHHHHHhccc------cCcccchHHHHHHHHHHHhhhheEEEeec-ccceecchhHh
Confidence 556667999999999999999999999999762 365 8899999999988776666544332 23556899999
Q ss_pred HHHHHHHHHHHHHhHHhhhcCchhHHHHHhhhchHHHHHHHHHHhccccCchhhHHHHHHHHhhHHhhccCCCCCCCCCC
Q 018496 91 CLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYS 170 (355)
Q Consensus 91 ~~~~~~~~~~~~~~~~sl~~ls~~~~~i~ks~~pi~v~i~~~l~~~~k~s~~~~ls~~li~~Gv~l~~~~~~~~~~~~~~ 170 (355)
..++++..+.+.++|-|+.|+++|+|+++|+|+.+|||+.+.++-++|+++.++.+..++.+|.+++...|+ +.
T Consensus 110 ~~la~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs--~~---- 183 (367)
T KOG1582|consen 110 VILAFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADS--QT---- 183 (367)
T ss_pred hhhHhhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhccc--cc----
Confidence 999999999999999999999999999999999999999999999999999999999999999999998742 22
Q ss_pred CCCCchHHHHHHHHHHHHHHHhhHHHHHHHHccCCCChhhHHHHhhHHHHHHHHHHHHHhCchHHHHHHhhhChH-HHHH
Q 018496 171 KGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLD-CFFD 249 (355)
Q Consensus 171 ~~~~~~~~G~~~~~~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~-~~~~ 249 (355)
+.+++..|++++.++.++||+.+..||+.++.++.+..++.+|....+.+..+..+..+|++..++.++..||. ....
T Consensus 184 -sPNF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy 262 (367)
T KOG1582|consen 184 -SPNFNLIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGY 262 (367)
T ss_pred -CCCcceeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHH
Confidence 24789999999999999999999999999999988889999999999999988888999999999999999996 5566
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhhhhHhhhhHHhhhhhcccc
Q 018496 250 VALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVS 324 (355)
Q Consensus 250 ll~~~~~~~~~~~~~~~~i~~~~~~~~si~~~~~~v~siils~~~fge~~t~~~~iG~~lv~~Gi~~~~~~k~k~ 324 (355)
.++.++.+.+|+.+....++.+|+.+++.+++.|+.+++++|+++|..|+|.+..-|..+++.|+++..+.|+.|
T Consensus 263 ~~~~s~~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk~nk 337 (367)
T KOG1582|consen 263 AFLFSLAGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSKRNK 337 (367)
T ss_pred HHHHHHHhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccCCCC
Confidence 667788999999999999999999999999999999999999999999999999999999999999999998433
No 5
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=100.00 E-value=7e-32 Score=253.06 Aligned_cols=289 Identities=13% Similarity=0.078 Sum_probs=225.9
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCceeehHHHHHHHHHHHHHHHHHHHHh--hcCCCCCCCchhHHHHHHH
Q 018496 18 KMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIA--SRKAIDPVAPVYKYCLVSM 95 (355)
Q Consensus 18 ~~~~~~~g~~~~~~~~~~~~e~i~~~~~~~~~~~f~~p~~l~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 95 (355)
+....+..||++...+.++||.+.+ .|++|.++++.|+.++.++..+.+.. +++++.++..++.+++.|+
T Consensus 2 ~~~~~~~~w~~~~~~~~~~NK~~l~--------~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 73 (302)
T TIGR00817 2 QTGLLFGLWYFLNVYFNIYNKKLLN--------VFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVAI 73 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh--------hCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHH
Confidence 4567788999999999999999984 27899999999999988777555321 1111122345667889999
Q ss_pred HHHHHHHHhHHhhhcCchhHHHHHhhhchHHHHHHHHHHhccccCchhhHHHHHHHHhhHHhhccCCCCCCCCCCCCCCc
Q 018496 96 SNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGREN 175 (355)
Q Consensus 96 ~~~~~~~~~~~sl~~ls~~~~~i~ks~~pi~v~i~~~l~~~~k~s~~~~ls~~li~~Gv~l~~~~~~~~~~~~~~~~~~~ 175 (355)
+++....++|.+++|+|.+.+++++++.|+++++++++++|||++++++++++++++|+++.... + .++
T Consensus 74 ~~~~~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~----~-------~~~ 142 (302)
T TIGR00817 74 VHTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDT----E-------LSF 142 (302)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCC----c-------ccc
Confidence 98888899999999999999999999999999999999999999999999999999999875322 1 235
Q ss_pred hHHHHHHHHHHHHHHHhhHHHHHHHHccCCCChhhHHHHhhHHHHHHHHHHHHHhCchH-HHHHHhh----hChHHHHH-
Q 018496 176 TVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLF-LAIDFVY----HHLDCFFD- 249 (355)
Q Consensus 176 ~~~G~~~~~~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~~~-~~~~~~~----~~~~~~~~- 249 (355)
+..|.++++++.++++++.++.||..++.+.++.+++.|.+..+.+..+|.....++.. ...+... ..+.....
T Consensus 143 ~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (302)
T TIGR00817 143 NWAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTV 222 (302)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHH
Confidence 67899999999999999999999988754567889999999999888888765433211 1101111 11111111
Q ss_pred HHHHHH-HHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhhhhHhhhhHHhhhhhccccC
Q 018496 250 VALLST-VATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSE 325 (355)
Q Consensus 250 ll~~~~-~~~~~~~~~~~~i~~~~~~~~si~~~~~~v~siils~~~fge~~t~~~~iG~~lv~~Gi~~~~~~k~k~~ 325 (355)
.+..+. +....+.+.+.++++.||+++++.++++|++++++|++++||++|+.+++|.++++.|++++.+.|+||+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~~~~ 299 (302)
T TIGR00817 223 SLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKAQKP 299 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhccCc
Confidence 212222 2233445666799999999999999999999999999999999999999999999999998887665543
No 6
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=100.00 E-value=6.6e-31 Score=250.77 Aligned_cols=289 Identities=12% Similarity=0.089 Sum_probs=226.9
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCceeehHHHHHHHHHHHHHHHHHHHHhhcCCCC----CCCchhH
Q 018496 14 SRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAID----PVAPVYK 89 (355)
Q Consensus 14 ~~~~~~~~~~~g~~~~~~~~~~~~e~i~~~~~~~~~~~f~~p~~l~~~~~~~~~l~~~~~~~~~~~~~~----~~~~~~~ 89 (355)
..++|....+..||.+...+.+++|.+.+ .+++|+++++.|++++++++.+.+..+.++.+ ++..++.
T Consensus 45 ~~~~~~~~~~~~wy~~s~~~~~~nK~vl~--------~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (350)
T PTZ00343 45 NFKWKLALLFLTWYALNVLYVVDNKLALN--------MLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKN 116 (350)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHH--------hCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 34789999999999999999999999984 37889999999999998877655443221111 1234567
Q ss_pred HHHHHHHHHHHHHHhHHhhhcCchhHHHHHhhhchHHHHHHHHHHhccccCchhhHHHHHHHHhhHHhhccCCCCCCCCC
Q 018496 90 YCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPY 169 (355)
Q Consensus 90 ~~~~~~~~~~~~~~~~~sl~~ls~~~~~i~ks~~pi~v~i~~~l~~~~k~s~~~~ls~~li~~Gv~l~~~~~~~~~~~~~ 169 (355)
++++|+++...+...+.|+++++++.++++|++.|+++++++++++|||++++++++++++++|+.+.... +
T Consensus 117 llp~gl~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~----~---- 188 (350)
T PTZ00343 117 FLPQGLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVK----E---- 188 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecc----c----
Confidence 88999999888888899999999999999999999999999999999999999999999999999997643 2
Q ss_pred CCCCCchHHHHHHHHHHHHHHHhhHHHHHHHHccCC-----CChhhHHHHhhHHHHHHHHHHHH-HhCch-HHHHH-Hh-
Q 018496 170 SKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYD-----MEIHNQIFYTTLCSCVLSLSGLI-LEGHL-FLAID-FV- 240 (355)
Q Consensus 170 ~~~~~~~~~G~~~~~~s~~~~a~~~v~~~~~~~~~~-----~~~~~~~~~~~~~~~i~~~~~~~-~~g~~-~~~~~-~~- 240 (355)
.+.++.|++++++|++++++++++.|+.+++++ .++.++..+..+++.++.+|+.. .++.. ...+. ..
T Consensus 189 ---~~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~ 265 (350)
T PTZ00343 189 ---LHFTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTA 265 (350)
T ss_pred ---chhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhh
Confidence 246788999999999999999999999887643 45666777778888888888755 33321 11110 00
Q ss_pred h--hC--hHHHHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhhhhHhhhhHHh
Q 018496 241 Y--HH--LDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYT 316 (355)
Q Consensus 241 ~--~~--~~~~~~ll~~~~~~~~~~~~~~~~i~~~~~~~~si~~~~~~v~siils~~~fge~~t~~~~iG~~lv~~Gi~~ 316 (355)
. .. ...+..++..+++..+.+.+.|.++++.+|+++++.+++||++++++|+++|||++|+.+++|.+++++|+++
T Consensus 266 ~~~~~~~~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~l 345 (350)
T PTZ00343 266 NMTNYTKGIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALL 345 (350)
T ss_pred cccccchHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHH
Confidence 0 00 1111122222333344445666799999999999999999999999999999999999999999999999988
Q ss_pred hhhhc
Q 018496 317 RSFFK 321 (355)
Q Consensus 317 ~~~~k 321 (355)
+.+.|
T Consensus 346 Ys~~k 350 (350)
T PTZ00343 346 YSLFK 350 (350)
T ss_pred HhhcC
Confidence 87654
No 7
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=99.97 E-value=3.9e-31 Score=244.16 Aligned_cols=293 Identities=19% Similarity=0.223 Sum_probs=245.9
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCceeehHHHHHHHHHHHHHHHHHHHHhhcCC---CCCCCchhHH
Q 018496 14 SRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKA---IDPVAPVYKY 90 (355)
Q Consensus 14 ~~~~~~~~~~~g~~~~~~~~~~~~e~i~~~~~~~~~~~f~~p~~l~~~~~~~~~l~~~~~~~~~~~~---~~~~~~~~~~ 90 (355)
++..+...+...||++...+.+++|++++. |+ |++|.+++..|..++.+........+-.+ .+++.+++..
T Consensus 13 ~~~~~~~~~~~~w~~~~v~~~~~nK~il~~-~~-----f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~l 86 (316)
T KOG1441|consen 13 KKILRIGIAFAIWYVLSVGVIILNKYILSK-YG-----FPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTL 86 (316)
T ss_pred chhHHHHHHHHHHhhhheeeEEeeHhhhcc-CC-----CCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHH
Confidence 345566788999999999999999999975 44 99999999999888887776655443221 1234688899
Q ss_pred HHHHHHHHHHHHHhHHhhhcCchhHHHHHhhhchHHHHHHHHHHhccccCchhhHHHHHHHHhhHHhhccCCCCCCCCCC
Q 018496 91 CLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYS 170 (355)
Q Consensus 91 ~~~~~~~~~~~~~~~~sl~~ls~~~~~i~ks~~pi~v~i~~~l~~~~k~s~~~~ls~~li~~Gv~l~~~~~~~~~~~~~~ 170 (355)
+++|+.++.+.+++|.|++|+++++.++.|++.|+++.++++++.+|++++..++++++++.||.+.+.. |
T Consensus 87 lpl~~~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~----e----- 157 (316)
T KOG1441|consen 87 LPLGLVFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVT----E----- 157 (316)
T ss_pred HHHHHHHHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeec----c-----
Confidence 9999999999999999999999999999999999999999999999999999999999999999998765 2
Q ss_pred CCCCchHHHHHHHHHHHHHHHhhHHHHHHHHc--cCCCChhhHHHHhhHHHHHHHH-HHHHH-hCchHHHHHHhh-h-Ch
Q 018496 171 KGRENTVWGVSLMVGYLGFDGFTSTFQDKLFK--GYDMEIHNQIFYTTLCSCVLSL-SGLIL-EGHLFLAIDFVY-H-HL 244 (355)
Q Consensus 171 ~~~~~~~~G~~~~~~s~~~~a~~~v~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~-~~~~~-~g~~~~~~~~~~-~-~~ 244 (355)
.+++++|.+.++++.+..++++++++++++ +++.++.+++.|+.+++.+.++ |+... +++.. . .+.. . +-
T Consensus 158 --~~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~-~-~~~~~~~~~ 233 (316)
T KOG1441|consen 158 --LSFNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKF-V-GFLTAPWFV 233 (316)
T ss_pred --ccccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccce-e-eeeccccch
Confidence 368999999999999999999999999994 5678999999999999999888 77543 33321 0 0011 1 11
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhhhhHhhhhHHhhhhhcccc
Q 018496 245 DCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVS 324 (355)
Q Consensus 245 ~~~~~ll~~~~~~~~~~~~~~~~i~~~~~~~~si~~~~~~v~siils~~~fge~~t~~~~iG~~lv~~Gi~~~~~~k~k~ 324 (355)
..+ ..++.++++...|+..|.+++++||+|.++.+..|.++.++.|+++|++++|+.|..|+++.+.|+++|.+.|.|+
T Consensus 234 ~~~-~~~~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~ 312 (316)
T KOG1441|consen 234 TFL-ILLLNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKE 312 (316)
T ss_pred hhH-HHHHHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhh
Confidence 222 2233457778888999999999999999999999999999999999999999999999999999999999988877
Q ss_pred CC
Q 018496 325 EK 326 (355)
Q Consensus 325 ~~ 326 (355)
++
T Consensus 313 ~~ 314 (316)
T KOG1441|consen 313 KK 314 (316)
T ss_pred hc
Confidence 54
No 8
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=99.96 E-value=3.1e-27 Score=225.03 Aligned_cols=308 Identities=16% Similarity=0.197 Sum_probs=220.4
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCceeehHHHHHHHHHHHHHHHHHHHHhhcC-CCCCCCchh--
Q 018496 12 KDSRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRK-AIDPVAPVY-- 88 (355)
Q Consensus 12 ~~~~~~~~~~~~~g~~~~~~~~~~~~e~i~~~~~~~~~~~f~~p~~l~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~-- 88 (355)
.++|+.+....+..++++|..+.++.|..++.-.+ |..+.+.|+.++.++..++...+++ +.+++.+++
T Consensus 7 ~~~~~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~~--------~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~ 78 (358)
T PLN00411 7 LWRREAVFLTAMLATETSVVGISTLFKVATSKGLN--------IYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSIL 78 (358)
T ss_pred hhhhccchHHHHHHHHHHHHHHHHHHHHHHHCCCC--------ccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHH
Confidence 46778888899999999999999999999876222 4447789998888777655443322 222333343
Q ss_pred -HHHHHHHHHHHHHHHhHHhhhcCchhHHHHHhhhchHHHHHHHHHH------hccccCchhhHHHHHHHHhhHHhhccC
Q 018496 89 -KYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLI------MQKRYKGYDYFLALLVTLGCSIFILFP 161 (355)
Q Consensus 89 -~~~~~~~~~~~~~~~~~~sl~~ls~~~~~i~ks~~pi~v~i~~~l~------~~~k~s~~~~ls~~li~~Gv~l~~~~~ 161 (355)
.+...+++.+....+.+.+++|+|.+...++.++.|++++++++++ +|||.+++++++++++++|+.+....+
T Consensus 79 ~~l~l~g~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~ 158 (358)
T PLN00411 79 SKIGLLGFLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYH 158 (358)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHcc
Confidence 4455666654455688999999999999999999999999999998 699999999999999999999876532
Q ss_pred CCCCC-------------C-CCCCCCCchHHHHHHHHHHHHHHHhhHHHHHHHHccCCCChhhHHHHhhHHHHHHH-HHH
Q 018496 162 SGADL-------------S-PYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLS-LSG 226 (355)
Q Consensus 162 ~~~~~-------------~-~~~~~~~~~~~G~~~~~~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~ 226 (355)
+.... + ....+..+...|.++++.++++++++++.+++..++++. .....++...++.+.. .+.
T Consensus 159 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~-~~~~t~~~~~~~~~~~~~~~ 237 (358)
T PLN00411 159 GPRVFVASSPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPA-AFTVSFLYTVCVSIVTSMIG 237 (358)
T ss_pred CcccccccccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCc-HhHHHHHHHHHHHHHHHHHH
Confidence 21100 0 000011234669999999999999999999998877643 3344444444443333 233
Q ss_pred HHHhCchHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhh
Q 018496 227 LILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIG 306 (355)
Q Consensus 227 ~~~~g~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~i~~~~~~~~si~~~~~~v~siils~~~fge~~t~~~~iG 306 (355)
...+++-...+ ....+... ..+++.++...+++.++++++++.||.++++..+++|++++++|++++||++++.+++|
T Consensus 238 l~~~~~~~~~~-~~~~~~~~-~~i~y~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG 315 (358)
T PLN00411 238 LVVEKNNPSVW-IIHFDITL-ITIVTMAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIG 315 (358)
T ss_pred HHHccCCcccc-eeccchHH-HHHHHHHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHH
Confidence 33332100100 01112222 23444455556677788899999999999999999999999999999999999999999
Q ss_pred hhHhhhhHHhhhhhccccCCCCCC
Q 018496 307 SIIVFGALYTRSFFKKVSEKPRPS 330 (355)
Q Consensus 307 ~~lv~~Gi~~~~~~k~k~~~~~~~ 330 (355)
.++++.|+++..+.|+||.++|+.
T Consensus 316 ~~LIl~Gv~l~~~~~~~~~~~~~~ 339 (358)
T PLN00411 316 GILITLGFYAVMWGKANEEKDQLL 339 (358)
T ss_pred HHHHHHHHHHHHhhhhhhhhhccc
Confidence 999999999988877766444433
No 9
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=99.96 E-value=2.3e-29 Score=221.33 Aligned_cols=284 Identities=19% Similarity=0.304 Sum_probs=220.4
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCceeehHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHH
Q 018496 18 KMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSN 97 (355)
Q Consensus 18 ~~~~~~~g~~~~~~~~~~~~e~i~~~~~~~~~~~f~~p~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (355)
+-+..+.+++.+.....+..|.+.+++.| .+ ..++++|+++-+.-.++.. .+-...+|+.|+|.|+..-..+
T Consensus 3 ~a~~ai~~vf~GCcsnvv~lE~L~~~~pg-sg------NLITFaqFlFia~eGlif~-skf~~~k~kiplk~Y~i~V~mF 74 (330)
T KOG1583|consen 3 MAAAAISLVFGGCCSNVVFLELLVRNEPG-SG------NLITFAQFLFIATEGLIFT-SKFFTVKPKIPLKDYAITVAMF 74 (330)
T ss_pred hHHHHHHHHHHhhhchHHHHHHHHHhCCC-Ce------eehHHHHHHHHHHhceeee-ccccccCCCCchhhhheehhee
Confidence 44567788888999999999999987655 23 3677888877666665432 1112345789999999888888
Q ss_pred HHHHHHhHHhhhc-CchhHHHHHhhhchHHHHHHHHHHhccccCchhhHHHHHHHHhhHHhhccCCCCCCCC------CC
Q 018496 98 ILTTTCQYEALKY-VSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSP------YS 170 (355)
Q Consensus 98 ~~~~~~~~~sl~~-ls~~~~~i~ks~~pi~v~i~~~l~~~~k~s~~~~ls~~li~~Gv~l~~~~~~~~~~~~------~~ 170 (355)
+..+.++|.++++ ++.|.++++|+..++.+|++++++.||||+.+|+.+++++.+|+++.+...++ |... ..
T Consensus 75 F~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~-d~~~~~~~l~~~ 153 (330)
T KOG1583|consen 75 FIVNVTNNYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSK-DGRSKLSGLDSG 153 (330)
T ss_pred eeeeeeccceeeecccceEEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCc-chhhhhcccccC
Confidence 8999999999998 89999999999999999999999999999999999999999999998765321 1111 00
Q ss_pred ---CCCCchHHHHHHHHHHHHHHHhhHHHHHHHHccCCCChhhHHHHhhHHHHHHHHHHHHHhCchHHHHHHhhh-----
Q 018496 171 ---KGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYH----- 242 (355)
Q Consensus 171 ---~~~~~~~~G~~~~~~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~----- 242 (355)
.+...+.+|+.++..+.+.+|..+++||++.++|+.++-|.+||+++.+.+..+ +..+|..+.+.....
T Consensus 154 ~~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Fl---f~~~div~~~~~~~~se~~~ 230 (330)
T KOG1583|consen 154 SAQSDFFWWLIGIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFL---FMGDDIVSHWRLAFKSESYL 230 (330)
T ss_pred cccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHH---HhcchHHHHHHHHhcCccee
Confidence 112245679999999999999999999999999999999999999998866542 333443332222111
Q ss_pred -------ChHHHHHHHHHHHHHHHHHHHHH----HHHhhhChHHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhhhhHhh
Q 018496 243 -------HLDCFFDVALLSTVATTSQFFIS----YTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVF 311 (355)
Q Consensus 243 -------~~~~~~~ll~~~~~~~~~~~~~~----~~i~~~~~~~~si~~~~~~v~siils~~~fge~~t~~~~iG~~lv~ 311 (355)
-|..|+. -+++++.|++.. ....+.+++|++++.++||.++.++|++.|++|+|+.+|+|..+|+
T Consensus 231 ~p~~g~~vP~~~~y----Ll~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF 306 (330)
T KOG1583|consen 231 IPLLGFKVPSMWVY----LLFNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVF 306 (330)
T ss_pred ccccCccccHHHHH----HHHHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHH
Confidence 1333433 345677775433 3468899999999999999999999999999999999999999999
Q ss_pred hhHHhh
Q 018496 312 GALYTR 317 (355)
Q Consensus 312 ~Gi~~~ 317 (355)
.|-..+
T Consensus 307 ~Gt~~f 312 (330)
T KOG1583|consen 307 FGTLLF 312 (330)
T ss_pred HHHHHH
Confidence 774433
No 10
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=99.95 E-value=6.6e-27 Score=208.77 Aligned_cols=281 Identities=14% Similarity=0.171 Sum_probs=225.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCceeehHHHHHHHHHHHHHHHHHHHHhhcCCC---CCCCchhHHH----
Q 018496 19 MIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAI---DPVAPVYKYC---- 91 (355)
Q Consensus 19 ~~~~~~g~~~~~~~~~~~~e~i~~~~~~~~~~~f~~p~~l~~~~~~~~~l~~~~~~~~~~~~~---~~~~~~~~~~---- 91 (355)
.+..+.++|++......+|++..+ .|++|++++.+|+++-.+.+....+..+++. +.+..|++++
T Consensus 17 ~L~lVl~yY~~Si~Ltf~~~~~~~--------~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~a 88 (349)
T KOG1443|consen 17 TLALVLLYYFLSIGLTFYFKWLTK--------NFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLA 88 (349)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhc--------CcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhh
Confidence 345557888888777777777653 3999999999999998888876655433222 2234566555
Q ss_pred HHHHHHHHHHHHhHHhhhcCchhHHHHHhhhchHHHHHHHHHHhccccCchhhHHHHHHHHhhHHhhccCCCCCCCCCCC
Q 018496 92 LVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSK 171 (355)
Q Consensus 92 ~~~~~~~~~~~~~~~sl~~ls~~~~~i~ks~~pi~v~i~~~l~~~~k~s~~~~ls~~li~~Gv~l~~~~~~~~~~~~~~~ 171 (355)
|++++..++..++|+|++|++.+.+++.|++.++|+.+++.++.-||++|.-.+.++++..|++++++++
T Consensus 89 Ptalata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~Ks---------- 158 (349)
T KOG1443|consen 89 PTALATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKS---------- 158 (349)
T ss_pred hhhhhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecc----------
Confidence 9999999999999999999999999999999999999999888889999999999999999999988762
Q ss_pred CCCchHHHHHHHHHHHHHHHhhHHHHHHHHccCC---CChhhHHHHhhHHHHHHHHHH-HHHhCchH----HHHHHhhhC
Q 018496 172 GRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYD---MEIHNQIFYTTLCSCVLSLSG-LILEGHLF----LAIDFVYHH 243 (355)
Q Consensus 172 ~~~~~~~G~~~~~~s~~~~a~~~v~~~~~~~~~~---~~~~~~~~~~~~~~~i~~~~~-~~~~g~~~----~~~~~~~~~ 243 (355)
++++..|..++.++.++.|+++.+.+.++++.+ .+|...+++.+++..+..+|. +.++|... +.+.+. .+
T Consensus 159 -Tqf~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~-d~ 236 (349)
T KOG1443|consen 159 -TQFNIEGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQ-DT 236 (349)
T ss_pred -cceeehhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhc-Cc
Confidence 368999999999999999999999888887654 578999999999988877765 56677532 122221 12
Q ss_pred hHHHHHHHHHHHHHHHHH---HHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhhhhHhhhhHHhhhh
Q 018496 244 LDCFFDVALLSTVATTSQ---FFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSF 319 (355)
Q Consensus 244 ~~~~~~ll~~~~~~~~~~---~~~~~~i~~~~~~~~si~~~~~~v~siils~~~fge~~t~~~~iG~~lv~~Gi~~~~~ 319 (355)
...+..+..++.++..+. .+.|..+.+++.++.++++..|.+.+.+++.++.++.++..+|.|..+...|+.++..
T Consensus 237 ~~~~rv~g~i~l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~~ 315 (349)
T KOG1443|consen 237 GLILRVIGLISLGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHRN 315 (349)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhcc
Confidence 234544444555554444 4566788999999999999999999999999999999999999999999999988743
No 11
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.95 E-value=6.3e-25 Score=205.44 Aligned_cols=267 Identities=15% Similarity=0.158 Sum_probs=199.9
Q ss_pred ceeehHHHHHHHHHHHHHHHHHHHHhhcCCC----CCCCchhHHHHHHHHHHHHHHHhHHhhhcCchhHHHHHhhhchHH
Q 018496 51 YFKYSLFLVFCNRLMTSAVSAGTLIASRKAI----DPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIP 126 (355)
Q Consensus 51 ~f~~p~~l~~~~~~~~~l~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~sl~~ls~~~~~i~ks~~pi~ 126 (355)
+++.|.+-++...+.-.++-......|+++. ..+.++|+|+.++++.+.++.+.+.|++|+|.+..+++.++..++
T Consensus 39 ~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~ 118 (334)
T PF06027_consen 39 GVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPF 118 (334)
T ss_pred CccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHH
Confidence 3667887777766554433323333333211 124678999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccccCchhhHHHHHHHHhhHHhhccCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHhhHHHHHHHHccCCC
Q 018496 127 VMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDM 206 (355)
Q Consensus 127 v~i~~~l~~~~k~s~~~~ls~~li~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~~~~~s~~~~a~~~v~~~~~~~~~~~ 206 (355)
+++++++++|+|+++.|+++++++++|+.+....|.... +...+.++...|.++++++++++|++++++|+..|+.
T Consensus 119 ~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~--~~~~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~-- 194 (334)
T PF06027_consen 119 VMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSG--SDSSSGSNPILGDLLALLGAILYAVSNVLEEKLVKKA-- 194 (334)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeeccccc--ccCCCCCccchhHHHHHHHHHHHHHHHHHHHHhcccC--
Confidence 999999999999999999999999999998876642111 1111245779999999999999999999999999865
Q ss_pred ChhhHHHHhhHHHHHHHHHHHH-HhCchHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHH
Q 018496 207 EIHNQIFYTTLCSCVLSLSGLI-LEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQL 285 (355)
Q Consensus 207 ~~~~~~~~~~~~~~i~~~~~~~-~~g~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~i~~~~~~~~si~~~~~~v 285 (355)
+..+.+....+++.++..+... ++.+-.+ -.+.+.+.+..++.++++-.......-..++..||+..++-..+-.+
T Consensus 195 ~~~~~lg~~Glfg~ii~~iq~~ile~~~i~---~~~w~~~~~~~~v~~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~ 271 (334)
T PF06027_consen 195 PRVEFLGMLGLFGFIISGIQLAILERSGIE---SIHWTSQVIGLLVGYALCLFLFYSLVPIVLRMSSATFFNLSLLTSDF 271 (334)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHheehhhhh---ccCCChhhHHHHHHHHHHHHHHHHHHHHHHHhCccceeehHHHHhhH
Confidence 5678888888999888776543 3322111 12223333333222333322222333446899999999999999999
Q ss_pred HHHHHHHHHcCCCCchhhhhhhhHhhhhHHhhhhhcccc
Q 018496 286 VSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVS 324 (355)
Q Consensus 286 ~siils~~~fge~~t~~~~iG~~lv~~Gi~~~~~~k~k~ 324 (355)
.++++++++||+++++..++|.++|+.|++++....++.
T Consensus 272 ~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~~ 310 (334)
T PF06027_consen 272 YALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESPE 310 (334)
T ss_pred HHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCcc
Confidence 999999999999999999999999999998887765443
No 12
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.92 E-value=4.5e-22 Score=185.74 Aligned_cols=283 Identities=12% Similarity=0.065 Sum_probs=209.0
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCceeehHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHH
Q 018496 14 SRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLV 93 (355)
Q Consensus 14 ~~~~~~~~~~~g~~~~~~~~~~~~e~i~~~~~~~~~~~f~~p~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (355)
++-+.+.++.....+.+....+.-|..... . .|..+++.|++++.++..+....+|++.+++..++.....
T Consensus 4 ~~~~~~~~~~~~~~~iWg~~~~~~K~~~~~-~--------~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~ 74 (292)
T PRK11272 4 RQLLPLFGALFALYIIWGSTYLVIRIGVES-W--------PPLMMAGVRFLIAGILLLAFLLLRGHPLPTLRQWLNAALI 74 (292)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHhcc-C--------CHHHHHHHHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHH
Confidence 344556677777788888888777766531 2 2788999999998887766555544332333345555666
Q ss_pred HHHH-HHHHHHhHHhh-hcCchhHHHHHhhhchHHHHHHHHHHhccccCchhhHHHHHHHHhhHHhhccCCCCCCCCCCC
Q 018496 94 SMSN-ILTTTCQYEAL-KYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSK 171 (355)
Q Consensus 94 ~~~~-~~~~~~~~~sl-~~ls~~~~~i~ks~~pi~v~i~~~l~~~~k~s~~~~ls~~li~~Gv~l~~~~~~~~~~~~~~~ 171 (355)
|.+. .....+.+.+. ++++.+...++.++.|+++++++.+ +|||+++++++++++.++|+.+...++ +
T Consensus 75 g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~---~------ 144 (292)
T PRK11272 75 GLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGG---N------ 144 (292)
T ss_pred HHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCc---c------
Confidence 7664 45667778888 8999988889999999999999975 799999999999999999998875331 1
Q ss_pred CCCchHHHHHHHHHHHHHHHhhHHHHHHHHccCCCChhhHHHHhhHHHHHHHHHHHHHhCchHHHHHHhhhChHHHHHHH
Q 018496 172 GRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVA 251 (355)
Q Consensus 172 ~~~~~~~G~~~~~~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~ll 251 (355)
.+.+..|.++.+++.++++.+++..++..++ ++.....+....+.+...+.....++.. ....++..|..++
T Consensus 145 -~~~~~~G~l~~l~a~~~~a~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~ 216 (292)
T PRK11272 145 -LSGNPWGAILILIASASWAFGSVWSSRLPLP---VGMMAGAAEMLAAGVVLLIASLLSGERL----TALPTLSGFLALG 216 (292)
T ss_pred -cccchHHHHHHHHHHHHHHHHHHHHHhcCCC---cchHHHHHHHHHHHHHHHHHHHHcCCcc----cccCCHHHHHHHH
Confidence 1234679999999999999999998886432 2233445555555555555443332211 0112334566666
Q ss_pred HHHHH-HHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhhhhHhhhhHHhhhhhccc
Q 018496 252 LLSTV-ATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKV 323 (355)
Q Consensus 252 ~~~~~-~~~~~~~~~~~i~~~~~~~~si~~~~~~v~siils~~~fge~~t~~~~iG~~lv~~Gi~~~~~~k~k 323 (355)
+.++. +.++..++++++++.++.+.++...++|+++.+++++++||++++.+++|.++++.|+++..+.++|
T Consensus 217 ~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~~ 289 (292)
T PRK11272 217 YLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKYL 289 (292)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHhh
Confidence 66654 5677788889999999999999999999999999999999999999999999999998887665543
No 13
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.92 E-value=5.2e-23 Score=186.39 Aligned_cols=278 Identities=15% Similarity=0.150 Sum_probs=215.1
Q ss_pred HHHHHHHHhhhhcccCCCCCCCceeehHHHHHHHHHHHHHHHHHHHHhhcCCCC--CCCchhHHHHHHHHHHHHHHHhHH
Q 018496 29 TLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAID--PVAPVYKYCLVSMSNILTTTCQYE 106 (355)
Q Consensus 29 ~~~~~~~~~e~i~~~~~~~~~~~f~~p~~l~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 106 (355)
+...-.+.||.+... | +||...++...|.+++.++.+...+.+--+.+ .+...|+++|+++.+.+....+-.
T Consensus 23 sS~lm~vvNK~vls~-y-----~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf~~~i~t~~~ 96 (314)
T KOG1444|consen 23 SSILMTVVNKIVLSS-Y-----NFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLFVGMLFTGSK 96 (314)
T ss_pred HHHHHHHHHHHHHhc-C-----CCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHHHHHHHHccc
Confidence 333455567777643 2 35555555559999888776554332211111 234557899999999999999999
Q ss_pred hhhcCchhHHHHHhhhchHHHHHHHHHHhccccCchhhHHHHHHHHhhHHhhccCCCCCCCCCCCCCCchHHHHHHHHHH
Q 018496 107 ALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGY 186 (355)
Q Consensus 107 sl~~ls~~~~~i~ks~~pi~v~i~~~l~~~~k~s~~~~ls~~li~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~~~~~s 186 (355)
+++|+++|+++++|...|+.+++.+.+++|+|+++..|.++..+.+|....... | ..++..|+.++..+
T Consensus 97 slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~----d-------~sf~~~gY~w~~~n 165 (314)
T KOG1444|consen 97 SLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFT----D-------LSFNLRGYSWALAN 165 (314)
T ss_pred cccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccc----c-------ceecchhHHHHHHH
Confidence 999999999999999999999999999999999999999999999999876654 2 24677799999999
Q ss_pred HHHHHhhHHHHHHHHccCCCChhhHHHHhhHHHHHHHHHHHHHhCchHHHHHHh---hhChHHHHHHHHHHHHHHHHHHH
Q 018496 187 LGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFV---YHHLDCFFDVALLSTVATTSQFF 263 (355)
Q Consensus 187 ~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~~~~~~~~~---~~~~~~~~~ll~~~~~~~~~~~~ 263 (355)
++..+.+.++.|+..+..+.+.+++++|.++++.+......+++||+. +..+. ..++..+..+.+.++++....++
T Consensus 166 ~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~-~l~~~~~~~~~~~~~~~~~lScv~gf~isy~ 244 (314)
T KOG1444|consen 166 CLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELD-ALSLNFDNWSDSSVLVVMLLSCVMGFGISYT 244 (314)
T ss_pred HHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchH-HHHhhcccccchhHHHHHHHHHHHHHHHHHH
Confidence 999999999999888777778899999999999999888888888865 43332 12345676777778888888889
Q ss_pred HHHHHhhhChHHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhhhhHhhhhHHhhhhhcccc
Q 018496 264 ISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVS 324 (355)
Q Consensus 264 ~~~~i~~~~~~~~si~~~~~~v~siils~~~fge~~t~~~~iG~~lv~~Gi~~~~~~k~k~ 324 (355)
.+.|.+..|+++.++++...+..+.+...+++|+++++.+.+|+.+-+.|=..|.+.+.+|
T Consensus 245 s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~ 305 (314)
T KOG1444|consen 245 SFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRK 305 (314)
T ss_pred HHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhh
Confidence 9999999999999999955555555555555667999999999999664434445554433
No 14
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.91 E-value=4.9e-22 Score=185.78 Aligned_cols=280 Identities=11% Similarity=-0.040 Sum_probs=191.1
Q ss_pred HHHHHHHHHHHHHHHHhhhhcccCCCCCCCceeehHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHH
Q 018496 21 FAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILT 100 (355)
Q Consensus 21 ~~~~g~~~~~~~~~~~~e~i~~~~~~~~~~~f~~p~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (355)
++.....+++...-...|..... .+ |..+.+.|+..+.++..+.. +++ +.++.+++..+..++..+..
T Consensus 7 l~~l~a~~~Wg~~~~~~k~~~~~-~~--------P~~~~~~R~~~a~l~l~~~~--~~~-~~~~~~~~~~~~~~l~~~~~ 74 (295)
T PRK11689 7 LIGLIAILLWSTMVGLIRGVSES-LG--------PVGGAAMIYSVSGLLLLLTV--GFP-RLRQFPKRYLLAGGLLFVSY 74 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcc-CC--------hHHHHHHHHHHHHHHHHHHc--ccc-ccccccHHHHHHHhHHHHHH
Confidence 34445555666665666665432 22 88889999988887765432 121 12222333334434445566
Q ss_pred HHHhHHhhhc----CchhHHHHHhhhchHHHHHHHHHHhccccCchhhHHHHHHHHhhHHhhccCCCCCCCCCCCCCCch
Q 018496 101 TTCQYEALKY----VSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENT 176 (355)
Q Consensus 101 ~~~~~~sl~~----ls~~~~~i~ks~~pi~v~i~~~l~~~~k~s~~~~ls~~li~~Gv~l~~~~~~~~~~~~~~~~~~~~ 176 (355)
..+.+.+++| ++.....++.++.|+++++++++++|||+++++++++++.++|++++...+.+.+..+...+..++
T Consensus 75 ~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~ 154 (295)
T PRK11689 75 EICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASN 154 (295)
T ss_pred HHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccC
Confidence 6777778765 454556677889999999999999999999999999999999998876432100000000001234
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHccCCCChhhHHHHhhHHHHHHHHHHHHHhCchHHHHHHhhhChHHHHHHHHHHHH
Q 018496 177 VWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTV 256 (355)
Q Consensus 177 ~~G~~~~~~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~ll~~~~~ 256 (355)
..|.++++.++++++.++++.||..+++ ++....+ ..+.+...+....+++. ....+++.|..+++.++.
T Consensus 155 ~~G~~~~l~aa~~~A~~~v~~k~~~~~~--~~~~~~~---~~~~~~l~~~~~~~~~~-----~~~~~~~~~~~l~~~~~~ 224 (295)
T PRK11689 155 PLSYGLAFIGAFIWAAYCNVTRKYARGK--NGITLFF---ILTALALWIKYFLSPQP-----AMVFSLPAIIKLLLAAAA 224 (295)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhccCCC--CchhHHH---HHHHHHHHHHHHHhcCc-----cccCCHHHHHHHHHHHHH
Confidence 5799999999999999999999976544 3433322 12222222222222221 111234556666666777
Q ss_pred HHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhhhhHhhhhHHhhhhhcc
Q 018496 257 ATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKK 322 (355)
Q Consensus 257 ~~~~~~~~~~~i~~~~~~~~si~~~~~~v~siils~~~fge~~t~~~~iG~~lv~~Gi~~~~~~k~ 322 (355)
+.+++.++++++++.+|.++++..+++|+++++++++++||++++.+++|.++++.|+++.....|
T Consensus 225 t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~~~ 290 (295)
T PRK11689 225 MGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLATR 290 (295)
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhhHh
Confidence 778889999999999999999999999999999999999999999999999999999877765444
No 15
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.91 E-value=1.3e-21 Score=182.96 Aligned_cols=276 Identities=8% Similarity=-0.001 Sum_probs=189.2
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCceeehHHHHHHHHHHHHHHHHHHHHhhcCCCC---CCCchh
Q 018496 12 KDSRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAID---PVAPVY 88 (355)
Q Consensus 12 ~~~~~~~~~~~~~g~~~~~~~~~~~~e~i~~~~~~~~~~~f~~p~~l~~~~~~~~~l~~~~~~~~~~~~~~---~~~~~~ 88 (355)
|+++..+..+......+++...++..|... +.+ |..+++.|++++.++...+...+++..+ +..+++
T Consensus 2 ~~~~~~~g~~~~l~a~~~wg~~~~~~k~~~--~~~--------~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~ 71 (296)
T PRK15430 2 DAKQTRQGVLLALAAYFIWGIAPAYFKLIY--YVP--------ADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQ 71 (296)
T ss_pred CchhhhhHHHHHHHHHHHHHHHHHHHHHhc--CCC--------HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHH
Confidence 455667777777777888888888887652 223 7889999999988765444433322111 011222
Q ss_pred H--HHHHH-HHHHHHHHHhHHhhhcCchhHHHHHhhhchHHHHHHHHHHhccccCchhhHHHHHHHHhhHHhhccCCCCC
Q 018496 89 K--YCLVS-MSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGAD 165 (355)
Q Consensus 89 ~--~~~~~-~~~~~~~~~~~~sl~~ls~~~~~i~ks~~pi~v~i~~~l~~~~k~s~~~~ls~~li~~Gv~l~~~~~~~~~ 165 (355)
+ ....+ +.......+.+.++++++.+...++.++.|+++++++++++|||+++++++++++.++|+.++... +
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~----~ 147 (296)
T PRK15430 72 KIFMLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWT----F 147 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHH----c
Confidence 2 22233 445667899999999999999999999999999999999999999999999999999999987532 1
Q ss_pred CCCCCCCCCchHHHHHHHHHHHHHHHhhHHHHHHHHccCCCChhhHHHHhhHHHHHHHHHHHHHhCchHHHHHHhhhChH
Q 018496 166 LSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLD 245 (355)
Q Consensus 166 ~~~~~~~~~~~~~G~~~~~~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~ 245 (355)
.+.. .+.++++++++.+.+.+++..++...+......+..+++.+...+ ..+... .....++.
T Consensus 148 -------~~~~----~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~----~~~~~~~~ 210 (296)
T PRK15430 148 -------GSLP----IIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFA--IADSST----SHMGQNPM 210 (296)
T ss_pred -------CCcc----HHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHH--HccCCc----ccccCCcH
Confidence 0111 346667899999999888754321111122222222222222111 111110 00112222
Q ss_pred H-HHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhhhhHhhhhHHhhh
Q 018496 246 C-FFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRS 318 (355)
Q Consensus 246 ~-~~~ll~~~~~~~~~~~~~~~~i~~~~~~~~si~~~~~~v~siils~~~fge~~t~~~~iG~~lv~~Gi~~~~ 318 (355)
. +..+++.++.+.+++.++++++++.+|.++++..+++|+++++++++++||++++.+++|+++++.|+....
T Consensus 211 ~~~~~~~~~g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~ 284 (296)
T PRK15430 211 SLNLLLIAAGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFV 284 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence 2 223333455677889999999999999999999999999999999999999999999999999987655443
No 16
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=99.91 E-value=7.8e-21 Score=178.01 Aligned_cols=278 Identities=12% Similarity=0.145 Sum_probs=193.8
Q ss_pred HHHHHHHHHHHHHHHhhhhcccCCCCCCCceeehHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHH-HHH
Q 018496 22 AVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSN-ILT 100 (355)
Q Consensus 22 ~~~g~~~~~~~~~~~~e~i~~~~~~~~~~~f~~p~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 100 (355)
+......++.......|..... . .|..+++.|+.++.+...... +++ +.+++..+..++.. ...
T Consensus 8 ~~l~~~~~Wg~~~~~~k~~~~~-~--------~p~~~~~~R~~~a~~~l~~~~--~~~----~~~~~~~~~~g~~~~~~~ 72 (299)
T PRK11453 8 LALLVVVVWGLNFVVIKVGLHN-M--------PPLMLAGLRFMLVAFPAIFFV--ARP----KVPLNLLLGYGLTISFGQ 72 (299)
T ss_pred HHHHHHHHHhhhHHHHHHHHhc-C--------CHHHHHHHHHHHHHHHHHHHh--cCC----CCchHHHHHHHHHHHHHH
Confidence 3445566666766666665421 2 288899999888665443322 221 12344455555543 334
Q ss_pred HHHhHHhhhc-CchhHHHHHhhhchHHHHHHHHHHhccccCchhhHHHHHHHHhhHHhhccCCCCCCCCCCCCCCchHHH
Q 018496 101 TTCQYEALKY-VSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWG 179 (355)
Q Consensus 101 ~~~~~~sl~~-ls~~~~~i~ks~~pi~v~i~~~l~~~~k~s~~~~ls~~li~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G 179 (355)
..+.+.+++| ++.+...++.++.|+++++++++++|||+++++++++++.++|+.++...+ . + +.+.+..|
T Consensus 73 ~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~---~-~----~~~~~~~G 144 (299)
T PRK11453 73 FAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDS---L-N----GQHVAMLG 144 (299)
T ss_pred HHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhcccc---C-C----CcchhHHH
Confidence 4566788887 677788888889999999999999999999999999999999998876331 1 1 11334679
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHccCCC-ChhhHHHHhhHHHHHHHHHH-HHHhCchHHHHHHhhhChHHHHHHHHHHHH-
Q 018496 180 VSLMVGYLGFDGFTSTFQDKLFKGYDM-EIHNQIFYTTLCSCVLSLSG-LILEGHLFLAIDFVYHHLDCFFDVALLSTV- 256 (355)
Q Consensus 180 ~~~~~~s~~~~a~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~-~~~~g~~~~~~~~~~~~~~~~~~ll~~~~~- 256 (355)
+++++.+.++++.+++++++..++++. .......+....+.+..... ...+++..........++..|..++++++.
T Consensus 145 ~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i~~ 224 (299)
T PRK11453 145 FMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVA 224 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHHHH
Confidence 999999999999999999997655431 22222333333332222221 122332111011112345567777777654
Q ss_pred HHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhhhhHhhhhHHhhhhhcc
Q 018496 257 ATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKK 322 (355)
Q Consensus 257 ~~~~~~~~~~~i~~~~~~~~si~~~~~~v~siils~~~fge~~t~~~~iG~~lv~~Gi~~~~~~k~ 322 (355)
+.+++.+++..+++.+|.+.+++..++|+++.+++++++||++++.+++|.++++.|+++..+.++
T Consensus 225 t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~~ 290 (299)
T PRK11453 225 TIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGLR 290 (299)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcchh
Confidence 556777888899999999999999999999999999999999999999999999999988877665
No 17
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.90 E-value=1.6e-21 Score=178.61 Aligned_cols=242 Identities=15% Similarity=0.096 Sum_probs=188.2
Q ss_pred eehHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHH-HHHHHHHhHHhhhcCchhHHHHHhhhchHHHHHHH
Q 018496 53 KYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMS-NILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWG 131 (355)
Q Consensus 53 ~~p~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~sl~~ls~~~~~i~ks~~pi~v~i~~ 131 (355)
..|..+.+.|.+++.++..+....+ +++.+++.++..+.+ ..+...+.+.|++|++.+...++.++.|+++++++
T Consensus 16 ~~~~~~~~~r~~~~~l~l~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~ii~~~~P~~~~~~~ 91 (260)
T TIGR00950 16 VPLYFAVFRRLIFALLLLLPLLRRR----PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEAALLLYLAPLYVTLLS 91 (260)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhc----cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHhhhHHHHHHHH
Confidence 3477888889888877765543332 223345555666654 56777899999999999999999999999999999
Q ss_pred HHHhccccCchhhHHHHHHHHhhHHhhccCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHhhHHHHHHHHccCCCChhhH
Q 018496 132 TLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQ 211 (355)
Q Consensus 132 ~l~~~~k~s~~~~ls~~li~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~~~~~s~~~~a~~~v~~~~~~~~~~~~~~~~ 211 (355)
.+++|||++++++.+++++++|+.+....+ + .+.+..|+.+++.+.++++.+.+..|+..++.+.++...
T Consensus 92 ~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~---~-------~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~ 161 (260)
T TIGR00950 92 DLMGKERPRKLVLLAAVLGLAGAVLLLSDG---N-------LSINPAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQF 161 (260)
T ss_pred HHHccCCCcHHHHHHHHHHHHhHHhhccCC---c-------ccccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHH
Confidence 999999999999999999999998875331 1 134578999999999999999999999877665444444
Q ss_pred HHHhhHHHHHHHHHHHHHhCchHHHHHHhhhChHHHHHHHHHHHH-HHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHH
Q 018496 212 IFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTV-ATTSQFFISYTIRTFGALTFATIMTTRQLVSIVL 290 (355)
Q Consensus 212 ~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~ll~~~~~-~~~~~~~~~~~i~~~~~~~~si~~~~~~v~siil 290 (355)
..+...++.+...+.....++.. ..++..|..+++.+.. +.+++.++++++++.++.+++++.+++|+++.++
T Consensus 162 ~~~~~~~~~~~l~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll 235 (260)
T TIGR00950 162 TGWVLLLGALLLLPFAWFLGPNP------QALSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLL 235 (260)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCC------CcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHH
Confidence 44556677777666654443211 1133345455555554 4678888999999999999999999999999999
Q ss_pred HHHHcCCCCchhhhhhhhHhhhhH
Q 018496 291 SCVWFRHPLSWEQCIGSIIVFGAL 314 (355)
Q Consensus 291 s~~~fge~~t~~~~iG~~lv~~Gi 314 (355)
+++++||++++.+++|..+++.|+
T Consensus 236 ~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 236 GLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHhCCCCCHHHHHHHHHHHHhc
Confidence 999999999999999999999885
No 18
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.89 E-value=1.9e-20 Score=174.95 Aligned_cols=275 Identities=10% Similarity=0.040 Sum_probs=195.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCceeehHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHH
Q 018496 16 VLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSM 95 (355)
Q Consensus 16 ~~~~~~~~~g~~~~~~~~~~~~e~i~~~~~~~~~~~f~~p~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (355)
+++-......-.+++...+...|....+ .+ |..+.+.|++.+.++..+....+++ ..++..++..+..|+
T Consensus 10 ~~~~~~~~~la~~~~~~~~~~~K~~~~~-~~--------~~~~~~~R~~~a~l~l~~~~~~~~~-~~~~~~~~~~~~~g~ 79 (293)
T PRK10532 10 VWLPILLLLIAMASIQSGASLAKSLFPL-VG--------APGVTALRLALGTLILIAIFKPWRL-RFAKEQRLPLLFYGV 79 (293)
T ss_pred cchHHHHHHHHHHHHHhhHHHHHHHHHH-cC--------HHHHHHHHHHHHHHHHHHHHhHHhc-cCCHHHHHHHHHHHH
Confidence 3555666666677777777777777642 23 6678999999988777654333222 222345556667787
Q ss_pred HHHHHHHHhHHhhhcCchhHHHHHhhhchHHHHHHHHHHhccccCchhhHHHHHHHHhhHHhhccCCCCCCCCCCCCCCc
Q 018496 96 SNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGREN 175 (355)
Q Consensus 96 ~~~~~~~~~~~sl~~ls~~~~~i~ks~~pi~v~i~~~l~~~~k~s~~~~ls~~li~~Gv~l~~~~~~~~~~~~~~~~~~~ 175 (355)
+......+.+.+++|++.+..+++..+.|+++++++ +||.++ ...+.+.++|+.++.... . + ..+.
T Consensus 80 ~~~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~----~~~~~~--~~~~~i~~~Gv~li~~~~---~-~----~~~~ 145 (293)
T PRK10532 80 SLGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFS----SRRPVD--FVWVVLAVLGLWFLLPLG---Q-D----VSHV 145 (293)
T ss_pred HHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHh----cCChHH--HHHHHHHHHHHheeeecC---C-C----cccC
Confidence 777778888999999999999888899999998765 355544 445667789988765321 1 0 0134
Q ss_pred hHHHHHHHHHHHHHHHhhHHHHHHHHccCCCChhhHHHHhhHHHHHHHHHHHHHhCchHHHHHHhhhChHHHHHHHHHHH
Q 018496 176 TVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLST 255 (355)
Q Consensus 176 ~~~G~~~~~~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~ll~~~~ 255 (355)
+..|.++.+.+.++++.+.+..++..+++ ++... .+...++.+...+.....++. ...++..|..++++++
T Consensus 146 ~~~G~ll~l~aa~~~a~~~v~~r~~~~~~--~~~~~-~~~~~~~~~~l~~~~~~~~~~------~~~~~~~~~~~l~lgv 216 (293)
T PRK10532 146 DLTGAALALGAGACWAIYILSGQRAGAEH--GPATV-AIGSLIAALIFVPIGALQAGE------ALWHWSILPLGLAVAI 216 (293)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhccC--CchHH-HHHHHHHHHHHHHHHHHccCc------ccCCHHHHHHHHHHHH
Confidence 56899999999999999999999887654 34343 444556655555554433220 0123334444455665
Q ss_pred H-HHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhhhhHhhhhHHhhhhhccc
Q 018496 256 V-ATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKV 323 (355)
Q Consensus 256 ~-~~~~~~~~~~~i~~~~~~~~si~~~~~~v~siils~~~fge~~t~~~~iG~~lv~~Gi~~~~~~k~k 323 (355)
. +.+++.++++++++.+|.++++..+++|+++++++++++||++++.+++|.+++++|.....+.++|
T Consensus 217 ~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~~ 285 (293)
T PRK10532 217 LSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIRR 285 (293)
T ss_pred HHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCCC
Confidence 4 4556668889999999999999999999999999999999999999999999999988777665443
No 19
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.85 E-value=1.9e-22 Score=177.57 Aligned_cols=294 Identities=16% Similarity=0.142 Sum_probs=225.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcccCCCCCCCceeehHHHHHHHHHHHHHHHHHHHHhhcCC----CCCCC-----chhHH
Q 018496 20 IFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKA----IDPVA-----PVYKY 90 (355)
Q Consensus 20 ~~~~~g~~~~~~~~~~~~e~i~~~~~~~~~~~f~~p~~l~~~~~~~~~l~~~~~~~~~~~~----~~~~~-----~~~~~ 90 (355)
...+.-...+.....+.+|.++.. ++-..+.|.|+++.||+++..++...-...++. ..+.. ..++.
T Consensus 30 ~~~vs~ywv~SI~~vf~nk~llss----~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~v 105 (347)
T KOG1442|consen 30 DSAVSLYWVTSIGLVFLNKHLLSS----LVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQV 105 (347)
T ss_pred hhhccceeeeeehhhhhHHHHhhc----hhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhh
Confidence 334444455555666677777643 345678899999999999998886553322111 11111 23578
Q ss_pred HHHHHHHHHHHHHhHHhhhcCchhHHHHHhhhchHHHHHHHHHHhccccCchhhHHHHHHHHhhHHhhccCCCCCCCCCC
Q 018496 91 CLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYS 170 (355)
Q Consensus 91 ~~~~~~~~~~~~~~~~sl~~ls~~~~~i~ks~~pi~v~i~~~l~~~~k~s~~~~ls~~li~~Gv~l~~~~~~~~~~~~~~ 170 (355)
++.++.+.+...++|.+|+|++++.+.+.|+...+|+.++.++++|+|-+..-..+++++++|-.+-. |+++.
T Consensus 106 lplsvVfi~mI~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGv------dqE~~- 178 (347)
T KOG1442|consen 106 LPLSVVFILMISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGV------DQEGS- 178 (347)
T ss_pred cchhheeeeehhccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheecc------ccccc-
Confidence 89999999999999999999999999999999999999999999999999999999999999965422 22211
Q ss_pred CCCCchHHHHHHHHHHHHHHHhhHHHHHHHHccCCCChhhHHHHhhHHHHHHHHHHHHHhCchHHHHHHhhh-ChHHHHH
Q 018496 171 KGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYH-HLDCFFD 249 (355)
Q Consensus 171 ~~~~~~~~G~~~~~~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~-~~~~~~~ 249 (355)
....++.|.++.+.+.++-|+..++.++.+..-+...+.+.+|+|..++++.+|.+++.||+++-+.|.+. ....|..
T Consensus 179 -~~~ls~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~ 257 (347)
T KOG1442|consen 179 -TGTLSWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWIL 257 (347)
T ss_pred -cCccchhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHH
Confidence 13678999999999999999999998877655555679999999999999999999999998876655333 2234444
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhhhhHhhhhHHhhhhhccccC
Q 018496 250 VALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSE 325 (355)
Q Consensus 250 ll~~~~~~~~~~~~~~~~i~~~~~~~~si~~~~~~v~siils~~~fge~~t~~~~iG~~lv~~Gi~~~~~~k~k~~ 325 (355)
+.+.+++|+...+.-..-+|.+||+|+.+-++.|.....++++.+++|.-+..-|-|-.++++|-..+.+.|+.+.
T Consensus 258 mtLsglfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em 333 (347)
T KOG1442|consen 258 MTLSGLFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEM 333 (347)
T ss_pred HHHHHHHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHH
Confidence 4333444433333323348999999999999999999999999999999999999999999988766666665443
No 20
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.82 E-value=3.7e-18 Score=158.51 Aligned_cols=267 Identities=11% Similarity=0.069 Sum_probs=176.1
Q ss_pred HHHHHHHHHHHHHHHhhhhcccCCCCCCCceeehHHHHHHHHHHHHHHHHHHHHhh--cCCCC-CCCchhHH-HHHHHHH
Q 018496 22 AVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIAS--RKAID-PVAPVYKY-CLVSMSN 97 (355)
Q Consensus 22 ~~~g~~~~~~~~~~~~e~i~~~~~~~~~~~f~~p~~l~~~~~~~~~l~~~~~~~~~--~~~~~-~~~~~~~~-~~~~~~~ 97 (355)
.......++..+.++.|+..+++ .+. .+.......++..+....+ ++..+ ++..++.+ +..++..
T Consensus 5 ~~~~aa~~~a~~~~~~k~~~~~~---------~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (281)
T TIGR03340 5 LVVFSALMHAGWNLMAKSHADKE---------PDF--LWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVAN 73 (281)
T ss_pred HHHHHHHHHHHHHHHHhhcCCch---------hHH--HHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHH
Confidence 34455677888888888775431 121 2333334443333332222 11111 12223333 3444456
Q ss_pred HHHHHHhHHhhhcCchhHHHHHhhhchHHHHHHHHHHhccccCchhhHHHHHHHHhhHHhhccCCCCCCCCCCCCCCchH
Q 018496 98 ILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTV 177 (355)
Q Consensus 98 ~~~~~~~~~sl~~ls~~~~~i~ks~~pi~v~i~~~l~~~~k~s~~~~ls~~li~~Gv~l~~~~~~~~~~~~~~~~~~~~~ 177 (355)
.....+.+.++++.+.+....+.++.|+++.+++++++|||+++++++++.+++.|+.+....+ + ...+.
T Consensus 74 ~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~---~-------~~~~~ 143 (281)
T TIGR03340 74 MVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSR---F-------AQHRR 143 (281)
T ss_pred HHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhccc---c-------cccch
Confidence 7788899999999999998888899999999999999999999999999999999999876431 1 11234
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHccCCCChhhHHHHhhHHHHHHH-HHHHHH---hCchHHHHHHhhhChHHHHHHHHH
Q 018496 178 WGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLS-LSGLIL---EGHLFLAIDFVYHHLDCFFDVALL 253 (355)
Q Consensus 178 ~G~~~~~~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~---~g~~~~~~~~~~~~~~~~~~ll~~ 253 (355)
.|..+.+.++++++.+.+..|+..++.+. ......+. .++.+.. .+.... .++. .. ...+..+..+++.
T Consensus 144 ~g~~~~l~aal~~a~~~i~~k~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~ 216 (281)
T TIGR03340 144 KAYAWALAAALGTAIYSLSDKAAALGVPA-FYSALGYL-GIGFLAMGWPFLLLYLKRHGR----SM-FPYARQILPSATL 216 (281)
T ss_pred hHHHHHHHHHHHHHHhhhhccccccchhc-ccccHHHH-HHHHHHHHHHHHHHHHHHhcc----ch-hhhHHHHHHHHHH
Confidence 67778889999999999877664332221 11222222 1222221 222211 1110 00 0111122233333
Q ss_pred -HHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhhhhHhhhhHHh
Q 018496 254 -STVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYT 316 (355)
Q Consensus 254 -~~~~~~~~~~~~~~i~~~~~~~~si~~~~~~v~siils~~~fge~~t~~~~iG~~lv~~Gi~~ 316 (355)
++++.+++.++++++++.++.+.+...+++|+++++++++++||+++..+++|.++++.|++.
T Consensus 217 ~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 217 GGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred HHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 455677888899999999999999999999999999999999999999999999999999764
No 21
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.80 E-value=5.3e-18 Score=153.46 Aligned_cols=221 Identities=16% Similarity=0.265 Sum_probs=172.4
Q ss_pred chhHHHHHHHHHHHHHHHhHHhhhcCchhHHHHHhhhchHHHHHHHHHHhccccCchhhHHHHHHHHhhHHhhccCCCCC
Q 018496 86 PVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGAD 165 (355)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~sl~~ls~~~~~i~ks~~pi~v~i~~~l~~~~k~s~~~~ls~~li~~Gv~l~~~~~~~~~ 165 (355)
...++...+++|+..+.+.+.++++++.+++++++.++++++++++++++|||.+++||.++++.++|+.+....+...+
T Consensus 16 ~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~~ 95 (244)
T PF04142_consen 16 DTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQSS 95 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcccc
Confidence 34567888999999999999999999999999999999999999999999999999999999999999999866532221
Q ss_pred CCCCCC------CCCchHHHHHHHHHHHHHHHhhHHHHHHHHccCCCChhhHHHHhhHHHHHHHHHHHHHh-CchHHHHH
Q 018496 166 LSPYSK------GRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILE-GHLFLAID 238 (355)
Q Consensus 166 ~~~~~~------~~~~~~~G~~~~~~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-g~~~~~~~ 238 (355)
...... +......|+++++.+++++|+.+++.|+++|+.+.+.+......+.++.++.++..... ++......
T Consensus 96 ~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~~~g 175 (244)
T PF04142_consen 96 DNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLLSDGSAISESG 175 (244)
T ss_pred ccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhcccccccccCC
Confidence 100000 12345799999999999999999999999999887777777777888888876654332 22111111
Q ss_pred Hhhh-ChHHHHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhhhhHh
Q 018496 239 FVYH-HLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIV 310 (355)
Q Consensus 239 ~~~~-~~~~~~~ll~~~~~~~~~~~~~~~~i~~~~~~~~si~~~~~~v~siils~~~fge~~t~~~~iG~~lv 310 (355)
+.+. ++..|.. .+..+++-+.....+|+.+...-+....+..+++.++++++||.+++....+|..+|
T Consensus 176 ~f~G~~~~~~~~----i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~V 244 (244)
T PF04142_consen 176 FFHGYSWWVWIV----IFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAALV 244 (244)
T ss_pred chhhcchHHHHH----HHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheecC
Confidence 2222 2222322 233445556777899999999999999999999999999999999999999998764
No 22
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=99.80 E-value=5e-17 Score=149.68 Aligned_cols=231 Identities=15% Similarity=0.261 Sum_probs=179.8
Q ss_pred HHHHHHHHHHHHHHHhHHhhhcCchhHHHHHhhhchHHHHHHHHHHhccccCchhhHHHHHHHHhhHHhhccCCCCCCCC
Q 018496 89 KYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSP 168 (355)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~sl~~ls~~~~~i~ks~~pi~v~i~~~l~~~~k~s~~~~ls~~li~~Gv~l~~~~~~~~~~~~ 168 (355)
+....++.|...+-+.+.++.+++.+++++....+.+.++++..+++|||.+++||.++++.+.|+.+......+ ..++
T Consensus 94 k~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~-~~~a 172 (345)
T KOG2234|consen 94 KVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLS-PTGA 172 (345)
T ss_pred HHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCC-CCCc
Confidence 456788899999999999999999999999999999999999999999999999999999999999998733111 1111
Q ss_pred C-CCCCCchHHHHHHHHHHHHHHHhhHHHHHHHHccCCCChhhHHHHhhHHHHHHHHHHHHHh-CchHHHHHHhhhChH-
Q 018496 169 Y-SKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILE-GHLFLAIDFVYHHLD- 245 (355)
Q Consensus 169 ~-~~~~~~~~~G~~~~~~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-g~~~~~~~~~~~~~~- 245 (355)
+ .....+.+.|...++.+++.+|+.+++.|+++|+.+.+.+......+.++.++.+..++.. ++-.....+.+.+..
T Consensus 173 ~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~~gff~G~s~~ 252 (345)
T KOG2234|consen 173 KSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQDGEAINEYGFFYGYSSI 252 (345)
T ss_pred cCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhccccccccCCccccccHH
Confidence 1 1124577899999999999999999999999998887777777777888888877665443 221111223333332
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhhhhHhhhhHHhhhhhcccc
Q 018496 246 CFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVS 324 (355)
Q Consensus 246 ~~~~ll~~~~~~~~~~~~~~~~i~~~~~~~~si~~~~~~v~siils~~~fge~~t~~~~iG~~lv~~Gi~~~~~~k~k~ 324 (355)
.|..+ +..+++-+++...+|+.+-..-.-...+-.+++.+.|+.+||.++|....+|+.+|+..+..+...+++.
T Consensus 253 vw~vV----l~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~P~~~ 327 (345)
T KOG2234|consen 253 VWLVV----LLNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSLYPARD 327 (345)
T ss_pred HHHHH----HHHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhcCCccc
Confidence 23222 2344455667778888888888888888999999999999999999999999999999988877554443
No 23
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.80 E-value=3.5e-16 Score=144.74 Aligned_cols=248 Identities=17% Similarity=0.143 Sum_probs=172.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCCchhHHH-HHHHHHHHHHHHhHHhhhcCchhHHHHHhhhchHHHHHHHH
Q 018496 55 SLFLVFCNRLMTSAVSAGTLIASR-KAIDPVAPVYKYC-LVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGT 132 (355)
Q Consensus 55 p~~l~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~sl~~ls~~~~~i~ks~~pi~v~i~~~ 132 (355)
+....+.|.....+........++ +..+.+.+++..+ ...+.......+.+.++++++.+..+++.++.|+++.+++.
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~ 115 (292)
T COG0697 36 FLFAAALRFLIAALLLLPLLLLEPRGLRPALRPWLLLLLLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAV 115 (292)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHH
Confidence 444455577666655222222211 1122222323333 44445667778999999999999999999999999999996
Q ss_pred -HHhccccCchhhHHHHHHHHhhHHhhccCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHhhHHHHHHHHccCCCChhhH
Q 018496 133 -LIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQ 211 (355)
Q Consensus 133 -l~~~~k~s~~~~ls~~li~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~~~~~s~~~~a~~~v~~~~~~~~~~~~~~~~ 211 (355)
+++|||++++++.++++.+.|+.++...+ . .. ... ...|..+.+.+.++++++.+.+++.. + .++...
T Consensus 116 ~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~---~-~~---~~~-~~~g~~~~l~a~~~~a~~~~~~~~~~-~--~~~~~~ 184 (292)
T COG0697 116 LLLLGERLSLLQILGILLALAGVLLILLGG---G-GG---GIL-SLLGLLLALAAALLWALYTALVKRLS-R--LGPVTL 184 (292)
T ss_pred HHHccCCCcHHHHHHHHHHHHhHHheecCC---C-cc---hhH-HHHHHHHHHHHHHHHHHHHHHHHHhc-C--CChHHH
Confidence 66799999999999999999999986542 1 00 001 57899999999999999999998876 3 233344
Q ss_pred HH-HhhHHHHHHHHHHHHHhCchHHHHHHhhhChHHHHHHHHHHHHHH-HHHHHHHHHHhhhChHHHHHHHHHHHHHHHH
Q 018496 212 IF-YTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVAT-TSQFFISYTIRTFGALTFATIMTTRQLVSIV 289 (355)
Q Consensus 212 ~~-~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~ll~~~~~~~-~~~~~~~~~i~~~~~~~~si~~~~~~v~sii 289 (355)
.. +..........+......+ .......+..+.+.++.+. +++.++++++++.++...++...++++.+++
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 257 (292)
T COG0697 185 ALLLQLLLALLLLLLFFLSGFG-------APILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAAL 257 (292)
T ss_pred HHHHHHHHHHHHHHHHHhcccc-------ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH
Confidence 43 2211111111111111000 1112234555555665544 6889999999999999999999999999999
Q ss_pred HHHHHcCCCCchhhhhhhhHhhhhHHhhhhh
Q 018496 290 LSCVWFRHPLSWEQCIGSIIVFGALYTRSFF 320 (355)
Q Consensus 290 ls~~~fge~~t~~~~iG~~lv~~Gi~~~~~~ 320 (355)
++++++||+++..+++|.++++.|+.+....
T Consensus 258 ~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~ 288 (292)
T COG0697 258 LGVLLLGEPLSPAQLLGAALVVLGVLLASLR 288 (292)
T ss_pred HHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999998877665
No 24
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=99.78 E-value=3.7e-18 Score=146.39 Aligned_cols=280 Identities=13% Similarity=0.119 Sum_probs=198.8
Q ss_pred HHHhhhhcccCCCCCCCceeehHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHHhHHhhhcCch
Q 018496 34 GILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSF 113 (355)
Q Consensus 34 ~~~~e~i~~~~~~~~~~~f~~p~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~ls~ 113 (355)
..-+|.+.+. ..|+--..+.+.|.+++.+-..+..+.+-.+.| ....+++++++++.+...+.+--+++|+++
T Consensus 22 TltNKyVls~------~gfnMnflll~vQSlvcvv~l~iLk~l~~~~fR-~t~aK~WfpiSfLLv~MIyt~SKsLqyL~v 94 (309)
T COG5070 22 TLTNKYVLSN------LGFNMNFLLLAVQSLVCVVGLLILKFLRLVEFR-LTKAKKWFPISFLLVVMIYTSSKSLQYLAV 94 (309)
T ss_pred HHhhHheecC------CCCchhhHHHHHHHHHHHHHHHHHHHHhHhhee-hhhhhhhcCHHHHHHHHHHhcccceeeeee
Confidence 3445555543 236666678889988877655443333211111 234567899999999999999999999999
Q ss_pred hHHHHHhhhchHHHHHHHHHHhccccCchhhHHHHHHHHhhHHhhccCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHhh
Q 018496 114 PVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFT 193 (355)
Q Consensus 114 ~~~~i~ks~~pi~v~i~~~l~~~~k~s~~~~ls~~li~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~~~~~s~~~~a~~ 193 (355)
|.++++|.+..+.++..+.+++|.|.+-.+..+-+++++.-....++| .+..... ...-..|++|+...++..+.+
T Consensus 95 piYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D---~q~~~~~-~~~lN~GY~Wm~~Nclssaaf 170 (309)
T COG5070 95 PIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGD---QQASAFK-AQILNPGYLWMFTNCLSSAAF 170 (309)
T ss_pred eHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccch---hhHHHHH-hcccCCceEEEehhhHhHHHH
Confidence 999999999999999999999999999999999999999988877663 1111100 112235888998888888776
Q ss_pred HHHHHHHHccCCCChhhHHHHhhHHHHHHHHHHHHHhCchHHHHHHhh-hChHHHHHHHHHHHHHHHHHHHHHHHHhhhC
Q 018496 194 STFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVY-HHLDCFFDVALLSTVATTSQFFISYTIRTFG 272 (355)
Q Consensus 194 ~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~-~~~~~~~~ll~~~~~~~~~~~~~~~~i~~~~ 272 (355)
-..-++-.+-.+...++-|+|.|+.+.++++...+...|.... +... ..++...+++..+++++...++.-.|++.++
T Consensus 171 VL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~-n~annl~~d~l~am~ISgl~svgiSy~saWcvrVtS 249 (309)
T COG5070 171 VLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPG-NLANNLSVDSLMAMFISGLCSVGISYCSAWCVRVTS 249 (309)
T ss_pred HHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcc-hhhcCCChHHHHHHHHHHHHHhhhhhccceeEeehh
Confidence 6544443333334458899999999998887765544332111 1111 1234444555566666555566667899999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhhhhHhhhhHHhhhhhccccC
Q 018496 273 ALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSE 325 (355)
Q Consensus 273 ~~~~si~~~~~~v~siils~~~fge~~t~~~~iG~~lv~~Gi~~~~~~k~k~~ 325 (355)
+++.++++.+.+....+.|.++||+|.+...+..+.+-+..-.++.+.|.||+
T Consensus 250 STtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~k~ 302 (309)
T COG5070 250 STTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSKKQ 302 (309)
T ss_pred hhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999997643344455554443
No 25
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=99.77 E-value=1.9e-19 Score=158.25 Aligned_cols=226 Identities=15% Similarity=0.155 Sum_probs=172.4
Q ss_pred HHHHHHHHHHHHHHhHHhhhcCchhHHHHHhhhchHHHHHHHHHHhccccCchhhHHHHHHHHhhHHhhccCC--CCCCC
Q 018496 90 YCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPS--GADLS 167 (355)
Q Consensus 90 ~~~~~~~~~~~~~~~~~sl~~ls~~~~~i~ks~~pi~v~i~~~l~~~~k~s~~~~ls~~li~~Gv~l~~~~~~--~~~~~ 167 (355)
++++|+..+.+....++|++|+|.+.++++..++|++|.+++++++|||+++.+.++.++.+.||+++...+- +++.+
T Consensus 100 LiLRg~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~ 179 (346)
T KOG4510|consen 100 LILRGFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTE 179 (346)
T ss_pred EEeehhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCcc
Confidence 5678888888889999999999999999999999999999999999999999999999999999998753210 00111
Q ss_pred CCCCC-CCchHHHHHHHHHHHHHHHhhHHHHHHHHccCCCChhhHHHHhhHHHHHHHHHHHHHhCchHHHHHHhhhChHH
Q 018496 168 PYSKG-RENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDC 246 (355)
Q Consensus 168 ~~~~~-~~~~~~G~~~~~~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~ 246 (355)
+.+++ .+.+.+|...++.+.+.-+-..+..+++-| +.+....+.|...++++..++.+..-|+++ . .+....
T Consensus 180 g~~~s~~~~~~~gt~aai~s~lf~asvyIilR~iGk--~~h~~msvsyf~~i~lV~s~I~~~~ig~~~----l-P~cgkd 252 (346)
T KOG4510|consen 180 GEDSSQVEYDIPGTVAAISSVLFGASVYIILRYIGK--NAHAIMSVSYFSLITLVVSLIGCASIGAVQ----L-PHCGKD 252 (346)
T ss_pred ccccccccccCCchHHHHHhHhhhhhHHHHHHHhhc--cccEEEEehHHHHHHHHHHHHHHhhcccee----c-Cccccc
Confidence 11111 245677877777777777666666666645 345566677888888887776654434321 1 011123
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhhhhHhhhhHHhhhhhcc
Q 018496 247 FFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKK 322 (355)
Q Consensus 247 ~~~ll~~~~~~~~~~~~~~~~i~~~~~~~~si~~~~~~v~siils~~~fge~~t~~~~iG~~lv~~Gi~~~~~~k~ 322 (355)
|+....+++.|.++|++....+++--+...++..+..-+++.++.+++|||.+|++.|.|++++++........|.
T Consensus 253 r~l~~~lGvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~kw 328 (346)
T KOG4510|consen 253 RWLFVNLGVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALKKW 328 (346)
T ss_pred eEEEEEehhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHHHH
Confidence 4444556889999999999998888888889999999999999999999999999999999999987666655544
No 26
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.75 E-value=1.3e-15 Score=139.45 Aligned_cols=242 Identities=8% Similarity=-0.019 Sum_probs=165.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcccCCCCCCCceeehHHHHHHHHHHHHHHHHHHHHhhcCC------CC--CCCc-hhHH
Q 018496 20 IFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKA------ID--PVAP-VYKY 90 (355)
Q Consensus 20 ~~~~~g~~~~~~~~~~~~e~i~~~~~~~~~~~f~~p~~l~~~~~~~~~l~~~~~~~~~~~~------~~--~~~~-~~~~ 90 (355)
..+.....+++...++..|.+. + .+ |..+++.|++++.++..++...++++ .+ ++.+ +...
T Consensus 4 ~~~~i~a~~~wg~~~~~~k~~~-~-~~--------~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (256)
T TIGR00688 4 IIVSLLASFLFGYMYYYSKLLK-P-LP--------ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSL 73 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHHhc-c-CC--------HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHH
Confidence 4455566677777888877642 1 23 78899999999887755543322211 01 1111 1224
Q ss_pred HHHHHHHHHHHHHhHHhhhcCchhHHHHHhhhchHHHHHHHHHHhccccCchhhHHHHHHHHhhHHhhccCCCCCCCCCC
Q 018496 91 CLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYS 170 (355)
Q Consensus 91 ~~~~~~~~~~~~~~~~sl~~ls~~~~~i~ks~~pi~v~i~~~l~~~~k~s~~~~ls~~li~~Gv~l~~~~~~~~~~~~~~ 170 (355)
...+++......+.+.|++|++.+.++++.++.|+++++++++++|||+++++++++++.++|+++.... +
T Consensus 74 ~~~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~----~----- 144 (256)
T TIGR00688 74 LLCGLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVL----K----- 144 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH----c-----
Confidence 5566677788899999999999999999999999999999999999999999999999999999887532 1
Q ss_pred CCCCchHHHHHHHHHHHHHHHhhHHHHHHHHccCCCChhhHHHHhhHHHHHHHHHHHHHhCchHHHHHHhhhCh-HHHHH
Q 018496 171 KGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHL-DCFFD 249 (355)
Q Consensus 171 ~~~~~~~~G~~~~~~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~-~~~~~ 249 (355)
.+.. .++++++++++.+.+..++..++ + ..+.... .....+...+.....+... ..+.++ ..|..
T Consensus 145 --~~~~----~~~l~aa~~~a~~~i~~~~~~~~-~--~~~~~~~-~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 210 (256)
T TIGR00688 145 --GSLP----WEALVLAFSFTAYGLIRKALKNT-D--LAGFCLE-TLSLMPVAIYYLLQTDFAT----VQQTNPFPIWLL 210 (256)
T ss_pred --CCch----HHHHHHHHHHHHHHHHHhhcCCC-C--cchHHHH-HHHHHHHHHHHHHHhccCc----ccccCchhHHHH
Confidence 0111 24567889999999998886432 2 2222221 1222222222211111110 001122 25666
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHH
Q 018496 250 VALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVW 294 (355)
Q Consensus 250 ll~~~~~~~~~~~~~~~~i~~~~~~~~si~~~~~~v~siils~~~ 294 (355)
+++.++++.+++.+++.++++.+|.++++..+++|+++.++++++
T Consensus 211 l~~~g~~t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 211 LVLAGLITGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence 666777788899999999999999999999999999999999764
No 27
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=99.73 E-value=2.8e-17 Score=147.41 Aligned_cols=203 Identities=19% Similarity=0.216 Sum_probs=146.7
Q ss_pred CchhHHHHHhhhchHHHHHHHHHHhccccCchhhHHHHHHHHhhHHhhccCCCC-------------CCCCC---CCCCC
Q 018496 111 VSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGA-------------DLSPY---SKGRE 174 (355)
Q Consensus 111 ls~~~~~i~ks~~pi~v~i~~~l~~~~k~s~~~~ls~~li~~Gv~l~~~~~~~~-------------~~~~~---~~~~~ 174 (355)
+++|.++.+|+++++++|+.++...+||++..|+++..+++.|+......+... +.++. .....
T Consensus 2 isvPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g 81 (222)
T TIGR00803 2 LSVPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFG 81 (222)
T ss_pred ccccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccc
Confidence 578999999999999999999999999999999999999999988643321100 00000 00113
Q ss_pred chHHHHHHHHHHHHHHHhhHHHHHHHHccCCCChhhHHHHhhHHHHHHHHHHHHH-hCchHHHHHHhhhChHHHHHHHHH
Q 018496 175 NTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLIL-EGHLFLAIDFVYHHLDCFFDVALL 253 (355)
Q Consensus 175 ~~~~G~~~~~~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~g~~~~~~~~~~~~~~~~~~ll~~ 253 (355)
+.+.|..+.+.+++++++.++++|+.+|+++...+.......+++.+........ +++......+.+.+|...+. .
T Consensus 82 ~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 158 (222)
T TIGR00803 82 NPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTAVWI---V 158 (222)
T ss_pred cHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCchHHHH---H
Confidence 5678999999999999999999999887654443443444444444432222221 12222222222334433332 2
Q ss_pred HHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhhhhHhhhhHHh
Q 018496 254 STVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYT 316 (355)
Q Consensus 254 ~~~~~~~~~~~~~~i~~~~~~~~si~~~~~~v~siils~~~fge~~t~~~~iG~~lv~~Gi~~ 316 (355)
.+.++.+++++..++++.|+.+.+++.++|++++.++|+++|||+++..+|+|..+++.|++.
T Consensus 159 ~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l 221 (222)
T TIGR00803 159 GLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL 221 (222)
T ss_pred HHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence 355677888999999999999999999999999999999999999999999999999988764
No 28
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.69 E-value=2.7e-14 Score=133.08 Aligned_cols=269 Identities=11% Similarity=0.057 Sum_probs=178.2
Q ss_pred HHHHHHHHHHHHHHhhhhcccCCCCCCCceeehHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCchhH-HHHHHHHHHHHH
Q 018496 23 VSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYK-YCLVSMSNILTT 101 (355)
Q Consensus 23 ~~g~~~~~~~~~~~~e~i~~~~~~~~~~~f~~p~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 101 (355)
+..-..+|.+.++..|++. | ++.+++. ++.++.++...+....|++.++...... =+..|+....++
T Consensus 6 ~lia~~~wGs~g~~~k~~~----g-----~~~~~~~---~~~~g~l~~~~~~~~~~~~~~~~~~~~~~g~l~G~~w~ig~ 73 (290)
T TIGR00776 6 ALIPALFWGSFVLINVKIG----G-----GPYSQTL---GTTFGALILSIAIAIFVLPEFWALSIFLVGLLSGAFWALGQ 73 (290)
T ss_pred HHHHHHHHhhhHHHHhccC----C-----CHHHHHH---HHHHHHHHHHHHHHHHhCCcccccHHHHHHHHHHHHHHhhh
Confidence 3344566777777777664 2 4455553 4555555544333333321111111111 123344567888
Q ss_pred HHhHHhhhcCchhHHHHHhh-hchHHHHHHHHHHhccccCchh----hHHHHHHHHhhHHhhccCCCCCCCCCCCCCCch
Q 018496 102 TCQYEALKYVSFPVQTLAKC-AKMIPVMIWGTLIMQKRYKGYD----YFLALLVTLGCSIFILFPSGADLSPYSKGRENT 176 (355)
Q Consensus 102 ~~~~~sl~~ls~~~~~i~ks-~~pi~v~i~~~l~~~~k~s~~~----~ls~~li~~Gv~l~~~~~~~~~~~~~~~~~~~~ 176 (355)
.+.+.|.++++.++...+-+ ..++.+.+.+.+++|||.++++ +++++++++|+++....++ ++.+ .++..+.
T Consensus 74 ~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~-~~~~--~~~~~~~ 150 (290)
T TIGR00776 74 INQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKD-KSAG--IKSEFNF 150 (290)
T ss_pred hhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccc-cccc--cccccch
Confidence 99999999999988866666 7788888999999999999999 9999999999988765421 1110 0000223
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHccCCCChhhHHHHhhH----HHHHHHHHHHHHhCchHHHHHHhhhChHHHHHHHH
Q 018496 177 VWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTL----CSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVAL 252 (355)
Q Consensus 177 ~~G~~~~~~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~ll~ 252 (355)
..|+.+.+++.++++.+.+.-|+. +.+|.+..+.... .+.++..+. ....+ ..++.++..+.
T Consensus 151 ~~Gi~~~l~sg~~y~~~~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~---------~~~~~~~~~~~ 216 (290)
T TIGR00776 151 KKGILLLLMSTIGYLVYVVVAKAF----GVDGLSVLLPQAIGMVIGGIIFNLGH-ILAKP---------LKKYAILLNIL 216 (290)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHc----CCCcceehhHHHHHHHHHHHHHHHHH-hcccc---------hHHHHHHHHHH
Confidence 679999999999999999888754 2456655433322 222222111 00011 11222222333
Q ss_pred HHHHHHHHHHHHHHHHh-hhChHHHHHHHHHHHHHHHHHHHHHcCCCCchhhh----hhhhHhhhhHHhhhhh
Q 018496 253 LSTVATTSQFFISYTIR-TFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQC----IGSIIVFGALYTRSFF 320 (355)
Q Consensus 253 ~~~~~~~~~~~~~~~i~-~~~~~~~si~~~~~~v~siils~~~fge~~t~~~~----iG~~lv~~Gi~~~~~~ 320 (355)
.++...+++.+++...+ +.++.+.++..+.+|+.+++++++++||+.+..|+ +|.+++++|+.+....
T Consensus 217 ~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~~ 289 (290)
T TIGR00776 217 PGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGIG 289 (290)
T ss_pred HHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhcc
Confidence 56666667777777888 99999999999999999999999999999999999 9999999988776544
No 29
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.67 E-value=3.3e-16 Score=144.20 Aligned_cols=231 Identities=13% Similarity=0.060 Sum_probs=176.9
Q ss_pred HHHHHHHHHHHHHhHHhhhcCchhHHHHHhhhchHHHHHHHHHHhccccCchhhHHHHHHHHhhHHhhccCCCCCCCCCC
Q 018496 91 CLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYS 170 (355)
Q Consensus 91 ~~~~~~~~~~~~~~~~sl~~ls~~~~~i~ks~~pi~v~i~~~l~~~~k~s~~~~ls~~li~~Gv~l~~~~~~~~~~~~~~ 170 (355)
+..+.+.+.++.+.|.||.|.+++..+++.+++-+|++.++.++..||+++.|.+++.+.++|++++..++. +++ ++
T Consensus 163 l~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s--~~~-~~ 239 (416)
T KOG2765|consen 163 LFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDS--KQN-SD 239 (416)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccc--ccc-cc
Confidence 345566789999999999999999999999999999999999999999999999999999999999887742 111 11
Q ss_pred CCCCchHHHHHHHHHHHHHHHhhHHHHHHHHccC--CCChhhHHHHhhHHHHHHHHHHHHHhCchHHHHHHhhhChHHHH
Q 018496 171 KGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGY--DMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFF 248 (355)
Q Consensus 171 ~~~~~~~~G~~~~~~s~~~~a~~~v~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~ 248 (355)
...+....|.++++++++.+|.|.++.+|-..++ +.+.....-|..++..+++.|.+++-.-..+ -.|...+.....
T Consensus 240 ~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~-e~F~lP~~~q~~ 318 (416)
T KOG2765|consen 240 LPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGE-ERFELPSSTQFS 318 (416)
T ss_pred CCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhcc-CcccCCCCceeE
Confidence 1235668999999999999999999998877665 3555555566777887777765432111100 011111211222
Q ss_pred HHHHHHH-HHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhhhhHhhhhHHhhhhhccccC
Q 018496 249 DVALLST-VATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSE 325 (355)
Q Consensus 249 ~ll~~~~-~~~~~~~~~~~~i~~~~~~~~si~~~~~~v~siils~~~fge~~t~~~~iG~~lv~~Gi~~~~~~k~k~~ 325 (355)
.++..++ ..++.-+++..+.-.++|+++++..++....+++.+.++-|+++++.+++|...|++|.+..++..+...
T Consensus 319 ~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~~~~ 396 (416)
T KOG2765|consen 319 LVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSENSK 396 (416)
T ss_pred eeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheeccccccc
Confidence 2223333 3455568888899999999999999999999999999999999999999999999999988888755443
No 30
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=99.65 E-value=5.2e-15 Score=124.63 Aligned_cols=141 Identities=18% Similarity=0.255 Sum_probs=116.6
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHcc-----CCCChhhHHHHhhHHHHHHHHHHHHHhCchH--HHH-HHhh----hChHH
Q 018496 179 GVSLMVGYLGFDGFTSTFQDKLFKG-----YDMEIHNQIFYTTLCSCVLSLSGLILEGHLF--LAI-DFVY----HHLDC 246 (355)
Q Consensus 179 G~~~~~~s~~~~a~~~v~~~~~~~~-----~~~~~~~~~~~~~~~~~i~~~~~~~~~g~~~--~~~-~~~~----~~~~~ 246 (355)
|+++++.|.++.+++++++|+.+++ .+.++.++++|+++.+.+..+|..+..++.. +.. .... ..+..
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 6788999999999999999999888 5789999999999999999888766544322 111 1111 13345
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhhhhHhhhhHHhhhh
Q 018496 247 FFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSF 319 (355)
Q Consensus 247 ~~~ll~~~~~~~~~~~~~~~~i~~~~~~~~si~~~~~~v~siils~~~fge~~t~~~~iG~~lv~~Gi~~~~~ 319 (355)
+..++..++.+...+++.+.+++++||+++++.+.+|++..+++|+++|||++|+.+++|+++.+.|.+.|.|
T Consensus 81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy 153 (153)
T PF03151_consen 81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY 153 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence 5555666777888889999999999999999999999999999999999999999999999999999877654
No 31
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=99.61 E-value=1.1e-13 Score=122.84 Aligned_cols=226 Identities=17% Similarity=0.138 Sum_probs=170.0
Q ss_pred HHHHHHHHHHHHHHhHHhhhcCchhHHHHHhhhchHHHHHHHHHHhccccCchhhHHHHHHHHhhHHhhccCCCCCCCCC
Q 018496 90 YCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPY 169 (355)
Q Consensus 90 ~~~~~~~~~~~~~~~~~sl~~ls~~~~~i~ks~~pi~v~i~~~l~~~~k~s~~~~ls~~li~~Gv~l~~~~~~~~~~~~~ 169 (355)
+++.++|-..++.+.|.+|.+.+.+.++++|-...+||-+++.-+++++.+.+||++++.+.+|++++...+-..+.++.
T Consensus 89 fl~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p~ 168 (372)
T KOG3912|consen 89 FLPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDPY 168 (372)
T ss_pred ecChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCCc
Confidence 46788999889999999999999999999999999999999999999999999999999999999887654221111111
Q ss_pred CCCCCchHHHHHHHHHHHHHHHhhHHHHHHHHccCCCChhhHHHHhhHHHHHHHH----HHHH-HhCc---------hH-
Q 018496 170 SKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSL----SGLI-LEGH---------LF- 234 (355)
Q Consensus 170 ~~~~~~~~~G~~~~~~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~----~~~~-~~g~---------~~- 234 (355)
.+-+.-+.|.++++++.+.-|+..+..||.+++++++|.+...|-..++..+.. |... ..++ +.
T Consensus 169 -~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD 247 (372)
T KOG3912|consen 169 -TDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLED 247 (372)
T ss_pred -cccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhh
Confidence 112456789999999999999999999999999999999999999888854432 2111 1121 11
Q ss_pred --HHHHHhhhChHHHHHHHHHHHHHH--HHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhhhhHh
Q 018496 235 --LAIDFVYHHLDCFFDVALLSTVAT--TSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIV 310 (355)
Q Consensus 235 --~~~~~~~~~~~~~~~ll~~~~~~~--~~~~~~~~~i~~~~~~~~si~~~~~~v~siils~~~fge~~t~~~~iG~~lv 310 (355)
+.+.-....|... +.+.+.... +-++.-.+..|..|+++-.+.-.+|..+..++++....|.+...|+.|..+.
T Consensus 248 ~~~~~~~~~e~p~l~--val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliL 325 (372)
T KOG3912|consen 248 WGDAFAALQESPSLA--VALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLIL 325 (372)
T ss_pred HHHHHHHhcCCchhH--HHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHH
Confidence 1111222233322 222222111 1122333468999999999999999999999999999999999999999998
Q ss_pred hhhHHhhh
Q 018496 311 FGALYTRS 318 (355)
Q Consensus 311 ~~Gi~~~~ 318 (355)
+.|+..|+
T Consensus 326 i~Gi~lY~ 333 (372)
T KOG3912|consen 326 IMGIILYN 333 (372)
T ss_pred HHHHHHHH
Confidence 88876654
No 32
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=99.53 E-value=3e-11 Score=108.80 Aligned_cols=272 Identities=12% Similarity=0.055 Sum_probs=175.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCceeehHHHHHHHHHHHHHHHHHHHHhhcCCCC---CCCchhHHH--
Q 018496 17 LKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAID---PVAPVYKYC-- 91 (355)
Q Consensus 17 ~~~~~~~~g~~~~~~~~~~~~e~i~~~~~~~~~~~f~~p~~l~~~~~~~~~l~~~~~~~~~~~~~~---~~~~~~~~~-- 91 (355)
.|..+.....|+.+...-++-|.+-.. + +.-+..-|.+-+.....+.+...|+.+. -.++.|+++
T Consensus 6 ~~Gil~~l~Ay~lwG~lp~y~kll~~~--~--------~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~ 75 (293)
T COG2962 6 RKGILLALLAYLLWGLLPLYFKLLEPL--P--------ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLML 75 (293)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHccC--C--------HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHH
Confidence 455555556666666555566666422 1 3344555555555554444333332110 011122222
Q ss_pred -HHHHHHHHHHHHhHHhhhcCchhHHHHHhhhchHHHHHHHHHHhccccCchhhHHHHHHHHhhHHhhccCCCCCCCCCC
Q 018496 92 -LVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYS 170 (355)
Q Consensus 92 -~~~~~~~~~~~~~~~sl~~ls~~~~~i~ks~~pi~v~i~~~l~~~~k~s~~~~ls~~li~~Gv~l~~~~~~~~~~~~~~ 170 (355)
..++.-..+-....+|.++-..-...+....+|++.++++.+++|||.++.|++++.+..+||..-....
T Consensus 76 ~l~a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~--------- 146 (293)
T COG2962 76 ALTALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLL--------- 146 (293)
T ss_pred HHHHHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc---------
Confidence 2233333333455566665333345556677999999999999999999999999999999999877542
Q ss_pred CCCCchHHHHHHHHHHHHHHHhhHHHHHHHHccCCCChhhHHHHhhHHHHHHHHHHHHHhCchHHHHHHhh-hChHHHHH
Q 018496 171 KGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVY-HHLDCFFD 249 (355)
Q Consensus 171 ~~~~~~~~G~~~~~~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~-~~~~~~~~ 249 (355)
.+..+..+.++ +.+++|....|++ +.++.+-+..-.++-.+..+...+..++-. ++.. +++..+..
T Consensus 147 --g~lpwval~la----~sf~~Ygl~RK~~----~v~a~~g~~lE~l~l~p~al~yl~~l~~~~---~~~~~~~~~~~~L 213 (293)
T COG2962 147 --GSLPWVALALA----LSFGLYGLLRKKL----KVDALTGLTLETLLLLPVALIYLLFLADSG---QFLQQNANSLWLL 213 (293)
T ss_pred --CCCcHHHHHHH----HHHHHHHHHHHhc----CCchHHhHHHHHHHHhHHHHHHHHHHhcCc---hhhhcCCchHHHH
Confidence 24556665555 3677888665443 456666555554444444444433322211 1222 34555656
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhhhhHhhhhHHhhhhh
Q 018496 250 VALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFF 320 (355)
Q Consensus 250 ll~~~~~~~~~~~~~~~~i~~~~~~~~si~~~~~~v~siils~~~fge~~t~~~~iG~~lv~~Gi~~~~~~ 320 (355)
+...|..+++.-.+...+-++.+=.+.+...+.+|..-.+++++++||+++..+++..+.+-.|+.++.+.
T Consensus 214 Lv~aG~vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d 284 (293)
T COG2962 214 LVLAGLVTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSID 284 (293)
T ss_pred HHHhhHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 66667777777667777899999999999999999999999999999999999999999999988777664
No 33
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=99.51 E-value=1.4e-11 Score=108.29 Aligned_cols=245 Identities=10% Similarity=0.053 Sum_probs=171.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHHhHHhhhcCchhHHHHHhhhchHHHHHHHHHH
Q 018496 55 SLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLI 134 (355)
Q Consensus 55 p~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~ls~~~~~i~ks~~pi~v~i~~~l~ 134 (355)
|+-.+..|..++.++....++-+++ +..+.+++..+.-|++....|.+.|.|++.+|.++.+-+..+.|+.+.+++
T Consensus 40 ~~g~t~lRl~~aaLIll~l~RPwr~-r~~~~~~~~~~~yGvsLg~MNl~FY~si~riPlGiAVAiEF~GPL~vA~~~--- 115 (292)
T COG5006 40 AAGVTALRLAIAALILLALFRPWRR-RLSKPQRLALLAYGVSLGGMNLLFYLSIERIPLGIAVAIEFTGPLAVALLS--- 115 (292)
T ss_pred hhhHHHHHHHHHHHHHHHHhhHHHh-ccChhhhHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccHHHHHHHh---
Confidence 6667888888777766554332222 122345666778898888999999999999999999999999998877643
Q ss_pred hccccCchhhHHHHHHHHhhHHhhccCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHhhHHHHHHHHccCCCChhhHHHH
Q 018496 135 MQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFY 214 (355)
Q Consensus 135 ~~~k~s~~~~ls~~li~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~~~~~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~ 214 (355)
.|| .++...+.+.+.|..+..-.+. + ..+.+..|..+++.+..||+.|.+..+|.-+. + +.-.-+.+
T Consensus 116 -sRr--~~d~vwvaLAvlGi~lL~p~~~--~------~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~-~-~g~~g~a~ 182 (292)
T COG5006 116 -SRR--LRDFVWVALAVLGIWLLLPLGQ--S------VWSLDPVGVALALGAGACWALYIVLGQRAGRA-E-HGTAGVAV 182 (292)
T ss_pred -ccc--hhhHHHHHHHHHHHHhheeccC--C------cCcCCHHHHHHHHHHhHHHHHHHHHcchhccc-C-CCchHHHH
Confidence 333 4455666778888877653310 1 13578899999999999999999998887532 1 22233344
Q ss_pred hhHHHHHHHHHHHHHhCchHHHHHHhhhChHHHHHHHHHHHHH-HHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHH
Q 018496 215 TTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVA-TTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCV 293 (355)
Q Consensus 215 ~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~ll~~~~~~-~~~~~~~~~~i~~~~~~~~si~~~~~~v~siils~~ 293 (355)
-..++.++.+|+-..+.. -.+ .+|+....-+..++++ ++-+.+-..++++.++-+.++...++|.+..+.+++
T Consensus 183 gm~vAaviv~Pig~~~ag----~~l--~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i 256 (292)
T COG5006 183 GMLVAALIVLPIGAAQAG----PAL--FSPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLI 256 (292)
T ss_pred HHHHHHHHHhhhhhhhcc----hhh--cChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHH
Confidence 445555666665332211 011 3455544444444433 344445666899999999999999999999999999
Q ss_pred HcCCCCchhhhhhhhHhhhhHHhhhhhcc
Q 018496 294 WFRHPLSWEQCIGSIIVFGALYTRSFFKK 322 (355)
Q Consensus 294 ~fge~~t~~~~iG~~lv~~Gi~~~~~~k~ 322 (355)
++||.+|+.||+|++.|+.+..-..+.-+
T Consensus 257 ~L~e~ls~~qwlaI~~ViaAsaG~~lt~~ 285 (292)
T COG5006 257 FLGETLTLIQWLAIAAVIAASAGSTLTAR 285 (292)
T ss_pred HhcCCCCHHHHHHHHHHHHHHhccccccC
Confidence 99999999999999999977554444433
No 34
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=99.45 E-value=1.3e-14 Score=127.16 Aligned_cols=249 Identities=16% Similarity=0.185 Sum_probs=176.9
Q ss_pred eeehHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHHhHHhhhcCchhHHHHHhhhchHHHHHHH
Q 018496 52 FKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWG 131 (355)
Q Consensus 52 f~~p~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~ls~~~~~i~ks~~pi~v~i~~ 131 (355)
.+.|..-+|.....-+++=..+...|+ +.-+..|+.|++.++..+-++.+-..|.+|.+.....++.+-....+++++
T Consensus 45 iN~Pt~QtFl~Y~LLalVY~~~~~fR~--~~~~~~~~hYilla~~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~ls 122 (336)
T KOG2766|consen 45 INAPTSQTFLNYVLLALVYGPIMLFRR--KYIKAKWRHYILLAFVDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLS 122 (336)
T ss_pred CCCccHHHHHHHHHHHHHHhhHHHhhh--HHHHHHHHHhhheeEEeecccEEEeeehhhcchHHHHHHHHhhhHHHHHHH
Confidence 445665555554333332223334443 223457888999998888888888899999998777777776677778899
Q ss_pred HHHhccccCchhhHHHHHHHHhhHHhhccCCCCCCCCC-CCCCCchHHHHHHHHHHHHHHHhhHHHHHHHHccCCCChhh
Q 018496 132 TLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPY-SKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHN 210 (355)
Q Consensus 132 ~l~~~~k~s~~~~ls~~li~~Gv~l~~~~~~~~~~~~~-~~~~~~~~~G~~~~~~s~~~~a~~~v~~~~~~~~~~~~~~~ 210 (355)
|+++|.|+.+.|+.++.+|..|+.+..+.+ .... ..+.++...|..++++++-++|+.++.+|.+.|+ .+..+
T Consensus 123 w~fLktrYrlmki~gV~iCi~GvvmvV~sD----V~agd~aggsnp~~GD~lvi~GATlYaVSNv~EEflvkn--~d~~e 196 (336)
T KOG2766|consen 123 WFFLKTRYRLMKISGVVICIVGVVMVVFSD----VHAGDRAGGSNPVKGDFLVIAGATLYAVSNVSEEFLVKN--ADRVE 196 (336)
T ss_pred HHHHHHHHhhheeeeEEeEecceEEEEEee----eccccccCCCCCccCcEEEEecceeeeeccccHHHHHhc--CcHHH
Confidence 999999999999999999999999887663 2211 1123567889999999999999999999998884 57899
Q ss_pred HHHHhhHHHHHHHHHHHHHhCchHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHH----HHhhhChHHHHHHHHHHHHH
Q 018496 211 QIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISY----TIRTFGALTFATIMTTRQLV 286 (355)
Q Consensus 211 ~~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~----~i~~~~~~~~si~~~~~~v~ 286 (355)
+|....++++++..+-.+.+-.-. ...+.+ |....++. .++..++.|. .+|..|++..++-..+....
T Consensus 197 lm~~lgLfGaIIsaIQ~i~~~~~~---~tl~w~---~~i~~yl~--f~L~MFllYsl~pil~k~~~aT~~nlslLTsDmw 268 (336)
T KOG2766|consen 197 LMGFLGLFGAIISAIQFIFERHHV---STLHWD---SAIFLYLR--FALTMFLLYSLAPILIKTNSATMFNLSLLTSDMW 268 (336)
T ss_pred HHHHHHHHHHHHHHHHHhhhccce---eeEeeh---HHHHHHHH--HHHHHHHHHHhhHHheecCCceEEEhhHhHHHHH
Confidence 999999999998876543322100 011111 11111222 2222222222 47888888888888888888
Q ss_pred HHHHHHHHcCCCCchhhhhhhhHhhhhHHhhh
Q 018496 287 SIVLSCVWFRHPLSWEQCIGSIIVFGALYTRS 318 (355)
Q Consensus 287 siils~~~fge~~t~~~~iG~~lv~~Gi~~~~ 318 (355)
++++ ..||-+++|...+..+.+..|+.++.
T Consensus 269 sl~i--~~FgYhv~wLY~laF~~i~~GliiYs 298 (336)
T KOG2766|consen 269 SLLI--RTFGYHVDWLYFLAFATIATGLIIYS 298 (336)
T ss_pred HHHH--HHHhcchhhhhHHHHHHHHHhhEEee
Confidence 8888 77998999999999999999987763
No 35
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.01 E-value=3.5e-09 Score=85.26 Aligned_cols=124 Identities=18% Similarity=0.227 Sum_probs=95.1
Q ss_pred HHHHhhHHHHHHHHccCCCChhhHHHHhhHHHHHHHHHHHHHhCchHHHHHHhhhChHHHHHHHHHHHH-HHHHHHHHHH
Q 018496 188 GFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTV-ATTSQFFISY 266 (355)
Q Consensus 188 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~ll~~~~~-~~~~~~~~~~ 266 (355)
+++|.+.+..|+..++ .++....++....+.+ .++.....+... ....++..+...+..+.. ..+++.+.+.
T Consensus 1 ~~~a~~~~~~k~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLKK--ISPLSITFWRFLIAGI-LLILLLILGRKP----FKNLSPRQWLWLLFLGLLGTALAYLLYFY 73 (126)
T ss_pred ceeeeHHHHHHHHhcc--CCHHHHHHHHHHHHHH-HHHHHHhhcccc----ccCCChhhhhhhhHhhccceehHHHHHHH
Confidence 3678888899988875 5788888888888876 444433322211 112233445455555554 5778888999
Q ss_pred HHhhhChHHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhhhhHhhhhHHhhh
Q 018496 267 TIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRS 318 (355)
Q Consensus 267 ~i~~~~~~~~si~~~~~~v~siils~~~fge~~t~~~~iG~~lv~~Gi~~~~ 318 (355)
++++.++...+++..++|+++.++++++++|++++.+++|+.+++.|+++..
T Consensus 74 a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 74 ALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred HHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999987643
No 36
>COG2510 Predicted membrane protein [Function unknown]
Probab=98.96 E-value=2.8e-09 Score=84.36 Aligned_cols=133 Identities=14% Similarity=0.144 Sum_probs=104.3
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHccCCCChhhHHHHhhHHHHHHHHHHHHHhCchHHHHHHhhhChHHHHHHHHHHHHHHH
Q 018496 180 VSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATT 259 (355)
Q Consensus 180 ~~~~~~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~ll~~~~~~~~ 259 (355)
..++++++++.++..++.|.-+++ .||.--.+.-+....+++..++...|+.+..-. -++..|..+.+.++.+.+
T Consensus 5 ~~~ALLsA~fa~L~~iF~KIGl~~--vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~---~~~k~~lflilSGla~gl 79 (140)
T COG2510 5 IIYALLSALFAGLTPIFAKIGLEG--VDPDFATTIRTIVILIFLLIVLLVTGNWQAGGE---IGPKSWLFLILSGLAGGL 79 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccc--cCccHHHHHHHHHHHHHHHHHHHhcCceecccc---cCcceehhhhHHHHHHHH
Confidence 467788999999999988776663 455555555566666666666667776432111 255667677777888888
Q ss_pred HHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhhhhHhhhhHHhh
Q 018496 260 SQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTR 317 (355)
Q Consensus 260 ~~~~~~~~i~~~~~~~~si~~~~~~v~siils~~~fge~~t~~~~iG~~lv~~Gi~~~ 317 (355)
+-+++|++++...+..+..+.-+.+++++++|++++||+++..+|+|+.++..|..+.
T Consensus 80 swl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailv 137 (140)
T COG2510 80 SWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILV 137 (140)
T ss_pred HHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeE
Confidence 8899999999999999999999999999999999999999999999999999886543
No 37
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=98.91 E-value=8.2e-09 Score=83.03 Aligned_cols=120 Identities=16% Similarity=0.212 Sum_probs=90.7
Q ss_pred HHHHHHHHhhhhcccCCCCCCCceeehHHHHHHHHHHHHHHHHHHHHhhcCC---CCCCCchhHHHHHHHH-HHHHHHHh
Q 018496 29 TLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKA---IDPVAPVYKYCLVSMS-NILTTTCQ 104 (355)
Q Consensus 29 ~~~~~~~~~e~i~~~~~~~~~~~f~~p~~l~~~~~~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~-~~~~~~~~ 104 (355)
++..+.+++|+..++ .+ |...++.|+..+.+ ........+++ ..+...+...+..+++ ...+..+.
T Consensus 2 ~~a~~~~~~k~~~~~-~~--------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (126)
T PF00892_consen 2 SWAIYSVFSKKLLKK-IS--------PLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLY 71 (126)
T ss_pred eeeeHHHHHHHHhcc-CC--------HHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHH
Confidence 456677888888754 22 67788899988886 43333322221 1112233344556665 57888999
Q ss_pred HHhhhcCchhHHHHHhhhchHHHHHHHHHHhccccCchhhHHHHHHHHhhHHhh
Q 018496 105 YEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFI 158 (355)
Q Consensus 105 ~~sl~~ls~~~~~i~ks~~pi~v~i~~~l~~~~k~s~~~~ls~~li~~Gv~l~~ 158 (355)
+.++++++.+...++..+.|+++++++++++||+++++++++++++++|+.+..
T Consensus 72 ~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 72 FYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred HHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999998764
No 38
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=98.86 E-value=6.3e-09 Score=88.43 Aligned_cols=218 Identities=11% Similarity=0.096 Sum_probs=153.1
Q ss_pred HHHHHHHHHHHHHHHhHHhhhcCchhHHHHHhhhchHHHHHHHHHHhccccCchhhHHHHHHHHhhHHhhccCCCCCCCC
Q 018496 89 KYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSP 168 (355)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~sl~~ls~~~~~i~ks~~pi~v~i~~~l~~~~k~s~~~~ls~~li~~Gv~l~~~~~~~~~~~~ 168 (355)
+..|.+++.+++++....+++.++.+..+-+.+|.--+|.++++++++.|+.-.+++++++.+.|++++++.+ .
T Consensus 55 ~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~D----N-- 128 (290)
T KOG4314|consen 55 RTAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYAD----N-- 128 (290)
T ss_pred eecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEecc----c--
Confidence 3456677888999999999999999988888999999999999999999999999999999999999988663 1
Q ss_pred CCCCCCchHHHHHHHHHHHHHHHhhHHHHHHHHccCCCChhhHHHHhh---HHHHHH-HHHH--HHHhCchHHHHHHhhh
Q 018496 169 YSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTT---LCSCVL-SLSG--LILEGHLFLAIDFVYH 242 (355)
Q Consensus 169 ~~~~~~~~~~G~~~~~~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~---~~~~i~-~~~~--~~~~g~~~~~~~~~~~ 242 (355)
+....+.|+.++++|+++.++|-+..|+.....+.. +...+++ ++..++ ..|. +.++|. |.++....
T Consensus 129 ---~~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~G--daa~FmS~LGF~NL~~~~~~~lIL~~T~V--E~~qsFA~ 201 (290)
T KOG4314|consen 129 ---EHADEIIGIACAVGSAFMAALYKVLFKMFIGNANFG--DAAHFMSCLGFFNLCFISFPALILAFTGV--EHLQSFAA 201 (290)
T ss_pred ---hhhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcch--hHHHHHHHHHHHHHHHHhhhHHHHHHhch--HHHHHHhh
Confidence 125789999999999999999999998887543321 1111222 122111 1222 222331 11111111
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhhhhHhhhhHHhhhhhc
Q 018496 243 HLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFK 321 (355)
Q Consensus 243 ~~~~~~~ll~~~~~~~~~~~~~~~~i~~~~~~~~si~~~~~~v~siils~~~fge~~t~~~~iG~~lv~~Gi~~~~~~k 321 (355)
.| |..+...+....--++.+...+....|...|+-+..........++++-+-+.+.....|..++..|..+...+.
T Consensus 202 ~P--WG~l~G~A~L~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLiiiP~ 278 (290)
T KOG4314|consen 202 AP--WGCLCGAAGLSLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILIIIPE 278 (290)
T ss_pred CC--chhhhhHHHHHHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHheeccc
Confidence 12 322221121111122344457888999999998888888889999887777899999999999999977655543
No 39
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.82 E-value=4.5e-08 Score=78.12 Aligned_cols=99 Identities=13% Similarity=0.112 Sum_probs=74.0
Q ss_pred HHHHHHHHHHHHHHHhhcCCC-----CCCCchhHHHHHHHHHH-HHHHHhHHhhhcCchhHHHHHhhhchHHHHHHHHHH
Q 018496 61 CNRLMTSAVSAGTLIASRKAI-----DPVAPVYKYCLVSMSNI-LTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLI 134 (355)
Q Consensus 61 ~~~~~~~l~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~-~~~~~~~~sl~~ls~~~~~i~ks~~pi~v~i~~~l~ 134 (355)
.|++.+.++...+...+++.. .++.++...+..+++.. .+..+.+.|+++.+ +....+.++.|+++++++.++
T Consensus 3 ~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~ 81 (113)
T PF13536_consen 3 FRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLF 81 (113)
T ss_pred HHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHH
Confidence 355555555544444333210 11234444555576654 78899999999999 577788899999999999999
Q ss_pred hccccCchhhHHHHHHHHhhHHhhcc
Q 018496 135 MQKRYKGYDYFLALLVTLGCSIFILF 160 (355)
Q Consensus 135 ~~~k~s~~~~ls~~li~~Gv~l~~~~ 160 (355)
+|||++++++++++++++|+++....
T Consensus 82 ~~er~~~~~~~a~~l~~~Gv~li~~~ 107 (113)
T PF13536_consen 82 FKERLSPRRWLAILLILIGVILIAWS 107 (113)
T ss_pred hcCCCCHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999999998876
No 40
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=98.76 E-value=2.5e-06 Score=77.57 Aligned_cols=209 Identities=11% Similarity=0.080 Sum_probs=139.5
Q ss_pred HHHHHHHHHHHHHHhHHhhhcCchhHHHHH-hhhchHHHHHHHHHHhccccCchhhH----HHHHHHHhhHHhhccCCCC
Q 018496 90 YCLVSMSNILTTTCQYEALKYVSFPVQTLA-KCAKMIPVMIWGTLIMQKRYKGYDYF----LALLVTLGCSIFILFPSGA 164 (355)
Q Consensus 90 ~~~~~~~~~~~~~~~~~sl~~ls~~~~~i~-ks~~pi~v~i~~~l~~~~k~s~~~~l----s~~li~~Gv~l~~~~~~~~ 164 (355)
-+..|++...+...++.|++++.++...=+ .....+-+.+++.++++|-.+..+++ +++++++|+.+.+..+..+
T Consensus 48 ~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~~~ 127 (269)
T PF06800_consen 48 AFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQDKKS 127 (269)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhccccccc
Confidence 356778889999999999998654321111 11234566788999999988877755 8889999999988764221
Q ss_pred CCCCCCCCCCchHHHHHHHHHHHHHHHhhHHHHHHHHccCCCChhhHHHHhhHHHHHHHH-HHHHHhCchHHHHHHhhhC
Q 018496 165 DLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSL-SGLILEGHLFLAIDFVYHH 243 (355)
Q Consensus 165 ~~~~~~~~~~~~~~G~~~~~~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~g~~~~~~~~~~~~ 243 (355)
+ ..++..+...|+..++.+.+.+..|.+..+. .+.+++...+=.. .+.++.. .+.....+ .+ .+
T Consensus 128 ~---~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~----~~~~~~~~~lPqa-iGm~i~a~i~~~~~~~-----~~--~~ 192 (269)
T PF06800_consen 128 D---KSSSKSNMKKGILALLISTIGYWIYSVIPKA----FHVSGWSAFLPQA-IGMLIGAFIFNLFSKK-----PF--FE 192 (269)
T ss_pred c---ccccccchhhHHHHHHHHHHHHHHHHHHHHh----cCCChhHhHHHHH-HHHHHHHHHHhhcccc-----cc--cc
Confidence 1 1111345677999999999999999887544 2466766655332 3333322 22222211 01 11
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHcCCCCchhh----hhhhhHhhhhH
Q 018496 244 LDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQ----CIGSIIVFGAL 314 (355)
Q Consensus 244 ~~~~~~ll~~~~~~~~~~~~~~~~i~~~~~~~~si~~~~~~v~siils~~~fge~~t~~~----~iG~~lv~~Gi 314 (355)
...|.. ++-++.=.+++++.+...++.|..+.=..+.+..+++.+.+++++||.=+..+ ++|..+++.|.
T Consensus 193 k~~~~n-il~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~ 266 (269)
T PF06800_consen 193 KKSWKN-ILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGA 266 (269)
T ss_pred cchHHh-hHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhh
Confidence 122332 23345556788888889999999999999999999999999999999877664 46777776554
No 41
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=98.73 E-value=8.9e-07 Score=82.84 Aligned_cols=140 Identities=11% Similarity=0.119 Sum_probs=103.7
Q ss_pred CchHHHHHHHHHHHHHHHhhHHHHHHHHccCCCChhhHHHHhhHHHHHHHHHHHHHhCchHHHHHHhhhChHHHHHHHHH
Q 018496 174 ENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALL 253 (355)
Q Consensus 174 ~~~~~G~~~~~~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~ll~~ 253 (355)
+....|.++++++.+++|...+..|.. . +.+|.++.++-..++.+...+.....++....... ..++..+...+.-
T Consensus 4 ~~~~~g~~~~l~a~~~wg~~~~~~k~~-~--~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 79 (296)
T PRK15430 4 KQTRQGVLLALAAYFIWGIAPAYFKLI-Y--YVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTL-IQTPQKIFMLAVS 79 (296)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHh-c--CCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHH-HcCHHHHHHHHHH
Confidence 355679999999999999999988653 3 47899999999999887666655444432211110 1122222222222
Q ss_pred HHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhhhhHhhhhHHhh
Q 018496 254 STVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTR 317 (355)
Q Consensus 254 ~~~~~~~~~~~~~~i~~~~~~~~si~~~~~~v~siils~~~fge~~t~~~~iG~~lv~~Gi~~~ 317 (355)
++.....+.+.++++++.++...+++..+.|+++.++++++++|+++..+|+|+++.+.|+.+.
T Consensus 80 ~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li 143 (296)
T PRK15430 80 AVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQ 143 (296)
T ss_pred HHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHH
Confidence 2334455678889999999999999999999999999999999999999999999999887654
No 42
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=98.69 E-value=1.1e-06 Score=80.49 Aligned_cols=136 Identities=13% Similarity=0.111 Sum_probs=101.4
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHccCCCChhhHHHHhhHHHHHHHHHHHHHhCchHHHHHHhh-hCh-HHHHHHHHHHHH
Q 018496 179 GVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVY-HHL-DCFFDVALLSTV 256 (355)
Q Consensus 179 G~~~~~~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~-~~~-~~~~~ll~~~~~ 256 (355)
|..+++++.+++|...+..|. .. +.+|.++.++-..++.+...+.....++..+.....+ .+. +.+..+...++.
T Consensus 3 g~~~~i~a~~~wg~~~~~~k~-~~--~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 79 (256)
T TIGR00688 3 GIIVSLLASFLFGYMYYYSKL-LK--PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL 79 (256)
T ss_pred cHHHHHHHHHHHHHHHHHHHH-hc--cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence 788899999999999999876 33 4789999999999988776665444332111001111 111 112223334545
Q ss_pred HHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhhhhHhhhhHHhh
Q 018496 257 ATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTR 317 (355)
Q Consensus 257 ~~~~~~~~~~~i~~~~~~~~si~~~~~~v~siils~~~fge~~t~~~~iG~~lv~~Gi~~~ 317 (355)
....+.+.+.++++.++.+.+++..+.|+++.+++.++++|+++..+|+|..+.+.|+.+.
T Consensus 80 ~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li 140 (256)
T TIGR00688 80 IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISN 140 (256)
T ss_pred HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 5566678889999999999999999999999999999999999999999999999886643
No 43
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=98.51 E-value=2.3e-06 Score=79.44 Aligned_cols=133 Identities=9% Similarity=-0.006 Sum_probs=92.8
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHccCCCChhhHHHHhhHHHHHHHHHHHHHhCchHHHHHHhhhChHHHHHHHHHHHHHHH
Q 018496 180 VSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATT 259 (355)
Q Consensus 180 ~~~~~~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~ll~~~~~~~~ 259 (355)
+.+.+.++++++...+..|+..++. ++ ..++......+...|+....... ..+...+.+.+..++..++....
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~~--~~--~~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 75 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADKE--PD--FLWWALLAHSVLLTPYGLWYLAQ---VGWSRLPATFWLLLAISAVANMV 75 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCch--hH--HHHHHHHHHHHHHHHHHHHhccc---CCCCCcchhhHHHHHHHHHHHHH
Confidence 4566788899999999888766542 22 33555555666666654332100 00111112233333333445566
Q ss_pred HHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhhhhHhhhhHHhhhh
Q 018496 260 SQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSF 319 (355)
Q Consensus 260 ~~~~~~~~i~~~~~~~~si~~~~~~v~siils~~~fge~~t~~~~iG~~lv~~Gi~~~~~ 319 (355)
.+.+.+.++++.++...+++.++.|+++.+++++++||+++..+|+|+.+++.|+.+...
T Consensus 76 ~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~ 135 (281)
T TIGR03340 76 YFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL 135 (281)
T ss_pred HHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence 777888899999999999999999999999999999999999999999999999876543
No 44
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=98.49 E-value=3.8e-07 Score=85.16 Aligned_cols=221 Identities=14% Similarity=0.203 Sum_probs=121.5
Q ss_pred HHHHHH-HHHHHHHhHHhhhcCchhHHHHHhhhchHHHHHHHHHHhccccCchhhHHHHHHHHhhHHhhccCCCCCCCCC
Q 018496 91 CLVSMS-NILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPY 169 (355)
Q Consensus 91 ~~~~~~-~~~~~~~~~~sl~~ls~~~~~i~ks~~pi~v~i~~~l~~~~k~s~~~~ls~~li~~Gv~l~~~~~~~~~~~~~ 169 (355)
...|+. ...+..+++.|+.+.|.+..+-+-+...++..+++..++|||++++++.++.+++.|+.++....+ .+.+..
T Consensus 53 W~~G~~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~-~~~~~~ 131 (300)
T PF05653_consen 53 WWIGLLLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAP-KEEPIH 131 (300)
T ss_pred HHHHHHHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCC-CCCCcC
Confidence 345543 466778999999999998877778889999999999999999999999999999999987764421 111111
Q ss_pred CCCCCchH------HH---HHHHHHHHHHHHhhHHHHHHHHccCCCChhhHHHHhhHHHHHHHHHHHHH---hCchHHHH
Q 018496 170 SKGRENTV------WG---VSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLIL---EGHLFLAI 237 (355)
Q Consensus 170 ~~~~~~~~------~G---~~~~~~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~g~~~~~~ 237 (355)
+..++ .+ +........ ..+.-...++++. .+++.|....+.+-..-.... ..-+.+..
T Consensus 132 ---t~~~l~~~~~~~~fl~y~~~~~~~~-----~~L~~~~~~r~g~--~~i~vyi~i~sl~Gs~tvl~~K~i~~~i~~~~ 201 (300)
T PF05653_consen 132 ---TLDELIALLSQPGFLVYFILVLVLI-----LILIFFIKPRYGR--RNILVYISICSLIGSFTVLSAKAISILIKLTF 201 (300)
T ss_pred ---CHHHHHHHhcCcceehhHHHHHHHH-----HHHHHhhcchhcc--cceEEEEEEeccccchhhhHHHHHHHHHHHHh
Confidence 00111 11 111111111 1111111222221 122333332221111100000 00000000
Q ss_pred H--HhhhChHHHHHHHHHHHHHHHHH-HHHHHHHhhhChHHHHHHHHH-HHHHHHHHHHHHcCC--CCchhhh----hhh
Q 018496 238 D--FVYHHLDCFFDVALLSTVATTSQ-FFISYTIRTFGALTFATIMTT-RQLVSIVLSCVWFRH--PLSWEQC----IGS 307 (355)
Q Consensus 238 ~--~~~~~~~~~~~ll~~~~~~~~~~-~~~~~~i~~~~~~~~si~~~~-~~v~siils~~~fge--~~t~~~~----iG~ 307 (355)
. ..-.+|..|..++.+ +...+.| .+...+++++++.....+.+. -...+++-|.++|+| ..++.++ .|.
T Consensus 202 ~g~~~f~~~~~y~l~~~~-v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~ 280 (300)
T PF05653_consen 202 SGDNQFTYPLTYLLLLVL-VVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGF 280 (300)
T ss_pred cCchhhhhhHHHHHHHHH-HHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHH
Confidence 0 011344444433333 3446666 466679999998765544433 456778888888997 4566444 566
Q ss_pred hHhhhhHHhhhhhccc
Q 018496 308 IIVFGALYTRSFFKKV 323 (355)
Q Consensus 308 ~lv~~Gi~~~~~~k~k 323 (355)
.+++.|+++-...|++
T Consensus 281 ~~ii~GV~lL~~~~~~ 296 (300)
T PF05653_consen 281 LIIIIGVFLLSSSKDK 296 (300)
T ss_pred HHHHHhhheeeccCch
Confidence 6677887775554443
No 45
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=98.34 E-value=1.8e-05 Score=72.25 Aligned_cols=132 Identities=10% Similarity=0.003 Sum_probs=93.4
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCceeehHHHHHHHHHHHHHHHHHHHHhhcCCCCC-CCchhHHHHHH
Q 018496 16 VLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDP-VAPVYKYCLVS 94 (355)
Q Consensus 16 ~~~~~~~~~g~~~~~~~~~~~~e~i~~~~~~~~~~~f~~p~~l~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~ 94 (355)
..+..+....-.+++..+.+++|+..++ ++ +.+......++.++.++..+.....++.... ...+...+..+
T Consensus 126 ~~~G~~~~l~a~~~~a~~~~~~k~~~~~-~~------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (260)
T TIGR00950 126 NPAGLLLGLGSGISFALGTVLYKRLVKK-EG------PELLQFTGWVLLLGALLLLPFAWFLGPNPQALSLQWGALLYLG 198 (260)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhHHhhc-CC------chHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHH
Confidence 3455566667778888899998888642 22 1123334456777776665544433322211 11222234455
Q ss_pred HH-HHHHHHHhHHhhhcCchhHHHHHhhhchHHHHHHHHHHhccccCchhhHHHHHHHHhh
Q 018496 95 MS-NILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGC 154 (355)
Q Consensus 95 ~~-~~~~~~~~~~sl~~ls~~~~~i~ks~~pi~v~i~~~l~~~~k~s~~~~ls~~li~~Gv 154 (355)
++ ...+..+.+.++++++.+...++..+.|++++++++++++|++++.++.++.+++.|+
T Consensus 199 ~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 199 LIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 54 4577788999999999999999999999999999999999999999999999999986
No 46
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.28 E-value=3.6e-05 Score=61.32 Aligned_cols=103 Identities=16% Similarity=0.182 Sum_probs=73.4
Q ss_pred HHHHHHHHHHHHHhCchHHHHHHhhhChHHHHHHHHHHHHHH-HHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHc
Q 018496 217 LCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVAT-TSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWF 295 (355)
Q Consensus 217 ~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~ll~~~~~~~-~~~~~~~~~i~~~~~~~~si~~~~~~v~siils~~~f 295 (355)
.++.+...+.....+...+..+...+++.. ..+..+.++. .+..+.+.++++.++ .++++..+.|+++.+++.++|
T Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~ 82 (113)
T PF13536_consen 6 LFSVLFLLIILLIRGRLRDLFRALRRKPWL--WLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFF 82 (113)
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHhCcHH--HHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHh
Confidence 345555555555555544333333333322 3334455544 556777788999985 777999999999999999999
Q ss_pred CCCCchhhhhhhhHhhhhHHhhhhhcc
Q 018496 296 RHPLSWEQCIGSIIVFGALYTRSFFKK 322 (355)
Q Consensus 296 ge~~t~~~~iG~~lv~~Gi~~~~~~k~ 322 (355)
+|+++..+|+|+.+++.|+.+..+..-
T Consensus 83 ~er~~~~~~~a~~l~~~Gv~li~~~~~ 109 (113)
T PF13536_consen 83 KERLSPRRWLAILLILIGVILIAWSDL 109 (113)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence 999999999999999999988777654
No 47
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=98.26 E-value=3.4e-05 Score=74.04 Aligned_cols=139 Identities=14% Similarity=0.113 Sum_probs=101.6
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHccCCCChhhHHHHhhHHHHHHHHHHHHHhCchHHHHHHhhhChHHHHHHHHHHHHHH
Q 018496 179 GVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVAT 258 (355)
Q Consensus 179 G~~~~~~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~ll~~~~~~~ 258 (355)
-.+.++.-.++++-..++.+..++ .+.++....+|=..++.++.+++....... + .....+...|..+.+.++++.
T Consensus 14 ~~~~~~~~q~~~~~~~~~~k~a~~-~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~-~--~~~~~~~~~~~~l~l~g~~g~ 89 (358)
T PLN00411 14 FLTAMLATETSVVGISTLFKVATS-KGLNIYPFLGYSYLLASLLLLPSLFFTNRS-R--SLPPLSVSILSKIGLLGFLGS 89 (358)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHH-CCCCccHHHHHHHHHHHHHHHHHHHHHHHh-c--ccCcchHHHHHHHHHHHHHHH
Confidence 455556667778888888887775 478888888888888887777765432110 0 000011223444555566664
Q ss_pred HHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHH------cCCCCchhhhhhhhHhhhhHHhhhhhc
Q 018496 259 TSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVW------FRHPLSWEQCIGSIIVFGALYTRSFFK 321 (355)
Q Consensus 259 ~~~~~~~~~i~~~~~~~~si~~~~~~v~siils~~~------fge~~t~~~~iG~~lv~~Gi~~~~~~k 321 (355)
+.+.+.+..+++++|...+++.++.|+++.++++++ ++|+++..+++|+.+.+.|+.+....+
T Consensus 90 ~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~ 158 (358)
T PLN00411 90 MYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYH 158 (358)
T ss_pred HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHcc
Confidence 455677889999999999999999999999999999 699999999999999999987765543
No 48
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.22 E-value=5.9e-05 Score=61.46 Aligned_cols=122 Identities=9% Similarity=0.090 Sum_probs=81.7
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHccCCCChhhHHHHhhHHHHHHHHHHHHHhCchHHHHHHhhhChHHHHHHHHHHH-H
Q 018496 178 WGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLST-V 256 (355)
Q Consensus 178 ~G~~~~~~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~ll~~~~-~ 256 (355)
.|+++++.+.++.+...++-|+=.++.+..+.. . ..+ ... ....+|..+ ++.++ +
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~~~~~--~-----~~~---~~~-----------~~~~~p~~~---i~lgl~~ 57 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMSRLPLLSHA--W-----DFI---AAL-----------LAFGLALRA---VLLGLAG 57 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhCCCccch--h-----HHH---HHH-----------HHHhccHHH---HHHHHHH
Confidence 377888888888888777777655544321110 0 000 000 000233212 12232 3
Q ss_pred HHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHH--HcCCCCchhhhhhhhHhhhhHHhhhhhccc
Q 018496 257 ATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCV--WFRHPLSWEQCIGSIIVFGALYTRSFFKKV 323 (355)
Q Consensus 257 ~~~~~~~~~~~i~~~~~~~~si~~~~~~v~siils~~--~fge~~t~~~~iG~~lv~~Gi~~~~~~k~k 323 (355)
..++.+++.+++++.+...+..+...-.+...+.++. +|||++|+.+++|+++++.|++.....++|
T Consensus 58 ~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~~ 126 (129)
T PRK02971 58 YALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTTK 126 (129)
T ss_pred HHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCCC
Confidence 4556678889999999999998888888888888875 899999999999999999999887654443
No 49
>COG2510 Predicted membrane protein [Function unknown]
Probab=98.21 E-value=1.7e-05 Score=63.08 Aligned_cols=104 Identities=11% Similarity=0.077 Sum_probs=77.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCCCCC---CCchhHHH-HHHHHHHHHHHHhHHhhhcCchhHHHHHhhhchHHHHHH
Q 018496 55 SLFLVFCNRLMTSAVSAGTLIASRKAIDP---VAPVYKYC-LVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIW 130 (355)
Q Consensus 55 p~~l~~~~~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~sl~~ls~~~~~i~ks~~pi~v~i~ 130 (355)
|.+-++.|.++..+.+...+...++...+ ...-+.++ .-|+....+-.+.|.|++.-..|-..-+..++|+++.++
T Consensus 31 p~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl~Yf~ALk~G~as~VvPldk~svvl~~ll 110 (140)
T COG2510 31 PDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLL 110 (140)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHHHHHHHHhcCCcceEEEcccccHHHHHHH
Confidence 66788899888887776666655432222 11223344 445556677789999999876665555677889999999
Q ss_pred HHHHhccccCchhhHHHHHHHHhhHHhh
Q 018496 131 GTLIMQKRYKGYDYFLALLVTLGCSIFI 158 (355)
Q Consensus 131 ~~l~~~~k~s~~~~ls~~li~~Gv~l~~ 158 (355)
+++++|||++..+|++++++++|+.+.+
T Consensus 111 s~lfL~E~ls~~~~iG~~LI~~Gailvs 138 (140)
T COG2510 111 SILFLGERLSLPTWIGIVLIVIGAILVS 138 (140)
T ss_pred HHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence 9999999999999999999999998754
No 50
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=98.14 E-value=6e-05 Score=63.00 Aligned_cols=135 Identities=10% Similarity=0.125 Sum_probs=93.2
Q ss_pred HHHHHHHHHHHHHHHHhhhhcccCCCCCCCceeehHHHHHHHHHHHHHHHHHHHHh-hcCCC-------C------CCCc
Q 018496 21 FAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIA-SRKAI-------D------PVAP 86 (355)
Q Consensus 21 ~~~~g~~~~~~~~~~~~e~i~~~~~~~~~~~f~~p~~l~~~~~~~~~l~~~~~~~~-~~~~~-------~------~~~~ 86 (355)
++.....++...+.+++|+.++++- .++.+.+ |..+.......+.+...+.... .+.+. . ....
T Consensus 3 ~~~l~s~~~~al~~v~~~~~~~~~~-~~~~~~~-~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 3 ILALASSLFSALRNVLIKKLLKKVS-SNSKKLN-PLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccc-ccccCCC-HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 3455667788888899999887631 1223344 4444555555555554443322 21110 0 0011
Q ss_pred hhHHHHHHHHHHHHHHHhHHhhhcCchhHHHHHhhhchHHHHHHHHHHhccccCchhhHHHHHHHHhhHHh
Q 018496 87 VYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIF 157 (355)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~sl~~ls~~~~~i~ks~~pi~v~i~~~l~~~~k~s~~~~ls~~li~~Gv~l~ 157 (355)
+...+..+++.+..+...+..++++|.-++.+....|.+.+.++++++++|+++..++.++.+.+.|+.+.
T Consensus 81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Y 151 (153)
T PF03151_consen 81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLY 151 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhee
Confidence 22234556677888899999999999999999999999999999999999999999999999999998764
No 51
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=98.10 E-value=0.00016 Score=67.50 Aligned_cols=133 Identities=8% Similarity=0.051 Sum_probs=94.1
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCceeehHHHHHHHHHHHHHHHHHHHHhhcCCCC--C-CCchhHHHHHH
Q 018496 18 KMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAID--P-VAPVYKYCLVS 94 (355)
Q Consensus 18 ~~~~~~~g~~~~~~~~~~~~e~i~~~~~~~~~~~f~~p~~l~~~~~~~~~l~~~~~~~~~~~~~~--~-~~~~~~~~~~~ 94 (355)
...+...+...+|..+++.+|+..+. .+...+..|+.++.+...+.......... + ...+...+..+
T Consensus 150 ~G~l~~l~a~~~~a~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~ 219 (292)
T PRK11272 150 WGAILILIASASWAFGSVWSSRLPLP----------VGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLA 219 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCC----------cchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHH
Confidence 34555666678888888888886421 12335567777776665443333221111 1 11222334445
Q ss_pred HH-HHHHHHHhHHhhhcCchhHHHHHhhhchHHHHHHHHHHhccccCchhhHHHHHHHHhhHHhhcc
Q 018496 95 MS-NILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILF 160 (355)
Q Consensus 95 ~~-~~~~~~~~~~sl~~ls~~~~~i~ks~~pi~v~i~~~l~~~~k~s~~~~ls~~li~~Gv~l~~~~ 160 (355)
+. ...+..+.+.++++++.+...++....|++.+++++++++|++++.++++..+++.|+.+....
T Consensus 220 i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~ 286 (292)
T PRK11272 220 VFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLG 286 (292)
T ss_pred HHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 54 4566789999999999999999999999999999999999999999999999999999887543
No 52
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.09 E-value=9.1e-05 Score=58.79 Aligned_cols=64 Identities=9% Similarity=-0.027 Sum_probs=56.8
Q ss_pred HHHHHHHHHhHHhhhcCchhHHHHHhhhchHHHHHHHHHHhccccCchhhHHHHHHHHhhHHhh
Q 018496 95 MSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFI 158 (355)
Q Consensus 95 ~~~~~~~~~~~~sl~~ls~~~~~i~ks~~pi~v~i~~~l~~~~k~s~~~~ls~~li~~Gv~l~~ 158 (355)
+++..+..+...+++.+|.+.+-.+.+..++.+++++++++|||++++|++++.++++|+++..
T Consensus 45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 3456777888899999999877667779999999999999999999999999999999998864
No 53
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=97.94 E-value=0.00045 Score=62.90 Aligned_cols=141 Identities=13% Similarity=0.126 Sum_probs=104.1
Q ss_pred hHHHHHHHHHHHHHHHhhHHHHHHHHccCCCChhhHHHHhhHHHHHHHHHHHHHhCchHHHHHHhhhChHHHHHHHHHHH
Q 018496 176 TVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLST 255 (355)
Q Consensus 176 ~~~G~~~~~~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~ll~~~~ 255 (355)
..-|+++.+.+-+.+|+.-.+.+-+ + +.++.++..+--.++.++.........+..+..+ ..++|..+....+.+.
T Consensus 5 ~~~Gil~~l~Ay~lwG~lp~y~kll-~--~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~-~~~~p~~~~~~~l~a~ 80 (293)
T COG2962 5 SRKGILLALLAYLLWGLLPLYFKLL-E--PLPATEILAHRVIWSFPFMLALLFLLRQWRELKQ-LLKQPKTLLMLALTAL 80 (293)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHH-c--cCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH-HHhCcHHHHHHHHHHH
Confidence 3468999999999999988776554 3 4678899999888998887766555544333222 3356655443322222
Q ss_pred HHHHHHHHHH-HHHhhhChHHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhhhhHhhhhHHhhhhhc
Q 018496 256 VATTSQFFIS-YTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFK 321 (355)
Q Consensus 256 ~~~~~~~~~~-~~i~~~~~~~~si~~~~~~v~siils~~~fge~~t~~~~iG~~lv~~Gi~~~~~~k 321 (355)
. ...|...| .+..+-..+.+|.--...|.+.+++|.++++|.++..||+..++...|+....+.+
T Consensus 81 l-i~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~ 146 (293)
T COG2962 81 L-IGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLL 146 (293)
T ss_pred H-HHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc
Confidence 1 23454444 47888899999999999999999999999999999999999999999987766643
No 54
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=97.94 E-value=0.00028 Score=66.24 Aligned_cols=127 Identities=11% Similarity=0.028 Sum_probs=93.3
Q ss_pred hhHHHHHHHHccCCCC--hhhHHHHhhHHHHHHHHHHHHHhCchHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHHHHh
Q 018496 192 FTSTFQDKLFKGYDME--IHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIR 269 (355)
Q Consensus 192 ~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~i~ 269 (355)
.+.+.||++.++...+ +.-+.+.......+...+.....+. .......+...+..+++..++..+.+.+++
T Consensus 14 ~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~al~ 86 (303)
T PF08449_consen 14 SYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKF-------PKSRKIPLKKYAILSFLFFLASVLSNAALK 86 (303)
T ss_pred HHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccc-------cCCCcChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567899998875444 6666666666666655544333320 001112233444556666777778888999
Q ss_pred hhChHHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhhhhHhhhhHHhhhhhccccC
Q 018496 270 TFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSE 325 (355)
Q Consensus 270 ~~~~~~~si~~~~~~v~siils~~~fge~~t~~~~iG~~lv~~Gi~~~~~~k~k~~ 325 (355)
+.+--+..+.-..+++.+.+++.+++|++.+..++++..++..|+......+.+++
T Consensus 87 ~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~ 142 (303)
T PF08449_consen 87 YISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSS 142 (303)
T ss_pred hCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccc
Confidence 99999999999999999999999999999999999999999999988887765544
No 55
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=97.92 E-value=0.00036 Score=65.40 Aligned_cols=123 Identities=11% Similarity=0.088 Sum_probs=86.4
Q ss_pred HHHhhHHHHHHHHccCCCChhhHHHHhhHHHHHHHHHHHHHhCchHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHHHH
Q 018496 189 FDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTI 268 (355)
Q Consensus 189 ~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~i 268 (355)
++.-.++++|..++++ ..|..+.+.....+.+...+.. ..+.. + ....+.+.|..++..+++.+..+.+.+.++
T Consensus 13 ~~~~~~~~NK~~l~~~-~~P~~~~~~~~~~~~~~~~~~~-~~~~~-~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l 86 (302)
T TIGR00817 13 LNVYFNIYNKKLLNVF-PYPYFKTLISLAVGSLYCLLSW-SSGLP-K---RLKISSALLKLLLPVAIVHTIGHVTSNVSL 86 (302)
T ss_pred HHHHHHHHHHHHHhhC-ChhHHHHHHHHHHHHHHHHHHH-HhCCC-C---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444556788888754 3466666655555544433221 11110 0 001123456666667777777777888899
Q ss_pred hhhChHHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhhhhHhhhhHHhh
Q 018496 269 RTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTR 317 (355)
Q Consensus 269 ~~~~~~~~si~~~~~~v~siils~~~fge~~t~~~~iG~~lv~~Gi~~~ 317 (355)
++.++...+++..+.|+++.+++.++++|+++..+++|..++++|+...
T Consensus 87 ~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~ 135 (302)
T TIGR00817 87 SKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALA 135 (302)
T ss_pred HhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhh
Confidence 9999999999999999999999999999999999999999999987653
No 56
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=97.90 E-value=0.00055 Score=63.90 Aligned_cols=132 Identities=8% Similarity=-0.077 Sum_probs=89.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCceeehHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCc-hhHHHHHHHH-
Q 018496 19 MIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAP-VYKYCLVSMS- 96 (355)
Q Consensus 19 ~~~~~~g~~~~~~~~~~~~e~i~~~~~~~~~~~f~~p~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~- 96 (355)
..+...+.-++|..|.++.++..++ ++ |.... .+++++.++................. +...+..++.
T Consensus 149 G~ll~l~aa~~~a~~~v~~r~~~~~-~~--------~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~lgv~~ 218 (293)
T PRK10532 149 GAALALGAGACWAIYILSGQRAGAE-HG--------PATVA-IGSLIAALIFVPIGALQAGEALWHWSILPLGLAVAILS 218 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcc-CC--------chHHH-HHHHHHHHHHHHHHHHccCcccCCHHHHHHHHHHHHHH
Confidence 3445556667888888888887543 22 33333 34444444443332322211111111 1112345554
Q ss_pred HHHHHHHhHHhhhcCchhHHHHHhhhchHHHHHHHHHHhccccCchhhHHHHHHHHhhHHhhcc
Q 018496 97 NILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILF 160 (355)
Q Consensus 97 ~~~~~~~~~~sl~~ls~~~~~i~ks~~pi~v~i~~~l~~~~k~s~~~~ls~~li~~Gv~l~~~~ 160 (355)
..++..+.+.++++++.+...+.....|++..++++++++|++++.++++..++++|++.....
T Consensus 219 t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~ 282 (293)
T PRK10532 219 TALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLT 282 (293)
T ss_pred HHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhc
Confidence 4567778999999999999999999999999999999999999999999999999999888655
No 57
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=97.83 E-value=0.00047 Score=66.07 Aligned_cols=138 Identities=7% Similarity=-0.044 Sum_probs=95.9
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHccCCCChhhHHHHhhHHHHHHHHHHHHHhCchHHHHHHhhhChHHHHHHHHHHHH
Q 018496 177 VWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTV 256 (355)
Q Consensus 177 ~~G~~~~~~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~ll~~~~~ 256 (355)
+.-..+++.--.++..++...|.+++..+ -|+.+..+-..++.++..+.+. .+. .+..++ ......+..++..+++
T Consensus 48 ~~~~~~~~~wy~~s~~~~~~nK~vl~~~~-~P~~l~~~~~~~~~l~~~~~~~-~~~-~~~~~~-~~~~~~~~~llp~gl~ 123 (350)
T PTZ00343 48 WKLALLFLTWYALNVLYVVDNKLALNMLP-LPWTISSLQLFVGWLFALLYWA-TGF-RKIPRI-KSLKLFLKNFLPQGLC 123 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCC-hhHHHHHHHHHHHHHHHHHHHH-hCC-CCCCCC-CCHHHHHHHHHHHHHH
Confidence 33344555555566677888888887653 2777777766666555433321 111 000000 0011245566667777
Q ss_pred HHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhhhhHhhhhHHhhh
Q 018496 257 ATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRS 318 (355)
Q Consensus 257 ~~~~~~~~~~~i~~~~~~~~si~~~~~~v~siils~~~fge~~t~~~~iG~~lv~~Gi~~~~ 318 (355)
+..++...+.++++.++..++++..+.|+++.+++.++++|+++..+++|..++++|+.+..
T Consensus 124 ~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~ 185 (350)
T PTZ00343 124 HLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALAS 185 (350)
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHhee
Confidence 76666666678999999999999999999999999999999999999999999999977644
No 58
>PRK11689 aromatic amino acid exporter; Provisional
Probab=97.82 E-value=0.00065 Score=63.49 Aligned_cols=129 Identities=12% Similarity=-0.047 Sum_probs=87.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCceeehHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCchh---HHHHHHH
Q 018496 19 MIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVY---KYCLVSM 95 (355)
Q Consensus 19 ~~~~~~g~~~~~~~~~~~~e~i~~~~~~~~~~~f~~p~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 95 (355)
..+....--++|..|.+++|+..++ ++ |... .....+..+...... .... ....++. ..+..++
T Consensus 157 G~~~~l~aa~~~A~~~v~~k~~~~~-~~--------~~~~--~~~~~~~~l~~~~~~-~~~~-~~~~~~~~~~~l~~~~~ 223 (295)
T PRK11689 157 SYGLAFIGAFIWAAYCNVTRKYARG-KN--------GITL--FFILTALALWIKYFL-SPQP-AMVFSLPAIIKLLLAAA 223 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCC-CC--------chhH--HHHHHHHHHHHHHHH-hcCc-cccCCHHHHHHHHHHHH
Confidence 4456667788899999999997533 22 2221 122222222221222 2211 1111222 2233444
Q ss_pred HHHHHHHHhHHhhhcCchhHHHHHhhhchHHHHHHHHHHhccccCchhhHHHHHHHHhhHHhhcc
Q 018496 96 SNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILF 160 (355)
Q Consensus 96 ~~~~~~~~~~~sl~~ls~~~~~i~ks~~pi~v~i~~~l~~~~k~s~~~~ls~~li~~Gv~l~~~~ 160 (355)
....+..+.+.++++++.+...+.-+..|++..++++++++|++++.++++.++++.|+.+....
T Consensus 224 ~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~ 288 (295)
T PRK11689 224 AMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLA 288 (295)
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhh
Confidence 45667789999999999998888999999999999999999999999999999999999887543
No 59
>PRK13499 rhamnose-proton symporter; Provisional
Probab=97.80 E-value=0.03 Score=53.25 Aligned_cols=227 Identities=13% Similarity=0.024 Sum_probs=117.6
Q ss_pred HHHHHHHHHHHHHhHHhhhcCchhHHH-HHhhhchHHHHHHHHHHhcccc---C----chhhHHHHHHHHhhHHhhccCC
Q 018496 91 CLVSMSNILTTTCQYEALKYVSFPVQT-LAKCAKMIPVMIWGTLIMQKRY---K----GYDYFLALLVTLGCSIFILFPS 162 (355)
Q Consensus 91 ~~~~~~~~~~~~~~~~sl~~ls~~~~~-i~ks~~pi~v~i~~~l~~~~k~---s----~~~~ls~~li~~Gv~l~~~~~~ 162 (355)
++-|++...++..+..+.+|+..+... +..-...+...++..++++|-. + ..-.++++++++|+++......
T Consensus 77 ~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~ 156 (345)
T PRK13499 77 FLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQ 156 (345)
T ss_pred HHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhh
Confidence 356677788899999999997654322 1122334555566666676533 2 3357789999999999887211
Q ss_pred CCCCCCCC--CCCCchHHHHHHHHHHHHHHHhhH-------HHHHHHHccCCCChhhHHHHhhH---HHHH-HHHHHHHH
Q 018496 163 GADLSPYS--KGRENTVWGVSLMVGYLGFDGFTS-------TFQDKLFKGYDMEIHNQIFYTTL---CSCV-LSLSGLIL 229 (355)
Q Consensus 163 ~~~~~~~~--~~~~~~~~G~~~~~~s~~~~a~~~-------v~~~~~~~~~~~~~~~~~~~~~~---~~~i-~~~~~~~~ 229 (355)
..|.+... ++..+...|+++++++.+.++.++ ...+...+ .+.++.....-... .+.. ..+.++..
T Consensus 157 ~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~-~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~ 235 (345)
T PRK13499 157 LKERKMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAA-LGVDPLYAALPSYVVIMGGGAITNLGFCFI 235 (345)
T ss_pred hcccccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhh-cCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11211110 112456789999999999999988 44333211 23343222211111 1111 12222221
Q ss_pred ---hCc-hHHHHHHhhhChHHHHHHHHHHHHH---HHHHHHHHHHHhhhChHHHH----HHHHHHHHHHHHHHHHHcCCC
Q 018496 230 ---EGH-LFLAIDFVYHHLDCFFDVALLSTVA---TTSQFFISYTIRTFGALTFA----TIMTTRQLVSIVLSCVWFRHP 298 (355)
Q Consensus 230 ---~g~-~~~~~~~~~~~~~~~~~ll~~~~~~---~~~~~~~~~~i~~~~~~~~s----i~~~~~~v~siils~~~fge~ 298 (355)
.++ .....++....+..+...+.-.+.| .+++.++...-++.+..... +-..+--+++.+.++ +++|.
T Consensus 236 ~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~ 314 (345)
T PRK13499 236 RLAKNKDLSLKADFSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEW 314 (345)
T ss_pred HHhhCCCcccchhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhc
Confidence 111 1000011001111133322222222 23334444445555433322 333666688999998 49986
Q ss_pred Cc------hhhhhhhhHhhhhHHhhhh
Q 018496 299 LS------WEQCIGSIIVFGALYTRSF 319 (355)
Q Consensus 299 ~t------~~~~iG~~lv~~Gi~~~~~ 319 (355)
=+ ..-++|.++++.|..+..+
T Consensus 315 K~a~~k~~~~l~~G~vliI~g~~lig~ 341 (345)
T PRK13499 315 KGASRRPVRVLSLGCVVIILAANIVGL 341 (345)
T ss_pred cCCCccchhHHHHHHHHHHHHHHHHhh
Confidence 55 5668899998887665443
No 60
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=97.76 E-value=0.00088 Score=62.72 Aligned_cols=123 Identities=11% Similarity=-0.016 Sum_probs=85.7
Q ss_pred HHHHHHHHHHHhhHHHHHHHHccCCCChhhHHHHhhHHHHHHHHHHHHHhCchHHHHHHhhhChHHHHHHHHHHHHHHHH
Q 018496 181 SLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTS 260 (355)
Q Consensus 181 ~~~~~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~ll~~~~~~~~~ 260 (355)
++.+++.+++|...+..|...+ +.+|....++=..++.+..++... .+ +. .+..++..++....+
T Consensus 7 l~~l~~~~~Wg~~~~~~k~~~~--~~~p~~~~~~R~~~a~~~l~~~~~--~~---------~~--~~~~~~~~g~~~~~~ 71 (299)
T PRK11453 7 VLALLVVVVWGLNFVVIKVGLH--NMPPLMLAGLRFMLVAFPAIFFVA--RP---------KV--PLNLLLGYGLTISFG 71 (299)
T ss_pred HHHHHHHHHHhhhHHHHHHHHh--cCCHHHHHHHHHHHHHHHHHHHhc--CC---------CC--chHHHHHHHHHHHHH
Confidence 3466778899999988887665 468888888877665554433221 10 01 112222334333333
Q ss_pred H-HHHHHHHhh-hChHHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhhhhHhhhhHHhhh
Q 018496 261 Q-FFISYTIRT-FGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRS 318 (355)
Q Consensus 261 ~-~~~~~~i~~-~~~~~~si~~~~~~v~siils~~~fge~~t~~~~iG~~lv~~Gi~~~~ 318 (355)
+ .+.+..+++ .++...+++.++.|+++.++++++++|+++..+++|.++.+.|+.+..
T Consensus 72 ~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~ 131 (299)
T PRK11453 72 QFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLI 131 (299)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhc
Confidence 3 345566776 577888999999999999999999999999999999999999876654
No 61
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=97.65 E-value=0.00048 Score=54.66 Aligned_cols=59 Identities=7% Similarity=0.102 Sum_probs=53.0
Q ss_pred HHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhhhhHhhhhHHhh
Q 018496 259 TSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTR 317 (355)
Q Consensus 259 ~~~~~~~~~i~~~~~~~~si~~~~~~v~siils~~~fge~~t~~~~iG~~lv~~Gi~~~ 317 (355)
+..++...++++.+...+....++..+.+.++|+++|||++++.+++|+++++.|+...
T Consensus 49 l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i 107 (111)
T PRK15051 49 LAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVIL 107 (111)
T ss_pred HHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHH
Confidence 34566777899999999999888999999999999999999999999999999997654
No 62
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=97.64 E-value=0.00098 Score=62.18 Aligned_cols=130 Identities=14% Similarity=0.020 Sum_probs=87.9
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHccCCCChhhHHHHhhHHHHHHHHHH-HHHhCchHHHHHHhhhChHHHHHHHHHHHHH
Q 018496 179 GVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSG-LILEGHLFLAIDFVYHHLDCFFDVALLSTVA 257 (355)
Q Consensus 179 G~~~~~~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~g~~~~~~~~~~~~~~~~~~ll~~~~~~ 257 (355)
|+++++++++++|...+..|++. +.++.+.+. ..++.++.... .....+. ...+..+..-+..+..=
T Consensus 2 ~~l~~lia~~~wGs~g~~~k~~~---g~~~~~~~~--~~~g~l~~~~~~~~~~~~~-------~~~~~~~~~g~l~G~~w 69 (290)
T TIGR00776 2 DILIALIPALFWGSFVLINVKIG---GGPYSQTLG--TTFGALILSIAIAIFVLPE-------FWALSIFLVGLLSGAFW 69 (290)
T ss_pred chHHHHHHHHHHhhhHHHHhccC---CCHHHHHHH--HHHHHHHHHHHHHHHhCCc-------ccccHHHHHHHHHHHHH
Confidence 57888899999999998887654 444544442 22333332222 2211110 01233333222333334
Q ss_pred HHHHHHHHHHHhhhChHHHHHHHH-HHHHHHHHHHHHHcCCCCchhh----hhhhhHhhhhHHhhhhh
Q 018496 258 TTSQFFISYTIRTFGALTFATIMT-TRQLVSIVLSCVWFRHPLSWEQ----CIGSIIVFGALYTRSFF 320 (355)
Q Consensus 258 ~~~~~~~~~~i~~~~~~~~si~~~-~~~v~siils~~~fge~~t~~~----~iG~~lv~~Gi~~~~~~ 320 (355)
..+|++.+.++++.+....-.+.+ +..+++.+++.++|||..+..+ ++|.++++.|+++....
T Consensus 70 ~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~ 137 (290)
T TIGR00776 70 ALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRS 137 (290)
T ss_pred HhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEec
Confidence 568889999999999999877777 8888999999999999999999 99999999997776444
No 63
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.58 E-value=0.0018 Score=51.87 Aligned_cols=63 Identities=16% Similarity=0.185 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHhhhChHH-HHHHHHHHHHHHHHHHHHHcCCCCchhhhhhhhHhhhhHHhhhhh
Q 018496 258 TTSQFFISYTIRTFGALT-FATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFF 320 (355)
Q Consensus 258 ~~~~~~~~~~i~~~~~~~-~si~~~~~~v~siils~~~fge~~t~~~~iG~~lv~~Gi~~~~~~ 320 (355)
.+..++...++++.+-.. .++..-+..+.+.+.|+++|||++|+.+++|+++++.|+......
T Consensus 41 ~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~ 104 (120)
T PRK10452 41 SLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSG 104 (120)
T ss_pred HHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcC
Confidence 344456667788877665 555567888999999999999999999999999999998775443
No 64
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=97.58 E-value=0.002 Score=60.93 Aligned_cols=77 Identities=12% Similarity=0.257 Sum_probs=68.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhhhhHhhhhHHhhhhhcc
Q 018496 246 CFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKK 322 (355)
Q Consensus 246 ~~~~ll~~~~~~~~~~~~~~~~i~~~~~~~~si~~~~~~v~siils~~~fge~~t~~~~iG~~lv~~Gi~~~~~~k~ 322 (355)
.|+..++++++-..++++...+.++++-+..++....-.+++.++|+++++++.++.|++|+.+.++|+........
T Consensus 78 ~~w~y~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~ 154 (334)
T PF06027_consen 78 PWWKYFLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDV 154 (334)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecc
Confidence 34455567888888999999999999999999999999999999999999999999999999999999887666543
No 65
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=97.45 E-value=0.0072 Score=55.46 Aligned_cols=141 Identities=12% Similarity=0.042 Sum_probs=89.6
Q ss_pred hHHHHHHHHHHHHHHHhhHHHHHHHHccCCCChhhHHHHhhHHHHHHHHHHHHHhCchHHHHHHhhhChHHHHHHHHHHH
Q 018496 176 TVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLST 255 (355)
Q Consensus 176 ~~~G~~~~~~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~ll~~~~ 255 (355)
...+....+...+.++......+...+. ..+.....++....+.+...+....... .........+...+.-.+
T Consensus 5 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 78 (292)
T COG0697 5 LLLGLLALLLWGLLWGLSFIALKLAVES-LDPFLFAAALRFLIAALLLLPLLLLEPR-----GLRPALRPWLLLLLLALL 78 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcc-cCChHHHHHHHHHHHHHHHHHHHHhhcc-----cccccccchHHHHHHHHH
Confidence 4456666666667788877776665543 2344444444444444442222111110 000011111222222234
Q ss_pred HHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHH-HHcCCCCchhhhhhhhHhhhhHHhhhhhcc
Q 018496 256 VATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSC-VWFRHPLSWEQCIGSIIVFGALYTRSFFKK 322 (355)
Q Consensus 256 ~~~~~~~~~~~~i~~~~~~~~si~~~~~~v~siils~-~~fge~~t~~~~iG~~lv~~Gi~~~~~~k~ 322 (355)
.....+.+.+..+++.++...+++..+.|+++.+++. ++++|+++..+++|..+.+.|+.+......
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~ 146 (292)
T COG0697 79 GLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGG 146 (292)
T ss_pred HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCC
Confidence 4455667788889999999999999999999999996 667999999999999888999887666544
No 66
>PRK13499 rhamnose-proton symporter; Provisional
Probab=97.36 E-value=0.0067 Score=57.56 Aligned_cols=139 Identities=10% Similarity=0.049 Sum_probs=89.3
Q ss_pred chHHHHHHHHHHHHHHHhhHHHHHHHHccCCCChhhHHHHhh-HHHHHHHHHH---HHHhCchHHHHHHhhhChHHHHHH
Q 018496 175 NTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTT-LCSCVLSLSG---LILEGHLFLAIDFVYHHLDCFFDV 250 (355)
Q Consensus 175 ~~~~G~~~~~~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~---~~~~g~~~~~~~~~~~~~~~~~~l 250 (355)
+...|+++++++.+|+|-..+-+|+ .|++ ++|...-+. +++.++ .|+ .+..+++.+.+ .+.++..+...
T Consensus 4 ~~~~G~~~~~i~~~~~GS~~~p~K~-~k~w---~wE~~W~v~gi~~wl~-~~~~~g~~~~~~f~~~~--~~~~~~~~~~~ 76 (345)
T PRK13499 4 AIILGIIWHLIGGASSGSFYAPFKK-VKKW---SWETMWSVGGIFSWLI-LPWLIAALLLPDFWAYY--SSFSGSTLLPV 76 (345)
T ss_pred hhHHHHHHHHHHHHHhhcccccccc-cCCC---chhHHHHHHHHHHHHH-HHHHHHHHHhhhHHHHH--HhcCHHHHHHH
Confidence 4678999999999999998888876 4433 355553221 122222 221 12223332221 12345555555
Q ss_pred HHHHHHHHHHHHHHHHHHhhhChHH-HHHHHHHHHHHHHHHHHHHcCCCC---c----hhhhhhhhHhhhhHHhhhhh
Q 018496 251 ALLSTVATTSQFFISYTIRTFGALT-FATIMTTRQLVSIVLSCVWFRHPL---S----WEQCIGSIIVFGALYTRSFF 320 (355)
Q Consensus 251 l~~~~~~~~~~~~~~~~i~~~~~~~-~si~~~~~~v~siils~~~fge~~---t----~~~~iG~~lv~~Gi~~~~~~ 320 (355)
++.++.=.+||+..+..+++.|-.. ..+..-+.-+...+.+.+++||-- + ..-.+|.++++.|+.+..+.
T Consensus 77 ~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~A 154 (345)
T PRK13499 77 FLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRA 154 (345)
T ss_pred HHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHh
Confidence 5556666778988889999888665 445555678899999999998632 2 34568888888999888774
No 67
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=97.35 E-value=0.0016 Score=59.15 Aligned_cols=70 Identities=10% Similarity=0.166 Sum_probs=61.4
Q ss_pred HHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhhhhHhhhhHHhhhhhccc
Q 018496 254 STVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKV 323 (355)
Q Consensus 254 ~~~~~~~~~~~~~~i~~~~~~~~si~~~~~~v~siils~~~fge~~t~~~~iG~~lv~~Gi~~~~~~k~k 323 (355)
+++-.+.+...|.++++.+|.+..+....|.+++.++++++++++++..||++..+.+.|+.........
T Consensus 24 A~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~ 93 (244)
T PF04142_consen 24 ALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQ 93 (244)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcc
Confidence 4444556678889999999999999999999999999999999999999999999999998886665443
No 68
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.31 E-value=0.002 Score=59.52 Aligned_cols=222 Identities=13% Similarity=0.159 Sum_probs=124.5
Q ss_pred HHHHH-HHHHHHHhHHhhhcCchhHHHHHhhhchHHHHHHHHHHhccccCchhhHHHHHHHHhhHHhhccCCCCCCCCCC
Q 018496 92 LVSMS-NILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYS 170 (355)
Q Consensus 92 ~~~~~-~~~~~~~~~~sl~~ls~~~~~i~ks~~pi~v~i~~~l~~~~k~s~~~~ls~~li~~Gv~l~~~~~~~~~~~~~~ 170 (355)
..|++ ...+-..++.|+.+.|.+.-+-+-+.+.+...+++..+++||.++...+++.++++|-.++....+ .+.+...
T Consensus 68 w~G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP-~e~~i~t 146 (335)
T KOG2922|consen 68 WAGMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAP-KEQEIES 146 (335)
T ss_pred HHHHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecC-ccccccc
Confidence 34554 456778899999999988777778888899999999999999999999999999999877765422 2221100
Q ss_pred C-CC--CchHHHHH---HHHHHHHHHHhhHHHHHHHHccCCCChhhHHHHhhHHHHHHHHHHHHH--hCchHH-HHH--H
Q 018496 171 K-GR--ENTVWGVS---LMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLIL--EGHLFL-AID--F 239 (355)
Q Consensus 171 ~-~~--~~~~~G~~---~~~~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~g~~~~-~~~--~ 239 (355)
. +. .-.-++++ ...+-.++ ++.-...++++ ..+++-|..+.+.+-.+-.+.. -|...+ .++ .
T Consensus 147 ~~el~~~~~~~~Fliy~~~iil~~~-----il~~~~~p~~g--~tnilvyi~i~s~iGS~tV~svKalg~aiklt~~g~~ 219 (335)
T KOG2922|consen 147 VEEVWELATEPGFLVYVIIIILIVL-----ILIFFYAPRYG--QTNILVYIGICSLIGSLTVMSVKALGIAIKLTFSGNN 219 (335)
T ss_pred HHHHHHHhcCccHHHHHHHHHHHHH-----HHheeeccccc--ccceeehhhHhhhhcceeeeeHHHHHHHHHHHhcCCc
Confidence 0 00 00001211 11111010 11111112332 2345566665555432211100 001000 000 0
Q ss_pred hhhChHHHHHHHHHHHHHHHHH-HHHHHHHhhhChHHHHHHHHH-HHHHHHHHHHHHcCC--CCchhh----hhhhhHhh
Q 018496 240 VYHHLDCFFDVALLSTVATTSQ-FFISYTIRTFGALTFATIMTT-RQLVSIVLSCVWFRH--PLSWEQ----CIGSIIVF 311 (355)
Q Consensus 240 ~~~~~~~~~~ll~~~~~~~~~~-~~~~~~i~~~~~~~~si~~~~-~~v~siils~~~fge--~~t~~~----~iG~~lv~ 311 (355)
...+|..|..++.+..| +.-| .....+++.+++..++.+.++ -..++++-|.++|+| ..+..+ ..|...++
T Consensus 220 ql~~~~ty~~~l~~~~~-~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~~~Gf~ti~ 298 (335)
T KOG2922|consen 220 QLFYPLTWIFLLVVATC-VSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGELCGFVTIF 298 (335)
T ss_pred ccccHHHHHHHHHHHHH-HHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhHHHhh
Confidence 11244444333333333 4445 355668999998887776655 567888889999998 455554 45666677
Q ss_pred hhHHhhhhhcc
Q 018496 312 GALYTRSFFKK 322 (355)
Q Consensus 312 ~Gi~~~~~~k~ 322 (355)
.|+++....|.
T Consensus 299 ~G~flL~~~kd 309 (335)
T KOG2922|consen 299 LGIFLLHRTKD 309 (335)
T ss_pred heeeEeeeecc
Confidence 78777544443
No 69
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.25 E-value=0.008 Score=47.49 Aligned_cols=61 Identities=15% Similarity=0.234 Sum_probs=49.5
Q ss_pred HHHHHHHHHhhhChHH-HHHHHHHHHHHHHHHHHHHcCCCCchhhhhhhhHhhhhHHhhhhh
Q 018496 260 SQFFISYTIRTFGALT-FATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFF 320 (355)
Q Consensus 260 ~~~~~~~~i~~~~~~~-~si~~~~~~v~siils~~~fge~~t~~~~iG~~lv~~Gi~~~~~~ 320 (355)
...+...++++.+-.. .++-.-+..+.+.+.|+++|||++++.+++|+++++.|+......
T Consensus 43 sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~ 104 (110)
T PRK09541 43 SFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL 104 (110)
T ss_pred HHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 3345566788877665 555567888999999999999999999999999999998776543
No 70
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=97.16 E-value=0.0026 Score=51.84 Aligned_cols=70 Identities=16% Similarity=0.189 Sum_probs=55.7
Q ss_pred HHHHH-HHHHHHHHhHHhhhcCchhHHHHHhhhchHHHHHHHHH--HhccccCchhhHHHHHHHHhhHHhhcc
Q 018496 91 CLVSM-SNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTL--IMQKRYKGYDYFLALLVTLGCSIFILF 160 (355)
Q Consensus 91 ~~~~~-~~~~~~~~~~~sl~~ls~~~~~i~ks~~pi~v~i~~~l--~~~~k~s~~~~ls~~li~~Gv~l~~~~ 160 (355)
+..++ ++..+..+.+.+++.++.+.+--+.+..++.+++.++. +++|+.++.|++++.++++|+.+....
T Consensus 51 i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~ 123 (129)
T PRK02971 51 VLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLP 123 (129)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccC
Confidence 44444 56788899999999998877665566666666666664 799999999999999999999997643
No 71
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.13 E-value=0.0065 Score=48.72 Aligned_cols=71 Identities=11% Similarity=0.064 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHHHHhHHhhhcCchhH-HHHHhhhchHHHHHHHHHHhccccCchhhHHHHHHHHhhHHhhcc
Q 018496 90 YCLVSMSNILTTTCQYEALKYVSFPV-QTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILF 160 (355)
Q Consensus 90 ~~~~~~~~~~~~~~~~~sl~~ls~~~-~~i~ks~~pi~v~i~~~l~~~~k~s~~~~ls~~li~~Gv~l~~~~ 160 (355)
....-+++..+..+...+++++|.+. |.+......+.+.+++.++++|+.++.+++++.++++|+.+.-..
T Consensus 33 ~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~ 104 (120)
T PRK10452 33 FILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSG 104 (120)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcC
Confidence 44455567778888889999998874 555556778888899999999999999999999999999887554
No 72
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=97.08 E-value=0.026 Score=46.51 Aligned_cols=129 Identities=13% Similarity=0.153 Sum_probs=84.3
Q ss_pred HHHHHHHHHHHhhHHHHHHHHccCCCChhhHHHHhhHHHHHHHHHHHHHhCchHHHHHHhhhChHHHHHHHHHHHHHHHH
Q 018496 181 SLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTS 260 (355)
Q Consensus 181 ~~~~~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~ll~~~~~~~~~ 260 (355)
++.+.+-.+-++....+.++.++.+ +|+.-.+.+...+++......+..++. ......+.| .|.. .=++++.+.
T Consensus 4 lla~~aG~~i~~q~~~N~~L~~~~g-s~~~as~i~~~~G~i~~~i~~~~~~~~--~~~~~~~~p-~w~~--lGG~lG~~~ 77 (138)
T PF04657_consen 4 LLALLAGALIALQAAFNGQLGKALG-SPLVASFISFGVGFILLLIILLITGRP--SLASLSSVP-WWAY--LGGLLGVFF 77 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC-ccHHHHHHHHHHHHHHHHHHHHHhccc--ccchhccCC-hHHh--ccHHHHHHH
Confidence 3444555555666666666666544 578888888888888777665554442 111111222 2221 125566666
Q ss_pred HHHHHHHHhhhChHHHHHHHHH-HHHHHHHHHHH-Hc---CCCCchhhhhhhhHhhhhHH
Q 018496 261 QFFISYTIRTFGALTFATIMTT-RQLVSIVLSCV-WF---RHPLSWEQCIGSIIVFGALY 315 (355)
Q Consensus 261 ~~~~~~~i~~~~~~~~si~~~~-~~v~siils~~-~f---ge~~t~~~~iG~~lv~~Gi~ 315 (355)
-.+....+++.|+..+...... +-+.+.+++.+ +| ++++++...+|..+++.|+.
T Consensus 78 V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~ 137 (138)
T PF04657_consen 78 VLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVI 137 (138)
T ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHh
Confidence 6667778999999987777665 56667778876 34 35899999999999999875
No 73
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=96.99 E-value=0.022 Score=44.88 Aligned_cols=59 Identities=10% Similarity=0.147 Sum_probs=48.9
Q ss_pred HHHHHHHHHHhhhChHH-HHHHHHHHHHHHHHHHHHHcCCCCchhhhhhhhHhhhhHHhh
Q 018496 259 TSQFFISYTIRTFGALT-FATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTR 317 (355)
Q Consensus 259 ~~~~~~~~~i~~~~~~~-~si~~~~~~v~siils~~~fge~~t~~~~iG~~lv~~Gi~~~ 317 (355)
+..++...++|+.+-.+ .++-.-+..+.+.+.++++|||++++.+++|+++++.|+...
T Consensus 47 ~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l 106 (109)
T PRK10650 47 AAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence 34455566788877655 677778889999999999999999999999999999997653
No 74
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=96.94 E-value=0.0044 Score=58.03 Aligned_cols=120 Identities=13% Similarity=0.050 Sum_probs=83.9
Q ss_pred CchHHHHHHHHHHHHHHHhhHHHHHHHHccCCCChhhHHHHhhHHHHHHHHHHHHHhCchHHHHHHhhhChHHHHHHHHH
Q 018496 174 ENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALL 253 (355)
Q Consensus 174 ~~~~~G~~~~~~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~ll~~ 253 (355)
.++.+|+.+++.++++.+...++||+-..+.+.+.... ++ +.... ..+|. |+.-+..
T Consensus 3 ~~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~-------------------~~--~~~~~-l~~~~-W~~G~~~ 59 (300)
T PF05653_consen 3 TDFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRA-------------------GS--GGRSY-LRRPL-WWIGLLL 59 (300)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc-------------------cc--hhhHH-HhhHH-HHHHHHH
Confidence 46789999999999999999999998755432211000 00 00001 02332 3332222
Q ss_pred HHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhhhhHhhhhHHhhhh
Q 018496 254 STVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSF 319 (355)
Q Consensus 254 ~~~~~~~~~~~~~~i~~~~~~~~si~~~~~~v~siils~~~fge~~t~~~~iG~~lv~~Gi~~~~~ 319 (355)
..+|+...+.++...++...+..+.+.-+++.+++.+++||+++...++|.++++.|......
T Consensus 60 ---~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~ 122 (300)
T PF05653_consen 60 ---MVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVI 122 (300)
T ss_pred ---HhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEE
Confidence 234555556778888888999999999999999999999999999999999999988655443
No 75
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=96.91 E-value=0.015 Score=45.81 Aligned_cols=67 Identities=13% Similarity=0.153 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHHhHHhhhcCchhH-HHHHhhhchHHHHHHHHHHhccccCchhhHHHHHHHHhhHHh
Q 018496 91 CLVSMSNILTTTCQYEALKYVSFPV-QTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIF 157 (355)
Q Consensus 91 ~~~~~~~~~~~~~~~~sl~~ls~~~-~~i~ks~~pi~v~i~~~l~~~~k~s~~~~ls~~li~~Gv~l~ 157 (355)
...-+++..+..+-..+++++|.++ +.+-.....+.+.+.+.++++|+.++.|++++.++++|+.+.
T Consensus 39 ~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l 106 (109)
T PRK10650 39 ILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence 3344456667777788999998874 555555667778889999999999999999999999999875
No 76
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=96.90 E-value=0.014 Score=46.04 Aligned_cols=69 Identities=9% Similarity=0.052 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHHhHHhhhcCchhH-HHHHhhhchHHHHHHHHHHhccccCchhhHHHHHHHHhhHHhhcc
Q 018496 92 LVSMSNILTTTCQYEALKYVSFPV-QTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILF 160 (355)
Q Consensus 92 ~~~~~~~~~~~~~~~sl~~ls~~~-~~i~ks~~pi~v~i~~~l~~~~k~s~~~~ls~~li~~Gv~l~~~~ 160 (355)
..-+++..+..+...+++++|.++ +.+--....+.+.++++++++|+.++.+++++.++++|+++....
T Consensus 35 ~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~ 104 (110)
T PRK09541 35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL 104 (110)
T ss_pred HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 344456677777788999998875 444444567778889999999999999999999999999987544
No 77
>PRK11431 multidrug efflux system protein; Provisional
Probab=96.85 E-value=0.017 Score=45.23 Aligned_cols=68 Identities=10% Similarity=0.040 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHHHhHHhhhcCchhH-HHHHhhhchHHHHHHHHHHhccccCchhhHHHHHHHHhhHHhh
Q 018496 91 CLVSMSNILTTTCQYEALKYVSFPV-QTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFI 158 (355)
Q Consensus 91 ~~~~~~~~~~~~~~~~sl~~ls~~~-~~i~ks~~pi~v~i~~~l~~~~k~s~~~~ls~~li~~Gv~l~~ 158 (355)
+..-+++..+..+-..+++.+|.++ +.+-.....+-+.+.+++++||+.++.+++++.++++|++..-
T Consensus 33 ~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~ 101 (105)
T PRK11431 33 IITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK 101 (105)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence 3444556677777788999998864 5555556777788899999999999999999999999998864
No 78
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=96.81 E-value=0.0087 Score=46.58 Aligned_cols=70 Identities=16% Similarity=0.079 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHHHHhHHhhhcCchhH-HHHHhhhchHHHHHHHHHHhccccCchhhHHHHHHHHhhHHhhc
Q 018496 90 YCLVSMSNILTTTCQYEALKYVSFPV-QTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFIL 159 (355)
Q Consensus 90 ~~~~~~~~~~~~~~~~~sl~~ls~~~-~~i~ks~~pi~v~i~~~l~~~~k~s~~~~ls~~li~~Gv~l~~~ 159 (355)
....-+++..+..+--.|+|++|.++ |.+-.-...+-+.+.++++++|+.++.+++++.++++|++..-.
T Consensus 33 ~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~ 103 (106)
T COG2076 33 SILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL 103 (106)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence 34444556666677779999999875 56655567777888999999999999999999999999987643
No 79
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=96.79 E-value=0.026 Score=51.66 Aligned_cols=118 Identities=8% Similarity=-0.068 Sum_probs=74.4
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCceeehHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHH
Q 018496 16 VLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSM 95 (355)
Q Consensus 16 ~~~~~~~~~g~~~~~~~~~~~~e~i~~~~~~~~~~~f~~p~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (355)
..|.......--+.|..|....+...- ++...-+|+. +--.+.+.++....+++.+.+..++ -...|+
T Consensus 136 ~~kgi~~Ll~stigy~~Y~~~~~~~~~-----~~~~~~lPqa------iGm~i~a~i~~~~~~~~~~~k~~~~-nil~G~ 203 (269)
T PF06800_consen 136 MKKGILALLISTIGYWIYSVIPKAFHV-----SGWSAFLPQA------IGMLIGAFIFNLFSKKPFFEKKSWK-NILTGL 203 (269)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhcCC-----ChhHhHHHHH------HHHHHHHHHHhhcccccccccchHH-hhHHHH
Confidence 345566666667788888888766432 2222323433 2222222232222222223333333 356788
Q ss_pred HHHHHHHHhHHhhhcCchhHHHHHhhhchHHHHHHHHHHhccccCchhhH
Q 018496 96 SNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYF 145 (355)
Q Consensus 96 ~~~~~~~~~~~sl~~ls~~~~~i~ks~~pi~v~i~~~l~~~~k~s~~~~l 145 (355)
++..++.+...|.+.+.+++.-.+..+.++...+.+.+++||+-+++++.
T Consensus 204 ~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~ 253 (269)
T PF06800_consen 204 IWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMI 253 (269)
T ss_pred HHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHH
Confidence 99999999999999988877666666777887888999999998888764
No 80
>PRK11431 multidrug efflux system protein; Provisional
Probab=96.76 E-value=0.034 Score=43.50 Aligned_cols=60 Identities=8% Similarity=0.129 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHhhhChHH-HHHHHHHHHHHHHHHHHHHcCCCCchhhhhhhhHhhhhHHhh
Q 018496 258 TTSQFFISYTIRTFGALT-FATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTR 317 (355)
Q Consensus 258 ~~~~~~~~~~i~~~~~~~-~si~~~~~~v~siils~~~fge~~t~~~~iG~~lv~~Gi~~~ 317 (355)
.+..++...++|+.+-.+ .++-.-+..+.+.+.|+++|||++++.+++|+.+++.|+..-
T Consensus 40 ~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l 100 (105)
T PRK11431 40 IVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGL 100 (105)
T ss_pred HHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhh
Confidence 334456666788877655 677788899999999999999999999999999999997664
No 81
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=96.70 E-value=0.039 Score=42.97 Aligned_cols=60 Identities=13% Similarity=0.242 Sum_probs=49.9
Q ss_pred HHHHHHHHHhhhChHH-HHHHHHHHHHHHHHHHHHHcCCCCchhhhhhhhHhhhhHHhhhh
Q 018496 260 SQFFISYTIRTFGALT-FATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSF 319 (355)
Q Consensus 260 ~~~~~~~~i~~~~~~~-~si~~~~~~v~siils~~~fge~~t~~~~iG~~lv~~Gi~~~~~ 319 (355)
...+...++|+.+-.+ .++-+-...+.+.+.++++|||++++.+++|+.++++|+..-..
T Consensus 43 sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~ 103 (106)
T COG2076 43 SFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL 103 (106)
T ss_pred HHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence 3445556788877654 78888889999999999999999999999999999999876443
No 82
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=96.35 E-value=0.00072 Score=60.04 Aligned_cols=209 Identities=8% Similarity=0.087 Sum_probs=122.3
Q ss_pred HHHHHHHHHHHHhHHhhhcCchhHHHHHh-hhchHHHHHHHHHHhccccCchhh----HHHHHHHHhhHHhhccCCCCCC
Q 018496 92 LVSMSNILTTTCQYEALKYVSFPVQTLAK-CAKMIPVMIWGTLIMQKRYKGYDY----FLALLVTLGCSIFILFPSGADL 166 (355)
Q Consensus 92 ~~~~~~~~~~~~~~~sl~~ls~~~~~i~k-s~~pi~v~i~~~l~~~~k~s~~~~----ls~~li~~Gv~l~~~~~~~~~~ 166 (355)
.-|++...+...++-|.+++.++-+.-+. -+..+-+-+++.+.++|-.+..+. ++++++++|+.+-...+.. +.
T Consensus 64 isG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~-nk 142 (288)
T COG4975 64 ISGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRN-NK 142 (288)
T ss_pred HhhhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeeccc-cc
Confidence 44556677778889999986543221111 112233345778889998887774 4788889999887655311 11
Q ss_pred CCCCCCCCchHHHHHHHHHHHHHHHhhHHHHHHHHccCCCChhhHHHHhhHHHHHHHHHH-HHHhCchHHHHHHhhhChH
Q 018496 167 SPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSG-LILEGHLFLAIDFVYHHLD 245 (355)
Q Consensus 167 ~~~~~~~~~~~~G~~~~~~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~g~~~~~~~~~~~~~~ 245 (355)
..++.++.-.|+..++.|.+-+-.|.+..+. .+.+.+....-.. .+.+..... .....+- . .+..
T Consensus 143 --~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~----f~v~g~saiLPqA-iGMv~~ali~~~~~~~~----~---~~K~ 208 (288)
T COG4975 143 --EEENPSNLKKGIVILLISTLGYVGYVVLFQL----FDVDGLSAILPQA-IGMVIGALILGFFKMEK----R---FNKY 208 (288)
T ss_pred --cccChHhhhhheeeeeeeccceeeeEeeecc----ccccchhhhhHHH-HHHHHHHHHHhhccccc----c---hHHH
Confidence 1112345567888777787777776665432 2344444433332 233332222 2222111 0 1112
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHcCCCCchhhh----hhhhHhhhhHHh
Q 018496 246 CFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQC----IGSIIVFGALYT 316 (355)
Q Consensus 246 ~~~~ll~~~~~~~~~~~~~~~~i~~~~~~~~si~~~~~~v~siils~~~fge~~t~~~~----iG~~lv~~Gi~~ 316 (355)
.|.. +.-++.=.+|+++.+.+-++.+-.+.=..+.+.-+++++-++++++|+=|..++ +|+.+++.|..+
T Consensus 209 t~~n-ii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~ 282 (288)
T COG4975 209 TWLN-IIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAIL 282 (288)
T ss_pred HHHH-HhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhh
Confidence 2322 223444467888888877777776666667777889999999999998887775 667776655443
No 83
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=96.09 E-value=0.067 Score=47.63 Aligned_cols=65 Identities=15% Similarity=0.240 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHHhHHhhhcCchhHHHHHhhhchHHHHHHHHHHhccccCchhhHHHHHHHHhhHH
Q 018496 92 LVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSI 156 (355)
Q Consensus 92 ~~~~~~~~~~~~~~~sl~~ls~~~~~i~ks~~pi~v~i~~~l~~~~k~s~~~~ls~~li~~Gv~l 156 (355)
...+.......+....++|.+..+..+...+.++++.+++.++++++++..+++++.+++.|+.+
T Consensus 157 ~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l 221 (222)
T TIGR00803 157 IVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL 221 (222)
T ss_pred HHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence 34455566667788999999888888888899999999999999999999999999999988754
No 84
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=95.97 E-value=0.055 Score=41.34 Aligned_cols=52 Identities=15% Similarity=0.243 Sum_probs=29.6
Q ss_pred HHHHHHHHHHhhhChHHH-HHHHHHHHHHHHHHHHHHcCCCCchhhhhhhhHh
Q 018496 259 TSQFFISYTIRTFGALTF-ATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIV 310 (355)
Q Consensus 259 ~~~~~~~~~i~~~~~~~~-si~~~~~~v~siils~~~fge~~t~~~~iG~~lv 310 (355)
+..++...++|+.+...+ .+..-+..+.+.+.|+++|||++|+.+++|++++
T Consensus 41 ~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 41 LSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 344566678898887765 6666788999999999999999999999999875
No 85
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=95.88 E-value=0.027 Score=52.81 Aligned_cols=141 Identities=13% Similarity=0.039 Sum_probs=98.8
Q ss_pred chhhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCceeehHHHHHHHHHHHHHHHH-HHHHhh-cCCC------CCCCc
Q 018496 15 RVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSA-GTLIAS-RKAI------DPVAP 86 (355)
Q Consensus 15 ~~~~~~~~~~g~~~~~~~~~~~~e~i~~~~~~~~~~~f~~p~~l~~~~~~~~~l~~~-~~~~~~-~~~~------~~~~~ 86 (355)
-.+....+..+..+.+..-++++|.+.+++ +++.+... +...+.-++.+... +..... +... ....+
T Consensus 160 fn~~G~i~a~~s~~~~al~~I~~~~ll~~~----~~~~~~~~-ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~ 234 (316)
T KOG1441|consen 160 FNLFGFISAMISNLAFALRNILSKKLLTSK----GESLNSMN-LLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVT 234 (316)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHhhhcc----ccccCchH-HHHHhhhHHHHHHhcchHhhhcccceeeeeccccchh
Confidence 345667788888899999999999998632 23444443 44455555555444 433221 1111 11112
Q ss_pred hhHHHHHHHHHHHHHHHhHHhhhcCchhHHHHHhhhchHHHHHHHHHHhccccCchhhHHHHHHHHhhHHhhcc
Q 018496 87 VYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILF 160 (355)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~sl~~ls~~~~~i~ks~~pi~v~i~~~l~~~~k~s~~~~ls~~li~~Gv~l~~~~ 160 (355)
.......++++...+...+..+..+|.-|+.++-..|=+.+...++++++++.++.+.++..+.++|+.+....
T Consensus 235 ~~~~~~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~ 308 (316)
T KOG1441|consen 235 FLILLLNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRA 308 (316)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHH
Confidence 22334555777888899999999999888888887888888888999999999999999999999999987654
No 86
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=95.80 E-value=0.0046 Score=55.68 Aligned_cols=66 Identities=12% Similarity=0.242 Sum_probs=59.9
Q ss_pred HHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhhhhHhhhhHHhhhh
Q 018496 254 STVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSF 319 (355)
Q Consensus 254 ~~~~~~~~~~~~~~i~~~~~~~~si~~~~~~v~siils~~~fge~~t~~~~iG~~lv~~Gi~~~~~ 319 (355)
++.|..|-..+|+++++.+-..+++++...|++++++++++++|+.|....+|..+.+.|+.+...
T Consensus 104 g~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvR 169 (346)
T KOG4510|consen 104 GFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVR 169 (346)
T ss_pred hhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEec
Confidence 667777878889999999999999999999999999999999999999999999999999877543
No 87
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=95.69 E-value=0.36 Score=43.46 Aligned_cols=60 Identities=8% Similarity=-0.012 Sum_probs=52.8
Q ss_pred HHHHhHHhhhcCchhHHHHHhhhchHHHHHHHHHHhccccCchhhHHHHHHHHhhHHhhc
Q 018496 100 TTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFIL 159 (355)
Q Consensus 100 ~~~~~~~sl~~ls~~~~~i~ks~~pi~v~i~~~l~~~~k~s~~~~ls~~li~~Gv~l~~~ 159 (355)
-..+-..+++.++-.++.++.+..|..-.+.++++++|..++.||+++..++.+.+-.+.
T Consensus 223 PYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~l 282 (292)
T COG5006 223 PYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTL 282 (292)
T ss_pred chHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhcccc
Confidence 346777899999999999999999999999999999999999999999999888764443
No 88
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=95.68 E-value=0.1 Score=39.79 Aligned_cols=56 Identities=14% Similarity=0.091 Sum_probs=32.8
Q ss_pred HHHHHHHHHhHHhhhcCchhH-HHHHhhhchHHHHHHHHHHhccccCchhhHHHHHH
Q 018496 95 MSNILTTTCQYEALKYVSFPV-QTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLV 150 (355)
Q Consensus 95 ~~~~~~~~~~~~sl~~ls~~~-~~i~ks~~pi~v~i~~~l~~~~k~s~~~~ls~~li 150 (355)
.++..+..+...+++++|.++ +.+......+.+.+.+.+++||+.++.|++++.++
T Consensus 37 ~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 37 VGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 366777788889999998874 46666677888889999999999999999998764
No 89
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=95.67 E-value=0.75 Score=43.42 Aligned_cols=61 Identities=15% Similarity=0.228 Sum_probs=55.2
Q ss_pred HHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhhhhHhhhhHHhhhhh
Q 018496 260 SQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFF 320 (355)
Q Consensus 260 ~~~~~~~~i~~~~~~~~si~~~~~~v~siils~~~fge~~t~~~~iG~~lv~~Gi~~~~~~ 320 (355)
-+...|.+..+.+|.+..+...+|...+.+++++++++.++..||...++.+.|+.+..+.
T Consensus 105 qNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~ 165 (345)
T KOG2234|consen 105 QNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLP 165 (345)
T ss_pred hhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhcc
Confidence 3356777899999999999999999999999999999999999999999999998887743
No 90
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.60 E-value=0.41 Score=39.81 Aligned_cols=132 Identities=11% Similarity=0.124 Sum_probs=77.5
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHccCCCChhhHHHHhhHHHHHHHHHHHHHhCchHHHHHHhhhChHHHHHHHHHHHHH
Q 018496 178 WGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVA 257 (355)
Q Consensus 178 ~G~~~~~~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~ll~~~~~~ 257 (355)
+..+..+.+-++..+....+.++.+.-+ +|..-.+.....+++......+.... ..........| .|.. +.|
T Consensus 5 l~ll~~i~aG~~l~~Q~~iN~qL~~~~~-spl~As~isf~vGt~~L~~l~l~~~~-~~~~a~~~~~p-wW~~-----~GG 76 (150)
T COG3238 5 LYLLFAILAGALLPLQAAINGRLARYLG-SPLLASLISFLVGTVLLLILLLIKQG-HPGLAAVASAP-WWAW-----IGG 76 (150)
T ss_pred HHHHHHHHHhhhhhhHHHHHHHHHHHcC-ChHHHHHHHHHHHHHHHHHHHHHhcC-CCchhhccCCc-hHHH-----Hcc
Confidence 4455555666666666666667655444 56666666667777666555443211 11112222223 2322 123
Q ss_pred HHHHHHHHH---HHhhhChHHHHHHH-HHHHHHHHHHHHHHcC----CCCchhhhhhhhHhhhhHHhh
Q 018496 258 TTSQFFISY---TIRTFGALTFATIM-TTRQLVSIVLSCVWFR----HPLSWEQCIGSIIVFGALYTR 317 (355)
Q Consensus 258 ~~~~~~~~~---~i~~~~~~~~si~~-~~~~v~siils~~~fg----e~~t~~~~iG~~lv~~Gi~~~ 317 (355)
.+|..+++. ...+.++.++..+. .-+-+.+.+++.+=+. ++++...++|++++++|++..
T Consensus 77 ~lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~ 144 (150)
T COG3238 77 LLGAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLA 144 (150)
T ss_pred chhhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHh
Confidence 444444443 45777777655544 4466777888876544 479999999999999995553
No 91
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=95.19 E-value=0.038 Score=43.68 Aligned_cols=69 Identities=13% Similarity=0.140 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHHHHHhHHhhhcCchhHHHH-HhhhchHHHHHHHHHHhccccCchhhHHHHHHHHhhHHh
Q 018496 89 KYCLVSMSNILTTTCQYEALKYVSFPVQTL-AKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIF 157 (355)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~sl~~ls~~~~~i-~ks~~pi~v~i~~~l~~~~k~s~~~~ls~~li~~Gv~l~ 157 (355)
+|...=+.+-.+....+..+...+.+...- ..++.-++|.+.++++.+|..+++.++++.+++.|+.+.
T Consensus 43 ~y~ipf~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 43 KYIIPFLLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC 112 (113)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence 355444567777778888898877664433 357888999999999888888999999999999998763
No 92
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=95.00 E-value=0.32 Score=40.08 Aligned_cols=102 Identities=9% Similarity=0.087 Sum_probs=67.0
Q ss_pred ehHHHHHHHHHHHHHHHHHHHHhhcCCC---CCCCchhHHHHHHHHHHHHHHHhHHhhhcCchhHHHHHhh-hchHHHHH
Q 018496 54 YSLFLVFCNRLMTSAVSAGTLIASRKAI---DPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKC-AKMIPVMI 129 (355)
Q Consensus 54 ~p~~l~~~~~~~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~sl~~ls~~~~~i~ks-~~pi~v~i 129 (355)
.|+.-++.....+.+++.++....+++. .++.|||.|+ -|++......+...+...+..+..+.+-- -..+..++
T Consensus 29 s~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w~~l-GG~lG~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~ 107 (138)
T PF04657_consen 29 SPLVASFISFGVGFILLLIILLITGRPSLASLSSVPWWAYL-GGLLGVFFVLSNIILVPRLGAALTTILIVAGQLIASLL 107 (138)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChHHhc-cHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHH
Confidence 3666677777788877766655544321 2245777665 56666777777788888887754443322 23444455
Q ss_pred HHHH----HhccccCchhhHHHHHHHHhhHH
Q 018496 130 WGTL----IMQKRYKGYDYFLALLVTLGCSI 156 (355)
Q Consensus 130 ~~~l----~~~~k~s~~~~ls~~li~~Gv~l 156 (355)
+..+ .-+++++++|++++.++++|+.+
T Consensus 108 iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 108 IDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 5543 35699999999999999999864
No 93
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=94.80 E-value=0.24 Score=39.23 Aligned_cols=60 Identities=5% Similarity=0.050 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHhhhChHHHHHH-HHHHHHHHHHHHHHHcCCCCchhhhhhhhHhhhhHHh
Q 018496 257 ATTSQFFISYTIRTFGALTFATI-MTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYT 316 (355)
Q Consensus 257 ~~~~~~~~~~~i~~~~~~~~si~-~~~~~v~siils~~~fge~~t~~~~iG~~lv~~Gi~~ 316 (355)
+..|.+.++..+++.+=+.+..+ +.+.-+++.+.++++.+|..+...++|+.+++.|+.+
T Consensus 51 Nq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L 111 (113)
T PF10639_consen 51 NQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL 111 (113)
T ss_pred HHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence 45566677788888887666655 5788899999998888888899999999999998753
No 94
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=94.58 E-value=0.81 Score=43.15 Aligned_cols=141 Identities=11% Similarity=0.043 Sum_probs=78.7
Q ss_pred CchHHHHHHHHHHHHHHHhhHHHHHHHHccCCCChhhHHHHhhHHHHHHHHHHHH---HhCchHHHHHHhhhCh-HHHHH
Q 018496 174 ENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLI---LEGHLFLAIDFVYHHL-DCFFD 249 (355)
Q Consensus 174 ~~~~~G~~~~~~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~g~~~~~~~~~~~~~-~~~~~ 249 (355)
..-+.|+++..++.++.+...+=.||+ |++ .+|......-+-..+..|+.. .-+++. +.....| +.+..
T Consensus 3 ~~ii~Gii~h~iGg~~~~sfy~P~kkv-k~W---sWEs~Wlv~gi~swli~P~~~a~l~ip~~~---~i~~~~~~~~l~~ 75 (344)
T PF06379_consen 3 SAIILGIIFHAIGGFASGSFYVPFKKV-KGW---SWESYWLVQGIFSWLIVPWLWALLAIPDFF---SIYSATPASTLFW 75 (344)
T ss_pred chHHHHHHHHHHHHHHhhhhccchhhc-CCc---cHHHHHHHHHHHHHHHHHHHHHHHhCCcHH---HHHHhCChhHHHH
Confidence 356789999999999999877766654 333 366655543322223334322 122333 2333333 33444
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCh-HHHHHHHHHHHHHHHHHHHHHcC-------CCCchhhhhhhhHhhhhHHhhhhhc
Q 018496 250 VALLSTVATTSQFFISYTIRTFGA-LTFATIMTTRQLVSIVLSCVWFR-------HPLSWEQCIGSIIVFGALYTRSFFK 321 (355)
Q Consensus 250 ll~~~~~~~~~~~~~~~~i~~~~~-~~~si~~~~~~v~siils~~~fg-------e~~t~~~~iG~~lv~~Gi~~~~~~k 321 (355)
..++++.=-+|.+-+-.++++.+- +..++..-+-.++..++--++.| ++-...-++|.++++.|+....+.-
T Consensus 76 ~~l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG 155 (344)
T PF06379_consen 76 TFLFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAG 155 (344)
T ss_pred HHHHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHH
Confidence 444444433444444456776663 33555555555555555444433 2334567899999999988877653
No 95
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=93.35 E-value=0.47 Score=43.18 Aligned_cols=67 Identities=19% Similarity=0.194 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHhhhChHH-HHHHHHHHHHHHHHHHHH-HcCCC-----CchhhhhhhhHhhhhHHhhhhhcccc
Q 018496 258 TTSQFFISYTIRTFGALT-FATIMTTRQLVSIVLSCV-WFRHP-----LSWEQCIGSIIVFGALYTRSFFKKVS 324 (355)
Q Consensus 258 ~~~~~~~~~~i~~~~~~~-~si~~~~~~v~siils~~-~fge~-----~t~~~~iG~~lv~~Gi~~~~~~k~k~ 324 (355)
+.|+.+..-+++..|=.. ..+-++..-+..-..|-+ +||.+ -.+.+++|+++++.|..++..-|.+.
T Consensus 66 ~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~ 139 (254)
T PF07857_consen 66 ATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEE 139 (254)
T ss_pred hcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCC
Confidence 334544444555555322 333344444455555543 56653 46789999999887766666655544
No 96
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=93.31 E-value=1.3 Score=42.22 Aligned_cols=131 Identities=15% Similarity=0.117 Sum_probs=82.5
Q ss_pred HHHHHHHHHHHHhhhhcccCCCCCCCceeehHHHHHHHHHHHHHHHHHH-HHh--hcC-C--CCCCCchhHHHHHHHH-H
Q 018496 25 GIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGT-LIA--SRK-A--IDPVAPVYKYCLVSMS-N 97 (355)
Q Consensus 25 g~~~~~~~~~~~~e~i~~~~~~~~~~~f~~p~~l~~~~~~~~~l~~~~~-~~~--~~~-~--~~~~~~~~~~~~~~~~-~ 97 (355)
.-.+.|..|..+.|+-. +++|++.+-+++.-+... ++.++.+.. +.. .+. + .++..+....+..++. .
T Consensus 254 ~sA~~YavY~vllk~~~----~~eg~rvdi~lffGfvGL-fnllllwP~l~iL~~~~~e~F~lP~~~q~~~vv~~~ligt 328 (416)
T KOG2765|consen 254 LSALLYAVYTVLLKRKI----GDEGERVDIQLFFGFVGL-FNLLLLWPPLIILDFFGEERFELPSSTQFSLVVFNNLIGT 328 (416)
T ss_pred HHHHHHHHHHHHHHhhc----ccccccccHHHHHHHHHH-HHHHHHhHHHHHHHHhccCcccCCCCceeEeeeHhhHHHH
Confidence 33445555555444432 445678888888776643 344444322 111 121 1 1222233334444544 4
Q ss_pred HHHHHHhHHhhhcCchhHHHHHhhhchHHHHHHHHHHhccccCchhhHHHHHHHHhhHHhhcc
Q 018496 98 ILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILF 160 (355)
Q Consensus 98 ~~~~~~~~~sl~~ls~~~~~i~ks~~pi~v~i~~~l~~~~k~s~~~~ls~~li~~Gv~l~~~~ 160 (355)
+.+.+++-.|.-..+.-+.++..+..+...|+...++.++++++..+++.+.+++|-+++...
T Consensus 329 vvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~ 391 (416)
T KOG2765|consen 329 VVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNIS 391 (416)
T ss_pred HHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecc
Confidence 677788888888877666776666665566778888889999999999999999999887654
No 97
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=93.09 E-value=0.039 Score=49.28 Aligned_cols=132 Identities=14% Similarity=0.043 Sum_probs=80.6
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHccCCCChhhHHHHhhHHHHHHHHHHHHHhCchHHHHHHhhhChHHHHHHHHHHHHHH
Q 018496 179 GVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVAT 258 (355)
Q Consensus 179 G~~~~~~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~ll~~~~~~~ 258 (355)
+++++++-++.||....... +.+-.|.+...-+.+-+.++.+...++..+. .++..+..-+..+..=.
T Consensus 3 ~~liaL~P~l~WGsip~v~~----k~GG~p~qQ~lGtT~GALifaiiv~~~~~p~--------~T~~~~iv~~isG~~Ws 70 (288)
T COG4975 3 DLLIALLPALGWGSIPLVAN----KFGGKPYQQTLGTTLGALIFAIIVFLFVSPE--------LTLTIFIVGFISGAFWS 70 (288)
T ss_pred hHHHHHHHHHHhcccceeee----ecCCChhHhhhhccHHHHHHHHHHheeecCc--------cchhhHHHHHHhhhHhh
Confidence 35566666777777554432 3355677777766665555554443322111 11122222222233336
Q ss_pred HHHHHHHHHHhhhChHHHHHHHHH-HHHHHHHHHHHHcCCCCchhhh-hh---hhHhhhhHHhhhhhcc
Q 018496 259 TSQFFISYTIRTFGALTFATIMTT-RQLVSIVLSCVWFRHPLSWEQC-IG---SIIVFGALYTRSFFKK 322 (355)
Q Consensus 259 ~~~~~~~~~i~~~~~~~~si~~~~-~~v~siils~~~fge~~t~~~~-iG---~~lv~~Gi~~~~~~k~ 322 (355)
+||...+.+++..|...+..+++- +-+-+.+++++.|||--+..+. +| .++++.|+++..+.++
T Consensus 71 ~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~ 139 (288)
T COG4975 71 FGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDR 139 (288)
T ss_pred hhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecc
Confidence 688888889888888887777664 6677889999999997776663 33 3445678888776654
No 98
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=91.70 E-value=3.6 Score=38.20 Aligned_cols=126 Identities=12% Similarity=0.102 Sum_probs=88.1
Q ss_pred hhHHHHHHHHcc-CC------CChhhHHHHhhHHHHHHHHHHHHHhCchHHHHHHhhhChHHHHHHHHHHHHHHHHHHHH
Q 018496 192 FTSTFQDKLFKG-YD------MEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFI 264 (355)
Q Consensus 192 ~~~v~~~~~~~~-~~------~~~~~~~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~ 264 (355)
.++++||++..+ |+ -++.-+.+-..+.+.+.....+- +. .-...+...|+...+.++.+.++..+-
T Consensus 28 ~~gVlQEki~T~~y~~~~~rF~~~~fL~~~q~l~~~~~s~~~l~--~~-----k~~~~~~apl~~y~~is~tn~~s~~~~ 100 (327)
T KOG1581|consen 28 TWGVLQEKIMTRPYGEDGERFEHSLFLVFCQRLVALLVSYAMLK--WW-----KKELSGVAPLYKYSLISFTNTLSSWCG 100 (327)
T ss_pred HHHHHhcceeecccCcccccccccHHHHHHHHHHHHHHHHHHHh--cc-----cccCCCCCchhHHhHHHHHhhcchHHH
Confidence 357889998764 42 12333444444444444422211 10 001123344555556677788888888
Q ss_pred HHHHhhhChHHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhhhhHhhhhHHhhhhhcccc
Q 018496 265 SYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVS 324 (355)
Q Consensus 265 ~~~i~~~~~~~~si~~~~~~v~siils~~~fge~~t~~~~iG~~lv~~Gi~~~~~~k~k~ 324 (355)
+-++|+.+=-+..+.-..|-+-..+.+.++.+.+.++...+-..+|-+|+......++.+
T Consensus 101 yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~ 160 (327)
T KOG1581|consen 101 YEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSD 160 (327)
T ss_pred HHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCC
Confidence 999999999999999999999999999999999999999998888888887777775544
No 99
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=89.69 E-value=2 Score=39.24 Aligned_cols=135 Identities=19% Similarity=0.247 Sum_probs=73.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCceeehHHHHHHHHHHHHHHHHHHHHhhcCCCC-----CCCchhHH-
Q 018496 17 LKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAID-----PVAPVYKY- 90 (355)
Q Consensus 17 ~~~~~~~~g~~~~~~~~~~~~e~i~~~~~~~~~~~f~~p~~l~~~~~~~~~l~~~~~~~~~~~~~~-----~~~~~~~~- 90 (355)
+.....+.|.-.+=+..|=+||++++..-+++.+. +++-..++.+..+..+...++-.+ .+.|++.|
T Consensus 189 ~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~Em-------vfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyG 261 (367)
T KOG1582|consen 189 LIGVMMISGALLADAVIGNVQEKAMKMNPASSSEM-------VFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYG 261 (367)
T ss_pred eeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceE-------EEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHH
Confidence 34567778888888889999999998643322221 112222222222222222221110 12345443
Q ss_pred --HHHHHHHHHHH--HHhHHhhhcCchhHHHHHhhhchHHHHHHHHHHhccccCchhhHHHHHHHHhhHHhhcc
Q 018496 91 --CLVSMSNILTT--TCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILF 160 (355)
Q Consensus 91 --~~~~~~~~~~~--~~~~~sl~~ls~~~~~i~ks~~pi~v~i~~~l~~~~k~s~~~~ls~~li~~Gv~l~~~~ 160 (355)
+..+.....+. ++....+- ..+++.......=-.+.+++++++.|+++..-.-+.++++.|+.+=.+.
T Consensus 262 y~~~~s~~gylG~~~VLalI~~f--GA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ys 333 (367)
T KOG1582|consen 262 YAFLFSLAGYLGIVFVLALIKLF--GALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYS 333 (367)
T ss_pred HHHHHHHHhHhhHHHHHHHHHHh--chhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhccc
Confidence 22333322222 22222222 2223322233334567788999999999999999999999999986655
No 100
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=88.95 E-value=4.2 Score=33.89 Aligned_cols=101 Identities=12% Similarity=0.089 Sum_probs=56.5
Q ss_pred ehHHHHHHHHHHHHHHHHHHHHhhcCCC----CCCCchhHHH--HHHHHHHHHHHHhHHhhhcCchh-HHHHHhhhchHH
Q 018496 54 YSLFLVFCNRLMTSAVSAGTLIASRKAI----DPVAPVYKYC--LVSMSNILTTTCQYEALKYVSFP-VQTLAKCAKMIP 126 (355)
Q Consensus 54 ~p~~l~~~~~~~~~l~~~~~~~~~~~~~----~~~~~~~~~~--~~~~~~~~~~~~~~~sl~~ls~~-~~~i~ks~~pi~ 126 (355)
.|..-.+....++.++...+...+.++. .++.|||.++ .+|..+...+ -.....+... +..+.-+...+.
T Consensus 33 spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~GG~lGa~~vt~s---~~l~p~lGa~~t~~l~i~gQli~ 109 (150)
T COG3238 33 SPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWIGGLLGAIFVTSS---ILLAPRLGAATTIALVIAGQLIM 109 (150)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHHccchhhhhhhhh---HHhccchhHHHHHHHHHHHHHHH
Confidence 4777777777887777655544432211 1345787776 3333333332 2233334332 223333334444
Q ss_pred HHHHHHH----HhccccCchhhHHHHHHHHhhHHh
Q 018496 127 VMIWGTL----IMQKRYKGYDYFLALLVTLGCSIF 157 (355)
Q Consensus 127 v~i~~~l----~~~~k~s~~~~ls~~li~~Gv~l~ 157 (355)
-+++..+ .-++++++.++++++++.+|+.++
T Consensus 110 glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~ 144 (150)
T COG3238 110 GLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLA 144 (150)
T ss_pred HHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHh
Confidence 4444332 135899999999999999996554
No 101
>PHA03049 IMV membrane protein; Provisional
Probab=88.24 E-value=0.46 Score=33.22 Aligned_cols=41 Identities=20% Similarity=0.196 Sum_probs=25.6
Q ss_pred hhhhhhHhhhhHHh-hhhhccccCC-CCCCCCCCccccccccc
Q 018496 303 QCIGSIIVFGALYT-RSFFKKVSEK-PRPSEHPMENMHNGASS 343 (355)
Q Consensus 303 ~~iG~~lv~~Gi~~-~~~~k~k~~~-~~~~~~~~~~~~~~~~~ 343 (355)
-.+++++++.|+.+ ..|.|++..+ .+|+.+..|++||-+.+
T Consensus 6 ~l~iICVaIi~lIvYgiYnkk~~~q~~~p~~e~ye~~e~~kT~ 48 (68)
T PHA03049 6 ILVIICVVIIGLIVYGIYNKKTTTSQNPPSQEKYEKMEDLKTG 48 (68)
T ss_pred HHHHHHHHHHHHHHHHHHhcccccCCCCCChhhccCchhhhhh
Confidence 35677787777544 4555555544 44566778888886543
No 102
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=86.10 E-value=0.72 Score=39.99 Aligned_cols=63 Identities=8% Similarity=0.227 Sum_probs=55.6
Q ss_pred HHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhhhhHhhhhHHhhhhhcc
Q 018496 260 SQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKK 322 (355)
Q Consensus 260 ~~~~~~~~i~~~~~~~~si~~~~~~v~siils~~~fge~~t~~~~iG~~lv~~Gi~~~~~~k~ 322 (355)
.++.+..++++.+|+.++.+....+.+.-+++++++||.+....++...+.++|++...|..+
T Consensus 66 aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN 128 (290)
T KOG4314|consen 66 ANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADN 128 (290)
T ss_pred CCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccc
Confidence 445666789999999999999999999999999999999999999999999999877766544
No 103
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=85.36 E-value=1.8 Score=39.56 Aligned_cols=69 Identities=17% Similarity=0.233 Sum_probs=43.9
Q ss_pred HHHHHHHHHHH-HHhHHhhhcCchhH-------HHHHhhhchHHHHHHHHHHhccccCchhhHHHHHHHHhhHHhhc
Q 018496 91 CLVSMSNILTT-TCQYEALKYVSFPV-------QTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFIL 159 (355)
Q Consensus 91 ~~~~~~~~~~~-~~~~~sl~~ls~~~-------~~i~ks~~pi~v~i~~~l~~~~k~s~~~~ls~~li~~Gv~l~~~ 159 (355)
+|....+.+.+ ..++.+.+++..=+ .++.-...=...++++.+.++..+++..|++..++++|..+++.
T Consensus 238 vP~~~~yLl~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~ 314 (330)
T KOG1583|consen 238 VPSMWVYLLFNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFAN 314 (330)
T ss_pred ccHHHHHHHHHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 44444554333 56666776643210 01111112234567788889999999999999999999999874
No 104
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=84.91 E-value=1.2 Score=39.79 Aligned_cols=73 Identities=8% Similarity=0.166 Sum_probs=54.2
Q ss_pred chhHHHHHHHHHHHHHHHhHHhhhcCchhHHHHHhhhchHHHHHHHHHHhccccCchhhHHHHHHHHhhHHhh
Q 018496 86 PVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFI 158 (355)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~sl~~ls~~~~~i~ks~~pi~v~i~~~l~~~~k~s~~~~ls~~li~~Gv~l~~ 158 (355)
.++++..++++.+++.++-+.-..+-+.-+-.+...+.-.|+.+.+.++++...+.+||++..+++.|...=.
T Consensus 240 ~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~ 312 (337)
T KOG1580|consen 240 VFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADV 312 (337)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHh
Confidence 3566677788888887777766666443233333445567888999999999999999999999999876544
No 105
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=81.92 E-value=0.52 Score=43.88 Aligned_cols=118 Identities=13% Similarity=0.114 Sum_probs=77.7
Q ss_pred CchHHHHHHHHHHHHHHHhhHHHHHHHHccCCCChhhHHHHhhHHHHHHHHHHHHHhCchHHHHHHhhhChHHHHHHHHH
Q 018496 174 ENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALL 253 (355)
Q Consensus 174 ~~~~~G~~~~~~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~ll~~ 253 (355)
.++..|..++..+.++-|...+.+|+-.+|.+....+ .-+|+ ..+. .++ .||.-++.
T Consensus 17 ~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~~~~r-----------------a~~gg----~~yl-~~~-~Ww~G~lt 73 (335)
T KOG2922|consen 17 SDNIIGLVLAISSSIFIGSSFILKKKGLKRAGASGLR-----------------AGEGG----YGYL-KEP-LWWAGMLT 73 (335)
T ss_pred cCceeeeeehhhccEEEeeehhhhHHHHHHHhhhccc-----------------ccCCC----cchh-hhH-HHHHHHHH
Confidence 5678899999888888888777777765542210000 00111 0111 122 34332221
Q ss_pred HHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhhhhHhhhhHHhh
Q 018496 254 STVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTR 317 (355)
Q Consensus 254 ~~~~~~~~~~~~~~i~~~~~~~~si~~~~~~v~siils~~~fge~~t~~~~iG~~lv~~Gi~~~ 317 (355)
-.+|...-|.+....++...+..+.+.-+.+.+++.++++|.+++...+|.++.+.|-...
T Consensus 74 ---m~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~i 134 (335)
T KOG2922|consen 74 ---MIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTI 134 (335)
T ss_pred ---HHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEE
Confidence 1345555556666677888888889999999999999999999999999999988774433
No 106
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=81.40 E-value=3.4 Score=37.97 Aligned_cols=66 Identities=11% Similarity=0.113 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhhhhHhhhhHHhhhh
Q 018496 254 STVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSF 319 (355)
Q Consensus 254 ~~~~~~~~~~~~~~i~~~~~~~~si~~~~~~v~siils~~~fge~~t~~~~iG~~lv~~Gi~~~~~ 319 (355)
++|-..|....|-.+-.+++....+.--.-.+|+-++|..+++++++..||+|+..+..|+.....
T Consensus 93 al~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~ 158 (372)
T KOG3912|consen 93 ALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGS 158 (372)
T ss_pred HHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeee
Confidence 344445555666677777777777777777889999999999999999999999999999766544
No 107
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=79.12 E-value=1 Score=40.77 Aligned_cols=74 Identities=14% Similarity=0.161 Sum_probs=59.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhhhhHhhhhHHhhhhh
Q 018496 247 FFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFF 320 (355)
Q Consensus 247 ~~~ll~~~~~~~~~~~~~~~~i~~~~~~~~si~~~~~~v~siils~~~fge~~t~~~~iG~~lv~~Gi~~~~~~ 320 (355)
|...+++++.-.=+++++..+.++++-+.......-..+...+++|++++..-.+.++.|.++.++|+......
T Consensus 78 ~~hYilla~~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~s 151 (336)
T KOG2766|consen 78 WRHYILLAFVDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFS 151 (336)
T ss_pred HHHhhheeEEeecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEe
Confidence 44444555555556777777888888888888888899999999999999999999999999999997665443
No 108
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=73.70 E-value=85 Score=29.90 Aligned_cols=230 Identities=10% Similarity=-0.044 Sum_probs=111.4
Q ss_pred hhHHHHHHHHHHHHHHHhHHhhhcCchh--HHHHHhhhchHHHHHHHHHH-------hccccCchhhHHHHHHHHhhHHh
Q 018496 87 VYKYCLVSMSNILTTTCQYEALKYVSFP--VQTLAKCAKMIPVMIWGTLI-------MQKRYKGYDYFLALLVTLGCSIF 157 (355)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~sl~~ls~~--~~~i~ks~~pi~v~i~~~l~-------~~~k~s~~~~ls~~li~~Gv~l~ 157 (355)
+...+..|++...+....=.+.+|+..+ ..+.+-.|..+=+++ -.++ +..+-.....++++++++|+++.
T Consensus 73 l~~~~l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTli-ppi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~ 151 (344)
T PF06379_consen 73 LFWTFLFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLI-PPIFQGTFDELLATPSGQIVLLGVAVCLIGIAIC 151 (344)
T ss_pred HHHHHHHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhch-HHHHcCcccccccCCCchhhhhHHHHHHHHHHHH
Confidence 3334456666666666666888886544 333333332222221 1222 22333456789999999999988
Q ss_pred hccCCCCCCCCC-CCCCCchHHHHHHHHHHHHHHHhhHHHHHHHH------ccCCCChhhHH----HHhhHHHHHHHHHH
Q 018496 158 ILFPSGADLSPY-SKGRENTVWGVSLMVGYLGFDGFTSTFQDKLF------KGYDMEIHNQI----FYTTLCSCVLSLSG 226 (355)
Q Consensus 158 ~~~~~~~~~~~~-~~~~~~~~~G~~~~~~s~~~~a~~~v~~~~~~------~~~~~~~~~~~----~~~~~~~~i~~~~~ 226 (355)
.......|.+.. ..++.+--.|+++++++-++++..+.-.+.-. .+++.+|.... .....-+.+..+.+
T Consensus 152 g~AG~~Ke~~~~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ag~pi~~~a~a~G~~~l~~~l~~~vvv~~GGf~tN~~y 231 (344)
T PF06379_consen 152 GKAGSMKEKELGEEAKEFNFKKGLIIAVLSGVMSACFNFGLDAGKPIHEAAVAAGVNPLYANLPVYVVVLWGGFITNLIY 231 (344)
T ss_pred hHHHHhhhhhhccchhhhhhhhhHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHcCCCcHHHhCchhhhhhhhHHHHHHHH
Confidence 654221121111 11122345799999999888888765433210 11233331110 01111122333344
Q ss_pred HHHh----CchHHHHHHhhhChHHHHHHHHHHHHHHH--HHHHHHH-HHh----hhChHHHHHHHHHHHHHHHHHHHHHc
Q 018496 227 LILE----GHLFLAIDFVYHHLDCFFDVALLSTVATT--SQFFISY-TIR----TFGALTFATIMTTRQLVSIVLSCVWF 295 (355)
Q Consensus 227 ~~~~----g~~~~~~~~~~~~~~~~~~ll~~~~~~~~--~~~~~~~-~i~----~~~~~~~si~~~~~~v~siils~~~f 295 (355)
+++. ......-++....|......+...+.+.+ .|++.|. .=. ..+..--.+.+.+-.+++-+.+++ +
T Consensus 232 c~~~l~~~k~~s~~~d~~~~~~~~~~N~~~~aLaG~lWy~qfffYg~G~s~lg~~~~~~sW~i~ma~~vl~snvwGl~-l 310 (344)
T PF06379_consen 232 CLILLAKNKNWSWKGDYSVAKPPLLKNYLFCALAGVLWYSQFFFYGMGESKLGASGPFSSWAIHMALIVLFSNVWGLI-L 310 (344)
T ss_pred HHHHHhhcCCCccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccHHHHHHHHHHHHHHHHHHHH-H
Confidence 3321 01000001111122223333333344443 3433332 222 344566777788888888888875 4
Q ss_pred CC------CCchhhhhhhhHhhhhHHhhh
Q 018496 296 RH------PLSWEQCIGSIIVFGALYTRS 318 (355)
Q Consensus 296 ge------~~t~~~~iG~~lv~~Gi~~~~ 318 (355)
+| +.-..-++|+++++.++.+.-
T Consensus 311 kEWKg~s~kt~~vl~~G~~vlI~s~~ivG 339 (344)
T PF06379_consen 311 KEWKGASKKTIRVLVLGIAVLILSVVIVG 339 (344)
T ss_pred HHhccCCcccHHHHHHHHHHHHHHHHHHh
Confidence 54 222344788888777665543
No 109
>PF05961 Chordopox_A13L: Chordopoxvirus A13L protein; InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=72.46 E-value=4.4 Score=28.57 Aligned_cols=39 Identities=18% Similarity=0.157 Sum_probs=21.0
Q ss_pred hhhhhhHhhhh-HHhhhhhccccCC-CCCCCCCCccccccc
Q 018496 303 QCIGSIIVFGA-LYTRSFFKKVSEK-PRPSEHPMENMHNGA 341 (355)
Q Consensus 303 ~~iG~~lv~~G-i~~~~~~k~k~~~-~~~~~~~~~~~~~~~ 341 (355)
-.+++++++.| +.|..|.|++..+ .+|+.|.-|..++-+
T Consensus 6 iLi~ICVaii~lIlY~iYnr~~~~q~~~~~~e~y~~~~~~k 46 (68)
T PF05961_consen 6 ILIIICVAIIGLILYGIYNRKKTTQNTNPSTENYEKMENLK 46 (68)
T ss_pred HHHHHHHHHHHHHHHHHHhcccccCCCCCchhhcCCccccc
Confidence 35778887755 5555566655543 444434444444443
No 110
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=70.32 E-value=8.5 Score=34.24 Aligned_cols=71 Identities=13% Similarity=0.213 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHHHHhHHhhhcCchhHHHHHhhhchHHHHHHHHHHhccccCchhhHHHHHHHHhhHHhhcc
Q 018496 90 YCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILF 160 (355)
Q Consensus 90 ~~~~~~~~~~~~~~~~~sl~~ls~~~~~i~ks~~pi~v~i~~~l~~~~k~s~~~~ls~~li~~Gv~l~~~~ 160 (355)
.++-|++.++..+++-+.++-+|.+++.+.-+..-.|..+.+.++++++.+..++.++++.+...++.+..
T Consensus 227 m~ISgl~svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYava 297 (309)
T COG5070 227 MFISGLCSVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVA 297 (309)
T ss_pred HHHHHHHHhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHH
Confidence 45566777777788888888888888888888888888888888999999999999988888777776654
No 111
>PRK06638 NADH:ubiquinone oxidoreductase subunit J; Provisional
Probab=70.15 E-value=75 Score=27.77 Aligned_cols=23 Identities=9% Similarity=0.099 Sum_probs=17.1
Q ss_pred HHHHHHcCCCCchhhhhhhhHhh
Q 018496 289 VLSCVWFRHPLSWEQCIGSIIVF 311 (355)
Q Consensus 289 ils~~~fge~~t~~~~iG~~lv~ 311 (355)
.+|..+|++..=+...+|..+..
T Consensus 134 ~iG~~L~t~y~l~fe~~silLLv 156 (198)
T PRK06638 134 AIGILLFTDYLLPFELASVLLLV 156 (198)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34667778877788888888854
No 112
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=68.37 E-value=1.1e+02 Score=28.86 Aligned_cols=131 Identities=11% Similarity=0.069 Sum_probs=76.8
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHccCCCCh-hhHHHHhhHHHHHHHHHHHHHhCchHHHHHHhhhChHHHHHHHHHHHHHH
Q 018496 180 VSLMVGYLGFDGFTSTFQDKLFKGYDMEI-HNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVAT 258 (355)
Q Consensus 180 ~~~~~~s~~~~a~~~v~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~ll~~~~~~~ 258 (355)
...++..++++.+..+..|..+..|+.+. .-++.+.++.+++.....- ..|-. +...+..+.+..|..+ .+.-.
T Consensus 14 l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk-~~~lv-~~~~l~~~~~kk~~P~---~~lf~ 88 (314)
T KOG1444|consen 14 LLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLK-RLGLV-NFRPLDLRTAKKWFPV---SLLFV 88 (314)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHH-Hhcee-ecCCcChHHHHHHccH---HHHHH
Confidence 44445555566666677787888776543 4444566666554432221 11100 0000111222333322 11111
Q ss_pred HHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhhhhHhhhhHH
Q 018496 259 TSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALY 315 (355)
Q Consensus 259 ~~~~~~~~~i~~~~~~~~si~~~~~~v~siils~~~fge~~t~~~~iG~~lv~~Gi~ 315 (355)
...+.-...+++.+--..++.-...++++.+...++||..++..-|.....+++|..
T Consensus 89 ~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~ 145 (314)
T KOG1444|consen 89 GMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSV 145 (314)
T ss_pred HHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHH
Confidence 111233346888888888888899999999999999999999999999888877643
No 113
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=66.58 E-value=9.1 Score=29.73 Aligned_cols=70 Identities=13% Similarity=0.221 Sum_probs=49.1
Q ss_pred hHHHHHHHHHHHHHHHhHHhhhcCchhHHH-HHhhhchHHHHHHHHHHhccccCchhhHHHHHHHHhhHHh
Q 018496 88 YKYCLVSMSNILTTTCQYEALKYVSFPVQT-LAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIF 157 (355)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~sl~~ls~~~~~-i~ks~~pi~v~i~~~l~~~~k~s~~~~ls~~li~~Gv~l~ 157 (355)
++|.+.-..+-.++.+.+.-+...+.+.++ +..++...++.+.+..+..|....+.+++..++++|+.+.
T Consensus 53 w~Y~iPFllNqcgSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lc 123 (125)
T KOG4831|consen 53 WEYLIPFLLNQCGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLC 123 (125)
T ss_pred HHHHHHHHHHHhhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhe
Confidence 456655556666677777888876654332 2355677888999987666666677789999999998764
No 114
>PRK02237 hypothetical protein; Provisional
Probab=62.60 E-value=13 Score=29.10 Aligned_cols=33 Identities=15% Similarity=0.378 Sum_probs=29.3
Q ss_pred HHHHHHHhccccCchhhHHHHHHHHhhHHhhcc
Q 018496 128 MIWGTLIMQKRYKGYDYFLALLVTLGCSIFILF 160 (355)
Q Consensus 128 ~i~~~l~~~~k~s~~~~ls~~li~~Gv~l~~~~ 160 (355)
++..+.+-++|+++.++++..++.+|+.++.+.
T Consensus 74 l~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~ 106 (109)
T PRK02237 74 LLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYA 106 (109)
T ss_pred HHHHHHhcCcCCChhHHHhHHHHHHhHHHheec
Confidence 467788899999999999999999999988665
No 115
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=62.04 E-value=7.6 Score=30.12 Aligned_cols=29 Identities=24% Similarity=0.574 Sum_probs=24.9
Q ss_pred HHHHHHHcCCCCchhhhhhhhHhhhhHHh
Q 018496 288 IVLSCVWFRHPLSWEQCIGSIIVFGALYT 316 (355)
Q Consensus 288 iils~~~fge~~t~~~~iG~~lv~~Gi~~ 316 (355)
..++++++||++++.+..|.++++++++.
T Consensus 77 ~~Fsv~~l~E~l~~n~l~af~~i~~av~f 105 (108)
T PF04342_consen 77 APFSVFYLGEPLKWNYLWAFLCILGAVYF 105 (108)
T ss_pred HHHHHHHhCCCccHHHHHHHHHHHHhhhe
Confidence 45678899999999999999999888654
No 116
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=61.44 E-value=1.3e+02 Score=27.45 Aligned_cols=98 Identities=12% Similarity=0.054 Sum_probs=62.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHH-HHHHHHHHHHhHHhhhcCchhHHHHHhhhchHHHHHHHHH
Q 018496 55 SLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLV-SMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTL 133 (355)
Q Consensus 55 p~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~sl~~ls~~~~~i~ks~~pi~v~i~~~l 133 (355)
+++..+.++....+.+++....+.. + ++..+..+ |.+.+.++.+..-..+.+..+...++-++. .++.+|.
T Consensus 27 g~~fQw~~~~~i~~~g~~v~~~~~~--p---~f~p~amlgG~lW~~gN~~~vpii~~iGLglg~liW~s~---n~l~Gw~ 98 (254)
T PF07857_consen 27 GFFFQWVMCSGIFLVGLVVNLILGF--P---PFYPWAMLGGALWATGNILVVPIIKTIGLGLGMLIWGSV---NCLTGWA 98 (254)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhcCC--C---cceeHHHhhhhhhhcCceeehhHhhhhhhHHHHHHHHHH---HHHHHHH
Confidence 5566677777666666655554432 2 23333434 467788888888888888888777766642 2334444
Q ss_pred H-----hcc-----ccCchhhHHHHHHHHhhHHhhcc
Q 018496 134 I-----MQK-----RYKGYDYFLALLVTLGCSIFILF 160 (355)
Q Consensus 134 ~-----~~~-----k~s~~~~ls~~li~~Gv~l~~~~ 160 (355)
. ++. +.++..++++.++++|..++..-
T Consensus 99 ~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fi 135 (254)
T PF07857_consen 99 SGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFI 135 (254)
T ss_pred HhhceeccccccccchhHHHHHHHHHHHHHHHheeee
Confidence 2 321 23456688999999998888653
No 117
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=60.87 E-value=12 Score=29.22 Aligned_cols=34 Identities=24% Similarity=0.526 Sum_probs=29.9
Q ss_pred HHHHHHHHhccccCchhhHHHHHHHHhhHHhhcc
Q 018496 127 VMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILF 160 (355)
Q Consensus 127 v~i~~~l~~~~k~s~~~~ls~~li~~Gv~l~~~~ 160 (355)
.++.++.+-++|+.+.++++..++.+|+.++.+.
T Consensus 71 Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 71 SLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred HHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 3567888899999999999999999999998765
No 118
>PF04341 DUF485: Protein of unknown function, DUF485; InterPro: IPR007436 This family includes several putative integral membrane proteins.
Probab=60.47 E-value=49 Score=24.92 Aligned_cols=61 Identities=7% Similarity=0.046 Sum_probs=45.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCceeehHHHHHHHHHHHHHHHHHHHHhhcC
Q 018496 17 LKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRK 79 (355)
Q Consensus 17 ~~~~~~~~g~~~~~~~~~~~~e~i~~~~~~~~~~~f~~p~~l~~~~~~~~~l~~~~~~~~~~~ 79 (355)
+.+...+.+.|.+|.....+....+..+.. +| ..+..+.+...|..+++++++.+...-++
T Consensus 19 ~~l~~i~l~~y~~~~ll~a~~p~~m~~~v~-~G-~~t~g~~~g~~~~~~~~~l~~~Yv~~An~ 79 (91)
T PF04341_consen 19 WPLSAIFLVLYFGFVLLSAFAPELMATPVF-PG-SLTLGIVLGLGQIVFAWVLTWLYVRRANR 79 (91)
T ss_pred HHHHHHHHHHHHHHHHHHHHCHHHHcCccc-CC-CcCHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 355677788888888888888666665432 23 67788888889999999999888765543
No 119
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=52.07 E-value=15 Score=28.03 Aligned_cols=30 Identities=23% Similarity=0.652 Sum_probs=26.0
Q ss_pred HHHHHHHcCCCCchhhhhhhhHhhhhHHhh
Q 018496 288 IVLSCVWFRHPLSWEQCIGSIIVFGALYTR 317 (355)
Q Consensus 288 iils~~~fge~~t~~~~iG~~lv~~Gi~~~ 317 (355)
+.+|++.++||+.+.++.|..++.+|+++.
T Consensus 84 v~Fsvfyl~epl~~~~l~a~~~i~gav~fi 113 (116)
T COG3169 84 VPFSVFYLKEPLRWNYLWAFLLILGAVYFI 113 (116)
T ss_pred HHHHHHHHcCcchHHHHHHHHHHHHHHHHh
Confidence 457889999999999999999999987653
No 120
>PF08507 COPI_assoc: COPI associated protein; InterPro: IPR013714 Proteins in this family co-localise with COPI vesicle coat proteins []. In yeast it is a Golgi membrane protein involved in vesicular trafficking, interacting with TVP18 [].
Probab=51.95 E-value=1.3e+02 Score=24.42 Aligned_cols=36 Identities=17% Similarity=0.157 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHcCCCCchhhhhhhhHhhhhHHhhh
Q 018496 282 TRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRS 318 (355)
Q Consensus 282 ~~~v~siils~~~fge~~t~~~~iG~~lv~~Gi~~~~ 318 (355)
-|-++-+.+|.+.+++ -.....+|..+...|+.+..
T Consensus 69 GRGlfyif~G~l~~~~-~~~~~i~g~~~~~~G~~~i~ 104 (136)
T PF08507_consen 69 GRGLFYIFLGTLCLGQ-SILSIIIGLLLFLVGVIYII 104 (136)
T ss_pred HHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHHHHH
Confidence 3566666777777777 22333556666666765443
No 121
>PRK13108 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=51.39 E-value=1.7e+02 Score=29.22 Aligned_cols=22 Identities=9% Similarity=0.167 Sum_probs=18.2
Q ss_pred CchhhhhhhhHhhhhHHhhhhh
Q 018496 299 LSWEQCIGSIIVFGALYTRSFF 320 (355)
Q Consensus 299 ~t~~~~iG~~lv~~Gi~~~~~~ 320 (355)
++..||+++.++++|+++..+.
T Consensus 254 l~~~Q~lSl~~il~gl~~~~~~ 275 (460)
T PRK13108 254 IRINSFTSTFVFIGAVVYIILA 275 (460)
T ss_pred ccHHHHHHHHHHHHHHHHHHHh
Confidence 7899999999999997666554
No 122
>PRK02237 hypothetical protein; Provisional
Probab=51.27 E-value=33 Score=26.81 Aligned_cols=45 Identities=13% Similarity=-0.025 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCchhhhhhhhHhhhhHHhhhhh
Q 018496 276 FATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFF 320 (355)
Q Consensus 276 ~si~~~~~~v~siils~~~fge~~t~~~~iG~~lv~~Gi~~~~~~ 320 (355)
.+..+-.-.+.+++..+.+-|++++...++|.++++.|..+..+.
T Consensus 62 YAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~ 106 (109)
T PRK02237 62 YAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYA 106 (109)
T ss_pred HHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheec
Confidence 455566667889999999999999999999999999887665444
No 123
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=50.78 E-value=1e+02 Score=23.99 Aligned_cols=33 Identities=18% Similarity=0.352 Sum_probs=28.8
Q ss_pred HHHHHHHhccccCchhhHHHHHHHHhhHHhhcc
Q 018496 128 MIWGTLIMQKRYKGYDYFLALLVTLGCSIFILF 160 (355)
Q Consensus 128 ~i~~~l~~~~k~s~~~~ls~~li~~Gv~l~~~~ 160 (355)
++..+++-|+++.+.++.+..++.+|+.++.+.
T Consensus 73 L~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~ 105 (109)
T COG1742 73 LAWLWVVDGVRPDRYDWIGAAICLAGVAVILFG 105 (109)
T ss_pred HHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeC
Confidence 456777889999999999999999999887765
No 124
>PF11346 DUF3149: Protein of unknown function (DUF3149); InterPro: IPR021494 This bacterial family of proteins has no known function.
Probab=49.82 E-value=12 Score=24.02 Aligned_cols=30 Identities=13% Similarity=0.291 Sum_probs=22.8
Q ss_pred cCCCCchhhhhhhhHhhh-hHHhhhhhcccc
Q 018496 295 FRHPLSWEQCIGSIIVFG-ALYTRSFFKKVS 324 (355)
Q Consensus 295 fge~~t~~~~iG~~lv~~-Gi~~~~~~k~k~ 324 (355)
|+++..+.+.+.++.+++ +.++..+..+|-
T Consensus 7 F~s~vGL~Sl~vI~~~igm~~~~~~~F~~k~ 37 (42)
T PF11346_consen 7 FGSDVGLMSLIVIVFTIGMGVFFIRYFIRKM 37 (42)
T ss_pred hcChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999988774 667666655543
No 125
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=49.57 E-value=31 Score=26.90 Aligned_cols=45 Identities=13% Similarity=0.013 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCchhhhhhhhHhhhhHHhhhhh
Q 018496 276 FATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFF 320 (355)
Q Consensus 276 ~si~~~~~~v~siils~~~fge~~t~~~~iG~~lv~~Gi~~~~~~ 320 (355)
.+..+-.-.+.+++.++.+-|++++...++|..+++.|..+..+.
T Consensus 60 YAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 60 YAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred HHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 445555566889999999999999999999999999887665554
No 126
>PF04971 Lysis_S: Lysis protein S ; InterPro: IPR007054 The lysis S protein is a cytotoxic protein forming holes in membranes causing cell lysis. The action of Lysis S is independent of the proportion of acidic phospholipids in the membrane [].
Probab=45.88 E-value=11 Score=26.82 Aligned_cols=20 Identities=15% Similarity=0.248 Sum_probs=12.0
Q ss_pred hhhhHHhhhhhccccCCCCC
Q 018496 310 VFGALYTRSFFKKVSEKPRP 329 (355)
Q Consensus 310 v~~Gi~~~~~~k~k~~~~~~ 329 (355)
.+.+...+.|.|.|+.+.++
T Consensus 45 ~~lt~ltN~YFK~k~drr~~ 64 (68)
T PF04971_consen 45 GLLTYLTNLYFKIKEDRRKA 64 (68)
T ss_pred HHHHHHhHhhhhhhHhhhHh
Confidence 33455666777877755443
No 127
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=44.15 E-value=7.5 Score=35.67 Aligned_cols=91 Identities=9% Similarity=0.130 Sum_probs=0.0
Q ss_pred HHHHHhhhchHHHH-HHHHHHhccccC-chhhHHHHHHHHhhHHhhccCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHh
Q 018496 115 VQTLAKCAKMIPVM-IWGTLIMQKRYK-GYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGF 192 (355)
Q Consensus 115 ~~~i~ks~~pi~v~-i~~~l~~~~k~s-~~~~ls~~li~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~~~~~s~~~~a~ 192 (355)
..+++.|...+.+. |+-.+++|||.= +--.+|++++++-..+.+... .. ...-..|+++.++.+...=.
T Consensus 51 a~~vl~sfAvvliiIIiIImlF~RrLLCPLGlLCiilimi~lLv~~L~t----Lt-----GQ~LF~Gi~~l~l~~lLaL~ 121 (381)
T PF05297_consen 51 ALTVLYSFAVVLIIIIIIIMLFKRRLLCPLGLLCIILIMIVLLVSMLWT----LT-----GQTLFVGIVILFLCCLLALG 121 (381)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHHHHH----hh-----ccHHHHHHHHHHHHHHHHHH
Confidence 33444444333332 223344565544 444677777766555544331 10 12345676555444333222
Q ss_pred hHHHHHHHHccCCCChhhHHHHh
Q 018496 193 TSTFQDKLFKGYDMEIHNQIFYT 215 (355)
Q Consensus 193 ~~v~~~~~~~~~~~~~~~~~~~~ 215 (355)
.+.+. .++++++.+-++++.+.
T Consensus 122 vW~Ym-~lLr~~GAs~WtiLaFc 143 (381)
T PF05297_consen 122 VWFYM-WLLRELGASFWTILAFC 143 (381)
T ss_dssp -----------------------
T ss_pred HHHHH-HHHHHhhhHHHHHHHHH
Confidence 23332 36778888877777654
No 128
>PF01350 Flavi_NS4A: Flavivirus non-structural protein NS4A; InterPro: IPR000404 Flaviviruses encode a single polyprotein. This is cleaved into three structural and seven non-structural proteins. The NS4A protein is small and poorly conserved among the Flaviviruses. NS4A contains multiple hydrophobic potential membrane spanning regions []. NS4A has only been found in cells infected by Kunjin virus [].; GO: 0016032 viral reproduction, 0016070 RNA metabolic process, 0044423 virion part
Probab=44.02 E-value=1.8e+02 Score=23.99 Aligned_cols=75 Identities=16% Similarity=0.109 Sum_probs=45.8
Q ss_pred hChHHHHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHHcCCCCchhhhhhhhHhhhhHHhhhhh
Q 018496 242 HHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFF 320 (355)
Q Consensus 242 ~~~~~~~~ll~~~~~~~~~~~~~~~~i~~~~~~~~si~~~~~~v~siils~~~fge~~t~~~~iG~~lv~~Gi~~~~~~ 320 (355)
.-|+....++.....+....-.....+++.+...+++-. +.-...+++.+--.+++.++.|..+++.=+.....+
T Consensus 43 elPEAl~till~~ll~~~T~G~~~~lm~~kgi~rm~lG~----~vm~~~~~llw~ggv~~~~IAg~~lv~filmvVLiP 117 (144)
T PF01350_consen 43 ELPEALETILLVVLLGVMTLGVFWFLMRRKGIGRMSLGM----LVMAVAGYLLWMGGVPPGQIAGVLLVFFILMVVLIP 117 (144)
T ss_pred hCcHHHHHHHHHHHHHHHHHHHHHhhhcCCCcchhhHHH----HHHHHHHHHHHhcCCcHHHhHHHHHHHHHHHHhccc
Confidence 346655555444444333333344556666766666544 334455566677788999999999988766655554
No 129
>COG3162 Predicted membrane protein [Function unknown]
Probab=43.76 E-value=1.5e+02 Score=22.83 Aligned_cols=59 Identities=5% Similarity=-0.032 Sum_probs=42.5
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCceeehHHHHHHHHHHHHHHHHHHHHhhc
Q 018496 18 KMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASR 78 (355)
Q Consensus 18 ~~~~~~~g~~~~~~~~~~~~e~i~~~~~~~~~~~f~~p~~l~~~~~~~~~l~~~~~~~~~~ 78 (355)
.+.+.+..+|+.|...--+++..+..+.- ++..+..+-+.+.|+++++++..++..+-+
T Consensus 28 ~ltl~flv~Y~~filLiaf~~~~l~tp~~--~~~Vt~Gip~gvg~fv~tfVlt~IYv~rAn 86 (102)
T COG3162 28 PLTLIFLVVYFGFILLIAFAPGWLATPLF--GASVTRGIPFGVGVFVMTFVLTGIYVRRAN 86 (102)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHhcCccc--CCceehhHhHHHHHHHHHHHHHHHHhhHhh
Confidence 45677888899998888888755444321 235666777788999999999988876544
No 130
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=36.07 E-value=2.1e+02 Score=22.43 Aligned_cols=10 Identities=20% Similarity=0.235 Sum_probs=5.4
Q ss_pred HHHHHHHHHH
Q 018496 285 LVSIVLSCVW 294 (355)
Q Consensus 285 v~siils~~~ 294 (355)
++...++|++
T Consensus 57 lVGa~iG~ll 66 (116)
T COG5336 57 LVGAGIGWLL 66 (116)
T ss_pred HHHHHHHHHH
Confidence 4555566553
No 131
>COG4736 CcoQ Cbb3-type cytochrome oxidase, subunit 3 [Posttranslational modification, protein turnover, chaperones]
Probab=32.75 E-value=24 Score=24.52 Aligned_cols=26 Identities=8% Similarity=-0.045 Sum_probs=14.1
Q ss_pred hHhhhhHHhhhhhccccC-CCCCCCCC
Q 018496 308 IIVFGALYTRSFFKKVSE-KPRPSEHP 333 (355)
Q Consensus 308 ~lv~~Gi~~~~~~k~k~~-~~~~~~~~ 333 (355)
.+++.|+.+..+++.||+ .++++..+
T Consensus 19 ~l~fiavi~~ayr~~~K~~~d~aa~~~ 45 (60)
T COG4736 19 TLFFIAVIYFAYRPGKKGEFDEAARGI 45 (60)
T ss_pred HHHHHHHHHHHhcccchhhHHHHhccC
Confidence 445567677677655553 34444433
No 132
>TIGR02840 spore_YtaF putative sporulation protein YtaF. This protein family was identified, at the time of the publication of the Carboxydothermus hydrogenoformans genome, as having a phylogenetic profile that exactly matches the subset of the Firmicutes capable of forming endospores. The species include Bacillus anthracis, Clostridium tetani, Thermoanaerobacter tengcongensis, Geobacillus kaustophilus, etc. This protein, previously named YtaF, is therefore a putative sporulation protein.
Probab=32.01 E-value=1.1e+02 Score=26.85 Aligned_cols=44 Identities=16% Similarity=0.187 Sum_probs=24.3
Q ss_pred hChHHHHHHHHHHHHHHHHHHHHHcCCCCc-hhhhhhhhHh-hhhH
Q 018496 271 FGALTFATIMTTRQLVSIVLSCVWFRHPLS-WEQCIGSIIV-FGAL 314 (355)
Q Consensus 271 ~~~~~~si~~~~~~v~siils~~~fge~~t-~~~~iG~~lv-~~Gi 314 (355)
..+...+++..+-+..+..++-.+-+--.. +-+|+|..+. +.|+
T Consensus 31 ~~~l~ig~~~~~~~~lg~~~G~~~~~~i~~~~~~~ig~~iLi~iG~ 76 (206)
T TIGR02840 31 LSNLIIAVISGLFIFISMLLGKFLAKFLPPKVTEILGAFILIAIGI 76 (206)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHH
Confidence 344455555555566666666554332223 4678887774 4564
No 133
>PF03348 Serinc: Serine incorporator (Serinc); InterPro: IPR005016 This is a family of proteins which display differential expression in various tumour and cell lines. The function of these proteins is unknown. ; GO: 0016020 membrane
Probab=31.69 E-value=4.8e+02 Score=25.80 Aligned_cols=23 Identities=30% Similarity=0.472 Sum_probs=18.5
Q ss_pred CCchhhhhhhhHhhhhHHhhhhh
Q 018496 298 PLSWEQCIGSIIVFGALYTRSFF 320 (355)
Q Consensus 298 ~~t~~~~iG~~lv~~Gi~~~~~~ 320 (355)
.-++..++|.++.+..+.|..++
T Consensus 282 ~~~~~~iig~i~~~~~v~yss~r 304 (429)
T PF03348_consen 282 WNTWQSIIGLIFTFVSVLYSSFR 304 (429)
T ss_pred cchHHHHHHHHHHHHHHHHhccc
Confidence 56777889999999888887765
No 134
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=31.35 E-value=3.5e+02 Score=23.52 Aligned_cols=15 Identities=27% Similarity=0.401 Sum_probs=7.6
Q ss_pred CCCchhHHHHHHHHH
Q 018496 83 PVAPVYKYCLVSMSN 97 (355)
Q Consensus 83 ~~~~~~~~~~~~~~~ 97 (355)
.+.++++++.+++..
T Consensus 142 ~r~~~~k~~~~~~~~ 156 (206)
T PF06570_consen 142 KRPSWWKYILISVLA 156 (206)
T ss_pred cccHHHHHHHHHHHH
Confidence 344566655554443
No 135
>COG1971 Predicted membrane protein [Function unknown]
Probab=30.54 E-value=74 Score=27.62 Aligned_cols=44 Identities=16% Similarity=0.208 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHHcCCCCchhhhhhhhHh-hhhHHh-hhhhcccc
Q 018496 281 TTRQLVSIVLSCVWFRHPLSWEQCIGSIIV-FGALYT-RSFFKKVS 324 (355)
Q Consensus 281 ~~~~v~siils~~~fge~~t~~~~iG~~lv-~~Gi~~-~~~~k~k~ 324 (355)
..-|.+....+.++=+..-.+-+|+|..+. +.|+.. +.-.|+++
T Consensus 48 ~i~pliG~~~g~~~s~~i~~~~~wigf~lL~~lG~~mI~e~f~~~~ 93 (190)
T COG1971 48 AIMPLIGWFIGKFLSTFIAEWAHWIGFVLLIILGLKMIIEGFKNEE 93 (190)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhh
Confidence 344445555555444444567889988884 467543 33334433
No 136
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=29.52 E-value=39 Score=31.57 Aligned_cols=21 Identities=14% Similarity=-0.280 Sum_probs=15.4
Q ss_pred HHHHHHHHhhHHHHHHHHccC
Q 018496 184 VGYLGFDGFTSTFQDKLFKGY 204 (355)
Q Consensus 184 ~~s~~~~a~~~v~~~~~~~~~ 204 (355)
+++++|+|-+...|+..-++.
T Consensus 2 ~itmlcwGSW~nt~kL~~r~g 22 (336)
T PF07168_consen 2 VITMLCWGSWPNTQKLAERRG 22 (336)
T ss_pred eeehhhhcChHHHHHHHHhcC
Confidence 356789999988887765543
No 137
>PF04277 OAD_gamma: Oxaloacetate decarboxylase, gamma chain ; InterPro: IPR005899 This family comprises distantly related, low complexity, hydrophobic small subunits of several related sodium ion-pumping decarboxylases. These include oxaloacetate decarboxylase gamma subunit and methylmalonyl-CoA decarboxylase delta subunit [].; GO: 0008948 oxaloacetate decarboxylase activity, 0015081 sodium ion transmembrane transporter activity, 0071436 sodium ion export, 0016020 membrane
Probab=29.37 E-value=69 Score=23.13 Aligned_cols=10 Identities=50% Similarity=0.458 Sum_probs=5.2
Q ss_pred hhhhhHhhhh
Q 018496 304 CIGSIIVFGA 313 (355)
Q Consensus 304 ~iG~~lv~~G 313 (355)
++|+.+||..
T Consensus 9 i~Gm~iVF~~ 18 (79)
T PF04277_consen 9 IIGMGIVFLV 18 (79)
T ss_pred HHHHHHHHHH
Confidence 4555555543
No 138
>PRK12437 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=29.15 E-value=44 Score=30.70 Aligned_cols=25 Identities=16% Similarity=0.139 Sum_probs=19.3
Q ss_pred CchhhhhhhhHhhhhHHhhhhhccc
Q 018496 299 LSWEQCIGSIIVFGALYTRSFFKKV 323 (355)
Q Consensus 299 ~t~~~~iG~~lv~~Gi~~~~~~k~k 323 (355)
+|..|+++..+++.|+.+..+.++|
T Consensus 235 ls~~Q~~sl~~i~~g~~~~~~~~~~ 259 (269)
T PRK12437 235 LRIAQVISIPLIIIGIILIIYRRKK 259 (269)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 7999999999999887665544433
No 139
>PF15102 TMEM154: TMEM154 protein family
Probab=28.59 E-value=43 Score=27.68 Aligned_cols=20 Identities=10% Similarity=0.388 Sum_probs=9.6
Q ss_pred hHhhhhHHhhhhhccccCCC
Q 018496 308 IIVFGALYTRSFFKKVSEKP 327 (355)
Q Consensus 308 ~lv~~Gi~~~~~~k~k~~~~ 327 (355)
.+++..+++..+.|||+.|.
T Consensus 70 lLLl~vV~lv~~~kRkr~K~ 89 (146)
T PF15102_consen 70 LLLLSVVCLVIYYKRKRTKQ 89 (146)
T ss_pred HHHHHHHHheeEEeecccCC
Confidence 33334455555555555443
No 140
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=27.59 E-value=1.6e+02 Score=22.62 Aligned_cols=29 Identities=7% Similarity=0.093 Sum_probs=24.5
Q ss_pred HHHHHHhccccCchhhHHHHHHHHhhHHh
Q 018496 129 IWGTLIMQKRYKGYDYFLALLVTLGCSIF 157 (355)
Q Consensus 129 i~~~l~~~~k~s~~~~ls~~li~~Gv~l~ 157 (355)
.++.+.+||+.+|..+.+.+++.+|+..+
T Consensus 85 ~Fsvfyl~epl~~~~l~a~~~i~gav~fi 113 (116)
T COG3169 85 PFSVFYLKEPLRWNYLWAFLLILGAVYFI 113 (116)
T ss_pred HHHHHHHcCcchHHHHHHHHHHHHHHHHh
Confidence 35788899999999999988888887764
No 141
>PRK14778 lipoprotein signal peptidase; Provisional
Probab=24.36 E-value=82 Score=27.29 Aligned_cols=13 Identities=15% Similarity=0.184 Sum_probs=6.6
Q ss_pred hhhhhhhhHhhhh
Q 018496 301 WEQCIGSIIVFGA 313 (355)
Q Consensus 301 ~~~~iG~~lv~~G 313 (355)
..++.=++++++.
T Consensus 115 iFNvADi~I~iGv 127 (186)
T PRK14778 115 IFNLADVFIIVGG 127 (186)
T ss_pred eeEHHHHHHHHHH
Confidence 3455555555543
No 142
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=23.01 E-value=3.7e+02 Score=21.00 Aligned_cols=29 Identities=7% Similarity=-0.012 Sum_probs=23.3
Q ss_pred HHHHHHHhccccCchhhHHHHHHHHhhHH
Q 018496 128 MIWGTLIMQKRYKGYDYFLALLVTLGCSI 156 (355)
Q Consensus 128 ~i~~~l~~~~k~s~~~~ls~~li~~Gv~l 156 (355)
..++.+++||+++|....+-+++++++..
T Consensus 77 ~~Fsv~~l~E~l~~n~l~af~~i~~av~f 105 (108)
T PF04342_consen 77 APFSVFYLGEPLKWNYLWAFLCILGAVYF 105 (108)
T ss_pred HHHHHHHhCCCccHHHHHHHHHHHHhhhe
Confidence 35678899999999999998888766543
No 143
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=22.28 E-value=89 Score=28.94 Aligned_cols=106 Identities=14% Similarity=0.075 Sum_probs=53.9
Q ss_pred ehHHHHHHHHHHHHHHHHHHHHhhcC--C-----CCCCCchhHHH-HHHHHHHHHHHHhHHhhhcCchhHHHHHhhhchH
Q 018496 54 YSLFLVFCNRLMTSAVSAGTLIASRK--A-----IDPVAPVYKYC-LVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMI 125 (355)
Q Consensus 54 ~p~~l~~~~~~~~~l~~~~~~~~~~~--~-----~~~~~~~~~~~-~~~~~~~~~~~~~~~sl~~ls~~~~~i~ks~~pi 125 (355)
.-+-+++.+-+.+.++..+.+...+. . ..+...+|..+ +-|++++...+....=+|..|.-|+.+--..+-.
T Consensus 214 ~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsglfgF~mgyvTg~QIK~TSplThnISgTAka~ 293 (347)
T KOG1442|consen 214 CIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGLFGFAMGYVTGWQIKVTSPLTHNISGTAKAA 293 (347)
T ss_pred eehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHHHHHHhhheeeEEEEecccceeeecHhHHHH
Confidence 34566677766666666554443221 1 11122333333 3344444444444444444443333332222223
Q ss_pred HHHHHHHHHhccccCchhhHHHHHHHHhhHHhhc
Q 018496 126 PVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFIL 159 (355)
Q Consensus 126 ~v~i~~~l~~~~k~s~~~~ls~~li~~Gv~l~~~ 159 (355)
.--+++..+++|.-+..-|-+.+++..|......
T Consensus 294 aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~ 327 (347)
T KOG1442|consen 294 AQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTL 327 (347)
T ss_pred HHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHH
Confidence 3334566778887777777777777777666554
No 144
>TIGR00544 lgt prolipoprotein diacylglyceryl transferase. The conversion of lipoprotein precursors into lipoproteins consists of three steps. First, the enzyme described by this model transfers a diacylglyceryl moiety from phosphatidylglycerol to the side chain of a Cys that will become the new N-terminus. Second, the signal peptide is removed by signal peptidase II. Finally, the free amino group of the new N-terminal Cys is acylated by apolipoprotein N-acyltransferase.
Probab=21.12 E-value=73 Score=29.43 Aligned_cols=24 Identities=21% Similarity=0.245 Sum_probs=19.1
Q ss_pred CchhhhhhhhHhhhhHHhhhhhcc
Q 018496 299 LSWEQCIGSIIVFGALYTRSFFKK 322 (355)
Q Consensus 299 ~t~~~~iG~~lv~~Gi~~~~~~k~ 322 (355)
+|..|+++..+++.|+.+..+.|+
T Consensus 246 lt~~Q~~sl~~i~~g~~~~~~~~~ 269 (278)
T TIGR00544 246 ISMGQILSLLMIAGILIIMLLAYK 269 (278)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHh
Confidence 699999999999999876555443
No 145
>PF02673 BacA: Bacitracin resistance protein BacA; InterPro: IPR003824 This is a family of small, highly hydrophobic proteins. Over-expression of this protein in Escherichia coli is associated with bacitracin resistance [], and the protein was originally proposed to be an undecaprenol kinase called bacA. BacA protein, however, does not show undecaprenol phosphokinase activity []. It is now known to be an undecaprenyl pyrophosphate phosphatase (3.6.1.27 from EC) and is renamed UppP. It is not the only protein associated with bacitracin resistance [, ].; GO: 0050380 undecaprenyl-diphosphatase activity, 0016311 dephosphorylation, 0016020 membrane
Probab=21.09 E-value=5.5e+02 Score=23.44 Aligned_cols=79 Identities=9% Similarity=0.100 Sum_probs=38.0
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCce-eehHHHHHHHHHHHHHHHHHHHHhhc--CCCCCCCchhHH
Q 018496 14 SRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYF-KYSLFLVFCNRLMTSAVSAGTLIASR--KAIDPVAPVYKY 90 (355)
Q Consensus 14 ~~~~~~~~~~~g~~~~~~~~~~~~e~i~~~~~~~~~~~f-~~p~~l~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~ 90 (355)
++..++...+......-...|+.-|+..+. .+ +.|..+... .+++.++.+..-..++ ++..++..+++-
T Consensus 76 ~~~~~~~~~iiiatip~~v~G~~~~~~i~~-------~~~~~~~~v~~~-Li~~g~lL~~~~~~~~~~~~~~~~~~~~da 147 (259)
T PF02673_consen 76 NPDRRLLLLIIIATIPTGVVGLLFKDFIEA-------LFFSSPLVVAIA-LIITGLLLWLADRLKRKGRKDEEDITFKDA 147 (259)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HhhhchHHHHHH-HHHHHHHHHHHHHHccCCCCCcccCCHHHH
Confidence 444555555544444555555555444422 12 345543333 3333333322222222 223345678888
Q ss_pred HHHHHHHHHH
Q 018496 91 CLVSMSNILT 100 (355)
Q Consensus 91 ~~~~~~~~~~ 100 (355)
+.+|+++..+
T Consensus 148 l~iGl~Q~lA 157 (259)
T PF02673_consen 148 LIIGLAQGLA 157 (259)
T ss_pred HHHHHHHHcc
Confidence 8899887555
No 146
>PRK00052 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=20.76 E-value=75 Score=29.17 Aligned_cols=27 Identities=7% Similarity=0.043 Sum_probs=20.7
Q ss_pred CCchhhhhhhhHhhhhHHhhhhhcccc
Q 018496 298 PLSWEQCIGSIIVFGALYTRSFFKKVS 324 (355)
Q Consensus 298 ~~t~~~~iG~~lv~~Gi~~~~~~k~k~ 324 (355)
.+|..|+++..+++.|+.+..+.++++
T Consensus 236 ~ls~~Q~isl~~~~~gi~~~~~~~~~~ 262 (269)
T PRK00052 236 GLTMGQILSIPMILLGIILLIWAYRKK 262 (269)
T ss_pred CcCHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 369999999999999987666554443
No 147
>PF15471 TMEM171: Transmembrane protein family 171
Probab=20.41 E-value=86 Score=28.70 Aligned_cols=38 Identities=18% Similarity=0.093 Sum_probs=22.8
Q ss_pred hhhhhhhhHhhhhHHhhhhhccccC-CCCCCCCCCcccc
Q 018496 301 WEQCIGSIIVFGALYTRSFFKKVSE-KPRPSEHPMENMH 338 (355)
Q Consensus 301 ~~~~iG~~lv~~Gi~~~~~~k~k~~-~~~~~~~~~~~~~ 338 (355)
..|++|-.+++.|+.+.....-||| .-+..+|..|.||
T Consensus 161 slQImGPlIVl~GLCFFVVAHvKKr~nln~~qd~se~Ee 199 (319)
T PF15471_consen 161 SLQIMGPLIVLVGLCFFVVAHVKKRNNLNGSQDASESEE 199 (319)
T ss_pred ehhhhhhHHHHHhhhhhheeeeeeccCCCcccCcccccc
Confidence 4688999999999876665533332 2333444433333
Done!