BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018502
(355 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O34990|PURU_BACSU Formyltetrahydrofolate deformylase OS=Bacillus subtilis (strain
168) GN=purU PE=3 SV=2
Length = 300
Score = 189 bits (481), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 112/313 (35%), Positives = 171/313 (54%), Gaps = 45/313 (14%)
Query: 49 CPDEVGIVAKLSECIASRGGNILAADVFVPE-KKNVFYSRSEFIFDPIKWPREQMDEDFF 107
CPD+ GIV+ +S + G NI+ ++ + + + F+ R EF I+ + + F
Sbjct: 26 CPDQPGIVSAVSAFLFEHGANIIESNQYTTDPEGGRFFLRIEFDCAGIREKKSSLQAAFA 85
Query: 108 KLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDR 167
+++ F+ S+ ++ +VA+ SK+ HCL + ++ WQ G L EI VISNH+
Sbjct: 86 SVAEKFDMTWSLTLASELK---RVAIFVSKELHCLHELIWEWQTGNLMAEIAVVISNHEE 142
Query: 168 GPNSHVIRFLERHGIPYHYLCAKENER---EEELLELVQ--NTDFLVLARYMQPVPLQKE 222
+ER IP+HY+ A ++ R E++ LEL++ + D +VLARYMQ
Sbjct: 143 AR-----ELVERLNIPFHYMKANKDIRAEVEKKQLELLEQYDVDVIVLARYMQ------- 190
Query: 223 AYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDA 282
IL+ F+ ++ +INIHH LP+F G P K+A++
Sbjct: 191 -----------------------ILTPDFVSAHPNRIINIHHSFLPAFIGANPYKRAYER 227
Query: 283 GVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCEL 342
GVKLIGATSH+VT +LD GPIIEQ +ERV HRDN +E+ LA+A+K + E
Sbjct: 228 GVKLIGATSHYVTNDLDEGPIIEQDIERVDHRDNAEALKNIGRTIERSVLARAVKWHLED 287
Query: 343 RVLPYEMNKTVVF 355
RV+ +E NKT+VF
Sbjct: 288 RVIVHE-NKTIVF 299
>sp|Q55135|PURU_SYNY3 Formyltetrahydrofolate deformylase OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=purU PE=3 SV=1
Length = 284
Score = 181 bits (458), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 111/312 (35%), Positives = 171/312 (54%), Gaps = 45/312 (14%)
Query: 49 CPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFK 108
CPD+ GIVA++++ I GNI+ AD +F +R E+ D + R ++ + +
Sbjct: 12 CPDQPGIVAQIAQFIYQNQGNIIHADQHTDFSSGLFLNRVEWQLDNFRLSRPELLSAWSQ 71
Query: 109 LSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRG 168
L++ A + D P+ +A+ SKQ+HCL+D L+ W+ G+L EI +ISNH
Sbjct: 72 LAEQLQATWQI-HFSDQLPR--LALWVSKQDHCLLDILWRWRSGELRCEIPLIISNH--- 125
Query: 169 PNSHVIRFLERHGIPYHYL-CAKENEREEELLELV----QNTDFLVLARYMQPVPLQKEA 223
P+ I ++ GI +H L KEN+ +E EL D +VLA+Y+Q
Sbjct: 126 PDLKSIA--DQFGIDFHCLPITKENKLAQETAELALLKQYQIDLVVLAKYLQ-------- 175
Query: 224 YLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAG 283
IL+ F+ + ++INIHH LP+F G P +A + G
Sbjct: 176 ----------------------ILTTDFVVQF-PNIINIHHSFLPAFPGANPYHRAHERG 212
Query: 284 VKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELR 343
VK+IGAT+H+ T +LD GPIIEQ V RVSHRDN+ ++K D+E+ LA+A++ + + R
Sbjct: 213 VKIIGATAHYATAQLDEGPIIEQDVVRVSHRDNVDDLIRKGRDLERVVLARAVRLHLQHR 272
Query: 344 VLPYEMNKTVVF 355
+L Y+ N+TVVF
Sbjct: 273 ILVYD-NRTVVF 283
>sp|P0A5T6|PURU_MYCTU Formyltetrahydrofolate deformylase OS=Mycobacterium tuberculosis
GN=purU PE=3 SV=1
Length = 310
Score = 161 bits (408), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 109/318 (34%), Positives = 164/318 (51%), Gaps = 49/318 (15%)
Query: 46 VFHCPDEVGIVAKLSECIASRGGNILAAD--VFVPEKKNVFYSRSEFIFDPIKWPREQMD 103
+ C D GI+A +S +A G NI++ D PE F R+ F + +++
Sbjct: 34 LLRCHDRPGIIAAVSTFLARAGANIISLDQHSTAPEG-GTFLQRAIFHLPGLTAAVDELQ 92
Query: 104 EDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVIS 163
DF S + + R + +VA++AS ++HCL+D L+ + G+L + + VI+
Sbjct: 93 RDFG--STVADKFGIDYRFAEAAKPKRVAIMASTEDHCLLDLLWRNRRGELEMSVVMVIA 150
Query: 164 NHDRGPN--SHVIRFLERHGIPYHYLCAKENEREE----ELLELVQNTDFLVLARYMQPV 217
NH P+ +HV F G+P+ ++ A + R E +L L N D +VLARYMQ
Sbjct: 151 NH---PDLAAHVRPF----GVPFIHIPATRDTRTEAEQRQLQLLSGNVDLVVLARYMQ-- 201
Query: 218 PLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAK 277
ILS FL + G +INIHH LP+F G P +
Sbjct: 202 ----------------------------ILSPGFLEAIGCPLINIHHSFLPAFTGAAPYQ 233
Query: 278 QAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIK 337
+A + GVKLIGAT+H+VTE LD GPIIEQ V RV H + V+ DVE+ L++A+
Sbjct: 234 RARERGVKLIGATAHYVTEVLDEGPIIEQDVVRVDHTHTVDDLVRVGADVERAVLSRAVL 293
Query: 338 SYCELRVLPYEMNKTVVF 355
+C+ RV+ + N+T+VF
Sbjct: 294 WHCQDRVIVHH-NQTIVF 310
>sp|P0A5T7|PURU_MYCBO Formyltetrahydrofolate deformylase OS=Mycobacterium bovis (strain
ATCC BAA-935 / AF2122/97) GN=purU PE=3 SV=1
Length = 310
Score = 161 bits (408), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 109/318 (34%), Positives = 164/318 (51%), Gaps = 49/318 (15%)
Query: 46 VFHCPDEVGIVAKLSECIASRGGNILAAD--VFVPEKKNVFYSRSEFIFDPIKWPREQMD 103
+ C D GI+A +S +A G NI++ D PE F R+ F + +++
Sbjct: 34 LLRCHDRPGIIAAVSTFLARAGANIISLDQHSTAPEG-GTFLQRAIFHLPGLTAAVDELQ 92
Query: 104 EDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVIS 163
DF S + + R + +VA++AS ++HCL+D L+ + G+L + + VI+
Sbjct: 93 RDFG--STVADKFGIDYRFAEAAKPKRVAIMASTEDHCLLDLLWRNRRGELEMSVVMVIA 150
Query: 164 NHDRGPN--SHVIRFLERHGIPYHYLCAKENEREE----ELLELVQNTDFLVLARYMQPV 217
NH P+ +HV F G+P+ ++ A + R E +L L N D +VLARYMQ
Sbjct: 151 NH---PDLAAHVRPF----GVPFIHIPATRDTRTEAEQRQLQLLSGNVDLVVLARYMQ-- 201
Query: 218 PLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAK 277
ILS FL + G +INIHH LP+F G P +
Sbjct: 202 ----------------------------ILSPGFLEAIGCPLINIHHSFLPAFTGAAPYQ 233
Query: 278 QAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIK 337
+A + GVKLIGAT+H+VTE LD GPIIEQ V RV H + V+ DVE+ L++A+
Sbjct: 234 RARERGVKLIGATAHYVTEVLDEGPIIEQDVVRVDHTHTVDDLVRVGADVERAVLSRAVL 293
Query: 338 SYCELRVLPYEMNKTVVF 355
+C+ RV+ + N+T+VF
Sbjct: 294 WHCQDRVIVHH-NQTIVF 310
>sp|Q03432|PURU_HAEIN Formyltetrahydrofolate deformylase OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=purU PE=3
SV=2
Length = 278
Score = 145 bits (366), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 107/316 (33%), Positives = 155/316 (49%), Gaps = 57/316 (18%)
Query: 49 CPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEF--IFDPIKWPREQMDEDF 106
CPD+ G++AK++ NIL + FV + F+ R+E IF+ + ED
Sbjct: 11 CPDDKGLIAKITNICYKHQLNILHNNEFVDFETKHFFMRTELEGIFN-----EATLLEDL 65
Query: 107 -FKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNH 165
+ L + N R+ K ++ +L +K+ HCL D L G L VEI VI NH
Sbjct: 66 KYSLPEETNC-----RLIGTQRK-RIVILVTKEAHCLGDILMKNYYGALDVEIAAVIGNH 119
Query: 166 DRGPNSHVIRFLERHGIPYHYLCAKEN----EREEELLELVQ--NTDFLVLARYMQPVPL 219
D ++ +ER IP+H L + EN E ++ L E + D++VLA+YM+
Sbjct: 120 D-----NLRELVERFNIPFH-LVSHENLTRVEHDKLLAEKIDEYTPDYIVLAKYMR---- 169
Query: 220 QKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQA 279
+L+ +F+ Y VINIHH LP+F G KP +QA
Sbjct: 170 --------------------------VLNPEFVARYPNRVINIHHSFLPAFIGAKPYQQA 203
Query: 280 FDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSY 339
+ GVK+IGAT+HF+ ELD GPII Q V V H N ++ DVEK L++A+
Sbjct: 204 YKRGVKIIGATAHFINNELDQGPIIMQNVINVDHTYNAEAMMRAGRDVEKTVLSRALDLA 263
Query: 340 CELRVLPYEMNKTVVF 355
R+ Y+ NKTVV
Sbjct: 264 LHDRIFVYK-NKTVVL 278
>sp|Q46339|PURU_CORS1 Formyltetrahydrofolate deformylase OS=Corynebacterium sp. (strain
P-1) GN=purU PE=3 SV=1
Length = 286
Score = 145 bits (365), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 102/315 (32%), Positives = 153/315 (48%), Gaps = 44/315 (13%)
Query: 46 VFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDED 105
CP+ +GIV ++ + I+ + + R +F D + + +
Sbjct: 10 TLQCPEGIGIVHAVTGFLVRHQRTIVELKQYDDMSAGRLFLRVDFAGDSAPDLLDALRSE 69
Query: 106 FFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNH 165
F +++ F+ M +R + K KV ++ SK EHCL D L+ G LP+E+ V SNH
Sbjct: 70 FSEVAAKFD-MDWQLR--ERGQKTKVLIMVSKFEHCLQDLLFRMHSGDLPIEVVGVASNH 126
Query: 166 DRGPNSHVIRFLERHGIPYHYLCAKENER---EEELLELVQNT--DFLVLARYMQPVPLQ 220
P+ + +E +GI +H++ ++ + E LLEL+ T + +VLARYMQ
Sbjct: 127 ---PDHRSL--VEWYGIGFHHIPISKDTKPRAEAALLELIDQTGAELVVLARYMQ----- 176
Query: 221 KEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAF 280
L+ + L+GK INIHH LPSFKG KP QA+
Sbjct: 177 -----------------VLSDHLASELTGK--------TINIHHSFLPSFKGAKPYHQAW 211
Query: 281 DAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYC 340
+ GVK +GAT+H+V ELD GPII Q V V H + V D E + L+ A++ +C
Sbjct: 212 ERGVKTVGATAHYVNSELDEGPIIAQQVVEVDHTYGPQDLVAAGRDSECKALSNAVRWHC 271
Query: 341 ELRVLPYEMNKTVVF 355
E RV Y N+TVV
Sbjct: 272 EGRVFLYG-NRTVVL 285
>sp|P0A441|PURU_SHIFL Formyltetrahydrofolate deformylase OS=Shigella flexneri GN=purU
PE=3 SV=1
Length = 280
Score = 140 bits (352), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 151/317 (47%), Gaps = 59/317 (18%)
Query: 49 CPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFK 108
CPD+ G++A+++ NI+ + FV + F+ R+E E F
Sbjct: 13 CPDQKGLIARITNICYKHELNIVQNNEFVDHRTGRFFMRTEL-------------EGIFN 59
Query: 109 LSKMFNAMRSVV---RVPDIDP--KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVIS 163
S + + S + V +++P + ++ +L +K+ HCL D L G L VEI VI
Sbjct: 60 DSTLLADLDSALPEGSVRELNPAGRRRIVILVTKEAHCLGDLLMKANYGGLDVEIAAVIG 119
Query: 164 NHDRGPNSHVIRFLERHGIPYHYLCAK---ENEREEELLELVQ--NTDFLVLARYMQPVP 218
NHD + +ER IP+ + + NE ++++ + + D++VLA+YM+
Sbjct: 120 NHDT-----LRSLVERFDIPFELVSHEGLSRNEHDQKMADAIDAYQPDYVVLAKYMR--- 171
Query: 219 LQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQ 278
+L+ +F+ + +INIHH LP+F G +P Q
Sbjct: 172 ---------------------------VLTPEFVARFPNKIINIHHSFLPAFIGARPYHQ 204
Query: 279 AFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKS 338
A++ GVK+IGAT+H+V + LD GPII Q V V H ++ DVEK L++A+
Sbjct: 205 AYERGVKIIGATAHYVNDNLDEGPIIMQDVIHVDHTYTAEDMMRAGRDVEKNVLSRALYK 264
Query: 339 YCELRVLPYEMNKTVVF 355
RV Y N+T++
Sbjct: 265 VLAQRVFVYG-NRTIIL 280
>sp|P0A440|PURU_ECOL6 Formyltetrahydrofolate deformylase OS=Escherichia coli O6:H1
(strain CFT073 / ATCC 700928 / UPEC) GN=purU PE=3 SV=1
Length = 280
Score = 140 bits (352), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 151/317 (47%), Gaps = 59/317 (18%)
Query: 49 CPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFK 108
CPD+ G++A+++ NI+ + FV + F+ R+E E F
Sbjct: 13 CPDQKGLIARITNICYKHELNIVQNNEFVDHRTGRFFMRTEL-------------EGIFN 59
Query: 109 LSKMFNAMRSVV---RVPDIDP--KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVIS 163
S + + S + V +++P + ++ +L +K+ HCL D L G L VEI VI
Sbjct: 60 DSTLLADLDSALPEGSVRELNPAGRRRIVILVTKEAHCLGDLLMKANYGGLDVEIAAVIG 119
Query: 164 NHDRGPNSHVIRFLERHGIPYHYLCAK---ENEREEELLELVQ--NTDFLVLARYMQPVP 218
NHD + +ER IP+ + + NE ++++ + + D++VLA+YM+
Sbjct: 120 NHDT-----LRSLVERFDIPFELVSHEGLSRNEHDQKMADAIDAYQPDYVVLAKYMR--- 171
Query: 219 LQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQ 278
+L+ +F+ + +INIHH LP+F G +P Q
Sbjct: 172 ---------------------------VLTPEFVARFPNKIINIHHSFLPAFIGARPYHQ 204
Query: 279 AFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKS 338
A++ GVK+IGAT+H+V + LD GPII Q V V H ++ DVEK L++A+
Sbjct: 205 AYERGVKIIGATAHYVNDNLDEGPIIMQDVIHVDHTYTAEDMMRAGRDVEKNVLSRALYK 264
Query: 339 YCELRVLPYEMNKTVVF 355
RV Y N+T++
Sbjct: 265 VLAQRVFVYG-NRTIIL 280
>sp|P37051|PURU_ECOLI Formyltetrahydrofolate deformylase OS=Escherichia coli (strain K12)
GN=purU PE=1 SV=1
Length = 280
Score = 140 bits (352), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 151/317 (47%), Gaps = 59/317 (18%)
Query: 49 CPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFK 108
CPD+ G++A+++ NI+ + FV + F+ R+E E F
Sbjct: 13 CPDQKGLIARITNICYKHELNIVQNNEFVDHRTGRFFMRTEL-------------EGIFN 59
Query: 109 LSKMFNAMRSVV---RVPDIDP--KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVIS 163
S + + S + V +++P + ++ +L +K+ HCL D L G L VEI VI
Sbjct: 60 DSTLLADLDSALPEGSVRELNPAGRRRIVILVTKEAHCLGDLLMKANYGGLDVEIAAVIG 119
Query: 164 NHDRGPNSHVIRFLERHGIPYHYLCAK---ENEREEELLELVQ--NTDFLVLARYMQPVP 218
NHD + +ER IP+ + + NE ++++ + + D++VLA+YM+
Sbjct: 120 NHDT-----LRSLVERFDIPFELVSHEGLTRNEHDQKMADAIDAYQPDYVVLAKYMR--- 171
Query: 219 LQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQ 278
+L+ +F+ + +INIHH LP+F G +P Q
Sbjct: 172 ---------------------------VLTPEFVARFPNKIINIHHSFLPAFIGARPYHQ 204
Query: 279 AFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKS 338
A++ GVK+IGAT+H+V + LD GPII Q V V H ++ DVEK L++A+
Sbjct: 205 AYERGVKIIGATAHYVNDNLDEGPIIMQDVIHVDHTYTAEDMMRAGRDVEKNVLSRALYK 264
Query: 339 YCELRVLPYEMNKTVVF 355
RV Y N+T++
Sbjct: 265 VLAQRVFVYG-NRTIIL 280
>sp|P21872|PUR2_CHICK Trifunctional purine biosynthetic protein adenosine-3 OS=Gallus
gallus GN=GART PE=2 SV=1
Length = 1003
Score = 78.6 bits (192), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 91/210 (43%), Gaps = 27/210 (12%)
Query: 128 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYL 187
K KVAVL S L + ++ EI V+SN +R ER GIP +
Sbjct: 803 KVKVAVLISGTGTNLEALINSTKKPTSFAEIVLVVSNK---AGVEGLRKAERAGIPTRVI 859
Query: 188 CAKENEREEELLELVQNTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMIL 247
K+ E V ++LE S + + F IL
Sbjct: 860 DHKQYGSRTEFDSAVD------------------------RVLEEFSVELICLAGFMRIL 895
Query: 248 SGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQM 307
SG F++ + ++NIH LLPSFKG K +AGV++ G T HFV EE+DAG II Q
Sbjct: 896 SGPFVKKWEGKILNIHPSLLPSFKGANAHKLVLEAGVRVTGCTVHFVAEEVDAGAIIFQE 955
Query: 308 VERVSHRDNLRTFVQKSEDVEKQCLAKAIK 337
V D + T ++ ++ E + A++
Sbjct: 956 AVPVKIGDTVETLSERVKEAEHRAFPAALQ 985
>sp|Q59A32|PUR2_BOVIN Trifunctional purine biosynthetic protein adenosine-3 OS=Bos taurus
GN=GART PE=2 SV=1
Length = 1010
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 61/110 (55%)
Query: 228 KLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLI 287
++LE S+ + F ILSG F+R + ++NIH LLPSFKG +Q DAGV +
Sbjct: 880 EVLEEFSTDIVCLAGFMRILSGPFVRKWNGKMLNIHPSLLPSFKGSNAHEQVLDAGVTVT 939
Query: 288 GATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIK 337
G T HFV E++DAG II Q V D + T ++ + E + A++
Sbjct: 940 GCTVHFVAEDVDAGQIILQEAVPVKRGDTVETLSERVKLAEHKIFPSALQ 989
>sp|P12040|PUR3_BACSU Phosphoribosylglycinamide formyltransferase OS=Bacillus subtilis
(strain 168) GN=purN PE=3 SV=2
Length = 195
Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 54/105 (51%), Gaps = 1/105 (0%)
Query: 238 SLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEE 297
+L Y +I L++YG +INIH LLP+F G QAF AGVK+ G T H+V E
Sbjct: 85 ALAGYMRLI-GDTLLQAYGGKIINIHPSLLPAFPGIDAVGQAFRAGVKVAGITVHYVDEG 143
Query: 298 LDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCEL 342
+D GPII Q + D L T Q+ +E + IK L
Sbjct: 144 MDTGPIIAQKAIEIDEHDTLETIEQRIHKLEHKWYPSVIKQLLGL 188
>sp|Q64737|PUR2_MOUSE Trifunctional purine biosynthetic protein adenosine-3 OS=Mus
musculus GN=Gart PE=2 SV=3
Length = 1010
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 59/109 (54%)
Query: 229 LLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIG 288
+LE S + F ILSG F+R + ++NIH LLPSFKG +Q +AGV + G
Sbjct: 881 VLEEFSVDIVCLAGFMRILSGPFVRKWDGKMLNIHPSLLPSFKGSNAHEQVLEAGVTITG 940
Query: 289 ATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIK 337
T HFV E++DAG II Q V D + T ++ + E + A++
Sbjct: 941 CTVHFVAEDVDAGQIILQEAVPVRRGDTVATLSERVKVAEHKIFPAALQ 989
>sp|P22102|PUR2_HUMAN Trifunctional purine biosynthetic protein adenosine-3 OS=Homo
sapiens GN=GART PE=1 SV=1
Length = 1010
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 59/109 (54%)
Query: 229 LLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIG 288
+LE S + F ILSG F++ + ++NIH LLPSFKG +QA + GV + G
Sbjct: 881 VLEEFSIDIVCLAGFMRILSGPFVQKWNGKMLNIHPSLLPSFKGSNAHEQALETGVTVTG 940
Query: 289 ATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIK 337
T HFV E++DAG II Q V D + T ++ + E + A++
Sbjct: 941 CTVHFVAEDVDAGQIILQEAVPVKRGDTVATLSERVKLAEHKIFPAALQ 989
>sp|P43846|PUR3_HAEIN Phosphoribosylglycinamide formyltransferase OS=Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
GN=purN PE=3 SV=1
Length = 212
Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 92/221 (41%), Gaps = 39/221 (17%)
Query: 130 KVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCA 189
K+AVL S Q L + G +P +I CVISN +++ + ++ IP
Sbjct: 3 KIAVLISGQGTNLQTIIDACHSGDIPAKIACVISNK---ADAYGLVRAKQAQIPQAVFLR 59
Query: 190 KENEREEELLELVQN------TDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYF 243
K E+ + + + D +VLA YM+
Sbjct: 60 KNFSNNLEMDDAIGDYLQSLAVDLIVLAGYMK---------------------------- 91
Query: 244 NMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPI 303
IL+ KF + + ++NIH LLP + G ++A +AG G T HFV EE+D G I
Sbjct: 92 --ILTPKFTQRFAGKILNIHPSLLPKYAGLNTYQRAIEAGDNEHGTTVHFVNEEVDGGAI 149
Query: 304 IEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRV 344
+ Q + D++ ++ + E Q IK + E R+
Sbjct: 150 VLQAKVPIFPEDSIEEVEARTREQEYQIYPLVIKWFTEGRL 190
>sp|Q9K9Y6|FMT_BACHD Methionyl-tRNA formyltransferase OS=Bacillus halodurans (strain
ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
GN=fmt PE=3 SV=1
Length = 317
Score = 61.6 bits (148), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 66/137 (48%), Gaps = 4/137 (2%)
Query: 214 MQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGG 273
+QP ++ EA L + L S +T+ F IL L IN+H LLP ++GG
Sbjct: 60 LQPEKIRDEAEL--ERLFSFEPDLIVTAAFGQILPNALLEYPKHGCINVHASLLPKYRGG 117
Query: 274 KPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLA 333
P QA G K G T ++ E+LDAG I+ Q+ ++ D++ + K + LA
Sbjct: 118 APIHQAIIDGEKETGITIMYMAEKLDAGDILTQVTVPIADDDHVGSLHNKLSEAGAALLA 177
Query: 334 KAIKSYC--ELRVLPYE 348
K I EL+ +P +
Sbjct: 178 KTIPPLIKGELQSIPQD 194
>sp|Q5HPX5|FMT_STAEQ Methionyl-tRNA formyltransferase OS=Staphylococcus epidermidis
(strain ATCC 35984 / RP62A) GN=fmt PE=3 SV=1
Length = 310
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 56/113 (49%)
Query: 229 LLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIG 288
+L SL S +T+ F +L L + IN+H LLP ++GG P QA G + G
Sbjct: 73 VLLSLESDLIVTAAFGQLLPESLLNAPKLGAINVHASLLPKYRGGAPIHQAIIDGEEETG 132
Query: 289 ATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCE 341
T ++ ++LDAG II Q R+ DN+ T K + + L K + S +
Sbjct: 133 ITIMYMVKKLDAGNIISQQSIRIEEEDNVGTMHDKLSFLGAELLKKTLPSIID 185
>sp|O67890|FMT_AQUAE Methionyl-tRNA formyltransferase OS=Aquifex aeolicus (strain VF5)
GN=fmt PE=3 SV=1
Length = 303
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 55/122 (45%)
Query: 229 LLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIG 288
L+E L + + IL + L IN+H LLP ++G P ++A AG K G
Sbjct: 71 LVEELKPDCIVVVAYGKILPKEVLDLPPYKTINLHASLLPKYRGAAPIQRAIMAGEKETG 130
Query: 289 ATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPYE 348
T V EE+DAG I+ Q + DN T +K + L ++ + E +V P
Sbjct: 131 NTVMLVNEEMDAGDILAQEKIPIEEEDNFLTLSEKLAKSGAKLLVNTLRLWFEGKVKPVP 190
Query: 349 MN 350
N
Sbjct: 191 QN 192
>sp|Q8CSW1|FMT_STAES Methionyl-tRNA formyltransferase OS=Staphylococcus epidermidis
(strain ATCC 12228) GN=fmt PE=3 SV=1
Length = 310
Score = 58.9 bits (141), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 51/103 (49%)
Query: 239 LTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEEL 298
+T+ F +L L + IN+H LLP ++GG P QA G + G T ++ ++L
Sbjct: 83 VTAAFGQLLPESLLNAPKLGAINVHASLLPKYRGGAPIHQAIIDGEEETGITIMYMVKKL 142
Query: 299 DAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCE 341
DAG II Q R+ DN+ T K + + L K + S +
Sbjct: 143 DAGNIISQQSIRIEEEDNVGTMHDKLSFLGAELLKKTLPSIID 185
>sp|P64138|FMT_STRA5 Methionyl-tRNA formyltransferase OS=Streptococcus agalactiae
serotype V (strain ATCC BAA-611 / 2603 V/R) GN=fmt PE=3
SV=1
Length = 311
Score = 58.2 bits (139), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 1/122 (0%)
Query: 230 LESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGA 289
L +L + G +T+ F L K L S G IN+H LLP ++GG P A G K G
Sbjct: 76 LMTLGADGIVTAAFGQFLPTKLLESVGF-AINVHASLLPKYRGGAPIHYAIINGEKEAGV 134
Query: 290 TSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPYEM 349
T + ++DAG ++ + ++ DN+ T + V + L + Y + P
Sbjct: 135 TIMEMVAKMDAGDMVSKASVEITDEDNVGTMFDRLAVVGRDLLLDTLPGYLSGDIKPIPQ 194
Query: 350 NK 351
N+
Sbjct: 195 NE 196
>sp|P64137|FMT_STRA3 Methionyl-tRNA formyltransferase OS=Streptococcus agalactiae
serotype III (strain NEM316) GN=fmt PE=3 SV=1
Length = 311
Score = 58.2 bits (139), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 1/122 (0%)
Query: 230 LESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGA 289
L +L + G +T+ F L K L S G IN+H LLP ++GG P A G K G
Sbjct: 76 LMTLGADGIVTAAFGQFLPTKLLESVGF-AINVHASLLPKYRGGAPIHYAIINGEKEAGV 134
Query: 290 TSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPYEM 349
T + ++DAG ++ + ++ DN+ T + V + L + Y + P
Sbjct: 135 TIMEMVAKMDAGDMVSKASVEITDEDNVGTMFDRLAVVGRDLLLDTLPGYLSGDIKPIPQ 194
Query: 350 NK 351
N+
Sbjct: 195 NE 196
>sp|Q3K365|FMT_STRA1 Methionyl-tRNA formyltransferase OS=Streptococcus agalactiae
serotype Ia (strain ATCC 27591 / A909 / CDC SS700)
GN=fmt PE=3 SV=1
Length = 311
Score = 58.2 bits (139), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 1/122 (0%)
Query: 230 LESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGA 289
L +L + G +T+ F L K L S G IN+H LLP ++GG P A G K G
Sbjct: 76 LMTLGADGIVTAAFGQFLPTKLLESVGF-AINVHASLLPKYRGGAPIHYAIINGEKEAGV 134
Query: 290 TSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPYEM 349
T + ++DAG ++ + ++ DN+ T + V + L + Y + P
Sbjct: 135 TIMEMVAKMDAGDMVSKASVEITDEDNVGTMFDRLAVVGRDLLLDTLPGYLSGDIKPIPQ 194
Query: 350 NK 351
N+
Sbjct: 195 NE 196
>sp|B5YIL6|FMT_THEYD Methionyl-tRNA formyltransferase OS=Thermodesulfovibrio
yellowstonii (strain ATCC 51303 / DSM 11347 / YP87)
GN=fmt PE=3 SV=1
Length = 308
Score = 58.2 bits (139), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 61/122 (50%), Gaps = 2/122 (1%)
Query: 215 QPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGK 274
QP ++ + ++ K L+SL+ + ++ + IL + L IN+H LLP ++G
Sbjct: 63 QPEKMKDDNFI--KKLKSLNPEFAIVVAYGKILPKEILEIPKHGCINLHASLLPKYRGAA 120
Query: 275 PAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAK 334
P + A G K+ G T+ + E LD GPI+ Q ++ DN T +K V + + +
Sbjct: 121 PIQWALINGEKITGVTTMIIDEGLDTGPILLQKEISINDEDNAETLSEKLSVVGAELIIE 180
Query: 335 AI 336
I
Sbjct: 181 TI 182
>sp|P00967|PUR2_DROME Trifunctional purine biosynthetic protein adenosine-3 OS=Drosophila
melanogaster GN=ade3 PE=1 SV=2
Length = 1353
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 47/94 (50%)
Query: 243 FNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGP 302
F +LS F+R + ++NIH LLP + G KQA +AG K G T HFV E +D G
Sbjct: 1243 FMRVLSAPFVREWRGRLVNIHPSLLPKYPGLHVQKQALEAGEKESGCTVHFVDEGVDTGA 1302
Query: 303 IIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAI 336
II Q + D+ + Q+ E +A+
Sbjct: 1303 IIVQAAVPILPDDDEDSLTQRIHKAEHWAFPRAL 1336
>sp|A8Z3Q2|FMT_STAAT Methionyl-tRNA formyltransferase OS=Staphylococcus aureus (strain
USA300 / TCH1516) GN=fmt PE=3 SV=1
Length = 311
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 65/150 (43%), Gaps = 21/150 (14%)
Query: 212 RYMQPVPLQKEAYLGYKLL----ESLSSKGSL------------TSYFNMILSGKFLRSY 255
R M P P++K A + Y L E LS L T+ F +L L
Sbjct: 41 RVMTPPPVKKVA-MKYDLPVYQPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALP 99
Query: 256 GKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRD 315
IN+H LLP ++GG P QA G + G T ++ ++LDAG II Q ++ D
Sbjct: 100 NLGAINVHASLLPKYRGGAPIHQAIIDGEQETGITIMYMVKKLDAGNIISQQAIKIEEND 159
Query: 316 NLRTFVQK----SEDVEKQCLAKAIKSYCE 341
N+ T K D+ K+ L I+ E
Sbjct: 160 NVGTMHDKLSVLGADLLKETLPSIIEGTNE 189
>sp|A6QGB6|FMT_STAAE Methionyl-tRNA formyltransferase OS=Staphylococcus aureus (strain
Newman) GN=fmt PE=3 SV=1
Length = 311
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 65/150 (43%), Gaps = 21/150 (14%)
Query: 212 RYMQPVPLQKEAYLGYKLL----ESLSSKGSL------------TSYFNMILSGKFLRSY 255
R M P P++K A + Y L E LS L T+ F +L L
Sbjct: 41 RVMTPPPVKKVA-MKYDLPVYQPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALP 99
Query: 256 GKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRD 315
IN+H LLP ++GG P QA G + G T ++ ++LDAG II Q ++ D
Sbjct: 100 NLGAINVHASLLPKYRGGAPIHQAIIDGEQETGITIMYMVKKLDAGNIISQQAIKIEEND 159
Query: 316 NLRTFVQK----SEDVEKQCLAKAIKSYCE 341
N+ T K D+ K+ L I+ E
Sbjct: 160 NVGTMHDKLSVLGADLLKETLPSIIEGTNE 189
>sp|Q5HGL6|FMT_STAAC Methionyl-tRNA formyltransferase OS=Staphylococcus aureus (strain
COL) GN=fmt PE=3 SV=1
Length = 311
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 65/150 (43%), Gaps = 21/150 (14%)
Query: 212 RYMQPVPLQKEAYLGYKLL----ESLSSKGSL------------TSYFNMILSGKFLRSY 255
R M P P++K A + Y L E LS L T+ F +L L
Sbjct: 41 RVMTPPPVKKVA-MKYDLPVYQPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALP 99
Query: 256 GKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRD 315
IN+H LLP ++GG P QA G + G T ++ ++LDAG II Q ++ D
Sbjct: 100 NLGAINVHASLLPKYRGGAPIHQAIIDGEQETGITIMYMVKKLDAGNIISQQAIKIEEND 159
Query: 316 NLRTFVQK----SEDVEKQCLAKAIKSYCE 341
N+ T K D+ K+ L I+ E
Sbjct: 160 NVGTMHDKLSVLGADLLKETLPSIIEGTNE 189
>sp|Q2FZ68|FMT_STAA8 Methionyl-tRNA formyltransferase OS=Staphylococcus aureus (strain
NCTC 8325) GN=fmt PE=3 SV=1
Length = 311
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 65/150 (43%), Gaps = 21/150 (14%)
Query: 212 RYMQPVPLQKEAYLGYKLL----ESLSSKGSL------------TSYFNMILSGKFLRSY 255
R M P P++K A + Y L E LS L T+ F +L L
Sbjct: 41 RVMTPPPVKKVA-MKYDLPVYQPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALP 99
Query: 256 GKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRD 315
IN+H LLP ++GG P QA G + G T ++ ++LDAG II Q ++ D
Sbjct: 100 NLGAINVHASLLPKYRGGAPIHQAIIDGEQETGITIMYMVKKLDAGNIISQQAIKIEEND 159
Query: 316 NLRTFVQK----SEDVEKQCLAKAIKSYCE 341
N+ T K D+ K+ L I+ E
Sbjct: 160 NVGTMHDKLSVLGADLLKETLPSIIEGTNE 189
>sp|Q2FHM2|FMT_STAA3 Methionyl-tRNA formyltransferase OS=Staphylococcus aureus (strain
USA300) GN=fmt PE=3 SV=1
Length = 311
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 65/150 (43%), Gaps = 21/150 (14%)
Query: 212 RYMQPVPLQKEAYLGYKLL----ESLSSKGSL------------TSYFNMILSGKFLRSY 255
R M P P++K A + Y L E LS L T+ F +L L
Sbjct: 41 RVMTPPPVKKVA-MKYDLPVYQPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALP 99
Query: 256 GKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRD 315
IN+H LLP ++GG P QA G + G T ++ ++LDAG II Q ++ D
Sbjct: 100 NLGAINVHASLLPKYRGGAPIHQAIIDGEQETGITIMYMVKKLDAGNIISQQAIKIEEND 159
Query: 316 NLRTFVQK----SEDVEKQCLAKAIKSYCE 341
N+ T K D+ K+ L I+ E
Sbjct: 160 NVGTMHDKLSVLGADLLKETLPSIIEGTNE 189
>sp|Q5HH12|PUR3_STAAC Phosphoribosylglycinamide formyltransferase OS=Staphylococcus
aureus (strain COL) GN=purN PE=3 SV=1
Length = 188
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 83/184 (45%), Gaps = 40/184 (21%)
Query: 130 KVAVLASKQEHCLVDFLYGWQEGKLP-VEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188
K+A+ AS + + + GKL +E+T + ++H N+ I ++H IP +
Sbjct: 3 KIAIFASGSGSNFENIVEHVESGKLENIEVTALYTDHQ---NAFCIDRAKKHDIPVYINE 59
Query: 189 AKENER----EEELLELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSY 242
K+ + E+ L+ L+ ++++LA YM+ +G LL S K
Sbjct: 60 PKQFDSKAAYEQHLVTLLNEDKVEWIILAGYMR--------LIGPDLLASFEGK------ 105
Query: 243 FNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGP 302
++NIH LLP +KG QA+ +G + G+T H+V +D G
Sbjct: 106 ----------------ILNIHPSLLPKYKGIDAIGQAYHSGDTITGSTVHYVDSGMDTGE 149
Query: 303 IIEQ 306
IIEQ
Sbjct: 150 IIEQ 153
>sp|P16340|PUR2_DROPS Trifunctional purine biosynthetic protein adenosine-3 OS=Drosophila
pseudoobscura pseudoobscura GN=ade3 PE=3 SV=2
Length = 1364
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 88/209 (42%), Gaps = 49/209 (23%)
Query: 127 PKYKVAVLASKQE---HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERH--- 180
P+ +VAVL S + L+D + +G + EI VISN + LER
Sbjct: 1154 PRKRVAVLISGKGSNLQALIDAIRDSAQG-VYAEIVLVISNKAG------VLGLERAAKA 1206
Query: 181 GIPYHYLCAKE-NEREEELLELVQN-----TDFLVLARYMQPVPLQKEAYLGYKLLESLS 234
GIP + K+ RE +EL ++ +F+ LA +M+
Sbjct: 1207 GIPSMVISHKDFPSREVYDVELTRHLKTARVEFICLAGFMR------------------- 1247
Query: 235 SKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFV 294
ILS F+R + +INIH LLP F G KQA +AG G T H+V
Sbjct: 1248 -----------ILSVPFVREWRGRLINIHPSLLPKFPGLHVQKQALEAGETESGCTVHYV 1296
Query: 295 TEELDAGPIIEQMVERVSHRDNLRTFVQK 323
E +D G II Q + D+ T Q+
Sbjct: 1297 DEGVDTGAIIVQAAVPILPGDDEETLTQR 1325
>sp|B9DPM5|FMT_STACT Methionyl-tRNA formyltransferase OS=Staphylococcus carnosus (strain
TM300) GN=fmt PE=3 SV=1
Length = 310
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 42/85 (49%)
Query: 239 LTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEEL 298
+T+ F IL L + IN+H LLP ++GG P QA G K G T ++ +L
Sbjct: 83 VTAAFGQILPKSLLDAPKLGAINVHASLLPKYRGGAPIHQAIIDGEKETGVTIMYMAPKL 142
Query: 299 DAGPIIEQMVERVSHRDNLRTFVQK 323
DAG II Q + DN+ + K
Sbjct: 143 DAGDIISQQAIEIEANDNVESMHDK 167
>sp|Q92AI5|FMT_LISIN Methionyl-tRNA formyltransferase OS=Listeria innocua serovar 6a
(strain CLIP 11262) GN=fmt PE=3 SV=1
Length = 312
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 63/148 (42%), Gaps = 15/148 (10%)
Query: 212 RYMQPVPLQKEA-------YLGYKL--------LESLSSKGSLTSYFNMILSGKFLRSYG 256
R + P P++K A Y KL L SL + +T+ + IL L S
Sbjct: 41 RILTPPPVKKAALELGIPVYQPEKLRTSSELEELISLEADLLVTAAYGQILPNTLLESPK 100
Query: 257 KDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDN 316
IN+H LLP ++GG P A G G T ++ E+LDAG +I Q ++ DN
Sbjct: 101 HGAINVHASLLPEYRGGAPVHYALLDGKTETGVTIMYMVEKLDAGDMISQRKIPITEEDN 160
Query: 317 LRTFVQKSEDVEKQCLAKAIKSYCELRV 344
T K + + L + + ++
Sbjct: 161 TGTMFDKLSKLGAELLMDTLPDFLAGKI 188
>sp|Q2YXK0|FMT_STAAB Methionyl-tRNA formyltransferase OS=Staphylococcus aureus (strain
bovine RF122 / ET3-1) GN=fmt PE=3 SV=1
Length = 311
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 65/150 (43%), Gaps = 21/150 (14%)
Query: 212 RYMQPVPLQKEAYLGYKLL----ESLSSKGSL------------TSYFNMILSGKFLRSY 255
R M P P++K A + Y L E LS L T+ F +L L
Sbjct: 41 RVMTPPPVKKVA-MKYDLPVYQPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALP 99
Query: 256 GKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRD 315
IN+H LLP ++GG P QA G + G T ++ ++LDAG II Q ++ D
Sbjct: 100 KLGAINVHASLLPKYRGGAPIHQAIIDGEQETGITIMYMVKKLDAGNIISQQAIKIEEND 159
Query: 316 NLRTFVQK----SEDVEKQCLAKAIKSYCE 341
N+ T K D+ K+ L I+ E
Sbjct: 160 NVGTMHDKLSVLGADLLKETLPSIIEGTNE 189
>sp|Q5WFK7|FMT_BACSK Methionyl-tRNA formyltransferase OS=Bacillus clausii (strain
KSM-K16) GN=fmt PE=3 SV=1
Length = 312
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%)
Query: 239 LTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEEL 298
+T+ + I+ L + IN+H LLP ++GG P QA G K G + ++ E+L
Sbjct: 80 VTAAYGQIVPKAVLDAPPYGCINVHASLLPKYRGGAPIHQAIIDGEKQTGISIMYMAEKL 139
Query: 299 DAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAI 336
DAG ++ Q ++ D+++T K V L K I
Sbjct: 140 DAGAVLSQQAVAITDEDDVQTMHDKLSAVGADLLEKTI 177
>sp|B1HQE4|FMT_LYSSC Methionyl-tRNA formyltransferase OS=Lysinibacillus sphaericus
(strain C3-41) GN=fmt PE=3 SV=1
Length = 313
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 53/110 (48%), Gaps = 15/110 (13%)
Query: 212 RYMQPVPLQKEAY-LGYKLLESLSSKGS--------------LTSYFNMILSGKFLRSYG 256
R + P P++ A LG +++ +GS +T+ F IL + L +
Sbjct: 42 RILTPPPVKAAALELGLPIIQPEKLRGSEELQQILSLQPDIVITAAFGQILPKELLDAPS 101
Query: 257 KDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQ 306
IN+H LLP ++GG P QA G K G T ++ E+LDAG II Q
Sbjct: 102 LGCINVHASLLPKYRGGAPIHQAIIDGEKETGVTIMYMAEKLDAGDIISQ 151
>sp|Q8NX18|FMT_STAAW Methionyl-tRNA formyltransferase OS=Staphylococcus aureus (strain
MW2) GN=fmt PE=3 SV=1
Length = 311
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 65/150 (43%), Gaps = 21/150 (14%)
Query: 212 RYMQPVPLQKEAYLGYKLL----ESLSSKGSL------------TSYFNMILSGKFLRSY 255
R M P P++K A + Y L E LS L T+ F +L L
Sbjct: 41 RVMTPPPVKKVA-MKYDLPVYQPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALP 99
Query: 256 GKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRD 315
IN+H LLP ++GG P QA G + G T ++ ++LDAG II Q ++ D
Sbjct: 100 KLGAINVHASLLPKYRGGAPIHQAIIDGEQETGITIMYMVKKLDAGNIISQQAIKIEEND 159
Query: 316 NLRTFVQK----SEDVEKQCLAKAIKSYCE 341
N+ T K D+ K+ L I+ E
Sbjct: 160 NVGTMHDKLSVLGADLLKETLPSIIEGTNE 189
>sp|Q6G9Z7|FMT_STAAS Methionyl-tRNA formyltransferase OS=Staphylococcus aureus (strain
MSSA476) GN=fmt PE=3 SV=1
Length = 311
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 65/150 (43%), Gaps = 21/150 (14%)
Query: 212 RYMQPVPLQKEAYLGYKLL----ESLSSKGSL------------TSYFNMILSGKFLRSY 255
R M P P++K A + Y L E LS L T+ F +L L
Sbjct: 41 RVMTPPPVKKVA-MKYDLPVYQPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALP 99
Query: 256 GKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRD 315
IN+H LLP ++GG P QA G + G T ++ ++LDAG II Q ++ D
Sbjct: 100 KLGAINVHASLLPKYRGGAPIHQAIIDGEQETGITIMYMVKKLDAGNIISQQAIKIEEND 159
Query: 316 NLRTFVQK----SEDVEKQCLAKAIKSYCE 341
N+ T K D+ K+ L I+ E
Sbjct: 160 NVGTMHDKLSVLGADLLKETLPSIIEGTNE 189
>sp|Q6GHL9|FMT_STAAR Methionyl-tRNA formyltransferase OS=Staphylococcus aureus (strain
MRSA252) GN=fmt PE=3 SV=1
Length = 311
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 65/150 (43%), Gaps = 21/150 (14%)
Query: 212 RYMQPVPLQKEAYLGYKLL----ESLSSKGSL------------TSYFNMILSGKFLRSY 255
R M P P++K A + Y L E LS L T+ F +L L
Sbjct: 41 RVMTPPPVKKVA-MKYDLPVYQPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALP 99
Query: 256 GKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRD 315
IN+H LLP ++GG P QA G + G T ++ ++LDAG II Q ++ D
Sbjct: 100 KLGAINVHASLLPKYRGGAPIHQAIIDGEQETGITIMYMVKKLDAGNIISQQAIKIEEND 159
Query: 316 NLRTFVQK----SEDVEKQCLAKAIKSYCE 341
N+ T K D+ K+ L I+ E
Sbjct: 160 NVGTMHDKLSVLGADLLKETLPSIIEGTNE 189
>sp|P99127|FMT_STAAN Methionyl-tRNA formyltransferase OS=Staphylococcus aureus (strain
N315) GN=fmt PE=1 SV=1
Length = 311
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 65/150 (43%), Gaps = 21/150 (14%)
Query: 212 RYMQPVPLQKEAYLGYKLL----ESLSSKGSL------------TSYFNMILSGKFLRSY 255
R M P P++K A + Y L E LS L T+ F +L L
Sbjct: 41 RVMTPPPVKKVA-MKYDLPVYQPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALP 99
Query: 256 GKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRD 315
IN+H LLP ++GG P QA G + G T ++ ++LDAG II Q ++ D
Sbjct: 100 KLGAINVHASLLPKYRGGAPIHQAIIDGEQETGITIMYMVKKLDAGNIISQQAIKIEEND 159
Query: 316 NLRTFVQK----SEDVEKQCLAKAIKSYCE 341
N+ T K D+ K+ L I+ E
Sbjct: 160 NVGTMHDKLSVLGADLLKETLPSIIEGTNE 189
>sp|P64136|FMT_STAAM Methionyl-tRNA formyltransferase OS=Staphylococcus aureus (strain
Mu50 / ATCC 700699) GN=fmt PE=1 SV=1
Length = 311
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 65/150 (43%), Gaps = 21/150 (14%)
Query: 212 RYMQPVPLQKEAYLGYKLL----ESLSSKGSL------------TSYFNMILSGKFLRSY 255
R M P P++K A + Y L E LS L T+ F +L L
Sbjct: 41 RVMTPPPVKKVA-MKYDLPVYQPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALP 99
Query: 256 GKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRD 315
IN+H LLP ++GG P QA G + G T ++ ++LDAG II Q ++ D
Sbjct: 100 KLGAINVHASLLPKYRGGAPIHQAIIDGEQETGITIMYMVKKLDAGNIISQQAIKIEEND 159
Query: 316 NLRTFVQK----SEDVEKQCLAKAIKSYCE 341
N+ T K D+ K+ L I+ E
Sbjct: 160 NVGTMHDKLSVLGADLLKETLPSIIEGTNE 189
>sp|A5ISA1|FMT_STAA9 Methionyl-tRNA formyltransferase OS=Staphylococcus aureus (strain
JH9) GN=fmt PE=3 SV=1
Length = 311
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 65/150 (43%), Gaps = 21/150 (14%)
Query: 212 RYMQPVPLQKEAYLGYKLL----ESLSSKGSL------------TSYFNMILSGKFLRSY 255
R M P P++K A + Y L E LS L T+ F +L L
Sbjct: 41 RVMTPPPVKKVA-MKYDLPVYQPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALP 99
Query: 256 GKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRD 315
IN+H LLP ++GG P QA G + G T ++ ++LDAG II Q ++ D
Sbjct: 100 KLGAINVHASLLPKYRGGAPIHQAIIDGEQETGITIMYMVKKLDAGNIISQQAIKIEEND 159
Query: 316 NLRTFVQK----SEDVEKQCLAKAIKSYCE 341
N+ T K D+ K+ L I+ E
Sbjct: 160 NVGTMHDKLSVLGADLLKETLPSIIEGTNE 189
>sp|A6U135|FMT_STAA2 Methionyl-tRNA formyltransferase OS=Staphylococcus aureus (strain
JH1) GN=fmt PE=3 SV=1
Length = 311
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 65/150 (43%), Gaps = 21/150 (14%)
Query: 212 RYMQPVPLQKEAYLGYKLL----ESLSSKGSL------------TSYFNMILSGKFLRSY 255
R M P P++K A + Y L E LS L T+ F +L L
Sbjct: 41 RVMTPPPVKKVA-MKYDLPVYQPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALP 99
Query: 256 GKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRD 315
IN+H LLP ++GG P QA G + G T ++ ++LDAG II Q ++ D
Sbjct: 100 KLGAINVHASLLPKYRGGAPIHQAIIDGEQETGITIMYMVKKLDAGNIISQQAIKIEEND 159
Query: 316 NLRTFVQK----SEDVEKQCLAKAIKSYCE 341
N+ T K D+ K+ L I+ E
Sbjct: 160 NVGTMHDKLSVLGADLLKETLPSIIEGTNE 189
>sp|A7X1H4|FMT_STAA1 Methionyl-tRNA formyltransferase OS=Staphylococcus aureus (strain
Mu3 / ATCC 700698) GN=fmt PE=3 SV=1
Length = 311
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 65/150 (43%), Gaps = 21/150 (14%)
Query: 212 RYMQPVPLQKEAYLGYKLL----ESLSSKGSL------------TSYFNMILSGKFLRSY 255
R M P P++K A + Y L E LS L T+ F +L L
Sbjct: 41 RVMTPPPVKKVA-MKYDLPVYQPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALP 99
Query: 256 GKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRD 315
IN+H LLP ++GG P QA G + G T ++ ++LDAG II Q ++ D
Sbjct: 100 KLGAINVHASLLPKYRGGAPIHQAIIDGEQETGITIMYMVKKLDAGNIISQQAIKIEEND 159
Query: 316 NLRTFVQK----SEDVEKQCLAKAIKSYCE 341
N+ T K D+ K+ L I+ E
Sbjct: 160 NVGTMHDKLSVLGADLLKETLPSIIEGTNE 189
>sp|Q6GI12|PUR3_STAAR Phosphoribosylglycinamide formyltransferase OS=Staphylococcus
aureus (strain MRSA252) GN=purN PE=3 SV=1
Length = 188
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 82/184 (44%), Gaps = 40/184 (21%)
Query: 130 KVAVLASKQEHCLVDFLYGWQEGKLP-VEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188
K+A+ AS + + + GKL +E+T + ++H N+ I ++H IP +
Sbjct: 3 KIAIFASGSGSNFENIVEHVESGKLENIEVTALYTDHQ---NAFCIDRAKKHDIPVYINE 59
Query: 189 AKE----NEREEELLELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSY 242
K+ E+ L+ L+ ++++LA YM+ +G LL S K
Sbjct: 60 PKQFGSKAAYEQHLVTLLNEDKVEWIILAGYMR--------LIGPDLLASFEGK------ 105
Query: 243 FNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGP 302
++NIH LLP +KG QA+ +G + G+T H+V +D G
Sbjct: 106 ----------------ILNIHPSLLPKYKGIDAIGQAYHSGDTITGSTVHYVDSGMDTGE 149
Query: 303 IIEQ 306
IIEQ
Sbjct: 150 IIEQ 153
>sp|B9DV45|FMT_STRU0 Methionyl-tRNA formyltransferase OS=Streptococcus uberis (strain
ATCC BAA-854 / 0140J) GN=fmt PE=3 SV=1
Length = 311
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 61/134 (45%), Gaps = 4/134 (2%)
Query: 220 QKEAYLGYKLLES---LSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPA 276
Q E G + LES L + G +T+ F L K L S +N+H LLP ++GG P
Sbjct: 63 QPEKLSGSQELESIMSLDADGIVTAAFGQFLPTKLLDSV-TFAVNVHASLLPKYRGGAPI 121
Query: 277 KQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAI 336
A G + G T + +E+DAG +I + + DN+ T K + + L K +
Sbjct: 122 HYALINGEEEAGVTIMEMVKEMDAGDMIAKASTPILEDDNVGTMFDKLAILGRDLLIKTL 181
Query: 337 KSYCELRVLPYEMN 350
Y ++ P N
Sbjct: 182 PDYLSGQLKPVAQN 195
>sp|P52422|PUR3_ARATH Phosphoribosylglycinamide formyltransferase, chloroplastic
OS=Arabidopsis thaliana GN=PUR3 PE=2 SV=2
Length = 292
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 93/229 (40%), Gaps = 45/229 (19%)
Query: 128 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYL 187
+ K+AV S G +G + ++ +++N + R +GIP
Sbjct: 77 RKKLAVFVSGGGSNFRKIHEGCSDGSVNGDVVLLVTNKKDCGGAEYAR---SNGIPVLVF 133
Query: 188 CAKENEREE-----ELLELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLT 240
+ E + EL+++++ DF++LA Y++ +P++
Sbjct: 134 PKAKREPSDGLSPSELVDVLRKYGVDFVLLAGYLKLIPVE-------------------- 173
Query: 241 SYFNMILSGKFLRSYGKDVINIHHGLLPSFKGG-----KPAKQAFDAGVKLIGATSHFVT 295
++++ K ++NIH LLP+F G K K ++G + G T HFV
Sbjct: 174 ----------LVQAFPKRILNIHPALLPAFGGKGLYGIKVHKAVLESGARYSGPTIHFVN 223
Query: 296 EELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRV 344
EE D G I+ Q RV D ++ E + + + + CE R+
Sbjct: 224 EEYDTGRILAQSAVRVIANDTPEELAKRVLHEEHKLYVEVVGAICEERI 272
>sp|P52423|PUR3_VIGUN Phosphoribosylglycinamide formyltransferase, chloroplastic OS=Vigna
unguiculata GN=PUR3 PE=2 SV=2
Length = 312
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 91/229 (39%), Gaps = 44/229 (19%)
Query: 128 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPY-HY 186
+ K+AV S ++G L ++T +++N + R +GIP +
Sbjct: 98 RKKLAVFVSGGGSNFRSIHEASKKGSLHGDVTVLVTNKSECGGAQYAR---NNGIPVILF 154
Query: 187 LCAKENEREEELLELVQN-----TDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTS 241
AK+ + +LV DF++LA Y++ +P++
Sbjct: 155 PKAKDEPKGLSPCDLVDTLRKFEVDFVLLAGYLKLIPVE--------------------- 193
Query: 242 YFNMILSGKFLRSYGKDVINIHHGLLPSFKGG-----KPAKQAFDAGVKLIGATSHFVTE 296
+R++ + + NIH LLP+F G K K +G + G T HFV E
Sbjct: 194 ---------LIRAFERSIFNIHPSLLPAFGGKGYYGMKVHKAVIASGARFSGPTIHFVDE 244
Query: 297 ELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVL 345
D G I+ Q V V D + + E Q + +++ CE R++
Sbjct: 245 HYDTGRILAQRVVPVLANDTAEELAARVLNEEHQLYVEVVEALCEERIV 293
>sp|Q71YJ3|FMT_LISMF Methionyl-tRNA formyltransferase OS=Listeria monocytogenes serotype
4b (strain F2365) GN=fmt PE=3 SV=1
Length = 312
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 48/106 (45%)
Query: 239 LTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEEL 298
+T+ + IL L S IN+H LLP ++GG P A G G T ++ E+L
Sbjct: 83 VTAAYGQILPNSLLESPKHGAINVHASLLPEYRGGAPVHYALLDGKTETGVTIMYMVEKL 142
Query: 299 DAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRV 344
DAG +I Q ++ DN T K + + L + + ++
Sbjct: 143 DAGDMISQRKIPITDEDNTGTMFDKLSKLGAELLMDTLPDFLAGKI 188
>sp|C1KWC2|FMT_LISMC Methionyl-tRNA formyltransferase OS=Listeria monocytogenes serotype
4b (strain CLIP80459) GN=fmt PE=3 SV=1
Length = 312
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 48/106 (45%)
Query: 239 LTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEEL 298
+T+ + IL L S IN+H LLP ++GG P A G G T ++ E+L
Sbjct: 83 VTAAYGQILPNSLLESPKHGAINVHASLLPEYRGGAPVHYALLDGKTETGVTIMYMVEKL 142
Query: 299 DAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRV 344
DAG +I Q ++ DN T K + + L + + ++
Sbjct: 143 DAGDMISQRKIPITDEDNTGTMFDKLSKLGAELLMDTLPDFLAGKI 188
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.137 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 131,627,993
Number of Sequences: 539616
Number of extensions: 5637933
Number of successful extensions: 15006
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 728
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 14237
Number of HSP's gapped (non-prelim): 779
length of query: 355
length of database: 191,569,459
effective HSP length: 118
effective length of query: 237
effective length of database: 127,894,771
effective search space: 30311060727
effective search space used: 30311060727
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)