Query 018497
Match_columns 355
No_of_seqs 171 out of 1550
Neff 9.8
Searched_HMMs 29240
Date Mon Mar 25 16:10:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018497.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018497hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2woz_A Kelch repeat and BTB do 99.6 1.2E-12 4E-17 117.9 27.0 232 70-324 26-293 (318)
2 3ii7_A Kelch-like protein 7; p 99.6 1.5E-12 5.3E-17 116.4 27.5 242 58-325 14-279 (306)
3 4asc_A Kelch repeat and BTB do 99.6 1E-12 3.5E-17 118.1 26.1 235 70-324 15-283 (315)
4 2xn4_A Kelch-like protein 2; s 99.6 3E-12 1E-16 114.2 26.0 229 71-325 33-283 (302)
5 1zgk_A Kelch-like ECH-associat 99.5 2.7E-12 9.3E-17 115.0 25.2 231 70-326 41-295 (308)
6 2vpj_A Kelch-like protein 12; 99.5 7.2E-12 2.5E-16 111.7 27.4 230 70-325 33-285 (301)
7 3ii7_A Kelch-like protein 7; p 99.4 1.5E-11 5E-16 110.0 21.6 192 114-325 23-232 (306)
8 2vpj_A Kelch-like protein 12; 99.4 8.7E-11 3E-15 104.6 23.4 190 114-325 30-238 (301)
9 4asc_A Kelch repeat and BTB do 99.4 7.9E-11 2.7E-15 105.7 23.3 197 115-325 13-228 (315)
10 2xn4_A Kelch-like protein 2; s 99.4 1.1E-10 3.9E-15 103.9 21.8 190 115-325 30-236 (302)
11 1zgk_A Kelch-like ECH-associat 99.3 1.2E-10 4E-15 104.2 20.8 191 114-325 38-247 (308)
12 2uvk_A YJHT; unknown function, 99.3 2.4E-10 8.1E-15 104.4 20.7 217 97-326 14-302 (357)
13 2woz_A Kelch repeat and BTB do 99.3 4.1E-10 1.4E-14 101.1 20.3 195 115-325 24-238 (318)
14 2uvk_A YJHT; unknown function, 99.1 3.2E-08 1.1E-12 90.1 25.1 236 70-324 33-348 (357)
15 1fs1_A SKP2 F-BOX, cyclin A/CD 99.1 5.1E-11 1.7E-15 76.8 3.5 41 4-44 8-48 (53)
16 2zwa_A Leucine carboxyl methyl 99.1 1.9E-08 6.6E-13 99.9 21.9 206 101-327 396-644 (695)
17 2e31_A FBS1, F-box only protei 99.0 1.2E-10 4.1E-15 101.8 4.9 50 3-52 49-99 (297)
18 2ovr_B FBW7, F-BOX/WD repeat p 98.9 3.7E-06 1.3E-10 78.5 30.9 277 4-322 18-312 (445)
19 3v7d_B Cell division control p 98.9 4.2E-06 1.4E-10 78.4 29.6 43 6-48 16-59 (464)
20 1p22_A F-BOX/WD-repeat protein 98.8 2.3E-06 7.9E-11 79.7 24.2 277 6-322 12-329 (435)
21 1k3i_A Galactose oxidase precu 98.6 2.5E-06 8.4E-11 84.2 18.9 244 71-325 222-504 (656)
22 2zwa_A Leucine carboxyl methyl 98.4 7.4E-06 2.5E-10 81.3 16.0 150 158-326 417-591 (695)
23 1k3i_A Galactose oxidase precu 98.2 8.4E-06 2.9E-10 80.4 11.5 147 158-324 171-329 (656)
24 3l2o_B F-box only protein 4; s 97.8 1E-05 3.5E-10 70.0 3.7 50 5-54 5-54 (312)
25 2ast_B S-phase kinase-associat 97.6 3E-05 1E-09 69.5 3.1 40 4-43 8-47 (336)
26 2p1m_B Transport inhibitor res 97.0 0.00021 7.1E-09 69.2 2.2 36 3-38 4-40 (594)
27 3ogk_B Coronatine-insensitive 96.8 0.00042 1.4E-08 67.1 2.0 35 4-38 12-47 (592)
28 3jrp_A Fusion protein of prote 96.4 0.26 8.9E-06 43.5 17.8 69 243-320 171-242 (379)
29 2z2n_A Virginiamycin B lyase; 96.2 0.51 1.8E-05 40.1 22.2 185 97-322 104-299 (299)
30 3mbr_X Glutamine cyclotransfer 95.8 0.74 2.5E-05 38.8 18.3 115 186-327 25-143 (243)
31 3g4e_A Regucalcin; six bladed 95.7 0.91 3.1E-05 39.1 20.0 197 100-327 22-239 (297)
32 3dsm_A Uncharacterized protein 95.7 1 3.5E-05 39.5 23.8 195 102-326 2-221 (328)
33 3nol_A Glutamine cyclotransfer 95.6 0.32 1.1E-05 41.6 13.5 115 187-327 49-165 (262)
34 3ei3_B DNA damage-binding prot 95.3 1.5 5.1E-05 39.0 22.2 179 113-321 94-285 (383)
35 3jro_A Fusion protein of prote 95.0 0.46 1.6E-05 47.2 15.0 69 243-320 169-240 (753)
36 3hfq_A Uncharacterized protein 94.8 0.64 2.2E-05 40.8 14.2 149 153-324 17-178 (347)
37 4aez_A CDC20, WD repeat-contai 94.7 2.2 7.6E-05 38.3 20.8 175 113-323 111-298 (401)
38 2iwa_A Glutamine cyclotransfer 94.2 1.5 5E-05 37.6 14.2 110 191-327 32-145 (266)
39 1l0q_A Surface layer protein; 94.2 2.8 9.6E-05 37.1 21.1 187 97-323 37-238 (391)
40 4gqb_B Methylosome protein 50; 94.1 2.9 0.0001 36.9 17.1 100 209-324 192-295 (344)
41 3nok_A Glutaminyl cyclase; bet 94.1 0.87 3E-05 38.9 12.3 111 188-327 62-174 (268)
42 3dwl_C Actin-related protein 2 94.0 1.1 3.6E-05 39.8 13.7 179 113-321 31-239 (377)
43 1k8k_C P40, ARP2/3 complex 41 94.0 2.9 0.0001 36.5 19.4 194 101-322 18-237 (372)
44 4e54_B DNA damage-binding prot 93.9 0.83 2.8E-05 41.8 13.1 179 113-321 140-330 (435)
45 4gga_A P55CDC, cell division c 93.8 3.6 0.00012 37.1 22.1 191 100-324 114-316 (420)
46 1l0q_A Surface layer protein; 93.8 3.4 0.00011 36.6 21.1 180 104-324 3-195 (391)
47 3q7m_A Lipoprotein YFGL, BAMB; 93.6 3.7 0.00013 36.4 21.3 186 97-324 98-302 (376)
48 3u4y_A Uncharacterized protein 93.4 3.4 0.00012 35.5 18.5 185 102-321 9-210 (331)
49 3fm0_A Protein CIAO1; WDR39,SG 93.3 3.9 0.00013 35.9 18.0 183 100-316 25-223 (345)
50 1ri6_A Putative isomerase YBHE 93.3 3.6 0.00012 35.3 17.4 59 258-322 151-215 (343)
51 2qc5_A Streptogramin B lactona 93.2 3.4 0.00012 34.8 22.7 190 96-325 24-224 (300)
52 3no2_A Uncharacterized protein 93.2 3.6 0.00012 35.1 17.2 186 103-325 5-203 (276)
53 3q7m_A Lipoprotein YFGL, BAMB; 93.0 1.9 6.5E-05 38.3 13.7 111 186-323 49-167 (376)
54 3bws_A Protein LP49; two-domai 92.7 5.3 0.00018 35.9 22.0 190 100-324 178-396 (433)
55 4g56_B MGC81050 protein; prote 92.7 3.3 0.00011 36.7 14.7 100 209-324 204-307 (357)
56 3vgz_A Uncharacterized protein 92.7 4.6 0.00016 34.9 23.4 187 101-323 99-308 (353)
57 3dsm_A Uncharacterized protein 92.6 4.8 0.00017 35.1 20.9 206 96-330 88-314 (328)
58 3bg1_A Protein SEC13 homolog; 92.5 4.7 0.00016 34.8 15.3 55 258-318 189-247 (316)
59 1nir_A Nitrite reductase; hemo 92.3 7.8 0.00027 36.7 20.3 189 101-324 147-361 (543)
60 3v9f_A Two-component system se 92.2 9.7 0.00033 37.7 22.6 191 101-325 416-618 (781)
61 1gxr_A ESG1, transducin-like e 91.7 5.7 0.0002 33.9 20.5 97 209-324 163-261 (337)
62 2qc5_A Streptogramin B lactona 91.6 5.5 0.00019 33.5 22.6 192 96-327 66-268 (300)
63 3fvz_A Peptidyl-glycine alpha- 91.5 6.4 0.00022 34.2 17.5 113 186-318 200-322 (329)
64 3nol_A Glutamine cyclotransfer 91.5 4.9 0.00017 34.1 13.4 112 187-327 93-211 (262)
65 1q7f_A NHL, brain tumor CG1071 91.4 5.7 0.00019 33.4 25.4 194 97-327 35-247 (286)
66 3nok_A Glutaminyl cyclase; bet 91.2 6.4 0.00022 33.5 13.8 112 187-327 102-220 (268)
67 1nir_A Nitrite reductase; hemo 91.1 10 0.00035 35.8 18.4 108 209-322 346-462 (543)
68 3e5z_A Putative gluconolactona 91.1 6.4 0.00022 33.4 17.3 34 97-132 74-107 (296)
69 3mbr_X Glutamine cyclotransfer 90.9 6.4 0.00022 33.0 16.1 112 187-327 71-189 (243)
70 3fvz_A Peptidyl-glycine alpha- 90.6 7.9 0.00027 33.6 18.2 132 115-266 69-226 (329)
71 2z2n_A Virginiamycin B lyase; 90.4 7.1 0.00024 32.7 24.7 192 96-327 61-263 (299)
72 3hfq_A Uncharacterized protein 90.2 8.6 0.00029 33.3 24.4 119 189-326 196-327 (347)
73 3jrp_A Fusion protein of prote 90.0 8.9 0.00031 33.3 16.5 97 209-320 33-136 (379)
74 2pm7_B Protein transport prote 89.7 8.7 0.0003 32.6 17.9 67 244-319 170-239 (297)
75 1gxr_A ESG1, transducin-like e 89.4 9.2 0.00032 32.5 22.1 106 190-323 194-301 (337)
76 1rwi_B Serine/threonine-protei 89.3 8.2 0.00028 31.9 18.7 188 96-323 28-227 (270)
77 3sjl_D Methylamine dehydrogena 89.2 4.7 0.00016 36.4 12.0 123 190-329 237-375 (386)
78 3bws_A Protein LP49; two-domai 88.8 5.2 0.00018 35.9 12.4 113 190-323 133-248 (433)
79 4aow_A Guanine nucleotide-bind 88.7 10 0.00036 32.3 17.0 101 209-323 150-251 (340)
80 3bg1_A Protein SEC13 homolog; 88.7 11 0.00037 32.4 15.3 106 209-326 189-302 (316)
81 3k26_A Polycomb protein EED; W 88.4 11 0.00039 32.3 16.8 66 244-318 299-366 (366)
82 4h5i_A Guanine nucleotide-exch 88.2 13 0.00044 32.8 23.1 190 99-319 141-344 (365)
83 3f3f_A Nucleoporin SEH1; struc 88.2 8.7 0.0003 32.6 13.0 102 209-320 33-145 (351)
84 2dg1_A DRP35, lactonase; beta 88.2 10 0.00036 32.5 13.6 117 189-324 54-177 (333)
85 3jro_A Fusion protein of prote 87.3 18 0.00062 35.6 16.1 98 209-320 31-134 (753)
86 1npe_A Nidogen, entactin; glyc 86.4 13 0.00045 30.9 23.2 187 99-326 44-247 (267)
87 3hrp_A Uncharacterized protein 85.3 21 0.00072 32.2 23.6 195 96-325 135-361 (409)
88 3dwl_C Actin-related protein 2 85.0 1.7 5.7E-05 38.4 6.6 137 158-319 38-178 (377)
89 2ojh_A Uncharacterized protein 85.0 15 0.00051 30.3 21.0 195 97-325 47-265 (297)
90 4aow_A Guanine nucleotide-bind 84.8 17 0.00059 30.9 21.6 93 209-320 237-339 (340)
91 3g4e_A Regucalcin; six bladed 84.7 17 0.00059 30.8 14.3 106 190-319 24-140 (297)
92 3hrp_A Uncharacterized protein 84.5 13 0.00045 33.6 12.5 110 189-324 140-255 (409)
93 2p4o_A Hypothetical protein; p 84.1 19 0.00065 30.7 21.5 189 100-323 40-246 (306)
94 1pjx_A Dfpase, DIISOPROPYLFLUO 83.9 18 0.00063 30.4 21.3 189 113-325 44-264 (314)
95 1k8k_C P40, ARP2/3 complex 41 83.4 21 0.00072 30.8 20.6 68 243-324 213-282 (372)
96 1q7f_A NHL, brain tumor CG1071 83.3 19 0.00064 30.1 23.7 184 100-318 86-280 (286)
97 2fp8_A Strictosidine synthase; 83.2 21 0.00073 30.6 20.7 188 113-327 38-278 (322)
98 1qks_A Cytochrome CD1 nitrite 83.1 33 0.0011 32.6 22.5 193 102-326 166-382 (567)
99 1rwi_B Serine/threonine-protei 83.1 18 0.00062 29.7 20.1 182 97-320 72-266 (270)
100 2ojh_A Uncharacterized protein 82.8 19 0.00064 29.6 20.0 181 113-324 20-212 (297)
101 4aez_A CDC20, WD repeat-contai 82.6 25 0.00087 31.1 21.8 100 208-323 283-385 (401)
102 3mmy_A MRNA export factor; mRN 82.0 24 0.0008 30.2 19.3 33 287-322 276-308 (368)
103 2aq5_A Coronin-1A; WD40 repeat 81.8 27 0.00092 30.8 18.5 187 113-327 152-351 (402)
104 1ri6_A Putative isomerase YBHE 81.8 23 0.00079 30.0 24.5 108 209-325 200-317 (343)
105 3e5z_A Putative gluconolactona 81.6 23 0.00077 29.8 23.0 189 113-327 48-255 (296)
106 2p4o_A Hypothetical protein; p 81.5 24 0.00082 30.1 13.5 108 189-320 41-149 (306)
107 2mad_H Methylamine dehydrogena 81.4 25 0.00087 31.2 13.0 73 244-324 279-356 (373)
108 2dg1_A DRP35, lactonase; beta 81.4 24 0.00084 30.1 21.8 200 100-327 53-272 (333)
109 3ow8_A WD repeat-containing pr 80.9 26 0.00089 30.1 22.5 97 209-323 186-284 (321)
110 2pm9_A Protein WEB1, protein t 80.8 29 0.00098 30.5 16.7 95 210-321 241-340 (416)
111 3scy_A Hypothetical bacterial 80.1 29 0.00098 30.1 23.7 108 209-324 233-345 (361)
112 1n7d_A LDL receptor, low-densi 80.1 8.4 0.00029 37.8 9.9 115 186-324 500-620 (699)
113 2pm7_B Protein transport prote 79.9 26 0.0009 29.5 14.0 97 209-319 31-133 (297)
114 3v65_B Low-density lipoprotein 79.1 35 0.0012 30.4 22.7 186 100-325 125-326 (386)
115 2ad6_A Methanol dehydrogenase 78.6 13 0.00044 35.4 10.5 115 186-323 58-190 (571)
116 3sfz_A APAF-1, apoptotic pepti 78.6 36 0.0012 35.4 14.8 173 113-321 981-1161(1249)
117 3v65_B Low-density lipoprotein 78.5 36 0.0012 30.3 23.3 182 102-324 87-283 (386)
118 3fm0_A Protein CIAO1; WDR39,SG 78.0 33 0.0011 29.6 16.9 102 209-323 83-186 (345)
119 2iwa_A Glutamine cyclotransfer 78.0 31 0.0011 29.2 17.8 183 101-319 30-238 (266)
120 1kv9_A Type II quinohemoprotei 77.5 13 0.00044 36.2 10.3 117 186-324 62-193 (668)
121 2fp8_A Strictosidine synthase; 77.5 33 0.0011 29.3 16.5 133 115-267 165-313 (322)
122 3mkq_A Coatomer beta'-subunit; 77.2 57 0.0019 31.8 23.1 98 209-323 163-264 (814)
123 3m0c_C LDL receptor, low-densi 77.0 62 0.0021 32.2 26.0 132 186-341 518-655 (791)
124 3mmy_A MRNA export factor; mRN 76.2 26 0.00089 29.9 11.3 70 244-324 54-123 (368)
125 3m0c_C LDL receptor, low-densi 75.7 67 0.0023 32.0 20.9 110 190-325 482-596 (791)
126 4gga_A P55CDC, cell division c 75.6 39 0.0013 30.1 12.6 88 222-323 95-183 (420)
127 3i2n_A WD repeat-containing pr 74.9 38 0.0013 28.8 18.0 97 209-320 139-245 (357)
128 3dr2_A Exported gluconolactona 74.6 20 0.00069 30.5 9.9 112 190-325 55-185 (305)
129 2ghs_A AGR_C_1268P; regucalcin 74.4 41 0.0014 28.9 15.7 106 190-324 60-174 (326)
130 4e54_B DNA damage-binding prot 74.2 16 0.00056 32.9 9.6 101 209-323 142-245 (435)
131 2hes_X YDR267CP; beta-propelle 74.2 41 0.0014 28.8 17.6 107 209-325 175-287 (330)
132 1yfq_A Cell cycle arrest prote 74.2 39 0.0013 28.6 21.6 103 209-322 170-286 (342)
133 4ggc_A P55CDC, cell division c 73.6 39 0.0013 28.2 23.0 44 100-147 34-78 (318)
134 4a2l_A BT_4663, two-component 73.6 73 0.0025 31.4 23.9 179 115-324 193-392 (795)
135 1kb0_A Quinohemoprotein alcoho 73.4 14 0.00048 36.0 9.4 117 186-324 73-205 (677)
136 3vl1_A 26S proteasome regulato 73.2 48 0.0016 29.1 14.1 98 209-323 119-217 (420)
137 4a11_B DNA excision repair pro 72.8 47 0.0016 28.8 18.2 101 209-322 267-369 (408)
138 1got_B GT-beta; complex (GTP-b 72.4 46 0.0016 28.6 22.9 96 209-321 164-260 (340)
139 4g56_B MGC81050 protein; prote 72.3 49 0.0017 28.8 18.5 92 209-319 249-344 (357)
140 1r5m_A SIR4-interacting protei 72.1 50 0.0017 28.8 18.5 97 209-317 310-424 (425)
141 3tc9_A Hypothetical hydrolase; 72.1 57 0.002 29.5 16.0 112 190-324 149-263 (430)
142 2aq5_A Coronin-1A; WD40 repeat 71.9 52 0.0018 28.9 26.4 117 190-325 187-308 (402)
143 2ovr_B FBW7, F-BOX/WD repeat p 71.8 55 0.0019 29.2 24.2 184 96-321 163-351 (445)
144 4hw6_A Hypothetical protein, I 70.9 62 0.0021 29.4 13.6 113 186-321 143-262 (433)
145 2hz6_A Endoplasmic reticulum t 70.6 47 0.0016 29.3 11.6 102 189-323 91-197 (369)
146 1yiq_A Quinohemoprotein alcoho 70.6 20 0.00068 35.0 9.7 116 186-323 66-197 (689)
147 3no2_A Uncharacterized protein 70.1 48 0.0016 27.8 11.7 119 187-327 44-164 (276)
148 3mkq_A Coatomer beta'-subunit; 69.9 85 0.0029 30.6 20.1 98 209-322 119-221 (814)
149 3f3f_A Nucleoporin SEH1; struc 69.3 49 0.0017 27.6 14.5 36 287-325 309-345 (351)
150 2ynn_A Coatomer subunit beta'; 68.9 51 0.0018 27.7 23.1 98 209-324 163-265 (304)
151 3i2n_A WD repeat-containing pr 68.9 53 0.0018 27.8 21.0 112 190-319 223-354 (357)
152 4ggc_A P55CDC, cell division c 68.7 50 0.0017 27.5 12.9 60 258-324 45-104 (318)
153 1jmx_B Amine dehydrogenase; ox 68.5 26 0.00088 29.8 9.3 109 188-320 8-136 (349)
154 1p22_A F-BOX/WD-repeat protein 68.0 67 0.0023 28.6 15.8 113 186-323 178-290 (435)
155 3o4h_A Acylamino-acid-releasin 67.6 81 0.0028 29.5 15.4 181 103-323 123-319 (582)
156 3v64_C Agrin; beta propeller, 67.6 63 0.0022 28.2 24.4 187 99-325 81-283 (349)
157 3v64_C Agrin; beta propeller, 66.8 65 0.0022 28.1 23.1 180 102-324 44-240 (349)
158 2xyi_A Probable histone-bindin 66.4 72 0.0025 28.5 15.2 102 209-322 300-414 (430)
159 3c75_H MADH, methylamine dehyd 66.3 78 0.0027 28.8 12.4 73 243-323 330-407 (426)
160 3frx_A Guanine nucleotide-bind 65.7 59 0.002 27.6 11.0 98 217-323 3-101 (319)
161 1erj_A Transcriptional repress 65.5 71 0.0024 28.1 24.0 194 100-322 132-345 (393)
162 3v9f_A Two-component system se 65.2 1.1E+02 0.0037 30.0 21.3 101 209-325 427-531 (781)
163 2ynn_A Coatomer subunit beta'; 65.1 62 0.0021 27.2 15.6 94 209-320 35-130 (304)
164 3vgz_A Uncharacterized protein 65.0 64 0.0022 27.3 23.0 98 209-323 164-267 (353)
165 3iz6_a 40S ribosomal protein R 64.9 72 0.0024 27.9 20.0 104 209-324 180-286 (380)
166 2xzm_R RACK1; ribosome, transl 64.7 67 0.0023 27.5 11.7 73 243-322 38-111 (343)
167 3ow8_A WD repeat-containing pr 64.3 67 0.0023 27.3 20.4 97 209-323 144-242 (321)
168 3u4y_A Uncharacterized protein 64.2 65 0.0022 27.1 22.3 71 243-325 186-259 (331)
169 1pby_B Quinohemoprotein amine 64.1 38 0.0013 28.5 9.4 99 210-327 220-320 (337)
170 2ghs_A AGR_C_1268P; regucalcin 64.1 69 0.0024 27.4 23.9 200 100-327 58-269 (326)
171 1ijq_A LDL receptor, low-densi 64.1 69 0.0024 27.4 21.8 111 189-324 87-201 (316)
172 2hes_X YDR267CP; beta-propelle 63.4 70 0.0024 27.3 19.1 69 239-318 256-328 (330)
173 3hxj_A Pyrrolo-quinoline quino 63.0 53 0.0018 27.7 10.2 29 190-227 147-175 (330)
174 2pbi_B Guanine nucleotide-bind 62.9 75 0.0026 27.5 21.0 90 209-315 262-354 (354)
175 1flg_A Protein (quinoprotein e 62.7 44 0.0015 31.8 10.2 120 186-324 64-199 (582)
176 2vdu_B TRNA (guanine-N(7)-)-me 62.5 87 0.003 28.0 21.3 66 244-322 210-275 (450)
177 3sov_A LRP-6, low-density lipo 62.0 77 0.0026 27.3 22.3 110 190-325 133-246 (318)
178 4gqb_B Methylosome protein 50; 61.5 80 0.0027 27.3 12.7 62 258-324 103-164 (344)
179 2ymu_A WD-40 repeat protein; u 60.7 1E+02 0.0036 28.3 24.5 98 209-325 407-505 (577)
180 3vl1_A 26S proteasome regulato 60.6 86 0.003 27.4 23.5 70 243-325 258-331 (420)
181 3ei3_B DNA damage-binding prot 60.4 84 0.0029 27.2 19.4 94 209-318 141-236 (383)
182 1pgu_A Actin interacting prote 59.8 1.1E+02 0.0037 28.3 14.2 95 209-319 467-573 (615)
183 3scy_A Hypothetical bacterial 59.8 84 0.0029 27.0 15.7 73 243-325 221-300 (361)
184 2pm9_A Protein WEB1, protein t 59.5 89 0.003 27.2 16.0 64 244-319 178-250 (416)
185 3p5b_L Low density lipoprotein 59.1 99 0.0034 27.6 24.4 127 190-341 213-343 (400)
186 2oiz_A Aromatic amine dehydrog 59.0 91 0.0031 27.2 13.3 72 244-325 266-341 (361)
187 1vyh_C Platelet-activating fac 58.1 1E+02 0.0034 27.3 22.7 65 244-321 308-372 (410)
188 4ery_A WD repeat-containing pr 57.5 83 0.0028 26.2 23.3 98 209-323 129-228 (312)
189 3iz6_a 40S ribosomal protein R 57.0 99 0.0034 26.9 18.8 98 209-320 271-377 (380)
190 3vu4_A KMHSV2; beta-propeller 56.8 96 0.0033 26.7 11.7 65 243-320 206-273 (355)
191 3gre_A Serine/threonine-protei 56.8 1E+02 0.0036 27.1 13.3 100 209-324 192-298 (437)
192 4a11_B DNA excision repair pro 56.7 96 0.0033 26.7 20.2 99 209-321 166-279 (408)
193 4h5i_A Guanine nucleotide-exch 56.6 1E+02 0.0034 26.8 16.4 106 210-322 198-304 (365)
194 3zwl_B Eukaryotic translation 56.6 90 0.0031 26.4 15.1 101 209-318 96-206 (369)
195 2hqs_A Protein TOLB; TOLB, PAL 56.3 1.1E+02 0.0037 27.2 22.0 180 115-324 159-350 (415)
196 3dr2_A Exported gluconolactona 56.1 90 0.0031 26.2 20.9 201 102-328 56-277 (305)
197 4a2l_A BT_4663, two-component 55.9 1.6E+02 0.0054 28.9 25.1 186 102-324 367-577 (795)
198 1ijq_A LDL receptor, low-densi 55.6 97 0.0033 26.4 24.4 186 99-324 38-245 (316)
199 1w6s_A Methanol dehydrogenase 53.1 61 0.0021 31.0 9.3 29 186-223 58-90 (599)
200 1pgu_A Actin interacting prote 53.0 1.4E+02 0.0048 27.5 20.1 67 244-323 172-243 (615)
201 1got_B GT-beta; complex (GTP-b 52.4 1.1E+02 0.0038 26.1 22.1 91 209-315 248-340 (340)
202 1sq9_A Antiviral protein SKI8; 51.1 1.2E+02 0.0041 26.1 21.7 105 209-323 207-327 (397)
203 1r5m_A SIR4-interacting protei 50.8 1.2E+02 0.0042 26.1 24.4 97 209-324 227-325 (425)
204 3odt_A Protein DOA1; ubiquitin 50.6 1E+02 0.0036 25.3 23.0 95 209-323 205-301 (313)
205 4a0p_A LRP6, LRP-6, low-densit 50.4 1.8E+02 0.0061 27.9 25.9 171 114-323 14-202 (628)
206 1npe_A Nidogen, entactin; glyc 50.3 1E+02 0.0035 25.1 19.5 112 190-324 90-204 (267)
207 1n7d_A LDL receptor, low-densi 50.2 1.5E+02 0.005 28.9 11.8 56 186-252 544-603 (699)
208 4hw6_A Hypothetical protein, I 49.5 1.5E+02 0.0051 26.8 14.6 63 190-266 354-432 (433)
209 3dm0_A Maltose-binding peripla 49.1 1.8E+02 0.0063 27.7 21.2 91 209-317 583-692 (694)
210 3zwl_B Eukaryotic translation 47.4 1.3E+02 0.0044 25.4 24.6 69 244-324 187-255 (369)
211 4a0p_A LRP6, LRP-6, low-densit 47.1 2E+02 0.0068 27.5 23.3 182 99-322 45-241 (628)
212 2hqs_A Protein TOLB; TOLB, PAL 46.5 1.6E+02 0.0054 26.2 23.1 181 115-325 203-394 (415)
213 2bkl_A Prolyl endopeptidase; m 46.3 2.1E+02 0.0071 27.5 22.4 122 186-325 277-404 (695)
214 3p5b_L Low density lipoprotein 46.1 1.6E+02 0.0055 26.1 22.4 111 189-325 169-284 (400)
215 1evh_A WH1 domain, protein (ME 45.8 53 0.0018 23.6 5.9 45 115-163 11-56 (112)
216 2hz6_A Endoplasmic reticulum t 45.2 3.2 0.00011 37.0 -0.9 29 186-223 5-35 (369)
217 3odt_A Protein DOA1; ubiquitin 45.2 1.3E+02 0.0043 24.7 22.2 109 186-322 109-218 (313)
218 1yfq_A Cell cycle arrest prote 45.1 1.4E+02 0.0046 25.0 12.1 72 243-324 22-95 (342)
219 3hxj_A Pyrrolo-quinoline quino 44.9 1.3E+02 0.0043 25.2 9.5 15 210-224 236-250 (330)
220 2kwv_A RAD30 homolog B, DNA po 44.9 11 0.00036 22.3 1.5 17 6-22 22-38 (48)
221 2qe8_A Uncharacterized protein 43.7 1.2E+02 0.0041 26.0 9.3 58 190-251 77-139 (343)
222 2ymu_A WD-40 repeat protein; u 43.6 1.9E+02 0.0067 26.4 26.0 97 209-324 448-545 (577)
223 1egx_A VAsp, vasodilator-stimu 43.5 41 0.0014 24.4 5.0 41 116-161 12-55 (115)
224 3k26_A Polycomb protein EED; W 42.9 1.5E+02 0.0051 24.9 20.6 70 244-320 241-320 (366)
225 3sfz_A APAF-1, apoptotic pepti 41.4 3.1E+02 0.011 28.2 24.3 98 209-324 723-834 (1249)
226 3gre_A Serine/threonine-protei 40.9 1.6E+02 0.0053 25.9 9.8 68 243-323 181-250 (437)
227 3tc9_A Hypothetical hydrolase; 40.9 2E+02 0.0069 25.8 15.2 47 99-147 234-280 (430)
228 1pjx_A Dfpase, DIISOPROPYLFLUO 40.6 1.5E+02 0.0053 24.4 21.3 96 209-319 198-300 (314)
229 3lrv_A PRE-mRNA-splicing facto 39.2 1.8E+02 0.006 24.7 19.9 196 96-323 88-299 (343)
230 2xyi_A Probable histone-bindin 39.0 2E+02 0.007 25.3 12.0 66 243-318 243-309 (430)
231 3v7d_B Cell division control p 37.0 2.2E+02 0.0076 25.2 26.7 94 209-322 290-385 (464)
232 1jmx_B Amine dehydrogenase; ox 36.0 1.9E+02 0.0065 24.1 20.6 27 100-128 8-34 (349)
233 1mda_H Methylamine dehydrogena 35.6 2.1E+02 0.007 25.3 9.4 51 274-328 304-357 (368)
234 2w18_A PALB2, fancn, partner a 34.2 2.4E+02 0.0082 24.9 9.4 34 244-284 53-86 (356)
235 3sov_A LRP-6, low-density lipo 33.1 2.3E+02 0.0078 24.2 16.0 112 189-324 89-203 (318)
236 3iuj_A Prolyl endopeptidase; h 32.6 3.4E+02 0.012 26.0 14.9 114 190-325 291-412 (693)
237 2vdu_B TRNA (guanine-N(7)-)-me 31.8 2.7E+02 0.0093 24.6 22.5 72 244-323 319-398 (450)
238 4ery_A WD repeat-containing pr 31.0 2.2E+02 0.0076 23.4 24.0 97 209-323 171-273 (312)
239 3dw8_B Serine/threonine-protei 31.0 2E+02 0.0068 25.1 8.8 73 243-322 39-130 (447)
240 1ddw_A GLGF-domain protein hom 30.9 1E+02 0.0035 22.4 5.4 37 115-157 11-48 (120)
241 3s94_A LRP-6, low-density lipo 30.6 3.6E+02 0.012 25.7 23.6 110 189-324 402-516 (619)
242 3dm0_A Maltose-binding peripla 30.3 3.6E+02 0.012 25.6 21.7 96 209-323 541-637 (694)
243 2z3z_A Dipeptidyl aminopeptida 30.1 3.6E+02 0.012 25.5 20.3 110 208-324 234-350 (706)
244 1sq9_A Antiviral protein SKI8; 29.7 2.6E+02 0.009 23.8 23.4 56 258-322 207-271 (397)
245 2w18_A PALB2, fancn, partner a 29.2 3E+02 0.01 24.3 17.7 92 209-316 260-355 (356)
246 1pby_B Quinohemoprotein amine 28.7 2.5E+02 0.0084 23.1 14.2 102 209-323 11-129 (337)
247 1erj_A Transcriptional repress 28.5 2.9E+02 0.0099 23.9 20.3 92 209-319 187-288 (393)
248 2be1_A Serine/threonine-protei 28.2 1.7E+02 0.0059 25.5 7.5 24 189-221 110-133 (339)
249 3ott_A Two-component system se 27.9 4.2E+02 0.014 25.6 13.4 96 210-324 83-180 (758)
250 2xbg_A YCF48-like protein; pho 27.6 2.8E+02 0.0097 23.5 15.8 101 210-325 57-158 (327)
251 3ott_A Two-component system se 26.7 4.4E+02 0.015 25.4 21.6 188 97-324 68-266 (758)
252 2oit_A Nucleoporin 214KDA; NH2 26.3 3.3E+02 0.011 24.3 9.4 68 244-324 162-229 (434)
253 2dk7_A Transcription elongatio 26.0 48 0.0016 21.8 2.5 19 113-131 28-46 (73)
254 2ece_A 462AA long hypothetical 25.8 3.9E+02 0.013 24.5 11.0 110 207-326 226-361 (462)
255 3s94_A LRP-6, low-density lipo 25.8 4.3E+02 0.015 25.1 20.9 111 190-324 95-208 (619)
256 2pbi_B Guanine nucleotide-bind 24.7 3.2E+02 0.011 23.2 23.7 97 209-321 176-274 (354)
257 1ugj_A Riken cDNA 2310057J16 p 24.3 1.9E+02 0.0064 21.7 5.9 29 105-133 58-86 (141)
258 1jof_A Carboxy-CIS,CIS-muconat 23.7 3.4E+02 0.012 23.1 14.3 106 209-323 167-297 (365)
259 3kya_A Putative phosphatase; s 23.3 4.5E+02 0.015 24.3 12.6 114 186-317 143-277 (496)
260 3amr_A 3-phytase; beta-propell 23.3 3.8E+02 0.013 23.5 17.4 99 209-317 99-209 (355)
261 3iuj_A Prolyl endopeptidase; h 23.1 5E+02 0.017 24.8 15.0 122 188-327 242-368 (693)
262 3o4h_A Acylamino-acid-releasin 22.7 4.5E+02 0.015 24.1 15.3 112 186-322 116-231 (582)
263 1qks_A Cytochrome CD1 nitrite 20.6 5.3E+02 0.018 24.1 18.9 121 187-319 349-478 (567)
264 3azo_A Aminopeptidase; POP fam 20.6 5.2E+02 0.018 24.1 19.9 118 190-325 252-376 (662)
265 2jp2_A Spred-2, sprouty-relate 20.3 1.1E+02 0.0038 22.4 3.9 44 115-163 20-69 (126)
266 2qe8_A Uncharacterized protein 20.1 4E+02 0.014 22.5 9.4 119 190-324 27-160 (343)
No 1
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.59 E-value=1.2e-12 Score=117.89 Aligned_cols=232 Identities=9% Similarity=0.086 Sum_probs=150.4
Q ss_pred eeeeccCCcccccCCCCCCCCCCCCeEEEeeeCceEEEeecCC---------CCceEEEEcCCcccEEecCCCCCCCce-
Q 018497 70 LGFYSTKCKEFEDLCDPPFRTQLADLDVVGSCNGVLCFCSNGS---------DRSLIYLWNPLIKKYMTLPRPSLNPRY- 139 (355)
Q Consensus 70 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~s~~GLl~l~~~~~---------~~~~~~V~NP~T~~~~~LP~~~~~~~~- 139 (355)
...|++....|...+.+... ......++..+|.|++.++.. ....++++||.|++|..+|+++..+..
T Consensus 26 ~~~yd~~~~~W~~~~~~~~~--~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~ 103 (318)
T 2woz_A 26 AVAYDPMENECYLTALAEQI--PRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLF 103 (318)
T ss_dssp EEEEETTTTEEEEEEECTTS--CSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSC
T ss_pred eEEECCCCCceecccCCccC--CccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCcccccc
Confidence 35788888888764433221 223344555677766554310 012388999999999999987766422
Q ss_pred ---------eEEE-EecCCCCCCcEEEE--EEcCCCceeEeccCCCceeeeccccccceeEeCceEEEEEeeeccCCCCC
Q 018497 140 ---------LGFG-VNSVSGHLDDFKVV--YSLRSNSWKNIAYGFPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSC 207 (355)
Q Consensus 140 ---------~~~g-~d~~~~~~~~ykvv--yss~t~~W~~~~~~~p~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~ 207 (355)
+.+| .+... .....-+ ||..+++|+.++ .+|....... .+.++|++|.+++.. .+...
T Consensus 104 ~~~~~~~~iyv~GG~~~~~--~~~~~~~~~yd~~~~~W~~~~-~~p~~r~~~~-----~~~~~~~iyv~GG~~--~~~~~ 173 (318)
T 2woz_A 104 GLGEVDDKIYVVAGKDLQT--EASLDSVLCYDPVAAKWSEVK-NLPIKVYGHN-----VISHNGMIYCLGGKT--DDKKC 173 (318)
T ss_dssp EEEEETTEEEEEEEEBTTT--CCEEEEEEEEETTTTEEEEEC-CCSSCEESCE-----EEEETTEEEEECCEE--SSSCB
T ss_pred ceEEECCEEEEEcCccCCC--CcccceEEEEeCCCCCEeECC-CCCCcccccE-----EEEECCEEEEEcCCC--CCCCc
Confidence 3333 33210 1122222 999999999998 7776654332 678999999998764 11223
Q ss_pred CcEEEEEEcCCceeeEe-cCCCCCCCCCCceEEEEECCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCce
Q 018497 208 PWLIVSFDFAKEIFQTV-MMPYDLSTDDADKYLNVFDGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRI 286 (355)
Q Consensus 208 ~~~Il~fD~~~~~~~~i-~lP~~~~~~~~~~~L~~~~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~ 286 (355)
...+..||+.+++|+.+ ++| ..+ .....+..+|+|+++++.... ...-.+|.++-. +..|+++..++....
T Consensus 174 ~~~~~~yd~~~~~W~~~~~~p-~~r---~~~~~~~~~~~iyv~GG~~~~-~~~~~~~~yd~~--~~~W~~~~~~p~~r~- 245 (318)
T 2woz_A 174 TNRVFIYNPKKGDWKDLAPMK-TPR---SMFGVAIHKGKIVIAGGVTED-GLSASVEAFDLK--TNKWEVMTEFPQERS- 245 (318)
T ss_dssp CCCEEEEETTTTEEEEECCCS-SCC---BSCEEEEETTEEEEEEEEETT-EEEEEEEEEETT--TCCEEECCCCSSCCB-
T ss_pred cceEEEEcCCCCEEEECCCCC-CCc---ccceEEEECCEEEEEcCcCCC-CccceEEEEECC--CCeEEECCCCCCccc-
Confidence 45799999999999998 666 444 345677889999999986542 123457777642 467999876665442
Q ss_pred eEeEEEeeCCcEEEEEEeeCC-------------ceEEEEEeCCCCeEEEE
Q 018497 287 WWPLGFTERGKIFIRGECRHG-------------GYGLLVYNPHSDTFKCI 324 (355)
Q Consensus 287 ~~~~~~~~~g~i~~~~~~~~~-------------~~~l~~yd~~t~~~~~v 324 (355)
...++..+++||+. ...+ ...+..||+++++|+++
T Consensus 246 -~~~~~~~~~~i~v~--GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 293 (318)
T 2woz_A 246 -SISLVSLAGSLYAI--GGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM 293 (318)
T ss_dssp -SCEEEEETTEEEEE--CCBCCBC----CCBCCBCCCEEEEETTTTEEEEE
T ss_pred -ceEEEEECCEEEEE--CCeeccCCCCceeccceeeeEEEEeCCCCEehhh
Confidence 22233446788888 3111 12599999999999998
No 2
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.59 E-value=1.5e-12 Score=116.35 Aligned_cols=242 Identities=12% Similarity=0.061 Sum_probs=154.4
Q ss_pred cEEEeecCCCCceeeeccCCcccccCCCCCCCCCCCCeEEEeeeCceEEEeecC--CCCceEEEEcCCcccEEecCCCCC
Q 018497 58 PLLFRHGISPSYLGFYSTKCKEFEDLCDPPFRTQLADLDVVGSCNGVLCFCSNG--SDRSLIYLWNPLIKKYMTLPRPSL 135 (355)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~s~~GLl~l~~~~--~~~~~~~V~NP~T~~~~~LP~~~~ 135 (355)
.+++...........|++....|..++....+ ......+..+|.|++..+. .....+.++||.|++|..+|+++.
T Consensus 14 l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~---r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~ 90 (306)
T 3ii7_A 14 RIALFGGSQPQSCRYFNPKDYSWTDIRCPFEK---RRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPT 90 (306)
T ss_dssp EEEEECCSSTTSEEEEETTTTEEEECCCCSCC---CBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSS
T ss_pred EEEEeCCCCCceEEEecCCCCCEecCCCCCcc---cceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCc
Confidence 34444433233345788888888877532221 1223344457776555431 134678999999999999998876
Q ss_pred CCce----------eEEE-EecCCCCCCcE-EEE-EEcCCCceeEeccCCCceeeeccccccceeEeCceEEEEEeeecc
Q 018497 136 NPRY----------LGFG-VNSVSGHLDDF-KVV-YSLRSNSWKNIAYGFPRSIEINRSHINSSVFLNGSVHWCARFSCY 202 (355)
Q Consensus 136 ~~~~----------~~~g-~d~~~~~~~~y-kvv-yss~t~~W~~~~~~~p~~~~~~~~~~~~~v~~~G~lyw~~~~~~~ 202 (355)
.+.. +.+| ++.. .... .+. ||..+++|+.++ .+|....... .+.++|++|.+++..
T Consensus 91 ~r~~~~~~~~~~~iyv~GG~~~~---~~~~~~~~~~d~~~~~W~~~~-~~p~~r~~~~-----~~~~~~~iyv~GG~~-- 159 (306)
T 3ii7_A 91 PRDSLAACAAEGKIYTSGGSEVG---NSALYLFECYDTRTESWHTKP-SMLTQRCSHG-----MVEANGLIYVCGGSL-- 159 (306)
T ss_dssp CCBSCEEEEETTEEEEECCBBTT---BSCCCCEEEEETTTTEEEEEC-CCSSCCBSCE-----EEEETTEEEEECCEE--
T ss_pred cccceeEEEECCEEEEECCCCCC---CcEeeeEEEEeCCCCceEeCC-CCcCCcceeE-----EEEECCEEEEECCCC--
Confidence 6432 2222 2211 1111 122 999999999998 7776543322 678999999998765
Q ss_pred CCCCC----CcEEEEEEcCCceeeEe-cCCCCCCCCCCceEEEEECCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEE
Q 018497 203 HDNSC----PWLIVSFDFAKEIFQTV-MMPYDLSTDDADKYLNVFDGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKL 277 (355)
Q Consensus 203 ~~~~~----~~~Il~fD~~~~~~~~i-~lP~~~~~~~~~~~L~~~~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~ 277 (355)
. ... ...+.+||+.+++|+.+ ++| ..+ ....++..+|+|+++++.... ...-.+|.++-. ...|..+
T Consensus 160 ~-~~~~~~~~~~~~~yd~~~~~W~~~~~~p-~~r---~~~~~~~~~~~i~v~GG~~~~-~~~~~~~~yd~~--~~~W~~~ 231 (306)
T 3ii7_A 160 G-NNVSGRVLNSCEVYDPATETWTELCPMI-EAR---KNHGLVFVKDKIFAVGGQNGL-GGLDNVEYYDIK--LNEWKMV 231 (306)
T ss_dssp S-CTTTCEECCCEEEEETTTTEEEEECCCS-SCC---BSCEEEEETTEEEEECCEETT-EEBCCEEEEETT--TTEEEEC
T ss_pred C-CCCcccccceEEEeCCCCCeEEECCCcc-chh---hcceEEEECCEEEEEeCCCCC-CCCceEEEeeCC--CCcEEEC
Confidence 1 112 56799999999999999 666 444 355677889999999876441 112346776642 3679988
Q ss_pred EEecCCCceeEeEEEeeCCcEEEEEEeeCC----ceEEEEEeCCCCeEEEEE
Q 018497 278 YTIEKPQRIWWPLGFTERGKIFIRGECRHG----GYGLLVYNPHSDTFKCIG 325 (355)
Q Consensus 278 ~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~----~~~l~~yd~~t~~~~~v~ 325 (355)
..++... ....++..++.||+. ...+ ...+..||+++++|+.+.
T Consensus 232 ~~~p~~r--~~~~~~~~~~~i~v~--GG~~~~~~~~~~~~yd~~~~~W~~~~ 279 (306)
T 3ii7_A 232 SPMPWKG--VTVKCAAVGSIVYVL--AGFQGVGRLGHILEYNTETDKWVANS 279 (306)
T ss_dssp CCCSCCB--SCCEEEEETTEEEEE--ECBCSSSBCCEEEEEETTTTEEEEEE
T ss_pred CCCCCCc--cceeEEEECCEEEEE--eCcCCCeeeeeEEEEcCCCCeEEeCC
Confidence 7665543 222333346788888 3211 126999999999999984
No 3
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.59 E-value=1e-12 Score=118.11 Aligned_cols=235 Identities=12% Similarity=0.066 Sum_probs=149.8
Q ss_pred eeeeccCCcccccCCCCCCCCCCCCeEEEeeeCceEEEeecC-----CC----CceEEEEcCCcccEEecCCCCCCCce-
Q 018497 70 LGFYSTKCKEFEDLCDPPFRTQLADLDVVGSCNGVLCFCSNG-----SD----RSLIYLWNPLIKKYMTLPRPSLNPRY- 139 (355)
Q Consensus 70 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~s~~GLl~l~~~~-----~~----~~~~~V~NP~T~~~~~LP~~~~~~~~- 139 (355)
...|++....|...+.|... ......++..+|.|.+..+. .. ...++++||.|++|..+|+++..+..
T Consensus 15 ~~~yd~~~~~W~~~~~~~p~--~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~ 92 (315)
T 4asc_A 15 AVAYDPAANECYCASLSSQV--PKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLF 92 (315)
T ss_dssp EEEEETTTTEEEEEECCCCS--CSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESC
T ss_pred eEEECCCCCeEecCCCCCCC--CccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhce
Confidence 35788888888653333211 22333445556666554431 11 12488999999999999988766422
Q ss_pred ---------eEEE-Eec--CCCCCCcEEEEEEcCCCceeEeccCCCceeeeccccccceeEeCceEEEEEeeeccCCCCC
Q 018497 140 ---------LGFG-VNS--VSGHLDDFKVVYSLRSNSWKNIAYGFPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSC 207 (355)
Q Consensus 140 ---------~~~g-~d~--~~~~~~~ykvvyss~t~~W~~~~~~~p~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~ 207 (355)
+.+| .+. .....++..+ ||..+++|+.++ .+|....... .+.++|++|.+++.. .+...
T Consensus 93 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~~-~d~~~~~W~~~~-~~p~~r~~~~-----~~~~~~~iyv~GG~~--~~~~~ 163 (315)
T 4asc_A 93 GLGEALNSIYVVGGREIKDGERCLDSVMC-YDRLSFKWGESD-PLPYVVYGHT-----VLSHMDLVYVIGGKG--SDRKC 163 (315)
T ss_dssp EEEEETTEEEEECCEESSTTCCBCCCEEE-EETTTTEEEECC-CCSSCCBSCE-----EEEETTEEEEECCBC--TTSCB
T ss_pred eEEEECCEEEEEeCCcCCCCCcccceEEE-ECCCCCcEeECC-CCCCccccee-----EEEECCEEEEEeCCC--CCCcc
Confidence 2222 221 0000111111 999999999998 7776543322 778999999998763 12334
Q ss_pred CcEEEEEEcCCceeeEe-cCCCCCCCCCCceEEEEECCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCce
Q 018497 208 PWLIVSFDFAKEIFQTV-MMPYDLSTDDADKYLNVFDGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRI 286 (355)
Q Consensus 208 ~~~Il~fD~~~~~~~~i-~lP~~~~~~~~~~~L~~~~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~ 286 (355)
...+.+||+.+++|+.+ ++| ..+ .....+..+|+|+++++.... ...-.+|.++-. ...|+.+..++...
T Consensus 164 ~~~~~~yd~~~~~W~~~~~~p-~~r---~~~~~~~~~~~iyv~GG~~~~-~~~~~~~~yd~~--~~~W~~~~~~p~~r-- 234 (315)
T 4asc_A 164 LNKMCVYDPKKFEWKELAPMQ-TAR---SLFGATVHDGRIIVAAGVTDT-GLTSSAEVYSIT--DNKWAPFEAFPQER-- 234 (315)
T ss_dssp CCCEEEEETTTTEEEECCCCS-SCC---BSCEEEEETTEEEEEEEECSS-SEEEEEEEEETT--TTEEEEECCCSSCC--
T ss_pred cceEEEEeCCCCeEEECCCCC-Cch---hceEEEEECCEEEEEeccCCC-CccceEEEEECC--CCeEEECCCCCCcc--
Confidence 56799999999999998 666 544 345677889999999987652 124467777652 46899987665544
Q ss_pred eEeEEEeeCCcEEEEEEeeC----C-------ceEEEEEeCCCCeEEEE
Q 018497 287 WWPLGFTERGKIFIRGECRH----G-------GYGLLVYNPHSDTFKCI 324 (355)
Q Consensus 287 ~~~~~~~~~g~i~~~~~~~~----~-------~~~l~~yd~~t~~~~~v 324 (355)
....++..+++||+.|-... + ...+..||+++++|+.+
T Consensus 235 ~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 283 (315)
T 4asc_A 235 SSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGV 283 (315)
T ss_dssp BSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEE
T ss_pred cceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhh
Confidence 22233344678888831100 0 12589999999999999
No 4
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.55 E-value=3e-12 Score=114.23 Aligned_cols=229 Identities=12% Similarity=0.202 Sum_probs=147.6
Q ss_pred eeeccCCcccccCCCCCCCCCCCCeEEEeeeCceEEEeecC---CCCceEEEEcCCcccEEecCCCCCCCce--------
Q 018497 71 GFYSTKCKEFEDLCDPPFRTQLADLDVVGSCNGVLCFCSNG---SDRSLIYLWNPLIKKYMTLPRPSLNPRY-------- 139 (355)
Q Consensus 71 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~s~~GLl~l~~~~---~~~~~~~V~NP~T~~~~~LP~~~~~~~~-------- 139 (355)
..|++....|..+.....+ .....+...+|.|++..+. .....+.++||.|++|..+|+++..+..
T Consensus 33 ~~~d~~~~~W~~~~~~p~~---r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~ 109 (302)
T 2xn4_A 33 ECYDFKEERWHQVAELPSR---RCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVLNG 109 (302)
T ss_dssp EEEETTTTEEEEECCCSSC---CBSCEEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETT
T ss_pred EEEcCcCCcEeEcccCCcc---cccceEEEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEECC
Confidence 4677777777766421111 1222334457776655431 1235789999999999999988766432
Q ss_pred --eEEE-EecCCCCCCcEE-EE-EEcCCCceeEeccCCCceeeeccccccceeEeCceEEEEEeeeccCCC-CCCcEEEE
Q 018497 140 --LGFG-VNSVSGHLDDFK-VV-YSLRSNSWKNIAYGFPRSIEINRSHINSSVFLNGSVHWCARFSCYHDN-SCPWLIVS 213 (355)
Q Consensus 140 --~~~g-~d~~~~~~~~yk-vv-yss~t~~W~~~~~~~p~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~-~~~~~Il~ 213 (355)
+.+| ++. ..... +. ||..+++|+.++ .+|....... .+.++|++|.+++.. ... .....+..
T Consensus 110 ~iyv~GG~~~----~~~~~~~~~~d~~~~~W~~~~-~~p~~r~~~~-----~~~~~~~iyv~GG~~--~~~~~~~~~~~~ 177 (302)
T 2xn4_A 110 LLYAVGGFDG----STGLSSVEAYNIKSNEWFHVA-PMNTRRSSVG-----VGVVGGLLYAVGGYD--VASRQCLSTVEC 177 (302)
T ss_dssp EEEEEEEECS----SCEEEEEEEEETTTTEEEEEC-CCSSCCBSCE-----EEEETTEEEEECCEE--TTTTEECCCEEE
T ss_pred EEEEEcCCCC----CccCceEEEEeCCCCeEeecC-CCCCcccCce-----EEEECCEEEEEeCCC--CCCCccccEEEE
Confidence 2333 332 11222 22 999999999998 7775543322 678999999998765 100 11456999
Q ss_pred EEcCCceeeEe-cCCCCCCCCCCceEEEEECCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEeEEE
Q 018497 214 FDFAKEIFQTV-MMPYDLSTDDADKYLNVFDGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGF 292 (355)
Q Consensus 214 fD~~~~~~~~i-~lP~~~~~~~~~~~L~~~~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~ 292 (355)
||+.+++|+.+ ++| ..+ ....++..+|+|+++++.... ...-.+|.++-. ...|+.+..++.... ....+
T Consensus 178 yd~~~~~W~~~~~~p-~~r---~~~~~~~~~~~iyv~GG~~~~-~~~~~~~~yd~~--~~~W~~~~~~~~~r~--~~~~~ 248 (302)
T 2xn4_A 178 YNATTNEWTYIAEMS-TRR---SGAGVGVLNNLLYAVGGHDGP-LVRKSVEVYDPT--TNAWRQVADMNMCRR--NAGVC 248 (302)
T ss_dssp EETTTTEEEEECCCS-SCC---BSCEEEEETTEEEEECCBSSS-SBCCCEEEEETT--TTEEEEECCCSSCCB--SCEEE
T ss_pred EeCCCCcEEECCCCc-ccc---ccccEEEECCEEEEECCCCCC-cccceEEEEeCC--CCCEeeCCCCCCccc--cCeEE
Confidence 99999999998 666 444 345677889999999876542 112346777642 367999876665442 22233
Q ss_pred eeCCcEEEEEEeeCCc----eEEEEEeCCCCeEEEEE
Q 018497 293 TERGKIFIRGECRHGG----YGLLVYNPHSDTFKCIG 325 (355)
Q Consensus 293 ~~~g~i~~~~~~~~~~----~~l~~yd~~t~~~~~v~ 325 (355)
..+++||+. ...++ ..+..||+++++|+.+.
T Consensus 249 ~~~~~i~v~--GG~~~~~~~~~v~~yd~~~~~W~~~~ 283 (302)
T 2xn4_A 249 AVNGLLYVV--GGDDGSCNLASVEYYNPTTDKWTVVS 283 (302)
T ss_dssp EETTEEEEE--CCBCSSSBCCCEEEEETTTTEEEECS
T ss_pred EECCEEEEE--CCcCCCcccccEEEEcCCCCeEEECC
Confidence 346788888 32221 25999999999999884
No 5
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.55 E-value=2.7e-12 Score=114.98 Aligned_cols=231 Identities=13% Similarity=0.134 Sum_probs=147.6
Q ss_pred eeeeccCCcccccCCCCCCCCCCCCeEEEeeeCceEEEeecC-------CCCceEEEEcCCcccEEecCCCCCCCce---
Q 018497 70 LGFYSTKCKEFEDLCDPPFRTQLADLDVVGSCNGVLCFCSNG-------SDRSLIYLWNPLIKKYMTLPRPSLNPRY--- 139 (355)
Q Consensus 70 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~s~~GLl~l~~~~-------~~~~~~~V~NP~T~~~~~LP~~~~~~~~--- 139 (355)
...|++....|..++....+ .....++..+|.|++..+. .....++++||.|++|..+|+++..+..
T Consensus 41 ~~~~d~~~~~W~~~~~~p~~---r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~ 117 (308)
T 1zgk_A 41 LEAYNPSNGTWLRLADLQVP---RSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGV 117 (308)
T ss_dssp EEEEETTTTEEEECCCCSSC---CBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEE
T ss_pred EEEEcCCCCeEeECCCCCcc---cccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEE
Confidence 35678887888776422111 1222334556776655421 1134689999999999999988776532
Q ss_pred -------eEEE-EecCCCCCCcEEEE-EEcCCCceeEeccCCCceeeeccccccceeEeCceEEEEEeeeccCCCCCCcE
Q 018497 140 -------LGFG-VNSVSGHLDDFKVV-YSLRSNSWKNIAYGFPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWL 210 (355)
Q Consensus 140 -------~~~g-~d~~~~~~~~ykvv-yss~t~~W~~~~~~~p~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~~~ 210 (355)
+.+| ++.. ...-.+. ||..+++|+.++ .+|....... .+.++|.+|.+++.. +......
T Consensus 118 ~~~~~~iyv~GG~~~~---~~~~~~~~yd~~~~~W~~~~-~~p~~r~~~~-----~~~~~~~iyv~GG~~---~~~~~~~ 185 (308)
T 1zgk_A 118 GVIDGHIYAVGGSHGC---IHHNSVERYEPERDEWHLVA-PMLTRRIGVG-----VAVLNRLLYAVGGFD---GTNRLNS 185 (308)
T ss_dssp EEETTEEEEECCEETT---EECCCEEEEETTTTEEEECC-CCSSCCBSCE-----EEEETTEEEEECCBC---SSCBCCC
T ss_pred EEECCEEEEEcCCCCC---cccccEEEECCCCCeEeECC-CCCccccceE-----EEEECCEEEEEeCCC---CCCcCce
Confidence 2221 1211 1000111 999999999998 6775543322 678899999998754 1222467
Q ss_pred EEEEEcCCceeeEe-cCCCCCCCCCCceEEEEECCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEe
Q 018497 211 IVSFDFAKEIFQTV-MMPYDLSTDDADKYLNVFDGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWP 289 (355)
Q Consensus 211 Il~fD~~~~~~~~i-~lP~~~~~~~~~~~L~~~~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~ 289 (355)
+..||+.+++|+.+ ++| ..+ .....+..+|+|+++++.... ...-.+|.++-. ...|+++..++.... ..
T Consensus 186 ~~~yd~~~~~W~~~~~~p-~~r---~~~~~~~~~~~iyv~GG~~~~-~~~~~v~~yd~~--~~~W~~~~~~p~~r~--~~ 256 (308)
T 1zgk_A 186 AECYYPERNEWRMITAMN-TIR---SGAGVCVLHNCIYAAGGYDGQ-DQLNSVERYDVE--TETWTFVAPMKHRRS--AL 256 (308)
T ss_dssp EEEEETTTTEEEECCCCS-SCC---BSCEEEEETTEEEEECCBCSS-SBCCCEEEEETT--TTEEEECCCCSSCCB--SC
T ss_pred EEEEeCCCCeEeeCCCCC-Ccc---ccceEEEECCEEEEEeCCCCC-CccceEEEEeCC--CCcEEECCCCCCCcc--ce
Confidence 99999999999998 566 444 345677789999999876541 123456776642 367998876655442 22
Q ss_pred EEEeeCCcEEEEEEeeCC----ceEEEEEeCCCCeEEEEEE
Q 018497 290 LGFTERGKIFIRGECRHG----GYGLLVYNPHSDTFKCIGV 326 (355)
Q Consensus 290 ~~~~~~g~i~~~~~~~~~----~~~l~~yd~~t~~~~~v~~ 326 (355)
.++..+++||+. ...+ ...+..||+++++|+.+.-
T Consensus 257 ~~~~~~~~i~v~--GG~~~~~~~~~v~~yd~~~~~W~~~~~ 295 (308)
T 1zgk_A 257 GITVHQGRIYVL--GGYDGHTFLDSVECYDPDTDTWSEVTR 295 (308)
T ss_dssp EEEEETTEEEEE--CCBCSSCBCCEEEEEETTTTEEEEEEE
T ss_pred EEEEECCEEEEE--cCcCCCcccceEEEEcCCCCEEeecCC
Confidence 233346788888 3211 1269999999999999843
No 6
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.54 E-value=7.2e-12 Score=111.65 Aligned_cols=230 Identities=12% Similarity=0.151 Sum_probs=147.3
Q ss_pred eeeeccCCcccccCCCCCCCCCCCCeEEEeeeCceEEEeecC---CCCceEEEEcCCccc---EEecCCCCCCCce----
Q 018497 70 LGFYSTKCKEFEDLCDPPFRTQLADLDVVGSCNGVLCFCSNG---SDRSLIYLWNPLIKK---YMTLPRPSLNPRY---- 139 (355)
Q Consensus 70 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~s~~GLl~l~~~~---~~~~~~~V~NP~T~~---~~~LP~~~~~~~~---- 139 (355)
...|++....|..++.... .......+..+|.|++..+. .....++++||.|++ |..+++++..+..
T Consensus 33 ~~~~d~~~~~W~~~~~~p~---~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~ 109 (301)
T 2vpj_A 33 VEKYDPKTQEWSFLPSITR---KRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGAT 109 (301)
T ss_dssp EEEEETTTTEEEECCCCSS---CCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEE
T ss_pred EEEEcCCCCeEEeCCCCCh---hhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEE
Confidence 3467777777877652111 11223334456666555421 123578999999999 9999988766532
Q ss_pred ------eEEE-EecCCCCCCcEEEE-EEcCCCceeEeccCCCceeeeccccccceeEeCceEEEEEeeeccCCCCCCcEE
Q 018497 140 ------LGFG-VNSVSGHLDDFKVV-YSLRSNSWKNIAYGFPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLI 211 (355)
Q Consensus 140 ------~~~g-~d~~~~~~~~ykvv-yss~t~~W~~~~~~~p~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~~~I 211 (355)
+.+| ++.. ...-.+. ||..+++|+.++ .+|....... .+.++|.+|.+++.. +......+
T Consensus 110 ~~~~~lyv~GG~~~~---~~~~~~~~~d~~~~~W~~~~-~~p~~r~~~~-----~~~~~~~iyv~GG~~---~~~~~~~~ 177 (301)
T 2vpj_A 110 TLGDMIYVSGGFDGS---RRHTSMERYDPNIDQWSMLG-DMQTAREGAG-----LVVASGVIYCLGGYD---GLNILNSV 177 (301)
T ss_dssp EETTEEEEECCBCSS---CBCCEEEEEETTTTEEEEEE-ECSSCCBSCE-----EEEETTEEEEECCBC---SSCBCCCE
T ss_pred EECCEEEEEcccCCC---cccceEEEEcCCCCeEEECC-CCCCCcccce-----EEEECCEEEEECCCC---CCcccceE
Confidence 2222 2211 1111222 999999999998 6775443222 678899999998754 12234679
Q ss_pred EEEEcCCceeeEe-cCCCCCCCCCCceEEEEECCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEeE
Q 018497 212 VSFDFAKEIFQTV-MMPYDLSTDDADKYLNVFDGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPL 290 (355)
Q Consensus 212 l~fD~~~~~~~~i-~lP~~~~~~~~~~~L~~~~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~ 290 (355)
.+||+.+++|+.+ ++| ..+ ....++..+|+|+++++..... ..-.+|.++-. +..|.++..++.... ...
T Consensus 178 ~~~d~~~~~W~~~~~~p-~~r---~~~~~~~~~~~i~v~GG~~~~~-~~~~v~~yd~~--~~~W~~~~~~p~~r~--~~~ 248 (301)
T 2vpj_A 178 EKYDPHTGHWTNVTPMA-TKR---SGAGVALLNDHIYVVGGFDGTA-HLSSVEAYNIR--TDSWTTVTSMTTPRC--YVG 248 (301)
T ss_dssp EEEETTTTEEEEECCCS-SCC---BSCEEEEETTEEEEECCBCSSS-BCCCEEEEETT--TTEEEEECCCSSCCB--SCE
T ss_pred EEEeCCCCcEEeCCCCC-ccc---ccceEEEECCEEEEEeCCCCCc-ccceEEEEeCC--CCcEEECCCCCCccc--cee
Confidence 9999999999998 566 444 3456778899999998865421 13346666542 367999876665442 222
Q ss_pred EEeeCCcEEEEEEeeCCc----eEEEEEeCCCCeEEEEE
Q 018497 291 GFTERGKIFIRGECRHGG----YGLLVYNPHSDTFKCIG 325 (355)
Q Consensus 291 ~~~~~g~i~~~~~~~~~~----~~l~~yd~~t~~~~~v~ 325 (355)
++..+++||+. ...+. ..+..||+++++|+.+.
T Consensus 249 ~~~~~~~i~v~--GG~~~~~~~~~v~~yd~~~~~W~~~~ 285 (301)
T 2vpj_A 249 ATVLRGRLYAI--AGYDGNSLLSSIECYDPIIDSWEVVT 285 (301)
T ss_dssp EEEETTEEEEE--CCBCSSSBEEEEEEEETTTTEEEEEE
T ss_pred EEEECCEEEEE--cCcCCCcccccEEEEcCCCCeEEEcC
Confidence 33346788888 32221 26999999999999884
No 7
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.44 E-value=1.5e-11 Score=109.96 Aligned_cols=192 Identities=17% Similarity=0.161 Sum_probs=128.0
Q ss_pred CceEEEEcCCcccEEecCCCCCCCce----------eEEE-EecCCCCCCcEEEE-EEcCCCceeEeccCCCceeeeccc
Q 018497 114 RSLIYLWNPLIKKYMTLPRPSLNPRY----------LGFG-VNSVSGHLDDFKVV-YSLRSNSWKNIAYGFPRSIEINRS 181 (355)
Q Consensus 114 ~~~~~V~NP~T~~~~~LP~~~~~~~~----------~~~g-~d~~~~~~~~ykvv-yss~t~~W~~~~~~~p~~~~~~~~ 181 (355)
...+.++||.+++|..+++++..+.. +.+| .+ . ...-.+. ||..+++|+.++ .+|.......
T Consensus 23 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~-~---~~~~~~~~~d~~~~~W~~~~-~~p~~r~~~~- 96 (306)
T 3ii7_A 23 PQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQ-L---FPIKRMDCYNVVKDSWYSKL-GPPTPRDSLA- 96 (306)
T ss_dssp TTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBS-S---SBCCEEEEEETTTTEEEEEE-CCSSCCBSCE-
T ss_pred CceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCC-C---CCcceEEEEeCCCCeEEECC-CCCcccccee-
Confidence 56789999999999999988776532 2221 11 1 1111222 999999999998 7775543322
Q ss_pred cccceeEeCceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEe-cCCCCCCCCCCceEEEEECCeEEEEEecCCCCcc--
Q 018497 182 HINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTV-MMPYDLSTDDADKYLNVFDGYLCVFATIPNNTFR-- 258 (355)
Q Consensus 182 ~~~~~v~~~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i-~lP~~~~~~~~~~~L~~~~G~L~~v~~~~~~~~~-- 258 (355)
.+.++|.+|.+++.. .+......+..||+.+++|+.+ ++| ..+ .....+..+|+|+++++.......
T Consensus 97 ----~~~~~~~iyv~GG~~--~~~~~~~~~~~~d~~~~~W~~~~~~p-~~r---~~~~~~~~~~~iyv~GG~~~~~~~~~ 166 (306)
T 3ii7_A 97 ----ACAAEGKIYTSGGSE--VGNSALYLFECYDTRTESWHTKPSML-TQR---CSHGMVEANGLIYVCGGSLGNNVSGR 166 (306)
T ss_dssp ----EEEETTEEEEECCBB--TTBSCCCCEEEEETTTTEEEEECCCS-SCC---BSCEEEEETTEEEEECCEESCTTTCE
T ss_pred ----EEEECCEEEEECCCC--CCCcEeeeEEEEeCCCCceEeCCCCc-CCc---ceeEEEEECCEEEEECCCCCCCCccc
Confidence 678899999998754 2233456799999999999998 666 544 345677889999999876432110
Q ss_pred -EEEEEEeccCCCCCCeEEEEEecCCCceeEeEEEeeCCcEEEEEEeeCC--ceEEEEEeCCCCeEEEEE
Q 018497 259 -SYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHG--GYGLLVYNPHSDTFKCIG 325 (355)
Q Consensus 259 -~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~--~~~l~~yd~~t~~~~~v~ 325 (355)
.-.+|.++-. ...|+++..++... ....++..+++||+.|-.... ...+..||+++++|+.+.
T Consensus 167 ~~~~~~~yd~~--~~~W~~~~~~p~~r--~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~ 232 (306)
T 3ii7_A 167 VLNSCEVYDPA--TETWTELCPMIEAR--KNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVS 232 (306)
T ss_dssp ECCCEEEEETT--TTEEEEECCCSSCC--BSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECC
T ss_pred ccceEEEeCCC--CCeEEECCCccchh--hcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECC
Confidence 3346666642 36799987665543 222333346788888311011 125999999999999883
No 8
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.40 E-value=8.7e-11 Score=104.59 Aligned_cols=190 Identities=12% Similarity=0.151 Sum_probs=126.8
Q ss_pred CceEEEEcCCcccEEecCCCCCCCce----------eEEE-EecCCCCCCcEEEEEEcCCCc---eeEeccCCCceeeec
Q 018497 114 RSLIYLWNPLIKKYMTLPRPSLNPRY----------LGFG-VNSVSGHLDDFKVVYSLRSNS---WKNIAYGFPRSIEIN 179 (355)
Q Consensus 114 ~~~~~V~NP~T~~~~~LP~~~~~~~~----------~~~g-~d~~~~~~~~ykvvyss~t~~---W~~~~~~~p~~~~~~ 179 (355)
...++++||.|++|..+|+++..+.. +.+| .+.. ...++..+ ||..+++ |+.++ .+|......
T Consensus 30 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~-~~~~~~~~-~d~~~~~~~~W~~~~-~~p~~r~~~ 106 (301)
T 2vpj_A 30 IDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGR-SRLSSVEC-LDYTADEDGVWYSVA-PMNVRRGLA 106 (301)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSS-CBCCCEEE-EETTCCTTCCCEEEC-CCSSCCBSC
T ss_pred eeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCC-ccCceEEE-EECCCCCCCeeEECC-CCCCCccce
Confidence 45789999999999999987765432 2222 1111 00111111 9999999 99998 777654332
Q ss_pred cccccceeEeCceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEe-cCCCCCCCCCCceEEEEECCeEEEEEecCCCCcc
Q 018497 180 RSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTV-MMPYDLSTDDADKYLNVFDGYLCVFATIPNNTFR 258 (355)
Q Consensus 180 ~~~~~~~v~~~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i-~lP~~~~~~~~~~~L~~~~G~L~~v~~~~~~~~~ 258 (355)
. .+.++|++|.+++.. +......+..||+.+++|+.+ ++| ..+ .....+..+|+|+++++.... ..
T Consensus 107 ~-----~~~~~~~lyv~GG~~---~~~~~~~~~~~d~~~~~W~~~~~~p-~~r---~~~~~~~~~~~iyv~GG~~~~-~~ 173 (301)
T 2vpj_A 107 G-----ATTLGDMIYVSGGFD---GSRRHTSMERYDPNIDQWSMLGDMQ-TAR---EGAGLVVASGVIYCLGGYDGL-NI 173 (301)
T ss_dssp E-----EEEETTEEEEECCBC---SSCBCCEEEEEETTTTEEEEEEECS-SCC---BSCEEEEETTEEEEECCBCSS-CB
T ss_pred e-----EEEECCEEEEEcccC---CCcccceEEEEcCCCCeEEECCCCC-CCc---ccceEEEECCEEEEECCCCCC-cc
Confidence 2 678899999998754 122246799999999999998 666 544 345677789999999876542 12
Q ss_pred EEEEEEeccCCCCCCeEEEEEecCCCceeEeEEEeeCCcEEEEEEeeCC----ceEEEEEeCCCCeEEEEE
Q 018497 259 SYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHG----GYGLLVYNPHSDTFKCIG 325 (355)
Q Consensus 259 ~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~----~~~l~~yd~~t~~~~~v~ 325 (355)
.-.+|.++-. ...|+++..++... ....++..++.||+. ...+ ...+..||+++++|+.+.
T Consensus 174 ~~~~~~~d~~--~~~W~~~~~~p~~r--~~~~~~~~~~~i~v~--GG~~~~~~~~~v~~yd~~~~~W~~~~ 238 (301)
T 2vpj_A 174 LNSVEKYDPH--TGHWTNVTPMATKR--SGAGVALLNDHIYVV--GGFDGTAHLSSVEAYNIRTDSWTTVT 238 (301)
T ss_dssp CCCEEEEETT--TTEEEEECCCSSCC--BSCEEEEETTEEEEE--CCBCSSSBCCCEEEEETTTTEEEEEC
T ss_pred cceEEEEeCC--CCcEEeCCCCCccc--ccceEEEECCEEEEE--eCCCCCcccceEEEEeCCCCcEEECC
Confidence 3346666642 36899986665543 222333446788888 3221 125999999999999984
No 9
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.40 E-value=7.9e-11 Score=105.68 Aligned_cols=197 Identities=9% Similarity=0.071 Sum_probs=125.7
Q ss_pred ceEEEEcCCcccEEecCCCC-CCCce----------eEEE-EecC-CCCCCcE-E-EE-EEcCCCceeEeccCCCceeee
Q 018497 115 SLIYLWNPLIKKYMTLPRPS-LNPRY----------LGFG-VNSV-SGHLDDF-K-VV-YSLRSNSWKNIAYGFPRSIEI 178 (355)
Q Consensus 115 ~~~~V~NP~T~~~~~LP~~~-~~~~~----------~~~g-~d~~-~~~~~~y-k-vv-yss~t~~W~~~~~~~p~~~~~ 178 (355)
..+.++||.|++|...+.+. ..+.. +.+| +... ....... . +. ||..+++|+.++ .+|.....
T Consensus 13 ~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~-~~p~~r~~ 91 (315)
T 4asc_A 13 EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMP-PLPSPRCL 91 (315)
T ss_dssp TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECC-CBSSCEES
T ss_pred CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECC-CCCcchhc
Confidence 57899999999997632221 12211 3333 3110 0001222 1 33 999999999998 77765543
Q ss_pred ccccccceeEeCceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEe-cCCCCCCCCCCceEEEEECCeEEEEEecCCCCc
Q 018497 179 NRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTV-MMPYDLSTDDADKYLNVFDGYLCVFATIPNNTF 257 (355)
Q Consensus 179 ~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i-~lP~~~~~~~~~~~L~~~~G~L~~v~~~~~~~~ 257 (355)
.. .+.++|.+|.+++.....+......+..||+.+++|+.+ ++| ..+ .....+..+|+|+++++......
T Consensus 92 ~~-----~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p-~~r---~~~~~~~~~~~iyv~GG~~~~~~ 162 (315)
T 4asc_A 92 FG-----LGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLP-YVV---YGHTVLSHMDLVYVIGGKGSDRK 162 (315)
T ss_dssp CE-----EEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCS-SCC---BSCEEEEETTEEEEECCBCTTSC
T ss_pred ee-----EEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCC-Ccc---cceeEEEECCEEEEEeCCCCCCc
Confidence 32 778899999998854101123446799999999999998 677 544 45567789999999998733222
Q ss_pred cEEEEEEeccCCCCCCeEEEEEecCCCceeEeEEEeeCCcEEEEEEeeCC--ceEEEEEeCCCCeEEEEE
Q 018497 258 RSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHG--GYGLLVYNPHSDTFKCIG 325 (355)
Q Consensus 258 ~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~--~~~l~~yd~~t~~~~~v~ 325 (355)
..-.+|.++-. ...|+++..++... ....++..+++||+.|-.... ...+..||+++++|+.+.
T Consensus 163 ~~~~~~~yd~~--~~~W~~~~~~p~~r--~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~ 228 (315)
T 4asc_A 163 CLNKMCVYDPK--KFEWKELAPMQTAR--SLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFE 228 (315)
T ss_dssp BCCCEEEEETT--TTEEEECCCCSSCC--BSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEEC
T ss_pred ccceEEEEeCC--CCeEEECCCCCCch--hceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEECC
Confidence 33456777642 36799987665543 222333446788888311011 126999999999999984
No 10
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.36 E-value=1.1e-10 Score=103.89 Aligned_cols=190 Identities=12% Similarity=0.151 Sum_probs=126.0
Q ss_pred ceEEEEcCCcccEEecCCCCCCCce----------eEEE-EecCCCCCCcEEEEEEcCCCceeEeccCCCceeeeccccc
Q 018497 115 SLIYLWNPLIKKYMTLPRPSLNPRY----------LGFG-VNSVSGHLDDFKVVYSLRSNSWKNIAYGFPRSIEINRSHI 183 (355)
Q Consensus 115 ~~~~V~NP~T~~~~~LP~~~~~~~~----------~~~g-~d~~~~~~~~ykvvyss~t~~W~~~~~~~p~~~~~~~~~~ 183 (355)
..+.++||.+++|..+++++..+.. +.+| .+.. ...++.. +||..+++|+.++ .+|.......
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~-~~~~~~~-~~d~~~~~W~~~~-~~p~~r~~~~--- 103 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGGFNGS-LRVRTVD-SYDPVKDQWTSVA-NMRDRRSTLG--- 103 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEESCBCSS-SBCCCEE-EEETTTTEEEEEC-CCSSCCBSCE---
T ss_pred CcEEEEcCcCCcEeEcccCCcccccceEEEECCEEEEEeCcCCC-ccccceE-EECCCCCceeeCC-CCCccccceE---
Confidence 4688999999999999887766432 2221 1111 0011111 1999999999998 7776543322
Q ss_pred cceeEeCceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEe-cCCCCCCCCCCceEEEEECCeEEEEEecCCCC-ccEEE
Q 018497 184 NSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTV-MMPYDLSTDDADKYLNVFDGYLCVFATIPNNT-FRSYE 261 (355)
Q Consensus 184 ~~~v~~~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i-~lP~~~~~~~~~~~L~~~~G~L~~v~~~~~~~-~~~l~ 261 (355)
.+.++|.+|.+++.. +......+..||+.+++|+.+ ++| ..+ .....+..+|+|+++++..... ...-.
T Consensus 104 --~~~~~~~iyv~GG~~---~~~~~~~~~~~d~~~~~W~~~~~~p-~~r---~~~~~~~~~~~iyv~GG~~~~~~~~~~~ 174 (302)
T 2xn4_A 104 --AAVLNGLLYAVGGFD---GSTGLSSVEAYNIKSNEWFHVAPMN-TRR---SSVGVGVVGGLLYAVGGYDVASRQCLST 174 (302)
T ss_dssp --EEEETTEEEEEEEEC---SSCEEEEEEEEETTTTEEEEECCCS-SCC---BSCEEEEETTEEEEECCEETTTTEECCC
T ss_pred --EEEECCEEEEEcCCC---CCccCceEEEEeCCCCeEeecCCCC-Ccc---cCceEEEECCEEEEEeCCCCCCCccccE
Confidence 678899999998764 122235789999999999998 666 444 3456778899999998764321 01234
Q ss_pred EEEeccCCCCCCeEEEEEecCCCceeEeEEEeeCCcEEEEEEeeCCc----eEEEEEeCCCCeEEEEE
Q 018497 262 LWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGG----YGLLVYNPHSDTFKCIG 325 (355)
Q Consensus 262 iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~----~~l~~yd~~t~~~~~v~ 325 (355)
+|.++-. ...|+++..++... ....++..+++||+. ...++ ..+..||+++++|+.+.
T Consensus 175 ~~~yd~~--~~~W~~~~~~p~~r--~~~~~~~~~~~iyv~--GG~~~~~~~~~~~~yd~~~~~W~~~~ 236 (302)
T 2xn4_A 175 VECYNAT--TNEWTYIAEMSTRR--SGAGVGVLNNLLYAV--GGHDGPLVRKSVEVYDPTTNAWRQVA 236 (302)
T ss_dssp EEEEETT--TTEEEEECCCSSCC--BSCEEEEETTEEEEE--CCBSSSSBCCCEEEEETTTTEEEEEC
T ss_pred EEEEeCC--CCcEEECCCCcccc--ccccEEEECCEEEEE--CCCCCCcccceEEEEeCCCCCEeeCC
Confidence 6666642 36799987666543 222333446788888 32211 25999999999999984
No 11
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.35 E-value=1.2e-10 Score=104.23 Aligned_cols=191 Identities=10% Similarity=0.090 Sum_probs=125.8
Q ss_pred CceEEEEcCCcccEEecCCCCCCCce----------eEEE-Ee---cCCCCCCcEEEEEEcCCCceeEeccCCCceeeec
Q 018497 114 RSLIYLWNPLIKKYMTLPRPSLNPRY----------LGFG-VN---SVSGHLDDFKVVYSLRSNSWKNIAYGFPRSIEIN 179 (355)
Q Consensus 114 ~~~~~V~NP~T~~~~~LP~~~~~~~~----------~~~g-~d---~~~~~~~~ykvvyss~t~~W~~~~~~~p~~~~~~ 179 (355)
...+.++||.+++|..+++++..+.. +.+| .+ ......++.. +||..+++|+.++ .+|......
T Consensus 38 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~-~~d~~~~~W~~~~-~~p~~r~~~ 115 (308)
T 1zgk_A 38 LSYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALD-CYNPMTNQWSPCA-PMSVPRNRI 115 (308)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEE-EEETTTTEEEECC-CCSSCCBTC
T ss_pred cceEEEEcCCCCeEeECCCCCcccccceEEEECCEEEEECCCcCCCCCCeecceEE-EECCCCCeEeECC-CCCcCcccc
Confidence 45789999999999999887766432 2222 21 0000011111 1999999999998 677644332
Q ss_pred cccccceeEeCceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEe-cCCCCCCCCCCceEEEEECCeEEEEEecCCCCcc
Q 018497 180 RSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTV-MMPYDLSTDDADKYLNVFDGYLCVFATIPNNTFR 258 (355)
Q Consensus 180 ~~~~~~~v~~~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i-~lP~~~~~~~~~~~L~~~~G~L~~v~~~~~~~~~ 258 (355)
. .+.++|.+|.+++.. +......+..||+.+++|+.+ ++| ..+ .....+..+|+|+++++..... .
T Consensus 116 ~-----~~~~~~~iyv~GG~~---~~~~~~~~~~yd~~~~~W~~~~~~p-~~r---~~~~~~~~~~~iyv~GG~~~~~-~ 182 (308)
T 1zgk_A 116 G-----VGVIDGHIYAVGGSH---GCIHHNSVERYEPERDEWHLVAPML-TRR---IGVGVAVLNRLLYAVGGFDGTN-R 182 (308)
T ss_dssp E-----EEEETTEEEEECCEE---TTEECCCEEEEETTTTEEEECCCCS-SCC---BSCEEEEETTEEEEECCBCSSC-B
T ss_pred E-----EEEECCEEEEEcCCC---CCcccccEEEECCCCCeEeECCCCC-ccc---cceEEEEECCEEEEEeCCCCCC-c
Confidence 2 678899999998754 111235689999999999998 666 544 3456677899999998865421 1
Q ss_pred EEEEEEeccCCCCCCeEEEEEecCCCceeEeEEEeeCCcEEEEEEeeCC----ceEEEEEeCCCCeEEEEE
Q 018497 259 SYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHG----GYGLLVYNPHSDTFKCIG 325 (355)
Q Consensus 259 ~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~----~~~l~~yd~~t~~~~~v~ 325 (355)
.-.+|.++-. ...|+++..++.... ...++..+++||+. ...+ ...+..||+++++|+.+.
T Consensus 183 ~~~~~~yd~~--~~~W~~~~~~p~~r~--~~~~~~~~~~iyv~--GG~~~~~~~~~v~~yd~~~~~W~~~~ 247 (308)
T 1zgk_A 183 LNSAECYYPE--RNEWRMITAMNTIRS--GAGVCVLHNCIYAA--GGYDGQDQLNSVERYDVETETWTFVA 247 (308)
T ss_dssp CCCEEEEETT--TTEEEECCCCSSCCB--SCEEEEETTEEEEE--CCBCSSSBCCCEEEEETTTTEEEECC
T ss_pred CceEEEEeCC--CCeEeeCCCCCCccc--cceEEEECCEEEEE--eCCCCCCccceEEEEeCCCCcEEECC
Confidence 2346666642 367998866655432 22233346788888 3221 126999999999999884
No 12
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.31 E-value=2.4e-10 Score=104.35 Aligned_cols=217 Identities=14% Similarity=0.131 Sum_probs=128.7
Q ss_pred EEeeeCceEEEeecCCCCceEEEEcCC--cccEEecCCCC-CCCce----------eEEE-E-ecCCCCCCcEE----EE
Q 018497 97 VVGSCNGVLCFCSNGSDRSLIYLWNPL--IKKYMTLPRPS-LNPRY----------LGFG-V-NSVSGHLDDFK----VV 157 (355)
Q Consensus 97 ~~~s~~GLl~l~~~~~~~~~~~V~NP~--T~~~~~LP~~~-~~~~~----------~~~g-~-d~~~~~~~~yk----vv 157 (355)
..+..+|.|.+..+. ....++++||. +++|..+|+++ ..+.. +.+| + +.. ..... +.
T Consensus 14 ~~~~~~~~iyv~GG~-~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~---~~~~~~~~~v~ 89 (357)
T 2uvk_A 14 TGAIDNDTVYIGLGS-AGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNS---EGLTQVFNDVH 89 (357)
T ss_dssp EEEEETTEEEEECGG-GTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEECT---TSCEEECCCEE
T ss_pred EEEEECCEEEEEeCc-CCCeEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEcCCCCCC---CccceeeccEE
Confidence 334447777666531 34579999998 49999999877 44321 2222 2 100 11111 11
Q ss_pred -EEcCCCceeEeccCCC-ceeeeccccccceeEeCceEEEEEeeeccC-------------------------------C
Q 018497 158 -YSLRSNSWKNIAYGFP-RSIEINRSHINSSVFLNGSVHWCARFSCYH-------------------------------D 204 (355)
Q Consensus 158 -yss~t~~W~~~~~~~p-~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~-------------------------------~ 204 (355)
||..+++|+.++ .++ ...... . .+.++|++|.+++..... .
T Consensus 90 ~yd~~~~~W~~~~-~~~p~~r~~~-~----~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (357)
T 2uvk_A 90 KYNPKTNSWVKLM-SHAPMGMAGH-V----TFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAED 163 (357)
T ss_dssp EEETTTTEEEECS-CCCSSCCSSE-E----EEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGG
T ss_pred EEeCCCCcEEECC-CCCCcccccc-e----EEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccc
Confidence 999999999998 555 332222 1 567999999998753000 0
Q ss_pred CCCCcEEEEEEcCCceeeEe-cCCCCCCCCCCceEEEEECCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCC
Q 018497 205 NSCPWLIVSFDFAKEIFQTV-MMPYDLSTDDADKYLNVFDGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKP 283 (355)
Q Consensus 205 ~~~~~~Il~fD~~~~~~~~i-~lP~~~~~~~~~~~L~~~~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~ 283 (355)
......+.+||+.+++|+.+ ++| .... ....++..+|+|+++++........-++|.++-......|+++..++..
T Consensus 164 ~~~~~~v~~yd~~~~~W~~~~~~p-~~~~--~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~ 240 (357)
T 2uvk_A 164 YFFNKFLLSFDPSTQQWSYAGESP-WYGT--AGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSP 240 (357)
T ss_dssp GCCCCEEEEEETTTTEEEEEEECS-SCCC--BSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTT
T ss_pred cCCcccEEEEeCCCCcEEECCCCC-CCCc--ccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCC
Confidence 00135899999999999998 677 4331 2356788899999998754311123456666522224679988766543
Q ss_pred CceeEeEEEeeCCcEEEEEEeeCC-------------------ceEEEEEeCCCCeEEEEEE
Q 018497 284 QRIWWPLGFTERGKIFIRGECRHG-------------------GYGLLVYNPHSDTFKCIGV 326 (355)
Q Consensus 284 ~~~~~~~~~~~~g~i~~~~~~~~~-------------------~~~l~~yd~~t~~~~~v~~ 326 (355)
.......++..+++||+.|-.... ...+..||+++++|+.+.-
T Consensus 241 ~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~ 302 (357)
T 2uvk_A 241 DGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGE 302 (357)
T ss_dssp TCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEE
T ss_pred cccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCC
Confidence 321222334456788888310010 0248899999999999843
No 13
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.28 E-value=4.1e-10 Score=101.09 Aligned_cols=195 Identities=10% Similarity=0.158 Sum_probs=121.9
Q ss_pred ceEEEEcCCcccEEecCCCC-CCCce----------eEEEE---ecCCCCCCcE--EEE-EEcCCCceeEeccCCCceee
Q 018497 115 SLIYLWNPLIKKYMTLPRPS-LNPRY----------LGFGV---NSVSGHLDDF--KVV-YSLRSNSWKNIAYGFPRSIE 177 (355)
Q Consensus 115 ~~~~V~NP~T~~~~~LP~~~-~~~~~----------~~~g~---d~~~~~~~~y--kvv-yss~t~~W~~~~~~~p~~~~ 177 (355)
....++||.|++|...|.+. ..+.. +.+|= +.. ...... .+. ||..+++|+.++ .+|....
T Consensus 24 ~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~-~~~~~~~~~~~~~d~~~~~W~~~~-~~p~~r~ 101 (318)
T 2woz_A 24 TAAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEE-NKDQPLQSYFFQLDNVSSEWVGLP-PLPSARC 101 (318)
T ss_dssp SEEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC--------CCCBEEEEEETTTTEEEECS-CBSSCBC
T ss_pred cceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCcc-ccCCCccccEEEEeCCCCcEEECC-CCCcccc
Confidence 34789999999998854332 12211 33442 111 000111 132 999999999998 7776543
Q ss_pred eccccccceeEeCceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEe-cCCCCCCCCCCceEEEEECCeEEEEEecCCCC
Q 018497 178 INRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTV-MMPYDLSTDDADKYLNVFDGYLCVFATIPNNT 256 (355)
Q Consensus 178 ~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i-~lP~~~~~~~~~~~L~~~~G~L~~v~~~~~~~ 256 (355)
... .+.++|.+|.+++... .+......+.+||+.+++|+.+ ++| ..+ .....+..+|+|+++++.....
T Consensus 102 ~~~-----~~~~~~~iyv~GG~~~-~~~~~~~~~~~yd~~~~~W~~~~~~p-~~r---~~~~~~~~~~~iyv~GG~~~~~ 171 (318)
T 2woz_A 102 LFG-----LGEVDDKIYVVAGKDL-QTEASLDSVLCYDPVAAKWSEVKNLP-IKV---YGHNVISHNGMIYCLGGKTDDK 171 (318)
T ss_dssp SCE-----EEEETTEEEEEEEEBT-TTCCEEEEEEEEETTTTEEEEECCCS-SCE---ESCEEEEETTEEEEECCEESSS
T ss_pred ccc-----eEEECCEEEEEcCccC-CCCcccceEEEEeCCCCCEeECCCCC-Ccc---cccEEEEECCEEEEEcCCCCCC
Confidence 322 6788999999987640 0122335799999999999998 677 544 3445677899999998753211
Q ss_pred ccEEEEEEeccCCCCCCeEEEEEecCCCceeEeEEEeeCCcEEEEEEeeCCc--eEEEEEeCCCCeEEEEE
Q 018497 257 FRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGG--YGLLVYNPHSDTFKCIG 325 (355)
Q Consensus 257 ~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~--~~l~~yd~~t~~~~~v~ 325 (355)
...-.+|.++-. ...|+++..++... ....++..+++||+.|-....+ ..+..||+++++|+.+.
T Consensus 172 ~~~~~~~~yd~~--~~~W~~~~~~p~~r--~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~ 238 (318)
T 2woz_A 172 KCTNRVFIYNPK--KGDWKDLAPMKTPR--SMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMT 238 (318)
T ss_dssp CBCCCEEEEETT--TTEEEEECCCSSCC--BSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEECC
T ss_pred CccceEEEEcCC--CCEEEECCCCCCCc--ccceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEECC
Confidence 123346777642 36799987665443 2222333467888883111221 26889999999999984
No 14
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.12 E-value=3.2e-08 Score=90.12 Aligned_cols=236 Identities=12% Similarity=0.082 Sum_probs=137.1
Q ss_pred eeeeccC--CcccccCCC-CCCCCCCCCeEEEeeeCceEEEeecC--------CCCceEEEEcCCcccEEecCCCC-CCC
Q 018497 70 LGFYSTK--CKEFEDLCD-PPFRTQLADLDVVGSCNGVLCFCSNG--------SDRSLIYLWNPLIKKYMTLPRPS-LNP 137 (355)
Q Consensus 70 ~~~~~~~--~~~~~~~~~-p~~~~~~~~~~~~~s~~GLl~l~~~~--------~~~~~~~V~NP~T~~~~~LP~~~-~~~ 137 (355)
...|+.. ...|..++. |..+ ......+..+|.|.+..+. .....+.++||.|++|..+++++ ..+
T Consensus 33 ~~~~d~~~~~~~W~~~~~~p~~~---R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r 109 (357)
T 2uvk_A 33 WYKLDTQAKDKKWTALAAFPGGP---RDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGM 109 (357)
T ss_dssp EEEEETTSSSCCEEECCCCTTCC---CBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCC
T ss_pred EEEEccccCCCCeeECCCCCCCc---CccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCccc
Confidence 3466655 366776642 2111 1223344556776655431 01346899999999999999876 333
Q ss_pred ce----------eEEE-EecCCCCC---------------------------------Cc-EEEE-EEcCCCceeEeccC
Q 018497 138 RY----------LGFG-VNSVSGHL---------------------------------DD-FKVV-YSLRSNSWKNIAYG 171 (355)
Q Consensus 138 ~~----------~~~g-~d~~~~~~---------------------------------~~-ykvv-yss~t~~W~~~~~~ 171 (355)
.. +.+| ++.. . .- -.+. ||..+++|+.++ .
T Consensus 110 ~~~~~~~~~~~iyv~GG~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~-~ 185 (357)
T 2uvk_A 110 AGHVTFVHNGKAYVTGGVNQN---IFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAG-E 185 (357)
T ss_dssp SSEEEEEETTEEEEEECCCHH---HHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEE-E
T ss_pred ccceEEEECCEEEEEeCcCCC---cCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECC-C
Confidence 11 3333 2211 0 00 1222 999999999998 6
Q ss_pred CCceeeeccccccceeEeCceEEEEEeeeccCCCCCCcEEEEEEc--CCceeeEe-cCCCCCCCCCCceEEEEECCeEEE
Q 018497 172 FPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDF--AKEIFQTV-MMPYDLSTDDADKYLNVFDGYLCV 248 (355)
Q Consensus 172 ~p~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~~~Il~fD~--~~~~~~~i-~lP~~~~~~~~~~~L~~~~G~L~~ 248 (355)
+|........ .+.++|.+|.+++.. ........+..||+ .+++|+.+ ++| .... ......+..+|+|++
T Consensus 186 ~p~~~~~~~~----~~~~~~~iyv~GG~~--~~~~~~~~v~~~d~d~~~~~W~~~~~~~-~~~~-~~~~~~~~~~~~iyv 257 (357)
T 2uvk_A 186 SPWYGTAGAA----VVNKGDKTWLINGEA--KPGLRTDAVFELDFTGNNLKWNKLAPVS-SPDG-VAGGFAGISNDSLIF 257 (357)
T ss_dssp CSSCCCBSCE----EEEETTEEEEECCEE--ETTEECCCEEEEECC---CEEEECCCSS-TTTC-CBSCEEEEETTEEEE
T ss_pred CCCCCccccc----EEEECCEEEEEeeec--CCCcccCceEEEEecCCCCcEEecCCCC-CCcc-cccceEEEECCEEEE
Confidence 7754333222 788999999998754 11112345777876 99999998 555 3321 134457889999999
Q ss_pred EEecCCC----------------CccEEEEEEeccCCCCCCeEEEEEecCCCceeEeEEEeeCCcEEEEEEeeCCc---e
Q 018497 249 FATIPNN----------------TFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGG---Y 309 (355)
Q Consensus 249 v~~~~~~----------------~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~---~ 309 (355)
+++.... ......+|+++-. +..|+++..++.... ...++..+++||+.|=...++ .
T Consensus 258 ~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~--~~~W~~~~~~p~~r~--~~~~~~~~~~i~v~GG~~~~~~~~~ 333 (357)
T 2uvk_A 258 AGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWH--NGKWDKSGELSQGRA--YGVSLPWNNSLLIIGGETAGGKAVT 333 (357)
T ss_dssp ECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC-----CEEEEECSSCCB--SSEEEEETTEEEEEEEECGGGCEEE
T ss_pred EcCccccCCcccccccceeccccccceeeEEEEecC--CCceeeCCCCCCCcc--cceeEEeCCEEEEEeeeCCCCCEee
Confidence 9875321 0112345665542 468999988776552 223344577888883110111 2
Q ss_pred EEEEEeCCCCeEEEE
Q 018497 310 GLLVYNPHSDTFKCI 324 (355)
Q Consensus 310 ~l~~yd~~t~~~~~v 324 (355)
.++.+++++++|.+.
T Consensus 334 ~v~~l~~~~~~~~~~ 348 (357)
T 2uvk_A 334 DSVLITVKDNKVTVQ 348 (357)
T ss_dssp EEEEEEC-CCSCEEE
T ss_pred eEEEEEEcCcEeEee
Confidence 689999999999776
No 15
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=99.09 E-value=5.1e-11 Score=76.82 Aligned_cols=41 Identities=29% Similarity=0.599 Sum_probs=38.1
Q ss_pred CCCCCCHHHHHHHHhcCCcccchhhcccchhhHhhhCChHH
Q 018497 4 SSFRLPEDVMIDIFLRLEVKNLARLRCVCKSWNTLLTSKTF 44 (355)
Q Consensus 4 ~~~~LP~dll~eIL~rLP~~~l~r~r~VcK~W~~li~~~~F 44 (355)
.+..||+|++.+||++||++++.++++|||+|+.++.++.|
T Consensus 8 ~~~~LP~eil~~I~~~L~~~dl~~~~~Vck~w~~~~~~~~l 48 (53)
T 1fs1_A 8 SWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESL 48 (53)
T ss_dssp -CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCGGG
T ss_pred CHHHCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHH
Confidence 56799999999999999999999999999999999998875
No 16
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.05 E-value=1.9e-08 Score=99.85 Aligned_cols=206 Identities=14% Similarity=0.107 Sum_probs=123.6
Q ss_pred eCceEEEeecC--CCCceEEEEcCCcccEEecC-C-----CCCCCceeEEEEe-------------cCCCCCCcEEEEEE
Q 018497 101 CNGVLCFCSNG--SDRSLIYLWNPLIKKYMTLP-R-----PSLNPRYLGFGVN-------------SVSGHLDDFKVVYS 159 (355)
Q Consensus 101 ~~GLl~l~~~~--~~~~~~~V~NP~T~~~~~LP-~-----~~~~~~~~~~g~d-------------~~~~~~~~ykvvys 159 (355)
.+|.|++.++. .....++++||.|++|..++ + ++..+..++...- ......++..+ ||
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~-yd 474 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWI-FD 474 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEE-EE
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEE-Ee
Confidence 56666655431 12456899999999999988 4 2333322222111 11000111111 99
Q ss_pred cCCCceeEeccCCCceeeeccccccceeEe-CceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEec----CCCCCCCCC
Q 018497 160 LRSNSWKNIAYGFPRSIEINRSHINSSVFL-NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVM----MPYDLSTDD 234 (355)
Q Consensus 160 s~t~~W~~~~~~~p~~~~~~~~~~~~~v~~-~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i~----lP~~~~~~~ 234 (355)
..+++|+.++ .+|....... .+.+ +|++|.+++.. ... .+.+||+.+++|+.+. +| ..+.
T Consensus 475 ~~t~~W~~~~-~~p~~R~~h~-----~~~~~~~~iyv~GG~~----~~~--~v~~yd~~t~~W~~~~~~g~~p-~~r~-- 539 (695)
T 2zwa_A 475 MKTREWSMIK-SLSHTRFRHS-----ACSLPDGNVLILGGVT----EGP--AMLLYNVTEEIFKDVTPKDEFF-QNSL-- 539 (695)
T ss_dssp TTTTEEEECC-CCSBCCBSCE-----EEECTTSCEEEECCBC----SSC--SEEEEETTTTEEEECCCSSGGG-GSCC--
T ss_pred CCCCcEEECC-CCCCCcccce-----EEEEcCCEEEEECCCC----CCC--CEEEEECCCCceEEccCCCCCC-Cccc--
Confidence 9999999998 7776544332 5554 99999998765 112 7999999999999985 55 4432
Q ss_pred CceEEEEEC---CeEEEEEecCCCC-ccEEEEEEeccCCCCCC------eEEEEEecCCCceeEeEEEeeCCcEEEEEEe
Q 018497 235 ADKYLNVFD---GYLCVFATIPNNT-FRSYELWVMKEYGLTES------WTKLYTIEKPQRIWWPLGFTERGKIFIRGEC 304 (355)
Q Consensus 235 ~~~~L~~~~---G~L~~v~~~~~~~-~~~l~iW~l~~~~~~~~------W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~ 304 (355)
....+.++ |+|+++++..... ...-.+|.++-. ... |+++..++..........+.++|+||+. .
T Consensus 540 -~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~--~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~--G 614 (695)
T 2zwa_A 540 -VSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYD--AENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIV--G 614 (695)
T ss_dssp -BSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEEC--TTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEE--C
T ss_pred -ceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEcc--CCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEE--C
Confidence 22223334 8999998864311 122345555532 234 8888775422212223334444789988 3
Q ss_pred eCC-------ceEEEEEeCCCCeEEEEEEe
Q 018497 305 RHG-------GYGLLVYNPHSDTFKCIGVH 327 (355)
Q Consensus 305 ~~~-------~~~l~~yd~~t~~~~~v~~~ 327 (355)
+.+ ...+..||+++++|+.+.+.
T Consensus 615 G~~~~~~~~~~~~v~~yd~~t~~W~~~~~p 644 (695)
T 2zwa_A 615 GTSPSGLFDRTNSIISLDPLSETLTSIPIS 644 (695)
T ss_dssp CBCSSCCCCTTTSEEEEETTTTEEEECCCC
T ss_pred CccCCCCCCCCCeEEEEECCCCeEEEeecc
Confidence 211 12599999999999966543
No 17
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=99.04 E-value=1.2e-10 Score=101.82 Aligned_cols=50 Identities=22% Similarity=0.416 Sum_probs=46.4
Q ss_pred CCCCCCCHHHHHHHHhcCCcccch-hhcccchhhHhhhCChHHHHHHHhcC
Q 018497 3 CSSFRLPEDVMIDIFLRLEVKNLA-RLRCVCKSWNTLLTSKTFVEIHLNQS 52 (355)
Q Consensus 3 ~~~~~LP~dll~eIL~rLP~~~l~-r~r~VcK~W~~li~~~~F~~~~~~~~ 52 (355)
..+..||+||+.+||+|||+++|+ ||++|||+|+++++++.|.+.+..+.
T Consensus 49 ~~~~~LP~ell~~Il~~Lp~~~L~~r~~~VCk~Wr~l~~~~~~w~~~~~~~ 99 (297)
T 2e31_A 49 EYLAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPLWLLKCQQE 99 (297)
T ss_dssp CCTTSSCHHHHHHHHHTSCHHHHHHTGGGTCHHHHHHHTSHHHHHHHHHHT
T ss_pred cChhhCCHHHHHHHHHcCCHHHHHHHHHHHhHHHHHHhcChHHHHHHhhcc
Confidence 356799999999999999999999 99999999999999999999887765
No 18
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.92 E-value=3.7e-06 Score=78.49 Aligned_cols=277 Identities=14% Similarity=0.128 Sum_probs=136.0
Q ss_pred CCCCCCHHHHHHHHhcCCcccchhhcccchhhHhhhCChHHHHHHHhcCCC-CCCcEEEee-cCC---CC-ceeeeccC-
Q 018497 4 SSFRLPEDVMIDIFLRLEVKNLARLRCVCKSWNTLLTSKTFVEIHLNQSMR-NPRPLLFRH-GIS---PS-YLGFYSTK- 76 (355)
Q Consensus 4 ~~~~LP~dll~eIL~rLP~~~l~r~r~VcK~W~~li~~~~F~~~~~~~~~~-~~~~~~~~~-~~~---~~-~~~~~~~~- 76 (355)
....||+|++..||+.|++++|+++.+|||+|+.++.++.+-+........ .+...-... ... .. ....|...
T Consensus 18 ~~~~lp~e~~~~i~~~l~~~~l~~~~~v~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wk~~~~~~~ 97 (445)
T 2ovr_B 18 FISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLHIKRRKVIKPGFIHSPWKSAYIRQH 97 (445)
T ss_dssp TTTSSCHHHHHHHHTTSCHHHHHHHTTSCHHHHHHHTCSHHHHHHHTTTTCCSCCCCCC--CCSSCCCCCHHHHHHHHHH
T ss_pred hhHHCCHHHHHHHHHhCCHHHHHHHHHHhHHHHhhcCchhHhhhheeecccccccccccceecCCCccCCcHHHHHhhhh
Confidence 356899999999999999999999999999999999998776654432211 111000000 000 00 00011100
Q ss_pred --CcccccCCC--CC-CCCCCCC-eEEEeeeCceEEEeecCCCCceEEEEcCCcccEEecCCCCCCCceeEEEEecC---
Q 018497 77 --CKEFEDLCD--PP-FRTQLAD-LDVVGSCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSV--- 147 (355)
Q Consensus 77 --~~~~~~~~~--p~-~~~~~~~-~~~~~s~~GLl~l~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~g~d~~--- 147 (355)
...|..-.. .. ....... ...+...+.+|+... .++.+.|||..+++....-..... ....+.+++.
T Consensus 98 ~~~~~w~~~~~~~~~~l~~h~~~v~~~~~~~g~~l~sg~---~dg~i~vwd~~~~~~~~~~~~h~~-~v~~~~~~~~~l~ 173 (445)
T 2ovr_B 98 RIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGS---DDNTLKVWSAVTGKCLRTLVGHTG-GVWSSQMRDNIII 173 (445)
T ss_dssp HHHHHHHHSCCCCCEEEECSTTSCEEEEEEETTEEEEEE---TTSCEEEEETTTCCEEEECCCCSS-CEEEEEEETTEEE
T ss_pred hhhhcccCCCcceeEEecccCCCcEEEEEEcCCEEEEEE---CCCcEEEEECCCCcEEEEEcCCCC-CEEEEEecCCEEE
Confidence 011111110 00 0001111 233444455555444 678999999998876543222111 1123333321
Q ss_pred C-CCCCcEEEEEEcCCCceeEeccCCCceeeeccccccceeEeCceEEEEEeeeccCCCCCCcEEEEEEcCCceeeE-ec
Q 018497 148 S-GHLDDFKVVYSLRSNSWKNIAYGFPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQT-VM 225 (355)
Q Consensus 148 ~-~~~~~ykvvyss~t~~W~~~~~~~p~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~-i~ 225 (355)
+ +..+..++ |+.+++.-...- ...... -. .+..++.....+..+ ..|..+|+.+.+... +.
T Consensus 174 s~~~dg~i~v-wd~~~~~~~~~~-~~h~~~----v~---~~~~~~~~l~s~s~d--------g~i~~wd~~~~~~~~~~~ 236 (445)
T 2ovr_B 174 SGSTDRTLKV-WNAETGECIHTL-YGHTST----VR---CMHLHEKRVVSGSRD--------ATLRVWDIETGQCLHVLM 236 (445)
T ss_dssp EEETTSCEEE-EETTTTEEEEEE-CCCSSC----EE---EEEEETTEEEEEETT--------SEEEEEESSSCCEEEEEE
T ss_pred EEeCCCeEEE-EECCcCcEEEEE-CCCCCc----EE---EEEecCCEEEEEeCC--------CEEEEEECCCCcEEEEEc
Confidence 0 00222232 676665322111 000000 00 344445444443333 589999998765433 22
Q ss_pred CCCCCCCCCCceEEEEECCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEeEEEeeCCcEEEEEEee
Q 018497 226 MPYDLSTDDADKYLNVFDGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECR 305 (355)
Q Consensus 226 lP~~~~~~~~~~~L~~~~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~ 305 (355)
-. . ....-+..+|...+++..++ .+.+|.++.. .....+.........+.+ ++..++. ..
T Consensus 237 ~~---~---~~v~~~~~~~~~l~~~~~dg----~i~iwd~~~~------~~~~~~~~~~~~v~~~~~--~~~~l~~--~~ 296 (445)
T 2ovr_B 237 GH---V---AAVRCVQYDGRRVVSGAYDF----MVKVWDPETE------TCLHTLQGHTNRVYSLQF--DGIHVVS--GS 296 (445)
T ss_dssp CC---S---SCEEEEEECSSCEEEEETTS----CEEEEEGGGT------EEEEEECCCSSCEEEEEE--CSSEEEE--EE
T ss_pred CC---c---ccEEEEEECCCEEEEEcCCC----EEEEEECCCC------cEeEEecCCCCceEEEEE--CCCEEEE--Ee
Confidence 22 1 12333444777767666654 8899987641 233344322211222222 5555555 32
Q ss_pred CCceEEEEEeCCCCeEE
Q 018497 306 HGGYGLLVYNPHSDTFK 322 (355)
Q Consensus 306 ~~~~~l~~yd~~t~~~~ 322 (355)
.++ .+..||+++++..
T Consensus 297 ~d~-~i~i~d~~~~~~~ 312 (445)
T 2ovr_B 297 LDT-SIRVWDVETGNCI 312 (445)
T ss_dssp TTS-CEEEEETTTCCEE
T ss_pred CCC-eEEEEECCCCCEE
Confidence 556 4888888777643
No 19
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.87 E-value=4.2e-06 Score=78.43 Aligned_cols=43 Identities=19% Similarity=0.405 Sum_probs=38.1
Q ss_pred CCCCHHHHHHHHhcCCcccchhhcccchhhHhhhCC-hHHHHHH
Q 018497 6 FRLPEDVMIDIFLRLEVKNLARLRCVCKSWNTLLTS-KTFVEIH 48 (355)
Q Consensus 6 ~~LP~dll~eIL~rLP~~~l~r~r~VcK~W~~li~~-~~F~~~~ 48 (355)
..||+|++.+||+.||+++|+++..|||+|+.++.+ +..-+..
T Consensus 16 ~~lp~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~~w~~~ 59 (464)
T 3v7d_B 16 TSLPFEISLKIFNYLQFEDIINSLGVSQNWNKIIRKSTSLWKKL 59 (464)
T ss_dssp HHSCHHHHHHHHTTSCHHHHHHHHTTCHHHHHHHTTCHHHHHHH
T ss_pred HHCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 469999999999999999999999999999999998 6554443
No 20
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.78 E-value=2.3e-06 Score=79.74 Aligned_cols=277 Identities=13% Similarity=0.153 Sum_probs=133.5
Q ss_pred CCCCHH----HHHHHHhcCCcccchhhcccchhhHhhhCChHHHHHHHhcCC-----------CCCC-cEEEeecC----
Q 018497 6 FRLPED----VMIDIFLRLEVKNLARLRCVCKSWNTLLTSKTFVEIHLNQSM-----------RNPR-PLLFRHGI---- 65 (355)
Q Consensus 6 ~~LP~d----ll~eIL~rLP~~~l~r~r~VcK~W~~li~~~~F~~~~~~~~~-----------~~~~-~~~~~~~~---- 65 (355)
..||+| |+..||+.|++++|+++.+|||+|+.++.++.+=+....+.. ...| .+++...+
T Consensus 12 ~~lp~e~~~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 91 (435)
T 1p22_A 12 TALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWKKLIERMVRTDSLWRGLAERRGWGQYLFKNKPPDGN 91 (435)
T ss_dssp HHTGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHSSSGGGGCC--------
T ss_pred HHCCcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhcCcchhhhhhhhccchhhhhhccCCCCCC
Confidence 469999 999999999999999999999999999987654333322110 0011 00111100
Q ss_pred --CCCce-eeecc-------CCcccccCCCC---CC--CCCCCCeEEEeeeCceEEEeecCCCCceEEEEcCCcccEEec
Q 018497 66 --SPSYL-GFYST-------KCKEFEDLCDP---PF--RTQLADLDVVGSCNGVLCFCSNGSDRSLIYLWNPLIKKYMTL 130 (355)
Q Consensus 66 --~~~~~-~~~~~-------~~~~~~~~~~p---~~--~~~~~~~~~~~s~~GLl~l~~~~~~~~~~~V~NP~T~~~~~L 130 (355)
..... ..|.. ....|..-... .. .........+...+..+.... .++.+.|||..+++....
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~g~---~dg~i~iwd~~~~~~~~~ 168 (435)
T 1p22_A 92 APPNSFYRALYPKIIQDIETIESNWRCGRHSLQRIHCRSETSKGVYCLQYDDQKIVSGL---RDNTIKIWDKNTLECKRI 168 (435)
T ss_dssp -CCSHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEECCCSSCCCEEEEECCSSEEEEEE---SSSCEEEEESSSCCEEEE
T ss_pred CCchhhHHhhhhhhhcchhHHHhhhccCCccceEEecccCCCCcEEEEEECCCEEEEEe---CCCeEEEEeCCCCeEEEE
Confidence 00000 01110 00111111000 00 001122333444344444444 578899999998876543
Q ss_pred CCCCCCCceeEEEEecC---C-CCCCcEEEEEEcCCCceeEeccCCCceeeeccccccceeEeCceEEEEEeeeccCCCC
Q 018497 131 PRPSLNPRYLGFGVNSV---S-GHLDDFKVVYSLRSNSWKNIAYGFPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNS 206 (355)
Q Consensus 131 P~~~~~~~~~~~g~d~~---~-~~~~~ykvvyss~t~~W~~~~~~~p~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~~ 206 (355)
-..... ....+.++.. + +..+..++ |+.+++.-...- ..... .-. .+..++.....+..+
T Consensus 169 ~~~h~~-~v~~l~~~~~~l~sg~~dg~i~v-wd~~~~~~~~~~-~~h~~----~v~---~l~~~~~~l~s~s~d------ 232 (435)
T 1p22_A 169 LTGHTG-SVLCLQYDERVIITGSSDSTVRV-WDVNTGEMLNTL-IHHCE----AVL---HLRFNNGMMVTCSKD------ 232 (435)
T ss_dssp ECCCSS-CEEEEECCSSEEEEEETTSCEEE-EESSSCCEEEEE-CCCCS----CEE---EEECCTTEEEEEETT------
T ss_pred EcCCCC-cEEEEEECCCEEEEEcCCCeEEE-EECCCCcEEEEE-cCCCC----cEE---EEEEcCCEEEEeeCC------
Confidence 222211 1133333322 0 00222232 677665432111 10000 001 344455444443333
Q ss_pred CCcEEEEEEcCCceeeEe--cCCCCCCCCCCceEEEEECCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCC
Q 018497 207 CPWLIVSFDFAKEIFQTV--MMPYDLSTDDADKYLNVFDGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQ 284 (355)
Q Consensus 207 ~~~~Il~fD~~~~~~~~i--~lP~~~~~~~~~~~L~~~~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~ 284 (355)
..|..+|+.+..-... .+. ... ....-+..+|...+++..+ ..+.+|.++.. ..+..+....
T Consensus 233 --g~i~vwd~~~~~~~~~~~~~~-~~~---~~v~~~~~~~~~l~s~~~d----g~i~vwd~~~~------~~~~~~~~~~ 296 (435)
T 1p22_A 233 --RSIAVWDMASPTDITLRRVLV-GHR---AAVNVVDFDDKYIVSASGD----RTIKVWNTSTC------EFVRTLNGHK 296 (435)
T ss_dssp --SCEEEEECSSSSCCEEEEEEC-CCS---SCEEEEEEETTEEEEEETT----SEEEEEETTTC------CEEEEEECCS
T ss_pred --CcEEEEeCCCCCCceeeeEec-CCC---CcEEEEEeCCCEEEEEeCC----CeEEEEECCcC------cEEEEEcCCC
Confidence 5789999886653211 111 111 2233344477766666655 48999988752 2334443222
Q ss_pred ceeEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEE
Q 018497 285 RIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFK 322 (355)
Q Consensus 285 ~~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~~~ 322 (355)
.....+.+ ++..++. ...++ .+..||+++++..
T Consensus 297 ~~v~~~~~--~~~~l~~--g~~dg-~i~iwd~~~~~~~ 329 (435)
T 1p22_A 297 RGIACLQY--RDRLVVS--GSSDN-TIRLWDIECGACL 329 (435)
T ss_dssp SCEEEEEE--ETTEEEE--EETTS-CEEEEETTTCCEE
T ss_pred CcEEEEEe--CCCEEEE--EeCCC-eEEEEECCCCCEE
Confidence 11222332 4556666 32566 4999999987653
No 21
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.58 E-value=2.5e-06 Score=84.24 Aligned_cols=244 Identities=11% Similarity=0.050 Sum_probs=132.2
Q ss_pred eeeccCCcccccCCCCCCCCCCCCeEEEeeeCceEEEeecCCCCceEEEEcCCcccEEecCCCCCCCce-----------
Q 018497 71 GFYSTKCKEFEDLCDPPFRTQLADLDVVGSCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRY----------- 139 (355)
Q Consensus 71 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~s~~GLl~l~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~----------- 139 (355)
..|++..+.|..+.....+............+|.|++..+. ....+.++||.|++|..+++++..+.+
T Consensus 222 ~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~-~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~i 300 (656)
T 1k3i_A 222 SSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGN-DAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRV 300 (656)
T ss_dssp EEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSS-STTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCE
T ss_pred EEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCC-CCCceEEecCcCCceeECCCCCccccccceEEecCCeE
Confidence 46777777776654211110111112334467887776641 334799999999999999988776533
Q ss_pred eEEEE-ecCCCCCCcEEEEEEcCCCceeEeccCCCceeee-ccccccceeEeCceEEEEEeeecc-CCCCCCcEEEEEEc
Q 018497 140 LGFGV-NSVSGHLDDFKVVYSLRSNSWKNIAYGFPRSIEI-NRSHINSSVFLNGSVHWCARFSCY-HDNSCPWLIVSFDF 216 (355)
Q Consensus 140 ~~~g~-d~~~~~~~~ykvvyss~t~~W~~~~~~~p~~~~~-~~~~~~~~v~~~G~lyw~~~~~~~-~~~~~~~~Il~fD~ 216 (355)
+.+|- .......++..+ ||..+++|+.++ ........ .... ..+..+|.+|.++..... ........+..||+
T Consensus 301 yv~GG~~~~~~~~~~~e~-yd~~t~~W~~~~-~~~~~p~~~~~~~--~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~ 376 (656)
T 1k3i_A 301 FTIGGSWSGGVFEKNGEV-YSPSSKTWTSLP-NAKVNPMLTADKQ--GLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYT 376 (656)
T ss_dssp EEECCCCCSSSCCCCEEE-EETTTTEEEEET-TSCSGGGCCCCTT--GGGTTTCSCCEEECGGGCEEECCSSSEEEEEEC
T ss_pred EEEeCcccCCcccccceE-eCCCCCcceeCC-Ccccccccccccc--ceeecCCceEEEECCCCcEEEecCccceeeeec
Confidence 22221 110000112222 999999999985 22111100 0111 145578888888754310 00112457999999
Q ss_pred CCceeeEe-cCCCCC-----CCCCCceEEE--EECCeEEEEEecCCC-----CccEEEEEEeccCCCCCCeEEEE--Eec
Q 018497 217 AKEIFQTV-MMPYDL-----STDDADKYLN--VFDGYLCVFATIPNN-----TFRSYELWVMKEYGLTESWTKLY--TIE 281 (355)
Q Consensus 217 ~~~~~~~i-~lP~~~-----~~~~~~~~L~--~~~G~L~~v~~~~~~-----~~~~l~iW~l~~~~~~~~W~~~~--~i~ 281 (355)
.++.|... ..+ .. ........++ ..+|+|+++++.... ......|+..+. ....|.+.. .++
T Consensus 377 ~~~~w~~~~~~~-~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~--~~~~W~~~~~~~mp 453 (656)
T 1k3i_A 377 SGSGDVKSAGKR-QSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEP--GTSPNTVFASNGLY 453 (656)
T ss_dssp STTCEEEEEEEC-EETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCST--TSCCEEEECTTCCS
T ss_pred CCcceeecCCcc-ccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCC--CCCCeeEEccCCCC
Confidence 99998653 211 11 0000111111 358999999875320 011224444443 245798875 555
Q ss_pred CCCceeEeEEEeeCCcEEEEEEeeCC----------ceEEEEEeCCCCeEEEEE
Q 018497 282 KPQRIWWPLGFTERGKIFIRGECRHG----------GYGLLVYNPHSDTFKCIG 325 (355)
Q Consensus 282 ~~~~~~~~~~~~~~g~i~~~~~~~~~----------~~~l~~yd~~t~~~~~v~ 325 (355)
... ......+..+|+||+. ...+ ...+..||+++++|+.+.
T Consensus 454 ~~R-~~~~~~~l~~g~i~v~--GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~ 504 (656)
T 1k3i_A 454 FAR-TFHTSVVLPDGSTFIT--GGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQN 504 (656)
T ss_dssp SCC-BSCEEEECTTSCEEEE--CCBSBCCTTCCCSBCCCCEEEEGGGTEEEECC
T ss_pred CCc-ccCCeEECCCCCEEEE--CCcccCcCcCCCCcccceEEEcCCCCceeecC
Confidence 443 1222333447899998 3211 125899999999998864
No 22
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=98.37 E-value=7.4e-06 Score=81.32 Aligned_cols=150 Identities=7% Similarity=0.010 Sum_probs=99.2
Q ss_pred EEcCCCceeEeccC-----CCceeeeccccccceeEe--CceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEe-cCCCC
Q 018497 158 YSLRSNSWKNIAYG-----FPRSIEINRSHINSSVFL--NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTV-MMPYD 229 (355)
Q Consensus 158 yss~t~~W~~~~~~-----~p~~~~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i-~lP~~ 229 (355)
||..+++|+.++.. +|....... .+.+ +|.+|.+++.. ........+..||+.+++|+.+ ++| .
T Consensus 417 yd~~~~~W~~~~~~~p~~~~p~~R~~hs-----~~~~~~~~~lyv~GG~~--~~~~~~~dv~~yd~~t~~W~~~~~~p-~ 488 (695)
T 2zwa_A 417 LSIHYDKIDMKNIEVSSSEVPVARMCHT-----FTTISRNNQLLLIGGRK--APHQGLSDNWIFDMKTREWSMIKSLS-H 488 (695)
T ss_dssp EEECSSCEEEEECCCCCSCCCCCCBSCE-----EEEETTTTEEEEECCBS--STTCBCCCCEEEETTTTEEEECCCCS-B
T ss_pred EECCCCeEEEeccCCCCCCCCccccceE-----EEEEccCCEEEEEcCCC--CCCCccccEEEEeCCCCcEEECCCCC-C
Confidence 99999999988722 343332222 6778 99999998765 1111235689999999999998 677 5
Q ss_pred CCCCCCceEEEEE-CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEE---ecCCCceeEeEEEeeC-CcEEEEEEe
Q 018497 230 LSTDDADKYLNVF-DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYT---IEKPQRIWWPLGFTER-GKIFIRGEC 304 (355)
Q Consensus 230 ~~~~~~~~~L~~~-~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~---i~~~~~~~~~~~~~~~-g~i~~~~~~ 304 (355)
.+ .....+.. +|+|+++++.... . .+|..+-. ...|+.+.. ++........+.+..+ +.||+. .
T Consensus 489 ~R---~~h~~~~~~~~~iyv~GG~~~~---~-~v~~yd~~--t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~--G 557 (695)
T 2zwa_A 489 TR---FRHSACSLPDGNVLILGGVTEG---P-AMLLYNVT--EEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIIL--G 557 (695)
T ss_dssp CC---BSCEEEECTTSCEEEECCBCSS---C-SEEEEETT--TTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEE--C
T ss_pred Cc---ccceEEEEcCCEEEEECCCCCC---C-CEEEEECC--CCceEEccCCCCCCCcccceeEEEEeCCCCEEEEE--C
Confidence 44 34455664 9999999987652 2 67777653 367998765 3333311221332333 678888 3
Q ss_pred eC--Cc----eEEEEEeCCCCe------EEEEEE
Q 018497 305 RH--GG----YGLLVYNPHSDT------FKCIGV 326 (355)
Q Consensus 305 ~~--~~----~~l~~yd~~t~~------~~~v~~ 326 (355)
+. ++ ..+..||+++++ |+.+.-
T Consensus 558 G~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~ 591 (695)
T 2zwa_A 558 GGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQ 591 (695)
T ss_dssp CBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEE
T ss_pred CcCCCCCeeeCcEEEEEccCCccccceEEEEcCC
Confidence 22 11 269999999999 777754
No 23
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.18 E-value=8.4e-06 Score=80.42 Aligned_cols=147 Identities=14% Similarity=0.133 Sum_probs=93.7
Q ss_pred EEcCCCceeEeccCCCceeeeccccccceeEe--CceEEEEEeeeccC-C--CCCCcEEEEEEcCCceeeEe-cCCCCCC
Q 018497 158 YSLRSNSWKNIAYGFPRSIEINRSHINSSVFL--NGSVHWCARFSCYH-D--NSCPWLIVSFDFAKEIFQTV-MMPYDLS 231 (355)
Q Consensus 158 yss~t~~W~~~~~~~p~~~~~~~~~~~~~v~~--~G~lyw~~~~~~~~-~--~~~~~~Il~fD~~~~~~~~i-~lP~~~~ 231 (355)
|+..+++|+.+. .+|... . . .+++ +|++|.+++..... + ......+..||+.+++|+.+ .+| ...
T Consensus 171 ~dp~~~~W~~~~-~~P~~~--~-~----~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~-~~~ 241 (656)
T 1k3i_A 171 PQPGLGRWGPTI-DLPIVP--A-A----AAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTV-TKH 241 (656)
T ss_dssp CCTTSCEEEEEE-ECSSCC--S-E----EEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEE-CSC
T ss_pred CCCCCCeeeeec-cCCCCc--e-e----EEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccC-CCC
Confidence 889999999887 666522 1 1 4445 99999998754100 0 11224689999999999877 455 333
Q ss_pred CCCCceEEE-EECCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEeEEEeeCCcEEEEEEee-CCc-
Q 018497 232 TDDADKYLN-VFDGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECR-HGG- 308 (355)
Q Consensus 232 ~~~~~~~L~-~~~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~-~~~- 308 (355)
.. .....+ ..+|+|+++++... ..+.+|-.+. ..|++...++... .....++..+|+||+. .. .++
T Consensus 242 ~~-~~~~~~~~~~g~lyv~GG~~~---~~v~~yd~~t----~~W~~~~~~~~~R-~~~s~~~~~dg~iyv~--GG~~~~~ 310 (656)
T 1k3i_A 242 DM-FCPGISMDGNGQIVVTGGNDA---KKTSLYDSSS----DSWIPGPDMQVAR-GYQSSATMSDGRVFTI--GGSWSGG 310 (656)
T ss_dssp CC-SSCEEEECTTSCEEEECSSST---TCEEEEEGGG----TEEEECCCCSSCC-SSCEEEECTTSCEEEE--CCCCCSS
T ss_pred CC-ccccccCCCCCCEEEeCCCCC---CceEEecCcC----CceeECCCCCccc-cccceEEecCCeEEEE--eCcccCC
Confidence 21 222233 45799999998655 3444444332 5799876655443 2222333347899998 42 111
Q ss_pred ---eEEEEEeCCCCeEEEE
Q 018497 309 ---YGLLVYNPHSDTFKCI 324 (355)
Q Consensus 309 ---~~l~~yd~~t~~~~~v 324 (355)
..+..||+++++|+.+
T Consensus 311 ~~~~~~e~yd~~t~~W~~~ 329 (656)
T 1k3i_A 311 VFEKNGEVYSPSSKTWTSL 329 (656)
T ss_dssp SCCCCEEEEETTTTEEEEE
T ss_pred cccccceEeCCCCCcceeC
Confidence 2699999999999987
No 24
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=97.82 E-value=1e-05 Score=70.04 Aligned_cols=50 Identities=24% Similarity=0.333 Sum_probs=44.0
Q ss_pred CCCCCHHHHHHHHhcCCcccchhhcccchhhHhhhCChHHHHHHHhcCCC
Q 018497 5 SFRLPEDVMIDIFLRLEVKNLARLRCVCKSWNTLLTSKTFVEIHLNQSMR 54 (355)
Q Consensus 5 ~~~LP~dll~eIL~rLP~~~l~r~r~VcK~W~~li~~~~F~~~~~~~~~~ 54 (355)
...||+|++..||+.|++++|+++.+|||+||.+..++..=+.+..+..+
T Consensus 5 l~~LP~ei~l~IlsfL~p~DL~~l~~vcr~Wr~la~D~~LWr~~l~rd~~ 54 (312)
T 3l2o_B 5 LTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLLRDLP 54 (312)
T ss_dssp HHHSCHHHHHHHHHTSCHHHHHHHHTTCHHHHHHHTCHHHHHHHHHSSGG
T ss_pred hHhCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccchHHHHHHhccCC
Confidence 35799999999999999999999999999999999999887766665533
No 25
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=97.56 E-value=3e-05 Score=69.52 Aligned_cols=40 Identities=30% Similarity=0.597 Sum_probs=37.0
Q ss_pred CCCCCCHHHHHHHHhcCCcccchhhcccchhhHhhhCChH
Q 018497 4 SSFRLPEDVMIDIFLRLEVKNLARLRCVCKSWNTLLTSKT 43 (355)
Q Consensus 4 ~~~~LP~dll~eIL~rLP~~~l~r~r~VcK~W~~li~~~~ 43 (355)
.+..||+|++.+||.+|+.+++.+++.|||+|+.+..++.
T Consensus 8 ~~~~LP~eil~~If~~L~~~d~~~~~~vc~~W~~~~~~~~ 47 (336)
T 2ast_B 8 SWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDES 47 (336)
T ss_dssp CSSSSCHHHHHHHHTTSCHHHHHHTTSSCHHHHHHHTCST
T ss_pred ChhhCCHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCch
Confidence 4679999999999999999999999999999999987664
No 26
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.01 E-value=0.00021 Score=69.24 Aligned_cols=36 Identities=28% Similarity=0.590 Sum_probs=29.5
Q ss_pred CCCCCCCHHHHHHHHhcCC-cccchhhcccchhhHhh
Q 018497 3 CSSFRLPEDVMIDIFLRLE-VKNLARLRCVCKSWNTL 38 (355)
Q Consensus 3 ~~~~~LP~dll~eIL~rLP-~~~l~r~r~VcK~W~~l 38 (355)
..+..||+|++.+||++|| .+++.+++.|||+|+.+
T Consensus 4 d~~~~LPdevL~~If~~L~~~~d~~~~s~vck~W~~~ 40 (594)
T 2p1m_B 4 RIALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEI 40 (594)
T ss_dssp ------CHHHHHHHHHTCCCHHHHHHHHTSCHHHHHH
T ss_pred cchhhCCHHHHHHHHhhcCCchhHHHHHHHHHHHHHh
Confidence 3467899999999999999 99999999999999988
No 27
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=96.76 E-value=0.00042 Score=67.09 Aligned_cols=35 Identities=20% Similarity=0.446 Sum_probs=32.5
Q ss_pred CCCCCCHHHHHHHHhcC-CcccchhhcccchhhHhh
Q 018497 4 SSFRLPEDVMIDIFLRL-EVKNLARLRCVCKSWNTL 38 (355)
Q Consensus 4 ~~~~LP~dll~eIL~rL-P~~~l~r~r~VcK~W~~l 38 (355)
....||||++.+||.+| |.+++.+++.|||+|+.+
T Consensus 12 ~~~~LPdeil~~I~~~L~~~~d~~~~s~vck~W~~~ 47 (592)
T 3ogk_B 12 SCVATVDDVIEQVMTYITDPKDRDSASLVCRRWFKI 47 (592)
T ss_dssp CCCCCGGGTHHHHHTTCCCHHHHHHHTTSCHHHHHH
T ss_pred ccCCCCHHHHHHHHHhcCCHHHHHHHHHHhHHHHHh
Confidence 34589999999999999 899999999999999987
No 28
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.35 E-value=0.26 Score=43.53 Aligned_cols=69 Identities=7% Similarity=0.154 Sum_probs=45.7
Q ss_pred CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEeEEEeeC---CcEEEEEEeeCCceEEEEEeCCCC
Q 018497 243 DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTER---GKIFIRGECRHGGYGLLVYNPHSD 319 (355)
Q Consensus 243 ~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~---g~i~~~~~~~~~~~~l~~yd~~t~ 319 (355)
+|.+.++...++ .+.+|.+... ...|.....+.........+.+..+ +.+++. ...++ .+.+||++++
T Consensus 171 ~~~~l~~~~~dg----~i~i~d~~~~--~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s--~~~dg-~i~iwd~~~~ 241 (379)
T 3jrp_A 171 ESRKFVTGGADN----LVKIWKYNSD--AQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLAS--VSQDR-TCIIWTQDNE 241 (379)
T ss_dssp TTCEEEEEETTS----CEEEEEEETT--TTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEE--EETTS-CEEEEEESST
T ss_pred CCCEEEEEeCCC----eEEEEEecCC--CcceeeEEEEecccCcEeEEEECCCCCCCCeEEE--EeCCC-EEEEEeCCCC
Confidence 467767666654 8999999853 3457776666543323555666777 666766 43566 4899998886
Q ss_pred e
Q 018497 320 T 320 (355)
Q Consensus 320 ~ 320 (355)
.
T Consensus 242 ~ 242 (379)
T 3jrp_A 242 Q 242 (379)
T ss_dssp T
T ss_pred C
Confidence 3
No 29
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=96.17 E-value=0.51 Score=40.11 Aligned_cols=185 Identities=9% Similarity=-0.008 Sum_probs=95.7
Q ss_pred EEeeeCceEEEeecCCCCceEEEEcCCcccEEecCCCCCCCceeEEEEecCCCCCCcE-------EEE-EEcCCCceeEe
Q 018497 97 VVGSCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDF-------KVV-YSLRSNSWKNI 168 (355)
Q Consensus 97 ~~~s~~GLl~l~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~g~d~~~~~~~~y-------kvv-yss~t~~W~~~ 168 (355)
+.-..+|.|.+... ....++++|| +++...+..+.......++.+|+. ..-| .|. |+. ++..+..
T Consensus 104 i~~~~~g~l~v~~~--~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~---g~l~v~~~~~~~i~~~~~-~g~~~~~ 176 (299)
T 2z2n_A 104 ITEGPNGDIWFTEM--NGNRIGRITD-DGKIREYELPNKGSYPSFITLGSD---NALWFTENQNNAIGRITE-SGDITEF 176 (299)
T ss_dssp EEECTTSCEEEEET--TTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTT---SCEEEEETTTTEEEEECT-TCCEEEE
T ss_pred eEECCCCCEEEEec--CCceEEEECC-CCCEEEecCCCCCCCCceEEEcCC---CCEEEEeCCCCEEEEEcC-CCcEEEe
Confidence 33345677766653 4678999999 777665543322222356666654 3211 111 666 5666544
Q ss_pred ccCCCceeeeccccccceeEe--CceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEecCCCCCCCCCCceEEEEE-CCe
Q 018497 169 AYGFPRSIEINRSHINSSVFL--NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF-DGY 245 (355)
Q Consensus 169 ~~~~p~~~~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i~lP~~~~~~~~~~~L~~~-~G~ 245 (355)
. .+.... ... ++.+ +|.+|+..... ..|..||+ ++++..+.+| .... ....++.. +|+
T Consensus 177 ~--~~~~~~--~~~---~i~~~~~g~l~v~~~~~--------~~i~~~~~-~g~~~~~~~~-~~~~--~~~~i~~~~~g~ 237 (299)
T 2z2n_A 177 K--IPTPAS--GPV---GITKGNDDALWFVEIIG--------NKIGRITT-SGEITEFKIP-TPNA--RPHAITAGAGID 237 (299)
T ss_dssp E--CSSTTC--CEE---EEEECTTSSEEEEETTT--------TEEEEECT-TCCEEEEECS-STTC--CEEEEEECSTTC
T ss_pred e--CCCCCC--cce---eEEECCCCCEEEEccCC--------ceEEEECC-CCcEEEEECC-CCCC--CceeEEECCCCC
Confidence 3 111000 011 3333 57876655432 58999999 7777776555 3221 22334443 478
Q ss_pred EEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEE
Q 018497 246 LCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFK 322 (355)
Q Consensus 246 L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~~~ 322 (355)
|++..... ..+.++..+ .. ...+.++........+.+ .+|.|++. . ..+ .+..||+++++++
T Consensus 238 l~v~~~~~----~~i~~~d~~-----g~-~~~~~~~~~~~~~~~i~~-~~g~l~v~--~-~~~-~l~~~~~~~~~~~ 299 (299)
T 2z2n_A 238 LWFTEWGA----NKIGRLTSN-----NI-IEEYPIQIKSAEPHGICF-DGETIWFA--M-ECD-KIGKLTLIKDNME 299 (299)
T ss_dssp EEEEETTT----TEEEEEETT-----TE-EEEEECSSSSCCEEEEEE-CSSCEEEE--E-TTT-EEEEEEEC-----
T ss_pred EEEeccCC----ceEEEECCC-----Cc-eEEEeCCCCCCccceEEe-cCCCEEEE--e-cCC-cEEEEEcCcccCC
Confidence 87776443 355555431 11 122223321112344555 77889888 5 445 4999999988754
No 30
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=95.79 E-value=0.74 Score=38.83 Aligned_cols=115 Identities=11% Similarity=0.064 Sum_probs=73.9
Q ss_pred ee-EeCceEEEEEeeeccCCCCCCcEEEEEEcCCcee-eEecCCCCCCCCCCceEEEEECCeEEEEEecCCCCccEEEEE
Q 018497 186 SV-FLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIF-QTVMMPYDLSTDDADKYLNVFDGYLCVFATIPNNTFRSYELW 263 (355)
Q Consensus 186 ~v-~~~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~-~~i~lP~~~~~~~~~~~L~~~~G~L~~v~~~~~~~~~~l~iW 263 (355)
++ +.+|.||.-.+.. .+..|..+|+.+++. ..+++| ... ...-++..+++|+++...++ . +|
T Consensus 25 GL~~~~~~LyestG~~------g~S~v~~vD~~tgkv~~~~~l~-~~~---fgeGi~~~~~~ly~ltw~~~----~--v~ 88 (243)
T 3mbr_X 25 GLFYLRGHLYESTGET------GRSSVRKVDLETGRILQRAEVP-PPY---FGAGIVAWRDRLIQLTWRNH----E--GF 88 (243)
T ss_dssp EEEEETTEEEEEECCT------TSCEEEEEETTTCCEEEEEECC-TTC---CEEEEEEETTEEEEEESSSS----E--EE
T ss_pred cEEEECCEEEEECCCC------CCceEEEEECCCCCEEEEEeCC-CCc---ceeEEEEeCCEEEEEEeeCC----E--EE
Confidence 44 5566777655442 356899999998877 556887 543 34457778899999876543 4 45
Q ss_pred EeccCCCCCCeEEEEEecCCCceeEeEEEeeCC-cEEEEEEeeCCceEEEEEeCCCCeE-EEEEEe
Q 018497 264 VMKEYGLTESWTKLYTIEKPQRIWWPLGFTERG-KIFIRGECRHGGYGLLVYNPHSDTF-KCIGVH 327 (355)
Q Consensus 264 ~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g-~i~~~~~~~~~~~~l~~yd~~t~~~-~~v~~~ 327 (355)
+.+- ..-.++.+|+... ...+++.+| .+|+. . ... .+..+|++|.+. +.+.+.
T Consensus 89 v~D~----~tl~~~~ti~~~~---~Gwglt~dg~~L~vS--d-gs~-~l~~iDp~t~~~~~~I~V~ 143 (243)
T 3mbr_X 89 VYDL----ATLTPRARFRYPG---EGWALTSDDSHLYMS--D-GTA-VIRKLDPDTLQQVGSIKVT 143 (243)
T ss_dssp EEET----TTTEEEEEEECSS---CCCEEEECSSCEEEE--C-SSS-EEEEECTTTCCEEEEEECE
T ss_pred EEEC----CcCcEEEEEeCCC---CceEEeeCCCEEEEE--C-CCC-eEEEEeCCCCeEEEEEEEc
Confidence 5553 2346677777653 234555566 45555 4 334 699999999765 556554
No 31
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=95.69 E-value=0.91 Score=39.12 Aligned_cols=197 Identities=11% Similarity=0.095 Sum_probs=100.2
Q ss_pred eeCceEEEeecCCCCceEEEEcCCcccEEecCCCCCCCceeEEEEecCCCCCCcEE------EE-EEcCCCceeEeccCC
Q 018497 100 SCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFK------VV-YSLRSNSWKNIAYGF 172 (355)
Q Consensus 100 s~~GLl~l~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~g~d~~~~~~~~yk------vv-yss~t~~W~~~~~~~ 172 (355)
..+|-|++.+. ...+++.+||.+++...+..+. ...++.+++. .+ +- |. |+.++++++.+. ..
T Consensus 22 ~~~~~l~~~d~--~~~~i~~~d~~~~~~~~~~~~~---~~~~i~~~~d---G~-l~v~~~~~l~~~d~~~g~~~~~~-~~ 91 (297)
T 3g4e_A 22 EVSNSLLFVDI--PAKKVCRWDSFTKQVQRVTMDA---PVSSVALRQS---GG-YVATIGTKFCALNWKEQSAVVLA-TV 91 (297)
T ss_dssp TTTTEEEEEET--TTTEEEEEETTTCCEEEEECSS---CEEEEEEBTT---SS-EEEEETTEEEEEETTTTEEEEEE-EC
T ss_pred CCCCEEEEEEC--CCCEEEEEECCCCcEEEEeCCC---ceEEEEECCC---CC-EEEEECCeEEEEECCCCcEEEEE-ec
Confidence 33565655553 5678999999998776543321 1245666664 33 22 21 898888888765 32
Q ss_pred CceeeeccccccceeE--eCceEEEEEeeeccC---CCCCCcEEEEEEcCCceeeEe---cCCCCCCCCCCceEEEEE-C
Q 018497 173 PRSIEINRSHINSSVF--LNGSVHWCARFSCYH---DNSCPWLIVSFDFAKEIFQTV---MMPYDLSTDDADKYLNVF-D 243 (355)
Q Consensus 173 p~~~~~~~~~~~~~v~--~~G~lyw~~~~~~~~---~~~~~~~Il~fD~~~~~~~~i---~lP~~~~~~~~~~~L~~~-~ 243 (355)
+........+ .+. -+|.+|+-....... .......|..+|.....-... ..| -.++.. +
T Consensus 92 ~~~~~~~~~~---di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~p---------ngi~~spd 159 (297)
T 3g4e_A 92 DNDKKNNRFN---DGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDIS---------NGLDWSLD 159 (297)
T ss_dssp CTTCSSEEEE---EEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBE---------EEEEECTT
T ss_pred CCCCCCCCCC---CEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccc---------cceEEcCC
Confidence 2111111111 232 378876644332000 012345788888864322221 222 123333 3
Q ss_pred C-eEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEe-cCCCc--eeEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCC
Q 018497 244 G-YLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTI-EKPQR--IWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSD 319 (355)
Q Consensus 244 G-~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i-~~~~~--~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~ 319 (355)
| .|+++.... ..+.+|.++.. .........+ ..... ...-+++..+|.|++. ...++ .|..||++++
T Consensus 160 g~~lyv~~~~~----~~i~~~~~d~~--~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva--~~~~~-~v~~~d~~tG 230 (297)
T 3g4e_A 160 HKIFYYIDSLS----YSVDAFDYDLQ--TGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVA--CYNGG-RVIRLDPVTG 230 (297)
T ss_dssp SCEEEEEEGGG----TEEEEEEECTT--TCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEE--EETTT-EEEEECTTTC
T ss_pred CCEEEEecCCC----CcEEEEeccCC--CCcccCcEEEEECCCCCCCCCeeEECCCCCEEEE--EcCCC-EEEEEcCCCc
Confidence 5 466665543 36666655421 1223322211 11111 2233555667889888 52345 5999999966
Q ss_pred eE-EEEEEe
Q 018497 320 TF-KCIGVH 327 (355)
Q Consensus 320 ~~-~~v~~~ 327 (355)
++ ..+...
T Consensus 231 ~~~~~i~~p 239 (297)
T 3g4e_A 231 KRLQTVKLP 239 (297)
T ss_dssp CEEEEEECS
T ss_pred eEEEEEECC
Confidence 54 555554
No 32
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=95.67 E-value=1 Score=39.55 Aligned_cols=195 Identities=8% Similarity=0.025 Sum_probs=100.3
Q ss_pred CceEEEeecC--CCCceEEEEcCCcccEEe-cCC----CCCCCceeEEEEecCC-----CCCCcEEEEEEcCCCce-eEe
Q 018497 102 NGVLCFCSNG--SDRSLIYLWNPLIKKYMT-LPR----PSLNPRYLGFGVNSVS-----GHLDDFKVVYSLRSNSW-KNI 168 (355)
Q Consensus 102 ~GLl~l~~~~--~~~~~~~V~NP~T~~~~~-LP~----~~~~~~~~~~g~d~~~-----~~~~~ykvvyss~t~~W-~~~ 168 (355)
+|++.+.... .....+.++||.|++... ++. .+......++.++... ...+.-.+ +|..+++- +.+
T Consensus 2 ~g~~v~neg~~g~~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~~~~~~v~v-iD~~t~~~~~~i 80 (328)
T 3dsm_A 2 SGLFITNEGNFQYSNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVNNSHVIFA-IDINTFKEVGRI 80 (328)
T ss_dssp CEEEEEECCCTTSCCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEETTEEEEEEGGGTEEEE-EETTTCCEEEEE
T ss_pred CeEEEEecCCCCCCCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEECCEEEEEEcCCCEEEE-EECcccEEEEEc
Confidence 4666655421 236789999999998764 211 0111101223333210 00111111 77776654 223
Q ss_pred ccCCCceeeeccccccceeEeCceEEEEEeeeccCCCCCCcEEEEEEcCCceee-EecCCCCCCC-CCCceEEEEECCeE
Q 018497 169 AYGFPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQ-TVMMPYDLST-DDADKYLNVFDGYL 246 (355)
Q Consensus 169 ~~~~p~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~-~i~lP~~~~~-~~~~~~L~~~~G~L 246 (355)
+ .... . ..- .+.-+|.+|...... ..|.++|+.+.+.. .++++ .... ......++..+|+|
T Consensus 81 ~-~~~~-p--~~i----~~~~~g~lyv~~~~~--------~~v~~iD~~t~~~~~~i~~g-~~~~~~~~p~~i~~~~~~l 143 (328)
T 3dsm_A 81 T-GFTS-P--RYI----HFLSDEKAYVTQIWD--------YRIFIINPKTYEITGYIECP-DMDMESGSTEQMVQYGKYV 143 (328)
T ss_dssp E-CCSS-E--EEE----EEEETTEEEEEEBSC--------SEEEEEETTTTEEEEEEECT-TCCTTTCBCCCEEEETTEE
T ss_pred C-CCCC-C--cEE----EEeCCCeEEEEECCC--------CeEEEEECCCCeEEEEEEcC-CccccCCCcceEEEECCEE
Confidence 2 1111 1 100 222588988877333 48999999998875 45665 3110 00112344478899
Q ss_pred EEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEeEEEeeCCcEEEEEEeeCC---------ceEEEEEeCC
Q 018497 247 CVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHG---------GYGLLVYNPH 317 (355)
Q Consensus 247 ~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~---------~~~l~~yd~~ 317 (355)
++...... ..+.++-++. . ....+++... ...-+.+..+|++++. ...+ ...+..+|++
T Consensus 144 yv~~~~~~---~~v~viD~~t----~--~~~~~i~~g~-~p~~i~~~~dG~l~v~--~~~~~~~~~~~~~~~~v~~id~~ 211 (328)
T 3dsm_A 144 YVNCWSYQ---NRILKIDTET----D--KVVDELTIGI-QPTSLVMDKYNKMWTI--TDGGYEGSPYGYEAPSLYRIDAE 211 (328)
T ss_dssp EEEECTTC---CEEEEEETTT----T--EEEEEEECSS-CBCCCEECTTSEEEEE--BCCBCTTCSSCBCCCEEEEEETT
T ss_pred EEEcCCCC---CEEEEEECCC----C--eEEEEEEcCC-CccceEEcCCCCEEEE--ECCCccCCccccCCceEEEEECC
Confidence 88865212 3665555443 2 2233343322 1223556677898888 5222 1259999999
Q ss_pred CCeEE-EEEE
Q 018497 318 SDTFK-CIGV 326 (355)
Q Consensus 318 t~~~~-~v~~ 326 (355)
++++. .+.+
T Consensus 212 t~~v~~~~~~ 221 (328)
T 3dsm_A 212 TFTVEKQFKF 221 (328)
T ss_dssp TTEEEEEEEC
T ss_pred CCeEEEEEec
Confidence 99876 4444
No 33
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=95.55 E-value=0.32 Score=41.55 Aligned_cols=115 Identities=14% Similarity=0.072 Sum_probs=72.0
Q ss_pred eEeCceEEEEEeeeccCCCCCCcEEEEEEcCCcee-eEecCCCCCCCCCCceEEEEECCeEEEEEecCCCCccEEEEEEe
Q 018497 187 VFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIF-QTVMMPYDLSTDDADKYLNVFDGYLCVFATIPNNTFRSYELWVM 265 (355)
Q Consensus 187 v~~~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~-~~i~lP~~~~~~~~~~~L~~~~G~L~~v~~~~~~~~~~l~iW~l 265 (355)
.+.+|.||.-++.. .+..|..+|+.+.+. ..+++| ... +..-++..+++|+++...++ . +|+.
T Consensus 49 ~~~~~~LyestG~~------g~S~v~~vD~~Tgkv~~~~~l~-~~~---FgeGit~~g~~ly~ltw~~~----~--v~v~ 112 (262)
T 3nol_A 49 FYRNGYFYESTGLN------GRSSIRKVDIESGKTLQQIELG-KRY---FGEGISDWKDKIVGLTWKNG----L--GFVW 112 (262)
T ss_dssp EEETTEEEEEEEET------TEEEEEEECTTTCCEEEEEECC-TTC---CEEEEEEETTEEEEEESSSS----E--EEEE
T ss_pred EEECCEEEEECCCC------CCceEEEEECCCCcEEEEEecC-Ccc---ceeEEEEeCCEEEEEEeeCC----E--EEEE
Confidence 34578888766553 235899999998876 555777 432 33457778899999976543 4 4555
Q ss_pred ccCCCCCCeEEEEEecCCCceeEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeE-EEEEEe
Q 018497 266 KEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTF-KCIGVH 327 (355)
Q Consensus 266 ~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~~-~~v~~~ 327 (355)
+- ..-.++.+|+... ...++..+|+.++. . ++...+..+|++|.+. ..|.+.
T Consensus 113 D~----~t~~~~~ti~~~~---eG~glt~dg~~L~~--S-dGs~~i~~iDp~T~~v~~~I~V~ 165 (262)
T 3nol_A 113 NI----RNLRQVRSFNYDG---EGWGLTHNDQYLIM--S-DGTPVLRFLDPESLTPVRTITVT 165 (262)
T ss_dssp ET----TTCCEEEEEECSS---CCCCEEECSSCEEE--C-CSSSEEEEECTTTCSEEEEEECE
T ss_pred EC----ccCcEEEEEECCC---CceEEecCCCEEEE--E-CCCCeEEEEcCCCCeEEEEEEec
Confidence 53 2245666676543 22445556655555 3 3233699999998665 556553
No 34
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=95.28 E-value=1.5 Score=38.95 Aligned_cols=179 Identities=8% Similarity=0.000 Sum_probs=94.9
Q ss_pred CCceEEEEcCCcccEEecCCCCCC-CceeEEEEecCCCCCCcEEEE---------EEcCCCceeEeccCCCceeeecccc
Q 018497 113 DRSLIYLWNPLIKKYMTLPRPSLN-PRYLGFGVNSVSGHLDDFKVV---------YSLRSNSWKNIAYGFPRSIEINRSH 182 (355)
Q Consensus 113 ~~~~~~V~NP~T~~~~~LP~~~~~-~~~~~~g~d~~~~~~~~ykvv---------yss~t~~W~~~~~~~p~~~~~~~~~ 182 (355)
.++.+.|||..+++....-..... .....+.+.|. .+.+-+. ++.+++..+... ............
T Consensus 94 ~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~---~~~~l~s~~~d~~i~iwd~~~~~~~~~~-~~~~~~~~v~~~ 169 (383)
T 3ei3_B 94 KGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQF---NTNQLFVSSIRGATTLRDFSGSVIQVFA-KTDSWDYWYCCV 169 (383)
T ss_dssp BTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETT---EEEEEEEEETTTEEEEEETTSCEEEEEE-CCCCSSCCEEEE
T ss_pred CCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCC---CCCEEEEEeCCCEEEEEECCCCceEEEe-ccCCCCCCeEEE
Confidence 467899999998777655433222 22255556552 2111111 777766555554 211100000000
Q ss_pred ccceeEeCceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEecCCCCCCCCCCceEEEEEC-Ce-EEEEEecCCCCccEE
Q 018497 183 INSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVFD-GY-LCVFATIPNNTFRSY 260 (355)
Q Consensus 183 ~~~~v~~~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i~lP~~~~~~~~~~~L~~~~-G~-L~~v~~~~~~~~~~l 260 (355)
...-+|.....+..+ ..|..+|+..+....+... .. ....+.-.. |+ +.+.+..+ ..+
T Consensus 170 ---~~~~~~~~l~~~~~d--------~~i~i~d~~~~~~~~~~~h-~~----~v~~~~~~~~~~~~l~s~~~d----~~i 229 (383)
T 3ei3_B 170 ---DVSVSRQMLATGDST--------GRLLLLGLDGHEIFKEKLH-KA----KVTHAEFNPRCDWLMATSSVD----ATV 229 (383)
T ss_dssp ---EEETTTTEEEEEETT--------SEEEEEETTSCEEEEEECS-SS----CEEEEEECSSCTTEEEEEETT----SEE
T ss_pred ---EECCCCCEEEEECCC--------CCEEEEECCCCEEEEeccC-CC----cEEEEEECCCCCCEEEEEeCC----CEE
Confidence 223355544444433 5899999976665555422 11 112233222 55 66666655 499
Q ss_pred EEEEeccCCCCCCeEEEEEecCCCceeEeEEEee-CCcEEEEEEeeCCceEEEEEeCCCCeE
Q 018497 261 ELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTE-RGKIFIRGECRHGGYGLLVYNPHSDTF 321 (355)
Q Consensus 261 ~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~-~g~i~~~~~~~~~~~~l~~yd~~t~~~ 321 (355)
.+|.+....... .....+.... ....+.+.. +|..++. ...++ .+.+||+++.+.
T Consensus 230 ~iwd~~~~~~~~--~~~~~~~~~~-~v~~~~~s~~~~~~l~~--~~~d~-~i~iwd~~~~~~ 285 (383)
T 3ei3_B 230 KLWDLRNIKDKN--SYIAEMPHEK-PVNAAYFNPTDSTKLLT--TDQRN-EIRVYSSYDWSK 285 (383)
T ss_dssp EEEEGGGCCSTT--CEEEEEECSS-CEEEEEECTTTSCEEEE--EESSS-EEEEEETTBTTS
T ss_pred EEEeCCCCCccc--ceEEEecCCC-ceEEEEEcCCCCCEEEE--EcCCC-cEEEEECCCCcc
Confidence 999998632212 3333333322 355566777 7777776 43566 599999988654
No 35
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=95.02 E-value=0.46 Score=47.19 Aligned_cols=69 Identities=7% Similarity=0.154 Sum_probs=45.2
Q ss_pred CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEeEEEeeC---CcEEEEEEeeCCceEEEEEeCCCC
Q 018497 243 DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTER---GKIFIRGECRHGGYGLLVYNPHSD 319 (355)
Q Consensus 243 ~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~---g~i~~~~~~~~~~~~l~~yd~~t~ 319 (355)
+|.+.+++..++ .+.+|.+... ...+.....+.........+.+..+ |.+++. ...++ .+.+||++++
T Consensus 169 d~~~l~sgs~dg----~I~iwd~~~~--~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s--~s~Dg-~I~iwd~~~~ 239 (753)
T 3jro_A 169 ESRKFVTGGADN----LVKIWKYNSD--AQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLAS--VSQDR-TCIIWTQDNE 239 (753)
T ss_dssp GGCCEEEEETTS----CEEEEEEETT--TTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEE--EESSS-CEEEEEESSS
T ss_pred CCCEEEEEECCC----eEEEEeccCC--cccceeeeeecCCCCcEEEEEeccCCCCCCEEEE--EecCC-EEEEecCCCC
Confidence 366666666654 8999999863 2456666666543323555666777 777777 43566 4999999886
Q ss_pred e
Q 018497 320 T 320 (355)
Q Consensus 320 ~ 320 (355)
+
T Consensus 240 ~ 240 (753)
T 3jro_A 240 Q 240 (753)
T ss_dssp S
T ss_pred C
Confidence 3
No 36
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=94.85 E-value=0.64 Score=40.79 Aligned_cols=149 Identities=9% Similarity=-0.012 Sum_probs=79.6
Q ss_pred cEEEE-EEcCCCceeEeccCCCceeeeccccccceeEeCceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEecC-CCCC
Q 018497 153 DFKVV-YSLRSNSWKNIAYGFPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMM-PYDL 230 (355)
Q Consensus 153 ~ykvv-yss~t~~W~~~~~~~p~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i~l-P~~~ 230 (355)
...++ ++.++++++.+. .......... . .+.-+|.+|...... ....|..||+.+++.+.+.. + ..
T Consensus 17 ~i~v~~~d~~tg~~~~~~-~~~~~~~p~~-~---a~spdg~l~~~~~~~------~~~~v~~~~~~~g~~~~~~~~~-~~ 84 (347)
T 3hfq_A 17 GIYQGTLDTTAKTLTNDG-LLAATQNPTY-L---ALSAKDCLYSVDKED------DEGGIAAWQIDGQTAHKLNTVV-AP 84 (347)
T ss_dssp EEEEEEEETTTTEEEEEE-EEEECSCCCC-E---EECTTCEEEEEEEET------TEEEEEEEEEETTEEEEEEEEE-EE
T ss_pred CEEEEEEcCCCCeEEEee-eeeccCCcce-E---EEccCCeEEEEEecC------CCceEEEEEecCCcEEEeeeee-cC
Confidence 33444 777777776544 1111100000 0 223378888877631 12479999998888766632 2 11
Q ss_pred CCCCCceEEEEE-CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCc---------eeEeEEEeeCCcEEE
Q 018497 231 STDDADKYLNVF-DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQR---------IWWPLGFTERGKIFI 300 (355)
Q Consensus 231 ~~~~~~~~L~~~-~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~---------~~~~~~~~~~g~i~~ 300 (355)
.. ....++.. +|+..++..... ..+.+|.++.. ........+..... ....+++..+|++++
T Consensus 85 ~~--~p~~~a~spdg~~l~~~~~~~---~~v~v~~~~~~---g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v 156 (347)
T 3hfq_A 85 GT--PPAYVAVDEARQLVYSANYHK---GTAEVMKIAAD---GALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAV 156 (347)
T ss_dssp SC--CCSEEEEETTTTEEEEEETTT---TEEEEEEECTT---SCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEE
T ss_pred CC--CCEEEEECCCCCEEEEEeCCC---CEEEEEEeCCC---CCeeecceeecCCCCCCccccCCCceEEEECCCCcEEE
Confidence 11 12234433 466444444333 58999999752 23444444433210 133466777888666
Q ss_pred EEEeeCCceEEEEEeCC-CCeEEEE
Q 018497 301 RGECRHGGYGLLVYNPH-SDTFKCI 324 (355)
Q Consensus 301 ~~~~~~~~~~l~~yd~~-t~~~~~v 324 (355)
. ...++ .+.+||++ ++++..+
T Consensus 157 ~--~~~~~-~v~~~~~~~~g~~~~~ 178 (347)
T 3hfq_A 157 I--DLGSD-KVYVYNVSDAGQLSEQ 178 (347)
T ss_dssp E--ETTTT-EEEEEEECTTSCEEEE
T ss_pred E--eCCCC-EEEEEEECCCCcEEEe
Confidence 5 42344 58999988 6666544
No 37
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=94.75 E-value=2.2 Score=38.26 Aligned_cols=175 Identities=11% Similarity=0.028 Sum_probs=89.5
Q ss_pred CCceEEEEcCCcccEEecCCCCCCCceeEEEEecCCCCCC---------cEEEEEEcCCCceeEeccCCCceeeeccccc
Q 018497 113 DRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLD---------DFKVVYSLRSNSWKNIAYGFPRSIEINRSHI 183 (355)
Q Consensus 113 ~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~g~d~~~~~~~---------~ykvvyss~t~~W~~~~~~~p~~~~~~~~~~ 183 (355)
.++.+.|||..+++...+-..........+.+.+. +. ..++ |+.+++.-...- ..... .-.
T Consensus 111 ~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~---~~~l~~~~~dg~i~i-wd~~~~~~~~~~-~~~~~----~v~- 180 (401)
T 4aez_A 111 LERNVYVWNADSGSVSALAETDESTYVASVKWSHD---GSFLSVGLGNGLVDI-YDVESQTKLRTM-AGHQA----RVG- 180 (401)
T ss_dssp ETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTT---SSEEEEEETTSCEEE-EETTTCCEEEEE-CCCSS----CEE-
T ss_pred CCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCC---CCEEEEECCCCeEEE-EECcCCeEEEEe-cCCCC----ceE-
Confidence 47789999999998876554432222244555553 21 1121 666655432111 00000 001
Q ss_pred cceeEeCceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEecCCCCCCCCCCceEEEEE-CCeEEEEEecCCCCccEEEE
Q 018497 184 NSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF-DGYLCVFATIPNNTFRSYEL 262 (355)
Q Consensus 184 ~~~v~~~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i~lP~~~~~~~~~~~L~~~-~G~L~~v~~~~~~~~~~l~i 262 (355)
.+..+|.+...+..+ ..|..+|+.+..-....+. .... ....+.-. +|.+.+++..+ ..+.+
T Consensus 181 --~~~~~~~~l~~~~~d--------g~i~i~d~~~~~~~~~~~~-~~~~--~v~~~~~~~~~~~l~s~~~d----~~v~i 243 (401)
T 4aez_A 181 --CLSWNRHVLSSGSRS--------GAIHHHDVRIANHQIGTLQ-GHSS--EVCGLAWRSDGLQLASGGND----NVVQI 243 (401)
T ss_dssp --EEEEETTEEEEEETT--------SEEEEEETTSSSCEEEEEE-CCSS--CEEEEEECTTSSEEEEEETT----SCEEE
T ss_pred --EEEECCCEEEEEcCC--------CCEEEEecccCcceeeEEc-CCCC--CeeEEEEcCCCCEEEEEeCC----CeEEE
Confidence 444566655554443 6899999984332222221 1111 11223222 46666666655 48999
Q ss_pred EEeccCCCCCCeEEEEEecCCCceeEeEEEeeCC-cEEEEEEee--CCceEEEEEeCCCCeEEE
Q 018497 263 WVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERG-KIFIRGECR--HGGYGLLVYNPHSDTFKC 323 (355)
Q Consensus 263 W~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g-~i~~~~~~~--~~~~~l~~yd~~t~~~~~ 323 (355)
|-+... .....+.........+.+..++ .+++. .. .++ .+..||+++++...
T Consensus 244 wd~~~~------~~~~~~~~~~~~v~~~~~~p~~~~ll~~--~~gs~d~-~i~i~d~~~~~~~~ 298 (401)
T 4aez_A 244 WDARSS------IPKFTKTNHNAAVKAVAWCPWQSNLLAT--GGGTMDK-QIHFWNAATGARVN 298 (401)
T ss_dssp EETTCS------SEEEEECCCSSCCCEEEECTTSTTEEEE--ECCTTTC-EEEEEETTTCCEEE
T ss_pred ccCCCC------CccEEecCCcceEEEEEECCCCCCEEEE--ecCCCCC-EEEEEECCCCCEEE
Confidence 988751 2223332221124446666655 56666 41 355 59999998877533
No 38
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=94.21 E-value=1.5 Score=37.59 Aligned_cols=110 Identities=11% Similarity=0.080 Sum_probs=69.3
Q ss_pred ceEEEEEeeeccCCCCCCcEEEEEEcCCcee-eEecCCCCCCCCCCceEEEEECCeEEEEEecCCCCccEEEEEEeccCC
Q 018497 191 GSVHWCARFSCYHDNSCPWLIVSFDFAKEIF-QTVMMPYDLSTDDADKYLNVFDGYLCVFATIPNNTFRSYELWVMKEYG 269 (355)
Q Consensus 191 G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~-~~i~lP~~~~~~~~~~~L~~~~G~L~~v~~~~~~~~~~l~iW~l~~~~ 269 (355)
|.||.-.+.. ....|.++|+.+++. ..+++| ... ....++..+++|++....++ . +++.+-
T Consensus 32 g~Lyvstg~~------~~s~v~~iD~~tg~v~~~i~l~-~~~---fgeGi~~~g~~lyv~t~~~~----~--v~viD~-- 93 (266)
T 2iwa_A 32 DTLFESTGLY------GRSSVRQVALQTGKVENIHKMD-DSY---FGEGLTLLNEKLYQVVWLKN----I--GFIYDR-- 93 (266)
T ss_dssp TEEEEEECST------TTCEEEEEETTTCCEEEEEECC-TTC---CEEEEEEETTEEEEEETTCS----E--EEEEET--
T ss_pred CeEEEECCCC------CCCEEEEEECCCCCEEEEEecC-CCc---ceEEEEEeCCEEEEEEecCC----E--EEEEEC--
Confidence 6788765431 246899999998876 445776 432 22346666889999876543 4 455553
Q ss_pred CCCCeEEEEEecCC-CceeEeEEEeeCC-cEEEEEEeeCCceEEEEEeCCCCeE-EEEEEe
Q 018497 270 LTESWTKLYTIEKP-QRIWWPLGFTERG-KIFIRGECRHGGYGLLVYNPHSDTF-KCIGVH 327 (355)
Q Consensus 270 ~~~~W~~~~~i~~~-~~~~~~~~~~~~g-~i~~~~~~~~~~~~l~~yd~~t~~~-~~v~~~ 327 (355)
..-..+.+|+.. . ...+++.+| .+|+. . ... .+..+|++|.+. ..+.+.
T Consensus 94 --~t~~v~~~i~~g~~---~g~glt~Dg~~l~vs--~-gs~-~l~viD~~t~~v~~~I~Vg 145 (266)
T 2iwa_A 94 --RTLSNIKNFTHQMK---DGWGLATDGKILYGS--D-GTS-ILYEIDPHTFKLIKKHNVK 145 (266)
T ss_dssp --TTTEEEEEEECCSS---SCCEEEECSSSEEEE--C-SSS-EEEEECTTTCCEEEEEECE
T ss_pred --CCCcEEEEEECCCC---CeEEEEECCCEEEEE--C-CCC-eEEEEECCCCcEEEEEEEC
Confidence 234666777655 2 134556566 56655 4 344 699999999764 556554
No 39
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=94.19 E-value=2.8 Score=37.11 Aligned_cols=187 Identities=9% Similarity=-0.017 Sum_probs=93.4
Q ss_pred EEeeeCc-eEEEeecCCCCceEEEEcCCcccEEecCCCCCCCceeEEEEecCCCCCCcE--------EEE-EEcCCCcee
Q 018497 97 VVGSCNG-VLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDF--------KVV-YSLRSNSWK 166 (355)
Q Consensus 97 ~~~s~~G-Ll~l~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~g~d~~~~~~~~y--------kvv-yss~t~~W~ 166 (355)
+.-+.+| .|++... .++.+.+||+.+++....-.... ....+.++|. .... .|. |+..++.-.
T Consensus 37 ~~~s~dg~~l~~~~~--~d~~i~v~d~~~~~~~~~~~~~~--~v~~~~~spd---g~~l~~~~~~~~~v~v~d~~~~~~~ 109 (391)
T 1l0q_A 37 AVISPDGTKVYVANA--HSNDVSIIDTATNNVIATVPAGS--SPQGVAVSPD---GKQVYVTNMASSTLSVIDTTSNTVA 109 (391)
T ss_dssp EEECTTSSEEEEEEG--GGTEEEEEETTTTEEEEEEECSS--SEEEEEECTT---SSEEEEEETTTTEEEEEETTTTEEE
T ss_pred EEECCCCCEEEEECC--CCCeEEEEECCCCeEEEEEECCC--CccceEECCC---CCEEEEEECCCCEEEEEECCCCeEE
Confidence 3344455 3444442 46789999999987765332222 1234445443 2111 111 777766443
Q ss_pred EeccCCCceeeeccccccceeEeCce-EEEEEeeeccCCCCCCcEEEEEEcCCceeeEe-cCCCCCCCCCCceEEEEE-C
Q 018497 167 NIAYGFPRSIEINRSHINSSVFLNGS-VHWCARFSCYHDNSCPWLIVSFDFAKEIFQTV-MMPYDLSTDDADKYLNVF-D 243 (355)
Q Consensus 167 ~~~~~~p~~~~~~~~~~~~~v~~~G~-lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i-~lP~~~~~~~~~~~L~~~-~ 243 (355)
..- ...... . .. ...-+|. +|...... ..|..+|+.+.+.... ... .. ...+... +
T Consensus 110 ~~~-~~~~~~--~-~~---~~s~dg~~l~~~~~~~--------~~v~~~d~~~~~~~~~~~~~-~~-----~~~~~~~~d 168 (391)
T 1l0q_A 110 GTV-KTGKSP--L-GL---ALSPDGKKLYVTNNGD--------KTVSVINTVTKAVINTVSVG-RS-----PKGIAVTPD 168 (391)
T ss_dssp EEE-ECSSSE--E-EE---EECTTSSEEEEEETTT--------TEEEEEETTTTEEEEEEECC-SS-----EEEEEECTT
T ss_pred EEE-eCCCCc--c-eE---EECCCCCEEEEEeCCC--------CEEEEEECCCCcEEEEEecC-CC-----cceEEECCC
Confidence 222 111111 0 00 2223565 44444332 5899999988776443 322 11 1223222 3
Q ss_pred CeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEeEEEeeCCcEEEEEEee--CCceEEEEEeCCCCeE
Q 018497 244 GYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECR--HGGYGLLVYNPHSDTF 321 (355)
Q Consensus 244 G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~--~~~~~l~~yd~~t~~~ 321 (355)
|+..++....+ ..+.+|-++. ......+.... ....+++..+|+.++.+ .. .++ .+..||+++++.
T Consensus 169 g~~l~~~~~~~---~~v~~~d~~~------~~~~~~~~~~~-~~~~~~~~~~g~~l~~~-~~~~~~~-~v~~~d~~~~~~ 236 (391)
T 1l0q_A 169 GTKVYVANFDS---MSISVIDTVT------NSVIDTVKVEA-APSGIAVNPEGTKAYVT-NVDKYFN-TVSMIDTGTNKI 236 (391)
T ss_dssp SSEEEEEETTT---TEEEEEETTT------TEEEEEEECSS-EEEEEEECTTSSEEEEE-EECSSCC-EEEEEETTTTEE
T ss_pred CCEEEEEeCCC---CEEEEEECCC------CeEEEEEecCC-CccceEECCCCCEEEEE-ecCcCCC-cEEEEECCCCeE
Confidence 54443343333 5899998764 23334444332 23445666677555541 21 244 599999998875
Q ss_pred EE
Q 018497 322 KC 323 (355)
Q Consensus 322 ~~ 323 (355)
..
T Consensus 237 ~~ 238 (391)
T 1l0q_A 237 TA 238 (391)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 40
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=94.08 E-value=2.9 Score=36.88 Aligned_cols=100 Identities=11% Similarity=-0.023 Sum_probs=54.6
Q ss_pred cEEEEEEcCCceee-EecCCCCCCCCCCceEEEEE--CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCc
Q 018497 209 WLIVSFDFAKEIFQ-TVMMPYDLSTDDADKYLNVF--DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQR 285 (355)
Q Consensus 209 ~~Il~fD~~~~~~~-~i~lP~~~~~~~~~~~L~~~--~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~ 285 (355)
..|..+|+.+.+-. .+..+ .... ....+.-. ++++.+.+..+ ..+.||-++.. ..+.++.....
T Consensus 192 ~~v~iwd~~~~~~~~~~~~~-~~~~--~~~~~~~~p~~~~~l~sg~~d----g~v~~wd~~~~------~~~~~~~~h~~ 258 (344)
T 4gqb_B 192 NRILLWDTRCPKPASQIGCS-APGY--LPTSLAWHPQQSEVFVFGDEN----GTVSLVDTKST------SCVLSSAVHSQ 258 (344)
T ss_dssp SCEEEEETTSSSCEEECC-----CC--CEEEEEECSSCTTEEEEEETT----SEEEEEESCC--------CCEEEECCSS
T ss_pred cccccccccccceeeeeecc-eeec--cceeeeecCCCCcceEEeccC----CcEEEEECCCC------cEEEEEcCCCC
Confidence 47888999876543 33322 1111 11223322 45666666655 49999987641 12233332221
Q ss_pred eeEeEEEeeCC-cEEEEEEeeCCceEEEEEeCCCCeEEEE
Q 018497 286 IWWPLGFTERG-KIFIRGECRHGGYGLLVYNPHSDTFKCI 324 (355)
Q Consensus 286 ~~~~~~~~~~g-~i~~~~~~~~~~~~l~~yd~~t~~~~~v 324 (355)
....+++..+| .+++. ...++ .+.+||.+++++..+
T Consensus 259 ~v~~v~fsp~g~~~las--gs~D~-~i~vwd~~~~~~~~~ 295 (344)
T 4gqb_B 259 CVTGLVFSPHSVPFLAS--LSEDC-SLAVLDSSLSELFRS 295 (344)
T ss_dssp CEEEEEECSSSSCCEEE--EETTS-CEEEECTTCCEEEEE
T ss_pred CEEEEEEccCCCeEEEE--EeCCC-eEEEEECCCCcEEEE
Confidence 34556667676 45555 32667 499999999986544
No 41
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=94.07 E-value=0.87 Score=38.91 Aligned_cols=111 Identities=11% Similarity=-0.007 Sum_probs=69.4
Q ss_pred EeCceEEEEEeeeccCCCCCCcEEEEEEcCCcee-eEecCCCCCCCCCCceEEEEECCeEEEEEecCCCCccEEEEEEec
Q 018497 188 FLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIF-QTVMMPYDLSTDDADKYLNVFDGYLCVFATIPNNTFRSYELWVMK 266 (355)
Q Consensus 188 ~~~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~-~~i~lP~~~~~~~~~~~L~~~~G~L~~v~~~~~~~~~~l~iW~l~ 266 (355)
+.++.||.-.+.. ..|..+|+++++. ..+ +| ... +..-++..+++|+++...++ . +|+.+
T Consensus 62 ~~~~~Ly~stG~~--------g~v~~iD~~Tgkv~~~~-l~-~~~---FgeGit~~g~~Ly~ltw~~~----~--v~V~D 122 (268)
T 3nok_A 62 FHQGHFFESTGHQ--------GTLRQLSLESAQPVWME-RL-GNI---FAEGLASDGERLYQLTWTEG----L--LFTWS 122 (268)
T ss_dssp EETTEEEEEETTT--------TEEEECCSSCSSCSEEE-EC-TTC---CEEEEEECSSCEEEEESSSC----E--EEEEE
T ss_pred EECCEEEEEcCCC--------CEEEEEECCCCcEEeEE-CC-CCc---ceeEEEEeCCEEEEEEccCC----E--EEEEE
Confidence 4566777766554 4599999998876 445 66 432 23346777899999876543 3 45555
Q ss_pred cCCCCCCeEEEEEecCCCceeEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeE-EEEEEe
Q 018497 267 EYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTF-KCIGVH 327 (355)
Q Consensus 267 ~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~~-~~v~~~ 327 (355)
- ..-.++.+|+.... ..+++.+|+.++. ..... .+..+|++|.+. +.|.+.
T Consensus 123 ~----~Tl~~~~ti~~~~e---GwGLt~Dg~~L~v--SdGs~-~l~~iDp~T~~v~~~I~V~ 174 (268)
T 3nok_A 123 G----MPPQRERTTRYSGE---GWGLCYWNGKLVR--SDGGT-MLTFHEPDGFALVGAVQVK 174 (268)
T ss_dssp T----TTTEEEEEEECSSC---CCCEEEETTEEEE--ECSSS-EEEEECTTTCCEEEEEECE
T ss_pred C----CcCcEEEEEeCCCc---eeEEecCCCEEEE--ECCCC-EEEEEcCCCCeEEEEEEeC
Confidence 3 23466677776531 2445555655554 31334 699999999765 556553
No 42
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=94.00 E-value=1.1 Score=39.76 Aligned_cols=179 Identities=14% Similarity=0.086 Sum_probs=81.0
Q ss_pred CCceEEEEcCCcccEEecCCCCCCCc-eeEEEEecCCCCCC---------cEEEEEEcCCCc-eeEeccCCCceeeeccc
Q 018497 113 DRSLIYLWNPLIKKYMTLPRPSLNPR-YLGFGVNSVSGHLD---------DFKVVYSLRSNS-WKNIAYGFPRSIEINRS 181 (355)
Q Consensus 113 ~~~~~~V~NP~T~~~~~LP~~~~~~~-~~~~g~d~~~~~~~---------~ykvvyss~t~~-W~~~~~~~p~~~~~~~~ 181 (355)
.++.+.|||..++++..+-....... ...+.+.+. +. ..++ |+..++. |+... ..........
T Consensus 31 ~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~---~~~l~s~s~d~~v~v-wd~~~~~~~~~~~-~~~~~~~~v~- 104 (377)
T 3dwl_C 31 ATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPK---SNRIVTCSQDRNAYV-YEKRPDGTWKQTL-VLLRLNRAAT- 104 (377)
T ss_dssp SSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTT---TCCEEEEETTSSEEE-C------CCCCEE-ECCCCSSCEE-
T ss_pred CCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCC---CCEEEEEeCCCeEEE-EEcCCCCceeeee-EecccCCceE-
Confidence 46678889988876555444433322 245555554 22 1221 6666554 44333 1111000000
Q ss_pred cccceeE--eCceEEEEEeeeccCCCCCCcEEEEEEcCCce----eeEecCCCCCCCCCCceEEEEE-CCeEEEEEecCC
Q 018497 182 HINSSVF--LNGSVHWCARFSCYHDNSCPWLIVSFDFAKEI----FQTVMMPYDLSTDDADKYLNVF-DGYLCVFATIPN 254 (355)
Q Consensus 182 ~~~~~v~--~~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~----~~~i~lP~~~~~~~~~~~L~~~-~G~L~~v~~~~~ 254 (355)
.+. -+|.....+..+ ..|..+|+.+++ ...+.-| .. .....+.-. +|++.+....+
T Consensus 105 ----~~~~~~~~~~l~~~~~d--------~~i~iwd~~~~~~~~~~~~~~~~--h~--~~v~~~~~~~~~~~l~~~~~d- 167 (377)
T 3dwl_C 105 ----FVRWSPNEDKFAVGSGA--------RVISVCYFEQENDWWVSKHLKRP--LR--STILSLDWHPNNVLLAAGCAD- 167 (377)
T ss_dssp ----EEECCTTSSCCEEEESS--------SCEEECCC-----CCCCEEECSS--CC--SCEEEEEECTTSSEEEEEESS-
T ss_pred ----EEEECCCCCEEEEEecC--------CeEEEEEECCcccceeeeEeecc--cC--CCeEEEEEcCCCCEEEEEeCC-
Confidence 121 145444433332 468888988765 2333322 11 112233333 46666666655
Q ss_pred CCccEEEEEEeccCC-----CCCCe-------EEEEEecCCCceeEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeE
Q 018497 255 NTFRSYELWVMKEYG-----LTESW-------TKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTF 321 (355)
Q Consensus 255 ~~~~~l~iW~l~~~~-----~~~~W-------~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~~ 321 (355)
..+.+|.++... ....| .....+.... ....+.+..+|..++. ...++ .+.+||+++++.
T Consensus 168 ---~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~sp~~~~l~~--~~~d~-~i~iwd~~~~~~ 239 (377)
T 3dwl_C 168 ---RKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGG-WVHAVGFSPSGNALAY--AGHDS-SVTIAYPSAPEQ 239 (377)
T ss_dssp ---SCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSS-SEEEEEECTTSSCEEE--EETTT-EEC-CEECSTTS
T ss_pred ---CEEEEEEEEecccCCCccccccccccchhhhhhcccCCc-eEEEEEECCCCCEEEE--EeCCC-cEEEEECCCCCC
Confidence 489999986321 11122 2222331111 3455666777876665 32666 499999988764
No 43
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=93.98 E-value=2.9 Score=36.52 Aligned_cols=194 Identities=10% Similarity=0.035 Sum_probs=90.7
Q ss_pred eCceEEEeecCCCCceEEEEcCCcccE---EecCCCCCCCceeEEEEecCC------CCCCcEEEEEEcCCCceeEeccC
Q 018497 101 CNGVLCFCSNGSDRSLIYLWNPLIKKY---MTLPRPSLNPRYLGFGVNSVS------GHLDDFKVVYSLRSNSWKNIAYG 171 (355)
Q Consensus 101 ~~GLl~l~~~~~~~~~~~V~NP~T~~~---~~LP~~~~~~~~~~~g~d~~~------~~~~~ykvvyss~t~~W~~~~~~ 171 (355)
.+|-+++... .++.+.|||..++++ ..+..... ....+.+.+.. +..+..++ |+.+++.+......
T Consensus 18 ~~~~~l~~~~--~d~~v~i~~~~~~~~~~~~~~~~h~~--~v~~~~~~~~~~~l~~~~~dg~i~v-wd~~~~~~~~~~~~ 92 (372)
T 1k8k_C 18 KDRTQIAICP--NNHEVHIYEKSGNKWVQVHELKEHNG--QVTGVDWAPDSNRIVTCGTDRNAYV-WTLKGRTWKPTLVI 92 (372)
T ss_dssp TTSSEEEEEC--SSSEEEEEEEETTEEEEEEEEECCSS--CEEEEEEETTTTEEEEEETTSCEEE-EEEETTEEEEEEEC
T ss_pred CCCCEEEEEe--CCCEEEEEeCCCCcEEeeeeecCCCC--cccEEEEeCCCCEEEEEcCCCeEEE-EECCCCeeeeeEEe
Confidence 3444443332 467888999888853 33332111 12445555430 00111221 77777776544311
Q ss_pred CCceeeeccccccceeEeCceEEEEEeeeccCCCCCCcEEEEEEcCCce-e---eEecCCCCCCCCCCceEEEEE-CCeE
Q 018497 172 FPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEI-F---QTVMMPYDLSTDDADKYLNVF-DGYL 246 (355)
Q Consensus 172 ~p~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~-~---~~i~lP~~~~~~~~~~~L~~~-~G~L 246 (355)
.......... ...-+|.....+... ..|..+|+.+.. + ..+..+ . . .....+.-. +|++
T Consensus 93 ~~~~~~v~~~----~~~~~~~~l~~~~~d--------~~v~i~d~~~~~~~~~~~~~~~~-~-~--~~i~~~~~~~~~~~ 156 (372)
T 1k8k_C 93 LRINRAARCV----RWAPNEKKFAVGSGS--------RVISICYFEQENDWWVCKHIKKP-I-R--STVLSLDWHPNSVL 156 (372)
T ss_dssp CCCSSCEEEE----EECTTSSEEEEEETT--------SSEEEEEEETTTTEEEEEEECTT-C-C--SCEEEEEECTTSSE
T ss_pred ecCCCceeEE----EECCCCCEEEEEeCC--------CEEEEEEecCCCcceeeeeeecc-c-C--CCeeEEEEcCCCCE
Confidence 1111000000 112245544444432 357777776554 2 222222 1 1 112233333 4666
Q ss_pred EEEEecCCCCccEEEEEEeccCC-----CCC-------CeEEEEEecCCCceeEeEEEeeCCcEEEEEEeeCCceEEEEE
Q 018497 247 CVFATIPNNTFRSYELWVMKEYG-----LTE-------SWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVY 314 (355)
Q Consensus 247 ~~v~~~~~~~~~~l~iW~l~~~~-----~~~-------~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~y 314 (355)
.++...+ ..+.+|.+.... ... .-..+..+.........+.+..+|..++. ...++ .+..|
T Consensus 157 l~~~~~d----g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~--~~~d~-~i~i~ 229 (372)
T 1k8k_C 157 LAAGSCD----FKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAW--VSHDS-TVCLA 229 (372)
T ss_dssp EEEEETT----SCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEE--EETTT-EEEEE
T ss_pred EEEEcCC----CCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEE--EeCCC-EEEEE
Confidence 6666555 489999975211 001 12333444322213445666677766666 43666 49999
Q ss_pred eCCCCeEE
Q 018497 315 NPHSDTFK 322 (355)
Q Consensus 315 d~~t~~~~ 322 (355)
|+++++..
T Consensus 230 d~~~~~~~ 237 (372)
T 1k8k_C 230 DADKKMAV 237 (372)
T ss_dssp EGGGTTEE
T ss_pred ECCCCcee
Confidence 99877643
No 44
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=93.90 E-value=0.83 Score=41.76 Aligned_cols=179 Identities=12% Similarity=0.060 Sum_probs=86.0
Q ss_pred CCceEEEEcCCcccEEecCCCCCC-CceeEEEEecCCCCCCcEEEE---------EEcCCCceeEeccCCCceeeecccc
Q 018497 113 DRSLIYLWNPLIKKYMTLPRPSLN-PRYLGFGVNSVSGHLDDFKVV---------YSLRSNSWKNIAYGFPRSIEINRSH 182 (355)
Q Consensus 113 ~~~~~~V~NP~T~~~~~LP~~~~~-~~~~~~g~d~~~~~~~~ykvv---------yss~t~~W~~~~~~~p~~~~~~~~~ 182 (355)
.++.+.|||..+++...+-..... .....+.|.|. .+.+-+. +|.+++.-+... ............
T Consensus 140 ~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~---~~~~l~s~s~D~~v~iwd~~~~~~~~~~-~~~~~~~~~~~~ 215 (435)
T 4e54_B 140 KGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPL---NTNQFYASSMEGTTRLQDFKGNILRVFA-SSDTINIWFCSL 215 (435)
T ss_dssp TTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSS---CTTEEEEECSSSCEEEEETTSCEEEEEE-CCSSCSCCCCCE
T ss_pred CCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCC---CCCEEEEEeCCCEEEEeeccCCceeEEe-ccCCCCccEEEE
Confidence 578899999998765443222221 12256666664 3222111 666665544433 111100000000
Q ss_pred ccceeEeCceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEecCCCCCCCCCCceEEEEE-CCe-EEEEEecCCCCccEE
Q 018497 183 INSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF-DGY-LCVFATIPNNTFRSY 260 (355)
Q Consensus 183 ~~~~v~~~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i~lP~~~~~~~~~~~L~~~-~G~-L~~v~~~~~~~~~~l 260 (355)
...-+|.+...+... ..|..+|+.++....+... . .....+.-. +|. +.+.+..+ ..+
T Consensus 216 ---~~~~~~~~l~~g~~d--------g~i~~wd~~~~~~~~~~~h---~--~~v~~v~~~p~~~~~~~s~s~d----~~v 275 (435)
T 4e54_B 216 ---DVSASSRMVVTGDNV--------GNVILLNMDGKELWNLRMH---K--KKVTHVALNPCCDWFLATASVD----QTV 275 (435)
T ss_dssp ---EEETTTTEEEEECSS--------SBEEEEESSSCBCCCSBCC---S--SCEEEEEECTTCSSEEEEEETT----SBC
T ss_pred ---EECCCCCEEEEEeCC--------CcEeeeccCcceeEEEecc---c--ceEEeeeecCCCceEEEEecCc----cee
Confidence 222356555554443 5788899876543332211 1 111222222 344 54445544 489
Q ss_pred EEEEeccCCCCCCeEEEEEecCCCceeEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeE
Q 018497 261 ELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTF 321 (355)
Q Consensus 261 ~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~~ 321 (355)
.||-+........... ...... ....+++..+|..++. ...++ .+.+||.++...
T Consensus 276 ~iwd~~~~~~~~~~~~--~~~h~~-~v~~~~~spdg~~l~s--~~~D~-~i~iwd~~~~~~ 330 (435)
T 4e54_B 276 KIWDLRQVRGKASFLY--SLPHRH-PVNAACFSPDGARLLT--TDQKS-EIRVYSASQWDC 330 (435)
T ss_dssp CEEETTTCCSSSCCSB--CCBCSS-CEEECCBCTTSSEEEE--EESSS-CEEEEESSSSSS
T ss_pred eEEecccccccceEEE--eeeccc-cccceeECCCCCeeEE--EcCCC-EEEEEECCCCcc
Confidence 9998875321111100 001111 2333455567766666 43666 499999987654
No 45
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=93.83 E-value=3.6 Score=37.11 Aligned_cols=191 Identities=14% Similarity=0.105 Sum_probs=94.1
Q ss_pred eeCceEEEeecCCCCceEEEEcCCcccEEecCCCCCCCce-eEEEEecCCCCCCcEEEE---------EEcCCCceeEec
Q 018497 100 SCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRY-LGFGVNSVSGHLDDFKVV---------YSLRSNSWKNIA 169 (355)
Q Consensus 100 s~~GLl~l~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~-~~~g~d~~~~~~~~ykvv---------yss~t~~W~~~~ 169 (355)
|.+++|-..- ++.++|||..|++...+-........ ..+.+.+. + .+-++ |+.++++-...-
T Consensus 114 S~~n~lAvgl----d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspd---g-~~lasgs~Dg~v~iWd~~~~~~~~~~ 185 (420)
T 4gga_A 114 SSGNVLAVAL----DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKE---G-NYLAVGTSSAEVQLWDVQQQKRLRNM 185 (420)
T ss_dssp CTTSEEEEEE----TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTT---S-SEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred CCCCEEEEEe----CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCC---C-CEEEEEECCCeEEEEEcCCCcEEEEE
Confidence 3456554433 67899999999988765444333222 45666653 2 22222 666655321111
Q ss_pred cCCCceeeeccccccceeEeCceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEecCCCCCCCCCCceEEEE-ECCeEEE
Q 018497 170 YGFPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNV-FDGYLCV 248 (355)
Q Consensus 170 ~~~p~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i~lP~~~~~~~~~~~L~~-~~G~L~~ 248 (355)
.... .... .+..+|.+...+... ..+..+|..........+. .... ....+.. .+|+..+
T Consensus 186 -~~h~----~~v~---~~s~~~~~l~sgs~d--------~~i~~~d~~~~~~~~~~~~-~h~~--~~~~~~~~~~g~~l~ 246 (420)
T 4gga_A 186 -TSHS----ARVG---SLSWNSYILSSGSRS--------GHIHHHDVRVAEHHVATLS-GHSQ--EVCGLRWAPDGRHLA 246 (420)
T ss_dssp -CCCS----SCEE---EEEEETTEEEEEETT--------SEEEEEETTSSSCEEEEEE-CCSS--CEEEEEECTTSSEEE
T ss_pred -eCCC----CceE---EEeeCCCEEEEEeCC--------CceeEeeecccceeeEEec-cccc--ceeeeeecCCCCeee
Confidence 0000 0011 455566554444433 5788888776544333222 2211 1122222 2366666
Q ss_pred EEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEeEEEeeCC-cEEEEEEeeCCceEEEEEeCCCCeEEEE
Q 018497 249 FATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERG-KIFIRGECRHGGYGLLVYNPHSDTFKCI 324 (355)
Q Consensus 249 v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g-~i~~~~~~~~~~~~l~~yd~~t~~~~~v 324 (355)
....+ ..+.||...... ..+...............+++...+ .++..+....++ .+.+||..+++....
T Consensus 247 s~~~D----~~v~i~~~~~~~--~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~-~I~iwd~~t~~~~~~ 316 (420)
T 4gga_A 247 SGGND----NLVNVWPSAPGE--GGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDR-HIRIWNVCSGACLSA 316 (420)
T ss_dssp EEETT----SCEEEEESSCCS--SCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTC-EEEEEETTTTEEEEE
T ss_pred eeecc----ccceEEeecccc--ccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCC-EEEEEeCCcccccee
Confidence 56555 488999887532 2222222222111123344444433 555542121345 588999998876544
No 46
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=93.80 E-value=3.4 Score=36.60 Aligned_cols=180 Identities=10% Similarity=-0.001 Sum_probs=91.0
Q ss_pred eEEEeecCCCCceEEEEcCCcccEEecCCCCCCCceeEEEEecCCCCCCcE--------EEE-EEcCCCceeEeccCCCc
Q 018497 104 VLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDF--------KVV-YSLRSNSWKNIAYGFPR 174 (355)
Q Consensus 104 Ll~l~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~g~d~~~~~~~~y--------kvv-yss~t~~W~~~~~~~p~ 174 (355)
.+++... .++.+.+||..+++....-..... ...+.+.+. +... .|. ++.++++-...- ..+.
T Consensus 3 ~l~vs~~--~d~~v~v~d~~~~~~~~~~~~~~~--~~~~~~s~d---g~~l~~~~~~d~~i~v~d~~~~~~~~~~-~~~~ 74 (391)
T 1l0q_A 3 FAYIANS--ESDNISVIDVTSNKVTATIPVGSN--PMGAVISPD---GTKVYVANAHSNDVSIIDTATNNVIATV-PAGS 74 (391)
T ss_dssp EEEEEET--TTTEEEEEETTTTEEEEEEECSSS--EEEEEECTT---SSEEEEEEGGGTEEEEEETTTTEEEEEE-ECSS
T ss_pred EEEEEcC--CCCEEEEEECCCCeEEEEeecCCC--cceEEECCC---CCEEEEECCCCCeEEEEECCCCeEEEEE-ECCC
Confidence 4445543 577899999998877643222211 234445443 2211 111 777766543222 1111
Q ss_pred eeeeccccccceeEeCce-EEEEEeeeccCCCCCCcEEEEEEcCCceeeEe-cCCCCCCCCCCceEEEEE-CCeEEEEEe
Q 018497 175 SIEINRSHINSSVFLNGS-VHWCARFSCYHDNSCPWLIVSFDFAKEIFQTV-MMPYDLSTDDADKYLNVF-DGYLCVFAT 251 (355)
Q Consensus 175 ~~~~~~~~~~~~v~~~G~-lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i-~lP~~~~~~~~~~~L~~~-~G~L~~v~~ 251 (355)
..... ...-+|. +|..... ...|..+|+.+++.... ... . ....+... +|+..++..
T Consensus 75 ~v~~~------~~spdg~~l~~~~~~--------~~~v~v~d~~~~~~~~~~~~~-~-----~~~~~~~s~dg~~l~~~~ 134 (391)
T 1l0q_A 75 SPQGV------AVSPDGKQVYVTNMA--------SSTLSVIDTTSNTVAGTVKTG-K-----SPLGLALSPDGKKLYVTN 134 (391)
T ss_dssp SEEEE------EECTTSSEEEEEETT--------TTEEEEEETTTTEEEEEEECS-S-----SEEEEEECTTSSEEEEEE
T ss_pred Cccce------EECCCCCEEEEEECC--------CCEEEEEECCCCeEEEEEeCC-C-----CcceEEECCCCCEEEEEe
Confidence 11000 1222455 4444333 25899999998776443 332 1 11233333 355443333
Q ss_pred cCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEeEEEeeCCc-EEEEEEeeCCceEEEEEeCCCCeEEEE
Q 018497 252 IPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGK-IFIRGECRHGGYGLLVYNPHSDTFKCI 324 (355)
Q Consensus 252 ~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~-i~~~~~~~~~~~~l~~yd~~t~~~~~v 324 (355)
... ..+.+|.++. . .....+.... ....+.+..+|+ +++. ...++ .+..||+++++....
T Consensus 135 ~~~---~~v~~~d~~~----~--~~~~~~~~~~-~~~~~~~~~dg~~l~~~--~~~~~-~v~~~d~~~~~~~~~ 195 (391)
T 1l0q_A 135 NGD---KTVSVINTVT----K--AVINTVSVGR-SPKGIAVTPDGTKVYVA--NFDSM-SISVIDTVTNSVIDT 195 (391)
T ss_dssp TTT---TEEEEEETTT----T--EEEEEEECCS-SEEEEEECTTSSEEEEE--ETTTT-EEEEEETTTTEEEEE
T ss_pred CCC---CEEEEEECCC----C--cEEEEEecCC-CcceEEECCCCCEEEEE--eCCCC-EEEEEECCCCeEEEE
Confidence 333 5899997764 2 2223333222 234466667775 4455 42455 599999999876543
No 47
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=93.58 E-value=3.7 Score=36.38 Aligned_cols=186 Identities=11% Similarity=0.064 Sum_probs=92.4
Q ss_pred EEeeeCceEEEeecCCCCceEEEEcCCcccEEe---cCCCCCC-Cce----eEEEEecCCCCCCcEEEE-EEcCCC--ce
Q 018497 97 VVGSCNGVLCFCSNGSDRSLIYLWNPLIKKYMT---LPRPSLN-PRY----LGFGVNSVSGHLDDFKVV-YSLRSN--SW 165 (355)
Q Consensus 97 ~~~s~~GLl~l~~~~~~~~~~~V~NP~T~~~~~---LP~~~~~-~~~----~~~g~d~~~~~~~~ykvv-yss~t~--~W 165 (355)
.....+|.|.+.. ....++.+|+.|++.+. ++..... +.. +.++. . +-.|. ||.+++ .|
T Consensus 98 ~~~~~~~~v~v~~---~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~~~~v~v~~------~-~g~l~~~d~~tG~~~W 167 (376)
T 3q7m_A 98 GVTVSGGHVYIGS---EKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHT------S-NGQLQALNEADGAVKW 167 (376)
T ss_dssp EEEEETTEEEEEE---TTSEEEEEETTTCCEEEEEECSSCCCSCCEEETTEEEEEC------T-TSEEEEEETTTCCEEE
T ss_pred CceEeCCEEEEEc---CCCEEEEEECCCCCEEEEEeCCCceEcCCEEECCEEEEEc------C-CCeEEEEECCCCcEEE
Confidence 3455688887776 46789999999987542 2221111 100 11111 1 11333 888776 58
Q ss_pred eEeccCCCceeeeccccccceeEeCceEEEEEeeeccCCCCCCcEEEEEEcCCce--eeEe-cCCCCCCCC-----CCce
Q 018497 166 KNIAYGFPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEI--FQTV-MMPYDLSTD-----DADK 237 (355)
Q Consensus 166 ~~~~~~~p~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~--~~~i-~lP~~~~~~-----~~~~ 237 (355)
+.-. ..+......... ++..+|.+|.-... ..+.++|..+.+ |+.- ..| ....+ ....
T Consensus 168 ~~~~-~~~~~~~~~~~~---~~~~~~~v~~g~~~---------g~l~~~d~~tG~~~w~~~~~~~-~~~~~~~~~~~~~~ 233 (376)
T 3q7m_A 168 TVNL-DMPSLSLRGESA---PTTAFGAAVVGGDN---------GRVSAVLMEQGQMIWQQRISQA-TGSTEIDRLSDVDT 233 (376)
T ss_dssp EEEC-CC-----CCCCC---CEEETTEEEECCTT---------TEEEEEETTTCCEEEEEECCC------------CCCC
T ss_pred EEeC-CCCceeecCCCC---cEEECCEEEEEcCC---------CEEEEEECCCCcEEEEEecccC-CCCcccccccccCC
Confidence 7654 222111111122 66778888775433 489999987654 4332 222 11100 0111
Q ss_pred EEEEECCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEeEEEeeCCcEEEEEEeeCCceEEEEEeCC
Q 018497 238 YLNVFDGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPH 317 (355)
Q Consensus 238 ~L~~~~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~ 317 (355)
..+..+|.+++.... ..+..+..+. .+..|... ... ..... ..++.||+. . .++ .++.+|++
T Consensus 234 ~p~~~~~~v~~~~~~-----g~l~~~d~~t--G~~~w~~~----~~~--~~~~~-~~~~~l~~~--~-~~g-~l~~~d~~ 295 (376)
T 3q7m_A 234 TPVVVNGVVFALAYN-----GNLTALDLRS--GQIMWKRE----LGS--VNDFI-VDGNRIYLV--D-QND-RVMALTID 295 (376)
T ss_dssp CCEEETTEEEEECTT-----SCEEEEETTT--CCEEEEEC----CCC--EEEEE-EETTEEEEE--E-TTC-CEEEEETT
T ss_pred CcEEECCEEEEEecC-----cEEEEEECCC--CcEEeecc----CCC--CCCce-EECCEEEEE--c-CCC-eEEEEECC
Confidence 223446777665432 2333333322 23446542 111 11122 235677777 5 566 49999999
Q ss_pred CCeEEEE
Q 018497 318 SDTFKCI 324 (355)
Q Consensus 318 t~~~~~v 324 (355)
+++...-
T Consensus 296 tG~~~w~ 302 (376)
T 3q7m_A 296 GGVTLWT 302 (376)
T ss_dssp TCCEEEE
T ss_pred CCcEEEe
Confidence 9886543
No 48
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=93.44 E-value=3.4 Score=35.55 Aligned_cols=185 Identities=10% Similarity=0.088 Sum_probs=92.9
Q ss_pred CceEEEeecCCCCceEEEEcCCcccEEecCCCCCCCceeEEEEecCCCCCCcE--------EEE-EEcCCCce--eEecc
Q 018497 102 NGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDF--------KVV-YSLRSNSW--KNIAY 170 (355)
Q Consensus 102 ~GLl~l~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~g~d~~~~~~~~y--------kvv-yss~t~~W--~~~~~ 170 (355)
.+.+++... ....+.++|+.|++....-..... . .++.+++. ++.. +|. |+..++.- +.+..
T Consensus 9 ~~~~~v~~~--~~~~v~~~d~~~~~~~~~~~~~~~-~-~~~~~s~d---g~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~ 81 (331)
T 3u4y_A 9 SNFGIVVEQ--HLRRISFFSTDTLEILNQITLGYD-F-VDTAITSD---CSNVVVTSDFCQTLVQIETQLEPPKVVAIQE 81 (331)
T ss_dssp CCEEEEEEG--GGTEEEEEETTTCCEEEEEECCCC-E-EEEEECSS---SCEEEEEESTTCEEEEEECSSSSCEEEEEEE
T ss_pred CCEEEEEec--CCCeEEEEeCcccceeeeEEccCC-c-ceEEEcCC---CCEEEEEeCCCCeEEEEECCCCceeEEeccc
Confidence 455555543 567899999999888643222211 1 25566654 3211 221 66666543 11110
Q ss_pred -CCCceeeeccccccceeEeCceEEEEEeeeccCCCCCCcEEEEEEcCCceeeE-ecCCCCCCCCCCceEEEEE-CCe-E
Q 018497 171 -GFPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQT-VMMPYDLSTDDADKYLNVF-DGY-L 246 (355)
Q Consensus 171 -~~p~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~-i~lP~~~~~~~~~~~L~~~-~G~-L 246 (355)
..|.. .- .+.-+|...+..... .....|..+|+.+.+... ++.. .. ...++.. +|+ |
T Consensus 82 ~~~~~~-----~~---~~s~dg~~l~~~~~~-----~~~~~i~v~d~~~~~~~~~~~~~-~~-----~~~~~~spdg~~l 142 (331)
T 3u4y_A 82 GQSSMA-----DV---DITPDDQFAVTVTGL-----NHPFNMQSYSFLKNKFISTIPIP-YD-----AVGIAISPNGNGL 142 (331)
T ss_dssp CSSCCC-----CE---EECTTSSEEEECCCS-----SSSCEEEEEETTTTEEEEEEECC-TT-----EEEEEECTTSSCE
T ss_pred CCCCcc-----ce---EECCCCCEEEEecCC-----CCcccEEEEECCCCCeEEEEECC-CC-----ccceEECCCCCEE
Confidence 01110 00 223355533332221 112289999998876633 3333 11 1233333 364 6
Q ss_pred EEEEecCCCCccEEEEEEeccCCCCCCeEE-EEEecCCCceeEeEEEeeCCc-EEEEEEeeCCceEEEEEeCCCCeE
Q 018497 247 CVFATIPNNTFRSYELWVMKEYGLTESWTK-LYTIEKPQRIWWPLGFTERGK-IFIRGECRHGGYGLLVYNPHSDTF 321 (355)
Q Consensus 247 ~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~-~~~i~~~~~~~~~~~~~~~g~-i~~~~~~~~~~~~l~~yd~~t~~~ 321 (355)
++.....+ ..+.+|.++..+ ..... ...+.... ....+.+..+|+ +++. ...++ .+.+||+++++.
T Consensus 143 ~~~~~~~~---~~i~~~~~~~~g--~~~~~~~~~~~~~~-~~~~~~~spdg~~l~v~--~~~~~-~v~v~d~~~~~~ 210 (331)
T 3u4y_A 143 ILIDRSSA---NTVRRFKIDADG--VLFDTGQEFISGGT-RPFNITFTPDGNFAFVA--NLIGN-SIGILETQNPEN 210 (331)
T ss_dssp EEEEETTT---TEEEEEEECTTC--CEEEEEEEEECSSS-SEEEEEECTTSSEEEEE--ETTTT-EEEEEECSSTTS
T ss_pred EEEecCCC---ceEEEEEECCCC--cEeecCCccccCCC-CccceEECCCCCEEEEE--eCCCC-eEEEEECCCCcc
Confidence 66665543 239999998532 11111 12222222 234466677886 6666 42345 599999998774
No 49
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=93.34 E-value=3.9 Score=35.86 Aligned_cols=183 Identities=12% Similarity=0.175 Sum_probs=89.5
Q ss_pred eeCceEEEeecCCCCceEEEEcCCcccEEecCCC-CCC-CceeEEEEecCCCCCC---------cEEEEEEcCCCceeEe
Q 018497 100 SCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRP-SLN-PRYLGFGVNSVSGHLD---------DFKVVYSLRSNSWKNI 168 (355)
Q Consensus 100 s~~GLl~l~~~~~~~~~~~V~NP~T~~~~~LP~~-~~~-~~~~~~g~d~~~~~~~---------~ykvvyss~t~~W~~~ 168 (355)
+-+|-++.... .++.+.|||..++++...... ... .....+.+.|. +. .-++ ++..++.++.+
T Consensus 25 sp~g~~las~~--~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~---g~~l~s~s~D~~v~i-w~~~~~~~~~~ 98 (345)
T 3fm0_A 25 NPAGTLLASCG--GDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPC---GNYLASASFDATTCI-WKKNQDDFECV 98 (345)
T ss_dssp CTTSSCEEEEE--TTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTT---SSEEEEEETTSCEEE-EEECCC-EEEE
T ss_pred CCCCCEEEEEc--CCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCC---CCEEEEEECCCcEEE-EEccCCCeEEE
Confidence 33555444443 567888998887765422111 111 11245555553 21 1111 56555555433
Q ss_pred ccCCCceeeeccccccceeE--eCceEEEEEeeeccCCCCCCcEEEEEEcCCce-eeEe-cCCCCCCCCCCceEEEEE-C
Q 018497 169 AYGFPRSIEINRSHINSSVF--LNGSVHWCARFSCYHDNSCPWLIVSFDFAKEI-FQTV-MMPYDLSTDDADKYLNVF-D 243 (355)
Q Consensus 169 ~~~~p~~~~~~~~~~~~~v~--~~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~-~~~i-~lP~~~~~~~~~~~L~~~-~ 243 (355)
. .+........ ++. -+|.+...+..+ ..|..+|+.++. ...+ .+. .... ....+.-. +
T Consensus 99 ~-~~~~h~~~v~-----~v~~sp~~~~l~s~s~D--------~~v~iwd~~~~~~~~~~~~~~-~h~~--~v~~~~~~p~ 161 (345)
T 3fm0_A 99 T-TLEGHENEVK-----SVAWAPSGNLLATCSRD--------KSVWVWEVDEEDEYECVSVLN-SHTQ--DVKHVVWHPS 161 (345)
T ss_dssp E-EECCCSSCEE-----EEEECTTSSEEEEEETT--------SCEEEEEECTTSCEEEEEEEC-CCCS--CEEEEEECSS
T ss_pred E-EccCCCCCce-----EEEEeCCCCEEEEEECC--------CeEEEEECCCCCCeEEEEEec-CcCC--CeEEEEECCC
Confidence 3 1111000000 222 245544444333 478888987643 2322 122 1111 11122222 3
Q ss_pred CeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEeEEEeeCCcEEEEEEeeCCceEEEEEeC
Q 018497 244 GYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNP 316 (355)
Q Consensus 244 G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~ 316 (355)
|++.+....+ ..+.+|.++. ..|....++.........+.+..+|..++. ...++ .+.+||.
T Consensus 162 ~~~l~s~s~d----~~i~~w~~~~----~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s--~s~D~-~v~iW~~ 223 (345)
T 3fm0_A 162 QELLASASYD----DTVKLYREEE----DDWVCCATLEGHESTVWSLAFDPSGQRLAS--CSDDR-TVRIWRQ 223 (345)
T ss_dssp SSCEEEEETT----SCEEEEEEET----TEEEEEEEECCCSSCEEEEEECTTSSEEEE--EETTS-CEEEEEE
T ss_pred CCEEEEEeCC----CcEEEEEecC----CCEEEEEEecCCCCceEEEEECCCCCEEEE--EeCCC-eEEEecc
Confidence 6666656555 4899998875 457766666543323555667777877666 43566 4777774
No 50
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=93.25 E-value=3.6 Score=35.33 Aligned_cols=59 Identities=5% Similarity=0.009 Sum_probs=32.9
Q ss_pred cEEEEEEeccCCCCCCeEEEE--EecCCCc-eeEeEEEeeCCc-EEEEEEeeCCceEEEEEeCC--CCeEE
Q 018497 258 RSYELWVMKEYGLTESWTKLY--TIEKPQR-IWWPLGFTERGK-IFIRGECRHGGYGLLVYNPH--SDTFK 322 (355)
Q Consensus 258 ~~l~iW~l~~~~~~~~W~~~~--~i~~~~~-~~~~~~~~~~g~-i~~~~~~~~~~~~l~~yd~~--t~~~~ 322 (355)
..+.+|.++.. ....... .+..... ....+.+..+|+ +++. ...++ .+..||++ +++++
T Consensus 151 ~~v~~~d~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~--~~~~~-~i~~~~~~~~~g~~~ 215 (343)
T 1ri6_A 151 DRICLFTVSDD---GHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCV--NELNS-SVDVWELKDPHGNIE 215 (343)
T ss_dssp TEEEEEEECTT---SCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEE--ETTTT-EEEEEESSCTTSCCE
T ss_pred CEEEEEEecCC---CceeeecccccccCCCCCcceEEECCCCCEEEEE--eCCCC-EEEEEEecCCCCcEE
Confidence 48999998752 3344433 3332211 233466677786 5555 32345 58999984 45543
No 51
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=93.20 E-value=3.4 Score=34.82 Aligned_cols=190 Identities=12% Similarity=0.125 Sum_probs=99.8
Q ss_pred EEEeeeCceEEEeecCCCCceEEEEcCCcccEEecCCCCCCCceeEEEEecCCCCCCcE-------EEE-EEcCCCceeE
Q 018497 96 DVVGSCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDF-------KVV-YSLRSNSWKN 167 (355)
Q Consensus 96 ~~~~s~~GLl~l~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~g~d~~~~~~~~y-------kvv-yss~t~~W~~ 167 (355)
.+....+|-+.+... ....+.++||. ++...++.+.......++..|+. ..-| +|. |+.. +..+.
T Consensus 24 ~i~~d~~g~l~v~~~--~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~---g~l~v~~~~~~~v~~~d~~-g~~~~ 96 (300)
T 2qc5_A 24 GITSSEDGKVWFTQH--KANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSL---GDIWFTENGANKIGKLSKK-GGFTE 96 (300)
T ss_dssp EEEECTTSCEEEEET--TTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTT---SCEEEEETTTTEEEEECTT-SCEEE
T ss_pred eeeECCCCCEEEEcC--CCCeEEEECCC-CceEEEECCCCCCcceeEEECCC---CCEEEEecCCCeEEEECCC-CCeEE
Confidence 444455677766653 46789999998 77765543322222355666653 2211 222 6666 66654
Q ss_pred eccCCCceeeeccccccceeEe--CceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEecCCCCCCCCCCceEEEE-ECC
Q 018497 168 IAYGFPRSIEINRSHINSSVFL--NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNV-FDG 244 (355)
Q Consensus 168 ~~~~~p~~~~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i~lP~~~~~~~~~~~L~~-~~G 244 (355)
.. .+.... ... ++.+ +|.+|+..... ..|..+|.. ++...+.+| .... ....++. -+|
T Consensus 97 ~~--~~~~~~--~~~---~i~~~~~g~l~v~~~~~--------~~i~~~~~~-g~~~~~~~~-~~~~--~~~~i~~d~~g 157 (300)
T 2qc5_A 97 YP--LPQPDS--GPY---GITEGLNGDIWFTQLNG--------DRIGKLTAD-GTIYEYDLP-NKGS--YPAFITLGSDN 157 (300)
T ss_dssp EE--CSSTTC--CEE---EEEECSTTCEEEEETTT--------TEEEEECTT-SCEEEEECS-STTC--CEEEEEECTTS
T ss_pred ec--CCCCCC--CCc---cceECCCCCEEEEccCC--------CeEEEECCC-CCEEEccCC-CCCC--CceeEEECCCC
Confidence 44 111100 111 3333 68877765433 589999998 666666555 3221 2233444 348
Q ss_pred eEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEEEE
Q 018497 245 YLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFKCI 324 (355)
Q Consensus 245 ~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~~~~v 324 (355)
+|++...... . |+.++.. ..... ..++.......-+.+..+|.+++. ....+ .+..||+ ++++..+
T Consensus 158 ~l~v~~~~~~----~--i~~~~~~---g~~~~-~~~~~~~~~~~~i~~d~~g~l~v~--~~~~~-~i~~~~~-~g~~~~~ 223 (300)
T 2qc5_A 158 ALWFTENQNN----S--IGRITNT---GKLEE-YPLPTNAAAPVGITSGNDGALWFV--EIMGN-KIGRITT-TGEISEY 223 (300)
T ss_dssp SEEEEETTTT----E--EEEECTT---CCEEE-EECSSTTCCEEEEEECTTSSEEEE--ETTTT-EEEEECT-TCCEEEE
T ss_pred CEEEEecCCC----e--EEEECCC---CcEEE-eeCCCCCCCcceEEECCCCCEEEE--ccCCC-EEEEEcC-CCcEEEE
Confidence 8877665332 4 4444431 23332 222211112333555567788888 52334 5999999 5665554
Q ss_pred E
Q 018497 325 G 325 (355)
Q Consensus 325 ~ 325 (355)
.
T Consensus 224 ~ 224 (300)
T 2qc5_A 224 D 224 (300)
T ss_dssp E
T ss_pred E
Confidence 3
No 52
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=93.17 E-value=3.6 Score=35.06 Aligned_cols=186 Identities=10% Similarity=0.055 Sum_probs=89.2
Q ss_pred ceEEEeecCCCCceEEEEcCCcccEE-ecCCCCCCCceeEEEEecCCCCCC-----cEEEE-EEcCCC--ceeEeccCCC
Q 018497 103 GVLCFCSNGSDRSLIYLWNPLIKKYM-TLPRPSLNPRYLGFGVNSVSGHLD-----DFKVV-YSLRSN--SWKNIAYGFP 173 (355)
Q Consensus 103 GLl~l~~~~~~~~~~~V~NP~T~~~~-~LP~~~~~~~~~~~g~d~~~~~~~-----~ykvv-yss~t~--~W~~~~~~~p 173 (355)
|-+++... ....++++|+.|++.+ .++..... ......+.|. .+ .-.|. ||. ++ .|+.-. ...
T Consensus 5 ~~~lv~~~--~~~~v~~~d~~tG~~~w~~~~~~~~-~~~~~~~~pd---G~ilvs~~~~V~~~d~-~G~~~W~~~~-~~~ 76 (276)
T 3no2_A 5 QHLLVGGS--GWNKIAIINKDTKEIVWEYPLEKGW-ECNSVAATKA---GEILFSYSKGAKMITR-DGRELWNIAA-PAG 76 (276)
T ss_dssp CEEEEECT--TCSEEEEEETTTTEEEEEEECCTTC-CCCEEEECTT---SCEEEECBSEEEEECT-TSCEEEEEEC-CTT
T ss_pred CcEEEeeC--CCCEEEEEECCCCeEEEEeCCCccC-CCcCeEECCC---CCEEEeCCCCEEEECC-CCCEEEEEcC-CCC
Confidence 34444442 5788999999888765 34433210 0111222222 11 00122 666 33 566433 111
Q ss_pred ceeeeccccccceeEeCceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEecCCCCCCCCC---CceEEEEECCeEEEEE
Q 018497 174 RSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDD---ADKYLNVFDGYLCVFA 250 (355)
Q Consensus 174 ~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i~lP~~~~~~~---~~~~L~~~~G~L~~v~ 250 (355)
... . .. .+.-||.++...... ...|+++|.+.+....+.+. ...... ....-...+|.+.++.
T Consensus 77 ~~~--~-~~---~~~~dG~~lv~~~~~-------~~~v~~vd~~Gk~l~~~~~~-~~~~~~~~~~~~v~~~~~G~~lv~~ 142 (276)
T 3no2_A 77 CEM--Q-TA---RILPDGNALVAWCGH-------PSTILEVNMKGEVLSKTEFE-TGIERPHAQFRQINKNKKGNYLVPL 142 (276)
T ss_dssp CEE--E-EE---EECTTSCEEEEEEST-------TEEEEEECTTSCEEEEEEEC-CSCSSGGGSCSCCEECTTSCEEEEE
T ss_pred ccc--c-cc---EECCCCCEEEEecCC-------CCEEEEEeCCCCEEEEEecc-CCCCcccccccCceECCCCCEEEEe
Confidence 111 1 11 455688877765541 24789999876654444433 221100 0011122346665554
Q ss_pred ecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeE-EEEE
Q 018497 251 TIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTF-KCIG 325 (355)
Q Consensus 251 ~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~~-~~v~ 325 (355)
... ..+..|-.+ + +..|+... .... . ......+|.+++. ...++ +++.+|++|+++ .++.
T Consensus 143 ~~~----~~v~~~d~~--G-~~~w~~~~--~~~~--~-~~~~~~~g~~~v~--~~~~~-~v~~~d~~tG~~~w~~~ 203 (276)
T 3no2_A 143 FAT----SEVREIAPN--G-QLLNSVKL--SGTP--F-SSAFLDNGDCLVA--CGDAH-CFVQLNLESNRIVRRVN 203 (276)
T ss_dssp TTT----TEEEEECTT--S-CEEEEEEC--SSCC--C-EEEECTTSCEEEE--CBTTS-EEEEECTTTCCEEEEEE
T ss_pred cCC----CEEEEECCC--C-CEEEEEEC--CCCc--c-ceeEcCCCCEEEE--eCCCC-eEEEEeCcCCcEEEEec
Confidence 433 355555443 2 34555432 2111 1 1333457788887 52444 599999997665 3443
No 53
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=93.04 E-value=1.9 Score=38.32 Aligned_cols=111 Identities=13% Similarity=0.187 Sum_probs=62.7
Q ss_pred eeEeCceEEEEEeeeccCCCCCCcEEEEEEcCCce--eeEecCCCCCC------CCCCceEEEEECCeEEEEEecCCCCc
Q 018497 186 SVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEI--FQTVMMPYDLS------TDDADKYLNVFDGYLCVFATIPNNTF 257 (355)
Q Consensus 186 ~v~~~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~--~~~i~lP~~~~------~~~~~~~L~~~~G~L~~v~~~~~~~~ 257 (355)
+++.+|.+|...... .|.+||..+.+ |+. +++ ... ........+..+|+|++....
T Consensus 49 p~v~~~~v~~~~~~g---------~v~a~d~~tG~~~W~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~----- 112 (376)
T 3q7m_A 49 PALADNVVYAADRAG---------LVKALNADDGKEIWSV-SLA-EKDGWFSKEPALLSGGVTVSGGHVYIGSEK----- 112 (376)
T ss_dssp CEEETTEEEEECTTS---------EEEEEETTTCCEEEEE-ECC-C---CCSCCCCCEEEEEEEETTEEEEEETT-----
T ss_pred cEEECCEEEEEcCCC---------eEEEEEccCCceeeee-cCc-cccccccccCcccccCceEeCCEEEEEcCC-----
Confidence 788999999876554 89999987654 443 333 211 111234456677888775532
Q ss_pred cEEEEEEeccCCCCCCeEEEEEecCCCceeEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEEE
Q 018497 258 RSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFKC 323 (355)
Q Consensus 258 ~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~~~~ 323 (355)
..+ ..++....+..|... +.... ...|+ ..+|.|++. . .++ .++.+|.+|++...
T Consensus 113 g~l--~a~d~~tG~~~W~~~--~~~~~-~~~p~--~~~~~v~v~--~-~~g-~l~~~d~~tG~~~W 167 (376)
T 3q7m_A 113 AQV--YALNTSDGTVAWQTK--VAGEA-LSRPV--VSDGLVLIH--T-SNG-QLQALNEADGAVKW 167 (376)
T ss_dssp SEE--EEEETTTCCEEEEEE--CSSCC-CSCCE--EETTEEEEE--C-TTS-EEEEEETTTCCEEE
T ss_pred CEE--EEEECCCCCEEEEEe--CCCce-EcCCE--EECCEEEEE--c-CCC-eEEEEECCCCcEEE
Confidence 244 344422123456542 22111 12222 235667776 5 566 49999999887544
No 54
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=92.75 E-value=5.3 Score=35.86 Aligned_cols=190 Identities=14% Similarity=0.054 Sum_probs=96.0
Q ss_pred eeCceEEEeecCCCCceEEEEcCCcccEEe-cCCCCCCCceeEEEEecCCCCCCcE--------EEE-EEcCCCceeEec
Q 018497 100 SCNGVLCFCSNGSDRSLIYLWNPLIKKYMT-LPRPSLNPRYLGFGVNSVSGHLDDF--------KVV-YSLRSNSWKNIA 169 (355)
Q Consensus 100 s~~GLl~l~~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~g~d~~~~~~~~y--------kvv-yss~t~~W~~~~ 169 (355)
+.+|-+++... .++.+.+||+.+++... ++.... ....+.+++. .... .|. |+.+++.....-
T Consensus 178 ~~~~~~~~s~~--~d~~v~~~d~~~~~~~~~~~~~~~--~~~~~~~~~~---~~~l~~~~~~~~~i~~~d~~~~~~~~~~ 250 (433)
T 3bws_A 178 PEHNELWVSQM--QANAVHVFDLKTLAYKATVDLTGK--WSKILLYDPI---RDLVYCSNWISEDISVIDRKTKLEIRKT 250 (433)
T ss_dssp GGGTEEEEEEG--GGTEEEEEETTTCCEEEEEECSSS--SEEEEEEETT---TTEEEEEETTTTEEEEEETTTTEEEEEC
T ss_pred cCCCEEEEEEC--CCCEEEEEECCCceEEEEEcCCCC--CeeEEEEcCC---CCEEEEEecCCCcEEEEECCCCcEEEEe
Confidence 45676666653 56789999998876543 332111 1234555553 2211 111 676666443222
Q ss_pred cCCCceeeeccccccceeEeCceEEEEEeeeccCCC--CCCcEEEEEEcCCceeeEe-cCCCCCCCCCCceEEEEE-CC-
Q 018497 170 YGFPRSIEINRSHINSSVFLNGSVHWCARFSCYHDN--SCPWLIVSFDFAKEIFQTV-MMPYDLSTDDADKYLNVF-DG- 244 (355)
Q Consensus 170 ~~~p~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~--~~~~~Il~fD~~~~~~~~i-~lP~~~~~~~~~~~L~~~-~G- 244 (355)
...... ... .+.-+|...+.+... .+. .....|..+|+.+.+.... ..+ .. ...+.-. +|
T Consensus 251 -~~~~~~--~~~----~~~~~g~~l~~~~~~--~~~~~~~dg~i~~~d~~~~~~~~~~~~~-~~-----~~~~~~~~~g~ 315 (433)
T 3bws_A 251 -DKIGLP--RGL----LLSKDGKELYIAQFS--ASNQESGGGRLGIYSMDKEKLIDTIGPP-GN-----KRHIVSGNTEN 315 (433)
T ss_dssp -CCCSEE--EEE----EECTTSSEEEEEEEE--SCTTCSCCEEEEEEETTTTEEEEEEEEE-EC-----EEEEEECSSTT
T ss_pred -cCCCCc--eEE----EEcCCCCEEEEEECC--CCccccCCCeEEEEECCCCcEEeeccCC-CC-----cceEEECCCCC
Confidence 111111 100 222366555555432 000 0235899999987765433 323 21 1122222 35
Q ss_pred eEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEeEEEeeCCcEEEEEEeeC--------------CceE
Q 018497 245 YLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRH--------------GGYG 310 (355)
Q Consensus 245 ~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~--------------~~~~ 310 (355)
.|++....+ ..+.+|.++. ......++... ....+++..+|+.++.+ ... ++ .
T Consensus 316 ~l~~~~~~~----~~v~v~d~~~------~~~~~~~~~~~-~~~~~~~s~dg~~l~~~-~~~~~~~~~~~~~~g~~dg-~ 382 (433)
T 3bws_A 316 KIYVSDMCC----SKIEVYDLKE------KKVQKSIPVFD-KPNTIALSPDGKYLYVS-CRGPNHPTEGYLKKGLVLG-K 382 (433)
T ss_dssp EEEEEETTT----TEEEEEETTT------TEEEEEEECSS-SEEEEEECTTSSEEEEE-ECCCCCTTTCTTSCCSSCC-E
T ss_pred EEEEEecCC----CEEEEEECCC------CcEEEEecCCC-CCCeEEEcCCCCEEEEE-ecCCCccccccccccccce-E
Confidence 455554444 4899998774 23344444332 24456677778644441 311 23 5
Q ss_pred EEEEeCCCCeEEEE
Q 018497 311 LLVYNPHSDTFKCI 324 (355)
Q Consensus 311 l~~yd~~t~~~~~v 324 (355)
+..||+++++....
T Consensus 383 v~~~d~~~~~~~~~ 396 (433)
T 3bws_A 383 VYVIDTTTDTVKEF 396 (433)
T ss_dssp EEEEETTTTEEEEE
T ss_pred EEEEECCCCcEEEE
Confidence 99999999886543
No 55
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=92.73 E-value=3.3 Score=36.65 Aligned_cols=100 Identities=10% Similarity=-0.070 Sum_probs=53.3
Q ss_pred cEEEEEEcCCceeeEe-cCCCCCCCCCCceEEEEE--CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCc
Q 018497 209 WLIVSFDFAKEIFQTV-MMPYDLSTDDADKYLNVF--DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQR 285 (355)
Q Consensus 209 ~~Il~fD~~~~~~~~i-~lP~~~~~~~~~~~L~~~--~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~ 285 (355)
..|..+|+.+.+.... ... .. ......+.-. ++.+.+++..+ ..+.+|-++.. .....+.....
T Consensus 204 g~v~~wd~~~~~~~~~~~~~-~~--~~~v~~v~~sp~~~~~la~g~~d----~~i~~wd~~~~------~~~~~~~~~~~ 270 (357)
T 4g56_B 204 GRILLWDTRKPKPATRIDFC-AS--DTIPTSVTWHPEKDDTFACGDET----GNVSLVNIKNP------DSAQTSAVHSQ 270 (357)
T ss_dssp SCEEECCTTSSSCBCBCCCT-TC--CSCEEEEEECTTSTTEEEEEESS----SCEEEEESSCG------GGCEEECCCSS
T ss_pred CceEEEECCCCceeeeeeec-cc--cccccchhhhhcccceEEEeecc----cceeEEECCCC------cEeEEEeccce
Confidence 4688889887653322 221 11 1111223222 35666655554 48999988642 11222322221
Q ss_pred eeEeEEEeeCC-cEEEEEEeeCCceEEEEEeCCCCeEEEE
Q 018497 286 IWWPLGFTERG-KIFIRGECRHGGYGLLVYNPHSDTFKCI 324 (355)
Q Consensus 286 ~~~~~~~~~~g-~i~~~~~~~~~~~~l~~yd~~t~~~~~v 324 (355)
....+++..+| .++.. ...++ .+.+||.++++....
T Consensus 271 ~v~~l~~sp~~~~~las--gs~D~-~i~iwd~~~~~~~~~ 307 (357)
T 4g56_B 271 NITGLAYSYHSSPFLAS--ISEDC-TVAVLDADFSEVFRD 307 (357)
T ss_dssp CEEEEEECSSSSCCEEE--EETTS-CEEEECTTSCEEEEE
T ss_pred eEEEEEEcCCCCCEEEE--EeCCC-EEEEEECCCCcEeEE
Confidence 24456666666 55555 32567 499999999876543
No 56
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=92.65 E-value=4.6 Score=34.92 Aligned_cols=187 Identities=8% Similarity=0.006 Sum_probs=92.5
Q ss_pred eCceEEEeecCCCCceEEEEcCCcccEE-ecCCCCCCC-------ceeEEEEecCCCCCCcEE---------EE-EEcCC
Q 018497 101 CNGVLCFCSNGSDRSLIYLWNPLIKKYM-TLPRPSLNP-------RYLGFGVNSVSGHLDDFK---------VV-YSLRS 162 (355)
Q Consensus 101 ~~GLl~l~~~~~~~~~~~V~NP~T~~~~-~LP~~~~~~-------~~~~~g~d~~~~~~~~yk---------vv-yss~t 162 (355)
.++.+.+... ....+.++|+.|++.. .++...... ...++.+++. ++..- |. |+.++
T Consensus 99 dg~~l~v~~~--~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d---g~~l~~~~~~~~~~i~~~d~~~ 173 (353)
T 3vgz_A 99 TTQTLWFGNT--VNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDA---TNTVYISGIGKESVIWVVDGGN 173 (353)
T ss_dssp TTTEEEEEET--TTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETT---TTEEEEEEESSSCEEEEEETTT
T ss_pred CCCEEEEEec--CCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCC---CCEEEEEecCCCceEEEEcCCC
Confidence 3444555553 4678999999998764 333321110 1245666664 33211 11 55554
Q ss_pred CceeEeccCCC-ceeeeccccccceeEeCceEEEEEeeeccCCCCCCcEEEEEEcCCceee-EecCCCCCCCCCCceEEE
Q 018497 163 NSWKNIAYGFP-RSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQ-TVMMPYDLSTDDADKYLN 240 (355)
Q Consensus 163 ~~W~~~~~~~p-~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~-~i~lP~~~~~~~~~~~L~ 240 (355)
++= +. ..+ ..... ... .+.-+|...++.... ..|..+|+.+.+.. .+..+ ..........+.
T Consensus 174 ~~~--~~-~~~~~~~~~-~~~---~~s~dg~~l~~~~~~--------~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~ 237 (353)
T 3vgz_A 174 IKL--KT-AIQNTGKMS-TGL---ALDSEGKRLYTTNAD--------GELITIDTADNKILSRKKLL-DDGKEHFFINIS 237 (353)
T ss_dssp TEE--EE-EECCCCTTC-CCC---EEETTTTEEEEECTT--------SEEEEEETTTTEEEEEEECC-CSSSCCCEEEEE
T ss_pred Cce--EE-EecCCCCcc-ceE---EECCCCCEEEEEcCC--------CeEEEEECCCCeEEEEEEcC-CCCCCcccceEE
Confidence 322 11 111 00000 100 233366544443322 48889999887764 34553 221111222234
Q ss_pred EE-CCe-EEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEeEEEeeCCc-EEEEEEeeCCceEEEEEeCC
Q 018497 241 VF-DGY-LCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGK-IFIRGECRHGGYGLLVYNPH 317 (355)
Q Consensus 241 ~~-~G~-L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~-i~~~~~~~~~~~~l~~yd~~ 317 (355)
.. +|+ |++... .. ..+.+|-++. .+- ...++... ...+.+..+|+ +|+. ...++ .+.+||.+
T Consensus 238 ~s~dg~~l~~~~~-~~---~~v~~~d~~~----~~~--~~~~~~~~--~~~~~~s~dg~~l~v~--~~~~~-~v~~~d~~ 302 (353)
T 3vgz_A 238 LDTARQRAFITDS-KA---AEVLVVDTRN----GNI--LAKVAAPE--SLAVLFNPARNEAYVT--HRQAG-KVSVIDAK 302 (353)
T ss_dssp EETTTTEEEEEES-SS---SEEEEEETTT----CCE--EEEEECSS--CCCEEEETTTTEEEEE--ETTTT-EEEEEETT
T ss_pred ECCCCCEEEEEeC-CC---CEEEEEECCC----CcE--EEEEEcCC--CceEEECCCCCEEEEE--ECCCC-eEEEEECC
Confidence 33 354 655543 32 4787886653 222 33333322 12366677776 6666 42345 59999999
Q ss_pred CCeEEE
Q 018497 318 SDTFKC 323 (355)
Q Consensus 318 t~~~~~ 323 (355)
+++...
T Consensus 303 ~~~~~~ 308 (353)
T 3vgz_A 303 SYKVVK 308 (353)
T ss_dssp TTEEEE
T ss_pred CCeEEE
Confidence 988654
No 57
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=92.62 E-value=4.8 Score=35.08 Aligned_cols=206 Identities=8% Similarity=-0.004 Sum_probs=101.8
Q ss_pred EEEeeeCceEEEeecCCCCceEEEEcCCcccEE-ecCCCCCC--C-ceeEEEEecC----CCCCCcEEEE-EEcCCCcee
Q 018497 96 DVVGSCNGVLCFCSNGSDRSLIYLWNPLIKKYM-TLPRPSLN--P-RYLGFGVNSV----SGHLDDFKVV-YSLRSNSWK 166 (355)
Q Consensus 96 ~~~~s~~GLl~l~~~~~~~~~~~V~NP~T~~~~-~LP~~~~~--~-~~~~~g~d~~----~~~~~~ykvv-yss~t~~W~ 166 (355)
.+..+.+|.+.+... ....+.++||.|++.. .++..... . ...++.++.. .....+-.|. +|.++++..
T Consensus 88 ~i~~~~~g~lyv~~~--~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~t~~~~ 165 (328)
T 3dsm_A 88 YIHFLSDEKAYVTQI--WDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWSYQNRILKIDTETDKVV 165 (328)
T ss_dssp EEEEEETTEEEEEEB--SCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECTTCCEEEEEETTTTEEE
T ss_pred EEEEeCCCeEEEEEC--CCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcCCCCCEEEEEECCCCeEE
Confidence 444557787766653 4678999999998765 34433200 0 0012222211 0000011232 888887654
Q ss_pred EeccCCCceeeeccccccceeEeCceEEEEEeeeccCCCC----CCcEEEEEEcCCceee-EecCCCCCCCCCCceEEEE
Q 018497 167 NIAYGFPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNS----CPWLIVSFDFAKEIFQ-TVMMPYDLSTDDADKYLNV 241 (355)
Q Consensus 167 ~~~~~~p~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~~----~~~~Il~fD~~~~~~~-~i~lP~~~~~~~~~~~L~~ 241 (355)
..- ...... ..- .+.-+|.+|...... .+.. ....|..+|+.+.+.. .+.+| ... ....++.
T Consensus 166 ~~i-~~g~~p--~~i----~~~~dG~l~v~~~~~--~~~~~~~~~~~~v~~id~~t~~v~~~~~~~-~g~---~p~~la~ 232 (328)
T 3dsm_A 166 DEL-TIGIQP--TSL----VMDKYNKMWTITDGG--YEGSPYGYEAPSLYRIDAETFTVEKQFKFK-LGD---WPSEVQL 232 (328)
T ss_dssp EEE-ECSSCB--CCC----EECTTSEEEEEBCCB--CTTCSSCBCCCEEEEEETTTTEEEEEEECC-TTC---CCEEEEE
T ss_pred EEE-EcCCCc--cce----EEcCCCCEEEEECCC--ccCCccccCCceEEEEECCCCeEEEEEecC-CCC---CceeEEE
Confidence 221 111111 100 223368877765432 0000 1268999999988775 45666 322 2234555
Q ss_pred E--CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEeEEEee-CCcEEEEEEe----eCCceEEEEE
Q 018497 242 F--DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTE-RGKIFIRGEC----RHGGYGLLVY 314 (355)
Q Consensus 242 ~--~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~-~g~i~~~~~~----~~~~~~l~~y 314 (355)
. ++.|+++.. .||+++-.. ........++.......-+++.. +|.||+. . ..++ .|.+|
T Consensus 233 ~~d~~~lyv~~~---------~v~~~d~~t--~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva--~~~~y~~~~-~V~v~ 298 (328)
T 3dsm_A 233 NGTRDTLYWINN---------DIWRMPVEA--DRVPVRPFLEFRDTKYYGLTVNPNNGEVYVA--DAIDYQQQG-IVYRY 298 (328)
T ss_dssp CTTSCEEEEESS---------SEEEEETTC--SSCCSSCSBCCCSSCEEEEEECTTTCCEEEE--ECTTSSSEE-EEEEE
T ss_pred ecCCCEEEEEcc---------EEEEEECCC--CceeeeeeecCCCCceEEEEEcCCCCeEEEE--cccccccCC-EEEEE
Confidence 5 345555321 355555321 11110001111110123355554 5688888 4 2344 69999
Q ss_pred eCCCCeEEEEEEecCc
Q 018497 315 NPHSDTFKCIGVHLPY 330 (355)
Q Consensus 315 d~~t~~~~~v~~~~~~ 330 (355)
|++.+.+..+.....+
T Consensus 299 d~~g~~~~~i~~G~~P 314 (328)
T 3dsm_A 299 SPQGKLIDEFYVGIIP 314 (328)
T ss_dssp CTTCCEEEEEEEEESE
T ss_pred CCCCCEEEEEEeccCc
Confidence 9997778888775544
No 58
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=92.53 E-value=4.7 Score=34.79 Aligned_cols=55 Identities=13% Similarity=0.334 Sum_probs=34.2
Q ss_pred cEEEEEEeccCCCCCCeEEEEEecCCCceeEeEEEeeCC----cEEEEEEeeCCceEEEEEeCCC
Q 018497 258 RSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERG----KIFIRGECRHGGYGLLVYNPHS 318 (355)
Q Consensus 258 ~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g----~i~~~~~~~~~~~~l~~yd~~t 318 (355)
..+.||.++. ...|.....+.........+++..++ ..++. ...++ .+.+||+++
T Consensus 189 ~~v~lWd~~~---~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las--~s~D~-~v~iw~~~~ 247 (316)
T 3bg1_A 189 NLIKLWKEEE---DGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIAS--CSQDG-RVFIWTCDD 247 (316)
T ss_dssp SBCCEEEECT---TSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEE--EETTC-EEEEEECSS
T ss_pred CeEEEEEeCC---CCccceeeecccCCCceEEEEecCCCCCCCceEEE--EcCCC-eEEEEEccC
Confidence 4899999864 24577766654332234455555553 55555 43666 499999876
No 59
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=92.25 E-value=7.8 Score=36.65 Aligned_cols=189 Identities=12% Similarity=0.058 Sum_probs=97.4
Q ss_pred eCceEEEeecCCCCceEEEEcCCcccEEe-cCCCCCCCceeEEEEecCCCCCCcEEEE--------EEc--CCCceeEec
Q 018497 101 CNGVLCFCSNGSDRSLIYLWNPLIKKYMT-LPRPSLNPRYLGFGVNSVSGHLDDFKVV--------YSL--RSNSWKNIA 169 (355)
Q Consensus 101 ~~GLl~l~~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~g~d~~~~~~~~ykvv--------yss--~t~~W~~~~ 169 (355)
-+|.+++... .+..+.|+|+.|++... ++.... ..++.++|. ++..-+. ||. ++++ .+.
T Consensus 147 p~~~~~vs~~--~d~~V~v~D~~t~~~~~~i~~g~~---~~~v~~spd---g~~l~v~~~d~~V~v~D~~~~t~~--~~~ 216 (543)
T 1nir_A 147 LPNLFSVTLR--DAGQIALVDGDSKKIVKVIDTGYA---VHISRMSAS---GRYLLVIGRDARIDMIDLWAKEPT--KVA 216 (543)
T ss_dssp GGGEEEEEEG--GGTEEEEEETTTCCEEEEEECSTT---EEEEEECTT---SCEEEEEETTSEEEEEETTSSSCE--EEE
T ss_pred CCCEEEEEEc--CCCeEEEEECCCceEEEEEecCcc---cceEEECCC---CCEEEEECCCCeEEEEECcCCCCc--EEE
Confidence 3677766664 56789999999987653 432211 235556664 3222111 777 4432 222
Q ss_pred cCCCceeeecccccccee-Ee-----CceEEEEEeeeccCCCCCCcEEEEEEcCCcee-eEecCCCCCC-C------CCC
Q 018497 170 YGFPRSIEINRSHINSSV-FL-----NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIF-QTVMMPYDLS-T------DDA 235 (355)
Q Consensus 170 ~~~p~~~~~~~~~~~~~v-~~-----~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~-~~i~lP~~~~-~------~~~ 235 (355)
.++...... ++ +- +|..-+.+... ...|.++|..+.+. ..++.+ ... . +..
T Consensus 217 -~i~~g~~p~------~va~sp~~~~dg~~l~v~~~~-------~~~v~v~D~~t~~~~~~i~~~-g~~~~~~~~~~~~~ 281 (543)
T 1nir_A 217 -EIKIGIEAR------SVESSKFKGYEDRYTIAGAYW-------PPQFAIMDGETLEPKQIVSTR-GMTVDTQTYHPEPR 281 (543)
T ss_dssp -EEECCSEEE------EEEECCSTTCTTTEEEEEEEE-------SSEEEEEETTTCCEEEEEECC-EECSSSCCEESCCC
T ss_pred -EEecCCCcc------eEEeCCCcCCCCCEEEEEEcc-------CCeEEEEeccccccceeeccc-CcccCccccccCCc
Confidence 222111111 22 22 67544444332 25789999887655 444543 211 0 001
Q ss_pred ceEEEEEC-CeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEeEEEeeCCcEEEEEEeeCCceEEEEE
Q 018497 236 DKYLNVFD-GYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVY 314 (355)
Q Consensus 236 ~~~L~~~~-G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~y 314 (355)
...+.... |...++...+. ..+.+|-..+.. . .++.+++... ...-+++..+|+.++.. ...+. ++.++
T Consensus 282 v~~i~~s~~~~~~~vs~~~~---g~i~vvd~~~~~--~--l~~~~i~~~~-~~~~~~~spdg~~l~va-~~~~~-~v~v~ 351 (543)
T 1nir_A 282 VAAIIASHEHPEFIVNVKET---GKVLLVNYKDID--N--LTVTSIGAAP-FLHDGGWDSSHRYFMTA-ANNSN-KVAVI 351 (543)
T ss_dssp EEEEEECSSSSEEEEEETTT---TEEEEEECTTSS--S--CEEEEEECCS-SCCCEEECTTSCEEEEE-EGGGT-EEEEE
T ss_pred eEEEEECCCCCEEEEEECCC---CeEEEEEecCCC--c--ceeEEeccCc-CccCceECCCCCEEEEE-ecCCC-eEEEE
Confidence 12333332 55555555444 577777766521 1 2233454332 24447778888754441 31234 59999
Q ss_pred eCCCCeEEEE
Q 018497 315 NPHSDTFKCI 324 (355)
Q Consensus 315 d~~t~~~~~v 324 (355)
|.+++++...
T Consensus 352 D~~tg~l~~~ 361 (543)
T 1nir_A 352 DSKDRRLSAL 361 (543)
T ss_dssp ETTTTEEEEE
T ss_pred ECCCCeEEEe
Confidence 9999987553
No 60
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=92.24 E-value=9.7 Score=37.69 Aligned_cols=191 Identities=13% Similarity=0.102 Sum_probs=101.7
Q ss_pred eCceEEEeecCCCCceEEEEcCCcccEEecCCCCCC-CceeEEEEecCCCCCCcE-----EEE-EEcCCCceeEeccCCC
Q 018497 101 CNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLN-PRYLGFGVNSVSGHLDDF-----KVV-YSLRSNSWKNIAYGFP 173 (355)
Q Consensus 101 ~~GLl~l~~~~~~~~~~~V~NP~T~~~~~LP~~~~~-~~~~~~g~d~~~~~~~~y-----kvv-yss~t~~W~~~~~~~p 173 (355)
.+|-|.+.. ....++.+||.|+++..++..... .....+..|+. ..=+ -+. |+.+++.|+... ..+
T Consensus 416 ~~g~lWigt---~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~---g~lwigt~~Gl~~~~~~~~~~~~~~-~~~ 488 (781)
T 3v9f_A 416 SEGNLWFGT---YLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKN---KKIWIGTHAGVFVIDLASKKVIHHY-DTS 488 (781)
T ss_dssp TTSCEEEEE---TTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTT---SEEEEEETTEEEEEESSSSSCCEEE-CTT
T ss_pred CCCCEEEEe---ccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCC---CCEEEEECCceEEEeCCCCeEEecc-cCc
Confidence 356665554 346789999999999887653111 11244555543 2100 122 888888887765 222
Q ss_pred c-eeeeccccccceeEe--CceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEecCCCCCCCCCCceEEEE-ECCeEEEE
Q 018497 174 R-SIEINRSHINSSVFL--NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNV-FDGYLCVF 249 (355)
Q Consensus 174 ~-~~~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i~lP~~~~~~~~~~~L~~-~~G~L~~v 249 (355)
. ......-. ++.. +|.+ |++... ..|..||..++++..+..+ ..........+.+ .+|.|.+.
T Consensus 489 ~~~~~~~~i~---~i~~d~~g~l-Wigt~~--------~Gl~~~~~~~~~~~~~~~~-~~l~~~~i~~i~~d~~g~lWi~ 555 (781)
T 3v9f_A 489 NSQLLENFVR---SIAQDSEGRF-WIGTFG--------GGVGIYTPDMQLVRKFNQY-EGFCSNTINQIYRSSKGQMWLA 555 (781)
T ss_dssp TSSCSCSCEE---EEEECTTCCE-EEEESS--------SCEEEECTTCCEEEEECTT-TTCSCSCEEEEEECTTSCEEEE
T ss_pred ccccccceeE---EEEEcCCCCE-EEEEcC--------CCEEEEeCCCCeEEEccCC-CCCCCCeeEEEEECCCCCEEEE
Confidence 1 00000001 2332 4555 555432 3689999999999887544 4333323334444 35788776
Q ss_pred EecCCCCccEEEEEEeccCCCCCCeEEEEEec-CCCceeEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEEEEE
Q 018497 250 ATIPNNTFRSYELWVMKEYGLTESWTKLYTIE-KPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFKCIG 325 (355)
Q Consensus 250 ~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~-~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~~~~v~ 325 (355)
+. . .+ |..++.. +..+.....-+ +.......+....+|.|.+. . ..+ +..||+++++++...
T Consensus 556 T~-~-----Gl-v~~~d~~--~~~~~~~~~~~gl~~~~i~~i~~d~~g~lW~~--t-~~G--l~~~~~~~~~~~~~~ 618 (781)
T 3v9f_A 556 TG-E-----GL-VCFPSAR--NFDYQVFQRKEGLPNTHIRAISEDKNGNIWAS--T-NTG--ISCYITSKKCFYTYD 618 (781)
T ss_dssp ET-T-----EE-EEESCTT--TCCCEEECGGGTCSCCCCCEEEECSSSCEEEE--C-SSC--EEEEETTTTEEEEEC
T ss_pred EC-C-----Cc-eEEECCC--CCcEEEccccCCCCCceEEEEEECCCCCEEEE--c-CCc--eEEEECCCCceEEec
Confidence 54 2 22 1233321 12333221111 11112233444567788888 5 343 999999999887763
No 61
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=91.70 E-value=5.7 Score=33.88 Aligned_cols=97 Identities=11% Similarity=0.132 Sum_probs=56.5
Q ss_pred cEEEEEEcCCceeeE-ecCCCCCCCCCCceEEEEE-CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCce
Q 018497 209 WLIVSFDFAKEIFQT-VMMPYDLSTDDADKYLNVF-DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRI 286 (355)
Q Consensus 209 ~~Il~fD~~~~~~~~-i~lP~~~~~~~~~~~L~~~-~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~ 286 (355)
..|..+|+.+.+... +... .. ....+.-. +|+..++...+ ..+.+|.++.. .....+.... .
T Consensus 163 g~v~~~d~~~~~~~~~~~~~-~~----~i~~~~~~~~~~~l~~~~~d----g~i~~~d~~~~------~~~~~~~~~~-~ 226 (337)
T 1gxr_A 163 GNIAVWDLHNQTLVRQFQGH-TD----GASCIDISNDGTKLWTGGLD----NTVRSWDLREG------RQLQQHDFTS-Q 226 (337)
T ss_dssp SCEEEEETTTTEEEEEECCC-SS----CEEEEEECTTSSEEEEEETT----SEEEEEETTTT------EEEEEEECSS-C
T ss_pred CcEEEEeCCCCceeeeeecc-cC----ceEEEEECCCCCEEEEEecC----CcEEEEECCCC------ceEeeecCCC-c
Confidence 478999998876533 2222 11 11223333 46666666655 48999988741 2333333332 2
Q ss_pred eEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEEEE
Q 018497 287 WWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFKCI 324 (355)
Q Consensus 287 ~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~~~~v 324 (355)
...+.+..+|..++. ...++ .+..||+++++...+
T Consensus 227 v~~~~~s~~~~~l~~--~~~~~-~i~~~~~~~~~~~~~ 261 (337)
T 1gxr_A 227 IFSLGYCPTGEWLAV--GMESS-NVEVLHVNKPDKYQL 261 (337)
T ss_dssp EEEEEECTTSSEEEE--EETTS-CEEEEETTSSCEEEE
T ss_pred eEEEEECCCCCEEEE--EcCCC-cEEEEECCCCCeEEE
Confidence 444666677776666 42566 499999998876544
No 62
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=91.57 E-value=5.5 Score=33.45 Aligned_cols=192 Identities=11% Similarity=0.071 Sum_probs=99.6
Q ss_pred EEEeeeCceEEEeecCCCCceEEEEcCCcccEEecCCCCCCCceeEEEEecCCCCCCcE-------EEE-EEcCCCceeE
Q 018497 96 DVVGSCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDF-------KVV-YSLRSNSWKN 167 (355)
Q Consensus 96 ~~~~s~~GLl~l~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~g~d~~~~~~~~y-------kvv-yss~t~~W~~ 167 (355)
.+....+|-+.+... ....++++||. ++...++.+.......++.+|+. ..-| +|. |+.. +..+.
T Consensus 66 ~i~~~~~g~l~v~~~--~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~---g~l~v~~~~~~~i~~~~~~-g~~~~ 138 (300)
T 2qc5_A 66 CLIVSSLGDIWFTEN--GANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLN---GDIWFTQLNGDRIGKLTAD-GTIYE 138 (300)
T ss_dssp EEEECTTSCEEEEET--TTTEEEEECTT-SCEEEEECSSTTCCEEEEEECST---TCEEEEETTTTEEEEECTT-SCEEE
T ss_pred eEEECCCCCEEEEec--CCCeEEEECCC-CCeEEecCCCCCCCCccceECCC---CCEEEEccCCCeEEEECCC-CCEEE
Confidence 344445677766652 45789999998 66665443322222356666653 2211 121 5554 44443
Q ss_pred eccCCCceeeeccccccceeE--eCceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEecCCCCCCCCCCceEEEEE-CC
Q 018497 168 IAYGFPRSIEINRSHINSSVF--LNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF-DG 244 (355)
Q Consensus 168 ~~~~~p~~~~~~~~~~~~~v~--~~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i~lP~~~~~~~~~~~L~~~-~G 244 (355)
.. .+.... ... ++. -+|.+|+..... ..|..||. +.++..+.+| .... ....++.. +|
T Consensus 139 ~~--~~~~~~--~~~---~i~~d~~g~l~v~~~~~--------~~i~~~~~-~g~~~~~~~~-~~~~--~~~~i~~d~~g 199 (300)
T 2qc5_A 139 YD--LPNKGS--YPA---FITLGSDNALWFTENQN--------NSIGRITN-TGKLEEYPLP-TNAA--APVGITSGNDG 199 (300)
T ss_dssp EE--CSSTTC--CEE---EEEECTTSSEEEEETTT--------TEEEEECT-TCCEEEEECS-STTC--CEEEEEECTTS
T ss_pred cc--CCCCCC--Cce---eEEECCCCCEEEEecCC--------CeEEEECC-CCcEEEeeCC-CCCC--CcceEEECCCC
Confidence 32 111000 011 333 368877765433 57999999 6667666665 4331 22334443 58
Q ss_pred eEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEEEE
Q 018497 245 YLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFKCI 324 (355)
Q Consensus 245 ~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~~~~v 324 (355)
.|++..... ..+.++.. . ..... ..++........+++..+|.|++. ....+ .+..||+ ++++..+
T Consensus 200 ~l~v~~~~~----~~i~~~~~--~---g~~~~-~~~~~~~~~~~~i~~d~~g~l~v~--~~~~~-~i~~~~~-~g~~~~~ 265 (300)
T 2qc5_A 200 ALWFVEIMG----NKIGRITT--T---GEISE-YDIPTPNARPHAITAGKNSEIWFT--EWGAN-QIGRITN-DNTIQEY 265 (300)
T ss_dssp SEEEEETTT----TEEEEECT--T---CCEEE-EECSSTTCCEEEEEECSTTCEEEE--ETTTT-EEEEECT-TSCEEEE
T ss_pred CEEEEccCC----CEEEEEcC--C---CcEEE-EECCCCCCCceEEEECCCCCEEEe--ccCCC-eEEEECC-CCcEEEE
Confidence 888876543 24544433 1 22333 223321112334555667888888 52335 5999999 5666655
Q ss_pred EEe
Q 018497 325 GVH 327 (355)
Q Consensus 325 ~~~ 327 (355)
.+.
T Consensus 266 ~~~ 268 (300)
T 2qc5_A 266 QLQ 268 (300)
T ss_dssp ECC
T ss_pred ECC
Confidence 443
No 63
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=91.54 E-value=6.4 Score=34.17 Aligned_cols=113 Identities=12% Similarity=0.111 Sum_probs=58.5
Q ss_pred eeEe--C-ceEEEEEeeeccCCCCCCcEEEEEEcCCcee-eEecCCCCCCCCCCceEEEEECCeEEEEEecCC---CCcc
Q 018497 186 SVFL--N-GSVHWCARFSCYHDNSCPWLIVSFDFAKEIF-QTVMMPYDLSTDDADKYLNVFDGYLCVFATIPN---NTFR 258 (355)
Q Consensus 186 ~v~~--~-G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~-~~i~lP~~~~~~~~~~~L~~~~G~L~~v~~~~~---~~~~ 258 (355)
++.+ + |.+|+..... ..|..||+.+.++ ..+..+ .... ....+....|.++....... ....
T Consensus 200 gia~d~~~g~l~v~d~~~--------~~I~~~~~~~G~~~~~~~~~-~~~~--~~~~~~~~pg~~~~~~g~~~v~~~~~~ 268 (329)
T 3fvz_A 200 SLALVPHLDQLCVADREN--------GRIQCFKTDTKEFVREIKHA-SFGR--NVFAISYIPGFLFAVNGKPYFGDQEPV 268 (329)
T ss_dssp EEEEETTTTEEEEEETTT--------TEEEEEETTTCCEEEEECCT-TTTT--CEEEEEEETTEEEEEECCCCTTCSCCC
T ss_pred EEEEECCCCEEEEEECCC--------CEEEEEECCCCcEEEEEecc-ccCC--CcceeeecCCEEEEeCCCEEeccCCCc
Confidence 5555 4 8999887654 6899999985555 445544 2221 12223333344444433211 1123
Q ss_pred EEEEEEeccCCCCCCeEEEEEec--CCCc-eeEeEEEeeCCcEEEEEEeeCCceEEEEEeCCC
Q 018497 259 SYELWVMKEYGLTESWTKLYTIE--KPQR-IWWPLGFTERGKIFIRGECRHGGYGLLVYNPHS 318 (355)
Q Consensus 259 ~l~iW~l~~~~~~~~W~~~~~i~--~~~~-~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t 318 (355)
.+.+|.++. .+ .+..+. ...+ ...-+++..+|.||+. ...++ .+..|+++.
T Consensus 269 ~v~~~~~~~----g~--~~~~~~~~~~~~~~p~~ia~~~dG~lyva--d~~~~-~I~~~~~~~ 322 (329)
T 3fvz_A 269 QGFVMNFSS----GE--IIDVFKPVRKHFDMPHDIVASEDGTVYIG--DAHTN-TVWKFTLTE 322 (329)
T ss_dssp CEEEEETTT----CC--EEEEECCSSSCCSSEEEEEECTTSEEEEE--ESSSC-CEEEEEEEE
T ss_pred EEEEEEcCC----Ce--EEEEEcCCCCccCCeeEEEECCCCCEEEE--ECCCC-EEEEEeCCc
Confidence 666776553 22 223332 1111 2334566677777777 52334 477777654
No 64
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=91.52 E-value=4.9 Score=34.12 Aligned_cols=112 Identities=13% Similarity=0.036 Sum_probs=66.5
Q ss_pred eEeCceEEEEEeeeccCCCCCCcEEEEEEcCCcee-eEecCCCCCCCCCCceEEEEECCeEEEEEecCCCCccEEEEEEe
Q 018497 187 VFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIF-QTVMMPYDLSTDDADKYLNVFDGYLCVFATIPNNTFRSYELWVM 265 (355)
Q Consensus 187 v~~~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~-~~i~lP~~~~~~~~~~~L~~~~G~L~~v~~~~~~~~~~l~iW~l 265 (355)
...++.+|.+.... ..+.+||..+.+- ..++.+ .. ...|+.-+++|++... . .+ ||.+
T Consensus 93 t~~g~~ly~ltw~~--------~~v~v~D~~t~~~~~ti~~~-~e-----G~glt~dg~~L~~SdG-s----~~--i~~i 151 (262)
T 3nol_A 93 SDWKDKIVGLTWKN--------GLGFVWNIRNLRQVRSFNYD-GE-----GWGLTHNDQYLIMSDG-T----PV--LRFL 151 (262)
T ss_dssp EEETTEEEEEESSS--------SEEEEEETTTCCEEEEEECS-SC-----CCCEEECSSCEEECCS-S----SE--EEEE
T ss_pred EEeCCEEEEEEeeC--------CEEEEEECccCcEEEEEECC-CC-----ceEEecCCCEEEEECC-C----Ce--EEEE
Confidence 34577888887655 6899999987654 556766 32 2345554567776543 2 23 6777
Q ss_pred ccCCCCCCeEEEEEecCCCc-----eeEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeE-EEEEEe
Q 018497 266 KEYGLTESWTKLYTIEKPQR-----IWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTF-KCIGVH 327 (355)
Q Consensus 266 ~~~~~~~~W~~~~~i~~~~~-----~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~~-~~v~~~ 327 (355)
+-.. =..+.+|..... ...-+. +.+|+||.. . ...+.+...|++|+++ ..+...
T Consensus 152 Dp~T----~~v~~~I~V~~~g~~~~~lNELe-~~~G~lyan--~-w~~~~I~vIDp~tG~V~~~Id~~ 211 (262)
T 3nol_A 152 DPES----LTPVRTITVTAHGEELPELNELE-WVDGEIFAN--V-WQTNKIVRIDPETGKVTGIIDLN 211 (262)
T ss_dssp CTTT----CSEEEEEECEETTEECCCEEEEE-EETTEEEEE--E-TTSSEEEEECTTTCBEEEEEECT
T ss_pred cCCC----CeEEEEEEeccCCccccccceeE-EECCEEEEE--E-ccCCeEEEEECCCCcEEEEEECC
Confidence 7421 233444443210 000122 237888877 5 4444699999999997 445653
No 65
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=91.45 E-value=5.7 Score=33.39 Aligned_cols=194 Identities=9% Similarity=0.086 Sum_probs=101.7
Q ss_pred EEeeeCceEEEeecCCCCceEEEEcCCcccEEecCCCCCC----CceeEEEEecCCCCCCcE---------EEE-EEcCC
Q 018497 97 VVGSCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLN----PRYLGFGVNSVSGHLDDF---------KVV-YSLRS 162 (355)
Q Consensus 97 ~~~s~~GLl~l~~~~~~~~~~~V~NP~T~~~~~LP~~~~~----~~~~~~g~d~~~~~~~~y---------kvv-yss~t 162 (355)
+.-+.+|-+.+... ....+.++||..+....++..... ....++.+++. .+.. +|. |+...
T Consensus 35 v~~~~~g~l~v~~~--~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~---~g~l~v~~~~~~~~i~~~d~~g 109 (286)
T 1q7f_A 35 VAVNAQNDIIVADT--NNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRN---SGDIIVTERSPTHQIQIYNQYG 109 (286)
T ss_dssp EEECTTCCEEEEEG--GGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETT---TTEEEEEECGGGCEEEEECTTS
T ss_pred EEECCCCCEEEEEC--CCCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcC---CCeEEEEcCCCCCEEEEECCCC
Confidence 33445677766653 456899999986665666542211 11255666432 2221 222 55332
Q ss_pred CceeEeccCCCceeeeccccccceeE--eCceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEecCCCCCCCCCCceEEE
Q 018497 163 NSWKNIAYGFPRSIEINRSHINSSVF--LNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLN 240 (355)
Q Consensus 163 ~~W~~~~~~~p~~~~~~~~~~~~~v~--~~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i~lP~~~~~~~~~~~L~ 240 (355)
..-+.+. ..... ... ++. -+|.+|...... ..|..||...+....+..+ .... ....++
T Consensus 110 ~~~~~~~-~~~~~----~~~---~i~~~~~g~l~v~~~~~--------~~i~~~~~~g~~~~~~~~~-~~~~--~p~~i~ 170 (286)
T 1q7f_A 110 QFVRKFG-ATILQ----HPR---GVTVDNKGRIIVVECKV--------MRVIIFDQNGNVLHKFGCS-KHLE--FPNGVV 170 (286)
T ss_dssp CEEEEEC-TTTCS----CEE---EEEECTTSCEEEEETTT--------TEEEEECTTSCEEEEEECT-TTCS--SEEEEE
T ss_pred cEEEEec-CccCC----Cce---EEEEeCCCCEEEEECCC--------CEEEEEcCCCCEEEEeCCC-CccC--CcEEEE
Confidence 2222222 11100 011 333 368877765433 5899999887766666433 2221 223344
Q ss_pred EE-CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCC-c-eeEeEEEeeCCcEEEEEEeeCCceEEEEEeCC
Q 018497 241 VF-DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQ-R-IWWPLGFTERGKIFIRGECRHGGYGLLVYNPH 317 (355)
Q Consensus 241 ~~-~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~-~-~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~ 317 (355)
.. +|+|++..... ..+.+|..+ ... +..+.... + ...-+++..+|.+++. ...+...+..||.+
T Consensus 171 ~~~~g~l~v~~~~~----~~i~~~~~~-----g~~--~~~~~~~g~~~~p~~i~~d~~G~l~v~--~~~~~~~i~~~~~~ 237 (286)
T 1q7f_A 171 VNDKQEIFISDNRA----HCVKVFNYE-----GQY--LRQIGGEGITNYPIGVGINSNGEILIA--DNHNNFNLTIFTQD 237 (286)
T ss_dssp ECSSSEEEEEEGGG----TEEEEEETT-----CCE--EEEESCTTTSCSEEEEEECTTCCEEEE--ECSSSCEEEEECTT
T ss_pred ECCCCCEEEEECCC----CEEEEEcCC-----CCE--EEEEccCCccCCCcEEEECCCCCEEEE--eCCCCEEEEEECCC
Confidence 43 48888776544 377777543 112 22333221 1 2334566677888888 52332149999998
Q ss_pred CCeEEEEEEe
Q 018497 318 SDTFKCIGVH 327 (355)
Q Consensus 318 t~~~~~v~~~ 327 (355)
.+.+..+...
T Consensus 238 g~~~~~~~~~ 247 (286)
T 1q7f_A 238 GQLISALESK 247 (286)
T ss_dssp SCEEEEEEES
T ss_pred CCEEEEEccc
Confidence 8877777543
No 66
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=91.22 E-value=6.4 Score=33.54 Aligned_cols=112 Identities=13% Similarity=0.031 Sum_probs=66.3
Q ss_pred eEeCceEEEEEeeeccCCCCCCcEEEEEEcCCcee-eEecCCCCCCCCCCceEEEEECCeEEEEEecCCCCccEEEEEEe
Q 018497 187 VFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIF-QTVMMPYDLSTDDADKYLNVFDGYLCVFATIPNNTFRSYELWVM 265 (355)
Q Consensus 187 v~~~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~-~~i~lP~~~~~~~~~~~L~~~~G~L~~v~~~~~~~~~~l~iW~l 265 (355)
...++.||.+.... ..+.+||..+.+- ..++.+ .. ...|+.-+++|++... . . .|+.+
T Consensus 102 t~~g~~Ly~ltw~~--------~~v~V~D~~Tl~~~~ti~~~-~e-----GwGLt~Dg~~L~vSdG-s----~--~l~~i 160 (268)
T 3nok_A 102 ASDGERLYQLTWTE--------GLLFTWSGMPPQRERTTRYS-GE-----GWGLCYWNGKLVRSDG-G----T--MLTFH 160 (268)
T ss_dssp EECSSCEEEEESSS--------CEEEEEETTTTEEEEEEECS-SC-----CCCEEEETTEEEEECS-S----S--EEEEE
T ss_pred EEeCCEEEEEEccC--------CEEEEEECCcCcEEEEEeCC-Cc-----eeEEecCCCEEEEECC-C----C--EEEEE
Confidence 34567888887655 6899999987655 556665 32 2345666677777653 2 2 35666
Q ss_pred ccCCCCCCeEEEEEecCCCc-----eeEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeE-EEEEEe
Q 018497 266 KEYGLTESWTKLYTIEKPQR-----IWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTF-KCIGVH 327 (355)
Q Consensus 266 ~~~~~~~~W~~~~~i~~~~~-----~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~~-~~v~~~ 327 (355)
+-.. . ..+.+|..... ...-+. +.+|+||.. . ...+.+...|++|+++ ..+...
T Consensus 161 Dp~T--~--~v~~~I~V~~~g~~v~~lNeLe-~~dG~lyan--v-w~s~~I~vIDp~TG~V~~~Idl~ 220 (268)
T 3nok_A 161 EPDG--F--ALVGAVQVKLRGQPVELINELE-CANGVIYAN--I-WHSSDVLEIDPATGTVVGVIDAS 220 (268)
T ss_dssp CTTT--C--CEEEEEECEETTEECCCEEEEE-EETTEEEEE--E-TTCSEEEEECTTTCBEEEEEECH
T ss_pred cCCC--C--eEEEEEEeCCCCcccccccccE-EeCCEEEEE--E-CCCCeEEEEeCCCCcEEEEEECC
Confidence 6421 1 33344443211 011122 237888877 5 4434699999999997 556654
No 67
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=91.13 E-value=10 Score=35.80 Aligned_cols=108 Identities=8% Similarity=0.001 Sum_probs=64.2
Q ss_pred cEEEEEEcCCceeeE-ecCCCCCCCCCCceEEEEEC-CeEEEEEecCCCCccEEEEEEeccCC-CCCCeEEEEEecCCCc
Q 018497 209 WLIVSFDFAKEIFQT-VMMPYDLSTDDADKYLNVFD-GYLCVFATIPNNTFRSYELWVMKEYG-LTESWTKLYTIEKPQR 285 (355)
Q Consensus 209 ~~Il~fD~~~~~~~~-i~lP~~~~~~~~~~~L~~~~-G~L~~v~~~~~~~~~~l~iW~l~~~~-~~~~W~~~~~i~~~~~ 285 (355)
..|.++|+.+.+... ++.. .....+....+..-+ |.+++...... .++.||-.+..+ .+..|..+.++.....
T Consensus 346 ~~v~v~D~~tg~l~~~i~~g-~~ph~g~g~~~~~p~~g~~~~s~~~~d---~~V~v~d~~~~~~~~~~~~~v~~l~~~g~ 421 (543)
T 1nir_A 346 NKVAVIDSKDRRLSALVDVG-KTPHPGRGANFVHPKYGPVWSTSHLGD---GSISLIGTDPKNHPQYAWKKVAELQGQGG 421 (543)
T ss_dssp TEEEEEETTTTEEEEEEECS-SSBCCTTCEEEEETTTEEEEEEEBSSS---SEEEEEECCTTTCTTTBTSEEEEEECSCS
T ss_pred CeEEEEECCCCeEEEeeccC-CCCCCCCCcccCCCCCccEEEeccCCC---ceEEEEEeCCCCCchhcCeEEEEEEcCCC
Confidence 589999999887644 3432 111111223333334 66665554333 589999987521 1245999999886532
Q ss_pred eeEeEEEeeCCcEEEEEEee--C-C---ceEEEEEeCCCCeEE
Q 018497 286 IWWPLGFTERGKIFIRGECR--H-G---GYGLLVYNPHSDTFK 322 (355)
Q Consensus 286 ~~~~~~~~~~g~i~~~~~~~--~-~---~~~l~~yd~~t~~~~ 322 (355)
....+.++.+|+.+++ .. . + .+.+.+||.+|.+..
T Consensus 422 ~~~~v~~~pdg~~l~v--~~~~~~~~~~~~~v~v~d~~~~~~~ 462 (543)
T 1nir_A 422 GSLFIKTHPKSSHLYV--DTTFNPDARISQSVAVFDLKNLDAK 462 (543)
T ss_dssp CCCCEECCTTCCEEEE--CCTTCSSHHHHTCEEEEETTCTTSC
T ss_pred CceEEEcCCCCCcEEE--ecCCCCCcccCceEEEEECCCCCCC
Confidence 2345677888866666 31 1 1 126999999987653
No 68
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=91.11 E-value=6.4 Score=33.35 Aligned_cols=34 Identities=12% Similarity=0.029 Sum_probs=23.5
Q ss_pred EEeeeCceEEEeecCCCCceEEEEcCCcccEEecCC
Q 018497 97 VVGSCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPR 132 (355)
Q Consensus 97 ~~~s~~GLl~l~~~~~~~~~~~V~NP~T~~~~~LP~ 132 (355)
+.-+.+|.+.+... ....+.++||.+++...+..
T Consensus 74 l~~~~dg~l~v~~~--~~~~i~~~d~~~g~~~~~~~ 107 (296)
T 3e5z_A 74 HCLNKQGHLIACSH--GLRRLERQREPGGEWESIAD 107 (296)
T ss_dssp EEECTTCCEEEEET--TTTEEEEECSTTCCEEEEEC
T ss_pred eeECCCCcEEEEec--CCCeEEEEcCCCCcEEEEee
Confidence 44445777666652 45789999999998876643
No 69
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=90.94 E-value=6.4 Score=33.03 Aligned_cols=112 Identities=12% Similarity=0.017 Sum_probs=67.5
Q ss_pred eEeCceEEEEEeeeccCCCCCCcEEEEEEcCCcee-eEecCCCCCCCCCCceEEEEECCeEEEEEecCCCCccEEEEEEe
Q 018497 187 VFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIF-QTVMMPYDLSTDDADKYLNVFDGYLCVFATIPNNTFRSYELWVM 265 (355)
Q Consensus 187 v~~~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~-~~i~lP~~~~~~~~~~~L~~~~G~L~~v~~~~~~~~~~l~iW~l 265 (355)
...++.+|-+.... ..+.+||..+-+- ..++.| . ....|+.-+++|++... . .+ |+++
T Consensus 71 ~~~~~~ly~ltw~~--------~~v~v~D~~tl~~~~ti~~~-~-----~Gwglt~dg~~L~vSdg-s----~~--l~~i 129 (243)
T 3mbr_X 71 VAWRDRLIQLTWRN--------HEGFVYDLATLTPRARFRYP-G-----EGWALTSDDSHLYMSDG-T----AV--IRKL 129 (243)
T ss_dssp EEETTEEEEEESSS--------SEEEEEETTTTEEEEEEECS-S-----CCCEEEECSSCEEEECS-S----SE--EEEE
T ss_pred EEeCCEEEEEEeeC--------CEEEEEECCcCcEEEEEeCC-C-----CceEEeeCCCEEEEECC-C----Ce--EEEE
Confidence 45678999987665 7899999987655 556666 3 23456655677877653 2 24 5677
Q ss_pred ccCCCCCCeEEEEEecCCCc-----eeEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeE-EEEEEe
Q 018497 266 KEYGLTESWTKLYTIEKPQR-----IWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTF-KCIGVH 327 (355)
Q Consensus 266 ~~~~~~~~W~~~~~i~~~~~-----~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~~-~~v~~~ 327 (355)
+-. .=..+.+|..... ...-+. ..+|+||.. . ...+.+.+.|++|+++ ..+...
T Consensus 130 Dp~----t~~~~~~I~V~~~g~~~~~lNeLe-~~~G~lyan--v-w~s~~I~vIDp~tG~V~~~idl~ 189 (243)
T 3mbr_X 130 DPD----TLQQVGSIKVTAGGRPLDNLNELE-WVNGELLAN--V-WLTSRIARIDPASGKVVAWIDLQ 189 (243)
T ss_dssp CTT----TCCEEEEEECEETTEECCCEEEEE-EETTEEEEE--E-TTTTEEEEECTTTCBEEEEEECG
T ss_pred eCC----CCeEEEEEEEccCCcccccceeeE-EeCCEEEEE--E-CCCCeEEEEECCCCCEEEEEECC
Confidence 642 1233344443211 010111 247888876 5 3333699999999997 455654
No 70
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=90.62 E-value=7.9 Score=33.58 Aligned_cols=132 Identities=13% Similarity=0.103 Sum_probs=66.9
Q ss_pred ceEEEEcCCcccEEecCCCCCCCceeEEEEecCCCCCCcEEEE---------EEcCCC--ceeEeccCC-Cc--eeeecc
Q 018497 115 SLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVV---------YSLRSN--SWKNIAYGF-PR--SIEINR 180 (355)
Q Consensus 115 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykvv---------yss~t~--~W~~~~~~~-p~--~~~~~~ 180 (355)
..++++|+.|++....-.........++.+|+. .+ .-|. |+..+. .=..+.... +. ......
T Consensus 69 ~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~---g~-l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~ 144 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGKNLFYLPHGLSIDTD---GN-YWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQ 144 (329)
T ss_dssp CCEEEECTTTCCEEEEECTTTCSSEEEEEECTT---SC-EEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSS
T ss_pred CcEEEEECCCCeEEeccCCCccCCceEEEECCC---CC-EEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCC
Confidence 369999999988764322111112266777764 33 2222 554433 111121000 00 000001
Q ss_pred ccccceeEe---CceEEEEEe-eeccCCCCCCcEEEEEEcCCceeeEecCCCCCC------CCCCceEEEEE-C-CeEEE
Q 018497 181 SHINSSVFL---NGSVHWCAR-FSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLS------TDDADKYLNVF-D-GYLCV 248 (355)
Q Consensus 181 ~~~~~~v~~---~G~lyw~~~-~~~~~~~~~~~~Il~fD~~~~~~~~i~lP~~~~------~~~~~~~L~~~-~-G~L~~ 248 (355)
.. ++.+ +|.+|+... .. ..|..||........+..+ ... .......++.. + |.|++
T Consensus 145 P~---~ia~~~~~g~lyv~d~~~~--------~~I~~~~~~g~~~~~~~~~-g~~~~~~~~~~~~p~gia~d~~~g~l~v 212 (329)
T 3fvz_A 145 PT---DVAVEPSTGAVFVSDGYCN--------SRIVQFSPSGKFVTQWGEE-SSGSSPRPGQFSVPHSLALVPHLDQLCV 212 (329)
T ss_dssp EE---EEEECTTTCCEEEEECSSC--------CEEEEECTTSCEEEEECEE-CCSSSCCTTEESCEEEEEEETTTTEEEE
T ss_pred Cc---EEEEeCCCCeEEEEeCCCC--------CeEEEEcCCCCEEEEeccC-CCCCCCCCcccCCCcEEEEECCCCEEEE
Confidence 11 4444 689999874 33 5899999776665555322 111 00112234443 3 78888
Q ss_pred EEecCCCCccEEEEEEec
Q 018497 249 FATIPNNTFRSYELWVMK 266 (355)
Q Consensus 249 v~~~~~~~~~~l~iW~l~ 266 (355)
+.... ..+.+|..+
T Consensus 213 ~d~~~----~~I~~~~~~ 226 (329)
T 3fvz_A 213 ADREN----GRIQCFKTD 226 (329)
T ss_dssp EETTT----TEEEEEETT
T ss_pred EECCC----CEEEEEECC
Confidence 77654 488888766
No 71
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=90.40 E-value=7.1 Score=32.70 Aligned_cols=192 Identities=9% Similarity=0.023 Sum_probs=99.2
Q ss_pred EEEeeeCceEEEeecCCCCceEEEEcCCcccEEecCCCCCCCceeEEEEecCCCCCCcE-------EEE-EEcCCCceeE
Q 018497 96 DVVGSCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDF-------KVV-YSLRSNSWKN 167 (355)
Q Consensus 96 ~~~~s~~GLl~l~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~g~d~~~~~~~~y-------kvv-yss~t~~W~~ 167 (355)
.+....+|.+.+... ....++++||. ++...+..+.......++.+|+. ..-| +|. |+. ++..+.
T Consensus 61 ~i~~~~~g~l~v~~~--~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~---g~l~v~~~~~~~i~~~d~-~g~~~~ 133 (299)
T 2z2n_A 61 CLTISSDGEVWFTEN--AANKIGRITKK-GIIKEYTLPNPDSAPYGITEGPN---GDIWFTEMNGNRIGRITD-DGKIRE 133 (299)
T ss_dssp EEEECTTSCEEEEET--TTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTT---SCEEEEETTTTEEEEECT-TCCEEE
T ss_pred eEEECCCCCEEEeCC--CCCeEEEECCC-CcEEEEeCCCcCCCceeeEECCC---CCEEEEecCCceEEEECC-CCCEEE
Confidence 344445777766652 45678999986 55544432211222356666654 2211 111 555 454444
Q ss_pred eccCCCceeeeccccccceeEe--CceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEecCCCCCCCCCCceEEEEE-CC
Q 018497 168 IAYGFPRSIEINRSHINSSVFL--NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF-DG 244 (355)
Q Consensus 168 ~~~~~p~~~~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i~lP~~~~~~~~~~~L~~~-~G 244 (355)
.. . +... .... ++.+ +|.+|+..... ..|..+|+ ++++..+.+| .... ....++.. +|
T Consensus 134 ~~-~-~~~~--~~~~---~i~~~~~g~l~v~~~~~--------~~i~~~~~-~g~~~~~~~~-~~~~--~~~~i~~~~~g 194 (299)
T 2z2n_A 134 YE-L-PNKG--SYPS---FITLGSDNALWFTENQN--------NAIGRITE-SGDITEFKIP-TPAS--GPVGITKGNDD 194 (299)
T ss_dssp EE-C-SSTT--CCEE---EEEECTTSCEEEEETTT--------TEEEEECT-TCCEEEEECS-STTC--CEEEEEECTTS
T ss_pred ec-C-CCCC--CCCc---eEEEcCCCCEEEEeCCC--------CEEEEEcC-CCcEEEeeCC-CCCC--cceeEEECCCC
Confidence 33 1 1100 0011 3333 57887765432 58999999 7777776555 3321 22234443 48
Q ss_pred eEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEEEE
Q 018497 245 YLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFKCI 324 (355)
Q Consensus 245 ~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~~~~v 324 (355)
+|++..... ..+.++.. . ..... ..++........+++..+|.+++. ...++ .+..||+ +++++.+
T Consensus 195 ~l~v~~~~~----~~i~~~~~-~----g~~~~-~~~~~~~~~~~~i~~~~~g~l~v~--~~~~~-~i~~~d~-~g~~~~~ 260 (299)
T 2z2n_A 195 ALWFVEIIG----NKIGRITT-S----GEITE-FKIPTPNARPHAITAGAGIDLWFT--EWGAN-KIGRLTS-NNIIEEY 260 (299)
T ss_dssp SEEEEETTT----TEEEEECT-T----CCEEE-EECSSTTCCEEEEEECSTTCEEEE--ETTTT-EEEEEET-TTEEEEE
T ss_pred CEEEEccCC----ceEEEECC-C----CcEEE-EECCCCCCCceeEEECCCCCEEEe--ccCCc-eEEEECC-CCceEEE
Confidence 887776543 35555543 1 22322 223321112334556667888887 52334 5999999 5666665
Q ss_pred EEe
Q 018497 325 GVH 327 (355)
Q Consensus 325 ~~~ 327 (355)
...
T Consensus 261 ~~~ 263 (299)
T 2z2n_A 261 PIQ 263 (299)
T ss_dssp ECS
T ss_pred eCC
Confidence 443
No 72
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=90.20 E-value=8.6 Score=33.31 Aligned_cols=119 Identities=13% Similarity=0.167 Sum_probs=65.4
Q ss_pred eCce-EEEEEeeeccCCCCCCcEEEEEEcC--CceeeEe----cCCCCCCCC-CCceEEEEE-CCe-EEEEEecCCCCcc
Q 018497 189 LNGS-VHWCARFSCYHDNSCPWLIVSFDFA--KEIFQTV----MMPYDLSTD-DADKYLNVF-DGY-LCVFATIPNNTFR 258 (355)
Q Consensus 189 ~~G~-lyw~~~~~~~~~~~~~~~Il~fD~~--~~~~~~i----~lP~~~~~~-~~~~~L~~~-~G~-L~~v~~~~~~~~~ 258 (355)
-+|. +|...... ..|..||+. +.++..+ ..| ..... .....++.. +|+ |++....+ .
T Consensus 196 pdg~~l~v~~~~~--------~~v~v~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~i~~spdG~~l~v~~~~~----~ 262 (347)
T 3hfq_A 196 PDGQYAFLAGELS--------SQIASLKYDTQTGAFTQLGIVKTIP-ADYTAHNGAAAIRLSHDGHFLYVSNRGY----N 262 (347)
T ss_dssp TTSSEEEEEETTT--------TEEEEEEEETTTTEEEEEEEEESSC-TTCCSCCEEEEEEECTTSCEEEEEEETT----T
T ss_pred CCCCEEEEEeCCC--------CEEEEEEecCCCCceEEeeeeeecC-CCCCCCCcceeEEECCCCCEEEEEeCCC----C
Confidence 4676 55544332 456666655 5666443 233 22111 112223333 466 55555444 5
Q ss_pred EEEEEEeccCCCCCCeEEEEEecCCCceeEeEEEeeCCc-EEEEEEeeCCceEEEEE--eCCCCeEEEEEE
Q 018497 259 SYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGK-IFIRGECRHGGYGLLVY--NPHSDTFKCIGV 326 (355)
Q Consensus 259 ~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~-i~~~~~~~~~~~~l~~y--d~~t~~~~~v~~ 326 (355)
.+.+|.++.. ..+..+..++.......-+++..+|+ |++. ...++ .+.+| |.++++++.+.-
T Consensus 263 ~v~v~~~~~~---g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~--~~~~~-~v~v~~~d~~tg~l~~~~~ 327 (347)
T 3hfq_A 263 TLAVFAVTAD---GHLTLIQQISTEGDFPRDFDLDPTEAFVVVV--NQNTD-NATLYARDLTSGKLSLLQK 327 (347)
T ss_dssp EEEEEEECGG---GCEEEEEEEECSSSCCCEEEECTTSSEEEEE--ETTTT-EEEEEEECTTTCCEEEEEE
T ss_pred EEEEEEECCC---CcEEEeEEEecCCCCcCeEEECCCCCEEEEE--EcCCC-cEEEEEEeCCCCeEEeccc
Confidence 8999999852 34666666655221234567778886 5555 42234 36666 889999988754
No 73
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=90.04 E-value=8.9 Score=33.27 Aligned_cols=97 Identities=9% Similarity=0.178 Sum_probs=60.3
Q ss_pred cEEEEEEcCCceeeEe-cCCCCCCCCCCceEEEEEC----CeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCC
Q 018497 209 WLIVSFDFAKEIFQTV-MMPYDLSTDDADKYLNVFD----GYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKP 283 (355)
Q Consensus 209 ~~Il~fD~~~~~~~~i-~lP~~~~~~~~~~~L~~~~----G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~ 283 (355)
..|..+|+..++...+ .+. ... ..+.-+... |.+.+....+ ..+.||.++. ..|.....+...
T Consensus 33 g~i~iw~~~~~~~~~~~~~~-~h~---~~v~~~~~~~~~~~~~l~s~~~d----g~v~iwd~~~----~~~~~~~~~~~~ 100 (379)
T 3jrp_A 33 KTIKIFEVEGETHKLIDTLT-GHE---GPVWRVDWAHPKFGTILASCSYD----GKVLIWKEEN----GRWSQIAVHAVH 100 (379)
T ss_dssp SCEEEEEEETTEEEEEEEEC-CCS---SCEEEEEECCGGGCSEEEEEETT----SCEEEEEEET----TEEEEEEEECCC
T ss_pred CcEEEEecCCCcceeeeEec-CCC---CcEEEEEeCCCCCCCEEEEeccC----CEEEEEEcCC----CceeEeeeecCC
Confidence 4688899887666555 333 222 122222322 6666666655 4899999986 457776666543
Q ss_pred CceeEeEEEeeC--CcEEEEEEeeCCceEEEEEeCCCCe
Q 018497 284 QRIWWPLGFTER--GKIFIRGECRHGGYGLLVYNPHSDT 320 (355)
Q Consensus 284 ~~~~~~~~~~~~--g~i~~~~~~~~~~~~l~~yd~~t~~ 320 (355)
......+.+..+ +..++. ...++ .+.+||++++.
T Consensus 101 ~~~v~~~~~~~~~~~~~l~~--~~~d~-~i~v~d~~~~~ 136 (379)
T 3jrp_A 101 SASVNSVQWAPHEYGPLLLV--ASSDG-KVSVVEFKENG 136 (379)
T ss_dssp SSCEEEEEECCGGGCSEEEE--EETTS-EEEEEECCTTS
T ss_pred CcceEEEEeCCCCCCCEEEE--ecCCC-cEEEEecCCCC
Confidence 323555666666 766666 43667 49999999874
No 74
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=89.70 E-value=8.7 Score=32.63 Aligned_cols=67 Identities=6% Similarity=0.115 Sum_probs=41.2
Q ss_pred CeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEeEEEeeCC---cEEEEEEeeCCceEEEEEeCCCC
Q 018497 244 GYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERG---KIFIRGECRHGGYGLLVYNPHSD 319 (355)
Q Consensus 244 G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g---~i~~~~~~~~~~~~l~~yd~~t~ 319 (355)
+++.+.+..+ ..+.||.++.. +..|.....+.........+.+..++ ..++. ...++ .+.+||+++.
T Consensus 170 ~~~l~sgs~D----~~v~lwd~~~~--~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las--~s~D~-~v~iWd~~~~ 239 (297)
T 2pm7_B 170 SRKFVTGGAD----NLVKIWKYNSD--AQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMAS--VSQDR-TCIIWTQDNE 239 (297)
T ss_dssp CCEEEEEETT----SCEEEEEEETT--TTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEE--EETTS-CEEEEEESST
T ss_pred cceEEEEcCC----CcEEEEEEcCC--CceEEEEEEecCCCCceEEEEECCCCCCceEEEE--EECCC-cEEEEEeCCC
Confidence 4555555555 48999998752 24566666665333235556666653 55555 43566 4899998764
No 75
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=89.38 E-value=9.2 Score=32.50 Aligned_cols=106 Identities=14% Similarity=0.138 Sum_probs=61.6
Q ss_pred CceEEEEEeeeccCCCCCCcEEEEEEcCCceeeE-ecCCCCCCCCCCceEEEEE-CCeEEEEEecCCCCccEEEEEEecc
Q 018497 190 NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQT-VMMPYDLSTDDADKYLNVF-DGYLCVFATIPNNTFRSYELWVMKE 267 (355)
Q Consensus 190 ~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~-i~lP~~~~~~~~~~~L~~~-~G~L~~v~~~~~~~~~~l~iW~l~~ 267 (355)
+|.....+... ..|..||+.+.+... +..+ .. ...+.-. +|++.++...+ ..+.+|.++.
T Consensus 194 ~~~~l~~~~~d--------g~i~~~d~~~~~~~~~~~~~-~~-----v~~~~~s~~~~~l~~~~~~----~~i~~~~~~~ 255 (337)
T 1gxr_A 194 DGTKLWTGGLD--------NTVRSWDLREGRQLQQHDFT-SQ-----IFSLGYCPTGEWLAVGMES----SNVEVLHVNK 255 (337)
T ss_dssp TSSEEEEEETT--------SEEEEEETTTTEEEEEEECS-SC-----EEEEEECTTSSEEEEEETT----SCEEEEETTS
T ss_pred CCCEEEEEecC--------CcEEEEECCCCceEeeecCC-Cc-----eEEEEECCCCCEEEEEcCC----CcEEEEECCC
Confidence 56555554433 589999998776533 3333 21 1223322 46666666555 4899998875
Q ss_pred CCCCCCeEEEEEecCCCceeEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEEE
Q 018497 268 YGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFKC 323 (355)
Q Consensus 268 ~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~~~~ 323 (355)
. . . ..+.........+.+..+|+.++. ...++ .+..||+++++...
T Consensus 256 ~---~---~-~~~~~~~~~v~~~~~~~~~~~l~~--~~~dg-~i~~~~~~~~~~~~ 301 (337)
T 1gxr_A 256 P---D---K-YQLHLHESCVLSLKFAYCGKWFVS--TGKDN-LLNAWRTPYGASIF 301 (337)
T ss_dssp S---C---E-EEECCCSSCEEEEEECTTSSEEEE--EETTS-EEEEEETTTCCEEE
T ss_pred C---C---e-EEEcCCccceeEEEECCCCCEEEE--ecCCC-cEEEEECCCCeEEE
Confidence 2 1 1 122221113455666777877766 43566 59999999987653
No 76
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=89.35 E-value=8.2 Score=31.89 Aligned_cols=188 Identities=13% Similarity=0.070 Sum_probs=91.4
Q ss_pred EEEeeeCceEEE-eecCCCCceEEEEcCCcccEEecCCCCCCCceeEEEEecCCCCCCcE------EEE-EEcCCCceeE
Q 018497 96 DVVGSCNGVLCF-CSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDF------KVV-YSLRSNSWKN 167 (355)
Q Consensus 96 ~~~~s~~GLl~l-~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~g~d~~~~~~~~y------kvv-yss~t~~W~~ 167 (355)
.+....+|-+.+ ... ....+.++|+.++....++..... ...++.+|+. +.-| +|. |+..++.-+.
T Consensus 28 ~i~~~~~g~l~v~~~~--~~~~i~~~~~~~~~~~~~~~~~~~-~p~~i~~~~~---g~l~v~~~~~~i~~~d~~~~~~~~ 101 (270)
T 1rwi_B 28 GVAVDSAGNVYVTSEG--MYGRVVKLATGSTGTTVLPFNGLY-QPQGLAVDGA---GTVYVTDFNNRVVTLAAGSNNQTV 101 (270)
T ss_dssp EEEECTTCCEEEEECS--SSCEEEEECC-----EECCCCSCC-SCCCEEECTT---CCEEEEETTTEEEEECTTCSCCEE
T ss_pred ceEECCCCCEEEEccC--CCCcEEEecCCCcccceEeeCCcC-CcceeEECCC---CCEEEEcCCCEEEEEeCCCceEee
Confidence 344445676666 532 467888999988776665432211 1245666654 3211 222 5555543332
Q ss_pred eccCCCceeeeccccccceeEe--CceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEecCCCCCCCCCCceEEEEE-CC
Q 018497 168 IAYGFPRSIEINRSHINSSVFL--NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF-DG 244 (355)
Q Consensus 168 ~~~~~p~~~~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i~lP~~~~~~~~~~~L~~~-~G 244 (355)
.. ..... ... ++.+ +|.+|+..... ..|..+|..+......... ... ....++.. +|
T Consensus 102 ~~-~~~~~----~p~---~i~~~~~g~l~v~~~~~--------~~i~~~~~~~~~~~~~~~~--~~~--~p~~i~~~~~g 161 (270)
T 1rwi_B 102 LP-FDGLN----YPE---GLAVDTQGAVYVADRGN--------NRVVKLAAGSKTQTVLPFT--GLN--DPDGVAVDNSG 161 (270)
T ss_dssp CC-CCSCS----SEE---EEEECTTCCEEEEEGGG--------TEEEEECTTCCSCEECCCC--SCC--SCCCEEECTTC
T ss_pred ee-cCCcC----CCc---ceEECCCCCEEEEECCC--------CEEEEEECCCceeEeeccc--cCC--CceeEEEeCCC
Confidence 22 11000 011 3333 68888765543 5788898776554433211 111 11223433 58
Q ss_pred eEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCc-eeEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEEE
Q 018497 245 YLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQR-IWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFKC 323 (355)
Q Consensus 245 ~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~-~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~~~~ 323 (355)
+|++..... ..+.+|..+. .. .. ....... ...-+++..+|.+++. ...++ .+..||++++....
T Consensus 162 ~l~v~~~~~----~~i~~~~~~~---~~---~~-~~~~~~~~~p~~i~~d~~g~l~v~--~~~~~-~v~~~~~~~~~~~~ 227 (270)
T 1rwi_B 162 NVYVTDTDN----NRVVKLEAES---NN---QV-VLPFTDITAPWGIAVDEAGTVYVT--EHNTN-QVVKLLAGSTTSTV 227 (270)
T ss_dssp CEEEEEGGG----TEEEEECTTT---CC---EE-ECCCSSCCSEEEEEECTTCCEEEE--ETTTS-CEEEECTTCSCCEE
T ss_pred CEEEEECCC----CEEEEEecCC---Cc---eE-eecccCCCCceEEEECCCCCEEEE--ECCCC-cEEEEcCCCCccee
Confidence 888776543 3665555432 11 11 1111111 2334556667788888 52344 59999998876544
No 77
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=89.15 E-value=4.7 Score=36.43 Aligned_cols=123 Identities=9% Similarity=0.051 Sum_probs=70.8
Q ss_pred CceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEe-cCC-C-------CCCCCCCceEEEEE--CCeEEEEEecCC---C
Q 018497 190 NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTV-MMP-Y-------DLSTDDADKYLNVF--DGYLCVFATIPN---N 255 (355)
Q Consensus 190 ~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i-~lP-~-------~~~~~~~~~~L~~~--~G~L~~v~~~~~---~ 255 (355)
+|.++|....+ .+.++|+.++.-..+ +.. + .....+.. .++.. +++||+...... .
T Consensus 237 dG~~~~vs~~g---------~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q-~~a~~~~~~~lyV~~~~~~~~~h 306 (386)
T 3sjl_D 237 AGRLVWPTYTG---------KIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQ-QVAYHRALDRIYLLVDQRDEWRH 306 (386)
T ss_dssp TTEEEEEBTTS---------EEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSS-CEEEETTTTEEEEEEEECCTTCT
T ss_pred CCcEEEEeCCC---------EEEEEECCCCcceeecceeccccccccccccCCCcc-eeeECCCCCeEEEEecccccccc
Confidence 78888877654 799999987764433 110 0 00011111 12333 368888765321 0
Q ss_pred CccEEEEEEeccCCCCCCeEEEEEecCCCceeEeEEEeeCCc-EEEEEEeeCCceEEEEEeCCCCeE-EEEEEecC
Q 018497 256 TFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGK-IFIRGECRHGGYGLLVYNPHSDTF-KCIGVHLP 329 (355)
Q Consensus 256 ~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~-i~~~~~~~~~~~~l~~yd~~t~~~-~~v~~~~~ 329 (355)
....-+||+++- ..+..+.+|+... ...-+++..+|+ .++.. ...++ .+.+||..|++. +.+...+.
T Consensus 307 k~~~~~V~viD~----~t~kv~~~i~vg~-~~~~lavs~D~~~~ly~t-n~~~~-~VsViD~~t~k~~~~i~~~~~ 375 (386)
T 3sjl_D 307 KTASRFVVVLDA----KTGERLAKFEMGH-EIDSINVSQDEKPLLYAL-STGDK-TLYIHDAESGEELRSVNQLGH 375 (386)
T ss_dssp TSCEEEEEEEET----TTCCEEEEEEEEE-EECEEEECSSSSCEEEEE-ETTTT-EEEEEETTTCCEEEEECCCCS
T ss_pred CCCCCEEEEEEC----CCCeEEEEEECCC-CcceEEECCCCCeEEEEE-cCCCC-eEEEEECCCCcEEEEecCCCC
Confidence 113567999986 4567777776653 233477778875 44441 42345 599999999886 44554443
No 78
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=88.79 E-value=5.2 Score=35.89 Aligned_cols=113 Identities=7% Similarity=-0.133 Sum_probs=62.1
Q ss_pred CceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEe-cCCCCCCCCCCceEEEEE--CCeEEEEEecCCCCccEEEEEEec
Q 018497 190 NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTV-MMPYDLSTDDADKYLNVF--DGYLCVFATIPNNTFRSYELWVMK 266 (355)
Q Consensus 190 ~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i-~lP~~~~~~~~~~~L~~~--~G~L~~v~~~~~~~~~~l~iW~l~ 266 (355)
+|.++...... ..|..+|+.+.+.... +.+ ..........-+.. +|++++....+ ..+.+|.++
T Consensus 133 ~~~~~~~~~~~--------~~i~~~d~~~g~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~s~~~d----~~v~~~d~~ 199 (433)
T 3bws_A 133 NTRLAIPLLED--------EGMDVLDINSGQTVRLSPPE-KYKKKLGFVETISIPEHNELWVSQMQA----NAVHVFDLK 199 (433)
T ss_dssp SSEEEEEBTTS--------SSEEEEETTTCCEEEECCCH-HHHTTCCEEEEEEEGGGTEEEEEEGGG----TEEEEEETT
T ss_pred CCeEEEEeCCC--------CeEEEEECCCCeEeeecCcc-cccccCCceeEEEEcCCCEEEEEECCC----CEEEEEECC
Confidence 56666655433 4699999998776543 221 11011112222222 47777766655 489999886
Q ss_pred cCCCCCCeEEEEEecCCCceeEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEEE
Q 018497 267 EYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFKC 323 (355)
Q Consensus 267 ~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~~~~ 323 (355)
. . ....++.........+++..+|..++.. ...++ .+..||+++++...
T Consensus 200 ~----~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~-~i~~~d~~~~~~~~ 248 (433)
T 3bws_A 200 T----L--AYKATVDLTGKWSKILLYDPIRDLVYCS-NWISE-DISVIDRKTKLEIR 248 (433)
T ss_dssp T----C--CEEEEEECSSSSEEEEEEETTTTEEEEE-ETTTT-EEEEEETTTTEEEE
T ss_pred C----c--eEEEEEcCCCCCeeEEEEcCCCCEEEEE-ecCCC-cEEEEECCCCcEEE
Confidence 4 1 2223333222134456667777555441 32355 59999999887643
No 79
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=88.74 E-value=10 Score=32.30 Aligned_cols=101 Identities=8% Similarity=-0.033 Sum_probs=53.0
Q ss_pred cEEEEEEcCCceeeEecCCCCCCCCCCceEEEEEC-CeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCcee
Q 018497 209 WLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVFD-GYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIW 287 (355)
Q Consensus 209 ~~Il~fD~~~~~~~~i~lP~~~~~~~~~~~L~~~~-G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~ 287 (355)
..+..+|+....-...... ..........+.... +.+.+....+ ..+.+|.++. ......+.......
T Consensus 150 ~~~~~~d~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~s~~~d----~~i~i~d~~~------~~~~~~~~~h~~~v 218 (340)
T 4aow_A 150 KTIKLWNTLGVCKYTVQDE-SHSEWVSCVRFSPNSSNPIIVSCGWD----KLVKVWNLAN------CKLKTNHIGHTGYL 218 (340)
T ss_dssp SCEEEECTTSCEEEEECSS-SCSSCEEEEEECSCSSSCEEEEEETT----SCEEEEETTT------TEEEEEECCCSSCE
T ss_pred CeEEEEEeCCCceEEEEec-cccCcccceEEccCCCCcEEEEEcCC----CEEEEEECCC------CceeeEecCCCCcE
Confidence 3577788776655444333 222110111111112 2344444444 4889998764 23333333222134
Q ss_pred EeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEEE
Q 018497 288 WPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFKC 323 (355)
Q Consensus 288 ~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~~~~ 323 (355)
..+++..+|.+++. ...++ .+.+||+++.+...
T Consensus 219 ~~~~~s~~~~~l~s--~s~Dg-~i~iwd~~~~~~~~ 251 (340)
T 4aow_A 219 NTVTVSPDGSLCAS--GGKDG-QAMLWDLNEGKHLY 251 (340)
T ss_dssp EEEEECTTSSEEEE--EETTC-EEEEEETTTTEEEE
T ss_pred EEEEECCCCCEEEE--EeCCC-eEEEEEeccCceee
Confidence 45666777877777 43666 49999999877543
No 80
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=88.65 E-value=11 Score=32.37 Aligned_cols=106 Identities=8% Similarity=0.146 Sum_probs=54.9
Q ss_pred cEEEEEEcCC-ceeeEe-cCCCCCCCCCCceEEEEE-CC----eEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEec
Q 018497 209 WLIVSFDFAK-EIFQTV-MMPYDLSTDDADKYLNVF-DG----YLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIE 281 (355)
Q Consensus 209 ~~Il~fD~~~-~~~~~i-~lP~~~~~~~~~~~L~~~-~G----~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~ 281 (355)
..|..+|+.+ +.|..+ .+. .... ....+.-. +| .+.+....+ ..+.||.++... ...|.....-.
T Consensus 189 ~~v~lWd~~~~~~~~~~~~l~-~h~~--~V~~v~~sp~~~~~~~~las~s~D----~~v~iw~~~~~~-~~~~~~~~~~~ 260 (316)
T 3bg1_A 189 NLIKLWKEEEDGQWKEEQKLE-AHSD--WVRDVAWAPSIGLPTSTIASCSQD----GRVFIWTCDDAS-SNTWSPKLLHK 260 (316)
T ss_dssp SBCCEEEECTTSCEEEEECCB-CCSS--CEEEEECCCCSSCSCCEEEEEETT----CEEEEEECSSTT-CCCCBCCEEEE
T ss_pred CeEEEEEeCCCCccceeeecc-cCCC--ceEEEEecCCCCCCCceEEEEcCC----CeEEEEEccCcc-ccchhhhhhhc
Confidence 4677788864 345444 333 2221 11122211 12 455555554 499999987632 12343211111
Q ss_pred CCCceeEeEEEeeCCcEEEEEEeeCCceEEEEEeCC-CCeEEEEEE
Q 018497 282 KPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPH-SDTFKCIGV 326 (355)
Q Consensus 282 ~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~-t~~~~~v~~ 326 (355)
... ....+++..+|.+++. ...++ .+.+||.. .+.|+.+..
T Consensus 261 ~~~-~v~~v~~sp~g~~las--~~~D~-~v~lw~~~~~g~~~~~~~ 302 (316)
T 3bg1_A 261 FND-VVWHVSWSITANILAV--SGGDN-KVTLWKESVDGQWVCISD 302 (316)
T ss_dssp CSS-CEEEEEECTTTCCEEE--EESSS-CEEEEEECTTSCEEEEEE
T ss_pred CCC-cEEEEEEcCCCCEEEE--EcCCC-eEEEEEECCCCcEEEeee
Confidence 111 2445667778876666 43666 48888875 456777644
No 81
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=88.41 E-value=11 Score=32.35 Aligned_cols=66 Identities=9% Similarity=0.112 Sum_probs=39.8
Q ss_pred CeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCC--CceeEeEEEeeCCcEEEEEEeeCCceEEEEEeCCC
Q 018497 244 GYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKP--QRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHS 318 (355)
Q Consensus 244 G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~--~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t 318 (355)
|++.+++..+ ..+.+|.++... ........+... ......+.+..+|..++. ...++ .+.+||+.+
T Consensus 299 ~~~l~~~~~d----g~i~vwd~~~~~--~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s--~~~dg-~i~iwd~~~ 366 (366)
T 3k26_A 299 QKMLALGNQV----GKLYVWDLEVED--PHKAKCTTLTHHKCGAAIRQTSFSRDSSILIA--VCDDA-SIWRWDRLR 366 (366)
T ss_dssp SSEEEEECTT----SCEEEEECCSSS--GGGCEEEEECCTTCCSCEEEEEECTTSSEEEE--EETTS-EEEEEEC--
T ss_pred CcEEEEEecC----CcEEEEECCCCC--CccccceEEcccccCCceEEEEeCCCCCeEEE--EeCCC-EEEEEEecC
Confidence 6666666554 489999998632 222244444433 113555667778877777 43677 499999864
No 82
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=88.25 E-value=13 Score=32.78 Aligned_cols=190 Identities=9% Similarity=0.044 Sum_probs=97.3
Q ss_pred eeeCceEE-EeecCCCCceEEEEcCCcccEEecCCCCCCCceeEEEEecCCCCCCcEEE--------EEEcCCCceeEec
Q 018497 99 GSCNGVLC-FCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKV--------VYSLRSNSWKNIA 169 (355)
Q Consensus 99 ~s~~GLl~-l~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykv--------vyss~t~~W~~~~ 169 (355)
-|-+|-++ +... +.++.+.|||+.+++.+........ ...+.|.|. + .+-+ +++..++.-....
T Consensus 141 fSpDg~~la~as~-~~d~~i~iwd~~~~~~~~~~~~~~~--V~~v~fspd---g-~~l~s~s~~~~~~~~~~~~~~~~~~ 213 (365)
T 4h5i_A 141 ISREGTVAAIASS-KVPAIMRIIDPSDLTEKFEIETRGE--VKDLHFSTD---G-KVVAYITGSSLEVISTVTGSCIARK 213 (365)
T ss_dssp ECTTSSCEEEEES-CSSCEEEEEETTTTEEEEEEECSSC--CCEEEECTT---S-SEEEEECSSCEEEEETTTCCEEEEE
T ss_pred EcCCCCEEEEEEC-CCCCEEEEeECCCCcEEEEeCCCCc--eEEEEEccC---C-ceEEeccceeEEEEEeccCcceeee
Confidence 34466543 3321 2567899999999887765432211 234555553 2 2111 1444444332211
Q ss_pred cCCCceeeeccccccceeEeCceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEe---cCCCCCCCCCCceEEEEE-CCe
Q 018497 170 YGFPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTV---MMPYDLSTDDADKYLNVF-DGY 245 (355)
Q Consensus 170 ~~~p~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i---~lP~~~~~~~~~~~L~~~-~G~ 245 (355)
........... ....-+|.....+... ......+..+|......... .+. .... .-..+... +|+
T Consensus 214 ~~~~~~~~v~~----v~fspdg~~l~~~s~d----~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~--~V~~~~~Spdg~ 282 (365)
T 4h5i_A 214 TDFDKNWSLSK----INFIADDTVLIAASLK----KGKGIVLTKISIKSGNTSVLRSKQVT-NRFK--GITSMDVDMKGE 282 (365)
T ss_dssp CCCCTTEEEEE----EEEEETTEEEEEEEES----SSCCEEEEEEEEETTEEEEEEEEEEE-SSCS--CEEEEEECTTSC
T ss_pred ecCCCCCCEEE----EEEcCCCCEEEEEecC----CcceeEEeecccccceecceeeeeec-CCCC--CeEeEEECCCCC
Confidence 00111111000 0223466665555433 22334577777776655443 222 2111 11223333 477
Q ss_pred EEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCc-eeEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCC
Q 018497 246 LCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQR-IWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSD 319 (355)
Q Consensus 246 L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~-~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~ 319 (355)
+.+.+..+ ..+.||-++. ...+.++...+. ....+++..+|+.++. ...|+ ++.++|+.++
T Consensus 283 ~lasgs~D----~~V~iwd~~~------~~~~~~~~~gH~~~V~~v~fSpdg~~laS--~S~D~-tvrvw~ip~~ 344 (365)
T 4h5i_A 283 LAVLASND----NSIALVKLKD------LSMSKIFKQAHSFAITEVTISPDSTYVAS--VSAAN-TIHIIKLPLN 344 (365)
T ss_dssp EEEEEETT----SCEEEEETTT------TEEEEEETTSSSSCEEEEEECTTSCEEEE--EETTS-EEEEEECCTT
T ss_pred ceEEEcCC----CEEEEEECCC------CcEEEEecCcccCCEEEEEECCCCCEEEE--EeCCC-eEEEEEcCCC
Confidence 76666665 4899998764 244555533222 4566888889988887 43677 5999998654
No 83
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=88.23 E-value=8.7 Score=32.63 Aligned_cols=102 Identities=16% Similarity=0.227 Sum_probs=60.3
Q ss_pred cEEEEEEcCCc--eeeEe-cCCCCCCCCCCceEEEEE---CCeEEEEEecCCCCccEEEEEEeccCC---CCCCeEEEEE
Q 018497 209 WLIVSFDFAKE--IFQTV-MMPYDLSTDDADKYLNVF---DGYLCVFATIPNNTFRSYELWVMKEYG---LTESWTKLYT 279 (355)
Q Consensus 209 ~~Il~fD~~~~--~~~~i-~lP~~~~~~~~~~~L~~~---~G~L~~v~~~~~~~~~~l~iW~l~~~~---~~~~W~~~~~ 279 (355)
..|..+|+.++ .+..+ .+. .... ....+.-. +|.+.+....++ .+.||.++... ....|.....
T Consensus 33 g~i~iw~~~~~~~~~~~~~~~~-~~~~--~v~~~~~~~~~d~~~l~s~~~dg----~v~vwd~~~~~~~~~~~~~~~~~~ 105 (351)
T 3f3f_A 33 QHIKVFKLDKDTSNWELSDSWR-AHDS--SIVAIDWASPEYGRIIASASYDK----TVKLWEEDPDQEECSGRRWNKLCT 105 (351)
T ss_dssp SEEEEEEECSSSCCEEEEEEEE-CCSS--CEEEEEECCGGGCSEEEEEETTS----CEEEEEECTTSCTTSSCSEEEEEE
T ss_pred CeEEEEECCCCCCcceecceec-cCCC--cEEEEEEcCCCCCCEEEEEcCCC----eEEEEecCCCcccccccCcceeee
Confidence 47888898754 22332 222 1111 12233333 377767666654 89999998632 2346777777
Q ss_pred ecCCCceeEeEEEeeC--CcEEEEEEeeCCceEEEEEeCCCCe
Q 018497 280 IEKPQRIWWPLGFTER--GKIFIRGECRHGGYGLLVYNPHSDT 320 (355)
Q Consensus 280 i~~~~~~~~~~~~~~~--g~i~~~~~~~~~~~~l~~yd~~t~~ 320 (355)
+.........+.+..+ +..++. ...++ .+..||+++++
T Consensus 106 ~~~~~~~v~~~~~~~~~~~~~l~~--~~~dg-~v~iwd~~~~~ 145 (351)
T 3f3f_A 106 LNDSKGSLYSVKFAPAHLGLKLAC--LGNDG-ILRLYDALEPS 145 (351)
T ss_dssp ECCCSSCEEEEEECCGGGCSEEEE--EETTC-EEEEEECSSTT
T ss_pred ecccCCceeEEEEcCCCCCcEEEE--ecCCC-cEEEecCCChH
Confidence 7544333555666666 766666 43667 59999998765
No 84
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=88.17 E-value=10 Score=32.50 Aligned_cols=117 Identities=14% Similarity=0.138 Sum_probs=63.1
Q ss_pred eCceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEecCCCCCCCCCCceEEEEE-CCeEEEEEecCCCCccEEEEEEecc
Q 018497 189 LNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF-DGYLCVFATIPNNTFRSYELWVMKE 267 (355)
Q Consensus 189 ~~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i~lP~~~~~~~~~~~L~~~-~G~L~~v~~~~~~~~~~l~iW~l~~ 267 (355)
-+|.+||..... ..|..+|+.+.++..+..+ ... ....++.. +|+|++...........+ +.++.
T Consensus 54 ~~g~l~~~~~~~--------~~i~~~d~~~~~~~~~~~~-~~~---~~~~i~~~~dg~l~v~~~~~~~~~~~i--~~~d~ 119 (333)
T 2dg1_A 54 RQGQLFLLDVFE--------GNIFKINPETKEIKRPFVS-HKA---NPAAIKIHKDGRLFVCYLGDFKSTGGI--FAATE 119 (333)
T ss_dssp TTSCEEEEETTT--------CEEEEECTTTCCEEEEEEC-SSS---SEEEEEECTTSCEEEEECTTSSSCCEE--EEECT
T ss_pred CCCCEEEEECCC--------CEEEEEeCCCCcEEEEeeC-CCC---CcceEEECCCCcEEEEeCCCCCCCceE--EEEeC
Confidence 378888876543 5899999998888765322 111 22334443 588888765431111244 44443
Q ss_pred CCCCCCeEEEEEecCCCceeEeEEEeeCCcEEEEEEeeC------CceEEEEEeCCCCeEEEE
Q 018497 268 YGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRH------GGYGLLVYNPHSDTFKCI 324 (355)
Q Consensus 268 ~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~------~~~~l~~yd~~t~~~~~v 324 (355)
.+ ..-.....-.........+.+..+|.+++. ... .. .++.+|+++++++.+
T Consensus 120 ~~--~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~--~~~~~~~~~~~-~l~~~~~~~~~~~~~ 177 (333)
T 2dg1_A 120 NG--DNLQDIIEDLSTAYCIDDMVFDSKGGFYFT--DFRGYSTNPLG-GVYYVSPDFRTVTPI 177 (333)
T ss_dssp TS--CSCEEEECSSSSCCCEEEEEECTTSCEEEE--ECCCBTTBCCE-EEEEECTTSCCEEEE
T ss_pred CC--CEEEEEEccCccCCcccceEECCCCCEEEE--eccccccCCCc-eEEEEeCCCCEEEEe
Confidence 21 111111110111112334566677888887 411 23 599999998777654
No 85
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=87.26 E-value=18 Score=35.57 Aligned_cols=98 Identities=9% Similarity=0.151 Sum_probs=61.4
Q ss_pred cEEEEEEcCCceeeEe-cCCCCCCCCCCceEEEEE-C--CeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCC
Q 018497 209 WLIVSFDFAKEIFQTV-MMPYDLSTDDADKYLNVF-D--GYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQ 284 (355)
Q Consensus 209 ~~Il~fD~~~~~~~~i-~lP~~~~~~~~~~~L~~~-~--G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~ 284 (355)
..|..+|+.+++...+ .+. .... ....+.-. + |.+.+.+..++ .+.+|.++. ..|.....+....
T Consensus 31 g~I~vwd~~~~~~~~~~~l~-~h~~--~V~~l~~s~~~~~~~l~s~s~Dg----~I~vwd~~~----~~~~~~~~~~~h~ 99 (753)
T 3jro_A 31 KTIKIFEVEGETHKLIDTLT-GHEG--PVWRVDWAHPKFGTILASCSYDG----KVLIWKEEN----GRWSQIAVHAVHS 99 (753)
T ss_dssp TEEEEEEEETTEEEEEEEEC-CCSS--CEEEEEECCTTSCSEEEEEETTS----CEEEEEEET----TEEEEEEEECCCS
T ss_pred CcEEEEecCCCCCccceecc-CCcC--ceEEEEecCCCCCCEEEEEeCCC----eEEEEECCC----CcccccccccCCC
Confidence 5788999887776655 333 2221 11223322 2 66666666654 899999885 4576666665433
Q ss_pred ceeEeEEEeeC--CcEEEEEEeeCCceEEEEEeCCCCe
Q 018497 285 RIWWPLGFTER--GKIFIRGECRHGGYGLLVYNPHSDT 320 (355)
Q Consensus 285 ~~~~~~~~~~~--g~i~~~~~~~~~~~~l~~yd~~t~~ 320 (355)
.....+.+..+ |.+++. ...++ .+.+||++++.
T Consensus 100 ~~V~~v~~sp~~~~~~l~s--gs~dg-~I~vwdl~~~~ 134 (753)
T 3jro_A 100 ASVNSVQWAPHEYGPLLLV--ASSDG-KVSVVEFKENG 134 (753)
T ss_dssp SCEEEEEECCGGGCSEEEE--EETTS-EEEEEECCSSS
T ss_pred CCeEEEEECCCCCCCEEEE--EeCCC-cEEEEEeecCC
Confidence 24555666666 767776 43667 59999998873
No 86
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=86.38 E-value=13 Score=30.88 Aligned_cols=187 Identities=8% Similarity=0.010 Sum_probs=94.7
Q ss_pred eeeCceEEEeecCCCCceEEEEcCCcccEEecCCCCCCCceeEEEEecCCCCCCcEEEE---------EEcCCCceeEec
Q 018497 99 GSCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVV---------YSLRSNSWKNIA 169 (355)
Q Consensus 99 ~s~~GLl~l~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykvv---------yss~t~~W~~~~ 169 (355)
+..+|.|...+. ...++.++++.++....+-... .....++.+|+. .+...+. ++.....-+.+.
T Consensus 44 d~~~~~ly~~d~--~~~~I~~~~~~g~~~~~~~~~~-~~~p~~ia~d~~---~~~lyv~d~~~~~I~~~~~~g~~~~~~~ 117 (267)
T 1npe_A 44 DCVDKVVYWTDI--SEPSIGRASLHGGEPTTIIRQD-LGSPEGIALDHL---GRTIFWTDSQLDRIEVAKMDGTQRRVLF 117 (267)
T ss_dssp ETTTTEEEEEET--TTTEEEEEESSSCCCEEEECTT-CCCEEEEEEETT---TTEEEEEETTTTEEEEEETTSCSCEEEE
T ss_pred ecCCCEEEEEEC--CCCEEEEEecCCCCcEEEEECC-CCCccEEEEEec---CCeEEEEECCCCEEEEEEcCCCCEEEEE
Confidence 334677777764 5678899998876544332111 112256777765 3332222 555433222221
Q ss_pred cCCCceeeeccccccceeEe---CceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEe-cCCCCCCCCCCceEEEEE--C
Q 018497 170 YGFPRSIEINRSHINSSVFL---NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTV-MMPYDLSTDDADKYLNVF--D 243 (355)
Q Consensus 170 ~~~p~~~~~~~~~~~~~v~~---~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i-~lP~~~~~~~~~~~L~~~--~ 243 (355)
... . .... ++.+ +|.+||..... ....|..++++....+.+ ..+ . .....++.. +
T Consensus 118 -~~~--~--~~P~---~i~vd~~~g~lyv~~~~~------~~~~I~~~~~dg~~~~~~~~~~---~--~~P~gia~d~~~ 178 (267)
T 1npe_A 118 -DTG--L--VNPR---GIVTDPVRGNLYWTDWNR------DNPKIETSHMDGTNRRILAQDN---L--GLPNGLTFDAFS 178 (267)
T ss_dssp -CSS--C--SSEE---EEEEETTTTEEEEEECCS------SSCEEEEEETTSCCCEEEECTT---C--SCEEEEEEETTT
T ss_pred -ECC--C--CCcc---EEEEeeCCCEEEEEECCC------CCcEEEEEecCCCCcEEEEECC---C--CCCcEEEEcCCC
Confidence 111 0 1111 4443 68999987541 125788999876554444 222 1 112234433 4
Q ss_pred CeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEeEEEee-CCcEEEEEEeeCCceEEEEEeCCCCeE-
Q 018497 244 GYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTE-RGKIFIRGECRHGGYGLLVYNPHSDTF- 321 (355)
Q Consensus 244 G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~-~g~i~~~~~~~~~~~~l~~yd~~t~~~- 321 (355)
++|+++....+ .+. +++-.+ . .....+... ..|.++.. ++.+|+. ....+ .+..+|+++++.
T Consensus 179 ~~lyv~d~~~~----~I~--~~~~~g--~--~~~~~~~~~---~~P~gi~~d~~~lyva--~~~~~-~v~~~d~~~g~~~ 242 (267)
T 1npe_A 179 SQLCWVDAGTH----RAE--CLNPAQ--P--GRRKVLEGL---QYPFAVTSYGKNLYYT--DWKTN-SVIAMDLAISKEM 242 (267)
T ss_dssp TEEEEEETTTT----EEE--EEETTE--E--EEEEEEECC---CSEEEEEEETTEEEEE--ETTTT-EEEEEETTTTEEE
T ss_pred CEEEEEECCCC----EEE--EEecCC--C--ceEEEecCC---CCceEEEEeCCEEEEE--ECCCC-eEEEEeCCCCCce
Confidence 68888776543 444 444321 1 111122211 23444433 4578877 52334 599999998775
Q ss_pred EEEEE
Q 018497 322 KCIGV 326 (355)
Q Consensus 322 ~~v~~ 326 (355)
+.+..
T Consensus 243 ~~i~~ 247 (267)
T 1npe_A 243 DTFHP 247 (267)
T ss_dssp EEECC
T ss_pred EEEcc
Confidence 44543
No 87
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=85.27 E-value=21 Score=32.20 Aligned_cols=195 Identities=12% Similarity=0.043 Sum_probs=99.1
Q ss_pred EEEeeeCceEEEeecCCCCceEEEEcCCcccEEecCCCCCCCceeEEEEecCCCCCCc---------EEEE-EEcCCCc-
Q 018497 96 DVVGSCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDD---------FKVV-YSLRSNS- 164 (355)
Q Consensus 96 ~~~~s~~GLl~l~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~g~d~~~~~~~~---------ykvv-yss~t~~- 164 (355)
.+.-..+|-|.+.+. ...++.++|+.+++...+....... . +.+++. .+. -+|. ++..++.
T Consensus 135 ~la~d~~g~lyv~d~--~~~~I~~id~~~g~~~~~~~~~~~~--~-ia~~~~---g~~l~~~d~~~~~~I~~~d~~~~~~ 206 (409)
T 3hrp_A 135 GIAAVGNNTVLAYQR--DDPRVRLISVDDNKVTTVHPGFKGG--K-PAVTKD---KQRVYSIGWEGTHTVYVYMKASGWA 206 (409)
T ss_dssp EEEECSTTEEEEEET--TTTEEEEEETTTTEEEEEEETCCBC--B-CEECTT---SSEEEEEBSSTTCEEEEEEGGGTTC
T ss_pred EEEEeCCCCEEEEec--CCCcEEEEECCCCEEEEeeccCCCC--c-eeEecC---CCcEEEEecCCCceEEEEEcCCCce
Confidence 444446777777763 5678999999998877664432211 1 333433 211 1333 5554331
Q ss_pred eeEeccCCCc-eeeeccccccceeEe---CceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEe-cCCCCCCCCCCc-e-
Q 018497 165 WKNIAYGFPR-SIEINRSHINSSVFL---NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTV-MMPYDLSTDDAD-K- 237 (355)
Q Consensus 165 W~~~~~~~p~-~~~~~~~~~~~~v~~---~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i-~lP~~~~~~~~~-~- 237 (355)
.+.+. .... .. .... ++.+ +|.||+... . ..|..+|+.+.....+ ..+ ........ .
T Consensus 207 ~~~~g-~~~~~~~--~~p~---~iav~p~~g~lyv~d~-~--------~~I~~~d~~~~~~~~~~~~~-~~g~~~~~P~~ 270 (409)
T 3hrp_A 207 PTRIG-QLGSTFS--GKIG---AVALDETEEWLYFVDS-N--------KNFGRFNVKTQEVTLIKQLE-LSGSLGTNPGP 270 (409)
T ss_dssp EEEEE-ECCTTSC--SCCC---BCEECTTSSEEEEECT-T--------CEEEEEETTTCCEEEEEECC-CCSCCCCSSCC
T ss_pred eEEee-eccchhc--CCcE---EEEEeCCCCeEEEEEC-C--------CcEEEEECCCCCEEEEeccc-ccCCCCCCccc
Confidence 22331 1111 11 1111 3332 789999432 2 4899999998776655 222 11111122 2
Q ss_pred EEEEE--CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEec-C----------CCc-eeEeEEEeeCCcEEEEEE
Q 018497 238 YLNVF--DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIE-K----------PQR-IWWPLGFTERGKIFIRGE 303 (355)
Q Consensus 238 ~L~~~--~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~-~----------~~~-~~~~~~~~~~g~i~~~~~ 303 (355)
.++.. +|.|++..... .. |++++..+ .-.....-. . ..+ ...-+++..+|.||+.
T Consensus 271 ~ia~~p~~g~lyv~d~~~----~~--I~~~~~~g---~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyva-- 339 (409)
T 3hrp_A 271 YLIYYFVDSNFYMSDQNL----SS--VYKITPDG---ECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIV-- 339 (409)
T ss_dssp EEEEETTTTEEEEEETTT----TE--EEEECTTC---CEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEE--
T ss_pred cEEEeCCCCEEEEEeCCC----CE--EEEEecCC---CEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEE--
Confidence 45554 58888876543 24 44444322 111111100 0 001 1233556677899988
Q ss_pred eeCCceEEEEEeCCCCeEEEEE
Q 018497 304 CRHGGYGLLVYNPHSDTFKCIG 325 (355)
Q Consensus 304 ~~~~~~~l~~yd~~t~~~~~v~ 325 (355)
.......+..+|+.++++..+.
T Consensus 340 d~~~~~~I~~~~~~~G~v~~~~ 361 (409)
T 3hrp_A 340 DGFKGYCLRKLDILDGYVSTVA 361 (409)
T ss_dssp ETTTTCEEEEEETTTTEEEEEE
T ss_pred eCCCCCEEEEEECCCCEEEEEe
Confidence 6303336999998888877664
No 88
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=85.04 E-value=1.7 Score=38.43 Aligned_cols=137 Identities=9% Similarity=0.090 Sum_probs=64.7
Q ss_pred EEcCCCceeEeccCCCceeeeccccccceeEeCceEEEEEeeeccCCCCCCcEEEEEEcCCce-eeEe-cCCCCCCCCCC
Q 018497 158 YSLRSNSWKNIAYGFPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEI-FQTV-MMPYDLSTDDA 235 (355)
Q Consensus 158 yss~t~~W~~~~~~~p~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~-~~~i-~lP~~~~~~~~ 235 (355)
|+..++.|+.+. .+.........- ...-+|.+...+..+ ..|..+|+.++. +..+ .+. .... .
T Consensus 38 w~~~~~~~~~~~-~~~~h~~~v~~~---~~s~~~~~l~s~s~d--------~~v~vwd~~~~~~~~~~~~~~-~~~~--~ 102 (377)
T 3dwl_C 38 YEQDGNGWKHAR-TFSDHDKIVTCV---DWAPKSNRIVTCSQD--------RNAYVYEKRPDGTWKQTLVLL-RLNR--A 102 (377)
T ss_dssp EEEETTEEEECC-CBCCCSSCEEEE---EECTTTCCEEEEETT--------SSEEEC------CCCCEEECC-CCSS--C
T ss_pred EEccCCceEEEE-EEecCCceEEEE---EEeCCCCEEEEEeCC--------CeEEEEEcCCCCceeeeeEec-ccCC--c
Confidence 777777777665 332111100000 111245444333322 468889988776 3332 222 2111 1
Q ss_pred ceEEEEE-CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecC-CCceeEeEEEeeCCcEEEEEEeeCCceEEEE
Q 018497 236 DKYLNVF-DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEK-PQRIWWPLGFTERGKIFIRGECRHGGYGLLV 313 (355)
Q Consensus 236 ~~~L~~~-~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~-~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~ 313 (355)
...+.-. +|++.++...+ ..+.+|.++.. ..|.....+.. .......+.+..+|..++. ...++ .+..
T Consensus 103 v~~~~~~~~~~~l~~~~~d----~~i~iwd~~~~---~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~--~~~d~-~i~i 172 (377)
T 3dwl_C 103 ATFVRWSPNEDKFAVGSGA----RVISVCYFEQE---NDWWVSKHLKRPLRSTILSLDWHPNNVLLAA--GCADR-KAYV 172 (377)
T ss_dssp EEEEECCTTSSCCEEEESS----SCEEECCC--------CCCCEEECSSCCSCEEEEEECTTSSEEEE--EESSS-CEEE
T ss_pred eEEEEECCCCCEEEEEecC----CeEEEEEECCc---ccceeeeEeecccCCCeEEEEEcCCCCEEEE--EeCCC-EEEE
Confidence 1222222 46666666655 48999998762 34665556654 2223555666777776666 43566 4999
Q ss_pred EeCCCC
Q 018497 314 YNPHSD 319 (355)
Q Consensus 314 yd~~t~ 319 (355)
||++++
T Consensus 173 wd~~~~ 178 (377)
T 3dwl_C 173 LSAYVR 178 (377)
T ss_dssp EEECCS
T ss_pred EEEEec
Confidence 998643
No 89
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=85.03 E-value=15 Score=30.27 Aligned_cols=195 Identities=10% Similarity=0.025 Sum_probs=93.1
Q ss_pred EEeeeCceEEEeecCCCCceEEEEcCCc-ccEEecCCCCCCCce-----------eEEEEecCCCCCCcEEEE-EEcCCC
Q 018497 97 VVGSCNGVLCFCSNGSDRSLIYLWNPLI-KKYMTLPRPSLNPRY-----------LGFGVNSVSGHLDDFKVV-YSLRSN 163 (355)
Q Consensus 97 ~~~s~~GLl~l~~~~~~~~~~~V~NP~T-~~~~~LP~~~~~~~~-----------~~~g~d~~~~~~~~ykvv-yss~t~ 163 (355)
+.-+-+|-.++.. ....++++|..+ ++...+......... +.++.... .+..+|. ++..++
T Consensus 47 ~~~spdg~~l~~~---~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~---~~~~~l~~~~~~~~ 120 (297)
T 2ojh_A 47 PNWSPDGKYLLLN---SEGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVE---FGKSAIYLLPSTGG 120 (297)
T ss_dssp EEECTTSSEEEEE---ETTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTT---TSSCEEEEEETTCC
T ss_pred eEECCCCCEEEEE---cCCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCC---CCcceEEEEECCCC
Confidence 3344456544444 256899999999 888777644321111 22222111 2233443 555555
Q ss_pred ceeEeccCCCceeeeccccccceeEeCce-EEEEEeeeccCCCCCCcEEEEEEcCCceeeEecCCCCCCCCCCceEEEE-
Q 018497 164 SWKNIAYGFPRSIEINRSHINSSVFLNGS-VHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNV- 241 (355)
Q Consensus 164 ~W~~~~~~~p~~~~~~~~~~~~~v~~~G~-lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i~lP~~~~~~~~~~~L~~- 241 (355)
.-+.+. ........ ...-+|. +++..... ....|..+|..+.....+.-. .. ....+.-
T Consensus 121 ~~~~~~-~~~~~~~~-------~~spdg~~l~~~~~~~------~~~~l~~~~~~~~~~~~~~~~-~~----~~~~~~~s 181 (297)
T 2ojh_A 121 TPRLMT-KNLPSYWH-------GWSPDGKSFTYCGIRD------QVFDIYSMDIDSGVETRLTHG-EG----RNDGPDYS 181 (297)
T ss_dssp CCEECC-SSSSEEEE-------EECTTSSEEEEEEEET------TEEEEEEEETTTCCEEECCCS-SS----CEEEEEEC
T ss_pred ceEEee-cCCCccce-------EECCCCCEEEEEECCC------CceEEEEEECCCCcceEcccC-CC----ccccceEC
Confidence 544443 11110000 1222554 34333332 123566677776666554221 11 1122222
Q ss_pred ECCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEeEEEeeCCcEEEEEEeeCC---------ceEEE
Q 018497 242 FDGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHG---------GYGLL 312 (355)
Q Consensus 242 ~~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~---------~~~l~ 312 (355)
-+|+..++..... ....||.++..+ .. ...+.........+.+..+|+.++.. ...+ ...++
T Consensus 182 ~dg~~l~~~~~~~---~~~~i~~~~~~~--~~---~~~~~~~~~~~~~~~~s~dg~~l~~~-~~~~~~~~~~~~~~~~l~ 252 (297)
T 2ojh_A 182 PDGRWIYFNSSRT---GQMQIWRVRVDG--SS---VERITDSAYGDWFPHPSPSGDKVVFV-SYDADVFDHPRDLDVRVQ 252 (297)
T ss_dssp TTSSEEEEEECTT---SSCEEEEEETTS--SC---EEECCCCSEEEEEEEECTTSSEEEEE-EEETTCCSCCSSEEEEEE
T ss_pred CCCCEEEEEecCC---CCccEEEECCCC--CC---cEEEecCCcccCCeEECCCCCEEEEE-EcCCCCCcccccCceEEE
Confidence 2466544444333 478899987422 11 22232222223445666777544431 2111 12599
Q ss_pred EEeCCCCeEEEEE
Q 018497 313 VYNPHSDTFKCIG 325 (355)
Q Consensus 313 ~yd~~t~~~~~v~ 325 (355)
.+|+++++.+.+.
T Consensus 253 ~~d~~~~~~~~~~ 265 (297)
T 2ojh_A 253 LMDMDGGNVETLF 265 (297)
T ss_dssp EEETTSCSCEEEE
T ss_pred EEecCCCCceeee
Confidence 9999998876653
No 90
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=84.83 E-value=17 Score=30.85 Aligned_cols=93 Identities=11% Similarity=0.064 Sum_probs=50.3
Q ss_pred cEEEEEEcCCceeeE-ecCCCCCCCCCCceEEEEECCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCC----
Q 018497 209 WLIVSFDFAKEIFQT-VMMPYDLSTDDADKYLNVFDGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKP---- 283 (355)
Q Consensus 209 ~~Il~fD~~~~~~~~-i~lP~~~~~~~~~~~L~~~~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~---- 283 (355)
..|..+|+.+.+-.. +... . ....+.-..+...++...+ ..+.||.++.. .....+...
T Consensus 237 g~i~iwd~~~~~~~~~~~~~-~-----~v~~~~~~~~~~~~~~~~d----~~i~iwd~~~~------~~~~~~~~~~~~~ 300 (340)
T 4aow_A 237 GQAMLWDLNEGKHLYTLDGG-D-----IINALCFSPNRYWLCAATG----PSIKIWDLEGK------IIVDELKQEVIST 300 (340)
T ss_dssp CEEEEEETTTTEEEEEEECS-S-----CEEEEEECSSSSEEEEEET----TEEEEEETTTT------EEEEEECCC----
T ss_pred CeEEEEEeccCceeeeecCC-c-----eEEeeecCCCCceeeccCC----CEEEEEECCCC------eEEEeccccceee
Confidence 578889988765432 2222 1 1123333344444444444 48899987641 111111111
Q ss_pred -----CceeEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCe
Q 018497 284 -----QRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDT 320 (355)
Q Consensus 284 -----~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~ 320 (355)
......+++..+|+.++. ...++ .+.+||++|++
T Consensus 301 ~~~~h~~~v~~l~~s~dg~~l~s--gs~Dg-~v~iW~~~tGt 339 (340)
T 4aow_A 301 SSKAEPPQCTSLAWSADGQTLFA--GYTDN-LVRVWQVTIGT 339 (340)
T ss_dssp ---CCCCCEEEEEECTTSSEEEE--EETTS-CEEEEEEEC--
T ss_pred eccCCCCCEEEEEECCCCCEEEE--EeCCC-EEEEEeCCCcC
Confidence 113445667778887777 43677 49999999875
No 91
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=84.73 E-value=17 Score=30.78 Aligned_cols=106 Identities=14% Similarity=0.074 Sum_probs=58.8
Q ss_pred CceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEecCCCCCCCCCCceEEEEE-CCeEEEEEecCCCCccEEEEEEeccC
Q 018497 190 NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF-DGYLCVFATIPNNTFRSYELWVMKEY 268 (355)
Q Consensus 190 ~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i~lP~~~~~~~~~~~L~~~-~G~L~~v~~~~~~~~~~l~iW~l~~~ 268 (355)
+|.+||..... ..|..||+.+.+...+..| ... ..++.. +|+|++.. . ..+.+|..+.
T Consensus 24 ~~~l~~~d~~~--------~~i~~~d~~~~~~~~~~~~-~~~-----~~i~~~~dG~l~v~~--~----~~l~~~d~~~- 82 (297)
T 3g4e_A 24 SNSLLFVDIPA--------KKVCRWDSFTKQVQRVTMD-APV-----SSVALRQSGGYVATI--G----TKFCALNWKE- 82 (297)
T ss_dssp TTEEEEEETTT--------TEEEEEETTTCCEEEEECS-SCE-----EEEEEBTTSSEEEEE--T----TEEEEEETTT-
T ss_pred CCEEEEEECCC--------CEEEEEECCCCcEEEEeCC-Cce-----EEEEECCCCCEEEEE--C----CeEEEEECCC-
Confidence 58999987654 6899999999887776665 322 234433 47765543 2 3554444332
Q ss_pred CCCCCeEEEEEecCC-Cc-eeEeEEEeeCCcEEEEEEee--------CCceEEEEEeCCCC
Q 018497 269 GLTESWTKLYTIEKP-QR-IWWPLGFTERGKIFIRGECR--------HGGYGLLVYNPHSD 319 (355)
Q Consensus 269 ~~~~~W~~~~~i~~~-~~-~~~~~~~~~~g~i~~~~~~~--------~~~~~l~~yd~~t~ 319 (355)
..+......... .. ...-+.+..+|.+++..... .....++.+|...+
T Consensus 83 ---g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~ 140 (297)
T 3g4e_A 83 ---QSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHH 140 (297)
T ss_dssp ---TEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSC
T ss_pred ---CcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCC
Confidence 334444433211 11 22335556678887762110 01125888888643
No 92
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=84.50 E-value=13 Score=33.57 Aligned_cols=110 Identities=11% Similarity=0.038 Sum_probs=62.6
Q ss_pred eCceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEecCCCCCCCCCCceEEEEE-CCe-EEEEEecCCCCccEEEEEEec
Q 018497 189 LNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF-DGY-LCVFATIPNNTFRSYELWVMK 266 (355)
Q Consensus 189 ~~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i~lP~~~~~~~~~~~L~~~-~G~-L~~v~~~~~~~~~~l~iW~l~ 266 (355)
-+|.|||..... ..|..+|+.+.+...+... ... .. ++.. +|+ |++...... . .||.++
T Consensus 140 ~~g~lyv~d~~~--------~~I~~id~~~g~~~~~~~~-~~~---~~--ia~~~~g~~l~~~d~~~~---~--~I~~~d 200 (409)
T 3hrp_A 140 GNNTVLAYQRDD--------PRVRLISVDDNKVTTVHPG-FKG---GK--PAVTKDKQRVYSIGWEGT---H--TVYVYM 200 (409)
T ss_dssp STTEEEEEETTT--------TEEEEEETTTTEEEEEEET-CCB---CB--CEECTTSSEEEEEBSSTT---C--EEEEEE
T ss_pred CCCCEEEEecCC--------CcEEEEECCCCEEEEeecc-CCC---Cc--eeEecCCCcEEEEecCCC---c--eEEEEE
Confidence 478999987654 5899999998888766322 111 11 2322 244 444433222 1 567776
Q ss_pred cCCCCCCeE--EEEEecC-CCceeEeEEEee-CCcEEEEEEeeCCceEEEEEeCCCCeEEEE
Q 018497 267 EYGLTESWT--KLYTIEK-PQRIWWPLGFTE-RGKIFIRGECRHGGYGLLVYNPHSDTFKCI 324 (355)
Q Consensus 267 ~~~~~~~W~--~~~~i~~-~~~~~~~~~~~~-~g~i~~~~~~~~~~~~l~~yd~~t~~~~~v 324 (355)
.. ..|. ....+.. ......-+++.. +|.||+. . .++ .++.||++++....+
T Consensus 201 ~~---~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~--d-~~~-~I~~~d~~~~~~~~~ 255 (409)
T 3hrp_A 201 KA---SGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFV--D-SNK-NFGRFNVKTQEVTLI 255 (409)
T ss_dssp GG---GTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEE--C-TTC-EEEEEETTTCCEEEE
T ss_pred cC---CCceeEEeeeccchhcCCcEEEEEeCCCCeEEEE--E-CCC-cEEEEECCCCCEEEE
Confidence 53 2343 2212222 111233466666 6788887 5 455 599999998876555
No 93
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=84.11 E-value=19 Score=30.74 Aligned_cols=189 Identities=11% Similarity=0.043 Sum_probs=92.4
Q ss_pred eeCceEEEeecCCCCceEEEEcCCcccEEecCCCCCCCceeEEEEecCCCCCC---------cEEEE-EEcCCCceeEec
Q 018497 100 SCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLD---------DFKVV-YSLRSNSWKNIA 169 (355)
Q Consensus 100 s~~GLl~l~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~g~d~~~~~~~---------~ykvv-yss~t~~W~~~~ 169 (355)
..+|-|.+.+. ...+++.+||.++....++... ...++.+++. .+ ..+|+ |+..+++.+.+.
T Consensus 40 ~~~g~lyv~d~--~~~~I~~~d~~g~~~~~~~~~~---~p~gia~~~d---G~l~vad~~~~~~~v~~~d~~~g~~~~~~ 111 (306)
T 2p4o_A 40 APDGTIFVTNH--EVGEIVSITPDGNQQIHATVEG---KVSGLAFTSN---GDLVATGWNADSIPVVSLVKSDGTVETLL 111 (306)
T ss_dssp CTTSCEEEEET--TTTEEEEECTTCCEEEEEECSS---EEEEEEECTT---SCEEEEEECTTSCEEEEEECTTSCEEEEE
T ss_pred CCCCCEEEEeC--CCCeEEEECCCCceEEEEeCCC---CceeEEEcCC---CcEEEEeccCCcceEEEEcCCCCeEEEEE
Confidence 34677766653 4678899999876544333221 1245555543 22 12333 666777766554
Q ss_pred cCCCceeeeccccccceeEeCceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEe---c-----CCCCCCCCCCceEEEE
Q 018497 170 YGFPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTV---M-----MPYDLSTDDADKYLNV 241 (355)
Q Consensus 170 ~~~p~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i---~-----lP~~~~~~~~~~~L~~ 241 (355)
..+..... ... .+.-+|.+|..... ...|..+|..+.+.+.. . .+.... ...-.+..
T Consensus 112 -~~~~~~~~-~g~---~~~~~~~~~v~d~~--------~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~--~~pngis~ 176 (306)
T 2p4o_A 112 -TLPDAIFL-NGI---TPLSDTQYLTADSY--------RGAIWLIDVVQPSGSIWLEHPMLARSNSESVF--PAANGLKR 176 (306)
T ss_dssp -ECTTCSCE-EEE---EESSSSEEEEEETT--------TTEEEEEETTTTEEEEEEECGGGSCSSTTCCS--CSEEEEEE
T ss_pred -eCCCcccc-Ccc---cccCCCcEEEEECC--------CCeEEEEeCCCCcEeEEEECCccccccccCCC--CcCCCcCc
Confidence 33221110 100 12334556665432 25899999886533221 1 110111 01122433
Q ss_pred ECCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeE
Q 018497 242 FDGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTF 321 (355)
Q Consensus 242 ~~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~~ 321 (355)
-++.|++..... ..+.++.++..+.-........... ..-+++..+|.+|+. ....+ .+..||++. +.
T Consensus 177 dg~~lyv~d~~~----~~I~~~~~~~~g~~~~~~~~~~~~~----P~gi~vd~dG~l~va--~~~~~-~V~~~~~~G-~~ 244 (306)
T 2p4o_A 177 FGNFLYVSNTEK----MLLLRIPVDSTDKPGEPEIFVEQTN----IDDFAFDVEGNLYGA--THIYN-SVVRIAPDR-ST 244 (306)
T ss_dssp ETTEEEEEETTT----TEEEEEEBCTTSCBCCCEEEEESCC----CSSEEEBTTCCEEEE--CBTTC-CEEEECTTC-CE
T ss_pred CCCEEEEEeCCC----CEEEEEEeCCCCCCCccEEEeccCC----CCCeEECCCCCEEEE--eCCCC-eEEEECCCC-CE
Confidence 345788777654 3555555443111011122222211 223667778889888 52344 599999974 44
Q ss_pred EE
Q 018497 322 KC 323 (355)
Q Consensus 322 ~~ 323 (355)
..
T Consensus 245 ~~ 246 (306)
T 2p4o_A 245 TI 246 (306)
T ss_dssp EE
T ss_pred EE
Confidence 33
No 94
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=83.90 E-value=18 Score=30.43 Aligned_cols=189 Identities=11% Similarity=0.006 Sum_probs=90.7
Q ss_pred CCceEEEEcCCcccEEecCCCC---CCCceeEEEEecCCCCCCcEE-------EE-EEcCCCceeEe-ccCCCceeeecc
Q 018497 113 DRSLIYLWNPLIKKYMTLPRPS---LNPRYLGFGVNSVSGHLDDFK-------VV-YSLRSNSWKNI-AYGFPRSIEINR 180 (355)
Q Consensus 113 ~~~~~~V~NP~T~~~~~LP~~~---~~~~~~~~g~d~~~~~~~~yk-------vv-yss~t~~W~~~-~~~~p~~~~~~~ 180 (355)
....++++||.+++...+..+. ......++.+++. .+..- |. |+.. ++.+.+ . ..........
T Consensus 44 ~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~---~g~l~v~~~~~~l~~~d~~-g~~~~~~~-~~~~~~~~~~ 118 (314)
T 1pjx_A 44 PAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRD---ANQLFVADMRLGLLVVQTD-GTFEEIAK-KDSEGRRMQG 118 (314)
T ss_dssp ECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSS---SSEEEEEETTTEEEEEETT-SCEEECCS-BCTTSCBCBC
T ss_pred CCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecC---CCcEEEEECCCCEEEEeCC-CCEEEEEe-ccCCCccccC
Confidence 3567999999998887654311 0011255666653 23322 22 7776 665544 3 1111111111
Q ss_pred ccccceeEe--CceEEEEEeeecc-------CCCCCCcEEEEEEcCCceeeEecCCCCCCCCCCceEEEEE-----CC-e
Q 018497 181 SHINSSVFL--NGSVHWCARFSCY-------HDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF-----DG-Y 245 (355)
Q Consensus 181 ~~~~~~v~~--~G~lyw~~~~~~~-------~~~~~~~~Il~fD~~~~~~~~i~lP~~~~~~~~~~~L~~~-----~G-~ 245 (355)
.. .+.+ +|.+|+....... ........|..+|.. ++...+.-. .. ....++.. +| .
T Consensus 119 ~~---~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~-~~----~~~~i~~~~~~d~dg~~ 189 (314)
T 1pjx_A 119 CN---DCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTA-FQ----FPNGIAVRHMNDGRPYQ 189 (314)
T ss_dssp CC---EEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEE-ES----SEEEEEEEECTTSCEEE
T ss_pred Cc---CEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccC-CC----CcceEEEecccCCCCCE
Confidence 11 3433 6877765542100 000112479999987 555443111 00 11123333 45 4
Q ss_pred EEEEEecCCCCccEEEEEEeccCCCCCCeEEE---EEecCCC-ceeEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCe-
Q 018497 246 LCVFATIPNNTFRSYELWVMKEYGLTESWTKL---YTIEKPQ-RIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDT- 320 (355)
Q Consensus 246 L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~---~~i~~~~-~~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~- 320 (355)
|++..... ..+.+|.++.. ...... ..++... ....-+++..+|.+++. ...++ .+..||+++++
T Consensus 190 l~v~~~~~----~~i~~~~~~~~---g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~--~~~~~-~i~~~d~~~g~~ 259 (314)
T 1pjx_A 190 LIVAETPT----KKLWSYDIKGP---AKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVA--NWGSS-HIEVFGPDGGQP 259 (314)
T ss_dssp EEEEETTT----TEEEEEEEEET---TEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEE--EETTT-EEEEECTTCBSC
T ss_pred EEEEECCC----CeEEEEECCCC---CccccceEEEECCCCCCCCCCceEECCCCCEEEE--EcCCC-EEEEEcCCCCcE
Confidence 56555433 47777776531 223322 1222111 12233555667888888 52345 49999999554
Q ss_pred EEEEE
Q 018497 321 FKCIG 325 (355)
Q Consensus 321 ~~~v~ 325 (355)
...+.
T Consensus 260 ~~~~~ 264 (314)
T 1pjx_A 260 KMRIR 264 (314)
T ss_dssp SEEEE
T ss_pred eEEEe
Confidence 34443
No 95
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=83.43 E-value=21 Score=30.76 Aligned_cols=68 Identities=9% Similarity=0.092 Sum_probs=43.8
Q ss_pred CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEeEEEeeCCcEEEEEEeeCCceEEEEEeCCC--Ce
Q 018497 243 DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHS--DT 320 (355)
Q Consensus 243 ~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t--~~ 320 (355)
+|.+.++...+ ..+.+|.++.. ..+..+.........+.+..+|.++.. . .++. +..||+.+ ++
T Consensus 213 ~~~~l~~~~~d----~~i~i~d~~~~------~~~~~~~~~~~~v~~~~~~~~~~~l~~--~-~d~~-i~i~~~~~~~~~ 278 (372)
T 1k8k_C 213 NGSRVAWVSHD----STVCLADADKK------MAVATLASETLPLLAVTFITESSLVAA--G-HDCF-PVLFTYDSAAGK 278 (372)
T ss_dssp SSSEEEEEETT----TEEEEEEGGGT------TEEEEEECSSCCEEEEEEEETTEEEEE--E-TTSS-CEEEEEETTTTE
T ss_pred CCCEEEEEeCC----CEEEEEECCCC------ceeEEEccCCCCeEEEEEecCCCEEEE--E-eCCe-EEEEEccCcCce
Confidence 46665555555 48999998752 233333332222455667778888777 6 6664 99999988 87
Q ss_pred EEEE
Q 018497 321 FKCI 324 (355)
Q Consensus 321 ~~~v 324 (355)
|..+
T Consensus 279 ~~~~ 282 (372)
T 1k8k_C 279 LSFG 282 (372)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 7554
No 96
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=83.32 E-value=19 Score=30.05 Aligned_cols=184 Identities=9% Similarity=0.129 Sum_probs=94.1
Q ss_pred eeCceEEEeecCCCCceEEEEcCCcccEEecCCCCCCCceeEEEEecCCCCCCcE-------EEE-EEcCCCceeEeccC
Q 018497 100 SCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDF-------KVV-YSLRSNSWKNIAYG 171 (355)
Q Consensus 100 s~~GLl~l~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~g~d~~~~~~~~y-------kvv-yss~t~~W~~~~~~ 171 (355)
..+|.+.+... .....+.++|+..+....+..... ....++.+|+. .+-| +|. |+.....-+.+. .
T Consensus 86 ~~~g~l~v~~~-~~~~~i~~~d~~g~~~~~~~~~~~-~~~~~i~~~~~---g~l~v~~~~~~~i~~~~~~g~~~~~~~-~ 159 (286)
T 1q7f_A 86 RNSGDIIVTER-SPTHQIQIYNQYGQFVRKFGATIL-QHPRGVTVDNK---GRIIVVECKVMRVIIFDQNGNVLHKFG-C 159 (286)
T ss_dssp TTTTEEEEEEC-GGGCEEEEECTTSCEEEEECTTTC-SCEEEEEECTT---SCEEEEETTTTEEEEECTTSCEEEEEE-C
T ss_pred cCCCeEEEEcC-CCCCEEEEECCCCcEEEEecCccC-CCceEEEEeCC---CCEEEEECCCCEEEEEcCCCCEEEEeC-C
Confidence 35777766652 025688999965554444543211 12256666664 3211 111 554433333332 1
Q ss_pred CCceeeeccccccceeEe--CceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEecCCCCCCCCCCceEEEEE-CCeEEE
Q 018497 172 FPRSIEINRSHINSSVFL--NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF-DGYLCV 248 (355)
Q Consensus 172 ~p~~~~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i~lP~~~~~~~~~~~L~~~-~G~L~~ 248 (355)
... . .... ++.+ +|.+|...... ..|..||...+....+..+ .... ....++.. +|+|++
T Consensus 160 ~~~-~--~~p~---~i~~~~~g~l~v~~~~~--------~~i~~~~~~g~~~~~~~~~-g~~~--~p~~i~~d~~G~l~v 222 (286)
T 1q7f_A 160 SKH-L--EFPN---GVVVNDKQEIFISDNRA--------HCVKVFNYEGQYLRQIGGE-GITN--YPIGVGINSNGEILI 222 (286)
T ss_dssp TTT-C--SSEE---EEEECSSSEEEEEEGGG--------TEEEEEETTCCEEEEESCT-TTSC--SEEEEEECTTCCEEE
T ss_pred CCc-c--CCcE---EEEECCCCCEEEEECCC--------CEEEEEcCCCCEEEEEccC-CccC--CCcEEEECCCCCEEE
Confidence 100 0 0011 3443 58877765443 5899999987766666433 2211 22334443 588888
Q ss_pred EEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEeEEEeeCCcEEEEEEeeCCceEEEEEeCCC
Q 018497 249 FATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHS 318 (355)
Q Consensus 249 v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t 318 (355)
+....+ ..+.+|..+ ..-..............-+++..+|.+|+. . .++ .+.+|+...
T Consensus 223 ~~~~~~---~~i~~~~~~-----g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs--~-~~~-~v~v~~~~~ 280 (286)
T 1q7f_A 223 ADNHNN---FNLTIFTQD-----GQLISALESKVKHAQCFDVALMDDGSVVLA--S-KDY-RLYIYRYVQ 280 (286)
T ss_dssp EECSSS---CEEEEECTT-----SCEEEEEEESSCCSCEEEEEEETTTEEEEE--E-TTT-EEEEEECSC
T ss_pred EeCCCC---EEEEEECCC-----CCEEEEEcccCCCCcceeEEECCCCcEEEE--C-CCC-eEEEEEccc
Confidence 775442 277777532 122222222221112334666778888888 6 555 488887754
No 97
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=83.17 E-value=21 Score=30.59 Aligned_cols=188 Identities=10% Similarity=0.078 Sum_probs=93.9
Q ss_pred CCceEEEEcCCcccEEecCCCCCC------------------CceeEEEEecCCCCCCcEEEE--------EEcCCCcee
Q 018497 113 DRSLIYLWNPLIKKYMTLPRPSLN------------------PRYLGFGVNSVSGHLDDFKVV--------YSLRSNSWK 166 (355)
Q Consensus 113 ~~~~~~V~NP~T~~~~~LP~~~~~------------------~~~~~~g~d~~~~~~~~ykvv--------yss~t~~W~ 166 (355)
...+++.+||.+++...+...... ....++.+++. .+..-|. |+..++..+
T Consensus 38 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~---~g~l~v~d~~~~i~~~d~~~g~~~ 114 (322)
T 2fp8_A 38 QDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQ---NNQLYIVDCYYHLSVVGSEGGHAT 114 (322)
T ss_dssp TTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETT---TTEEEEEETTTEEEEECTTCEECE
T ss_pred CCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCC---CCcEEEEECCCCEEEEeCCCCEEE
Confidence 456788888888766544321100 11266777763 2222221 666666555
Q ss_pred EeccCCCceeeeccccccceeEe---CceEEEEEeeecc-C--------CCCCCcEEEEEEcCCceeeEe----cCCCCC
Q 018497 167 NIAYGFPRSIEINRSHINSSVFL---NGSVHWCARFSCY-H--------DNSCPWLIVSFDFAKEIFQTV----MMPYDL 230 (355)
Q Consensus 167 ~~~~~~p~~~~~~~~~~~~~v~~---~G~lyw~~~~~~~-~--------~~~~~~~Il~fD~~~~~~~~i----~lP~~~ 230 (355)
.+. ............ .+.+ +|.+|+....... . .......|..||..+.+...+ ..| .
T Consensus 115 ~~~-~~~~~~~~~~p~---~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~p-~- 188 (322)
T 2fp8_A 115 QLA-TSVDGVPFKWLY---AVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKELHVP-G- 188 (322)
T ss_dssp EEE-SEETTEECSCEE---EEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEEESCC-C-
T ss_pred Eec-ccCCCCcccccc---eEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccCCccC-c-
Confidence 443 111111111111 3443 6788886543100 0 011235799999988776554 223 1
Q ss_pred CCCCCceEEEEE-CCe-EEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEeEEEeeCCcEEEEEEeeC--
Q 018497 231 STDDADKYLNVF-DGY-LCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRH-- 306 (355)
Q Consensus 231 ~~~~~~~~L~~~-~G~-L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~-- 306 (355)
.++.. +|+ |++..... ..+.++.++... .........++ . ..-+++..+|.|++. ...
T Consensus 189 -------gia~~~dg~~lyv~d~~~----~~I~~~~~~~~~-~~~~~~~~~~~--g--P~gi~~d~~G~l~va--~~~~~ 250 (322)
T 2fp8_A 189 -------GAEVSADSSFVLVAEFLS----HQIVKYWLEGPK-KGTAEVLVKIP--N--PGNIKRNADGHFWVS--SSEEL 250 (322)
T ss_dssp -------EEEECTTSSEEEEEEGGG----TEEEEEESSSTT-TTCEEEEEECS--S--EEEEEECTTSCEEEE--EEEET
T ss_pred -------ceEECCCCCEEEEEeCCC----CeEEEEECCCCc-CCccceEEeCC--C--CCCeEECCCCCEEEE--ecCcc
Confidence 23333 354 77766543 355444444211 12333332221 1 222455567788887 412
Q ss_pred ------C-ceEEEEEeCCCCeEEEEEEe
Q 018497 307 ------G-GYGLLVYNPHSDTFKCIGVH 327 (355)
Q Consensus 307 ------~-~~~l~~yd~~t~~~~~v~~~ 327 (355)
. ...+..||++.+.++.+...
T Consensus 251 ~~~~~~~~~~~v~~~d~~G~~~~~~~~~ 278 (322)
T 2fp8_A 251 DGNMHGRVDPKGIKFDEFGNILEVIPLP 278 (322)
T ss_dssp TSSTTSCEEEEEEEECTTSCEEEEEECC
T ss_pred cccccCCCccEEEEECCCCCEEEEEECC
Confidence 0 12599999988777777654
No 98
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=83.07 E-value=33 Score=32.65 Aligned_cols=193 Identities=10% Similarity=-0.021 Sum_probs=96.4
Q ss_pred CceEEEeecCCCCceEEEEcCCcccEE-ecCCCCCCCceeEEEEecCCCCCCcEEE-------E-EEcCCCceeEeccCC
Q 018497 102 NGVLCFCSNGSDRSLIYLWNPLIKKYM-TLPRPSLNPRYLGFGVNSVSGHLDDFKV-------V-YSLRSNSWKNIAYGF 172 (355)
Q Consensus 102 ~GLl~l~~~~~~~~~~~V~NP~T~~~~-~LP~~~~~~~~~~~g~d~~~~~~~~ykv-------v-yss~t~~W~~~~~~~ 172 (355)
++++.+... ....+.|+|+.|++.. .+|.... ..++.++|. ++...| . ||..+.+-+.+. .+
T Consensus 166 ~~~~~V~~~--~~~~V~viD~~t~~v~~~i~~g~~---p~~v~~SpD---Gr~lyv~~~dg~V~viD~~~~t~~~v~-~i 236 (567)
T 1qks_A 166 ENLFSVTLR--DAGQIALIDGSTYEIKTVLDTGYA---VHISRLSAS---GRYLFVIGRDGKVNMIDLWMKEPTTVA-EI 236 (567)
T ss_dssp GGEEEEEET--TTTEEEEEETTTCCEEEEEECSSC---EEEEEECTT---SCEEEEEETTSEEEEEETTSSSCCEEE-EE
T ss_pred CceEEEEeC--CCCeEEEEECCCCeEEEEEeCCCC---ccceEECCC---CCEEEEEcCCCeEEEEECCCCCCcEeE-EE
Confidence 456655553 6788999999998776 4543321 134555553 222111 1 666422223333 22
Q ss_pred CceeeeccccccceeEe-----CceEEEEEeeeccCCCCCCcEEEEEEcCCcee-eEecCCCCCCCC------C-CceEE
Q 018497 173 PRSIEINRSHINSSVFL-----NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIF-QTVMMPYDLSTD------D-ADKYL 239 (355)
Q Consensus 173 p~~~~~~~~~~~~~v~~-----~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~-~~i~lP~~~~~~------~-~~~~L 239 (355)
+.+..... ..+- +|+.-+++... ...+.++|..+.+- ..|++. ....+ . ....+
T Consensus 237 ~~G~~P~~-----ia~s~~~~pDGk~l~v~n~~-------~~~v~ViD~~t~~~~~~i~~~-~~~~~~~~~~p~~rva~i 303 (567)
T 1qks_A 237 KIGSEARS-----IETSKMEGWEDKYAIAGAYW-------PPQYVIMDGETLEPKKIQSTR-GMTYDEQEYHPEPRVAAI 303 (567)
T ss_dssp ECCSEEEE-----EEECCSTTCTTTEEEEEEEE-------TTEEEEEETTTCCEEEEEECC-EECTTTCCEESCCCEEEE
T ss_pred ecCCCCce-----eEEccccCCCCCEEEEEEcc-------CCeEEEEECCCCcEEEEEecc-ccccccccccCCCceEEE
Confidence 22211110 2233 67544444333 36889999877554 334443 21100 0 11223
Q ss_pred EEEC-CeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEeEEEeeCCcEEEEEEeeCCceEEEEEeCCC
Q 018497 240 NVFD-GYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHS 318 (355)
Q Consensus 240 ~~~~-G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t 318 (355)
..+. +..+++...+. .. ||..+-.. ....++..|+... ....+++..+|+-+++. . ...+++.++|.++
T Consensus 304 ~~s~~~~~~vv~~~~~---g~--v~~vd~~~--~~~~~v~~i~~~~-~~~d~~~~pdgr~~~va-~-~~sn~V~ViD~~t 373 (567)
T 1qks_A 304 LASHYRPEFIVNVKET---GK--ILLVDYTD--LNNLKTTEISAER-FLHDGGLDGSHRYFITA-A-NARNKLVVIDTKE 373 (567)
T ss_dssp EECSSSSEEEEEETTT---TE--EEEEETTC--SSEEEEEEEECCS-SEEEEEECTTSCEEEEE-E-GGGTEEEEEETTT
T ss_pred EEcCCCCEEEEEecCC---Ce--EEEEecCC--Cccceeeeeeccc-cccCceECCCCCEEEEE-e-CCCCeEEEEECCC
Confidence 3333 45555555332 23 45554321 2345556665544 34557778888655551 3 2223699999999
Q ss_pred CeEEE-EEE
Q 018497 319 DTFKC-IGV 326 (355)
Q Consensus 319 ~~~~~-v~~ 326 (355)
+++.. +.+
T Consensus 374 ~kl~~~i~v 382 (567)
T 1qks_A 374 GKLVAIEDT 382 (567)
T ss_dssp TEEEEEEEC
T ss_pred CcEEEEEec
Confidence 98754 454
No 99
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=83.06 E-value=18 Score=29.70 Aligned_cols=182 Identities=12% Similarity=0.020 Sum_probs=94.8
Q ss_pred EEeeeCceEEEeecCCCCceEEEEcCCcccEEecCCCCCCCceeEEEEecCCCCCCcEEEE---------EEcCCCceeE
Q 018497 97 VVGSCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVV---------YSLRSNSWKN 167 (355)
Q Consensus 97 ~~~s~~GLl~l~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykvv---------yss~t~~W~~ 167 (355)
+.-..+|-+.+.. ....++++||.++....++.... ....++.+|+. +. .-|. |+.++.....
T Consensus 72 i~~~~~g~l~v~~---~~~~i~~~d~~~~~~~~~~~~~~-~~p~~i~~~~~---g~-l~v~~~~~~~i~~~~~~~~~~~~ 143 (270)
T 1rwi_B 72 LAVDGAGTVYVTD---FNNRVVTLAAGSNNQTVLPFDGL-NYPEGLAVDTQ---GA-VYVADRGNNRVVKLAAGSKTQTV 143 (270)
T ss_dssp EEECTTCCEEEEE---TTTEEEEECTTCSCCEECCCCSC-SSEEEEEECTT---CC-EEEEEGGGTEEEEECTTCCSCEE
T ss_pred eEECCCCCEEEEc---CCCEEEEEeCCCceEeeeecCCc-CCCcceEECCC---CC-EEEEECCCCEEEEEECCCceeEe
Confidence 3334467666665 25689999998887666643221 12256667764 32 2111 4444333222
Q ss_pred eccCCCceeeeccccccceeEe--CceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEecCCCCCCCCCCceEEEEE-CC
Q 018497 168 IAYGFPRSIEINRSHINSSVFL--NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF-DG 244 (355)
Q Consensus 168 ~~~~~p~~~~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i~lP~~~~~~~~~~~L~~~-~G 244 (355)
.. .. .. .... ++.+ +|.+|+..... ..|..||..+......... .. .....++.. +|
T Consensus 144 ~~-~~--~~--~~p~---~i~~~~~g~l~v~~~~~--------~~i~~~~~~~~~~~~~~~~--~~--~~p~~i~~d~~g 203 (270)
T 1rwi_B 144 LP-FT--GL--NDPD---GVAVDNSGNVYVTDTDN--------NRVVKLEAESNNQVVLPFT--DI--TAPWGIAVDEAG 203 (270)
T ss_dssp CC-CC--SC--CSCC---CEEECTTCCEEEEEGGG--------TEEEEECTTTCCEEECCCS--SC--CSEEEEEECTTC
T ss_pred ec-cc--cC--CCce---eEEEeCCCCEEEEECCC--------CEEEEEecCCCceEeeccc--CC--CCceEEEECCCC
Confidence 11 00 00 0111 3433 58888776543 5899999988765443222 11 122344444 47
Q ss_pred eEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCc-eeEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCe
Q 018497 245 YLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQR-IWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDT 320 (355)
Q Consensus 245 ~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~-~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~ 320 (355)
.|++.....+ .+.+|..+. ..... +..... ....+++..+|.+|+. ...++ .+..|++..++
T Consensus 204 ~l~v~~~~~~----~v~~~~~~~---~~~~~----~~~~~~~~p~~i~~~~~g~l~v~--~~~~~-~v~~~~~~~~~ 266 (270)
T 1rwi_B 204 TVYVTEHNTN----QVVKLLAGS---TTSTV----LPFTGLNTPLAVAVDSDRTVYVA--DRGND-RVVKLTSLEHH 266 (270)
T ss_dssp CEEEEETTTS----CEEEECTTC---SCCEE----CCCCSCSCEEEEEECTTCCEEEE--EGGGT-EEEEECCCGGG
T ss_pred CEEEEECCCC----cEEEEcCCC---Cccee----eccCCCCCceeEEECCCCCEEEE--ECCCC-EEEEEcCCCcc
Confidence 8888775443 555554432 11111 221111 2334556667888888 53445 59999887654
No 100
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=82.75 E-value=19 Score=29.63 Aligned_cols=181 Identities=10% Similarity=0.003 Sum_probs=89.5
Q ss_pred CCceEEEEcCCcccEEecCCCCCCCceeEEEEecCCCCCCcE------EEE-EEcCC-CceeEeccCCCceeeecccccc
Q 018497 113 DRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDF------KVV-YSLRS-NSWKNIAYGFPRSIEINRSHIN 184 (355)
Q Consensus 113 ~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~g~d~~~~~~~~y------kvv-yss~t-~~W~~~~~~~p~~~~~~~~~~~ 184 (355)
....++++|+.+++...+...... ...+.+.|. +..+ +|. ++..+ +..+.+. ........ ...
T Consensus 20 ~~~~i~~~d~~~~~~~~~~~~~~~--v~~~~~spd---g~~l~~~~~~~i~~~d~~~~~~~~~~~-~~~~~~~~-~~~-- 90 (297)
T 2ojh_A 20 MRSSIEIFNIRTRKMRVVWQTPEL--FEAPNWSPD---GKYLLLNSEGLLYRLSLAGDPSPEKVD-TGFATICN-NDH-- 90 (297)
T ss_dssp CCEEEEEEETTTTEEEEEEEESSC--CEEEEECTT---SSEEEEEETTEEEEEESSSCCSCEECC-CTTCCCBC-SCC--
T ss_pred cceeEEEEeCCCCceeeeccCCcc--eEeeEECCC---CCEEEEEcCCeEEEEeCCCCCCceEec-cccccccc-cce--
Confidence 567899999999888766543222 133444443 2211 122 77777 6665444 22110100 100
Q ss_pred ceeEeCceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEecCCCCCCCCCCceEEEEE-CCe-EEEEEecCCCCccEEEE
Q 018497 185 SSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF-DGY-LCVFATIPNNTFRSYEL 262 (355)
Q Consensus 185 ~~v~~~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i~lP~~~~~~~~~~~L~~~-~G~-L~~v~~~~~~~~~~l~i 262 (355)
...-+|......... ......|..+|..+.....+... .. ...+.-. +|+ |++....+ ..+.|
T Consensus 91 -~~spdg~~l~~~~~~----~~~~~~l~~~~~~~~~~~~~~~~-~~-----~~~~~~spdg~~l~~~~~~~----~~~~l 155 (297)
T 2ojh_A 91 -GISPDGALYAISDKV----EFGKSAIYLLPSTGGTPRLMTKN-LP-----SYWHGWSPDGKSFTYCGIRD----QVFDI 155 (297)
T ss_dssp -EECTTSSEEEEEECT----TTSSCEEEEEETTCCCCEECCSS-SS-----EEEEEECTTSSEEEEEEEET----TEEEE
T ss_pred -EECCCCCEEEEEEeC----CCCcceEEEEECCCCceEEeecC-CC-----ccceEECCCCCEEEEEECCC----CceEE
Confidence 223366544444321 12346888899887776555332 21 1122222 455 44444444 47899
Q ss_pred EEeccCCCCCCeEEEEEecCCCceeEeEEEeeCCc-EEEEEEeeCCce-EEEEEeCCCCeEEEE
Q 018497 263 WVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGK-IFIRGECRHGGY-GLLVYNPHSDTFKCI 324 (355)
Q Consensus 263 W~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~-i~~~~~~~~~~~-~l~~yd~~t~~~~~v 324 (355)
|.++... ... ..+.........+.+..+|+ |++. ...++. .++.++..++..+.+
T Consensus 156 ~~~~~~~--~~~---~~~~~~~~~~~~~~~s~dg~~l~~~--~~~~~~~~i~~~~~~~~~~~~~ 212 (297)
T 2ojh_A 156 YSMDIDS--GVE---TRLTHGEGRNDGPDYSPDGRWIYFN--SSRTGQMQIWRVRVDGSSVERI 212 (297)
T ss_dssp EEEETTT--CCE---EECCCSSSCEEEEEECTTSSEEEEE--ECTTSSCEEEEEETTSSCEEEC
T ss_pred EEEECCC--Ccc---eEcccCCCccccceECCCCCEEEEE--ecCCCCccEEEECCCCCCcEEE
Confidence 9987532 112 12221111234455566775 4444 311222 577778777776655
No 101
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=82.64 E-value=25 Score=31.09 Aligned_cols=100 Identities=13% Similarity=0.049 Sum_probs=55.7
Q ss_pred CcEEEEEEcCCceee-EecCCCCCCCCCCceEEEEE-CCeEEEEE-ecCCCCccEEEEEEeccCCCCCCeEEEEEecCCC
Q 018497 208 PWLIVSFDFAKEIFQ-TVMMPYDLSTDDADKYLNVF-DGYLCVFA-TIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQ 284 (355)
Q Consensus 208 ~~~Il~fD~~~~~~~-~i~lP~~~~~~~~~~~L~~~-~G~L~~v~-~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~ 284 (355)
...|..+|+.+.+.. .+..+ .. ...+.-. +|+..++. +..+ ..+.||.+.. ........+....
T Consensus 283 d~~i~i~d~~~~~~~~~~~~~-~~-----v~~~~~s~~~~~l~~~~g~~d---g~i~v~~~~~----~~~~~~~~~~~h~ 349 (401)
T 4aez_A 283 DKQIHFWNAATGARVNTVDAG-SQ-----VTSLIWSPHSKEIMSTHGFPD---NNLSIWSYSS----SGLTKQVDIPAHD 349 (401)
T ss_dssp TCEEEEEETTTCCEEEEEECS-SC-----EEEEEECSSSSEEEEEECTTT---CEEEEEEEET----TEEEEEEEEECCS
T ss_pred CCEEEEEECCCCCEEEEEeCC-Cc-----EEEEEECCCCCeEEEEeecCC---CcEEEEecCC----ccceeEEEecCCC
Confidence 357889998876543 23322 11 1222222 35555543 3333 5999999885 3355555554332
Q ss_pred ceeEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEEE
Q 018497 285 RIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFKC 323 (355)
Q Consensus 285 ~~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~~~~ 323 (355)
.....+.+..+|..++. ...++ .+..||+.+++...
T Consensus 350 ~~v~~~~~s~dg~~l~s--~~~dg-~i~iw~~~~~~~~~ 385 (401)
T 4aez_A 350 TRVLYSALSPDGRILST--AASDE-NLKFWRVYDGDHVK 385 (401)
T ss_dssp SCCCEEEECTTSSEEEE--ECTTS-EEEEEECCC-----
T ss_pred CCEEEEEECCCCCEEEE--EeCCC-cEEEEECCCCcccc
Confidence 23444666778877776 53566 59999999887543
No 102
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=81.97 E-value=24 Score=30.25 Aligned_cols=33 Identities=9% Similarity=0.064 Sum_probs=22.5
Q ss_pred eEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEE
Q 018497 287 WWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFK 322 (355)
Q Consensus 287 ~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~~~ 322 (355)
...+.+..+|..++. ...++ .+.+||.++++..
T Consensus 276 v~~~~~sp~~~~l~s--~~~dg-~i~iwd~~~~~~~ 308 (368)
T 3mmy_A 276 VNGIAFHPVHGTLAT--VGSDG-RFSFWDKDARTKL 308 (368)
T ss_dssp EEEEEECTTTCCEEE--EETTS-CEEEEETTTTEEE
T ss_pred eEEEEEecCCCEEEE--EccCC-eEEEEECCCCcEE
Confidence 344566677766666 43667 4999999987654
No 103
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=81.82 E-value=27 Score=30.84 Aligned_cols=187 Identities=9% Similarity=-0.014 Sum_probs=91.5
Q ss_pred CCceEEEEcCCcccEEe-cCCCCCCCceeEEEEecCCCCCCcE-------EEE-EEcCCCceeEeccCCCceeeeccccc
Q 018497 113 DRSLIYLWNPLIKKYMT-LPRPSLNPRYLGFGVNSVSGHLDDF-------KVV-YSLRSNSWKNIAYGFPRSIEINRSHI 183 (355)
Q Consensus 113 ~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~g~d~~~~~~~~y-------kvv-yss~t~~W~~~~~~~p~~~~~~~~~~ 183 (355)
.++.+.|||..+++... +...........+.+.+. +..+ +|. |+.+++.-...- ...........
T Consensus 152 ~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~-~~~~~~~~~~~-- 225 (402)
T 2aq5_A 152 CDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRD---GALICTSCRDKRVRVIEPRKGTVVAEK-DRPHEGTRPVH-- 225 (402)
T ss_dssp TTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTT---SSCEEEEETTSEEEEEETTTTEEEEEE-ECSSCSSSCCE--
T ss_pred CCCEEEEEECCCCCccEEEecCCCCCceEEEEECCC---CCEEEEEecCCcEEEEeCCCCceeeee-ccCCCCCcceE--
Confidence 57789999999887653 321111112245555553 2211 111 777765432111 00000000000
Q ss_pred cceeEeCceEEEEEeeeccCCCCCCcEEEEEEcCCcee--eEecCCCCCCCCCCceEEEE-ECCeEEEEEecCCCCccEE
Q 018497 184 NSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIF--QTVMMPYDLSTDDADKYLNV-FDGYLCVFATIPNNTFRSY 260 (355)
Q Consensus 184 ~~~v~~~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~--~~i~lP~~~~~~~~~~~L~~-~~G~L~~v~~~~~~~~~~l 260 (355)
....-+|.+...+.. ......|..+|+.+..- ....++ ... ....+.- -+|+..++....+ ..+
T Consensus 226 -~~~~~~~~~l~~g~~-----~~~d~~i~iwd~~~~~~~~~~~~~~-~~~---~v~~~~~s~~~~~l~~~g~~d---g~i 292 (402)
T 2aq5_A 226 -AVFVSEGKILTTGFS-----RMSERQVALWDTKHLEEPLSLQELD-TSS---GVLLPFFDPDTNIVYLCGKGD---SSI 292 (402)
T ss_dssp -EEECSTTEEEEEEEC-----TTCCEEEEEEETTBCSSCSEEEECC-CCS---SCEEEEEETTTTEEEEEETTC---SCE
T ss_pred -EEEcCCCcEEEEecc-----CCCCceEEEEcCccccCCceEEecc-CCC---ceeEEEEcCCCCEEEEEEcCC---CeE
Confidence 012235665555411 01235899999986442 222333 211 1223332 3455554444333 599
Q ss_pred EEEEeccCCCCCCeE-EEEEecCCCceeEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEEEEEEe
Q 018497 261 ELWVMKEYGLTESWT-KLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFKCIGVH 327 (355)
Q Consensus 261 ~iW~l~~~~~~~~W~-~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~~~~v~~~ 327 (355)
.+|.++.. ..+. ......... ....+++..++.+++. .++ .+..|++.+++.+.+.+.
T Consensus 293 ~i~d~~~~---~~~~~~l~~~~~~~-~v~~~~~sp~~~~~~s----~~~-~~~~~~l~~~~~~~i~~~ 351 (402)
T 2aq5_A 293 RYFEITSE---APFLHYLSMFSSKE-SQRGMGYMPKRGLEVN----KCE-IARFYKLHERKCEPIAMT 351 (402)
T ss_dssp EEEEECSS---TTCEEEEEEECCSS-CCSEEEECCGGGSCGG----GTE-EEEEEEEETTEEEEEEEE
T ss_pred EEEEecCC---CcceEeecccccCC-cccceEEeccccccee----cce-eEEEEEcCCCcEEEEEEE
Confidence 99999862 2222 233333111 2444666667665544 455 488999999999888654
No 104
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=81.78 E-value=23 Score=30.03 Aligned_cols=108 Identities=15% Similarity=0.142 Sum_probs=58.7
Q ss_pred cEEEEEEcC--Cceee---Ee-cCCCCCCCCC-CceEEEEE-CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEe
Q 018497 209 WLIVSFDFA--KEIFQ---TV-MMPYDLSTDD-ADKYLNVF-DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTI 280 (355)
Q Consensus 209 ~~Il~fD~~--~~~~~---~i-~lP~~~~~~~-~~~~L~~~-~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i 280 (355)
..|..||+. +.++. .+ .+| ...... ....+.-. +|+..++..... ..+.+|.++... ..+..+..+
T Consensus 200 ~~i~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~i~~s~dg~~l~v~~~~~---~~i~v~d~~~~~--~~~~~~~~~ 273 (343)
T 1ri6_A 200 SSVDVWELKDPHGNIECVQTLDMMP-ENFSDTRWAADIHITPDGRHLYACDRTA---SLITVFSVSEDG--SVLSKEGFQ 273 (343)
T ss_dssp TEEEEEESSCTTSCCEEEEEEECSC-TTCCSCCCEEEEEECTTSSEEEEEETTT---TEEEEEEECTTS--CCEEEEEEE
T ss_pred CEEEEEEecCCCCcEEEEeeccccC-ccccccCCccceEECCCCCEEEEEecCC---CEEEEEEEcCCC--CceEEeeee
Confidence 578899984 34443 23 344 332111 11223333 354434444333 589999998532 356776666
Q ss_pred cCCCceeEeEEEeeCCcEEEEEEeeCCceEEEEE--eCCCCeEEEEE
Q 018497 281 EKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVY--NPHSDTFKCIG 325 (355)
Q Consensus 281 ~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~y--d~~t~~~~~v~ 325 (355)
+.... ...+++..+|+.++.. ...++ .+.+| |.++++++.+.
T Consensus 274 ~~~~~-~~~~~~s~dg~~l~~~-~~~~~-~v~v~~~d~~~g~~~~~~ 317 (343)
T 1ri6_A 274 PTETQ-PRGFNVDHSGKYLIAA-GQKSH-HISVYEIVGEQGLLHEKG 317 (343)
T ss_dssp ECSSS-CCCEEECTTSSEEEEE-CTTTC-EEEEEEEETTTTEEEEEE
T ss_pred cCCCc-cceEEECCCCCEEEEe-cCCCC-eEEEEEEcCCCceeeEcc
Confidence 65432 3346677778644441 31234 36666 88888887763
No 105
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=81.61 E-value=23 Score=29.79 Aligned_cols=189 Identities=12% Similarity=0.101 Sum_probs=96.1
Q ss_pred CCceEEEEcCCcccEEecCCCCCCCceeEEEEecCCCCCCcE-------EEE-EEcCCCceeEeccCCCceeeecccccc
Q 018497 113 DRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDF-------KVV-YSLRSNSWKNIAYGFPRSIEINRSHIN 184 (355)
Q Consensus 113 ~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~g~d~~~~~~~~y-------kvv-yss~t~~W~~~~~~~p~~~~~~~~~~~ 184 (355)
....++++||.++ ...+..+.. ...++.+++. ..-| .|. |+..+++.+.+. ............ .
T Consensus 48 ~~~~i~~~~~~~~-~~~~~~~~~--~~~~l~~~~d---g~l~v~~~~~~~i~~~d~~~g~~~~~~-~~~~~~~~~~~~-~ 119 (296)
T 3e5z_A 48 RQNRTWAWSDDGQ-LSPEMHPSH--HQNGHCLNKQ---GHLIACSHGLRRLERQREPGGEWESIA-DSFEGKKLNSPN-D 119 (296)
T ss_dssp GGTEEEEEETTSC-EEEEESSCS--SEEEEEECTT---CCEEEEETTTTEEEEECSTTCCEEEEE-CEETTEECCCCC-C
T ss_pred CCCEEEEEECCCC-eEEEECCCC--CcceeeECCC---CcEEEEecCCCeEEEEcCCCCcEEEEe-eccCCCCCCCCC-C
Confidence 4678999999998 555543221 1245666654 3211 222 777777776554 111111111111 0
Q ss_pred ceeEeCceEEEEEeeecc---------CCCCCCcEEEEEEcCCceeeEecCCCCCCCCCCceEEEEE-CCeEEEEEecCC
Q 018497 185 SSVFLNGSVHWCARFSCY---------HDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF-DGYLCVFATIPN 254 (355)
Q Consensus 185 ~~v~~~G~lyw~~~~~~~---------~~~~~~~~Il~fD~~~~~~~~i~lP~~~~~~~~~~~L~~~-~G~L~~v~~~~~ 254 (355)
..+.-+|.+|+....... ........|..+|.. .+...+.-. .. ..-.++.. +|++. +.....
T Consensus 120 i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~---~~--~~~gi~~s~dg~~l-v~~~~~ 192 (296)
T 3e5z_A 120 VCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRD---RV--KPNGLAFLPSGNLL-VSDTGD 192 (296)
T ss_dssp EEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECC---CS--SEEEEEECTTSCEE-EEETTT
T ss_pred EEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecC---CC--CCccEEECCCCCEE-EEeCCC
Confidence 022337887775321000 001113479999988 555544211 10 11223333 47666 444433
Q ss_pred CCccEEEEEEeccCCCCCCe-EEEEEecCCCceeEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEEEEEEe
Q 018497 255 NTFRSYELWVMKEYGLTESW-TKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFKCIGVH 327 (355)
Q Consensus 255 ~~~~~l~iW~l~~~~~~~~W-~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~~~~v~~~ 327 (355)
..+.+|.++.. ... .....+........-+++..+|.|++. . ++ .|..||++.+.+..+...
T Consensus 193 ---~~i~~~~~~~~---g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~--~--~~-~v~~~~~~g~~~~~~~~~ 255 (296)
T 3e5z_A 193 ---NATHRYCLNAR---GETEYQGVHFTVEPGKTDGLRVDAGGLIWAS--A--GD-GVHVLTPDGDELGRVLTP 255 (296)
T ss_dssp ---TEEEEEEECSS---SCEEEEEEEECCSSSCCCSEEEBTTSCEEEE--E--TT-EEEEECTTSCEEEEEECS
T ss_pred ---CeEEEEEECCC---CcCcCCCeEeeCCCCCCCeEEECCCCCEEEE--c--CC-eEEEECCCCCEEEEEECC
Confidence 47777877632 334 333333111112233666778898888 5 44 499999998877777654
No 106
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=81.55 E-value=24 Score=30.07 Aligned_cols=108 Identities=10% Similarity=-0.014 Sum_probs=60.4
Q ss_pred eCceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEecCCCCCCCCCCceEEEEE-CCeEEEEEecCCCCccEEEEEEecc
Q 018497 189 LNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF-DGYLCVFATIPNNTFRSYELWVMKE 267 (355)
Q Consensus 189 ~~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i~lP~~~~~~~~~~~L~~~-~G~L~~v~~~~~~~~~~l~iW~l~~ 267 (355)
-+|.+||..... ..|..+|+.++.-..+..+ .. ...++.. +|+|+++..... ...|+.++.
T Consensus 41 ~~g~lyv~d~~~--------~~I~~~d~~g~~~~~~~~~-~~-----p~gia~~~dG~l~vad~~~~----~~~v~~~d~ 102 (306)
T 2p4o_A 41 PDGTIFVTNHEV--------GEIVSITPDGNQQIHATVE-GK-----VSGLAFTSNGDLVATGWNAD----SIPVVSLVK 102 (306)
T ss_dssp TTSCEEEEETTT--------TEEEEECTTCCEEEEEECS-SE-----EEEEEECTTSCEEEEEECTT----SCEEEEEEC
T ss_pred CCCCEEEEeCCC--------CeEEEECCCCceEEEEeCC-CC-----ceeEEEcCCCcEEEEeccCC----cceEEEEcC
Confidence 378999987544 5899999987654444554 21 2234433 588887765432 334566543
Q ss_pred CCCCCCeEEEEEecCCCceeEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCe
Q 018497 268 YGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDT 320 (355)
Q Consensus 268 ~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~ 320 (355)
. .........++... ...-++.+.++.+|+. ....+ .++.+|+.+++
T Consensus 103 ~--~g~~~~~~~~~~~~-~~~g~~~~~~~~~~v~--d~~~g-~i~~~d~~~~~ 149 (306)
T 2p4o_A 103 S--DGTVETLLTLPDAI-FLNGITPLSDTQYLTA--DSYRG-AIWLIDVVQPS 149 (306)
T ss_dssp T--TSCEEEEEECTTCS-CEEEEEESSSSEEEEE--ETTTT-EEEEEETTTTE
T ss_pred C--CCeEEEEEeCCCcc-ccCcccccCCCcEEEE--ECCCC-eEEEEeCCCCc
Confidence 2 23344444443222 1122233445566666 42345 59999998754
No 107
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=81.44 E-value=25 Score=31.23 Aligned_cols=73 Identities=7% Similarity=-0.055 Sum_probs=45.1
Q ss_pred CeEEEEEecCCC---CccEEEEEEeccCCCCCCeEEEEEecCCCceeEeEEEeeCCc-EEEEEEeeC-CceEEEEEeCCC
Q 018497 244 GYLCVFATIPNN---TFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGK-IFIRGECRH-GGYGLLVYNPHS 318 (355)
Q Consensus 244 G~L~~v~~~~~~---~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~-i~~~~~~~~-~~~~l~~yd~~t 318 (355)
++||+....... ....=.||+++- .....+.+|+... ....+.+..+|+ .++. ... ++ .|.+||.+|
T Consensus 279 ~~lyV~~~~~~~~~~~~~~~~V~VID~----~t~~vv~~i~~g~-~p~~i~~s~Dg~~~l~v--~~~~~~-~V~ViD~~t 350 (373)
T 2mad_H 279 DGIYLLTSEQSAWKLHAAAKEVTSVTG----LVGQTSSQISLGH-DVDAISVAQDGGPDLYA--LSAGTE-VLHIYDAGA 350 (373)
T ss_pred CEEEEEeccCCcccccCCCCeEEEEEC----CCCEEEEEEECCC-CcCeEEECCCCCeEEEE--EcCCCC-eEEEEECCC
Confidence 577776543110 001235888875 3467777887654 244567778887 6666 412 44 699999999
Q ss_pred CeEEEE
Q 018497 319 DTFKCI 324 (355)
Q Consensus 319 ~~~~~v 324 (355)
.+....
T Consensus 351 ~~vv~~ 356 (373)
T 2mad_H 351 GDQDQS 356 (373)
T ss_pred CCEEee
Confidence 887654
No 108
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=81.41 E-value=24 Score=30.07 Aligned_cols=200 Identities=10% Similarity=0.001 Sum_probs=98.7
Q ss_pred eeCceEEEeecCCCCceEEEEcCCcccEEecCCCCCCCceeEEEEecCCCCCCc-----------EEEE-EEcCCCceeE
Q 018497 100 SCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDD-----------FKVV-YSLRSNSWKN 167 (355)
Q Consensus 100 s~~GLl~l~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~g~d~~~~~~~~-----------ykvv-yss~t~~W~~ 167 (355)
+.+|-|.+... ....++++||.+++...+..... ....++.+++. ..- -.|. |+..++.-+.
T Consensus 53 ~~~g~l~~~~~--~~~~i~~~d~~~~~~~~~~~~~~-~~~~~i~~~~d---g~l~v~~~~~~~~~~~i~~~d~~~~~~~~ 126 (333)
T 2dg1_A 53 DRQGQLFLLDV--FEGNIFKINPETKEIKRPFVSHK-ANPAAIKIHKD---GRLFVCYLGDFKSTGGIFAATENGDNLQD 126 (333)
T ss_dssp CTTSCEEEEET--TTCEEEEECTTTCCEEEEEECSS-SSEEEEEECTT---SCEEEEECTTSSSCCEEEEECTTSCSCEE
T ss_pred CCCCCEEEEEC--CCCEEEEEeCCCCcEEEEeeCCC-CCcceEEECCC---CcEEEEeCCCCCCCceEEEEeCCCCEEEE
Confidence 45676665543 46789999999988876532111 11245555554 211 1222 5555554432
Q ss_pred eccCCCceeeeccccccceeE--eCceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEecCCCCCCCCCCceEEEEE-CC
Q 018497 168 IAYGFPRSIEINRSHINSSVF--LNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF-DG 244 (355)
Q Consensus 168 ~~~~~p~~~~~~~~~~~~~v~--~~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i~lP~~~~~~~~~~~L~~~-~G 244 (355)
+-....... ... .+. -+|.+|+..... ........|..+|..+++...+.-. .. ....++.. +|
T Consensus 127 ~~~~~~~~~---~~~---~i~~d~~g~l~v~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~--~~---~~~~i~~~~dg 193 (333)
T 2dg1_A 127 IIEDLSTAY---CID---DMVFDSKGGFYFTDFRG--YSTNPLGGVYYVSPDFRTVTPIIQN--IS---VANGIALSTDE 193 (333)
T ss_dssp EECSSSSCC---CEE---EEEECTTSCEEEEECCC--BTTBCCEEEEEECTTSCCEEEEEEE--ES---SEEEEEECTTS
T ss_pred EEccCccCC---ccc---ceEECCCCCEEEEeccc--cccCCCceEEEEeCCCCEEEEeecC--CC---cccceEECCCC
Confidence 210111000 000 222 367777654421 0011235799999987766554211 00 11223332 45
Q ss_pred e-EEEEEecCCCCccEEEEEEeccCCCCCCeEEE---EEecCCC-ceeEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCC
Q 018497 245 Y-LCVFATIPNNTFRSYELWVMKEYGLTESWTKL---YTIEKPQ-RIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSD 319 (355)
Q Consensus 245 ~-L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~---~~i~~~~-~~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~ 319 (355)
+ |++..... ..+.+|.++..+ ...... ....... ....-+++..+|.+++. ...++ .|..||++++
T Consensus 194 ~~l~v~~~~~----~~i~~~d~~~~g--~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~--~~~~~-~v~~~d~~g~ 264 (333)
T 2dg1_A 194 KVLWVTETTA----NRLHRIALEDDG--VTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVA--MYGQG-RVLVFNKRGY 264 (333)
T ss_dssp SEEEEEEGGG----TEEEEEEECTTS--SSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEE--EETTT-EEEEECTTSC
T ss_pred CEEEEEeCCC----CeEEEEEecCCC--cCcccccceEEEecCCCCCCCceEECCCCCEEEE--EcCCC-EEEEECCCCC
Confidence 4 66655433 477777765322 122211 1111111 12333566677888887 52345 4999999877
Q ss_pred eEEEEEEe
Q 018497 320 TFKCIGVH 327 (355)
Q Consensus 320 ~~~~v~~~ 327 (355)
.++.+...
T Consensus 265 ~~~~~~~~ 272 (333)
T 2dg1_A 265 PIGQILIP 272 (333)
T ss_dssp EEEEEECT
T ss_pred EEEEEEcC
Confidence 77776543
No 109
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=80.91 E-value=26 Score=30.06 Aligned_cols=97 Identities=14% Similarity=0.100 Sum_probs=56.7
Q ss_pred cEEEEEEcCCceeeE-ecCCCCCCCCCCceEEEEE-CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCce
Q 018497 209 WLIVSFDFAKEIFQT-VMMPYDLSTDDADKYLNVF-DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRI 286 (355)
Q Consensus 209 ~~Il~fD~~~~~~~~-i~lP~~~~~~~~~~~L~~~-~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~ 286 (355)
..|..+|+.+.+... +.-. .. ....+.-. +|++.+....+ ..+.||.++.. .....+......
T Consensus 186 g~i~iwd~~~~~~~~~~~~h-~~----~v~~l~~spd~~~l~s~s~d----g~i~iwd~~~~------~~~~~~~~h~~~ 250 (321)
T 3ow8_A 186 GIINIFDIATGKLLHTLEGH-AM----PIRSLTFSPDSQLLVTASDD----GYIKIYDVQHA------NLAGTLSGHASW 250 (321)
T ss_dssp SCEEEEETTTTEEEEEECCC-SS----CCCEEEECTTSCEEEEECTT----SCEEEEETTTC------CEEEEECCCSSC
T ss_pred CeEEEEECCCCcEEEEEccc-CC----ceeEEEEcCCCCEEEEEcCC----CeEEEEECCCc------ceeEEEcCCCCc
Confidence 578899998776532 3221 11 11223332 46666655554 48999988741 223344322223
Q ss_pred eEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEEE
Q 018497 287 WWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFKC 323 (355)
Q Consensus 287 ~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~~~~ 323 (355)
...+++..+|..++. ...++ .+.+||+++++...
T Consensus 251 v~~~~~sp~~~~l~s--~s~D~-~v~iwd~~~~~~~~ 284 (321)
T 3ow8_A 251 VLNVAFCPDDTHFVS--SSSDK-SVKVWDVGTRTCVH 284 (321)
T ss_dssp EEEEEECTTSSEEEE--EETTS-CEEEEETTTTEEEE
T ss_pred eEEEEECCCCCEEEE--EeCCC-cEEEEeCCCCEEEE
Confidence 455667777877776 43667 49999999887544
No 110
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=80.81 E-value=29 Score=30.50 Aligned_cols=95 Identities=15% Similarity=0.111 Sum_probs=53.8
Q ss_pred EEEEEEcCCce--eeEecCCCCCCCCCCceEEEEE--CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCc
Q 018497 210 LIVSFDFAKEI--FQTVMMPYDLSTDDADKYLNVF--DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQR 285 (355)
Q Consensus 210 ~Il~fD~~~~~--~~~i~lP~~~~~~~~~~~L~~~--~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~ 285 (355)
.|..+|+.+.. ...+. .. .......+.-. +|++.+....+ ..+.+|.++. ...+..+.....
T Consensus 241 ~i~~~d~~~~~~~~~~~~---~~-~~~~v~~~~~s~~~~~~l~s~~~d----g~v~~wd~~~------~~~~~~~~~~~~ 306 (416)
T 2pm9_A 241 SILIWDLRNANTPLQTLN---QG-HQKGILSLDWCHQDEHLLLSSGRD----NTVLLWNPES------AEQLSQFPARGN 306 (416)
T ss_dssp CCCEEETTSTTSCSBCCC---SC-CSSCEEEEEECSSCSSCEEEEESS----SEEEEECSSS------CCEEEEEECSSS
T ss_pred eEEEEeCCCCCCCcEEee---cC-ccCceeEEEeCCCCCCeEEEEeCC----CCEEEeeCCC------CccceeecCCCC
Confidence 68889988743 11111 00 11112233332 56776666665 4899998764 133444433222
Q ss_pred eeEeEEEeeCC-cEEEEEEeeCCceEEEEEeCCCCeE
Q 018497 286 IWWPLGFTERG-KIFIRGECRHGGYGLLVYNPHSDTF 321 (355)
Q Consensus 286 ~~~~~~~~~~g-~i~~~~~~~~~~~~l~~yd~~t~~~ 321 (355)
....+.+..++ .+++. ...++ .+.+||+++.+.
T Consensus 307 ~v~~~~~s~~~~~~l~s--~~~d~-~i~iw~~~~~~~ 340 (416)
T 2pm9_A 307 WCFKTKFAPEAPDLFAC--ASFDN-KIEVQTLQNLTN 340 (416)
T ss_dssp CCCCEEECTTCTTEEEE--CCSSS-EEEEEESCCCCC
T ss_pred ceEEEEECCCCCCEEEE--EecCC-cEEEEEccCCCC
Confidence 24446667777 67777 53566 599999988663
No 111
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=80.10 E-value=29 Score=30.06 Aligned_cols=108 Identities=12% Similarity=0.160 Sum_probs=60.2
Q ss_pred cEEEEEEcCCceeeEe-cCCCCCCCC-CCceEEEEE-CCeEEEEEecC-CCCccEEEEEEeccCCCCCCeEEEEEecCCC
Q 018497 209 WLIVSFDFAKEIFQTV-MMPYDLSTD-DADKYLNVF-DGYLCVFATIP-NNTFRSYELWVMKEYGLTESWTKLYTIEKPQ 284 (355)
Q Consensus 209 ~~Il~fD~~~~~~~~i-~lP~~~~~~-~~~~~L~~~-~G~L~~v~~~~-~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~ 284 (355)
..|..||+.+.++..+ .++ ..... .....+... +|+..++.... . ..+.||.++.. ...+..+..++...
T Consensus 233 ~~v~v~~~~~g~~~~~~~~~-~~~~~~~~~~~i~~spdg~~l~v~~~~~~---~~i~v~~~~~~--~g~~~~~~~~~~g~ 306 (361)
T 3scy_A 233 GTVIAFRYADGMLDEIQTVA-ADTVNAQGSGDIHLSPDGKYLYASNRLKA---DGVAIFKVDET--NGTLTKVGYQLTGI 306 (361)
T ss_dssp CEEEEEEEETTEEEEEEEEE-SCSSCCCCEEEEEECTTSSEEEEEECSSS---CEEEEEEECTT--TCCEEEEEEEECSS
T ss_pred CeEEEEEecCCceEEeEEEe-cCCCCCCCcccEEECCCCCEEEEECCCCC---CEEEEEEEcCC--CCcEEEeeEecCCC
Confidence 5799999988877554 222 11111 112233333 47644444433 3 58999999742 24566666665421
Q ss_pred ceeEeEEEeeCCcEEEEEEeeCCce-EEEEEeCCCCeEEEE
Q 018497 285 RIWWPLGFTERGKIFIRGECRHGGY-GLLVYNPHSDTFKCI 324 (355)
Q Consensus 285 ~~~~~~~~~~~g~i~~~~~~~~~~~-~l~~yd~~t~~~~~v 324 (355)
...-+++..+|+.++.. ...++. .++.+|.++++++.+
T Consensus 307 -~~~~~~~spdg~~l~~~-~~~~~~v~v~~~d~~~g~~~~~ 345 (361)
T 3scy_A 307 -HPRNFIITPNGKYLLVA-CRDTNVIQIFERDQATGLLTDI 345 (361)
T ss_dssp -CCCEEEECTTSCEEEEE-ETTTTEEEEEEECTTTCCEEEC
T ss_pred -CCceEEECCCCCEEEEE-ECCCCCEEEEEEECCCCcEeec
Confidence 23446677888644441 313342 344478889988776
No 112
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=80.08 E-value=8.4 Score=37.82 Aligned_cols=115 Identities=12% Similarity=0.143 Sum_probs=57.2
Q ss_pred eeEe---CceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEecCCCCCCCCCCceEEEE--ECCeEEEEEecCCCCccEE
Q 018497 186 SVFL---NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNV--FDGYLCVFATIPNNTFRSY 260 (355)
Q Consensus 186 ~v~~---~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i~lP~~~~~~~~~~~L~~--~~G~L~~v~~~~~~~~~~l 260 (355)
++.+ +|.|||..... ...|..+|+.......+-. .... ..-.|+. .+|+||++.... ..
T Consensus 500 giavDp~~g~ly~td~~~-------~~~I~~~~~dG~~~~~l~~--~~l~--~PnGlavd~~~~~LY~aD~~~----~~- 563 (699)
T 1n7d_A 500 AIVVDPVHGFMYWTDWGT-------PAKIKKGGLNGVDIYSLVT--ENIQ--WPNGITLDLLSGRLYWVDSKL----HS- 563 (699)
T ss_dssp CEECCSSSSCCEECCCSS-------SCCEEBCCSSSCCCCEESC--SSCS--SCCCEEECTTTCCEEEEETTT----TE-
T ss_pred eEEEccCCCcEEEcccCC-------CCeEEEEeCCCCCeeEEEe--CCCC--CccEEEEeccCCEEEEEecCC----Ce-
Confidence 4554 68999976431 2478888887554443310 0110 1112333 358898887543 24
Q ss_pred EEEEeccCCCCCCeEEEEEecCCCceeEeEEEee-CCcEEEEEEeeCCceEEEEEeCCCCeEEEE
Q 018497 261 ELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTE-RGKIFIRGECRHGGYGLLVYNPHSDTFKCI 324 (355)
Q Consensus 261 ~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~-~g~i~~~~~~~~~~~~l~~yd~~t~~~~~v 324 (355)
|++++-.+. . -..+ +........|.+++. .+.||+. ....+ .|..+|..+++...+
T Consensus 564 -I~~~d~dG~-~-~~~~--~~~~~~~~~P~glavd~~~lywt--d~~~~-~V~~~d~~~G~~~~~ 620 (699)
T 1n7d_A 564 -ISSIDVNGG-N-RKTI--LEDEKRLAHPFSLAVFEDKVFWT--DIINE-AIFSANRLTGSDVNL 620 (699)
T ss_dssp -EEEECSSSS-C-CEEE--CCCSSSCSSCCCCEEETTEEEEE--CSTTT-CEEEEETTTEEEEEC
T ss_pred -EEEEccCCC-c-eEEE--EecCCcCCCceEeEEECCEEEEE--eCCCC-eEEEEEccCCCceEE
Confidence 444443221 1 1111 111111123444332 3467777 52334 599999988775443
No 113
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=79.86 E-value=26 Score=29.48 Aligned_cols=97 Identities=9% Similarity=0.140 Sum_probs=53.9
Q ss_pred cEEEEEEcCCceeeEe-cCCCCCCCCCCceEEEEE---CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCC
Q 018497 209 WLIVSFDFAKEIFQTV-MMPYDLSTDDADKYLNVF---DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQ 284 (355)
Q Consensus 209 ~~Il~fD~~~~~~~~i-~lP~~~~~~~~~~~L~~~---~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~ 284 (355)
..|..+|+.+++...+ .+. .... .-..+.-. +|.+.+.+..+ .++.||.++. ..|.....+....
T Consensus 31 ~~v~iw~~~~~~~~~~~~l~-gH~~--~V~~v~~s~~~~g~~l~s~s~D----~~v~iWd~~~----~~~~~~~~~~~h~ 99 (297)
T 2pm7_B 31 KTIKIFEVEGETHKLIDTLT-GHEG--PVWRVDWAHPKFGTILASCSYD----GKVMIWKEEN----GRWSQIAVHAVHS 99 (297)
T ss_dssp SCEEEEEBCSSCBCCCEEEC-CCSS--CEEEEEECCGGGCSEEEEEETT----TEEEEEEBSS----SCBCCCEEECCCS
T ss_pred CEEEEEecCCCCcEEEEEEc-cccC--CeEEEEecCCCcCCEEEEEcCC----CEEEEEEcCC----CceEEEEEeecCC
Confidence 4688889876543222 222 2211 11223222 26776666655 4999999874 3455555443222
Q ss_pred ceeEeEEEeeC--CcEEEEEEeeCCceEEEEEeCCCC
Q 018497 285 RIWWPLGFTER--GKIFIRGECRHGGYGLLVYNPHSD 319 (355)
Q Consensus 285 ~~~~~~~~~~~--g~i~~~~~~~~~~~~l~~yd~~t~ 319 (355)
.....+.+..+ |.+++. ...++ .+..||++++
T Consensus 100 ~~v~~v~~~p~~~g~~l~s--~s~d~-~v~~wd~~~~ 133 (297)
T 2pm7_B 100 ASVNSVQWAPHEYGPMLLV--ASSDG-KVSVVEFKEN 133 (297)
T ss_dssp SCEEEEEECCGGGCSEEEE--EETTS-EEEEEEBCSS
T ss_pred CceeEEEeCcCCCCcEEEE--EECCC-cEEEEEecCC
Confidence 23445666554 666666 43666 4999998876
No 114
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=79.09 E-value=35 Score=30.43 Aligned_cols=186 Identities=11% Similarity=0.031 Sum_probs=93.1
Q ss_pred eeCceEEEeecCCCCceEEEEcCCcccEEecCCCCCCCceeEEEEecCCCCCCcEEEE---------EEcCCCceeEecc
Q 018497 100 SCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVV---------YSLRSNSWKNIAY 170 (355)
Q Consensus 100 s~~GLl~l~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykvv---------yss~t~~W~~~~~ 170 (355)
..+|.|.+.+. ...+++.+++.++....+..... ....++.+|+. .+...+. ++.....-+.+.
T Consensus 125 ~~~~~ly~~D~--~~~~I~r~~~~g~~~~~~~~~~~-~~p~glavd~~---~g~lY~~d~~~~~I~~~~~dg~~~~~l~- 197 (386)
T 3v65_B 125 HRRELVFWSDV--TLDRILRANLNGSNVEEVVSTGL-ESPGGLAVDWV---HDKLYWTDSGTSRIEVANLDGAHRKVLL- 197 (386)
T ss_dssp TTTTEEEEEET--TTTEEEEEETTSCCEEEEECSSC-SCCCCEEEETT---TTEEEEEETTTTEEEECBTTSCSCEEEE-
T ss_pred cCCCeEEEEeC--CCCcEEEEecCCCCcEEEEeCCC-CCccEEEEEeC---CCeEEEEcCCCCeEEEEeCCCCceEEee-
Confidence 35677777764 56788888988776544322111 11146777765 4433222 222221111111
Q ss_pred CCCceeeeccccccceeEe---CceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEecCCCCCCCCCCceEEEE--ECCe
Q 018497 171 GFPRSIEINRSHINSSVFL---NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNV--FDGY 245 (355)
Q Consensus 171 ~~p~~~~~~~~~~~~~v~~---~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i~lP~~~~~~~~~~~L~~--~~G~ 245 (355)
... . .... ++.+ +|.|||..... ...|..+|++...-..+-- .... ..-.|+. .+|+
T Consensus 198 ~~~--l--~~P~---giavdp~~g~ly~td~~~-------~~~I~r~~~dG~~~~~~~~--~~~~--~PnGlavd~~~~~ 259 (386)
T 3v65_B 198 WQS--L--EKPR---AIALHPMEGTIYWTDWGN-------TPRIEASSMDGSGRRIIAD--THLF--WPNGLTIDYAGRR 259 (386)
T ss_dssp CSS--C--SCEE---EEEEETTTTEEEEEECSS-------SCEEEEEETTSCSCEEEEC--SSCS--CEEEEEEEGGGTE
T ss_pred cCC--C--CCCc---EEEEEcCCCeEEEeccCC-------CCEEEEEeCCCCCcEEEEE--CCCC--CeeeEEEeCCCCE
Confidence 000 0 1111 4433 68999986532 3689999998655444311 1110 1223444 4689
Q ss_pred EEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEeEEEe-eCCcEEEEEEeeCCceEEEEEeCCCCe-EEE
Q 018497 246 LCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFT-ERGKIFIRGECRHGGYGLLVYNPHSDT-FKC 323 (355)
Q Consensus 246 L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~-~~g~i~~~~~~~~~~~~l~~yd~~t~~-~~~ 323 (355)
||++..... . |+..+-.+. .. ... +... ...|.++. .++.||+. ....+ .|..+|..+++ .+.
T Consensus 260 lY~aD~~~~----~--I~~~d~dG~-~~-~~~--~~~~--~~~P~giav~~~~ly~t--d~~~~-~V~~~~~~~G~~~~~ 324 (386)
T 3v65_B 260 MYWVDAKHH----V--IERANLDGS-HR-KAV--ISQG--LPHPFAITVFEDSLYWT--DWHTK-SINSANKFTGKNQEI 324 (386)
T ss_dssp EEEEETTTT----E--EEEECTTSC-SC-EEE--ECSS--CSSEEEEEEETTEEEEE--ETTTT-EEEEEETTTCCSCEE
T ss_pred EEEEECCCC----E--EEEEeCCCC-ee-EEE--EECC--CCCceEEEEECCEEEEe--eCCCC-eEEEEECCCCcceEE
Confidence 999876432 3 555553322 11 111 1111 12344443 45578888 52344 69999955544 455
Q ss_pred EE
Q 018497 324 IG 325 (355)
Q Consensus 324 v~ 325 (355)
+.
T Consensus 325 i~ 326 (386)
T 3v65_B 325 IR 326 (386)
T ss_dssp EE
T ss_pred Ec
Confidence 54
No 115
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=78.57 E-value=13 Score=35.45 Aligned_cols=115 Identities=10% Similarity=0.099 Sum_probs=60.7
Q ss_pred eeEeCceEEEEEe-eeccCCCCCCcEEEEEEc-CCc--eeeEecCCCCCC-------CCCCceEEEEECCeEEEEEecCC
Q 018497 186 SVFLNGSVHWCAR-FSCYHDNSCPWLIVSFDF-AKE--IFQTVMMPYDLS-------TDDADKYLNVFDGYLCVFATIPN 254 (355)
Q Consensus 186 ~v~~~G~lyw~~~-~~~~~~~~~~~~Il~fD~-~~~--~~~~i~lP~~~~-------~~~~~~~L~~~~G~L~~v~~~~~ 254 (355)
+++.+|.+|.... .. .+.++|. .+. .|+. +++ ... .+.....++..+|+|++....
T Consensus 58 P~v~~g~vyv~~~~~~---------~v~AlD~~~tG~~~W~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d-- 124 (571)
T 2ad6_A 58 PLVIGDMMYVHSAFPN---------NTYALNLNDPGKIVWQH-KPK-QDASTKAVMCCDVVDRGLAYGAGQIVKKQAN-- 124 (571)
T ss_dssp CEEETTEEEEECSTTT---------CEEEEETTCTTSEEEEE-CCC-CCGGGGGGCTTCSCCCCCEEETTEEEEECTT--
T ss_pred cEEECCEEEEEeCCCC---------EEEEEeCCCCccEEEEE-cCC-CCccccccccccccccccEEECCEEEEEeCC--
Confidence 7889999999876 43 7999998 544 5654 222 110 000111234567777665432
Q ss_pred CCccEEEEEEeccCCCCCCeEEEEEecC-C-CceeEeEEEeeCCcEEEEEEeeC-----CceEEEEEeCCCCeEEE
Q 018497 255 NTFRSYELWVMKEYGLTESWTKLYTIEK-P-QRIWWPLGFTERGKIFIRGECRH-----GGYGLLVYNPHSDTFKC 323 (355)
Q Consensus 255 ~~~~~l~iW~l~~~~~~~~W~~~~~i~~-~-~~~~~~~~~~~~g~i~~~~~~~~-----~~~~l~~yd~~t~~~~~ 323 (355)
..+ ..++-...+..|.....-.. . .....|+. .+|.||+. ... ++ .++.||.+|++...
T Consensus 125 ---g~l--~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v--~~g~v~vg--~~~~~~~~~g-~v~a~D~~tG~~~W 190 (571)
T 2ad6_A 125 ---GHL--LALDAKTGKINWEVEVCDPKVGSTLTQAPFV--AKDTVLMG--CSGAELGVRG-AVNAFDLKTGELKW 190 (571)
T ss_dssp ---SEE--EEEETTTCCEEEEEECCCGGGTCBCCSCCEE--ETTEEEEE--CBCGGGTCCC-EEEEEETTTCCEEE
T ss_pred ---CEE--EEEECCCCCEEEEecCCCCCccceeccCCEE--ECCEEEEE--ecCCccCCCC-EEEEEECCCCcEEE
Confidence 233 34443222355665321100 0 00122332 35677766 411 35 59999999988654
No 116
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=78.55 E-value=36 Score=35.45 Aligned_cols=173 Identities=5% Similarity=0.028 Sum_probs=85.6
Q ss_pred CCceEEEEcCCcccEEecCCCCCCCceeEEEEecCC------CCCCcEEEEEEcCCCceeEeccCCCceeeeccccccce
Q 018497 113 DRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVS------GHLDDFKVVYSLRSNSWKNIAYGFPRSIEINRSHINSS 186 (355)
Q Consensus 113 ~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~g~d~~~------~~~~~ykvvyss~t~~W~~~~~~~p~~~~~~~~~~~~~ 186 (355)
.++.+.++|..+++.......... ....+.+.+.. +..+..++ |+..++...... ......... .
T Consensus 981 ~~g~i~i~d~~~~~~~~~~~~h~~-~v~~l~~s~dg~~l~s~~~dg~i~v-wd~~~~~~~~~~-~~~~~v~~~------~ 1051 (1249)
T 3sfz_A 981 EDGAIKIIELPNNRVFSSGVGHKK-AVRHIQFTADGKTLISSSEDSVIQV-WNWQTGDYVFLQ-AHQETVKDF------R 1051 (1249)
T ss_dssp TTSCCEEEETTTTSCEEECCCCSS-CCCCEEECSSSSCEEEECSSSBEEE-EETTTTEEECCB-CCSSCEEEE------E
T ss_pred CCCCEEEEEcCCCceeeecccCCC-ceEEEEECCCCCEEEEEcCCCEEEE-EECCCCceEEEe-cCCCcEEEE------E
Confidence 567788888888765543222111 11334444430 00112222 777776655333 111111110 1
Q ss_pred eEeCceEEEEEeeeccCCCCCCcEEEEEEcCCceeeE-ecCCCCCCCCCCceEEE-EECCeEEEEEecCCCCccEEEEEE
Q 018497 187 VFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQT-VMMPYDLSTDDADKYLN-VFDGYLCVFATIPNNTFRSYELWV 264 (355)
Q Consensus 187 v~~~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~-i~lP~~~~~~~~~~~L~-~~~G~L~~v~~~~~~~~~~l~iW~ 264 (355)
..-+|.+.....+ ..|..+|+.+.+... +... ... ...+. .-+|++.++...+ ..+.+|.
T Consensus 1052 ~~~~~~l~~~~~d---------g~v~vwd~~~~~~~~~~~~~-~~~----v~~~~~s~d~~~l~s~s~d----~~v~iwd 1113 (1249)
T 3sfz_A 1052 LLQDSRLLSWSFD---------GTVKVWNVITGRIERDFTCH-QGT----VLSCAISSDATKFSSTSAD----KTAKIWS 1113 (1249)
T ss_dssp ECSSSEEEEEESS---------SEEEEEETTTTCCCEEEECC-SSC----CCCEEECSSSSSCEEECCS----SCCCEEC
T ss_pred EcCCCcEEEEECC---------CcEEEEECCCCceeEEEccc-CCc----EEEEEECCCCCEEEEEcCC----CcEEEEE
Confidence 1224444333333 479999998776532 2222 111 11122 2346665555544 4889998
Q ss_pred eccCCCCCCeEEEEEecCCCceeEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeE
Q 018497 265 MKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTF 321 (355)
Q Consensus 265 l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~~ 321 (355)
++... ....+.........+++..+|..++. ...++ .+.+||+++++.
T Consensus 1114 ~~~~~------~~~~l~~h~~~v~~~~~s~dg~~lat--~~~dg-~i~vwd~~~~~~ 1161 (1249)
T 3sfz_A 1114 FDLLS------PLHELKGHNGCVRCSAFSLDGILLAT--GDDNG-EIRIWNVSDGQL 1161 (1249)
T ss_dssp SSSSS------CSBCCCCCSSCEEEEEECSSSSEEEE--EETTS-CCCEEESSSSCC
T ss_pred CCCcc------eeeeeccCCCcEEEEEECCCCCEEEE--EeCCC-EEEEEECCCCce
Confidence 87521 11112211113455677778877777 43666 499999988764
No 117
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=78.55 E-value=36 Score=30.32 Aligned_cols=182 Identities=9% Similarity=-0.007 Sum_probs=90.9
Q ss_pred CceEEEeecCCCCceEEEEcCCcccEEecCCCCCCCceeEEEEecCCCCCCcEEEE---------EEcCCCceeEeccCC
Q 018497 102 NGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVV---------YSLRSNSWKNIAYGF 172 (355)
Q Consensus 102 ~GLl~l~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykvv---------yss~t~~W~~~~~~~ 172 (355)
.+.|++.. ...+...++.+++...+-... ....++.+|+. .+...+. ++..++..+.+. ..
T Consensus 87 ~~~l~~~~----~~~I~~i~~~~~~~~~~~~~~--~~~~gl~~d~~---~~~ly~~D~~~~~I~r~~~~g~~~~~~~-~~ 156 (386)
T 3v65_B 87 EPVLLFAN----RIDIRQVLPHRSEYTLLLNNL--ENAIALDFHHR---RELVFWSDVTLDRILRANLNGSNVEEVV-ST 156 (386)
T ss_dssp CCEEEEEC----BSCEEEECTTSCCCEEEECSC--SCEEEEEEETT---TTEEEEEETTTTEEEEEETTSCCEEEEE-CS
T ss_pred cceeEeec----CccceeeccCCCcEEEEecCC--CccEEEEEecC---CCeEEEEeCCCCcEEEEecCCCCcEEEE-eC
Confidence 44555444 345666677665554432211 12367778865 4433332 555555444332 11
Q ss_pred CceeeeccccccceeE---eCceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEecCCCCCCCCCCceEEEEE--CCeEE
Q 018497 173 PRSIEINRSHINSSVF---LNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF--DGYLC 247 (355)
Q Consensus 173 p~~~~~~~~~~~~~v~---~~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i~lP~~~~~~~~~~~L~~~--~G~L~ 247 (355)
... ... ++. .+|.|||..... ..|.++|++......+. . .... ....++.. +|.|+
T Consensus 157 ~~~----~p~---glavd~~~g~lY~~d~~~--------~~I~~~~~dg~~~~~l~-~-~~l~--~P~giavdp~~g~ly 217 (386)
T 3v65_B 157 GLE----SPG---GLAVDWVHDKLYWTDSGT--------SRIEVANLDGAHRKVLL-W-QSLE--KPRAIALHPMEGTIY 217 (386)
T ss_dssp SCS----CCC---CEEEETTTTEEEEEETTT--------TEEEECBTTSCSCEEEE-C-SSCS--CEEEEEEETTTTEEE
T ss_pred CCC----Ccc---EEEEEeCCCeEEEEcCCC--------CeEEEEeCCCCceEEee-c-CCCC--CCcEEEEEcCCCeEE
Confidence 110 011 333 368999987654 58999998865544431 1 1111 12334444 57888
Q ss_pred EEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEeEEEe-eCCcEEEEEEeeCCceEEEEEeCCCCeEEEE
Q 018497 248 VFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFT-ERGKIFIRGECRHGGYGLLVYNPHSDTFKCI 324 (355)
Q Consensus 248 ~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~-~~g~i~~~~~~~~~~~~l~~yd~~t~~~~~v 324 (355)
+..... .-.|++.+-.+.. ... .+........-+++. .++.||+. ..... .|..+|++....+.+
T Consensus 218 ~td~~~-----~~~I~r~~~dG~~---~~~-~~~~~~~~PnGlavd~~~~~lY~a--D~~~~-~I~~~d~dG~~~~~~ 283 (386)
T 3v65_B 218 WTDWGN-----TPRIEASSMDGSG---RRI-IADTHLFWPNGLTIDYAGRRMYWV--DAKHH-VIERANLDGSHRKAV 283 (386)
T ss_dssp EEECSS-----SCEEEEEETTSCS---CEE-EECSSCSCEEEEEEEGGGTEEEEE--ETTTT-EEEEECTTSCSCEEE
T ss_pred EeccCC-----CCEEEEEeCCCCC---cEE-EEECCCCCeeeEEEeCCCCEEEEE--ECCCC-EEEEEeCCCCeeEEE
Confidence 876543 2345666543321 111 111111012234444 35578888 52334 599999887655444
No 118
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=78.04 E-value=33 Score=29.63 Aligned_cols=102 Identities=11% Similarity=0.164 Sum_probs=59.3
Q ss_pred cEEEEEEcCCceeeEe-cCCCCCCCCCCceEEEEE-CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCce
Q 018497 209 WLIVSFDFAKEIFQTV-MMPYDLSTDDADKYLNVF-DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRI 286 (355)
Q Consensus 209 ~~Il~fD~~~~~~~~i-~lP~~~~~~~~~~~L~~~-~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~ 286 (355)
..|..+|..++.+..+ .+. .... ....+.-. +|++.+.+..+ ..+.||.++.. ..+.....+......
T Consensus 83 ~~v~iw~~~~~~~~~~~~~~-~h~~--~v~~v~~sp~~~~l~s~s~D----~~v~iwd~~~~---~~~~~~~~~~~h~~~ 152 (345)
T 3fm0_A 83 ATTCIWKKNQDDFECVTTLE-GHEN--EVKSVAWAPSGNLLATCSRD----KSVWVWEVDEE---DEYECVSVLNSHTQD 152 (345)
T ss_dssp SCEEEEEECCC-EEEEEEEC-CCSS--CEEEEEECTTSSEEEEEETT----SCEEEEEECTT---SCEEEEEEECCCCSC
T ss_pred CcEEEEEccCCCeEEEEEcc-CCCC--CceEEEEeCCCCEEEEEECC----CeEEEEECCCC---CCeEEEEEecCcCCC
Confidence 4677888887766544 333 2221 11223322 46666666655 48999999762 345555555433223
Q ss_pred eEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEEE
Q 018497 287 WWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFKC 323 (355)
Q Consensus 287 ~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~~~~ 323 (355)
...+.+..++.+++. ...++ .+..||.+++++..
T Consensus 153 v~~~~~~p~~~~l~s--~s~d~-~i~~w~~~~~~~~~ 186 (345)
T 3fm0_A 153 VKHVVWHPSQELLAS--ASYDD-TVKLYREEEDDWVC 186 (345)
T ss_dssp EEEEEECSSSSCEEE--EETTS-CEEEEEEETTEEEE
T ss_pred eEEEEECCCCCEEEE--EeCCC-cEEEEEecCCCEEE
Confidence 455666677766666 43566 48889988877654
No 119
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=77.98 E-value=31 Score=29.21 Aligned_cols=183 Identities=15% Similarity=0.053 Sum_probs=93.9
Q ss_pred eCceEEEeecCCCCceEEEEcCCcccEEe-cCCCCCCCceeEEEEecCCCCCCcEEEE---------EEcCCCceeEecc
Q 018497 101 CNGVLCFCSNGSDRSLIYLWNPLIKKYMT-LPRPSLNPRYLGFGVNSVSGHLDDFKVV---------YSLRSNSWKNIAY 170 (355)
Q Consensus 101 ~~GLl~l~~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~g~d~~~~~~~~ykvv---------yss~t~~W~~~~~ 170 (355)
-+|.|....+....+.+.+.|+.|++... +|... ...+.|+... .+...+. ||..+. +.+.
T Consensus 30 ~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~---~~fgeGi~~~---g~~lyv~t~~~~~v~viD~~t~--~v~~- 100 (266)
T 2iwa_A 30 ENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDD---SYFGEGLTLL---NEKLYQVVWLKNIGFIYDRRTL--SNIK- 100 (266)
T ss_dssp STTEEEEEECSTTTCEEEEEETTTCCEEEEEECCT---TCCEEEEEEE---TTEEEEEETTCSEEEEEETTTT--EEEE-
T ss_pred CCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCC---CcceEEEEEe---CCEEEEEEecCCEEEEEECCCC--cEEE-
Confidence 34777766532246789999999988764 33222 1222333332 2222222 666654 3333
Q ss_pred CCCceeeeccccccceeEeCceEEEEEeeeccCCCCCCcEEEEEEcCCcee-eEecCCCCCC-CCCCceEEEEECCeEEE
Q 018497 171 GFPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIF-QTVMMPYDLS-TDDADKYLNVFDGYLCV 248 (355)
Q Consensus 171 ~~p~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~-~~i~lP~~~~-~~~~~~~L~~~~G~L~~ 248 (355)
.++.. .. ... ++..+|.-.|++... ..|..+|+++.+- ..|++. ... .....-.+.-.+|+|++
T Consensus 101 ~i~~g-~~-~g~---glt~Dg~~l~vs~gs--------~~l~viD~~t~~v~~~I~Vg-~~~~p~~~~nele~~dg~lyv 166 (266)
T 2iwa_A 101 NFTHQ-MK-DGW---GLATDGKILYGSDGT--------SILYEIDPHTFKLIKKHNVK-YNGHRVIRLNELEYINGEVWA 166 (266)
T ss_dssp EEECC-SS-SCC---EEEECSSSEEEECSS--------SEEEEECTTTCCEEEEEECE-ETTEECCCEEEEEEETTEEEE
T ss_pred EEECC-CC-CeE---EEEECCCEEEEECCC--------CeEEEEECCCCcEEEEEEEC-CCCcccccceeEEEECCEEEE
Confidence 33332 11 112 677777655555433 6899999988554 445543 210 00011123333788876
Q ss_pred EEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCc-----------eeEe--EEEeeCC-cEEEEEEeeCCceEEEEE
Q 018497 249 FATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQR-----------IWWP--LGFTERG-KIFIRGECRHGGYGLLVY 314 (355)
Q Consensus 249 v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~-----------~~~~--~~~~~~g-~i~~~~~~~~~~~~l~~y 314 (355)
.....+ .|.+++- ..+..+.+|+.... ...+ +++..++ .+|+. . ..+.+++..
T Consensus 167 n~~~~~------~V~vID~----~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVT--g-k~~~~v~~i 233 (266)
T 2iwa_A 167 NIWQTD------CIARISA----KDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVT--G-KLWPKLFEI 233 (266)
T ss_dssp EETTSS------EEEEEET----TTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEE--E-TTCSEEEEE
T ss_pred ecCCCC------eEEEEEC----CCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEE--C-CCCCeEEEE
Confidence 553322 4667764 23555666654311 1123 4455555 56666 5 333358887
Q ss_pred eCCCC
Q 018497 315 NPHSD 319 (355)
Q Consensus 315 d~~t~ 319 (355)
++.+.
T Consensus 234 ~l~~~ 238 (266)
T 2iwa_A 234 KLHLV 238 (266)
T ss_dssp EEEEC
T ss_pred EEecc
Confidence 77664
No 120
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=77.53 E-value=13 Score=36.22 Aligned_cols=117 Identities=13% Similarity=0.168 Sum_probs=60.3
Q ss_pred eeEeCceEEEEEeeeccCCCCCCcEEEEEEcCCc--eeeEe-cCCCCCC-----CCCCceEEEEECCeEEEEEecCCCCc
Q 018497 186 SVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKE--IFQTV-MMPYDLS-----TDDADKYLNVFDGYLCVFATIPNNTF 257 (355)
Q Consensus 186 ~v~~~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~--~~~~i-~lP~~~~-----~~~~~~~L~~~~G~L~~v~~~~~~~~ 257 (355)
+++.+|.+|...... .+.++|..+. .|+.- ..+ ... .......++..+|+|++... +
T Consensus 62 P~v~~g~vyv~~~~~---------~v~AlD~~tG~~~W~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~v~~~-d---- 126 (668)
T 1kv9_A 62 PLFHDGVIYTSMSWS---------RVIAVDAASGKELWRYDPEVA-KVKARTSCCDAVNRGVALWGDKVYVGTL-D---- 126 (668)
T ss_dssp CEEETTEEEEEEGGG---------EEEEEETTTCCEEEEECCCCC-GGGGGGCTTCSCCCCCEEEBTEEEEECT-T----
T ss_pred CEEECCEEEEECCCC---------eEEEEECCCChhceEECCCCC-ccccccccccCCccceEEECCEEEEEcC-C----
Confidence 788999999987765 8999998654 56542 222 110 00001123445677766432 2
Q ss_pred cEEEEEEeccCCCCCCeEEEEEecCCCc--eeEeEEEeeCCcEEEEEEeeC-----CceEEEEEeCCCCeEEEE
Q 018497 258 RSYELWVMKEYGLTESWTKLYTIEKPQR--IWWPLGFTERGKIFIRGECRH-----GGYGLLVYNPHSDTFKCI 324 (355)
Q Consensus 258 ~~l~iW~l~~~~~~~~W~~~~~i~~~~~--~~~~~~~~~~g~i~~~~~~~~-----~~~~l~~yd~~t~~~~~v 324 (355)
..+ ..++-...+..|.....-..... ...|+. .+|.||+. ... ++ .++.||.+|++...-
T Consensus 127 g~l--~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v--~~~~v~vg--~~~~~~~~~g-~v~a~D~~tG~~~W~ 193 (668)
T 1kv9_A 127 GRL--IALDAKTGKAIWSQQTTDPAKPYSITGAPRV--VKGKVIIG--NGGAEYGVRG-FVSAYDADTGKLAWR 193 (668)
T ss_dssp SEE--EEEETTTCCEEEEEECSCTTSSCBCCSCCEE--ETTEEEEC--CBCTTTCCBC-EEEEEETTTCCEEEE
T ss_pred CEE--EEEECCCCCEeeeeccCCCCCcceecCCCEE--ECCEEEEe--CCCCCcCCCC-EEEEEECCCCcEEEE
Confidence 233 33332212345665321000000 122332 35666665 311 24 599999999886543
No 121
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=77.51 E-value=33 Score=29.32 Aligned_cols=133 Identities=14% Similarity=0.120 Sum_probs=68.5
Q ss_pred ceEEEEcCCcccEEecCCCCCCCceeEEEEecCCCCCCc--------EEEE-EEcCC---CceeEeccCCCceeeecccc
Q 018497 115 SLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDD--------FKVV-YSLRS---NSWKNIAYGFPRSIEINRSH 182 (355)
Q Consensus 115 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~g~d~~~~~~~~--------ykvv-yss~t---~~W~~~~~~~p~~~~~~~~~ 182 (355)
..++++||.+++...+...... ..++.+++. .+. .+|. |+..+ +..+.+. ..+. ..
T Consensus 165 g~v~~~d~~~~~~~~~~~~~~~--p~gia~~~d---g~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~-~~~g------P~ 232 (322)
T 2fp8_A 165 GRLIKYDPSTKETTLLLKELHV--PGGAEVSAD---SSFVLVAEFLSHQIVKYWLEGPKKGTAEVLV-KIPN------PG 232 (322)
T ss_dssp EEEEEEETTTTEEEEEEEEESC--CCEEEECTT---SSEEEEEEGGGTEEEEEESSSTTTTCEEEEE-ECSS------EE
T ss_pred ceEEEEeCCCCEEEEeccCCcc--CcceEECCC---CCEEEEEeCCCCeEEEEECCCCcCCccceEE-eCCC------CC
Confidence 6788999988876544221111 134555543 221 1222 67664 3444443 2221 11
Q ss_pred ccceeEe--CceEEEEEeeecc--CCCCCCcEEEEEEcCCceeeEecCCCCCCCCCCceEEEEECCeEEEEEecCCCCcc
Q 018497 183 INSSVFL--NGSVHWCARFSCY--HDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVFDGYLCVFATIPNNTFR 258 (355)
Q Consensus 183 ~~~~v~~--~G~lyw~~~~~~~--~~~~~~~~Il~fD~~~~~~~~i~lP~~~~~~~~~~~L~~~~G~L~~v~~~~~~~~~ 258 (355)
++.+ +|.+|........ ........|..||...+....+..| ..........++..+|+|++..... .
T Consensus 233 ---gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~-~g~~~~~~~~~~~~~g~L~v~~~~~----~ 304 (322)
T 2fp8_A 233 ---NIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLP-PPFAGEHFEQIQEHDGLLYIGTLFH----G 304 (322)
T ss_dssp ---EEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECC-TTTTTSCCCEEEEETTEEEEECSSC----S
T ss_pred ---CeEECCCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEECC-CCCccccceEEEEeCCEEEEeecCC----C
Confidence 4443 5776655443000 0000024799999988877888777 5331112233455689998876554 3
Q ss_pred EEEEEEecc
Q 018497 259 SYELWVMKE 267 (355)
Q Consensus 259 ~l~iW~l~~ 267 (355)
.+.+..++.
T Consensus 305 ~i~~~~~~~ 313 (322)
T 2fp8_A 305 SVGILVYDK 313 (322)
T ss_dssp EEEEEEC--
T ss_pred ceEEEeccc
Confidence 666666553
No 122
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=77.15 E-value=57 Score=31.84 Aligned_cols=98 Identities=12% Similarity=0.109 Sum_probs=55.5
Q ss_pred cEEEEEEcCCceeeEe-cCCCCCCCCCCceEEEEE---CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCC
Q 018497 209 WLIVSFDFAKEIFQTV-MMPYDLSTDDADKYLNVF---DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQ 284 (355)
Q Consensus 209 ~~Il~fD~~~~~~~~i-~lP~~~~~~~~~~~L~~~---~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~ 284 (355)
..|..+|+.+.+.... ..+ ... ....+.-. +|.+.++...+ ..+.+|.++. ......+....
T Consensus 163 g~v~vwd~~~~~~~~~~~~~-~~~---~v~~~~~~~~~~~~~l~~~~~d----g~i~~~d~~~------~~~~~~~~~~~ 228 (814)
T 3mkq_A 163 RTVKVWSLGQSTPNFTLTTG-QER---GVNYVDYYPLPDKPYMITASDD----LTIKIWDYQT------KSCVATLEGHM 228 (814)
T ss_dssp SEEEEEETTCSSCSEEEECC-CTT---CCCEEEECCSTTCCEEEEECTT----SEEEEEETTT------TEEEEEEECCS
T ss_pred CeEEEEECCCCcceeEEecC-CCC---CEEEEEEEECCCCCEEEEEeCC----CEEEEEECCC------CcEEEEEcCCC
Confidence 5799999876544322 222 111 11122222 56666666555 4899998764 12334443222
Q ss_pred ceeEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEEE
Q 018497 285 RIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFKC 323 (355)
Q Consensus 285 ~~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~~~~ 323 (355)
.....+.+..+|.+++. ...++ .+.+||+.+.+...
T Consensus 229 ~~v~~~~~~~~~~~l~~--~~~dg-~v~vwd~~~~~~~~ 264 (814)
T 3mkq_A 229 SNVSFAVFHPTLPIIIS--GSEDG-TLKIWNSSTYKVEK 264 (814)
T ss_dssp SCEEEEEECSSSSEEEE--EETTS-CEEEEETTTCSEEE
T ss_pred CCEEEEEEcCCCCEEEE--EeCCC-eEEEEECCCCcEEE
Confidence 13455667778877776 43566 49999999866533
No 123
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=77.04 E-value=62 Score=32.20 Aligned_cols=132 Identities=12% Similarity=0.074 Sum_probs=68.7
Q ss_pred eeEe---CceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEecCCCCCCCCCCceEEEEE--CCeEEEEEecCCCCccEE
Q 018497 186 SVFL---NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF--DGYLCVFATIPNNTFRSY 260 (355)
Q Consensus 186 ~v~~---~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i~lP~~~~~~~~~~~L~~~--~G~L~~v~~~~~~~~~~l 260 (355)
++.+ +|.|||..... ...|..+++....-..+-- .... ....|+.. +|+||++.... .
T Consensus 518 gIaVDp~~g~LYwtD~g~-------~~~I~~~~~dG~~~~~lv~--~~l~--~P~GLavD~~~~~LYwaD~~~----~-- 580 (791)
T 3m0c_C 518 AIVVDPVHGFMYWTDWGT-------PAKIKKGGLNGVDIYSLVT--ENIQ--WPNGITLDLLSGRLYWVDSKL----H-- 580 (791)
T ss_dssp EEEEETTTTEEEEEECSS-------SCEEEEEETTSCCEEEEEC--SSCS--CEEEEEEETTTTEEEEEETTT----T--
T ss_pred eEEEecCCCCEEEecCCC-------CCeEEEEecCCCceEEEEe--CCCC--CceEEEEecCCCeEEEEeCCC----C--
Confidence 4554 58999987542 2579999998765544411 1111 22334444 68999987533 2
Q ss_pred EEEEeccCCCCCCeEEEEEecCCCceeEeEEEee-CCcEEEEEEeeCCceEEEEEeCCCCeEEEEEEecCcceeEEeeee
Q 018497 261 ELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTE-RGKIFIRGECRHGGYGLLVYNPHSDTFKCIGVHLPYYAIQVLNFV 339 (355)
Q Consensus 261 ~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~-~g~i~~~~~~~~~~~~l~~yd~~t~~~~~v~~~~~~~~~~~~~y~ 339 (355)
.|++.+-.+. ...... ........|++++. ++.||+. ..... .|..+|..+++-..+-..+...-+.+.+|.
T Consensus 581 ~I~~~d~dG~-~~~~v~---~~~~~l~~P~glav~~~~lYwt--D~~~~-~I~~~dk~tG~~~~~l~~~l~~P~~i~v~h 653 (791)
T 3m0c_C 581 SISSIDVNGG-NRKTIL---EDEKRLAHPFSLAVFEDKVFWT--DIINE-AIFSANRLTGSDVNLLAENLLSPEDMVLFH 653 (791)
T ss_dssp EEEEEETTSC-SCEEEE---ECTTTTSSEEEEEEETTEEEEE--ETTTT-EEEEEETTTCCCCEEEECSCSCCCCEEEES
T ss_pred cEEEEecCCC-ceEEEe---cCCCccCCCCEEEEeCCEEEEE--ECCCC-EEEEEeCCCCcceEEeecCCCCceeEeeec
Confidence 3566654332 222222 11111234555543 4478887 52334 699999877754333233222223344454
Q ss_pred cc
Q 018497 340 ES 341 (355)
Q Consensus 340 ~S 341 (355)
+.
T Consensus 654 ~~ 655 (791)
T 3m0c_C 654 NL 655 (791)
T ss_dssp GG
T ss_pred cc
Confidence 43
No 124
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=76.18 E-value=26 Score=29.94 Aligned_cols=70 Identities=9% Similarity=0.094 Sum_probs=43.9
Q ss_pred CeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEEE
Q 018497 244 GYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFKC 323 (355)
Q Consensus 244 G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~~~~ 323 (355)
|.+.+++..+ ..+.||.++.. .......+.........+.+..++..++. ...++ .+.+||+++++...
T Consensus 54 g~~l~~~~~d----g~i~iw~~~~~----~~~~~~~~~~h~~~v~~~~~~~~~~~l~s--~~~dg-~v~iwd~~~~~~~~ 122 (368)
T 3mmy_A 54 GNFLIAGSWA----NDVRCWEVQDS----GQTIPKAQQMHTGPVLDVCWSDDGSKVFT--ASCDK-TAKMWDLSSNQAIQ 122 (368)
T ss_dssp SEEEEEEETT----SEEEEEEECTT----SCEEEEEEEECSSCEEEEEECTTSSEEEE--EETTS-EEEEEETTTTEEEE
T ss_pred ceEEEEECCC----CcEEEEEcCCC----CceeEEEeccccCCEEEEEECcCCCEEEE--EcCCC-cEEEEEcCCCCcee
Confidence 4666666655 48999999852 12332333222213455666777776666 43667 59999999998766
Q ss_pred E
Q 018497 324 I 324 (355)
Q Consensus 324 v 324 (355)
+
T Consensus 123 ~ 123 (368)
T 3mmy_A 123 I 123 (368)
T ss_dssp E
T ss_pred e
Confidence 4
No 125
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=75.75 E-value=67 Score=31.95 Aligned_cols=110 Identities=13% Similarity=0.113 Sum_probs=61.3
Q ss_pred CceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEecCCCCCCCCCCceEEEE--ECCeEEEEEecCCCCccEEEEEEecc
Q 018497 190 NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNV--FDGYLCVFATIPNNTFRSYELWVMKE 267 (355)
Q Consensus 190 ~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i~lP~~~~~~~~~~~L~~--~~G~L~~v~~~~~~~~~~l~iW~l~~ 267 (355)
+|.|||..... ..|.++|+.......+-.. ... ....|++ .+|.||+...... -.|++..-
T Consensus 482 ~~~LY~tD~~~--------~~I~v~~ldG~~~~~l~~~--~l~--~P~gIaVDp~~g~LYwtD~g~~-----~~I~~~~~ 544 (791)
T 3m0c_C 482 HSNIYWTDSVL--------GTVSVADTKGVKRKTLFRE--NGS--KPRAIVVDPVHGFMYWTDWGTP-----AKIKKGGL 544 (791)
T ss_dssp TTEEEEEETTT--------TEEEEEETTSSSEEEEEEC--TTC--CEEEEEEETTTTEEEEEECSSS-----CEEEEEET
T ss_pred CCcEEEEecCC--------CeEEEEeCCCCeEEEEEeC--CCC--CcceEEEecCCCCEEEecCCCC-----CeEEEEec
Confidence 57999997655 6899999987665544211 111 1223444 3588988775332 23556554
Q ss_pred CCCCCCeEEEEEecCCCceeEeEEEe---eCCcEEEEEEeeCCceEEEEEeCCCCeEEEEE
Q 018497 268 YGLTESWTKLYTIEKPQRIWWPLGFT---ERGKIFIRGECRHGGYGLLVYNPHSDTFKCIG 325 (355)
Q Consensus 268 ~~~~~~W~~~~~i~~~~~~~~~~~~~---~~g~i~~~~~~~~~~~~l~~yd~~t~~~~~v~ 325 (355)
.+.. .+ ..+. .. ...|.+++ .++.||+. ..... .|..+|++....+.+-
T Consensus 545 dG~~---~~-~lv~-~~-l~~P~GLavD~~~~~LYwa--D~~~~-~I~~~d~dG~~~~~v~ 596 (791)
T 3m0c_C 545 NGVD---IY-SLVT-EN-IQWPNGITLDLLSGRLYWV--DSKLH-SISSIDVNGGNRKTIL 596 (791)
T ss_dssp TSCC---EE-EEEC-SS-CSCEEEEEEETTTTEEEEE--ETTTT-EEEEEETTSCSCEEEE
T ss_pred CCCc---eE-EEEe-CC-CCCceEEEEecCCCeEEEE--eCCCC-cEEEEecCCCceEEEe
Confidence 3321 11 1111 11 13354444 34578887 52334 5889999887766654
No 126
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=75.64 E-value=39 Score=30.06 Aligned_cols=88 Identities=14% Similarity=0.215 Sum_probs=52.6
Q ss_pred eEecCCCCCCCCCCceEEEEEC-CeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEeEEEeeCCcEEE
Q 018497 222 QTVMMPYDLSTDDADKYLNVFD-GYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFI 300 (355)
Q Consensus 222 ~~i~lP~~~~~~~~~~~L~~~~-G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~ 300 (355)
+.+..| ...++ +...++... +.+..++. + .++.||-.+. .+-.+...+......+..+++..+|..++
T Consensus 95 ~~l~ap-~~~~d-~y~~~l~wS~~n~lAvgl-d----~tV~lWd~~t----g~~~~~~~~~~~~~~V~sv~fspdg~~la 163 (420)
T 4gga_A 95 RILDAP-EIRND-YYLNLVDWSSGNVLAVAL-D----NSVYLWSASS----GDILQLLQMEQPGEYISSVAWIKEGNYLA 163 (420)
T ss_dssp EEEECT-TCCCC-TTCBCEEECTTSEEEEEE-T----TEEEEEETTT----CCEEEEEECCSTTCCEEEEEECTTSSEEE
T ss_pred eEEECC-CCccc-ccceeEEECCCCEEEEEe-C----CEEEEEECCC----CCEEEEEEecCCCCcEEEEEECCCCCEEE
Confidence 444666 44433 444444443 44444444 3 4999998764 33344444433222466677888888777
Q ss_pred EEEeeCCceEEEEEeCCCCeEEE
Q 018497 301 RGECRHGGYGLLVYNPHSDTFKC 323 (355)
Q Consensus 301 ~~~~~~~~~~l~~yd~~t~~~~~ 323 (355)
. ...++ .+.+||+++++...
T Consensus 164 s--gs~Dg-~v~iWd~~~~~~~~ 183 (420)
T 4gga_A 164 V--GTSSA-EVQLWDVQQQKRLR 183 (420)
T ss_dssp E--EETTS-CEEEEETTTTEEEE
T ss_pred E--EECCC-eEEEEEcCCCcEEE
Confidence 7 43677 49999999987644
No 127
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=74.90 E-value=38 Score=28.77 Aligned_cols=97 Identities=6% Similarity=-0.006 Sum_probs=51.0
Q ss_pred cEEEEEEcCCce--eeEecCCCCCCCCCCceEEE-----EECCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEec
Q 018497 209 WLIVSFDFAKEI--FQTVMMPYDLSTDDADKYLN-----VFDGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIE 281 (355)
Q Consensus 209 ~~Il~fD~~~~~--~~~i~lP~~~~~~~~~~~L~-----~~~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~ 281 (355)
..|..+|+.+.. ...+..+ ..........+. ..+|.+.++...+ ..+.+|.++.. .......
T Consensus 139 ~~i~vwd~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d----~~i~i~d~~~~------~~~~~~~ 207 (357)
T 3i2n_A 139 GTVKVWDPRQKDDPVANMEPV-QGENKRDCWTVAFGNAYNQEERVVCAGYDN----GDIKLFDLRNM------ALRWETN 207 (357)
T ss_dssp SCEEEECTTSCSSCSEEECCC-TTSCCCCEEEEEEECCCC-CCCEEEEEETT----SEEEEEETTTT------EEEEEEE
T ss_pred CeEEEEeCCCCCCcceecccc-CCCCCCceEEEEEEeccCCCCCEEEEEccC----CeEEEEECccC------ceeeecC
Confidence 478999998765 4444433 221111111222 1457776666655 48999988752 1122222
Q ss_pred CCCceeEeEEEee---CCcEEEEEEeeCCceEEEEEeCCCCe
Q 018497 282 KPQRIWWPLGFTE---RGKIFIRGECRHGGYGLLVYNPHSDT 320 (355)
Q Consensus 282 ~~~~~~~~~~~~~---~g~i~~~~~~~~~~~~l~~yd~~t~~ 320 (355)
... ....+.+.. ++..++. ...++ .+..||+++++
T Consensus 208 ~~~-~v~~~~~~~~~~~~~~l~~--~~~dg-~i~i~d~~~~~ 245 (357)
T 3i2n_A 208 IKN-GVCSLEFDRKDISMNKLVA--TSLEG-KFHVFDMRTQH 245 (357)
T ss_dssp CSS-CEEEEEESCSSSSCCEEEE--EESTT-EEEEEEEEEEE
T ss_pred CCC-ceEEEEcCCCCCCCCEEEE--ECCCC-eEEEEeCcCCC
Confidence 222 244455555 5656665 32566 48888876543
No 128
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=74.60 E-value=20 Score=30.46 Aligned_cols=112 Identities=9% Similarity=0.005 Sum_probs=59.1
Q ss_pred Cce-EEEEEeeeccCCCCCCcEEEEEEcCCceeeEecCCCCCCCCCCceEEEE-ECCeEEEEEecCCCCccEEEEEEecc
Q 018497 190 NGS-VHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNV-FDGYLCVFATIPNNTFRSYELWVMKE 267 (355)
Q Consensus 190 ~G~-lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i~lP~~~~~~~~~~~L~~-~~G~L~~v~~~~~~~~~~l~iW~l~~ 267 (355)
+|. |||..... ..|..+|.. +..+.+..| ... ...+.. -+|+|+++.... ..+.+|..+
T Consensus 55 ~g~~l~~~d~~~--------~~i~~~~~~-g~~~~~~~~-~~~----~~gl~~d~dG~l~v~~~~~----~~v~~~~~~- 115 (305)
T 3dr2_A 55 AQRTLVWSDLVG--------RRVLGWRED-GTVDVLLDA-TAF----TNGNAVDAQQRLVHCEHGR----RAITRSDAD- 115 (305)
T ss_dssp GGTEEEEEETTT--------TEEEEEETT-SCEEEEEES-CSC----EEEEEECTTSCEEEEETTT----TEEEEECTT-
T ss_pred CCCEEEEEECCC--------CEEEEEeCC-CCEEEEeCC-CCc----cceeeECCCCCEEEEECCC----CEEEEECCC-
Confidence 454 99987654 689999984 455555444 221 122333 358877665433 245444332
Q ss_pred CCCCCCeEEEEEe-cCCCc-eeEeEEEeeCCcEEEE----EEee-----------CCceEEEEEeCCCCeEEEEE
Q 018497 268 YGLTESWTKLYTI-EKPQR-IWWPLGFTERGKIFIR----GECR-----------HGGYGLLVYNPHSDTFKCIG 325 (355)
Q Consensus 268 ~~~~~~W~~~~~i-~~~~~-~~~~~~~~~~g~i~~~----~~~~-----------~~~~~l~~yd~~t~~~~~v~ 325 (355)
.+....... ..... ...-+.+..+|.|++. +... ... .|+.||+++++++.+.
T Consensus 116 ----g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~-~v~~~d~~~g~~~~~~ 185 (305)
T 3dr2_A 116 ----GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHH-SVYRLPPDGSPLQRMA 185 (305)
T ss_dssp ----SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCE-EEEEECSSSCCCEEEE
T ss_pred ----CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCC-eEEEEcCCCCcEEEEe
Confidence 223322111 11000 1223666778899985 1000 013 5999999888877653
No 129
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=74.36 E-value=41 Score=28.88 Aligned_cols=106 Identities=12% Similarity=0.125 Sum_probs=59.5
Q ss_pred CceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEecCCCCCCCCCCceEEE-EECCeEEEEEecCCCCccEEEEEEeccC
Q 018497 190 NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLN-VFDGYLCVFATIPNNTFRSYELWVMKEY 268 (355)
Q Consensus 190 ~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i~lP~~~~~~~~~~~L~-~~~G~L~~v~~~~~~~~~~l~iW~l~~~ 268 (355)
+|.+||..... ..|..+|+.+++...+..| ... ..++ .-+|++.+.. . .. |+.++..
T Consensus 60 ~~~l~~~d~~~--------~~i~~~d~~~~~~~~~~~~-~~v-----~~i~~~~dg~l~v~~--~----~g--l~~~d~~ 117 (326)
T 2ghs_A 60 SGTAWWFNILE--------RELHELHLASGRKTVHALP-FMG-----SALAKISDSKQLIAS--D----DG--LFLRDTA 117 (326)
T ss_dssp TTEEEEEEGGG--------TEEEEEETTTTEEEEEECS-SCE-----EEEEEEETTEEEEEE--T----TE--EEEEETT
T ss_pred CCEEEEEECCC--------CEEEEEECCCCcEEEEECC-Ccc-----eEEEEeCCCeEEEEE--C----CC--EEEEECC
Confidence 37899997655 5899999999888777665 321 2233 3468877754 2 24 4444421
Q ss_pred CCCCCeEEEEEecCC-Cc-eeEeEEEeeCCcEEEEEEeeC------CceEEEEEeCCCCeEEEE
Q 018497 269 GLTESWTKLYTIEKP-QR-IWWPLGFTERGKIFIRGECRH------GGYGLLVYNPHSDTFKCI 324 (355)
Q Consensus 269 ~~~~~W~~~~~i~~~-~~-~~~~~~~~~~g~i~~~~~~~~------~~~~l~~yd~~t~~~~~v 324 (355)
..+.......... .. ...-+.+..+|.+++. ... .+ .|+.+| +++++.+
T Consensus 118 --~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~--~~~~~~~~~~~-~l~~~~--~g~~~~~ 174 (326)
T 2ghs_A 118 --TGVLTLHAELESDLPGNRSNDGRMHPSGALWIG--TMGRKAETGAG-SIYHVA--KGKVTKL 174 (326)
T ss_dssp --TCCEEEEECSSTTCTTEEEEEEEECTTSCEEEE--EEETTCCTTCE-EEEEEE--TTEEEEE
T ss_pred --CCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEE--eCCCcCCCCce-EEEEEe--CCcEEEe
Confidence 1334333222111 11 2334556677888776 311 13 588888 5666554
No 130
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=74.23 E-value=16 Score=32.89 Aligned_cols=101 Identities=9% Similarity=0.053 Sum_probs=53.3
Q ss_pred cEEEEEEcCCceeeE-ecCCCCCCCCCCceEEEE--ECCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCc
Q 018497 209 WLIVSFDFAKEIFQT-VMMPYDLSTDDADKYLNV--FDGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQR 285 (355)
Q Consensus 209 ~~Il~fD~~~~~~~~-i~lP~~~~~~~~~~~L~~--~~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~ 285 (355)
..|..+|+.+..-.. +.+. .+.. .-..|.- .+|.+.+.+..+ ..+.||-++. ..-.....-.....
T Consensus 142 g~i~lWd~~~~~~~~~~~~~-gH~~--~V~~l~f~p~~~~~l~s~s~D----~~v~iwd~~~----~~~~~~~~~~~~~~ 210 (435)
T 4e54_B 142 GDIMLWNFGIKDKPTFIKGI-GAGG--SITGLKFNPLNTNQFYASSME----GTTRLQDFKG----NILRVFASSDTINI 210 (435)
T ss_dssp SCEEEECSSCCSCCEEECCC-SSSC--CCCEEEECSSCTTEEEEECSS----SCEEEEETTS----CEEEEEECCSSCSC
T ss_pred CEEEEEECCCCCceeEEEcc-CCCC--CEEEEEEeCCCCCEEEEEeCC----CEEEEeeccC----CceeEEeccCCCCc
Confidence 468888887665433 3332 2221 1123332 356666655555 4899998753 11111111111111
Q ss_pred eeEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEEE
Q 018497 286 IWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFKC 323 (355)
Q Consensus 286 ~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~~~~ 323 (355)
....+.+..+|.+++. ...++ .+..||++++.+..
T Consensus 211 ~~~~~~~~~~~~~l~~--g~~dg-~i~~wd~~~~~~~~ 245 (435)
T 4e54_B 211 WFCSLDVSASSRMVVT--GDNVG-NVILLNMDGKELWN 245 (435)
T ss_dssp CCCCEEEETTTTEEEE--ECSSS-BEEEEESSSCBCCC
T ss_pred cEEEEEECCCCCEEEE--EeCCC-cEeeeccCcceeEE
Confidence 2334666677877777 43566 48999988765543
No 131
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=74.16 E-value=41 Score=28.78 Aligned_cols=107 Identities=9% Similarity=0.089 Sum_probs=57.7
Q ss_pred cEEEEEEcCCceeeEe-cCCCCCCCCCCceEEEEECC--eEEEEEecCCCCccEEEEEEeccCC--CCCCeEEEEEecCC
Q 018497 209 WLIVSFDFAKEIFQTV-MMPYDLSTDDADKYLNVFDG--YLCVFATIPNNTFRSYELWVMKEYG--LTESWTKLYTIEKP 283 (355)
Q Consensus 209 ~~Il~fD~~~~~~~~i-~lP~~~~~~~~~~~L~~~~G--~L~~v~~~~~~~~~~l~iW~l~~~~--~~~~W~~~~~i~~~ 283 (355)
..|..+|..++.+..+ .+. .... ....+.-... ...++....+ ..+.||.+.... ....|.....+...
T Consensus 175 ~~i~iW~~~~~~~~~~~~~~-~h~~--~v~~~~~~~~~~~~~l~s~s~D---~~v~iw~~~~~~~~~~~~~~~~~~~~~~ 248 (330)
T 2hes_X 175 DTVRIWKDYDDDWECVAVLN-GHEG--TVWSSDFDKTEGVFRLCSGSDD---STVRVWKYMGDDEDDQQEWVCEAILPDV 248 (330)
T ss_dssp SCEEEEEEETTEEEEEEEEC-CCSS--CEEEEEECCSSSSCEEEEEETT---SCEEEEEEEEECTTSCEEEEEEEECCSC
T ss_pred CeEEEEECCCCCeeEEEEcc-CCCC--cEEEEEecCCCCeeEEEEEeCC---CeEEEEEecCCCccccceeEEeeecccc
Confidence 4677888877766544 232 2221 1112222221 2334443333 599999986431 23457766666532
Q ss_pred Cc-eeEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEEEEE
Q 018497 284 QR-IWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFKCIG 325 (355)
Q Consensus 284 ~~-~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~~~~v~ 325 (355)
+. ....+++..++.|+.. . .++ .+.+||..+++++.+.
T Consensus 249 h~~~v~~v~~s~~~~l~s~--~-~dg-~v~iw~~~~~~~~~~~ 287 (330)
T 2hes_X 249 HKRQVYNVAWGFNGLIASV--G-ADG-VLAVYEEVDGEWKVFA 287 (330)
T ss_dssp CSSCEEEEEECTTSCEEEE--E-TTS-CEEEEEEETTEEEEEE
T ss_pred cccceEEEEEcCCCEEEEE--e-CCC-EEEEEEcCCCceEEEe
Confidence 21 3444555544444444 4 677 4999999988776553
No 132
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=74.15 E-value=39 Score=28.56 Aligned_cols=103 Identities=10% Similarity=-0.011 Sum_probs=56.7
Q ss_pred cEEEEEEcCC-ce--eeEecCCCCCCCCCCceEEEEE--CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCC
Q 018497 209 WLIVSFDFAK-EI--FQTVMMPYDLSTDDADKYLNVF--DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKP 283 (355)
Q Consensus 209 ~~Il~fD~~~-~~--~~~i~lP~~~~~~~~~~~L~~~--~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~ 283 (355)
..|..||+.+ .. ......+ ... ....+.-. +|++.++...+ ..+.||.++..+.+........+...
T Consensus 170 ~~i~i~d~~~~~~~~~~~~~~~-~~~---~i~~i~~~~~~~~~l~~~~~d----g~i~i~~~~~~~~~~~~~~~~~~~~~ 241 (342)
T 1yfq_A 170 SQVQWFRLPLCEDDNGTIEESG-LKY---QIRDVALLPKEQEGYACSSID----GRVAVEFFDDQGDDYNSSKRFAFRCH 241 (342)
T ss_dssp TEEEEEESSCCTTCCCEEEECS-CSS---CEEEEEECSGGGCEEEEEETT----SEEEEEECCTTCCSTTCTTCEEEECC
T ss_pred CeEEEEECCccccccceeeecC-CCC---ceeEEEECCCCCCEEEEEecC----CcEEEEEEcCCCcccccccceeeecc
Confidence 5899999987 33 3333322 111 12233433 46776666665 49999999764111111122222221
Q ss_pred Cc---------eeEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEE
Q 018497 284 QR---------IWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFK 322 (355)
Q Consensus 284 ~~---------~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~~~ 322 (355)
.. ....+.+..+|..++. ...++ .+.+||+++++..
T Consensus 242 ~~~~~~~~~~~~i~~~~~s~~~~~l~~--~~~dg-~i~vwd~~~~~~~ 286 (342)
T 1yfq_A 242 RLNLKDTNLAYPVNSIEFSPRHKFLYT--AGSDG-IISCWNLQTRKKI 286 (342)
T ss_dssp CCCTTCCSSCCCEEEEEECTTTCCEEE--EETTS-CEEEEETTTTEEE
T ss_pred cccccccccceeEEEEEEcCCCCEEEE--ecCCc-eEEEEcCccHhHh
Confidence 10 2445666677766666 43566 4999999988753
No 133
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=73.63 E-value=39 Score=28.21 Aligned_cols=44 Identities=16% Similarity=0.185 Sum_probs=26.4
Q ss_pred eeCceEEEeecCCCCceEEEEcCCcccEEecCCCCCCCc-eeEEEEecC
Q 018497 100 SCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPR-YLGFGVNSV 147 (355)
Q Consensus 100 s~~GLl~l~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~-~~~~g~d~~ 147 (355)
|.+|+|.... ++.+.|||..|++...+-....... ...+.+.+.
T Consensus 34 S~~~~lAvg~----D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~ 78 (318)
T 4ggc_A 34 SSGNVLAVAL----DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKE 78 (318)
T ss_dssp CTTSEEEEEE----TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTT
T ss_pred CCCCEEEEEe----CCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCC
Confidence 4567654433 5789999999998776543332222 245555553
No 134
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=73.56 E-value=73 Score=31.36 Aligned_cols=179 Identities=12% Similarity=0.130 Sum_probs=88.0
Q ss_pred ceEEEEcCCcccEEecCCCCCCCceeEEEEecCCCCCCcE-------EEE-EEcCCCceeEeccCCC---ceeeeccccc
Q 018497 115 SLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDF-------KVV-YSLRSNSWKNIAYGFP---RSIEINRSHI 183 (355)
Q Consensus 115 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~g~d~~~~~~~~y-------kvv-yss~t~~W~~~~~~~p---~~~~~~~~~~ 183 (355)
..++.+||.++++..++..+.......+..|+. . .+ .+. |+..+++++... ..+ .......-.
T Consensus 193 ~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~---g-~lwigt~~~Gl~~~~~~~~~~~~~~-~~~~~~~~l~~~~i~- 266 (795)
T 4a2l_A 193 DGLYTYSITQKTFEKVIPILGTKQIQAILQQSP---T-RIWVATEGAGLFLINPKTKEIKNYL-HSPSNPKSISSNYIR- 266 (795)
T ss_dssp SCEEEEETTTCCEEECC----CCCEEEEEEEET---T-EEEEEEBSSCEEEEETTTTEEEEEC-CCTTCTTSCSCSBEE-
T ss_pred CCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCC---C-CEEEEECCCCeEEEeCCCCeEEEee-cCCCCccccCCCeEE-
Confidence 457888998888877643222211123333332 1 11 111 788888887665 221 111111111
Q ss_pred cceeEe--CceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEecCCCC---CCCCCCceEEEEE-CCeEEEEEecCCCCc
Q 018497 184 NSSVFL--NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYD---LSTDDADKYLNVF-DGYLCVFATIPNNTF 257 (355)
Q Consensus 184 ~~~v~~--~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i~lP~~---~~~~~~~~~L~~~-~G~L~~v~~~~~~~~ 257 (355)
.++. +|. .|++... .|..||..+.++..+..... .........+.+- +|.|.+.....
T Consensus 267 --~i~~d~~g~-lWigt~~---------Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWigt~~~---- 330 (795)
T 4a2l_A 267 --SLAMDSQNR-LWIGTFN---------DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGMWLGTYFG---- 330 (795)
T ss_dssp --EEEECTTSC-EEEEESS---------CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSCEEEEESSS----
T ss_pred --EEEEcCCCC-EEEEeCC---------hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEEEEECCC----
Confidence 3333 444 5665443 68999999999988732201 1112222334433 37777655332
Q ss_pred cEEEEEEeccCCCCCCeEEEEEecC----CCceeEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEEEE
Q 018497 258 RSYELWVMKEYGLTESWTKLYTIEK----PQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFKCI 324 (355)
Q Consensus 258 ~~l~iW~l~~~~~~~~W~~~~~i~~----~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~~~~v 324 (355)
.+..+..+. ..+......+. .......+....+|.|.+. . .++. |..||.++++++..
T Consensus 331 -Gl~~~~~~~----~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lWiG--t-~~~G-l~~~~~~~~~~~~~ 392 (795)
T 4a2l_A 331 -GLNYYHPIR----NRFKNIRNIPYKNSLSDNVVSCIVEDKDKNLWIG--T-NDGG-LNLYNPITQRFTSY 392 (795)
T ss_dssp -CEEEECGGG----GSSEEECCCTTSSSCSCSSEEEEEECTTSCEEEE--E-SSSC-EEEECTTTCCEEEE
T ss_pred -CeEEeCCCc----ccceEEcCCCCCCCCCCCeeEEEEECCCCCEEEE--E-CCCC-eEEEcCCCCcEEEE
Confidence 333332221 22333221111 1112344555556778877 5 4443 89999998887765
No 135
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=73.37 E-value=14 Score=36.02 Aligned_cols=117 Identities=16% Similarity=0.142 Sum_probs=60.4
Q ss_pred eeEeCceEEEEEeeeccCCCCCCcEEEEEEcCCc--eeeEe-cCCCCC-----CCCCCceEEEEECCeEEEEEecCCCCc
Q 018497 186 SVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKE--IFQTV-MMPYDL-----STDDADKYLNVFDGYLCVFATIPNNTF 257 (355)
Q Consensus 186 ~v~~~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~--~~~~i-~lP~~~-----~~~~~~~~L~~~~G~L~~v~~~~~~~~ 257 (355)
+++.+|.+|...... .|.++|..+. .|+.- ..+ .. ..+.....++..+|+|++...+
T Consensus 73 P~v~~g~vyv~~~~~---------~v~AlD~~tG~~~W~~~~~~~-~~~~~~~~~~~~~~~~a~~~~~v~v~~~d----- 137 (677)
T 1kb0_A 73 PVVVDGIMYVSASWS---------VVHAIDTRTGNRIWTYDPQID-RSTGFKGCCDVVNRGVALWKGKVYVGAWD----- 137 (677)
T ss_dssp CEEETTEEEEECGGG---------CEEEEETTTTEEEEEECCCCC-GGGGGGSSSCSCCCCCEEETTEEEEECTT-----
T ss_pred CEEECCEEEEECCCC---------eEEEEECCCCcEEEEEcCCCC-ccccccccccCCCCCceEECCEEEEEcCC-----
Confidence 788999999987654 7999998765 45542 211 10 0000112244566777665322
Q ss_pred cEEEEEEeccCCCCCCeEEEEEecCC---CceeEeEEEeeCCcEEEEEEeeC-----CceEEEEEeCCCCeEEEE
Q 018497 258 RSYELWVMKEYGLTESWTKLYTIEKP---QRIWWPLGFTERGKIFIRGECRH-----GGYGLLVYNPHSDTFKCI 324 (355)
Q Consensus 258 ~~l~iW~l~~~~~~~~W~~~~~i~~~---~~~~~~~~~~~~g~i~~~~~~~~-----~~~~l~~yd~~t~~~~~v 324 (355)
..+. .++-...+..|......+.. .....|+. .++.||+. ... ++ .|+.||.+|++...-
T Consensus 138 g~l~--alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v--~~~~v~v~--~~~~~~~~~g-~v~a~D~~tG~~~W~ 205 (677)
T 1kb0_A 138 GRLI--ALDAATGKEVWHQNTFEGQKGSLTITGAPRV--FKGKVIIG--NGGAEYGVRG-YITAYDAETGERKWR 205 (677)
T ss_dssp SEEE--EEETTTCCEEEEEETTTTCCSSCBCCSCCEE--ETTEEEEC--CBCTTTCCBC-EEEEEETTTCCEEEE
T ss_pred CEEE--EEECCCCCEEeeecCCcCcCcCcccccCcEE--ECCEEEEE--ecccccCCCC-EEEEEECCCCcEEEE
Confidence 2333 33322123456553110100 00122332 35666665 311 34 599999999886543
No 136
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=73.19 E-value=48 Score=29.12 Aligned_cols=98 Identities=12% Similarity=0.133 Sum_probs=56.3
Q ss_pred cEEEEEEcCCceeeEecCCCCCCCCCCceEEEEE-CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCcee
Q 018497 209 WLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF-DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIW 287 (355)
Q Consensus 209 ~~Il~fD~~~~~~~~i~lP~~~~~~~~~~~L~~~-~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~ 287 (355)
..|..+|+.+++...+. . .... ....+.-. +|++.+....+ ..+.+|.++... . ...+.......
T Consensus 119 g~i~iwd~~~~~~~~~~-~-~h~~--~v~~~~~~~~~~~l~s~s~d----~~i~iwd~~~~~--~----~~~~~~h~~~v 184 (420)
T 3vl1_A 119 GDIKVLDSNFNLQREID-Q-AHVS--EITKLKFFPSGEALISSSQD----MQLKIWSVKDGS--N----PRTLIGHRATV 184 (420)
T ss_dssp SCEEEECTTSCEEEEET-T-SSSS--CEEEEEECTTSSEEEEEETT----SEEEEEETTTCC--C----CEEEECCSSCE
T ss_pred CCEEEEeCCCcceeeec-c-cccC--ccEEEEECCCCCEEEEEeCC----CeEEEEeCCCCc--C----ceEEcCCCCcE
Confidence 46888888877665441 1 1111 12223333 46666666555 499999987521 1 12222111134
Q ss_pred EeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEEE
Q 018497 288 WPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFKC 323 (355)
Q Consensus 288 ~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~~~~ 323 (355)
..+.+..+|..++. ...++ .+..||+++++...
T Consensus 185 ~~~~~~~~~~~l~s--~~~d~-~v~iwd~~~~~~~~ 217 (420)
T 3vl1_A 185 TDIAIIDRGRNVLS--ASLDG-TIRLWECGTGTTIH 217 (420)
T ss_dssp EEEEEETTTTEEEE--EETTS-CEEEEETTTTEEEE
T ss_pred EEEEEcCCCCEEEE--EcCCC-cEEEeECCCCceeE
Confidence 55666777876666 43667 49999999887544
No 137
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=72.85 E-value=47 Score=28.83 Aligned_cols=101 Identities=7% Similarity=-0.074 Sum_probs=52.2
Q ss_pred cEEEEEEcCCceeeEecCC-C-CCCCCCCceEEEEECCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCce
Q 018497 209 WLIVSFDFAKEIFQTVMMP-Y-DLSTDDADKYLNVFDGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRI 286 (355)
Q Consensus 209 ~~Il~fD~~~~~~~~i~lP-~-~~~~~~~~~~L~~~~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~ 286 (355)
..|..+|+.+.+-...... . ...............+...++...+ ..+.+|.+.. ...+..+......
T Consensus 267 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~i~v~d~~~------~~~~~~~~~~~~~ 336 (408)
T 4a11_B 267 NRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYG----STIAVYTVYS------GEQITMLKGHYKT 336 (408)
T ss_dssp SCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEET----TEEEEEETTT------CCEEEEECCCSSC
T ss_pred CeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecC----CEEEEEECcC------CcceeeeccCCCe
Confidence 4799999987664332111 0 0011111222222223333334444 4889998764 2334444322223
Q ss_pred eEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEE
Q 018497 287 WWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFK 322 (355)
Q Consensus 287 ~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~~~ 322 (355)
...+++..+|..++. ...++ .+.+||+++.+..
T Consensus 337 v~~~~~s~~~~~l~s--~~~dg-~i~iw~~~~~~~~ 369 (408)
T 4a11_B 337 VDCCVFQSNFQELYS--GSRDC-NILAWVPSLYEPV 369 (408)
T ss_dssp EEEEEEETTTTEEEE--EETTS-CEEEEEECC----
T ss_pred EEEEEEcCCCCEEEE--ECCCC-eEEEEeCCCCCcc
Confidence 555777788877777 43677 4999999987653
No 138
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=72.44 E-value=46 Score=28.58 Aligned_cols=96 Identities=16% Similarity=0.104 Sum_probs=56.4
Q ss_pred cEEEEEEcCCceeeEecCCCCCCCCCCceEEEEE-CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCcee
Q 018497 209 WLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF-DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIW 287 (355)
Q Consensus 209 ~~Il~fD~~~~~~~~i~lP~~~~~~~~~~~L~~~-~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~ 287 (355)
..|..+|+.+.+.... +. .... ....+.-. +|++.+.+..+ ..+.+|-+... .....+.......
T Consensus 164 ~~i~~wd~~~~~~~~~-~~-~h~~--~v~~~~~~~~~~~l~sg~~d----~~v~~wd~~~~------~~~~~~~~h~~~v 229 (340)
T 1got_B 164 TTCALWDIETGQQTTT-FT-GHTG--DVMSLSLAPDTRLFVSGACD----ASAKLWDVREG------MCRQTFTGHESDI 229 (340)
T ss_dssp SCEEEEETTTTEEEEE-EC-CCSS--CEEEEEECTTSSEEEEEETT----SCEEEEETTTC------SEEEEECCCSSCE
T ss_pred CcEEEEECCCCcEEEE-Ec-CCCC--ceEEEEECCCCCEEEEEeCC----CcEEEEECCCC------eeEEEEcCCcCCE
Confidence 4788999988765332 11 1111 12233333 46776666655 48999987641 2233333222235
Q ss_pred EeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeE
Q 018497 288 WPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTF 321 (355)
Q Consensus 288 ~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~~ 321 (355)
..+++..+|..++. ...++ .+.+||+++++.
T Consensus 230 ~~v~~~p~~~~l~s--~s~d~-~v~iwd~~~~~~ 260 (340)
T 1got_B 230 NAICFFPNGNAFAT--GSDDA-TCRLFDLRADQE 260 (340)
T ss_dssp EEEEECTTSSEEEE--EETTS-CEEEEETTTTEE
T ss_pred EEEEEcCCCCEEEE--EcCCC-cEEEEECCCCcE
Confidence 55677778877777 43666 499999988764
No 139
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=72.29 E-value=49 Score=28.79 Aligned_cols=92 Identities=5% Similarity=-0.100 Sum_probs=49.4
Q ss_pred cEEEEEEcCCceee-EecCCCCCCCCCCceEEEEE-CC-eEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCc
Q 018497 209 WLIVSFDFAKEIFQ-TVMMPYDLSTDDADKYLNVF-DG-YLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQR 285 (355)
Q Consensus 209 ~~Il~fD~~~~~~~-~i~lP~~~~~~~~~~~L~~~-~G-~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~ 285 (355)
..|..+|+.+.+-. .+... .. ....+.-. +| ++.+.+..+ ..+.||-++. . .....+....
T Consensus 249 ~~i~~wd~~~~~~~~~~~~~-~~----~v~~l~~sp~~~~~lasgs~D----~~i~iwd~~~----~--~~~~~~~H~~- 312 (357)
T 4g56_B 249 GNVSLVNIKNPDSAQTSAVH-SQ----NITGLAYSYHSSPFLASISED----CTVAVLDADF----S--EVFRDLSHRD- 312 (357)
T ss_dssp SCEEEEESSCGGGCEEECCC-SS----CEEEEEECSSSSCCEEEEETT----SCEEEECTTS----C--EEEEECCCSS-
T ss_pred cceeEEECCCCcEeEEEecc-ce----eEEEEEEcCCCCCEEEEEeCC----CEEEEEECCC----C--cEeEECCCCC-
Confidence 46888998876542 22322 11 11233332 34 454444444 4899997653 1 2333333222
Q ss_pred eeEeEEEee-CCcEEEEEEeeCCceEEEEEeCCCC
Q 018497 286 IWWPLGFTE-RGKIFIRGECRHGGYGLLVYNPHSD 319 (355)
Q Consensus 286 ~~~~~~~~~-~g~i~~~~~~~~~~~~l~~yd~~t~ 319 (355)
....+++.. ++.+++. ...|+ .+.+||+.++
T Consensus 313 ~V~~vafsP~d~~~l~s--~s~Dg-~v~iW~~~~~ 344 (357)
T 4g56_B 313 FVTGVAWSPLDHSKFTT--VGWDH-KVLHHHLPSE 344 (357)
T ss_dssp CEEEEEECSSSTTEEEE--EETTS-CEEEEECC--
T ss_pred CEEEEEEeCCCCCEEEE--EcCCC-eEEEEECCCC
Confidence 345566664 6777776 43677 4999998764
No 140
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=72.12 E-value=50 Score=28.81 Aligned_cols=97 Identities=8% Similarity=0.014 Sum_probs=53.6
Q ss_pred cEEEEEEcCCceeeEe-cCCCCCCCCCCceEEEEE-CCeEEEEEecCCCCccEEEEEEeccCC-C--------CC-----
Q 018497 209 WLIVSFDFAKEIFQTV-MMPYDLSTDDADKYLNVF-DGYLCVFATIPNNTFRSYELWVMKEYG-L--------TE----- 272 (355)
Q Consensus 209 ~~Il~fD~~~~~~~~i-~lP~~~~~~~~~~~L~~~-~G~L~~v~~~~~~~~~~l~iW~l~~~~-~--------~~----- 272 (355)
..|..+|+.+.+.... ... .. ....+.-. +|++.++...+ ..+.||.++... . ..
T Consensus 310 ~~i~i~d~~~~~~~~~~~~~-~~----~i~~~~~s~~~~~l~~~~~d----g~i~i~~~~~~~~~~~~~~~~~~~~~~~~ 380 (425)
T 1r5m_A 310 GSVRLWSLKQNTLLALSIVD-GV----PIFAGRISQDGQKYAVAFMD----GQVNVYDLKKLNSKSRSLYGNRDGILNPL 380 (425)
T ss_dssp SEEEEEETTTTEEEEEEECT-TC----CEEEEEECTTSSEEEEEETT----SCEEEEECHHHHC--------------CE
T ss_pred CcEEEEECCCCcEeEecccC-Cc----cEEEEEEcCCCCEEEEEECC----CeEEEEECCCCccceeeeecccccccCcc
Confidence 5899999987765332 322 11 11223322 36666666655 489999987521 0 00
Q ss_pred CeEEEEEecCCCc--eeEeEEEeeCCcEEEEEEeeCCceEEEEEeCC
Q 018497 273 SWTKLYTIEKPQR--IWWPLGFTERGKIFIRGECRHGGYGLLVYNPH 317 (355)
Q Consensus 273 ~W~~~~~i~~~~~--~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~ 317 (355)
....+..+..... ....+.+..+|..++. ...++ .+.+||++
T Consensus 381 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~--~~~dg-~i~iw~~~ 424 (425)
T 1r5m_A 381 PIPLYASYQSSQDNDYIFDLSWNCAGNKISV--AYSLQ-EGSVVAIP 424 (425)
T ss_dssp ECCEEEEECCTTCCCCEEEEEECTTSSEEEE--EESSS-CCEEEECC
T ss_pred cchhhhhhcCcccCCceEEEEccCCCceEEE--EecCc-eEEEEeec
Confidence 1114455544321 2455666677776665 43666 48999886
No 141
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=72.10 E-value=57 Score=29.54 Aligned_cols=112 Identities=13% Similarity=0.126 Sum_probs=63.0
Q ss_pred CceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEecCCCCCCCCCCceEEEEE-CCe-EEEEEecCCCCccEEEEEEecc
Q 018497 190 NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF-DGY-LCVFATIPNNTFRSYELWVMKE 267 (355)
Q Consensus 190 ~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i~lP~~~~~~~~~~~L~~~-~G~-L~~v~~~~~~~~~~l~iW~l~~ 267 (355)
+|.||+.... ..|..||+.+++...+.-+ . . ....++.. +|+ |++...... ......+|...+
T Consensus 149 ~g~Lyv~d~~---------~~I~~id~~~~~v~~~~~~-~-~---~P~~ia~d~~G~~lyvad~~~~-~~~~~v~~~~~~ 213 (430)
T 3tc9_A 149 HNHLYLVGEQ---------HPTRLIDFEKEYVSTVYSG-L-S---KVRTICWTHEADSMIITNDQNN-NDRPNNYILTRE 213 (430)
T ss_dssp EEEEEEEEBT---------EEEEEEETTTTEEEEEECC-C-S---CEEEEEECTTSSEEEEEECCSC-TTSEEEEEEEGG
T ss_pred CCeEEEEeCC---------CcEEEEECCCCEEEEEecC-C-C---CcceEEEeCCCCEEEEEeCCCC-cccceEEEEeCC
Confidence 3889988653 3799999999888776322 1 1 12334433 365 777765432 122344454443
Q ss_pred CCCCCCeEEEEEecCCCceeEeEEEee-CCcEEEEEEeeCCceEEEEEeCCCCeEEEE
Q 018497 268 YGLTESWTKLYTIEKPQRIWWPLGFTE-RGKIFIRGECRHGGYGLLVYNPHSDTFKCI 324 (355)
Q Consensus 268 ~~~~~~W~~~~~i~~~~~~~~~~~~~~-~g~i~~~~~~~~~~~~l~~yd~~t~~~~~v 324 (355)
..|.....+.... ...-+++.. +|.||+. ....+ .+..||++++....+
T Consensus 214 ----g~~~~~~~l~~~~-~p~giavdp~~g~lyv~--d~~~~-~V~~~~~~~~~~~~~ 263 (430)
T 3tc9_A 214 ----SGFKVITELTKGQ-NCNGAETHPINGELYFN--SWNAG-QVFRYDFTTQETTPL 263 (430)
T ss_dssp ----GTSCSEEEEEECS-SCCCEEECTTTCCEEEE--ETTTT-EEEEEETTTTEEEEE
T ss_pred ----CceeeeeeeccCC-CceEEEEeCCCCEEEEE--ECCCC-EEEEEECCCCcEEEE
Confidence 2233212221111 122355666 6789988 53445 599999998877443
No 142
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=71.93 E-value=52 Score=28.93 Aligned_cols=117 Identities=10% Similarity=0.037 Sum_probs=62.6
Q ss_pred CceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEec-CCCCCCCCCCceEEEE-ECCeEEEEEecCCCCccEEEEEEecc
Q 018497 190 NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVM-MPYDLSTDDADKYLNV-FDGYLCVFATIPNNTFRSYELWVMKE 267 (355)
Q Consensus 190 ~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i~-lP~~~~~~~~~~~L~~-~~G~L~~v~~~~~~~~~~l~iW~l~~ 267 (355)
+|.....+..+ ..|..+|+.+.+....- .. ... . ....+.- -+|++.+++.... ....+.+|.+..
T Consensus 187 ~~~~l~~~~~d--------~~i~iwd~~~~~~~~~~~~~-~~~-~-~~~~~~~~~~~~~l~~g~~~~-~d~~i~iwd~~~ 254 (402)
T 2aq5_A 187 DGALICTSCRD--------KRVRVIEPRKGTVVAEKDRP-HEG-T-RPVHAVFVSEGKILTTGFSRM-SERQVALWDTKH 254 (402)
T ss_dssp TSSCEEEEETT--------SEEEEEETTTTEEEEEEECS-SCS-S-SCCEEEECSTTEEEEEEECTT-CCEEEEEEETTB
T ss_pred CCCEEEEEecC--------CcEEEEeCCCCceeeeeccC-CCC-C-cceEEEEcCCCcEEEEeccCC-CCceEEEEcCcc
Confidence 56555544433 58999999887653321 12 111 1 1122332 3477666653110 126999999876
Q ss_pred CCCCCCeEEEEEecCCCceeEeEEEeeCCcEEE-EEEeeCCceEEEEEeCCCCe--EEEEE
Q 018497 268 YGLTESWTKLYTIEKPQRIWWPLGFTERGKIFI-RGECRHGGYGLLVYNPHSDT--FKCIG 325 (355)
Q Consensus 268 ~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~-~~~~~~~~~~l~~yd~~t~~--~~~v~ 325 (355)
.. .=.....+.... ....+.+..+|..++ . ...++ .+.+||+++++ +..+.
T Consensus 255 ~~---~~~~~~~~~~~~-~v~~~~~s~~~~~l~~~--g~~dg-~i~i~d~~~~~~~~~~l~ 308 (402)
T 2aq5_A 255 LE---EPLSLQELDTSS-GVLLPFFDPDTNIVYLC--GKGDS-SIRYFEITSEAPFLHYLS 308 (402)
T ss_dssp CS---SCSEEEECCCCS-SCEEEEEETTTTEEEEE--ETTCS-CEEEEEECSSTTCEEEEE
T ss_pred cc---CCceEEeccCCC-ceeEEEEcCCCCEEEEE--EcCCC-eEEEEEecCCCcceEeec
Confidence 32 112223333222 234456677776554 4 32466 59999999887 65553
No 143
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=71.80 E-value=55 Score=29.22 Aligned_cols=184 Identities=10% Similarity=0.133 Sum_probs=92.1
Q ss_pred EEEeeeCceEEEeecCCCCceEEEEcCCcccEEecCCCCCCCceeEEEEecCC----CCCCcEEEEEEcCCCceeEeccC
Q 018497 96 DVVGSCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVS----GHLDDFKVVYSLRSNSWKNIAYG 171 (355)
Q Consensus 96 ~~~~s~~GLl~l~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~g~d~~~----~~~~~ykvvyss~t~~W~~~~~~ 171 (355)
..+...+.+++... .++.+.|||..+++....-..... ....+.+++.. +..+..++ |+.+++.-...- .
T Consensus 163 ~~~~~~~~~l~s~~---~dg~i~vwd~~~~~~~~~~~~h~~-~v~~~~~~~~~l~s~s~dg~i~~-wd~~~~~~~~~~-~ 236 (445)
T 2ovr_B 163 WSSQMRDNIIISGS---TDRTLKVWNAETGECIHTLYGHTS-TVRCMHLHEKRVVSGSRDATLRV-WDIETGQCLHVL-M 236 (445)
T ss_dssp EEEEEETTEEEEEE---TTSCEEEEETTTTEEEEEECCCSS-CEEEEEEETTEEEEEETTSEEEE-EESSSCCEEEEE-E
T ss_pred EEEEecCCEEEEEe---CCCeEEEEECCcCcEEEEECCCCC-cEEEEEecCCEEEEEeCCCEEEE-EECCCCcEEEEE-c
Confidence 33444455555555 578899999998876532221111 11333333320 00111222 666654321111 0
Q ss_pred CCceeeeccccccceeEeCceEEEEEeeeccCCCCCCcEEEEEEcCCceeeE-ecCCCCCCCCCCceEEEEECCeEEEEE
Q 018497 172 FPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQT-VMMPYDLSTDDADKYLNVFDGYLCVFA 250 (355)
Q Consensus 172 ~p~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~-i~lP~~~~~~~~~~~L~~~~G~L~~v~ 250 (355)
... ..-. .+..+|.....+..+ ..|..+|+.+.+... +... . ....-+..+|...+++
T Consensus 237 ~~~----~~v~---~~~~~~~~l~~~~~d--------g~i~iwd~~~~~~~~~~~~~---~---~~v~~~~~~~~~l~~~ 295 (445)
T 2ovr_B 237 GHV----AAVR---CVQYDGRRVVSGAYD--------FMVKVWDPETETCLHTLQGH---T---NRVYSLQFDGIHVVSG 295 (445)
T ss_dssp CCS----SCEE---EEEECSSCEEEEETT--------SCEEEEEGGGTEEEEEECCC---S---SCEEEEEECSSEEEEE
T ss_pred CCc----ccEE---EEEECCCEEEEEcCC--------CEEEEEECCCCcEeEEecCC---C---CceEEEEECCCEEEEE
Confidence 000 0001 444577666655544 578999988765432 2211 1 1233334477776666
Q ss_pred ecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeE
Q 018497 251 TIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTF 321 (355)
Q Consensus 251 ~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~~ 321 (355)
..++ .+.+|.++.. .....+.... ..+.++..++..++. ...++ .+..||+++++.
T Consensus 296 ~~d~----~i~i~d~~~~------~~~~~~~~~~--~~v~~~~~~~~~l~~--~~~dg-~i~vwd~~~~~~ 351 (445)
T 2ovr_B 296 SLDT----SIRVWDVETG------NCIHTLTGHQ--SLTSGMELKDNILVS--GNADS-TVKIWDIKTGQC 351 (445)
T ss_dssp ETTS----CEEEEETTTC------CEEEEECCCC--SCEEEEEEETTEEEE--EETTS-CEEEEETTTCCE
T ss_pred eCCC----eEEEEECCCC------CEEEEEcCCc--ccEEEEEEeCCEEEE--EeCCC-eEEEEECCCCcE
Confidence 6654 8999998752 2333333222 112223334556665 32566 499999988764
No 144
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=70.92 E-value=62 Score=29.40 Aligned_cols=113 Identities=12% Similarity=0.169 Sum_probs=61.1
Q ss_pred eeEeC-----ceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEecCCCCCCCCCCceEEEE-ECCeEEEEEecCCCCccE
Q 018497 186 SVFLN-----GSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNV-FDGYLCVFATIPNNTFRS 259 (355)
Q Consensus 186 ~v~~~-----G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i~lP~~~~~~~~~~~L~~-~~G~L~~v~~~~~~~~~~ 259 (355)
++.++ |.|||.... ..|..+|+.+.+...+.-+ .. ....++. .+|.|+++..... ....
T Consensus 143 gvavd~~s~~g~Lyv~D~~---------~~I~~id~~~g~v~~~~~~-~~----~P~giavd~dG~lyVad~~~~-~~~~ 207 (433)
T 4hw6_A 143 RMMFDPNSNYDDLYWVGQR---------DAFRHVDFVNQYVDIKTTN-IG----QCADVNFTLNGDMVVVDDQSS-DTNT 207 (433)
T ss_dssp EEEECTTTTTCEEEEECBT---------SCEEEEETTTTEEEEECCC-CS----CEEEEEECTTCCEEEEECCSC-TTSE
T ss_pred eEEEccccCCCEEEEEeCC---------CCEEEEECCCCEEEEeecC-CC----CccEEEECCCCCEEEEcCCCC-cccc
Confidence 66666 899997653 3799999998888776322 11 1223333 3477877765321 1122
Q ss_pred EEEEEeccCCCCCCeEEEEEecCCCceeEeEEEee-CCcEEEEEEeeCCceEEEEEeCCCCeE
Q 018497 260 YELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTE-RGKIFIRGECRHGGYGLLVYNPHSDTF 321 (355)
Q Consensus 260 l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~-~g~i~~~~~~~~~~~~l~~yd~~t~~~ 321 (355)
-.++...+ ..|.....+.... ...-+++.. +|.||+. ....+ .+..||+++++.
T Consensus 208 gv~~~~~~----~~~~~~~~~~~~~-~P~giavd~~~G~lyv~--d~~~~-~V~~~d~~~g~~ 262 (433)
T 4hw6_A 208 GIYLFTRA----SGFTERLSLCNAR-GAKTCAVHPQNGKIYYT--RYHHA-MISSYDPATGTL 262 (433)
T ss_dssp EEEEECGG----GTTCCEEEEEECS-SBCCCEECTTTCCEEEC--BTTCS-EEEEECTTTCCE
T ss_pred eEEEEECC----CCeeccccccccC-CCCEEEEeCCCCeEEEE--ECCCC-EEEEEECCCCeE
Confidence 22333332 1232111121110 122255565 6788887 52344 589999987776
No 145
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=70.64 E-value=47 Score=29.29 Aligned_cols=102 Identities=12% Similarity=0.034 Sum_probs=44.8
Q ss_pred eCceEEEEEeeeccCCCCCCcEEEEEEcCCceeeE-ecCCCCCCCCCCceEEEEECCeEEEEEecCCCCccEEEEEEecc
Q 018497 189 LNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQT-VMMPYDLSTDDADKYLNVFDGYLCVFATIPNNTFRSYELWVMKE 267 (355)
Q Consensus 189 ~~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~-i~lP~~~~~~~~~~~L~~~~G~L~~v~~~~~~~~~~l~iW~l~~ 267 (355)
.+|.+|.-..+. .|.++|..+++..- +..+ .. ......++.|++... + ..+..|-.+.
T Consensus 91 ~~~~v~~g~~dg---------~v~a~D~~tG~~~w~~~~~-~~------~~~~p~~~~v~~~~~-d----g~v~a~d~~t 149 (369)
T 2hz6_A 91 SDGILYMGKKQD---------IWYVIDLLTGEKQQTLSSA-FA------DSLSPSTSLLYLGRT-E----YTITMYDTKT 149 (369)
T ss_dssp ----CCCCEEEE---------EEEEECCC-----------------------------EEEEEE-E----EEEECCCSSS
T ss_pred cCCEEEEEeCCC---------EEEEEECCCCcEEEEecCC-Cc------ccccccCCEEEEEec-C----CEEEEEECCC
Confidence 677777655444 79999998664321 1222 11 111224455555433 2 2555555443
Q ss_pred CCCCCCeEEEEEecCCCceeEeEEEee----CCcEEEEEEeeCCceEEEEEeCCCCeEEE
Q 018497 268 YGLTESWTKLYTIEKPQRIWWPLGFTE----RGKIFIRGECRHGGYGLLVYNPHSDTFKC 323 (355)
Q Consensus 268 ~~~~~~W~~~~~i~~~~~~~~~~~~~~----~g~i~~~~~~~~~~~~l~~yd~~t~~~~~ 323 (355)
.+..|.....-. ....+.. ++.+++. . .++ .++.+|.++++...
T Consensus 150 --G~~~W~~~~~~~------~~~~~~~~~~~~~~v~~~--~-~dg-~v~a~d~~tG~~~W 197 (369)
T 2hz6_A 150 --RELRWNATYFDY------AASLPEDDVDYKMSHFVS--N-GDG-LVVTVDSESGDVLW 197 (369)
T ss_dssp --SSCCCEEEEEEE------CCBCCCCCTTCCCCEEEE--E-TSC-EEEEECTTTCCEEE
T ss_pred --CCEEEeEecccc------cCccccCCccccceEEEE--C-CCC-EEEEEECCCCcEEE
Confidence 245688643211 1111222 2567766 5 566 49999999888644
No 146
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=70.63 E-value=20 Score=35.04 Aligned_cols=116 Identities=16% Similarity=0.172 Sum_probs=60.6
Q ss_pred eeEeCceEEEEEeeeccCCCCCCcEEEEEEcCC--ceeeEe-cCCCCCC-----CCCCceEEEEECCeEEEEEecCCCCc
Q 018497 186 SVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAK--EIFQTV-MMPYDLS-----TDDADKYLNVFDGYLCVFATIPNNTF 257 (355)
Q Consensus 186 ~v~~~G~lyw~~~~~~~~~~~~~~~Il~fD~~~--~~~~~i-~lP~~~~-----~~~~~~~L~~~~G~L~~v~~~~~~~~ 257 (355)
+++.+|.+|...... .|.++|..+ +.|+.- ..+ ... .+.....++..+|+|++... +
T Consensus 66 P~v~~g~vyv~~~~~---------~v~AlD~~tG~~~W~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~v~v~~~-d---- 130 (689)
T 1yiq_A 66 PIVVDGVMYTTGPFS---------VVYALDARDGRLIWKYDPQSD-RHRAGEACCDAVNRGVAVWKGKVYVGVL-D---- 130 (689)
T ss_dssp CEEETTEEEEECGGG---------CEEEEETTTCCEEEEECCCCC-GGGGGGCTTCSCCCCCEEETTEEEEECT-T----
T ss_pred CEEECCEEEEEcCCC---------eEEEEECCCCceeEEEcCCCC-ccccccccccCCCCccEEECCEEEEEcc-C----
Confidence 788999999987654 799999864 456642 222 110 00011223456777766542 2
Q ss_pred cEEEEEEeccCCCCCCeEEEEEecCCCc---eeEeEEEeeCCcEEEEEEeeC-----CceEEEEEeCCCCeEEE
Q 018497 258 RSYELWVMKEYGLTESWTKLYTIEKPQR---IWWPLGFTERGKIFIRGECRH-----GGYGLLVYNPHSDTFKC 323 (355)
Q Consensus 258 ~~l~iW~l~~~~~~~~W~~~~~i~~~~~---~~~~~~~~~~g~i~~~~~~~~-----~~~~l~~yd~~t~~~~~ 323 (355)
..+..+-.+. .+..|......+.... ...|+. .+|.||+. ... ++ .++.||.+|++...
T Consensus 131 g~l~AlDa~T--G~~~W~~~~~~~~~~~~~~~~sP~v--~~g~v~vg--~~~~~~~~~g-~v~a~D~~tG~~~W 197 (689)
T 1yiq_A 131 GRLEAIDAKT--GQRAWSVDTRADHKRSYTITGAPRV--VNGKVVIG--NGGAEFGVRG-YVTAYDAETGKEAW 197 (689)
T ss_dssp SEEEEEETTT--CCEEEEEECCSCTTSCCBCCSCCEE--ETTEEEEC--CBCTTTCCBC-EEEEEETTTCCEEE
T ss_pred CEEEEEECCC--CCEeeeecCcCCCCCCccccCCcEE--ECCEEEEE--eCCCccCCCC-EEEEEECCCCcEEE
Confidence 2433332222 2345665432111110 122332 35666665 311 34 59999999988654
No 147
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=70.06 E-value=48 Score=27.81 Aligned_cols=119 Identities=7% Similarity=-0.010 Sum_probs=60.7
Q ss_pred eEeCceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEecCCCCCCCCCCceEEEEECCeEEEEEecCCCCccEEEEEEec
Q 018497 187 VFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVFDGYLCVFATIPNNTFRSYELWVMK 266 (355)
Q Consensus 187 v~~~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i~lP~~~~~~~~~~~L~~~~G~L~~v~~~~~~~~~~l~iW~l~ 266 (355)
+.-||.++. ... ..|.+||...+..-.+..| .... ....-...+|++.++.... .-.|+.++
T Consensus 44 ~~pdG~ilv-s~~---------~~V~~~d~~G~~~W~~~~~-~~~~--~~~~~~~~dG~~lv~~~~~-----~~~v~~vd 105 (276)
T 3no2_A 44 ATKAGEILF-SYS---------KGAKMITRDGRELWNIAAP-AGCE--MQTARILPDGNALVAWCGH-----PSTILEVN 105 (276)
T ss_dssp ECTTSCEEE-ECB---------SEEEEECTTSCEEEEEECC-TTCE--EEEEEECTTSCEEEEEEST-----TEEEEEEC
T ss_pred ECCCCCEEE-eCC---------CCEEEECCCCCEEEEEcCC-CCcc--ccccEECCCCCEEEEecCC-----CCEEEEEe
Confidence 444888777 433 3799999954433444444 2211 1111122357776665542 22455665
Q ss_pred cCCCCCCeEEEEEecCCC--ceeEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEEEEEEe
Q 018497 267 EYGLTESWTKLYTIEKPQ--RIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFKCIGVH 327 (355)
Q Consensus 267 ~~~~~~~W~~~~~i~~~~--~~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~~~~v~~~ 327 (355)
..+ +..|.....-.... .....+....+|.+++. ...++ .+..||++.+.+.+....
T Consensus 106 ~~G-k~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~--~~~~~-~v~~~d~~G~~~w~~~~~ 164 (276)
T 3no2_A 106 MKG-EVLSKTEFETGIERPHAQFRQINKNKKGNYLVP--LFATS-EVREIAPNGQLLNSVKLS 164 (276)
T ss_dssp TTS-CEEEEEEECCSCSSGGGSCSCCEECTTSCEEEE--ETTTT-EEEEECTTSCEEEEEECS
T ss_pred CCC-CEEEEEeccCCCCcccccccCceECCCCCEEEE--ecCCC-EEEEECCCCCEEEEEECC
Confidence 422 23344322111100 01222445667888877 53455 599999996666666543
No 148
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=69.85 E-value=85 Score=30.57 Aligned_cols=98 Identities=5% Similarity=0.087 Sum_probs=51.4
Q ss_pred cEEEEEEcCCc-eeeEecCCCCCCCCCCceEEEEE--CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCc
Q 018497 209 WLIVSFDFAKE-IFQTVMMPYDLSTDDADKYLNVF--DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQR 285 (355)
Q Consensus 209 ~~Il~fD~~~~-~~~~i~lP~~~~~~~~~~~L~~~--~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~ 285 (355)
..|..+|+.++ ..... +. ... .....+.-. +|.+.++...+ ..+.+|.+.... ...... .....
T Consensus 119 g~i~vw~~~~~~~~~~~-~~-~~~--~~v~~~~~~p~~~~~l~~~~~d----g~v~vwd~~~~~--~~~~~~--~~~~~- 185 (814)
T 3mkq_A 119 LTVKLWNWENNWALEQT-FE-GHE--HFVMCVAFNPKDPSTFASGCLD----RTVKVWSLGQST--PNFTLT--TGQER- 185 (814)
T ss_dssp SEEEEEEGGGTSEEEEE-EE-CCS--SCEEEEEEETTEEEEEEEEETT----SEEEEEETTCSS--CSEEEE--CCCTT-
T ss_pred CEEEEEECCCCceEEEE-Ec-CCC--CcEEEEEEEcCCCCEEEEEeCC----CeEEEEECCCCc--ceeEEe--cCCCC-
Confidence 58999998876 33222 11 111 012233333 45566666555 489999886521 222221 11101
Q ss_pred eeEeEEEee--CCcEEEEEEeeCCceEEEEEeCCCCeEE
Q 018497 286 IWWPLGFTE--RGKIFIRGECRHGGYGLLVYNPHSDTFK 322 (355)
Q Consensus 286 ~~~~~~~~~--~g~i~~~~~~~~~~~~l~~yd~~t~~~~ 322 (355)
....+.+.. +|..++. ...++ .+..||.++++..
T Consensus 186 ~v~~~~~~~~~~~~~l~~--~~~dg-~i~~~d~~~~~~~ 221 (814)
T 3mkq_A 186 GVNYVDYYPLPDKPYMIT--ASDDL-TIKIWDYQTKSCV 221 (814)
T ss_dssp CCCEEEECCSTTCCEEEE--ECTTS-EEEEEETTTTEEE
T ss_pred CEEEEEEEECCCCCEEEE--EeCCC-EEEEEECCCCcEE
Confidence 133344444 6666666 42566 5999999887753
No 149
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=69.29 E-value=49 Score=27.65 Aligned_cols=36 Identities=19% Similarity=0.565 Sum_probs=24.3
Q ss_pred eEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCC-eEEEEE
Q 018497 287 WWPLGFTERGKIFIRGECRHGGYGLLVYNPHSD-TFKCIG 325 (355)
Q Consensus 287 ~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~-~~~~v~ 325 (355)
...+.+..+|.+++. ...++ .+.+||++++ .++.+.
T Consensus 309 v~~~~~s~~~~~l~s--~~~dg-~v~iw~~~~~~~~~~~~ 345 (351)
T 3f3f_A 309 VWSVSWNLTGTILSS--AGDDG-KVRLWKATYSNEFKCMS 345 (351)
T ss_dssp EEEEEECSSSCCEEE--EETTS-CEEEEEECTTSCEEEEE
T ss_pred EEEEEEcCCCCEEEE--ecCCC-cEEEEecCcCcchhhee
Confidence 445666677776666 43677 4999999985 455554
No 150
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=68.94 E-value=51 Score=27.70 Aligned_cols=98 Identities=11% Similarity=0.048 Sum_probs=55.8
Q ss_pred cEEEEEEcCCceeeEe-cCCCCCCCCCCceEEEEE----CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCC
Q 018497 209 WLIVSFDFAKEIFQTV-MMPYDLSTDDADKYLNVF----DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKP 283 (355)
Q Consensus 209 ~~Il~fD~~~~~~~~i-~lP~~~~~~~~~~~L~~~----~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~ 283 (355)
..|..+|+.+..-... ... .. ........ ++.+.+....+ ..+.||-++. -..+.++...
T Consensus 163 ~~v~iwd~~~~~~~~~~~~~-~~----~~v~~~~~~~~~~~~~l~s~s~D----~~i~iWd~~~------~~~~~~~~~h 227 (304)
T 2ynn_A 163 RTVKVWSLGQSTPNFTLTTG-QE----RGVNYVDYYPLPDKPYMITASDD----LTIKIWDYQT------KSCVATLEGH 227 (304)
T ss_dssp SEEEEEETTCSSCSEEEECC-CT----TCEEEEEECCSTTCCEEEEEETT----SEEEEEETTT------TEEEEEEECC
T ss_pred CeEEEEECCCCCccceeccC-Cc----CcEEEEEEEEcCCCCEEEEEcCC----CeEEEEeCCC------CccceeeCCC
Confidence 5788999875543221 111 11 11222221 35555555554 4999998764 1344444432
Q ss_pred CceeEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEEEE
Q 018497 284 QRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFKCI 324 (355)
Q Consensus 284 ~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~~~~v 324 (355)
......+.+..++.+++. ...++ .+.+||.++.+....
T Consensus 228 ~~~v~~~~~~p~~~~l~s--~s~Dg-~i~iWd~~~~~~~~~ 265 (304)
T 2ynn_A 228 MSNVSFAVFHPTLPIIIS--GSEDG-TLKIWNSSTYKVEKT 265 (304)
T ss_dssp SSCEEEEEECSSSSEEEE--EETTS-CEEEEETTTCCEEEE
T ss_pred CCCEEEEEECCCCCEEEE--EcCCC-eEEEEECCCCceeee
Confidence 223455666777777777 43677 499999999876543
No 151
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=68.85 E-value=53 Score=27.83 Aligned_cols=112 Identities=9% Similarity=-0.057 Sum_probs=59.3
Q ss_pred CceEEEEEeeeccCCCCCCcEEEEEEcCCceee-Ee---cCCCCCCCCCCceEEEEEC-Ce-EEEEEecCCCCccEEEEE
Q 018497 190 NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQ-TV---MMPYDLSTDDADKYLNVFD-GY-LCVFATIPNNTFRSYELW 263 (355)
Q Consensus 190 ~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~-~i---~lP~~~~~~~~~~~L~~~~-G~-L~~v~~~~~~~~~~l~iW 263 (355)
+|.....+... ..|..||+.+.+.. .+ .+. ... .....+.-.. |+ +.+....+ ..+.+|
T Consensus 223 ~~~~l~~~~~d--------g~i~i~d~~~~~~~~~~~~~~~~-~~~--~~v~~~~~~~~~~~~l~~~~~d----g~i~iw 287 (357)
T 3i2n_A 223 SMNKLVATSLE--------GKFHVFDMRTQHPTKGFASVSEK-AHK--STVWQVRHLPQNRELFLTAGGA----GGLHLW 287 (357)
T ss_dssp SCCEEEEEEST--------TEEEEEEEEEEETTTEEEEEEEE-CCS--SCEEEEEEETTEEEEEEEEETT----SEEEEE
T ss_pred CCCEEEEECCC--------CeEEEEeCcCCCcccceeeeccC-CCc--CCEEEEEECCCCCcEEEEEeCC----CcEEEe
Confidence 45555554433 57888888754321 11 111 111 1122333333 55 45555544 499999
Q ss_pred EeccCCC-------------CCCeEEEEEecCCCceeEeEEEeeCCcEEE-EEEeeCCceEEEEEeCCCC
Q 018497 264 VMKEYGL-------------TESWTKLYTIEKPQRIWWPLGFTERGKIFI-RGECRHGGYGLLVYNPHSD 319 (355)
Q Consensus 264 ~l~~~~~-------------~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~-~~~~~~~~~~l~~yd~~t~ 319 (355)
.++.... ...+.....+.........+++..+|..++ . ...++ .+.+||+.+.
T Consensus 288 d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s--~~~d~-~i~iw~~~~~ 354 (357)
T 3i2n_A 288 KYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVC--SSFDQ-TVRVLIVTKL 354 (357)
T ss_dssp EEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEE--EETTS-EEEEEEECC-
T ss_pred ecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEE--ecCCC-cEEEEECCCc
Confidence 9975321 113455666554332355566777775554 4 32567 4999998764
No 152
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=68.74 E-value=50 Score=27.48 Aligned_cols=60 Identities=12% Similarity=0.201 Sum_probs=38.7
Q ss_pred cEEEEEEeccCCCCCCeEEEEEecCCCceeEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEEEE
Q 018497 258 RSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFKCI 324 (355)
Q Consensus 258 ~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~~~~v 324 (355)
.++.||-++. .+-.+.............+++..+|+.++. ...++ .+..||.++++....
T Consensus 45 ~tV~iWd~~t----g~~~~~~~~~~~~~~V~~v~~~~~~~~l~s--gs~Dg-~v~iw~~~~~~~~~~ 104 (318)
T 4ggc_A 45 NSVYLWSASS----GDILQLLQMEQPGEYISSVAWIKEGNYLAV--GTSSA-EVQLWDVQQQKRLRN 104 (318)
T ss_dssp TEEEEEETTT----CCEEEEEECCSTTCCEEEEEECTTSSEEEE--EETTS-EEEEEETTTTEEEEE
T ss_pred CEEEEEECCC----CCEEEEEEecCCCCeEEEEEECCCCCEEEE--EECCC-cEEEeecCCceeEEE
Confidence 4899998764 223333333322223556777788887777 43677 599999999886443
No 153
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=68.49 E-value=26 Score=29.85 Aligned_cols=109 Identities=10% Similarity=0.028 Sum_probs=57.3
Q ss_pred EeCceEEEEEeeeccCCCCCCcEEEEEEcCCceee-EecCCCCCCCCCCceEEEEE-CCe-EEEEEecCCCCccEEEEEE
Q 018497 188 FLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQ-TVMMPYDLSTDDADKYLNVF-DGY-LCVFATIPNNTFRSYELWV 264 (355)
Q Consensus 188 ~~~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~-~i~lP~~~~~~~~~~~L~~~-~G~-L~~v~~~~~~~~~~l~iW~ 264 (355)
.-++.+|...... ..|..+|+.+.+.. .++++ .... ...++.. +|+ +++.. ... ..+.+|.
T Consensus 8 ~~~~~~~v~~~~~--------~~v~~~d~~~~~~~~~~~~~-~~~~---~~~~~~s~dg~~~~v~~-~~~---~~i~~~d 71 (349)
T 1jmx_B 8 KAGHEYMIVTNYP--------NNLHVVDVASDTVYKSCVMP-DKFG---PGTAMMAPDNRTAYVLN-NHY---GDIYGID 71 (349)
T ss_dssp CTTCEEEEEEETT--------TEEEEEETTTTEEEEEEECS-SCCS---SCEEEECTTSSEEEEEE-TTT---TEEEEEE
T ss_pred cCCCEEEEEeCCC--------CeEEEEECCCCcEEEEEecC-CCCC---CceeEECCCCCEEEEEe-CCC---CcEEEEe
Confidence 3456666655443 68999999987764 45666 4111 1223333 465 44444 333 4777776
Q ss_pred eccCCCCCCeEEEEEecCCCc------eeEeEEEeeCCcEEEEEEeeC-----------CceEEEEEeCCCCe
Q 018497 265 MKEYGLTESWTKLYTIEKPQR------IWWPLGFTERGKIFIRGECRH-----------GGYGLLVYNPHSDT 320 (355)
Q Consensus 265 l~~~~~~~~W~~~~~i~~~~~------~~~~~~~~~~g~i~~~~~~~~-----------~~~~l~~yd~~t~~ 320 (355)
++. . .....+..... ....+.+..+|+.++.. ... .+ .+..||+++++
T Consensus 72 ~~t----~--~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~-~~~~~~~~~~~~~~~~-~i~~~d~~~~~ 136 (349)
T 1jmx_B 72 LDT----C--KNTFHANLSSVPGEVGRSMYSFAISPDGKEVYAT-VNPTQRLNDHYVVKPP-RLEVFSTADGL 136 (349)
T ss_dssp TTT----T--EEEEEEESCCSTTEEEECSSCEEECTTSSEEEEE-EEEEEECSSCEEECCC-EEEEEEGGGGG
T ss_pred CCC----C--cEEEEEEcccccccccccccceEECCCCCEEEEE-cccccccccccccCCC-eEEEEECCCcc
Confidence 653 1 22233332210 12235667777554441 211 24 59999998844
No 154
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=67.97 E-value=67 Score=28.63 Aligned_cols=113 Identities=12% Similarity=0.082 Sum_probs=61.8
Q ss_pred eeEeCceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEecCCCCCCCCCCceEEEEECCeEEEEEecCCCCccEEEEEEe
Q 018497 186 SVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVFDGYLCVFATIPNNTFRSYELWVM 265 (355)
Q Consensus 186 ~v~~~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i~lP~~~~~~~~~~~L~~~~G~L~~v~~~~~~~~~~l~iW~l 265 (355)
.+..+|.+...+..+ ..|..+|+.+.+.... +. ... ....-+...+.+.+.+..+ ..+.+|.+
T Consensus 178 ~l~~~~~~l~sg~~d--------g~i~vwd~~~~~~~~~-~~-~h~---~~v~~l~~~~~~l~s~s~d----g~i~vwd~ 240 (435)
T 1p22_A 178 CLQYDERVIITGSSD--------STVRVWDVNTGEMLNT-LI-HHC---EAVLHLRFNNGMMVTCSKD----RSIAVWDM 240 (435)
T ss_dssp EEECCSSEEEEEETT--------SCEEEEESSSCCEEEE-EC-CCC---SCEEEEECCTTEEEEEETT----SCEEEEEC
T ss_pred EEEECCCEEEEEcCC--------CeEEEEECCCCcEEEE-Ec-CCC---CcEEEEEEcCCEEEEeeCC----CcEEEEeC
Confidence 445577766655544 5799999987765322 11 111 1233334455555555555 48999998
Q ss_pred ccCCCCCCeEEEEEecCCCceeEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEEE
Q 018497 266 KEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFKC 323 (355)
Q Consensus 266 ~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~~~~ 323 (355)
+.. ........+.........+.+ ++..++. ...++ .+.+||+++++...
T Consensus 241 ~~~---~~~~~~~~~~~~~~~v~~~~~--~~~~l~s--~~~dg-~i~vwd~~~~~~~~ 290 (435)
T 1p22_A 241 ASP---TDITLRRVLVGHRAAVNVVDF--DDKYIVS--ASGDR-TIKVWNTSTCEFVR 290 (435)
T ss_dssp SSS---SCCEEEEEECCCSSCEEEEEE--ETTEEEE--EETTS-EEEEEETTTCCEEE
T ss_pred CCC---CCceeeeEecCCCCcEEEEEe--CCCEEEE--EeCCC-eEEEEECCcCcEEE
Confidence 752 222222333222212223333 5555555 32667 49999999887543
No 155
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=67.62 E-value=81 Score=29.46 Aligned_cols=181 Identities=12% Similarity=-0.026 Sum_probs=90.6
Q ss_pred ceEEEeecCCCCceEEEEcCCcccEEecCCCCCCC-------ceeEEEEecCCCCCCcEEEE-EEcCCCceeEeccCCCc
Q 018497 103 GVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNP-------RYLGFGVNSVSGHLDDFKVV-YSLRSNSWKNIAYGFPR 174 (355)
Q Consensus 103 GLl~l~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~-------~~~~~g~d~~~~~~~~ykvv-yss~t~~W~~~~~~~p~ 174 (355)
++++... ......++|..|++...+...+... ...+++-+.. .+...|. ++..++.++.+. ..+.
T Consensus 123 ~~~~~s~---~~~~~~l~d~~~g~~~~l~~~~~~~~~~spDG~~la~~~~~~---~~~~~i~~~d~~~g~~~~l~-~~~~ 195 (582)
T 3o4h_A 123 AVVFTGA---TEDRVALYALDGGGLRELARLPGFGFVSDIRGDLIAGLGFFG---GGRVSLFTSNLSSGGLRVFD-SGEG 195 (582)
T ss_dssp CEEEEEE---CSSCEEEEEEETTEEEEEEEESSCEEEEEEETTEEEEEEEEE---TTEEEEEEEETTTCCCEEEC-CSSC
T ss_pred eEEEEec---CCCCceEEEccCCcEEEeecCCCceEEECCCCCEEEEEEEcC---CCCeEEEEEcCCCCCceEee-cCCC
Confidence 3555554 3344558999999887775433310 1122222221 2223333 788888888765 3222
Q ss_pred eeeeccccccceeEeCceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEecCCCCCCCCCCceE------E-EEECCeEE
Q 018497 175 SIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKY------L-NVFDGYLC 247 (355)
Q Consensus 175 ~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i~lP~~~~~~~~~~~------L-~~~~G~L~ 247 (355)
..... ...=||+..+..... ....|..+|+++.+...+.-. ... ...+. . ..-+|+++
T Consensus 196 ~~~~~------~~SpDG~~l~~~~~~------~~~~i~~~d~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~spdg~~~ 260 (582)
T 3o4h_A 196 SFSSA------SISPGMKVTAGLETA------REARLVTVDPRDGSVEDLELP-SKD--FSSYRPTAITWLGYLPDGRLA 260 (582)
T ss_dssp EEEEE------EECTTSCEEEEEECS------SCEEEEEECTTTCCEEECCCS-CSH--HHHHCCSEEEEEEECTTSCEE
T ss_pred ccccc------eECCCCCEEEEccCC------CeeEEEEEcCCCCcEEEccCC-CcC--hhhhhhccccceeEcCCCcEE
Confidence 11100 223377655532222 234799999998887732211 110 00011 0 22357776
Q ss_pred EEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEeEEEeeCCcEEEEEEeeCCc-eEEEEEeCCCCeEEE
Q 018497 248 VFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGG-YGLLVYNPHSDTFKC 323 (355)
Q Consensus 248 ~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~-~~l~~yd~~t~~~~~ 323 (355)
+....++ ...||.+ +. ... .. .. ....+.+. +|++++.... ... ..++.+|.++ +.+.
T Consensus 261 ~~~~~~g----~~~l~~~---g~---~~~---~~-~~-~v~~~~~s-dg~~l~~~s~-~~~p~~l~~~d~~~-~~~~ 319 (582)
T 3o4h_A 261 VVARREG----RSAVFID---GE---RVE---AP-QG-NHGRVVLW-RGKLVTSHTS-LSTPPRIVSLPSGE-PLLE 319 (582)
T ss_dssp EEEEETT----EEEEEET---TE---EEC---CC-SS-EEEEEEEE-TTEEEEEEEE-TTEEEEEEEETTCC-EEEC
T ss_pred EEEEcCC----cEEEEEE---CC---eec---cC-CC-ceEEEEec-CCEEEEEEcC-CCCCCeEEEEcCCC-ceEE
Confidence 6666554 8999998 21 111 11 11 23345556 7777665212 221 2588888876 4433
No 156
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=67.56 E-value=63 Score=28.21 Aligned_cols=187 Identities=11% Similarity=0.018 Sum_probs=94.3
Q ss_pred eeeCceEEEeecCCCCceEEEEcCCcccEEecCCCCCCCceeEEEEecCCCCCCcEEEE---------EEcCCCceeEec
Q 018497 99 GSCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVV---------YSLRSNSWKNIA 169 (355)
Q Consensus 99 ~s~~GLl~l~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykvv---------yss~t~~W~~~~ 169 (355)
+..+|.|...+. ...++..+++.++....+..... ....++.+|+. .+...+. ++.....-+.+.
T Consensus 81 d~~~~~ly~~D~--~~~~I~r~~~~g~~~~~~~~~~~-~~p~glavd~~---~g~ly~~d~~~~~I~~~~~dG~~~~~l~ 154 (349)
T 3v64_C 81 HHRRELVFWSDV--TLDRILRANLNGSNVEEVVSTGL-ESPGGLAVDWV---HDKLYWTDSGTSRIEVANLDGAHRKVLL 154 (349)
T ss_dssp ETTTTEEEEEET--TTTEEEEEETTSCSCEEEECSSC-SCCCEEEEETT---TTEEEEEETTTTEEEEEETTSCSCEEEE
T ss_pred eccccEEEEEec--cCCceEEEecCCCCceEEEeCCC-CCccEEEEecC---CCeEEEEcCCCCeEEEEcCCCCceEEEE
Confidence 345788877774 56788888988776544322111 11246777765 4432222 444433222221
Q ss_pred cCCCceeeeccccccceeEe---CceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEecCCCCCCCCCCceEEEEE--CC
Q 018497 170 YGFPRSIEINRSHINSSVFL---NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF--DG 244 (355)
Q Consensus 170 ~~~p~~~~~~~~~~~~~v~~---~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i~lP~~~~~~~~~~~L~~~--~G 244 (355)
.... .... ++.+ +|.+||..... ...|..+|++...-..+- . .... ..-.|+.. +|
T Consensus 155 -~~~l----~~P~---~iavdp~~g~ly~td~~~-------~~~I~r~~~dG~~~~~~~-~-~~~~--~PnGla~d~~~~ 215 (349)
T 3v64_C 155 -WQSL----EKPR---AIALHPMEGTIYWTDWGN-------TPRIEASSMDGSGRRIIA-D-THLF--WPNGLTIDYAGR 215 (349)
T ss_dssp -CTTC----SCEE---EEEEETTTTEEEEEECSS-------SCEEEEEETTSCSCEESC-C-SSCS--CEEEEEEETTTT
T ss_pred -eCCC----CCcc---eEEEecCcCeEEEeccCC-------CCEEEEEeCCCCCcEEEE-E-CCCC--CcceEEEeCCCC
Confidence 1000 0111 3333 68999986542 368999999865444431 1 1111 22335543 68
Q ss_pred eEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEeEEEe-eCCcEEEEEEeeCCceEEEEEeCCCCe-EE
Q 018497 245 YLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFT-ERGKIFIRGECRHGGYGLLVYNPHSDT-FK 322 (355)
Q Consensus 245 ~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~-~~g~i~~~~~~~~~~~~l~~yd~~t~~-~~ 322 (355)
+||++.... .. |+..+-.+... ... +... ...|.++. .+|.||+. ....+ .+..+|..+++ .+
T Consensus 216 ~lY~aD~~~----~~--I~~~~~dG~~~--~~~--~~~~--~~~P~giav~~~~ly~t--d~~~~-~V~~~~~~~G~~~~ 280 (349)
T 3v64_C 216 RMYWVDAKH----HV--IERANLDGSHR--KAV--ISQG--LPHPFAITVFEDSLYWT--DWHTK-SINSANKFTGKNQE 280 (349)
T ss_dssp EEEEEETTT----TE--EEEEETTSCSC--EEE--ECSS--CSSEEEEEEETTEEEEE--ETTTT-EEEEEETTTCCSCE
T ss_pred EEEEEECCC----CE--EEEEeCCCCce--EEE--EeCC--CCCceEEEEECCEEEEe--cCCCC-eEEEEEccCCCccE
Confidence 899887643 24 44444322111 111 1111 12343333 45678888 52344 59999965544 44
Q ss_pred EEE
Q 018497 323 CIG 325 (355)
Q Consensus 323 ~v~ 325 (355)
.+.
T Consensus 281 ~i~ 283 (349)
T 3v64_C 281 IIR 283 (349)
T ss_dssp EEE
T ss_pred Eec
Confidence 443
No 157
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=66.80 E-value=65 Score=28.11 Aligned_cols=180 Identities=11% Similarity=0.081 Sum_probs=89.5
Q ss_pred CceEEEeecCCCCceEEEEcCCcccEEecCCCCCCCceeEEEEecCCCCCCcEEEE---------EEcCCCceeEeccCC
Q 018497 102 NGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVV---------YSLRSNSWKNIAYGF 172 (355)
Q Consensus 102 ~GLl~l~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykvv---------yss~t~~W~~~~~~~ 172 (355)
.+.|++.. ...+...++.+.+...+.... ....++.+|+. .+...+. ++..++.-+.+. ..
T Consensus 44 ~~~ll~~~----~~~I~~i~~~g~~~~~~~~~~--~~~~~l~~d~~---~~~ly~~D~~~~~I~r~~~~g~~~~~~~-~~ 113 (349)
T 3v64_C 44 EPVLLFAN----RIDIRQVLPHRSEYTLLLNNL--ENAIALDFHHR---RELVFWSDVTLDRILRANLNGSNVEEVV-ST 113 (349)
T ss_dssp CCEEEEEC----BSCEEEECTTSCCEEEEECSC--SCEEEEEEETT---TTEEEEEETTTTEEEEEETTSCSCEEEE-CS
T ss_pred CceeEeec----ccceEEEeCCCCeeEEeecCC--CceEEEEEecc---ccEEEEEeccCCceEEEecCCCCceEEE-eC
Confidence 44455444 334666677665554432211 12367777765 4433322 455444333322 11
Q ss_pred CceeeeccccccceeE---eCceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEecCCCCCCCCCCceEEEEE--CCeEE
Q 018497 173 PRSIEINRSHINSSVF---LNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF--DGYLC 247 (355)
Q Consensus 173 p~~~~~~~~~~~~~v~---~~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i~lP~~~~~~~~~~~L~~~--~G~L~ 247 (355)
.. .... ++. .+|.|||..... ..|.++|++...-..+. . .... ....++.. +|.|+
T Consensus 114 ~~----~~p~---glavd~~~g~ly~~d~~~--------~~I~~~~~dG~~~~~l~-~-~~l~--~P~~iavdp~~g~ly 174 (349)
T 3v64_C 114 GL----ESPG---GLAVDWVHDKLYWTDSGT--------SRIEVANLDGAHRKVLL-W-QSLE--KPRAIALHPMEGTIY 174 (349)
T ss_dssp SC----SCCC---EEEEETTTTEEEEEETTT--------TEEEEEETTSCSCEEEE-C-TTCS--CEEEEEEETTTTEEE
T ss_pred CC----CCcc---EEEEecCCCeEEEEcCCC--------CeEEEEcCCCCceEEEE-e-CCCC--CcceEEEecCcCeEE
Confidence 00 0111 443 378999987654 68999999876544432 1 1211 12334444 68888
Q ss_pred EEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEe--EEEe-eCCcEEEEEEeeCCceEEEEEeCCCCeEEEE
Q 018497 248 VFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWP--LGFT-ERGKIFIRGECRHGGYGLLVYNPHSDTFKCI 324 (355)
Q Consensus 248 ~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~--~~~~-~~g~i~~~~~~~~~~~~l~~yd~~t~~~~~v 324 (355)
+..... .-.|++.+-.+.. .+ .+-... ...| +++. .++.||+. ....+ .+..+|++....+.+
T Consensus 175 ~td~~~-----~~~I~r~~~dG~~---~~--~~~~~~-~~~PnGla~d~~~~~lY~a--D~~~~-~I~~~~~dG~~~~~~ 240 (349)
T 3v64_C 175 WTDWGN-----TPRIEASSMDGSG---RR--IIADTH-LFWPNGLTIDYAGRRMYWV--DAKHH-VIERANLDGSHRKAV 240 (349)
T ss_dssp EEECSS-----SCEEEEEETTSCS---CE--ESCCSS-CSCEEEEEEETTTTEEEEE--ETTTT-EEEEEETTSCSCEEE
T ss_pred EeccCC-----CCEEEEEeCCCCC---cE--EEEECC-CCCcceEEEeCCCCEEEEE--ECCCC-EEEEEeCCCCceEEE
Confidence 876543 1345555533211 11 111111 1234 4444 34578887 52334 589999887654444
No 158
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=66.45 E-value=72 Score=28.45 Aligned_cols=102 Identities=7% Similarity=0.059 Sum_probs=53.8
Q ss_pred cEEEEEEcCCce--eeEecCCCCCCCCCCceEEEEE-CC-eEEEEEecCCCCccEEEEEEeccCCCCC--------CeEE
Q 018497 209 WLIVSFDFAKEI--FQTVMMPYDLSTDDADKYLNVF-DG-YLCVFATIPNNTFRSYELWVMKEYGLTE--------SWTK 276 (355)
Q Consensus 209 ~~Il~fD~~~~~--~~~i~lP~~~~~~~~~~~L~~~-~G-~L~~v~~~~~~~~~~l~iW~l~~~~~~~--------~W~~ 276 (355)
..|..||+.+.. ...+... .. ....+.-. +| .+++.+..+ ..+.||.+...+... .-..
T Consensus 300 g~v~vwd~~~~~~~~~~~~~h-~~----~v~~i~~sp~~~~~l~s~~~d----~~i~iwd~~~~~~~~~~~~~~~~~~~~ 370 (430)
T 2xyi_A 300 KTVALWDLRNLKLKLHSFESH-KD----EIFQVQWSPHNETILASSGTD----RRLHVWDLSKIGEEQSTEDAEDGPPEL 370 (430)
T ss_dssp SEEEEEETTCTTSCSEEEECC-SS----CEEEEEECSSCTTEEEEEETT----SCCEEEEGGGTTCCCCHHHHHHCCTTE
T ss_pred CeEEEEeCCCCCCCeEEeecC-CC----CEEEEEECCCCCCEEEEEeCC----CcEEEEeCCCCccccCccccccCCcce
Confidence 579999998632 2333211 11 11222222 24 456666555 489999998632110 0123
Q ss_pred EEEecCCCceeEeEEEeeCCc-EEEEEEeeCCceEEEEEeCCCCeEE
Q 018497 277 LYTIEKPQRIWWPLGFTERGK-IFIRGECRHGGYGLLVYNPHSDTFK 322 (355)
Q Consensus 277 ~~~i~~~~~~~~~~~~~~~g~-i~~~~~~~~~~~~l~~yd~~t~~~~ 322 (355)
+...........-+.+..++. +++. ...++ .+.+|++.++.+.
T Consensus 371 ~~~~~~h~~~v~~~~~~p~~~~~l~s--~s~dg-~i~iw~~~~~~~~ 414 (430)
T 2xyi_A 371 LFIHGGHTAKISDFSWNPNEPWIICS--VSEDN-IMQVWQMAENVYN 414 (430)
T ss_dssp EEECCCCSSCEEEEEECSSSTTEEEE--EETTS-EEEEEEECHHHHC
T ss_pred EEEcCCCCCCceEEEECCCCCCEEEE--EECCC-CEEEeEccccccc
Confidence 333322221345566667776 6666 43566 4999998876553
No 159
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=66.29 E-value=78 Score=28.79 Aligned_cols=73 Identities=10% Similarity=0.093 Sum_probs=45.5
Q ss_pred CCeEEEEEecCCC---CccEEEEEEeccCCCCCCeEEEEEecCCCceeEeEEEeeCCc-EEEEEEeeC-CceEEEEEeCC
Q 018497 243 DGYLCVFATIPNN---TFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGK-IFIRGECRH-GGYGLLVYNPH 317 (355)
Q Consensus 243 ~G~L~~v~~~~~~---~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~-i~~~~~~~~-~~~~l~~yd~~ 317 (355)
+++||+....... ....=.||+++- ..+..+.+|+... ...-+.+..+|+ .++. ... ++ .|.++|.+
T Consensus 330 g~rlyVa~~~~~~gthk~~s~~VsVID~----~T~kvv~~I~vg~-~P~gia~spDg~~~lyv--~n~~s~-~VsVID~~ 401 (426)
T 3c75_H 330 SDRIYLLVDQRDEWKHKAASRFVVVLNA----ETGERINKIELGH-EIDSINVSQDAEPLLYA--LSAGTQ-TLHIYDAA 401 (426)
T ss_dssp GTEEEEEEEECCTTCTTSCEEEEEEEET----TTCCEEEEEEEEE-EECEEEECCSSSCEEEE--EETTTT-EEEEEETT
T ss_pred CCEEEEEecccccccccCCCCEEEEEEC----CCCeEEEEEECCC-CcCeEEEccCCCEEEEE--EcCCCC-eEEEEECC
Confidence 3688887653210 012456888885 4567777776543 133366677886 6665 322 45 69999999
Q ss_pred CCeEEE
Q 018497 318 SDTFKC 323 (355)
Q Consensus 318 t~~~~~ 323 (355)
|.+...
T Consensus 402 t~kvv~ 407 (426)
T 3c75_H 402 TGEELR 407 (426)
T ss_dssp TCCEEE
T ss_pred CCCEEE
Confidence 998754
No 160
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=65.67 E-value=59 Score=27.57 Aligned_cols=98 Identities=8% Similarity=-0.003 Sum_probs=0.0
Q ss_pred CCceeeEe-cCCCCCCCCCCceEEEEECCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEeEEEeeC
Q 018497 217 AKEIFQTV-MMPYDLSTDDADKYLNVFDGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTER 295 (355)
Q Consensus 217 ~~~~~~~i-~lP~~~~~~~~~~~L~~~~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~ 295 (355)
.++.+... .+. .+............++.+.+.+..++ .+.+|.+.... ...-..+..+.........+.+..+
T Consensus 3 ~~~~~~l~~~l~-gH~~~V~~l~~~~~~~~~l~s~s~D~----~v~~W~~~~~~-~~~~~~~~~~~~h~~~v~~~~~s~d 76 (319)
T 3frx_A 3 SNEVLVLRGTLE-GHNGWVTSLATSAGQPNLLLSASRDK----TLISWKLTGDD-QKFGVPVRSFKGHSHIVQDCTLTAD 76 (319)
T ss_dssp -CEEEEEEEEEC-CCSSCEEEEEECSSCTTEEEEEETTS----EEEEEEEEEET-TEEEEEEEEEECCSSCEEEEEECTT
T ss_pred cceEEEEEEEEc-cccceEEEEEccCCCccEEEEecCCc----cEEEecCCCCC-ccccccceEEeCCcccEEEEEECCC
Q ss_pred CcEEEEEEeeCCceEEEEEeCCCCeEEE
Q 018497 296 GKIFIRGECRHGGYGLLVYNPHSDTFKC 323 (355)
Q Consensus 296 g~i~~~~~~~~~~~~l~~yd~~t~~~~~ 323 (355)
|..++. ...++. +.+||+++++...
T Consensus 77 g~~l~s--~s~D~~-v~~wd~~~~~~~~ 101 (319)
T 3frx_A 77 GAYALS--ASWDKT-LRLWDVATGETYQ 101 (319)
T ss_dssp SSEEEE--EETTSE-EEEEETTTTEEEE
T ss_pred CCEEEE--EeCCCE-EEEEECCCCCeeE
No 161
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=65.46 E-value=71 Score=28.05 Aligned_cols=194 Identities=15% Similarity=0.158 Sum_probs=91.6
Q ss_pred eeCceEEEeecCCCCceEEEEcCCcccEEecCCCCCCCceeEEEEecCCCCCCcE-------EEE-EEcCCCceeEeccC
Q 018497 100 SCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDF-------KVV-YSLRSNSWKNIAYG 171 (355)
Q Consensus 100 s~~GLl~l~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~g~d~~~~~~~~y-------kvv-yss~t~~W~~~~~~ 171 (355)
+.+|-.++... .++.+.|||..+++....-..... ....+.+.|. .... .|. |+.+++.-...- .
T Consensus 132 s~dg~~l~s~~--~d~~i~iwd~~~~~~~~~~~~h~~-~v~~~~~~p~---~~~l~s~s~d~~v~iwd~~~~~~~~~~-~ 204 (393)
T 1erj_A 132 SPDGKFLATGA--EDRLIRIWDIENRKIVMILQGHEQ-DIYSLDYFPS---GDKLVSGSGDRTVRIWDLRTGQCSLTL-S 204 (393)
T ss_dssp CTTSSEEEEEE--TTSCEEEEETTTTEEEEEECCCSS-CEEEEEECTT---SSEEEEEETTSEEEEEETTTTEEEEEE-E
T ss_pred CCCCCEEEEEc--CCCeEEEEECCCCcEEEEEccCCC-CEEEEEEcCC---CCEEEEecCCCcEEEEECCCCeeEEEE-E
Confidence 44665555543 678899999998876543222111 1245555553 2211 111 666665433221 1
Q ss_pred CCceeeeccccccceeEe-CceEEEEEeeeccCCCCCCcEEEEEEcCCceee-EecCCCCCC---CCCCceEEEEE-CCe
Q 018497 172 FPRSIEINRSHINSSVFL-NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQ-TVMMPYDLS---TDDADKYLNVF-DGY 245 (355)
Q Consensus 172 ~p~~~~~~~~~~~~~v~~-~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~-~i~lP~~~~---~~~~~~~L~~~-~G~ 245 (355)
........ .+.- +|.+...+..+ ..|..+|+.+.... .+..+ ... .......+.-. +|+
T Consensus 205 ~~~~v~~~------~~~~~~~~~l~~~s~d--------~~v~iwd~~~~~~~~~~~~~-~~~~~~h~~~v~~v~~~~~g~ 269 (393)
T 1erj_A 205 IEDGVTTV------AVSPGDGKYIAAGSLD--------RAVRVWDSETGFLVERLDSE-NESGTGHKDSVYSVVFTRDGQ 269 (393)
T ss_dssp CSSCEEEE------EECSTTCCEEEEEETT--------SCEEEEETTTCCEEEEEC-------CCCSSCEEEEEECTTSS
T ss_pred cCCCcEEE------EEECCCCCEEEEEcCC--------CcEEEEECCCCcEEEeeccc-ccCCCCCCCCEEEEEECCCCC
Confidence 11110000 1111 55555544433 57889999876543 23222 111 11111223332 466
Q ss_pred EEEEEecCCCCccEEEEEEeccCCCCC------CeEEEEEecCCCceeEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCC
Q 018497 246 LCVFATIPNNTFRSYELWVMKEYGLTE------SWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSD 319 (355)
Q Consensus 246 L~~v~~~~~~~~~~l~iW~l~~~~~~~------~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~ 319 (355)
+.+.+..+ ..+.+|.++...... .......+.........+++..+|..++. ...++ .+.+||.+++
T Consensus 270 ~l~s~s~d----~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s--gs~D~-~v~iwd~~~~ 342 (393)
T 1erj_A 270 SVVSGSLD----RSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILS--GSKDR-GVLFWDKKSG 342 (393)
T ss_dssp EEEEEETT----SEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEE--EETTS-EEEEEETTTC
T ss_pred EEEEEeCC----CEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEE--EeCCC-eEEEEECCCC
Confidence 66666555 499999987532100 01111122111112444666667776666 43667 4999999988
Q ss_pred eEE
Q 018497 320 TFK 322 (355)
Q Consensus 320 ~~~ 322 (355)
+..
T Consensus 343 ~~~ 345 (393)
T 1erj_A 343 NPL 345 (393)
T ss_dssp CEE
T ss_pred eEE
Confidence 753
No 162
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=65.16 E-value=1.1e+02 Score=30.03 Aligned_cols=101 Identities=12% Similarity=0.190 Sum_probs=58.5
Q ss_pred cEEEEEEcCCceeeEecCCCCCCCCCCceEEEEE-CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCC---C
Q 018497 209 WLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF-DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKP---Q 284 (355)
Q Consensus 209 ~~Il~fD~~~~~~~~i~lP~~~~~~~~~~~L~~~-~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~---~ 284 (355)
..|..||..+++++.+..+ . ........+.+. +|.|.+... . .+ +.++.. +..|......... .
T Consensus 427 ~Gl~~~~~~~~~~~~~~~~-~-~~~~~v~~i~~d~~g~lwigt~--~----Gl--~~~~~~--~~~~~~~~~~~~~~~~~ 494 (781)
T 3v9f_A 427 GNISYYNTRLKKFQIIELE-K-NELLDVRVFYEDKNKKIWIGTH--A----GV--FVIDLA--SKKVIHHYDTSNSQLLE 494 (781)
T ss_dssp EEEEEECSSSCEEEECCST-T-TCCCCEEEEEECTTSEEEEEET--T----EE--EEEESS--SSSCCEEECTTTSSCSC
T ss_pred CCEEEEcCCCCcEEEeccC-C-CCCCeEEEEEECCCCCEEEEEC--C----ce--EEEeCC--CCeEEecccCccccccc
Confidence 3799999999999887532 1 111123344444 478877653 2 33 344321 2346554433211 1
Q ss_pred ceeEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEEEEE
Q 018497 285 RIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFKCIG 325 (355)
Q Consensus 285 ~~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~~~~v~ 325 (355)
.....+....+|.|.+. . .++ .|+.||+++++++.+.
T Consensus 495 ~~i~~i~~d~~g~lWig--t-~~~-Gl~~~~~~~~~~~~~~ 531 (781)
T 3v9f_A 495 NFVRSIAQDSEGRFWIG--T-FGG-GVGIYTPDMQLVRKFN 531 (781)
T ss_dssp SCEEEEEECTTCCEEEE--E-SSS-CEEEECTTCCEEEEEC
T ss_pred ceeEEEEEcCCCCEEEE--E-cCC-CEEEEeCCCCeEEEcc
Confidence 12444555667788887 5 434 3999999999887653
No 163
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=65.07 E-value=62 Score=27.19 Aligned_cols=94 Identities=3% Similarity=0.013 Sum_probs=54.9
Q ss_pred cEEEEEEcCCcee-eEecCCCCCCCCCCceEEE-EECCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCce
Q 018497 209 WLIVSFDFAKEIF-QTVMMPYDLSTDDADKYLN-VFDGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRI 286 (355)
Q Consensus 209 ~~Il~fD~~~~~~-~~i~lP~~~~~~~~~~~L~-~~~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~ 286 (355)
..|..+|+.+... ..+... ... ...+. .-+|++.+.+..+ ..+.+|.++.. .....+......
T Consensus 35 g~v~lWd~~~~~~~~~~~~~-~~~----v~~~~~~~~~~~l~s~s~d----~~i~vwd~~~~------~~~~~~~~h~~~ 99 (304)
T 2ynn_A 35 GRVELWNYETQVEVRSIQVT-ETP----VRAGKFIARKNWIIVGSDD----FRIRVFNYNTG------EKVVDFEAHPDY 99 (304)
T ss_dssp SEEEEEETTTTEEEEEEECC-SSC----EEEEEEEGGGTEEEEEETT----SEEEEEETTTC------CEEEEEECCSSC
T ss_pred CcEEEEECCCCceeEEeecc-CCc----EEEEEEeCCCCEEEEECCC----CEEEEEECCCC------cEEEEEeCCCCc
Confidence 5788899987654 233322 111 11222 2346666666655 49999988752 223333322223
Q ss_pred eEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCe
Q 018497 287 WWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDT 320 (355)
Q Consensus 287 ~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~ 320 (355)
...+++..++..++. ...++ .+..||++++.
T Consensus 100 v~~~~~~~~~~~l~s--gs~D~-~v~lWd~~~~~ 130 (304)
T 2ynn_A 100 IRSIAVHPTKPYVLS--GSDDL-TVKLWNWENNW 130 (304)
T ss_dssp EEEEEECSSSSEEEE--EETTS-CEEEEEGGGTT
T ss_pred EEEEEEcCCCCEEEE--ECCCC-eEEEEECCCCc
Confidence 556777777877776 43666 49999988763
No 164
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=64.98 E-value=64 Score=27.34 Aligned_cols=98 Identities=10% Similarity=0.020 Sum_probs=50.8
Q ss_pred cEEEEEEcCCceeeE-ecCCCCCCCCCCceEEEEECCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCC----
Q 018497 209 WLIVSFDFAKEIFQT-VMMPYDLSTDDADKYLNVFDGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKP---- 283 (355)
Q Consensus 209 ~~Il~fD~~~~~~~~-i~lP~~~~~~~~~~~L~~~~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~---- 283 (355)
..|..+|+.+.+... ++.+ .... ....+ .-+|+..++...+ ..+.+|-++. ......+...
T Consensus 164 ~~i~~~d~~~~~~~~~~~~~-~~~~--~~~~~-s~dg~~l~~~~~~----~~i~~~d~~~------~~~~~~~~~~~~~~ 229 (353)
T 3vgz_A 164 SVIWVVDGGNIKLKTAIQNT-GKMS--TGLAL-DSEGKRLYTTNAD----GELITIDTAD------NKILSRKKLLDDGK 229 (353)
T ss_dssp CEEEEEETTTTEEEEEECCC-CTTC--CCCEE-ETTTTEEEEECTT----SEEEEEETTT------TEEEEEEECCCSSS
T ss_pred ceEEEEcCCCCceEEEecCC-CCcc--ceEEE-CCCCCEEEEEcCC----CeEEEEECCC------CeEEEEEEcCCCCC
Confidence 579999998776643 3422 2111 11222 2245433333332 4666666543 2333333331
Q ss_pred CceeEeEEEeeCCc-EEEEEEeeCCceEEEEEeCCCCeEEE
Q 018497 284 QRIWWPLGFTERGK-IFIRGECRHGGYGLLVYNPHSDTFKC 323 (355)
Q Consensus 284 ~~~~~~~~~~~~g~-i~~~~~~~~~~~~l~~yd~~t~~~~~ 323 (355)
.....-+++..+|+ +|+. ...++ .+..||+++++...
T Consensus 230 ~~~~~~~~~s~dg~~l~~~--~~~~~-~v~~~d~~~~~~~~ 267 (353)
T 3vgz_A 230 EHFFINISLDTARQRAFIT--DSKAA-EVLVVDTRNGNILA 267 (353)
T ss_dssp CCCEEEEEEETTTTEEEEE--ESSSS-EEEEEETTTCCEEE
T ss_pred CcccceEEECCCCCEEEEE--eCCCC-EEEEEECCCCcEEE
Confidence 11233366677775 5555 42334 59999999887643
No 165
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=64.87 E-value=72 Score=27.88 Aligned_cols=104 Identities=10% Similarity=0.097 Sum_probs=57.9
Q ss_pred cEEEEEEcCCceeeE-ecCCCCCCCCCCceEEEE--ECCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCc
Q 018497 209 WLIVSFDFAKEIFQT-VMMPYDLSTDDADKYLNV--FDGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQR 285 (355)
Q Consensus 209 ~~Il~fD~~~~~~~~-i~lP~~~~~~~~~~~L~~--~~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~ 285 (355)
..|..+|+.+++-.. +...+..........+.. .++.+.+.+..++ .+.+|-+.... . .+..+.....
T Consensus 180 ~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~----~v~~wd~~~~~--~---~~~~~~~h~~ 250 (380)
T 3iz6_a 180 QTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDT----TVRLWDLRITS--R---AVRTYHGHEG 250 (380)
T ss_dssp SCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTS----CEEEEETTTTC--C---CCEEECCCSS
T ss_pred CcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCC----eEEEEECCCCC--c---ceEEECCcCC
Confidence 578899998776533 322201111111122222 2567777776664 99999987421 1 1122221111
Q ss_pred eeEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEEEE
Q 018497 286 IWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFKCI 324 (355)
Q Consensus 286 ~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~~~~v 324 (355)
....+.+..+|..++. ...++ .+.+||+++++...+
T Consensus 251 ~v~~v~~~p~~~~l~s--~s~D~-~i~lwd~~~~~~~~~ 286 (380)
T 3iz6_a 251 DINSVKFFPDGQRFGT--GSDDG-TCRLFDMRTGHQLQV 286 (380)
T ss_dssp CCCEEEECTTSSEEEE--ECSSS-CEEEEETTTTEEEEE
T ss_pred CeEEEEEecCCCeEEE--EcCCC-eEEEEECCCCcEEEE
Confidence 2445667778877777 43566 599999999875443
No 166
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=64.67 E-value=67 Score=27.49 Aligned_cols=73 Identities=10% Similarity=0.115 Sum_probs=43.2
Q ss_pred CCeEEEEEecCCCCccEEEEEEeccCCCCCCeE-EEEEecCCCceeEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeE
Q 018497 243 DGYLCVFATIPNNTFRSYELWVMKEYGLTESWT-KLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTF 321 (355)
Q Consensus 243 ~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~-~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~~ 321 (355)
+|++.+.+..+ ..+.||.+.......... ....+.........+++..++.+++. ...++ .+..||+++++.
T Consensus 38 d~~~l~sgs~D----~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s--~s~D~-~v~lwd~~~~~~ 110 (343)
T 2xzm_R 38 DSPVLISGSRD----KTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAIS--SSWDK-TLRLWDLRTGTT 110 (343)
T ss_dssp CCCEEEEEETT----SCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEE--EETTS-EEEEEETTSSCE
T ss_pred CCCEEEEEcCC----CEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEE--EcCCC-cEEEEECCCCcE
Confidence 56666666655 489999997532111122 22333222213455666777777776 43667 599999998765
Q ss_pred E
Q 018497 322 K 322 (355)
Q Consensus 322 ~ 322 (355)
.
T Consensus 111 ~ 111 (343)
T 2xzm_R 111 Y 111 (343)
T ss_dssp E
T ss_pred E
Confidence 3
No 167
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=64.27 E-value=67 Score=27.35 Aligned_cols=97 Identities=11% Similarity=0.077 Sum_probs=56.3
Q ss_pred cEEEEEEcCCceeeEe-cCCCCCCCCCCceEEEEE-CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCce
Q 018497 209 WLIVSFDFAKEIFQTV-MMPYDLSTDDADKYLNVF-DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRI 286 (355)
Q Consensus 209 ~~Il~fD~~~~~~~~i-~lP~~~~~~~~~~~L~~~-~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~ 286 (355)
..|..+|+.+.+-... ... .. ....+.-. +|++.+.+..+ ..+.||-++. . ..+..+......
T Consensus 144 g~v~i~~~~~~~~~~~~~~~-~~----~v~~~~~spdg~~lasg~~d----g~i~iwd~~~----~--~~~~~~~~h~~~ 208 (321)
T 3ow8_A 144 GKVNIFGVESGKKEYSLDTR-GK----FILSIAYSPDGKYLASGAID----GIINIFDIAT----G--KLLHTLEGHAMP 208 (321)
T ss_dssp SEEEEEETTTCSEEEEEECS-SS----CEEEEEECTTSSEEEEEETT----SCEEEEETTT----T--EEEEEECCCSSC
T ss_pred CcEEEEEcCCCceeEEecCC-Cc----eEEEEEECCCCCEEEEEcCC----CeEEEEECCC----C--cEEEEEcccCCc
Confidence 5788888876654322 221 11 11223322 46666666655 4899998764 1 334444432223
Q ss_pred eEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEEE
Q 018497 287 WWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFKC 323 (355)
Q Consensus 287 ~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~~~~ 323 (355)
...+++..+|.+++. ...++ .+.+||+++.+...
T Consensus 209 v~~l~~spd~~~l~s--~s~dg-~i~iwd~~~~~~~~ 242 (321)
T 3ow8_A 209 IRSLTFSPDSQLLVT--ASDDG-YIKIYDVQHANLAG 242 (321)
T ss_dssp CCEEEECTTSCEEEE--ECTTS-CEEEEETTTCCEEE
T ss_pred eeEEEEcCCCCEEEE--EcCCC-eEEEEECCCcceeE
Confidence 445677778877777 43566 49999998877543
No 168
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=64.17 E-value=65 Score=27.12 Aligned_cols=71 Identities=15% Similarity=0.179 Sum_probs=42.6
Q ss_pred CCe-EEEEEecCCCCccEEEEEEeccCCCCCCe-EEEEEecCCCceeEeEEEeeCCc-EEEEEEeeCCceEEEEEeCCCC
Q 018497 243 DGY-LCVFATIPNNTFRSYELWVMKEYGLTESW-TKLYTIEKPQRIWWPLGFTERGK-IFIRGECRHGGYGLLVYNPHSD 319 (355)
Q Consensus 243 ~G~-L~~v~~~~~~~~~~l~iW~l~~~~~~~~W-~~~~~i~~~~~~~~~~~~~~~g~-i~~~~~~~~~~~~l~~yd~~t~ 319 (355)
+|+ |++..... ..+.+|.++.. +. .....++... ...-+++..+|+ +++. . .....+.++|++++
T Consensus 186 dg~~l~v~~~~~----~~v~v~d~~~~----~~~~~~~~~~~~~-~~~~~~~spdg~~l~v~--~-~~~~~i~~~d~~~~ 253 (331)
T 3u4y_A 186 DGNFAFVANLIG----NSIGILETQNP----ENITLLNAVGTNN-LPGTIVVSRDGSTVYVL--T-ESTVDVFNFNQLSG 253 (331)
T ss_dssp TSSEEEEEETTT----TEEEEEECSST----TSCEEEEEEECSS-CCCCEEECTTSSEEEEE--C-SSEEEEEEEETTTT
T ss_pred CCCEEEEEeCCC----CeEEEEECCCC----cccceeeeccCCC-CCceEEECCCCCEEEEE--E-cCCCEEEEEECCCC
Confidence 365 55554433 58999988742 22 2244444332 233466778887 5555 4 33336999999999
Q ss_pred eEEEEE
Q 018497 320 TFKCIG 325 (355)
Q Consensus 320 ~~~~v~ 325 (355)
+++.+.
T Consensus 254 ~~~~~~ 259 (331)
T 3u4y_A 254 TLSFVK 259 (331)
T ss_dssp EEEEEE
T ss_pred ceeeec
Confidence 986664
No 169
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=64.10 E-value=38 Score=28.52 Aligned_cols=99 Identities=10% Similarity=0.074 Sum_probs=54.0
Q ss_pred EEEEEEcCCceeeEecCCCCCCCCCCceEEEEE-CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeE
Q 018497 210 LIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF-DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWW 288 (355)
Q Consensus 210 ~Il~fD~~~~~~~~i~lP~~~~~~~~~~~L~~~-~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~ 288 (355)
.|..+|+.+.+...+.++ .... ....+... +|+..++. + ..+.+|-++. ......+.... ...
T Consensus 220 ~v~~~d~~~~~~~~~~~~-~~~~--~~~~~~~s~dg~~l~~~--~----~~v~~~d~~~------~~~~~~~~~~~-~~~ 283 (337)
T 1pby_B 220 GLLTMDLETGEMAMREVR-IMDV--FYFSTAVNPAKTRAFGA--Y----NVLESFDLEK------NASIKRVPLPH-SYY 283 (337)
T ss_dssp EEEEEETTTCCEEEEEEE-ECSS--CEEEEEECTTSSEEEEE--E----SEEEEEETTT------TEEEEEEECSS-CCC
T ss_pred ceEEEeCCCCCceEeecC-CCCC--ceeeEEECCCCCEEEEe--C----CeEEEEECCC------CcCcceecCCC-cee
Confidence 688999998877644443 2211 11123332 35443333 2 4788887653 23334444332 133
Q ss_pred eEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeE-EEEEEe
Q 018497 289 PLGFTERGKIFIRGECRHGGYGLLVYNPHSDTF-KCIGVH 327 (355)
Q Consensus 289 ~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~~-~~v~~~ 327 (355)
.+++..+|+.++.. . .++ .+.+||+++++. ..+...
T Consensus 284 ~~~~s~dg~~l~~~-~-~~~-~i~v~d~~~~~~~~~~~~~ 320 (337)
T 1pby_B 284 SVNVSTDGSTVWLG-G-ALG-DLAAYDAETLEKKGQVDLP 320 (337)
T ss_dssp EEEECTTSCEEEEE-S-BSS-EEEEEETTTCCEEEEEECG
T ss_pred eEEECCCCCEEEEE-c-CCC-cEEEEECcCCcEEEEEEcC
Confidence 45667778655551 3 455 599999998875 444443
No 170
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=64.08 E-value=69 Score=27.41 Aligned_cols=200 Identities=10% Similarity=-0.032 Sum_probs=95.5
Q ss_pred eeCceEEEeecCCCCceEEEEcCCcccEEecCCCCCCCceeEEEEecCCCCCCcE-----EEE-EEcCCCceeEeccCCC
Q 018497 100 SCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDF-----KVV-YSLRSNSWKNIAYGFP 173 (355)
Q Consensus 100 s~~GLl~l~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~g~d~~~~~~~~y-----kvv-yss~t~~W~~~~~~~p 173 (355)
..+|.+++.+. ....++++||.+++...++.+. ...++.+++. ++-+ .|. |+..+++.+.+. ..+
T Consensus 58 ~~~~~l~~~d~--~~~~i~~~d~~~~~~~~~~~~~---~v~~i~~~~d---g~l~v~~~~gl~~~d~~~g~~~~~~-~~~ 128 (326)
T 2ghs_A 58 PASGTAWWFNI--LERELHELHLASGRKTVHALPF---MGSALAKISD---SKQLIASDDGLFLRDTATGVLTLHA-ELE 128 (326)
T ss_dssp TTTTEEEEEEG--GGTEEEEEETTTTEEEEEECSS---CEEEEEEEET---TEEEEEETTEEEEEETTTCCEEEEE-CSS
T ss_pred CCCCEEEEEEC--CCCEEEEEECCCCcEEEEECCC---cceEEEEeCC---CeEEEEECCCEEEEECCCCcEEEEe-eCC
Confidence 33466655553 4568999999998776554321 1234555553 2211 122 888888887664 222
Q ss_pred ceeeeccccccceeEeCceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEecCCCCCCCCCCceEEEEE-CC-eEEEEEe
Q 018497 174 RSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF-DG-YLCVFAT 251 (355)
Q Consensus 174 ~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i~lP~~~~~~~~~~~L~~~-~G-~L~~v~~ 251 (355)
......... ...+.-+|.+|+..... ........|..+| +.+...+. .... ..-.++.. +| .|+++..
T Consensus 129 ~~~~~~~~~-~i~~d~~G~l~v~~~~~--~~~~~~~~l~~~~--~g~~~~~~---~~~~--~~~~i~~s~dg~~lyv~~~ 198 (326)
T 2ghs_A 129 SDLPGNRSN-DGRMHPSGALWIGTMGR--KAETGAGSIYHVA--KGKVTKLF---ADIS--IPNSICFSPDGTTGYFVDT 198 (326)
T ss_dssp TTCTTEEEE-EEEECTTSCEEEEEEET--TCCTTCEEEEEEE--TTEEEEEE---EEES--SEEEEEECTTSCEEEEEET
T ss_pred CCCCCCCCC-CEEECCCCCEEEEeCCC--cCCCCceEEEEEe--CCcEEEee---CCCc--ccCCeEEcCCCCEEEEEEC
Confidence 110000000 00222368875543321 0011235788999 46655441 1100 11123333 45 4666543
Q ss_pred cCCCCccEEEEEEec-cCCCCCCeE--E-EEEecCCCceeEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEEEEEEe
Q 018497 252 IPNNTFRSYELWVMK-EYGLTESWT--K-LYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFKCIGVH 327 (355)
Q Consensus 252 ~~~~~~~~l~iW~l~-~~~~~~~W~--~-~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~~~~v~~~ 327 (355)
.. ..+.+|.++ +.+ .... + ...+........-+.+..+|.+++. ...++ .|..||++.+..+.+...
T Consensus 199 ~~----~~I~~~d~~~~~G--l~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva--~~~~~-~v~~~d~~g~~~~~i~~~ 269 (326)
T 2ghs_A 199 KV----NRLMRVPLDARTG--LPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNA--RWGEG-AVDRYDTDGNHIARYEVP 269 (326)
T ss_dssp TT----CEEEEEEBCTTTC--CBSSCCEEEEECTTSSSEEEEEEECTTSCEEEE--EETTT-EEEEECTTCCEEEEEECS
T ss_pred CC----CEEEEEEcccccC--CcccCceEEEECCCCCCCCCeeEECCCCCEEEE--EeCCC-EEEEECCCCCEEEEEECC
Confidence 32 356555554 111 0111 1 1222211112223455567788887 52345 499999977766766543
No 171
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=64.05 E-value=69 Score=27.40 Aligned_cols=111 Identities=8% Similarity=0.006 Sum_probs=59.1
Q ss_pred eCceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEe-cCCCCCCCCCCceEEEE--ECCeEEEEEecCCCCccEEEEEEe
Q 018497 189 LNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTV-MMPYDLSTDDADKYLNV--FDGYLCVFATIPNNTFRSYELWVM 265 (355)
Q Consensus 189 ~~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i-~lP~~~~~~~~~~~L~~--~~G~L~~v~~~~~~~~~~l~iW~l 265 (355)
.+|.+||..... ..|.++|+.......+ .-. .. ....++. .+|.|++..... .-.|+++
T Consensus 87 ~~~~ly~~d~~~--------~~I~~~~~~g~~~~~~~~~~---~~--~P~~iavdp~~g~ly~~d~~~-----~~~I~~~ 148 (316)
T 1ijq_A 87 IHSNIYWTDSVL--------GTVSVADTKGVKRKTLFREN---GS--KPRAIVVDPVHGFMYWTDWGT-----PAKIKKG 148 (316)
T ss_dssp TTTEEEEEETTT--------TEEEEEETTSSSEEEEEECT---TC--CEEEEEEETTTTEEEEEECSS-----SCEEEEE
T ss_pred cCCeEEEEECCC--------CEEEEEeCCCCceEEEEECC---CC--CcceEEeCCCCCEEEEEccCC-----CCeEEEE
Confidence 378999987654 6899999987654443 211 11 1233444 368888876432 1235565
Q ss_pred ccCCCCCCeEEEEEecCCCceeEeEEEee-CCcEEEEEEeeCCceEEEEEeCCCCeEEEE
Q 018497 266 KEYGLTESWTKLYTIEKPQRIWWPLGFTE-RGKIFIRGECRHGGYGLLVYNPHSDTFKCI 324 (355)
Q Consensus 266 ~~~~~~~~W~~~~~i~~~~~~~~~~~~~~-~g~i~~~~~~~~~~~~l~~yd~~t~~~~~v 324 (355)
+-.+. -.+.. +........-+++.. ++.||+. ..... .+..+|++.+..+.+
T Consensus 149 ~~dG~---~~~~~-~~~~~~~P~gla~d~~~~~lY~~--D~~~~-~I~~~d~dg~~~~~~ 201 (316)
T 1ijq_A 149 GLNGV---DIYSL-VTENIQWPNGITLDLLSGRLYWV--DSKLH-SISSIDVNGGNRKTI 201 (316)
T ss_dssp ETTSC---CEEEE-ECSSCSCEEEEEEETTTTEEEEE--ETTTT-EEEEEETTSCSCEEE
T ss_pred cCCCC---CeEEE-EECCCCCceEEEEeccCCEEEEE--ECCCC-eEEEEecCCCceEEE
Confidence 53221 12211 111110122344443 4578877 52334 589999987665555
No 172
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=63.35 E-value=70 Score=27.25 Aligned_cols=69 Identities=7% Similarity=-0.045 Sum_probs=36.7
Q ss_pred EEEECCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCc--eeEeEEEee--CCcEEEEEEeeCCceEEEEE
Q 018497 239 LNVFDGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQR--IWWPLGFTE--RGKIFIRGECRHGGYGLLVY 314 (355)
Q Consensus 239 L~~~~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~--~~~~~~~~~--~g~i~~~~~~~~~~~~l~~y 314 (355)
+.-..+.+.+....+ ..+.||.... ..|.........+. ....+++.. ++.+++. ...++ .+..|
T Consensus 256 v~~s~~~~l~s~~~d----g~v~iw~~~~----~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las--~s~Dg-~v~~W 324 (330)
T 2hes_X 256 VAWGFNGLIASVGAD----GVLAVYEEVD----GEWKVFAKRALCHGVYEINVVKWLELNGKTILAT--GGDDG-IVNFW 324 (330)
T ss_dssp EEECTTSCEEEEETT----SCEEEEEEET----TEEEEEEEESCTTTTSCEEEEEEC-----CCEEE--EETTS-EEEEE
T ss_pred EEEcCCCEEEEEeCC----CEEEEEEcCC----CceEEEeccccccccceEEEEEEecCCCceEEEE--ecCCC-cEEEE
Confidence 333345544444444 4899999874 45766554422221 234455554 4666666 43677 49999
Q ss_pred eCCC
Q 018497 315 NPHS 318 (355)
Q Consensus 315 d~~t 318 (355)
|+++
T Consensus 325 ~~~~ 328 (330)
T 2hes_X 325 SLEK 328 (330)
T ss_dssp EC--
T ss_pred Eecc
Confidence 9875
No 173
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=62.99 E-value=53 Score=27.68 Aligned_cols=29 Identities=3% Similarity=-0.125 Sum_probs=16.7
Q ss_pred CceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEecCC
Q 018497 190 NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMP 227 (355)
Q Consensus 190 ~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i~lP 227 (355)
+|.+|.-... ..|.+||...+......++
T Consensus 147 ~g~l~vgt~~---------~~l~~~d~~g~~~~~~~~~ 175 (330)
T 3hxj_A 147 DGTIYVGSND---------NYLYAINPDGTEKWRFKTN 175 (330)
T ss_dssp TSCEEEECTT---------SEEEEECTTSCEEEEEECS
T ss_pred CCEEEEEcCC---------CEEEEECCCCCEeEEEecC
Confidence 6776654332 4899999984333333433
No 174
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=62.87 E-value=75 Score=27.45 Aligned_cols=90 Identities=10% Similarity=0.086 Sum_probs=49.9
Q ss_pred cEEEEEEcCCceeeEe-cCCCCCCCCCCce-EEEE-ECCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCc
Q 018497 209 WLIVSFDFAKEIFQTV-MMPYDLSTDDADK-YLNV-FDGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQR 285 (355)
Q Consensus 209 ~~Il~fD~~~~~~~~i-~lP~~~~~~~~~~-~L~~-~~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~ 285 (355)
..|-.+|+.+.+-..+ ... ... ... .+.- .+|++.+++..+ ..+.||.+... ..+..+.....
T Consensus 262 ~~v~lwd~~~~~~~~~~~~~-~~~---~~~~~~~~s~~g~~l~~g~~d----~~i~vwd~~~~------~~~~~l~~h~~ 327 (354)
T 2pbi_B 262 ATCRLYDLRADREVAIYSKE-SII---FGASSVDFSLSGRLLFAGYND----YTINVWDVLKG------SRVSILFGHEN 327 (354)
T ss_dssp SCEEEEETTTTEEEEEECCT-TCC---SCEEEEEECTTSSEEEEEETT----SCEEEEETTTC------SEEEEECCCSS
T ss_pred CeEEEEECCCCcEEEEEcCC-Ccc---cceeEEEEeCCCCEEEEEECC----CcEEEEECCCC------ceEEEEECCCC
Confidence 5788899987654332 222 111 111 2222 247777766665 48999987641 23333332221
Q ss_pred eeEeEEEeeCCcEEEEEEeeCCceEEEEEe
Q 018497 286 IWWPLGFTERGKIFIRGECRHGGYGLLVYN 315 (355)
Q Consensus 286 ~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd 315 (355)
....+++..+|..++. ...++ .+.+||
T Consensus 328 ~v~~l~~spdg~~l~s--gs~D~-~v~vW~ 354 (354)
T 2pbi_B 328 RVSTLRVSPDGTAFCS--GSWDH-TLRVWA 354 (354)
T ss_dssp CEEEEEECTTSSCEEE--EETTS-EEEEEC
T ss_pred cEEEEEECCCCCEEEE--EcCCC-CEEecC
Confidence 3556777778876666 43566 477664
No 175
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=62.70 E-value=44 Score=31.79 Aligned_cols=120 Identities=15% Similarity=0.213 Sum_probs=59.8
Q ss_pred eeEeCceEEEEEeeeccCCCCCCcEEEEEEcCCc--eeeEe-cCCCCCCC---CCCceEEEEECCeEEEEEecCCCCccE
Q 018497 186 SVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKE--IFQTV-MMPYDLST---DDADKYLNVFDGYLCVFATIPNNTFRS 259 (355)
Q Consensus 186 ~v~~~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~--~~~~i-~lP~~~~~---~~~~~~L~~~~G~L~~v~~~~~~~~~~ 259 (355)
+++.+|.+|...... .+.++|..+. .|+.- ..| .... +.....++..+|+|++.... ..
T Consensus 64 P~v~~g~vyv~~~~~---------~v~AlD~~tG~~~W~~~~~~~-~~~~~~~~~~~~g~a~~~~~v~~~t~d-----g~ 128 (582)
T 1flg_A 64 AIVSDGVIYVTASYS---------RLFALDAKTGKRLWTYNHRLP-DDIRPCCDVVNRGAAIYGDKVFFGTLD-----AS 128 (582)
T ss_dssp CEEETTEEEEEETTT---------EEEEEESSSCCEEEEEECCCC-TTCCCSSCSCCCCCEEETTEEEEEETT-----TE
T ss_pred cEEECCEEEEEcCCC---------CEEEEECCCCcEEEEEcCCCC-cccccccccCCCccEEECCEEEEEeCC-----CE
Confidence 788999999987644 4999998644 56653 333 1110 00011234567777665432 13
Q ss_pred EEEEEeccCCCCCCeEEEEEecCC--CceeEeEEEee--CCc-EEEEEEee-----CCceEEEEEeCCCCeEEEE
Q 018497 260 YELWVMKEYGLTESWTKLYTIEKP--QRIWWPLGFTE--RGK-IFIRGECR-----HGGYGLLVYNPHSDTFKCI 324 (355)
Q Consensus 260 l~iW~l~~~~~~~~W~~~~~i~~~--~~~~~~~~~~~--~g~-i~~~~~~~-----~~~~~l~~yd~~t~~~~~v 324 (355)
+..++-...+..|.....-... .....|+.... +|+ +++++ .. .++ .++.||.+|++....
T Consensus 129 --l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg-~~~~e~~~~g-~v~alD~~tG~~~W~ 199 (582)
T 1flg_A 129 --VVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHG-SSGDEFGVVG-RLFARDPDTGEEIWM 199 (582)
T ss_dssp --EEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEEC-CBCGGGCCBC-EEEEECTTTCCEEEE
T ss_pred --EEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEe-ccccccCCCC-EEEEEECCCCCEEee
Confidence 3344432223456643211000 00123443322 232 44441 20 134 599999999887653
No 176
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=62.49 E-value=87 Score=28.03 Aligned_cols=66 Identities=0% Similarity=-0.016 Sum_probs=39.8
Q ss_pred CeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEE
Q 018497 244 GYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFK 322 (355)
Q Consensus 244 G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~~~ 322 (355)
|++.+.+..+ ..+.||.++.. .-.......... ....+++. +|..++. ...++ .+.+||+++++..
T Consensus 210 ~~~l~s~~~d----~~i~vwd~~~~----~~~~~~~~~h~~-~v~~~~~s-d~~~l~s--~~~d~-~v~vwd~~~~~~~ 275 (450)
T 2vdu_B 210 HQFIITSDRD----EHIKISHYPQC----FIVDKWLFGHKH-FVSSICCG-KDYLLLS--AGGDD-KIFAWDWKTGKNL 275 (450)
T ss_dssp CEEEEEEETT----SCEEEEEESCT----TCEEEECCCCSS-CEEEEEEC-STTEEEE--EESSS-EEEEEETTTCCEE
T ss_pred CcEEEEEcCC----CcEEEEECCCC----ceeeeeecCCCC-ceEEEEEC-CCCEEEE--EeCCC-eEEEEECCCCcEe
Confidence 6666666555 48999998752 111111111111 34556667 7877777 43666 5999999998753
No 177
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=61.98 E-value=77 Score=27.27 Aligned_cols=110 Identities=11% Similarity=-0.014 Sum_probs=58.5
Q ss_pred CceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEecCCCCCCCCCCceEEEEE--CCeEEEEEecCCCCccEEEEEEecc
Q 018497 190 NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF--DGYLCVFATIPNNTFRSYELWVMKE 267 (355)
Q Consensus 190 ~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i~lP~~~~~~~~~~~L~~~--~G~L~~v~~~~~~~~~~l~iW~l~~ 267 (355)
+|.+||..... ...|..+|++...-+.+- . .... ..-.|+.. +|+||++..... . |+..+-
T Consensus 133 ~g~ly~td~~~-------~~~I~r~~~dG~~~~~~~-~-~~l~--~Pnglavd~~~~~lY~aD~~~~----~--I~~~d~ 195 (318)
T 3sov_A 133 SGFMYWTDWGE-------VPKIERAGMDGSSRFIII-N-SEIY--WPNGLTLDYEEQKLYWADAKLN----F--IHKSNL 195 (318)
T ss_dssp GTEEEEEECSS-------SCEEEEEETTSCSCEEEE-C-SSCS--CEEEEEEETTTTEEEEEETTTT----E--EEEEET
T ss_pred CCEEEEEecCC-------CCEEEEEEcCCCCeEEEE-E-CCCC--CccEEEEeccCCEEEEEECCCC----E--EEEEcC
Confidence 58999987431 258999999764433331 1 1111 12234544 688998876432 4 445543
Q ss_pred CCCCCCeEEEEEecCCCceeEeEEEee-CCcEEEEEEeeCCceEEEEEeCCCCeE-EEEE
Q 018497 268 YGLTESWTKLYTIEKPQRIWWPLGFTE-RGKIFIRGECRHGGYGLLVYNPHSDTF-KCIG 325 (355)
Q Consensus 268 ~~~~~~W~~~~~i~~~~~~~~~~~~~~-~g~i~~~~~~~~~~~~l~~yd~~t~~~-~~v~ 325 (355)
.+... .... . .. ...|.+++- ++.+|+. ....+ .+..+|+.+++. +.+.
T Consensus 196 dG~~~--~~~~--~-~~-~~~P~glav~~~~lywt--d~~~~-~V~~~~~~~G~~~~~i~ 246 (318)
T 3sov_A 196 DGTNR--QAVV--K-GS-LPHPFALTLFEDILYWT--DWSTH-SILACNKYTGEGLREIH 246 (318)
T ss_dssp TSCSC--EEEE--C-SC-CSCEEEEEEETTEEEEE--ETTTT-EEEEEETTTCCSCEEEE
T ss_pred CCCce--EEEe--c-CC-CCCceEEEEeCCEEEEE--ecCCC-eEEEEECCCCCceEEEe
Confidence 22111 1111 1 11 234555443 4467777 52344 699999976654 4443
No 178
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=61.49 E-value=80 Score=27.31 Aligned_cols=62 Identities=11% Similarity=0.107 Sum_probs=38.6
Q ss_pred cEEEEEEeccCCCCCCeEEEEEecCCCceeEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEEEE
Q 018497 258 RSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFKCI 324 (355)
Q Consensus 258 ~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~~~~v 324 (355)
..++||.++... ..........-.......+++..+|+.++. ...++ .+.+||+++++....
T Consensus 103 g~v~lWd~~~~~--~~~~~~~~~~~H~~~V~~v~~spdg~~l~s--gs~d~-~i~iwd~~~~~~~~~ 164 (344)
T 4gqb_B 103 GAVELWELDENE--TLIVSKFCKYEHDDIVSTVSVLSSGTQAVS--GSKDI-CIKVWDLAQQVVLSS 164 (344)
T ss_dssp SEEEEEEECTTS--SCEEEEEEEECCSSCEEEEEECTTSSEEEE--EETTS-CEEEEETTTTEEEEE
T ss_pred CEEEEEeccCCC--ceeEeeccccCCCCCEEEEEECCCCCEEEE--EeCCC-eEEEEECCCCcEEEE
Confidence 499999998632 223333322211113556777788877777 43666 499999999876443
No 179
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=60.68 E-value=1e+02 Score=28.35 Aligned_cols=98 Identities=11% Similarity=0.118 Sum_probs=55.0
Q ss_pred cEEEEEEcCCceeeEecCCCCCCCCCCceEEEEE-CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCcee
Q 018497 209 WLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF-DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIW 287 (355)
Q Consensus 209 ~~Il~fD~~~~~~~~i~lP~~~~~~~~~~~L~~~-~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~ 287 (355)
..|..+|...+....+.-+ .. ....+.-. +|++.+....+ ..+.+|.++. ..+..+.......
T Consensus 407 ~~v~~~~~~~~~~~~~~~~-~~----~v~~~~~s~d~~~l~~~~~d----~~v~~w~~~~-------~~~~~~~~~~~~v 470 (577)
T 2ymu_A 407 KTVKLWNRNGQLLQTLTGH-SS----SVWGVAFSPDDQTIASASDD----KTVKLWNRNG-------QLLQTLTGHSSSV 470 (577)
T ss_dssp SEEEEECTTCCEEEEEECC-SS----CEEEEEECTTSSEEEEEETT----SEEEEEETTS-------CEEEEEECCSSCE
T ss_pred CEEEEEeCCCCEEEEecCC-CC----CeEEEEECCCCCEEEEEcCC----CEEEEEECCC-------CEEEEEcCCCCCE
Confidence 4788888766655554322 11 11223333 36665555554 4899997542 1223333222234
Q ss_pred EeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEEEEE
Q 018497 288 WPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFKCIG 325 (355)
Q Consensus 288 ~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~~~~v~ 325 (355)
..+++..+|++++. ...++ .+.+||...+..+.+.
T Consensus 471 ~~~~~spd~~~las--~~~d~-~i~iw~~~~~~~~~~~ 505 (577)
T 2ymu_A 471 RGVAFSPDGQTIAS--ASDDK-TVKLWNRNGQLLQTLT 505 (577)
T ss_dssp EEEEECTTSCEEEE--EETTS-EEEEEETTSCEEEEEE
T ss_pred EEEEEcCCCCEEEE--EeCCC-EEEEEcCCCCEEEEEe
Confidence 55677778877776 43566 4889997766665553
No 180
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=60.55 E-value=86 Score=27.38 Aligned_cols=70 Identities=7% Similarity=-0.033 Sum_probs=42.4
Q ss_pred CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCc-eeEeEEEeeCCc-EEEEEEeeCCceEEEEEeCCCCe
Q 018497 243 DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQR-IWWPLGFTERGK-IFIRGECRHGGYGLLVYNPHSDT 320 (355)
Q Consensus 243 ~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~-~~~~~~~~~~g~-i~~~~~~~~~~~~l~~yd~~t~~ 320 (355)
+|++.+++..+ ..+.+|.+... .....+..... ....+.+..+|. +++. ...++ .+.+||+++++
T Consensus 258 ~~~~l~~~~~d----g~i~i~d~~~~------~~~~~~~~~~~~~v~~~~~~~~~~~~l~~--g~~dg-~i~vwd~~~~~ 324 (420)
T 3vl1_A 258 YGKYVIAGHVS----GVITVHNVFSK------EQTIQLPSKFTCSCNSLTVDGNNANYIYA--GYENG-MLAQWDLRSPE 324 (420)
T ss_dssp TTEEEEEEETT----SCEEEEETTTC------CEEEEECCTTSSCEEEEEECSSCTTEEEE--EETTS-EEEEEETTCTT
T ss_pred CCCEEEEEcCC----CeEEEEECCCC------ceeEEcccccCCCceeEEEeCCCCCEEEE--EeCCC-eEEEEEcCCCc
Confidence 46666666655 48999988642 23333332211 345566677776 7776 43567 49999999864
Q ss_pred --EEEEE
Q 018497 321 --FKCIG 325 (355)
Q Consensus 321 --~~~v~ 325 (355)
+..+.
T Consensus 325 ~~~~~~~ 331 (420)
T 3vl1_A 325 CPVGEFL 331 (420)
T ss_dssp SCSEEEE
T ss_pred Cchhhhh
Confidence 34444
No 181
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=60.43 E-value=84 Score=27.17 Aligned_cols=94 Identities=9% Similarity=0.014 Sum_probs=55.4
Q ss_pred cEEEEEEcCCceeeEecCCCCCCCCCCceEEEEE-CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCcee
Q 018497 209 WLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF-DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIW 287 (355)
Q Consensus 209 ~~Il~fD~~~~~~~~i~lP~~~~~~~~~~~L~~~-~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~ 287 (355)
..|..+|+.++....+... ..... ....+.-. +|++.++...+ ..+.+|.++. + ....+.......
T Consensus 141 ~~i~iwd~~~~~~~~~~~~-~~~~~-~v~~~~~~~~~~~l~~~~~d----~~i~i~d~~~---~----~~~~~~~h~~~v 207 (383)
T 3ei3_B 141 GATTLRDFSGSVIQVFAKT-DSWDY-WYCCVDVSVSRQMLATGDST----GRLLLLGLDG---H----EIFKEKLHKAKV 207 (383)
T ss_dssp TEEEEEETTSCEEEEEECC-CCSSC-CEEEEEEETTTTEEEEEETT----SEEEEEETTS---C----EEEEEECSSSCE
T ss_pred CEEEEEECCCCceEEEecc-CCCCC-CeEEEEECCCCCEEEEECCC----CCEEEEECCC---C----EEEEeccCCCcE
Confidence 5899999998877776433 22111 12233333 46666666555 4999999842 1 223332222135
Q ss_pred EeEEEeeCCc-EEEEEEeeCCceEEEEEeCCC
Q 018497 288 WPLGFTERGK-IFIRGECRHGGYGLLVYNPHS 318 (355)
Q Consensus 288 ~~~~~~~~g~-i~~~~~~~~~~~~l~~yd~~t 318 (355)
..+.+..++. +++. ...++ .+.+||+++
T Consensus 208 ~~~~~~~~~~~~l~s--~~~d~-~i~iwd~~~ 236 (383)
T 3ei3_B 208 THAEFNPRCDWLMAT--SSVDA-TVKLWDLRN 236 (383)
T ss_dssp EEEEECSSCTTEEEE--EETTS-EEEEEEGGG
T ss_pred EEEEECCCCCCEEEE--EeCCC-EEEEEeCCC
Confidence 5566677776 6666 43566 499999987
No 182
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=59.85 E-value=1.1e+02 Score=28.33 Aligned_cols=95 Identities=6% Similarity=0.042 Sum_probs=55.7
Q ss_pred cEEEEEEcCCceeeEecCCCCCCCCCCceEEEEE-CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecC-CCce
Q 018497 209 WLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF-DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEK-PQRI 286 (355)
Q Consensus 209 ~~Il~fD~~~~~~~~i~lP~~~~~~~~~~~L~~~-~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~-~~~~ 286 (355)
..|..+|+.+.+.....+. .... ....+.-. +|++.++...+ ..+.||.++. ...+..+.. ....
T Consensus 467 ~~i~~~~~~~~~~~~~~~~-~~~~--~v~~~~~s~~g~~l~~~~~d----g~i~iw~~~~------~~~~~~~~~~h~~~ 533 (615)
T 1pgu_A 467 NTIQVFKLSDLEVSFDLKT-PLRA--KPSYISISPSETYIAAGDVM----GKILLYDLQS------REVKTSRWAFRTSK 533 (615)
T ss_dssp SCEEEEETTEEEEEEECSS-CCSS--CEEEEEECTTSSEEEEEETT----SCEEEEETTT------TEEEECCSCCCSSC
T ss_pred CeEEEEECCCccccccccC-CccC--ceEEEEECCCCCEEEEcCCC----CeEEEeeCCC------CcceeEeecCCCCc
Confidence 4788899888766432222 2111 12233333 57766666655 4899998874 233333332 1113
Q ss_pred eEeEEEee----------CCcEEEEEEeeCCceEEEEEeCCCC
Q 018497 287 WWPLGFTE----------RGKIFIRGECRHGGYGLLVYNPHSD 319 (355)
Q Consensus 287 ~~~~~~~~----------~g~i~~~~~~~~~~~~l~~yd~~t~ 319 (355)
...+.+.. +|.+++. ...++ .+..||++++
T Consensus 534 v~~~~~sp~~~~~~~~~~~~~~l~~--~~~dg-~i~iw~~~~~ 573 (615)
T 1pgu_A 534 INAISWKPAEKGANEEEIEEDLVAT--GSLDT-NIFIYSVKRP 573 (615)
T ss_dssp EEEEEECCCC------CCSCCEEEE--EETTS-CEEEEESSCT
T ss_pred eeEEEEcCccccccccccCCCEEEE--EcCCC-cEEEEECCCC
Confidence 45566666 7877777 43667 4999999986
No 183
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=59.79 E-value=84 Score=26.96 Aligned_cols=73 Identities=12% Similarity=0.207 Sum_probs=40.4
Q ss_pred CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCc---eeEeEEEeeCCc-EEEEEEeeC-CceEEEEEeC-
Q 018497 243 DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQR---IWWPLGFTERGK-IFIRGECRH-GGYGLLVYNP- 316 (355)
Q Consensus 243 ~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~---~~~~~~~~~~g~-i~~~~~~~~-~~~~l~~yd~- 316 (355)
+|+..++..... ..+.+|.++. ........+..... ...-+++..+|+ +|+. ... ++ .+.+|++
T Consensus 221 dg~~l~v~~~~~---~~v~v~~~~~----g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~--~~~~~~-~i~v~~~~ 290 (361)
T 3scy_A 221 DGKFAYLINEIG---GTVIAFRYAD----GMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYAS--NRLKAD-GVAIFKVD 290 (361)
T ss_dssp TSSEEEEEETTT---CEEEEEEEET----TEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEE--ECSSSC-EEEEEEEC
T ss_pred CCCEEEEEcCCC---CeEEEEEecC----CceEEeEEEecCCCCCCCcccEEECCCCCEEEEE--CCCCCC-EEEEEEEc
Confidence 466444444333 5899999883 34555555543221 233466777886 4454 423 24 4777766
Q ss_pred -CCCeEEEEE
Q 018497 317 -HSDTFKCIG 325 (355)
Q Consensus 317 -~t~~~~~v~ 325 (355)
++++++.+.
T Consensus 291 ~~~g~~~~~~ 300 (361)
T 3scy_A 291 ETNGTLTKVG 300 (361)
T ss_dssp TTTCCEEEEE
T ss_pred CCCCcEEEee
Confidence 467766553
No 184
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=59.54 E-value=89 Score=27.18 Aligned_cols=64 Identities=6% Similarity=0.144 Sum_probs=36.7
Q ss_pred CeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCC------CceeEeEEEeeCC-cEEEEEEeeCCc--eEEEEE
Q 018497 244 GYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKP------QRIWWPLGFTERG-KIFIRGECRHGG--YGLLVY 314 (355)
Q Consensus 244 G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~------~~~~~~~~~~~~g-~i~~~~~~~~~~--~~l~~y 314 (355)
+.+.+....+ ..+.+|.++. . .....+... ......+.+..+| .+++. ...++ ..+..|
T Consensus 178 ~~~l~~~~~d----g~v~iwd~~~----~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~--~~~d~~~~~i~~~ 245 (416)
T 2pm9_A 178 AHVFASAGSS----NFASIWDLKA----K--KEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVAT--ATGSDNDPSILIW 245 (416)
T ss_dssp TTEEEEESSS----SCEEEEETTT----T--EEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEE--EECCSSSCCCCEE
T ss_pred CcEEEEEcCC----CCEEEEECCC----C--CcceEEeccccccccCCceEEEEECCCCCCEEEE--EECCCCCceEEEE
Confidence 4666655554 4899998875 1 233344332 1134556666666 56665 32343 038899
Q ss_pred eCCCC
Q 018497 315 NPHSD 319 (355)
Q Consensus 315 d~~t~ 319 (355)
|+++.
T Consensus 246 d~~~~ 250 (416)
T 2pm9_A 246 DLRNA 250 (416)
T ss_dssp ETTST
T ss_pred eCCCC
Confidence 98874
No 185
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=59.08 E-value=99 Score=27.58 Aligned_cols=127 Identities=11% Similarity=0.032 Sum_probs=64.9
Q ss_pred CceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEecCCCCCCCCCCceEEEEE--CCeEEEEEecCCCCccEEEEEEecc
Q 018497 190 NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF--DGYLCVFATIPNNTFRSYELWVMKE 267 (355)
Q Consensus 190 ~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i~lP~~~~~~~~~~~L~~~--~G~L~~v~~~~~~~~~~l~iW~l~~ 267 (355)
+|.|||..... ...|..+|++...-..+-- .... ..-.|+.. +|+||++..... .|+..+-
T Consensus 213 ~g~ly~td~~~-------~~~I~~~~~dG~~~~~~~~--~~l~--~P~glavd~~~~~lY~aD~~~~------~I~~~d~ 275 (400)
T 3p5b_L 213 HGFMYWTDWGT-------PAKIKKGGLNGVDIYSLVT--ENIQ--WPNGITLDLLSGRLYWVDSKLH------SISSIDV 275 (400)
T ss_dssp TTEEEEEECSS-------SCCEEEEETTSCSCEEEEC--SSCS--CEEEEEEETTTTEEEEEETTTT------EEEEEET
T ss_pred cCeEEEEeCCC-------CCEEEEEeCCCCccEEEEE--CCCC--ceEEEEEEeCCCEEEEEECCCC------EEEEEeC
Confidence 68999987542 2479999998654444311 1111 22334544 688999875432 3556654
Q ss_pred CCCCCCeEEEEEecCCCceeEeEEEe-eCCcEEEEEEeeCCceEEEEEeCCCCeE-EEEEEecCcceeEEeeeecc
Q 018497 268 YGLTESWTKLYTIEKPQRIWWPLGFT-ERGKIFIRGECRHGGYGLLVYNPHSDTF-KCIGVHLPYYAIQVLNFVES 341 (355)
Q Consensus 268 ~~~~~~W~~~~~i~~~~~~~~~~~~~-~~g~i~~~~~~~~~~~~l~~yd~~t~~~-~~v~~~~~~~~~~~~~y~~S 341 (355)
.+. ..... .... .. ...|.+++ .++.||+. . .....|..+|..+++. +.+. .+...-..+.+|.+.
T Consensus 276 dG~-~~~~~-~~~~-~~-l~~P~gl~v~~~~lywt--d-~~~~~V~~~~~~~G~~~~~i~-~~~~~p~~i~v~~~~ 343 (400)
T 3p5b_L 276 NGG-NRKTI-LEDE-KR-LAHPFSLAVFEDKVFWT--D-IINEAIFSANRLTGSDVNLLA-ENLLSPEDMVLFHNL 343 (400)
T ss_dssp TSC-CCEEE-EECS-ST-TSSEEEEEEETTEEEEE--E-SSSCSEEEEESSSCCCCEEEE-CSCSCEEEEEEESGG
T ss_pred CCC-ccEEE-EeCC-CC-CCCCEEEEEeCCEEEEe--c-CCCCeEEEEEcCCCCceEEEe-cCCCCCceEEEEeec
Confidence 332 22222 1111 11 23455554 34478877 5 3333599999766643 4443 222222334445443
No 186
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=59.01 E-value=91 Score=27.16 Aligned_cols=72 Identities=19% Similarity=0.380 Sum_probs=42.2
Q ss_pred CeEEEEEecCCC----CccEEEEEEeccCCCCCCeEEEEEecCCCceeEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCC
Q 018497 244 GYLCVFATIPNN----TFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSD 319 (355)
Q Consensus 244 G~L~~v~~~~~~----~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~ 319 (355)
++++++...... ....-.||+.+- .....+.+++... ..-+++..+|+.++. . ..+ .+.+||.+|+
T Consensus 266 ~~lyv~~~~~~~~~~~~~~~~~v~viD~----~t~~~v~~i~~~~--p~~ia~spdg~~l~v--~-n~~-~v~v~D~~t~ 335 (361)
T 2oiz_A 266 GRMYVFMHPDGKEGTHKFPAAEIWVMDT----KTKQRVARIPGRD--ALSMTIDQQRNLMLT--L-DGG-NVNVYDISQP 335 (361)
T ss_dssp TEEEEEEESSCCTTCTTCCCSEEEEEET----TTTEEEEEEECTT--CCEEEEETTTTEEEE--E-CSS-CEEEEECSSS
T ss_pred CeEEEEEccCCCcccccCCCceEEEEEC----CCCcEEEEEecCC--eeEEEECCCCCEEEE--e-CCC-eEEEEECCCC
Confidence 677776551110 001234555553 2346677777655 445677888865555 4 334 5999999999
Q ss_pred eEEEEE
Q 018497 320 TFKCIG 325 (355)
Q Consensus 320 ~~~~v~ 325 (355)
+++.+.
T Consensus 336 ~l~~~~ 341 (361)
T 2oiz_A 336 EPKLLR 341 (361)
T ss_dssp SCEEEE
T ss_pred cceeeE
Confidence 555553
No 187
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=58.11 E-value=1e+02 Score=27.32 Aligned_cols=65 Identities=15% Similarity=0.257 Sum_probs=40.5
Q ss_pred CeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeE
Q 018497 244 GYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTF 321 (355)
Q Consensus 244 G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~~ 321 (355)
|.+.+.+..+ ..+.+|-+... .....+.........+.+..+|..++. ...++ .+.+||.++++.
T Consensus 308 g~~l~sgs~D----~~i~iwd~~~~------~~~~~~~~h~~~v~~v~~~~~g~~l~s--~s~D~-~i~vwd~~~~~~ 372 (410)
T 1vyh_C 308 GPFLLSGSRD----KTIKMWDVSTG------MCLMTLVGHDNWVRGVLFHSGGKFILS--CADDK-TLRVWDYKNKRC 372 (410)
T ss_dssp CCEEEEEETT----SEEEEEETTTT------EEEEEEECCSSCEEEEEECSSSSCEEE--EETTT-EEEEECCTTSCC
T ss_pred CCEEEEEeCC----CeEEEEECCCC------ceEEEEECCCCcEEEEEEcCCCCEEEE--EeCCC-eEEEEECCCCce
Confidence 5565656555 48999988641 233343322213455667777876666 43677 599999988764
No 188
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=57.49 E-value=83 Score=26.22 Aligned_cols=98 Identities=14% Similarity=0.109 Sum_probs=55.3
Q ss_pred cEEEEEEcCCceeeEecCCCCCCCCCCceEEEEE-CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCC-ce
Q 018497 209 WLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF-DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQ-RI 286 (355)
Q Consensus 209 ~~Il~fD~~~~~~~~i~lP~~~~~~~~~~~L~~~-~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~-~~ 286 (355)
..|..+|+.+.+.... ++ .... ....+.-. +|++.+....+ ..+.+|.+... .....+.... ..
T Consensus 129 ~~i~iwd~~~~~~~~~-~~-~~~~--~v~~~~~~~~~~~l~~~~~d----~~i~~wd~~~~------~~~~~~~~~~~~~ 194 (312)
T 4ery_A 129 ESVRIWDVKTGKCLKT-LP-AHSD--PVSAVHFNRDGSLIVSSSYD----GLCRIWDTASG------QCLKTLIDDDNPP 194 (312)
T ss_dssp SCEEEEETTTCCEEEE-EC-CCSS--CEEEEEECTTSSEEEEEETT----SCEEEEETTTC------CEEEEECCSSCCC
T ss_pred CcEEEEECCCCEEEEE-ec-CCCC--cEEEEEEcCCCCEEEEEeCC----CcEEEEECCCC------ceeeEEeccCCCc
Confidence 4788999987654322 22 1111 11222222 46766666655 48999988641 1222322111 12
Q ss_pred eEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEEE
Q 018497 287 WWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFKC 323 (355)
Q Consensus 287 ~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~~~~ 323 (355)
...+.+..+|..++. ...++ .+..||+++++...
T Consensus 195 ~~~~~~~~~~~~l~~--~~~d~-~i~iwd~~~~~~~~ 228 (312)
T 4ery_A 195 VSFVKFSPNGKYILA--ATLDN-TLKLWDYSKGKCLK 228 (312)
T ss_dssp EEEEEECTTSSEEEE--EETTT-EEEEEETTTTEEEE
T ss_pred eEEEEECCCCCEEEE--EcCCC-eEEEEECCCCcEEE
Confidence 444666777877776 43667 49999999887544
No 189
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=57.00 E-value=99 Score=26.93 Aligned_cols=98 Identities=10% Similarity=0.036 Sum_probs=55.5
Q ss_pred cEEEEEEcCCceeeE-ecCCCCCCCCC---CceEEEE-ECCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEec--
Q 018497 209 WLIVSFDFAKEIFQT-VMMPYDLSTDD---ADKYLNV-FDGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIE-- 281 (355)
Q Consensus 209 ~~Il~fD~~~~~~~~-i~lP~~~~~~~---~~~~L~~-~~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~-- 281 (355)
..|..+|+.+..-.. +... ...... ....++- .+|++.+++..+ ..+.||-+... .....+.
T Consensus 271 ~~i~lwd~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~s~~g~~l~~g~~d----g~i~vwd~~~~------~~~~~~~~~ 339 (380)
T 3iz6_a 271 GTCRLFDMRTGHQLQVYNRE-PDRNDNELPIVTSVAFSISGRLLFAGYSN----GDCYVWDTLLA------EMVLNLGTL 339 (380)
T ss_dssp SCEEEEETTTTEEEEEECCC-CSSSCCSSCSCSEEEECSSSSEEEEECTT----SCEEEEETTTC------CEEEEECCS
T ss_pred CeEEEEECCCCcEEEEeccc-ccccccccCceEEEEECCCCCEEEEEECC----CCEEEEECCCC------ceEEEEecc
Confidence 578999998776533 3322 111111 1122332 347777766655 48999987541 1222221
Q ss_pred -CCCc-eeEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCe
Q 018497 282 -KPQR-IWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDT 320 (355)
Q Consensus 282 -~~~~-~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~ 320 (355)
..+. ....+++..+|..++. ...++ .+.+||+.+++
T Consensus 340 ~~~h~~~v~~l~~s~dg~~l~s--gs~D~-~i~iW~~~~~~ 377 (380)
T 3iz6_a 340 QNSHEGRISCLGLSSDGSALCT--GSWDK-NLKIWAFSGHR 377 (380)
T ss_dssp CSSCCCCCCEEEECSSSSEEEE--ECTTS-CEEEEECCSSS
T ss_pred cCCCCCceEEEEECCCCCEEEE--eeCCC-CEEEEecCCCc
Confidence 1111 3455777788887777 53667 49999988653
No 190
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=56.80 E-value=96 Score=26.75 Aligned_cols=65 Identities=6% Similarity=0.073 Sum_probs=42.1
Q ss_pred CCeEEEEEecCCCCccE-EEEEEeccCCCCCCeEEEEEecC--CCceeEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCC
Q 018497 243 DGYLCVFATIPNNTFRS-YELWVMKEYGLTESWTKLYTIEK--PQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSD 319 (355)
Q Consensus 243 ~G~L~~v~~~~~~~~~~-l~iW~l~~~~~~~~W~~~~~i~~--~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~ 319 (355)
+|++.+.+..++ + +.||-++. ...+.++.. .......+++..+|..++. ...++ .+.+||++++
T Consensus 206 ~g~~l~s~s~d~----~~v~iwd~~~------~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s--~s~d~-~v~iw~~~~~ 272 (355)
T 3vu4_A 206 KSDMVATCSQDG----TIIRVFKTED------GVLVREFRRGLDRADVVDMKWSTDGSKLAV--VSDKW-TLHVFEIFND 272 (355)
T ss_dssp TSSEEEEEETTC----SEEEEEETTT------CCEEEEEECTTCCSCEEEEEECTTSCEEEE--EETTC-EEEEEESSCC
T ss_pred CCCEEEEEeCCC----CEEEEEECCC------CcEEEEEEcCCCCCcEEEEEECCCCCEEEE--EECCC-EEEEEEccCC
Confidence 467666666554 6 99998874 234455542 1113556777788877777 43566 5999999876
Q ss_pred e
Q 018497 320 T 320 (355)
Q Consensus 320 ~ 320 (355)
.
T Consensus 273 ~ 273 (355)
T 3vu4_A 273 Q 273 (355)
T ss_dssp S
T ss_pred C
Confidence 4
No 191
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=56.79 E-value=1e+02 Score=27.13 Aligned_cols=100 Identities=9% Similarity=0.026 Sum_probs=55.5
Q ss_pred cEEEEEEcCCcee-eEecCCCCCCCCCCceEEEEE-CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCc-
Q 018497 209 WLIVSFDFAKEIF-QTVMMPYDLSTDDADKYLNVF-DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQR- 285 (355)
Q Consensus 209 ~~Il~fD~~~~~~-~~i~lP~~~~~~~~~~~L~~~-~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~- 285 (355)
..|..+|+.+.+. ..+..| .... ....+.-. +|++.+++..++ .+.+|-++. ...+..+.....
T Consensus 192 ~~i~iwd~~~~~~~~~~~~~-~h~~--~v~~~~~s~~~~~l~s~~~dg----~i~iwd~~~------~~~~~~~~~~~~~ 258 (437)
T 3gre_A 192 SRVIIFDIRTLERLQIIENS-PRHG--AVSSICIDEECCVLILGTTRG----IIDIWDIRF------NVLIRSWSFGDHA 258 (437)
T ss_dssp SEEEEEETTTCCEEEEEECC-GGGC--CEEEEEECTTSCEEEEEETTS----CEEEEETTT------TEEEEEEBCTTCE
T ss_pred CeEEEEeCCCCeeeEEEccC-CCCC--ceEEEEECCCCCEEEEEcCCC----eEEEEEcCC------ccEEEEEecCCCC
Confidence 5899999987655 333433 2211 12223322 467666666654 899998874 233444432221
Q ss_pred eeEeEEEe----eCCcEEEEEEeeCCceEEEEEeCCCCeEEEE
Q 018497 286 IWWPLGFT----ERGKIFIRGECRHGGYGLLVYNPHSDTFKCI 324 (355)
Q Consensus 286 ~~~~~~~~----~~g~i~~~~~~~~~~~~l~~yd~~t~~~~~v 324 (355)
....+.+. .++.+++. ...++ .+.+||+++++....
T Consensus 259 ~v~~~~~~~~~s~~~~~l~s--~~~dg-~i~iwd~~~~~~~~~ 298 (437)
T 3gre_A 259 PITHVEVCQFYGKNSVIVVG--GSSKT-FLTIWNFVKGHCQYA 298 (437)
T ss_dssp EEEEEEECTTTCTTEEEEEE--ESTTE-EEEEEETTTTEEEEE
T ss_pred ceEEEEeccccCCCccEEEE--EcCCC-cEEEEEcCCCcEEEE
Confidence 12223222 34556666 42556 599999998886544
No 192
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=56.68 E-value=96 Score=26.70 Aligned_cols=99 Identities=10% Similarity=0.016 Sum_probs=51.5
Q ss_pred cEEEEEEcCCceeeE-ecCCCCCCCCCCceEEEEEC-Ce-EEEEEecCCCCccEEEEEEeccCCCCCCeEEEE-------
Q 018497 209 WLIVSFDFAKEIFQT-VMMPYDLSTDDADKYLNVFD-GY-LCVFATIPNNTFRSYELWVMKEYGLTESWTKLY------- 278 (355)
Q Consensus 209 ~~Il~fD~~~~~~~~-i~lP~~~~~~~~~~~L~~~~-G~-L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~------- 278 (355)
..|..+|+.+.+... +... .. ....+.-.. |. +.+++..+ ..+.+|.+..... ......
T Consensus 166 ~~v~~~d~~~~~~~~~~~~~---~~--~v~~~~~~~~~~~ll~~~~~d----g~i~i~d~~~~~~--~~~~~~~~~~~~~ 234 (408)
T 4a11_B 166 PKVQLCDLKSGSCSHILQGH---RQ--EILAVSWSPRYDYILATASAD----SRVKLWDVRRASG--CLITLDQHNGKKS 234 (408)
T ss_dssp SSEEEEESSSSCCCEEECCC---CS--CEEEEEECSSCTTEEEEEETT----SCEEEEETTCSSC--CSEECCTTTTCSC
T ss_pred CeEEEEeCCCcceeeeecCC---CC--cEEEEEECCCCCcEEEEEcCC----CcEEEEECCCCCc--ccccccccccccc
Confidence 478889988765432 2211 10 112233332 44 55555555 4899999865320 011000
Q ss_pred -Ee----cCCCceeEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeE
Q 018497 279 -TI----EKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTF 321 (355)
Q Consensus 279 -~i----~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~~ 321 (355)
.+ .........+.+..+|..++. ...++ .+.+||+++++.
T Consensus 235 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~--~~~dg-~i~vwd~~~~~~ 279 (408)
T 4a11_B 235 QAVESANTAHNGKVNGLCFTSDGLHLLT--VGTDN-RMRLWNSSNGEN 279 (408)
T ss_dssp CCTTTSSCSCSSCEEEEEECTTSSEEEE--EETTS-CEEEEETTTCCB
T ss_pred eeeccccccccCceeEEEEcCCCCEEEE--ecCCC-eEEEEECCCCcc
Confidence 00 000003445666677776666 43666 499999998764
No 193
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=56.61 E-value=1e+02 Score=26.85 Aligned_cols=106 Identities=6% Similarity=-0.047 Sum_probs=54.8
Q ss_pred EEEEEEcCCceeeEecCCCCCCCCCCceEEE-EECCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeE
Q 018497 210 LIVSFDFAKEIFQTVMMPYDLSTDDADKYLN-VFDGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWW 288 (355)
Q Consensus 210 ~Il~fD~~~~~~~~i~lP~~~~~~~~~~~L~-~~~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~ 288 (355)
.+..++..+......... ..-. .....+. .-+|+..+....++.....+.+|.+... ...-.+...+........
T Consensus 198 ~~~~~~~~~~~~~~~~~~-~~~~-~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~~~V~ 273 (365)
T 4h5i_A 198 SLEVISTVTGSCIARKTD-FDKN-WSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSG--NTSVLRSKQVTNRFKGIT 273 (365)
T ss_dssp CEEEEETTTCCEEEEECC-CCTT-EEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETT--EEEEEEEEEEESSCSCEE
T ss_pred eEEEEEeccCcceeeeec-CCCC-CCEEEEEEcCCCCEEEEEecCCcceeEEeecccccc--eecceeeeeecCCCCCeE
Confidence 577777776655433221 1111 0111222 3457766666555422235556665541 111112233332221355
Q ss_pred eEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEE
Q 018497 289 PLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFK 322 (355)
Q Consensus 289 ~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~~~ 322 (355)
.+++..+|+++.. ...++ .+.+||.++.+..
T Consensus 274 ~~~~Spdg~~las--gs~D~-~V~iwd~~~~~~~ 304 (365)
T 4h5i_A 274 SMDVDMKGELAVL--ASNDN-SIALVKLKDLSMS 304 (365)
T ss_dssp EEEECTTSCEEEE--EETTS-CEEEEETTTTEEE
T ss_pred eEEECCCCCceEE--EcCCC-EEEEEECCCCcEE
Confidence 6777888988777 43666 5999999998753
No 194
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=56.59 E-value=90 Score=26.36 Aligned_cols=101 Identities=16% Similarity=0.128 Sum_probs=51.5
Q ss_pred cEEEEEEcCCceeeE-ecCCCCCCCCCCceEEEEE-CCeEEEEEecC-CCCccEEEEEEeccCCCCCCeEEE-----EEe
Q 018497 209 WLIVSFDFAKEIFQT-VMMPYDLSTDDADKYLNVF-DGYLCVFATIP-NNTFRSYELWVMKEYGLTESWTKL-----YTI 280 (355)
Q Consensus 209 ~~Il~fD~~~~~~~~-i~lP~~~~~~~~~~~L~~~-~G~L~~v~~~~-~~~~~~l~iW~l~~~~~~~~W~~~-----~~i 280 (355)
..|..+|+.+.+... +..+ .. ...+.-. +|+..++...+ ......+.+|.++.......+... ..+
T Consensus 96 g~i~iwd~~~~~~~~~~~~~-~~-----v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~ 169 (369)
T 3zwl_B 96 YSIKLWDVSNGQCVATWKSP-VP-----VKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKI 169 (369)
T ss_dssp TEEEEEETTTCCEEEEEECS-SC-----EEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEE
T ss_pred CeEEEEECCCCcEEEEeecC-CC-----eEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeec
Confidence 468888887665433 2322 21 1122222 35555555543 011248999999864322222221 111
Q ss_pred cCCCc--eeEeEEEeeCCcEEEEEEeeCCceEEEEEeCCC
Q 018497 281 EKPQR--IWWPLGFTERGKIFIRGECRHGGYGLLVYNPHS 318 (355)
Q Consensus 281 ~~~~~--~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t 318 (355)
..... ....+.+..+|..++. ...++ .+..||+++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~l~~--~~~dg-~i~i~d~~~ 206 (369)
T 3zwl_B 170 ITHEGLDAATVAGWSTKGKYIIA--GHKDG-KISKYDVSN 206 (369)
T ss_dssp ECCTTCCCEEEEEECGGGCEEEE--EETTS-EEEEEETTT
T ss_pred cCCcCccceeEEEEcCCCCEEEE--EcCCC-EEEEEECCC
Confidence 11110 2444556667766666 43566 499999998
No 195
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=56.28 E-value=1.1e+02 Score=27.22 Aligned_cols=180 Identities=12% Similarity=0.077 Sum_probs=85.3
Q ss_pred ceEEEEcCCcccEEecCCCCCCCceeEEEEecCC-------CCCCcEEEE-EEcCCCceeEeccCCCceeeeccccccce
Q 018497 115 SLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVS-------GHLDDFKVV-YSLRSNSWKNIAYGFPRSIEINRSHINSS 186 (355)
Q Consensus 115 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~g~d~~~-------~~~~~ykvv-yss~t~~W~~~~~~~p~~~~~~~~~~~~~ 186 (355)
..+.++|..+++...|...... ...+.+.|.. ...+...|. ++.++++-+.+. ..+...... .
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~~~--v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~-~~~~~~~~~------~ 229 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSPQP--LMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVA-SFPRHNGAP------A 229 (415)
T ss_dssp EEEEEEETTSCSCEEEEEESSC--EEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEE-CCSSCEEEE------E
T ss_pred ceEEEEcCCCCCCEEEeCCCCc--ceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEee-cCCCcccCE------E
Confidence 6889999877665555432211 1222222220 001112332 787777666554 222111100 1
Q ss_pred eEeCce-EEEEEeeeccCCCCCCcEEEEEEcCCceeeEecCCCCCCCCCCceEEEEE-CCeEEEEEecCCCCccEEEEEE
Q 018497 187 VFLNGS-VHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF-DGYLCVFATIPNNTFRSYELWV 264 (355)
Q Consensus 187 v~~~G~-lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i~lP~~~~~~~~~~~L~~~-~G~L~~v~~~~~~~~~~l~iW~ 264 (355)
..-+|. |++..... ....|..+|+.+.+...+.-. .. ....+.-. +|+..++....+ ....||.
T Consensus 230 ~spdg~~la~~~~~~------g~~~i~~~d~~~~~~~~l~~~---~~--~~~~~~~spdg~~l~~~s~~~---g~~~i~~ 295 (415)
T 2hqs_A 230 FSPDGSKLAFALSKT------GSLNLYVMDLASGQIRQVTDG---RS--NNTEPTWFPDSQNLAFTSDQA---GRPQVYK 295 (415)
T ss_dssp ECTTSSEEEEEECTT------SSCEEEEEETTTCCEEECCCC---SS--CEEEEEECTTSSEEEEEECTT---SSCEEEE
T ss_pred EcCCCCEEEEEEecC------CCceEEEEECCCCCEEeCcCC---CC--cccceEECCCCCEEEEEECCC---CCcEEEE
Confidence 223665 44443321 235799999998876554211 11 11222222 466444444332 2455666
Q ss_pred eccCCCCCCeEEEEEecCCCceeEeEEEeeCCc-EEEEEEeeCCc-eEEEEEeCCCCeEEEE
Q 018497 265 MKEYGLTESWTKLYTIEKPQRIWWPLGFTERGK-IFIRGECRHGG-YGLLVYNPHSDTFKCI 324 (355)
Q Consensus 265 l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~-i~~~~~~~~~~-~~l~~yd~~t~~~~~v 324 (355)
++-... . ...+.........+.+..+|+ |++. ...++ ..++.+|+++++.+.+
T Consensus 296 ~d~~~~--~---~~~l~~~~~~~~~~~~spdG~~l~~~--~~~~g~~~i~~~d~~~~~~~~l 350 (415)
T 2hqs_A 296 VNINGG--A---PQRITWEGSQNQDADVSSDGKFMVMV--SSNGGQQHIAKQDLATGGVQVL 350 (415)
T ss_dssp EETTSS--C---CEECCCSSSEEEEEEECTTSSEEEEE--EECSSCEEEEEEETTTCCEEEC
T ss_pred EECCCC--C---EEEEecCCCcccCeEECCCCCEEEEE--ECcCCceEEEEEECCCCCEEEe
Confidence 654221 1 122222211233455667785 4444 31222 2699999999988655
No 196
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=56.08 E-value=90 Score=26.19 Aligned_cols=201 Identities=10% Similarity=0.026 Sum_probs=93.5
Q ss_pred CceEEEeecCCCCceEEEEcCCcccEEecCCCCCCCceeEEEEecCCCCCCcE-------EEE-EEcCCCceeEeccCCC
Q 018497 102 NGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDF-------KVV-YSLRSNSWKNIAYGFP 173 (355)
Q Consensus 102 ~GLl~l~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~g~d~~~~~~~~y-------kvv-yss~t~~W~~~~~~~p 173 (355)
++.|++.+. ...+++.++| +++...+..+... ..++.+|+. ++-| .|. |+.. ++.+.+. ...
T Consensus 56 g~~l~~~d~--~~~~i~~~~~-~g~~~~~~~~~~~--~~gl~~d~d---G~l~v~~~~~~~v~~~~~~-g~~~~~~-~~~ 125 (305)
T 3dr2_A 56 QRTLVWSDL--VGRRVLGWRE-DGTVDVLLDATAF--TNGNAVDAQ---QRLVHCEHGRRAITRSDAD-GQAHLLV-GRY 125 (305)
T ss_dssp GTEEEEEET--TTTEEEEEET-TSCEEEEEESCSC--EEEEEECTT---SCEEEEETTTTEEEEECTT-SCEEEEE-CEE
T ss_pred CCEEEEEEC--CCCEEEEEeC-CCCEEEEeCCCCc--cceeeECCC---CCEEEEECCCCEEEEECCC-CCEEEEE-ecc
Confidence 333444443 5678888898 6655544332211 246666664 3211 121 5543 5555443 111
Q ss_pred ceeeeccccccceeEeCceEEEEEeeecc---------CCCCCCcEEEEEEcCCceeeEecCCCCCCCCCCceEEEEE-C
Q 018497 174 RSIEINRSHINSSVFLNGSVHWCARFSCY---------HDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF-D 243 (355)
Q Consensus 174 ~~~~~~~~~~~~~v~~~G~lyw~~~~~~~---------~~~~~~~~Il~fD~~~~~~~~i~lP~~~~~~~~~~~L~~~-~ 243 (355)
......... .-.+--+|.+|+....... ........|..+|+.++++..+. . ... .-.++.. +
T Consensus 126 ~~~~~~~~~-~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~-~~~----p~gl~~spd 198 (305)
T 3dr2_A 126 AGKRLNSPN-DLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-D-LDH----PNGLAFSPD 198 (305)
T ss_dssp TTEECSCCC-CEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-E-ESS----EEEEEECTT
T ss_pred CCCccCCCC-CEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-c-CCC----CcceEEcCC
Confidence 111111111 0022337887774211000 00112357999999888776653 2 111 1123333 3
Q ss_pred Ce-EEEEEecCC-CCccEEEEEEeccCCCCCCeEEEEEe-cCCCceeEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCe
Q 018497 244 GY-LCVFATIPN-NTFRSYELWVMKEYGLTESWTKLYTI-EKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDT 320 (355)
Q Consensus 244 G~-L~~v~~~~~-~~~~~l~iW~l~~~~~~~~W~~~~~i-~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~ 320 (355)
|+ |+++..... .....+.+|.++. . . ......+ ........-+.+..+|.|++. . .. .|..||++.+.
T Consensus 199 g~~lyv~~~~~~~~~~~~i~~~~~~~--~-~-l~~~~~~~~~~~~~pdgi~~d~~G~lwv~--~--~~-gv~~~~~~g~~ 269 (305)
T 3dr2_A 199 EQTLYVSQTPEQGHGSVEITAFAWRD--G-A-LHDRRHFASVPDGLPDGFCVDRGGWLWSS--S--GT-GVCVFDSDGQL 269 (305)
T ss_dssp SSEEEEEECCC---CCCEEEEEEEET--T-E-EEEEEEEECCSSSCCCSEEECTTSCEEEC--C--SS-EEEEECTTSCE
T ss_pred CCEEEEEecCCcCCCCCEEEEEEecC--C-C-ccCCeEEEECCCCCCCeEEECCCCCEEEe--c--CC-cEEEECCCCCE
Confidence 54 666654320 0012454444443 1 1 2222222 111111223556677887776 4 33 39999999888
Q ss_pred EEEEEEec
Q 018497 321 FKCIGVHL 328 (355)
Q Consensus 321 ~~~v~~~~ 328 (355)
+..+....
T Consensus 270 ~~~~~~~~ 277 (305)
T 3dr2_A 270 LGHIPTPG 277 (305)
T ss_dssp EEEEECSS
T ss_pred EEEEECCC
Confidence 88876543
No 197
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=55.90 E-value=1.6e+02 Score=28.91 Aligned_cols=186 Identities=11% Similarity=0.128 Sum_probs=95.4
Q ss_pred CceEEEeecCCCCceEEEEcCCcccEEecCCCCC-------CCceeEEEEecCCCCCC-cE------EEE-EEcCCCcee
Q 018497 102 NGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSL-------NPRYLGFGVNSVSGHLD-DF------KVV-YSLRSNSWK 166 (355)
Q Consensus 102 ~GLl~l~~~~~~~~~~~V~NP~T~~~~~LP~~~~-------~~~~~~~g~d~~~~~~~-~y------kvv-yss~t~~W~ 166 (355)
+|-|-+.. ....+..+||.++++...+.... ......+..|+. .. =+ -+. |+.+++.++
T Consensus 367 ~g~lWiGt---~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~---g~~lWigt~~~Gl~~~d~~~~~~~ 440 (795)
T 4a2l_A 367 DKNLWIGT---NDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEK---KSLVYIGTHAGGLSILHRNSGQVE 440 (795)
T ss_dssp TSCEEEEE---SSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETT---TTEEEEEETTTEEEEEETTTCCEE
T ss_pred CCCEEEEE---CCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCC---CCEEEEEeCcCceeEEeCCCCcEE
Confidence 44444443 34568889999998887764321 111245555653 22 01 122 888888887
Q ss_pred EeccCCCceeeeccccccceeEe--CceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEecCCC--CCCCCCCceEEEE-
Q 018497 167 NIAYGFPRSIEINRSHINSSVFL--NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPY--DLSTDDADKYLNV- 241 (355)
Q Consensus 167 ~~~~~~p~~~~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i~lP~--~~~~~~~~~~L~~- 241 (355)
... ..........-. ++.. +|.+ |++... .|..||+.++++..+...- ..........+.+
T Consensus 441 ~~~-~~~~~l~~~~v~---~i~~d~~g~l-wigt~~---------Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d 506 (795)
T 4a2l_A 441 NFN-QRNSQLVNENVY---AILPDGEGNL-WLGTLS---------ALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRD 506 (795)
T ss_dssp EEC-TTTSCCSCSCEE---EEEECSSSCE-EEEESS---------CEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEEC
T ss_pred Eee-cCCCCcCCCeeE---EEEECCCCCE-EEEecC---------ceeEEeCCCCeEEEccccccccccCCceEEEEEEC
Confidence 665 211111000000 2333 4655 444333 6999999999998774220 1111112233443
Q ss_pred ECCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEe--cCCCc---eeEeEEEeeCCcEEEEEEeeCCceEEEEEeC
Q 018497 242 FDGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTI--EKPQR---IWWPLGFTERGKIFIRGECRHGGYGLLVYNP 316 (355)
Q Consensus 242 ~~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i--~~~~~---~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~ 316 (355)
.+|+|.+.+. . .+..+..+. ..+ . +.. ....+ ....+....+|.|.+. . ..+ ++.||+
T Consensus 507 ~~g~lWigt~-~-----Gl~~~~~~~----~~~-~-~~~~~~~~~l~~~~i~~i~~d~~g~lWig--T-~~G--l~~~d~ 569 (795)
T 4a2l_A 507 SHKRLWIGGE-E-----GLSVFKQEG----LDI-Q-KASILPVSNVTKLFTNCIYEASNGIIWVG--T-REG--FYCFNE 569 (795)
T ss_dssp TTCCEEEEES-S-----CEEEEEEET----TEE-E-ECCCSCSCGGGGSCEEEEEECTTSCEEEE--E-SSC--EEEEET
T ss_pred CCCCEEEEeC-C-----ceEEEeCCC----CeE-E-EecCCCCCCCCCCeeEEEEECCCCCEEEE--e-CCC--ceeECC
Confidence 3478877664 2 343343332 233 1 110 00011 2333444556788887 5 343 999999
Q ss_pred CCCeEEEE
Q 018497 317 HSDTFKCI 324 (355)
Q Consensus 317 ~t~~~~~v 324 (355)
++++++..
T Consensus 570 ~~~~~~~~ 577 (795)
T 4a2l_A 570 KDKQIKRY 577 (795)
T ss_dssp TTTEEEEE
T ss_pred CCCcEEEe
Confidence 99988765
No 198
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=55.65 E-value=97 Score=26.42 Aligned_cols=186 Identities=10% Similarity=0.048 Sum_probs=90.8
Q ss_pred eeeCceEEEeecCCCCceEEEEcCCc----cc-EEecCCCCCCCceeEEEEecCCCCCCcEEEE---------EEcCCCc
Q 018497 99 GSCNGVLCFCSNGSDRSLIYLWNPLI----KK-YMTLPRPSLNPRYLGFGVNSVSGHLDDFKVV---------YSLRSNS 164 (355)
Q Consensus 99 ~s~~GLl~l~~~~~~~~~~~V~NP~T----~~-~~~LP~~~~~~~~~~~g~d~~~~~~~~ykvv---------yss~t~~ 164 (355)
+..+|.|...+. ...+++..++.+ .. ...++... ....++.+|+. .+...+. ++.....
T Consensus 38 d~~~~~ly~~D~--~~~~I~~~~~~g~~~~~~~~~~~~~~~--~~p~glavd~~---~~~ly~~d~~~~~I~~~~~~g~~ 110 (316)
T 1ijq_A 38 EVASNRIYWSDL--SQRMICSTQLDRAHGVSSYDTVISRDI--QAPDGLAVDWI---HSNIYWTDSVLGTVSVADTKGVK 110 (316)
T ss_dssp ETTTTEEEEEET--TTTEEEEEEC--------CEEEECSSC--SCCCEEEEETT---TTEEEEEETTTTEEEEEETTSSS
T ss_pred EeCCCEEEEEEC--CCCcEEEEECCCCCCCcccEEEEeCCC--CCcCEEEEeec---CCeEEEEECCCCEEEEEeCCCCc
Confidence 345677877774 567888888876 22 22233211 11246777765 4333222 5554332
Q ss_pred eeEeccCCCceeeeccccccceeEe---CceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEe-cCCCCCCCCCCceEEE
Q 018497 165 WKNIAYGFPRSIEINRSHINSSVFL---NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTV-MMPYDLSTDDADKYLN 240 (355)
Q Consensus 165 W~~~~~~~p~~~~~~~~~~~~~v~~---~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i-~lP~~~~~~~~~~~L~ 240 (355)
=+.+. .... .... ++.+ +|.+||..... ...|..+|++...-..+ .-. .. ..-.|+
T Consensus 111 ~~~~~-~~~~----~~P~---~iavdp~~g~ly~~d~~~-------~~~I~~~~~dG~~~~~~~~~~---~~--~P~gla 170 (316)
T 1ijq_A 111 RKTLF-RENG----SKPR---AIVVDPVHGFMYWTDWGT-------PAKIKKGGLNGVDIYSLVTEN---IQ--WPNGIT 170 (316)
T ss_dssp EEEEE-ECTT----CCEE---EEEEETTTTEEEEEECSS-------SCEEEEEETTSCCEEEEECSS---CS--CEEEEE
T ss_pred eEEEE-ECCC----CCcc---eEEeCCCCCEEEEEccCC-------CCeEEEEcCCCCCeEEEEECC---CC--CceEEE
Confidence 22221 1000 0111 3333 78999986531 25899999976554443 211 10 222444
Q ss_pred EE--CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEeEEEe-eCCcEEEEEEeeCCceEEEEEeCC
Q 018497 241 VF--DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFT-ERGKIFIRGECRHGGYGLLVYNPH 317 (355)
Q Consensus 241 ~~--~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~-~~g~i~~~~~~~~~~~~l~~yd~~ 317 (355)
.. +|+||++..... .+ +..+-.+. .. ....... .. ...|.++. .++.+|+. ....+ .+..+|..
T Consensus 171 ~d~~~~~lY~~D~~~~----~I--~~~d~dg~-~~-~~~~~~~-~~-~~~P~giav~~~~ly~~--d~~~~-~V~~~~~~ 237 (316)
T 1ijq_A 171 LDLLSGRLYWVDSKLH----SI--SSIDVNGG-NR-KTILEDE-KR-LAHPFSLAVFEDKVFWT--DIINE-AIFSANRL 237 (316)
T ss_dssp EETTTTEEEEEETTTT----EE--EEEETTSC-SC-EEEEECT-TT-TSSEEEEEEETTEEEEE--ETTTT-EEEEEETT
T ss_pred EeccCCEEEEEECCCC----eE--EEEecCCC-ce-EEEeecC-Cc-cCCcEEEEEECCEEEEE--ECCCC-eEEEEeCC
Confidence 44 588988876432 44 44443221 11 1122211 11 12344433 34678887 52344 69999997
Q ss_pred CCeE-EEE
Q 018497 318 SDTF-KCI 324 (355)
Q Consensus 318 t~~~-~~v 324 (355)
+++. +.+
T Consensus 238 ~g~~~~~i 245 (316)
T 1ijq_A 238 TGSDVNLL 245 (316)
T ss_dssp TCCCCEEE
T ss_pred CCcceEEE
Confidence 6653 444
No 199
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=53.08 E-value=61 Score=31.02 Aligned_cols=29 Identities=7% Similarity=0.185 Sum_probs=22.5
Q ss_pred eeEeCceEEEEEe-eeccCCCCCCcEEEEEEc-CCc--eeeE
Q 018497 186 SVFLNGSVHWCAR-FSCYHDNSCPWLIVSFDF-AKE--IFQT 223 (355)
Q Consensus 186 ~v~~~G~lyw~~~-~~~~~~~~~~~~Il~fD~-~~~--~~~~ 223 (355)
+++.+|.+|.... .. .+.++|. .+. .|+.
T Consensus 58 P~v~~g~vyv~~~~~~---------~v~AlD~~~tG~~lW~~ 90 (599)
T 1w6s_A 58 PLVVDGKMYIHTSFPN---------NTFALGLDDPGTILWQD 90 (599)
T ss_dssp CEEETTEEEEECSTTT---------CEEEEETTCTTSEEEEE
T ss_pred cEEECCEEEEEeCCCC---------EEEEEeCCCCCcEEEEE
Confidence 7889999999876 43 7999998 544 5655
No 200
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=52.98 E-value=1.4e+02 Score=27.53 Aligned_cols=67 Identities=9% Similarity=0.045 Sum_probs=41.3
Q ss_pred Ce-EEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCc---eeEeEEEeeC-CcEEEEEEeeCCceEEEEEeCCC
Q 018497 244 GY-LCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQR---IWWPLGFTER-GKIFIRGECRHGGYGLLVYNPHS 318 (355)
Q Consensus 244 G~-L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~---~~~~~~~~~~-g~i~~~~~~~~~~~~l~~yd~~t 318 (355)
|. +.+....+ ..+.+|.++. ......+..... ....+.+..+ |..++. ...++ .+.+||+++
T Consensus 172 ~~~~l~~~~~d----~~v~vwd~~~------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~--~~~dg-~i~vwd~~~ 238 (615)
T 1pgu_A 172 RPMRSMTVGDD----GSVVFYQGPP------FKFSASDRTHHKQGSFVRDVEFSPDSGEFVIT--VGSDR-KISCFDGKS 238 (615)
T ss_dssp SSCEEEEEETT----TEEEEEETTT------BEEEEEECSSSCTTCCEEEEEECSTTCCEEEE--EETTC-CEEEEETTT
T ss_pred CCcEEEEEeCC----CcEEEEeCCC------cceeeeecccCCCCceEEEEEECCCCCCEEEE--EeCCC-eEEEEECCC
Confidence 44 55555544 4999998653 344555543322 2455667777 777766 43566 499999988
Q ss_pred CeEEE
Q 018497 319 DTFKC 323 (355)
Q Consensus 319 ~~~~~ 323 (355)
++...
T Consensus 239 ~~~~~ 243 (615)
T 1pgu_A 239 GEFLK 243 (615)
T ss_dssp CCEEE
T ss_pred CCEeE
Confidence 77543
No 201
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=52.36 E-value=1.1e+02 Score=26.07 Aligned_cols=91 Identities=12% Similarity=0.039 Sum_probs=50.4
Q ss_pred cEEEEEEcCCceeeE-ecCCCCCCCCCCceEEEEE-CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCce
Q 018497 209 WLIVSFDFAKEIFQT-VMMPYDLSTDDADKYLNVF-DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRI 286 (355)
Q Consensus 209 ~~Il~fD~~~~~~~~-i~lP~~~~~~~~~~~L~~~-~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~ 286 (355)
..|..+|+.+.+-.. +..+ .... ....+.-. +|++.+++..+ ..+.||.+.. ......+......
T Consensus 248 ~~v~iwd~~~~~~~~~~~~~-~~~~--~v~~~~~s~~g~~l~~g~~d----~~i~vwd~~~------~~~~~~~~~h~~~ 314 (340)
T 1got_B 248 ATCRLFDLRADQELMTYSHD-NIIC--GITSVSFSKSGRLLLAGYDD----FNCNVWDALK------ADRAGVLAGHDNR 314 (340)
T ss_dssp SCEEEEETTTTEEEEEECCT-TCCS--CEEEEEECTTSSEEEEEETT----SEEEEEETTT------CCEEEEEECCSSC
T ss_pred CcEEEEECCCCcEEEEEccC-Cccc--ceEEEEECCCCCEEEEECCC----CeEEEEEccc------CcEeeEeecCCCc
Confidence 578899998765432 2322 2111 11222222 47777777665 4999998764 2233344322223
Q ss_pred eEeEEEeeCCcEEEEEEeeCCceEEEEEe
Q 018497 287 WWPLGFTERGKIFIRGECRHGGYGLLVYN 315 (355)
Q Consensus 287 ~~~~~~~~~g~i~~~~~~~~~~~~l~~yd 315 (355)
...+++..+|..++. ...++ .+.+||
T Consensus 315 v~~~~~s~dg~~l~s--~s~D~-~i~iWd 340 (340)
T 1got_B 315 VSCLGVTDDGMAVAT--GSWDS-FLKIWN 340 (340)
T ss_dssp EEEEEECTTSSCEEE--EETTS-CEEEEC
T ss_pred EEEEEEcCCCCEEEE--EcCCc-cEEecC
Confidence 555677777876666 43566 377765
No 202
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=51.08 E-value=1.2e+02 Score=26.12 Aligned_cols=105 Identities=10% Similarity=0.097 Sum_probs=56.8
Q ss_pred cEEEEEEcCCceee-EecCCCCCCC-CCCceEEEEE-CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecC---
Q 018497 209 WLIVSFDFAKEIFQ-TVMMPYDLST-DDADKYLNVF-DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEK--- 282 (355)
Q Consensus 209 ~~Il~fD~~~~~~~-~i~lP~~~~~-~~~~~~L~~~-~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~--- 282 (355)
..|..||+.+.+.. .+........ ......+.-. +|++.++...++ ....+.+|.++.. ..+..+..
T Consensus 207 g~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~-~~g~i~i~d~~~~------~~~~~~~~~~~ 279 (397)
T 1sq9_A 207 GTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSN-SFGCITLYETEFG------ERIGSLSVPTH 279 (397)
T ss_dssp SEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEET-TEEEEEEEETTTC------CEEEEECBC--
T ss_pred CcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCC-CCceEEEEECCCC------cccceeccCcc
Confidence 58999999876543 2332000100 1111222222 466666665541 0138999988742 23333432
Q ss_pred ----------CCceeEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEEE
Q 018497 283 ----------PQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFKC 323 (355)
Q Consensus 283 ----------~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~~~~ 323 (355)
.......+.+..+|..++. ...++ .+.+||+++++...
T Consensus 280 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~--~~~dg-~i~iwd~~~~~~~~ 327 (397)
T 1sq9_A 280 SSQASLGEFAHSSWVMSLSFNDSGETLCS--AGWDG-KLRFWDVKTKERIT 327 (397)
T ss_dssp ------CCBSBSSCEEEEEECSSSSEEEE--EETTS-EEEEEETTTTEEEE
T ss_pred cccccccccccCCcEEEEEECCCCCEEEE--EeCCC-eEEEEEcCCCceeE
Confidence 1113445666677877776 43667 59999999887544
No 203
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=50.78 E-value=1.2e+02 Score=26.15 Aligned_cols=97 Identities=9% Similarity=0.090 Sum_probs=53.5
Q ss_pred cEEEEEEcCCceeeE-ecCCCCCCCCCCceEEEEE-CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCce
Q 018497 209 WLIVSFDFAKEIFQT-VMMPYDLSTDDADKYLNVF-DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRI 286 (355)
Q Consensus 209 ~~Il~fD~~~~~~~~-i~lP~~~~~~~~~~~L~~~-~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~ 286 (355)
..|..||+.+.+... +... .. ....+.-. +|++.++...+ ..+.+|.++... ....+......
T Consensus 227 g~i~~~d~~~~~~~~~~~~~-~~----~i~~~~~~~~~~~l~~~~~d----~~i~i~d~~~~~------~~~~~~~~~~~ 291 (425)
T 1r5m_A 227 GAIFVYQITEKTPTGKLIGH-HG----PISVLEFNDTNKLLLSASDD----GTLRIWHGGNGN------SQNCFYGHSQS 291 (425)
T ss_dssp GCEEEEETTCSSCSEEECCC-SS----CEEEEEEETTTTEEEEEETT----SCEEEECSSSBS------CSEEECCCSSC
T ss_pred CeEEEEEcCCCceeeeeccC-CC----ceEEEEECCCCCEEEEEcCC----CEEEEEECCCCc------cceEecCCCcc
Confidence 479999998765432 2211 11 12233333 46665555554 489999887521 11222211112
Q ss_pred eEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEEEE
Q 018497 287 WWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFKCI 324 (355)
Q Consensus 287 ~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~~~~v 324 (355)
...+.+..+| .++. ...++ .+.+||+++++....
T Consensus 292 i~~~~~~~~~-~l~~--~~~d~-~i~i~d~~~~~~~~~ 325 (425)
T 1r5m_A 292 IVSASWVGDD-KVIS--CSMDG-SVRLWSLKQNTLLAL 325 (425)
T ss_dssp EEEEEEETTT-EEEE--EETTS-EEEEEETTTTEEEEE
T ss_pred EEEEEECCCC-EEEE--EeCCC-cEEEEECCCCcEeEe
Confidence 4456666677 5554 32566 599999998875443
No 204
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=50.56 E-value=1e+02 Score=25.26 Aligned_cols=95 Identities=14% Similarity=0.208 Sum_probs=54.2
Q ss_pred cEEEEEEcCCceee-EecCCCCCCCCCCceEEEEE-CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCce
Q 018497 209 WLIVSFDFAKEIFQ-TVMMPYDLSTDDADKYLNVF-DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRI 286 (355)
Q Consensus 209 ~~Il~fD~~~~~~~-~i~lP~~~~~~~~~~~L~~~-~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~ 286 (355)
..|..+|+.+.+.. .+... .. ....+.-. +|+| ++...+ ..+.+|.++. . .....+......
T Consensus 205 g~i~i~d~~~~~~~~~~~~~-~~----~i~~~~~~~~~~l-~~~~~d----g~v~iwd~~~----~--~~~~~~~~~~~~ 268 (313)
T 3odt_A 205 GLIKLVDMHTGDVLRTYEGH-ES----FVYCIKLLPNGDI-VSCGED----RTVRIWSKEN----G--SLKQVITLPAIS 268 (313)
T ss_dssp SEEEEEETTTCCEEEEEECC-SS----CEEEEEECTTSCE-EEEETT----SEEEEECTTT----C--CEEEEEECSSSC
T ss_pred CeEEEEECCchhhhhhhhcC-Cc----eEEEEEEecCCCE-EEEecC----CEEEEEECCC----C--ceeEEEeccCce
Confidence 58999999866543 23322 11 12233333 3543 333333 5999998875 2 223333322222
Q ss_pred eEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEEE
Q 018497 287 WWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFKC 323 (355)
Q Consensus 287 ~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~~~~ 323 (355)
...+.+..+|.++.. . .++ .+.+||++++++..
T Consensus 269 i~~~~~~~~~~~~~~--~-~dg-~i~iw~~~~~~~~~ 301 (313)
T 3odt_A 269 IWSVDCMSNGDIIVG--S-SDN-LVRIFSQEKSRWAS 301 (313)
T ss_dssp EEEEEECTTSCEEEE--E-TTS-CEEEEESCGGGCCC
T ss_pred EEEEEEccCCCEEEE--e-CCC-cEEEEeCCCCceee
Confidence 455666778886655 5 677 49999999987643
No 205
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=50.36 E-value=1.8e+02 Score=27.89 Aligned_cols=171 Identities=9% Similarity=0.003 Sum_probs=86.4
Q ss_pred CceEEEEcCCcccEE-ecCCCCCCCceeEEEEecCCCCCCcEEEE---------EEcCCCceeEeccCCCceeeeccccc
Q 018497 114 RSLIYLWNPLIKKYM-TLPRPSLNPRYLGFGVNSVSGHLDDFKVV---------YSLRSNSWKNIAYGFPRSIEINRSHI 183 (355)
Q Consensus 114 ~~~~~V~NP~T~~~~-~LP~~~~~~~~~~~g~d~~~~~~~~ykvv---------yss~t~~W~~~~~~~p~~~~~~~~~~ 183 (355)
...+...+..+++.. .+|. .......++.||+. .+...+. ++..+...+.+- .... ....
T Consensus 14 ~~~I~~i~l~~~~~~~~~~~-~~~~~~~~l~~d~~---~~~lywtD~~~~~I~r~~~~g~~~~~v~-~~g~----~~P~- 83 (628)
T 4a0p_A 14 RADIRRISLETNNNNVAIPL-TGVKEASALDFDVT---DNRIYWTDISLKTISRAFMNGSALEHVV-EFGL----DYPE- 83 (628)
T ss_dssp TTEEEEEESSCTTCEEECCC-CSCSCEEEEEEETT---TTEEEEEETTTTEEEEEETTSCSCEEEE-CSSC----SCCC-
T ss_pred CCcEEEEECCCCCcceEEEc-CCCCceEEEEEECC---CCEEEEEECCCCeEEEEECCCCCcEEEE-eCCC----CCcc-
Confidence 345566666555433 3333 22223478888876 4433222 444444444332 1110 1111
Q ss_pred cceeEe---CceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEecCCCCCCCCCCceEEEEE--CCeEEEEEecCCCCcc
Q 018497 184 NSSVFL---NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF--DGYLCVFATIPNNTFR 258 (355)
Q Consensus 184 ~~~v~~---~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i~lP~~~~~~~~~~~L~~~--~G~L~~v~~~~~~~~~ 258 (355)
++.+ +|.|||..... ..|.++|++...-..+-- .... ....|+.. +|.||+.....
T Consensus 84 --GlAvD~~~~~LY~tD~~~--------~~I~v~~~dG~~~~~l~~--~~l~--~P~~iavdp~~G~lY~tD~g~----- 144 (628)
T 4a0p_A 84 --GMAVDWLGKNLYWADTGT--------NRIEVSKLDGQHRQVLVW--KDLD--SPRALALDPAEGFMYWTEWGG----- 144 (628)
T ss_dssp --EEEEETTTTEEEEEETTT--------TEEEEEETTSTTCEEEEC--SSCC--CEEEEEEETTTTEEEEEECSS-----
T ss_pred --eEEEEeCCCEEEEEECCC--------CEEEEEecCCCcEEEEEe--CCCC--CcccEEEccCCCeEEEeCCCC-----
Confidence 5544 68999987654 689999998665444311 1111 22344544 68888876532
Q ss_pred EEEEEEeccCCCCCCeEEEEEecCCCceeEeEEEe--e-CCcEEEEEEeeCCceEEEEEeCCCCeEEE
Q 018497 259 SYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFT--E-RGKIFIRGECRHGGYGLLVYNPHSDTFKC 323 (355)
Q Consensus 259 ~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~--~-~g~i~~~~~~~~~~~~l~~yd~~t~~~~~ 323 (355)
.-.|+...-.+.. -..+ +. . ...|.+++ . ++.||+. ..... .+..+|++++..+.
T Consensus 145 ~~~I~r~~~dG~~--~~~l--~~--~-~~~P~GlalD~~~~~LY~a--D~~~~-~I~~~d~dG~~~~v 202 (628)
T 4a0p_A 145 KPKIDRAAMDGSE--RTTL--VP--N-VGRANGLTIDYAKRRLYWT--DLDTN-LIESSNMLGLNREV 202 (628)
T ss_dssp SCEEEEEETTSCS--CEEE--EC--S-CSSEEEEEEETTTTEEEEE--ETTTT-EEEEEETTSCSCEE
T ss_pred CCEEEEEeCCCCc--eEEE--EC--C-CCCcceEEEccccCEEEEE--ECCCC-EEEEEcCCCCceEE
Confidence 2245555433321 1111 11 1 13454444 3 3477777 52334 58889988765543
No 206
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=50.34 E-value=1e+02 Score=25.15 Aligned_cols=112 Identities=9% Similarity=-0.089 Sum_probs=58.6
Q ss_pred CceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEecCCCCCCCCCCceEEEEE--CCeEEEEEecCCCCccEEEEEEecc
Q 018497 190 NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF--DGYLCVFATIPNNTFRSYELWVMKE 267 (355)
Q Consensus 190 ~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i~lP~~~~~~~~~~~L~~~--~G~L~~v~~~~~~~~~~l~iW~l~~ 267 (355)
+|.+||..... ..|..+|++......+ .+ .... ....++.. +|+|++...... ...+ +++.-
T Consensus 90 ~~~lyv~d~~~--------~~I~~~~~~g~~~~~~-~~-~~~~--~P~~i~vd~~~g~lyv~~~~~~--~~~I--~~~~~ 153 (267)
T 1npe_A 90 GRTIFWTDSQL--------DRIEVAKMDGTQRRVL-FD-TGLV--NPRGIVTDPVRGNLYWTDWNRD--NPKI--ETSHM 153 (267)
T ss_dssp TTEEEEEETTT--------TEEEEEETTSCSCEEE-EC-SSCS--SEEEEEEETTTTEEEEEECCSS--SCEE--EEEET
T ss_pred CCeEEEEECCC--------CEEEEEEcCCCCEEEE-EE-CCCC--CccEEEEeeCCCEEEEEECCCC--CcEE--EEEec
Confidence 58999987654 6899999976544433 12 1111 12334443 588888875421 1244 44432
Q ss_pred CCCCCCeEEEEEecCCCceeEeEEEeeC-CcEEEEEEeeCCceEEEEEeCCCCeEEEE
Q 018497 268 YGLTESWTKLYTIEKPQRIWWPLGFTER-GKIFIRGECRHGGYGLLVYNPHSDTFKCI 324 (355)
Q Consensus 268 ~~~~~~W~~~~~i~~~~~~~~~~~~~~~-g~i~~~~~~~~~~~~l~~yd~~t~~~~~v 324 (355)
.+... ......... ...-+++..+ +.+|+. ....+ .+..+|++++..+.+
T Consensus 154 dg~~~--~~~~~~~~~--~P~gia~d~~~~~lyv~--d~~~~-~I~~~~~~g~~~~~~ 204 (267)
T 1npe_A 154 DGTNR--RILAQDNLG--LPNGLTFDAFSSQLCWV--DAGTH-RAECLNPAQPGRRKV 204 (267)
T ss_dssp TSCCC--EEEECTTCS--CEEEEEEETTTTEEEEE--ETTTT-EEEEEETTEEEEEEE
T ss_pred CCCCc--EEEEECCCC--CCcEEEEcCCCCEEEEE--ECCCC-EEEEEecCCCceEEE
Confidence 22111 111111111 2333555554 467777 52334 599999987665444
No 207
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=50.18 E-value=1.5e+02 Score=28.92 Aligned_cols=56 Identities=20% Similarity=0.158 Sum_probs=34.6
Q ss_pred eeEe---CceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEe-cCCCCCCCCCCceEEEEECCeEEEEEec
Q 018497 186 SVFL---NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTV-MMPYDLSTDDADKYLNVFDGYLCVFATI 252 (355)
Q Consensus 186 ~v~~---~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i-~lP~~~~~~~~~~~L~~~~G~L~~v~~~ 252 (355)
++.+ +|.|||..... ..|.++|+.....+.+ ..+ .... ....|+..+++|+++...
T Consensus 544 Glavd~~~~~LY~aD~~~--------~~I~~~d~dG~~~~~~~~~~-~~~~--~P~glavd~~~lywtd~~ 603 (699)
T 1n7d_A 544 GITLDLLSGRLYWVDSKL--------HSISSIDVNGGNRKTILEDE-KRLA--HPFSLAVFEDKVFWTDII 603 (699)
T ss_dssp CEEECTTTCCEEEEETTT--------TEEEEECSSSSCCEEECCCS-SSCS--SCCCCEEETTEEEEECST
T ss_pred EEEEeccCCEEEEEecCC--------CeEEEEccCCCceEEEEecC-CcCC--CceEeEEECCEEEEEeCC
Confidence 5655 48999987654 6899999976554444 322 1111 223455567788887743
No 208
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=49.45 E-value=1.5e+02 Score=26.76 Aligned_cols=63 Identities=6% Similarity=-0.112 Sum_probs=36.7
Q ss_pred CceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEe-cCCCC-------------CCCCCCceEEEEE--CCeEEEEEecC
Q 018497 190 NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTV-MMPYD-------------LSTDDADKYLNVF--DGYLCVFATIP 253 (355)
Q Consensus 190 ~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i-~lP~~-------------~~~~~~~~~L~~~--~G~L~~v~~~~ 253 (355)
+|.||+..... +.|..||+.. ....+ -.+ . ...-.....|+.. +|.|+++....
T Consensus 354 ~g~lyvaD~~n--------~~I~~~~~~G-~v~t~~G~g-~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n 423 (433)
T 4hw6_A 354 EYDFYFCDRDS--------HTVRVLTPEG-RVTTYAGRG-NSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDN 423 (433)
T ss_dssp CEEEEEEETTT--------TEEEEECTTS-EEEEEECCC-TTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGG
T ss_pred CCcEEEEECCC--------CEEEEECCCC-CEEEEEeCC-CCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCC
Confidence 67899876654 6899999754 55444 222 1 0001123356666 68999887654
Q ss_pred CCCccEEEEEEec
Q 018497 254 NNTFRSYELWVMK 266 (355)
Q Consensus 254 ~~~~~~l~iW~l~ 266 (355)
.+++...++
T Consensus 424 ----~rIr~i~~e 432 (433)
T 4hw6_A 424 ----HRVRKIAPE 432 (433)
T ss_dssp ----TEEEEEEEC
T ss_pred ----CEEEEEecC
Confidence 355544443
No 209
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=49.13 E-value=1.8e+02 Score=27.72 Aligned_cols=91 Identities=11% Similarity=0.110 Sum_probs=47.3
Q ss_pred cEEEEEEcCCceeeEecCCCCCCCCCCceEEEEECCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCC----
Q 018497 209 WLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVFDGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQ---- 284 (355)
Q Consensus 209 ~~Il~fD~~~~~~~~i~lP~~~~~~~~~~~L~~~~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~---- 284 (355)
..|..+|+.+.+-.. .+. ... ....+.-..+...++...+ ..+.||.++.. ..+..+....
T Consensus 583 g~i~iwd~~~~~~~~-~~~-~~~---~v~~~~~sp~~~~l~~~~~----~~i~iwd~~~~------~~~~~~~~~~~~~~ 647 (694)
T 3dm0_A 583 GVVLLWDLAEGKKLY-SLE-ANS---VIHALCFSPNRYWLCAATE----HGIKIWDLESK------SIVEDLKVDLKAEA 647 (694)
T ss_dssp SBCEEEETTTTEEEE-CCB-CSS---CEEEEEECSSSSEEEEEET----TEEEEEETTTT------EEEEEECCCCC---
T ss_pred CeEEEEECCCCceEE-Eec-CCC---cEEEEEEcCCCcEEEEEcC----CCEEEEECCCC------CChhhhcccccccc
Confidence 578889998775422 222 111 1223333333334444444 37899987641 1112211100
Q ss_pred ---------------ceeEeEEEeeCCcEEEEEEeeCCceEEEEEeCC
Q 018497 285 ---------------RIWWPLGFTERGKIFIRGECRHGGYGLLVYNPH 317 (355)
Q Consensus 285 ---------------~~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~ 317 (355)
.....+.+..+|..++. ...++ .+.+||+.
T Consensus 648 ~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~s--gs~Dg-~i~iW~i~ 692 (694)
T 3dm0_A 648 EKADNSGPAATKRKVIYCTSLNWSADGSTLFS--GYTDG-VIRVWGIG 692 (694)
T ss_dssp -------------CCCCEEEEEECTTSSEEEE--EETTS-EEEEEEC-
T ss_pred ccccccccccCCceeEEeeeEEEcCCCCEEEE--EcCCC-eEEEEecc
Confidence 02334566778887777 43677 48889875
No 210
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=47.38 E-value=1.3e+02 Score=25.37 Aligned_cols=69 Identities=7% Similarity=0.050 Sum_probs=42.7
Q ss_pred CeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEEE
Q 018497 244 GYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFKC 323 (355)
Q Consensus 244 G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~~~~ 323 (355)
|++.++...+ ..+.+|.++.. ......+.........+.+..++..++. ...++ .+.+||+++.+...
T Consensus 187 ~~~l~~~~~d----g~i~i~d~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~~--~~~d~-~i~v~d~~~~~~~~ 254 (369)
T 3zwl_B 187 GKYIIAGHKD----GKISKYDVSNN-----YEYVDSIDLHEKSISDMQFSPDLTYFIT--SSRDT-NSFLVDVSTLQVLK 254 (369)
T ss_dssp GCEEEEEETT----SEEEEEETTTT-----TEEEEEEECCSSCEEEEEECTTSSEEEE--EETTS-EEEEEETTTCCEEE
T ss_pred CCEEEEEcCC----CEEEEEECCCC-----cEeEEEEecCCCceeEEEECCCCCEEEE--ecCCc-eEEEEECCCCceee
Confidence 5665655554 48999988741 2344444432223455666677876666 43566 49999999877644
Q ss_pred E
Q 018497 324 I 324 (355)
Q Consensus 324 v 324 (355)
.
T Consensus 255 ~ 255 (369)
T 3zwl_B 255 K 255 (369)
T ss_dssp E
T ss_pred e
Confidence 3
No 211
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=47.10 E-value=2e+02 Score=27.54 Aligned_cols=182 Identities=12% Similarity=0.014 Sum_probs=93.9
Q ss_pred eeeCceEEEeecCCCCceEEEEcCCcccEEecCCCCCCCceeEEEEecCCCCCCcEEEE---------EEcCCCceeEec
Q 018497 99 GSCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVV---------YSLRSNSWKNIA 169 (355)
Q Consensus 99 ~s~~GLl~l~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykvv---------yss~t~~W~~~~ 169 (355)
+..+|.|...+. ...++..+++.......+-.... ....++.+|.. ++...+. ++..+..=+.+.
T Consensus 45 d~~~~~lywtD~--~~~~I~r~~~~g~~~~~v~~~g~-~~P~GlAvD~~---~~~LY~tD~~~~~I~v~~~dG~~~~~l~ 118 (628)
T 4a0p_A 45 DVTDNRIYWTDI--SLKTISRAFMNGSALEHVVEFGL-DYPEGMAVDWL---GKNLYWADTGTNRIEVSKLDGQHRQVLV 118 (628)
T ss_dssp ETTTTEEEEEET--TTTEEEEEETTSCSCEEEECSSC-SCCCEEEEETT---TTEEEEEETTTTEEEEEETTSTTCEEEE
T ss_pred ECCCCEEEEEEC--CCCeEEEEECCCCCcEEEEeCCC-CCcceEEEEeC---CCEEEEEECCCCEEEEEecCCCcEEEEE
Confidence 445788888774 56788888887654433322211 11257778866 4443332 444322111111
Q ss_pred cCCCceeeeccccccceeEe---CceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEecCCCCCCCCCCceEEEEE--CC
Q 018497 170 YGFPRSIEINRSHINSSVFL---NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF--DG 244 (355)
Q Consensus 170 ~~~p~~~~~~~~~~~~~v~~---~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i~lP~~~~~~~~~~~L~~~--~G 244 (355)
... . .... ++.+ +|.|||..... ...|..+|++....+.+- . ... ....|+.. ++
T Consensus 119 -~~~--l--~~P~---~iavdp~~G~lY~tD~g~-------~~~I~r~~~dG~~~~~l~-~--~~~--~P~GlalD~~~~ 178 (628)
T 4a0p_A 119 -WKD--L--DSPR---ALALDPAEGFMYWTEWGG-------KPKIDRAAMDGSERTTLV-P--NVG--RANGLTIDYAKR 178 (628)
T ss_dssp -CSS--C--CCEE---EEEEETTTTEEEEEECSS-------SCEEEEEETTSCSCEEEE-C--SCS--SEEEEEEETTTT
T ss_pred -eCC--C--CCcc---cEEEccCCCeEEEeCCCC-------CCEEEEEeCCCCceEEEE-C--CCC--CcceEEEccccC
Confidence 000 0 1111 4443 69999987532 358999999876555441 1 110 12234433 58
Q ss_pred eEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEeEEEee-CCcEEEEEEeeCCceEEEEEeCCCCeEE
Q 018497 245 YLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTE-RGKIFIRGECRHGGYGLLVYNPHSDTFK 322 (355)
Q Consensus 245 ~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~-~g~i~~~~~~~~~~~~l~~yd~~t~~~~ 322 (355)
+||++..... . |+..+-.+. .. ..... .. ..|.++.- ++.||+. ....+ .+..+|..+++-.
T Consensus 179 ~LY~aD~~~~----~--I~~~d~dG~-~~-~v~~~-~l----~~P~glav~~~~ly~t--D~~~~-~I~~~dk~tg~~~ 241 (628)
T 4a0p_A 179 RLYWTDLDTN----L--IESSNMLGL-NR-EVIAD-DL----PHPFGLTQYQDYIYWT--DWSRR-SIERANKTSGQNR 241 (628)
T ss_dssp EEEEEETTTT----E--EEEEETTSC-SC-EEEEE-CC----SCEEEEEEETTEEEEE--ETTTT-EEEEEETTTCCSC
T ss_pred EEEEEECCCC----E--EEEEcCCCC-ce-EEeec-cC----CCceEEEEECCEEEEe--cCCCC-EEEEEECCCCCce
Confidence 9999886543 3 455554332 22 22111 11 23444442 3578877 52344 5999998776543
No 212
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=46.48 E-value=1.6e+02 Score=26.15 Aligned_cols=181 Identities=7% Similarity=-0.012 Sum_probs=88.2
Q ss_pred ceEEEEcCCcccEEecCCCCCCCceeEEEEecCC-------CCCCcEEEE-EEcCCCceeEeccCCCceeeeccccccce
Q 018497 115 SLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVS-------GHLDDFKVV-YSLRSNSWKNIAYGFPRSIEINRSHINSS 186 (355)
Q Consensus 115 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~g~d~~~-------~~~~~ykvv-yss~t~~W~~~~~~~p~~~~~~~~~~~~~ 186 (355)
..++++|..|++...+...... ...+.+.|.. ...+...|. ++.+++..+.+. ......... .
T Consensus 203 ~~i~~~d~~tg~~~~l~~~~~~--~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~-~~~~~~~~~------~ 273 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVASFPRH--NGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVT-DGRSNNTEP------T 273 (415)
T ss_dssp CEEEEEETTTCCEEEEECCSSC--EEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECC-CCSSCEEEE------E
T ss_pred cEEEEEECCCCcEEEeecCCCc--ccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCc-CCCCcccce------E
Confidence 5899999999988876544322 1233343320 001122232 677776655444 211111000 1
Q ss_pred eEeCce-EEEEEeeeccCCCCCCcEEEEEEcCCceeeEecCCCCCCCCCCceEEEE-ECCeEEEEEecCCCCccEEEEEE
Q 018497 187 VFLNGS-VHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNV-FDGYLCVFATIPNNTFRSYELWV 264 (355)
Q Consensus 187 v~~~G~-lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i~lP~~~~~~~~~~~L~~-~~G~L~~v~~~~~~~~~~l~iW~ 264 (355)
..-+|. +++..... ....|..+|+.+.+...+... .. ....+.- -+|+..++...+. ....+.+|.
T Consensus 274 ~spdg~~l~~~s~~~------g~~~i~~~d~~~~~~~~l~~~-~~----~~~~~~~spdG~~l~~~~~~~-g~~~i~~~d 341 (415)
T 2hqs_A 274 WFPDSQNLAFTSDQA------GRPQVYKVNINGGAPQRITWE-GS----QNQDADVSSDGKFMVMVSSNG-GQQHIAKQD 341 (415)
T ss_dssp ECTTSSEEEEEECTT------SSCEEEEEETTSSCCEECCCS-SS----EEEEEEECTTSSEEEEEEECS-SCEEEEEEE
T ss_pred ECCCCCEEEEEECCC------CCcEEEEEECCCCCEEEEecC-CC----cccCeEECCCCCEEEEEECcC-CceEEEEEE
Confidence 122565 44443221 234788899988775544222 11 1112222 2465444444332 114566666
Q ss_pred eccCCCCCCeEEEEEecCCCceeEeEEEeeCCcEEEEEEeeCCc-eEEEEEeCCCCeEEEEE
Q 018497 265 MKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGG-YGLLVYNPHSDTFKCIG 325 (355)
Q Consensus 265 l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~-~~l~~yd~~t~~~~~v~ 325 (355)
++. .... .+.... ....+.+..+|+.++.+ ...++ ..|+.+|++++..+.+.
T Consensus 342 ~~~----~~~~---~l~~~~-~~~~~~~spdg~~l~~~-s~~~~~~~l~~~d~~g~~~~~l~ 394 (415)
T 2hqs_A 342 LAT----GGVQ---VLSSTF-LDETPSLAPNGTMVIYS-SSQGMGSVLNLVSTDGRFKARLP 394 (415)
T ss_dssp TTT----CCEE---ECCCSS-SCEEEEECTTSSEEEEE-EEETTEEEEEEEETTSCCEEECC
T ss_pred CCC----CCEE---EecCCC-CcCCeEEcCCCCEEEEE-EcCCCccEEEEEECCCCcEEEee
Confidence 553 2222 222211 24445667788644441 21222 25999999998887763
No 213
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=46.27 E-value=2.1e+02 Score=27.48 Aligned_cols=122 Identities=11% Similarity=-0.035 Sum_probs=65.7
Q ss_pred eeEeCceEEEEEeeeccCCCCCCcEEEEEEcCCce---eeEecCCCCCCCCCCceEEEEECCeEEEEEecCCCCccEEEE
Q 018497 186 SVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEI---FQTVMMPYDLSTDDADKYLNVFDGYLCVFATIPNNTFRSYEL 262 (355)
Q Consensus 186 ~v~~~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~---~~~i~lP~~~~~~~~~~~L~~~~G~L~~v~~~~~~~~~~l~i 262 (355)
.+.-+|.+|+.... ......|..+|+.+.. |+.+--+ ... .....+...+|+|.+....+. ..+|
T Consensus 277 ~~~~~g~l~~~s~~-----~~~~~~l~~~d~~~~~~~~~~~l~~~-~~~--~~l~~~~~~~~~lv~~~~~dg----~~~l 344 (695)
T 2bkl_A 277 VHAWKDRFYVLTDE-----GAPRQRVFEVDPAKPARASWKEIVPE-DSS--ASLLSVSIVGGHLSLEYLKDA----TSEV 344 (695)
T ss_dssp EEEETTEEEEEECT-----TCTTCEEEEEBTTBCSGGGCEEEECC-CSS--CEEEEEEEETTEEEEEEEETT----EEEE
T ss_pred EEecCCcEEEEECC-----CCCCCEEEEEeCCCCCccCCeEEecC-CCC--CeEEEEEEECCEEEEEEEECC----EEEE
Confidence 44457775555432 2235689999997654 6665222 111 111223445888877776654 7888
Q ss_pred EEeccCCCCCCeEEEEEecCCCc-eeEeEEEeeCC-cEEEEEEeeCCc-eEEEEEeCCCCeEEEEE
Q 018497 263 WVMKEYGLTESWTKLYTIEKPQR-IWWPLGFTERG-KIFIRGECRHGG-YGLLVYNPHSDTFKCIG 325 (355)
Q Consensus 263 W~l~~~~~~~~W~~~~~i~~~~~-~~~~~~~~~~g-~i~~~~~~~~~~-~~l~~yd~~t~~~~~v~ 325 (355)
|.++-.+ . ....+..... ....+....++ .+++.... ... ..++.||+++++.+.+.
T Consensus 345 ~~~~~~g--~---~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss-~~~P~~v~~~d~~~g~~~~l~ 404 (695)
T 2bkl_A 345 RVATLKG--K---PVRTVQLPGVGAASNLMGLEDLDDAYYVFTS-FTTPRQIYKTSVSTGKSELWA 404 (695)
T ss_dssp EEEETTC--C---EEEECCCSSSSEECCCBSCTTCSEEEEEEEE-TTEEEEEEEEETTTCCEEEEE
T ss_pred EEEeCCC--C---eeEEecCCCCeEEEEeecCCCCCEEEEEEcC-CCCCCEEEEEECCCCcEEEEe
Confidence 8887422 1 3344543311 12222233455 45555111 111 26999999998876664
No 214
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=46.06 E-value=1.6e+02 Score=26.15 Aligned_cols=111 Identities=11% Similarity=0.124 Sum_probs=61.2
Q ss_pred eCceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEecCCCCCCCCCCceEEEE--ECCeEEEEEecCCCCccEEEEEEec
Q 018497 189 LNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNV--FDGYLCVFATIPNNTFRSYELWVMK 266 (355)
Q Consensus 189 ~~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i~lP~~~~~~~~~~~L~~--~~G~L~~v~~~~~~~~~~l~iW~l~ 266 (355)
.+|.|||..... ..|.++|++......+-- .... ....|+. .+|.|++...... . .|++.+
T Consensus 169 ~~~~lY~~d~~~--------~~I~~~~~~g~~~~~l~~--~~~~--~P~~iavdp~~g~ly~td~~~~---~--~I~~~~ 231 (400)
T 3p5b_L 169 IHSNIYWTDSVL--------GTVSVADTKGVKRKTLFR--ENGS--KPRAIVVDPVHGFMYWTDWGTP---A--KIKKGG 231 (400)
T ss_dssp TTTEEEEEETTT--------TEEEEECTTTCSEEEEEE--CSSC--CEEEEEEETTTTEEEEEECSSS---C--CEEEEE
T ss_pred cCCceEEEECCC--------CeEEEEeCCCCceEEEEe--CCCC--CcceEEEecccCeEEEEeCCCC---C--EEEEEe
Confidence 379999997654 689999998766544411 1111 1223444 3588888765332 2 355655
Q ss_pred cCCCCCCeEEEEEecCCCceeEe--EEEe-eCCcEEEEEEeeCCceEEEEEeCCCCeEEEEE
Q 018497 267 EYGLTESWTKLYTIEKPQRIWWP--LGFT-ERGKIFIRGECRHGGYGLLVYNPHSDTFKCIG 325 (355)
Q Consensus 267 ~~~~~~~W~~~~~i~~~~~~~~~--~~~~-~~g~i~~~~~~~~~~~~l~~yd~~t~~~~~v~ 325 (355)
-.+.. .+. .+. .. ...| +++. .++.||+. ..... .|..+|++....+.+-
T Consensus 232 ~dG~~---~~~-~~~-~~-l~~P~glavd~~~~~lY~a--D~~~~-~I~~~d~dG~~~~~~~ 284 (400)
T 3p5b_L 232 LNGVD---IYS-LVT-EN-IQWPNGITLDLLSGRLYWV--DSKLH-SISSIDVNGGNRKTIL 284 (400)
T ss_dssp TTSCS---CEE-EEC-SS-CSCEEEEEEETTTTEEEEE--ETTTT-EEEEEETTSCCCEEEE
T ss_pred CCCCc---cEE-EEE-CC-CCceEEEEEEeCCCEEEEE--ECCCC-EEEEEeCCCCccEEEE
Confidence 43321 111 111 11 1234 4444 34578887 52334 5999999887666653
No 215
>1evh_A WH1 domain, protein (MENA EVH1 domain); molecular recognition, actin dynamics, contractIle protein; 1.80A {Mus musculus} SCOP: b.55.1.4 PDB: 2xqn_M 2iyb_A
Probab=45.83 E-value=53 Score=23.61 Aligned_cols=45 Identities=13% Similarity=0.186 Sum_probs=31.6
Q ss_pred ceEEEEcCCcccEEecCCCCCCCceeEEEEecCCCCCCcEEEE-EEcCCC
Q 018497 115 SLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVV-YSLRSN 163 (355)
Q Consensus 115 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykvv-yss~t~ 163 (355)
..+++++|.|+.|...-. ......+.+..|.. .+.|+|+ ++.+++
T Consensus 11 A~V~~~d~~~~~W~p~~~-~~g~s~V~~~~d~~---~~~yrIv~~~l~~~ 56 (112)
T 1evh_A 11 AAVMVYDDANKKWVPAGG-STGFSRVHIYHHTG---NNTFRVVGRKIQDH 56 (112)
T ss_dssp EEEEEEETTTTEEEEGGG-CCSCEEEEEEEETT---TTEEEEEEEETTTC
T ss_pred EEEEEEcCCCCceEECCC-CCCceEEEEEEECC---CCEEEEEEEECCCC
Confidence 357889999998765432 11222377888987 8899999 776655
No 216
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=45.21 E-value=3.2 Score=37.05 Aligned_cols=29 Identities=0% Similarity=-0.159 Sum_probs=19.0
Q ss_pred eeEeCceEEEEEeeeccCCCCCCcEEEEEEcCCc--eeeE
Q 018497 186 SVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKE--IFQT 223 (355)
Q Consensus 186 ~v~~~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~--~~~~ 223 (355)
+++.+|.+|.-..++ .|.++|..++ .|+.
T Consensus 5 P~v~~~~v~~gs~dg---------~v~a~d~~tG~~~W~~ 35 (369)
T 2hz6_A 5 VTLPETLLFVSTLDG---------SLHAVSKRTGSIKWTL 35 (369)
T ss_dssp ---CTTEEEEEETTS---------EEEEEETTTCCEEEEE
T ss_pred CeeeCCEEEEEcCCC---------EEEEEECCCCCEEEEe
Confidence 667788888876654 8999998755 4543
No 217
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=45.17 E-value=1.3e+02 Score=24.70 Aligned_cols=109 Identities=12% Similarity=0.128 Sum_probs=56.8
Q ss_pred eeEeCceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEecCCCCCCCCCCceEEEEECCeEEEEEecCCCCccEEEEEEe
Q 018497 186 SVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVFDGYLCVFATIPNNTFRSYELWVM 265 (355)
Q Consensus 186 ~v~~~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i~lP~~~~~~~~~~~L~~~~G~L~~v~~~~~~~~~~l~iW~l 265 (355)
.+..+|.....+..+ ..|..+|. .+....+... ... .........++.+.++...++ .+.+|..
T Consensus 109 ~~~~~~~~l~~~~~d--------~~i~~~d~-~~~~~~~~~~-~~~--v~~~~~~~~~~~~l~~~~~d~----~i~i~d~ 172 (313)
T 3odt_A 109 SLSFQDGVVISGSWD--------KTAKVWKE-GSLVYNLQAH-NAS--VWDAKVVSFSENKFLTASADK----TIKLWQN 172 (313)
T ss_dssp EEEEETTEEEEEETT--------SEEEEEET-TEEEEEEECC-SSC--EEEEEEEETTTTEEEEEETTS----CEEEEET
T ss_pred EEEecCCEEEEEeCC--------CCEEEEcC-CcEEEecccC-CCc--eeEEEEccCCCCEEEEEECCC----CEEEEec
Confidence 344466555544433 57888992 2222223222 111 011222232576666666554 8999972
Q ss_pred ccCCCCCCeEEEEEecC-CCceeEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEE
Q 018497 266 KEYGLTESWTKLYTIEK-PQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFK 322 (355)
Q Consensus 266 ~~~~~~~~W~~~~~i~~-~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~~~ 322 (355)
. .....+.. .......+.+..++.++.. . .++ .+..||+++++..
T Consensus 173 ~--------~~~~~~~~~~~~~i~~~~~~~~~~~~~~--~-~dg-~i~i~d~~~~~~~ 218 (313)
T 3odt_A 173 D--------KVIKTFSGIHNDVVRHLAVVDDGHFISC--S-NDG-LIKLVDMHTGDVL 218 (313)
T ss_dssp T--------EEEEEECSSCSSCEEEEEEEETTEEEEE--E-TTS-EEEEEETTTCCEE
T ss_pred C--------ceEEEEeccCcccEEEEEEcCCCeEEEc--c-CCC-eEEEEECCchhhh
Confidence 2 22223332 1113555666777774444 4 666 4999999987653
No 218
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=45.08 E-value=1.4e+02 Score=25.02 Aligned_cols=72 Identities=11% Similarity=0.112 Sum_probs=43.3
Q ss_pred CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEeEEEeeCCc-EEEEEEeeCCceEEEEEeC-CCCe
Q 018497 243 DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGK-IFIRGECRHGGYGLLVYNP-HSDT 320 (355)
Q Consensus 243 ~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~-i~~~~~~~~~~~~l~~yd~-~t~~ 320 (355)
+|.+.++...+ ..+.||.++... ..-.......... ....+.+..+|. .++. ...++ .+..||+ ++++
T Consensus 22 ~~~~l~~~~~d----~~v~iw~~~~~~--~~~~~~~~~~~~~-~v~~~~~~~~~~~~l~~--~~~dg-~i~~wd~~~~~~ 91 (342)
T 1yfq_A 22 SKSLLLITSWD----GSLTVYKFDIQA--KNVDLLQSLRYKH-PLLCCNFIDNTDLQIYV--GTVQG-EILKVDLIGSPS 91 (342)
T ss_dssp GGTEEEEEETT----SEEEEEEEETTT--TEEEEEEEEECSS-CEEEEEEEESSSEEEEE--EETTS-CEEEECSSSSSS
T ss_pred CCCEEEEEcCC----CeEEEEEeCCCC--ccccceeeeecCC-ceEEEEECCCCCcEEEE--EcCCC-eEEEEEeccCCc
Confidence 46666666555 499999998632 1111122222222 345566777788 6666 43566 4999999 8887
Q ss_pred EEEE
Q 018497 321 FKCI 324 (355)
Q Consensus 321 ~~~v 324 (355)
...+
T Consensus 92 ~~~~ 95 (342)
T 1yfq_A 92 FQAL 95 (342)
T ss_dssp EEEC
T ss_pred eEec
Confidence 7554
No 219
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=44.91 E-value=1.3e+02 Score=25.21 Aligned_cols=15 Identities=0% Similarity=-0.219 Sum_probs=7.4
Q ss_pred EEEEEEcCCceeeEe
Q 018497 210 LIVSFDFAKEIFQTV 224 (355)
Q Consensus 210 ~Il~fD~~~~~~~~i 224 (355)
.|.+||...+....+
T Consensus 236 gl~~~~~~g~~~~~~ 250 (330)
T 3hxj_A 236 HLYAINPDGTEKWRF 250 (330)
T ss_dssp EEEEECTTSCEEEEE
T ss_pred eEEEECCCCCEeEEe
Confidence 566666544444333
No 220
>2kwv_A RAD30 homolog B, DNA polymerase IOTA; ubiquitin-binding motif, UBM, TL protein binding-signaling protein complex; HET: DNA; NMR {Mus musculus}
Probab=44.89 E-value=11 Score=22.28 Aligned_cols=17 Identities=24% Similarity=0.307 Sum_probs=12.6
Q ss_pred CCCCHHHHHHHHhcCCc
Q 018497 6 FRLPEDVMIDIFLRLEV 22 (355)
Q Consensus 6 ~~LP~dll~eIL~rLP~ 22 (355)
..||.|+.+|||+--..
T Consensus 22 ~~LP~dIQ~Ells~~~~ 38 (48)
T 2kwv_A 22 KQLPADIQEEILSGKSR 38 (48)
T ss_dssp TTSCHHHHHHHTTCCCS
T ss_pred HHCcHHHHHHHHhcchH
Confidence 47888888888876544
No 221
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=43.66 E-value=1.2e+02 Score=26.00 Aligned_cols=58 Identities=16% Similarity=0.143 Sum_probs=32.8
Q ss_pred CceEEEEEeeeccCCCCCCcEEEEEEcCCce-eeEecCCCCCCC--CCCceEEEEE--CCeEEEEEe
Q 018497 190 NGSVHWCARFSCYHDNSCPWLIVSFDFAKEI-FQTVMMPYDLST--DDADKYLNVF--DGYLCVFAT 251 (355)
Q Consensus 190 ~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~-~~~i~lP~~~~~--~~~~~~L~~~--~G~L~~v~~ 251 (355)
+|.||++.... .......|+.||+.+++ ...+.+| .... ....-.++.. +|.+++...
T Consensus 77 ~g~L~v~D~g~---~~~~~~~i~~~d~~tg~~~~~~~~~-~~~~~~~~~~~~v~vd~~~g~~yvtd~ 139 (343)
T 2qe8_A 77 NGIVWMLDNGN---QSKSVPKLVAWDTLNNQLSRVIYLP-PPITLSNSFVNDLAVDLIHNFVYISDP 139 (343)
T ss_dssp SSEEEEEECHH---HHTSCCEEEEEETTTTEEEEEEECC-TTTSCTTCCCCEEEEETTTTEEEEEEC
T ss_pred CCcEEEEcCCC---CcCCCCeEEEEECCCCeEEEEEECC-hhhcccccccceEEEecCCCEEEEEcC
Confidence 48899886430 00012479999999887 4666776 4321 1122334444 466766654
No 222
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=43.62 E-value=1.9e+02 Score=26.42 Aligned_cols=97 Identities=12% Similarity=0.166 Sum_probs=56.3
Q ss_pred cEEEEEEcCCceeeEecCCCCCCCCCCceEEEEE-CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCcee
Q 018497 209 WLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF-DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIW 287 (355)
Q Consensus 209 ~~Il~fD~~~~~~~~i~lP~~~~~~~~~~~L~~~-~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~ 287 (355)
..|..+|...+....+.-. .. ....+.-. +|++.+....+ ..+.||..+. ..+.++.......
T Consensus 448 ~~v~~w~~~~~~~~~~~~~-~~----~v~~~~~spd~~~las~~~d----~~i~iw~~~~-------~~~~~~~~h~~~v 511 (577)
T 2ymu_A 448 KTVKLWNRNGQLLQTLTGH-SS----SVRGVAFSPDGQTIASASDD----KTVKLWNRNG-------QLLQTLTGHSSSV 511 (577)
T ss_dssp SEEEEEETTSCEEEEEECC-SS----CEEEEEECTTSCEEEEEETT----SEEEEEETTS-------CEEEEEECCSSCE
T ss_pred CEEEEEECCCCEEEEEcCC-CC----CEEEEEEcCCCCEEEEEeCC----CEEEEEcCCC-------CEEEEEeCCCCCE
Confidence 5788899877665555322 11 11223333 47776666555 4899997431 2233333222235
Q ss_pred EeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEEEE
Q 018497 288 WPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFKCI 324 (355)
Q Consensus 288 ~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~~~~v 324 (355)
..+++..+|+.++. ...++ .+.+||...+.+..+
T Consensus 512 ~~l~~s~dg~~l~s--~~~dg-~v~lwd~~~~~~~~~ 545 (577)
T 2ymu_A 512 RGVAFSPDGQTIAS--ASDDK-TVKLWNRNGQLLQTL 545 (577)
T ss_dssp EEEEECTTSSCEEE--EETTS-EEEEECTTSCEEEEE
T ss_pred EEEEEcCCCCEEEE--EECcC-EEEEEeCCCCEEEEE
Confidence 55777788877776 43667 599999876665554
No 223
>1egx_A VAsp, vasodilator-stimulated phosphoprotein; EVH1, VAsp-ENA, poly-proline-binding domain, signaling protein; NMR {Homo sapiens} SCOP: b.55.1.4
Probab=43.49 E-value=41 Score=24.38 Aligned_cols=41 Identities=17% Similarity=0.276 Sum_probs=30.1
Q ss_pred eEEEEcCCcccEEecCCCCC--CCceeEEEEecCCCCCCcEEEE-EEcC
Q 018497 116 LIYLWNPLIKKYMTLPRPSL--NPRYLGFGVNSVSGHLDDFKVV-YSLR 161 (355)
Q Consensus 116 ~~~V~NP~T~~~~~LP~~~~--~~~~~~~g~d~~~~~~~~ykvv-yss~ 161 (355)
.+++++|.|+.|. |.... ....+.+..|.. .+.|+|+ ++..
T Consensus 12 ~V~~~d~~~~~W~--p~~~g~~gvs~V~~~~d~~---~~~yrI~~~~l~ 55 (115)
T 1egx_A 12 TVMLYDDGNKRWL--PAGTGPQAFSRVQIYHNPT---ANSFRVVGRKMQ 55 (115)
T ss_dssp ECBEECTTTSSCC--BSSCSCCCCEEEEEEEETT---TTEEEEEEEESS
T ss_pred EEEEEcCCCCcee--ECCCCCCCccEEEEEEeCC---CCEEEEEEEEcC
Confidence 5788899999975 44332 222377888988 8999998 8866
No 224
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=42.88 E-value=1.5e+02 Score=24.90 Aligned_cols=70 Identities=17% Similarity=0.198 Sum_probs=40.0
Q ss_pred CeEEEEEecCCCCccEEEEEEeccCCC--------CCCeEEEEEecCCCceeEeEEEeeC--CcEEEEEEeeCCceEEEE
Q 018497 244 GYLCVFATIPNNTFRSYELWVMKEYGL--------TESWTKLYTIEKPQRIWWPLGFTER--GKIFIRGECRHGGYGLLV 313 (355)
Q Consensus 244 G~L~~v~~~~~~~~~~l~iW~l~~~~~--------~~~W~~~~~i~~~~~~~~~~~~~~~--g~i~~~~~~~~~~~~l~~ 313 (355)
|.+.+....+ ..+.+|.+..... .........+.........+.+..+ |.+++. ...++ .+.+
T Consensus 241 ~~~l~~~~~d----~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~--~~~dg-~i~v 313 (366)
T 3k26_A 241 GDLILSKSCE----NAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLAL--GNQVG-KLYV 313 (366)
T ss_dssp TTEEEEECSS----SEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEE--ECTTS-CEEE
T ss_pred CCEEEEEecC----CEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEE--EecCC-cEEE
Confidence 6665555554 4999999875311 1122333444322212233445556 777777 43566 4999
Q ss_pred EeCCCCe
Q 018497 314 YNPHSDT 320 (355)
Q Consensus 314 yd~~t~~ 320 (355)
||+++++
T Consensus 314 wd~~~~~ 320 (366)
T 3k26_A 314 WDLEVED 320 (366)
T ss_dssp EECCSSS
T ss_pred EECCCCC
Confidence 9999874
No 225
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=41.43 E-value=3.1e+02 Score=28.21 Aligned_cols=98 Identities=12% Similarity=0.176 Sum_probs=53.5
Q ss_pred cEEEEEEcCCceeeEecCCCCCCCCCCceEEEEE-CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCc--
Q 018497 209 WLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF-DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQR-- 285 (355)
Q Consensus 209 ~~Il~fD~~~~~~~~i~lP~~~~~~~~~~~L~~~-~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~-- 285 (355)
..|..+|+.+.+.... +. .... ....+.-. +|++.+.+..+ ..+.+|.+.... ....+.....
T Consensus 723 ~~v~vwd~~~~~~~~~-~~-~h~~--~v~~~~~sp~~~~l~s~s~d----g~v~vwd~~~~~------~~~~~~~~~~~~ 788 (1249)
T 3sfz_A 723 FFLKLWDLNQKECRNT-MF-GHTN--SVNHCRFSPDDELLASCSAD----GTLRLWDVRSAN------ERKSINVKRFFL 788 (1249)
T ss_dssp SCEEEEETTSSSEEEE-EC-CCSS--CEEEEEECSSTTEEEEEESS----SEEEEEEGGGTE------EEEEEECCCCC-
T ss_pred CeEEEEECCCcchhhe-ec-CCCC--CEEEEEEecCCCEEEEEECC----CeEEEEeCCCCc------ccceeccccccc
Confidence 5788999987765332 11 1111 11222222 46666666555 489999987521 1122211110
Q ss_pred -----------eeEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEEEE
Q 018497 286 -----------IWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFKCI 324 (355)
Q Consensus 286 -----------~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~~~~v 324 (355)
....+.+..+|..++. . .++ .+..||..++.....
T Consensus 789 ~~~~~~~~~~~~v~~~~~s~dg~~l~~--~-~~~-~v~~~d~~~~~~~~~ 834 (1249)
T 3sfz_A 789 SSEDPPEDVEVIVKCCSWSADGDKIIV--A-AKN-KVLLFDIHTSGLLAE 834 (1249)
T ss_dssp -------CCCCCBCCCCBCTTSSEEEE--E-ETT-EEEEEETTTCCEEEE
T ss_pred ccCCccccccceEEEEEECCCCCEEEE--E-cCC-cEEEEEecCCCceeE
Confidence 1233455667777776 4 455 499999998876544
No 226
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=40.89 E-value=1.6e+02 Score=25.95 Aligned_cols=68 Identities=13% Similarity=0.104 Sum_probs=42.5
Q ss_pred CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCC--CceeEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCe
Q 018497 243 DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKP--QRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDT 320 (355)
Q Consensus 243 ~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~--~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~ 320 (355)
+|.+.++...+ ..+.+|-++.. ..+..+... ......+++..++..++. ...++ .+.+||+++++
T Consensus 181 ~~~~l~~~~~d----~~i~iwd~~~~------~~~~~~~~~~h~~~v~~~~~s~~~~~l~s--~~~dg-~i~iwd~~~~~ 247 (437)
T 3gre_A 181 EKSLLVALTNL----SRVIIFDIRTL------ERLQIIENSPRHGAVSSICIDEECCVLIL--GTTRG-IIDIWDIRFNV 247 (437)
T ss_dssp SCEEEEEEETT----SEEEEEETTTC------CEEEEEECCGGGCCEEEEEECTTSCEEEE--EETTS-CEEEEETTTTE
T ss_pred CCCEEEEEeCC----CeEEEEeCCCC------eeeEEEccCCCCCceEEEEECCCCCEEEE--EcCCC-eEEEEEcCCcc
Confidence 36666666655 49999988752 223333321 113555666777877776 43666 49999999877
Q ss_pred EEE
Q 018497 321 FKC 323 (355)
Q Consensus 321 ~~~ 323 (355)
...
T Consensus 248 ~~~ 250 (437)
T 3gre_A 248 LIR 250 (437)
T ss_dssp EEE
T ss_pred EEE
Confidence 643
No 227
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=40.86 E-value=2e+02 Score=25.81 Aligned_cols=47 Identities=13% Similarity=0.080 Sum_probs=27.4
Q ss_pred eeeCceEEEeecCCCCceEEEEcCCcccEEecCCCCCCCceeEEEEecC
Q 018497 99 GSCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSV 147 (355)
Q Consensus 99 ~s~~GLl~l~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~g~d~~ 147 (355)
+..+|.|.+.+. ...++++++|.+++...+..........++.+++.
T Consensus 234 dp~~g~lyv~d~--~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pd 280 (430)
T 3tc9_A 234 HPINGELYFNSW--NAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPS 280 (430)
T ss_dssp CTTTCCEEEEET--TTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTT
T ss_pred eCCCCEEEEEEC--CCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCC
Confidence 333787777764 56789999998876533322211111246777765
No 228
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=40.60 E-value=1.5e+02 Score=24.38 Aligned_cols=96 Identities=13% Similarity=0.051 Sum_probs=49.3
Q ss_pred cEEEEEEcC-CceeeE---e-cCCCCCCCCCCceEEEEE-CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecC
Q 018497 209 WLIVSFDFA-KEIFQT---V-MMPYDLSTDDADKYLNVF-DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEK 282 (355)
Q Consensus 209 ~~Il~fD~~-~~~~~~---i-~lP~~~~~~~~~~~L~~~-~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~ 282 (355)
..|..||+. ++++.. + .+| .... .....++.. +|.|++..... ..+.+|..+. ..-......+.
T Consensus 198 ~~i~~~~~~~~g~~~~~~~~~~~~-~~~~-~~p~~i~~d~~G~l~v~~~~~----~~i~~~d~~~----g~~~~~~~~~~ 267 (314)
T 1pjx_A 198 KKLWSYDIKGPAKIENKKVWGHIP-GTHE-GGADGMDFDEDNNLLVANWGS----SHIEVFGPDG----GQPKMRIRCPF 267 (314)
T ss_dssp TEEEEEEEEETTEEEEEEEEEECC-CCSS-CEEEEEEEBTTCCEEEEEETT----TEEEEECTTC----BSCSEEEECSS
T ss_pred CeEEEEECCCCCccccceEEEECC-CCCC-CCCCceEECCCCCEEEEEcCC----CEEEEEcCCC----CcEeEEEeCCC
Confidence 589999986 454422 1 333 2210 112234433 48888877654 3666665431 11222222222
Q ss_pred CCceeEeEEEeeCCc-EEEEEEeeCCceEEEEEeCCCC
Q 018497 283 PQRIWWPLGFTERGK-IFIRGECRHGGYGLLVYNPHSD 319 (355)
Q Consensus 283 ~~~~~~~~~~~~~g~-i~~~~~~~~~~~~l~~yd~~t~ 319 (355)
. ...-+++..+|. |++. ...++ .|..||+++.
T Consensus 268 ~--~~~~i~~~~dg~~l~v~--~~~~~-~l~~~~~~~~ 300 (314)
T 1pjx_A 268 E--KPSNLHFKPQTKTIFVT--EHENN-AVWKFEWQRN 300 (314)
T ss_dssp S--CEEEEEECTTSSEEEEE--ETTTT-EEEEEECSSC
T ss_pred C--CceeEEECCCCCEEEEE--eCCCC-eEEEEeCCCC
Confidence 1 233455566776 6666 42334 4999998764
No 229
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=39.21 E-value=1.8e+02 Score=24.66 Aligned_cols=196 Identities=10% Similarity=0.050 Sum_probs=90.2
Q ss_pred EEEeeeCceEEEeecCCCCceEEEEcCCcccEE-ecCCCCCCCceeEEEEec--CC------CCCCcEEEEEEcCCCcee
Q 018497 96 DVVGSCNGVLCFCSNGSDRSLIYLWNPLIKKYM-TLPRPSLNPRYLGFGVNS--VS------GHLDDFKVVYSLRSNSWK 166 (355)
Q Consensus 96 ~~~~s~~GLl~l~~~~~~~~~~~V~NP~T~~~~-~LP~~~~~~~~~~~g~d~--~~------~~~~~ykvvyss~t~~W~ 166 (355)
.+.++.+|.+.+-. ......++|..+++.. .+.... ......+.+.| .. +..+..++ |+.+++.-.
T Consensus 88 ~~s~s~D~~i~~w~---~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~l~s~s~dg~i~~-wd~~~~~~~ 162 (343)
T 3lrv_A 88 IISRGPCNRLLLLY---PGNQITILDSKTNKVLREIEVDS-ANEIIYMYGHNEVNTEYFIWADNRGTIGF-QSYEDDSQY 162 (343)
T ss_dssp EEEECSTTEEEEEE---TTTEEEEEETTTCCEEEEEECCC-SSCEEEEECCC---CCEEEEEETTCCEEE-EESSSSCEE
T ss_pred eEEecCCCeEEEEE---ccCceEEeecCCcceeEEeecCC-CCCEEEEEcCCCCCCCEEEEEeCCCcEEE-EECCCCcEE
Confidence 34566677776665 3567777888887733 222111 11124455555 20 00111221 777665442
Q ss_pred EeccCCCceeeeccccccceeEeCceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEecCCCC-CCCCCCceEEEEE-CC
Q 018497 167 NIAYGFPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYD-LSTDDADKYLNVF-DG 244 (355)
Q Consensus 167 ~~~~~~p~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i~lP~~-~~~~~~~~~L~~~-~G 244 (355)
... ........ ... ...-+|.+...+..+ ..|..+|+.+.+.....+. . .. .....+.-. +|
T Consensus 163 ~~~-~~~~~~~i-~~~---~~~pdg~~lasg~~d--------g~i~iwd~~~~~~~~~~~~-~~h~--~~v~~l~fs~~g 226 (343)
T 3lrv_A 163 IVH-SAKSDVEY-SSG---VLHKDSLLLALYSPD--------GILDVYNLSSPDQASSRFP-VDEE--AKIKEVKFADNG 226 (343)
T ss_dssp EEE-CCCSSCCC-CEE---EECTTSCEEEEECTT--------SCEEEEESSCTTSCCEECC-CCTT--SCEEEEEECTTS
T ss_pred EEE-ecCCCCce-EEE---EECCCCCEEEEEcCC--------CEEEEEECCCCCCCccEEe-ccCC--CCEEEEEEeCCC
Confidence 221 11111000 000 122356665554433 5899999988765412222 1 11 112233333 35
Q ss_pred eEEEEEecCCCCccEEEEEEeccCCCCCCeEEE--EEecCCCceeEeEEEeeCCcEEEEEEeeC-CceEEEEEeC--CCC
Q 018497 245 YLCVFATIPNNTFRSYELWVMKEYGLTESWTKL--YTIEKPQRIWWPLGFTERGKIFIRGECRH-GGYGLLVYNP--HSD 319 (355)
Q Consensus 245 ~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~--~~i~~~~~~~~~~~~~~~g~i~~~~~~~~-~~~~l~~yd~--~t~ 319 (355)
...+... + ..+.||-+............ +.+... ...+++..+|+.++. ... ++ .+.+||. .++
T Consensus 227 ~~l~s~~-~----~~v~iwd~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~~l~~--~s~~d~-~i~v~~~~~~~~ 295 (343)
T 3lrv_A 227 YWMVVEC-D----QTVVCFDLRKDVGTLAYPTYTIPEFKTG---TVTYDIDDSGKNMIA--YSNESN-SLTIYKFDKKTK 295 (343)
T ss_dssp SEEEEEE-S----SBEEEEETTSSTTCBSSCCCBC-----C---CEEEEECTTSSEEEE--EETTTT-EEEEEEECTTTC
T ss_pred CEEEEEe-C----CeEEEEEcCCCCcceeeccccccccccc---ceEEEECCCCCEEEE--ecCCCC-cEEEEEEccccc
Confidence 5555444 4 38999998763211111100 011111 123666777877666 423 55 4777766 555
Q ss_pred eEEE
Q 018497 320 TFKC 323 (355)
Q Consensus 320 ~~~~ 323 (355)
.|+.
T Consensus 296 ~~~~ 299 (343)
T 3lrv_A 296 NWTK 299 (343)
T ss_dssp SEEE
T ss_pred ceEe
Confidence 5665
No 230
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=38.99 E-value=2e+02 Score=25.34 Aligned_cols=66 Identities=9% Similarity=0.069 Sum_probs=39.0
Q ss_pred CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEeEEEeeCCc-EEEEEEeeCCceEEEEEeCCC
Q 018497 243 DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGK-IFIRGECRHGGYGLLVYNPHS 318 (355)
Q Consensus 243 ~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~-i~~~~~~~~~~~~l~~yd~~t 318 (355)
++.+++++..+ ..+.||-+.... .......+.........+.+..++. +++. ...++ .+.+||+++
T Consensus 243 ~~~~l~s~~~d----g~i~i~d~~~~~---~~~~~~~~~~~~~~v~~i~~~p~~~~~l~t--g~~dg-~v~vwd~~~ 309 (430)
T 2xyi_A 243 HESLFGSVADD----QKLMIWDTRNNN---TSKPSHTVDAHTAEVNCLSFNPYSEFILAT--GSADK-TVALWDLRN 309 (430)
T ss_dssp CTTEEEEEETT----SEEEEEETTCSC---SSSCSEEEECCSSCEEEEEECSSCTTEEEE--EETTS-EEEEEETTC
T ss_pred CCCEEEEEeCC----CeEEEEECCCCC---CCcceeEeecCCCCeEEEEeCCCCCCEEEE--EeCCC-eEEEEeCCC
Confidence 46676666655 499999998532 1122222222111345566666664 6666 43566 499999987
No 231
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=37.03 E-value=2.2e+02 Score=25.16 Aligned_cols=94 Identities=12% Similarity=0.147 Sum_probs=52.5
Q ss_pred cEEEEEEcCCceeeEe-cCCCCCCCCCCceEEEEE-CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCce
Q 018497 209 WLIVSFDFAKEIFQTV-MMPYDLSTDDADKYLNVF-DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRI 286 (355)
Q Consensus 209 ~~Il~fD~~~~~~~~i-~lP~~~~~~~~~~~L~~~-~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~ 286 (355)
..|..+|+.+.+.... ... .. ....+.-. +|...+++..+ ..+.+|.++. ...+.++......
T Consensus 290 ~~i~vwd~~~~~~~~~~~~~-~~----~v~~~~~~~~~~~l~sg~~d----g~i~vwd~~~------~~~~~~~~~h~~~ 354 (464)
T 3v7d_B 290 NTLIVWDVAQMKCLYILSGH-TD----RIYSTIYDHERKRCISASMD----TTIRIWDLEN------GELMYTLQGHTAL 354 (464)
T ss_dssp SCEEEEETTTTEEEEEECCC-SS----CEEEEEEETTTTEEEEEETT----SCEEEEETTT------TEEEEEECCCSSC
T ss_pred CeEEEEECCCCcEEEEecCC-CC----CEEEEEEcCCCCEEEEEeCC----CcEEEEECCC------CcEEEEEeCCCCc
Confidence 4799999987665332 211 11 12233333 46666666655 4899998864 1344444432212
Q ss_pred eEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEE
Q 018497 287 WWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFK 322 (355)
Q Consensus 287 ~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~~~ 322 (355)
...+.+ ++..++. ...++ .+.+||+++.+..
T Consensus 355 v~~~~~--~~~~l~s--~s~dg-~v~vwd~~~~~~~ 385 (464)
T 3v7d_B 355 VGLLRL--SDKFLVS--AAADG-SIRGWDANDYSRK 385 (464)
T ss_dssp EEEEEE--CSSEEEE--EETTS-EEEEEETTTCCEE
T ss_pred EEEEEE--cCCEEEE--EeCCC-cEEEEECCCCcee
Confidence 333333 3555555 32677 4999999987643
No 232
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=36.04 E-value=1.9e+02 Score=24.10 Aligned_cols=27 Identities=4% Similarity=-0.074 Sum_probs=18.8
Q ss_pred eeCceEEEeecCCCCceEEEEcCCcccEE
Q 018497 100 SCNGVLCFCSNGSDRSLIYLWNPLIKKYM 128 (355)
Q Consensus 100 s~~GLl~l~~~~~~~~~~~V~NP~T~~~~ 128 (355)
+.+|.+++... ....+.++|+.|++..
T Consensus 8 ~~~~~~~v~~~--~~~~v~~~d~~~~~~~ 34 (349)
T 1jmx_B 8 KAGHEYMIVTN--YPNNLHVVDVASDTVY 34 (349)
T ss_dssp CTTCEEEEEEE--TTTEEEEEETTTTEEE
T ss_pred cCCCEEEEEeC--CCCeEEEEECCCCcEE
Confidence 34555555543 5778999999998765
No 233
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=35.59 E-value=2.1e+02 Score=25.28 Aligned_cols=51 Identities=12% Similarity=-0.068 Sum_probs=31.6
Q ss_pred eEEEEEecCCCceeEeEEEeeCCc-EEEEEEee-CCceEEEEEeCCCCeEE-EEEEec
Q 018497 274 WTKLYTIEKPQRIWWPLGFTERGK-IFIRGECR-HGGYGLLVYNPHSDTFK-CIGVHL 328 (355)
Q Consensus 274 W~~~~~i~~~~~~~~~~~~~~~g~-i~~~~~~~-~~~~~l~~yd~~t~~~~-~v~~~~ 328 (355)
...+.+|+... ...-+.+..+|+ +|+. .. .++ .|-++|++|.+.. .|....
T Consensus 304 ~~vv~~i~vg~-~p~gi~~s~Dg~~l~va--~~~~~~-~VsVID~~t~kvv~~I~vg~ 357 (368)
T 1mda_H 304 GQTSGPISNGH-DSDAIIAAQDGASDNYA--NSAGTE-VLDIYDAASDQDQSSVELDK 357 (368)
T ss_dssp CCEEECCEEEE-EECEEEECCSSSCEEEE--EETTTT-EEEEEESSSCEEEEECCCCS
T ss_pred CeEEEEEECCC-CcceEEECCCCCEEEEE--ccCCCC-eEEEEECCCCcEEEEEECCC
Confidence 45566665442 122355677785 7777 63 245 5999999998864 344433
No 234
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=34.16 E-value=2.4e+02 Score=24.88 Aligned_cols=34 Identities=24% Similarity=0.503 Sum_probs=27.7
Q ss_pred CeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCC
Q 018497 244 GYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQ 284 (355)
Q Consensus 244 G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~ 284 (355)
.++|++...+. .+.+|...+ ...|+++|+.....
T Consensus 53 ~~~~~~~~~~~----~v~lw~~~~---~~~~~~~~~~~~~~ 86 (356)
T 2w18_A 53 KEPCIITACED----VVSLWKALD---AWQWEKLYTWHFAE 86 (356)
T ss_dssp CEEEEEEEESS----EEEEEEESS---SSBEEEEEEEECCS
T ss_pred CccEEEEeccc----eEEEcccCC---CccceeeEEEeccC
Confidence 47899998875 999999998 36799999886554
No 235
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=33.07 E-value=2.3e+02 Score=24.17 Aligned_cols=112 Identities=8% Similarity=-0.035 Sum_probs=59.5
Q ss_pred eCceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEecCCCCCCCCCCceEEEE--ECCeEEEEEecCCCCccEEEEEEec
Q 018497 189 LNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNV--FDGYLCVFATIPNNTFRSYELWVMK 266 (355)
Q Consensus 189 ~~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i~lP~~~~~~~~~~~L~~--~~G~L~~v~~~~~~~~~~l~iW~l~ 266 (355)
.+|.|||..... ..|..+|++...-..+. . .... ....++. .+|.|++..... .-.|++++
T Consensus 89 ~~g~ly~~d~~~--------~~I~~~~~dG~~~~~l~-~-~~~~--~P~giavdp~~g~ly~td~~~-----~~~I~r~~ 151 (318)
T 3sov_A 89 LGEKLYWTDSET--------NRIEVSNLDGSLRKVLF-W-QELD--QPRAIALDPSSGFMYWTDWGE-----VPKIERAG 151 (318)
T ss_dssp TTTEEEEEETTT--------TEEEEEETTSCSCEEEE-C-SSCS--SEEEEEEEGGGTEEEEEECSS-----SCEEEEEE
T ss_pred CCCeEEEEECCC--------CEEEEEECCCCcEEEEE-e-CCCC--CccEEEEeCCCCEEEEEecCC-----CCEEEEEE
Confidence 478999987654 68999999865444431 1 1111 1223444 358888876432 22456665
Q ss_pred cCCCCCCeEEEEEecCCCceeEeEEEee-CCcEEEEEEeeCCceEEEEEeCCCCeEEEE
Q 018497 267 EYGLTESWTKLYTIEKPQRIWWPLGFTE-RGKIFIRGECRHGGYGLLVYNPHSDTFKCI 324 (355)
Q Consensus 267 ~~~~~~~W~~~~~i~~~~~~~~~~~~~~-~g~i~~~~~~~~~~~~l~~yd~~t~~~~~v 324 (355)
-.+.. .+.. +...-....-+++.. ++.||+. ..... .+..+|++.+..+.+
T Consensus 152 ~dG~~---~~~~-~~~~l~~Pnglavd~~~~~lY~a--D~~~~-~I~~~d~dG~~~~~~ 203 (318)
T 3sov_A 152 MDGSS---RFII-INSEIYWPNGLTLDYEEQKLYWA--DAKLN-FIHKSNLDGTNRQAV 203 (318)
T ss_dssp TTSCS---CEEE-ECSSCSCEEEEEEETTTTEEEEE--ETTTT-EEEEEETTSCSCEEE
T ss_pred cCCCC---eEEE-EECCCCCccEEEEeccCCEEEEE--ECCCC-EEEEEcCCCCceEEE
Confidence 43321 1111 111110122344553 4578887 52334 599999887655554
No 236
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=32.63 E-value=3.4e+02 Score=26.00 Aligned_cols=114 Identities=10% Similarity=0.097 Sum_probs=59.8
Q ss_pred CceEEEEEeeeccCCCCCCcEEEEEEcCCc---eeeEecCCCCCCCCCCceEEEEECCeEEEEEecCCCCccEEEEEEec
Q 018497 190 NGSVHWCARFSCYHDNSCPWLIVSFDFAKE---IFQTVMMPYDLSTDDADKYLNVFDGYLCVFATIPNNTFRSYELWVMK 266 (355)
Q Consensus 190 ~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~---~~~~i~lP~~~~~~~~~~~L~~~~G~L~~v~~~~~~~~~~l~iW~l~ 266 (355)
++.+|+..... .....|+.+|+.+. .|+.+ .| ... . .. .....++.|.+....+. .-.|+.++
T Consensus 291 g~~l~~~t~~~-----~~~~~l~~~d~~~~~~~~~~~l-~~-~~~-~-~~-~~s~~g~~lv~~~~~~g----~~~l~~~d 356 (693)
T 3iuj_A 291 GSTLYLLTNRD-----APNRRLVTVDAANPGPAHWRDL-IP-ERQ-Q-VL-TVHSGSGYLFAEYMVDA----TARVEQFD 356 (693)
T ss_dssp TTEEEEEECTT-----CTTCEEEEEETTSCCGGGCEEE-EC-CCS-S-CE-EEEEETTEEEEEEEETT----EEEEEEEC
T ss_pred CCEEEEEECCC-----CCCCEEEEEeCCCCCccccEEE-ec-CCC-C-EE-EEEEECCEEEEEEEECC----eeEEEEEE
Confidence 56777766532 23468999999864 36654 22 221 1 12 44455567766666543 44455554
Q ss_pred cCCCCCCeEEEEEecCCCc-eeEeEEEeeCC-cEEEEEEeeC---CceEEEEEeCCCCeEEEEE
Q 018497 267 EYGLTESWTKLYTIEKPQR-IWWPLGFTERG-KIFIRGECRH---GGYGLLVYNPHSDTFKCIG 325 (355)
Q Consensus 267 ~~~~~~~W~~~~~i~~~~~-~~~~~~~~~~g-~i~~~~~~~~---~~~~l~~yd~~t~~~~~v~ 325 (355)
-. ..+.+ .+..... ....+....++ .+++. ... .. .++.||+++++.+.+.
T Consensus 357 ~~---g~~~~--~l~~p~~~~~~~~~~~~d~~~l~~~--~ss~~tP~-~l~~~d~~~g~~~~l~ 412 (693)
T 3iuj_A 357 YE---GKRVR--EVALPGLGSVSGFNGKHDDPALYFG--FENYAQPP-TLYRFEPKSGAISLYR 412 (693)
T ss_dssp TT---SCEEE--EECCSSSSEEEECCCCTTCSCEEEE--EECSSSCC-EEEEECTTTCCEEEEE
T ss_pred CC---CCeeE--EeecCCCceEEeeecCCCCCEEEEE--ecCCCCCC-EEEEEECCCCeEEEEE
Confidence 32 22333 3433321 12222222244 56666 311 23 6999999998877664
No 237
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=31.76 E-value=2.7e+02 Score=24.62 Aligned_cols=72 Identities=13% Similarity=0.083 Sum_probs=42.6
Q ss_pred CeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEeEEEeeCCcEEEEEEeeCC------ce--EEEEEe
Q 018497 244 GYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHG------GY--GLLVYN 315 (355)
Q Consensus 244 G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~------~~--~l~~yd 315 (355)
|+..++..... ..+.||.+.+.. +..+..+..+.... ....+++.. +.+++. .... .+ .++.++
T Consensus 319 ~~~l~~~~~~d---~~i~iw~~~~~~-~~~l~~~~~~~~~~-~v~~~~~~~-~~~~v~--~~~~~~~~~~~~~i~v~~~~ 390 (450)
T 2vdu_B 319 LPFVAFFVEAT---KCIIILEMSEKQ-KGDLALKQIITFPY-NVISLSAHN-DEFQVT--LDNKESSGVQKNFAKFIEYN 390 (450)
T ss_dssp SSEEEEEETTC---SEEEEEEECSSS-TTCEEEEEEEECSS-CEEEEEEET-TEEEEE--ECCTTCCSSCCCSEEEEEEE
T ss_pred CCEEEEEECCC---CeEEEEEeccCC-CCceeeccEeccCC-ceEEEEecC-CcEEEE--EecccCCCCCCcceEEEEEE
Confidence 66666666333 599999993211 24567777776543 244455555 445555 3111 11 588889
Q ss_pred CCCCeEEE
Q 018497 316 PHSDTFKC 323 (355)
Q Consensus 316 ~~t~~~~~ 323 (355)
.++++++.
T Consensus 391 ~~~~~~~~ 398 (450)
T 2vdu_B 391 LNENSFVV 398 (450)
T ss_dssp TTTTEEEE
T ss_pred cCCCeEEE
Confidence 99998863
No 238
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=31.05 E-value=2.2e+02 Score=23.41 Aligned_cols=97 Identities=14% Similarity=0.126 Sum_probs=50.9
Q ss_pred cEEEEEEcCCceeeE-ecCCCCCCCCCCceE-EEEE-CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCc
Q 018497 209 WLIVSFDFAKEIFQT-VMMPYDLSTDDADKY-LNVF-DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQR 285 (355)
Q Consensus 209 ~~Il~fD~~~~~~~~-i~lP~~~~~~~~~~~-L~~~-~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~ 285 (355)
..|..+|+.+.+... +... .. .... +.-. +|+..++...+ ..+.+|.+... .....+.....
T Consensus 171 ~~i~~wd~~~~~~~~~~~~~--~~---~~~~~~~~~~~~~~l~~~~~d----~~i~iwd~~~~------~~~~~~~~~~~ 235 (312)
T 4ery_A 171 GLCRIWDTASGQCLKTLIDD--DN---PPVSFVKFSPNGKYILAATLD----NTLKLWDYSKG------KCLKTYTGHKN 235 (312)
T ss_dssp SCEEEEETTTCCEEEEECCS--SC---CCEEEEEECTTSSEEEEEETT----TEEEEEETTTT------EEEEEECSSCC
T ss_pred CcEEEEECCCCceeeEEecc--CC---CceEEEEECCCCCEEEEEcCC----CeEEEEECCCC------cEEEEEEecCC
Confidence 478899998765432 2211 11 1122 2222 36666665555 48999988641 22223321111
Q ss_pred --eeEeEEEe-eCCcEEEEEEeeCCceEEEEEeCCCCeEEE
Q 018497 286 --IWWPLGFT-ERGKIFIRGECRHGGYGLLVYNPHSDTFKC 323 (355)
Q Consensus 286 --~~~~~~~~-~~g~i~~~~~~~~~~~~l~~yd~~t~~~~~ 323 (355)
......+. .++..++. ...++ .+.+||+++++...
T Consensus 236 ~~~~~~~~~~~~~~~~l~s--g~~dg-~i~vwd~~~~~~~~ 273 (312)
T 4ery_A 236 EKYCIFANFSVTGGKWIVS--GSEDN-LVYIWNLQTKEIVQ 273 (312)
T ss_dssp SSSCCCEEEECSSSCEEEE--CCTTS-CEEEEETTTCCEEE
T ss_pred ceEEEEEEEEeCCCcEEEE--ECCCC-EEEEEECCCchhhh
Confidence 11111222 35566666 43566 49999999987643
No 239
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=31.01 E-value=2e+02 Score=25.13 Aligned_cols=73 Identities=5% Similarity=0.053 Sum_probs=0.0
Q ss_pred CCeEEEEEecCCCCccEEEEEEeccCC-----CCCCeEEEEEecCCC------------ceeEeEEEeeCC--cEEEEEE
Q 018497 243 DGYLCVFATIPNNTFRSYELWVMKEYG-----LTESWTKLYTIEKPQ------------RIWWPLGFTERG--KIFIRGE 303 (355)
Q Consensus 243 ~G~L~~v~~~~~~~~~~l~iW~l~~~~-----~~~~W~~~~~i~~~~------------~~~~~~~~~~~g--~i~~~~~ 303 (355)
+|.+.+++..++ .+.||.++... ...++.....+.... .....+.+..++ ..++.
T Consensus 39 ~g~~la~g~~dg----~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s-- 112 (447)
T 3dw8_B 39 SGELLATGDKGG----RVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLL-- 112 (447)
T ss_dssp SSSEEEEEETTS----EEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEE--
T ss_pred CCCEEEEEcCCC----eEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcceEEE--
Q ss_pred eeCCceEEEEEeCCCCeEE
Q 018497 304 CRHGGYGLLVYNPHSDTFK 322 (355)
Q Consensus 304 ~~~~~~~l~~yd~~t~~~~ 322 (355)
...++. +.+||+.++...
T Consensus 113 ~s~d~~-i~iw~~~~~~~~ 130 (447)
T 3dw8_B 113 STNDKT-IKLWKISERDKR 130 (447)
T ss_dssp EECSSC-EEEEEEEEEEEE
T ss_pred eCCCCe-EEEEecccccCC
No 240
>1ddw_A GLGF-domain protein homer; pleckstrin homology domain fold, signaling protein; 1.70A {Rattus norvegicus} SCOP: b.55.1.4 PDB: 1ddv_A 2p8v_A 1i7a_A*
Probab=30.88 E-value=1e+02 Score=22.43 Aligned_cols=37 Identities=8% Similarity=0.311 Sum_probs=26.7
Q ss_pred ceEEEEcCCcc-cEEecCCCCCCCceeEEEEecCCCCCCcEEEE
Q 018497 115 SLIYLWNPLIK-KYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVV 157 (355)
Q Consensus 115 ~~~~V~NP~T~-~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykvv 157 (355)
-.+++.||.|+ .|+..-... ..+.+.+|+. .+.|+|+
T Consensus 11 A~V~~~D~~tk~~W~p~g~~~---~~V~~~~d~~---~~~yRIv 48 (120)
T 1ddw_A 11 AHVFQIDPNTKKNWVPTSKHA---VTVSYFYDST---RNVYRII 48 (120)
T ss_dssp EEEEEECTTTSCSEEESCSSC---EEEEEEEETT---TTEEEEE
T ss_pred EEEEEEcCCCCCceEeCCCCc---eEEEEEEcCC---CCEEEEE
Confidence 35889999996 997544322 2366778887 8889986
No 241
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=30.60 E-value=3.6e+02 Score=25.65 Aligned_cols=110 Identities=12% Similarity=0.108 Sum_probs=58.1
Q ss_pred eCceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEecCCCCCCCCCCceEEEEE--CCeEEEEEecCCCCccEEEEEEec
Q 018497 189 LNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF--DGYLCVFATIPNNTFRSYELWVMK 266 (355)
Q Consensus 189 ~~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i~lP~~~~~~~~~~~L~~~--~G~L~~v~~~~~~~~~~l~iW~l~ 266 (355)
.+|.|||..... ..|.++++....-+.+-- .... ....|+.. +|.||+...... .. |+...
T Consensus 402 ~~~~lY~tD~~~--------~~I~v~~~~G~~~~~l~~--~~l~--~P~~iavdp~~G~ly~tD~g~~---~~--I~r~~ 464 (619)
T 3s94_A 402 VARNLYWTDTGT--------DRIEVTRLNGTMRKILIS--EDLE--EPRAIVLDPMVGYMYWTDWGEI---PK--IERAA 464 (619)
T ss_dssp TTTEEEEEETTT--------TEEEEEETTSCSCEEEEC--TTCC--SEEEEEEETTTTEEEEEECSSS---CE--EEEEE
T ss_pred ccCcEEEEeCCC--------CcEEEEeCCCCeEEEEEE--CCCC--CeeeEEEEcCCCcEEEecCCCC---CE--EEEEc
Confidence 368999987654 689999998765444421 1121 22334443 589988775432 23 44444
Q ss_pred cCCCCCCeEEEEEecCCCceeEeEEE--ee-CCcEEEEEEeeCCceEEEEEeCCCCeEEEE
Q 018497 267 EYGLTESWTKLYTIEKPQRIWWPLGF--TE-RGKIFIRGECRHGGYGLLVYNPHSDTFKCI 324 (355)
Q Consensus 267 ~~~~~~~W~~~~~i~~~~~~~~~~~~--~~-~g~i~~~~~~~~~~~~l~~yd~~t~~~~~v 324 (355)
-.+... . .+-... ...|.++ .. ++.||+. ....+ .+..+|++....+.+
T Consensus 465 ~dG~~~---~--~l~~~~-l~~P~GlalD~~~~~LY~a--D~~~~-~I~~~~~dG~~~~~~ 516 (619)
T 3s94_A 465 LDGSDR---V--VLVNTS-LGWPNGLALDYDEGKIYWG--DAKTD-KIEVMNTDGTGRRVL 516 (619)
T ss_dssp TTSCSC---E--EEECSS-CSCEEEEEEETTTTEEEEE--ETTTT-EEEEEESSSCCCEEE
T ss_pred cCCCcc---E--EEEeCC-CCCCeeeEEcccCCEEEEE--ECCCC-EEEEEecCCCceEEE
Confidence 322211 1 111111 1334444 32 3477777 42333 488888876665554
No 242
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=30.25 E-value=3.6e+02 Score=25.59 Aligned_cols=96 Identities=17% Similarity=0.259 Sum_probs=57.6
Q ss_pred cEEEEEEcCCceeeEecCCCCCCCCCCceEEEEE-CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCcee
Q 018497 209 WLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF-DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIW 287 (355)
Q Consensus 209 ~~Il~fD~~~~~~~~i~lP~~~~~~~~~~~L~~~-~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~ 287 (355)
..|..+|+.+.+.... +. .+.. ....+.-. +|++.+.+..+ ..+.||.+... ..+..+.... ..
T Consensus 541 ~~v~vwd~~~~~~~~~-~~-~h~~--~v~~v~~spdg~~l~sg~~D----g~i~iwd~~~~------~~~~~~~~~~-~v 605 (694)
T 3dm0_A 541 KTVKVWNLSNCKLRST-LA-GHTG--YVSTVAVSPDGSLCASGGKD----GVVLLWDLAEG------KKLYSLEANS-VI 605 (694)
T ss_dssp SCEEEEETTTCCEEEE-EC-CCSS--CEEEEEECTTSSEEEEEETT----SBCEEEETTTT------EEEECCBCSS-CE
T ss_pred CeEEEEECCCCcEEEE-Ec-CCCC--CEEEEEEeCCCCEEEEEeCC----CeEEEEECCCC------ceEEEecCCC-cE
Confidence 4788899987765432 11 1111 12233333 47776666655 48999988751 2334443322 34
Q ss_pred EeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEEE
Q 018497 288 WPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFKC 323 (355)
Q Consensus 288 ~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~~~~ 323 (355)
..+++..++.++.. . .+. .+.+||+++++...
T Consensus 606 ~~~~~sp~~~~l~~--~-~~~-~i~iwd~~~~~~~~ 637 (694)
T 3dm0_A 606 HALCFSPNRYWLCA--A-TEH-GIKIWDLESKSIVE 637 (694)
T ss_dssp EEEEECSSSSEEEE--E-ETT-EEEEEETTTTEEEE
T ss_pred EEEEEcCCCcEEEE--E-cCC-CEEEEECCCCCChh
Confidence 55667777777776 5 455 39999999988643
No 243
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=30.13 E-value=3.6e+02 Score=25.53 Aligned_cols=110 Identities=12% Similarity=0.098 Sum_probs=52.7
Q ss_pred CcEEEEEEcCCceeeEecCCCCCCCCCCceEEEEE-CCe-EEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCc
Q 018497 208 PWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF-DGY-LCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQR 285 (355)
Q Consensus 208 ~~~Il~fD~~~~~~~~i~lP~~~~~~~~~~~L~~~-~G~-L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~ 285 (355)
...|..+|+.+.+...+... ... ......+.-+ +|+ |++....... ....|+..+-.. .........-.....
T Consensus 234 ~~~l~~~d~~~~~~~~~~~~-~~~-~~~~~~~~~spdg~~l~~~~~~~~~--~~~~v~~~d~~~-g~~~~~~~~~~~~~~ 308 (706)
T 2z3z_A 234 HVTVGIYHLATGKTVYLQTG-EPK-EKFLTNLSWSPDENILYVAEVNRAQ--NECKVNAYDAET-GRFVRTLFVETDKHY 308 (706)
T ss_dssp EEEEEEEETTTTEEEECCCC-SCT-TCEEEEEEECTTSSEEEEEEECTTS--CEEEEEEEETTT-CCEEEEEEEEECSSC
T ss_pred eeEEEEEECCCCceEeeccC-CCC-ceeEeeEEEECCCCEEEEEEeCCCC--CeeEEEEEECCC-CceeeEEEEccCCCe
Confidence 35799999998887665432 111 1111222222 465 5544443321 344455544321 113333332221110
Q ss_pred --eeEeEEEee--CCcEEEEEEeeCCc-eEEEEEeCCCCeEEEE
Q 018497 286 --IWWPLGFTE--RGKIFIRGECRHGG-YGLLVYNPHSDTFKCI 324 (355)
Q Consensus 286 --~~~~~~~~~--~g~i~~~~~~~~~~-~~l~~yd~~t~~~~~v 324 (355)
....+.+.. +|++++. ...++ ..++.+|..++.++.+
T Consensus 309 ~~~~~~~~~sp~~dg~~l~~--~~~~g~~~l~~~~~~~~~~~~l 350 (706)
T 2z3z_A 309 VEPLHPLTFLPGSNNQFIWQ--SRRDGWNHLYLYDTTGRLIRQV 350 (706)
T ss_dssp CCCCSCCEECTTCSSEEEEE--ECTTSSCEEEEEETTSCEEEEC
T ss_pred ECccCCceeecCCCCEEEEE--EccCCccEEEEEECCCCEEEec
Confidence 112355666 7876666 31232 2588888777766655
No 244
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=29.67 E-value=2.6e+02 Score=23.80 Aligned_cols=56 Identities=13% Similarity=0.226 Sum_probs=34.8
Q ss_pred cEEEEEEeccCCCCCCeEEEEEecC---C---CceeEeEEEeeCCcEEEEEEeeCC---ceEEEEEeCCCCeEE
Q 018497 258 RSYELWVMKEYGLTESWTKLYTIEK---P---QRIWWPLGFTERGKIFIRGECRHG---GYGLLVYNPHSDTFK 322 (355)
Q Consensus 258 ~~l~iW~l~~~~~~~~W~~~~~i~~---~---~~~~~~~~~~~~g~i~~~~~~~~~---~~~l~~yd~~t~~~~ 322 (355)
..+.+|.++. . .....+.. . ......+.+..++..++. ...+ + .+..||+++++..
T Consensus 207 g~i~i~d~~~----~--~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~--~~~d~~~g-~i~i~d~~~~~~~ 271 (397)
T 1sq9_A 207 GTVQISELST----L--RPLYNFESQHSMINNSNSIRSVKFSPQGSLLAI--AHDSNSFG-CITLYETEFGERI 271 (397)
T ss_dssp SEEEEEETTT----T--EEEEEEECCC---CCCCCEEEEEECSSTTEEEE--EEEETTEE-EEEEEETTTCCEE
T ss_pred CcEEEEECCC----C--ceeEEEeccccccccCCccceEEECCCCCEEEE--EecCCCCc-eEEEEECCCCccc
Confidence 5899999875 1 23334433 1 113555666777877776 4244 5 5999999887653
No 245
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=29.15 E-value=3e+02 Score=24.26 Aligned_cols=92 Identities=8% Similarity=0.119 Sum_probs=51.3
Q ss_pred cEEEEEEcCCceeeEe---cCCCCCCCCCCceEEEEECCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCc
Q 018497 209 WLIVSFDFAKEIFQTV---MMPYDLSTDDADKYLNVFDGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQR 285 (355)
Q Consensus 209 ~~Il~fD~~~~~~~~i---~lP~~~~~~~~~~~L~~~~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~ 285 (355)
..|..+|+.+.+...+ .+| ..... . ..-+...|.+.+....+ .++.||-++. . ..+.++.....
T Consensus 260 ~tIklWd~~tgk~l~v~~~~~p-~Gh~~-~-~lsg~~sg~~lASgS~D----gTIkIWDl~t----G--k~l~tL~gH~~ 326 (356)
T 2w18_A 260 FQLIVINPKTTLSVGVMLYCLP-PGQAG-R-FLEGDVKDHCAAAILTS----GTIAIWDLLL----G--QCTALLPPVSD 326 (356)
T ss_dssp EEEEEEETTTTEEEEEEEECCC-TTCCC-C-EEEEEEETTEEEEEETT----SCEEEEETTT----C--SEEEEECCC--
T ss_pred cEEEEEECCCCEEEEEEEeecc-CCCcc-e-eEccccCCCEEEEEcCC----CcEEEEECCC----C--cEEEEecCCCC
Confidence 4666788887765332 345 33221 1 11122235666655555 4999999975 2 23445432211
Q ss_pred -eeEeEEEeeCCcEEEEEEeeCCceEEEEEeC
Q 018497 286 -IWWPLGFTERGKIFIRGECRHGGYGLLVYNP 316 (355)
Q Consensus 286 -~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~ 316 (355)
....+++..+|+.++. ...|+ ++.+||.
T Consensus 327 ~vvs~vafSPDG~~LaS--GS~D~-TIklWd~ 355 (356)
T 2w18_A 327 QHWSFVKWSGTDSHLLA--GQKDG-NIFVYHY 355 (356)
T ss_dssp CCCCEEEECSSSSEEEE--ECTTS-CEEEEEE
T ss_pred CeEEEEEECCCCCEEEE--EECCC-cEEEecC
Confidence 1334677888988887 43566 4888874
No 246
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=28.69 E-value=2.5e+02 Score=23.15 Aligned_cols=102 Identities=11% Similarity=0.043 Sum_probs=50.5
Q ss_pred cEEEEEEcCCceee-EecCCCCCCCCCCceEEEEE-CCe-EEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCc
Q 018497 209 WLIVSFDFAKEIFQ-TVMMPYDLSTDDADKYLNVF-DGY-LCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQR 285 (355)
Q Consensus 209 ~~Il~fD~~~~~~~-~i~lP~~~~~~~~~~~L~~~-~G~-L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~ 285 (355)
..|..+|+.+.+.. .+.++ ..... ...+... +|+ |++..... ..+.+|-++. .+-.....+.....
T Consensus 11 ~~v~~~d~~~~~~~~~~~~~-~~~~~--~~~~~~s~dg~~l~v~~~~~----~~v~~~d~~~----~~~~~~~~~~~~~~ 79 (337)
T 1pby_B 11 DKLVVIDTEKMAVDKVITIA-DAGPT--PMVPMVAPGGRIAYATVNKS----ESLVKIDLVT----GETLGRIDLSTPEE 79 (337)
T ss_dssp TEEEEEETTTTEEEEEEECT-TCTTC--CCCEEECTTSSEEEEEETTT----TEEEEEETTT----CCEEEEEECCBTTE
T ss_pred CeEEEEECCCCcEEEEEEcC-CCCCC--ccceEEcCCCCEEEEEeCCC----CeEEEEECCC----CCeEeeEEcCCccc
Confidence 57889999887653 44555 31100 1122222 454 55544333 4777776653 11222222221000
Q ss_pred ---eeEeEEEeeCCcEEEEEEee-----------CCceEEEEEeCCCCeEEE
Q 018497 286 ---IWWPLGFTERGKIFIRGECR-----------HGGYGLLVYNPHSDTFKC 323 (355)
Q Consensus 286 ---~~~~~~~~~~g~i~~~~~~~-----------~~~~~l~~yd~~t~~~~~ 323 (355)
....+.+..+|+.++.. .. .++ .+..||+++++...
T Consensus 80 ~~~~~~~~~~s~dg~~l~~~-~~~~~~~~~~~~~~~~-~i~v~d~~~~~~~~ 129 (337)
T 1pby_B 80 RVKSLFGAALSPDGKTLAIY-ESPVRLELTHFEVQPT-RVALYDAETLSRRK 129 (337)
T ss_dssp EEECTTCEEECTTSSEEEEE-EEEEEECSSCEEECCC-EEEEEETTTTEEEE
T ss_pred ccccccceEECCCCCEEEEE-ecccccccccccccCc-eEEEEECCCCcEEE
Confidence 12235666777544441 10 134 59999999987643
No 247
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=28.47 E-value=2.9e+02 Score=23.91 Aligned_cols=92 Identities=11% Similarity=0.147 Sum_probs=51.5
Q ss_pred cEEEEEEcCCceeeEe-cCCCCCCCCCCceEEEEE--CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecC---
Q 018497 209 WLIVSFDFAKEIFQTV-MMPYDLSTDDADKYLNVF--DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEK--- 282 (355)
Q Consensus 209 ~~Il~fD~~~~~~~~i-~lP~~~~~~~~~~~L~~~--~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~--- 282 (355)
..|..+|+.+.+.... ... .. ...+... +|++.+++..++ .+.+|-++.. . ....+..
T Consensus 187 ~~v~iwd~~~~~~~~~~~~~-~~-----v~~~~~~~~~~~~l~~~s~d~----~v~iwd~~~~----~--~~~~~~~~~~ 250 (393)
T 1erj_A 187 RTVRIWDLRTGQCSLTLSIE-DG-----VTTVAVSPGDGKYIAAGSLDR----AVRVWDSETG----F--LVERLDSENE 250 (393)
T ss_dssp SEEEEEETTTTEEEEEEECS-SC-----EEEEEECSTTCCEEEEEETTS----CEEEEETTTC----C--EEEEEC----
T ss_pred CcEEEEECCCCeeEEEEEcC-CC-----cEEEEEECCCCCEEEEEcCCC----cEEEEECCCC----c--EEEeeccccc
Confidence 5889999988775433 322 11 1223332 577777666654 8999987641 1 1222211
Q ss_pred ---CC-ceeEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCC
Q 018497 283 ---PQ-RIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSD 319 (355)
Q Consensus 283 ---~~-~~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~ 319 (355)
.+ .....+.+..+|..++. ...++ .+.+||+++.
T Consensus 251 ~~~~h~~~v~~v~~~~~g~~l~s--~s~d~-~v~~wd~~~~ 288 (393)
T 1erj_A 251 SGTGHKDSVYSVVFTRDGQSVVS--GSLDR-SVKLWNLQNA 288 (393)
T ss_dssp --CCCSSCEEEEEECTTSSEEEE--EETTS-EEEEEEC---
T ss_pred CCCCCCCCEEEEEECCCCCEEEE--EeCCC-EEEEEECCCC
Confidence 11 13445666778877777 43566 4999998764
No 248
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=28.25 E-value=1.7e+02 Score=25.55 Aligned_cols=24 Identities=4% Similarity=-0.002 Sum_probs=20.7
Q ss_pred eCceEEEEEeeeccCCCCCCcEEEEEEcCCcee
Q 018497 189 LNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIF 221 (355)
Q Consensus 189 ~~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~ 221 (355)
.+|.+|.-..+. .+.++|..+++.
T Consensus 110 ~~g~Vy~Gs~~g---------~l~ald~~tG~~ 133 (339)
T 2be1_A 110 EDEKVYTGSMRT---------IMYTINMLNGEI 133 (339)
T ss_dssp CCEEEEECEEEE---------EEEEEETTTCCE
T ss_pred cCCEEEEEecCC---------EEEEEECCCCcE
Confidence 899999988876 899999987754
No 249
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=27.94 E-value=4.2e+02 Score=25.59 Aligned_cols=96 Identities=17% Similarity=0.281 Sum_probs=50.0
Q ss_pred EEEEEEcCCceeeEecCCCCCCCCCCceEEEEECCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEe--cCCCcee
Q 018497 210 LIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVFDGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTI--EKPQRIW 287 (355)
Q Consensus 210 ~Il~fD~~~~~~~~i~lP~~~~~~~~~~~L~~~~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i--~~~~~~~ 287 (355)
.+..||..+++|.. | ..........+...+|.|.+.+. .. +..++.. +......... .......
T Consensus 83 Gl~~yd~~~~~f~~---~-~~~~~~~i~~i~~~~g~lWigt~------~G--l~~~~~~--~~~~~~~~~~~~~l~~~~i 148 (758)
T 3ott_A 83 GILVYNYRADRYEQ---P-ETDFPTDVRTMALQGDTLWLGAL------NG--LYTYQLQ--SRKLTSFDTRRNGLPNNTI 148 (758)
T ss_dssp EEEEEETTTTEECC---C-SCCCCSCEEEEEEETTEEEEEET------TE--EEEEETT--TCCEEEECHHHHCCSCSCE
T ss_pred CeEEEeCCCCEEEC---c-ccCCCceEEEEEecCCcEEEEcC------Cc--ceeEeCC--CCeEEEeccCCCCcCCCeE
Confidence 68999999998864 2 11111112234456788877543 12 3344331 1233322110 0111123
Q ss_pred EeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEEEE
Q 018497 288 WPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFKCI 324 (355)
Q Consensus 288 ~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~~~~v 324 (355)
..+....+|.|++. . ..+ |+.||+++++++.+
T Consensus 149 ~~i~~d~~g~lWig--t-~~G--l~~~~~~~~~~~~~ 180 (758)
T 3ott_A 149 YSIIRTKDNQIYVG--T-YNG--LCRYIPSNGKFEGI 180 (758)
T ss_dssp EEEEECTTCCEEEE--E-TTE--EEEEETTTTEEEEE
T ss_pred EEEEEcCCCCEEEE--e-CCC--HhhCccCCCceEEe
Confidence 33444456788887 5 333 89999998887654
No 250
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=27.55 E-value=2.8e+02 Score=23.50 Aligned_cols=101 Identities=6% Similarity=-0.008 Sum_probs=50.8
Q ss_pred EEEEEEcCCceeeEecCCCCCCCCCCceEEEEECCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEec-CCCceeE
Q 018497 210 LIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVFDGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIE-KPQRIWW 288 (355)
Q Consensus 210 ~Il~fD~~~~~~~~i~lP~~~~~~~~~~~L~~~~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~-~~~~~~~ 288 (355)
.|+.-+=..++|+.+..+ ..........+....+.++++... . .|+.-+|. ...|.++.... .+.. ..
T Consensus 57 ~i~~s~DgG~tW~~~~~~-~~~~~~~~~~i~~~~~~~~~~g~~-----g--~i~~S~Dg--G~tW~~~~~~~~~~~~-~~ 125 (327)
T 2xbg_A 57 TLMETRDGGQTWEPRTLV-LDHSDYRFNSVSFQGNEGWIVGEP-----P--IMLHTTDG--GQSWSQIPLDPKLPGS-PR 125 (327)
T ss_dssp EEEEESSTTSSCEECCCC-CSCCCCEEEEEEEETTEEEEEEET-----T--EEEEESST--TSSCEECCCCTTCSSC-EE
T ss_pred eEEEeCCCCCCCeECCCC-CCCCCccEEEEEecCCeEEEEECC-----C--eEEEECCC--CCCceECccccCCCCC-eE
Confidence 454443345699998655 211111122344445777776432 1 34555553 36899875432 1111 22
Q ss_pred eEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEEEEE
Q 018497 289 PLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFKCIG 325 (355)
Q Consensus 289 ~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~~~~v~ 325 (355)
-+.+..++.+++. . ..+ .++.-+-..++|+.+.
T Consensus 126 ~i~~~~~~~~~~~--~-~~g-~v~~S~DgG~tW~~~~ 158 (327)
T 2xbg_A 126 LIKALGNGSAEMI--T-NVG-AIYRTKDSGKNWQALV 158 (327)
T ss_dssp EEEEEETTEEEEE--E-TTC-CEEEESSTTSSEEEEE
T ss_pred EEEEECCCCEEEE--e-CCc-cEEEEcCCCCCCEEee
Confidence 2333455666666 4 334 2555555566777664
No 251
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=26.71 E-value=4.4e+02 Score=25.43 Aligned_cols=188 Identities=13% Similarity=0.133 Sum_probs=92.8
Q ss_pred EEeeeCceEEEeecCCCCceEEEEcCCcccEEecCCCCCCCceeEEEEecCCCC----CCcEEEE-EEcCCCceeEeccC
Q 018497 97 VVGSCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGH----LDDFKVV-YSLRSNSWKNIAYG 171 (355)
Q Consensus 97 ~~~s~~GLl~l~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~g~d~~~~~----~~~ykvv-yss~t~~W~~~~~~ 171 (355)
++...+|.|-+.. ...++.+||.|+++.. |..........+. +.. +. +.. -+. |+..+++.+... .
T Consensus 68 i~~d~~g~lWigT----~~Gl~~yd~~~~~f~~-~~~~~~~~i~~i~-~~~-g~lWigt~~-Gl~~~~~~~~~~~~~~-~ 138 (758)
T 3ott_A 68 GVIIDNTYLYMGT----DNGILVYNYRADRYEQ-PETDFPTDVRTMA-LQG-DTLWLGALN-GLYTYQLQSRKLTSFD-T 138 (758)
T ss_dssp EEEETTTEEEEEE----TTEEEEEETTTTEECC-CSCCCCSCEEEEE-EET-TEEEEEETT-EEEEEETTTCCEEEEC-H
T ss_pred EEEcCCCcEEEEe----CCCeEEEeCCCCEEEC-cccCCCceEEEEE-ecC-CcEEEEcCC-cceeEeCCCCeEEEec-c
Confidence 3445577777665 2458889999987765 2211111111121 111 00 111 222 888888777652 1
Q ss_pred CCceeeeccccccceeEe--CceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEecCCCCCCC--CCCceEEEEEC-C-e
Q 018497 172 FPRSIEINRSHINSSVFL--NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLST--DDADKYLNVFD-G-Y 245 (355)
Q Consensus 172 ~p~~~~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i~lP~~~~~--~~~~~~L~~~~-G-~ 245 (355)
.........-. .++. +|.+ |++... .|..||..++++..+..| .... ......+.+.. | .
T Consensus 139 ~~~~l~~~~i~---~i~~d~~g~l-Wigt~~---------Gl~~~~~~~~~~~~~~~~-~~~~~~~~~i~~i~~d~~~~~ 204 (758)
T 3ott_A 139 RRNGLPNNTIY---SIIRTKDNQI-YVGTYN---------GLCRYIPSNGKFEGIPLP-VHSSQSNLFVNSLLEDTTRQC 204 (758)
T ss_dssp HHHCCSCSCEE---EEEECTTCCE-EEEETT---------EEEEEETTTTEEEEECCC-CCTTCSSCCEEEEEEETTTTE
T ss_pred CCCCcCCCeEE---EEEEcCCCCE-EEEeCC---------CHhhCccCCCceEEecCC-CccccccceeEEEEEECCCCE
Confidence 10000000000 3333 4555 554433 689999999999887766 4321 11123344443 4 4
Q ss_pred EEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEEEE
Q 018497 246 LCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFKCI 324 (355)
Q Consensus 246 L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~~~~v 324 (355)
|.+... + . +..++.. ...+.....++.. ....+....+|.|.+. . .++ ++.||.++++++.+
T Consensus 205 lWigt~--~----G--l~~~~~~--~~~~~~~~~l~~~--~i~~i~~d~~g~lWig--T-~~G--l~~~~~~~~~~~~~ 266 (758)
T 3ott_A 205 VWIGTE--G----Y--LFQYFPS--TGQIKQTEAFHNN--SIKSLALDGNGDLLAG--T-DNG--LYVYHNDTTPLQHI 266 (758)
T ss_dssp EEEEEE--E----E--EEEEETT--TTEEEEEEEEEEE--EEEEEEECTTCCEEEE--E-TTE--EEEECCTTSCCEEE
T ss_pred EEEEEC--C----C--CeEEcCC--CCeEEeccCCCCC--eEEEEEEcCCCCEEEE--e-CCc--eeEEecCCCcEEEE
Confidence 666442 1 2 3444431 2334433322211 2333444556778777 4 333 89999988877654
No 252
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=26.31 E-value=3.3e+02 Score=24.30 Aligned_cols=68 Identities=15% Similarity=0.161 Sum_probs=39.0
Q ss_pred CeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEEE
Q 018497 244 GYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFKC 323 (355)
Q Consensus 244 G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~~~~ 323 (355)
+.+.+....+ ..+.||-++.. ...............+++..+|+.++. ...++ .+..||++.+....
T Consensus 162 ~~~las~s~D----g~v~iwD~~~~------~~~~~~~~~~~~v~~v~wspdg~~las--gs~dg-~v~iwd~~~~~~~~ 228 (434)
T 2oit_A 162 PSMVAVCLAD----GSIAVLQVTET------VKVCATLPSTVAVTSVCWSPKGKQLAV--GKQNG-TVVQYLPTLQEKKV 228 (434)
T ss_dssp TTEEEEEETT----SCEEEEEESSS------EEEEEEECGGGCEEEEEECTTSSCEEE--EETTS-CEEEECTTCCEEEE
T ss_pred CCEEEEEECC----CeEEEEEcCCC------cceeeccCCCCceeEEEEcCCCCEEEE--EcCCC-cEEEEccCCccccc
Confidence 5566656555 48999998752 222221111113455666777866666 32666 49999998444433
Q ss_pred E
Q 018497 324 I 324 (355)
Q Consensus 324 v 324 (355)
+
T Consensus 229 ~ 229 (434)
T 2oit_A 229 I 229 (434)
T ss_dssp E
T ss_pred c
Confidence 3
No 253
>2dk7_A Transcription elongation regulator 1; structural genomics, WW domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.98 E-value=48 Score=21.81 Aligned_cols=19 Identities=16% Similarity=0.286 Sum_probs=15.4
Q ss_pred CCceEEEEcCCcccEEecC
Q 018497 113 DRSLIYLWNPLIKKYMTLP 131 (355)
Q Consensus 113 ~~~~~~V~NP~T~~~~~LP 131 (355)
.+++.|.+||.|++...--
T Consensus 28 ~dGR~fyyN~~Tk~S~Wek 46 (73)
T 2dk7_A 28 GDERVFFYNPTTRLSMWDR 46 (73)
T ss_dssp SSSCEEEEETTTTEECSSC
T ss_pred CCCCEEEecCcccceeccC
Confidence 5788999999999887533
No 254
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=25.82 E-value=3.9e+02 Score=24.51 Aligned_cols=110 Identities=13% Similarity=0.076 Sum_probs=0.0
Q ss_pred CCcEEEEEEcCCcee-eEecCCCCCCCCCCceEEEEEC-CeEEEEEec-----CCCCccEEEEEEeccCCCCCCeEEEEE
Q 018497 207 CPWLIVSFDFAKEIF-QTVMMPYDLSTDDADKYLNVFD-GYLCVFATI-----PNNTFRSYELWVMKEYGLTESWTKLYT 279 (355)
Q Consensus 207 ~~~~Il~fD~~~~~~-~~i~lP~~~~~~~~~~~L~~~~-G~L~~v~~~-----~~~~~~~l~iW~l~~~~~~~~W~~~~~ 279 (355)
..+.|..||+.+.+. +.|+++ .....-....++-.. |+..++... .. .++.+|..++ ..|.....
T Consensus 226 ~~d~V~v~D~~~~k~~~tI~vg-~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Ls---s~V~v~~~d~----g~~~~~~v 297 (462)
T 2ece_A 226 YGNRIHFWDLRKRKRIHSLTLG-EENRMALELRPLHDPTKLMGFINMVVSLKDLS---SSIWLWFYED----GKWNAEKV 297 (462)
T ss_dssp SCCEEEEEETTTTEEEEEEESC-TTEEEEEEEEECSSTTCCEEEEEEEEETTTCC---EEEEEEEEET----TEEEEEEE
T ss_pred cCCEEEEEECCCCcEeeEEecC-CCCCccceeEeeECCCCCEEEEEEeeeccCCC---ceEEEEEecC----CceeEEEE
Q ss_pred ecCCC------------------ceeEeEEEeeCCcEEEEEEeeCCceEEEEEeC-CCCeEEEEEE
Q 018497 280 IEKPQ------------------RIWWPLGFTERGKIFIRGECRHGGYGLLVYNP-HSDTFKCIGV 326 (355)
Q Consensus 280 i~~~~------------------~~~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~-~t~~~~~v~~ 326 (355)
|+... -...-+.++.+|+.+++ .-.....|.+||. +.++.+.+..
T Consensus 298 Idi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYV--Snrg~d~VavfdV~d~~~~~lv~~ 361 (462)
T 2ece_A 298 IEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYL--SLWGIGEVRQYDISNPFKPVLTGK 361 (462)
T ss_dssp EEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEE--EETTTTEEEEEECSSTTSCEEEEE
T ss_pred EeCCCccccccccccccccccCCCceeEEEECCCCCEEEE--EeCCCCEEEEEEecCCCCcEEEEE
No 255
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=25.80 E-value=4.3e+02 Score=25.06 Aligned_cols=111 Identities=12% Similarity=0.105 Sum_probs=57.2
Q ss_pred CceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEecCCCCCCCCCCceEEEEECCeEEEEEecCCCCccEEEEEEeccCC
Q 018497 190 NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVFDGYLCVFATIPNNTFRSYELWVMKEYG 269 (355)
Q Consensus 190 ~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i~lP~~~~~~~~~~~L~~~~G~L~~v~~~~~~~~~~l~iW~l~~~~ 269 (355)
+|.+||..... ..|.++|+....-+.+-. .....-....+-..+|.|++..... .-.||+..-.+
T Consensus 95 ~~~ly~~d~~~--------~~I~v~~~dG~~~~~l~~--~~l~~P~~Iavdp~~g~ly~tD~g~-----~~~I~r~~~dG 159 (619)
T 3s94_A 95 GEKLYWTDSET--------NRIEVSNLDGSLRKVLFW--QELDQPRAIALDPSSGFMYWTDWGE-----VPKIERAGMDG 159 (619)
T ss_dssp TTEEEEEETTT--------TEEEEEETTSCSCEEEEC--SSCSCCCCEEEETTTTEEEEEECSS-----SCEEEEEETTS
T ss_pred CCEEEEEeCCC--------CEEEEEECCCCCEEEEEe--CCCCCCceEEEecCCCeEEEeccCC-----CCEEEEEECCC
Confidence 68999987654 689999998765444321 1111102223333568888877432 23456665433
Q ss_pred CCCCeEEEEEecCCCceeEeEEEe--e-CCcEEEEEEeeCCceEEEEEeCCCCeEEEE
Q 018497 270 LTESWTKLYTIEKPQRIWWPLGFT--E-RGKIFIRGECRHGGYGLLVYNPHSDTFKCI 324 (355)
Q Consensus 270 ~~~~W~~~~~i~~~~~~~~~~~~~--~-~g~i~~~~~~~~~~~~l~~yd~~t~~~~~v 324 (355)
... ..+ +.. . ...|.+++ . ++.||+. ..... .+..+|++....+.+
T Consensus 160 ~~~--~~l--~~~-~-~~~P~Glald~~~~~LY~a--D~~~~-~I~~~~~dG~~~~~~ 208 (619)
T 3s94_A 160 SSR--FII--INS-E-IYWPNGLTLDYEEQKLYWA--DAKLN-FIHKSNLDGTNRQAV 208 (619)
T ss_dssp CSC--EEE--ECS-S-CSSEEEEEEETTTTEEEEE--ETTTC-CEEEESSSCCEEC--
T ss_pred Cce--EEE--EeC-C-CCCCcEEEEEccCCEEEEE--eCCCC-eEEEecCCCCccEEE
Confidence 211 111 111 1 13344443 2 3577777 42333 588888877655544
No 256
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=24.69 E-value=3.2e+02 Score=23.20 Aligned_cols=97 Identities=12% Similarity=0.061 Sum_probs=54.5
Q ss_pred cEEEEEEcCCceeeE-ecCCCCCCCCCCceEEEEE-CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCce
Q 018497 209 WLIVSFDFAKEIFQT-VMMPYDLSTDDADKYLNVF-DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRI 286 (355)
Q Consensus 209 ~~Il~fD~~~~~~~~-i~lP~~~~~~~~~~~L~~~-~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~ 286 (355)
..|..+|+.+.+... +.-. ........+... +|.+.+.+..++ .+.+|-++. .. .+..+......
T Consensus 176 ~~v~lwd~~~~~~~~~~~~h---~~~v~~~~~~~~~~g~~l~sgs~Dg----~v~~wd~~~----~~--~~~~~~~h~~~ 242 (354)
T 2pbi_B 176 GTCALWDVESGQLLQSFHGH---GADVLCLDLAPSETGNTFVSGGCDK----KAMVWDMRS----GQ--CVQAFETHESD 242 (354)
T ss_dssp SEEEEEETTTCCEEEEEECC---SSCEEEEEECCCSSCCEEEEEETTS----CEEEEETTT----CC--EEEEECCCSSC
T ss_pred CcEEEEeCCCCeEEEEEcCC---CCCeEEEEEEeCCCCCEEEEEeCCC----eEEEEECCC----Cc--EEEEecCCCCC
Confidence 578899998776532 2211 110011111112 356666666654 899998875 11 22333222213
Q ss_pred eEeEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeE
Q 018497 287 WWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTF 321 (355)
Q Consensus 287 ~~~~~~~~~g~i~~~~~~~~~~~~l~~yd~~t~~~ 321 (355)
...+.+..+|..++. ...++ .+..||+++++.
T Consensus 243 v~~v~~~p~~~~l~s--~s~D~-~v~lwd~~~~~~ 274 (354)
T 2pbi_B 243 VNSVRYYPSGDAFAS--GSDDA-TCRLYDLRADRE 274 (354)
T ss_dssp EEEEEECTTSSEEEE--EETTS-CEEEEETTTTEE
T ss_pred eEEEEEeCCCCEEEE--EeCCC-eEEEEECCCCcE
Confidence 555666777777776 43666 499999988754
No 257
>1ugj_A Riken cDNA 2310057J16 protein; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.41.1.3
Probab=24.30 E-value=1.9e+02 Score=21.72 Aligned_cols=29 Identities=10% Similarity=0.115 Sum_probs=19.0
Q ss_pred EEEeecCCCCceEEEEcCCcccEEecCCC
Q 018497 105 LCFCSNGSDRSLIYLWNPLIKKYMTLPRP 133 (355)
Q Consensus 105 l~l~~~~~~~~~~~V~NP~T~~~~~LP~~ 133 (355)
|++.+....-..+|.+||.+.+..+|-..
T Consensus 58 ILfrd~~~qfRalY~~~~~~e~~~Ki~G~ 86 (141)
T 1ugj_A 58 ILFRDSSCQFRALYTLSGETEELSRLAGY 86 (141)
T ss_dssp EEESSSSCSEEEEEEECTTSSCEEEEESS
T ss_pred EEEecCCCceEEEEEEeCCCceEEEEECC
Confidence 44444322345789999999888776543
No 258
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=23.69 E-value=3.4e+02 Score=23.11 Aligned_cols=106 Identities=10% Similarity=0.015 Sum_probs=52.5
Q ss_pred cEEEEEEcC-CceeeEe---cCCCCCCCCCCceEEEEE-CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEE-EEEe--
Q 018497 209 WLIVSFDFA-KEIFQTV---MMPYDLSTDDADKYLNVF-DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTK-LYTI-- 280 (355)
Q Consensus 209 ~~Il~fD~~-~~~~~~i---~lP~~~~~~~~~~~L~~~-~G~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~-~~~i-- 280 (355)
..|..||+. +++...+ .+| ... . ....++.. +|+..++..... ..+.+|.++.. ...... ...+
T Consensus 167 ~~v~~~~~~~~g~~~~~~~~~~~-~~g-~-~p~~~~~spdg~~l~v~~~~~---~~v~v~~~~~~--~g~~~~~~~~~~~ 238 (365)
T 1jof_A 167 NKLWTHRKLASGEVELVGSVDAP-DPG-D-HPRWVAMHPTGNYLYALMEAG---NRICEYVIDPA--THMPVYTHHSFPL 238 (365)
T ss_dssp TEEEEEEECTTSCEEEEEEEECS-STT-C-CEEEEEECTTSSEEEEEETTT---TEEEEEEECTT--TCCEEEEEEEEES
T ss_pred CEEEEEEECCCCCEEEeeeEecC-CCC-C-CCCEeEECCCCCEEEEEECCC---CeEEEEEEeCC--CCcEEEccceEEc
Confidence 589999998 6766443 333 211 1 12233333 465444444333 58899988742 122322 1222
Q ss_pred -cCC--C-c-------eeEeEE-EeeCCcEEEEEEeeCCc----eEEEEEeCC-CCeEEE
Q 018497 281 -EKP--Q-R-------IWWPLG-FTERGKIFIRGECRHGG----YGLLVYNPH-SDTFKC 323 (355)
Q Consensus 281 -~~~--~-~-------~~~~~~-~~~~g~i~~~~~~~~~~----~~l~~yd~~-t~~~~~ 323 (355)
+.. . . ...-++ +..+|+.++.. .+... ..+.+||++ ++++..
T Consensus 239 ~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~-~~~~~~~~~~~i~v~~~~~~g~~~~ 297 (365)
T 1jof_A 239 IPPGIPDRDPETGKGLYRADVCALTFSGKYMFAS-SRANKFELQGYIAGFKLRDCGSIEK 297 (365)
T ss_dssp SCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEE-EEESSTTSCCEEEEEEECTTSCEEE
T ss_pred CCCCcCCcccccccccccccEEEECCCCCEEEEE-CCCCCCCCCCeEEEEEECCCCCEEE
Confidence 211 0 0 133456 67888644441 21121 048889885 677765
No 259
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=23.32 E-value=4.5e+02 Score=24.32 Aligned_cols=114 Identities=8% Similarity=0.123 Sum_probs=62.7
Q ss_pred eeEeC----ceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEe-cCCCCCCCCCCceEEEE--------ECCe-EEEEEe
Q 018497 186 SVFLN----GSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTV-MMPYDLSTDDADKYLNV--------FDGY-LCVFAT 251 (355)
Q Consensus 186 ~v~~~----G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i-~lP~~~~~~~~~~~L~~--------~~G~-L~~v~~ 251 (355)
++.++ |.||...... ..|..+|+.++..+.+ ... .. .......++. .+|+ |++...
T Consensus 143 ~la~dp~~~~~Lyv~~~~~--------~~i~~ID~~~~~v~~l~~~~-~~-~~~~p~~ia~~~~~~~~d~~G~~lyvad~ 212 (496)
T 3kya_A 143 RLAFDPLNKDHLYICYDGH--------KAIQLIDLKNRMLSSPLNIN-TI-PTNRIRSIAFNKKIEGYADEAEYMIVAID 212 (496)
T ss_dssp EEEEETTEEEEEEEEEETE--------EEEEEEETTTTEEEEEECCT-TS-SCSBEEEEEECCCBTTTBCTTCEEEEEEC
T ss_pred EEEEccCCCCEEEEEECCC--------CeEEEEECCCCEEEEEEccC-cc-ccCCCcEEEEeecccccCCCCCEEEEEeC
Confidence 55555 7888887654 5799999999888776 443 21 1111233433 2465 777766
Q ss_pred cCCCCccEEEEEEeccCCCCCCeE------EEEEecCCCceeEeEEEee-CCcEEEEEEeeCCceEEEEEeCC
Q 018497 252 IPNNTFRSYELWVMKEYGLTESWT------KLYTIEKPQRIWWPLGFTE-RGKIFIRGECRHGGYGLLVYNPH 317 (355)
Q Consensus 252 ~~~~~~~~l~iW~l~~~~~~~~W~------~~~~i~~~~~~~~~~~~~~-~g~i~~~~~~~~~~~~l~~yd~~ 317 (355)
..+.......|..++... ...|. .+.... . ..-+++.. ++.||+. ....+ .++.||++
T Consensus 213 ~~~~~~~~~~V~~i~r~~-~G~~~~~~~~~~v~~~~--~--p~giavdp~~g~LYvt--d~~~g-~V~r~d~~ 277 (496)
T 3kya_A 213 YDGKGDESPSVYIIKRNA-DGTFDDRSDIQLIAAYK--Q--CNGATIHPINGELYFN--SYEKG-QVFRLDLV 277 (496)
T ss_dssp CCTTGGGEEEEEEEECCT-TSCCSTTSCEEEEEEES--C--CCCEEECTTTCCEEEE--ETTTT-EEEEECHH
T ss_pred CCCCcccCceEEEEecCC-CCceeecccceeeccCC--C--ceEEEEcCCCCeEEEE--ECCCC-EEEEEecc
Confidence 542101245555654321 12443 222222 1 12244555 5688888 63445 59999998
No 260
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=23.30 E-value=3.8e+02 Score=23.55 Aligned_cols=99 Identities=15% Similarity=0.138 Sum_probs=56.5
Q ss_pred cEEEEE--EcCCceeeEe-cC--CC-CCCCCCCceEEEEE--CCeEEEEEecCCCCccEEEEEEeccCCCC-CCeEEEEE
Q 018497 209 WLIVSF--DFAKEIFQTV-MM--PY-DLSTDDADKYLNVF--DGYLCVFATIPNNTFRSYELWVMKEYGLT-ESWTKLYT 279 (355)
Q Consensus 209 ~~Il~f--D~~~~~~~~i-~l--P~-~~~~~~~~~~L~~~--~G~L~~v~~~~~~~~~~l~iW~l~~~~~~-~~W~~~~~ 279 (355)
+.|..| |+.+.+++.+ .. |+ .....-+..++-.. .|+++++..... ..+..|.+.+.+.. -.=.++.+
T Consensus 99 n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~---G~~~q~~l~~~~~g~~~~~lVR~ 175 (355)
T 3amr_A 99 NTIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKE---GEFEQYELKADKNGYISGKKVRA 175 (355)
T ss_dssp CEEEEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSS---SEEEEEEEEECTTSCEEEEEEEE
T ss_pred CeEEEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCC---CeEEEEEEEeCCCCcccceEEEE
Confidence 345555 7788888888 22 41 11122244444333 477777776665 69999999765322 12244677
Q ss_pred ecCCCceeEeEEEe---eCCcEEEEEEeeCCceEEEEEeCC
Q 018497 280 IEKPQRIWWPLGFT---ERGKIFIRGECRHGGYGLLVYNPH 317 (355)
Q Consensus 280 i~~~~~~~~~~~~~---~~g~i~~~~~~~~~~~~l~~yd~~ 317 (355)
+.+... +-++. ..|.||+. . .+. .+..||.+
T Consensus 176 f~lgsq---~EgcvvDd~~g~Lyv~--e-Ed~-GIw~~da~ 209 (355)
T 3amr_A 176 FKMNSQ---TEGMAADDEYGRLYIA--E-EDE-AIWKFSAE 209 (355)
T ss_dssp EECSSC---EEEEEEETTTTEEEEE--E-TTT-EEEEEECS
T ss_pred ecCCCC---cceEEEcCCCCeEEEe--c-ccc-eEEEEeCC
Confidence 776542 33332 23567776 4 455 49999954
No 261
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=23.14 E-value=5e+02 Score=24.79 Aligned_cols=122 Identities=9% Similarity=0.049 Sum_probs=64.0
Q ss_pred EeCceEEEEEeeeccCCCCCCcEEEEEEcCCc--eeeEecCCCCCCCCCCceEEEEECCeEEEEEecCCCCccEEEEEEe
Q 018497 188 FLNGSVHWCARFSCYHDNSCPWLIVSFDFAKE--IFQTVMMPYDLSTDDADKYLNVFDGYLCVFATIPNNTFRSYELWVM 265 (355)
Q Consensus 188 ~~~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~--~~~~i~lP~~~~~~~~~~~L~~~~G~L~~v~~~~~~~~~~l~iW~l 265 (355)
.-+|..-.+.... ......|..+|+.+. .+..+.-+ ... ....+..-+++|++....+. ....|+.+
T Consensus 242 SpDg~~l~~~~~~----~~~~~~i~~~d~~~~~~~~~~l~~~-~~~---~~~~~~~~g~~l~~~t~~~~---~~~~l~~~ 310 (693)
T 3iuj_A 242 TEDDRFLLISAAN----STSGNRLYVKDLSQENAPLLTVQGD-LDA---DVSLVDNKGSTLYLLTNRDA---PNRRLVTV 310 (693)
T ss_dssp CTTSCEEEEEEES----SSSCCEEEEEETTSTTCCCEEEECS-SSS---CEEEEEEETTEEEEEECTTC---TTCEEEEE
T ss_pred cCCCCEEEEEEcc----CCCCcEEEEEECCCCCCceEEEeCC-CCc---eEEEEeccCCEEEEEECCCC---CCCEEEEE
Confidence 3466644443332 122357888888765 66666433 221 11224455678877766543 24455555
Q ss_pred ccC-CCCCCeEEEEEecCCCceeEeEEEeeCC-cEEEEEEeeCCc-eEEEEEeCCCCeEEEEEEe
Q 018497 266 KEY-GLTESWTKLYTIEKPQRIWWPLGFTERG-KIFIRGECRHGG-YGLLVYNPHSDTFKCIGVH 327 (355)
Q Consensus 266 ~~~-~~~~~W~~~~~i~~~~~~~~~~~~~~~g-~i~~~~~~~~~~-~~l~~yd~~t~~~~~v~~~ 327 (355)
+-. +....|..+ ++...... .+..+| .|++. ...++ ..+..+|++++..+.+...
T Consensus 311 d~~~~~~~~~~~l--~~~~~~~~---~~s~~g~~lv~~--~~~~g~~~l~~~d~~g~~~~~l~~p 368 (693)
T 3iuj_A 311 DAANPGPAHWRDL--IPERQQVL---TVHSGSGYLFAE--YMVDATARVEQFDYEGKRVREVALP 368 (693)
T ss_dssp ETTSCCGGGCEEE--ECCCSSCE---EEEEETTEEEEE--EEETTEEEEEEECTTSCEEEEECCS
T ss_pred eCCCCCccccEEE--ecCCCCEE---EEEEECCEEEEE--EEECCeeEEEEEECCCCeeEEeecC
Confidence 432 223458753 22222112 444445 45555 32333 2699999998888777543
No 262
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=22.73 E-value=4.5e+02 Score=24.14 Aligned_cols=112 Identities=9% Similarity=0.072 Sum_probs=59.2
Q ss_pred eeEeCce-EEEEEeeeccCCCCCCcEEEEEEcCCceeeEe-cCCCCCCCCCCceEEEEECCeEEE-EEecCCCCccEEEE
Q 018497 186 SVFLNGS-VHWCARFSCYHDNSCPWLIVSFDFAKEIFQTV-MMPYDLSTDDADKYLNVFDGYLCV-FATIPNNTFRSYEL 262 (355)
Q Consensus 186 ~v~~~G~-lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i-~lP~~~~~~~~~~~L~~~~G~L~~-v~~~~~~~~~~l~i 262 (355)
++.-+|. +++..... ..+..+|+.+++...+ ..| . ..+. ..-+|+..+ ...... ..-.|
T Consensus 116 ~~s~dg~~~~~~s~~~--------~~~~l~d~~~g~~~~l~~~~-~-----~~~~-~spDG~~la~~~~~~~---~~~~i 177 (582)
T 3o4h_A 116 SGVDTGEAVVFTGATE--------DRVALYALDGGGLRELARLP-G-----FGFV-SDIRGDLIAGLGFFGG---GRVSL 177 (582)
T ss_dssp EEEECSSCEEEEEECS--------SCEEEEEEETTEEEEEEEES-S-----CEEE-EEEETTEEEEEEEEET---TEEEE
T ss_pred eeCCCCCeEEEEecCC--------CCceEEEccCCcEEEeecCC-C-----ceEE-ECCCCCEEEEEEEcCC---CCeEE
Confidence 4556663 44443332 2344789988877665 444 2 1222 233565544 333322 23446
Q ss_pred EEeccCCCCCCeEEEEEecCCCceeEeEEEeeCCcEEEEEEeeCCc-eEEEEEeCCCCeEE
Q 018497 263 WVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGG-YGLLVYNPHSDTFK 322 (355)
Q Consensus 263 W~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~-~~l~~yd~~t~~~~ 322 (355)
|.++-.. .++.. +...........+..+|+.++. ...++ ..++.+|+++++.+
T Consensus 178 ~~~d~~~--g~~~~---l~~~~~~~~~~~~SpDG~~l~~--~~~~~~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 178 FTSNLSS--GGLRV---FDSGEGSFSSASISPGMKVTAG--LETAREARLVTVDPRDGSVE 231 (582)
T ss_dssp EEEETTT--CCCEE---ECCSSCEEEEEEECTTSCEEEE--EECSSCEEEEEECTTTCCEE
T ss_pred EEEcCCC--CCceE---eecCCCccccceECCCCCEEEE--ccCCCeeEEEEEcCCCCcEE
Confidence 6665322 23332 2222113445667788866655 32343 25999999999887
No 263
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=20.61 E-value=5.3e+02 Score=24.14 Aligned_cols=121 Identities=7% Similarity=-0.061 Sum_probs=65.9
Q ss_pred eEeCceEEEEEeeeccCCCCCCcEEEEEEcCCceeeE-ecC-CCCCCCCCCceEEEEEC-CeEEEEEecCCCCccEEEEE
Q 018497 187 VFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQT-VMM-PYDLSTDDADKYLNVFD-GYLCVFATIPNNTFRSYELW 263 (355)
Q Consensus 187 v~~~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~-i~l-P~~~~~~~~~~~L~~~~-G~L~~v~~~~~~~~~~l~iW 263 (355)
..-+|..++.+... .+.|.++|+.+.+... +++ . .....+....+..-+ |.+++...... ..+.++
T Consensus 349 ~~pdgr~~~va~~~-------sn~V~ViD~~t~kl~~~i~vgg-~~Phpg~g~~~~~p~~g~v~~t~~~g~---~~Vsvi 417 (567)
T 1qks_A 349 LDGSHRYFITAANA-------RNKLVVIDTKEGKLVAIEDTGG-QTPHPGRGANFVHPTFGPVWATSHMGD---DSVALI 417 (567)
T ss_dssp ECTTSCEEEEEEGG-------GTEEEEEETTTTEEEEEEECSS-SSBCCTTCEEEEETTTEEEEEEEBSSS---SEEEEE
T ss_pred ECCCCCEEEEEeCC-------CCeEEEEECCCCcEEEEEeccC-cCCCCccceeeECCCCCcEEEeCCCCC---CeEEEe
Confidence 34467766665543 3689999999987643 344 2 111111223343333 56665554333 477777
Q ss_pred EeccC-CCCCCeEEEEEecCCCceeEeEEEeeCCcEEEEEEee-C-C---ceEEEEEeCCCC
Q 018497 264 VMKEY-GLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECR-H-G---GYGLLVYNPHSD 319 (355)
Q Consensus 264 ~l~~~-~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~-~-~---~~~l~~yd~~t~ 319 (355)
-.+.. .....|..+.+|+........+..+.+++-+++. .+ . + ...+.+||.++.
T Consensus 418 d~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~-~~~~~~~~~~~~v~v~d~~~~ 478 (567)
T 1qks_A 418 GTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVD-ATLNPEAEISGSVAVFDIKAM 478 (567)
T ss_dssp ECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEE-CTTCSSHHHHTCEEEEEGGGC
T ss_pred cCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEe-cCCCCCcccCceEEEEECCcc
Confidence 66531 1124599999987653111224456777544441 21 1 1 125999998866
No 264
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=20.56 E-value=5.2e+02 Score=24.09 Aligned_cols=118 Identities=12% Similarity=0.099 Sum_probs=63.5
Q ss_pred CceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEe-cCCCCCCC-CCC---ceEEEEE-CCeEEEEEecCCCCccEEEEE
Q 018497 190 NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTV-MMPYDLST-DDA---DKYLNVF-DGYLCVFATIPNNTFRSYELW 263 (355)
Q Consensus 190 ~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i-~lP~~~~~-~~~---~~~L~~~-~G~L~~v~~~~~~~~~~l~iW 263 (355)
||.+|+..... ....|..+|+.+.++..+ ... .... ..+ ...+... +|++.+.... + ...||
T Consensus 252 dg~l~~~~~~~------~~~~l~~~~~~~~~~~~l~~~~-~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~----~~~l~ 319 (662)
T 3azo_A 252 DGSLIVATDRT------GWWNLHRVDPATGAATQLCRRE-EEFAGPLWTPGMRWFAPLANGLIAVVHGK-G----AAVLG 319 (662)
T ss_dssp TSCEEEEECTT------SSCEEEEECTTTCCEEESSCCS-SBSSCCCCSTTCCSEEECTTSCEEEEEBS-S----SCEEE
T ss_pred CCeEEEEECCC------CCeEEEEEECCCCceeeccccc-ccccCccccccCceEeEeCCCEEEEEEEc-C----ccEEE
Confidence 78888766543 234799999988877665 322 1110 000 1123333 5777766654 4 67899
Q ss_pred EeccCCCCCCeEEEEEecCCCceeEeEEEeeCCcEEEEEEeeCCc-eEEEEEeCCCCeEEEEE
Q 018497 264 VMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGG-YGLLVYNPHSDTFKCIG 325 (355)
Q Consensus 264 ~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~-~~l~~yd~~t~~~~~v~ 325 (355)
.++..+ .. ..++.........+.....+.+++.... .+. ..++.+|+++++.+.+.
T Consensus 320 ~~d~~~--~~---~~~l~~~~~~~~~~~s~~~~~~~~~~~~-~~~~~~i~~~d~~~g~~~~l~ 376 (662)
T 3azo_A 320 ILDPES--GE---LVDAAGPWTEWAATLTVSGTRAVGVAAS-PRTAYEVVELDTVTGRARTIG 376 (662)
T ss_dssp EEETTT--TE---EEECCSSCCEEEEEEEEETTEEEEEEEE-TTEEEEEEEEETTTCCEEEEE
T ss_pred EEECCC--Cc---EEEecCCCCeEEEEEecCCCEEEEEEcC-CCCCCEEEEEECCCCceEEee
Confidence 887532 22 2344332212333311223456665211 222 16889999999887773
No 265
>2jp2_A Spred-2, sprouty-related, EVH1 domain-containing protein 2; solution structure, structural genomics, structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=20.28 E-value=1.1e+02 Score=22.43 Aligned_cols=44 Identities=5% Similarity=0.017 Sum_probs=27.5
Q ss_pred ceEEEEcCCcccEEecCCCCCCCceeEEEE-----ecCCCCCCcEEEE-EEcCCC
Q 018497 115 SLIYLWNPLIKKYMTLPRPSLNPRYLGFGV-----NSVSGHLDDFKVV-YSLRSN 163 (355)
Q Consensus 115 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~g~-----d~~~~~~~~ykvv-yss~t~ 163 (355)
..++++||.++.|...-.. ....+.+.+ |.. .+.|+|+ ++..++
T Consensus 20 A~Vm~~D~~~~~W~p~~~g--~ls~v~v~~~~~~~d~~---~~~yrI~~~~l~d~ 69 (126)
T 2jp2_A 20 AVVMTRDDSSGGWFPQEGG--GISRVGVCKVMHPEGNG---RSGFLIHGERQKDK 69 (126)
T ss_dssp EEEEEECTTSSSSEECSCC--SCEEEEEECCBCTTCSS---CBCEEEEEEESSSS
T ss_pred EEEeeEcCCCCCEeeCCCC--CcccEEEEEecCCCCCC---CCEEEEEEEEcCCC
Confidence 3578889999998655432 222233333 445 7889998 776544
No 266
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=20.05 E-value=4e+02 Score=22.53 Aligned_cols=119 Identities=8% Similarity=0.107 Sum_probs=58.4
Q ss_pred CceEEEEEeeeccCCCCCCcEEEEEEcCCceeeEecCCCCCCCC-----CCceEEEEE-CCeEEEEEecCC-CCccEEEE
Q 018497 190 NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTD-----DADKYLNVF-DGYLCVFATIPN-NTFRSYEL 262 (355)
Q Consensus 190 ~G~lyw~~~~~~~~~~~~~~~Il~fD~~~~~~~~i~lP~~~~~~-----~~~~~L~~~-~G~L~~v~~~~~-~~~~~l~i 262 (355)
+|.+|.-.... . . ....|..+| +.+. .++| ..... .....+... +|+|+++..... ....++.+
T Consensus 27 ~g~~~v~~~~~--~-~-~~~~l~~~~--~g~~--~~~p-~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~ 97 (343)
T 2qe8_A 27 DGRLFLSLHQF--Y-Q-PEMQVAELT--QDGL--IPFP-PQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVA 97 (343)
T ss_dssp TSCEEEEECGG--G-C-CSCSEEEEE--TTEE--EESC-CCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEE
T ss_pred CCCEEEEeCCC--C-C-CceEEEEEC--CCCe--ecCC-CcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEE
Confidence 78887764321 0 0 013677777 4443 3455 32111 122234433 389999875410 00135655
Q ss_pred EEeccCCCCCCeEEEEEecCCCc----eeEeEEEee-CCcEEEEEEeeC---CceEEEEEeCCCCeEEEE
Q 018497 263 WVMKEYGLTESWTKLYTIEKPQR----IWWPLGFTE-RGKIFIRGECRH---GGYGLLVYNPHSDTFKCI 324 (355)
Q Consensus 263 W~l~~~~~~~~W~~~~~i~~~~~----~~~~~~~~~-~g~i~~~~~~~~---~~~~l~~yd~~t~~~~~v 324 (355)
|-++. .+-.+...++.... ...-+++.. +|.+|+. . . ....+.+||+++++..++
T Consensus 98 ~d~~t----g~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvt--d-~~~~~~~~i~v~d~~~g~~~r~ 160 (343)
T 2qe8_A 98 WDTLN----NQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYIS--D-PAPDDKAALIRVDLQTGLAARV 160 (343)
T ss_dssp EETTT----TEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEE--E-CCSGGGCEEEEEETTTCCEEEE
T ss_pred EECCC----CeEEEEEECChhhcccccccceEEEecCCCEEEEE--c-CccCCCCeEEEEECCCCCEEEE
Confidence 55542 22233333321110 223355553 4578887 4 2 222699999998876554
Done!