BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>018500
MYLFSEEMKKSGVNNNNNNNNTSAEEHSDTFPSPGAPKGWSSERVPHPTSSSRRHISAAS
LTPFYSGRALPSKWEDAERWICSPVSGYGLGLTNKNSLHSQFQRRPKSKSGPIVPPPPRM
HNSIYSPSTGMQVLDGGRVKNFVAGSPFSTGVLVADRISGNFYGQGFLLHNGSYAARSRT
SNVPGSGWSDLASDDSSPSSQDEKLDDIPDAEAVVSRVVSRRDMATQMSPESSTNSSPRG
KSSFSPAVRSVAELQNDHPAKLEVREVQIDKGSTTISWSKRHRSRRIKSGFPDVDKFYQN
VTGTCAPSLDLSEVAASISKLQREEAKITAWENLQRAKAEAAIRKLEVSNFYSLA

High Scoring Gene Products

Symbol, full name Information P value
AT4G36970 protein from Arabidopsis thaliana 1.6e-56
AT1G45207 protein from Arabidopsis thaliana 1.5e-37
AT2G02170 protein from Arabidopsis thaliana 5.9e-08
AT1G67590 protein from Arabidopsis thaliana 9.9e-08
AT1G30320 protein from Arabidopsis thaliana 5.8e-07
AT1G53860 protein from Arabidopsis thaliana 2.8e-05

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  018500
        (355 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2115085 - symbol:AT4G36970 "AT4G36970" species...   582  1.6e-56   1
TAIR|locus:1005716683 - symbol:AT1G45207 "AT1G45207" spec...   403  1.5e-37   1
TAIR|locus:2051673 - symbol:AT2G02170 "AT2G02170" species...   124  5.9e-08   2
TAIR|locus:2008625 - symbol:AT1G67590 "AT1G67590" species...   109  9.9e-08   2
TAIR|locus:2204197 - symbol:AT1G30320 "AT1G30320" species...   113  5.8e-07   2
TAIR|locus:2197081 - symbol:AT1G53860 "AT1G53860" species...   106  2.8e-05   3


>TAIR|locus:2115085 [details] [associations]
            symbol:AT4G36970 "AT4G36970" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005886
            "plasma membrane" evidence=ISM;IDA] [GO:0009507 "chloroplast"
            evidence=IDA] Pfam:PF03763 GO:GO:0005886 GO:GO:0009507
            EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:Z99707 EMBL:AL161590
            InterPro:IPR005516 EMBL:AY150393 IPI:IPI00530871 PIR:F85436
            RefSeq:NP_568012.1 UniGene:At.4642 UniGene:At.4643 IntAct:O23188
            PRIDE:O23188 EnsemblPlants:AT4G36970.1 GeneID:829851
            KEGG:ath:AT4G36970 TAIR:At4g36970 eggNOG:NOG272009
            HOGENOM:HOG000005670 InParanoid:O23188 OMA:SSSWDIS PhylomeDB:O23188
            ProtClustDB:CLSN2714874 Genevestigator:O23188 Uniprot:O23188
        Length = 427

 Score = 582 (209.9 bits), Expect = 1.6e-56, P = 1.6e-56
 Identities = 170/360 (47%), Positives = 198/360 (55%)

Query:    22 TSAEEHS-DTFPSPGAP-----KGWSSERVPHP---TSSS-----RRHI--SAASLTPFY 65
             TS   +S   F SPGAP     KGWSSERVPHP   TSSS     RRHI  S+A  TPFY
Sbjct:     4 TSVSSNSFGGFLSPGAPSYADNKGWSSERVPHPSSTTSSSAINGGRRHIGSSSALTTPFY 63

Query:    66 SGRALPSKWEDAERWICSPVSGYGLGLTNKNSLHSQFQRRPKSKSGPIVPPP-PRMHNSI 124
             SGRA+PSKWEDAERWICSPVS Y  G+   +S+ S+ QRR KSKSGPIVPP  P  H + 
Sbjct:    64 SGRAIPSKWEDAERWICSPVSTYPQGVCLNSSVSSE-QRRQKSKSGPIVPPTLPHPHPTS 122

Query:   125 YSPSTG---------MQVLDGGRVKNFVAGSPFSTGVLVADRISGNFYGQGFLLHNGSYA 175
              S +TG         M+ +D       VAGSPFSTGVL ADR+   F G    +  G   
Sbjct:   123 SSSATGCYHYSPRMMMRSMDAPPKGLMVAGSPFSTGVLEADRV---FRGS---VGGGGCD 176

Query:   176 ARSRTSNVPGSGWXXX--XXXXXXXXXXXEKLDDIPDAE---AXXXXXXXXXDMATQMSP 230
                R    PG G                  K D    AE   A         DMATQMSP
Sbjct:   177 GYGRG---PGHGHSRSWVDLMSEETSSLSSKTDTEEKAEMTTAMQSPVVSRRDMATQMSP 233

Query:   231 ESSTNSSPRGKSSFSPAVRSVAELQNDHPAKLEVREVQIDKGSTTISWSKRH--RSRRIK 288
             E +   SP   +   P V SV E     P + EVREV++DKG+  I   KR    SR I+
Sbjct:   234 EET---SPNNNNQSPPLVVSVIE---PPPCRGEVREVKMDKGARMIKRPKRRVMSSRIIR 287

Query:   289 SGFPDVDKFYQNVTGTCAPSLDLSEVAASISKLQREEAKITAWENLQRAKAEAAIRKLEV 348
                P+V+    +     + S D+SE A ++SKLQREEAKI AWENLQ+AKAEAAIRKLEV
Sbjct:   288 REQPEVED--NSEASASSSSWDISEPAMTLSKLQREEAKIAAWENLQKAKAEAAIRKLEV 345


>TAIR|locus:1005716683 [details] [associations]
            symbol:AT1G45207 "AT1G45207" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0005886 "plasma membrane" evidence=IDA]
            Pfam:PF03763 EMBL:CP002684 GO:GO:0005886 InterPro:IPR005516
            IPI:IPI00530538 RefSeq:NP_973976.1 UniGene:At.44567 PRIDE:F4HRB5
            EnsemblPlants:AT1G45207.2 GeneID:841090 KEGG:ath:AT1G45207
            OMA:MSPEGSI PhylomeDB:F4HRB5 Uniprot:F4HRB5
        Length = 555

 Score = 403 (146.9 bits), Expect = 1.5e-37, P = 1.5e-37
 Identities = 124/338 (36%), Positives = 163/338 (48%)

Query:    28 SDTFPSPGAP-------KGWSSERVPHPTSSSRRHISAASLTPFYSGRALPSKWEDAERW 80
             S  FPSPG P       KGWSSERVP  ++  R   +A  L P YSGR +PSKWEDAERW
Sbjct:   181 SSVFPSPGTPTYLHSMQKGWSSERVPLRSNGGRSPPNAGFL-PLYSGRTVPSKWEDAERW 239

Query:    81 ICSPVSGYGLGLTNKNSLHSQFQRRPKSKSGPIVPPPPRMHNSIYSPSTGMQVLDGGRVK 140
             I SP++  G   T+  + H   +RRPK+KSGP+  PP   + S+YSP+  M  + GG + 
Sbjct:   240 IVSPLAKEGAARTSFGASH---ERRPKAKSGPL-GPPGFAYYSLYSPAVPM--VHGGNMG 293

Query:   141 NFVAGSPFSTGVLVADRISGNFYGQGFLLHNGSYAARSRTSNVPGSGWXXXXXXXXXXXX 200
                A SPFS GVL     S       F        ARS    V   G             
Sbjct:   294 GLTASSPFSAGVLPETVSSRGSTTAAFPQRIDPSMARS----VSIHGCSETLASSSQDDI 349

Query:   201 XXEKLDDIPDAEAXXXXXXXXXDMATQMSPESSTNSSPRGKSSFSPAVRS---VAELQND 257
                  D   DA+A         DMATQMSPE S   SP  + SFSP+  S   ++EL N 
Sbjct:   350 HESMKDAATDAQAVSRR-----DMATQMSPEGSIRFSPERQCSFSPSSPSPLPISELLNA 404

Query:   258 HPAKLEVREVQIDKGSTTISWSKRHRSRRIKSGFPDVDKFYQNVTGTCAPSLDLS---EV 314
             H  + EV+++Q+D+  T   WSK+HR     +G     K   +V G      DL+   E 
Sbjct:   405 HSNRAEVKDLQVDEKVTVTRWSKKHRGLYHGNG----SKMRDHVHGKATNHEDLTCATEE 460

Query:   315 AASIS--KLQREEAKITAWENLQRAKAEAAIRKLEVSN 350
             A  IS   LQ+ +A+  A   L++   +  + K   S+
Sbjct:   461 ARIISWENLQKAKAE-AAIRKLEKYFPQMKLEKKRSSS 497


>TAIR|locus:2051673 [details] [associations]
            symbol:AT2G02170 "AT2G02170" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005886
            "plasma membrane" evidence=ISM;IDA] [GO:0008150
            "biological_process" evidence=ND] Pfam:PF03763 GO:GO:0005886
            EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC005936
            InterPro:IPR005516 HOGENOM:HOG000238733 EMBL:AF385733 EMBL:BT003022
            IPI:IPI00526082 PIR:G84433 RefSeq:NP_001077869.1 RefSeq:NP_027421.1
            UniGene:At.13362 PRIDE:Q9ZUM1 EnsemblPlants:AT2G02170.1
            EnsemblPlants:AT2G02170.2 GeneID:814748 KEGG:ath:AT2G02170
            TAIR:At2g02170 eggNOG:NOG267380 InParanoid:Q9ZUM1 OMA:MKTRREI
            PhylomeDB:Q9ZUM1 ProtClustDB:CLSN2687932 ArrayExpress:Q9ZUM1
            Genevestigator:Q9ZUM1 Uniprot:Q9ZUM1
        Length = 486

 Score = 124 (48.7 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
 Identities = 38/125 (30%), Positives = 65/125 (52%)

Query:   229 SPESSTNSSPRGKSSFSP-AVRSVAELQNDHPAKLEVREVQIDKGSTTIS-W-SKRHRSR 285
             SP SS  SSP  ++S SP + + ++E +     + E+  +    G   I+ W SK    +
Sbjct:   295 SPISSEPSSPGRQASASPMSNKELSEKELQMKTRREIMVLGTQLGKFNIAAWASKEDEDK 354

Query:   286 RIKSGFPDVDKFY--QNVTGTCAPSLDLSEVAASISKLQREEAKITAWENLQRAKAEAAI 343
                +           ++V+   A + + +E A  +++ +REE KI AWEN Q+AK+EA +
Sbjct:   355 DASTSLKTKASLQTSKSVSEARATAWEEAEKAKHMARFRREEMKIQAWENHQKAKSEAEM 414

Query:   344 RKLEV 348
             +K EV
Sbjct:   415 KKTEV 419

 Score = 71 (30.1 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
 Identities = 18/62 (29%), Positives = 32/62 (51%)

Query:    25 EEHSDTFPSPGAPKGWSSERVPHPTSSSRRHISAASLTPFYSGRALPSKWEDAERWICSP 84
             +E+SD + +    K  S+  V     + +  ++       +S  A PSKW+DA++WI SP
Sbjct:    92 QEYSD-YDNVNEIKSVSASSVFEFQKTEKEKVNQRMPIRSFSKPA-PSKWDDAQKWIASP 149

Query:    85 VS 86
              +
Sbjct:   150 TA 151


>TAIR|locus:2008625 [details] [associations]
            symbol:AT1G67590 "AT1G67590" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISM;IDA] [GO:0005886 "plasma membrane"
            evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
            Pfam:PF03763 EMBL:CP002684 GO:GO:0005634 EMBL:AC008113
            UniGene:At.23765 EMBL:AC011020 InterPro:IPR005516 IPI:IPI00531181
            PIR:G96700 RefSeq:NP_564900.1 UniGene:At.35630 PRIDE:Q9SR48
            EnsemblPlants:AT1G67590.1 GeneID:843080 KEGG:ath:AT1G67590
            TAIR:At1g67590 InParanoid:Q9SR48 OMA:RAKFMAR PhylomeDB:Q9SR48
            ProtClustDB:CLSN2689063 Genevestigator:Q9SR48 Uniprot:Q9SR48
        Length = 347

 Score = 109 (43.4 bits), Expect = 9.9e-08, Sum P(2) = 9.9e-08
 Identities = 36/128 (28%), Positives = 60/128 (46%)

Query:   223 DMATQMSPESSTNSSPRGKSSFSPAVRSVAELQNDHPAKLEVREVQIDKGSTTISWSKRH 282
             DM T+M+P  S    P   ++   A   V       P +   R   +     T++  +R 
Sbjct:   151 DMGTEMTPIGS--QEPSRTATPVRATTPVGRSPVTSPVRASQRGEAVGVVMETVTEVRRV 208

Query:   283 RSRRIK--SGFPDVDKFYQNVTGTCAPSLDLSEVAASISKLQREEAKITAWENLQRAKAE 340
              S   +  +GF +  K    +    A + D +E A  +++ +REE KI AWEN ++ KAE
Sbjct:   209 ESNNSEKVNGFVESKKAMSAMEAR-AMAWDEAERAKFMARYKREEVKIQAWENHEKRKAE 267

Query:   341 AAIRKLEV 348
               ++K+EV
Sbjct:   268 MEMKKMEV 275

 Score = 81 (33.6 bits), Expect = 9.9e-08, Sum P(2) = 9.9e-08
 Identities = 25/80 (31%), Positives = 42/80 (52%)

Query:    38 KGWSSERVPHPTSSSRRHISAASLTPFYS----GRALPSKWEDAERWICSPVSGY---GL 90
             KGW     P   S+       ++ TP +     G+  PSKW+DA++W+ S V G+   G 
Sbjct:     9 KGWIGPATPE-ISNGFEFQKGSNRTPNHHRSTMGKPAPSKWDDAQKWL-SGV-GFARGGG 65

Query:    91 GLTNKNSLHSQFQRRPKSKS 110
             G  +K+S HS+   +P++ +
Sbjct:    66 GGGDKSSHHSR-SNKPRNSN 84


>TAIR|locus:2204197 [details] [associations]
            symbol:AT1G30320 "AT1G30320" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005737
            "cytoplasm" evidence=ISM] [GO:0005886 "plasma membrane"
            evidence=IDA] Pfam:PF03763 EMBL:CP002684 GenomeReviews:CT485782_GR
            GO:GO:0005886 EMBL:AC025295 InterPro:IPR005516 EMBL:BT006124
            EMBL:AK118811 IPI:IPI00542493 PIR:E86427 RefSeq:NP_174322.1
            UniGene:At.40574 PRIDE:Q9C8G3 EnsemblPlants:AT1G30320.1
            GeneID:839912 KEGG:ath:AT1G30320 TAIR:At1g30320 eggNOG:NOG317405
            HOGENOM:HOG000238733 InParanoid:Q9C8G3 OMA:DAEKWIM PhylomeDB:Q9C8G3
            ProtClustDB:CLSN2682078 Genevestigator:Q9C8G3 Uniprot:Q9C8G3
        Length = 509

 Score = 113 (44.8 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
 Identities = 34/125 (27%), Positives = 64/125 (51%)

Query:   229 SPESSTNSSPRG----KSSFSPAVR-SVAELQNDHPAKLEVREVQIDKGSTTIS-WSKRH 282
             SP SS  S+PRG    +SS S   R  ++E +     + E+  + +  G   I+ W+ + 
Sbjct:   317 SPTSSLPSTPRGGQPEESSMSKNTRRELSEEEEKAKTRREIVALGVQLGKMNIAAWASKE 376

Query:   283 RSRRIKSGFPDVDKFYQNVTGTCAPSLDLSEVAASISKLQREEAKITAWENLQRAKAEAA 342
                  K+   D ++  +      A + + +E +   ++ +REE +I AWE+ ++AK EA 
Sbjct:   377 EEENKKNN-GDAEEAQKIEFEKRATAWEEAEKSKHNARYKREEIRIQAWESQEKAKLEAE 435

Query:   343 IRKLE 347
             +R++E
Sbjct:   436 MRRIE 440

 Score = 74 (31.1 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
 Identities = 12/19 (63%), Positives = 14/19 (73%)

Query:    65 YSGRALPSKWEDAERWICS 83
             Y  R +PSKW DAE+WI S
Sbjct:   172 YPSRQMPSKWNDAEKWIMS 190


>TAIR|locus:2197081 [details] [associations]
            symbol:AT1G53860 "AT1G53860" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] Pfam:PF03763 EMBL:CP002684 GenomeReviews:CT485782_GR
            InterPro:IPR005516 EMBL:BT015079 EMBL:BT015903 IPI:IPI00548396
            RefSeq:NP_175789.2 UniGene:At.49976 EnsemblPlants:AT1G53860.1
            GeneID:841823 KEGG:ath:AT1G53860 TAIR:At1g53860 eggNOG:NOG276495
            HOGENOM:HOG000243896 InParanoid:Q6DBE3 OMA:IQAWVNL PhylomeDB:Q6DBE3
            ProtClustDB:CLSN2680758 Genevestigator:Q6DBE3 Uniprot:Q6DBE3
        Length = 442

 Score = 106 (42.4 bits), Expect = 2.8e-05, Sum P(3) = 2.8e-05
 Identities = 31/81 (38%), Positives = 40/81 (49%)

Query:   273 STTISWSKRHRSRR-IKSGFPDVD---KFYQNVTGTCAPSLDLSEVAASI-SKLQREEAK 327
             S T  W+ R      I       D   +  ++V+ + AP  D  +       + QREEAK
Sbjct:   289 SVTSHWNSREEEEEEISKSLRHFDMESELRRSVSESKAPLWDDEDDKIKFCQRYQREEAK 348

Query:   328 ITAWENLQRAKAEAAIRKLEV 348
             I AW NL+ AKAEA  RKLEV
Sbjct:   349 IQAWVNLENAKAEAQSRKLEV 369

 Score = 62 (26.9 bits), Expect = 2.8e-05, Sum P(3) = 2.8e-05
 Identities = 12/21 (57%), Positives = 15/21 (71%)

Query:    68 RALPSKWEDAERWICSPVSGY 88
             R  PSKW DAE+W+ S  SG+
Sbjct:   119 RNFPSKWIDAEKWVTS--SGH 137

 Score = 37 (18.1 bits), Expect = 2.8e-05, Sum P(3) = 2.8e-05
 Identities = 7/15 (46%), Positives = 10/15 (66%)

Query:   223 DMATQMSPESSTNSS 237
             DM T+M+P  S  +S
Sbjct:   222 DMGTEMTPIGSVTTS 236


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.311   0.127   0.373    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      355       324   0.00086  116 3  11 23  0.47    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  619 (66 KB)
  Total size of DFA:  224 KB (2121 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  30.86u 0.12s 30.98t   Elapsed:  00:00:02
  Total cpu time:  30.86u 0.12s 30.98t   Elapsed:  00:00:02
  Start:  Mon May 20 15:58:06 2013   End:  Mon May 20 15:58:08 2013

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