Query 018502
Match_columns 355
No_of_seqs 345 out of 2355
Neff 5.3
Searched_HMMs 29240
Date Mon Mar 25 16:15:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018502.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018502hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lou_A Formyltetrahydrofolate 100.0 3.2E-75 1.1E-79 561.6 35.6 282 35-355 3-291 (292)
2 3n0v_A Formyltetrahydrofolate 100.0 1.5E-74 5.2E-79 555.4 37.2 276 40-355 6-286 (286)
3 3o1l_A Formyltetrahydrofolate 100.0 1.2E-74 4E-79 559.9 35.8 277 40-355 20-301 (302)
4 3nrb_A Formyltetrahydrofolate 100.0 2.5E-74 8.4E-79 554.2 31.6 276 40-355 5-285 (287)
5 3obi_A Formyltetrahydrofolate 100.0 4.8E-74 1.7E-78 552.4 32.5 277 41-355 5-286 (288)
6 3kcq_A Phosphoribosylglycinami 100.0 2.5E-48 8.5E-53 359.8 26.3 195 126-354 6-202 (215)
7 3tqr_A Phosphoribosylglycinami 100.0 1.1E-47 3.9E-52 355.4 26.6 194 126-354 3-202 (215)
8 4ds3_A Phosphoribosylglycinami 100.0 1.2E-47 4.1E-52 353.9 25.0 191 128-352 7-206 (209)
9 3da8_A Probable 5'-phosphoribo 100.0 2.6E-47 8.9E-52 353.0 26.9 194 124-353 8-207 (215)
10 1meo_A Phosophoribosylglycinam 100.0 5.7E-47 2E-51 349.0 26.4 193 129-354 1-199 (209)
11 1jkx_A GART;, phosphoribosylgl 100.0 5.7E-47 2E-51 349.6 26.0 193 129-355 1-199 (212)
12 3p9x_A Phosphoribosylglycinami 100.0 4.8E-47 1.6E-51 350.4 23.9 188 128-348 2-195 (211)
13 3auf_A Glycinamide ribonucleot 100.0 1.1E-46 3.9E-51 351.5 26.4 200 122-355 16-221 (229)
14 2ywr_A Phosphoribosylglycinami 100.0 8.6E-46 2.9E-50 342.1 26.2 193 129-355 2-200 (216)
15 3av3_A Phosphoribosylglycinami 100.0 6E-46 2E-50 342.5 24.9 193 128-354 3-207 (212)
16 1fmt_A Methionyl-tRNA FMet for 100.0 4.8E-40 1.7E-44 319.2 23.8 185 127-350 2-197 (314)
17 2bln_A Protein YFBG; transfera 100.0 6.9E-40 2.4E-44 316.8 21.1 183 129-350 1-191 (305)
18 3q0i_A Methionyl-tRNA formyltr 100.0 5.1E-39 1.7E-43 312.6 21.5 185 127-350 6-201 (318)
19 3tqq_A Methionyl-tRNA formyltr 100.0 3E-38 1E-42 306.7 24.0 184 128-350 2-196 (314)
20 3rfo_A Methionyl-tRNA formyltr 100.0 2.4E-38 8.1E-43 307.9 23.2 186 126-350 2-198 (317)
21 1z7e_A Protein aRNA; rossmann 100.0 8.9E-38 3.1E-42 325.6 22.0 183 129-350 1-191 (660)
22 2bw0_A 10-FTHFDH, 10-formyltet 100.0 1.3E-37 4.6E-42 303.8 20.2 188 128-350 22-216 (329)
23 1zgh_A Methionyl-tRNA formyltr 99.9 2E-28 6.9E-33 232.3 10.2 108 204-349 77-185 (260)
24 3p96_A Phosphoserine phosphata 99.8 1.8E-18 6.1E-23 170.6 14.2 120 40-164 10-138 (415)
25 2nyi_A Unknown protein; protei 99.6 2.9E-15 9.8E-20 135.2 7.6 83 37-124 88-174 (195)
26 1u8s_A Glycine cleavage system 99.5 2.9E-14 9.9E-19 127.5 12.3 75 41-122 5-79 (192)
27 1zpv_A ACT domain protein; str 99.5 4.4E-14 1.5E-18 111.2 10.2 74 40-116 3-76 (91)
28 2nyi_A Unknown protein; protei 99.5 2.2E-14 7.7E-19 129.4 9.5 78 39-123 2-83 (195)
29 1u8s_A Glycine cleavage system 99.4 5.9E-13 2E-17 119.0 11.4 83 37-123 88-176 (192)
30 2ko1_A CTR148A, GTP pyrophosph 98.2 3.8E-06 1.3E-10 64.5 8.4 68 41-114 4-71 (88)
31 3p96_A Phosphoserine phosphata 97.5 0.00064 2.2E-08 66.5 12.2 90 40-134 99-190 (415)
32 2f1f_A Acetolactate synthase i 97.3 0.00029 9.9E-09 62.3 6.2 67 41-109 2-68 (164)
33 2f06_A Conserved hypothetical 97.2 0.0056 1.9E-07 51.4 12.4 63 38-108 2-64 (144)
34 2re1_A Aspartokinase, alpha an 97.1 0.0011 3.8E-08 57.7 7.7 103 41-152 24-130 (167)
35 1y7p_A Hypothetical protein AF 97.1 0.00087 3E-08 62.0 6.9 89 41-137 3-96 (223)
36 2fgc_A Acetolactate synthase, 97.1 0.0013 4.4E-08 59.7 7.9 73 36-110 23-95 (193)
37 2pc6_A Probable acetolactate s 97.0 0.00089 3E-08 59.3 6.3 68 40-109 2-69 (165)
38 2dt9_A Aspartokinase; protein- 96.8 0.011 3.7E-07 51.3 10.9 103 41-152 15-122 (167)
39 1ygy_A PGDH, D-3-phosphoglycer 96.4 0.006 2.1E-07 62.5 8.2 75 27-109 443-517 (529)
40 4go7_X Aspartokinase; transfer 96.0 0.04 1.4E-06 49.9 10.3 107 39-152 32-142 (200)
41 2jhe_A Transcription regulator 95.8 0.039 1.3E-06 46.4 8.9 34 44-77 2-35 (190)
42 1sc6_A PGDH, D-3-phosphoglycer 95.7 0.035 1.2E-06 55.1 9.5 76 11-93 303-380 (404)
43 2f06_A Conserved hypothetical 95.6 0.03 1E-06 46.9 7.4 57 44-108 74-130 (144)
44 3s1t_A Aspartokinase; ACT doma 95.2 0.2 6.7E-06 44.2 11.5 104 41-152 15-123 (181)
45 2dtj_A Aspartokinase; protein- 94.2 0.31 1.1E-05 42.6 10.2 105 41-155 14-125 (178)
46 2re1_A Aspartokinase, alpha an 93.1 0.23 7.8E-06 42.9 7.3 62 41-115 102-166 (167)
47 2i6u_A Otcase, ornithine carba 92.7 0.86 2.9E-05 43.8 11.4 119 128-272 148-270 (307)
48 4gmf_A Yersiniabactin biosynth 92.3 0.07 2.4E-06 52.3 3.2 56 123-185 2-57 (372)
49 3k5p_A D-3-phosphoglycerate de 92.1 0.24 8.3E-06 49.5 6.9 75 11-93 314-390 (416)
50 2dtj_A Aspartokinase; protein- 91.8 0.3 1E-05 42.7 6.4 63 40-115 93-158 (178)
51 3mtj_A Homoserine dehydrogenas 90.6 0.61 2.1E-05 46.9 8.1 71 38-111 355-425 (444)
52 3ab4_A Aspartokinase; aspartat 90.6 1.5 5.1E-05 43.3 10.8 105 43-155 265-374 (421)
53 2dt9_A Aspartokinase; protein- 90.1 0.75 2.6E-05 39.5 7.3 62 41-115 94-158 (167)
54 1pvv_A Otcase, ornithine carba 90.1 0.91 3.1E-05 43.8 8.5 59 199-272 218-276 (315)
55 1vlv_A Otcase, ornithine carba 90.0 0.92 3.1E-05 43.9 8.5 75 176-273 216-291 (325)
56 3gd5_A Otcase, ornithine carba 89.3 1.3 4.5E-05 42.9 8.9 118 128-272 157-278 (323)
57 4ep1_A Otcase, ornithine carba 88.8 1.1 3.9E-05 43.6 8.2 72 177-272 228-299 (340)
58 3tpf_A Otcase, ornithine carba 88.1 1.4 4.8E-05 42.3 8.3 59 199-272 209-267 (307)
59 3grf_A Ornithine carbamoyltran 87.3 1.6 5.5E-05 42.3 8.1 120 128-272 161-288 (328)
60 3l76_A Aspartokinase; alloster 86.1 0.63 2.2E-05 48.4 4.9 94 39-138 441-537 (600)
61 3s1t_A Aspartokinase; ACT doma 85.9 1.4 5E-05 38.6 6.4 62 41-115 95-159 (181)
62 1zhv_A Hypothetical protein AT 84.3 1.4 4.8E-05 37.4 5.4 34 43-76 63-99 (134)
63 4go7_X Aspartokinase; transfer 84.1 1.8 6.2E-05 39.0 6.3 63 41-116 114-179 (200)
64 3rjz_A N-type ATP pyrophosphat 83.7 3.3 0.00011 38.2 8.1 79 128-210 4-96 (237)
65 1duv_G Octase-1, ornithine tra 83.6 2.1 7.3E-05 41.5 7.0 73 175-270 203-277 (333)
66 1dxh_A Ornithine carbamoyltran 83.6 1.9 6.7E-05 41.8 6.7 57 199-270 219-277 (335)
67 1zq6_A Otcase, ornithine carba 82.0 4.2 0.00014 39.9 8.5 61 199-272 260-320 (359)
68 4f2g_A Otcase 1, ornithine car 81.7 2.4 8.3E-05 40.7 6.5 121 136-272 130-269 (309)
69 2w37_A Ornithine carbamoyltran 81.0 3 0.0001 40.9 7.0 56 199-270 240-298 (359)
70 4a8t_A Putrescine carbamoyltra 80.2 2.9 9.8E-05 40.7 6.5 27 244-272 271-297 (339)
71 4ekn_B Aspartate carbamoyltran 80.0 3.9 0.00013 39.2 7.3 109 128-266 151-264 (306)
72 4amu_A Ornithine carbamoyltran 79.9 3.1 0.00011 40.9 6.7 26 244-271 279-304 (365)
73 2ef0_A Ornithine carbamoyltran 78.2 4.8 0.00016 38.5 7.3 121 136-272 130-266 (301)
74 1ml4_A Aspartate transcarbamoy 77.4 9.2 0.00031 36.6 9.1 114 128-266 155-269 (308)
75 3c1m_A Probable aspartokinase; 77.3 6 0.0002 39.7 8.1 63 40-113 316-381 (473)
76 2qmw_A PDT, prephenate dehydra 76.9 8.2 0.00028 36.2 8.4 67 41-111 185-255 (267)
77 4a8p_A Putrescine carbamoyltra 76.7 3.6 0.00012 40.3 6.1 27 244-272 249-275 (355)
78 1zvp_A Hypothetical protein VC 75.9 4.3 0.00015 34.3 5.6 34 43-76 72-108 (133)
79 2qmx_A Prephenate dehydratase; 75.8 7.2 0.00025 36.9 7.7 64 43-111 203-267 (283)
80 3mwb_A Prephenate dehydratase; 75.6 9.5 0.00032 36.6 8.6 69 41-112 200-270 (313)
81 3tvi_A Aspartokinase; structur 74.1 6.3 0.00022 39.5 7.2 82 43-138 299-384 (446)
82 3luy_A Probable chorismate mut 73.9 16 0.00055 35.2 9.8 67 43-111 208-275 (329)
83 3mah_A Aspartokinase; aspartat 73.7 4.1 0.00014 34.4 5.0 92 40-150 16-113 (157)
84 1oth_A Protein (ornithine tran 73.5 13 0.00045 35.7 9.0 116 128-270 155-274 (321)
85 1wy5_A TILS, hypothetical UPF0 73.4 8.1 0.00028 36.3 7.4 79 100-188 5-91 (317)
86 3sds_A Ornithine carbamoyltran 72.7 15 0.00052 35.8 9.3 118 127-271 187-312 (353)
87 3csu_A Protein (aspartate carb 72.0 13 0.00044 35.6 8.5 112 129-266 155-268 (310)
88 1ni5_A Putative cell cycle pro 70.2 8.4 0.00029 38.1 7.1 61 128-188 13-80 (433)
89 4fb5_A Probable oxidoreductase 69.6 7.1 0.00024 36.5 6.1 73 127-213 24-103 (393)
90 4had_A Probable oxidoreductase 69.6 7.3 0.00025 36.4 6.2 69 126-212 21-94 (350)
91 3c1m_A Probable aspartokinase; 69.5 10 0.00036 37.9 7.6 64 41-115 403-469 (473)
92 3ab4_A Aspartokinase; aspartat 69.2 9.4 0.00032 37.5 7.1 62 41-115 343-407 (421)
93 3l76_A Aspartokinase; alloster 68.6 8.6 0.0003 39.9 7.0 114 43-165 271-403 (600)
94 3ip3_A Oxidoreductase, putativ 68.4 13 0.00044 34.8 7.6 74 128-212 2-75 (337)
95 3tvi_A Aspartokinase; structur 67.8 10 0.00036 37.9 7.2 62 41-113 373-437 (446)
96 2fhm_A Probable acylphosphatas 65.9 15 0.00053 28.5 6.4 58 102-163 17-74 (91)
97 1js1_X Transcarbamylase; alpha 65.1 40 0.0014 32.4 10.4 114 138-272 145-280 (324)
98 3a06_A 1-deoxy-D-xylulose 5-ph 64.9 9.8 0.00034 37.6 6.1 76 129-211 4-92 (376)
99 3q2i_A Dehydrogenase; rossmann 64.6 8.1 0.00028 36.4 5.4 70 126-212 11-83 (354)
100 3kzn_A Aotcase, N-acetylornith 62.6 26 0.00088 34.0 8.7 60 199-272 260-320 (359)
101 1rwu_A Hypothetical UPF0250 pr 61.7 40 0.0014 27.4 8.3 63 41-111 35-101 (109)
102 3ec7_A Putative dehydrogenase; 59.6 28 0.00096 32.8 8.2 71 127-212 22-95 (357)
103 3ohs_X Trans-1,2-dihydrobenzen 59.2 11 0.00038 35.1 5.3 70 128-212 2-74 (334)
104 3mz0_A Inositol 2-dehydrogenas 58.8 26 0.00088 32.7 7.8 71 128-212 2-74 (344)
105 4gqa_A NAD binding oxidoreduct 58.6 12 0.00041 35.9 5.5 74 126-212 24-104 (412)
106 3u3x_A Oxidoreductase; structu 58.3 23 0.00079 33.5 7.4 70 127-212 25-96 (361)
107 1ulr_A Putative acylphosphatas 57.3 31 0.001 26.6 6.7 59 101-163 16-74 (88)
108 3mah_A Aspartokinase; aspartat 57.2 13 0.00046 31.2 5.0 62 41-115 87-151 (157)
109 1zh8_A Oxidoreductase; TM0312, 56.5 16 0.00055 34.2 5.9 71 125-212 15-90 (340)
110 1phz_A Protein (phenylalanine 55.5 25 0.00084 35.3 7.2 65 43-112 37-101 (429)
111 3e9m_A Oxidoreductase, GFO/IDH 54.9 20 0.00069 33.3 6.3 69 127-212 4-75 (330)
112 4h3v_A Oxidoreductase domain p 54.0 13 0.00045 34.6 4.8 72 128-212 6-83 (390)
113 3fwz_A Inner membrane protein 53.8 27 0.00093 28.1 6.2 72 125-211 4-78 (140)
114 2cdq_A Aspartokinase; aspartat 53.6 18 0.00062 36.8 6.0 64 41-115 419-484 (510)
115 3evn_A Oxidoreductase, GFO/IDH 53.3 19 0.00066 33.4 5.8 50 127-184 4-54 (329)
116 3moi_A Probable dehydrogenase; 53.0 15 0.00053 35.0 5.2 67 128-212 2-72 (387)
117 3tnj_A Universal stress protei 52.7 35 0.0012 26.9 6.7 42 173-215 76-120 (150)
118 3trg_A Acylphosphatase; fatty 51.8 29 0.00097 27.5 5.8 59 101-163 26-84 (98)
119 1w2i_A Acylphosphatase; hydrol 51.5 31 0.001 26.8 5.8 59 101-163 18-76 (91)
120 2cdq_A Aspartokinase; aspartat 51.5 28 0.00096 35.4 7.1 35 42-76 341-378 (510)
121 3a2k_A TRNA(Ile)-lysidine synt 51.0 11 0.00036 37.6 3.8 61 127-188 17-85 (464)
122 2nvw_A Galactose/lactose metab 50.9 34 0.0011 34.1 7.5 53 127-183 38-92 (479)
123 2p2s_A Putative oxidoreductase 50.5 36 0.0012 31.5 7.2 47 128-181 4-50 (336)
124 3btv_A Galactose/lactose metab 50.2 28 0.00096 34.0 6.7 50 127-183 19-73 (438)
125 3rsc_A CALG2; TDP, enediyne, s 50.0 86 0.0029 29.1 9.8 56 124-188 16-74 (415)
126 3dty_A Oxidoreductase, GFO/IDH 49.0 28 0.00096 33.3 6.3 73 127-213 11-94 (398)
127 3uuw_A Putative oxidoreductase 48.9 22 0.00074 32.6 5.4 68 128-212 6-74 (308)
128 1nvm_B Acetaldehyde dehydrogen 48.3 34 0.0012 32.3 6.7 74 127-212 3-79 (312)
129 1urr_A CG18505 protein; acylph 47.5 47 0.0016 26.3 6.5 60 101-164 25-85 (102)
130 3loq_A Universal stress protei 47.4 65 0.0022 28.7 8.3 118 126-265 168-291 (294)
131 1vmb_A 30S ribosomal protein S 47.0 58 0.002 27.5 7.3 70 35-107 12-98 (140)
132 2bjd_A Acylphosphatase; hypert 46.7 39 0.0013 26.8 5.8 59 100-162 27-85 (101)
133 3cea_A MYO-inositol 2-dehydrog 46.6 66 0.0022 29.6 8.4 52 126-184 6-58 (346)
134 1r0k_A 1-deoxy-D-xylulose 5-ph 46.4 44 0.0015 32.9 7.3 55 128-188 4-60 (388)
135 3tsa_A SPNG, NDP-rhamnosyltran 46.4 83 0.0028 28.9 9.0 51 128-187 1-54 (391)
136 3rc1_A Sugar 3-ketoreductase; 45.6 35 0.0012 32.0 6.4 70 127-212 26-97 (350)
137 4h31_A Otcase, ornithine carba 45.3 35 0.0012 33.2 6.4 60 199-272 245-305 (358)
138 3otg_A CALG1; calicheamicin, T 45.0 72 0.0025 29.4 8.4 55 125-188 17-74 (412)
139 1pg5_A Aspartate carbamoyltran 44.8 64 0.0022 30.5 8.0 50 200-266 209-261 (299)
140 3db2_A Putative NADPH-dependen 44.6 30 0.001 32.4 5.7 51 127-184 4-54 (354)
141 3d6n_B Aspartate carbamoyltran 44.3 25 0.00087 33.3 5.1 115 139-272 125-256 (291)
142 3s2u_A UDP-N-acetylglucosamine 44.2 70 0.0024 30.0 8.2 54 128-188 2-58 (365)
143 2der_A TRNA-specific 2-thiouri 43.7 33 0.0011 33.3 6.0 57 127-188 16-85 (380)
144 3euw_A MYO-inositol dehydrogen 42.5 42 0.0014 31.2 6.3 68 127-212 3-73 (344)
145 3k32_A Uncharacterized protein 42.0 40 0.0014 29.4 5.8 56 128-188 6-64 (203)
146 1ydw_A AX110P-like protein; st 41.9 56 0.0019 30.5 7.2 50 127-183 5-54 (362)
147 2vh7_A Acylphosphatase-1; hydr 41.0 55 0.0019 25.7 5.9 58 101-162 22-80 (99)
148 3nkl_A UDP-D-quinovosamine 4-d 40.7 1.3E+02 0.0045 23.6 9.1 59 127-188 3-72 (141)
149 3v5n_A Oxidoreductase; structu 40.4 31 0.0011 33.3 5.2 75 127-212 36-118 (417)
150 3ezy_A Dehydrogenase; structur 40.4 74 0.0025 29.5 7.7 69 128-212 2-72 (344)
151 2gv1_A Probable acylphosphatas 39.7 65 0.0022 24.9 6.1 57 102-162 19-76 (92)
152 4fzr_A SSFS6; structural genom 39.7 1.7E+02 0.0059 26.9 10.1 54 126-188 13-69 (398)
153 3mt0_A Uncharacterized protein 39.3 64 0.0022 28.7 6.8 66 173-264 204-276 (290)
154 2hma_A Probable tRNA (5-methyl 39.3 36 0.0012 33.0 5.4 57 127-188 8-77 (376)
155 4hkt_A Inositol 2-dehydrogenas 39.1 66 0.0022 29.6 7.0 66 128-212 3-71 (331)
156 2w6k_A COBE; biosynthetic prot 39.0 68 0.0023 27.1 6.5 64 125-188 7-75 (145)
157 3ic5_A Putative saccharopine d 38.9 89 0.003 23.2 6.7 73 127-212 4-77 (118)
158 4huj_A Uncharacterized protein 38.8 28 0.00097 30.4 4.3 67 128-213 23-90 (220)
159 3v7e_A Ribosome-associated pro 38.5 20 0.00069 27.2 2.8 42 144-189 18-61 (82)
160 1k92_A Argininosuccinate synth 38.1 56 0.0019 32.8 6.7 58 126-188 8-71 (455)
161 3e18_A Oxidoreductase; dehydro 37.8 34 0.0012 32.3 4.9 67 127-212 4-73 (359)
162 3keo_A Redox-sensing transcrip 36.6 1.4E+02 0.0049 26.7 8.6 119 62-211 24-155 (212)
163 3abi_A Putative uncharacterize 36.6 42 0.0015 31.7 5.4 71 126-212 14-85 (365)
164 3bl5_A Queuosine biosynthesis 36.0 69 0.0024 27.3 6.3 55 129-188 4-63 (219)
165 3brv_A Inhibitor of nuclear fa 35.8 13 0.00044 26.3 1.1 30 3-32 18-47 (48)
166 3qhp_A Type 1 capsular polysac 35.3 1.6E+02 0.0055 23.1 8.1 79 129-212 3-82 (166)
167 2iya_A OLEI, oleandomycin glyc 35.2 2.2E+02 0.0076 26.4 10.2 53 127-188 11-66 (424)
168 3hbm_A UDP-sugar hydrolase; PS 35.2 61 0.0021 30.0 6.1 73 129-215 1-80 (282)
169 3olq_A Universal stress protei 34.9 98 0.0034 27.7 7.4 70 173-265 233-306 (319)
170 1h6d_A Precursor form of gluco 33.6 60 0.002 31.6 6.0 51 126-183 81-132 (433)
171 2lxf_A Uncharacterized protein 33.5 56 0.0019 27.0 4.9 59 102-164 49-107 (121)
172 3oti_A CALG3; calicheamicin, T 33.1 1.3E+02 0.0044 27.8 8.1 52 127-188 19-73 (398)
173 1tlt_A Putative oxidoreductase 32.1 1.4E+02 0.0047 27.2 8.0 50 127-183 4-54 (319)
174 3q98_A Transcarbamylase; rossm 31.9 1.7E+02 0.006 28.7 9.1 129 128-270 191-337 (399)
175 2e18_A NH(3)-dependent NAD(+) 31.9 1.2E+02 0.0041 27.1 7.4 58 128-188 22-82 (257)
176 3beo_A UDP-N-acetylglucosamine 31.8 2.8E+02 0.0096 24.8 10.4 82 127-212 7-103 (375)
177 2j5a_A 30S ribosomal protein S 31.7 1.3E+02 0.0046 23.9 6.9 60 44-106 12-86 (110)
178 3ia7_A CALG4; glycosysltransfe 31.7 1.9E+02 0.0064 26.3 8.9 52 128-188 4-58 (402)
179 2ho3_A Oxidoreductase, GFO/IDH 31.6 1E+02 0.0035 28.2 7.0 70 128-212 1-70 (325)
180 4etn_A LMPTP, low molecular we 30.9 1.1E+02 0.0037 26.7 6.7 82 127-214 33-120 (184)
181 3r7f_A Aspartate carbamoyltran 30.2 54 0.0018 31.2 4.9 115 139-272 126-255 (304)
182 3r8n_F 30S ribosomal protein S 29.7 51 0.0018 25.9 3.9 55 50-107 16-79 (100)
183 1cqm_A Ribosomal protein S6; a 29.6 2E+02 0.0068 22.4 7.7 41 52-93 19-68 (101)
184 2lbw_A H/ACA ribonucleoprotein 29.5 56 0.0019 26.5 4.3 18 172-189 54-71 (121)
185 2ioj_A Hypothetical protein AF 29.2 43 0.0015 27.3 3.5 32 157-188 74-105 (139)
186 3llv_A Exopolyphosphatase-rela 29.1 89 0.003 24.6 5.4 69 128-211 6-77 (141)
187 3oj0_A Glutr, glutamyl-tRNA re 28.9 74 0.0025 25.4 4.9 68 128-212 21-88 (144)
188 1p8a_A Protein tyrosine phosph 28.8 1.2E+02 0.0042 24.9 6.4 84 127-215 3-90 (146)
189 3luc_A Protein argonaute-2; MI 28.7 1.6E+02 0.0055 24.0 7.1 81 99-188 30-111 (138)
190 1rlg_A 50S ribosomal protein L 28.5 91 0.0031 25.0 5.4 52 145-203 35-87 (119)
191 3p52_A NH(3)-dependent NAD(+) 28.4 1.3E+02 0.0044 27.3 7.0 57 128-188 26-87 (249)
192 2cwd_A Low molecular weight ph 27.9 2.1E+02 0.0073 23.9 7.9 82 127-214 3-93 (161)
193 3l4b_C TRKA K+ channel protien 27.5 45 0.0015 28.7 3.6 70 129-211 1-72 (218)
194 1f0k_A MURG, UDP-N-acetylgluco 27.2 1.5E+02 0.0052 26.6 7.3 77 129-212 7-104 (364)
195 4dio_A NAD(P) transhydrogenase 27.2 1.5E+02 0.0051 29.2 7.6 102 127-265 189-312 (405)
196 3dlo_A Universal stress protei 27.1 1.7E+02 0.0059 23.5 7.0 88 128-215 24-128 (155)
197 2g1u_A Hypothetical protein TM 27.1 44 0.0015 27.2 3.3 76 123-212 14-92 (155)
198 2ale_A SNU13, NHP2/L7AE family 27.0 77 0.0026 26.4 4.8 43 145-189 40-83 (134)
199 3bbn_F Ribosomal protein S6; s 26.5 2.6E+02 0.0088 24.4 8.2 64 41-107 63-150 (168)
200 3oqb_A Oxidoreductase; structu 26.1 68 0.0023 30.2 4.8 73 126-212 4-91 (383)
201 1sur_A PAPS reductase; assimil 26.1 61 0.0021 28.1 4.2 55 129-188 45-104 (215)
202 1xbi_A 50S ribosomal protein L 25.8 78 0.0027 25.6 4.5 59 134-203 30-89 (120)
203 2h9z_A Hypothetical protein HP 25.5 78 0.0027 24.3 4.2 63 42-112 15-79 (86)
204 3o74_A Fructose transport syst 25.4 2.6E+02 0.0089 23.7 8.2 73 99-189 17-90 (272)
205 3c85_A Putative glutathione-re 25.4 68 0.0023 26.6 4.2 70 128-211 39-112 (183)
206 2y1e_A 1-deoxy-D-xylulose 5-ph 25.1 98 0.0033 30.7 5.8 80 126-211 19-112 (398)
207 2fc3_A 50S ribosomal protein L 25.0 99 0.0034 25.0 5.0 52 145-203 36-88 (124)
208 3h4t_A Glycosyltransferase GTF 25.0 3.4E+02 0.012 25.2 9.6 51 129-188 1-54 (404)
209 3qk7_A Transcriptional regulat 25.0 2.2E+02 0.0075 25.0 7.8 72 99-189 25-96 (294)
210 1vq8_F 50S ribosomal protein L 24.7 93 0.0032 25.0 4.8 19 171-189 62-80 (120)
211 2ywb_A GMP synthase [glutamine 24.6 1.5E+02 0.0051 29.6 7.2 56 129-189 210-270 (503)
212 3o9z_A Lipopolysaccaride biosy 24.4 1.4E+02 0.0049 27.4 6.7 35 127-166 2-38 (312)
213 3t38_A Arsenate reductase; low 24.3 2.8E+02 0.0095 24.8 8.3 81 126-213 79-162 (213)
214 1tdj_A Biosynthetic threonine 24.2 56 0.0019 33.2 4.0 63 41-109 337-399 (514)
215 2j0w_A Lysine-sensitive aspart 24.0 20 0.0007 35.7 0.7 36 41-76 307-345 (449)
216 3l9w_A Glutathione-regulated p 23.9 1.1E+02 0.0036 29.9 5.8 50 128-188 4-54 (413)
217 3bio_A Oxidoreductase, GFO/IDH 23.6 81 0.0028 29.1 4.7 35 127-165 8-43 (304)
218 1mio_B Nitrogenase molybdenum 23.3 2.7E+02 0.0092 27.3 8.7 77 128-211 312-392 (458)
219 3jvi_A Protein tyrosine phosph 23.1 1.9E+02 0.0065 24.3 6.7 83 127-215 3-94 (161)
220 3r5t_A Ferric vibriobactin ABC 23.0 2.5E+02 0.0084 25.3 7.9 76 126-214 21-96 (305)
221 3nbm_A PTS system, lactose-spe 22.9 81 0.0028 25.2 4.0 63 126-188 4-85 (108)
222 3o85_A Ribosomal protein L7AE; 22.9 94 0.0032 25.3 4.5 50 134-189 32-82 (122)
223 2xzm_U Ribosomal protein L7AE 22.9 98 0.0033 25.5 4.6 19 171-189 57-75 (126)
224 1zzg_A Glucose-6-phosphate iso 22.8 68 0.0023 31.8 4.2 58 128-189 116-182 (415)
225 3d4o_A Dipicolinate synthase s 22.5 3.6E+02 0.012 24.3 9.0 104 128-283 155-259 (293)
226 4gpa_A Glutamate receptor 4; P 22.5 4.2E+02 0.014 23.7 11.9 94 44-163 70-165 (389)
227 3pdi_A Nitrogenase MOFE cofact 22.2 2E+02 0.0068 28.6 7.6 163 42-214 203-411 (483)
228 3m2t_A Probable dehydrogenase; 22.1 68 0.0023 30.2 3.9 48 127-182 4-53 (359)
229 2pjk_A 178AA long hypothetical 22.0 1.1E+02 0.0037 26.4 4.9 75 125-215 12-92 (178)
230 2yfk_A Aspartate/ornithine car 22.0 3.2E+02 0.011 27.1 8.9 86 176-272 243-337 (418)
231 1xng_A NH(3)-dependent NAD(+) 21.8 2.1E+02 0.0071 25.7 7.1 57 128-188 25-86 (268)
232 1vbk_A Hypothetical protein PH 21.8 1E+02 0.0035 28.8 5.1 78 128-214 179-265 (307)
233 4g65_A TRK system potassium up 21.7 76 0.0026 31.4 4.3 71 127-211 2-75 (461)
234 3aek_B Light-independent proto 21.7 3.2E+02 0.011 27.4 9.1 158 42-211 153-356 (525)
235 2iyf_A OLED, oleandomycin glyc 21.7 2.8E+02 0.0095 25.7 8.2 52 128-188 7-61 (430)
236 3j21_Z 50S ribosomal protein L 21.6 71 0.0024 24.8 3.3 17 171-187 47-63 (99)
237 3a8t_A Adenylate isopentenyltr 21.3 1.6E+02 0.0055 28.3 6.4 94 42-148 40-149 (339)
238 2vxo_A GMP synthase [glutamine 21.3 2.8E+02 0.0096 29.1 8.8 57 129-188 241-302 (697)
239 3i1m_F 30S ribosomal protein S 21.3 1E+02 0.0035 25.8 4.5 44 50-94 16-68 (135)
240 2pg3_A Queuosine biosynthesis 21.2 1.2E+02 0.0041 26.4 5.2 55 129-188 3-63 (232)
241 8abp_A L-arabinose-binding pro 21.1 2.7E+02 0.0093 24.1 7.6 72 99-188 17-89 (306)
242 2glx_A 1,5-anhydro-D-fructose 21.0 1.5E+02 0.0051 27.0 6.0 47 129-183 1-48 (332)
243 1d1q_A Tyrosine phosphatase (E 20.9 2.5E+02 0.0084 23.5 6.9 82 127-214 6-97 (161)
244 1vl2_A Argininosuccinate synth 20.9 1.3E+02 0.0043 30.0 5.7 61 124-189 10-74 (421)
245 4fgw_A Glycerol-3-phosphate de 20.6 83 0.0029 30.8 4.3 24 125-148 31-55 (391)
246 3by5_A Cobalamin biosynthesis 20.6 1.9E+02 0.0066 24.7 6.2 31 158-188 41-71 (155)
247 3s3t_A Nucleotide-binding prot 20.5 1.9E+02 0.0066 22.2 5.8 40 175-215 76-119 (146)
248 2nz2_A Argininosuccinate synth 20.2 1.6E+02 0.0054 28.9 6.3 56 128-188 5-64 (413)
249 3v7q_A Probable ribosomal prot 20.1 58 0.002 25.5 2.6 19 171-189 51-69 (101)
No 1
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=100.00 E-value=3.2e-75 Score=561.59 Aligned_cols=282 Identities=35% Similarity=0.592 Sum_probs=259.1
Q ss_pred CCCCCcccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeC--CCCCChHHHHHHHHHHHhh
Q 018502 35 SVSPTLTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFD--PIKWPREQMDEDFFKLSKM 112 (355)
Q Consensus 35 ~~~~~~~~~ILTV~GpDr~GIVA~VS~~La~~g~NIld~~q~id~~~g~F~Mr~~v~~~--~~~~~~~~L~~~l~~la~~ 112 (355)
||+..+++++||++|||||||||+||++|+++||||+|++|+.|..+|.||||++|+.+ +...+.++|+++|+++|++
T Consensus 3 ~~~~~~~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~~~~~~~~~L~~~f~~la~~ 82 (292)
T 3lou_A 3 SVPQRPHQFVLTLSCPSAAGQVAAVVGLLDRHRCYVDELTVFDDDLSARFFVRCVFHATDDADALRVDALRREFEPIAER 82 (292)
T ss_dssp -----CCEEEEEEEEESCSCHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEECC----CCHHHHHHHHHHHHHH
T ss_pred CCcCCCCcEEEEEEcCCCCCHHHHHHHHHHHCCCCEEeeEEEecCCCCceEEEEEEEccCcccCCCHHHHHHHHHHHHHh
Confidence 57677788999999999999999999999999999999999988889999999999987 5356899999999999999
Q ss_pred hhhccceeeeCCCCCCceEEEEEeCCchhHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeCCC-C
Q 018502 113 FNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAK-E 191 (355)
Q Consensus 113 lg~~~~~~~~~~~~~~~riavl~S~~g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~-~ 191 (355)
++| +|++.+.++++|||||+||+||||++||++++.|+++++|++|+|||++ +.++|+++|||+++++.+ .
T Consensus 83 ~~m---~~~l~~~~~~~ri~vl~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~-----~~~~A~~~gIp~~~~~~~~~ 154 (292)
T 3lou_A 83 FRM---QWAIHDVAARPKVLIMVSKLEHCLADLLFRWKMGELKMDIVGIVSNHPD-----FAPLAAQHGLPFRHFPITAD 154 (292)
T ss_dssp HTC---EEEEEETTSCCEEEEEECSCCHHHHHHHHHHHHTSSCCEEEEEEESSST-----THHHHHHTTCCEEECCCCSS
T ss_pred cCc---EEEeeccCCCCEEEEEEcCCCcCHHHHHHHHHcCCCCcEEEEEEeCcHH-----HHHHHHHcCCCEEEeCCCcC
Confidence 998 6899988999999999999999999999999999999999999999964 457899999999988743 2
Q ss_pred Ch--hHHHHHHHhc--CCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChHHHhhcCCCeEEecCCCC
Q 018502 192 NE--REEELLELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLL 267 (355)
Q Consensus 192 ~~--~~~~~~~~l~--~~Dlivla~y~~~~~~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~~l~~~~~~~INiHpslL 267 (355)
+. .++++++.++ ++|++|+||||+ |||+++++.|++++||+|||||
T Consensus 155 ~r~~~~~~~~~~l~~~~~Dlivla~y~~------------------------------il~~~~l~~~~~~~iNiHpSlL 204 (292)
T 3lou_A 155 TKAQQEAQWLDVFETSGAELVILARYMQ------------------------------VLSPEASARLANRAINIHHSFL 204 (292)
T ss_dssp CHHHHHHHHHHHHHHHTCSEEEESSCCS------------------------------CCCHHHHHHTTTSEEEEEEECS
T ss_pred CHHHHHHHHHHHHHHhCCCEEEecCchh------------------------------hCCHHHHhhhcCCeEEeCCCcC
Confidence 22 2457888887 899999999999 9999999999999999999999
Q ss_pred CCCCCchHHHHHHHhCCcEeEEEEEEecCcCCCCCeeeeEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeee
Q 018502 268 PSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPY 347 (355)
Q Consensus 268 P~yrG~~p~~~A~~~G~~~~G~T~H~v~~~~D~G~Ii~q~~~~I~~~dt~~~l~~k~~~~~~~~l~~~i~~~~~~~~~~~ 347 (355)
|+|||++|++||+++|++.+|+|+|+|++++|+||||.|+.++|.++||.++|.+|++++|+++++++++++++|++..+
T Consensus 205 P~~rG~~p~~~Ai~~G~~~~G~Tvh~v~~~lD~G~Ii~Q~~v~i~~~dt~~~L~~r~~~~e~~~l~~av~~~~~~~~~~~ 284 (292)
T 3lou_A 205 PGFKGAKPYHQAHARGVKLIGATAHFVTDDLDEGPIIEQVVERVDHSYRPEQLLAVGRDVECITLARAVKAFIERRVFLN 284 (292)
T ss_dssp SCCCSSCHHHHHHHHTCSEEEEEEEECCSSTTCSCEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred cCCCCccHHHHHHHcCCCeEEEEEEEEcCCCcCCCEEEEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCEEEc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCceeeC
Q 018502 348 EMNKTVVF 355 (355)
Q Consensus 348 ~~~~tvvf 355 (355)
+ +|||||
T Consensus 285 ~-~~~~vf 291 (292)
T 3lou_A 285 G-DRTVVF 291 (292)
T ss_dssp T-TEEEEC
T ss_pred C-CEEEEe
Confidence 6 999998
No 2
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=100.00 E-value=1.5e-74 Score=555.38 Aligned_cols=276 Identities=32% Similarity=0.550 Sum_probs=259.7
Q ss_pred cccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHHHHhhhhhccce
Q 018502 40 LTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMRSV 119 (355)
Q Consensus 40 ~~~~ILTV~GpDr~GIVA~VS~~La~~g~NIld~~q~id~~~g~F~Mr~~v~~~~~~~~~~~L~~~l~~la~~lg~~~~~ 119 (355)
+++++||++|||||||||+||++|+++||||+|++|+.|..+|.||||++|+.++ ..+.++|+++|++++++++| +
T Consensus 6 ~~~~vLtv~c~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~-~~~~~~L~~~f~~la~~l~m---~ 81 (286)
T 3n0v_A 6 PDTWILTADCPSMLGTVDVVTRYLFEQRCYVTEHHSFDDRQSGRFFIRVEFRQPD-DFDEAGFRAGLAERSEAFGM---A 81 (286)
T ss_dssp -CCEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEECCS-SCCHHHHHHHHHHHHGGGTC---E
T ss_pred CCcEEEEEEeCCCCCHHHHHHHHHHHCCCCeeeeeeeccCCCCeeEEEEEEecCC-CCCHHHHHHHHHHHHHHcCC---E
Confidence 4679999999999999999999999999999999999888899999999999987 57899999999999999998 6
Q ss_pred eeeCCCCCCceEEEEEeCCchhHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeCCC-CCh--hHH
Q 018502 120 VRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAK-ENE--REE 196 (355)
Q Consensus 120 ~~~~~~~~~~riavl~S~~g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~-~~~--~~~ 196 (355)
|++.+.++++|||||+||+||||++||++++.|+++++|++|+|||++ +.++|+++|||+++++.+ .+. .++
T Consensus 82 ~~l~~~~~~~ri~vl~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~-----~~~~A~~~gIp~~~~~~~~~~r~~~~~ 156 (286)
T 3n0v_A 82 FELTAPNHRPKVVIMVSKADHCLNDLLYRQRIGQLGMDVVAVVSNHPD-----LEPLAHWHKIPYYHFALDPKDKPGQER 156 (286)
T ss_dssp EEEECTTCCCEEEEEESSCCHHHHHHHHHHHTTSSCCEEEEEEESSST-----THHHHHHTTCCEEECCCBTTBHHHHHH
T ss_pred EEeecCCCCcEEEEEEeCCCCCHHHHHHHHHCCCCCcEEEEEEeCcHH-----HHHHHHHcCCCEEEeCCCcCCHHHHHH
Confidence 899999999999999999999999999999999999999999999964 467899999999988742 222 245
Q ss_pred HHHHHhc--CCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChHHHhhcCCCeEEecCCCCCCCCCch
Q 018502 197 ELLELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGK 274 (355)
Q Consensus 197 ~~~~~l~--~~Dlivla~y~~~~~~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~~l~~~~~~~INiHpslLP~yrG~~ 274 (355)
++++.++ ++|++|+||||+ |||+++++.|++++||+||||||+|||++
T Consensus 157 ~~~~~l~~~~~Dlivla~y~~------------------------------il~~~~l~~~~~~~iNiHpSlLP~~rG~~ 206 (286)
T 3n0v_A 157 KVLQVIEETGAELVILARYMQ------------------------------VLSPELCRRLDGWAINIHHSLLPGFKGAK 206 (286)
T ss_dssp HHHHHHHHHTCSEEEESSCCS------------------------------CCCHHHHHHTTTSEEEEEECSSTTCCCSC
T ss_pred HHHHHHHhcCCCEEEeccccc------------------------------ccCHHHHhhhcCCeEEeccccccCCCCcc
Confidence 7888887 899999999999 99999999999999999999999999999
Q ss_pred HHHHHHHhCCcEeEEEEEEecCcCCCCCeeeeEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeeecCCceee
Q 018502 275 PAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPYEMNKTVV 354 (355)
Q Consensus 275 p~~~A~~~G~~~~G~T~H~v~~~~D~G~Ii~q~~~~I~~~dt~~~l~~k~~~~~~~~l~~~i~~~~~~~~~~~~~~~tvv 354 (355)
|++||+++|++.+|+|+|+|++++|+||||.|+.++|.++||.++|.+|++++|+++++++++++++|++..++ |||||
T Consensus 207 p~~~Ai~~G~~~~G~Tvh~v~~~lD~GpIi~Q~~~~i~~~dt~~~L~~r~~~~e~~~l~~av~~~~~~~~~~~~-~~~~v 285 (286)
T 3n0v_A 207 PYHQAYNKGVKMVGATAHYINNDLDEGPIIAQGVEVVDHSHYPEDLIAKGRDIECLTLARAVGYHIERRVFLNA-NRTVV 285 (286)
T ss_dssp HHHHHHHHTCSEEEEEEEECCSSTTCSCEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEET-TEEEE
T ss_pred HHHHHHHcCCCeEEEEEEEEcCCCCCCceeEEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCEEEcC-CEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999996 99999
Q ss_pred C
Q 018502 355 F 355 (355)
Q Consensus 355 f 355 (355)
|
T Consensus 286 f 286 (286)
T 3n0v_A 286 L 286 (286)
T ss_dssp C
T ss_pred C
Confidence 8
No 3
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=100.00 E-value=1.2e-74 Score=559.93 Aligned_cols=277 Identities=45% Similarity=0.677 Sum_probs=260.8
Q ss_pred cccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHHHHhhhhhccce
Q 018502 40 LTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMRSV 119 (355)
Q Consensus 40 ~~~~ILTV~GpDr~GIVA~VS~~La~~g~NIld~~q~id~~~g~F~Mr~~v~~~~~~~~~~~L~~~l~~la~~lg~~~~~ 119 (355)
++++|||++|||||||||+||++|+++||||+|++|++|+.+|.||||++|+.++...+.++|+++|+++|++++| .
T Consensus 20 ~~~~iLtv~c~DrpGIVa~VS~~La~~g~NI~d~~q~~d~~~g~FfMr~~~~~~~~~~~~~~L~~~l~~la~~l~m---~ 96 (302)
T 3o1l_A 20 MRTFRLVIACPDRVGIVAKVSNFLASHNGWITEASHHSDNLSGWFFMRHEIRADTLPFDLDGFREAFTPIAEEFSM---D 96 (302)
T ss_dssp CCEEEEEEEEECCTTHHHHHHHHHHHTTCCEEEEEEEEETTTTEEEEEEEEEGGGSSSCHHHHHHHHHHHHHHHTC---E
T ss_pred cceEEEEEECCCCCCHHHHHHHHHHHCCCCEEEeeEEecCCCCeEEEEEEEecCCCCCCHHHHHHHHHHHHHHhCC---e
Confidence 4789999999999999999999999999999999999998899999999999986557899999999999999998 6
Q ss_pred eeeCCCCCCceEEEEEeCCchhHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeCC-CCCh--hHH
Q 018502 120 VRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCA-KENE--REE 196 (355)
Q Consensus 120 ~~~~~~~~~~riavl~S~~g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~-~~~~--~~~ 196 (355)
|++.+.++++|||||+||.||||++||++++.|+++++|++|+|||++ +.++|+++|||+++++. +.+. .++
T Consensus 97 ~~l~~~~~~~ri~vl~Sg~g~nl~~ll~~~~~g~l~~~I~~Visn~~~-----~~~~A~~~gIp~~~~~~~~~~r~~~~~ 171 (302)
T 3o1l_A 97 WRITDSAQKKRVVLMASRESHCLADLLHRWHSDELDCDIACVISNHQD-----LRSMVEWHDIPYYHVPVDPKDKEPAFA 171 (302)
T ss_dssp EEEEETTSCCEEEEEECSCCHHHHHHHHHHHTTCSCSEEEEEEESSST-----THHHHHTTTCCEEECCCCSSCCHHHHH
T ss_pred eeecccCCCcEEEEEEeCCchhHHHHHHHHHCCCCCcEEEEEEECcHH-----HHHHHHHcCCCEEEcCCCcCCHHHHHH
Confidence 889988899999999999999999999999999999999999999964 56889999999999863 2222 246
Q ss_pred HHHHHhc--CCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChHHHhhcCCCeEEecCCCCCCCCCch
Q 018502 197 ELLELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGK 274 (355)
Q Consensus 197 ~~~~~l~--~~Dlivla~y~~~~~~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~~l~~~~~~~INiHpslLP~yrG~~ 274 (355)
+++++++ ++|++|+||||+ |||+++++.|++++||+||||||+|||++
T Consensus 172 ~~~~~l~~~~~DliVlagym~------------------------------IL~~~~l~~~~~~~INiHpSlLP~frG~~ 221 (302)
T 3o1l_A 172 EVSRLVGHHQADVVVLARYMQ------------------------------ILPPQLCREYAHQVINIHHSFLPSFVGAK 221 (302)
T ss_dssp HHHHHHHHTTCSEEEESSCCS------------------------------CCCTTHHHHTTTCEEEEESSCTTSSCSSC
T ss_pred HHHHHHHHhCCCEEEHhHhhh------------------------------hcCHHHHhhhhCCeEEeCcccccCCCCcc
Confidence 7888887 899999999999 99999999999999999999999999999
Q ss_pred HHHHHHHhCCcEeEEEEEEecCcCCCCCeeeeEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeeecCCceee
Q 018502 275 PAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPYEMNKTVV 354 (355)
Q Consensus 275 p~~~A~~~G~~~~G~T~H~v~~~~D~G~Ii~q~~~~I~~~dt~~~l~~k~~~~~~~~l~~~i~~~~~~~~~~~~~~~tvv 354 (355)
|++||+++|++.+|+|+|+|++++|+||||.|+.++|.++||.++|.+|++++|+++++++++++++|++..++ +||||
T Consensus 222 p~~~Ai~~G~k~tG~TvH~v~~~lD~GpII~Q~~v~I~~~dt~~~L~~r~~~~e~~~l~~av~~~~~~~v~~~~-~~~~v 300 (302)
T 3o1l_A 222 PYHQASLRGVKLIGATCHYVTEELDAGPIIEQDVVRVSHRDSIENMVRFGRDVEKMVLARGLRAHLEDRVLVHD-NKTVV 300 (302)
T ss_dssp HHHHHHHHTCSEEEEEEEECCSSTTCSCEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEET-TEEEE
T ss_pred HHHHHHHcCCCeEEEEEEEECCCCcCCCeEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCEEEcC-CEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999996 99999
Q ss_pred C
Q 018502 355 F 355 (355)
Q Consensus 355 f 355 (355)
|
T Consensus 301 f 301 (302)
T 3o1l_A 301 F 301 (302)
T ss_dssp C
T ss_pred c
Confidence 8
No 4
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=100.00 E-value=2.5e-74 Score=554.18 Aligned_cols=276 Identities=38% Similarity=0.612 Sum_probs=256.7
Q ss_pred cccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHHHHhhhhhccce
Q 018502 40 LTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMRSV 119 (355)
Q Consensus 40 ~~~~ILTV~GpDr~GIVA~VS~~La~~g~NIld~~q~id~~~g~F~Mr~~v~~~~~~~~~~~L~~~l~~la~~lg~~~~~ 119 (355)
.++++||++|||||||||+||++|+++||||+|++|+.+..+|.||||++|+.+.. +.++|+++|++++++++| .
T Consensus 5 ~~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~--~~~~L~~~f~~la~~~~m---~ 79 (287)
T 3nrb_A 5 NNQYVLSLACQDAPGIVSEVSTFLFNNGANIVEAEQFNDEDSSKFFMRVSVEIPVA--GVNDFNSAFGKVVEKYNA---E 79 (287)
T ss_dssp TTEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEECCC-----CHHHHHHHHHHGGGTC---E
T ss_pred CCeEEEEEECCCCCCHHHHHHHHHHHCCCCEEeeeeeecCCCCeEEEEEEEEcCCC--CHHHHHHHHHHHHHHcCC---e
Confidence 56799999999999999999999999999999999998888999999999998753 567999999999999998 6
Q ss_pred eeeCCCCCCceEEEEEeCCchhHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeCCCC-Ch--hHH
Q 018502 120 VRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKE-NE--REE 196 (355)
Q Consensus 120 ~~~~~~~~~~riavl~S~~g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~-~~--~~~ 196 (355)
|++.+.++++|||||+||+||||++|++++++|+++++|++|+|||++ + +.++|+++|||+++++.+. +. .++
T Consensus 80 ~~l~~~~~~~ri~vl~Sg~g~nl~~ll~~~~~g~l~~~i~~Visn~~~---a-~~~~A~~~gIp~~~~~~~~~~r~~~~~ 155 (287)
T 3nrb_A 80 WWFRPRTDRKKVVIMVSKFDHCLGDLLYRHRLGELDMEVVGIISNHPR---E-ALSVSLVGDIPFHYLPVTPATKAAQES 155 (287)
T ss_dssp EEEEETTCCCEEEEEECSCCHHHHHHHHHHHHTSSCCEEEEEEESSCG---G-GCCCCCCTTSCEEECCCCGGGHHHHHH
T ss_pred eEeeccCCCcEEEEEEeCCCcCHHHHHHHHHCCCCCeEEEEEEeCChH---H-HHHHHHHcCCCEEEEeccCcchhhHHH
Confidence 889988899999999999999999999999999999999999999963 1 6778999999999987432 21 245
Q ss_pred HHHHHhc--CCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChHHHhhcCCCeEEecCCCCCCCCCch
Q 018502 197 ELLELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGK 274 (355)
Q Consensus 197 ~~~~~l~--~~Dlivla~y~~~~~~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~~l~~~~~~~INiHpslLP~yrG~~ 274 (355)
+++++++ ++|++|+||||+ |||+++++.|++++||+||||||+|||++
T Consensus 156 ~~~~~l~~~~~Dlivlagym~------------------------------il~~~~l~~~~~~~iNiHpSlLP~~rG~~ 205 (287)
T 3nrb_A 156 QIKNIVTQSQADLIVLARYMQ------------------------------ILSDDLSAFLSGRCINIHHSFLPGFKGAK 205 (287)
T ss_dssp HHHHHHHHHTCSEEEESSCCS------------------------------CCCHHHHHHHTTSEEEEESSCTTTTCSSC
T ss_pred HHHHHHHHhCCCEEEhhhhhh------------------------------hcCHHHHhhccCCeEEECcccccCCCCch
Confidence 7888887 899999999999 99999999999999999999999999999
Q ss_pred HHHHHHHhCCcEeEEEEEEecCcCCCCCeeeeEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeeecCCceee
Q 018502 275 PAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPYEMNKTVV 354 (355)
Q Consensus 275 p~~~A~~~G~~~~G~T~H~v~~~~D~G~Ii~q~~~~I~~~dt~~~l~~k~~~~~~~~l~~~i~~~~~~~~~~~~~~~tvv 354 (355)
|++||+++|++.+|+|+|+|++++|+||||.|+.++|.++||.++|.+|++++|+++++++++++++|++..++ +||||
T Consensus 206 p~~~Ai~~G~k~tG~Tvh~v~~~lD~GpIi~Q~~v~i~~~dt~~~L~~r~~~~e~~~l~~av~~~~~~~~~~~~-~~~~v 284 (287)
T 3nrb_A 206 PYHQAHTRGVKLIGATAHFVTADLDEGPIIAQDVEHVSHRDSAEDLVRKGRDIERRVLSRAVLLFLEDRLIVNG-ERTVV 284 (287)
T ss_dssp HHHHHHHHTCSEEEEEEEECCSSSSCCCEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEET-TEEEE
T ss_pred HHHHHHHcCCCeEEEEEEEECCCCcCCCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCEEEcC-CEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999996 99999
Q ss_pred C
Q 018502 355 F 355 (355)
Q Consensus 355 f 355 (355)
|
T Consensus 285 f 285 (287)
T 3nrb_A 285 F 285 (287)
T ss_dssp C
T ss_pred c
Confidence 8
No 5
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=100.00 E-value=4.8e-74 Score=552.37 Aligned_cols=277 Identities=39% Similarity=0.629 Sum_probs=259.7
Q ss_pred ccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHHHHhhhhhcccee
Q 018502 41 THGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMRSVV 120 (355)
Q Consensus 41 ~~~ILTV~GpDr~GIVA~VS~~La~~g~NIld~~q~id~~~g~F~Mr~~v~~~~~~~~~~~L~~~l~~la~~lg~~~~~~ 120 (355)
.+++||++|||||||||+||++|+++||||+|++|+.+..+|.||||++|+.++...+.++|+++|++++++++| +|
T Consensus 5 ~~~iLtv~g~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~~~~~~~L~~~f~~la~~~~m---~~ 81 (288)
T 3obi_A 5 HQYVLTLSCPDRAGIVSAVSTFLFENGQNILDAQQYNDTESGHFFMRVVFNAAAKVIPLASLRTGFGVIAAKFTM---GW 81 (288)
T ss_dssp CEEEEEEEEECCTTHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEESSCCCCHHHHHHHHHHHHHHTTC---EE
T ss_pred CeEEEEEECCCCCCHHHHHHHHHHHCCCcEEeeeeeecCCCCceEEEEEEEcCCCCCCHHHHHHHHHHHHHHcCC---EE
Confidence 469999999999999999999999999999999999888899999999999987667899999999999999998 68
Q ss_pred eeCCCCCCceEEEEEeCCchhHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeCCCC-Ch--hHHH
Q 018502 121 RVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKE-NE--REEE 197 (355)
Q Consensus 121 ~~~~~~~~~riavl~S~~g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~-~~--~~~~ 197 (355)
++.+.++++|||||+||+||||++||++++.|+++++|++|+|||+. .+.++|+++|||+++++.+. +. .+++
T Consensus 82 ~l~~~~~~~ri~vl~Sg~g~nl~~ll~~~~~g~l~~~i~~Visn~p~----~~~~~A~~~gIp~~~~~~~~~~r~~~~~~ 157 (288)
T 3obi_A 82 HMRDRETRRKVMLLVSQSDHCLADILYRWRVGDLHMIPTAIVSNHPR----ETFSGFDFGDIPFYHFPVNKDTRRQQEAA 157 (288)
T ss_dssp EEEETTSCEEEEEEECSCCHHHHHHHHHHHTTSSCEEEEEEEESSCG----GGSCCTTTTTCCEEECCCCTTTHHHHHHH
T ss_pred EeeccCCCcEEEEEEcCCCCCHHHHHHHHHCCCCCeEEEEEEcCCCh----hHHHHHHHcCCCEEEeCCCcccHHHHHHH
Confidence 99988899999999999999999999999999999999999999931 25678999999999987432 22 2457
Q ss_pred HHHHhc--CCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChHHHhhcCCCeEEecCCCCCCCCCchH
Q 018502 198 LLELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKP 275 (355)
Q Consensus 198 ~~~~l~--~~Dlivla~y~~~~~~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~~l~~~~~~~INiHpslLP~yrG~~p 275 (355)
+++.++ ++|++|+||||+ |||+++++.|++++||+||||||+|||++|
T Consensus 158 ~~~~l~~~~~Dlivlagy~~------------------------------il~~~~l~~~~~~~iNiHpSlLP~~rG~~p 207 (288)
T 3obi_A 158 ITALIAQTHTDLVVLARYMQ------------------------------ILSDEMSARLAGRCINIHHSFLPGFKGAKP 207 (288)
T ss_dssp HHHHHHHHTCCEEEESSCCS------------------------------CCCHHHHHHTTTSEEEEEEECSSCCCSSCH
T ss_pred HHHHHHhcCCCEEEhhhhhh------------------------------hCCHHHHhhhcCCeEEeCcccccCCCCchH
Confidence 888887 899999999999 999999999999999999999999999999
Q ss_pred HHHHHHhCCcEeEEEEEEecCcCCCCCeeeeEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeeecCCceeeC
Q 018502 276 AKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPYEMNKTVVF 355 (355)
Q Consensus 276 ~~~A~~~G~~~~G~T~H~v~~~~D~G~Ii~q~~~~I~~~dt~~~l~~k~~~~~~~~l~~~i~~~~~~~~~~~~~~~tvvf 355 (355)
++||+++|++.+|+|+|+|++++|+||||.|+.++|.++||.++|.+|++++|+++++++++++++|++..++ +|||||
T Consensus 208 ~~~A~~~G~~~~G~Tvh~v~~~~D~GpIi~Q~~v~i~~~dt~~~L~~r~~~~e~~~l~~av~~~~~~~~~~~~-~~~~vf 286 (288)
T 3obi_A 208 YHQAFDRGVKLIGATAHYVTSALDEGPIIDQDVERISHRDTPADLVRKGRDIERRVLSRALHYHLDDRVILNG-RKTVVF 286 (288)
T ss_dssp HHHHHHHTCSEEEEEEEECCSSTTCSCEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEET-TEEEEC
T ss_pred HHHHHHcCCCEEEEEEEEECCCCcCCCeEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCEEEcC-CEEEEc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999996 999998
No 6
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=100.00 E-value=2.5e-48 Score=359.80 Aligned_cols=195 Identities=31% Similarity=0.485 Sum_probs=178.8
Q ss_pred CCCceEEEEEeCCchhHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeCCCCChhHHHHHHHhc--
Q 018502 126 DPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ-- 203 (355)
Q Consensus 126 ~~~~riavl~S~~g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l~-- 203 (355)
++++||+||+||+|+|++++++++++|+++++|++|+||+++ +..+++|+++|||+++++.+. .+++++.+.++
T Consensus 6 ~~~~ri~vl~SG~gsnl~all~~~~~~~~~~~I~~Vis~~~~---a~~l~~A~~~gIp~~~~~~~~-~~~~~~~~~L~~~ 81 (215)
T 3kcq_A 6 KKELRVGVLISGRGSNLEALAKAFSTEESSVVISCVISNNAE---ARGLLIAQSYGIPTFVVKRKP-LDIEHISTVLREH 81 (215)
T ss_dssp -CCEEEEEEESSCCHHHHHHHHHTCCC-CSEEEEEEEESCTT---CTHHHHHHHTTCCEEECCBTT-BCHHHHHHHHHHT
T ss_pred CCCCEEEEEEECCcHHHHHHHHHHHcCCCCcEEEEEEeCCcc---hHHHHHHHHcCCCEEEeCccc-CChHHHHHHHHHh
Confidence 467899999999999999999999999999999999999853 467899999999999876432 23467888886
Q ss_pred CCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChHHHhhcCCCeEEecCCCCCCCCCchHHHHHHHhC
Q 018502 204 NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAG 283 (355)
Q Consensus 204 ~~Dlivla~y~~~~~~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~~l~~~~~~~INiHpslLP~yrG~~p~~~A~~~G 283 (355)
++|++|+++||+ |||+++++.|++++||+||||||+|||++|++||+.+|
T Consensus 82 ~~Dlivlagy~~------------------------------IL~~~~l~~~~~~~iNiHpSLLP~yrG~~pi~~Ai~~G 131 (215)
T 3kcq_A 82 DVDLVCLAGFMS------------------------------ILPEKFVTDWHHKIINIHPSLLPSFKGLNAQEQAYKAG 131 (215)
T ss_dssp TCSEEEESSCCS------------------------------CCCHHHHHHTTTSEEEEESSCTTTTCSSCHHHHHHHHT
T ss_pred CCCEEEEeCCce------------------------------EeCHHHHhhccCCeEEECcccccCCCCccHHHHHHHcC
Confidence 899999999999 99999999999999999999999999999999999999
Q ss_pred CcEeEEEEEEecCcCCCCCeeeeEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeeecCCceee
Q 018502 284 VKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPYEMNKTVV 354 (355)
Q Consensus 284 ~~~~G~T~H~v~~~~D~G~Ii~q~~~~I~~~dt~~~l~~k~~~~~~~~l~~~i~~~~~~~~~~~~~~~tvv 354 (355)
++.+|+|+|+|++++|+||||.|+.++|.++||.++|.+|+.++|++++.++++.+++|++.+.+++||++
T Consensus 132 ~~~tGvTvh~v~~~lD~G~Ii~Q~~v~I~~~dt~~~L~~rl~~~e~~ll~~~l~~~~~g~~~~~~~~~~~~ 202 (215)
T 3kcq_A 132 VKIAGCTLHYVYQELDAGPIIMQAAVPVLREDTAESLASRILAAEHVCYPKGVKLIAQDKIKLCDDGTVQC 202 (215)
T ss_dssp CSEEEEEEEECCSSTTCSCEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECTTSCEEE
T ss_pred CCeEEEEEEEEcCCCCCCCEEEEEEeecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEccCCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999933588875
No 7
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=100.00 E-value=1.1e-47 Score=355.36 Aligned_cols=194 Identities=28% Similarity=0.442 Sum_probs=177.0
Q ss_pred CCCceEEEEEeCCchhHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeCCCC-Chh---HHHHHHH
Q 018502 126 DPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKE-NER---EEELLEL 201 (355)
Q Consensus 126 ~~~~riavl~S~~g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~-~~~---~~~~~~~ 201 (355)
++++|||||+||+||||++|++++++| ++++|++|+||++ ++..+++|+++|||++.++.+. ..+ ++++.+.
T Consensus 3 ~~~~riavl~SG~Gsnl~all~~~~~~-~~~eI~~Vis~~~---~a~~~~~A~~~gIp~~~~~~~~~~~r~~~d~~~~~~ 78 (215)
T 3tqr_A 3 REPLPIVVLISGNGTNLQAIIGAIQKG-LAIEIRAVISNRA---DAYGLKRAQQADIPTHIIPHEEFPSRTDFESTLQKT 78 (215)
T ss_dssp -CCEEEEEEESSCCHHHHHHHHHHHTT-CSEEEEEEEESCT---TCHHHHHHHHTTCCEEECCGGGSSSHHHHHHHHHHH
T ss_pred CCCcEEEEEEeCCcHHHHHHHHHHHcC-CCCEEEEEEeCCc---chHHHHHHHHcCCCEEEeCccccCchhHhHHHHHHH
Confidence 357899999999999999999999999 9999999999985 3567899999999999876321 122 4678888
Q ss_pred hc--CCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChHHHhhcCCCeEEecCCCCCCCCCchHHHHH
Q 018502 202 VQ--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQA 279 (355)
Q Consensus 202 l~--~~Dlivla~y~~~~~~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~~l~~~~~~~INiHpslLP~yrG~~p~~~A 279 (355)
++ ++|++|+++||+ |||+++++.|++++||+|||+||+|||++|++||
T Consensus 79 l~~~~~Dliv~agy~~------------------------------il~~~~l~~~~~~~iNiHpSLLP~yrG~~pi~~A 128 (215)
T 3tqr_A 79 IDHYDPKLIVLAGFMR------------------------------KLGKAFVSHYSGRMINIHPSLLPKYTGLNTHERA 128 (215)
T ss_dssp HHTTCCSEEEESSCCS------------------------------CCCHHHHHHTTTSEEEEESSSTTTTCSSCHHHHH
T ss_pred HHhcCCCEEEEccchh------------------------------hCCHHHHhhccCCeEEeCcccCCCCCChhHHHHH
Confidence 87 799999999999 9999999999999999999999999999999999
Q ss_pred HHhCCcEeEEEEEEecCcCCCCCeeeeEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeeecCCceee
Q 018502 280 FDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPYEMNKTVV 354 (355)
Q Consensus 280 ~~~G~~~~G~T~H~v~~~~D~G~Ii~q~~~~I~~~dt~~~l~~k~~~~~~~~l~~~i~~~~~~~~~~~~~~~tvv 354 (355)
+.+|++.+|+|+|+|++++|+||||.|+.++|.++||.++|.+|+.++|++++.++++.+.+|++.+.+ +|+.+
T Consensus 129 i~~G~~~tGvTvh~v~~~~D~G~Ii~Q~~v~I~~~dt~~~L~~rl~~~~~~ll~~~l~~~~~g~~~~~~-~~~~~ 202 (215)
T 3tqr_A 129 LAAGETEHGVSVHYVTEDLDAGPLICQARLSITPQDTPETLKTRVHALEHIIYPEVLSWFAAGRLNYHN-NQVFL 202 (215)
T ss_dssp HHTTCSEEEEEEEECC-CTTCSCEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEET-TEEEE
T ss_pred HHcCCCeEEEEEEEEcCCCCCCCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEecC-CEEEE
Confidence 999999999999999999999999999999999999999999999999999999999999999999975 77653
No 8
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=100.00 E-value=1.2e-47 Score=353.86 Aligned_cols=191 Identities=28% Similarity=0.458 Sum_probs=169.4
Q ss_pred CceEEEEEeCCchhHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeCCCC-Chh---HHHHHHHhc
Q 018502 128 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKE-NER---EEELLELVQ 203 (355)
Q Consensus 128 ~~riavl~S~~g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~-~~~---~~~~~~~l~ 203 (355)
|+||+||+||+|+||+++++++++|.++++|++|+||+++ ...+++|+++|||+++++.+. ..+ ++++.+.++
T Consensus 7 ~~ri~vl~SG~gsnl~all~~~~~~~l~~~I~~Visn~~~---a~~l~~A~~~gIp~~~~~~~~~~~r~~~d~~~~~~l~ 83 (209)
T 4ds3_A 7 RNRVVIFISGGGSNMEALIRAAQAPGFPAEIVAVFSDKAE---AGGLAKAEAAGIATQVFKRKDFASKEAHEDAILAALD 83 (209)
T ss_dssp CEEEEEEESSCCHHHHHHHHHHTSTTCSEEEEEEEESCTT---CTHHHHHHHTTCCEEECCGGGSSSHHHHHHHHHHHHH
T ss_pred CccEEEEEECCcHHHHHHHHHHHcCCCCcEEEEEEECCcc---cHHHHHHHHcCCCEEEeCccccCCHHHHHHHHHHHHH
Confidence 6799999999999999999999999999999999999853 467899999999999877432 222 467888887
Q ss_pred --CCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChHHHhhcCCCeEEecCCCCCCCCCchHHHHHHH
Q 018502 204 --NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFD 281 (355)
Q Consensus 204 --~~Dlivla~y~~~~~~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~~l~~~~~~~INiHpslLP~yrG~~p~~~A~~ 281 (355)
++|++|+++||+ |||+++++.|++++||+||||||+|||++|++||+.
T Consensus 84 ~~~~Dliv~agy~~------------------------------il~~~~l~~~~~~~iNiHpSLLP~yrG~~pi~~Ai~ 133 (209)
T 4ds3_A 84 VLKPDIICLAGYMR------------------------------LLSGRFIAPYEGRILNIHPSLLPLFPGLHTHQRALD 133 (209)
T ss_dssp HHCCSEEEESSCCS------------------------------CCCHHHHGGGTTCEEEEESSCTTSSCSSCHHHHHHH
T ss_pred hcCCCEEEEecccc------------------------------CcCHHHHhhccCCeEEECCccccCCCChhHHHHHHH
Confidence 899999999999 999999999999999999999999999999999999
Q ss_pred hCCcEeEEEEEEecCcCCCCCeeeeEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCe---eeecCCce
Q 018502 282 AGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRV---LPYEMNKT 352 (355)
Q Consensus 282 ~G~~~~G~T~H~v~~~~D~G~Ii~q~~~~I~~~dt~~~l~~k~~~~~~~~l~~~i~~~~~~~~---~~~~~~~t 352 (355)
+|++.+|+|+|+|++++|+||||.|+.++|.++||.++|.+|+.++|++++.++++.+.+|++ ..++ +||
T Consensus 134 ~G~~~tGvTvh~v~~~~D~G~Ii~Q~~v~I~~~dt~~~L~~r~~~~~~~ll~~~l~~~~~g~~~~~~~~~-~~~ 206 (209)
T 4ds3_A 134 AGMKLAGCTVHLVTEGMDEGPILAQAAVPVLDGDTAETLAARVLKAEHRLYPLALQKFAAGEKASNQFSD-GMV 206 (209)
T ss_dssp TTCSEEEEEEEECCC--CCCCEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHCC-----------CC
T ss_pred cCCCeEEEEEEEEcCCCCCCCeEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeeeeC-CEe
Confidence 999999999999999999999999999999999999999999999999999999999999999 7775 776
No 9
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=100.00 E-value=2.6e-47 Score=352.98 Aligned_cols=194 Identities=24% Similarity=0.344 Sum_probs=176.5
Q ss_pred CCCCCceEEEEEeCCchhHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeCCCC-Chh---HHHHH
Q 018502 124 DIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKE-NER---EEELL 199 (355)
Q Consensus 124 ~~~~~~riavl~S~~g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~-~~~---~~~~~ 199 (355)
..+.++||+||+||+|+||++|+++++. +++++|++|+||++ ++++++|+++|||++..+.+. ..+ ++++.
T Consensus 8 ~~~~~~ri~vl~SG~gsnl~all~~~~~-~~~~eI~~Vis~~~----a~~~~~A~~~gIp~~~~~~~~~~~r~~~d~~~~ 82 (215)
T 3da8_A 8 PPSAPARLVVLASGTGSLLRSLLDAAVG-DYPARVVAVGVDRE----CRAAEIAAEASVPVFTVRLADHPSRDAWDVAIT 82 (215)
T ss_dssp CCCSSEEEEEEESSCCHHHHHHHHHSST-TCSEEEEEEEESSC----CHHHHHHHHTTCCEEECCGGGSSSHHHHHHHHH
T ss_pred CCCCCcEEEEEEeCChHHHHHHHHHHhc-cCCCeEEEEEeCCc----hHHHHHHHHcCCCEEEeCcccccchhhhhHHHH
Confidence 3467889999999999999999999865 67899999999985 478999999999999875321 112 46788
Q ss_pred HHhc--CCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChHHHhhcCCCeEEecCCCCCCCCCchHHH
Q 018502 200 ELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAK 277 (355)
Q Consensus 200 ~~l~--~~Dlivla~y~~~~~~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~~l~~~~~~~INiHpslLP~yrG~~p~~ 277 (355)
+.++ ++|++|+++||+ |||+++++.|++++||+||||||+|||++|++
T Consensus 83 ~~l~~~~~Dlivlagy~~------------------------------iL~~~~l~~~~~~~iNiHpSLLP~yrG~~pi~ 132 (215)
T 3da8_A 83 AATAAHEPDLVVSAGFMR------------------------------ILGPQFLSRFYGRTLNTHPALLPAFPGTHGVA 132 (215)
T ss_dssp HHHHTTCCSEEEEEECCS------------------------------CCCHHHHHHHTTTEEEEESSCTTSSCSTTHHH
T ss_pred HHHHhhCCCEEEEcCchh------------------------------hCCHHHHhhccCCeEEeCcccccCCCCchHHH
Confidence 8886 899999999999 99999999999999999999999999999999
Q ss_pred HHHHhCCcEeEEEEEEecCcCCCCCeeeeEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeeecCCcee
Q 018502 278 QAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPYEMNKTV 353 (355)
Q Consensus 278 ~A~~~G~~~~G~T~H~v~~~~D~G~Ii~q~~~~I~~~dt~~~l~~k~~~~~~~~l~~~i~~~~~~~~~~~~~~~tv 353 (355)
||+++|++.+|+|+|+|++++|+||||.|+.++|.++||.++|.+|+.++|++++.++++.+.+|++.+++ +|++
T Consensus 133 ~Ai~~G~~~tGvTvh~v~~~lD~G~Ii~Q~~v~I~~~dt~~~L~~rl~~~~~~ll~~~l~~~~~g~~~~~~-~~~~ 207 (215)
T 3da8_A 133 DALAYGVKVTGATVHLVDAGTDTGPILAQQPVPVLDGDDEETLHERIKVTERRLLVAAVAALATHGVTVVG-RTAT 207 (215)
T ss_dssp HHHHHTCSEEEEEEEECCSSSSCSCEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEET-TEEE
T ss_pred HHHHcCCCeEEEEEEEEcCCCCCCCEEEEEEeecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEeC-CEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999864 5543
No 10
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=100.00 E-value=5.7e-47 Score=349.02 Aligned_cols=193 Identities=32% Similarity=0.447 Sum_probs=175.6
Q ss_pred ceEEEEEeCCchhHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeCCC-CChh---HHHHHHHhc-
Q 018502 129 YKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAK-ENER---EEELLELVQ- 203 (355)
Q Consensus 129 ~riavl~S~~g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~-~~~~---~~~~~~~l~- 203 (355)
+|||||+||+|+||++|++++++|+++++|++|+|++++ ..++++|+++|||+++++.+ ...+ ++++.+.++
T Consensus 1 ~riaVl~SG~Gs~L~aLi~~~~~~~~~~~I~~Vvs~~~~---~~~~~~A~~~gIp~~~~~~~~~~~r~~~~~~~~~~l~~ 77 (209)
T 1meo_A 1 ARVAVLISGTGSNLQALIDSTREPNSSAQIDIVISNKAA---VAGLDKAERAGIPTRVINHKLYKNRVEFDSAIDLVLEE 77 (209)
T ss_dssp CEEEEEESSSCTTHHHHHHHHHSTTCSCEEEEEEESSTT---CHHHHHHHHTTCCEEECCGGGSSSHHHHHHHHHHHHHH
T ss_pred CeEEEEEECCchHHHHHHHHHhcCCCCcEEEEEEeCCCC---hHHHHHHHHcCCCEEEECccccCchhhhhHHHHHHHHh
Confidence 489999999999999999999999999999999999864 46789999999999877632 2222 356777776
Q ss_pred -CCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChHHHhhcCCCeEEecCCCCCCCCCchHHHHHHHh
Q 018502 204 -NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDA 282 (355)
Q Consensus 204 -~~Dlivla~y~~~~~~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~~l~~~~~~~INiHpslLP~yrG~~p~~~A~~~ 282 (355)
++|++|+++||+ |||+++++.+++++||+||||||+|||++|++||+.+
T Consensus 78 ~~~Dliv~a~y~~------------------------------il~~~~l~~~~~~~iNiHpSLLP~yrG~~pi~~Ai~~ 127 (209)
T 1meo_A 78 FSIDIVCLAGFMR------------------------------ILSGPFVQKWNGKMLNIHPSLLPSFKGSNAHEQALET 127 (209)
T ss_dssp TTCCEEEEESCCS------------------------------CCCHHHHHHTTTSEEEEESSSTTSSCSSCHHHHHHHH
T ss_pred cCCCEEEEcchhh------------------------------hCCHHHHhhhcCCEEEEccCcCcCCCCccHHHHHHHc
Confidence 899999999999 9999999999999999999999999999999999999
Q ss_pred CCcEeEEEEEEecCcCCCCCeeeeEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeeecCCceee
Q 018502 283 GVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPYEMNKTVV 354 (355)
Q Consensus 283 G~~~~G~T~H~v~~~~D~G~Ii~q~~~~I~~~dt~~~l~~k~~~~~~~~l~~~i~~~~~~~~~~~~~~~tvv 354 (355)
|++.+|+|+|+|++++|+||||.|+.++|.++||.++|.+|+.+++++++.++++.+.+|++.+.++|||+.
T Consensus 128 G~~~tGvTvh~v~~~~D~G~Ii~Q~~v~I~~~dt~~~L~~rl~~~~~~ll~~~l~~~~~g~~~~~~~~~~~~ 199 (209)
T 1meo_A 128 GVTVTGCTVHFVAEDVDAGQIILQEAVPVKRGDTVATLSERVKLAEHKIFPAALQLVASGTVQLGENGKICW 199 (209)
T ss_dssp TCSEEEEEEEECCC---CCCEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHTSEEECTTSSEEE
T ss_pred CCCcEEEEEEEECCCCcCCCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCceEcCCCeEEE
Confidence 999999999999999999999999999999999999999999999999999999999999999998889863
No 11
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=100.00 E-value=5.7e-47 Score=349.59 Aligned_cols=193 Identities=28% Similarity=0.409 Sum_probs=178.8
Q ss_pred ceEEEEEeCCchhHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeCCC-CChh---HHHHHHHhc-
Q 018502 129 YKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAK-ENER---EEELLELVQ- 203 (355)
Q Consensus 129 ~riavl~S~~g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~-~~~~---~~~~~~~l~- 203 (355)
+|||||+||+|+||++|+++++.++++++|++|+|++++ +.+.++|+++|||++.++.+ .+.+ ++++.+.++
T Consensus 1 ~ri~vl~Sg~gsnl~ali~~~~~~~~~~~i~~Vis~~~~---~~~~~~A~~~gIp~~~~~~~~~~~r~~~~~~~~~~l~~ 77 (212)
T 1jkx_A 1 MNIVVLISGNGSNLQAIIDACKTNKIKGTVRAVFSNKAD---AFGLERARQAGIATHTLIASAFDSREAYDRELIHEIDM 77 (212)
T ss_dssp CEEEEEESSCCHHHHHHHHHHHTTSSSSEEEEEEESCTT---CHHHHHHHHTTCEEEECCGGGCSSHHHHHHHHHHHHGG
T ss_pred CEEEEEEECCcHHHHHHHHHHHcCCCCceEEEEEeCCCc---hHHHHHHHHcCCcEEEeCcccccchhhccHHHHHHHHh
Confidence 489999999999999999999999999999999999853 57899999999999987632 2222 467888887
Q ss_pred -CCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChHHHhhcCCCeEEecCCCCCCCCCchHHHHHHHh
Q 018502 204 -NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDA 282 (355)
Q Consensus 204 -~~Dlivla~y~~~~~~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~~l~~~~~~~INiHpslLP~yrG~~p~~~A~~~ 282 (355)
++|++|+++||+ |||+++++.|++++||+|||+||+|||++|++||+++
T Consensus 78 ~~~Dliv~agy~~------------------------------il~~~~l~~~~~~~iNiHpSlLP~yrG~~pi~~ai~~ 127 (212)
T 1jkx_A 78 YAPDVVVLAGFMR------------------------------ILSPAFVSHYAGRLLNIHPSLLPKYPGLHTHRQALEN 127 (212)
T ss_dssp GCCSEEEESSCCS------------------------------CCCHHHHHHTTTSEEEEESSCTTSCCSSCHHHHHHHT
T ss_pred cCCCEEEEeChhh------------------------------hCCHHHHhhccCCEEEEccCcccCCCCccHHHHHHHc
Confidence 899999999999 9999999999999999999999999999999999999
Q ss_pred CCcEeEEEEEEecCcCCCCCeeeeEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeeecCCceeeC
Q 018502 283 GVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPYEMNKTVVF 355 (355)
Q Consensus 283 G~~~~G~T~H~v~~~~D~G~Ii~q~~~~I~~~dt~~~l~~k~~~~~~~~l~~~i~~~~~~~~~~~~~~~tvvf 355 (355)
|++.+|+|+|+|++++|+||||.|+.++|.++||.++|.+|+.+++++++.++++.+.+|++.+.+ +|++++
T Consensus 128 G~~~tGvTvh~v~~~~D~G~Ii~Q~~v~I~~~dt~~~L~~rl~~~~~~ll~~~l~~~~~g~~~~~~-~~~~~~ 199 (212)
T 1jkx_A 128 GDEEHGTSVHFVTDELDGGPVILQAKVPVFAGDSEDDITARVQTQEHAIYPLVISWFADGRLKMHE-NAAWLD 199 (212)
T ss_dssp TCSEEEEEEEECCSSTTCSCEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEET-TEEEET
T ss_pred CCCceEEEEEEEcccccCCCEEEEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCceEeC-CEEEEc
Confidence 999999999999999999999999999999999999999999999999999999999999999985 898774
No 12
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=100.00 E-value=4.8e-47 Score=350.36 Aligned_cols=188 Identities=30% Similarity=0.480 Sum_probs=174.1
Q ss_pred CceEEEEEeCCchhHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeCCC-CChh---HHHHHHHhc
Q 018502 128 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAK-ENER---EEELLELVQ 203 (355)
Q Consensus 128 ~~riavl~S~~g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~-~~~~---~~~~~~~l~ 203 (355)
++|||||+||.||||++|+++++.|+++++|++|+||++ +++++++|+++|||+++++.+ .+.+ ++++.+.++
T Consensus 2 m~riavl~Sg~Gsnl~ali~~~~~~~l~~eI~~Visn~~---~a~v~~~A~~~gIp~~~~~~~~~~~r~~~d~~~~~~l~ 78 (211)
T 3p9x_A 2 MKRVAIFASGSGTNAEAIIQSQKAGQLPCEVALLITDKP---GAKVVERVKVHEIPVCALDPKTYPSKEAYEIEVVQQLK 78 (211)
T ss_dssp -CEEEEECCTTCHHHHHHHHHHHTTCCSSEEEEEEESCS---SSHHHHHHHTTTCCEEECCGGGSSSHHHHHHHHHHHHH
T ss_pred CCEEEEEEeCCchHHHHHHHHHHcCCCCcEEEEEEECCC---CcHHHHHHHHcCCCEEEeChhhcCchhhhHHHHHHHHH
Confidence 479999999999999999999999999999999999984 468999999999999887632 2222 467888886
Q ss_pred --CCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChHHHhhcCCCeEEecCCCCCCCCCchHHHHHHH
Q 018502 204 --NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFD 281 (355)
Q Consensus 204 --~~Dlivla~y~~~~~~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~~l~~~~~~~INiHpslLP~yrG~~p~~~A~~ 281 (355)
++|++|+++||+ |||+++++.+++++||+|||+||+|||++|++||+.
T Consensus 79 ~~~~Dliv~agy~~------------------------------Il~~~~l~~~~~~~iNiHpSLLP~yrG~~pi~~Ai~ 128 (211)
T 3p9x_A 79 EKQIDFVVLAGYMR------------------------------LVGPTLLGAYEGRIVNIHPSLLPAFPGLHAIEQAIR 128 (211)
T ss_dssp HTTCCEEEESSCCS------------------------------CCCHHHHHHHTTSEEEEESSCTTSSCSSCHHHHHHH
T ss_pred hcCCCEEEEeCchh------------------------------hcCHHHHhhccCCeEEECCccCCCCCCccHHHHHHH
Confidence 899999999999 999999999999999999999999999999999999
Q ss_pred hCCcEeEEEEEEecCcCCCCCeeeeEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeeec
Q 018502 282 AGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPYE 348 (355)
Q Consensus 282 ~G~~~~G~T~H~v~~~~D~G~Ii~q~~~~I~~~dt~~~l~~k~~~~~~~~l~~~i~~~~~~~~~~~~ 348 (355)
+|++.+|+|+|+|++++|+||||.|+.++|.++||.++|.+|+.++|++++.++++.+.+|+...+-
T Consensus 129 ~G~~~tGvTvh~v~~~~D~G~Ii~Q~~v~I~~~dt~~~L~~rl~~~~~~ll~~~l~~l~~g~~~~~~ 195 (211)
T 3p9x_A 129 ANVKVTGVTIHYVDEGMDTGPIIAQEAVSIEEEDTLETLTTKIQAVEHRLYPATLHKLLSKAENLYF 195 (211)
T ss_dssp TTCSEEEEEEEECCSSSSCSCEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTCTTTCCSC
T ss_pred cCCCeEEEEEEEEcCCCCCCCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCcchhh
Confidence 9999999999999999999999999999999999999999999999999999999999999887653
No 13
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=100.00 E-value=1.1e-46 Score=351.48 Aligned_cols=200 Identities=29% Similarity=0.447 Sum_probs=183.5
Q ss_pred eCCCCCCceEEEEEeCCchhHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeCCC-CChh---HHH
Q 018502 122 VPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAK-ENER---EEE 197 (355)
Q Consensus 122 ~~~~~~~~riavl~S~~g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~-~~~~---~~~ 197 (355)
+++.+.++||+||+||.|+|++.+|+++.++.++++|++|+|+++ +++++++|+++|||++.++.+ .+.+ +++
T Consensus 16 ~~~~~~~~rI~~l~SG~g~~~~~~l~~l~~~~~~~~I~~Vvt~~~---~~~~~~~A~~~gIp~~~~~~~~~~~r~~~~~~ 92 (229)
T 3auf_A 16 LYFQGHMIRIGVLISGSGTNLQAILDGCREGRIPGRVAVVISDRA---DAYGLERARRAGVDALHMDPAAYPSRTAFDAA 92 (229)
T ss_dssp SSCBTTCEEEEEEESSCCHHHHHHHHHHHTTSSSEEEEEEEESST---TCHHHHHHHHTTCEEEECCGGGSSSHHHHHHH
T ss_pred ccccCCCcEEEEEEeCCcHHHHHHHHHHHhCCCCCeEEEEEcCCC---chHHHHHHHHcCCCEEEECcccccchhhccHH
Confidence 456677889999999999999999999998888899999999975 357899999999999987632 2222 467
Q ss_pred HHHHhc--CCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChHHHhhcCCCeEEecCCCCCCCCCchH
Q 018502 198 LLELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKP 275 (355)
Q Consensus 198 ~~~~l~--~~Dlivla~y~~~~~~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~~l~~~~~~~INiHpslLP~yrG~~p 275 (355)
+.+.++ ++|++|+++||+ |||+++++.|++++||+||||||+|||++|
T Consensus 93 ~~~~l~~~~~Dliv~agy~~------------------------------IL~~~~l~~~~~~~iNiHpSLLP~yrG~~p 142 (229)
T 3auf_A 93 LAERLQAYGVDLVCLAGYMR------------------------------LVRGPMLTAFPNRILNIHPSLLPAFPGLEA 142 (229)
T ss_dssp HHHHHHHTTCSEEEESSCCS------------------------------CCCHHHHHHSTTCEEEEESSCTTSSCSSCH
T ss_pred HHHHHHhcCCCEEEEcChhH------------------------------hCCHHHHhhccCCEEEEccCcCcCCCCcCH
Confidence 778776 899999999999 999999999999999999999999999999
Q ss_pred HHHHHHhCCcEeEEEEEEecCcCCCCCeeeeEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeeecCCceeeC
Q 018502 276 AKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPYEMNKTVVF 355 (355)
Q Consensus 276 ~~~A~~~G~~~~G~T~H~v~~~~D~G~Ii~q~~~~I~~~dt~~~l~~k~~~~~~~~l~~~i~~~~~~~~~~~~~~~tvvf 355 (355)
++||+++|++.+|+|+|+|++++|+||||.|+.++|.++||.++|.+|+.+++++++.++++.+.+|++.+.+ +||++|
T Consensus 143 i~~Ai~~G~~~tGvTvh~v~~~~D~G~Ii~Q~~v~I~~~dt~~~L~~rl~~~~~~ll~~~l~~l~~g~~~~~~-~~~~~~ 221 (229)
T 3auf_A 143 QRQALEHGVKVAGCTVHFVTAGVDEGPIILQAAVPVLEGDTVEDLRRRILAEEHRIYPEAIRLFAEGRLVIEG-RRVRIL 221 (229)
T ss_dssp HHHHHHHTCSEEEEEEEECCSSTTCSCEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEET-TEEEEC
T ss_pred HHHHHHcCCCeEEEEEEEECCCCcCCCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEeC-CEEEEc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999985 999886
No 14
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=100.00 E-value=8.6e-46 Score=342.15 Aligned_cols=193 Identities=31% Similarity=0.474 Sum_probs=177.6
Q ss_pred ceEEEEEeCCchhHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeCCC-CChh---HHHHHHHhc-
Q 018502 129 YKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAK-ENER---EEELLELVQ- 203 (355)
Q Consensus 129 ~riavl~S~~g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~-~~~~---~~~~~~~l~- 203 (355)
+||+||+||.|+|++.+|+++.++.++++|++|+|++++ +.+.++|+++|||+++++.+ .+.+ ++++.+.++
T Consensus 2 ~rI~vl~SG~g~~~~~~l~~l~~~~~~~~i~~Vvs~~~~---~~~~~~A~~~gIp~~~~~~~~~~~r~~~~~~~~~~l~~ 78 (216)
T 2ywr_A 2 LKIGVLVSGRGSNLQAIIDAIESGKVNASIELVISDNPK---AYAIERCKKHNVECKVIQRKEFPSKKEFEERMALELKK 78 (216)
T ss_dssp EEEEEEECSCCHHHHHHHHHHHTTSSCEEEEEEEESCTT---CHHHHHHHHHTCCEEECCGGGSSSHHHHHHHHHHHHHH
T ss_pred CEEEEEEeCCcHHHHHHHHHHHhCCCCCeEEEEEeCCCC---hHHHHHHHHcCCCEEEeCcccccchhhhhHHHHHHHHh
Confidence 699999999999999999999888888899999999853 57899999999999987632 2222 357777776
Q ss_pred -CCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChHHHhhcCCCeEEecCCCCCCCCCchHHHHHHHh
Q 018502 204 -NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDA 282 (355)
Q Consensus 204 -~~Dlivla~y~~~~~~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~~l~~~~~~~INiHpslLP~yrG~~p~~~A~~~ 282 (355)
++|++|+++||+ |||+++++.+++++||+||||||+|||++|++||+++
T Consensus 79 ~~~Dliv~a~y~~------------------------------il~~~~l~~~~~~~iNiHpSLLP~yrG~~pi~~ai~~ 128 (216)
T 2ywr_A 79 KGVELVVLAGFMR------------------------------ILSHNFLKYFPNKVINIHPSLIPAFQGLHAQKQAVEF 128 (216)
T ss_dssp TTCCEEEESSCCS------------------------------CCCHHHHTTSTTCEEEEESSCTTTTCSTTHHHHHHHH
T ss_pred cCCCEEEEeCchh------------------------------hCCHHHHhhccCCeEEEcCCcCcCCCCccHHHHHHHc
Confidence 899999999999 9999999999999999999999999999999999999
Q ss_pred CCcEeEEEEEEecCcCCCCCeeeeEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeeecCCceeeC
Q 018502 283 GVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPYEMNKTVVF 355 (355)
Q Consensus 283 G~~~~G~T~H~v~~~~D~G~Ii~q~~~~I~~~dt~~~l~~k~~~~~~~~l~~~i~~~~~~~~~~~~~~~tvvf 355 (355)
|++.+|+|+|+|++++|+||||.|+.++|.++||.++|.+|+.+++++++.++++.+.+|++.+.+ +||+++
T Consensus 129 G~~~tGvTvh~v~~~~D~G~Ii~q~~~~i~~~dt~~~L~~rl~~~~~~ll~~~l~~~~~g~~~~~~-~~~~~~ 200 (216)
T 2ywr_A 129 GVKFSGCTVHIVDESVDAGPVIVQAVVPVLPEDDENTLADRILKWEHKILPQTVQWFAQDRIIIDG-RKVIVK 200 (216)
T ss_dssp TCSEEEEEEEECCSSSSCSCEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEET-TEEEET
T ss_pred CCCeEEEEEEEEcccCCCCCEEEEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCeecC-CeeEEe
Confidence 999999999999999999999999999999999999999999999999999999999999999885 888763
No 15
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=100.00 E-value=6e-46 Score=342.50 Aligned_cols=193 Identities=26% Similarity=0.467 Sum_probs=167.6
Q ss_pred CceEEEEEeCCchhHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeCCC-CChh---HHHHHHHhc
Q 018502 128 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAK-ENER---EEELLELVQ 203 (355)
Q Consensus 128 ~~riavl~S~~g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~-~~~~---~~~~~~~l~ 203 (355)
++||+||+||.|+|++.+|+++.++.++++|++|+|+++ ++++.++|+++|||++.++.+ .+.+ ++++.+.++
T Consensus 3 m~ki~vl~sG~g~~~~~~l~~l~~~~l~~~I~~Vit~~~---~~~v~~~A~~~gIp~~~~~~~~~~~~~~~~~~~~~~l~ 79 (212)
T 3av3_A 3 MKRLAVFASGSGTNFQAIVDAAKRGDLPARVALLVCDRP---GAKVIERAARENVPAFVFSPKDYPSKAAFESEILRELK 79 (212)
T ss_dssp CEEEEEECCSSCHHHHHHHHHHHTTCCCEEEEEEEESST---TCHHHHHHHHTTCCEEECCGGGSSSHHHHHHHHHHHHH
T ss_pred CcEEEEEEECCcHHHHHHHHHHHhCCCCCeEEEEEeCCC---CcHHHHHHHHcCCCEEEeCcccccchhhhHHHHHHHHH
Confidence 479999999999999999999999988899999999975 358999999999999987632 1222 457777776
Q ss_pred --CCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChHHHhhcCCCeEEecCCCCCCCCCchHHHHHHH
Q 018502 204 --NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFD 281 (355)
Q Consensus 204 --~~Dlivla~y~~~~~~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~~l~~~~~~~INiHpslLP~yrG~~p~~~A~~ 281 (355)
++|++|+++||+ |||+++++.|++++||+||||||+|||++|++||++
T Consensus 80 ~~~~Dliv~a~y~~------------------------------il~~~~l~~~~~~~iNiHpSLLP~yrG~~pi~~Ai~ 129 (212)
T 3av3_A 80 GRQIDWIALAGYMR------------------------------LIGPTLLSAYEGKIVNIHPSLLPAFPGKDAIGQAYR 129 (212)
T ss_dssp HTTCCEEEESSCCS------------------------------CCCHHHHHHTTTCEEEEESSCTTSSCSTTHHHHHHH
T ss_pred hcCCCEEEEchhhh------------------------------hCCHHHHhhhcCCEEEEecCcCCCCCCcCHHHHHHH
Confidence 899999999999 999999999999999999999999999999999999
Q ss_pred hCCcEeEEEEEEecCcCCCCCeeeeEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhC------CeeeecCCceee
Q 018502 282 AGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCEL------RVLPYEMNKTVV 354 (355)
Q Consensus 282 ~G~~~~G~T~H~v~~~~D~G~Ii~q~~~~I~~~dt~~~l~~k~~~~~~~~l~~~i~~~~~~------~~~~~~~~~tvv 354 (355)
+|++.+|+|+|+|++++|+||||.|+.++|.++||.++|.+|+.++|++++.++++.+++| ++..++ +|||+
T Consensus 130 ~G~~~tGvTvh~v~~~~D~G~Ii~Q~~v~I~~~dt~~~L~~r~~~~~~~ll~~~l~~~~~g~~~~~~~~~~~~-~~t~~ 207 (212)
T 3av3_A 130 AGVSETGVTVHYVDEGMDTGPVIAQRVVPIVPGEPIEALEERIHQVEHELYPTVLRMLLGEKEQQEERIENDG-SETSI 207 (212)
T ss_dssp HTCSEEEEEEEECCSSSSCSCEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHC-------------------
T ss_pred cCCCeEEEEEEEECCCCCCCCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccceeecC-Ccccc
Confidence 9999999999999999999999999999999999999999999999999999999999855 555554 88874
No 16
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=100.00 E-value=4.8e-40 Score=319.17 Aligned_cols=185 Identities=23% Similarity=0.324 Sum_probs=166.1
Q ss_pred CCceEEEEEeCC--chhHHHHHhhhhcCCCCeEEEEEEeCCCCCC-------CchHHHHHHHCCCCeEEeCCCCChhHHH
Q 018502 127 PKYKVAVLASKQ--EHCLVDFLYGWQEGKLPVEITCVISNHDRGP-------NSHVIRFLERHGIPYHYLCAKENEREEE 197 (355)
Q Consensus 127 ~~~riavl~S~~--g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~-------~~~v~~~a~~~gIP~~~~~~~~~~~~~~ 197 (355)
+++||+||+|+. .+||++|++. | ++|++|+|+++++. .+++.++|+++|||++. +. +.++++
T Consensus 2 ~~mrIvf~Gt~~fa~~~L~~L~~~---~---~~i~~Vvt~pd~p~grg~~~~~~~v~~~A~~~gIpv~~-~~--~~~~~~ 72 (314)
T 1fmt_A 2 ESLRIIFAGTPDFAARHLDALLSS---G---HNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVFQ-PV--SLRPQE 72 (314)
T ss_dssp CCCEEEEEECSHHHHHHHHHHHHT---T---CEEEEEECCCCBC------CBCCHHHHHHHHTTCCEEC-CS--CSCSHH
T ss_pred CCCEEEEEecCHHHHHHHHHHHHC---C---CcEEEEEeCCCCccccccccCcCHHHHHHHHcCCcEEe-cC--CCCCHH
Confidence 468999999988 6899999874 3 79999999976542 36899999999999964 32 223456
Q ss_pred HHHHhc--CCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChHHHhhcCCCeEEecCCCCCCCCCchH
Q 018502 198 LLELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKP 275 (355)
Q Consensus 198 ~~~~l~--~~Dlivla~y~~~~~~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~~l~~~~~~~INiHpslLP~yrG~~p 275 (355)
+.+.++ ++|++|+++||+ |||+++++.++++|||+||||||+|||++|
T Consensus 73 ~~~~l~~~~~Dliv~~~y~~------------------------------ilp~~il~~~~~g~iNiHpSLLP~yRG~~p 122 (314)
T 1fmt_A 73 NQQLVAELQADVMVVVAYGL------------------------------ILPKAVLEMPRLGCINVHGSLLPRWRGAAP 122 (314)
T ss_dssp HHHHHHHTTCSEEEEESCCS------------------------------CCCHHHHHSSTTCEEEEESSSTTTTBSSCH
T ss_pred HHHHHHhcCCCEEEEeeccc------------------------------cCCHHHHhhccCCEEEEcCCcCcCCCCcCH
Confidence 777776 899999999999 999999999999999999999999999999
Q ss_pred HHHHHHhCCcEeEEEEEEecCcCCCCCeeeeEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeeecCC
Q 018502 276 AKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPYEMN 350 (355)
Q Consensus 276 ~~~A~~~G~~~~G~T~H~v~~~~D~G~Ii~q~~~~I~~~dt~~~l~~k~~~~~~~~l~~~i~~~~~~~~~~~~~~ 350 (355)
++||+++|++++|+|+|+|++++|+||||.|+.++|.++||.++|++|+.+++++++.++++.+.+|++.+.+|+
T Consensus 123 i~~Ai~~G~~~tGvTih~~~~~~D~G~Ii~q~~~~I~~~dt~~~L~~rl~~~~~~ll~~~l~~l~~g~~~~~~Q~ 197 (314)
T 1fmt_A 123 IQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQD 197 (314)
T ss_dssp HHHHHHHTCSEEEEEEEECCSSSSCSCEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCBCCC
T ss_pred HHHHHHcCCCceEEEEEEEcccCcCCCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCceecCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999998876654
No 17
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=100.00 E-value=6.9e-40 Score=316.81 Aligned_cols=183 Identities=21% Similarity=0.272 Sum_probs=164.0
Q ss_pred ceEEEEEeCC--chhHHHHHhhhhcCCCCeEEEEEEeCCCCCC----CchHHHHHHHCCCCeEEeCCCCChhHHHHHHHh
Q 018502 129 YKVAVLASKQ--EHCLVDFLYGWQEGKLPVEITCVISNHDRGP----NSHVIRFLERHGIPYHYLCAKENEREEELLELV 202 (355)
Q Consensus 129 ~riavl~S~~--g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~----~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l 202 (355)
+||+||+|+. .+||++|+++ +++|++|+|+++++. .+++.++|+++|||++...+ .+++++.+.+
T Consensus 1 mrivf~gt~~fa~~~L~~L~~~------~~~i~~Vvt~~d~~~g~~~~~~v~~~A~~~gIpv~~~~~---~~~~~~~~~l 71 (305)
T 2bln_A 1 MKTVVFAYHDMGCLGIEALLAA------GYEISAIFTHTDNPGEKAFYGSVARLAAERGIPVYAPDN---VNHPLWVERI 71 (305)
T ss_dssp CEEEEEECHHHHHHHHHHHHHT------TCEEEEEECCCC------CCCCHHHHHHHHTCCEECCSC---CCSHHHHHHH
T ss_pred CEEEEEEcCHHHHHHHHHHHHC------CCcEEEEEcCCCCCCCCcCccHHHHHHHHcCCCEECCCc---CCcHHHHHHH
Confidence 5999999988 7899999975 479999999987642 25799999999999987543 2234566666
Q ss_pred c--CCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChHHHhhcCCCeEEecCCCCCCCCCchHHHHHH
Q 018502 203 Q--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAF 280 (355)
Q Consensus 203 ~--~~Dlivla~y~~~~~~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~~l~~~~~~~INiHpslLP~yrG~~p~~~A~ 280 (355)
+ ++|++|+++||+ |||+++++.++++|||+||||||+|||++|++||+
T Consensus 72 ~~~~~Dliv~~~y~~------------------------------ilp~~il~~~~~g~iNiHpSLLP~yRG~~pi~~ai 121 (305)
T 2bln_A 72 AQLSPDVIFSFYYRH------------------------------LIYDEILQLAPAGAFNLHGSLLPKYRGRAPLNWVL 121 (305)
T ss_dssp HHTCCSEEEEESCCS------------------------------CCCHHHHTTCTTCEEEEESSCTTTTEESCHHHHHH
T ss_pred HhcCCCEEEEecccc------------------------------ccCHHHHhcCcCCEEEecCCcCcCCCCccHHHHHH
Confidence 5 899999999999 99999999999999999999999999999999999
Q ss_pred HhCCcEeEEEEEEecCcCCCCCeeeeEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeeecCC
Q 018502 281 DAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPYEMN 350 (355)
Q Consensus 281 ~~G~~~~G~T~H~v~~~~D~G~Ii~q~~~~I~~~dt~~~l~~k~~~~~~~~l~~~i~~~~~~~~~~~~~~ 350 (355)
++|++++|+|+|+|++++|+||||.|+.++|.++||.++|.+|+.+++++++.++++.+.+|++.+.+|+
T Consensus 122 ~~G~~~tGvTih~~~~~~D~G~Ii~q~~~~I~~~dt~~~L~~rl~~~~~~ll~~~l~~l~~g~~~~~~Q~ 191 (305)
T 2bln_A 122 VNGETETGVTLHRMVKRADAGAIVAQLRIAIAPDDIAITLHHKLCHAARQLLEQTLPAIKHGNILEIAQR 191 (305)
T ss_dssp HTTCSEEEEEEEECCSSTTCSCEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCBCCC
T ss_pred HcCCCcEEEEEEEECCCccCCCeEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCceecCC
Confidence 9999999999999999999999999999999999999999999999999999999999999998776554
No 18
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=100.00 E-value=5.1e-39 Score=312.64 Aligned_cols=185 Identities=19% Similarity=0.293 Sum_probs=164.1
Q ss_pred CCceEEEEEeCCc--hhHHHHHhhhhcCCCCeEEEEEEeCCCCCC-------CchHHHHHHHCCCCeEEeCCCCChhHHH
Q 018502 127 PKYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGP-------NSHVIRFLERHGIPYHYLCAKENEREEE 197 (355)
Q Consensus 127 ~~~riavl~S~~g--~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~-------~~~v~~~a~~~gIP~~~~~~~~~~~~~~ 197 (355)
+++||++|+|..- .||++|+++ +++|++|+|+++++. .+++.++|+++|||++. +. +.++++
T Consensus 6 ~~mrivf~Gt~~fa~~~L~~L~~~------~~~v~~Vvt~pd~p~grg~~~~~~~v~~~A~~~gIpv~~-~~--~~~~~~ 76 (318)
T 3q0i_A 6 QSLRIVFAGTPDFAARHLAALLSS------EHEIIAVYTQPERPAGRGKKLTASPVKTLALEHNVPVYQ-PE--NFKSDE 76 (318)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTS------SSEEEEEECCCC---------CCCHHHHHHHHTTCCEEC-CS--CSCSHH
T ss_pred cCCEEEEEecCHHHHHHHHHHHHC------CCcEEEEEcCCCCcccccccCCCCHHHHHHHHcCCCEEc-cC--cCCCHH
Confidence 3689999999863 689998864 479999999887542 46899999999999864 32 223456
Q ss_pred HHHHhc--CCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChHHHhhcCCCeEEecCCCCCCCCCchH
Q 018502 198 LLELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKP 275 (355)
Q Consensus 198 ~~~~l~--~~Dlivla~y~~~~~~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~~l~~~~~~~INiHpslLP~yrG~~p 275 (355)
+.+.++ ++|++|+++||+ |||+++++.++++|||+|||+||+|||++|
T Consensus 77 ~~~~l~~~~~Dliv~~~y~~------------------------------ilp~~~l~~~~~g~iNiHpSlLP~yRG~~p 126 (318)
T 3q0i_A 77 SKQQLAALNADLMVVVAYGL------------------------------LLPKVVLDTPKLGCINVHGSILPRWRGAAP 126 (318)
T ss_dssp HHHHHHTTCCSEEEESSCCS------------------------------CCCHHHHTSSTTCEEEEESSSTTTTBSSCH
T ss_pred HHHHHHhcCCCEEEEeCccc------------------------------cCCHHHHhhCcCCEEEeCCccCcCCCCcCH
Confidence 777776 899999999999 999999999999999999999999999999
Q ss_pred HHHHHHhCCcEeEEEEEEecCcCCCCCeeeeEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeeecCC
Q 018502 276 AKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPYEMN 350 (355)
Q Consensus 276 ~~~A~~~G~~~~G~T~H~v~~~~D~G~Ii~q~~~~I~~~dt~~~l~~k~~~~~~~~l~~~i~~~~~~~~~~~~~~ 350 (355)
++||+.+|++.+|+|+|+|++++|+||||.|+.++|.++||.++|++|+.+++++++.++++.+.+|++.+.+++
T Consensus 127 i~~Ai~~G~~~tGvTih~~~~~~D~G~Ii~q~~~~I~~~dt~~~L~~rl~~~~~~ll~~~l~~l~~g~~~~~~Q~ 201 (318)
T 3q0i_A 127 IQRSIWAGDSETGVTIMQMDVGLDTGDMLKIATLPIEASDTSASMYDKLAELGPQALLECLQDIAQGTAVAVKQD 201 (318)
T ss_dssp HHHHHHHTCSEEEEEEEECCSSSSCSCEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCBCCC
T ss_pred HHHHHHcCCCeEEEEEEEEcCCCCCCCEEEEEEEeeCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999998876654
No 19
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=100.00 E-value=3e-38 Score=306.67 Aligned_cols=184 Identities=21% Similarity=0.285 Sum_probs=163.4
Q ss_pred CceEEEEEeCCc--hhHHHHHhhhhcCCCCeEEEEEEeCCCCCC-------CchHHHHHHHCCCCeEEeCCCCChhHHHH
Q 018502 128 KYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGP-------NSHVIRFLERHGIPYHYLCAKENEREEEL 198 (355)
Q Consensus 128 ~~riavl~S~~g--~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~-------~~~v~~~a~~~gIP~~~~~~~~~~~~~~~ 198 (355)
++||++|++..- .||+.|++. .++|++|+|+++++. .+++.++|+++|||++. +. +.+++++
T Consensus 2 ~mrivf~Gtp~fa~~~L~~L~~~------~~~v~~Vvt~pd~~~grg~~l~~~~v~~~A~~~gIpv~~-~~--~~~~~~~ 72 (314)
T 3tqq_A 2 SLKIVFAGTPQFAVPTLRALIDS------SHRVLAVYTQPDRPSGRGQKIMESPVKEIARQNEIPIIQ-PF--SLRDEVE 72 (314)
T ss_dssp CCEEEEEECSGGGHHHHHHHHHS------SSEEEEEECCCC----------CCHHHHHHHHTTCCEEC-CS--CSSSHHH
T ss_pred CcEEEEECCCHHHHHHHHHHHHC------CCeEEEEEeCCCCccccCCccCCCHHHHHHHHcCCCEEC-cc--cCCCHHH
Confidence 579999999875 488888863 379999999877642 47899999999999864 32 2234567
Q ss_pred HHHhc--CCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChHHHhhcCCCeEEecCCCCCCCCCchHH
Q 018502 199 LELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPA 276 (355)
Q Consensus 199 ~~~l~--~~Dlivla~y~~~~~~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~~l~~~~~~~INiHpslLP~yrG~~p~ 276 (355)
.+.++ ++|++|+++||+ |||+++++.++++|||+|||+||+|||++|+
T Consensus 73 ~~~l~~~~~Dliv~~~~~~------------------------------ilp~~il~~~~~g~iNiHpSlLP~yRG~~pi 122 (314)
T 3tqq_A 73 QEKLIAMNADVMVVVAYGL------------------------------ILPKKALNAFRLGCVNVHASLLPRWRGAAPI 122 (314)
T ss_dssp HHHHHTTCCSEEEEESCCS------------------------------CCCHHHHTSSTTCEEEEESSCTTTTBSSCHH
T ss_pred HHHHHhcCCCEEEEcCccc------------------------------ccCHHHHhhCcCCEEEecCccccCCCCccHH
Confidence 77776 899999999999 9999999999999999999999999999999
Q ss_pred HHHHHhCCcEeEEEEEEecCcCCCCCeeeeEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeeecCC
Q 018502 277 KQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPYEMN 350 (355)
Q Consensus 277 ~~A~~~G~~~~G~T~H~v~~~~D~G~Ii~q~~~~I~~~dt~~~l~~k~~~~~~~~l~~~i~~~~~~~~~~~~~~ 350 (355)
+||+.+|++.+|+|+|+|++++|+||||.|+.++|.++||.++|++|+.+++++++.++++.+.+|++.+.+++
T Consensus 123 ~~Ai~~G~~~tGvTih~~~~~~D~G~Ii~q~~~~I~~~dt~~~L~~rl~~~~~~ll~~~l~~l~~g~~~~~~Q~ 196 (314)
T 3tqq_A 123 QRAILAGDRETGISIMQMNEGLDTGDVLAKSACVISSEDTAADLHDRLSLIGADLLLESLAKLEKGDIKLEKQD 196 (314)
T ss_dssp HHHHHHTCSEEEEEEEECCSSSSCSCEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCBCCC
T ss_pred HHHHHcCCCeeEEEEEeeecCCCCCCEEEEEEEeeCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999998876654
No 20
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=100.00 E-value=2.4e-38 Score=307.85 Aligned_cols=186 Identities=26% Similarity=0.387 Sum_probs=165.0
Q ss_pred CCCceEEEEEeCCc--hhHHHHHhhhhcCCCCeEEEEEEeCCCCCC-------CchHHHHHHHCCCCeEEeCCCCChhHH
Q 018502 126 DPKYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGP-------NSHVIRFLERHGIPYHYLCAKENEREE 196 (355)
Q Consensus 126 ~~~~riavl~S~~g--~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~-------~~~v~~~a~~~gIP~~~~~~~~~~~~~ 196 (355)
.+++||++|++... .||+.|++. +++|++|+|+++++. .+++.++|+++|||++. +.+ .+++
T Consensus 2 ~~mmrIvf~Gtp~fa~~~L~~L~~~------~~~v~~Vvt~pd~~~gRg~~l~~~pv~~~A~~~gIpv~~-~~~--~~~~ 72 (317)
T 3rfo_A 2 NAMIKVVFMGTPDFSVPVLRRLIED------GYDVIGVVTQPDRPVGRKKVLTPTPVKVEAEKHGIPVLQ-PLR--IREK 72 (317)
T ss_dssp CTTSEEEEECCSTTHHHHHHHHHHT------TCEEEEEECCCCCEETTTTEECCCHHHHHHHHTTCCEEC-CSC--TTSH
T ss_pred CCceEEEEEeCCHHHHHHHHHHHHC------CCcEEEEEeCCCcccCCCcccCCCHHHHHHHHcCCCEEc-ccc--CCCH
Confidence 46789999999875 588888864 379999999987642 46899999999999875 322 2233
Q ss_pred HHHHHhc--CCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChHHHhhcCCCeEEecCCCCCCCCCch
Q 018502 197 ELLELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGK 274 (355)
Q Consensus 197 ~~~~~l~--~~Dlivla~y~~~~~~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~~l~~~~~~~INiHpslLP~yrG~~ 274 (355)
+.++.++ ++|++|+++||+ |||+++++.++++|||+|||+||+|||++
T Consensus 73 ~~~~~l~~~~~Dliv~~~y~~------------------------------ilp~~~l~~~~~g~iNiHpSlLP~yRG~~ 122 (317)
T 3rfo_A 73 DEYEKVLALEPDLIVTAAFGQ------------------------------IVPNEILEAPKYGCINVHASLLPELRGGA 122 (317)
T ss_dssp HHHHHHHHHCCSEEEESSCCS------------------------------CCCHHHHHSSTTCEEEEESSCTTSSBSSC
T ss_pred HHHHHHHhcCCCEEEEcCchh------------------------------hCCHHHHhhCcCCEEEECCccCcCCCCcC
Confidence 4555565 899999999999 99999999999999999999999999999
Q ss_pred HHHHHHHhCCcEeEEEEEEecCcCCCCCeeeeEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeeecCC
Q 018502 275 PAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPYEMN 350 (355)
Q Consensus 275 p~~~A~~~G~~~~G~T~H~v~~~~D~G~Ii~q~~~~I~~~dt~~~l~~k~~~~~~~~l~~~i~~~~~~~~~~~~~~ 350 (355)
|++||+.+|++.+|+|+|+|++++|+||||.|+.++|.++||.++|++|+.+++++++.++++.+.+|++.+.+++
T Consensus 123 pi~~Ai~~G~~~tGvTih~~~~~~DtG~Ii~q~~~~I~~~dt~~~L~~rl~~~~~~ll~~~l~~l~~g~~~~~~Q~ 198 (317)
T 3rfo_A 123 PIHYAIMEGKEKTGITIMYMVEKLDAGDILTQVEVEIEERETTGSLFDKLSEAGAHLLSKTVPLLIQGKLEPIKQN 198 (317)
T ss_dssp HHHHHHHTTCSEEEEEEEECCSSTTCSCEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCBCCC
T ss_pred HHHHHHHcCCCceEEEEEEEcccCCCCCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999998776654
No 21
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=100.00 E-value=8.9e-38 Score=325.61 Aligned_cols=183 Identities=21% Similarity=0.272 Sum_probs=164.7
Q ss_pred ceEEEEEeCC--chhHHHHHhhhhcCCCCeEEEEEEeCCCCCC----CchHHHHHHHCCCCeEEeCCCCChhHHHHHHHh
Q 018502 129 YKVAVLASKQ--EHCLVDFLYGWQEGKLPVEITCVISNHDRGP----NSHVIRFLERHGIPYHYLCAKENEREEELLELV 202 (355)
Q Consensus 129 ~riavl~S~~--g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~----~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l 202 (355)
+||+||+|+. ++||++|+++ +++|++|+|+++++. .+++.++|+++|||++...+ .+++++++.+
T Consensus 1 ~ri~~~~s~~~~~~~l~~l~~~------~~~i~~v~t~~~~~~~~~~~~~~~~~a~~~~ip~~~~~~---~~~~~~~~~l 71 (660)
T 1z7e_A 1 MKTVVFAYHDMGCLGIEALLAA------GYEISAIFTHTDNPGEKAFYGSVARLAAERGIPVYAPDN---VNHPLWVERI 71 (660)
T ss_dssp CEEEEEECHHHHHHHHHHHHHT------TCEEEEEECCCC--------CCHHHHHHHHTCCEECCSC---TTSHHHHHHH
T ss_pred CEEEEEEeCHHHHHHHHHHHhC------CCCEEEEEeCCCCCccCcCccHHHHHHHHcCCCEeccCC---CCcHHHHHHH
Confidence 5999999998 7999999985 489999999987632 25799999999999987543 2334666666
Q ss_pred c--CCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChHHHhhcCCCeEEecCCCCCCCCCchHHHHHH
Q 018502 203 Q--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAF 280 (355)
Q Consensus 203 ~--~~Dlivla~y~~~~~~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~~l~~~~~~~INiHpslLP~yrG~~p~~~A~ 280 (355)
+ ++|++|+++||+ |||+++++.++++|||+||||||+|||++|++||+
T Consensus 72 ~~~~~d~iv~~~~~~------------------------------il~~~~l~~~~~~~iNiH~slLP~~rG~~p~~~ai 121 (660)
T 1z7e_A 72 AQLSPDVIFSFYYRH------------------------------LIYDEILQLAPAGAFNLHGSLLPKYRGRAPLNWVL 121 (660)
T ss_dssp HHHCCSEEEEESCCS------------------------------CCCHHHHTTCTTCEEEEESSSTTTTCSSCHHHHHH
T ss_pred HhcCCCEEEEcCccc------------------------------ccCHHHHhcCCCCeEEecCCcCCCCCCccHHHHHH
Confidence 5 899999999999 99999999999999999999999999999999999
Q ss_pred HhCCcEeEEEEEEecCcCCCCCeeeeEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeeecCC
Q 018502 281 DAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPYEMN 350 (355)
Q Consensus 281 ~~G~~~~G~T~H~v~~~~D~G~Ii~q~~~~I~~~dt~~~l~~k~~~~~~~~l~~~i~~~~~~~~~~~~~~ 350 (355)
++|++.+|+|+|+|++++|+||||.|+.++|.++||.++|.+|+.+++++++.++++.+.+|++.+.+|+
T Consensus 122 ~~g~~~~G~t~~~~~~~~D~G~ii~q~~~~i~~~dt~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~q~ 191 (660)
T 1z7e_A 122 VNGETETGVTLHRMVKRADAGAIVAQLRIAIAPDDIAITLHHKLCHAARQLLEQTLPAIKHGNILEIAQR 191 (660)
T ss_dssp HTTCSEEEEEEEECCSSTTTSCEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCBCCC
T ss_pred HcCCCcEEEEEEEECCCccCCCeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeeCC
Confidence 9999999999999999999999999999999999999999999999999999999999999998876654
No 22
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=100.00 E-value=1.3e-37 Score=303.77 Aligned_cols=188 Identities=16% Similarity=0.187 Sum_probs=159.2
Q ss_pred CceEEEEEeCCchhHH-HHHhhhhcCCCCeEEEEEEeCCCCC-CCchHHHHHHHCCCCeEEeCCCC--ChhHHHHHHHhc
Q 018502 128 KYKVAVLASKQEHCLV-DFLYGWQEGKLPVEITCVISNHDRG-PNSHVIRFLERHGIPYHYLCAKE--NEREEELLELVQ 203 (355)
Q Consensus 128 ~~riavl~S~~g~~L~-~ll~~~~~~~l~~eI~~Vis~~~~~-~~~~v~~~a~~~gIP~~~~~~~~--~~~~~~~~~~l~ 203 (355)
++||+||++. ++. .+|+++.++ .++|++|+|.++++ ..+++.++|+++|||++..+... ...++++++.++
T Consensus 22 ~mrIvf~G~~---~fa~~~L~~L~~~--~~~i~~Vvt~pd~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~~~~~l~ 96 (329)
T 2bw0_A 22 SMKIAVIGQS---LFGQEVYCHLRKE--GHEVVGVFTVPDKDGKADPLGLEAEKDGVPVFKYSRWRAKGQALPDVVAKYQ 96 (329)
T ss_dssp CCEEEEECCH---HHHHHHHHHHHHT--TCEEEEEEECCCCSSCCCHHHHHHHHHTCCEEECSCCEETTEECHHHHHHHH
T ss_pred CCEEEEEcCc---HHHHHHHHHHHHC--CCeEEEEEeCCCcCCCCCHHHHHHHHcCCCEEecCcccccccccHHHHHHHH
Confidence 4899999643 333 234443333 37999999977653 24689999999999998865311 112356777776
Q ss_pred --CCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChHHHhhcCCCeEEecCCCCCCCCCchHHHHHHH
Q 018502 204 --NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFD 281 (355)
Q Consensus 204 --~~Dlivla~y~~~~~~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~~l~~~~~~~INiHpslLP~yrG~~p~~~A~~ 281 (355)
++|++|+++||+ |||+++++.++++|||+||||||+|||++|++||++
T Consensus 97 ~~~~Dliv~a~y~~------------------------------ilp~~il~~~~~g~iNiHpSLLP~yRG~~pi~~Ai~ 146 (329)
T 2bw0_A 97 ALGAELNVLPFCSQ------------------------------FIPMEIISAPRHGSIIYHPSLLPRHRGASAINWTLI 146 (329)
T ss_dssp TTCCSEEEESSCSS------------------------------CCCHHHHTCSTTCEEEEESSCTTTTBSSCHHHHHHH
T ss_pred hcCCCEEEEeehhh------------------------------hCCHHHHhhCcCCEEEEcCCcCcCCCCcCHHHHHHH
Confidence 899999999999 999999999999999999999999999999999999
Q ss_pred hCCcEeEEEEEEecCcCCCCCeeeeEEEeCCCCCCHHHHHHHH-HHHHHHHHHHHHHHHHhCCeeeecCC
Q 018502 282 AGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKS-EDVEKQCLAKAIKSYCELRVLPYEMN 350 (355)
Q Consensus 282 ~G~~~~G~T~H~v~~~~D~G~Ii~q~~~~I~~~dt~~~l~~k~-~~~~~~~l~~~i~~~~~~~~~~~~~~ 350 (355)
+|++.+|+|+|+|++++|+||||.|+.++|.++||.++|++|+ ...+.+++.++++.+.+|++.+.+|+
T Consensus 147 ~G~~~tGvTvh~~~~~lDtG~Ii~Q~~v~I~~~dt~~~L~~r~l~~~~~~ll~~~l~~l~~g~~~~~~Q~ 216 (329)
T 2bw0_A 147 HGDKKGGFSIFWADDGLDTGDLLLQKECEVLPDDTVSTLYNRFLFPEGIKGMVQAVRLIAEGKAPRLPQP 216 (329)
T ss_dssp TTCSEEEEEEEECCSSSSCSCEEEEEEEECCTTCCHHHHHHHTTTHHHHHHHHHHHHHHHHTCCCCBCCC
T ss_pred cCCCcEEEEEEEECCcCcCCCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcccCC
Confidence 9999999999999999999999999999999999999999994 78999999999999999988765543
No 23
>1zgh_A Methionyl-tRNA formyltransferase; southeast collaboratory FO structural genomics, PSI, protein structure initiative, secsg; 2.05A {Clostridium thermocellum} SCOP: b.46.1.1 c.65.1.1
Probab=99.95 E-value=2e-28 Score=232.34 Aligned_cols=108 Identities=15% Similarity=0.282 Sum_probs=99.3
Q ss_pred CCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChHHHhhcCCCeEEecCCCCCCCCCchHHHHHHHhC
Q 018502 204 NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAG 283 (355)
Q Consensus 204 ~~Dlivla~y~~~~~~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~~l~~~~~~~INiHpslLP~yrG~~p~~~A~~~G 283 (355)
++|++|+++||+ |||+++++. .+|||+|||+||+|||++|++||+.+|
T Consensus 77 ~pDliv~~~y~~------------------------------ilp~~il~~--~g~iNiHpSLLP~yRG~~pi~~Ai~~G 124 (260)
T 1zgh_A 77 NPEYILFPHWSW------------------------------IIPKEIFEN--FTCVVFHMTDLPFGRGGSPLQNLIERG 124 (260)
T ss_dssp CCSEEEESSCCS------------------------------CCCHHHHTT--SCEEEEESSCTTTTEESCHHHHHHHTT
T ss_pred CCCEEEEecccc------------------------------ccCHHHHcc--CCEEEEeCCcCCCCCCcCHHHHHHHcC
Confidence 899999999999 999999997 469999999999999999999999999
Q ss_pred CcEeEEEEEEecCcCCCCCeeeeEEEeCCCCCCHHHHHHHHHHHHH-HHHHHHHHHHHhCCeeeecC
Q 018502 284 VKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEK-QCLAKAIKSYCELRVLPYEM 349 (355)
Q Consensus 284 ~~~~G~T~H~v~~~~D~G~Ii~q~~~~I~~~dt~~~l~~k~~~~~~-~~l~~~i~~~~~~~~~~~~~ 349 (355)
++.+|+|+|+|++++|+||||.|+.++|. ||.++|++|+.++++ +++.+.+ +|++.+.+|
T Consensus 125 ~~~tGvTih~~~~~lDtG~Ii~Q~~v~I~--dt~~~L~~rl~~~~~~~ll~~~~----~g~~~~~pQ 185 (260)
T 1zgh_A 125 IKKTKISAIKVDGGIDTGDIFFKRDLDLY--GTAEEIFMRASKIIFNDMIPELL----TKRPVPQKQ 185 (260)
T ss_dssp CCEEEEEEEECCSSSSCSCEEEEEEEECC--SCHHHHHHHHHHHHHHTHHHHHH----HHCCCCBCC
T ss_pred CCcEEEEEEEEccCccCCCeEEEEEEecc--CCHHHHHHHHHHHHHHHHHHHHH----cCCCcceeC
Confidence 99999999999999999999999999999 899999999999998 8877655 556555443
No 24
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=99.77 E-value=1.8e-18 Score=170.57 Aligned_cols=120 Identities=10% Similarity=0.041 Sum_probs=93.5
Q ss_pred cccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHHHHhhhhhccce
Q 018502 40 LTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMRSV 119 (355)
Q Consensus 40 ~~~~ILTV~GpDr~GIVA~VS~~La~~g~NIld~~q~id~~~g~F~Mr~~v~~~~~~~~~~~L~~~l~~la~~lg~~~~~ 119 (355)
.++++|||+|||||||||+||++|+++||||+|++|+++ +|.||||++|+.++...+.++|+++|+++++++|| .
T Consensus 10 ~~~~~lt~~g~Dr~Giv~~vs~~l~~~~~nI~d~~q~~~--~~~f~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~---~ 84 (415)
T 3p96_A 10 KVSVLITVTGVDQPGVTATLFEVLSRHGVELLNVEQVVI--RHRLTLGVLVCCPADVADGPALRHDVEAAIRKVGL---D 84 (415)
T ss_dssp CEEEEEEEEEECCTTHHHHHHHHHTTTTCEEEEEEEEEE--TTEEEEEEEEEECHHHHTSHHHHHHHHHHHHHTTC---E
T ss_pred CCeEEEEEEcCCCCCHHHHHHHHHHHCCCCEEEeeeEEE--CCEeEEEEEEEecCCcCCHHHHHHHHHHHHHHcCe---E
Confidence 467999999999999999999999999999999999976 89999999999986433568999999999999998 5
Q ss_pred eeeCCCCCC-------ceEEEEEeCC--chhHHHHHhhhhcCCCCeEEEEEEeC
Q 018502 120 VRVPDIDPK-------YKVAVLASKQ--EHCLVDFLYGWQEGKLPVEITCVISN 164 (355)
Q Consensus 120 ~~~~~~~~~-------~riavl~S~~--g~~L~~ll~~~~~~~l~~eI~~Vis~ 164 (355)
|++.+.+.+ .-++.+.+.. ++++.++...+.+..++++-..-+++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~llg~~~~~~~~~~i~~~l~~~~~Ni~~l~~~~~ 138 (415)
T 3p96_A 85 VSIERSDDVPIIREPSTHTIFVLGRPITAAAFGAVAREVAALGVNIDLIRGVSD 138 (415)
T ss_dssp EEEEECSSSCSSCCCCSEEEEEEESSCCHHHHHHHHHHHHHTTCEEEEEEEEES
T ss_pred EEEEECCcccccCCCCcEEEEEEeCCCCHHHHHHHHHHHHHcCCCccceeeccC
Confidence 666543322 2244444444 67788877777666555554445553
No 25
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=99.57 E-value=2.9e-15 Score=135.25 Aligned_cols=83 Identities=18% Similarity=0.248 Sum_probs=73.2
Q ss_pred CCCcccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccC----CCCeEEEEEEEEeCCCCCChHHHHHHHHHHHhh
Q 018502 37 SPTLTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPE----KKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKM 112 (355)
Q Consensus 37 ~~~~~~~ILTV~GpDr~GIVA~VS~~La~~g~NIld~~q~id~----~~g~F~Mr~~v~~~~~~~~~~~L~~~l~~la~~ 112 (355)
.+..++++|||+|+|||||||+||++|+++|+||++++|++++ ..+.|+|+++++.+. ..+ ++|+++|.+++++
T Consensus 88 ~~~~~~~iltv~g~DrpGiva~Vt~~La~~g~nI~~~~~~t~~~~~~~~~~F~m~~~~~~~~-~~~-~~l~~~l~~~a~~ 165 (195)
T 2nyi_A 88 SPDTREYELYVEGPDSEGIVEAVTAVLAKKGANIVELETETLPAPFAGFTLFRMGSRVAFPF-PLY-QEVVTALSRVEEE 165 (195)
T ss_dssp CTTEEEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEEECSSTTCEEEEEEEEEEEEG-GGH-HHHHHHHHHHHHH
T ss_pred CCCCcEEEEEEEeCCCcCHHHHHHHHHHHcCCCEEEceeeecccccCCCCeEEEEEEEEcCC-Ccc-HHHHHHHHHHHHH
Confidence 4556789999999999999999999999999999999999875 568999999999875 446 9999999999999
Q ss_pred hhhccceeeeCC
Q 018502 113 FNAMRSVVRVPD 124 (355)
Q Consensus 113 lg~~~~~~~~~~ 124 (355)
+|| .|++.+
T Consensus 166 l~~---di~~~~ 174 (195)
T 2nyi_A 166 FGV---DIDLEE 174 (195)
T ss_dssp HTC---EEEEEE
T ss_pred cCe---EEEEEE
Confidence 997 466643
No 26
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=99.55 E-value=2.9e-14 Score=127.49 Aligned_cols=75 Identities=13% Similarity=0.130 Sum_probs=67.2
Q ss_pred ccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHHHHhhhhhcccee
Q 018502 41 THGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMRSVV 120 (355)
Q Consensus 41 ~~~ILTV~GpDr~GIVA~VS~~La~~g~NIld~~q~id~~~g~F~Mr~~v~~~~~~~~~~~L~~~l~~la~~lg~~~~~~ 120 (355)
++++|||+|+|||||||+||++|+++||||++++|+.. .|.|+|++.|+.+. ...++|+++|.++++++++ .|
T Consensus 5 ~~~~itv~~~DrpGiva~vt~~La~~g~NI~d~~~~~~--~~~f~~~~~v~~~~--~~~~~l~~~L~~~~~~~~~---~~ 77 (192)
T 1u8s_A 5 QHLVITAVGTDRPGICNEVVRLVTQAGCNIIDSRIAMF--GKEFTLLMLISGSP--SNITRVETTLPLLGQQHDL---IT 77 (192)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEE--TTEEEEEEEEEECH--HHHHHHHHHHHHHHHHHTC---EE
T ss_pred cEEEEEEEcCCCCcHHHHHHHHHHHCCCCEEeeeeeec--CCceEEEEEEecCC--CCHHHHHHHHHHHHHhcCC---EE
Confidence 36999999999999999999999999999999999975 89999999998864 2678999999999999987 45
Q ss_pred ee
Q 018502 121 RV 122 (355)
Q Consensus 121 ~~ 122 (355)
++
T Consensus 78 ~~ 79 (192)
T 1u8s_A 78 MM 79 (192)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 27
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7
Probab=99.53 E-value=4.4e-14 Score=111.19 Aligned_cols=74 Identities=24% Similarity=0.169 Sum_probs=68.1
Q ss_pred cccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHHHHhhhhhc
Q 018502 40 LTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAM 116 (355)
Q Consensus 40 ~~~~ILTV~GpDr~GIVA~VS~~La~~g~NIld~~q~id~~~g~F~Mr~~v~~~~~~~~~~~L~~~l~~la~~lg~~ 116 (355)
.++++|++.|+||||++++||+.|+++|+||++++|+.+ .|.|+|++.+++++ ....++|.++|.++++++++.
T Consensus 3 ~~~~~l~v~~~DrpGila~vt~~la~~~~NI~~i~~~~~--~~~~~~~i~v~~~~-~~~l~~l~~~L~~~~~~~~~~ 76 (91)
T 1zpv_A 3 AMKAIITVVGKDKSGIVAGVSGKIAELGLNIDDISQTVL--DEYFTMMAVVSSDE-KQDFTYLRNEFEAFGQTLNVK 76 (91)
T ss_dssp CEEEEEEEEESCCTTHHHHHHHHHHHTTCEEEEEEEEEE--TTEEEEEEEEEESS-CCCHHHHHHHHHHHHHHHTEE
T ss_pred CceEEEEEEECCCCCHHHHHHHHHHHcCCCEEEEEeEEE--cCEEEEEEEEEeCC-CCCHHHHHHHHHHHHHHcCCE
Confidence 467999999999999999999999999999999999976 48999999999986 457899999999999999973
No 28
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=99.52 E-value=2.2e-14 Score=129.40 Aligned_cols=78 Identities=12% Similarity=0.066 Sum_probs=67.8
Q ss_pred CcccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCC----hHHHHHHHHHHHhhhh
Q 018502 39 TLTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWP----REQMDEDFFKLSKMFN 114 (355)
Q Consensus 39 ~~~~~ILTV~GpDr~GIVA~VS~~La~~g~NIld~~q~id~~~g~F~Mr~~v~~~~~~~~----~~~L~~~l~~la~~lg 114 (355)
+.++++|||+|||||||||+||++|+++||||+|++|++. +|.|+|++.|+.+.. + .++|+++|.+++++++
T Consensus 2 ~~~~~~ltv~~~DrpGiva~vs~~La~~g~NI~da~q~~~--~~~f~m~~~v~~~~~--~~~~~~~~l~~~L~~~~~~~~ 77 (195)
T 2nyi_A 2 ETQSFVVSVAGSDRVGIVHDFSWALKNISANVESSRMACL--GGDFAMIVLVSLNAK--DGKLIQSALESALPGFQISTR 77 (195)
T ss_dssp CCEEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEE--TTEEEEEEEEEESSS--SSHHHHHHHHHHSTTCEEEEE
T ss_pred CceEEEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEeEEE--CCeEEEEEEEEecCc--cchhHHHHHHHHHHHHHHhcC
Confidence 3568999999999999999999999999999999999975 899999999997742 3 6899999999998888
Q ss_pred hccceeeeC
Q 018502 115 AMRSVVRVP 123 (355)
Q Consensus 115 ~~~~~~~~~ 123 (355)
| .|++.
T Consensus 78 ~---~~~~~ 83 (195)
T 2nyi_A 78 R---ASSVA 83 (195)
T ss_dssp E---CCCC-
T ss_pred C---eEEEE
Confidence 5 45553
No 29
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=99.43 E-value=5.9e-13 Score=118.98 Aligned_cols=83 Identities=14% Similarity=0.121 Sum_probs=72.1
Q ss_pred CCCcccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccC------CCCeEEEEEEEEeCCCCCChHHHHHHHHHHH
Q 018502 37 SPTLTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPE------KKNVFYSRSEFIFDPIKWPREQMDEDFFKLS 110 (355)
Q Consensus 37 ~~~~~~~ILTV~GpDr~GIVA~VS~~La~~g~NIld~~q~id~------~~g~F~Mr~~v~~~~~~~~~~~L~~~l~~la 110 (355)
.+....++|+|.|+||||||++|+++|+++|+||.++++++++ ..+.|+|+++++.++ ..+.++|+++|.+++
T Consensus 88 ~~~~~~~~l~v~~~D~~Gil~~v~~~l~~~~~nI~~~~~~t~~~~~~~~~~~~F~~~~~~~~~~-~~~~~~l~~~l~~~~ 166 (192)
T 1u8s_A 88 QTHAYTVEVYVESDDKLGLTEKFTQFFAQRQIGMASLSAQTISKDKLHSEQNQFHIAISARVDS-GCNLMQLQEEFDALC 166 (192)
T ss_dssp CCCSEEEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEEEC--------CEEEEEEEEEECT-TSCHHHHHHHHHHHH
T ss_pred ccCCceEEEEEEeCCCccHHHHHHHHHHHcCCcHHHhhhhcccCCccCCCCCEEEEEEEEeCCC-CCCHHHHHHHHHHHH
Confidence 3445779999999999999999999999999999999999765 578999999999885 668999999999999
Q ss_pred hhhhhccceeeeC
Q 018502 111 KMFNAMRSVVRVP 123 (355)
Q Consensus 111 ~~lg~~~~~~~~~ 123 (355)
+++|| +|++.
T Consensus 167 ~~~~~---~~~~~ 176 (192)
T 1u8s_A 167 TALDV---QGSLN 176 (192)
T ss_dssp HHHTC---EEEEE
T ss_pred HHhCc---eEEEE
Confidence 99997 46653
No 30
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=98.24 E-value=3.8e-06 Score=64.50 Aligned_cols=68 Identities=13% Similarity=0.100 Sum_probs=52.2
Q ss_pred ccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHHHHhhhh
Q 018502 41 THGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFN 114 (355)
Q Consensus 41 ~~~ILTV~GpDr~GIVA~VS~~La~~g~NIld~~q~id~~~g~F~Mr~~v~~~~~~~~~~~L~~~l~~la~~lg 114 (355)
..+.|++.++||||++++|++.|+++|+||.++++... .+.+.+.+.++.++ .+.+.+.++++.+--|
T Consensus 4 ~~~~l~v~~~Dr~G~L~~I~~~la~~~inI~~i~~~~~--~~~~~~~i~v~~~~----~~~l~~l~~~L~~~~~ 71 (88)
T 2ko1_A 4 FLAGIRIVGEDKNGMTNQITGVISKFDTNIRTIVLNAK--DGIFTCNLMIFVKN----TDKLTTLMDKLRKVQG 71 (88)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHTTSSSCEEEEEEEEC--SSEEEEEEEEEESS----HHHHHHHHHHHTTCTT
T ss_pred EEEEEEEEEECCCcHHHHHHHHHHHCCCCeEEEEEEEc--CCEEEEEEEEEECC----HHHHHHHHHHHhcCCC
Confidence 45789999999999999999999999999999999754 34666777777763 4566665665544333
No 31
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=97.53 E-value=0.00064 Score=66.52 Aligned_cols=90 Identities=11% Similarity=-0.029 Sum_probs=68.6
Q ss_pred cccEEEEEEcCC-ccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHHHHhhhhhccc
Q 018502 40 LTHGIHVFHCPD-EVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMRS 118 (355)
Q Consensus 40 ~~~~ILTV~GpD-r~GIVA~VS~~La~~g~NIld~~q~id~~~g~F~Mr~~v~~~~~~~~~~~L~~~l~~la~~lg~~~~ 118 (355)
..++++++.|.| ++|+++.|+.+++++|.||.++..... ...|.+-+.+.++. .+.+++++++.+++++++++.
T Consensus 99 ~~~~~~~llg~~~~~~~~~~i~~~l~~~~~Ni~~l~~~~~--~~~~~~~~~v~~~~--~~~~~l~~~l~~l~~~~~vD~- 173 (415)
T 3p96_A 99 PSTHTIFVLGRPITAAAFGAVAREVAALGVNIDLIRGVSD--YPVIGLELRVSVPP--GADEALRTALNRVSSEEHVDV- 173 (415)
T ss_dssp CCSEEEEEEESSCCHHHHHHHHHHHHHTTCEEEEEEEEES--SSSEEEEEEEECCT--TCHHHHHHHHHHHHHHHTCEE-
T ss_pred CCcEEEEEEeCCCCHHHHHHHHHHHHHcCCCccceeeccC--CCceEEEEEeeCCC--CCHHHHHHHHHHHhhhcCcCc-
Confidence 467999999999 999999999999999999999887643 34455545565554 478999999999999998753
Q ss_pred eeeeCC-CCCCceEEEE
Q 018502 119 VVRVPD-IDPKYKVAVL 134 (355)
Q Consensus 119 ~~~~~~-~~~~~riavl 134 (355)
.+.-.. ..+++|.++|
T Consensus 174 ~v~~~~~~~~~~k~viF 190 (415)
T 3p96_A 174 AVEDYTLERRAKRLIVF 190 (415)
T ss_dssp EEEECSTTTTCCCEEEE
T ss_pred ccccccccccCCcEEEE
Confidence 232222 3556777777
No 32
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6
Probab=97.32 E-value=0.00029 Score=62.32 Aligned_cols=67 Identities=19% Similarity=0.204 Sum_probs=49.2
Q ss_pred ccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHHH
Q 018502 41 THGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKL 109 (355)
Q Consensus 41 ~~~ILTV~GpDr~GIVA~VS~~La~~g~NIld~~q~id~~~g~F~Mr~~v~~~~~~~~~~~L~~~l~~l 109 (355)
|++.|++...||||+.+.|++.++++|+||..++.......|...|.+.++.+ ....+++.+++.++
T Consensus 2 ~~~~IsV~v~NrpGvLarIt~lfs~rg~NI~Sl~v~~t~d~~~sriti~V~~d--~~~leqI~kqL~Kl 68 (164)
T 2f1f_A 2 ARRILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLSRMTIQTVGD--EKVLEQIEKQLHKL 68 (164)
T ss_dssp CEEEEEEEEECCTTHHHHHHHHHHTTTCCCSEEEEEECSCSSEEEEEEEEESC--HHHHHHHHHHHHHS
T ss_pred eEEEEEEEEeCCCcHHHHHHHHHHHCCCCeeeceeeecCCCCEEEEEEEEecc--HHHHHHHHHHHcCC
Confidence 68999999999999999999999999999999888643334666677777622 11234444444443
No 33
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=97.17 E-value=0.0056 Score=51.44 Aligned_cols=63 Identities=10% Similarity=0.069 Sum_probs=46.7
Q ss_pred CCcccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHH
Q 018502 38 PTLTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFK 108 (355)
Q Consensus 38 ~~~~~~ILTV~GpDr~GIVA~VS~~La~~g~NIld~~q~id~~~g~F~Mr~~v~~~~~~~~~~~L~~~l~~ 108 (355)
.++|...|+|.-+|+||+.++|++.|+++|+||..+.|......| + .|+.+ . +.+..++.|++
T Consensus 2 ~~m~~~~i~v~v~d~~G~l~~i~~~la~~~inI~~i~~~~~~~~~-~-~~~~~--~----d~~~a~~~L~~ 64 (144)
T 2f06_A 2 NAMVAKQLSIFLENKSGRLTEVTEVLAKENINLSALCIAENADFG-I-LRGIV--S----DPDKAYKALKD 64 (144)
T ss_dssp CSSEEEEEEEEECSSSSHHHHHHHHHHHTTCCEEEEEEEECSSCE-E-EEEEE--S----CHHHHHHHHHH
T ss_pred CccEEEEEEEEecCCCcHHHHHHHHHHHCCCCEEEEEEEecCCCC-E-EEEEe--C----CHHHHHHHHHH
Confidence 345889999999999999999999999999999999886322113 1 34432 2 45666666664
No 34
>2re1_A Aspartokinase, alpha and beta subunits; structural genomics, protein structure initiative, midwest center for structural genomics; 2.75A {Neisseria meningitidis MC58}
Probab=97.13 E-value=0.0011 Score=57.72 Aligned_cols=103 Identities=12% Similarity=-0.003 Sum_probs=66.8
Q ss_pred ccEEEEEEc-CCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHHHHhhhhhccce
Q 018502 41 THGIHVFHC-PDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMRSV 119 (355)
Q Consensus 41 ~~~ILTV~G-pDr~GIVA~VS~~La~~g~NIld~~q~id~~~g~F~Mr~~v~~~~~~~~~~~L~~~l~~la~~lg~~~~~ 119 (355)
+-..|++.| +|++|+.++|.+.|+++|+||.-++|.... +|.+.+++.++-+ +.+...+.|+++.++++..
T Consensus 24 ~~~~i~v~~~~~~~G~~~~if~~La~~~Invd~i~~s~~~-~g~~~isf~v~~~----~~~~a~~~l~~~~~~l~~~--- 95 (167)
T 2re1_A 24 NQARINVRGVPDKPGVAYQILGAVADANIEVDMIIQNVGS-EGTTDFSFTVPRG----DYKQTLEILSERQDSIGAA--- 95 (167)
T ss_dssp CCEEEEEEEEECCTTHHHHHHHHHHTTTCCCCCEEEC-----CEEEEEEEECGG----GHHHHHHHHHHSSTTTTCS---
T ss_pred CEEEEEEecCCCCcCHHHHHHHHHHHcCCeEEEEEcCCCC-CCeeEEEEEEech----HHHHHHHHHHHHHHHcCCc---
Confidence 557889997 999999999999999999999999987533 3666666666432 3456677777776676642
Q ss_pred eeeCCCCCCceEEEEEeCCc---hhHHHHHhhhhcC
Q 018502 120 VRVPDIDPKYKVAVLASKQE---HCLVDFLYGWQEG 152 (355)
Q Consensus 120 ~~~~~~~~~~riavl~S~~g---~~L~~ll~~~~~~ 152 (355)
.+.-.+...+|.+.+.+-. .-+..++..+.+.
T Consensus 96 -~i~~~~~~a~vsvvG~~m~~~~Gv~a~i~~aL~~~ 130 (167)
T 2re1_A 96 -SIDGDDTVCKVSAVGLGMRSHVGVAAKIFRTLAEE 130 (167)
T ss_dssp -EEEEESSEEEEEEECSSCTTCCCHHHHHHHHHHHT
T ss_pred -eEEecCCEEEEEEECCCcCCCcCHHHHHHHHHHHC
Confidence 1222234566777766521 2344444444333
No 35
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=97.08 E-value=0.00087 Score=62.01 Aligned_cols=89 Identities=17% Similarity=0.190 Sum_probs=57.9
Q ss_pred ccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCC---CCeEEEEEEEEeCCCCCChHHHHHHHHHHHhhhhhcc
Q 018502 41 THGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEK---KNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMR 117 (355)
Q Consensus 41 ~~~ILTV~GpDr~GIVA~VS~~La~~g~NIld~~q~id~~---~g~F~Mr~~v~~~~~~~~~~~L~~~l~~la~~lg~~~ 117 (355)
|.+-|.+.+.||+|+.+.|++.|+++++||..++|+.+.. +|...|. +++++. ..+++-+.++.+-.=+.+
T Consensus 3 ~~VtL~I~a~DRpGLLsDIt~vLAe~kiNIltIn~~~~~kG~~ng~A~I~--IEV~d~--~Le~LL~kLrkI~gV~~V-- 76 (223)
T 1y7p_A 3 MLRGLRIIAENKIGVLRDLTTIIAEEGGNITFAQTFLIKHGEHEGKALIY--FEIEGG--DFEKILERVKTFDYIIEI-- 76 (223)
T ss_dssp -CEEEEEEEECCTTHHHHHHHHCC----CEEEEEEEECCSSTTTTEEEEE--EEECSS--CHHHHHHHHHTCTTEEEE--
T ss_pred ceEEEEEEEcCCCCHHHHHHHHHHHcCCCceEEEEEccccCCcCCEEEEE--EEECCC--CHHHHHHHHhCCCCeeEE--
Confidence 5678899999999999999999999999999999997531 3566666 666653 667777777665432222
Q ss_pred ceeeeCCCC--CCceEEEEEeC
Q 018502 118 SVVRVPDID--PKYKVAVLASK 137 (355)
Q Consensus 118 ~~~~~~~~~--~~~riavl~S~ 137 (355)
.++..-+ --+||-+++.|
T Consensus 77 --~Rv~~~~~i~gkrvii~ggg 96 (223)
T 1y7p_A 77 --EEEESFERVFGKRVIILGGG 96 (223)
T ss_dssp --EEECCHHHHTCEEEEEEECH
T ss_pred --EEEcchhhhcCcEEEEECCc
Confidence 2221111 13788888743
No 36
>2fgc_A Acetolactate synthase, small subunit; regulatory subunit, structural genomi protein structure initiative; 2.30A {Thermotoga maritima} SCOP: d.58.18.6 d.58.18.6
Probab=97.08 E-value=0.0013 Score=59.72 Aligned_cols=73 Identities=19% Similarity=0.178 Sum_probs=53.3
Q ss_pred CCCCcccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHHHH
Q 018502 36 VSPTLTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLS 110 (355)
Q Consensus 36 ~~~~~~~~ILTV~GpDr~GIVA~VS~~La~~g~NIld~~q~id~~~g~F~Mr~~v~~~~~~~~~~~L~~~l~~la 110 (355)
|+...|+..|++.-.|+||..++|++.++++|+||..+........|.--|.+.++.++ ...+++.+++.++-
T Consensus 23 m~~~~m~~~LsVlVeN~pGvLaRItglfsrRG~NI~SLtV~~ted~gisRitIvV~g~e--~~ieqL~kQL~KLi 95 (193)
T 2fgc_A 23 MTDQIREHLVSMLVHNKPGVMRKVANLFARRGFNISSITVGESETPGLSRLVIMVKGDD--KTIEQIEKQAYKLV 95 (193)
T ss_dssp ----CEEEEEEEEEECCTTHHHHHHHHHHTTTCEEEEEEEEECSSTTEEEEEEEEEECT--THHHHHHHHHTTST
T ss_pred CCccceEEEEEEEECCCChHHHHHHHHHHHCCceEEEEEeeccCCCCEEEEEEEEECCH--HHHHHHHHHhcCcC
Confidence 33335789999999999999999999999999999998876433356666666666443 24677777776553
No 37
>2pc6_A Probable acetolactate synthase isozyme III (small; regulatory subunit, structural genomi protein structure initiative; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6
Probab=97.04 E-value=0.00089 Score=59.28 Aligned_cols=68 Identities=19% Similarity=0.108 Sum_probs=50.4
Q ss_pred cccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHHH
Q 018502 40 LTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKL 109 (355)
Q Consensus 40 ~~~~ILTV~GpDr~GIVA~VS~~La~~g~NIld~~q~id~~~g~F~Mr~~v~~~~~~~~~~~L~~~l~~l 109 (355)
.|++.|++...||||..+.|++.++++|+||..++.......|.-.|.+.++.++ ...+++.+++.++
T Consensus 2 ~m~~~IsV~veNrpGvL~rI~~lfs~rg~NI~Sl~v~~t~d~g~sritivV~~d~--~~leql~kQL~Kl 69 (165)
T 2pc6_A 2 HMRHIISLLMENEAGALSRVAGLFSARGYNIESLSVAPTEDPTLSRMTLVTNGPD--EIVEQITKQLNKL 69 (165)
T ss_dssp CEEEEEEEEEECSTTHHHHHHHHHHHHTCCCCEEEEEECSSTTEEEEEEEEEECH--HHHHHHHHHHHHS
T ss_pred ceEEEEEEEEeCCCcHHHHHHHHHHHCCCcEEEEEEEecCCCCEEEEEEEEeccH--HHHHHHHHHhcCC
Confidence 3689999999999999999999999999999998876433356666766676331 1345555555544
No 38
>2dt9_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; 2.15A {Thermus thermophilus} PDB: 2zho_A
Probab=96.76 E-value=0.011 Score=51.26 Aligned_cols=103 Identities=16% Similarity=0.052 Sum_probs=71.3
Q ss_pred ccEEEEEEc-CCccchHHHHHHHHHhcCCeEeEeeeeccC-CCCeEEEEEEEEeCCCCCChHHHHHHHHHHHhhhhhccc
Q 018502 41 THGIHVFHC-PDEVGIVAKLSECIASRGGNILAADVFVPE-KKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMRS 118 (355)
Q Consensus 41 ~~~ILTV~G-pDr~GIVA~VS~~La~~g~NIld~~q~id~-~~g~F~Mr~~v~~~~~~~~~~~L~~~l~~la~~lg~~~~ 118 (355)
+-..+++.| +|++|+.++|.+.|+++|+||.-++|.... ..|...+.+.++-+ +.+...+.|+++.++++.
T Consensus 15 ~~a~Itv~g~~~~~G~~a~if~~La~~~InVd~I~q~~~~~~~g~~~isf~V~~~----d~~~a~~~L~~~~~~~~~--- 87 (167)
T 2dt9_A 15 DHAQIGLIGIPDQPGIAAKVFQALAERGIAVDMIIQGVPGHDPSRQQMAFTVKKD----FAQEALEALEPVLAEIGG--- 87 (167)
T ss_dssp SEEEEEEEEEECSTTHHHHHHHHHHHHTCCCSCEEBCCCCSCTTEEEEEEEEEGG----GHHHHHHHHHHHHHHHCC---
T ss_pred CEEEEEEecCCCCCCHHHHHHHHHHHcCCcEEEEEcCCCCCCCCceEEEEEEehH----HHHHHHHHHHHHHHHhCC---
Confidence 557889988 899999999999999999999999996421 23555555655432 356667788887777774
Q ss_pred eeeeCCCCCCceEEEEEeCCc---hhHHHHHhhhhcC
Q 018502 119 VVRVPDIDPKYKVAVLASKQE---HCLVDFLYGWQEG 152 (355)
Q Consensus 119 ~~~~~~~~~~~riavl~S~~g---~~L~~ll~~~~~~ 152 (355)
..++ .+..-+|.+.+.+-. ..+..++..+.+.
T Consensus 88 ~v~~--~~~~a~vsvVG~gm~~~~Gv~a~~f~aL~~~ 122 (167)
T 2dt9_A 88 EAIL--RPDIAKVSIVGVGLASTPEVPAKMFQAVAST 122 (167)
T ss_dssp EEEE--ECSEEEEEEEESSGGGSTHHHHHHHHHHHHT
T ss_pred cEEE--eCCEEEEEEECCCcccCcCHHHHHHHHHHHC
Confidence 2333 345678999987742 2344455554443
No 39
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=96.44 E-value=0.006 Score=62.46 Aligned_cols=75 Identities=16% Similarity=0.137 Sum_probs=55.7
Q ss_pred CCCccccCCCCCCcccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHH
Q 018502 27 FPGEPIESSVSPTLTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDF 106 (355)
Q Consensus 27 ~~~~~~~~~~~~~~~~~ILTV~GpDr~GIVA~VS~~La~~g~NIld~~q~id~~~g~F~Mr~~v~~~~~~~~~~~L~~~l 106 (355)
..|-+++++. ..+.|.+.-+|+||+|++|++.|.++|+||.+++-.-...+|.=.|++.++-+- + +++.+++
T Consensus 443 i~g~~v~~~~----~~~~l~v~~~D~PG~I~~v~~~Lg~~~INIa~m~v~r~~~~~~a~~~i~vd~~~---~-~~~l~~l 514 (529)
T 1ygy_A 443 INGRHFDLRA----QGINLIIHYVDRPGALGKIGTLLGTAGVNIQAAQLSEDAEGPGATILLRLDQDV---P-DDVRTAI 514 (529)
T ss_dssp ETTEEEEEES----CSEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEECSSSSCEEEEEEESSCC---C-HHHHHHH
T ss_pred ECCEEEEecC----CccEEEEEcCCCCchHHHHHHHHHhcCCCeeeEEEecCCCCCEEEEEEEECCCC---C-HHHHHHH
Confidence 4455555555 567788888999999999999999999999998776555567777788776543 3 4555555
Q ss_pred HHH
Q 018502 107 FKL 109 (355)
Q Consensus 107 ~~l 109 (355)
.++
T Consensus 515 ~~~ 517 (529)
T 1ygy_A 515 AAA 517 (529)
T ss_dssp HHH
T ss_pred hcC
Confidence 554
No 40
>4go7_X Aspartokinase; transferase; 2.00A {Mycobacterium tuberculosis} PDB: 4go5_X
Probab=96.00 E-value=0.04 Score=49.93 Aligned_cols=107 Identities=15% Similarity=0.005 Sum_probs=72.7
Q ss_pred CcccEEEEEEc-CCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHHHHhhhhhcc
Q 018502 39 TLTHGIHVFHC-PDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMR 117 (355)
Q Consensus 39 ~~~~~ILTV~G-pDr~GIVA~VS~~La~~g~NIld~~q~id~~~g~F~Mr~~v~~~~~~~~~~~L~~~l~~la~~lg~~~ 117 (355)
..+.+.+|+.| ||+||+.++|-+.|+++|+||-=+.|.....+ .....+.|.++.. +.+...+.++++..+++..
T Consensus 32 ~~~~a~Iti~g~~~~pG~aa~IF~~La~~~InVDmI~Qs~s~~~-~~~~~~sftv~~~--d~~~~~~~l~~~~~~~~~~- 107 (200)
T 4go7_X 32 DRSEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVE-DGKTDITFTCSRD--VGPAAVEKLDSLRNEIGFS- 107 (200)
T ss_dssp ECSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCCEECCCCC---CCEEEEEEEEEGG--GHHHHHHHHHTTHHHHCCS-
T ss_pred cCCEEEEEEecCCCCccHHHHHHHHHHHhCcceEEEeecccccc-ccceEEEEecchh--hHHHHHHHHHHHHhhhcee-
Confidence 33557788876 99999999999999999999999999754222 2334666666643 5667777888888877653
Q ss_pred ceeeeCCCCCCceEEEEEeCCch---hHHHHHhhhhcC
Q 018502 118 SVVRVPDIDPKYKVAVLASKQEH---CLVDFLYGWQEG 152 (355)
Q Consensus 118 ~~~~~~~~~~~~riavl~S~~g~---~L~~ll~~~~~~ 152 (355)
++.-.+.--||.+.+.|.-+ -...+...+.+.
T Consensus 108 ---~v~~~~~iakVSvVG~GM~~~~GVaak~F~aLa~~ 142 (200)
T 4go7_X 108 ---QLLYDDHIGKVSLIGAGMRSHPGVTATFCEALAAV 142 (200)
T ss_dssp ---EEEEECCEEEEEEEEESCTTCHHHHHHHHHHHHHT
T ss_pred ---eEEEecCeeeeeeeccccccCCCcHHHHHHHHHHC
Confidence 22223456789999987753 233344544433
No 41
>2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli}
Probab=95.81 E-value=0.039 Score=46.45 Aligned_cols=34 Identities=18% Similarity=0.339 Sum_probs=31.4
Q ss_pred EEEEEcCCccchHHHHHHHHHhcCCeEeEeeeec
Q 018502 44 IHVFHCPDEVGIVAKLSECIASRGGNILAADVFV 77 (355)
Q Consensus 44 ILTV~GpDr~GIVA~VS~~La~~g~NIld~~q~i 77 (355)
-|.|.|.||+|+++.|++.|+++++||..++...
T Consensus 2 ~~~v~~~dr~g~l~~i~~~l~~~~~ni~~~~~~~ 35 (190)
T 2jhe_A 2 RLEVFCEDRLGLTRELLDLLVLRGIDLRGIEIDP 35 (190)
T ss_dssp EEEEEECSCTTHHHHHHHHHHHTTCCEEEEEEET
T ss_pred EEEEEEecCCcHHHHHHHHHHHcCCCeEEEEEec
Confidence 3689999999999999999999999999999963
No 42
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=95.73 E-value=0.035 Score=55.15 Aligned_cols=76 Identities=16% Similarity=0.263 Sum_probs=51.7
Q ss_pred hhhhhhhccc--cccccCCCCccccCCCCCCcccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEE
Q 018502 11 LQQVVKFTNR--SFKSLKFPGEPIESSVSPTLTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRS 88 (355)
Q Consensus 11 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ILTV~GpDr~GIVA~VS~~La~~g~NIld~~q~id~~~g~F~Mr~ 88 (355)
.+++..|.+. .-.+..||... ++.. +...|.+.-.|+||++++|++.|+++|+||....-.. .+|.=.|++
T Consensus 303 ~~nl~~~l~g~~~~~~vn~p~~~----~~~~-~~~rl~~~h~d~PGvi~~i~~iL~~~~iNIa~m~~~r--~g~~A~~vi 375 (404)
T 1sc6_A 303 AGKLIKYSDNGSTLSAVNFPEVS----LPLH-GGRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQT--SAQMGYVVI 375 (404)
T ss_dssp HHHHHHHHHHCCCTTBSSSCCCC----CCCC-SSEEEEEEEESCTTHHHHHHHHHHHTTCEEEEEEEEE--CSSEEEEEE
T ss_pred HHHHHHHHcCCCCcceecccccc----cCcC-CcceEEEEeCCCCCHHHHHHHHHHHcCCCHHHhhccC--CCCEEEEEE
Confidence 4555555432 23345566433 3222 4556788889999999999999999999999977664 356666677
Q ss_pred EEEeC
Q 018502 89 EFIFD 93 (355)
Q Consensus 89 ~v~~~ 93 (355)
.+|-+
T Consensus 376 dvD~~ 380 (404)
T 1sc6_A 376 DIEAD 380 (404)
T ss_dssp EEECC
T ss_pred EcCCC
Confidence 66643
No 43
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=95.62 E-value=0.03 Score=46.88 Aligned_cols=57 Identities=19% Similarity=0.175 Sum_probs=39.8
Q ss_pred EEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHH
Q 018502 44 IHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFK 108 (355)
Q Consensus 44 ILTV~GpDr~GIVA~VS~~La~~g~NIld~~q~id~~~g~F~Mr~~v~~~~~~~~~~~L~~~l~~ 108 (355)
++.+--+|+||+.|++++.|+++|+||..+-.+. ..+.-.+.+.+ + +.+...+.|.+
T Consensus 74 vv~v~~~d~pGvla~i~~~L~~~~InI~~~~~~~--~~~~~~~~i~~--~----d~~~A~~~L~~ 130 (144)
T 2f06_A 74 VVGISCPNVPGALAKVLGFLSAEGVFIEYMYSFA--NNNVANVVIRP--S----NMDKCIEVLKE 130 (144)
T ss_dssp EEEEEEESSTTHHHHHHHHHHHTTCCEEEEEEEE--ETTEEEEEEEE--S----CHHHHHHHHHH
T ss_pred EEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEEEc--cCCcEEEEEEe--C----CHHHHHHHHHH
Confidence 5677779999999999999999999998766652 23444444433 2 34555555554
No 44
>3s1t_A Aspartokinase; ACT domain, threonine binding, regulatory domain of aspartok transferase; 1.63A {Mycobacterium tuberculosis}
Probab=95.20 E-value=0.2 Score=44.25 Aligned_cols=104 Identities=14% Similarity=-0.006 Sum_probs=68.1
Q ss_pred ccEEEEEEc-CCccchHHHHHHHHHhcCCeEeEeeeeccC-CCCeEEEEEEEEeCCCCCChHHHHHHHHHHHhhhhhccc
Q 018502 41 THGIHVFHC-PDEVGIVAKLSECIASRGGNILAADVFVPE-KKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMRS 118 (355)
Q Consensus 41 ~~~ILTV~G-pDr~GIVA~VS~~La~~g~NIld~~q~id~-~~g~F~Mr~~v~~~~~~~~~~~L~~~l~~la~~lg~~~~ 118 (355)
+-..+|+.| +|++|+.++|-+.|+++|+||.-+.|.... ..|.-.+.+.+ +.. +.+...+.|+++.++++..
T Consensus 15 ~~~~Iti~~~~~~~G~~a~If~~La~~~I~vd~I~q~~s~~~~g~~~isftv--~~~--~~~~a~~~L~~~~~el~~~-- 88 (181)
T 3s1t_A 15 SEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTC--SRD--VGPAAVEKLDSLRNEIGFS-- 88 (181)
T ss_dssp SEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCCEEECCCCTTTCEEEEEEEE--ETT--THHHHHHHHHHTHHHHCCS--
T ss_pred CEEEEEEecCCCCcCHHHHHHHHHHHcCCcEEEEEecCCcccCCccEEEEEE--ehh--HHHHHHHHHHHHHHhcCcc--
Confidence 445666654 799999999999999999999999986532 14544444444 332 4567777888887777642
Q ss_pred eeeeCCCCCCceEEEEEeCCch---hHHHHHhhhhcC
Q 018502 119 VVRVPDIDPKYKVAVLASKQEH---CLVDFLYGWQEG 152 (355)
Q Consensus 119 ~~~~~~~~~~~riavl~S~~g~---~L~~ll~~~~~~ 152 (355)
..++ .+.--+|++.+.|-.. .+..+...+.+.
T Consensus 89 ~v~~--~~~va~VsvVG~gm~~~~Gvaa~~f~aLa~~ 123 (181)
T 3s1t_A 89 QLLY--DDHIGKVSLIGAGMRSHPGVTATFCEALAAV 123 (181)
T ss_dssp EEEE--ESCEEEEEEEEECCTTCHHHHHHHHHHHHHT
T ss_pred eEEE--eCCEEEEEEEecccccCchHHHHHHHHHHHC
Confidence 2222 3456789999887632 234455554433
No 45
>2dtj_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; HET: CIT; 1.58A {Corynebacterium glutamicum} PDB: 3aaw_B* 3ab2_B 3ab4_B*
Probab=94.19 E-value=0.31 Score=42.58 Aligned_cols=105 Identities=17% Similarity=0.054 Sum_probs=66.1
Q ss_pred ccEEEEEE-cCCccchHHHHHHHHHhcCCeEeEeeeeccC-CCC--eEEEEEEEEeCCCCCChHHHHHHHHHHHhhhhhc
Q 018502 41 THGIHVFH-CPDEVGIVAKLSECIASRGGNILAADVFVPE-KKN--VFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAM 116 (355)
Q Consensus 41 ~~~ILTV~-GpDr~GIVA~VS~~La~~g~NIld~~q~id~-~~g--~F~Mr~~v~~~~~~~~~~~L~~~l~~la~~lg~~ 116 (355)
+-..|++. .+|++|+.++|.+.|+++|+||.-+.|.... .+| .|. |.++.. +.+...+.|+++.++++..
T Consensus 14 ~~~~Itv~~~~~~~G~~a~if~~La~~~InId~i~~s~~~~~~~~~~is----f~v~~~--d~~~a~~~l~~~~~~~~~~ 87 (178)
T 2dtj_A 14 SEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVSSVEDGTTDIT----FTCPRS--DGRRAMEILKKLQVQGNWT 87 (178)
T ss_dssp SEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCEEEECCCCTTTCEEEEE----EEEEHH--HHHHHHHHHHTTTTTTTCS
T ss_pred CEEEEEEecCCCCccHHHHHHHHHHHcCCCEEEEEcCCCCCCCCceEEE----EEEccc--cHHHHHHHHHHHHHhcCCC
Confidence 44677774 5999999999999999999999999886421 122 233 333221 3455567777766666642
Q ss_pred cceeeeCCCCCCceEEEEEeCCch---hHHHHHhhhhcCCCC
Q 018502 117 RSVVRVPDIDPKYKVAVLASKQEH---CLVDFLYGWQEGKLP 155 (355)
Q Consensus 117 ~~~~~~~~~~~~~riavl~S~~g~---~L~~ll~~~~~~~l~ 155 (355)
.+ ...+..-+|.+.+++... -+..++..+.+...+
T Consensus 88 --~v--~~~~~~a~VsvVG~gm~~~~Gv~arif~aLa~~~In 125 (178)
T 2dtj_A 88 --NV--LYDDQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVN 125 (178)
T ss_dssp --EE--EEESCEEEEEEEEECCTTCHHHHHHHHHHHHHTTCC
T ss_pred --eE--EEeCCeEEEEEEcCCcccCccHHHHHHHHHHHCCCC
Confidence 12 223466788999887642 244555555444333
No 46
>2re1_A Aspartokinase, alpha and beta subunits; structural genomics, protein structure initiative, midwest center for structural genomics; 2.75A {Neisseria meningitidis MC58}
Probab=93.12 E-value=0.23 Score=42.85 Aligned_cols=62 Identities=23% Similarity=0.085 Sum_probs=46.3
Q ss_pred ccEEEEEEcCC---ccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHHHHhhhhh
Q 018502 41 THGIHVFHCPD---EVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNA 115 (355)
Q Consensus 41 ~~~ILTV~GpD---r~GIVA~VS~~La~~g~NIld~~q~id~~~g~F~Mr~~v~~~~~~~~~~~L~~~l~~la~~lg~ 115 (355)
.-++++|+|.+ +||+.+++.+.|+++|+||..++.. .. .+.+.++ .++..++++.+-++|++
T Consensus 102 ~~a~vsvvG~~m~~~~Gv~a~i~~aL~~~~InI~~ists----e~--~is~vv~-------~~d~~~av~~Lh~~f~l 166 (167)
T 2re1_A 102 TVCKVSAVGLGMRSHVGVAAKIFRTLAEEGINIQMISTS----EI--KVSVLID-------EKYMELATRVLHKAFNL 166 (167)
T ss_dssp SEEEEEEECSSCTTCCCHHHHHHHHHHHTTCCCCEEEEC----SS--EEEEEEE-------GGGHHHHHHHHHHHTTC
T ss_pred CEEEEEEECCCcCCCcCHHHHHHHHHHHCCCcEEEEEcc----cC--EEEEEEe-------HHHHHHHHHHHHHHhcC
Confidence 56899999998 9999999999999999999987632 12 2223332 24567788888777754
No 47
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=92.73 E-value=0.86 Score=43.76 Aligned_cols=119 Identities=15% Similarity=0.233 Sum_probs=64.8
Q ss_pred CceEEEEEeCCchhHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHH----HHHHHCCCCeEEeCCCCChhHHHHHHHhc
Q 018502 128 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVI----RFLERHGIPYHYLCAKENEREEELLELVQ 203 (355)
Q Consensus 128 ~~riavl~S~~g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~----~~a~~~gIP~~~~~~~~~~~~~~~~~~l~ 203 (355)
..||++++-+.......++..+. .+++++.. ++...-.++..+. +.|++.|..+.... ++.+.++
T Consensus 148 gl~va~vGD~~~rva~Sl~~~~~--~~g~~v~~-~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~--------d~~eav~ 216 (307)
T 2i6u_A 148 GLRLSYFGDGANNMAHSLLLGGV--TAGIHVTV-AAPEGFLPDPSVRAAAERRAQDTGASVTVTA--------DAHAAAA 216 (307)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHH--HTTCEEEE-ECCTTSCCCHHHHHHHHHHHHHHTCCEEEES--------CHHHHHT
T ss_pred CeEEEEECCCCcCcHHHHHHHHH--HCCCEEEE-ECCccccCCHHHHHHHHHHHHHcCCeEEEEE--------CHHHHhc
Confidence 35777766541222233443321 23456542 3322211222233 34447776665543 1334566
Q ss_pred CCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChHHHhhcCCCeEEecCCCCCCCCC
Q 018502 204 NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKG 272 (355)
Q Consensus 204 ~~Dlivla~y~~~~~~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~~l~~~~~~~INiHpslLP~yrG 272 (355)
++|++.+-+|.+ ..+..++.-..-..-+|.+.+++++..+..++=+|| ||++||
T Consensus 217 ~aDvvy~~~w~s-------------mg~~~~~~~~~~~~~~y~v~~~~l~~a~~~ai~mH~--lP~~Rg 270 (307)
T 2i6u_A 217 GADVLVTDTWTS-------------MGQENDGLDRVKPFRPFQLNSRLLALADSDAIVLHC--LPAHRG 270 (307)
T ss_dssp TCSEEEECCSSC-------------TTCTTSCCCSSGGGGGGCBCHHHHHHSCTTCEEEEC--SCCCBT
T ss_pred CCCEEEecceec-------------CCcccchHHHHHHHhhcCCCHHHHhhcCCCcEEECC--CCCCCC
Confidence 899999888843 011111111112223578999999998889999998 599987
No 48
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=92.27 E-value=0.07 Score=52.27 Aligned_cols=56 Identities=18% Similarity=0.361 Sum_probs=35.7
Q ss_pred CCCCCCceEEEEEeCCchhHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCeE
Q 018502 123 PDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYH 185 (355)
Q Consensus 123 ~~~~~~~riavl~S~~g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~ 185 (355)
+...+|.||+|+++|.|.. -+..++.-.-.+++++|++... ....++|+++|||++
T Consensus 2 ~~~~~~~rv~VvG~G~g~~---h~~a~~~~~~~~elvav~~~~~----~~a~~~a~~~gv~~~ 57 (372)
T 4gmf_A 2 PSASPKQRVLIVGAKFGEM---YLNAFMQPPEGLELVGLLAQGS----ARSRELAHAFGIPLY 57 (372)
T ss_dssp -----CEEEEEECSTTTHH---HHHTTSSCCTTEEEEEEECCSS----HHHHHHHHHTTCCEE
T ss_pred CCCCCCCEEEEEehHHHHH---HHHHHHhCCCCeEEEEEECCCH----HHHHHHHHHhCCCEE
Confidence 3456889999999987642 2333332211489999887542 357889999999964
No 49
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=92.11 E-value=0.24 Score=49.51 Aligned_cols=75 Identities=15% Similarity=0.169 Sum_probs=50.9
Q ss_pred hhhhhhhc-c-ccccccCCCCccccCCCCCCcccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEE
Q 018502 11 LQQVVKFT-N-RSFKSLKFPGEPIESSVSPTLTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRS 88 (355)
Q Consensus 11 ~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~ILTV~GpDr~GIVA~VS~~La~~g~NIld~~q~id~~~g~F~Mr~ 88 (355)
.+++..|. + ..-.+..||. .+|+.......|+++=.++||++++|++.|+++|+||.+..-.. .|.+. -+
T Consensus 314 ~~nl~~~l~~g~~~~~Vn~p~----~~~~~~~~~~r~~~~h~n~p~~~~~i~~~~~~~~~ni~~~~~~~---~~~~~-y~ 385 (416)
T 3k5p_A 314 TRKLVEYSDVGSTVGAVNFPQ----VQLPPRPTGTRFMHVHENRPGILNSLMNVFSHHHINIASQFLQT---DGEVG-YL 385 (416)
T ss_dssp HHHHHHHHHHCCCTTBSSSCC----CCCCCCSSSEEEEEEECCCTTHHHHHHHHHHHTTCCEEEEEEEE---CSSCE-EE
T ss_pred HHHHHHHHhhCCCCceeeCCC----cCCCCCCCceEEEEEecCCccHHHHHHHHHHHcCCCHHHHhccC---CCceE-EE
Confidence 45555654 2 2234566653 35655556788999999999999999999999999999955432 23333 33
Q ss_pred EEEeC
Q 018502 89 EFIFD 93 (355)
Q Consensus 89 ~v~~~ 93 (355)
.+|++
T Consensus 386 ~~d~~ 390 (416)
T 3k5p_A 386 VMEAD 390 (416)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 45555
No 50
>2dtj_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; HET: CIT; 1.58A {Corynebacterium glutamicum} PDB: 3aaw_B* 3ab2_B 3ab4_B*
Probab=91.84 E-value=0.3 Score=42.65 Aligned_cols=63 Identities=14% Similarity=0.128 Sum_probs=48.1
Q ss_pred cccEEEEEEcC---CccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHHHHhhhhh
Q 018502 40 LTHGIHVFHCP---DEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNA 115 (355)
Q Consensus 40 ~~~~ILTV~Gp---Dr~GIVA~VS~~La~~g~NIld~~q~id~~~g~F~Mr~~v~~~~~~~~~~~L~~~l~~la~~lg~ 115 (355)
.+-++++++|. ++||+.+++.+.|+++|+||.-++.. .... .+.+ +.++..++++.+-+.|.+
T Consensus 93 ~~~a~VsvVG~gm~~~~Gv~arif~aLa~~~InI~~istS---e~~I---s~vV-------~~~d~~~Av~~Lh~~F~l 158 (178)
T 2dtj_A 93 DQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIELISTS---EIRI---SVLI-------REDDLDAAARALHEQFQL 158 (178)
T ss_dssp SCEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCEEEEE---TTEE---EEEE-------EGGGHHHHHHHHHHHHTC
T ss_pred CCeEEEEEEcCCcccCccHHHHHHHHHHHCCCCEEEEEcC---CCeE---EEEE-------eHHHHHHHHHHHHHHHcc
Confidence 36689999998 89999999999999999999887632 1221 2222 246688888888888875
No 51
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=90.62 E-value=0.61 Score=46.95 Aligned_cols=71 Identities=13% Similarity=0.051 Sum_probs=49.2
Q ss_pred CCcccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHHHHh
Q 018502 38 PTLTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSK 111 (355)
Q Consensus 38 ~~~~~~ILTV~GpDr~GIVA~VS~~La~~g~NIld~~q~id~~~g~F~Mr~~v~~~~~~~~~~~L~~~l~~la~ 111 (355)
....+|-+.+...|+||+.++|++.++++|++|..+-|......+.- ..+.+-.. .....+++++++++.+
T Consensus 355 ~~~~~yy~r~~~~d~~gvl~~i~~~~~~~~isi~~~~q~~~~~~~~~-~~~v~~th--~~~e~~~~~~~~~~~~ 425 (444)
T 3mtj_A 355 AVRTAYYLRLRAFDRPGVLADITRILADSSISIDAMVQKEPAEGEEQ-VDIILLTH--VTLEKNVNAAIAKIEA 425 (444)
T ss_dssp GCEEEEEEEEEEC-CCHHHHHHHHHHHHTTCCEEEEEECC------C-EEEEEEEC--SEEHHHHHHHHHHHTT
T ss_pred HcceeeEEEEEecCcccHHHHHHHHHHhcCCceeEEeecccccCCCC-ceEEEEec--cCCHHHHHHHHHHHhc
Confidence 34477999999999999999999999999999999999632101111 23333222 2356888888888754
No 52
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=90.59 E-value=1.5 Score=43.34 Aligned_cols=105 Identities=16% Similarity=-0.012 Sum_probs=66.3
Q ss_pred EEEEEEc-CCccchHHHHHHHHHhcCCeEeEeeeeccC-CCCeEEEEEEEEeCCCCCChHHHHHHHHHHHhhhhhcccee
Q 018502 43 GIHVFHC-PDEVGIVAKLSECIASRGGNILAADVFVPE-KKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMRSVV 120 (355)
Q Consensus 43 ~ILTV~G-pDr~GIVA~VS~~La~~g~NIld~~q~id~-~~g~F~Mr~~v~~~~~~~~~~~L~~~l~~la~~lg~~~~~~ 120 (355)
..|++.| +|++|+.++|-+.|+++|+||.-++|.... ..|...+.+.++-+ +.+...+.++++.++++.. ..
T Consensus 265 ~~i~v~~~~~~~g~~~~If~~La~~~I~vd~I~q~~s~~~~g~~~isf~v~~~----~~~~a~~~l~~~~~~~~~~--~v 338 (421)
T 3ab4_A 265 AKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVFSVEDGTTDITFTCPRS----DGRRAMEILKKLQVQGNWT--NV 338 (421)
T ss_dssp EEEEEEEEESSTTHHHHHHHHHHHTTCCCEEEEECCCC--CCEEEEEEEEETT----THHHHHHHHHHHHTTTTCS--EE
T ss_pred EEEEEeccCCcccHHHHHHHHHHHcCCcEEEEEccCccccCCcceEEEEEech----hHHHHHHHHHHHHHHcCCc--eE
Confidence 5677774 899999999999999999999999884210 13444555555432 4566677888877777642 22
Q ss_pred eeCCCCCCceEEEEEeCCc---hhHHHHHhhhhcCCCC
Q 018502 121 RVPDIDPKYKVAVLASKQE---HCLVDFLYGWQEGKLP 155 (355)
Q Consensus 121 ~~~~~~~~~riavl~S~~g---~~L~~ll~~~~~~~l~ 155 (355)
++ .+..-+|.+.+.+-. ..+..++..+.+...+
T Consensus 339 ~~--~~~~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~In 374 (421)
T 3ab4_A 339 LY--DDQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVN 374 (421)
T ss_dssp EE--ECCEEEEEEECGGGTSCTTHHHHHHHHHHHTTCC
T ss_pred EE--eCCeEEEEEEccCcccCccHHHHHHHHHHHCCCC
Confidence 22 345567888876542 1234455544443333
No 53
>2dt9_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; 2.15A {Thermus thermophilus} PDB: 2zho_A
Probab=90.15 E-value=0.75 Score=39.47 Aligned_cols=62 Identities=16% Similarity=0.102 Sum_probs=46.0
Q ss_pred ccEEEEEEcCC---ccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHHHHhhhhh
Q 018502 41 THGIHVFHCPD---EVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNA 115 (355)
Q Consensus 41 ~~~ILTV~GpD---r~GIVA~VS~~La~~g~NIld~~q~id~~~g~F~Mr~~v~~~~~~~~~~~L~~~l~~la~~lg~ 115 (355)
.-++++++|.+ +||+.+++.+.|+++|+||.-++. ... .+.+.++ .+...++++.|-+.|..
T Consensus 94 ~~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~~is~-----Se~-~is~vv~-------~~d~~~Av~~Lh~~f~~ 158 (167)
T 2dt9_A 94 DIAKVSIVGVGLASTPEVPAKMFQAVASTGANIEMIAT-----SEV-RISVIIP-------AEYAEAALRAVHQAFEL 158 (167)
T ss_dssp SEEEEEEEESSGGGSTHHHHHHHHHHHHTTCCCCEEEE-----CSS-EEEEEEE-------GGGHHHHHHHHHHHTC-
T ss_pred CEEEEEEECCCcccCcCHHHHHHHHHHHCCCCEEEEEc-----cCC-EEEEEEe-------HHHHHHHHHHHHHHHcC
Confidence 66889999987 999999999999999999977652 222 3344442 35567778877777754
No 54
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=90.12 E-value=0.91 Score=43.75 Aligned_cols=59 Identities=12% Similarity=0.277 Sum_probs=37.8
Q ss_pred HHHhcCCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChHHHhhcCCCeEEecCCCCCCCCC
Q 018502 199 LELVQNTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKG 272 (355)
Q Consensus 199 ~~~l~~~Dlivla~y~~~~~~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~~l~~~~~~~INiHpslLP~yrG 272 (355)
.+.++++|++.+-+|.+ - .+..++.-..-..-+|.+..++++..+..++=.|| ||++||
T Consensus 218 ~eav~~aDvvy~~~w~s-m------------g~~~~~~~~~~~~~~y~v~~ell~~a~~~ai~mH~--lP~~Rg 276 (315)
T 1pvv_A 218 VKAVKDADVIYTDVWAS-M------------GQEAEAEERRKIFRPFQVNKDLVKHAKPDYMFMHC--LPAHRG 276 (315)
T ss_dssp HHHTTTCSEEEECCCCC-S------------STTSSSSHHHHHHGGGCBCHHHHHTSCTTCEEEEC--SCCCBT
T ss_pred HHHhCCCCEEEEcceec-c------------CcccchHHHHHHHHhcCCCHHHHhhcCCCcEEECC--CCCCCC
Confidence 34566899999888843 0 00000000001123578999999988889999998 599876
No 55
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=89.98 E-value=0.92 Score=43.95 Aligned_cols=75 Identities=15% Similarity=0.189 Sum_probs=44.2
Q ss_pred HHHHCCCCeEEeCCCCChhHHHHHHHhcCCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChHHHhhc
Q 018502 176 FLERHGIPYHYLCAKENEREEELLELVQNTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSY 255 (355)
Q Consensus 176 ~a~~~gIP~~~~~~~~~~~~~~~~~~l~~~Dlivla~y~~~~~~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~~l~~~ 255 (355)
.|++.|..+.... ++.+.++++|++.+-+|.+ + .+..++.-..-..-+|.+.+++++..
T Consensus 216 ~a~~~G~~v~~~~--------d~~eav~~aDvvyt~~w~s------m-------g~~~~~~~~~~~~~~y~v~~ell~~a 274 (325)
T 1vlv_A 216 IVKETDGSVSFTS--------NLEEALAGADVVYTDVWAS------M-------GEEDKEKERMALLKPYQVNERVMEMT 274 (325)
T ss_dssp HHHHHCCEEEEES--------CHHHHHTTCSEEEECCCC-----------------------CHHHHGGGCBCHHHHHTT
T ss_pred HHHHcCCeEEEEc--------CHHHHHccCCEEEeccccc------c-------ccccchHhHHHHHhhcCCCHHHHHhc
Confidence 3446665554432 1334566899998888843 0 00001111111123578999999988
Q ss_pred -CCCeEEecCCCCCCCCCc
Q 018502 256 -GKDVINIHHGLLPSFKGG 273 (355)
Q Consensus 256 -~~~~INiHpslLP~yrG~ 273 (355)
+..+|=.|| ||++||.
T Consensus 275 ~k~dai~mH~--LP~~Rg~ 291 (325)
T 1vlv_A 275 GKSETIFMHC--LPAVKGQ 291 (325)
T ss_dssp CCTTCEEEEC--SCCCBTT
T ss_pred cCCCeEEECC--CCCCCCc
Confidence 778999998 5999873
No 56
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=89.31 E-value=1.3 Score=42.85 Aligned_cols=118 Identities=16% Similarity=0.261 Sum_probs=63.6
Q ss_pred CceEEEEEeCCchhHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHH----HHHHCCCCeEEeCCCCChhHHHHHHHhc
Q 018502 128 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIR----FLERHGIPYHYLCAKENEREEELLELVQ 203 (355)
Q Consensus 128 ~~riavl~S~~g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~----~a~~~gIP~~~~~~~~~~~~~~~~~~l~ 203 (355)
..|||+++-+ +.....++..+. .+++++.. ++...-.++..+.+ .|++.|..+.... ++.+.++
T Consensus 157 glkva~vGD~-~rva~Sl~~~~~--~~G~~v~~-~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~--------d~~eav~ 224 (323)
T 3gd5_A 157 GLKLAYVGDG-NNVAHSLLLGCA--KVGMSIAV-ATPEGFTPDPAVSARASEIAGRTGAEVQILR--------DPFEAAR 224 (323)
T ss_dssp TCEEEEESCC-CHHHHHHHHHHH--HHTCEEEE-ECCTTCCCCHHHHHHHHHHHHHHTCCEEEES--------CHHHHHT
T ss_pred CCEEEEECCC-CcHHHHHHHHHH--HcCCEEEE-ECCCcccCCHHHHHHHHHHHHHcCCeEEEEC--------CHHHHhc
Confidence 4677777654 322333433321 12456542 33322112233333 3445676665543 1344566
Q ss_pred CCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChHHHhhcCCCeEEecCCCCCCCCC
Q 018502 204 NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKG 272 (355)
Q Consensus 204 ~~Dlivla~y~~~~~~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~~l~~~~~~~INiHpslLP~yrG 272 (355)
++|+|.+-+|-. +- +..++.-....+-+|.+..++++..+..+|=+||. |.+||
T Consensus 225 ~aDvvyt~~wqs------~g-------~~~~~~~~~~~~~~y~vt~ell~~ak~dai~mHcl--Pa~Rg 278 (323)
T 3gd5_A 225 GAHILYTDVWTS------MG-------QEAETQHRLQLFEQYQINAALLNCAAAEAIVLHCL--PAHRG 278 (323)
T ss_dssp TCSEEEECCCC----------------------CCHHHHTTCCBCHHHHHTSCTTCEEEECS--CCCBT
T ss_pred CCCEEEEeceec------CC-------CcccchHHHHHhhccCCCHHHHhhcCCCcEEECCC--CCCCC
Confidence 899998888843 10 00111111222346789999999888899999995 89887
No 57
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=88.85 E-value=1.1 Score=43.64 Aligned_cols=72 Identities=14% Similarity=0.172 Sum_probs=43.8
Q ss_pred HHHCCCCeEEeCCCCChhHHHHHHHhcCCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChHHHhhcC
Q 018502 177 LERHGIPYHYLCAKENEREEELLELVQNTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYG 256 (355)
Q Consensus 177 a~~~gIP~~~~~~~~~~~~~~~~~~l~~~Dlivla~y~~~~~~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~~l~~~~ 256 (355)
|++.|..+.... ++.+.++++|+|.+-+|-. +-+-+. .-+...+-+|.+.+++++..+
T Consensus 228 a~~~G~~v~~~~--------d~~eav~~aDVvyt~~w~s------mg~e~~--------~~~~~~~~~y~vt~ell~~ak 285 (340)
T 4ep1_A 228 AKETGAEIEILH--------NPELAVNEADFIYTDVWMS------MGQEGE--------EEKYTLFQPYQINKELVKHAK 285 (340)
T ss_dssp HHHHCCCEEEES--------CHHHHHTTCSEEEECCC------------CH--------HHHHHHHGGGCBCHHHHTTSC
T ss_pred HHHcCCeEEEEC--------CHHHHhCCCCEEEecCccC------CCCCch--------HHHHHHhccccCCHHHHHhcC
Confidence 345666554432 1334566899998887742 110000 001112346789999999888
Q ss_pred CCeEEecCCCCCCCCC
Q 018502 257 KDVINIHHGLLPSFKG 272 (355)
Q Consensus 257 ~~~INiHpslLP~yrG 272 (355)
..+|=+||. |.+||
T Consensus 286 ~dai~MHcL--Pa~Rg 299 (340)
T 4ep1_A 286 QTYHFLHCL--PAHRE 299 (340)
T ss_dssp TTCEEEECS--CCCBT
T ss_pred CCcEEECCC--CCCCC
Confidence 899999995 99987
No 58
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=88.15 E-value=1.4 Score=42.27 Aligned_cols=59 Identities=17% Similarity=0.401 Sum_probs=39.0
Q ss_pred HHHhcCCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChHHHhhcCCCeEEecCCCCCCCCC
Q 018502 199 LELVQNTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKG 272 (355)
Q Consensus 199 ~~~l~~~Dlivla~y~~~~~~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~~l~~~~~~~INiHpslLP~yrG 272 (355)
.+.++++|+|.+-.|.. .+.|...+ -+...+-+|.+..++++..+..++=+||. |.+||
T Consensus 209 ~eav~~aDvvyt~~w~s---mg~e~~~~----------~~~~~~~~y~v~~e~l~~a~~~ai~mH~l--Pa~Rg 267 (307)
T 3tpf_A 209 FEALKDKDVVITDTWVS---MGEENEKE----------RKIKEFEGFMIDEKAMSVANKDAILLHCL--PAYRG 267 (307)
T ss_dssp HHHHTTCSEEEECCSSC---TTGGGGHH----------HHHHHTGGGCBCHHHHHHSCTTCEEEECS--CCCBT
T ss_pred HHHhcCCCEEEecCccc---CCchhhHH----------HHHHHhcccccCHHHHHhcCCCcEEECCC--CCCCC
Confidence 34556899999988732 11111110 00112245789999999988899999995 99887
No 59
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=87.29 E-value=1.6 Score=42.26 Aligned_cols=120 Identities=17% Similarity=0.198 Sum_probs=64.5
Q ss_pred CceEEEEEeCCchhHHHHHhhhhcCCCCeEEEEEEeCCCCC--CCchHHHH----HHH--CCCCeEEeCCCCChhHHHHH
Q 018502 128 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRG--PNSHVIRF----LER--HGIPYHYLCAKENEREEELL 199 (355)
Q Consensus 128 ~~riavl~S~~g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~--~~~~v~~~----a~~--~gIP~~~~~~~~~~~~~~~~ 199 (355)
..||++++-+.......++..+. .+++++. +++...-. ++..+.+. |++ .|..+.... ++.
T Consensus 161 gl~va~vGD~~~~va~Sl~~~~~--~~G~~v~-~~~P~~~~~~p~~~~~~~~~~~~~~~~~g~~v~~~~--------d~~ 229 (328)
T 3grf_A 161 GIKFAYCGDSMNNVTYDLMRGCA--LLGMECH-VCCPDHKDFKPIKEVIDECEEIIAKHGTGGSIKIFH--------DCK 229 (328)
T ss_dssp GCCEEEESCCSSHHHHHHHHHHH--HHTCEEE-EECCSSGGGSCCHHHHHHHHHHHHHHTCCCEEEEES--------SHH
T ss_pred CcEEEEeCCCCcchHHHHHHHHH--HcCCEEE-EECChHhhhCCCHHHHHHHHHHHhhccCCCeEEEEc--------CHH
Confidence 46888887553223334444332 2246654 33332211 22234333 444 676665543 234
Q ss_pred HHhcCCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChHHHhhcCCCeEEecCCCCCCCCC
Q 018502 200 ELVQNTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKG 272 (355)
Q Consensus 200 ~~l~~~Dlivla~y~~~~~~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~~l~~~~~~~INiHpslLP~yrG 272 (355)
+.++++|+|.+-.|.. .-.|.|-+.+ ..-.+-+|.+..++++..+..++=+||. |.+||
T Consensus 230 eav~~aDvvytd~W~s-m~iq~er~~~-----------~~~~~~~y~vt~~~l~~a~~~ai~mH~l--Pa~Rg 288 (328)
T 3grf_A 230 KGCEGVDVVYTDSWMS-YHITKEQKEA-----------RLKVLTPFQVDDAVMAVTSKRSIFMNCL--PATRG 288 (328)
T ss_dssp HHHTTCSEEEECCCC---------CCT-----------HHHHHGGGCBCHHHHTTSCTTCEEEECS--CCCTT
T ss_pred HHhcCCCEEEecCccc-cCCcHHHHHH-----------HHHHhcCCCCCHHHHHhcCCCCEEECCC--CCCCC
Confidence 5566899998766632 0012221111 1122346789999999988899999995 99987
No 60
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis}
Probab=86.10 E-value=0.63 Score=48.42 Aligned_cols=94 Identities=14% Similarity=0.058 Sum_probs=62.1
Q ss_pred CcccEEEEEEc-CCccchHHHHHHHHHhcCCeEeEeeeeccCC--CCeEEEEEEEEeCCCCCChHHHHHHHHHHHhhhhh
Q 018502 39 TLTHGIHVFHC-PDEVGIVAKLSECIASRGGNILAADVFVPEK--KNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNA 115 (355)
Q Consensus 39 ~~~~~ILTV~G-pDr~GIVA~VS~~La~~g~NIld~~q~id~~--~g~F~Mr~~v~~~~~~~~~~~L~~~l~~la~~lg~ 115 (355)
..+.+.||+.+ ||++|+.++|-+.|+++|+|+.=+.|..... +|.+..-+.|.++.. +.+...+.++++.++++.
T Consensus 441 ~~~~a~i~i~~~~~~~g~~~~if~~La~~~I~vDmI~q~~~~~~~~g~~~~~isftv~~~--d~~~a~~~l~~~~~~~~~ 518 (600)
T 3l76_A 441 DQDQAQIAIRHVPDRPGMAAQLFTALAEANISVDMIIQSQRCRINQGTPCRDIAFMVAEG--DSSQAEAILQPLIKDWLD 518 (600)
T ss_dssp ECSEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCEEEEEEECCCSSSSCEEEEEEEEEHH--HHHHHHHHHHHHTTTSTT
T ss_pred eCCEEEEEEecCCCCccHHHHHHHHHHHcCCcEEEEEecccccccCCCccceEEEEEeHH--HHHHHHHHHHHHHHhcCC
Confidence 34556777766 9999999999999999999998888875321 354333444444432 345566667777666663
Q ss_pred ccceeeeCCCCCCceEEEEEeCC
Q 018502 116 MRSVVRVPDIDPKYKVAVLASKQ 138 (355)
Q Consensus 116 ~~~~~~~~~~~~~~riavl~S~~ 138 (355)
.. +.-.+.--||++.+.|-
T Consensus 519 ~~----v~~~~~~akVSiVG~GM 537 (600)
T 3l76_A 519 AA----IVVNKAIAKVSIVGSGM 537 (600)
T ss_dssp CE----EEEECCEEEEEEECGGG
T ss_pred ce----EEEeCCeEEEEEECccc
Confidence 21 22224567888887654
No 61
>3s1t_A Aspartokinase; ACT domain, threonine binding, regulatory domain of aspartok transferase; 1.63A {Mycobacterium tuberculosis}
Probab=85.90 E-value=1.4 Score=38.59 Aligned_cols=62 Identities=18% Similarity=0.158 Sum_probs=48.1
Q ss_pred ccEEEEEEcC---CccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHHHHhhhhh
Q 018502 41 THGIHVFHCP---DEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNA 115 (355)
Q Consensus 41 ~~~ILTV~Gp---Dr~GIVA~VS~~La~~g~NIld~~q~id~~~g~F~Mr~~v~~~~~~~~~~~L~~~l~~la~~lg~ 115 (355)
.-.+++++|. ++||+.+++.+.|+++|+||.-++..-. .+.+.+ +.+...++++.+-+.|++
T Consensus 95 ~va~VsvVG~gm~~~~Gvaa~~f~aLa~~~InI~~IstSei------~Is~vV-------~~~d~~~Av~aLH~~f~l 159 (181)
T 3s1t_A 95 HIGKVSLIGAGMRSHPGVTATFCEALAAVGVNIELISTSEI------RISVLC-------RDTELDKAVVALHEAFGL 159 (181)
T ss_dssp CEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCEEEEETT------EEEEEE-------EGGGHHHHHHHHHHHHTC
T ss_pred CEEEEEEEecccccCchHHHHHHHHHHHCCCcEEEEEcCCC------EEEEEE-------eHHHHHHHHHHHHHHHcC
Confidence 5689999997 7999999999999999999999885311 222333 235678888888888876
No 62
>1zhv_A Hypothetical protein ATU0741; NESG, ATR8, structural genomics, PSI, protein struc initiative; 1.50A {Agrobacterium tumefaciens str} SCOP: d.58.18.8 d.58.18.8
Probab=84.30 E-value=1.4 Score=37.43 Aligned_cols=34 Identities=29% Similarity=0.506 Sum_probs=30.4
Q ss_pred EEEEEEcC---CccchHHHHHHHHHhcCCeEeEeeee
Q 018502 43 GIHVFHCP---DEVGIVAKLSECIASRGGNILAADVF 76 (355)
Q Consensus 43 ~ILTV~Gp---Dr~GIVA~VS~~La~~g~NIld~~q~ 76 (355)
..|++.|+ |-+||+|++|+.|+++|+-|--++.|
T Consensus 63 r~i~v~~~l~~~~vGilA~is~pLA~agIsif~iSty 99 (134)
T 1zhv_A 63 SCFKFQGPFAFDETGIVLSVISPLSTNGIGIFVVSTF 99 (134)
T ss_dssp EEEEECSCCCCSSCCHHHHHHHHHHTTTCCCEEEECS
T ss_pred EEEEEecCCCccHHHHHHHHHHHHHhCCCCeEEEEec
Confidence 47888887 89999999999999999988888877
No 63
>4go7_X Aspartokinase; transferase; 2.00A {Mycobacterium tuberculosis} PDB: 4go5_X
Probab=84.14 E-value=1.8 Score=38.96 Aligned_cols=63 Identities=19% Similarity=0.257 Sum_probs=48.5
Q ss_pred ccEEEEEEcC---CccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHHHHhhhhhc
Q 018502 41 THGIHVFHCP---DEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAM 116 (355)
Q Consensus 41 ~~~ILTV~Gp---Dr~GIVA~VS~~La~~g~NIld~~q~id~~~g~F~Mr~~v~~~~~~~~~~~L~~~l~~la~~lg~~ 116 (355)
.-+.++++|. .+||+-+++-+.|++.|+||.-++.. .. .+.+-++ .++..++++.+-+.|++.
T Consensus 114 ~iakVSvVG~GM~~~~GVaak~F~aLa~~~INI~mIstS-----Ei---~IS~vV~-----~~d~~~Av~aLH~~F~L~ 179 (200)
T 4go7_X 114 HIGKVSLIGAGMRSHPGVTATFCEALAAVGVNIELISTS-----EI---RISVLCR-----DTELDKAVVALHEAFGLG 179 (200)
T ss_dssp CEEEEEEEEESCTTCHHHHHHHHHHHHHTTCCCCEEEEC-----SS---EEEEEEE-----GGGHHHHHHHHHHHHTC-
T ss_pred CeeeeeeeccccccCCCcHHHHHHHHHHCCCCEEEEEcc-----CC---EEEEEEe-----HHHHHHHHHHHHHHhCCC
Confidence 5578899885 57899999999999999999998843 11 3333333 467899999999999973
No 64
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=83.74 E-value=3.3 Score=38.23 Aligned_cols=79 Identities=14% Similarity=0.127 Sum_probs=48.0
Q ss_pred CceEEEEEeCC-chhHHHHHhhhhcCCCCeEEEEEEeCCCCC---------CCchHHHHHHHCCCCeEEeCCCCC--hhH
Q 018502 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRG---------PNSHVIRFLERHGIPYHYLCAKEN--ERE 195 (355)
Q Consensus 128 ~~riavl~S~~-g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~---------~~~~v~~~a~~~gIP~~~~~~~~~--~~~ 195 (355)
.+|++++.||. .|++... ...+.| .+|.++++..+.. .-..+...|+..|||++.++.+.. ...
T Consensus 4 ~MKvvvl~SGGkDSs~al~-~l~~~G---~eV~~L~~~~~~~~~s~~~h~~~~e~a~~~A~~LGIpl~~v~~~g~~~~e~ 79 (237)
T 3rjz_A 4 LADVAVLYSGGKDSNYALY-WAIKNR---FSVKFLVTMVSENEESYMYHTINANLTDLQARALGIPLVKGFTQGEKEKEV 79 (237)
T ss_dssp CSEEEEECCSSHHHHHHHH-HHHHTT---CEEEEEEEEECC--------CCSSSHHHHHHHHHTCCEEEEEC------CH
T ss_pred CCEEEEEecCcHHHHHHHH-HHHHcC---CeEEEEEEEcCCCCCccccCCccHHHHHHHHHHcCCCEEEEECCCCchHHH
Confidence 37999999976 4655443 333445 6888875443221 123577889999999998874321 113
Q ss_pred HHHHHHhc--CCCEEEE
Q 018502 196 EELLELVQ--NTDFLVL 210 (355)
Q Consensus 196 ~~~~~~l~--~~Dlivl 210 (355)
+++.+.++ +.+-+|.
T Consensus 80 e~l~~~l~~~~i~~vv~ 96 (237)
T 3rjz_A 80 EDLKRVLSGLKIQGIVA 96 (237)
T ss_dssp HHHHHHHTTSCCSEEEC
T ss_pred HHHHHHHHhcCCcEEEE
Confidence 56667776 5676653
No 65
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=83.63 E-value=2.1 Score=41.48 Aligned_cols=73 Identities=15% Similarity=0.239 Sum_probs=43.9
Q ss_pred HHHHHCCCCeEEeCCCCChhHHHHHHHhcCCCEEEEEeeccccchhhHhhhhhhhhhhhc-ccCcccccccccCChHHHh
Q 018502 175 RFLERHGIPYHYLCAKENEREEELLELVQNTDFLVLARYMQPVPLQKEAYLGYKLLESLS-SKGSLTSYFNMILSGKFLR 253 (355)
Q Consensus 175 ~~a~~~gIP~~~~~~~~~~~~~~~~~~l~~~Dlivla~y~~~~~~~~~~~~~~~~~~~~~-~~~~~s~y~~~il~~~~l~ 253 (355)
+.|++.|..+.... ++.+.++++|+|.+-.|.+ ..+..+ +.-+.-..-+|-+..++++
T Consensus 203 ~~a~~~G~~v~~~~--------d~~eav~~aDvvytd~w~s-------------mg~~~~~~~er~~~~~~y~v~~~ll~ 261 (333)
T 1duv_G 203 ALAQQNGGNITLTE--------DVAKGVEGADFIYTDVWVS-------------MGEAKEKWAERIALLREYQVNSKMMQ 261 (333)
T ss_dssp HHHHHTTCEEEEES--------CHHHHHTTCSEEEECCSSC-------------TTSCTTHHHHHHHHHGGGCBCHHHHH
T ss_pred HHHHHcCCeEEEEE--------CHHHHhCCCCEEEeCCccc-------------cCccccchHHHHHHhhccccCHHHHH
Confidence 34446776554432 1334566899999888843 000000 0001111235789999999
Q ss_pred hc-CCCeEEecCCCCCCC
Q 018502 254 SY-GKDVINIHHGLLPSF 270 (355)
Q Consensus 254 ~~-~~~~INiHpslLP~y 270 (355)
.. +..++=+|| ||++
T Consensus 262 ~a~~~~ai~mHc--LP~~ 277 (333)
T 1duv_G 262 LTGNPEVKFLHC--LPAF 277 (333)
T ss_dssp TTCCTTCEEEEC--SCCC
T ss_pred hccCCCcEEECC--CCCC
Confidence 88 778999999 5887
No 66
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=83.59 E-value=1.9 Score=41.82 Aligned_cols=57 Identities=16% Similarity=0.282 Sum_probs=36.1
Q ss_pred HHHhcCCCEEEEEeeccccchhhHhhhhhhhhhhhc-ccCcccccccccCChHHHhhc-CCCeEEecCCCCCCC
Q 018502 199 LELVQNTDFLVLARYMQPVPLQKEAYLGYKLLESLS-SKGSLTSYFNMILSGKFLRSY-GKDVINIHHGLLPSF 270 (355)
Q Consensus 199 ~~~l~~~Dlivla~y~~~~~~~~~~~~~~~~~~~~~-~~~~~s~y~~~il~~~~l~~~-~~~~INiHpslLP~y 270 (355)
.+.++++|+|.+-.|.+ ..+..+ +.-+.-..-+|-+..++++.. +..++=+|| ||++
T Consensus 219 ~eav~~aDvvytd~w~s-------------mg~~~e~~~er~~~~~~y~v~~~ll~~a~~~~ai~mHc--LP~~ 277 (335)
T 1dxh_A 219 KEAVKGVDFVHTDVWVS-------------MGEPVEAWGERIKELLPYQVNMEIMKATGNPRAKFMHC--LPAF 277 (335)
T ss_dssp HHHTTTCSEEEECCCSC-------------SSSCGGGCHHHHHHHGGGCBCHHHHHTTCCSSCEEEEC--SCCC
T ss_pred HHHhCCCCEEEeCCccc-------------cCccchhhHHHHHHhhcceeCHHHHHhccCCCeEEECC--CCCC
Confidence 34556899999888843 000000 111111223578999999988 778999999 5887
No 67
>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 3kzc_A* 3kzk_A* 3kzm_A* 3kzn_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 2g6a_A* 3l05_A* 2g65_A* 3l02_A* 3m4n_A* 2g6c_A* 3l06_A* 2g68_A* ...
Probab=81.98 E-value=4.2 Score=39.86 Aligned_cols=61 Identities=13% Similarity=0.144 Sum_probs=37.9
Q ss_pred HHHhcCCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChHHHhhcCCCeEEecCCCCCCCCC
Q 018502 199 LELVQNTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKG 272 (355)
Q Consensus 199 ~~~l~~~Dlivla~y~~~~~~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~~l~~~~~~~INiHpslLP~yrG 272 (355)
.+.++++|+|.+-+|.. |-+.+ +..+..-..-..-+|.+..++++..+ .++=+|| ||.+||
T Consensus 260 ~eav~~aDvVyt~~w~s------e~~mg----~~~~~~~~~~~~~~y~vt~e~l~~a~-~ai~MHc--LP~~Rg 320 (359)
T 1zq6_A 260 DSAYAGADVVYAKSWGA------LPFFG----NWEPEKPIRDQYQHFIVDERKMALTN-NGVFSHC--LPLRRN 320 (359)
T ss_dssp HHHHTTCSEEEEECCCC------GGGTT----CCTTHHHHHGGGGGGSBCHHHHHTSS-SCEEECC--SCCCBT
T ss_pred HHHhcCCCEEEECCccc------cccCC----cchhhHHHHHHhcCCCCCHHHHHhCC-CCEEECC--CCCCCC
Confidence 34566899999988742 11100 00000001112345789999999988 9999999 488887
No 68
>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=81.70 E-value=2.4 Score=40.68 Aligned_cols=121 Identities=7% Similarity=0.078 Sum_probs=64.7
Q ss_pred eCCchhHHHHHhhh----hcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeCCCCChh---------------HH
Q 018502 136 SKQEHCLVDFLYGW----QEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENER---------------EE 196 (355)
Q Consensus 136 S~~g~~L~~ll~~~----~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~---------------~~ 196 (355)
+...|..|.|++.+ ..|.+..--++++.+..+ -.......+...|+-+..+..+.-.. ..
T Consensus 130 ~~~~HPtQaLaDl~Ti~e~~g~l~glkva~vGD~~~-va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~g~~v~~~~ 208 (309)
T 4f2g_A 130 TNEYHPCQVLADIFTYYEHRGPIRGKTVAWVGDANN-MLYTWIQAARILDFKLQLSTPPGYALDAKLVDAESAPFYQVFD 208 (309)
T ss_dssp CSSCCHHHHHHHHHHHHHHHSCCTTCEEEEESCCCH-HHHHHHHHHHHHTCEEEEECCGGGCCCGGGSCGGGGGGEEECS
T ss_pred CCccCcHHHHHHHHHHHHHhCCCCCCEEEEECCCcc-hHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHcCCeEEEEc
Confidence 44456666665542 135553222334444310 01245666777787766554221000 02
Q ss_pred HHHHHhcCCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChHHHhhcCCCeEEecCCCCCCCCC
Q 018502 197 ELLELVQNTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKG 272 (355)
Q Consensus 197 ~~~~~l~~~Dlivla~y~~~~~~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~~l~~~~~~~INiHpslLP~yrG 272 (355)
++.+.++++|+|.+-.|.. ..+..+..-+...+-+|.+..++++..+..+|=+||. |.+||
T Consensus 209 d~~eav~~aDvvyt~~w~s-------------mg~e~~~~~r~~~~~~y~v~~~~l~~a~~~ai~mH~l--P~~Rg 269 (309)
T 4f2g_A 209 DPNEACKGADLVTTDVWTS-------------MGFEAENEARKRAFADWCVDEEMMSHANSDALFMHCL--PAHRG 269 (309)
T ss_dssp SHHHHTTTCSEEEECCC-------------------------CCSGGGGCBCHHHHTTSCTTCEEEECS--SCCBT
T ss_pred CHHHHhcCCCEEEeccccc-------------CcchhhHHHHHHHhcCceeCHHHHHhcCCCeEEECCC--CCCCC
Confidence 3455666899998877632 0111111222233456899999999888899999995 88886
No 69
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=80.99 E-value=3 Score=40.94 Aligned_cols=56 Identities=13% Similarity=0.261 Sum_probs=35.4
Q ss_pred HHHhcCCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChHHHhhcC---CCeEEecCCCCCCC
Q 018502 199 LELVQNTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYG---KDVINIHHGLLPSF 270 (355)
Q Consensus 199 ~~~l~~~Dlivla~y~~~~~~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~~l~~~~---~~~INiHpslLP~y 270 (355)
.+.++++|+|.+-.|.+ ...|...++ .-..-+|-+..++++..+ ..++=+|| ||++
T Consensus 240 ~eav~~aDvvytd~w~s---mg~ee~~er-----------~~~~~~y~v~~ell~~ak~~~~dai~MHc--LP~~ 298 (359)
T 2w37_A 240 DEGLKGSNVVYTDVWVS---MGESNWEER-----------VKELTPYQVNMEAMKKTGTPDDQLIFMHC--LPAF 298 (359)
T ss_dssp HHHHTTCSEEEECCSCC---TTCTTHHHH-----------HHHHGGGCBCHHHHHTTCCCGGGCEEEEC--SCCC
T ss_pred HHHhcCCCEEEEccccc---ccccchHHH-----------HHHhhccccCHHHHHhhCCCCCCEEEECC--CCCC
Confidence 34566899999888832 000000111 011124689999999887 78999999 4887
No 70
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=80.15 E-value=2.9 Score=40.72 Aligned_cols=27 Identities=15% Similarity=0.311 Sum_probs=23.5
Q ss_pred cccCChHHHhhcCCCeEEecCCCCCCCCC
Q 018502 244 NMILSGKFLRSYGKDVINIHHGLLPSFKG 272 (355)
Q Consensus 244 ~~il~~~~l~~~~~~~INiHpslLP~yrG 272 (355)
+|.+..++++..+..+|=+||. |.+||
T Consensus 271 ~y~vt~ell~~ak~dai~mHcL--Pa~Rg 297 (339)
T 4a8t_A 271 KYQVNQEMMDRAGANCKFMHCL--PATRG 297 (339)
T ss_dssp TTCBCHHHHHHHCTTCEEEECS--CCCBT
T ss_pred ccccCHHHHHhcCCCcEEECCC--CCCCC
Confidence 3899999999888899999995 88875
No 71
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=79.99 E-value=3.9 Score=39.18 Aligned_cols=109 Identities=18% Similarity=0.239 Sum_probs=61.2
Q ss_pred CceEEEEEeCC-chhHHHHHhhhhcCCC-CeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeCCCCChhHHHHHHHhcCC
Q 018502 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKL-PVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNT 205 (355)
Q Consensus 128 ~~riavl~S~~-g~~L~~ll~~~~~~~l-~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l~~~ 205 (355)
..|||+++-+. +.....++..+. .+ ++++. +++...-.++..+.+.|++.|..+..... +.+.++++
T Consensus 151 glkva~vGD~~~~rva~Sl~~~~~--~~~G~~v~-~~~P~~~~~~~~~~~~~~~~g~~~~~~~d--------~~eav~~a 219 (306)
T 4ekn_B 151 GIKIAFVGDLKYGRTVHSLVYALS--LFENVEMY-FVSPKELRLPKDIIEDLKAKNIKFYEKES--------LDDLDDDI 219 (306)
T ss_dssp TCEEEEESCTTTCHHHHHHHHHHH--TSSSCEEE-EECCGGGCCCHHHHHHHHHTTCCEEEESC--------GGGCCTTC
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHH--hcCCCEEE-EECCcccccCHHHHHHHHHcCCEEEEEcC--------HHHHhcCC
Confidence 46888876543 223444554432 34 46654 33332211244567778888888765432 12334579
Q ss_pred CEEEEEeeccccchhhHhh---hhhhhhhhhcccCcccccccccCChHHHhhcCCCeEEecCCC
Q 018502 206 DFLVLARYMQPVPLQKEAY---LGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGL 266 (355)
Q Consensus 206 Dlivla~y~~~~~~~~~~~---~~~~~~~~~~~~~~~s~y~~~il~~~~l~~~~~~~INiHpsl 266 (355)
|+|.+-+|- +|-+ -+|.- ..-+|.+..++++. ..++=+||..
T Consensus 220 Dvvy~~~~q------~er~~~~~e~~~-----------~~~~y~v~~~~l~~--~~ai~mH~lP 264 (306)
T 4ekn_B 220 DVLYVTRIQ------KERFPDPNEYEK-----------VKGSYKIKREYVEG--KKFIIMHPLP 264 (306)
T ss_dssp SEEEECCCC------GGGCCSHHHHHH-----------HHHHHCBCHHHHTT--CCCEEECCSC
T ss_pred CEEEeCCcc------cccCCCHHHHHH-----------hccCcEECHHHHcC--CCCEEECCCC
Confidence 999877662 1211 12210 00247899999988 4799999963
No 72
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=79.89 E-value=3.1 Score=40.92 Aligned_cols=26 Identities=31% Similarity=0.585 Sum_probs=23.3
Q ss_pred cccCChHHHhhcCCCeEEecCCCCCCCC
Q 018502 244 NMILSGKFLRSYGKDVINIHHGLLPSFK 271 (355)
Q Consensus 244 ~~il~~~~l~~~~~~~INiHpslLP~yr 271 (355)
+|.+..++++..+..+|=+|| ||++|
T Consensus 279 ~y~vt~ell~~a~~dai~MHc--LP~~R 304 (365)
T 4amu_A 279 NFQVDMNMIKAAKNDVIFLHC--LPAFH 304 (365)
T ss_dssp TCCBCHHHHHHSCTTCEEEEC--SCCCC
T ss_pred ccccCHHHHHhcCCCcEEECC--CCCCC
Confidence 578999999988889999999 59998
No 73
>2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=78.16 E-value=4.8 Score=38.47 Aligned_cols=121 Identities=15% Similarity=0.157 Sum_probs=67.8
Q ss_pred eCCchhHHHHHhhh----hcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeCCCCChhHHHH------------H
Q 018502 136 SKQEHCLVDFLYGW----QEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEEL------------L 199 (355)
Q Consensus 136 S~~g~~L~~ll~~~----~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~------------~ 199 (355)
+...|..|.|++.+ ..|.+..--++.+.+..+ -..+....+...|+-+..+..+.-...+++ .
T Consensus 130 ~~~~HPtQaLaDl~Ti~e~~g~l~gl~ia~vGD~~r-va~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~d~~ 208 (301)
T 2ef0_A 130 SDRAHPLQALADLLTLKEVFGGLAGLEVAWVGDGNN-VLNSLLEVAPLAGLKVRVATPKGYEPDPGLLKRANAFFTHDPK 208 (301)
T ss_dssp CSSCCHHHHHHHHHHHHHHHSCCTTCEEEEESCCCH-HHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHTCEEESCHH
T ss_pred CCccCchHHHHHHHHHHHHhCCcCCcEEEEECCCch-hHHHHHHHHHHcCCEEEEECCchhcCCHHHHhhceeEEECCHH
Confidence 44457666666542 236654222334444310 113566777788888877654322112223 2
Q ss_pred HHhcCCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChHHHhhcCCCeEEecCCCCCCCCC
Q 018502 200 ELVQNTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKG 272 (355)
Q Consensus 200 ~~l~~~Dlivla~y~~~~~~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~~l~~~~~~~INiHpslLP~yrG 272 (355)
+.++++|++.+-+|.+ . .+..++.......-+|-+..++++..+..++=.|| ||++||
T Consensus 209 eav~~aDvvy~~~~~s----m---------g~~~~~~~~~~~~~~y~v~~e~l~~a~~~ai~mHp--lP~~Rg 266 (301)
T 2ef0_A 209 EAALGAHALYTDVWTS----M---------GQEAEREKRLRDFQGFQVNGELLKLLRPEGVFLHC--LPAHYG 266 (301)
T ss_dssp HHHTTCSEEEECCCC---------------------CHHHHHTTTCCBCHHHHTTSCTTCEEEEC--SCCCBT
T ss_pred HHhcCCCEEEecCccc----C---------CcccchhHHHHHhhccccCHHHHHhcCCCcEEECC--CCCCCC
Confidence 3455799998888853 0 11111111111223578999999988889999998 599987
No 74
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=77.44 E-value=9.2 Score=36.57 Aligned_cols=114 Identities=15% Similarity=0.106 Sum_probs=66.2
Q ss_pred CceEEEEEeCC-chhHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeCCCCChhHHHHHHHhcCCC
Q 018502 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTD 206 (355)
Q Consensus 128 ~~riavl~S~~-g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l~~~D 206 (355)
..||++++.+. +.....++..+. .+++++.. ++...-.++..+.+.|+++|..+..... +.+.++++|
T Consensus 155 gl~va~vGD~~~~rva~Sl~~~~~--~~G~~v~~-~~P~~~~~~~~~~~~~~~~g~~~~~~~d--------~~eav~~aD 223 (308)
T 1ml4_A 155 GLKIGLLGDLKYGRTVHSLAEALT--FYDVELYL-ISPELLRMPRHIVEELREKGMKVVETTT--------LEDVIGKLD 223 (308)
T ss_dssp SEEEEEESCTTTCHHHHHHHHHGG--GSCEEEEE-ECCGGGCCCHHHHHHHHHTTCCEEEESC--------THHHHTTCS
T ss_pred CeEEEEeCCCCcCchHHHHHHHHH--HCCCEEEE-ECCccccCCHHHHHHHHHcCCeEEEEcC--------HHHHhcCCC
Confidence 46788877553 234455555432 34566643 3332211234577888888888765432 234566899
Q ss_pred EEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChHHHhhcCCCeEEecCCC
Q 018502 207 FLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGL 266 (355)
Q Consensus 207 livla~y~~~~~~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~~l~~~~~~~INiHpsl 266 (355)
++.+-+|.. |-+. +.+...+ ..-+|-+.+++++..+..++=+||..
T Consensus 224 vvyt~~~q~------er~~------~~~~~~~--~~~~y~v~~~ll~~a~~~ai~mH~lP 269 (308)
T 1ml4_A 224 VLYVTRIQK------ERFP------DEQEYLK--VKGSYQVNLKVLEKAKDELRIMHPLP 269 (308)
T ss_dssp EEEECCCCG------GGSS------SHHHHHT--TTTCCCBCTTGGGGSCTTCEEECCSC
T ss_pred EEEECCccc------cccC------CHHHHHH--HhcCcccCHHHHhhcCCCCEEECCCC
Confidence 999888732 2110 0000001 11357899999998888999999863
No 75
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive, ACT DOMA amino-acid biosynthesis, threonine biosynthesis; HET: ANP; 2.30A {Methanocaldococcus jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Probab=77.30 E-value=6 Score=39.69 Aligned_cols=63 Identities=11% Similarity=0.047 Sum_probs=44.3
Q ss_pred cccEEEEEEc---CCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHHHHhhh
Q 018502 40 LTHGIHVFHC---PDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMF 113 (355)
Q Consensus 40 ~~~~ILTV~G---pDr~GIVA~VS~~La~~g~NIld~~q~id~~~g~F~Mr~~v~~~~~~~~~~~L~~~l~~la~~l 113 (355)
.+-..|++.| ++++|+.++|-+.|+++|+||.-++|.. +.+.+.+.++- ++..++++.+-+++
T Consensus 316 ~~~a~Isv~g~~m~~~~G~~a~if~~La~~~InV~~IsQ~t----se~~Is~~V~~-------~d~~~a~~~L~~~l 381 (473)
T 3c1m_A 316 KNVALINIFGAGMVGVSGTAARIFKALGEEEVNVILISQGS----SETNISLVVSE-------EDVDKALKALKREF 381 (473)
T ss_dssp EEEEEEEEEECSSSCHHHHHHHHHHHHHHTTCCEEEEEECC----TTCCEEEEEEG-------GGHHHHHHHHHHHH
T ss_pred CCeEEEEEecCCCCCCcCHHHHHHHHHHHcCCcEEEEEecC----CCCEEEEEEec-------hHHHHHHHHHHHHH
Confidence 3457899998 6788999999999999999999999842 22344444432 22445555555555
No 76
>2qmw_A PDT, prephenate dehydratase; APC85812, prephenate dehydratase (PDT), staphylococcus aureu aureus MU50, structural genomics, PSI-2; 2.30A {Staphylococcus aureus subsp} SCOP: c.94.1.1 d.58.18.3
Probab=76.87 E-value=8.2 Score=36.20 Aligned_cols=67 Identities=10% Similarity=-0.017 Sum_probs=44.0
Q ss_pred ccEEEEEEc---CCccchHHHHHHHHHhcCCeEeEeeeeccCC-CCeEEEEEEEEeCCCCCChHHHHHHHHHHHh
Q 018502 41 THGIHVFHC---PDEVGIVAKLSECIASRGGNILAADVFVPEK-KNVFYSRSEFIFDPIKWPREQMDEDFFKLSK 111 (355)
Q Consensus 41 ~~~ILTV~G---pDr~GIVA~VS~~La~~g~NIld~~q~id~~-~g~F~Mr~~v~~~~~~~~~~~L~~~l~~la~ 111 (355)
.+.-|.+.- +|+||-.+++=+.++.+|+|...+...-... .+.|.--+.++ . .+.+.++++|+++.+
T Consensus 185 ~ktsl~f~~~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD~e-~---~~d~~v~~aL~~L~~ 255 (267)
T 2qmw_A 185 NATSLMFLITPMHDKPGLLASVLNTFALFNINLSWIESRPLKTQLGMYRFFVQAD-S---AITTDIKKVIAILET 255 (267)
T ss_dssp SCSEEEEEEEESSCCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTCEEEEEEES-C---CSCHHHHHHHHHHHH
T ss_pred CeEEEEEEcCCCCCCcChHHHHHHHHHHcCCCeeEEEEeecCCCCccEEEEEEEe-c---CCcHHHHHHHHHHHH
Confidence 343344444 8999999999999999999999977753211 12232234443 2 234778888888754
No 77
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=76.68 E-value=3.6 Score=40.28 Aligned_cols=27 Identities=15% Similarity=0.311 Sum_probs=23.6
Q ss_pred cccCChHHHhhcCCCeEEecCCCCCCCCC
Q 018502 244 NMILSGKFLRSYGKDVINIHHGLLPSFKG 272 (355)
Q Consensus 244 ~~il~~~~l~~~~~~~INiHpslLP~yrG 272 (355)
+|.+..++++..+..+|=+||. |.+||
T Consensus 249 ~y~vt~ell~~ak~dai~MHcL--Pa~Rg 275 (355)
T 4a8p_A 249 KYQVNQEMMDRAGANCKFMHCL--PATRG 275 (355)
T ss_dssp TTCBCHHHHHHHCTTCEEEECS--CCCBT
T ss_pred ccccCHHHHHhcCCCcEEECCC--CCCCC
Confidence 3899999999888899999995 88876
No 78
>1zvp_A Hypothetical protein VC0802; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 2.20A {Vibrio cholerae} SCOP: d.58.18.9 d.58.18.9
Probab=75.93 E-value=4.3 Score=34.34 Aligned_cols=34 Identities=15% Similarity=0.238 Sum_probs=28.9
Q ss_pred EEEEEEc---CCccchHHHHHHHHHhcCCeEeEeeee
Q 018502 43 GIHVFHC---PDEVGIVAKLSECIASRGGNILAADVF 76 (355)
Q Consensus 43 ~ILTV~G---pDr~GIVA~VS~~La~~g~NIld~~q~ 76 (355)
..||+.| -|-+|++|+|++.|+++|+-|--++.|
T Consensus 72 r~i~l~~~~~l~~vGi~a~is~~LA~agIsif~iSty 108 (133)
T 1zvp_A 72 SLITLTVHSSLEAVGLTAAFATKLAEHGISANVIAGY 108 (133)
T ss_dssp EEEEEECCC--CCSCHHHHHHHHHHHTTCCCEEEECS
T ss_pred EEEEEeccCCccHHHHHHHHHHHHHhCCCCcEEEEec
Confidence 3566666 599999999999999999999988887
No 79
>2qmx_A Prephenate dehydratase; APC86053, L-Phe inhibition, PDT, CHL tepidum TLS, structural genomics, PSI-2, protein structure initiative; HET: PHE; 2.30A {Chlorobium tepidum tls}
Probab=75.82 E-value=7.2 Score=36.87 Aligned_cols=64 Identities=14% Similarity=0.182 Sum_probs=43.2
Q ss_pred EEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCC-CCeEEEEEEEEeCCCCCChHHHHHHHHHHHh
Q 018502 43 GIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEK-KNVFYSRSEFIFDPIKWPREQMDEDFFKLSK 111 (355)
Q Consensus 43 ~ILTV~GpDr~GIVA~VS~~La~~g~NIld~~q~id~~-~g~F~Mr~~v~~~~~~~~~~~L~~~l~~la~ 111 (355)
+++++ +|+||-.+++=+.++.+|+|...+...-... .+.|.--+.+ ++ ..+-+.++++|+++.+
T Consensus 203 l~f~~--~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfvD~--eg-~~~d~~v~~aL~~L~~ 267 (283)
T 2qmx_A 203 IVFAL--PNEQGSLFRALATFALRGIDLTKIESRPSRKKAFEYLFYADF--IG-HREDQNVHNALENLRE 267 (283)
T ss_dssp EEEEE--ECCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTEEEEEEEE--ES-CTTSHHHHHHHHHHHT
T ss_pred EEEEc--CCCCchHHHHHHHHHHcCCCeeEEEeeEcCCCCcceEEEEEE--ec-CCCcHHHHHHHHHHHH
Confidence 44444 7999999999999999999999987753211 1223323444 33 2244778888888754
No 80
>3mwb_A Prephenate dehydratase; L-Phe, PSI, MCSG, structural genomics, midwest center for ST genomics, protein structure initiative, lyase; HET: MSE PHE; 2.00A {Arthrobacter aurescens}
Probab=75.60 E-value=9.5 Score=36.62 Aligned_cols=69 Identities=14% Similarity=0.171 Sum_probs=44.8
Q ss_pred ccEEEEEEcC-CccchHHHHHHHHHhcCCeEeEeeeeccC-CCCeEEEEEEEEeCCCCCChHHHHHHHHHHHhh
Q 018502 41 THGIHVFHCP-DEVGIVAKLSECIASRGGNILAADVFVPE-KKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKM 112 (355)
Q Consensus 41 ~~~ILTV~Gp-Dr~GIVA~VS~~La~~g~NIld~~q~id~-~~g~F~Mr~~v~~~~~~~~~~~L~~~l~~la~~ 112 (355)
.+.-|.+.-+ |+||-.+++=+.++.+|+|...+...-.. .-+.|.--+.++ + ..+-+.++++|+++.+.
T Consensus 200 ~kTSl~f~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD~e--g-~~~d~~v~~aL~~L~~~ 270 (313)
T 3mwb_A 200 DKTTVVVPLPEDHPGALMEILDQFASRGVNLSRIESRPTGQYLGHYFFSIDAD--G-HATDSRVADALAGLHRI 270 (313)
T ss_dssp EEEEEEEECSSCCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTSEEEEEEEE--S-CTTSHHHHHHHHHHHHH
T ss_pred CeEEEEEEeCCCCCCHHHHHHHHHHHCCccEEEEEEeecCCCCccEEEEEEEe--C-CCCcHHHHHHHHHHHHh
Confidence 4444445555 99999999999999999999887665211 112232234443 3 23457788888887554
No 81
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum}
Probab=74.12 E-value=6.3 Score=39.49 Aligned_cols=82 Identities=13% Similarity=0.022 Sum_probs=50.9
Q ss_pred EEEEEEc---CCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChH-HHHHHHHHHHhhhhhccc
Q 018502 43 GIHVFHC---PDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPRE-QMDEDFFKLSKMFNAMRS 118 (355)
Q Consensus 43 ~ILTV~G---pDr~GIVA~VS~~La~~g~NIld~~q~id~~~g~F~Mr~~v~~~~~~~~~~-~L~~~l~~la~~lg~~~~ 118 (355)
..|++.+ ++++|+.++|-+.|+++|+||.-+++... .+.+.++-+ +.+ .+.+.++++.++++..
T Consensus 299 ~~i~i~~~~~~~~~g~~~~if~~l~~~~i~vd~i~~~~~------~is~~V~~~----d~~~~~~~~~~el~~~~~~~-- 366 (446)
T 3tvi_A 299 TVIAIEKALLNSEVGFCRKILSILEMYGVSFEHMPSGVD------SVSLVIEDC----KLDGKCDKIIEEIKKQCNPD-- 366 (446)
T ss_dssp EEEEEECTTGGGSTTHHHHHHHHHHTTTCCEEEBCEETT------EEEEEEEHH----HHTTTHHHHHHHHHHHSCCS--
T ss_pred EEEEEEecCCCccHHHHHHHHHHHHHcCCcEEEEecCCC------EEEEEEecc----hHHHHHHHHHHHHHHhcCCC--
Confidence 5688988 58999999999999999999998876521 222333221 111 3455566666666532
Q ss_pred eeeeCCCCCCceEEEEEeCC
Q 018502 119 VVRVPDIDPKYKVAVLASKQ 138 (355)
Q Consensus 119 ~~~~~~~~~~~riavl~S~~ 138 (355)
..++ .+..-+|++.+.+-
T Consensus 367 ~v~v--~~~vA~VSvVG~gM 384 (446)
T 3tvi_A 367 SIEI--HPNMALVATVGTGM 384 (446)
T ss_dssp EEEE--EEEEEEEEEECGGG
T ss_pred cEEE--eCCeEEEEEECCCc
Confidence 1221 23445777776653
No 82
>3luy_A Probable chorismate mutase; structural genomics, APC38059, 3-phenylp PSI-2, protein structure initiative; HET: PPY; 2.00A {Bifidobacterium adolescentis}
Probab=73.91 E-value=16 Score=35.23 Aligned_cols=67 Identities=10% Similarity=0.035 Sum_probs=45.3
Q ss_pred EEEEEEc-CCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHHHHh
Q 018502 43 GIHVFHC-PDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSK 111 (355)
Q Consensus 43 ~ILTV~G-pDr~GIVA~VS~~La~~g~NIld~~q~id~~~g~F~Mr~~v~~~~~~~~~~~L~~~l~~la~ 111 (355)
-++.+.- .|+||-.+++=+.++.+|+|...+...-.. ++.+--+.-+|+++ ..+-+.++++|+++.+
T Consensus 208 s~i~~~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~-~~~~~Y~FfiD~eg-~~~d~~v~~AL~~L~~ 275 (329)
T 3luy_A 208 SVLTLIPLVTGPGVLANLLDVFRDAGLNMTSFISRPIK-GRTGTYSFIVTLDA-APWEERFRDALVEIAE 275 (329)
T ss_dssp EEEEEECSCCSTTHHHHHHHHHHHTTCCEEEEEEEEET-TEEEEEEEEEEESS-CTTSHHHHHHHHHHHH
T ss_pred EEEEEecCCCCCCHHHHHHHHHHHCCcceEEEEeeECC-CCCccEEEEEEEeC-CcCCHHHHHHHHHHHH
Confidence 3444443 389999999999999999999887775221 22223334466665 3345788899988754
No 83
>3mah_A Aspartokinase; aspartate kinase, structural genomics, MCSG, transferase, PSI-2; 2.31A {Porphyromonas gingivalis}
Probab=73.72 E-value=4.1 Score=34.44 Aligned_cols=92 Identities=10% Similarity=-0.052 Sum_probs=53.8
Q ss_pred cccEEEEEEc---CCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHHHHhhhhhc
Q 018502 40 LTHGIHVFHC---PDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAM 116 (355)
Q Consensus 40 ~~~~ILTV~G---pDr~GIVA~VS~~La~~g~NIld~~q~id~~~g~F~Mr~~v~~~~~~~~~~~L~~~l~~la~~lg~~ 116 (355)
.+-..+++.| +|++|+.+++-+.|+++|+||.-+.|... .+.|-+++.. .+.+.++++.+ ++
T Consensus 16 ~~va~Iti~~~~m~~~~g~~~~if~~La~~~I~vd~I~~s~~--------~Isf~v~~~~----~~~~il~~l~~-~~-- 80 (157)
T 3mah_A 16 DGITVIKVKSSNKLLSWHFMRKLFEIFEFYQEPVDMVATSEV--------GVSLTIDNDK----NLPDIVRALSD-IG-- 80 (157)
T ss_dssp EEEEEEEEEECTTSCHHHHHHHHHHHHHHTTCCCSCEECCSS--------EEEEEESCCT----THHHHHHHHTT-TE--
T ss_pred CCEEEEEEEeCCCCCchhHHHHHHHHHHHcCCCEEEEEecCC--------EEEEEECChH----HHHHHHHHHhc-cC--
Confidence 3557888885 57899999999999999999999888532 3444455421 34555555543 21
Q ss_pred cceeeeCCCCCCceEEEEEeCCc---hhHHHHHhhhh
Q 018502 117 RSVVRVPDIDPKYKVAVLASKQE---HCLVDFLYGWQ 150 (355)
Q Consensus 117 ~~~~~~~~~~~~~riavl~S~~g---~~L~~ll~~~~ 150 (355)
...+ .+..-+|.+.+++-. ..+..++..+.
T Consensus 81 --~v~~--~~~~a~vsvvG~gm~~~~gv~a~~f~aL~ 113 (157)
T 3mah_A 81 --DVTV--DKDMVIICIVGDMEWDNVGFEARIINALK 113 (157)
T ss_dssp --EEEE--EEEEEEEEEEC------CCHHHHHHHTTT
T ss_pred --eEEE--eCCeEEEEEECCCcccCccHHHHHHHHhC
Confidence 1222 223456666665432 23344555543
No 84
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=73.51 E-value=13 Score=35.73 Aligned_cols=116 Identities=13% Similarity=0.220 Sum_probs=62.9
Q ss_pred CceEEEEEeCCchhHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHH----HHHHCCCCeEEeCCCCChhHHHHHHHhc
Q 018502 128 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIR----FLERHGIPYHYLCAKENEREEELLELVQ 203 (355)
Q Consensus 128 ~~riavl~S~~g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~----~a~~~gIP~~~~~~~~~~~~~~~~~~l~ 203 (355)
..||++++-+. .....++..+. .+++++.. ++...-..+..+.+ .|++.|..+.... ++.+.++
T Consensus 155 gl~va~vGD~~-~va~Sl~~~~~--~~G~~v~~-~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~--------d~~eav~ 222 (321)
T 1oth_A 155 GLTLSWIGDGN-NILHSIMMSAA--KFGMHLQA-ATPKGYEPDASVTKLAEQYAKENGTKLLLTN--------DPLEAAH 222 (321)
T ss_dssp TCEEEEESCSS-HHHHHHHTTTG--GGTCEEEE-ECCTTCCCCHHHHHHHHHHHHHHTCCEEEES--------CHHHHHT
T ss_pred CcEEEEECCch-hhHHHHHHHHH--HcCCeEEE-ECCccccCCHHHHHHHHHHHHHcCCeEEEEE--------CHHHHhc
Confidence 46788776542 23344444431 34566642 33322112333333 4446777665543 1345566
Q ss_pred CCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChHHHhhcCCCeEEecCCCCCCC
Q 018502 204 NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSF 270 (355)
Q Consensus 204 ~~Dlivla~y~~~~~~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~~l~~~~~~~INiHpslLP~y 270 (355)
++|+|.+-.|.+ .+.|.+ +.-+.-..-+|-+..++++..+..+|=+||. |++
T Consensus 223 ~aDvvy~d~w~s---~g~e~~----------~~~~~~~~~~y~v~~~~l~~a~~dai~mH~l--P~~ 274 (321)
T 1oth_A 223 GGNVLITDTWIS---MGREEE----------KKKRLQAFQGYQVTMKTAKVAASDWTFLHCL--PRK 274 (321)
T ss_dssp TCSEEEECCSSC---TTCGGG----------HHHHHHHTTTCCBCHHHHHTSCTTCEEEECS--CCC
T ss_pred cCCEEEEecccc---ccchhh----------hHHHHHhccCceECHHHHhhcCCCCEEECCC--CCC
Confidence 899998766754 111110 1011111235789999999888899999996 665
No 85
>1wy5_A TILS, hypothetical UPF0072 protein AQ_1887; N-type ATP-ppase, structural genomics, translation, NPPSFA; 2.42A {Aquifex aeolicus} SCOP: c.26.2.5 d.229.1.1 PDB: 2e21_A* 2e89_A*
Probab=73.36 E-value=8.1 Score=36.30 Aligned_cols=79 Identities=11% Similarity=0.074 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHhhhhhccceeeeCCCCCCceEEEEEeCCc--hhHHHHHhhhhcCCCCeE-EEEEEeCCCCCC-----Cc
Q 018502 100 EQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQE--HCLVDFLYGWQEGKLPVE-ITCVISNHDRGP-----NS 171 (355)
Q Consensus 100 ~~L~~~l~~la~~lg~~~~~~~~~~~~~~~riavl~S~~g--~~L~~ll~~~~~~~l~~e-I~~Vis~~~~~~-----~~ 171 (355)
..+.+.+.+..+++++ + .+..||+|..||.. .+|-.++..++. .++.+ +.+|..+|.-.. ..
T Consensus 5 ~~~~~~~~~~i~~~~l----~-----~~~~~vlva~SGG~DS~~Ll~ll~~~~~-~~g~~~v~av~vd~g~r~~s~~~~~ 74 (317)
T 1wy5_A 5 SRVIRKVLALQNDEKI----F-----SGERRVLIAFSGGVDSVVLTDVLLKLKN-YFSLKEVALAHFNHMLRESAERDEE 74 (317)
T ss_dssp HHHHHHHHHHHHHHCS----C-----SSCCEEEEECCSSHHHHHHHHHHHHSTT-TTTCSEEEEEEEECCSSTHHHHHHH
T ss_pred HHHHHHHHHHHHHcCC----C-----CCCCEEEEEecchHHHHHHHHHHHHHHH-HcCCCEEEEEEEECCCCcccHHHHH
Confidence 4456666666555554 1 23468999999863 355556654432 34567 887777774321 13
Q ss_pred hHHHHHHHCCCCeEEeC
Q 018502 172 HVIRFLERHGIPYHYLC 188 (355)
Q Consensus 172 ~v~~~a~~~gIP~~~~~ 188 (355)
.+.++|+++|||++.+.
T Consensus 75 ~v~~~a~~lgi~~~v~~ 91 (317)
T 1wy5_A 75 FCKEFAKERNMKIFVGK 91 (317)
T ss_dssp HHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHcCCcEEEEE
Confidence 47889999999998765
No 86
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=72.71 E-value=15 Score=35.81 Aligned_cols=118 Identities=14% Similarity=0.202 Sum_probs=66.5
Q ss_pred CCceEEEEEeCCchhHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHC------CCCeEEeCCCCChhHHHHHH
Q 018502 127 PKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERH------GIPYHYLCAKENEREEELLE 200 (355)
Q Consensus 127 ~~~riavl~S~~g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~------gIP~~~~~~~~~~~~~~~~~ 200 (355)
...||++++-.. +....++..+. .+++++.. ++...-..+..+.+.|++. |..+.... ++.+
T Consensus 187 ~glkva~vGD~~-nva~Sl~~~l~--~lG~~v~~-~~P~~~~~~~~i~~~~~~~a~~~~~g~~~~~~~--------d~~e 254 (353)
T 3sds_A 187 EGLKIAWVGDAN-NVLFDLAIAAT--KMGVNVAV-ATPRGYEIPSHIVELIQKAREGVQSPGNLTQTT--------VPEV 254 (353)
T ss_dssp TTCEEEEESCCC-HHHHHHHHHHH--HTTCEEEE-ECCTTCCCCHHHHHHHHHHHTTCSSCCCEEEES--------CHHH
T ss_pred CCCEEEEECCCc-hHHHHHHHHHH--HcCCEEEE-ECCcccCCCHHHHHHHHHhhhhccCCCeEEEEC--------CHHH
Confidence 457899887543 33444554432 23567653 3333211245666666643 55665543 2445
Q ss_pred HhcCCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChHHHhh--cCCCeEEecCCCCCCCC
Q 018502 201 LVQNTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRS--YGKDVINIHHGLLPSFK 271 (355)
Q Consensus 201 ~l~~~Dlivla~y~~~~~~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~~l~~--~~~~~INiHpslLP~yr 271 (355)
.++++|+|.+-.|.. .|.|.+- ++ ++-.+-+|.+..++++. .+..+|=+||. |+++
T Consensus 255 av~~aDVvytd~w~s---mg~E~~~-~~---------r~~~~~~y~vt~ell~~~~ak~~ai~MHcL--P~~~ 312 (353)
T 3sds_A 255 AVKDADVIVTDTWIS---MGQETEK-IK---------RLEAFKDFKVTSELAKRGGAKENWKFMHCL--PRHP 312 (353)
T ss_dssp HTTTCSEEEECCC-----------C-HH---------HHHHTTTCCBCHHHHHHHTCCTTCEEEECS--CCCT
T ss_pred HhcCCCEEEeCCccC---CchhhHH-HH---------HHHHhhCceecHHHHhhcccCCCcEEECCC--CCCC
Confidence 667899998866632 2222211 11 11123568999999998 67789999996 7764
No 87
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=72.03 E-value=13 Score=35.62 Aligned_cols=112 Identities=14% Similarity=0.191 Sum_probs=55.6
Q ss_pred ceEEEEEeCC-chhHHHHHhhhhcCCC-CeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeCCCCChhHHHHHHHhcCCC
Q 018502 129 YKVAVLASKQ-EHCLVDFLYGWQEGKL-PVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTD 206 (355)
Q Consensus 129 ~riavl~S~~-g~~L~~ll~~~~~~~l-~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l~~~D 206 (355)
.||++++.+. +.....++..+. .+ ++++.. ++...-.++..+.+.|++.|..+..... +.+.++++|
T Consensus 155 l~va~vGD~~~~rva~Sl~~~~~--~~~g~~v~~-~~P~~~~~~~~~~~~~~~~g~~~~~~~d--------~~eav~~aD 223 (310)
T 3csu_A 155 LHVAMVGDLKYGRTVHSLTQALA--KFDGNRFYF-IAPDALAMPQYILDMLDEKGIAWSLHSS--------IEEVMAEVD 223 (310)
T ss_dssp CEEEEESCTTTCHHHHHHHHHHH--TSSSCEEEE-ECCGGGCCCHHHHHHHHHTTCCEEECSC--------GGGTTTTCS
T ss_pred cEEEEECCCCCCchHHHHHHHHH--hCCCCEEEE-ECCcccccCHHHHHHHHHcCCeEEEEcC--------HHHHhcCCC
Confidence 5677665442 223334444321 23 455542 2322111223455667777766544321 223455799
Q ss_pred EEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChHHHhhcCCCeEEecCCC
Q 018502 207 FLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGL 266 (355)
Q Consensus 207 livla~y~~~~~~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~~l~~~~~~~INiHpsl 266 (355)
++.+-+|.. |-+ +.+.... ..-+|.+..++++..+..++=+||..
T Consensus 224 vvyt~~~q~------er~-------~~~~~~~--~~~~y~v~~~ll~~a~~~ai~mH~lP 268 (310)
T 3csu_A 224 ILYMTRVQK------ERL-------DPSEYAN--VKAQFVLRASDLHNAKANMKVLHPLP 268 (310)
T ss_dssp EEEECC--------------------------------CCBCGGGGTTCCTTCEEECCSC
T ss_pred EEEECCccc------ccc-------CHHHHHH--HhhccCCCHHHHhhcCCCCEEECCCC
Confidence 998887732 210 0000011 11357899999998888999999863
No 88
>1ni5_A Putative cell cycle protein MESJ; structural genomics, ATPase, PP-type, putative cell cycle PR PSI, protein structure initiative; 2.65A {Escherichia coli} SCOP: b.153.1.2 c.26.2.5 d.229.1.1
Probab=70.23 E-value=8.4 Score=38.05 Aligned_cols=61 Identities=16% Similarity=0.218 Sum_probs=42.8
Q ss_pred CceEEEEEeCCc--hhHHHHHhhhhcCCCCeEEEEEEeCCCCCCC-----chHHHHHHHCCCCeEEeC
Q 018502 128 KYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGPN-----SHVIRFLERHGIPYHYLC 188 (355)
Q Consensus 128 ~~riavl~S~~g--~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~-----~~v~~~a~~~gIP~~~~~ 188 (355)
..||+|.+||.. .+|-.++..++....+.++.+|..||.-... ..+.++|+++|||++...
T Consensus 13 ~~~vlVa~SGG~DS~~Ll~ll~~~~~~~~g~~v~avhvdhglr~~s~~~~~~v~~~~~~lgi~~~v~~ 80 (433)
T 1ni5_A 13 SRQILVAFSGGLDSTVLLHQLVQWRTENPGVALRAIHVHHGLSANADAWVTHCENVCQQWQVPLVVER 80 (433)
T ss_dssp CSEEEEECCSBHHHHHHHHHHHHHHTTSTTCEEEEEEECCSCCSSHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCEEEEEEcchHHHHHHHHHHHHHHHhcCCCeEEEEEEECCCCcccHHHHHHHHHHHHHcCCcEEEEE
Confidence 458999999863 3666666654422145788888888753222 257899999999998876
No 89
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=69.64 E-value=7.1 Score=36.52 Aligned_cols=73 Identities=5% Similarity=0.033 Sum_probs=42.0
Q ss_pred CCceEEEEEeCC-chh-HHH---HHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeCCCCChhHHHHHHH
Q 018502 127 PKYKVAVLASKQ-EHC-LVD---FLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLEL 201 (355)
Q Consensus 127 ~~~riavl~S~~-g~~-L~~---ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~ 201 (355)
+|.||+|++.|. |.. +.. +.... ...-.+++++|+.... ....++|+++|+|-.+-+ +.++
T Consensus 24 kkirvgiIG~G~ig~~H~~a~~~~~~~~-~~~~~~~lvav~d~~~----~~a~~~a~~~g~~~~y~d---------~~el 89 (393)
T 4fb5_A 24 KPLGIGLIGTGYMGKCHALAWNAVKTVF-GDVERPRLVHLAEANA----GLAEARAGEFGFEKATAD---------WRAL 89 (393)
T ss_dssp CCCEEEEECCSHHHHHHHHHHTTHHHHH-CSSCCCEEEEEECC------TTHHHHHHHHTCSEEESC---------HHHH
T ss_pred CCccEEEEcCCHHHHHHHHHHHhhhhhh-ccCCCcEEEEEECCCH----HHHHHHHHHhCCCeecCC---------HHHH
Confidence 457999998775 211 111 11111 1111479999886543 246889999999965421 2344
Q ss_pred hc--CCCEEEEEee
Q 018502 202 VQ--NTDFLVLARY 213 (355)
Q Consensus 202 l~--~~Dlivla~y 213 (355)
|. ++|.|+++.-
T Consensus 90 l~~~~iDaV~IatP 103 (393)
T 4fb5_A 90 IADPEVDVVSVTTP 103 (393)
T ss_dssp HHCTTCCEEEECSC
T ss_pred hcCCCCcEEEECCC
Confidence 44 6888887643
No 90
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=69.57 E-value=7.3 Score=36.40 Aligned_cols=69 Identities=9% Similarity=0.200 Sum_probs=42.9
Q ss_pred CCCceEEEEEeCC-c--hhHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeCCCCChhHHHHHHHh
Q 018502 126 DPKYKVAVLASKQ-E--HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELV 202 (355)
Q Consensus 126 ~~~~riavl~S~~-g--~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l 202 (355)
..+.||+|++.|. | |-+.. +.. .+ .+++++|+.... ....++|+++|+|-.+-+ +.++|
T Consensus 21 ~~mirigiIG~G~ig~~~~~~~-~~~--~~--~~~lvav~d~~~----~~a~~~a~~~g~~~~y~d---------~~ell 82 (350)
T 4had_A 21 QSMLRFGIISTAKIGRDNVVPA-IQD--AE--NCVVTAIASRDL----TRAREMADRFSVPHAFGS---------YEEML 82 (350)
T ss_dssp -CCEEEEEESCCHHHHHTHHHH-HHH--CS--SEEEEEEECSSH----HHHHHHHHHHTCSEEESS---------HHHHH
T ss_pred cCccEEEEEcChHHHHHHHHHH-HHh--CC--CeEEEEEECCCH----HHHHHHHHHcCCCeeeCC---------HHHHh
Confidence 3578999998875 2 22222 222 11 489999876432 357889999999965421 33444
Q ss_pred c--CCCEEEEEe
Q 018502 203 Q--NTDFLVLAR 212 (355)
Q Consensus 203 ~--~~Dlivla~ 212 (355)
. ++|.|+++.
T Consensus 83 ~~~~iDaV~I~t 94 (350)
T 4had_A 83 ASDVIDAVYIPL 94 (350)
T ss_dssp HCSSCSEEEECS
T ss_pred cCCCCCEEEEeC
Confidence 4 688888764
No 91
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive, ACT DOMA amino-acid biosynthesis, threonine biosynthesis; HET: ANP; 2.30A {Methanocaldococcus jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Probab=69.50 E-value=10 Score=37.91 Aligned_cols=64 Identities=16% Similarity=0.074 Sum_probs=47.1
Q ss_pred ccEEEEEEcCC---ccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHHHHhhhhh
Q 018502 41 THGIHVFHCPD---EVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNA 115 (355)
Q Consensus 41 ~~~ILTV~GpD---r~GIVA~VS~~La~~g~NIld~~q~id~~~g~F~Mr~~v~~~~~~~~~~~L~~~l~~la~~lg~ 115 (355)
+-.+++++|.. +||+.+++.+.|+++|+||.-++|... +. .+.+.++ .+...++++.+-+.|..
T Consensus 403 ~~a~vsvVG~gm~~~~Gvaak~f~aL~~~~InI~misqgtS---e~-~Is~vV~-------~~d~~~Av~aLh~~f~~ 469 (473)
T 3c1m_A 403 DVCVISVVGAGMRGAKGIAGKIFTAVSESGANIKMIAQGSS---EV-NISFVID-------EKDLLNCVRKLHEKFIE 469 (473)
T ss_dssp EEEEEEEECTTTTTCTTHHHHHHHHHHHHTCCCCEEEESSC---SS-EEEEEEE-------GGGHHHHHHHHHHHHTT
T ss_pred CcEEEEEEecCCCCChhHHHHHHHHHHHCCCCEEEEecCCC---Cc-eEEEEEc-------HHHHHHHHHHHHHHHhc
Confidence 55889999975 899999999999999999988887532 22 2333332 35567777777777753
No 92
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=69.20 E-value=9.4 Score=37.51 Aligned_cols=62 Identities=15% Similarity=0.140 Sum_probs=46.1
Q ss_pred ccEEEEEEcC---CccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHHHHhhhhh
Q 018502 41 THGIHVFHCP---DEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNA 115 (355)
Q Consensus 41 ~~~ILTV~Gp---Dr~GIVA~VS~~La~~g~NIld~~q~id~~~g~F~Mr~~v~~~~~~~~~~~L~~~l~~la~~lg~ 115 (355)
+-.+++++|. ++||+.+++.+.|+++|+||.-++.. .. .+.+.+ +.+...++++.+-+.|.+
T Consensus 343 ~~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~~is~S-----e~-~is~vV-------~~~d~~~Av~~Lh~~f~~ 407 (421)
T 3ab4_A 343 QVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIELISTS-----EI-RISVLI-------REDDLDAAARALHEQFQL 407 (421)
T ss_dssp CEEEEEEECGGGTSCTTHHHHHHHHHHHTTCCCCEEEEE-----TT-EEEEEE-------EGGGHHHHHHHHHHHTTC
T ss_pred CeEEEEEEccCcccCccHHHHHHHHHHHCCCCEEEEEcC-----CC-eEEEEE-------eHHHHHHHHHHHHHHHhc
Confidence 5578999996 79999999999999999999876532 11 223333 235578888888888865
No 93
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis}
Probab=68.56 E-value=8.6 Score=39.86 Aligned_cols=114 Identities=14% Similarity=0.082 Sum_probs=69.8
Q ss_pred EEEEEEc-CCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHHHHhhh-------h
Q 018502 43 GIHVFHC-PDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMF-------N 114 (355)
Q Consensus 43 ~ILTV~G-pDr~GIVA~VS~~La~~g~NIld~~q~id~~~g~F~Mr~~v~~~~~~~~~~~L~~~l~~la~~l-------g 114 (355)
..+++.+ +|++|+.++|-+.|+++|+|+.-+.|... .+|.-. +.|.++.. +.+...+.++++..++ +
T Consensus 271 ~~i~i~~~~~~~g~~~~if~~La~~~I~Vd~I~qs~~-~~~~~~--Isftv~~~--~~~~a~~~l~~~~~el~~~~~~~~ 345 (600)
T 3l76_A 271 AKVALLRVPDRPGVASKLFRDIAQQQVDIDLIIQSIH-DGNSND--IAFTVVKD--LLNTAEAVTSAIAPALRSYPEADQ 345 (600)
T ss_dssp EEEEEEEEECSTTHHHHHHHHHHHTTCCCCCEEBCCC-BTTEEE--EEEEECGG--GHHHHHHHHHHHGGGGSSSTTCSS
T ss_pred EEEEEeCCCCcccHHHHHHHHHHHcCCCEEEEEeecc-CCCCce--EEEEEeHH--HHHHHHHHHHHHHHHhhccccccC
Confidence 4567666 79999999999999999999988888642 245433 33444432 4566677777777776 3
Q ss_pred hccceeeeCCCCCCceEEEEEeCCc---hhHHHHHhhhhcCCC--------CeEEEEEEeCC
Q 018502 115 AMRSVVRVPDIDPKYKVAVLASKQE---HCLVDFLYGWQEGKL--------PVEITCVISNH 165 (355)
Q Consensus 115 ~~~~~~~~~~~~~~~riavl~S~~g---~~L~~ll~~~~~~~l--------~~eI~~Vis~~ 165 (355)
.. ++.-.+..-+|++.+.+.. ..+..+...+..... ...|+++|...
T Consensus 346 ~~----~v~~~~~~a~VsvVG~gm~~~~Gv~a~if~aL~~~~Ini~~istSe~~Is~vI~~~ 403 (600)
T 3l76_A 346 EA----EIIVEKGIAKIAIAGAGMIGRPGIAAKMFKTLADVGVNIEMISTSEVKVSCVIDQR 403 (600)
T ss_dssp SS----EEEEECSEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCCCEEEECSSEEEEEEEGG
T ss_pred cc----eeEecCCeEEEEEECCCcccCccHHHHHHHHHHhCCCcEEEEecCCCEEEEEEcHH
Confidence 21 1222345567887776442 233444444433322 24566666544
No 94
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=68.41 E-value=13 Score=34.77 Aligned_cols=74 Identities=20% Similarity=0.166 Sum_probs=41.9
Q ss_pred CceEEEEEeCCchhHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeCCCCChhHHHHHHHhcCCCE
Q 018502 128 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTDF 207 (355)
Q Consensus 128 ~~riavl~S~~g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l~~~Dl 207 (355)
+.||+|++.|.-. ...+..+ ...+++++|+...+........+.++++|++...+.. -+++++- .++|.
T Consensus 2 ~~rvgiiG~G~~~--~~~~~~l---~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ll~~-~~vD~ 70 (337)
T 3ip3_A 2 SLKICVIGSSGHF--RYALEGL---DEECSITGIAPGVPEEDLSKLEKAISEMNIKPKKYNN-----WWEMLEK-EKPDI 70 (337)
T ss_dssp CEEEEEECSSSCH--HHHHTTC---CTTEEEEEEECSSTTCCCHHHHHHHHTTTCCCEECSS-----HHHHHHH-HCCSE
T ss_pred ceEEEEEccchhH--HHHHHhc---CCCcEEEEEecCCchhhHHHHHHHHHHcCCCCcccCC-----HHHHhcC-CCCCE
Confidence 5799999875422 2344444 2258999988754311233566777788884333321 1233321 16888
Q ss_pred EEEEe
Q 018502 208 LVLAR 212 (355)
Q Consensus 208 ivla~ 212 (355)
|+++.
T Consensus 71 V~I~t 75 (337)
T 3ip3_A 71 LVINT 75 (337)
T ss_dssp EEECS
T ss_pred EEEeC
Confidence 87763
No 95
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum}
Probab=67.81 E-value=10 Score=37.90 Aligned_cols=62 Identities=11% Similarity=0.064 Sum_probs=46.3
Q ss_pred ccEEEEEEcCC---ccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHHHHhhh
Q 018502 41 THGIHVFHCPD---EVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMF 113 (355)
Q Consensus 41 ~~~ILTV~GpD---r~GIVA~VS~~La~~g~NIld~~q~id~~~g~F~Mr~~v~~~~~~~~~~~L~~~l~~la~~l 113 (355)
.-.+++++|.. ++|+.+++.+.|+++|+||.-++|-.. . -.+.+.++ .+...++++.+-++|
T Consensus 373 ~vA~VSvVG~gM~~~~Gvaarif~aLa~~~InI~mIsqgtS---e-i~Is~vV~-------~~d~~~Av~aLH~~f 437 (446)
T 3tvi_A 373 NMALVATVGTGMAKTKGIANKIFTALSKENVNIRMIDQGSS---E-INVIVGVE-------TVDFEKAVKSIYNAF 437 (446)
T ss_dssp EEEEEEEECGGGSSCTTHHHHHHHHHHHTTCCEEEEEECSC---T-TEEEEEEE-------GGGHHHHHHHHHHHH
T ss_pred CeEEEEEECCCccCChhHHHHHHHHHHHCCCCEEEEEecCC---C-ceEEEEEc-------HHHHHHHHHHHHHHH
Confidence 56899999975 899999999999999999999998532 1 12333332 355677777776666
No 96
>2fhm_A Probable acylphosphatase; hydrolase; NMR {Bacillus subtilis} PDB: 2hlt_A 2hlu_A 3br8_A
Probab=65.92 E-value=15 Score=28.46 Aligned_cols=58 Identities=17% Similarity=0.083 Sum_probs=44.6
Q ss_pred HHHHHHHHHhhhhhccceeeeCCCCCCceEEEEEeCCchhHHHHHhhhhcCCCCeEEEEEEe
Q 018502 102 MDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVIS 163 (355)
Q Consensus 102 L~~~l~~la~~lg~~~~~~~~~~~~~~~riavl~S~~g~~L~~ll~~~~~~~l~~eI~~Vis 163 (355)
++.-...+|.++|+.-|..+..| - +|-+.+.|....+.+++..++.|..++.|..|-.
T Consensus 17 FR~~v~~~A~~lgl~G~V~N~~d--G--~Vei~~eG~~~~i~~f~~~l~~~~p~a~V~~v~~ 74 (91)
T 2fhm_A 17 FRYFVQMEADKRKLAGWVKNRDD--G--RVEILAEGPENALQSFVEAVKNGSPFSKVTDISV 74 (91)
T ss_dssp HHHHHHHHHHHTTCEEEEEECTT--S--CEEEEEEECHHHHHHHHHHHHTTCSSSEEEEEEE
T ss_pred HHHHHHHHHHHcCCeEEEEECCC--C--cEEEEEEeCHHHHHHHHHHHHhCCCccEEEEEEE
Confidence 57777888999999876544332 2 7888888888889999999888866688877743
No 97
>1js1_X Transcarbamylase; alpha/beta topology, two domains, transferase; 2.00A {Bacteroides fragilis} SCOP: c.78.1.1 c.78.1.1 PDB: 2fg6_X* 2fg7_X* 2g7m_X*
Probab=65.09 E-value=40 Score=32.41 Aligned_cols=114 Identities=11% Similarity=0.134 Sum_probs=69.7
Q ss_pred CchhHHHHHhhhh----cC--CCCeEEEEEEeCCCCCCC----chHHHHHHHCCCCeEEeCCCCChhH----------HH
Q 018502 138 QEHCLVDFLYGWQ----EG--KLPVEITCVISNHDRGPN----SHVIRFLERHGIPYHYLCAKENERE----------EE 197 (355)
Q Consensus 138 ~g~~L~~ll~~~~----~~--~l~~eI~~Vis~~~~~~~----~~v~~~a~~~gIP~~~~~~~~~~~~----------~~ 197 (355)
..|..|.|++.+. .| .+. +...+..|++-.+ .+....+...|+-+..+..+.-... .+
T Consensus 145 ~~HPtQaLaDl~Ti~e~~g~~~l~--l~ia~a~~~~vGD~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~~d 222 (324)
T 1js1_X 145 TRHPLQSFADLITIEEYKKTARPK--VVMTWAPHPRPLPQAVPNSFAEWMNATDYEFVITHPEGYELDPKFVGNARVEYD 222 (324)
T ss_dssp SCCHHHHHHHHHHHHHHCSSSSCE--EEEECCCCSSCCCSHHHHHHHHHHHTSSSEEEEECCTTCCCCHHHHTTCEEESC
T ss_pred CCCcHHHHHHHHHHHHHcCCCCee--EEEEEEcccccCCcchHHHHHHHHHHCCCEEEEeCCcccCCChhhccceEEECC
Confidence 3577777766521 25 443 5445533432221 2567778889998877664321111 12
Q ss_pred HHHHhcCCCEEEEEeeccccchhhHhhhhhhhhhhh--cccCcccccccccCChHHHhhcCCCeEEecCCCCCCCCC
Q 018502 198 LLELVQNTDFLVLARYMQPVPLQKEAYLGYKLLESL--SSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKG 272 (355)
Q Consensus 198 ~~~~l~~~Dlivla~y~~~~~~~~~~~~~~~~~~~~--~~~~~~s~y~~~il~~~~l~~~~~~~INiHpslLP~yrG 272 (355)
+.+.++++|+|.+-+|.+ ..+.. ++..+ +-+|.+..+.++..+ .++=.|| ||++||
T Consensus 223 ~~eav~~aDvvy~~~w~s-------------~g~~~~~~~~~r---~~~y~vt~e~l~~a~-~ai~MHc--LP~~Rg 280 (324)
T 1js1_X 223 QMKAFEGADFIYAKNWAA-------------YTGDNYGQILST---DRNWTVGDRQMAVTN-NAYFMHC--LPVRRN 280 (324)
T ss_dssp HHHHHTTCSEEEECCCCC-------------CSTTCTTCCCCC---CTTSSBCHHHHTTSS-SCEEECC--SCCCBT
T ss_pred HHHHhCCCCEEEecCccc-------------CCCccccchHHH---hcCcccCHHHHHhcC-CcEEECC--CCCCCC
Confidence 345566899998888854 01111 22222 467899999999988 9999998 599976
No 98
>3a06_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; MEP pathway, isoprene biosynthesis, metal- NADP, oxidoreductase; HET: NDP; 2.00A {Thermotoga maritima} PDB: 3a14_A*
Probab=64.88 E-value=9.8 Score=37.57 Aligned_cols=76 Identities=8% Similarity=0.142 Sum_probs=48.8
Q ss_pred ceEEEEEe-CC-chhHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeCCCCChh---------HHH
Q 018502 129 YKVAVLAS-KQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENER---------EEE 197 (355)
Q Consensus 129 ~riavl~S-~~-g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~---------~~~ 197 (355)
+||+|++| |+ |..-.+++.+. . ..+++++..++. -.-+.+.|++++..+..+....... .+.
T Consensus 4 k~i~ILGsTGSIG~~tldVi~~~--~--~~~vvaL~a~~n---~~~l~~q~~~f~p~~v~v~~~~~~~~~l~~~~~G~~~ 76 (376)
T 3a06_A 4 RTLVILGATGSIGTQTLDVLKKV--K--GIRLIGISFHSN---LELAFKIVKEFNVKNVAITGDVEFEDSSINVWKGSHS 76 (376)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHS--C--SEEEEEEEESSC---HHHHHHHHHHHTCCEEEECSSCCCCCSSSEEEESTTH
T ss_pred ceEEEECCCCHHHHHHHHHHHhC--C--CeEEEEEEccCC---HHHHHHHHHHcCCCEEEEccHHHHHHHHHHHccCHHH
Confidence 79999996 55 44444555542 2 489998877652 2457888999998887665322110 234
Q ss_pred HHHHhc--CCCEEEEE
Q 018502 198 LLELVQ--NTDFLVLA 211 (355)
Q Consensus 198 ~~~~l~--~~Dlivla 211 (355)
+.+++. ++|+++.+
T Consensus 77 l~el~~~~~~D~Vv~A 92 (376)
T 3a06_A 77 IEEMLEALKPDITMVA 92 (376)
T ss_dssp HHHHHHHHCCSEEEEC
T ss_pred HHHHhcCCCCCEEEEE
Confidence 555554 69999876
No 99
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=64.57 E-value=8.1 Score=36.36 Aligned_cols=70 Identities=17% Similarity=0.254 Sum_probs=40.0
Q ss_pred CCCceEEEEEeCC-chhHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeCCCCChhHHHHHHHhc-
Q 018502 126 DPKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ- 203 (355)
Q Consensus 126 ~~~~riavl~S~~-g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l~- 203 (355)
.+++||+|++.|. |... +..+....-.+++++|+...+ ....++++++|++.+ .. +.+++.
T Consensus 11 ~~~~rvgiiG~G~~g~~~---~~~l~~~~~~~~lvav~d~~~----~~~~~~~~~~~~~~~--~~--------~~~ll~~ 73 (354)
T 3q2i_A 11 DRKIRFALVGCGRIANNH---FGALEKHADRAELIDVCDIDP----AALKAAVERTGARGH--AS--------LTDMLAQ 73 (354)
T ss_dssp SSCEEEEEECCSTTHHHH---HHHHHHTTTTEEEEEEECSSH----HHHHHHHHHHCCEEE--SC--------HHHHHHH
T ss_pred CCcceEEEEcCcHHHHHH---HHHHHhCCCCeEEEEEEcCCH----HHHHHHHHHcCCcee--CC--------HHHHhcC
Confidence 4678999999875 3322 222222112488888875432 346677888888443 21 222333
Q ss_pred -CCCEEEEEe
Q 018502 204 -NTDFLVLAR 212 (355)
Q Consensus 204 -~~Dlivla~ 212 (355)
++|+++++.
T Consensus 74 ~~~D~V~i~t 83 (354)
T 3q2i_A 74 TDADIVILTT 83 (354)
T ss_dssp CCCSEEEECS
T ss_pred CCCCEEEECC
Confidence 677777654
No 100
>3kzn_A Aotcase, N-acetylornithine carbamoyltransferase; transcarbamylase, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: KCX AOR; 1.80A {Xanthomonas campestris PV} PDB: 3kzc_A* 3kzm_A* 3kzk_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 3l05_A* 3l02_A* 3m4n_A* 3l06_A* 3l04_A*
Probab=62.65 E-value=26 Score=33.98 Aligned_cols=60 Identities=8% Similarity=0.080 Sum_probs=35.5
Q ss_pred HHHhcCCCEEEEEeeccccchhhHhhhhhhhhhhhcccC-cccccccccCChHHHhhcCCCeEEecCCCCCCCCC
Q 018502 199 LELVQNTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKG-SLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKG 272 (355)
Q Consensus 199 ~~~l~~~Dlivla~y~~~~~~~~~~~~~~~~~~~~~~~~-~~s~y~~~il~~~~l~~~~~~~INiHpslLP~yrG 272 (355)
.+.+.++|+|.+-+|.. |-+. ...+... ....|-.|.+.+++++.-+ .+|=.||. |.+||
T Consensus 260 ~eav~~aDvvyt~r~q~------~r~~-----~~~~~~~~~~~~~~~y~v~~~l~~~~~-~ai~MHpl--P~~Rg 320 (359)
T 3kzn_A 260 DSAYAGADVVYAKSWGA------LPFF-----GNWEPEKPIRDQYQHFIVDERKMALTN-NGVFSHCL--PLRRN 320 (359)
T ss_dssp HHHHTTCSEEEEECCCC------GGGT-----TCCTTHHHHHGGGGGGSBCHHHHHTSS-SCEEECCS--CCCBT
T ss_pred HHHhcCCeEEEEEEEEE------eecc-----cchhhhHHHHHHHhccChHHHHhcCCC-CCEEECCC--CCCCC
Confidence 34555899999988853 1100 0000000 1122345678888887654 67889985 99988
No 101
>1rwu_A Hypothetical UPF0250 protein YBED; mixed alpha-beta fold, structural genomics, protein structure initiative, PSI; NMR {Escherichia coli} SCOP: d.58.54.1
Probab=61.65 E-value=40 Score=27.41 Aligned_cols=63 Identities=13% Similarity=0.010 Sum_probs=46.6
Q ss_pred ccEEEEEEcCCccchHHHHHHHHHhc---CCeEeEeeeeccCCCCeEE-EEEEEEeCCCCCChHHHHHHHHHHHh
Q 018502 41 THGIHVFHCPDEVGIVAKLSECIASR---GGNILAADVFVPEKKNVFY-SRSEFIFDPIKWPREQMDEDFFKLSK 111 (355)
Q Consensus 41 ~~~ILTV~GpDr~GIVA~VS~~La~~---g~NIld~~q~id~~~g~F~-Mr~~v~~~~~~~~~~~L~~~l~~la~ 111 (355)
..+-+.|+|++..+.+++|-..+.++ +..+ ..+. ...|.|. ..+.+.+. +.+++.+-.++|++
T Consensus 35 c~y~~KvIG~a~~~~~~~V~~vv~~~~p~d~~~-~~r~---Ss~GkY~Svtv~v~v~----S~eQv~aiY~~L~~ 101 (109)
T 1rwu_A 35 TPFTYKVMGQALPELVDQVVEVVQRHAPGDYTP-TVKP---SSKGNYHSVSITINAT----HIEQVETLYEELGK 101 (109)
T ss_dssp CCEEEEEEEECCTTHHHHHHHHHHHHSSSCCCE-EEEE---SSCSSEEEEEEEECCS----SHHHHHHHHHHHSC
T ss_pred CCceEEEEEECcHHHHHHHHHHHHHhCCCCCCc-eecC---CCCCeEEEEEEEEEEC----CHHHHHHHHHHHhc
Confidence 36888999999999999999999988 6776 4333 4478887 34444333 57888888887754
No 102
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=59.61 E-value=28 Score=32.83 Aligned_cols=71 Identities=13% Similarity=0.152 Sum_probs=40.7
Q ss_pred CCceEEEEEeCC-chhHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeCCCCChhHHHHHHHhc--
Q 018502 127 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ-- 203 (355)
Q Consensus 127 ~~~riavl~S~~-g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l~-- 203 (355)
++.||+|++.|. |. ..+..+....-.+++++|+...+ ....++++++|++...+.. +.+++.
T Consensus 22 ~~~rvgiIG~G~~g~---~~~~~l~~~~~~~~lvav~d~~~----~~~~~~a~~~g~~~~~~~~--------~~~ll~~~ 86 (357)
T 3ec7_A 22 MTLKAGIVGIGMIGS---DHLRRLANTVSGVEVVAVCDIVA----GRAQAALDKYAIEAKDYND--------YHDLINDK 86 (357)
T ss_dssp CCEEEEEECCSHHHH---HHHHHHHHTCTTEEEEEEECSST----THHHHHHHHHTCCCEEESS--------HHHHHHCT
T ss_pred CeeeEEEECCcHHHH---HHHHHHHhhCCCcEEEEEEeCCH----HHHHHHHHHhCCCCeeeCC--------HHHHhcCC
Confidence 467999998765 22 22333321112488988876542 3567788999964333321 223343
Q ss_pred CCCEEEEEe
Q 018502 204 NTDFLVLAR 212 (355)
Q Consensus 204 ~~Dlivla~ 212 (355)
++|+++++.
T Consensus 87 ~~D~V~i~t 95 (357)
T 3ec7_A 87 DVEVVIITA 95 (357)
T ss_dssp TCCEEEECS
T ss_pred CCCEEEEcC
Confidence 578877764
No 103
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=59.18 E-value=11 Score=35.07 Aligned_cols=70 Identities=19% Similarity=0.248 Sum_probs=40.8
Q ss_pred CceEEEEEeCCchhHHHHHhhhhc-CCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeCCCCChhHHHHHHHhc--C
Q 018502 128 KYKVAVLASKQEHCLVDFLYGWQE-GKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ--N 204 (355)
Q Consensus 128 ~~riavl~S~~g~~L~~ll~~~~~-~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l~--~ 204 (355)
+.||+|++.|.- -...+..++. +...+++++|.+.. .....++|+++|+|-.+ . .+.+++. +
T Consensus 2 ~~rigiiG~G~i--g~~~~~~l~~~~~~~~~l~av~d~~----~~~a~~~a~~~~~~~~~-~--------~~~~ll~~~~ 66 (334)
T 3ohs_X 2 ALRWGIVSVGLI--SSDFTAVLQTLPRSEHQVVAVAARD----LSRAKEFAQKHDIPKAY-G--------SYEELAKDPN 66 (334)
T ss_dssp CEEEEEECCSHH--HHHHHHHHTTSCTTTEEEEEEECSS----HHHHHHHHHHHTCSCEE-S--------SHHHHHHCTT
T ss_pred ccEEEEECchHH--HHHHHHHHHhCCCCCeEEEEEEcCC----HHHHHHHHHHcCCCccc-C--------CHHHHhcCCC
Confidence 479999987652 1223333322 11236899887643 23567889999998543 1 1233443 5
Q ss_pred CCEEEEEe
Q 018502 205 TDFLVLAR 212 (355)
Q Consensus 205 ~Dlivla~ 212 (355)
+|+|+++.
T Consensus 67 vD~V~i~t 74 (334)
T 3ohs_X 67 VEVAYVGT 74 (334)
T ss_dssp CCEEEECC
T ss_pred CCEEEECC
Confidence 78887764
No 104
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=58.82 E-value=26 Score=32.68 Aligned_cols=71 Identities=11% Similarity=0.095 Sum_probs=40.5
Q ss_pred CceEEEEEeCCchhHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeCCCCChhHHHHHHHhc--CC
Q 018502 128 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ--NT 205 (355)
Q Consensus 128 ~~riavl~S~~g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l~--~~ 205 (355)
+.||+|++.|.- -...+..+......+++++|+... .....++++++|++...+.. +.+++. ++
T Consensus 2 ~~rigiIG~G~~--g~~~~~~l~~~~~~~~l~av~d~~----~~~~~~~~~~~g~~~~~~~~--------~~~ll~~~~~ 67 (344)
T 3mz0_A 2 SLRIGVIGTGAI--GKEHINRITNKLSGAEIVAVTDVN----QEAAQKVVEQYQLNATVYPN--------DDSLLADENV 67 (344)
T ss_dssp CEEEEEECCSHH--HHHHHHHHHHTCSSEEEEEEECSS----HHHHHHHHHHTTCCCEEESS--------HHHHHHCTTC
T ss_pred eEEEEEECccHH--HHHHHHHHHhhCCCcEEEEEEcCC----HHHHHHHHHHhCCCCeeeCC--------HHHHhcCCCC
Confidence 479999987651 122333333111258888876543 23467788999975433331 223343 57
Q ss_pred CEEEEEe
Q 018502 206 DFLVLAR 212 (355)
Q Consensus 206 Dlivla~ 212 (355)
|+++++.
T Consensus 68 D~V~i~t 74 (344)
T 3mz0_A 68 DAVLVTS 74 (344)
T ss_dssp CEEEECS
T ss_pred CEEEECC
Confidence 8887764
No 105
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=58.64 E-value=12 Score=35.91 Aligned_cols=74 Identities=12% Similarity=0.128 Sum_probs=42.7
Q ss_pred CCCceEEEEEeCC-chh-HHHHHhhhh-cCCC--CeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeCCCCChhHHHHHH
Q 018502 126 DPKYKVAVLASKQ-EHC-LVDFLYGWQ-EGKL--PVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLE 200 (355)
Q Consensus 126 ~~~~riavl~S~~-g~~-L~~ll~~~~-~~~l--~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~ 200 (355)
++|.||+|++.|. |.. +..+...-. ...+ .++|++|+... .....++|+++|+|-.+-+ +.+
T Consensus 24 s~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~----~~~a~~~a~~~~~~~~y~d---------~~~ 90 (412)
T 4gqa_A 24 SARLNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQD----QAMAERHAAKLGAEKAYGD---------WRE 90 (412)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSS----HHHHHHHHHHHTCSEEESS---------HHH
T ss_pred cccceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCC----HHHHHHHHHHcCCCeEECC---------HHH
Confidence 4678999998875 221 222222100 0111 47899887543 2357788999999854421 233
Q ss_pred Hhc--CCCEEEEEe
Q 018502 201 LVQ--NTDFLVLAR 212 (355)
Q Consensus 201 ~l~--~~Dlivla~ 212 (355)
+|. ++|+|+++.
T Consensus 91 ll~~~~vD~V~I~t 104 (412)
T 4gqa_A 91 LVNDPQVDVVDITS 104 (412)
T ss_dssp HHHCTTCCEEEECS
T ss_pred HhcCCCCCEEEECC
Confidence 443 688887764
No 106
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=58.35 E-value=23 Score=33.54 Aligned_cols=70 Identities=11% Similarity=0.105 Sum_probs=41.0
Q ss_pred CCceEEEEEeCCchhHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeCCCCChhHHHHHHHhc--C
Q 018502 127 PKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ--N 204 (355)
Q Consensus 127 ~~~riavl~S~~g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l~--~ 204 (355)
++.||+|++.|..+. ..++..++.. .+++++|+.... ....++|+++|++-.+-+ +.+++. +
T Consensus 25 ~~irvgiiG~G~~~~-~~~~~~~~~~--~~~lvav~d~~~----~~a~~~a~~~~~~~~~~~---------~~~ll~~~~ 88 (361)
T 3u3x_A 25 DELRFAAVGLNHNHI-YGQVNCLLRA--GARLAGFHEKDD----ALAAEFSAVYADARRIAT---------AEEILEDEN 88 (361)
T ss_dssp -CCEEEEECCCSTTH-HHHHHHHHHT--TCEEEEEECSCH----HHHHHHHHHSSSCCEESC---------HHHHHTCTT
T ss_pred cCcEEEEECcCHHHH-HHHHHHhhcC--CcEEEEEEcCCH----HHHHHHHHHcCCCcccCC---------HHHHhcCCC
Confidence 357999999887542 1222222222 489999886542 346778899986543311 233444 4
Q ss_pred CCEEEEEe
Q 018502 205 TDFLVLAR 212 (355)
Q Consensus 205 ~Dlivla~ 212 (355)
+|+|+++.
T Consensus 89 vD~V~I~t 96 (361)
T 3u3x_A 89 IGLIVSAA 96 (361)
T ss_dssp CCEEEECC
T ss_pred CCEEEEeC
Confidence 77777653
No 107
>1ulr_A Putative acylphosphatase; hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: d.58.10.1
Probab=57.32 E-value=31 Score=26.58 Aligned_cols=59 Identities=19% Similarity=0.132 Sum_probs=44.3
Q ss_pred HHHHHHHHHHhhhhhccceeeeCCCCCCceEEEEEeCCchhHHHHHhhhhcCCCCeEEEEEEe
Q 018502 101 QMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVIS 163 (355)
Q Consensus 101 ~L~~~l~~la~~lg~~~~~~~~~~~~~~~riavl~S~~g~~L~~ll~~~~~~~l~~eI~~Vis 163 (355)
-++.-...+|.++|+.-|..+..| - +|-+.+.|....+.+++..++.|...+.|..|-.
T Consensus 16 GFR~~v~~~A~~lgl~G~V~N~~d--G--~Vei~~eG~~~~i~~f~~~l~~gP~~a~V~~v~~ 74 (88)
T 1ulr_A 16 GYRAFAQKKALELGLSGYAENLPD--G--RVEVVAEGPKEALELFLHHLKQGPRLARVEAVEV 74 (88)
T ss_dssp SHHHHHHHHHHHTTCEEEEEECTT--S--CEEEEEESCHHHHHHHHHHHHHCSTTCEEEEEEE
T ss_pred CHHHHHHHHHHHcCCeEEEEECCC--C--cEEEEEEeCHHHHHHHHHHHHhCCCCcEEEEEEE
Confidence 367777888999999876544332 2 7888999988889999998887755588877643
No 108
>3mah_A Aspartokinase; aspartate kinase, structural genomics, MCSG, transferase, PSI-2; 2.31A {Porphyromonas gingivalis}
Probab=57.25 E-value=13 Score=31.15 Aligned_cols=62 Identities=16% Similarity=0.089 Sum_probs=43.0
Q ss_pred ccEEEEEEcC---CccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHHHHhhhhh
Q 018502 41 THGIHVFHCP---DEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNA 115 (355)
Q Consensus 41 ~~~ILTV~Gp---Dr~GIVA~VS~~La~~g~NIld~~q~id~~~g~F~Mr~~v~~~~~~~~~~~L~~~l~~la~~lg~ 115 (355)
.-.+++++|. ++||+.+++.+.|+ |+||.-++|... +. .+.+.++ .++..++++.+-++|..
T Consensus 87 ~~a~vsvvG~gm~~~~gv~a~~f~aL~--~Ini~~isqg~S---e~-~is~vv~-------~~d~~~a~~~Lh~~f~~ 151 (157)
T 3mah_A 87 DMVIICIVGDMEWDNVGFEARIINALK--GVPVRMISYGGS---NY-NVSVLVK-------AEDKKKALIALSNKLFN 151 (157)
T ss_dssp EEEEEEEEC------CCHHHHHHHTTT--TSCCSEEEECSS---SS-CEEEEEE-------GGGHHHHHHHHHHHHHC
T ss_pred CeEEEEEECCCcccCccHHHHHHHHhC--CCCeEEEeeCCC---CC-EEEEEEc-------HHHHHHHHHHHHHHHhc
Confidence 5589999997 57899999999999 999999998532 11 2233332 35567777777777754
No 109
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=56.53 E-value=16 Score=34.21 Aligned_cols=71 Identities=23% Similarity=0.195 Sum_probs=41.0
Q ss_pred CCCCceEEEEEeC-C-chh-HHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeCCCCChhHHHHHHH
Q 018502 125 IDPKYKVAVLASK-Q-EHC-LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLEL 201 (355)
Q Consensus 125 ~~~~~riavl~S~-~-g~~-L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~ 201 (355)
..++.||+|++.| . |.. +..+ .. .+ -.+++++|+.... ....++++++|+|-.+-+ +.++
T Consensus 15 ~~~~irvgiIG~G~~~g~~~~~~l-~~--~~-~~~~lvav~d~~~----~~~~~~a~~~~~~~~~~~---------~~~l 77 (340)
T 1zh8_A 15 PLRKIRLGIVGCGIAARELHLPAL-KN--LS-HLFEITAVTSRTR----SHAEEFAKMVGNPAVFDS---------YEEL 77 (340)
T ss_dssp -CCCEEEEEECCSHHHHHTHHHHH-HT--TT-TTEEEEEEECSSH----HHHHHHHHHHSSCEEESC---------HHHH
T ss_pred CCCceeEEEEecCHHHHHHHHHHH-Hh--CC-CceEEEEEEcCCH----HHHHHHHHHhCCCcccCC---------HHHH
Confidence 4567899999887 2 322 3332 21 11 2488988876432 346778888998644311 2334
Q ss_pred hc--CCCEEEEEe
Q 018502 202 VQ--NTDFLVLAR 212 (355)
Q Consensus 202 l~--~~Dlivla~ 212 (355)
+. ++|+|+++.
T Consensus 78 l~~~~vD~V~i~t 90 (340)
T 1zh8_A 78 LESGLVDAVDLTL 90 (340)
T ss_dssp HHSSCCSEEEECC
T ss_pred hcCCCCCEEEEeC
Confidence 43 578777764
No 110
>1phz_A Protein (phenylalanine hydroxylase); aromatic amino acid hydroxylase, phosphorylation, intrasteric regulation, allosteric regulation; 2.20A {Rattus norvegicus} SCOP: d.58.18.3 d.178.1.1 PDB: 2phm_A
Probab=55.46 E-value=25 Score=35.33 Aligned_cols=65 Identities=17% Similarity=0.050 Sum_probs=42.5
Q ss_pred EEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHHHHhh
Q 018502 43 GIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKM 112 (355)
Q Consensus 43 ~ILTV~GpDr~GIVA~VS~~La~~g~NIld~~q~id~~~g~F~Mr~~v~~~~~~~~~~~L~~~l~~la~~ 112 (355)
.++++ +|+||-.+++=+.++.+|+|+..+...-.. .+.+--..-+|++ ..+-+.++++|+++.+.
T Consensus 37 LiFsl--~n~pGAL~~~L~~Fa~~gINLTkIESRPsk-~~~~eY~FfVD~e--h~~d~~v~~AL~eL~~~ 101 (429)
T 1phz_A 37 LIFSL--KEEVGALAKVLRLFEENDINLTHIESRPSR-LNKDEYEFFTYLD--KRTKPVLGSIIKSLRND 101 (429)
T ss_dssp EEEEE--ECCTTHHHHHHHHHHTTTCCTTSEEEEECS-SCTTEEEEEECBC--GGGHHHHHHHHHHHHHT
T ss_pred EEEEe--CCCccHHHHHHHHHHHcCCceEEEEeeecC-CCCccEEEEEEEe--eCCCHHHHHHHHHHHhh
Confidence 44444 899999999999999999999977664211 1112223334444 22345688888887654
No 111
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=54.94 E-value=20 Score=33.32 Aligned_cols=69 Identities=17% Similarity=0.307 Sum_probs=40.2
Q ss_pred CCceEEEEEeCC-chhHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeCCCCChhHHHHHHHhc--
Q 018502 127 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ-- 203 (355)
Q Consensus 127 ~~~riavl~S~~-g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l~-- 203 (355)
+++||+|++.|. |..+ +..++.- -..++++|+... .....++++++|+|..+ . ++.+++.
T Consensus 4 ~~~~igiiG~G~~g~~~---~~~l~~~-~~~~l~av~d~~----~~~~~~~~~~~~~~~~~-~--------~~~~ll~~~ 66 (330)
T 3e9m_A 4 DKIRYGIMSTAQIVPRF---VAGLRES-AQAEVRGIASRR----LENAQKMAKELAIPVAY-G--------SYEELCKDE 66 (330)
T ss_dssp CCEEEEECSCCTTHHHH---HHHHHHS-SSEEEEEEBCSS----SHHHHHHHHHTTCCCCB-S--------SHHHHHHCT
T ss_pred CeEEEEEECchHHHHHH---HHHHHhC-CCcEEEEEEeCC----HHHHHHHHHHcCCCcee-C--------CHHHHhcCC
Confidence 468999998876 3322 2222221 147888876543 23567888999987432 1 1223333
Q ss_pred CCCEEEEEe
Q 018502 204 NTDFLVLAR 212 (355)
Q Consensus 204 ~~Dlivla~ 212 (355)
++|+|+++.
T Consensus 67 ~~D~V~i~t 75 (330)
T 3e9m_A 67 TIDIIYIPT 75 (330)
T ss_dssp TCSEEEECC
T ss_pred CCCEEEEcC
Confidence 577777654
No 112
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=54.02 E-value=13 Score=34.61 Aligned_cols=72 Identities=6% Similarity=0.042 Sum_probs=41.9
Q ss_pred CceEEEEEeCC-chh-HHHHHhh--hhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeCCCCChhHHHHHHHhc
Q 018502 128 KYKVAVLASKQ-EHC-LVDFLYG--WQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 203 (355)
Q Consensus 128 ~~riavl~S~~-g~~-L~~ll~~--~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l~ 203 (355)
|.||+|++.|. |.. +..+... ...-...+++++|+...+ ....++|+++|+|-.+-+ +.++|.
T Consensus 6 klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~----~~a~~~a~~~g~~~~~~d---------~~~ll~ 72 (390)
T 4h3v_A 6 NLGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDA----EAVRAAAGKLGWSTTETD---------WRTLLE 72 (390)
T ss_dssp EEEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSH----HHHHHHHHHHTCSEEESC---------HHHHTT
T ss_pred cCcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcCCH----HHHHHHHHHcCCCcccCC---------HHHHhc
Confidence 57999998765 221 2222211 111112468988876432 356788999999965521 334554
Q ss_pred --CCCEEEEEe
Q 018502 204 --NTDFLVLAR 212 (355)
Q Consensus 204 --~~Dlivla~ 212 (355)
++|.|+++.
T Consensus 73 ~~~iDaV~I~t 83 (390)
T 4h3v_A 73 RDDVQLVDVCT 83 (390)
T ss_dssp CTTCSEEEECS
T ss_pred CCCCCEEEEeC
Confidence 688887764
No 113
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=53.82 E-value=27 Score=28.11 Aligned_cols=72 Identities=15% Similarity=0.244 Sum_probs=40.8
Q ss_pred CCCCceEEEEEeCC-chhHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeCCCCChhHHHHHHHh-
Q 018502 125 IDPKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELV- 202 (355)
Q Consensus 125 ~~~~~riavl~S~~-g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l- 202 (355)
.+.+.+|+|++.|. |..+...|.. .| ++++.+=.+. ...+.+++.|+++...+. .+++.++..
T Consensus 4 ~~~~~~viIiG~G~~G~~la~~L~~--~g---~~v~vid~~~------~~~~~~~~~g~~~i~gd~----~~~~~l~~a~ 68 (140)
T 3fwz_A 4 VDICNHALLVGYGRVGSLLGEKLLA--SD---IPLVVIETSR------TRVDELRERGVRAVLGNA----ANEEIMQLAH 68 (140)
T ss_dssp CCCCSCEEEECCSHHHHHHHHHHHH--TT---CCEEEEESCH------HHHHHHHHTTCEEEESCT----TSHHHHHHTT
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHH--CC---CCEEEEECCH------HHHHHHHHcCCCEEECCC----CCHHHHHhcC
Confidence 34467899998765 4555554443 23 5666544332 235556678998866432 223344433
Q ss_pred -cCCCEEEEE
Q 018502 203 -QNTDFLVLA 211 (355)
Q Consensus 203 -~~~Dlivla 211 (355)
.++|++|++
T Consensus 69 i~~ad~vi~~ 78 (140)
T 3fwz_A 69 LECAKWLILT 78 (140)
T ss_dssp GGGCSEEEEC
T ss_pred cccCCEEEEE
Confidence 378988765
No 114
>2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10
Probab=53.57 E-value=18 Score=36.80 Aligned_cols=64 Identities=11% Similarity=0.012 Sum_probs=49.4
Q ss_pred ccEEEEEEcC--CccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHHHHhhhhh
Q 018502 41 THGIHVFHCP--DEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNA 115 (355)
Q Consensus 41 ~~~ILTV~Gp--Dr~GIVA~VS~~La~~g~NIld~~q~id~~~g~F~Mr~~v~~~~~~~~~~~L~~~l~~la~~lg~ 115 (355)
+-++++++|. ..+|+.+++.+.|+++|+||.-++|-.. . -.+.+.+ +.++..+++..+=+.|..
T Consensus 419 ~~a~VsiVG~m~~~~Gvaa~~f~aL~~~~InI~mIsqGsS---e-i~Is~vV-------~~~d~~~Av~aLH~~f~~ 484 (510)
T 2cdq_A 419 GRAIISLIGNVQHSSLILERAFHVLYTKGVNVQMISQGAS---K-VNISFIV-------NEAEAEGCVQALHKSFFE 484 (510)
T ss_dssp EEEEEEEEECGGGHHHHHHHHHHHHHHHTCCCSEEEECTT---C-SEEEEEE-------EHHHHHHHHHHHHHHHHS
T ss_pred CcEEEEEEEECCCChhHHHHHHHHHHHCCCCEEEEEecCC---c-ceEEEEE-------eHHHHHHHHHHHHHHHhc
Confidence 6689999998 6779999999999999999999998422 1 1223333 346788888888888864
No 115
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=53.29 E-value=19 Score=33.42 Aligned_cols=50 Identities=16% Similarity=0.200 Sum_probs=27.4
Q ss_pred CCceEEEEEeCC-chhHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCe
Q 018502 127 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPY 184 (355)
Q Consensus 127 ~~~riavl~S~~-g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~ 184 (355)
++.||+|++.|. |..+...+.. .+ .+++++|+..... ...++++++|+|-
T Consensus 4 ~~~rigiiG~G~ig~~~~~~l~~--~~--~~~~~av~d~~~~----~~~~~a~~~~~~~ 54 (329)
T 3evn_A 4 SKVRYGVVSTAKVAPRFIEGVRL--AG--NGEVVAVSSRTLE----SAQAFANKYHLPK 54 (329)
T ss_dssp -CEEEEEEBCCTTHHHHHHHHHH--HC--SEEEEEEECSCSS----TTCC---CCCCSC
T ss_pred CceEEEEEechHHHHHHHHHHHh--CC--CcEEEEEEcCCHH----HHHHHHHHcCCCc
Confidence 468999999876 3322222221 12 4789988765432 3456778888873
No 116
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=53.05 E-value=15 Score=35.03 Aligned_cols=67 Identities=18% Similarity=0.240 Sum_probs=39.4
Q ss_pred CceEEEEEeC-C-chhHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeCCCCChhHHHHHHHhc--
Q 018502 128 KYKVAVLASK-Q-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ-- 203 (355)
Q Consensus 128 ~~riavl~S~-~-g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l~-- 203 (355)
+.||+|++.| . +......+.. .+ ..++++|+...+ ....++++++|+|.+ .. +.+++.
T Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~--~~--~~~l~av~d~~~----~~~~~~a~~~g~~~~--~~--------~~ell~~~ 63 (387)
T 3moi_A 2 KIRFGICGLGFAGSVLMAPAMRH--HP--DAQIVAACDPNE----DVRERFGKEYGIPVF--AT--------LAEMMQHV 63 (387)
T ss_dssp CEEEEEECCSHHHHTTHHHHHHH--CT--TEEEEEEECSCH----HHHHHHHHHHTCCEE--SS--------HHHHHHHS
T ss_pred ceEEEEEeCCHHHHHHHHHHHHh--CC--CeEEEEEEeCCH----HHHHHHHHHcCCCeE--CC--------HHHHHcCC
Confidence 5799999887 3 2222222222 12 488988876432 246678889999953 21 223333
Q ss_pred CCCEEEEEe
Q 018502 204 NTDFLVLAR 212 (355)
Q Consensus 204 ~~Dlivla~ 212 (355)
++|+|+++.
T Consensus 64 ~vD~V~i~t 72 (387)
T 3moi_A 64 QMDAVYIAS 72 (387)
T ss_dssp CCSEEEECS
T ss_pred CCCEEEEcC
Confidence 578887764
No 117
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A*
Probab=52.69 E-value=35 Score=26.93 Aligned_cols=42 Identities=21% Similarity=0.284 Sum_probs=26.0
Q ss_pred HHHHHHHCCCCe-EEeCCCCChhHHHHHHHhc--CCCEEEEEeecc
Q 018502 173 VIRFLERHGIPY-HYLCAKENEREEELLELVQ--NTDFLVLARYMQ 215 (355)
Q Consensus 173 v~~~a~~~gIP~-~~~~~~~~~~~~~~~~~l~--~~Dlivla~y~~ 215 (355)
+.++++++|++. ...- ......+++.+..+ ++|++|+....+
T Consensus 76 l~~~~~~~~~~~~~~~~-~~g~~~~~I~~~a~~~~~dliV~G~~~~ 120 (150)
T 3tnj_A 76 LSQIGNTLGIDPAHRWL-VWGEPREEIIRIAEQENVDLIVVGSHGR 120 (150)
T ss_dssp HHHHHHHHTCCGGGEEE-EESCHHHHHHHHHHHTTCSEEEEEEC--
T ss_pred HHHHHHHcCCCcceEEE-ecCCHHHHHHHHHHHcCCCEEEEecCCC
Confidence 456777789884 2111 11234467777776 899999987765
No 118
>3trg_A Acylphosphatase; fatty acid and phospholipid metabolism, hydrolase; 1.60A {Coxiella burnetii}
Probab=51.76 E-value=29 Score=27.47 Aligned_cols=59 Identities=14% Similarity=0.063 Sum_probs=44.5
Q ss_pred HHHHHHHHHHhhhhhccceeeeCCCCCCceEEEEEeCCchhHHHHHhhhhcCCCCeEEEEEEe
Q 018502 101 QMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVIS 163 (355)
Q Consensus 101 ~L~~~l~~la~~lg~~~~~~~~~~~~~~~riavl~S~~g~~L~~ll~~~~~~~l~~eI~~Vis 163 (355)
-++.-...+|.++|+.-|..+..| . +|-+.+.|....+..++..++.|...+.|..|-.
T Consensus 26 GFR~~v~~~A~~lgL~G~VrN~~d--G--~Vei~~eG~~~~l~~f~~~l~~gPp~A~V~~v~~ 84 (98)
T 3trg_A 26 FFRESVRKKAEELQLTGWVKNLSH--G--DVELVACGERDSIMILTEWLWEGPPQAAVSNVNW 84 (98)
T ss_dssp CHHHHHHHHHHHTTCEEEEEECTT--S--CEEEEEEEEHHHHHHHHHHTTTCSTTCEEEEEEE
T ss_pred CccHHHHHHHHHcCCeEEEEECCC--C--EEEEEEEECHHHHHHHHHHHHhCCCCcEEEEEEE
Confidence 367777788999999877654433 2 7888888888889999999887755588877644
No 119
>1w2i_A Acylphosphatase; hydrolase, thermophilic, stability, amyloid; 1.5A {Pyrococcus horikoshii} SCOP: d.58.10.1 PDB: 1v3z_A 2w4d_A
Probab=51.51 E-value=31 Score=26.80 Aligned_cols=59 Identities=14% Similarity=0.085 Sum_probs=43.7
Q ss_pred HHHHHHHHHHhhhhhccceeeeCCCCCCceEEEEEeCCchhHHHHHhhhhcCCCCeEEEEEEe
Q 018502 101 QMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVIS 163 (355)
Q Consensus 101 ~L~~~l~~la~~lg~~~~~~~~~~~~~~~riavl~S~~g~~L~~ll~~~~~~~l~~eI~~Vis 163 (355)
-++.-...+|.++|+.-|..+.. +- +|-+.+.|....+.+++..++.|...+.|..|-.
T Consensus 18 GFR~~v~~~A~~lgL~G~V~N~~--dG--~Vei~~~G~~~~v~~f~~~l~~gP~~a~V~~v~~ 76 (91)
T 1w2i_A 18 GFRWSMQREARKLGVNGWVRNLP--DG--SVEAVLEGDEERVEALIGWAHQGPPLARVTRVEV 76 (91)
T ss_dssp SHHHHHHHHHHHHTCEEEEEECT--TS--CEEEEEEEEHHHHHHHHHHTTTCSTTCEEEEEEE
T ss_pred CHHHHHHHHHHHcCCeEEEEECC--CC--CEEEEEEeCHHHHHHHHHHHHhCCCCcEEEEEEE
Confidence 36777788899999987654333 22 7888888888889999998887755588877643
No 120
>2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10
Probab=51.45 E-value=28 Score=35.37 Aligned_cols=35 Identities=14% Similarity=0.089 Sum_probs=31.4
Q ss_pred cEEEEEEc---CCccchHHHHHHHHHhcCCeEeEeeee
Q 018502 42 HGIHVFHC---PDEVGIVAKLSECIASRGGNILAADVF 76 (355)
Q Consensus 42 ~~ILTV~G---pDr~GIVA~VS~~La~~g~NIld~~q~ 76 (355)
-..|++.| ++++|+.++|-+.|+++|+||.-+.|.
T Consensus 341 ~~~I~i~~~~m~~~~g~~~~if~~la~~~I~vd~I~ss 378 (510)
T 2cdq_A 341 VTMLDIASTRMLGQVGFLAKVFSIFEELGISVDVVATS 378 (510)
T ss_dssp EEEEEEECGGGTTCTTHHHHHHHHHHHTTCCEEEEEEE
T ss_pred eEEEEEEcCCCCCcccHHHHHHHHHHHcCCcEEEEEeC
Confidence 36789988 789999999999999999999999775
No 121
>3a2k_A TRNA(Ile)-lysidine synthase; ligase, pseudo-knot, ligase/RNA complex; 3.65A {Geobacillus kaustophilus}
Probab=51.04 E-value=11 Score=37.64 Aligned_cols=61 Identities=15% Similarity=0.084 Sum_probs=42.2
Q ss_pred CCceEEEEEeCCc--hhHHHHHhhhhcCCCCeEEEEEEeCCCCC-C-----CchHHHHHHHCCCCeEEeC
Q 018502 127 PKYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRG-P-----NSHVIRFLERHGIPYHYLC 188 (355)
Q Consensus 127 ~~~riavl~S~~g--~~L~~ll~~~~~~~l~~eI~~Vis~~~~~-~-----~~~v~~~a~~~gIP~~~~~ 188 (355)
+..||+|.+||.. .+|-.++..++. +.+.++.+|..||.-. . ...+.++|+++|||++...
T Consensus 17 ~~~~vlVa~SGG~DS~~Ll~ll~~~~~-~~~~~v~avhvdhglrg~~s~~~~~~v~~~~~~lgi~~~v~~ 85 (464)
T 3a2k_A 17 EGAAVIVGVSGGPDSLALLHVFLSLRD-EWKLQVIAAHVDHMFRGRESEEEMEFVKRFCVERRILCETAQ 85 (464)
T ss_dssp CSSBEEEECCSSHHHHHHHHHHHHHHH-TTTCBCEEEEEECTTCTHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCEEEEEEcCcHHHHHHHHHHHHHHH-HcCCeEEEEEEECCCCccccHHHHHHHHHHHHHcCCcEEEEE
Confidence 3468999999863 356666665432 2357788888887532 1 1357899999999998765
No 122
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=50.86 E-value=34 Score=34.08 Aligned_cols=53 Identities=8% Similarity=0.073 Sum_probs=30.1
Q ss_pred CCceEEEEEeCC--chhHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCC
Q 018502 127 PKYKVAVLASKQ--EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIP 183 (355)
Q Consensus 127 ~~~riavl~S~~--g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP 183 (355)
++.||+|++.+. |.--...+..++.-.-.+++++|+.... ....++++++|+|
T Consensus 38 ~~irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~~~----~~a~~~a~~~g~~ 92 (479)
T 2nvw_A 38 RPIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTL----KSSLQTIEQLQLK 92 (479)
T ss_dssp CCEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCH----HHHHHHHHHTTCT
T ss_pred CcCEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeCCH----HHHHHHHHHcCCC
Confidence 457999998732 3211122222222101478988776432 3466788889987
No 123
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=50.48 E-value=36 Score=31.52 Aligned_cols=47 Identities=15% Similarity=0.214 Sum_probs=28.8
Q ss_pred CceEEEEEeCCchhHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCC
Q 018502 128 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHG 181 (355)
Q Consensus 128 ~~riavl~S~~g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~g 181 (355)
+.||+|++.|..+. ..++..++.. .+++++|+..... ...+++++++
T Consensus 4 ~~rvgiiG~G~~~~-~~~~~~l~~~--~~~lvav~d~~~~----~~~~~a~~~~ 50 (336)
T 2p2s_A 4 KIRFAAIGLAHNHI-YDMCQQLIDA--GAELAGVFESDSD----NRAKFTSLFP 50 (336)
T ss_dssp CCEEEEECCSSTHH-HHHHHHHHHT--TCEEEEEECSCTT----SCHHHHHHST
T ss_pred ccEEEEECCChHHH-HHhhhhhcCC--CcEEEEEeCCCHH----HHHHHHHhcC
Confidence 57999999876543 1233333222 4899988765432 3467777874
No 124
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=50.16 E-value=28 Score=33.98 Aligned_cols=50 Identities=12% Similarity=0.069 Sum_probs=30.7
Q ss_pred CCceEEEEEe----CC-chhHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCC
Q 018502 127 PKYKVAVLAS----KQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIP 183 (355)
Q Consensus 127 ~~~riavl~S----~~-g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP 183 (355)
++.||+|++. |. |......|.... -.+++++|+.... ....++++++|+|
T Consensus 19 ~~irvgiIG~g~~gG~~g~~~~~~l~~~~---~~~~lvav~d~~~----~~~~~~a~~~g~~ 73 (438)
T 3btv_A 19 APIRVGFVGLNAAKGWAIKTHYPAILQLS---SQFQITALYSPKI----ETSIATIQRLKLS 73 (438)
T ss_dssp CCEEEEEESCCTTSSSTTTTHHHHHHHTT---TTEEEEEEECSSH----HHHHHHHHHTTCT
T ss_pred CCCEEEEEcccCCCChHHHHHHHHHHhcC---CCeEEEEEEeCCH----HHHHHHHHHcCCC
Confidence 3589999998 44 333333333210 1478988875432 2466788899997
No 125
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=49.99 E-value=86 Score=29.06 Aligned_cols=56 Identities=4% Similarity=-0.095 Sum_probs=33.6
Q ss_pred CCCCCceEEEEEeCC-ch--hHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeC
Q 018502 124 DIDPKYKVAVLASKQ-EH--CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (355)
Q Consensus 124 ~~~~~~riavl~S~~-g~--~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~ 188 (355)
....++||+++..+. || .+..|...++.. .++|+.+. .. ...+..++.|+++..++
T Consensus 16 ~~~~m~rIl~~~~~~~GHv~p~l~La~~L~~~--Gh~V~v~~-~~------~~~~~~~~~G~~~~~~~ 74 (415)
T 3rsc_A 16 EGRHMAHLLIVNVASHGLILPTLTVVTELVRR--GHRVSYVT-AG------GFAEPVRAAGATVVPYQ 74 (415)
T ss_dssp ---CCCEEEEECCSCHHHHGGGHHHHHHHHHT--TCEEEEEE-CG------GGHHHHHHTTCEEEECC
T ss_pred CcccCCEEEEEeCCCccccccHHHHHHHHHHC--CCEEEEEe-CH------HHHHHHHhcCCEEEecc
Confidence 345578999887654 44 234455554432 47877544 32 24677788999988776
No 126
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=48.99 E-value=28 Score=33.32 Aligned_cols=73 Identities=11% Similarity=0.050 Sum_probs=42.1
Q ss_pred CCceEEEEEeCC----chh-HHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCC--eEEeCCCCChhHHHHH
Q 018502 127 PKYKVAVLASKQ----EHC-LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIP--YHYLCAKENEREEELL 199 (355)
Q Consensus 127 ~~~riavl~S~~----g~~-L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP--~~~~~~~~~~~~~~~~ 199 (355)
++.||+|++.|. |.. +..+ .. .+ .+++++++++++ .....++|+++|+| -.+ . .-++++
T Consensus 11 ~~~rvgiiG~G~~~~ig~~h~~~~-~~--~~--~~~lva~v~d~~---~~~a~~~a~~~g~~~~~~~-~-----~~~~ll 76 (398)
T 3dty_A 11 QPIRWAMVGGGSQSQIGYIHRCAA-LR--DN--TFVLVAGAFDID---PIRGSAFGEQLGVDSERCY-A-----DYLSMF 76 (398)
T ss_dssp SCEEEEEEECCTTCSSHHHHHHHH-HG--GG--SEEEEEEECCSS---HHHHHHHHHHTTCCGGGBC-S-----SHHHHH
T ss_pred CcceEEEEcCCccchhHHHHHHHH-hh--CC--CeEEEEEEeCCC---HHHHHHHHHHhCCCcceee-C-----CHHHHH
Confidence 468999999986 222 2222 11 22 378887555553 23567889999997 222 1 123444
Q ss_pred HHh----cCCCEEEEEee
Q 018502 200 ELV----QNTDFLVLARY 213 (355)
Q Consensus 200 ~~l----~~~Dlivla~y 213 (355)
+-- .++|+|+++.-
T Consensus 77 ~~~~~~~~~vD~V~i~tp 94 (398)
T 3dty_A 77 EQEARRADGIQAVSIATP 94 (398)
T ss_dssp HHHTTCTTCCSEEEEESC
T ss_pred hcccccCCCCCEEEECCC
Confidence 431 14888887743
No 127
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=48.86 E-value=22 Score=32.57 Aligned_cols=68 Identities=12% Similarity=0.104 Sum_probs=38.6
Q ss_pred CceEEEEEeCC-chhHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeCCCCChhHHHHHHHhcCCC
Q 018502 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTD 206 (355)
Q Consensus 128 ~~riavl~S~~-g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l~~~D 206 (355)
++||+|++.|. |.. .++..++.. -.+++++|+.... ....++++++|+|. + .. -+++++ ++|
T Consensus 6 ~~~igiIG~G~~g~~--~~~~~l~~~-~~~~l~av~d~~~----~~~~~~a~~~~~~~-~-~~-----~~~ll~---~~D 68 (308)
T 3uuw_A 6 NIKMGMIGLGSIAQK--AYLPILTKS-ERFEFVGAFTPNK----VKREKICSDYRIMP-F-DS-----IESLAK---KCD 68 (308)
T ss_dssp CCEEEEECCSHHHHH--HTHHHHTSC-SSSEEEEEECSCH----HHHHHHHHHHTCCB-C-SC-----HHHHHT---TCS
T ss_pred cCcEEEEecCHHHHH--HHHHHHHhC-CCeEEEEEECCCH----HHHHHHHHHcCCCC-c-CC-----HHHHHh---cCC
Confidence 57999998765 221 122222221 2478888876432 34677888899886 2 21 122332 677
Q ss_pred EEEEEe
Q 018502 207 FLVLAR 212 (355)
Q Consensus 207 livla~ 212 (355)
+++++.
T Consensus 69 ~V~i~t 74 (308)
T 3uuw_A 69 CIFLHS 74 (308)
T ss_dssp EEEECC
T ss_pred EEEEeC
Confidence 776653
No 128
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=48.34 E-value=34 Score=32.26 Aligned_cols=74 Identities=23% Similarity=0.279 Sum_probs=42.1
Q ss_pred CCceEEEEEeCC-chhHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeCCCCChhHHHHHHHh--c
Q 018502 127 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELV--Q 203 (355)
Q Consensus 127 ~~~riavl~S~~-g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l--~ 203 (355)
++.||+|+++|. |..+...+. ......++++|+...+ .....++|+++|++... ..-+++++.- .
T Consensus 3 ~~irVaIIG~G~iG~~~~~~l~---~~~~~~elvav~d~~~---~~~~~~~a~~~g~~~~~------~~~e~ll~~~~~~ 70 (312)
T 1nvm_B 3 QKLKVAIIGSGNIGTDLMIKVL---RNAKYLEMGAMVGIDA---ASDGLARAQRMGVTTTY------AGVEGLIKLPEFA 70 (312)
T ss_dssp SCEEEEEECCSHHHHHHHHHHH---HHCSSEEEEEEECSCT---TCHHHHHHHHTTCCEES------SHHHHHHHSGGGG
T ss_pred CCCEEEEEcCcHHHHHHHHHHH---hhCcCeEEEEEEeCCh---hhhHHHHHHHcCCCccc------CCHHHHHhccCCC
Confidence 468999998765 333322232 1112478888776542 22367889999988532 1123444431 2
Q ss_pred CCCEEEEEe
Q 018502 204 NTDFLVLAR 212 (355)
Q Consensus 204 ~~Dlivla~ 212 (355)
++|+++.+.
T Consensus 71 ~iDvV~~at 79 (312)
T 1nvm_B 71 DIDFVFDAT 79 (312)
T ss_dssp GEEEEEECS
T ss_pred CCcEEEECC
Confidence 578887763
No 129
>1urr_A CG18505 protein; acylphosphatase, enzyme; 1.5A {Drosophila melanogaster} SCOP: d.58.10.1
Probab=47.54 E-value=47 Score=26.27 Aligned_cols=60 Identities=7% Similarity=-0.088 Sum_probs=44.4
Q ss_pred HHHHHHHHHHhhhhhccceeeeCCCCCCceEEEEEeCCchhHHHHHhhhh-cCCCCeEEEEEEeC
Q 018502 101 QMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQ-EGKLPVEITCVISN 164 (355)
Q Consensus 101 ~L~~~l~~la~~lg~~~~~~~~~~~~~~~riavl~S~~g~~L~~ll~~~~-~~~l~~eI~~Vis~ 164 (355)
-++.-...+|.++|+.-|..+..| - +|-+.+.|....+..++..++ +|...+.|..|-..
T Consensus 25 GFR~~v~~~A~~lgL~G~V~N~~d--G--~Vei~~eG~~~~l~~f~~~l~~~gP~~a~V~~v~~~ 85 (102)
T 1urr_A 25 FFRKHTSHEAKRLGVRGWCMNTRD--G--TVKGQLEAPMMNLMEMKHWLENNRIPNAKVSKAEFS 85 (102)
T ss_dssp SHHHHHHHHHHHHTCEEEEEECTT--S--CEEEEEEECHHHHHHHHHHHHHCCSTTCEEEEEEEC
T ss_pred ChhHHHHHHHHHhCCcEEEEECCC--C--CEEEEEEcCHHHHHHHHHHHHhcCCCccEEEEEEEE
Confidence 367777888999999877544332 2 788888888888999999887 56555888877443
No 130
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus}
Probab=47.38 E-value=65 Score=28.69 Aligned_cols=118 Identities=14% Similarity=0.052 Sum_probs=64.1
Q ss_pred CCCceEEEEEeCCchhHHHHHhhhh-cCCCCeEEEEEEeCCCCCCC---chHHHHHHHCCCCeEEeCCCCChhHHHHHHH
Q 018502 126 DPKYKVAVLASKQEHCLVDFLYGWQ-EGKLPVEITCVISNHDRGPN---SHVIRFLERHGIPYHYLCAKENEREEELLEL 201 (355)
Q Consensus 126 ~~~~riavl~S~~g~~L~~ll~~~~-~~~l~~eI~~Vis~~~~~~~---~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~ 201 (355)
.+..||+|.+.++..+..++-.... ....++++..+-...+.... ..+.++++++|+++...-.. ....+++.+.
T Consensus 168 ~~~~~Ilv~~d~s~~s~~al~~a~~la~~~~~~l~ll~v~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~-g~~~~~I~~~ 246 (294)
T 3loq_A 168 SLFDRVLVAYDFSKWADRALEYAKFVVKKTGGELHIIHVSEDGDKTADLRVMEEVIGAEGIEVHVHIES-GTPHKAILAK 246 (294)
T ss_dssp CTTSEEEEECCSSHHHHHHHHHHHHHHHHHTCEEEEEEECSSSCCHHHHHHHHHHHHHTTCCEEEEEEC-SCHHHHHHHH
T ss_pred ccCCEEEEEECCCHHHHHHHHHHHHHhhhcCCEEEEEEEccCchHHHHHHHHHHHHHHcCCcEEEEEec-CCHHHHHHHH
Confidence 3457888887766544333222211 01123455544433321111 24566778889996543222 2344677777
Q ss_pred hc--CCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChHHHhhcCCCeEEecCC
Q 018502 202 VQ--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHG 265 (355)
Q Consensus 202 l~--~~Dlivla~y~~~~~~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~~l~~~~~~~INiHps 265 (355)
.+ ++|++|+..+.+.- +.++-+ .=...+++...+.+++=+|+.
T Consensus 247 a~~~~~dLlV~G~~~~~~------~~~~~~---------------Gs~~~~vl~~~~~pvLvv~~~ 291 (294)
T 3loq_A 247 REEINATTIFMGSRGAGS------VMTMIL---------------GSTSESVIRRSPVPVFVCKRG 291 (294)
T ss_dssp HHHTTCSEEEEECCCCSC------HHHHHH---------------HCHHHHHHHHCSSCEEEECSC
T ss_pred HHhcCcCEEEEeCCCCCC------ccceee---------------CcHHHHHHhcCCCCEEEECCC
Confidence 76 79999999987711 000001 123466777777778877765
No 131
>1vmb_A 30S ribosomal protein S6; TM0603, structural genomics, JCSG, structure initiative, PSI, joint center for structural GENO translation; 1.70A {Thermotoga maritima} SCOP: d.58.14.1
Probab=47.01 E-value=58 Score=27.55 Aligned_cols=70 Identities=11% Similarity=0.110 Sum_probs=43.0
Q ss_pred CCCCCccc-E-EEEEEcCC-----ccchHHHHHHHHHhc-CCeEeEeeeecc---------CCCCeEEEEEEEEeCCCCC
Q 018502 35 SVSPTLTH-G-IHVFHCPD-----EVGIVAKLSECIASR-GGNILAADVFVP---------EKKNVFYSRSEFIFDPIKW 97 (355)
Q Consensus 35 ~~~~~~~~-~-ILTV~GpD-----r~GIVA~VS~~La~~-g~NIld~~q~id---------~~~g~F~Mr~~v~~~~~~~ 97 (355)
.|+|..|+ | ++.+.=|| ...++..+.+.|.++ |+.|..++.-.. ...|.|+ .+.|+.+..
T Consensus 12 ~~~~~~Mr~YE~~~Il~P~l~ee~v~~~ve~~~~~I~~~~GG~I~~ve~wG~R~LAY~I~K~~~G~Yv-l~~f~a~~~-- 88 (140)
T 1vmb_A 12 HMAYVKERIYESMFIIAPNVPEEERENLVERVKKIIEERVKGKIDKVERMGMRKFAYEIKKFNEGDYT-VIYFRCDGQ-- 88 (140)
T ss_dssp -----CCEEEEEEEEECTTSCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEEEEEEEEETTEEEEEEE-EEEEEECSS--
T ss_pred cccccccccceEEEEECCCCCHHHHHHHHHHHHHHHHhcCCCEEEEEEeecCcccccccCCCCEEEEE-EEEEEECHH--
Confidence 47788887 3 55555666 448999999999999 999998765321 1245554 667777653
Q ss_pred ChHHHHHHHH
Q 018502 98 PREQMDEDFF 107 (355)
Q Consensus 98 ~~~~L~~~l~ 107 (355)
..++|...|.
T Consensus 89 ~i~ELer~lr 98 (140)
T 1vmb_A 89 NLQELENFYR 98 (140)
T ss_dssp STHHHHHHHH
T ss_pred HHHHHHHHhc
Confidence 3566666443
No 132
>2bjd_A Acylphosphatase; hyperthermophIle, hydrolase; 1.27A {Sulfolobus solfataricus} PDB: 2bje_A 1y9o_A
Probab=46.68 E-value=39 Score=26.82 Aligned_cols=59 Identities=19% Similarity=0.127 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHhhhhhccceeeeCCCCCCceEEEEEeCCchhHHHHHhhhhcCCCCeEEEEEE
Q 018502 100 EQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVI 162 (355)
Q Consensus 100 ~~L~~~l~~la~~lg~~~~~~~~~~~~~~~riavl~S~~g~~L~~ll~~~~~~~l~~eI~~Vi 162 (355)
--++.-...+|.++|+.-|..+.. +- +|-+.+.|....+..++..++.|...+.|..|-
T Consensus 27 VGFR~~v~~~A~~lgL~G~V~N~~--dG--~Vei~~eG~~~~i~~f~~~l~~gP~~A~V~~v~ 85 (101)
T 2bjd_A 27 VGFRKFVQIHAIRLGIKGYAKNLP--DG--SVEVVAEGYEEALSKLLERIKQGPPAAEVEKVD 85 (101)
T ss_dssp SSHHHHHHHHHHHTTCEEEEEECT--TS--CEEEEEEEEHHHHHHHHHHHTTCSTTCEEEEEE
T ss_pred cCHHHHHHHHHHHcCCeEEEEECC--CC--cEEEEEEeCHHHHHHHHHHHHhCCCccEEEEEE
Confidence 447888888899999987654333 22 788888888888999999988874348887764
No 133
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=46.56 E-value=66 Score=29.62 Aligned_cols=52 Identities=6% Similarity=0.000 Sum_probs=30.6
Q ss_pred CCCceEEEEEeCC-chhHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCe
Q 018502 126 DPKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPY 184 (355)
Q Consensus 126 ~~~~riavl~S~~-g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~ 184 (355)
.+++||+|++.|. |... +..++...-.+++++|+...+ ....++++++|+|.
T Consensus 6 ~~~~~v~iiG~G~ig~~~---~~~l~~~~~~~~~vav~d~~~----~~~~~~a~~~g~~~ 58 (346)
T 3cea_A 6 RKPLRAAIIGLGRLGERH---ARHLVNKIQGVKLVAACALDS----NQLEWAKNELGVET 58 (346)
T ss_dssp CCCEEEEEECCSTTHHHH---HHHHHHTCSSEEEEEEECSCH----HHHHHHHHTTCCSE
T ss_pred CCcceEEEEcCCHHHHHH---HHHHHhcCCCcEEEEEecCCH----HHHHHHHHHhCCCc
Confidence 4578999998865 3322 222220112478888765432 24556788888864
No 134
>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A*
Probab=46.42 E-value=44 Score=32.92 Aligned_cols=55 Identities=13% Similarity=0.185 Sum_probs=37.3
Q ss_pred CceEEEEEe-CC-chhHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeC
Q 018502 128 KYKVAVLAS-KQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (355)
Q Consensus 128 ~~riavl~S-~~-g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~ 188 (355)
++||++++| |+ |+...+++.+..+ ..+++++.+++. -..+.+.|+++++.+..+.
T Consensus 4 m~rI~ILGsTGSIG~~~l~vi~~~p~---~~~v~al~ag~n---i~~l~~~~~~f~~~~v~v~ 60 (388)
T 1r0k_A 4 PRTVTVLGATGSIGHSTLDLIERNLD---RYQVIALTANRN---VKDLADAAKRTNAKRAVIA 60 (388)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTGG---GEEEEEEEESSC---HHHHHHHHHHTTCSEEEES
T ss_pred ceEEEEECCCeEeHHHHHHHHHhCcC---cEEEEEEEcCCC---HHHHHHHHHHcCCcEEEEc
Confidence 479999998 66 5665566654221 267887766542 2356788899999887665
No 135
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=46.35 E-value=83 Score=28.91 Aligned_cols=51 Identities=14% Similarity=0.160 Sum_probs=31.0
Q ss_pred CceEEEEEeCC-chh--HHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEe
Q 018502 128 KYKVAVLASKQ-EHC--LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYL 187 (355)
Q Consensus 128 ~~riavl~S~~-g~~--L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~ 187 (355)
++||++++.+. ||. +..|...++.. .++|..+ +.. ...+..+..|++++.+
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~--GheV~v~-~~~------~~~~~~~~~g~~~~~~ 54 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQAS--GHEVLIA-APP------ELQATAHGAGLTTAGI 54 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHT--TCEEEEE-ECH------HHHHHHHHBTCEEEEC
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHC--CCEEEEe-cCh------hhHHHHHhCCCceeee
Confidence 36999887443 442 33455554432 4787654 432 3566778899998877
No 136
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=45.60 E-value=35 Score=32.02 Aligned_cols=70 Identities=19% Similarity=0.142 Sum_probs=39.9
Q ss_pred CCceEEEEEeCCchhHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeCCCCChhHHHHHHHhc--C
Q 018502 127 PKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ--N 204 (355)
Q Consensus 127 ~~~riavl~S~~g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l~--~ 204 (355)
+++||+|++.|.-.. ..++..++.. -.+++++|+.... ....++++++|+|.+. + +.+++. +
T Consensus 26 ~~~rigiIG~G~~g~-~~~~~~l~~~-~~~~l~av~d~~~----~~~~~~a~~~g~~~~~-~---------~~~ll~~~~ 89 (350)
T 3rc1_A 26 NPIRVGVIGCADIAW-RRALPALEAE-PLTEVTAIASRRW----DRAKRFTERFGGEPVE-G---------YPALLERDD 89 (350)
T ss_dssp CCEEEEEESCCHHHH-HTHHHHHHHC-TTEEEEEEEESSH----HHHHHHHHHHCSEEEE-S---------HHHHHTCTT
T ss_pred CceEEEEEcCcHHHH-HHHHHHHHhC-CCeEEEEEEcCCH----HHHHHHHHHcCCCCcC-C---------HHHHhcCCC
Confidence 467999998765211 0122222221 1488988876432 3467788899998751 1 223443 5
Q ss_pred CCEEEEEe
Q 018502 205 TDFLVLAR 212 (355)
Q Consensus 205 ~Dlivla~ 212 (355)
+|+|+++.
T Consensus 90 ~D~V~i~t 97 (350)
T 3rc1_A 90 VDAVYVPL 97 (350)
T ss_dssp CSEEEECC
T ss_pred CCEEEECC
Confidence 77777653
No 137
>4h31_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PE5; 1.70A {Vibrio vulnificus} PDB: 3upd_A*
Probab=45.34 E-value=35 Score=33.18 Aligned_cols=60 Identities=23% Similarity=0.269 Sum_probs=34.8
Q ss_pred HHHhcCCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChHHHhhc-CCCeEEecCCCCCCCCC
Q 018502 199 LELVQNTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSY-GKDVINIHHGLLPSFKG 272 (355)
Q Consensus 199 ~~~l~~~Dlivla~y~~~~~~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~~l~~~-~~~~INiHpslLP~yrG 272 (355)
.+.+.++|++.+-.|.. --...|++-++ ....-+|-+..++++.. +..++=.|| ||+++.
T Consensus 245 ~eav~~aDvvyt~~w~s-~~~~~~~~~~~-----------~~~~~~y~v~~~~l~~~ak~~~i~mH~--LP~~~n 305 (358)
T 4h31_A 245 AEGVQGCDFLYTDVWVS-MGESPEAWDER-----------VALMKPYQVNMNVLKQTGNPNVKFMHC--LPAFHN 305 (358)
T ss_dssp HHHHTTCSEEEECCSSC-TTSCTTHHHHH-----------HHHHGGGCBCHHHHHHTTCTTCEEEEC--SCCCCS
T ss_pred HHHhccCcEEEEEEEEE-cccCchhHHHH-----------HHHHhCcccCHHHHHhcCCCCcEEECC--CCCCCC
Confidence 34555899998777743 00001111111 01123467888999864 457899999 699875
No 138
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=45.02 E-value=72 Score=29.41 Aligned_cols=55 Identities=13% Similarity=0.046 Sum_probs=33.8
Q ss_pred CCCCceEEEEEeCC-ch--hHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeC
Q 018502 125 IDPKYKVAVLASKQ-EH--CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (355)
Q Consensus 125 ~~~~~riavl~S~~-g~--~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~ 188 (355)
...++||+++..+. || .+..|...++.. .++|..+ +.. ...+..++.|+++..++
T Consensus 17 ~~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~--GheV~v~-~~~------~~~~~~~~~g~~~~~~~ 74 (412)
T 3otg_A 17 EGRHMRVLFASLGTHGHTYPLLPLATAARAA--GHEVTFA-TGE------GFAGTLRKLGFEPVATG 74 (412)
T ss_dssp -CCSCEEEEECCSSHHHHGGGHHHHHHHHHT--TCEEEEE-ECG------GGHHHHHHTTCEEEECC
T ss_pred ccceeEEEEEcCCCcccHHHHHHHHHHHHHC--CCEEEEE-ccH------HHHHHHHhcCCceeecC
Confidence 34568999887554 33 233455555432 4787654 432 13677788999998776
No 139
>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*
Probab=44.85 E-value=64 Score=30.53 Aligned_cols=50 Identities=24% Similarity=0.325 Sum_probs=33.7
Q ss_pred HHhcCCCEEEEEeeccccchhhHhh---hhhhhhhhhcccCcccccccccCChHHHhhcCCCeEEecCCC
Q 018502 200 ELVQNTDFLVLARYMQPVPLQKEAY---LGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGL 266 (355)
Q Consensus 200 ~~l~~~Dlivla~y~~~~~~~~~~~---~~~~~~~~~~~~~~~s~y~~~il~~~~l~~~~~~~INiHpsl 266 (355)
+.++++|++.+-+|.. |-+ -+|. + ..-+|.+.+++++..+..++=+||..
T Consensus 209 eav~~aDvvyt~~~q~------er~~~~~~~~---------~--~~~~y~v~~~~l~~a~~~ai~mH~lP 261 (299)
T 1pg5_A 209 EVINEVDVLYVTRIQK------ERFVDEMEYE---------K--IKGSYIVSLDLANKMKKDSIILHPLP 261 (299)
T ss_dssp GTGGGCSEEEEECCCS------TTSSCHHHHH---------H--HGGGGSBCHHHHHTSCTTCEEECCSC
T ss_pred HHhcCCCEEEeCCccc------ccccCHHHHH---------H--hhcCcccCHHHHHhcCCCCEEECCCC
Confidence 3455899999988843 111 1111 0 01257899999999888999999974
No 140
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=44.59 E-value=30 Score=32.39 Aligned_cols=51 Identities=10% Similarity=0.036 Sum_probs=31.5
Q ss_pred CCceEEEEEeCCchhHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCe
Q 018502 127 PKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPY 184 (355)
Q Consensus 127 ~~~riavl~S~~g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~ 184 (355)
+++||+|++.|.- -...+..++.. -.+++++|+.... ....++++++|+|.
T Consensus 4 ~~~~vgiiG~G~~--g~~~~~~l~~~-~~~~lvav~d~~~----~~~~~~~~~~g~~~ 54 (354)
T 3db2_A 4 NPVGVAAIGLGRW--AYVMADAYTKS-EKLKLVTCYSRTE----DKREKFGKRYNCAG 54 (354)
T ss_dssp CCEEEEEECCSHH--HHHHHHHHTTC-SSEEEEEEECSSH----HHHHHHHHHHTCCC
T ss_pred CcceEEEEccCHH--HHHHHHHHHhC-CCcEEEEEECCCH----HHHHHHHHHcCCCC
Confidence 4689999987652 12333333321 1588888765432 34667788889886
No 141
>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal-B pyrimidine biosynthesis, hydrolase-transferase; HET: FLC; 2.30A {Aquifex aeolicus}
Probab=44.26 E-value=25 Score=33.27 Aligned_cols=115 Identities=16% Similarity=0.106 Sum_probs=63.7
Q ss_pred chhHHHHHhhh----hcCCCCeEEEEEEeC--CCCCCCchHHHHHHHCCCCeEEeCCCCChh----------HHHHHHHh
Q 018502 139 EHCLVDFLYGW----QEGKLPVEITCVISN--HDRGPNSHVIRFLERHGIPYHYLCAKENER----------EEELLELV 202 (355)
Q Consensus 139 g~~L~~ll~~~----~~~~l~~eI~~Vis~--~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~----------~~~~~~~l 202 (355)
.|..|.|++.+ ..|.+..--++.+.+ +.+ -..+....+...|+-+..+..+.-.. ..++.+.+
T Consensus 125 ~HPtQaLaDl~Ti~e~~g~l~gl~va~vGDl~~~r-va~Sl~~~~~~~g~~v~~~~P~~~~p~~~~~~g~~~~~d~~eav 203 (291)
T 3d6n_B 125 QHPSQGLIDFFTIKEHFGEVKDLRVLYVGDIKHSR-VFRSGAPLLNMFGAKIGVCGPKTLIPRDVEVFKVDVFDDVDKGI 203 (291)
T ss_dssp BCHHHHHHHHHHHHHHHSCCTTCEEEEESCCTTCH-HHHHHHHHHHHTTCEEEEESCGGGSCTTGGGGCEEEESSHHHHH
T ss_pred cCcHHHHHHHHHHHHHhCCcCCcEEEEECCCCCCc-hHHHHHHHHHHCCCEEEEECCchhCCchHHHCCCEEEcCHHHHh
Confidence 47666666542 236665223344554 311 11356777888898877665321100 12344556
Q ss_pred cCCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccc-cccCChHHHhhcCCCeEEecCCCCCCCCC
Q 018502 203 QNTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYF-NMILSGKFLRSYGKDVINIHHGLLPSFKG 272 (355)
Q Consensus 203 ~~~Dlivla~y~~~~~~~~~~~~~~~~~~~~~~~~~~s~y~-~~il~~~~l~~~~~~~INiHpslLP~yrG 272 (355)
+++|++.+ -|.| .|-.- .+...+.--|+ +|-+.++.++..+ |=.|| ||++||
T Consensus 204 ~~aDvvy~-~~~q-----~er~~-------~~~~~~~~~~~~~y~v~~~~l~~a~---i~mH~--lP~~Rg 256 (291)
T 3d6n_B 204 DWADVVIW-LRLQ-----KERQK-------ENYIPSESSYFKQFGLTKERFEKVK---LYMHP--GPVNRN 256 (291)
T ss_dssp HHCSEEEE-CCCC-----THHHH-------TTSSSCHHHHHHHHSBCHHHHTTCC---CEECS--SCCCBT
T ss_pred CCCCEEEE-eCcc-----cCccc-------cccchhHHHHHhhcCcCHHHHHhcc---cccCC--CCCCCC
Confidence 68999988 7765 11100 00001111233 5789999998775 89999 699986
No 142
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=44.18 E-value=70 Score=29.98 Aligned_cols=54 Identities=15% Similarity=0.238 Sum_probs=33.8
Q ss_pred CceEEEEEeCC-chhH--HHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeC
Q 018502 128 KYKVAVLASKQ-EHCL--VDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (355)
Q Consensus 128 ~~riavl~S~~-g~~L--~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~ 188 (355)
++||.+.+.|. ||.. .+|.+.++.. .++|..|-+.+. --.++..+.|+|++.++
T Consensus 2 ~~~i~i~~GGTgGHi~palala~~L~~~--g~~V~~vg~~~g-----~e~~~v~~~g~~~~~i~ 58 (365)
T 3s2u_A 2 KGNVLIMAGGTGGHVFPALACAREFQAR--GYAVHWLGTPRG-----IENDLVPKAGLPLHLIQ 58 (365)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHHHHHT--TCEEEEEECSSS-----THHHHTGGGTCCEEECC
T ss_pred CCcEEEEcCCCHHHHHHHHHHHHHHHhC--CCEEEEEECCch-----HhhchhhhcCCcEEEEE
Confidence 57899888777 5642 3455555443 478887655431 12456678899998876
No 143
>2der_A TRNA-specific 2-thiouridylase MNMA; protein-RNA complex, transferase/RNA complex; 3.10A {Escherichia coli} PDB: 2det_A 2deu_A*
Probab=43.73 E-value=33 Score=33.34 Aligned_cols=57 Identities=14% Similarity=0.071 Sum_probs=37.8
Q ss_pred CCceEEEEEeCC-chh-HHHHHhhhhcCCCCeEEEEEEeCCCCCC-----------CchHHHHHHHCCCCeEEeC
Q 018502 127 PKYKVAVLASKQ-EHC-LVDFLYGWQEGKLPVEITCVISNHDRGP-----------NSHVIRFLERHGIPYHYLC 188 (355)
Q Consensus 127 ~~~riavl~S~~-g~~-L~~ll~~~~~~~l~~eI~~Vis~~~~~~-----------~~~v~~~a~~~gIP~~~~~ 188 (355)
+..||+|..||. .|. +..+|.. . ..+|.+|..++-... ...+.++|++.|||++.++
T Consensus 16 ~~~kVvVa~SGGvDSsv~a~lL~~--~---G~~V~~v~~~~~~~~~~~~~~~s~~d~~~a~~va~~LGIp~~vvd 85 (380)
T 2der_A 16 TAKKVIVGMSGGVDSSVSAWLLQQ--Q---GYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGIELHTVN 85 (380)
T ss_dssp -CCEEEEECCSCSTTHHHHHHHHT--T---CCEEEEEEEECCCCCSHHHHHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred CCCEEEEEEEChHHHHHHHHHHHH--c---CCeEEEEEEEcCccccccCCCCCHHHHHHHHHHHHHcCCcEEEEe
Confidence 457999999976 344 3334432 2 478988877652111 1247889999999999876
No 144
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=42.54 E-value=42 Score=31.17 Aligned_cols=68 Identities=13% Similarity=0.166 Sum_probs=38.2
Q ss_pred CCceEEEEEeCC-chhHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeCCCCChhHHHHHHHhc--
Q 018502 127 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ-- 203 (355)
Q Consensus 127 ~~~riavl~S~~-g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l~-- 203 (355)
+++||+|++.|. |.. ++..++.. -.+++++|+.... ....++++++|++++ . .+.+++.
T Consensus 3 ~~~rvgiiG~G~~g~~---~~~~l~~~-~~~~l~av~d~~~----~~~~~~a~~~g~~~~--~--------~~~~~l~~~ 64 (344)
T 3euw_A 3 LTLRIALFGAGRIGHV---HAANIAAN-PDLELVVIADPFI----EGAQRLAEANGAEAV--A--------SPDEVFARD 64 (344)
T ss_dssp CCEEEEEECCSHHHHH---HHHHHHHC-TTEEEEEEECSSH----HHHHHHHHTTTCEEE--S--------SHHHHTTCS
T ss_pred CceEEEEECCcHHHHH---HHHHHHhC-CCcEEEEEECCCH----HHHHHHHHHcCCcee--C--------CHHHHhcCC
Confidence 467999998765 332 22222221 1478888765432 345677888885443 2 1233444
Q ss_pred CCCEEEEEe
Q 018502 204 NTDFLVLAR 212 (355)
Q Consensus 204 ~~Dlivla~ 212 (355)
++|+++++.
T Consensus 65 ~~D~V~i~t 73 (344)
T 3euw_A 65 DIDGIVIGS 73 (344)
T ss_dssp CCCEEEECS
T ss_pred CCCEEEEeC
Confidence 567776654
No 145
>3k32_A Uncharacterized protein MJ0690; predicted subunit of tRNA methyltransferase, methanocaldococcus jannaschii DSM , PSI- 2; 2.50A {Methanocaldococcus jannaschii}
Probab=42.02 E-value=40 Score=29.35 Aligned_cols=56 Identities=14% Similarity=-0.037 Sum_probs=37.6
Q ss_pred CceEEEEEeCCc-h-hHHHHHhhhhcCCCCeEEEEEEeCCCCC-CCchHHHHHHHCCCCeEEeC
Q 018502 128 KYKVAVLASKQE-H-CLVDFLYGWQEGKLPVEITCVISNHDRG-PNSHVIRFLERHGIPYHYLC 188 (355)
Q Consensus 128 ~~riavl~S~~g-~-~L~~ll~~~~~~~l~~eI~~Vis~~~~~-~~~~v~~~a~~~gIP~~~~~ 188 (355)
+.||+|..||.- | .+..++.. .+.++.++..++... ....+.++|++.|||++.++
T Consensus 6 ~~kv~v~~SGG~DS~~ll~ll~~-----~g~~v~~~~v~~~~~~~~~~~~~~a~~lgi~~~~~~ 64 (203)
T 3k32_A 6 LMDVHVLFSGGKDSSLSAVILKK-----LGYNPHLITINFGVIPSYKLAEETAKILGFKHKVIT 64 (203)
T ss_dssp CEEEEEECCCSHHHHHHHHHHHH-----TTEEEEEEEEECSSSCTTHHHHHHHHHHTCEEEEEE
T ss_pred CCeEEEEEECcHHHHHHHHHHHH-----cCCCeEEEEEeCCCchHHHHHHHHHHHhCCCEEEEE
Confidence 368999999863 3 33334432 236787776666322 23468899999999998876
No 146
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=41.86 E-value=56 Score=30.54 Aligned_cols=50 Identities=12% Similarity=0.111 Sum_probs=29.5
Q ss_pred CCceEEEEEeCCchhHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCC
Q 018502 127 PKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIP 183 (355)
Q Consensus 127 ~~~riavl~S~~g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP 183 (355)
+++||+|++.|.-. ..++..+... -..++++|+.... ....++++++|+|
T Consensus 5 ~~~~vgiiG~G~ig--~~~~~~l~~~-~~~~lv~v~d~~~----~~~~~~a~~~~~~ 54 (362)
T 1ydw_A 5 TQIRIGVMGCADIA--RKVSRAIHLA-PNATISGVASRSL----EKAKAFATANNYP 54 (362)
T ss_dssp -CEEEEEESCCTTH--HHHHHHHHHC-TTEEEEEEECSSH----HHHHHHHHHTTCC
T ss_pred CceEEEEECchHHH--HHHHHHHhhC-CCcEEEEEEcCCH----HHHHHHHHHhCCC
Confidence 56899999886632 1222222221 1478888776432 2466788888874
No 147
>2vh7_A Acylphosphatase-1; hydrolase, acetylation; 1.45A {Homo sapiens} PDB: 2w4c_A 2w4p_A 2k7k_A 2k7j_A 2acy_A
Probab=41.03 E-value=55 Score=25.68 Aligned_cols=58 Identities=9% Similarity=-0.114 Sum_probs=42.2
Q ss_pred HHHHHHHHHHhhhhhccceeeeCCCCCCceEEEEEeCCchhHHHHHhhhh-cCCCCeEEEEEE
Q 018502 101 QMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQ-EGKLPVEITCVI 162 (355)
Q Consensus 101 ~L~~~l~~la~~lg~~~~~~~~~~~~~~~riavl~S~~g~~L~~ll~~~~-~~~l~~eI~~Vi 162 (355)
-++.-...+|.++|+.-|..+..| - +|-+.+.|....+..++..++ .+...+.|..|-
T Consensus 22 GFR~~v~~~A~~lgL~G~V~N~~d--G--~Vei~~eG~~~~v~~f~~~l~~~~p~~a~V~~v~ 80 (99)
T 2vh7_A 22 FFRKHTQAEGKKLGLVGWVQNTDR--G--TVQGQLQGPISKVRHMQEWLETRGSPKSHIDKAN 80 (99)
T ss_dssp CHHHHHHHHHHHTTCEEEEEECTT--S--CEEEEEEEEHHHHHHHHHHHHHTCSTTCEEEEEE
T ss_pred ChHHHHHHHHHHcCCcEEEEECCC--C--CEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEE
Confidence 367777888999999876544332 2 788888888888999999886 454447887764
No 148
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=40.74 E-value=1.3e+02 Score=23.61 Aligned_cols=59 Identities=17% Similarity=0.232 Sum_probs=33.1
Q ss_pred CCceEEEEEeCCchhHHHHHhhhhcCCCCeEEEEEEeCCCCCC-----------CchHHHHHHHCCCCeEEeC
Q 018502 127 PKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGP-----------NSHVIRFLERHGIPYHYLC 188 (355)
Q Consensus 127 ~~~riavl~S~~g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~-----------~~~v~~~a~~~gIP~~~~~ 188 (355)
+++|++|+++|. .-..+++.++... ..++++++.+.+... ...+.++++++++....+.
T Consensus 3 ~~~~vlIiGaG~--~g~~l~~~l~~~~-g~~vvg~~d~~~~~~g~~i~g~pV~g~~~l~~~~~~~~id~viia 72 (141)
T 3nkl_A 3 AKKKVLIYGAGS--AGLQLANMLRQGK-EFHPIAFIDDDRKKHKTTMQGITIYRPKYLERLIKKHCISTVLLA 72 (141)
T ss_dssp CCEEEEEECCSH--HHHHHHHHHHHSS-SEEEEEEECSCGGGTTCEETTEEEECGGGHHHHHHHHTCCEEEEC
T ss_pred CCCEEEEECCCH--HHHHHHHHHHhCC-CcEEEEEEECCcccCCCEecCeEEECHHHHHHHHHHCCCCEEEEe
Confidence 467888887654 2233444433322 589999987653211 1235556666666655544
No 149
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=40.40 E-value=31 Score=33.34 Aligned_cols=75 Identities=5% Similarity=0.033 Sum_probs=39.3
Q ss_pred CCceEEEEEeCCchhH-HHHHhhhh-cCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCC--eEEeCCCCChhHHHHHHHh
Q 018502 127 PKYKVAVLASKQEHCL-VDFLYGWQ-EGKLPVEITCVISNHDRGPNSHVIRFLERHGIP--YHYLCAKENEREEELLELV 202 (355)
Q Consensus 127 ~~~riavl~S~~g~~L-~~ll~~~~-~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP--~~~~~~~~~~~~~~~~~~l 202 (355)
++.||+|++.|.++-. ...+..++ .+ .+++++.+++++ .....++|+++|+| -.+ . .-+++++--
T Consensus 36 ~~~rvgiiG~G~~~~ig~~h~~~~~~~~--~~~lva~v~d~~---~~~a~~~a~~~g~~~~~~~-~-----~~~~ll~~~ 104 (417)
T 3v5n_A 36 KRIRLGMVGGGSGAFIGAVHRIAARLDD--HYELVAGALSST---PEKAEASGRELGLDPSRVY-S-----DFKEMAIRE 104 (417)
T ss_dssp CCEEEEEESCC--CHHHHHHHHHHHHTS--CEEEEEEECCSS---HHHHHHHHHHHTCCGGGBC-S-----CHHHHHHHH
T ss_pred CcceEEEEcCCCchHHHHHHHHHHhhCC--CcEEEEEEeCCC---HHHHHHHHHHcCCCccccc-C-----CHHHHHhcc
Confidence 4689999998863211 11111111 22 378886444442 23567888999997 222 1 123444331
Q ss_pred ----cCCCEEEEEe
Q 018502 203 ----QNTDFLVLAR 212 (355)
Q Consensus 203 ----~~~Dlivla~ 212 (355)
.++|+|+++.
T Consensus 105 ~~~~~~vD~V~I~t 118 (417)
T 3v5n_A 105 AKLKNGIEAVAIVT 118 (417)
T ss_dssp HHCTTCCSEEEECS
T ss_pred cccCCCCcEEEECC
Confidence 1478887764
No 150
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=40.38 E-value=74 Score=29.46 Aligned_cols=69 Identities=12% Similarity=0.120 Sum_probs=39.7
Q ss_pred CceEEEEEeCCchhHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeCCCCChhHHHHHHHhc--CC
Q 018502 128 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ--NT 205 (355)
Q Consensus 128 ~~riavl~S~~g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l~--~~ 205 (355)
++||+|++.|.- -..++..+.. .-.+++++|+...+ ....++++++|++..+-+ +.+++. ++
T Consensus 2 ~~rvgiIG~G~~--g~~~~~~l~~-~~~~~l~av~d~~~----~~~~~~~~~~~~~~~~~~---------~~~ll~~~~~ 65 (344)
T 3ezy_A 2 SLRIGVIGLGRI--GTIHAENLKM-IDDAILYAISDVRE----DRLREMKEKLGVEKAYKD---------PHELIEDPNV 65 (344)
T ss_dssp CEEEEEECCSHH--HHHHHHHGGG-STTEEEEEEECSCH----HHHHHHHHHHTCSEEESS---------HHHHHHCTTC
T ss_pred eeEEEEEcCCHH--HHHHHHHHHh-CCCcEEEEEECCCH----HHHHHHHHHhCCCceeCC---------HHHHhcCCCC
Confidence 469999987642 1223333332 11488888775432 346778888998744311 223333 57
Q ss_pred CEEEEEe
Q 018502 206 DFLVLAR 212 (355)
Q Consensus 206 Dlivla~ 212 (355)
|+++++.
T Consensus 66 D~V~i~t 72 (344)
T 3ezy_A 66 DAVLVCS 72 (344)
T ss_dssp CEEEECS
T ss_pred CEEEEcC
Confidence 7777664
No 151
>2gv1_A Probable acylphosphatase; globular alpha-helix/beta-sheet protein, hydrolase; NMR {Escherichia coli}
Probab=39.73 E-value=65 Score=24.86 Aligned_cols=57 Identities=14% Similarity=0.082 Sum_probs=41.4
Q ss_pred HHHHHHHHHhhhhhccceeeeCCCCCCceEEEEEeCCchhHHHHHhhh-hcCCCCeEEEEEE
Q 018502 102 MDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGW-QEGKLPVEITCVI 162 (355)
Q Consensus 102 L~~~l~~la~~lg~~~~~~~~~~~~~~~riavl~S~~g~~L~~ll~~~-~~~~l~~eI~~Vi 162 (355)
++.-...+|.++|+.-|..+..| - +|-+.+.|....+.+++..+ +.|...+.|..|-
T Consensus 19 FR~~v~~~A~~lgL~G~V~N~~d--G--~Vei~~eG~~~~i~~f~~~l~~~gP~~a~V~~v~ 76 (92)
T 2gv1_A 19 FRYTTQYEAKRLGLTGYAKNLDD--G--SVEVVACGEEGQVEKLMQWLKSGGPRSARVERVL 76 (92)
T ss_dssp CCSHHHHHHHHHTCCCEEEECSS--S--CEEEEECSCHHHHHHHHHHHHHTSSTTSEEEEEE
T ss_pred HHHHHHHHHHHcCCeEEEEECCC--C--cEEEEEEeCHHHHHHHHHHhhccCCCceEEEEEE
Confidence 34556677889999876544332 2 78888988888899999988 7774348887763
No 152
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=39.72 E-value=1.7e+02 Score=26.91 Aligned_cols=54 Identities=15% Similarity=0.299 Sum_probs=33.0
Q ss_pred CCCceEEEEEeCC-ch--hHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeC
Q 018502 126 DPKYKVAVLASKQ-EH--CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (355)
Q Consensus 126 ~~~~riavl~S~~-g~--~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~ 188 (355)
..++||+++..+. || .+..|...++.. .++|..+ +.. ...+..+..|+++..++
T Consensus 13 ~~~MrIl~~~~~~~gh~~~~~~La~~L~~~--GheV~v~-~~~------~~~~~~~~~G~~~~~~~ 69 (398)
T 4fzr_A 13 GSHMRILVIAGCSEGFVMPLVPLSWALRAA--GHEVLVA-ASE------NMGPTVTGAGLPFAPTC 69 (398)
T ss_dssp --CCEEEEECCSSHHHHGGGHHHHHHHHHT--TCEEEEE-EEG------GGHHHHHHTTCCEEEEE
T ss_pred CCceEEEEEcCCCcchHHHHHHHHHHHHHC--CCEEEEE-cCH------HHHHHHHhCCCeeEecC
Confidence 3468999886543 44 234555555432 4788654 432 24677888999998775
No 153
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa}
Probab=39.32 E-value=64 Score=28.75 Aligned_cols=66 Identities=12% Similarity=0.135 Sum_probs=40.5
Q ss_pred HHHHHHHCCCC-eE-EeCCCCChhHHHHHHHhc--CCCEEEEEeeccccchhhHhhhhhhhhhhhcccCccccccccc--
Q 018502 173 VIRFLERHGIP-YH-YLCAKENEREEELLELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMI-- 246 (355)
Q Consensus 173 v~~~a~~~gIP-~~-~~~~~~~~~~~~~~~~l~--~~Dlivla~y~~~~~~~~~~~~~~~~~~~~~~~~~~s~y~~~i-- 246 (355)
+.++++++|++ +. .+. . ....+++.+..+ ++|++|+..+.+ +...+.+
T Consensus 204 l~~~~~~~g~~~~~~~v~-~-g~~~~~I~~~a~~~~~dLiVmG~~g~------------------------~~~~~~~~G 257 (290)
T 3mt0_A 204 CRTFQAEYGFSDEQLHIE-E-GPADVLIPRTAQKLDAVVTVIGTVAR------------------------TGLSGALIG 257 (290)
T ss_dssp HHHHHHHHTCCTTTEEEE-E-SCHHHHHHHHHHHHTCSEEEEECCSS------------------------CCGGGCCSC
T ss_pred HHHHHHHcCCCcceEEEe-c-cCHHHHHHHHHHhcCCCEEEECCCCC------------------------cCCcceecc
Confidence 45577888985 21 111 1 234467777776 799999998876 1111122
Q ss_pred -CChHHHhhcCCCeEEecC
Q 018502 247 -LSGKFLRSYGKDVINIHH 264 (355)
Q Consensus 247 -l~~~~l~~~~~~~INiHp 264 (355)
...+++...+.+++-++|
T Consensus 258 sv~~~vl~~~~~pVLvv~~ 276 (290)
T 3mt0_A 258 NTAEVVLDTLESDVLVLKP 276 (290)
T ss_dssp HHHHHHHTTCSSEEEEECC
T ss_pred hHHHHHHhcCCCCEEEECC
Confidence 345677777777777775
No 154
>2hma_A Probable tRNA (5-methylaminomethyl-2-thiouridylat methyltransferase; alpha-beta, beta barrel, structural genomics, PSI-2; HET: MSE SAM; 2.41A {Streptococcus pneumoniae}
Probab=39.26 E-value=36 Score=32.99 Aligned_cols=57 Identities=18% Similarity=0.187 Sum_probs=38.2
Q ss_pred CCceEEEEEeCCc-hh-HHHHHhhhhcCCCCeEEEEEEeCCCCCC-----------CchHHHHHHHCCCCeEEeC
Q 018502 127 PKYKVAVLASKQE-HC-LVDFLYGWQEGKLPVEITCVISNHDRGP-----------NSHVIRFLERHGIPYHYLC 188 (355)
Q Consensus 127 ~~~riavl~S~~g-~~-L~~ll~~~~~~~l~~eI~~Vis~~~~~~-----------~~~v~~~a~~~gIP~~~~~ 188 (355)
+.+||+|..||.- |. +..+|.. . ..++.+|..++.... ...+.++|++.|||++.++
T Consensus 8 ~~~kVlVa~SGGvDSsv~a~lL~~--~---G~~V~~v~~~~~~~~~~~~~c~~~~d~~~a~~va~~lGIp~~vv~ 77 (376)
T 2hma_A 8 SKTRVVVGMSGGVDSSVTALLLKE--Q---GYDVIGIFMKNWDDTDENGVCTATEDYKDVVAVADQIGIPYYSVN 77 (376)
T ss_dssp GGSEEEEECCSSHHHHHHHHHHHH--T---TCEEEEEEEECCCCCC----CHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred CCCeEEEEEeCHHHHHHHHHHHHH--c---CCcEEEEEEECCCcccccccCCCHHHHHHHHHHHHHhCCcEEEEe
Confidence 4579999999863 43 3334432 2 378888877653211 1247889999999999876
No 155
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=39.06 E-value=66 Score=29.61 Aligned_cols=66 Identities=8% Similarity=0.080 Sum_probs=38.5
Q ss_pred CceEEEEEeCC-chhHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeCCCCChhHHHHHHHhc--C
Q 018502 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ--N 204 (355)
Q Consensus 128 ~~riavl~S~~-g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l~--~ 204 (355)
++||+|++.|. |.. ++..+... -.+++++|+... .....++++++|++ + .. +.+++. +
T Consensus 3 ~~~vgiiG~G~~g~~---~~~~l~~~-~~~~l~av~d~~----~~~~~~~~~~~~~~--~-~~--------~~~~l~~~~ 63 (331)
T 4hkt_A 3 TVRFGLLGAGRIGKV---HAKAVSGN-ADARLVAVADAF----PAAAEAIAGAYGCE--V-RT--------IDAIEAAAD 63 (331)
T ss_dssp CEEEEEECCSHHHHH---HHHHHHHC-TTEEEEEEECSS----HHHHHHHHHHTTCE--E-CC--------HHHHHHCTT
T ss_pred ceEEEEECCCHHHHH---HHHHHhhC-CCcEEEEEECCC----HHHHHHHHHHhCCC--c-CC--------HHHHhcCCC
Confidence 57999998765 333 22222221 148888876543 23467788889988 2 21 223333 5
Q ss_pred CCEEEEEe
Q 018502 205 TDFLVLAR 212 (355)
Q Consensus 205 ~Dlivla~ 212 (355)
+|+++++.
T Consensus 64 ~D~V~i~t 71 (331)
T 4hkt_A 64 IDAVVICT 71 (331)
T ss_dssp CCEEEECS
T ss_pred CCEEEEeC
Confidence 77777654
No 156
>2w6k_A COBE; biosynthetic protein, cobalamin, complete proteome, vitamin B12; 1.70A {Pseudomonas aeruginosa} SCOP: c.151.1.1 PDB: 2bsn_A 2w6l_A
Probab=38.97 E-value=68 Score=27.09 Aligned_cols=64 Identities=14% Similarity=0.137 Sum_probs=38.2
Q ss_pred CCCCceEEEEEeCCchhH---HHHHhh-hhcCCC-CeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeC
Q 018502 125 IDPKYKVAVLASKQEHCL---VDFLYG-WQEGKL-PVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (355)
Q Consensus 125 ~~~~~riavl~S~~g~~L---~~ll~~-~~~~~l-~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~ 188 (355)
..|++-++=++...|... .+.++. +....+ +..|.++.|-..+.....+.++|+++|+|+..++
T Consensus 7 ~~p~~lvvGIGcrrg~~~~~i~~ai~~aL~~~~l~~~~v~~latid~K~dE~gL~~~A~~lg~pl~~~~ 75 (145)
T 2w6k_A 7 PIPSLLIAGIGCRRGCSAEHLRALLERTLGEHGRSLAELDALASIDGKRDEPGLRQLATLLERPVHFLA 75 (145)
T ss_dssp CCCCCEEEEEEECTTCCHHHHHHHHHHHHHHTTCCGGGCCEEEEECSSSCCHHHHHHHHHHTSCEEEEC
T ss_pred ccCCeEEEEEeeCCCCCHHHHHHHHHHHHHHcCCCHHHcceEechHHhCCCHHHHHHHHHhCCCcEEeC
Confidence 344444555556666433 333332 333333 3566667665544334578999999999999876
No 157
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=38.92 E-value=89 Score=23.21 Aligned_cols=73 Identities=18% Similarity=0.311 Sum_probs=37.4
Q ss_pred CCceEEEEEeCC-chhHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeCCCCChhHHHHHHHhcCC
Q 018502 127 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNT 205 (355)
Q Consensus 127 ~~~riavl~S~~-g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l~~~ 205 (355)
+.+||+|++.|. |..+...|. +.| ..+|..+ ++. ..-.+.+...++.+...+. ...+++.+.+.++
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~--~~g--~~~v~~~--~r~----~~~~~~~~~~~~~~~~~d~---~~~~~~~~~~~~~ 70 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLK--TSS--NYSVTVA--DHD----LAALAVLNRMGVATKQVDA---KDEAGLAKALGGF 70 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHH--HCS--SEEEEEE--ESC----HHHHHHHHTTTCEEEECCT---TCHHHHHHHTTTC
T ss_pred CcCeEEEECCCHHHHHHHHHHH--hCC--CceEEEE--eCC----HHHHHHHHhCCCcEEEecC---CCHHHHHHHHcCC
Confidence 346888887632 233322222 223 2565433 231 1123333466777665442 1234566677789
Q ss_pred CEEEEEe
Q 018502 206 DFLVLAR 212 (355)
Q Consensus 206 Dlivla~ 212 (355)
|++|.+.
T Consensus 71 d~vi~~~ 77 (118)
T 3ic5_A 71 DAVISAA 77 (118)
T ss_dssp SEEEECS
T ss_pred CEEEECC
Confidence 9998654
No 158
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=38.78 E-value=28 Score=30.40 Aligned_cols=67 Identities=10% Similarity=0.127 Sum_probs=38.8
Q ss_pred CceEEEEEeCC-chhHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeCCCCChhHHHHHHHhcCCC
Q 018502 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTD 206 (355)
Q Consensus 128 ~~riavl~S~~-g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l~~~D 206 (355)
++||+|++.|. |..+...|.. .| .++..+ .+++ ...+.++++++|+.... . + . +.+.++|
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~--~g---~~V~~v-~~r~---~~~~~~l~~~~g~~~~~-~---~--~----~~~~~aD 83 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTA--AQ---IPAIIA-NSRG---PASLSSVTDRFGASVKA-V---E--L----KDALQAD 83 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHH--TT---CCEEEE-CTTC---GGGGHHHHHHHTTTEEE-C---C--H----HHHTTSS
T ss_pred CCEEEEECCCHHHHHHHHHHHh--CC---CEEEEE-ECCC---HHHHHHHHHHhCCCccc-C---h--H----HHHhcCC
Confidence 47999999765 4444333322 23 466543 4442 23466777888876543 1 1 1 1245799
Q ss_pred EEEEEee
Q 018502 207 FLVLARY 213 (355)
Q Consensus 207 livla~y 213 (355)
+++++--
T Consensus 84 vVilavp 90 (220)
T 4huj_A 84 VVILAVP 90 (220)
T ss_dssp EEEEESC
T ss_pred EEEEeCC
Confidence 9998853
No 159
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=38.54 E-value=20 Score=27.22 Aligned_cols=42 Identities=19% Similarity=0.330 Sum_probs=25.6
Q ss_pred HHHhhhhcCCCCeEEEEEEeCCCCCCC--chHHHHHHHCCCCeEEeCC
Q 018502 144 DFLYGWQEGKLPVEITCVISNHDRGPN--SHVIRFLERHGIPYHYLCA 189 (355)
Q Consensus 144 ~ll~~~~~~~l~~eI~~Vis~~~~~~~--~~v~~~a~~~gIP~~~~~~ 189 (355)
..+..++.|+ +..+. +++. -.++ ..+..+|++++||++++++
T Consensus 18 ~v~kai~~gk--aklVi-iA~D-~~~~~~~~i~~lc~~~~Ip~~~v~s 61 (82)
T 3v7e_A 18 QTVKALKRGS--VKEVV-VAKD-ADPILTSSVVSLAEDQGISVSMVES 61 (82)
T ss_dssp HHHHHHTTTC--EEEEE-EETT-SCHHHHHHHHHHHHHHTCCEEEESC
T ss_pred HHHHHHHcCC--eeEEE-EeCC-CCHHHHHHHHHHHHHcCCCEEEECC
Confidence 3445555563 55543 3332 2122 3578899999999999874
No 160
>1k92_A Argininosuccinate synthase, argininosuccinate SY; N-type ATP pyrophosphatase, ligase; 1.60A {Escherichia coli} SCOP: c.26.2.1 d.210.1.1 PDB: 1k97_A* 1kp2_A* 1kp3_A*
Probab=38.13 E-value=56 Score=32.84 Aligned_cols=58 Identities=7% Similarity=-0.049 Sum_probs=40.3
Q ss_pred CCCceEEEEEeCCc--hhHHHHHhhhhcCCCCeEEEEEEeCCCCC---CCchHHHHHHHCCC-CeEEeC
Q 018502 126 DPKYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRG---PNSHVIRFLERHGI-PYHYLC 188 (355)
Q Consensus 126 ~~~~riavl~S~~g--~~L~~ll~~~~~~~l~~eI~~Vis~~~~~---~~~~v~~~a~~~gI-P~~~~~ 188 (355)
.+..||++..||.- +++..+|.. . ..+|.+|..++... .-..+.+.|++.|| |++.++
T Consensus 8 ~~~~KVvVA~SGGlDSSvll~~L~e--~---G~eViavtvd~Gq~~~~ele~a~~~A~~lGi~~~~vvD 71 (455)
T 1k92_A 8 PVGQRIGIAFSGGLDTSAALLWMRQ--K---GAVPYAYTANLGQPDEEDYDAIPRRAMEYGAENARLID 71 (455)
T ss_dssp CTTSEEEEECCSSHHHHHHHHHHHH--T---TCEEEEEEEECCCTTCSCTTHHHHHHHHHTCSEEEEEE
T ss_pred cCCCeEEEEEcChHHHHHHHHHHHH--c---CCEEEEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEe
Confidence 45679999999873 344445543 2 47898888877532 12478999999999 777665
No 161
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=37.82 E-value=34 Score=32.26 Aligned_cols=67 Identities=10% Similarity=0.093 Sum_probs=37.0
Q ss_pred CCceEEEEEeCC-chhHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeCCCCChhHHHHHHHhc--
Q 018502 127 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ-- 203 (355)
Q Consensus 127 ~~~riavl~S~~-g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l~-- 203 (355)
++.||+|++.|. |.. .+..++.. -.+++++|+.... .-.+.|+++|++++ . .+.+++.
T Consensus 4 ~~~~vgiiG~G~~g~~---~~~~l~~~-~~~~l~av~d~~~-----~~~~~a~~~g~~~~--~--------~~~~ll~~~ 64 (359)
T 3e18_A 4 KKYQLVIVGYGGMGSY---HVTLASAA-DNLEVHGVFDILA-----EKREAAAQKGLKIY--E--------SYEAVLADE 64 (359)
T ss_dssp CCEEEEEECCSHHHHH---HHHHHHTS-TTEEEEEEECSSH-----HHHHHHHTTTCCBC--S--------CHHHHHHCT
T ss_pred CcCcEEEECcCHHHHH---HHHHHHhC-CCcEEEEEEcCCH-----HHHHHHHhcCCcee--C--------CHHHHhcCC
Confidence 358999998765 222 22222221 1488988876432 23456778888653 1 1223333
Q ss_pred CCCEEEEEe
Q 018502 204 NTDFLVLAR 212 (355)
Q Consensus 204 ~~Dlivla~ 212 (355)
++|+|+++.
T Consensus 65 ~~D~V~i~t 73 (359)
T 3e18_A 65 KVDAVLIAT 73 (359)
T ss_dssp TCCEEEECS
T ss_pred CCCEEEEcC
Confidence 577777654
No 162
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=36.64 E-value=1.4e+02 Score=26.68 Aligned_cols=119 Identities=8% Similarity=0.085 Sum_probs=63.3
Q ss_pred HHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHHHHhhhh-------hccc---eeeeCCCCCCceE
Q 018502 62 CIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFN-------AMRS---VVRVPDIDPKYKV 131 (355)
Q Consensus 62 ~La~~g~NIld~~q~id~~~g~F~Mr~~v~~~~~~~~~~~L~~~l~~la~~lg-------~~~~---~~~~~~~~~~~ri 131 (355)
.|.+.|...+.+++-.. ...++.++++++|.-+++ +| +..- --++-..+++.||
T Consensus 24 ~l~~~g~~~isS~ela~---------------~~gv~~~qiRkDls~fg~-~G~~g~GY~V~~L~~~i~~~Lg~~~~~~V 87 (212)
T 3keo_A 24 RFNTDGIEKASSKQIAD---------------ALGIDSATVRRDFSYFGE-LGRRGFGYDVKKLMNFFAEILNDHSTTNV 87 (212)
T ss_dssp HHHHTTCCEECHHHHHH---------------HHTSCHHHHHHHHHTTGG-GTTTSSSEEHHHHHHHHHHHTTTTSCEEE
T ss_pred HHHHCCCeEECHHHHHH---------------HHCCCHHHHHHHHHHHhh-cCCCCCCEEHHHHHHHHHHHhCCCCCCEE
Confidence 45556666666555321 124567777777766542 22 1000 0001224566788
Q ss_pred EEEEeCCchhHHHHHhhhhcCCCCeEEEEEEeCCCC-CCCchHHHHHHHCCCCeEEeCCCCChhHHHHHHHhc--CCCEE
Q 018502 132 AVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDR-GPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ--NTDFL 208 (355)
Q Consensus 132 avl~S~~g~~L~~ll~~~~~~~l~~eI~~Vis~~~~-~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l~--~~Dli 208 (355)
++.+.|. .-.+|+..........++++++-..++ ..+ . +.-+|+|++..+ ++.++++ ++|.+
T Consensus 88 ~IvGaG~--lG~aLa~~~~~~~~g~~iVg~~D~dp~~kiG---~--~~i~GvpV~~~~--------dL~~~v~~~~Id~v 152 (212)
T 3keo_A 88 MLVGCGN--IGRALLHYRFHDRNKMQISMAFDLDSNDLVG---K--TTEDGIPVYGIS--------TINDHLIDSDIETA 152 (212)
T ss_dssp EEECCSH--HHHHHTTCCCCTTSSEEEEEEEECTTSTTTT---C--BCTTCCBEEEGG--------GHHHHC-CCSCCEE
T ss_pred EEECcCH--HHHHHHHhhhcccCCeEEEEEEeCCchhccC---c--eeECCeEEeCHH--------HHHHHHHHcCCCEE
Confidence 8887644 334444432222346899999976543 111 0 113689987532 3556665 68999
Q ss_pred EEE
Q 018502 209 VLA 211 (355)
Q Consensus 209 vla 211 (355)
++|
T Consensus 153 IIA 155 (212)
T 3keo_A 153 ILT 155 (212)
T ss_dssp EEC
T ss_pred EEe
Confidence 876
No 163
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=36.56 E-value=42 Score=31.68 Aligned_cols=71 Identities=13% Similarity=0.092 Sum_probs=35.6
Q ss_pred CCCceEEEEEeCC-chhHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeCCCCChhHHHHHHHhcC
Q 018502 126 DPKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQN 204 (355)
Q Consensus 126 ~~~~riavl~S~~-g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l~~ 204 (355)
.+++||+|+++|. |+.....|. . ..+|..+-.+. .-++.+++ .++...++. .+.+++.+++++
T Consensus 14 g~~mkilvlGaG~vG~~~~~~L~---~---~~~v~~~~~~~------~~~~~~~~-~~~~~~~d~---~d~~~l~~~~~~ 77 (365)
T 3abi_A 14 GRHMKVLILGAGNIGRAIAWDLK---D---EFDVYIGDVNN------ENLEKVKE-FATPLKVDA---SNFDKLVEVMKE 77 (365)
T ss_dssp --CCEEEEECCSHHHHHHHHHHT---T---TSEEEEEESCH------HHHHHHTT-TSEEEECCT---TCHHHHHHHHTT
T ss_pred CCccEEEEECCCHHHHHHHHHHh---c---CCCeEEEEcCH------HHHHHHhc-cCCcEEEec---CCHHHHHHHHhC
Confidence 4678999998754 343333332 2 24554322111 11222322 233333332 234567778888
Q ss_pred CCEEEEEe
Q 018502 205 TDFLVLAR 212 (355)
Q Consensus 205 ~Dlivla~ 212 (355)
+|+||.+.
T Consensus 78 ~DvVi~~~ 85 (365)
T 3abi_A 78 FELVIGAL 85 (365)
T ss_dssp CSEEEECC
T ss_pred CCEEEEec
Confidence 99988763
No 164
>3bl5_A Queuosine biosynthesis protein QUEC; PREQ1 biosynthesis, RNA modification, tRNA, hydrolase; 2.95A {Bacillus subtilis}
Probab=35.99 E-value=69 Score=27.34 Aligned_cols=55 Identities=18% Similarity=0.131 Sum_probs=35.3
Q ss_pred ceEEEEEeCC-chh-HHHHHhhhhcCCCCeEEEEEEeCCCCCCC---chHHHHHHHCCCCeEEeC
Q 018502 129 YKVAVLASKQ-EHC-LVDFLYGWQEGKLPVEITCVISNHDRGPN---SHVIRFLERHGIPYHYLC 188 (355)
Q Consensus 129 ~riavl~S~~-g~~-L~~ll~~~~~~~l~~eI~~Vis~~~~~~~---~~v~~~a~~~gIP~~~~~ 188 (355)
.||+|..||. .|. +..++.. .+ .++.+|..++..... ..+.++|++.|||++.++
T Consensus 4 ~~v~v~lSGG~DS~~ll~ll~~--~~---~~v~~~~~~~~~~~~~e~~~a~~~a~~lgi~~~~~~ 63 (219)
T 3bl5_A 4 EKAIVVFSGGQDSTTCLLWALK--EF---EEVETVTFHYNQRHSQEVEVAKSIAEKLGVKNHLLD 63 (219)
T ss_dssp CEEEEECCSSHHHHHHHHHHHH--HC---SEEEEEEEESSCTTCHHHHHHHHHHHTTCCCEEEEE
T ss_pred CCEEEEccCcHHHHHHHHHHHH--cC---CceEEEEEeCCCCCHHHHHHHHHHHHHhCCCeEEEe
Confidence 5899999986 343 3334433 23 467777666532221 256788999999998876
No 165
>3brv_A Inhibitor of nuclear factor kappa-B kinase subuni; NEMO, IKK-gamma, FIP3, ikkap1, NF-KB essential modulator, at binding, kinase, nucleotide-binding, phosphoprotein; 2.20A {Synthetic} PDB: 3brt_A
Probab=35.84 E-value=13 Score=26.31 Aligned_cols=30 Identities=23% Similarity=0.334 Sum_probs=25.9
Q ss_pred chhhhhhhhhhhhhhccccccccCCCCccc
Q 018502 3 LLRRLSSSLQQVVKFTNRSFKSLKFPGEPI 32 (355)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 (355)
+++||+|.+|+..+=+..|+-+|.+-+++-
T Consensus 18 ~~~~L~sliqdt~~eq~~Slm~lDwSWL~~ 47 (48)
T 3brv_A 18 LCTLLENAIQDTVREQDQSFTALDWSWLQT 47 (48)
T ss_dssp HHHHHHHHHHHHHHHTTSCGGGSCCGGGC-
T ss_pred HHHHHHHHHHHHHHHHhcchhhhhhhhhcc
Confidence 578999999999999999999998877653
No 166
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=35.26 E-value=1.6e+02 Score=23.15 Aligned_cols=79 Identities=15% Similarity=0.250 Sum_probs=43.8
Q ss_pred ceEEEEEeCC-chhHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeCCCCChhHHHHHHHhcCCCE
Q 018502 129 YKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTDF 207 (355)
Q Consensus 129 ~riavl~S~~-g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l~~~Dl 207 (355)
.+|++++.-. ..++..+++.+..=+-..++..++..... ....+.+.++++++.+.. .. ...+++.+++.++|+
T Consensus 3 ~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~l~i~G~g~-~~~~~~~~~~~~~~~v~~-g~---~~~~~~~~~~~~adv 77 (166)
T 3qhp_A 3 FKIAMVGRYSNEKNQSVLIKAVALSKYKQDIVLLLKGKGP-DEKKIKLLAQKLGVKAEF-GF---VNSNELLEILKTCTL 77 (166)
T ss_dssp EEEEEESCCSTTTTHHHHHHHHHTCTTGGGEEEEEECCST-THHHHHHHHHHHTCEEEC-CC---CCHHHHHHHHTTCSE
T ss_pred eEEEEEeccchhcCHHHHHHHHHHhccCCCeEEEEEeCCc-cHHHHHHHHHHcCCeEEE-ee---cCHHHHHHHHHhCCE
Confidence 3444444322 24566666665421111245555554321 134678889999985444 31 224678888889999
Q ss_pred EEEEe
Q 018502 208 LVLAR 212 (355)
Q Consensus 208 ivla~ 212 (355)
+|+..
T Consensus 78 ~v~ps 82 (166)
T 3qhp_A 78 YVHAA 82 (166)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 97543
No 167
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=35.25 E-value=2.2e+02 Score=26.43 Aligned_cols=53 Identities=6% Similarity=0.023 Sum_probs=31.6
Q ss_pred CCceEEEEEeCC-ch--hHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeC
Q 018502 127 PKYKVAVLASKQ-EH--CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (355)
Q Consensus 127 ~~~riavl~S~~-g~--~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~ 188 (355)
+++||+++..+. || .+..|..+++.. .++|+.+.+.. ..+..+..|++++.++
T Consensus 11 ~~~~Il~~~~~~~GHv~p~l~la~~L~~~--Gh~V~~~~~~~-------~~~~~~~~g~~~~~~~ 66 (424)
T 2iya_A 11 TPRHISFFNIPGHGHVNPSLGIVQELVAR--GHRVSYAITDE-------FAAQVKAAGATPVVYD 66 (424)
T ss_dssp CCCEEEEECCSCHHHHHHHHHHHHHHHHT--TCEEEEEECGG-------GHHHHHHHTCEEEECC
T ss_pred ccceEEEEeCCCCcccchHHHHHHHHHHC--CCeEEEEeCHH-------HHHHHHhCCCEEEecC
Confidence 357899875443 55 344555555432 47887654432 2456677788877665
No 168
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=35.22 E-value=61 Score=30.03 Aligned_cols=73 Identities=18% Similarity=0.296 Sum_probs=44.1
Q ss_pred ceEEEEEe-----CCchhHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeCCCCChhHHHHHHHhc
Q 018502 129 YKVAVLAS-----KQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 203 (355)
Q Consensus 129 ~riavl~S-----~~g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l~ 203 (355)
+||+|.+- |.||-.+.|--+ .+|. ++.++...++ + .+.++.|.|+..++. ...+++.++++
T Consensus 1 mki~ir~Da~~~IG~GHvmRcl~LA---~~l~-~v~F~~~~~~-~------~~~~~~g~~v~~l~~---~d~~~~~~~l~ 66 (282)
T 3hbm_A 1 MKVLFRSDSSSQIGFGHIKRDLVLA---KQYS-DVSFACLPLE-G------SLIDEIPYPVYELSS---ESIYELINLIK 66 (282)
T ss_dssp CCEEEEECCBTTTBSHHHHHHHHHH---TTCS-SEEEEECCCT-T------CCGGGCCSCEEECSS---SCHHHHHHHHH
T ss_pred CEEEEEEecCCCccccHHHHHHHHH---HHHH-hCEEEEecCc-H------hHHHHCCCeEEEcCc---cCHHHHHHHHH
Confidence 46777774 336755554322 2333 6766654432 1 123344888887763 23456777776
Q ss_pred --CCCEEEEEeecc
Q 018502 204 --NTDFLVLARYMQ 215 (355)
Q Consensus 204 --~~Dlivla~y~~ 215 (355)
++|++|+-+|.-
T Consensus 67 ~~~~d~lIvD~Y~~ 80 (282)
T 3hbm_A 67 EEKFELLIIDHYGI 80 (282)
T ss_dssp HHTCSEEEEECTTC
T ss_pred hCCCCEEEEECCCC
Confidence 899999999974
No 169
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis}
Probab=34.93 E-value=98 Score=27.67 Aligned_cols=70 Identities=13% Similarity=0.130 Sum_probs=41.3
Q ss_pred HHHHHHHCCCCe--EEeCCCCChhHHHHHHHhc--CCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCC
Q 018502 173 VIRFLERHGIPY--HYLCAKENEREEELLELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILS 248 (355)
Q Consensus 173 v~~~a~~~gIP~--~~~~~~~~~~~~~~~~~l~--~~Dlivla~y~~~~~~~~~~~~~~~~~~~~~~~~~~s~y~~~il~ 248 (355)
+.++++++|++. ..+. . ....+++.+..+ ++|++|+..+.+.- +.++-++ =..
T Consensus 233 l~~~~~~~~~~~~~~~v~-~-g~~~~~I~~~a~~~~~dLiV~G~~g~~~------~~~~~~G---------------sv~ 289 (319)
T 3olq_A 233 MKELRQKFSIPEEKTHVK-E-GLPEQVIPQVCEELNAGIVVLGILGRTG------LSAAFLG---------------NTA 289 (319)
T ss_dssp HHHHHHHTTCCGGGEEEE-E-SCHHHHHHHHHHHTTEEEEEEECCSCCS------THHHHHH---------------HHH
T ss_pred HHHHHHHhCCCcccEEEe-c-CCcHHHHHHHHHHhCCCEEEEeccCccC------Ccccccc---------------HHH
Confidence 456778899862 1111 1 233567777776 79999999987711 0000000 234
Q ss_pred hHHHhhcCCCeEEecCC
Q 018502 249 GKFLRSYGKDVINIHHG 265 (355)
Q Consensus 249 ~~~l~~~~~~~INiHps 265 (355)
.+++...+.+++-++|.
T Consensus 290 ~~vl~~~~~pVLvv~~~ 306 (319)
T 3olq_A 290 EQLIDHIKCDLLAIKPD 306 (319)
T ss_dssp HHHHTTCCSEEEEECCT
T ss_pred HHHHhhCCCCEEEECCC
Confidence 56777777777777764
No 170
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=33.57 E-value=60 Score=31.60 Aligned_cols=51 Identities=14% Similarity=0.247 Sum_probs=30.8
Q ss_pred CCCceEEEEEeCCchhHH-HHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCC
Q 018502 126 DPKYKVAVLASKQEHCLV-DFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIP 183 (355)
Q Consensus 126 ~~~~riavl~S~~g~~L~-~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP 183 (355)
.++.||+|++.|. --. .++..+... -.+++++|+.... ....++++++|+|
T Consensus 81 ~~~irigiIG~G~--~g~~~~~~~l~~~-~~~~lvav~d~~~----~~~~~~a~~~g~~ 132 (433)
T 1h6d_A 81 DRRFGYAIVGLGK--YALNQILPGFAGC-QHSRIEALVSGNA----EKAKIVAAEYGVD 132 (433)
T ss_dssp CCCEEEEEECCSH--HHHHTHHHHTTTC-SSEEEEEEECSCH----HHHHHHHHHTTCC
T ss_pred CCceEEEEECCcH--HHHHHHHHHHhhC-CCcEEEEEEcCCH----HHHHHHHHHhCCC
Confidence 3467999988754 221 234433321 1478888776432 2466788899987
No 171
>2lxf_A Uncharacterized protein; beaver fever, giardiasis, seattle structural genomics center infectious disease, ssgcid, structural genomics; NMR {Giardia lamblia}
Probab=33.47 E-value=56 Score=27.01 Aligned_cols=59 Identities=12% Similarity=0.040 Sum_probs=43.4
Q ss_pred HHHHHHHHHhhhhhccceeeeCCCCCCceEEEEEeCCchhHHHHHhhhhcCCCCeEEEEEEeC
Q 018502 102 MDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISN 164 (355)
Q Consensus 102 L~~~l~~la~~lg~~~~~~~~~~~~~~~riavl~S~~g~~L~~ll~~~~~~~l~~eI~~Vis~ 164 (355)
++.-...+|.++|+.-|+.+..| - +|-+.+.|....+..++..++.|...+.|..|-..
T Consensus 49 FR~~v~~~A~~lgL~G~VrN~~d--G--~Vei~~eG~~~~v~~f~~~l~~gPp~A~V~~v~~~ 107 (121)
T 2lxf_A 49 FRKYTKKEADALSLVGYVTNNED--G--SVSGVVQGPKEQVDAFVKYLHKGSPKSVVKKVSIH 107 (121)
T ss_dssp CHHHHHHHHHHHTCEEEEEECTT--S--CEEEEEEEEHHHHHHHHHHHHHCCTTCCEEEEEEE
T ss_pred chHHHHHHHHHcCCEEEEEECCC--C--CEEEEEEECHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence 46677788899999877544433 2 47778888888899999988888655788776543
No 172
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=33.13 E-value=1.3e+02 Score=27.84 Aligned_cols=52 Identities=12% Similarity=0.212 Sum_probs=32.5
Q ss_pred CCceEEEEEeCC-ch--hHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeC
Q 018502 127 PKYKVAVLASKQ-EH--CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (355)
Q Consensus 127 ~~~riavl~S~~-g~--~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~ 188 (355)
+++||+++..+. || .+..|...++.. .++|..+ +. . ..+..+..|+++..++
T Consensus 19 ~~MrIl~~~~~~~Ghv~~~~~La~~L~~~--GheV~v~-~~-~------~~~~~~~~G~~~~~~~ 73 (398)
T 3oti_A 19 RHMRVLFVSSPGIGHLFPLIQLAWGFRTA--GHDVLIA-VA-E------HADRAAAAGLEVVDVA 73 (398)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHHT--TCEEEEE-ES-S------CHHHHHTTTCEEEESS
T ss_pred hcCEEEEEcCCCcchHhHHHHHHHHHHHC--CCEEEEe-cc-c------hHHHHHhCCCeeEecC
Confidence 457999887443 44 234555555432 4788754 43 2 2567788999988776
No 173
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=32.05 E-value=1.4e+02 Score=27.20 Aligned_cols=50 Identities=14% Similarity=0.129 Sum_probs=29.1
Q ss_pred CCceEEEEEeCC-chhHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCC
Q 018502 127 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIP 183 (355)
Q Consensus 127 ~~~riavl~S~~-g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP 183 (355)
+++||+|++.|. |.. .++..+.. .-.+++++|+.... ....++++++|+|
T Consensus 4 ~~~~vgiiG~G~~g~~--~~~~~l~~-~~~~~lvav~d~~~----~~~~~~~~~~g~~ 54 (319)
T 1tlt_A 4 KKLRIGVVGLGGIAQK--AWLPVLAA-ASDWTLQGAWSPTR----AKALPICESWRIP 54 (319)
T ss_dssp -CEEEEEECCSTHHHH--THHHHHHS-CSSEEEEEEECSSC----TTHHHHHHHHTCC
T ss_pred CcceEEEECCCHHHHH--HHHHHHHh-CCCeEEEEEECCCH----HHHHHHHHHcCCC
Confidence 357999998865 321 02222221 11478888776442 2356778888888
No 174
>3q98_A Transcarbamylase; rossmann fold, transferase; 2.00A {Escherichia coli}
Probab=31.92 E-value=1.7e+02 Score=28.72 Aligned_cols=129 Identities=10% Similarity=0.092 Sum_probs=64.8
Q ss_pred CceEEEEEe-----CCchh-HHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHH----HHHHHCCCCeEEeCCCCChhHHH
Q 018502 128 KYKVAVLAS-----KQEHC-LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVI----RFLERHGIPYHYLCAKENEREEE 197 (355)
Q Consensus 128 ~~riavl~S-----~~g~~-L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~----~~a~~~gIP~~~~~~~~~~~~~~ 197 (355)
..||++.+- |.+.+ ...++..+. .+++++.. ++...-.+...+. ++|++.|..+.... +
T Consensus 191 Glkva~vgd~~~~~G~~nnVa~Sli~~~~--~lG~~v~~-~~P~~~~~~~~~~~~a~~~a~~~G~~i~~~~--------d 259 (399)
T 3q98_A 191 GKKIAMTWAYSPSYGKPLSVPQGIIGLMT--RFGMDVTL-AHPEGYDLIPDVVEVAKNNAKASGGSFRQVT--------S 259 (399)
T ss_dssp TCEEEEECCCCSSCCCCTHHHHHHHHHHG--GGTCEEEE-ECCTTCCCCHHHHHHHHHHHHHHTCEEEEES--------C
T ss_pred CCEEEEEEecccccCcchHHHHHHHHHHH--HcCCEEEE-ECCcccCCCHHHHHHHHHHHHHcCCEEEEEc--------C
Confidence 457887752 33322 244444331 23466543 3332111122333 34567787776543 1
Q ss_pred HHHHhcCCCEEEEEeeccccchhhHhhh-----hhhhhhhhcc--cCcccccccccCChHHHhhcCC-CeEEecCCCCCC
Q 018502 198 LLELVQNTDFLVLARYMQPVPLQKEAYL-----GYKLLESLSS--KGSLTSYFNMILSGKFLRSYGK-DVINIHHGLLPS 269 (355)
Q Consensus 198 ~~~~l~~~Dlivla~y~~~~~~~~~~~~-----~~~~~~~~~~--~~~~s~y~~~il~~~~l~~~~~-~~INiHpslLP~ 269 (355)
+.+.+.++|+|.+-.|.. .-.|.|-+- +|.-++..+. .-+.-.+-+|.+..++++..+. .+|=+|| ||+
T Consensus 260 ~~eav~~aDvVytd~W~S-mg~~~er~~~~~~~~~~~~~~~e~~~~~r~~~~~~yqVn~elm~~a~~~daifMHc--LPa 336 (399)
T 3q98_A 260 MEEAFKDADIVYPKSWAP-YKVMEERTELLRANDHEGLKALEKQCLAQNAQHKDWHCTEEMMELTRDGEALYMHC--LPA 336 (399)
T ss_dssp HHHHHTTCSEEEECCCCC-HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTTTCCBCHHHHHTSGGGCCEECCC--SSC
T ss_pred HHHHhCCCCEEEecCccc-cchhhhhhhhccccchhhhhhhhhhhhHHHHHccCcEECHHHHhhcCCCCcEEECC--CCC
Confidence 345566899998887742 001222110 1110000000 0011223468899999987753 7999999 588
Q ss_pred C
Q 018502 270 F 270 (355)
Q Consensus 270 y 270 (355)
+
T Consensus 337 ~ 337 (399)
T 3q98_A 337 D 337 (399)
T ss_dssp C
T ss_pred C
Confidence 8
No 175
>2e18_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, NPPSFA, national project on Pro structural and functional analyses; 2.10A {Pyrococcus horikoshii}
Probab=31.90 E-value=1.2e+02 Score=27.12 Aligned_cols=58 Identities=16% Similarity=0.062 Sum_probs=36.8
Q ss_pred CceEEEEEeCC-chhHH-HHHhhhhcCCCCeEEEEEEeCCCCCC-CchHHHHHHHCCCCeEEeC
Q 018502 128 KYKVAVLASKQ-EHCLV-DFLYGWQEGKLPVEITCVISNHDRGP-NSHVIRFLERHGIPYHYLC 188 (355)
Q Consensus 128 ~~riavl~S~~-g~~L~-~ll~~~~~~~l~~eI~~Vis~~~~~~-~~~v~~~a~~~gIP~~~~~ 188 (355)
..+|++..||. .|.+. .++... -| +.++.+|..++.... ...+.++|++.|||++.++
T Consensus 22 ~~~vvv~lSGGiDSs~~~~l~~~~-~g--~~~v~av~~~~~~~~~~~~a~~~a~~lgi~~~~i~ 82 (257)
T 2e18_A 22 NNGVVIGISGGVDSATVAYLATKA-LG--KEKVLGLIMPYFENKDVEDAKLVAEKLGIGYKVIN 82 (257)
T ss_dssp TTCEEEECCSSHHHHHHHHHHHHH-HC--GGGEEEEECCSSCSTHHHHHHHHHHHHTCEEEECC
T ss_pred CCcEEEEecCCHHHHHHHHHHHHh-cC--CCcEEEEEeCCCCchHHHHHHHHHHHhCCCEEEEE
Confidence 35899999986 35433 343332 12 246777777764211 1357888999999998876
No 176
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=31.79 E-value=2.8e+02 Score=24.79 Aligned_cols=82 Identities=13% Similarity=0.183 Sum_probs=41.0
Q ss_pred CCceEEEEEeCCch--hHHHHHhhhhcCCCC-eEEEEEEeCCCCCCCchHHHHHHHCCCCe-EEeCC--C-CCh-h----
Q 018502 127 PKYKVAVLASKQEH--CLVDFLYGWQEGKLP-VEITCVISNHDRGPNSHVIRFLERHGIPY-HYLCA--K-ENE-R---- 194 (355)
Q Consensus 127 ~~~riavl~S~~g~--~L~~ll~~~~~~~l~-~eI~~Vis~~~~~~~~~v~~~a~~~gIP~-~~~~~--~-~~~-~---- 194 (355)
+++||++++...+. ....++..++.. -. +++..+++... .....+..+.++++. ..+.. + .+. .
T Consensus 7 ~~mkIl~v~~~~~~~~~~~~l~~~L~~~-~~~~~v~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (375)
T 3beo_A 7 ERLKVMTIFGTRPEAIKMAPLVLELQKH-PEKIESIVTVTAQH---RQMLDQVLSIFGITPDFDLNIMKDRQTLIDITTR 82 (375)
T ss_dssp SCEEEEEEECSHHHHHHHHHHHHHHTTC-TTTEEEEEEECCSS---SHHHHHHHHHHTCCCSEECCCCCTTCCHHHHHHH
T ss_pred cCceEEEEecCcHHHHHHHHHHHHHHhC-CCCCCeEEEEcCCC---HHHHHHHHHHcCCCCccccccCCCcccHHHHHHH
Confidence 45899988743322 334555555432 12 67766665442 112334445577765 22221 1 111 0
Q ss_pred -HHHHHHHhc--CCCEEEEEe
Q 018502 195 -EEELLELVQ--NTDFLVLAR 212 (355)
Q Consensus 195 -~~~~~~~l~--~~Dlivla~ 212 (355)
-..+.++++ ++|++++.+
T Consensus 83 ~~~~l~~~l~~~~pDvv~~~~ 103 (375)
T 3beo_A 83 GLEGLDKVMKEAKPDIVLVHG 103 (375)
T ss_dssp HHHHHHHHHHHHCCSEEEEET
T ss_pred HHHHHHHHHHHhCCCEEEEeC
Confidence 123555555 899998743
No 177
>2j5a_A 30S ribosomal protein S6; ribonucleoprotein, RIBO protein S6, RNA-binding, rRNA-binding, protein folding; 2.3A {Aquifex aeolicus} SCOP: d.58.14.1
Probab=31.74 E-value=1.3e+02 Score=23.90 Aligned_cols=60 Identities=17% Similarity=0.246 Sum_probs=38.6
Q ss_pred EEEEEcCC-----ccchHHHHHHHHHhcCCeEeEeeeec---------cCCCCeEEEEEEEEe-CCCCCChHHHHHHH
Q 018502 44 IHVFHCPD-----EVGIVAKLSECIASRGGNILAADVFV---------PEKKNVFYSRSEFIF-DPIKWPREQMDEDF 106 (355)
Q Consensus 44 ILTV~GpD-----r~GIVA~VS~~La~~g~NIld~~q~i---------d~~~g~F~Mr~~v~~-~~~~~~~~~L~~~l 106 (355)
++.+.=|| ...++..+.+.|.++||.|.+++.-. ....|.|+ .+.|+. +.. ..++|...|
T Consensus 12 ~~~Il~p~l~~e~~~~~v~~~~~~i~~~Gg~i~~~e~wG~R~LAY~I~K~~~G~Y~-l~~f~a~~~~--~i~eler~l 86 (110)
T 2j5a_A 12 TVFAVKPTLSEEEMKKKFEQVKEFIKQKGGEILYEEDWGMRQLAYPIQKFNNARYF-LVQFKTENPQ--LPNELDFQL 86 (110)
T ss_dssp EEEEECTTSCHHHHHHHHHHHHHHHHHTTEEEEEEEEEEEEECSSCSSSCSEEEEE-EEEEEESCTT--HHHHHHHHH
T ss_pred EEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEeecCcccccCcCCCCEEEEE-EEEEEeCCHH--HHHHHHHHh
Confidence 44445565 35899999999999999999877532 12345555 677777 532 344444433
No 178
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=31.66 E-value=1.9e+02 Score=26.29 Aligned_cols=52 Identities=10% Similarity=0.042 Sum_probs=32.0
Q ss_pred CceEEEEEeCC-chh--HHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeC
Q 018502 128 KYKVAVLASKQ-EHC--LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (355)
Q Consensus 128 ~~riavl~S~~-g~~--L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~ 188 (355)
++||+++..+. ||- +..|...++.. .++|+.+ +.. ...+..++.|+++..++
T Consensus 4 M~~il~~~~~~~Ghv~~~~~La~~L~~~--GheV~v~-~~~------~~~~~~~~~G~~~~~~~ 58 (402)
T 3ia7_A 4 QRHILFANVQGHGHVYPSLGLVSELARR--GHRITYV-TTP------LFADEVKAAGAEVVLYK 58 (402)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHHHHT--TCEEEEE-ECH------HHHHHHHHTTCEEEECC
T ss_pred CCEEEEEeCCCCcccccHHHHHHHHHhC--CCEEEEE-cCH------HHHHHHHHcCCEEEecc
Confidence 35898877553 442 33444444332 4788754 432 35677888999988776
No 179
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=31.55 E-value=1e+02 Score=28.15 Aligned_cols=70 Identities=13% Similarity=0.116 Sum_probs=36.6
Q ss_pred CceEEEEEeCCchhHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeCCCCChhHHHHHHHhcCCCE
Q 018502 128 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTDF 207 (355)
Q Consensus 128 ~~riavl~S~~g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l~~~Dl 207 (355)
++||+|++.|.- -..++..+... -..++++|+.... ....++++++|++..+ . .-++++ -.++|+
T Consensus 1 ~~~vgiiG~G~~--g~~~~~~l~~~-~~~~~~~v~d~~~----~~~~~~~~~~~~~~~~-~-----~~~~~l--~~~~D~ 65 (325)
T 2ho3_A 1 MLKLGVIGTGAI--SHHFIEAAHTS-GEYQLVAIYSRKL----ETAATFASRYQNIQLF-D-----QLEVFF--KSSFDL 65 (325)
T ss_dssp CEEEEEECCSHH--HHHHHHHHHHT-TSEEEEEEECSSH----HHHHHHGGGSSSCEEE-S-----CHHHHH--TSSCSE
T ss_pred CeEEEEEeCCHH--HHHHHHHHHhC-CCeEEEEEEeCCH----HHHHHHHHHcCCCeEe-C-----CHHHHh--CCCCCE
Confidence 368999987641 12223332221 1478888765432 2355677788875433 1 112222 026777
Q ss_pred EEEEe
Q 018502 208 LVLAR 212 (355)
Q Consensus 208 ivla~ 212 (355)
|+++.
T Consensus 66 V~i~t 70 (325)
T 2ho3_A 66 VYIAS 70 (325)
T ss_dssp EEECS
T ss_pred EEEeC
Confidence 77664
No 180
>4etn_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.10A {Bacillus subtilis} PDB: 4eti_A 1zgg_A
Probab=30.93 E-value=1.1e+02 Score=26.68 Aligned_cols=82 Identities=13% Similarity=0.198 Sum_probs=42.9
Q ss_pred CCceEEEEEeCCc--hhH-HHHHhhhhcC-CCCeEE--EEEEeCCCCCCCchHHHHHHHCCCCeEEeCCCCChhHHHHHH
Q 018502 127 PKYKVAVLASKQE--HCL-VDFLYGWQEG-KLPVEI--TCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLE 200 (355)
Q Consensus 127 ~~~riavl~S~~g--~~L-~~ll~~~~~~-~l~~eI--~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~ 200 (355)
+++||.|+.+|+- |.+ +.++.....+ .+..+| .++-..+..+.+...++.++++||++. ...+ ... ++.
T Consensus 33 ~~~~VLFVC~gNiCRSpmAEai~r~~~~~~g~~~~v~SAGt~~~~G~~~dp~a~~vl~e~Gidis-hrar-~lt-~~d-- 107 (184)
T 4etn_A 33 GSMDIIFVCTGNTSRSPMAEALFKSIAEREGLNVNVRSAGVFASPNGKATPHAVEALFEKHIALN-HVSS-PLT-EEL-- 107 (184)
T ss_dssp -CEEEEEEESSSSSHHHHHHHHHHHHHHHHTCCEEEEEEETTCCTTCBCCHHHHHHHHHTTCCCC-CBCC-BCC-HHH--
T ss_pred CCCEEEEECCCchhHHHHHHHHHHHHHHhcCCcEEEEeeecCCcCCCCCCHHHHHHHHHcCCCch-hccC-cCC-HHH--
Confidence 4678887777764 434 3355443221 023343 332222222234568889999999986 3221 111 121
Q ss_pred HhcCCCEEEEEeec
Q 018502 201 LVQNTDFLVLARYM 214 (355)
Q Consensus 201 ~l~~~Dlivla~y~ 214 (355)
+.++|+|+...-.
T Consensus 108 -~~~~DlIltMd~~ 120 (184)
T 4etn_A 108 -MESADLVLAMTHQ 120 (184)
T ss_dssp -HHHCSEEEESSHH
T ss_pred -cCCCCEEEEcCcH
Confidence 2369999876443
No 181
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=30.23 E-value=54 Score=31.20 Aligned_cols=115 Identities=17% Similarity=0.193 Sum_probs=64.6
Q ss_pred chhHHHHHhhh----hcCCCC-eEEEEEEeCCCCCC--CchHHHHHHHCCCCeEEeCCCCCh-------hHHHHHHHhcC
Q 018502 139 EHCLVDFLYGW----QEGKLP-VEITCVISNHDRGP--NSHVIRFLERHGIPYHYLCAKENE-------REEELLELVQN 204 (355)
Q Consensus 139 g~~L~~ll~~~----~~~~l~-~eI~~Vis~~~~~~--~~~v~~~a~~~gIP~~~~~~~~~~-------~~~~~~~~l~~ 204 (355)
.|..|.|++.+ ..|.+. ..|+ ++-+- ..+ ..+....+...|+-+..+..+.-. ...++.+.+++
T Consensus 126 ~HPtQaLaDl~Ti~e~~g~l~glkva-~vGD~-~~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~g~~~d~~eav~~ 203 (304)
T 3r7f_A 126 QHPTQSLLDLMTIYEEFNTFKGLTVS-IHGDI-KHSRVARSNAEVLTRLGARVLFSGPSEWQDEENTFGTYVSMDEAVES 203 (304)
T ss_dssp CCHHHHHHHHHHHHHHHSCCTTCEEE-EESCC-TTCHHHHHHHHHHHHTTCEEEEESCGGGSCTTCSSCEECCHHHHHHH
T ss_pred cCcHHHHHHHHHHHHHhCCCCCCEEE-EEcCC-CCcchHHHHHHHHHHcCCEEEEECCCccCcchhhcCccCCHHHHhCC
Confidence 46666665542 125553 3443 33321 101 125667778888877665432100 01134455668
Q ss_pred CCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccc-cccCChHHHhhcCCCeEEecCCCCCCCCC
Q 018502 205 TDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYF-NMILSGKFLRSYGKDVINIHHGLLPSFKG 272 (355)
Q Consensus 205 ~Dlivla~y~~~~~~~~~~~~~~~~~~~~~~~~~~s~y~-~~il~~~~l~~~~~~~INiHpslLP~yrG 272 (355)
+|+|.+-++.+ |- ++...+.--|+ +|.+..++++..+..+|=+||. |.+||
T Consensus 204 aDvvyt~~~q~------er---------~~~~~~~~~~~~~y~v~~~~l~~a~~~ai~mHcl--P~~Rg 255 (304)
T 3r7f_A 204 SDVVMLLRIQN------ER---------HQSAVSQEGYLNKYGLTVERAERMKRHAIIMHPA--PVNRG 255 (304)
T ss_dssp CSEEEECCCCT------TT---------CCSSCCSTTHHHHHSBCHHHHTTSCTTCEEECCS--CCCBT
T ss_pred CCEEEeccchh------hc---------cccchhHHHHhCCCccCHHHHhhcCCCCEEECCC--CCCCC
Confidence 99997765432 11 10001222333 5789999999888899999995 88887
No 182
>3r8n_F 30S ribosomal protein S6; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 2ykr_F 3fih_F* 3iy8_F 3j18_F* 2wwl_F 3oar_F 3oaq_F 3ofb_F 3ofa_F 3ofp_F 3ofx_F 3ofy_F 3ofo_F 3r8o_F 4a2i_F 4gd1_F 4gd2_F 2gy9_F 2gyb_F
Probab=29.66 E-value=51 Score=25.94 Aligned_cols=55 Identities=11% Similarity=0.155 Sum_probs=37.4
Q ss_pred CCccchHHHHHHHHHhcCCeEeEeeeec---------cCCCCeEEEEEEEEeCCCCCChHHHHHHHH
Q 018502 50 PDEVGIVAKLSECIASRGGNILAADVFV---------PEKKNVFYSRSEFIFDPIKWPREQMDEDFF 107 (355)
Q Consensus 50 pDr~GIVA~VS~~La~~g~NIld~~q~i---------d~~~g~F~Mr~~v~~~~~~~~~~~L~~~l~ 107 (355)
.+...++..+.+.+.++||.|.+++.-. ....|.|+ .+.|+.+.. ..++|...|.
T Consensus 16 e~~~~~~~~~~~~i~~~gg~i~~~e~wG~r~LAY~I~k~~~G~Y~-l~~f~a~~~--~i~eler~lr 79 (100)
T 3r8n_F 16 EQVPGMIERYTAAITGAEGKIHRLEDWGRRQLAYPINKLHKAHYV-LMNVEAPQE--VIDELETTFR 79 (100)
T ss_dssp THHHHHHHHHHHHHHTTTCBCCCCEEEEEECCSSCTTSCSCEEEE-ECCEEECTT--TTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEEeeecccCCeEcCCCCEEEEE-EEEEEeChH--HHHHHHHHhc
Confidence 3456788999999999999999877643 12355555 666776643 4566666544
No 183
>1cqm_A Ribosomal protein S6; alzheimer disease, oligomerization; 1.65A {Thermus thermophilus} SCOP: d.58.14.1 PDB: 1cqn_A 1qjh_A 1ris_A 1fka_F 1gix_I* 1hnw_F* 1hnx_F* 1hnz_F* 1hr0_F 1i94_F* 1i95_F* 1i96_F* 1i97_F* 1ibk_F* 1ibl_F* 1ibm_F 1j5e_F 1jgo_I* 1jgp_I* 1jgq_I* ...
Probab=29.60 E-value=2e+02 Score=22.40 Aligned_cols=41 Identities=5% Similarity=0.058 Sum_probs=29.0
Q ss_pred ccchHHHHHHHHHhcCCeEeEeeeec---------cCCCCeEEEEEEEEeC
Q 018502 52 EVGIVAKLSECIASRGGNILAADVFV---------PEKKNVFYSRSEFIFD 93 (355)
Q Consensus 52 r~GIVA~VS~~La~~g~NIld~~q~i---------d~~~g~F~Mr~~v~~~ 93 (355)
...++..+.+.+.++||.|.+++.-. ....|.|+ .+.|+.+
T Consensus 19 ~~~~~~~~~~~i~~~gg~i~~~e~wG~R~LAY~I~k~~~G~Y~-l~~f~a~ 68 (101)
T 1cqm_A 19 LALEKEIIQRALENYGARVEKVAILGLRRLAYPIAKDPQGYFL-WYQVEMP 68 (101)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEEEEEEEEEEEETTEEEEEEE-EEEEEEC
T ss_pred HHHHHHHHHHHHHHCCCEEEEEEeecCcccccCcCCCCEEEEE-EEEEEeC
Confidence 45889999999999999999876532 11245554 6666665
No 184
>2lbw_A H/ACA ribonucleoprotein complex subunit 2; L7AE, snoRNP, scaRNP, RNA binding protein; NMR {Saccharomyces cerevisiae} PDB: 2lbx_A
Probab=29.45 E-value=56 Score=26.51 Aligned_cols=18 Identities=28% Similarity=0.683 Sum_probs=15.4
Q ss_pred hHHHHHHHCCCCeEEeCC
Q 018502 172 HVIRFLERHGIPYHYLCA 189 (355)
Q Consensus 172 ~v~~~a~~~gIP~~~~~~ 189 (355)
.+..+|+++|||+.++++
T Consensus 54 ~l~~lc~~~~VP~~~v~s 71 (121)
T 2lbw_A 54 HIPVLCEDHSVPYIFIPS 71 (121)
T ss_dssp HHHHHHHHTCCCEEECCC
T ss_pred HHHHHHHhcCCcEEEECC
Confidence 578899999999988763
No 185
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=29.20 E-value=43 Score=27.33 Aligned_cols=32 Identities=22% Similarity=0.395 Sum_probs=23.3
Q ss_pred EEEEEEeCCCCCCCchHHHHHHHCCCCeEEeC
Q 018502 157 EITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (355)
Q Consensus 157 eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~ 188 (355)
++.|+|-.....+...+.+.|+++|||+...+
T Consensus 74 ~~~~iIlt~g~~~~~~i~~~A~~~~ipvl~t~ 105 (139)
T 2ioj_A 74 NVRCLILTGNLEPVQLVLTKAEERGVPVILTG 105 (139)
T ss_dssp TEEEEEEETTCCCCHHHHHHHHHHTCCEEECS
T ss_pred CCcEEEEcCCCCCCHHHHHHHHHCCCeEEEEC
Confidence 46665444433456789999999999999865
No 186
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=29.06 E-value=89 Score=24.59 Aligned_cols=69 Identities=19% Similarity=0.275 Sum_probs=36.0
Q ss_pred CceEEEEEeCC-chhHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeCCCCChhHHHHHHHh--cC
Q 018502 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELV--QN 204 (355)
Q Consensus 128 ~~riavl~S~~-g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l--~~ 204 (355)
+++|+|++.|. |..+...|.. .| ++++.+=.+. ...+.+.+.|+++...+. .+++.++.. .+
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~--~g---~~V~~id~~~------~~~~~~~~~~~~~~~gd~----~~~~~l~~~~~~~ 70 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTA--AG---KKVLAVDKSK------EKIELLEDEGFDAVIADP----TDESFYRSLDLEG 70 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH--TT---CCEEEEESCH------HHHHHHHHTTCEEEECCT----TCHHHHHHSCCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHH--CC---CeEEEEECCH------HHHHHHHHCCCcEEECCC----CCHHHHHhCCccc
Confidence 45888887654 3444333332 23 5665443222 234555667877665442 223334333 27
Q ss_pred CCEEEEE
Q 018502 205 TDFLVLA 211 (355)
Q Consensus 205 ~Dlivla 211 (355)
+|.+|++
T Consensus 71 ~d~vi~~ 77 (141)
T 3llv_A 71 VSAVLIT 77 (141)
T ss_dssp CSEEEEC
T ss_pred CCEEEEe
Confidence 8988764
No 187
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=28.93 E-value=74 Score=25.44 Aligned_cols=68 Identities=16% Similarity=0.228 Sum_probs=38.2
Q ss_pred CceEEEEEeCCchhHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeCCCCChhHHHHHHHhcCCCE
Q 018502 128 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTDF 207 (355)
Q Consensus 128 ~~riavl~S~~g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l~~~Dl 207 (355)
.+||+|+++|. --..+...+.. .+++ +.|+ ++. .....++++++++++.... ++.+.+.++|+
T Consensus 21 ~~~v~iiG~G~--iG~~~a~~l~~--~g~~-v~v~-~r~---~~~~~~~a~~~~~~~~~~~--------~~~~~~~~~Di 83 (144)
T 3oj0_A 21 GNKILLVGNGM--LASEIAPYFSY--PQYK-VTVA-GRN---IDHVRAFAEKYEYEYVLIN--------DIDSLIKNNDV 83 (144)
T ss_dssp CCEEEEECCSH--HHHHHGGGCCT--TTCE-EEEE-ESC---HHHHHHHHHHHTCEEEECS--------CHHHHHHTCSE
T ss_pred CCEEEEECCCH--HHHHHHHHHHh--CCCE-EEEE-cCC---HHHHHHHHHHhCCceEeec--------CHHHHhcCCCE
Confidence 46899998643 22334444332 2466 4444 432 2345678888887654322 12334558999
Q ss_pred EEEEe
Q 018502 208 LVLAR 212 (355)
Q Consensus 208 ivla~ 212 (355)
++.+-
T Consensus 84 vi~at 88 (144)
T 3oj0_A 84 IITAT 88 (144)
T ss_dssp EEECS
T ss_pred EEEeC
Confidence 98764
No 188
>1p8a_A Protein tyrosine phosphatase; hydrolase; NMR {Tritrichomonas foetus} SCOP: c.44.1.1
Probab=28.77 E-value=1.2e+02 Score=24.89 Aligned_cols=84 Identities=11% Similarity=0.060 Sum_probs=48.0
Q ss_pred CCceEEEEEeCCc--hh-HHHHHhhhhcCCCCeEEEEEEeCC-CCCCCchHHHHHHHCCCCeEEeCCCCChhHHHHHHHh
Q 018502 127 PKYKVAVLASKQE--HC-LVDFLYGWQEGKLPVEITCVISNH-DRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELV 202 (355)
Q Consensus 127 ~~~riavl~S~~g--~~-L~~ll~~~~~~~l~~eI~~Vis~~-~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l 202 (355)
.++||.|+.+|+- |. .+.++.....+.+.+.-.++-..| ..+.+....+.++++||++.....+ ...+ + .+
T Consensus 3 ~~~~VLFVC~gN~cRSpmAEal~~~~~~~~~~v~SAGt~~~~~g~~~~p~a~~~l~e~Gid~s~~~sr-~l~~-~---~~ 77 (146)
T 1p8a_A 3 EKKAVLFVCLGNICRSPACEGICRDMVGDKLIIDSAATSGFHVGQSPDTRSQKVCKSNGVDISKQRAR-QITK-A---DF 77 (146)
T ss_dssp CCCCEEEESSSSCSSSTTHHHHHHHHHSSCSSCEEECSCTTSCSCSCTHHHHHHHHHHSCCCCCCCCC-CCCS-H---HH
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHHhcCCCEEEEeeecCCcccCCCCCHHHHHHHHHcCCChhcCeec-cCCH-h---Hh
Confidence 4568887776663 33 455666655554555555544423 2234557889999999998532211 1111 1 22
Q ss_pred cCCCEEEEEeecc
Q 018502 203 QNTDFLVLARYMQ 215 (355)
Q Consensus 203 ~~~Dlivla~y~~ 215 (355)
.++|+|+...-.+
T Consensus 78 ~~~DlIi~m~~~~ 90 (146)
T 1p8a_A 78 SKFDVIAALDQSI 90 (146)
T ss_dssp HSCSEEEESSHHH
T ss_pred hcCCEEEEeChHH
Confidence 3799998765433
No 189
>3luc_A Protein argonaute-2; MID domain, ribonucleoprotein, RNA-binding, RNA-mediated GEN silencing, translation regulation, RNA binding protein; 1.69A {Homo sapiens} PDB: 3lud_A* 3lug_A 3luh_A 3luj_A* 3luk_A 3qx8_A* 3qx9_A*
Probab=28.68 E-value=1.6e+02 Score=24.03 Aligned_cols=81 Identities=10% Similarity=0.053 Sum_probs=45.8
Q ss_pred hHHHHHHHHHHHhhhhhccceeeeCCCCCCceEEEEEeCCchhHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHH
Q 018502 99 REQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLE 178 (355)
Q Consensus 99 ~~~L~~~l~~la~~lg~~~~~~~~~~~~~~~riavl~S~~g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~ 178 (355)
.+.+.+.|...+..+||. +. +++.+.. .+.....++..+..++...-..+++.+|..........+..+|+
T Consensus 30 ~~~F~~~L~~~~~~~Gm~-----i~---~~p~~~~-~~~~~~~v~~~~~~l~~~~~~~qlv~~ilp~~~~~Y~~iK~~~~ 100 (138)
T 3luc_A 30 LKSFTEQLRKISRDAGMP-----IQ---GQPCFCK-YAQGADSVEPMFRHLKNTYAGLQLVVVILPGKTPVYAEVKRVGD 100 (138)
T ss_dssp HHHHHHHHHHHHHHHTCC-----BC---SSCSEEE-ECCSGGGHHHHHHHHHHHCTTCCEEEEEECSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCC-----CC---CCCeeee-cCCcHHHHHHHHHHHHhcCCCCcEEEEEECCCChHHHHHHHHhc
Confidence 567888888889999973 21 1122222 23333456666665543211346666666532111235667764
Q ss_pred -HCCCCeEEeC
Q 018502 179 -RHGIPYHYLC 188 (355)
Q Consensus 179 -~~gIP~~~~~ 188 (355)
++|||...+-
T Consensus 101 ~~~gv~tqcv~ 111 (138)
T 3luc_A 101 TVLGMATQCVQ 111 (138)
T ss_dssp TTSCCCEEEEE
T ss_pred cCCCcceEEeC
Confidence 7899998764
No 190
>1rlg_A 50S ribosomal protein L7AE; protein-RNA, structural protein/RNA complex; HET: 5BU; 2.70A {Archaeoglobus fulgidus} SCOP: d.79.3.1
Probab=28.45 E-value=91 Score=25.02 Aligned_cols=52 Identities=19% Similarity=0.300 Sum_probs=29.8
Q ss_pred HHhhhhcCCCCeEEEEEEeCCCCCC-CchHHHHHHHCCCCeEEeCCCCChhHHHHHHHhc
Q 018502 145 FLYGWQEGKLPVEITCVISNHDRGP-NSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 203 (355)
Q Consensus 145 ll~~~~~~~l~~eI~~Vis~~~~~~-~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l~ 203 (355)
.+..++.|+ +..+.+-++-+... -..+..+|+++|||+.++.++ +++=+++-
T Consensus 35 v~kal~~gk--a~lViiA~D~~~~~~~~~l~~lc~~~~Vp~~~~~sk-----~eLG~a~G 87 (119)
T 1rlg_A 35 TTKAVERGL--AKLVYIAEDVDPPEIVAHLPLLCEEKNVPYIYVKSK-----NDLGRAVG 87 (119)
T ss_dssp HHHHHTTTC--CSEEEEESCCSCSTTTTHHHHHHHHHTCCEEEESCH-----HHHHHHTT
T ss_pred HHHHHHcCC--CcEEEEeCCCChHHHHHHHHHHHHHcCCCEEEeCCH-----HHHHHHhC
Confidence 344445563 45543333332211 357889999999999887632 34555553
No 191
>3p52_A NH(3)-dependent NAD(+) synthetase; structural genomics, center for structural genomics of infec diseases, NADE, CSGI; 2.74A {Campylobacter jejuni} SCOP: c.26.2.0
Probab=28.39 E-value=1.3e+02 Score=27.27 Aligned_cols=57 Identities=9% Similarity=0.072 Sum_probs=37.0
Q ss_pred CceEEEEEeCC-chhH-HHHHhhhhcCCCCeEEEEEEeCCCCCCC---chHHHHHHHCCCCeEEeC
Q 018502 128 KYKVAVLASKQ-EHCL-VDFLYGWQEGKLPVEITCVISNHDRGPN---SHVIRFLERHGIPYHYLC 188 (355)
Q Consensus 128 ~~riavl~S~~-g~~L-~~ll~~~~~~~l~~eI~~Vis~~~~~~~---~~v~~~a~~~gIP~~~~~ 188 (355)
..||+|..||. .|.+ ..++... -| .++.+|..++...+. ..+.++|++.|||++.++
T Consensus 26 ~~~vvv~lSGGiDSsv~a~l~~~~-~g---~~v~av~~~~~~~~~~~~~~a~~~a~~lgi~~~~v~ 87 (249)
T 3p52_A 26 SQGVVLGLSGGIDSALVATLCKRA-LK---ENVFALLMPTQISNKANLEDALRLCADLNLEYKIIE 87 (249)
T ss_dssp CSEEEEECCSSHHHHHHHHHHHHH-HT---TSEEEEECCSCCSSCHHHHHHHHHHHHHTCEEEECC
T ss_pred CCCEEEEcCCCHHHHHHHHHHHHH-cC---CcEEEEEecCCCCCHHHHHHHHHHHHHhCCCEEEEE
Confidence 46899999986 3443 3344332 13 567777776632222 357889999999998876
No 192
>2cwd_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, structural genomics; 1.90A {Thermus thermophilus}
Probab=27.89 E-value=2.1e+02 Score=23.89 Aligned_cols=82 Identities=15% Similarity=0.134 Sum_probs=44.5
Q ss_pred CCceEEEEEeCCc--hhH-HHHHhhhhc--C---CCCeEEEEEEeCC-CCCCCchHHHHHHHCCCCeEEeCCCCChhHHH
Q 018502 127 PKYKVAVLASKQE--HCL-VDFLYGWQE--G---KLPVEITCVISNH-DRGPNSHVIRFLERHGIPYHYLCAKENEREEE 197 (355)
Q Consensus 127 ~~~riavl~S~~g--~~L-~~ll~~~~~--~---~l~~eI~~Vis~~-~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~ 197 (355)
+++||.|+.+|+- |.+ +.++..... | .+.+.-.++-..| ..+.+....+.++++||++. ...+ ...+ +
T Consensus 3 ~~~~VLFVC~gN~cRSpmAEal~~~~~~~~gl~~~~~v~SAGt~~~~~g~~~~p~a~~~l~e~Gid~s-~~ar-~l~~-~ 79 (161)
T 2cwd_A 3 RPVRVLFVCLGNICRSPMAEGIFRKLLKERGLEDRFEVDSAGTGAWHVGEPMDPRARRVLEEEGAYFP-HVAR-RLTR-E 79 (161)
T ss_dssp CCEEEEEEESSSSSHHHHHHHHHHHHHHHHTCTTTEEEEEEESSCTTTTCCCCHHHHHHHHHHTCCCC-CCCC-BCCH-H
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHHHHHHcCCCCcEEEEecccCCCccCCCCCHHHHHHHHHcCcCcc-cccc-CCCH-h
Confidence 5679888877774 433 335554332 2 2223333333312 22345578899999999986 3322 1111 1
Q ss_pred HHHHhcCCCEEEEEeec
Q 018502 198 LLELVQNTDFLVLARYM 214 (355)
Q Consensus 198 ~~~~l~~~Dlivla~y~ 214 (355)
.+.++|+|+...-.
T Consensus 80 ---~~~~~DlIi~M~~~ 93 (161)
T 2cwd_A 80 ---DVLAYDHILVMDRE 93 (161)
T ss_dssp ---HHHHCSEEEESSHH
T ss_pred ---HhccCCEEEECChH
Confidence 22369999876543
No 193
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=27.53 E-value=45 Score=28.74 Aligned_cols=70 Identities=13% Similarity=0.146 Sum_probs=34.2
Q ss_pred ceEEEEEeCC-chhHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeCCCCChhHHHHHHH-hcCCC
Q 018502 129 YKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLEL-VQNTD 206 (355)
Q Consensus 129 ~riavl~S~~-g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~-l~~~D 206 (355)
+||+|++.|. |..+...|.. .| ++++.+=.+. ..+.+++++.|+++...+. ...+.+.+. +.++|
T Consensus 1 M~iiIiG~G~~G~~la~~L~~--~g---~~v~vid~~~-----~~~~~l~~~~~~~~i~gd~---~~~~~l~~a~i~~ad 67 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLS--RK---YGVVIINKDR-----ELCEEFAKKLKATIIHGDG---SHKEILRDAEVSKND 67 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHH--TT---CCEEEEESCH-----HHHHHHHHHSSSEEEESCT---TSHHHHHHHTCCTTC
T ss_pred CEEEEECCCHHHHHHHHHHHh--CC---CeEEEEECCH-----HHHHHHHHHcCCeEEEcCC---CCHHHHHhcCcccCC
Confidence 4788887544 3444433332 23 5666443222 2345556667887765432 112222222 23677
Q ss_pred EEEEE
Q 018502 207 FLVLA 211 (355)
Q Consensus 207 livla 211 (355)
.++++
T Consensus 68 ~vi~~ 72 (218)
T 3l4b_C 68 VVVIL 72 (218)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 77654
No 194
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=27.21 E-value=1.5e+02 Score=26.56 Aligned_cols=77 Identities=12% Similarity=0.173 Sum_probs=42.4
Q ss_pred ceEEEEEeCCc-hh--HHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeCCCC--C-h---------
Q 018502 129 YKVAVLASKQE-HC--LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKE--N-E--------- 193 (355)
Q Consensus 129 ~riavl~S~~g-~~--L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~--~-~--------- 193 (355)
+||+++..+.| +. ...|...+... .++|..+ +.... ...+...+.|++++.++... . .
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L~~~--G~~V~v~-~~~~~----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 79 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHLMAQ--GWQVRWL-GTADR----MEADLVPKHGIEIDFIRISGLRGKGIKALIAAPL 79 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTT--TCEEEEE-ECTTS----THHHHGGGGTCEEEECCCCCCTTCCHHHHHTCHH
T ss_pred cEEEEEeCCCccchhHHHHHHHHHHHc--CCEEEEE-ecCCc----chhhhccccCCceEEecCCccCcCccHHHHHHHH
Confidence 79998876654 32 23555555432 4788754 44321 12344566799887765210 0 0
Q ss_pred ----hHHHHHHHhc--CCCEEEEEe
Q 018502 194 ----REEELLELVQ--NTDFLVLAR 212 (355)
Q Consensus 194 ----~~~~~~~~l~--~~Dlivla~ 212 (355)
.-..+.++++ ++|++++.+
T Consensus 80 ~~~~~~~~l~~~l~~~~pDvv~~~~ 104 (364)
T 1f0k_A 80 RIFNAWRQARAIMKAYKPDVVLGMG 104 (364)
T ss_dssp HHHHHHHHHHHHHHHHCCSEEEECS
T ss_pred HHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 0123445554 899998754
No 195
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=27.19 E-value=1.5e+02 Score=29.21 Aligned_cols=102 Identities=11% Similarity=0.149 Sum_probs=56.0
Q ss_pred CCceEEEEEeCC-chhHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeCCC---------------
Q 018502 127 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAK--------------- 190 (355)
Q Consensus 127 ~~~riavl~S~~-g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~--------------- 190 (355)
+..||+|++.|. |.....++.+ +.++|. +.+... .-.+.+++.|.++..++..
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~-----lGa~V~--v~D~~~----~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~ 257 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARR-----LGAVVS--ATDVRP----AAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEM 257 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH-----TTCEEE--EECSST----THHHHHHHTTCEECCCCC----------------
T ss_pred CCCEEEEECCcHHHHHHHHHHHH-----CCCEEE--EEcCCH----HHHHHHHHcCCceeecccccccccccccchhhhc
Confidence 357899988765 4444445543 246654 334321 2456777788765432100
Q ss_pred CCh----hHHHHHHHhcCCCEEEEEee--ccccchhhHhhhhhhhhhhhcccCcccccccccCChHHHhhcCCCeEEecC
Q 018502 191 ENE----REEELLELVQNTDFLVLARY--MQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHH 264 (355)
Q Consensus 191 ~~~----~~~~~~~~l~~~Dlivla~y--~~~~~~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~~l~~~~~~~INiHp 264 (355)
.+. ..+.+.+.+.++|+++.+-. ..+- +.++.++.++..+.+.+=+=-
T Consensus 258 s~~~~~~~~~~l~e~l~~aDVVI~tvlipg~~a--------------------------p~Lvt~emv~~Mk~GsVIVDv 311 (405)
T 4dio_A 258 SGEYQVKQAALVAEHIAKQDIVITTALIPGRPA--------------------------PRLVTREMLDSMKPGSVVVDL 311 (405)
T ss_dssp -CHHHHHHHHHHHHHHHTCSEEEECCCCSSSCC--------------------------CCCBCHHHHTTSCTTCEEEET
T ss_pred chhhhhhhHhHHHHHhcCCCEEEECCcCCCCCC--------------------------CEEecHHHHhcCCCCCEEEEE
Confidence 000 12345666679999987532 1111 126788999888766655544
Q ss_pred C
Q 018502 265 G 265 (355)
Q Consensus 265 s 265 (355)
|
T Consensus 312 A 312 (405)
T 4dio_A 312 A 312 (405)
T ss_dssp T
T ss_pred e
Confidence 4
No 196
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A*
Probab=27.12 E-value=1.7e+02 Score=23.47 Aligned_cols=88 Identities=9% Similarity=0.153 Sum_probs=46.3
Q ss_pred CceEEEEEeC-CchhHHHHHhhhh-cCCCCeEEEE--EEeCCCCCCC----------chHHHHHHHCCCCeEEeC-CCCC
Q 018502 128 KYKVAVLASK-QEHCLVDFLYGWQ-EGKLPVEITC--VISNHDRGPN----------SHVIRFLERHGIPYHYLC-AKEN 192 (355)
Q Consensus 128 ~~riavl~S~-~g~~L~~ll~~~~-~~~l~~eI~~--Vis~~~~~~~----------~~v~~~a~~~gIP~~~~~-~~~~ 192 (355)
.+||.|-+.+ +.....++-.+.. ....++++.. |+...+.... ....+.+++.|+++.... ....
T Consensus 24 ~~~ILv~vD~~s~~s~~al~~A~~la~~~~a~l~llhV~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~v~~G 103 (155)
T 3dlo_A 24 YMPIVVAVDKKSDRAERVLRFAAEEARLRGVPVYVVHSLPGGGRTKDEDIIEAKETLSWAVSIIRKEGAEGEEHLLVRGK 103 (155)
T ss_dssp CCCEEEECCSSSHHHHHHHHHHHHHHHHHTCCEEEEEEECCSTTSCHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEESSS
T ss_pred cCeEEEEECCCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcCCCcccHHHHHHHHHHHHHHHHHHHhcCCCceEEEEecCC
Confidence 3588888877 6554444332211 0111244444 4432211000 123456677898875421 1122
Q ss_pred hhHHHHHHHhc--CCCEEEEEeecc
Q 018502 193 EREEELLELVQ--NTDFLVLARYMQ 215 (355)
Q Consensus 193 ~~~~~~~~~l~--~~Dlivla~y~~ 215 (355)
...+++.+..+ ++|++|+....+
T Consensus 104 ~~~~~I~~~a~~~~~DLIV~G~~g~ 128 (155)
T 3dlo_A 104 EPPDDIVDFADEVDAIAIVIGIRKR 128 (155)
T ss_dssp CHHHHHHHHHHHTTCSEEEEECCEE
T ss_pred CHHHHHHHHHHHcCCCEEEECCCCC
Confidence 34567877776 899999987765
No 197
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=27.09 E-value=44 Score=27.16 Aligned_cols=76 Identities=12% Similarity=0.065 Sum_probs=36.1
Q ss_pred CCCCCCceEEEEEeCC-chhHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHH-HCCCCeEEeCCCCChhHHHHHH
Q 018502 123 PDIDPKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLE-RHGIPYHYLCAKENEREEELLE 200 (355)
Q Consensus 123 ~~~~~~~riavl~S~~-g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~-~~gIP~~~~~~~~~~~~~~~~~ 200 (355)
+...+.++|+|++.|. |..+...|.. .| .+|+.+-.+.+ -.+.+. +.|+.+...+. . ..+.+.+
T Consensus 14 ~~~~~~~~v~IiG~G~iG~~la~~L~~--~g---~~V~vid~~~~------~~~~~~~~~g~~~~~~d~-~--~~~~l~~ 79 (155)
T 2g1u_A 14 SKKQKSKYIVIFGCGRLGSLIANLASS--SG---HSVVVVDKNEY------AFHRLNSEFSGFTVVGDA-A--EFETLKE 79 (155)
T ss_dssp ---CCCCEEEEECCSHHHHHHHHHHHH--TT---CEEEEEESCGG------GGGGSCTTCCSEEEESCT-T--SHHHHHT
T ss_pred hcccCCCcEEEECCCHHHHHHHHHHHh--CC---CeEEEEECCHH------HHHHHHhcCCCcEEEecC-C--CHHHHHH
Confidence 3445668999997655 3444444432 23 56664433221 122333 55665543221 1 1222333
Q ss_pred H-hcCCCEEEEEe
Q 018502 201 L-VQNTDFLVLAR 212 (355)
Q Consensus 201 ~-l~~~Dlivla~ 212 (355)
. +.++|+++.+-
T Consensus 80 ~~~~~ad~Vi~~~ 92 (155)
T 2g1u_A 80 CGMEKADMVFAFT 92 (155)
T ss_dssp TTGGGCSEEEECS
T ss_pred cCcccCCEEEEEe
Confidence 2 34799988763
No 198
>2ale_A SNU13, NHP2/L7AE family protein YEL026W; splicing, RNA, yeast, His-TAG, RNA binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: d.79.3.1 PDB: 1zwz_A 2ozb_A 3siu_A 3siv_A 1e7k_A
Probab=26.99 E-value=77 Score=26.38 Aligned_cols=43 Identities=14% Similarity=0.169 Sum_probs=25.2
Q ss_pred HHhhhhcCCCCeEEEEEEeCCCCC-CCchHHHHHHHCCCCeEEeCC
Q 018502 145 FLYGWQEGKLPVEITCVISNHDRG-PNSHVIRFLERHGIPYHYLCA 189 (355)
Q Consensus 145 ll~~~~~~~l~~eI~~Vis~~~~~-~~~~v~~~a~~~gIP~~~~~~ 189 (355)
.+..++.|+ +..+.+-.+-+.. --..+..+|+++|||++++++
T Consensus 40 v~kai~~gk--akLViiA~D~~p~~~~~~l~~lc~~~~VP~~~v~s 83 (134)
T 2ale_A 40 ATKTLNRGI--SEFIIMAADCEPIEILLHLPLLCEDKNVPYVFVPS 83 (134)
T ss_dssp HHHHHHHTC--EEEEEEETTCSSGGGGTHHHHHHHHHTCCEEEESC
T ss_pred HHHHHHhCC--CeEEEEeCCCCHHHHHHHHHHHHHhcCCCEEEECC
Confidence 344444563 5555333332211 124678999999999998863
No 199
>3bbn_F Ribosomal protein S6; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=26.46 E-value=2.6e+02 Score=24.42 Aligned_cols=64 Identities=11% Similarity=0.159 Sum_probs=42.4
Q ss_pred ccE-EEEEEcCC-----ccchHHHHHHHHHhcCCeEeEeeeec--------cCC----------CCeEEEEEEEEeCCCC
Q 018502 41 THG-IHVFHCPD-----EVGIVAKLSECIASRGGNILAADVFV--------PEK----------KNVFYSRSEFIFDPIK 96 (355)
Q Consensus 41 ~~~-ILTV~GpD-----r~GIVA~VS~~La~~g~NIld~~q~i--------d~~----------~g~F~Mr~~v~~~~~~ 96 (355)
.+| ++.+.=|| ...+|..+.+.|.++|+.|.+++.-. ... .|.|+ .|.|+.+..
T Consensus 63 r~YE~m~IlrPdl~eeev~alver~~~iI~~~GG~I~~ve~WG~RrLAY~IkK~~kgg~~~~h~eG~Yv-lm~F~a~p~- 140 (168)
T 3bbn_F 63 RQYETMAVLRPDMTEDERLTLTQKYEELLVAGGAMYVEVFNRGVIPLAYSIKRKNKAGETNNYLDGIYL-LFTYFTKPE- 140 (168)
T ss_dssp EEEEEEEEECTTSCHHHHHSTTHHHHHHHTTTSCEEEEEEEEEECCCSSCTTSCSSSCSSCCCCCCEEE-EEEEEECTT-
T ss_pred CceeEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEecccccccceeccCcccccccccceEEEE-EEEEEeCHH-
Confidence 344 55555666 34899999999999999999977532 111 36655 666776643
Q ss_pred CChHHHHHHHH
Q 018502 97 WPREQMDEDFF 107 (355)
Q Consensus 97 ~~~~~L~~~l~ 107 (355)
..++|+..|.
T Consensus 141 -~I~ELeR~Lr 150 (168)
T 3bbn_F 141 -SISPLEAALV 150 (168)
T ss_dssp -SSHHHHHHHH
T ss_pred -HHHHHHHHhc
Confidence 4566666554
No 200
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=26.08 E-value=68 Score=30.17 Aligned_cols=73 Identities=11% Similarity=0.059 Sum_probs=37.7
Q ss_pred CCCceEEEEE-eCCc-h--hH----HHHHhhh--h-cCCCC--eEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeCCCCC
Q 018502 126 DPKYKVAVLA-SKQE-H--CL----VDFLYGW--Q-EGKLP--VEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKEN 192 (355)
Q Consensus 126 ~~~~riavl~-S~~g-~--~L----~~ll~~~--~-~~~l~--~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~ 192 (355)
.++.||++++ .|.. . .+ ..+...- . .+... .++ +|+ +++ .....++|+++|+|-.+ .
T Consensus 4 ~~~irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~-av~-~~~---~~~a~~~a~~~~~~~~~-~---- 73 (383)
T 3oqb_A 4 TQRLGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDP-ILV-GRS---AEKVEALAKRFNIARWT-T---- 73 (383)
T ss_dssp CEEEEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEE-EEE-CSS---SHHHHHHHHHTTCCCEE-S----
T ss_pred CceeEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceee-EEE-cCC---HHHHHHHHHHhCCCccc-C----
Confidence 3568999998 7762 2 22 3333220 0 00111 233 344 442 23567889999998433 1
Q ss_pred hhHHHHHHHhc--CCCEEEEEe
Q 018502 193 EREEELLELVQ--NTDFLVLAR 212 (355)
Q Consensus 193 ~~~~~~~~~l~--~~Dlivla~ 212 (355)
.+.+++. ++|+++++.
T Consensus 74 ----~~~~ll~~~~iD~V~i~t 91 (383)
T 3oqb_A 74 ----DLDAALADKNDTMFFDAA 91 (383)
T ss_dssp ----CHHHHHHCSSCCEEEECS
T ss_pred ----CHHHHhcCCCCCEEEECC
Confidence 1233443 578777664
No 201
>1sur_A PAPS reductase; assimilatory sulfate reduction, 3-phospho-adenylyl-sulfate reductase, oxidoreductase; 2.00A {Escherichia coli} SCOP: c.26.2.2
Probab=26.05 E-value=61 Score=28.08 Aligned_cols=55 Identities=4% Similarity=-0.014 Sum_probs=35.0
Q ss_pred ceEEEEEeCCc--hhHHHHHhhhhcCCCCeEEEEEEeCCCCCC---CchHHHHHHHCCCCeEEeC
Q 018502 129 YKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGP---NSHVIRFLERHGIPYHYLC 188 (355)
Q Consensus 129 ~riavl~S~~g--~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~---~~~v~~~a~~~gIP~~~~~ 188 (355)
.||+|-.||.- ..|-.++.... .++.+|..++.-.. ...+.++|+++|||++.+.
T Consensus 45 ~~v~Va~SGGkDS~vLL~ll~~~~-----~~v~~v~vd~g~~~~e~~~~v~~~~~~~gi~~~v~~ 104 (215)
T 1sur_A 45 GEYVLSSSFGIQAAVSLHLVNQIR-----PDIPVILTDTGYLFPETYRFIDELTDKLKLNLKVYR 104 (215)
T ss_dssp SEEEEECCCCTTHHHHHHHHHHHS-----TTCEEEEEECSCBCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEecCCHHHHHHHHHHHHhC-----CCCeEEEeeCCCCCHHHHHHHHHHHHHhCCcEEEEe
Confidence 38888888753 34555555432 24556666663221 1357889999999998875
No 202
>1xbi_A 50S ribosomal protein L7AE; alpha-beta-alpha sandwich fold, RNA binding protein/structural protein complex; HET: EPE; 1.45A {Methanocaldococcus jannaschii} SCOP: d.79.3.1 PDB: 1ra4_A* 1sds_A 3paf_A
Probab=25.79 E-value=78 Score=25.61 Aligned_cols=59 Identities=17% Similarity=0.330 Sum_probs=32.3
Q ss_pred EEeCCchhHHHHHhhhhcCCCCeEEEEEEeCCCCCC-CchHHHHHHHCCCCeEEeCCCCChhHHHHHHHhc
Q 018502 134 LASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGP-NSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 203 (355)
Q Consensus 134 l~S~~g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~-~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l~ 203 (355)
+++|...+.. .++.|+ +.++.+-.+-+... -..+..+|++++||+.++.++ +++=+++-
T Consensus 30 l~~G~~~v~k----ai~~gk--a~lViiA~D~~p~~~~~~l~~lc~~~~VP~~~v~sk-----~eLG~a~G 89 (120)
T 1xbi_A 30 IKKGANEVTK----AVERGI--AKLVIIAEDVKPEEVVAHLPYLCEEKGIPYAYVASK-----QDLGKAAG 89 (120)
T ss_dssp EEESHHHHHH----HHHHTC--CSEEEEESCCSSGGGTTTHHHHHHHHTCCEEEESCH-----HHHHHHTT
T ss_pred ccccHHHHHH----HHHcCC--ceEEEEcCCCChHHHHHHHHHHHHhcCCCEEEeCCH-----HHHHHHhC
Confidence 4445444444 344453 45543333322111 356889999999999887632 34555553
No 203
>2h9z_A Hypothetical protein HP0495; feredoxin-like (beta-alpha-beta-BETA-alpha-beta), structural genomics, unknown function; NMR {Helicobacter pylori} SCOP: d.58.54.2 PDB: 2joq_A
Probab=25.50 E-value=78 Score=24.32 Aligned_cols=63 Identities=16% Similarity=0.088 Sum_probs=43.9
Q ss_pred cEEEEEEcCCccc-hHHHHHHHHHhcCCeEeEeeeeccCCCCeEE-EEEEEEeCCCCCChHHHHHHHHHHHhh
Q 018502 42 HGIHVFHCPDEVG-IVAKLSECIASRGGNILAADVFVPEKKNVFY-SRSEFIFDPIKWPREQMDEDFFKLSKM 112 (355)
Q Consensus 42 ~~ILTV~GpDr~G-IVA~VS~~La~~g~NIld~~q~id~~~g~F~-Mr~~v~~~~~~~~~~~L~~~l~~la~~ 112 (355)
.+-+.|+|++.++ +.++|-..+ +.++.+ +... ...+|.|. ..+.+.+. +.+++.+-.++|++-
T Consensus 15 ~~~~Kvig~~~~~~~~~~V~~v~-~~~~~~-~~~r--~Ss~GkY~Svtv~i~a~----s~eq~~~iY~~L~~~ 79 (86)
T 2h9z_A 15 LWDYRVIMTTKDTSTLKELLETY-QRPFKL-EFKN--TSKNAKFYSFNVSMEVS----NESERNEIFQKISQL 79 (86)
T ss_dssp EEEEEEEECCSCTHHHHHHSTTC-CSSEEC-CBSC--SSCCSSCEEEEEEEECC----SHHHHHHHHHHHTCS
T ss_pred CceEEEEEECCcHHHHHHHHHHH-hccCCC-cccc--cCCCCeEEEEEEEEEEC----CHHHHHHHHHHHhcC
Confidence 5788999999999 999999988 555543 3212 24478877 44445444 578888888877643
No 204
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=25.42 E-value=2.6e+02 Score=23.73 Aligned_cols=73 Identities=8% Similarity=0.100 Sum_probs=41.0
Q ss_pred hHHHHHHHHHHHhhhhhccceeeeCCCCCCceEEEEEeCCch-hHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHH
Q 018502 99 REQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEH-CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFL 177 (355)
Q Consensus 99 ~~~L~~~l~~la~~lg~~~~~~~~~~~~~~~riavl~S~~g~-~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a 177 (355)
..++.+.+++.+++.|. ++.++.+.... ....+++.+.....+ +||............+.+
T Consensus 17 ~~~~~~gi~~~a~~~g~--------------~~~~~~~~~~~~~~~~~~~~l~~~~vd----giIi~~~~~~~~~~~~~~ 78 (272)
T 3o74_A 17 YARIAKQLEQGARARGY--------------QLLIASSDDQPDSERQLQQLFRARRCD----ALFVASCLPPEDDSYREL 78 (272)
T ss_dssp HHHHHHHHHHHHHHTTC--------------EEEEEECTTCHHHHHHHHHHHHHTTCS----EEEECCCCCSSCCHHHHH
T ss_pred HHHHHHHHHHHHHHCCC--------------EEEEEeCCCCHHHHHHHHHHHHHcCCC----EEEEecCccccHHHHHHH
Confidence 46777778877777764 44445544332 223344444334322 233322221234577888
Q ss_pred HHCCCCeEEeCC
Q 018502 178 ERHGIPYHYLCA 189 (355)
Q Consensus 178 ~~~gIP~~~~~~ 189 (355)
.+.|||+..++.
T Consensus 79 ~~~~iPvV~~~~ 90 (272)
T 3o74_A 79 QDKGLPVIAIDR 90 (272)
T ss_dssp HHTTCCEEEESS
T ss_pred HHcCCCEEEEcc
Confidence 899999988874
No 205
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=25.38 E-value=68 Score=26.62 Aligned_cols=70 Identities=13% Similarity=0.022 Sum_probs=37.0
Q ss_pred CceEEEEEeCC-chhHHHHHhhhhc-CCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeCCCCChhHHHHHHH--hc
Q 018502 128 KYKVAVLASKQ-EHCLVDFLYGWQE-GKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLEL--VQ 203 (355)
Q Consensus 128 ~~riavl~S~~-g~~L~~ll~~~~~-~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~--l~ 203 (355)
..+|+|++.|. |..+...|.. . | ++++++-.+. .-.+.+.+.|+.+...+. ...+.+.+. +.
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~--~~g---~~V~vid~~~------~~~~~~~~~g~~~~~gd~---~~~~~l~~~~~~~ 104 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRA--RYG---KISLGIEIRE------EAAQQHRSEGRNVISGDA---TDPDFWERILDTG 104 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHH--HHC---SCEEEEESCH------HHHHHHHHTTCCEEECCT---TCHHHHHTBCSCC
T ss_pred CCcEEEECCCHHHHHHHHHHHh--ccC---CeEEEEECCH------HHHHHHHHCCCCEEEcCC---CCHHHHHhccCCC
Confidence 56899987654 4444444432 2 3 4555432222 234456678888765432 112223333 34
Q ss_pred CCCEEEEE
Q 018502 204 NTDFLVLA 211 (355)
Q Consensus 204 ~~Dlivla 211 (355)
++|++|++
T Consensus 105 ~ad~vi~~ 112 (183)
T 3c85_A 105 HVKLVLLA 112 (183)
T ss_dssp CCCEEEEC
T ss_pred CCCEEEEe
Confidence 79998864
No 206
>2y1e_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase, DOXP/MEP pathway; 1.65A {Mycobacterium tuberculosis} PDB: 2jcv_A* 2jcz_A* 2jd2_A 2jd1_A 2y1d_A* 2y1c_A 2y1f_A* 2y1g_A* 3ras_A* 4a03_A* 4aic_A* 2jcx_A* 2jcy_A 2jd0_A* 2c82_A
Probab=25.13 E-value=98 Score=30.72 Aligned_cols=80 Identities=15% Similarity=0.194 Sum_probs=49.0
Q ss_pred CCCceEEEEEeCC--chhHHHHHhhhhcCCCCeEEEEEEe-CCCCCCCchHHHHHHHCCCCeEEeCCCCCh---------
Q 018502 126 DPKYKVAVLASKQ--EHCLVDFLYGWQEGKLPVEITCVIS-NHDRGPNSHVIRFLERHGIPYHYLCAKENE--------- 193 (355)
Q Consensus 126 ~~~~riavl~S~~--g~~L~~ll~~~~~~~l~~eI~~Vis-~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~--------- 193 (355)
+.++||+||+|-. |..--+++.+. .-..+|+++.. ++. -.-+.+.|++++-.+..+......
T Consensus 19 ~~mk~i~ILGSTGSIGtqtLdVi~~~---pd~f~V~aLaa~g~n---v~~L~~q~~~f~p~~v~v~d~~~~~~~~~~v~~ 92 (398)
T 2y1e_A 19 DGRLRVVVLGSTGSIGTQALQVIADN---PDRFEVVGLAAGGAH---LDTLLRQRAQTGVTNIAVADEHAAQRVGDIPYH 92 (398)
T ss_dssp -CCEEEEEESTTSHHHHHHHHHHHHC---TTTEEEEEEEECSSC---HHHHHHHHHHHCCCCEEESCHHHHHHHCCCSEE
T ss_pred CCceEEEEEccCcHHHHHHHHHHHhC---CCceEEEEEEecCCC---HHHHHHHHHHcCCCEEEEcCHHHhhhcCCEEEe
Confidence 3468899999754 33444555542 22489998887 541 235788899999888776532100
Q ss_pred hHHHHHHHhc--CCCEEEEE
Q 018502 194 REEELLELVQ--NTDFLVLA 211 (355)
Q Consensus 194 ~~~~~~~~l~--~~Dlivla 211 (355)
-++.+.++.. ++|+++.|
T Consensus 93 G~~~l~~~a~~~~~D~Vv~A 112 (398)
T 2y1e_A 93 GSDAATRLVEQTEADVVLNA 112 (398)
T ss_dssp STTHHHHHHHHSCCSEEEEC
T ss_pred cHHHHHHHhcCCCCCEEEEe
Confidence 0234555554 68999865
No 207
>2fc3_A 50S ribosomal protein L7AE; alpha-beta-alpha sandwich, ribosome, RNA binding protein; 1.56A {Aeropyrum pernix} SCOP: d.79.3.1 PDB: 3pla_C* 3id5_C* 3hax_D* 2hvy_D* 3hay_D* 3nvi_B 3nmu_C 3nvk_E* 3lwr_C 3lwo_C* 3lwq_C* 3lwp_C 3lwv_C 3hjw_C* 2czw_A 1pxw_A
Probab=25.00 E-value=99 Score=25.05 Aligned_cols=52 Identities=19% Similarity=0.263 Sum_probs=29.1
Q ss_pred HHhhhhcCCCCeEEEEEEeCCCCCC-CchHHHHHHHCCCCeEEeCCCCChhHHHHHHHhc
Q 018502 145 FLYGWQEGKLPVEITCVISNHDRGP-NSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 203 (355)
Q Consensus 145 ll~~~~~~~l~~eI~~Vis~~~~~~-~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l~ 203 (355)
.+..++.|+ +.++.+-++-+... -..+..+|++++||+.++.++ +++=+.+-
T Consensus 36 v~kal~~gk--a~lViiA~D~~~~~~~~~l~~lc~~~~Vp~~~v~sk-----~eLG~a~G 88 (124)
T 2fc3_A 36 TTKAVERGL--AKLVVIAEDVDPPEIVMHLPLLCDEKKIPYVYVPSK-----KRLGEAAG 88 (124)
T ss_dssp HHHHHHTTC--CSEEEEETTCSSGGGTTTHHHHHHHTTCCEEEESCH-----HHHHHHTT
T ss_pred HHHHHHcCC--ceEEEEcCCCChHHHHHHHHHHHHHcCCCEEEECCH-----HHHHHHhC
Confidence 344444563 44543333322111 356889999999999887632 34555553
No 208
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=25.00 E-value=3.4e+02 Score=25.23 Aligned_cols=51 Identities=12% Similarity=0.042 Sum_probs=31.7
Q ss_pred ceEEEEEeCC-ch--hHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeC
Q 018502 129 YKVAVLASKQ-EH--CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (355)
Q Consensus 129 ~riavl~S~~-g~--~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~ 188 (355)
+||+++..+. || .+..|...++.. .++|.. ++.. ...+..++.|++++.++
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~--Gh~V~v-~~~~------~~~~~v~~~g~~~~~l~ 54 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLREL--GADARM-CLPP------DYVERCAEVGVPMVPVG 54 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHT--TCCEEE-EECG------GGHHHHHHTTCCEEECS
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHC--CCeEEE-EeCH------HHHHHHHHcCCceeecC
Confidence 5888887665 44 233455554432 377765 4432 25678889999998876
No 209
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=24.96 E-value=2.2e+02 Score=24.95 Aligned_cols=72 Identities=8% Similarity=0.092 Sum_probs=39.8
Q ss_pred hHHHHHHHHHHHhhhhhccceeeeCCCCCCceEEEEEeCCchhHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHH
Q 018502 99 REQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLE 178 (355)
Q Consensus 99 ~~~L~~~l~~la~~lg~~~~~~~~~~~~~~~riavl~S~~g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~ 178 (355)
..++.+.+++.+++.|. ++.++.+........+++.+.... +-+||...... .....+.+.
T Consensus 25 ~~~~~~gi~~~a~~~g~--------------~~~~~~~~~~~~~~~~~~~l~~~~----vdGiIi~~~~~-~~~~~~~l~ 85 (294)
T 3qk7_A 25 FLEMISWIGIELGKRGL--------------DLLLIPDEPGEKYQSLIHLVETRR----VDALIVAHTQP-EDFRLQYLQ 85 (294)
T ss_dssp HHHHHHHHHHHHHHTTC--------------EEEEEEECTTCCCHHHHHHHHHTC----CSEEEECSCCS-SCHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCC--------------EEEEEeCCChhhHHHHHHHHHcCC----CCEEEEeCCCC-ChHHHHHHH
Confidence 46777778877777764 444444443222223333333332 22333332211 236778889
Q ss_pred HCCCCeEEeCC
Q 018502 179 RHGIPYHYLCA 189 (355)
Q Consensus 179 ~~gIP~~~~~~ 189 (355)
+.|||+..++.
T Consensus 86 ~~~iPvV~~~~ 96 (294)
T 3qk7_A 86 KQNFPFLALGR 96 (294)
T ss_dssp HTTCCEEEESC
T ss_pred hCCCCEEEECC
Confidence 99999988874
No 210
>1vq8_F 50S ribosomal protein L7AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.79.3.1 PDB: 1vq4_F* 1vq5_F* 1vq6_F* 1vq7_F* 1s72_F* 1vq9_F* 1vqk_F* 1vql_F* 1vqm_F* 1vqn_F* 1vqo_F* 1vqp_F* 1yhq_F* 1yi2_F* 1yij_F* 1yit_F* 1yj9_F* 1yjn_F* 1yjw_F* 2otj_F* ...
Probab=24.68 E-value=93 Score=25.01 Aligned_cols=19 Identities=16% Similarity=0.595 Sum_probs=16.0
Q ss_pred chHHHHHHHCCCCeEEeCC
Q 018502 171 SHVIRFLERHGIPYHYLCA 189 (355)
Q Consensus 171 ~~v~~~a~~~gIP~~~~~~ 189 (355)
..+..+|+++|||+.++.+
T Consensus 62 ~~l~~lc~~~~Vp~~~~~s 80 (120)
T 1vq8_F 62 MHIPELADEKGVPFIFVEQ 80 (120)
T ss_dssp TTHHHHHHTTCCCEEEESC
T ss_pred HHHHHHHHhcCCCEEEECC
Confidence 5688999999999988763
No 211
>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway, structural genomics; 2.10A {Thermus thermophilus} PDB: 2ywc_A*
Probab=24.61 E-value=1.5e+02 Score=29.59 Aligned_cols=56 Identities=21% Similarity=0.124 Sum_probs=38.5
Q ss_pred ceEEEEEeCCc-h-hHHHHHhhhhcCCCCeEEEEEEeCCCCCC---CchHHHHHHHCCCCeEEeCC
Q 018502 129 YKVAVLASKQE-H-CLVDFLYGWQEGKLPVEITCVISNHDRGP---NSHVIRFLERHGIPYHYLCA 189 (355)
Q Consensus 129 ~riavl~S~~g-~-~L~~ll~~~~~~~l~~eI~~Vis~~~~~~---~~~v~~~a~~~gIP~~~~~~ 189 (355)
.||++..||.- | .+..++.+. | .++.+|..++.-.. ...+.++|+++|||++.++.
T Consensus 210 ~kvvvalSGGvDSsvla~ll~~~--g---~~v~av~vd~g~~~~~e~~~v~~~~~~lgi~~~vv~~ 270 (503)
T 2ywb_A 210 DRVLLAVSGGVDSSTLALLLAKA--G---VDHLAVFVDHGLLRLGEREEVEGALRALGVNLLVVDA 270 (503)
T ss_dssp SEEEEEECSSHHHHHHHHHHHHH--T---CEEEEEEEECSCSCTTHHHHHHHHHHHTTCCEEEEEC
T ss_pred ccEEEEecCCcchHHHHHHHHHc--C---CeEEEEEEeCCCCChHHHHHHHHHHHHhCCCEEEEEC
Confidence 58999999863 4 344455443 4 67888887764211 13578899999999998863
No 212
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=24.42 E-value=1.4e+02 Score=27.40 Aligned_cols=35 Identities=9% Similarity=-0.064 Sum_probs=20.4
Q ss_pred CCceEEEEEe-CC-chhHHHHHhhhhcCCCCeEEEEEEeCCC
Q 018502 127 PKYKVAVLAS-KQ-EHCLVDFLYGWQEGKLPVEITCVISNHD 166 (355)
Q Consensus 127 ~~~riavl~S-~~-g~~L~~ll~~~~~~~l~~eI~~Vis~~~ 166 (355)
++.||+|++. |. +.. .+..++.- +.++++|+...+
T Consensus 2 ~mirvgiIG~gG~i~~~---h~~~l~~~--~~~lvav~d~~~ 38 (312)
T 3o9z_A 2 HMTRFALTGLAGYIAPR---HLKAIKEV--GGVLVASLDPAT 38 (312)
T ss_dssp -CCEEEEECTTSSSHHH---HHHHHHHT--TCEEEEEECSSC
T ss_pred CceEEEEECCChHHHHH---HHHHHHhC--CCEEEEEEcCCH
Confidence 4689999998 43 322 22222222 479999876543
No 213
>3t38_A Arsenate reductase; low molecular weight tyrosine phosphatase fold, reduction of to arsenite, oxidoreductase; 2.20A {Corynebacterium glutamicum}
Probab=24.28 E-value=2.8e+02 Score=24.76 Aligned_cols=81 Identities=12% Similarity=0.213 Sum_probs=44.0
Q ss_pred CCCceEEEEEeCCc--hhH-HHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeCCCCChhHHHHHHHh
Q 018502 126 DPKYKVAVLASKQE--HCL-VDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELV 202 (355)
Q Consensus 126 ~~~~riavl~S~~g--~~L-~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l 202 (355)
..++||.|+..|+- |.+ +.++.....+.+.+.-.+ +....+.+....+.++++||++.....+ ... ++. +
T Consensus 79 ~~~~~VLFVCtgN~cRSpmAEal~~~~~~~~~~v~SAG--t~~g~~~dp~a~~vl~e~Gidis~~~sr-~l~-~~~---~ 151 (213)
T 3t38_A 79 SPVPQVLFICVHNAGRSQIASALLSHYAGSSVEVRSAG--SLPASEIHPLVLEILSERGVNISDAFPK-PLT-DDV---I 151 (213)
T ss_dssp SCCCEEEEEESSSSSHHHHHHHHHHHHHGGGCEEEEEE--SSCCSSCCHHHHHHHHHTTCCCTTCCCC-BCC-HHH---H
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHHhccCceEEEecc--cCCCCCCCHHHHHHHHHcCCCcccCcCC-cCC-HHH---h
Confidence 35789988777764 333 445555433333333333 2322234567889999999997422111 111 111 2
Q ss_pred cCCCEEEEEee
Q 018502 203 QNTDFLVLARY 213 (355)
Q Consensus 203 ~~~Dlivla~y 213 (355)
.++|+|+....
T Consensus 152 ~~~DlIitMd~ 162 (213)
T 3t38_A 152 RASDYVITMGC 162 (213)
T ss_dssp HHCSEEEESSC
T ss_pred ccCCEEEEecC
Confidence 26999986533
No 214
>1tdj_A Biosynthetic threonine deaminase; allostery, cooperative, tetramer, regulation, pyridoxal PHOS isoleucine biosynthesis; HET: PLP; 2.80A {Escherichia coli} SCOP: c.79.1.1 d.58.18.2 d.58.18.2
Probab=24.17 E-value=56 Score=33.24 Aligned_cols=63 Identities=13% Similarity=0.085 Sum_probs=40.6
Q ss_pred ccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHHH
Q 018502 41 THGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKL 109 (355)
Q Consensus 41 ~~~ILTV~GpDr~GIVA~VS~~La~~g~NIld~~q~id~~~g~F~Mr~~v~~~~~~~~~~~L~~~l~~l 109 (355)
....+.+.=|||||-.+++++.|. +.||++.+... ...-...+.+.++-.+ ..+++++-++.+
T Consensus 337 r~~~~~v~~p~~pg~l~~~~~~l~--~~~i~~~~~~~---~~~~~~~~~~~~e~~~-~~~~~~~~~~~l 399 (514)
T 1tdj_A 337 REALLAVTIPEEKGSFLKFCQLLG--GRSVTEFNYRF---ADAKNACIFVGVRLSR-GLEERKEILQML 399 (514)
T ss_dssp CEEEEEEECCBSSSCSHHHHHTTS--SSEEEEEEEEC---CCSSBCEEEEEEECSS-THHHHHHHHHHH
T ss_pred CcccccccCCCCCchHHHHHHHhC--CCceEEEEeec---cCCCeEEEEEEEEeCC-cHHHHHHHHHHH
Confidence 346778888999999999999887 79999998763 2232334444443211 145554444444
No 215
>2j0w_A Lysine-sensitive aspartokinase 3; feedback inhibition, allosteric regulation, ACT domain, transferase, amino acid biosynthesis; HET: ADP; 2.5A {Escherichia coli} SCOP: c.73.1.3 d.58.18.10 d.58.18.10 PDB: 2j0x_A*
Probab=23.97 E-value=20 Score=35.68 Aligned_cols=36 Identities=11% Similarity=0.120 Sum_probs=30.9
Q ss_pred ccEEEEEEcC---CccchHHHHHHHHHhcCCeEeEeeee
Q 018502 41 THGIHVFHCP---DEVGIVAKLSECIASRGGNILAADVF 76 (355)
Q Consensus 41 ~~~ILTV~Gp---Dr~GIVA~VS~~La~~g~NIld~~q~ 76 (355)
+-..|++.|. +.+|+.++|-+.|+++|+||.-+++.
T Consensus 307 ~~~~i~i~~~~m~~~~g~~~~if~~l~~~~i~vd~i~ss 345 (449)
T 2j0w_A 307 NQTLLTLHSLNMLHSRGFLAEVFGILARHNISVDLITTS 345 (449)
T ss_dssp EEEEEEECCCSCSCHHHHHHHHTTTTTTTTCCCSEEEEE
T ss_pred CEEEEEEEecCCCCccCHHHHHHHHHHHcCCCEEEEEeC
Confidence 3367888885 77899999999999999999999875
No 216
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=23.87 E-value=1.1e+02 Score=29.94 Aligned_cols=50 Identities=16% Similarity=0.220 Sum_probs=29.3
Q ss_pred CceEEEEEeCC-chhHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeC
Q 018502 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (355)
Q Consensus 128 ~~riavl~S~~-g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~ 188 (355)
+.+|+|++.|. |..+...|.. .| ++++.|=.+. ...+.+++.|+++.+-+
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~--~g---~~vvvId~d~------~~v~~~~~~g~~vi~GD 54 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLS--SG---VKMVVLDHDP------DHIETLRKFGMKVFYGD 54 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH--TT---CCEEEEECCH------HHHHHHHHTTCCCEESC
T ss_pred CCeEEEECCCHHHHHHHHHHHH--CC---CCEEEEECCH------HHHHHHHhCCCeEEEcC
Confidence 45788887654 4455555543 23 5665443332 34566778899987654
No 217
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=23.56 E-value=81 Score=29.11 Aligned_cols=35 Identities=17% Similarity=0.225 Sum_probs=20.0
Q ss_pred CCceEEEEEeCC-chhHHHHHhhhhcCCCCeEEEEEEeCC
Q 018502 127 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNH 165 (355)
Q Consensus 127 ~~~riavl~S~~-g~~L~~ll~~~~~~~l~~eI~~Vis~~ 165 (355)
++.||+|++.|. |. .++..++.. -..++++|+...
T Consensus 8 ~~irv~IIG~G~iG~---~~~~~l~~~-~~~elvav~d~~ 43 (304)
T 3bio_A 8 KKIRAAIVGYGNIGR---YALQALREA-PDFEIAGIVRRN 43 (304)
T ss_dssp CCEEEEEECCSHHHH---HHHHHHHHC-TTEEEEEEECC-
T ss_pred CCCEEEEECChHHHH---HHHHHHhcC-CCCEEEEEEcCC
Confidence 357999998754 33 233333321 248888877543
No 218
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=23.26 E-value=2.7e+02 Score=27.26 Aligned_cols=77 Identities=13% Similarity=0.081 Sum_probs=40.0
Q ss_pred CceEEEEEeCCchhHHHHHhhhhcCCCCeEEEEEEeCCCCCC-CchHHHHHHHCC-CCeEEeCCCCChhHHHHHHHhc--
Q 018502 128 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGP-NSHVIRFLERHG-IPYHYLCAKENEREEELLELVQ-- 203 (355)
Q Consensus 128 ~~riavl~S~~g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~-~~~v~~~a~~~g-IP~~~~~~~~~~~~~~~~~~l~-- 203 (355)
.+|+++++.. .-...+...+. ++..+++.|.+...... ...+.++.++.+ .....+.. ....++.++++
T Consensus 312 gkrv~i~~~~--~~~~~l~~~L~--elG~~vv~v~~~~~~~~~~~~~~~ll~~~~~~~~~v~~~---~d~~~l~~~i~~~ 384 (458)
T 1mio_B 312 GKKVALLGDP--DEIIALSKFII--ELGAIPKYVVTGTPGMKFQKEIDAMLAEAGIEGSKVKVE---GDFFDVHQWIKNE 384 (458)
T ss_dssp TCEEEEEECH--HHHHHHHHHHH--TTTCEEEEEEESSCCHHHHHHHHHHHHTTTCCSCEEEES---CBHHHHHHHHHHS
T ss_pred CCEEEEEcCc--hHHHHHHHHHH--HCCCEEEEEEeCCCCHHHHHHHHHHHHhcCCCCCEEEEC---CCHHHHHHHHHhc
Confidence 4699988743 22222222222 57799999988764211 012333445543 22222221 12345666665
Q ss_pred CCCEEEEE
Q 018502 204 NTDFLVLA 211 (355)
Q Consensus 204 ~~Dlivla 211 (355)
++|+++-.
T Consensus 385 ~pDl~ig~ 392 (458)
T 1mio_B 385 GVDLLISN 392 (458)
T ss_dssp CCSEEEES
T ss_pred CCCEEEeC
Confidence 89999743
No 219
>3jvi_A Protein tyrosine phosphatase; niaid, ssgcid, seattle structural genomics center for infect disease, parasitic protozoan, dysentery; 1.80A {Entamoeba histolytica} PDB: 3js5_A* 3ily_A 3ido_A*
Probab=23.14 E-value=1.9e+02 Score=24.31 Aligned_cols=83 Identities=10% Similarity=0.033 Sum_probs=42.0
Q ss_pred CCceEEEEEeCCc--hhH-HHHHhhhh--cC---CCCeEEEEEEeCCC-CCCCchHHHHHHHCCCCeEEeCCCCChhHHH
Q 018502 127 PKYKVAVLASKQE--HCL-VDFLYGWQ--EG---KLPVEITCVISNHD-RGPNSHVIRFLERHGIPYHYLCAKENEREEE 197 (355)
Q Consensus 127 ~~~riavl~S~~g--~~L-~~ll~~~~--~~---~l~~eI~~Vis~~~-~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~ 197 (355)
+++||.|+.+|+- |.+ +.++.... .| .+.++-.++-.-|. .+.+....+.++++||++.+.+.. .. ++
T Consensus 3 ~m~~vLFVC~gN~cRSpmAE~~~~~~~~~~gl~~~~~v~SAGt~~~~~G~~~~~~a~~~l~~~Gid~~~~ar~--l~-~~ 79 (161)
T 3jvi_A 3 GSMKLLFVCLGNICRSPAAEAVMKKVIQNHHLTEKYICDSAGTCSYHEGQQADSRMRKVGKSRGYQVDSISRP--VV-SS 79 (161)
T ss_dssp -CEEEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEEESCCTTTTCBCCHHHHHHHHHTTCCCCCBCCB--CC-HH
T ss_pred CCcEEEEECCCchhHHHHHHHHHHHHHHHcCCCCcEEEEeeecCCcccCCCCCHHHHHHHHHcCcCCCCeeeE--CC-HH
Confidence 3578887777664 433 33444432 12 12222233332121 223456889999999998321111 11 11
Q ss_pred HHHHhcCCCEEEEEeecc
Q 018502 198 LLELVQNTDFLVLARYMQ 215 (355)
Q Consensus 198 ~~~~l~~~Dlivla~y~~ 215 (355)
.+.++|+|+...-.+
T Consensus 80 ---~~~~~DlIl~Md~~~ 94 (161)
T 3jvi_A 80 ---DFKNFDYIFAMDNDN 94 (161)
T ss_dssp ---HHHHCSEEEESSHHH
T ss_pred ---HhcCCCEEEEeChHH
Confidence 223699998765443
No 220
>3r5t_A Ferric vibriobactin ABC transporter, periplasmic vibriobactin-binding protein; iron-vibriobactin transport protein; HET: VBN; 1.45A {Vibrio cholerae} PDB: 3r5s_A*
Probab=22.98 E-value=2.5e+02 Score=25.27 Aligned_cols=76 Identities=8% Similarity=0.014 Sum_probs=39.6
Q ss_pred CCCceEEEEEeCCchhHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeCCCCChhHHHHHHHhcCC
Q 018502 126 DPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNT 205 (355)
Q Consensus 126 ~~~~riavl~S~~g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l~~~ 205 (355)
.++.||+.+. .+.. +++..+ | ..++++-.........+..+..+..++|..--. .+.+-|.++++ +|
T Consensus 21 ~~p~RIV~l~---~~~~-e~l~aL--G---~~~Vg~~~~~~~~~~~~~~~~~~~~~~~~vG~~--~~~n~E~I~al--~P 87 (305)
T 3r5t_A 21 SQPKRILSTA---VTVT-GTLLAI--D---APVIASAATTQSTFFEQWRKLAELRQVKKLWPA--GSVDLESVYVE--QP 87 (305)
T ss_dssp SCCSSEEESC---HHHH-HHHHHT--T---CCEEEEEECTTSCCCTTTHHHHHHTTCEEEEET--TCCCHHHHHHH--CC
T ss_pred CCCeEEEEEC---cchh-HHHHHc--C---CceEEEeccccccccchhHhhHhhcCCCccCCC--CCCCHHHHHhc--CC
Confidence 4668988774 3333 444432 3 368887654321111122233345678865311 12233455555 99
Q ss_pred CEEEEEeec
Q 018502 206 DFLVLARYM 214 (355)
Q Consensus 206 Dlivla~y~ 214 (355)
|+|+...+.
T Consensus 88 DLIi~~~~~ 96 (305)
T 3r5t_A 88 DLIVVSMIG 96 (305)
T ss_dssp SEEEEESSS
T ss_pred CEEEEeccc
Confidence 999877653
No 221
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=22.95 E-value=81 Score=25.21 Aligned_cols=63 Identities=17% Similarity=-0.001 Sum_probs=33.2
Q ss_pred CCCceEEEEEeCCch-hH-H-HHHhhhhcCCCCeEEEEEEe-CCCCC-C--------------CchHHHHHHHCCCCeEE
Q 018502 126 DPKYKVAVLASKQEH-CL-V-DFLYGWQEGKLPVEITCVIS-NHDRG-P--------------NSHVIRFLERHGIPYHY 186 (355)
Q Consensus 126 ~~~~riavl~S~~g~-~L-~-~ll~~~~~~~l~~eI~~Vis-~~~~~-~--------------~~~v~~~a~~~gIP~~~ 186 (355)
.+++||.++.++..+ .+ . .+-+..++..++++|.++=. ..+.. . ...+.+.|.++|||+..
T Consensus 4 ~~~mkIlL~C~aGmSTsllv~km~~~a~~~gi~v~i~a~~~~~~~~~~~~~DvvLLgPQV~y~~~~ik~~~~~~~ipV~v 83 (108)
T 3nbm_A 4 SKELKVLVLCAGSGTSAQLANAINEGANLTEVRVIANSGAYGAHYDIMGVYDLIILAPQVRSYYREMKVDAERLGIQIVA 83 (108)
T ss_dssp -CCEEEEEEESSSSHHHHHHHHHHHHHHHHTCSEEEEEEETTSCTTTGGGCSEEEECGGGGGGHHHHHHHHTTTTCEEEE
T ss_pred ccCceEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEEcchHHHHhhccCCCEEEEChHHHHHHHHHHHHhhhcCCcEEE
Confidence 467788877765543 22 1 12223334446777766311 11110 0 12356677778899988
Q ss_pred eC
Q 018502 187 LC 188 (355)
Q Consensus 187 ~~ 188 (355)
++
T Consensus 84 I~ 85 (108)
T 3nbm_A 84 TR 85 (108)
T ss_dssp CC
T ss_pred eC
Confidence 76
No 222
>3o85_A Ribosomal protein L7AE; alpha beta sandwich fold, K-turn RNA binding protein, KINK T ribosomal protein; 1.81A {Giardia lamblia}
Probab=22.91 E-value=94 Score=25.30 Aligned_cols=50 Identities=20% Similarity=0.333 Sum_probs=28.0
Q ss_pred EEeCCchhHHHHHhhhhcCCCCeEEEEEEeCCCCCC-CchHHHHHHHCCCCeEEeCC
Q 018502 134 LASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGP-NSHVIRFLERHGIPYHYLCA 189 (355)
Q Consensus 134 l~S~~g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~-~~~v~~~a~~~gIP~~~~~~ 189 (355)
+++|.... +..++.|+ +..+.+-.+-+... -..+..+|+++|||+.++.+
T Consensus 32 lv~G~~~v----~kai~~gk--a~lViiA~D~~p~~~~~~l~~lc~~~~VP~~~v~s 82 (122)
T 3o85_A 32 IKRGANEA----LKQVNRGK--AELVIIAADADPIEIVLHLPLACEDKGVPYVFIGS 82 (122)
T ss_dssp EEESHHHH----HHHHHTTC--CSEEEEETTCSSGGGGTTHHHHHHTTTCCEEEESC
T ss_pred EeEcHHHH----HHHHHcCC--ceEEEEeCCCChHHHHHHHHHHHHHhCCCEEEECC
Confidence 44454444 44444563 45543333322111 24678899999999988763
No 223
>2xzm_U Ribosomal protein L7AE containing protein; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_U
Probab=22.88 E-value=98 Score=25.46 Aligned_cols=19 Identities=16% Similarity=0.144 Sum_probs=16.2
Q ss_pred chHHHHHHHCCCCeEEeCC
Q 018502 171 SHVIRFLERHGIPYHYLCA 189 (355)
Q Consensus 171 ~~v~~~a~~~gIP~~~~~~ 189 (355)
..+..+|++++||+++++.
T Consensus 57 ~~i~~lc~~~~Ip~~~v~s 75 (126)
T 2xzm_U 57 KLVKALCAKNEIKYVSVPK 75 (126)
T ss_dssp HHHHHHHHHTTCCEEEESC
T ss_pred HHHHHHHHHhCCCEEEECC
Confidence 3578999999999998874
No 224
>1zzg_A Glucose-6-phosphate isomerase; structural genomics, riken structural genomics/PR initiative, RSGI, NPPSFA; 1.95A {Thermus thermophilus}
Probab=22.75 E-value=68 Score=31.77 Aligned_cols=58 Identities=14% Similarity=0.235 Sum_probs=36.0
Q ss_pred CceEEEEEeCCchhHHHHH-----hhh-h--cCC-CCeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeCC
Q 018502 128 KYKVAVLASKQEHCLVDFL-----YGW-Q--EGK-LPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCA 189 (355)
Q Consensus 128 ~~riavl~S~~g~~L~~ll-----~~~-~--~~~-l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~ 189 (355)
+.-+++.+|++|+..+.+. ..| . .|+ ....+++| |++. .+++.+.|+++||+++.++.
T Consensus 116 ~~TlviviSKSGtT~ET~~~~~~ar~~l~~~~G~~~~~~~vav-T~~~---~s~L~~~a~~~Gi~~f~~~d 182 (415)
T 1zzg_A 116 RKTLVNAVSKSGSTAETLAGLAVFLKWLKAHLGEDWRRHLVVT-TDPK---EGPLRAFAEREGLKAFAIPK 182 (415)
T ss_dssp GGEEEEEEESSSCCHHHHHHHHHHHHHHHHHHGGGGGGGEEEE-ECSS---SSHHHHHHHHHTCEEEECCT
T ss_pred CCEEEEEEeCCCCCHHHHHHHHHHHHHHHHhcCccccCeEEEE-eCCC---CChHHHHHHHhCCcEEEecc
Confidence 3458889999997544332 112 1 131 12456654 4432 35899999999998887763
No 225
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=22.54 E-value=3.6e+02 Score=24.28 Aligned_cols=104 Identities=13% Similarity=0.178 Sum_probs=53.6
Q ss_pred CceEEEEEeCC-chhHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeCCCCChhHHHHHHHhcCCC
Q 018502 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTD 206 (355)
Q Consensus 128 ~~riavl~S~~-g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l~~~D 206 (355)
.++|+|++.|. |..+...+.. .| ++|. +.++.. .-.+.+++.|+.+... +++.+++.++|
T Consensus 155 g~~v~IiG~G~iG~~~a~~l~~--~G---~~V~--~~dr~~----~~~~~~~~~g~~~~~~--------~~l~~~l~~aD 215 (293)
T 3d4o_A 155 GANVAVLGLGRVGMSVARKFAA--LG---AKVK--VGARES----DLLARIAEMGMEPFHI--------SKAAQELRDVD 215 (293)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH--TT---CEEE--EEESSH----HHHHHHHHTTSEEEEG--------GGHHHHTTTCS
T ss_pred CCEEEEEeeCHHHHHHHHHHHh--CC---CEEE--EEECCH----HHHHHHHHCCCeecCh--------hhHHHHhcCCC
Confidence 46899987654 3333333332 23 5553 333321 1123445666543211 12445566899
Q ss_pred EEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChHHHhhcCCCeEEecCCCCCCCCCchHHHHHHHhC
Q 018502 207 FLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAG 283 (355)
Q Consensus 207 livla~y~~~~~~~~~~~~~~~~~~~~~~~~~~s~y~~~il~~~~l~~~~~~~INiHpslLP~yrG~~p~~~A~~~G 283 (355)
+++++--.+ ++..+.++..+.+.+=+.-+--|. +.. +.++-..|
T Consensus 216 vVi~~~p~~------------------------------~i~~~~l~~mk~~~~lin~ar~~~--~~~-~~~a~~~G 259 (293)
T 3d4o_A 216 VCINTIPAL------------------------------VVTANVLAEMPSHTFVIDLASKPG--GTD-FRYAEKRG 259 (293)
T ss_dssp EEEECCSSC------------------------------CBCHHHHHHSCTTCEEEECSSTTC--SBC-HHHHHHHT
T ss_pred EEEECCChH------------------------------HhCHHHHHhcCCCCEEEEecCCCC--CCC-HHHHHHCC
Confidence 999874333 777777877765554444443332 333 35555555
No 226
>4gpa_A Glutamate receptor 4; PBP fold, ligand-gated ION channel, ION transport, transmembrane AMPA receptor regulating proteins, cornichons, ckamp44; HET: NAG; 2.25A {Rattus norvegicus}
Probab=22.50 E-value=4.2e+02 Score=23.68 Aligned_cols=94 Identities=6% Similarity=0.004 Sum_probs=55.1
Q ss_pred EEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHHHHhhhhhccceeeeC
Q 018502 44 IHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMRSVVRVP 123 (355)
Q Consensus 44 ILTV~GpDr~GIVA~VS~~La~~g~NIld~~q~id~~~g~F~Mr~~v~~~~~~~~~~~L~~~l~~la~~lg~~~~~~~~~ 123 (355)
|..|+||...+...+++..+...++=.+..+....... .|..++. + .. .+++.++.+.+| |
T Consensus 70 V~aiiG~~~S~~~~~v~~i~~~~~ip~is~~~~~~~~~-~~~~~~~---~---~~----~~a~~~l~~~~~-----w--- 130 (389)
T 4gpa_A 70 VFAIFGLYDKRSVHTLTSFCSALHISLITPSFPTEGES-QFVLQLR---P---SL----RGALLSLLDHYE-----W--- 130 (389)
T ss_dssp CSEEEECCCTTTHHHHHHHHHHTTCEEEECSCCCSSCC-SSEEECS---C---CC----HHHHHHHHHHTT-----C---
T ss_pred CEEEEeCCccHHHHHHHHHHHHhCCCceeccccccccc-cCCcccc---C---CH----HHHHHHHHHHcC-----C---
Confidence 66788999999999999998888876665444332222 2322211 1 11 235666666664 4
Q ss_pred CCCCCceEEEEEeCC--chhHHHHHhhhhcCCCCeEEEEEEe
Q 018502 124 DIDPKYKVAVLASKQ--EHCLVDFLYGWQEGKLPVEITCVIS 163 (355)
Q Consensus 124 ~~~~~~riavl~S~~--g~~L~~ll~~~~~~~l~~eI~~Vis 163 (355)
+||+++.+.. +..++++++..... ..+|+....
T Consensus 131 -----~~vaii~~~d~~~~~~~~~~~~~~~~--g~~v~~~~~ 165 (389)
T 4gpa_A 131 -----NCFVFLYDTDRGYSILQAIMEKAGQN--GWHVSAICV 165 (389)
T ss_dssp -----CEEEEEECSTTCSHHHHHHHHHHHTT--TCEEEEEEC
T ss_pred -----cEEEEEEecchhhHHHHHHHHHHHhc--CceEEEEee
Confidence 3788776543 34566666654433 355555443
No 227
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=22.22 E-value=2e+02 Score=28.64 Aligned_cols=163 Identities=10% Similarity=0.003 Sum_probs=81.6
Q ss_pred cEEEEEEcCC-ccchHHHHHHHHHhcCCeEe-Eeee--ecc----CCCCeEEEEEE--------------EEeC---CCC
Q 018502 42 HGIHVFHCPD-EVGIVAKLSECIASRGGNIL-AADV--FVP----EKKNVFYSRSE--------------FIFD---PIK 96 (355)
Q Consensus 42 ~~ILTV~GpD-r~GIVA~VS~~La~~g~NIl-d~~q--~id----~~~g~F~Mr~~--------------v~~~---~~~ 96 (355)
+.-+.++|.- -+|=+..+...|.+.|+.+. +..- +.+ .....+++.+- +.+| ...
T Consensus 203 ~~~VNiiG~~~~~gd~~eik~lL~~~Gi~v~~~~~gg~~~~el~~~~~A~~niv~~~~~~~~~A~~Le~~~GiP~i~~~p 282 (483)
T 3pdi_A 203 VHDVNLIGEYNIAGEFWHVLPLLDELGLRVLCTLAGDARYREVQTMHRAEVNMMVCSKAMLNVARKLQETYGTPWFEGSF 282 (483)
T ss_dssp CEEEEEESCCCBTTGGGGTHHHHHHHTEEEEEEETSSBCHHHHTTGGGCSEEEEESCCTTHHHHHHHHHHHCCCEEEECS
T ss_pred CCeEEEEcCCCChhHHHHHHHHHHHCCCcEEEECCCcCCHHHHHhhhcCCEEEEEchhhHHHHHHHHHHHhCCCEeecCC
Confidence 3567777753 35667788999999999886 2211 000 00111332210 0011 113
Q ss_pred CChHHHHHHHHHHHhhhhhccc--------------eee----eCCCCCCceEEEEEeCCc-hhHHHHHhhhhcCCCCeE
Q 018502 97 WPREQMDEDFFKLSKMFNAMRS--------------VVR----VPDIDPKYKVAVLASKQE-HCLVDFLYGWQEGKLPVE 157 (355)
Q Consensus 97 ~~~~~L~~~l~~la~~lg~~~~--------------~~~----~~~~~~~~riavl~S~~g-~~L~~ll~~~~~~~l~~e 157 (355)
+..+...+-|.++++-+|.... .|. ....=.-+|++|++.+.- ..+..+|. ++..+
T Consensus 283 ~Gi~~T~~~L~~ia~~~g~~~i~~~~e~~i~~er~~~~~al~~~~~~l~GKrv~i~~~~~~~~~l~~~L~-----ElGme 357 (483)
T 3pdi_A 283 YGITDTSQALRDFARLLDDPDLTARTEALIAREEAKVRAALEPWRARLEGKRVLLYTGGVKSWSVVSALQ-----DLGMK 357 (483)
T ss_dssp SSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEECSSSCHHHHHHHHH-----HHTCE
T ss_pred CCHHHHHHHHHHHHHHhCCcchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEECCCchHHHHHHHHH-----HCCCE
Confidence 5677777777777777763100 000 000012479998764321 23444443 35689
Q ss_pred EEEEEeCCCCCCCchHHHHHHHCCCCeEEeCCCCChhHHHHHHHhc--CCCEEEEEeec
Q 018502 158 ITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ--NTDFLVLARYM 214 (355)
Q Consensus 158 I~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l~--~~Dlivla~y~ 214 (355)
++.+.+.... .....+..+..+.....+.. .+..++.+.++ +||+++-..+.
T Consensus 358 vv~~gt~~~~--~~d~~~~~~~l~~~~~i~~d---~d~~el~~~i~~~~pDL~ig~~~~ 411 (483)
T 3pdi_A 358 VVATGTKKST--EEDKARIRELMGDDVKMLDE---GNARVLLKTVDEYQADILIAGGRN 411 (483)
T ss_dssp EEEECBSSSC--HHHHHHHHHHSCSSCCBCCS---CSHHHHHHHHHHTTCSEEECCGGG
T ss_pred EEEEecCCCC--HHHHHHHHHhcCCCCEEEeC---CCHHHHHHHHHhcCCCEEEECCch
Confidence 9887665421 11222333334432222221 12356667665 89999865444
No 228
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=22.12 E-value=68 Score=30.16 Aligned_cols=48 Identities=13% Similarity=0.005 Sum_probs=25.7
Q ss_pred CCceEEEEEeCC-ch-hHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCC
Q 018502 127 PKYKVAVLASKQ-EH-CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGI 182 (355)
Q Consensus 127 ~~~riavl~S~~-g~-~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gI 182 (355)
++.||+|++.|. +. .+...+.. . -.+++++|+.... ....+++++++.
T Consensus 4 ~~~rigiIG~G~~g~~~~~~~l~~---~-~~~~l~av~d~~~----~~~~~~a~~~~~ 53 (359)
T 3m2t_A 4 SLIKVGLVGIGAQMQENLLPSLLQ---M-QDIRIVAACDSDL----ERARRVHRFISD 53 (359)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHT---C-TTEEEEEEECSSH----HHHGGGGGTSCS
T ss_pred CcceEEEECCCHHHHHHHHHHHHh---C-CCcEEEEEEcCCH----HHHHHHHHhcCC
Confidence 357999998876 32 22222221 1 1488888876432 233445555543
No 229
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=22.00 E-value=1.1e+02 Score=26.41 Aligned_cols=75 Identities=7% Similarity=0.072 Sum_probs=41.7
Q ss_pred CCCCceEEEEEeCCchhHHHHHhhhhc-CCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeC-CCCChh--HHHHHH
Q 018502 125 IDPKYKVAVLASKQEHCLVDFLYGWQE-GKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC-AKENER--EEELLE 200 (355)
Q Consensus 125 ~~~~~riavl~S~~g~~L~~ll~~~~~-~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~-~~~~~~--~~~~~~ 200 (355)
..+++||+|+.++..-. +.+ .. |+ +.+. +...+.+++++.|..+.... -+++.. .+.+.+
T Consensus 12 ~~~~~rv~IittGde~~-~~~----~~~G~--------i~Ds---n~~~L~~~l~~~G~~v~~~~iv~Dd~~~I~~al~~ 75 (178)
T 2pjk_A 12 APKSLNFYVITISTSRY-EKL----LKKEP--------IVDE---SGDIIKQLLIENGHKIIGYSLVPDDKIKILKAFTD 75 (178)
T ss_dssp -CCCCEEEEEEECHHHH-HHH----HTTCC--------CCCH---HHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHH
T ss_pred CCCCCEEEEEEeCcccc-ccc----ccCCe--------Eeeh---HHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHH
Confidence 34578999999876422 222 22 32 1111 12357788889998665433 122211 134445
Q ss_pred HhcC--CCEEEEEeecc
Q 018502 201 LVQN--TDFLVLARYMQ 215 (355)
Q Consensus 201 ~l~~--~Dlivla~y~~ 215 (355)
.+.+ +|+|++.|=.-
T Consensus 76 a~~~~~~DlVittGG~s 92 (178)
T 2pjk_A 76 ALSIDEVDVIISTGGTG 92 (178)
T ss_dssp HHTCTTCCEEEEESCCS
T ss_pred HHhcCCCCEEEECCCCC
Confidence 5544 89999988765
No 230
>2yfk_A Aspartate/ornithine carbamoyltransferase; transcarbamylase; 2.55A {Enterococcus faecalis}
Probab=21.98 E-value=3.2e+02 Score=27.07 Aligned_cols=86 Identities=9% Similarity=0.067 Sum_probs=46.0
Q ss_pred HHHHCCCCeEEeCCCCChhHHHHHHHhcCCCEEEEEeeccccchhhHhh-----hhhhhhhhhcc-cCccccc-ccccCC
Q 018502 176 FLERHGIPYHYLCAKENEREEELLELVQNTDFLVLARYMQPVPLQKEAY-----LGYKLLESLSS-KGSLTSY-FNMILS 248 (355)
Q Consensus 176 ~a~~~gIP~~~~~~~~~~~~~~~~~~l~~~Dlivla~y~~~~~~~~~~~-----~~~~~~~~~~~-~~~~s~y-~~~il~ 248 (355)
.|++.|..+.... ++.+.+.++|+|.+-.|.. .-.|.|-+ +++.-++..+. ..+.--| -+|.+.
T Consensus 243 ~a~~~G~~v~~~~--------d~~eav~~ADVVytd~W~s-m~~Q~ER~~~~~~g~~~~~~~~~~~~~~~~~~~~~y~vt 313 (418)
T 2yfk_A 243 NAAEFGGNFTKTN--------SMAEAFKDADVVYPKSWAP-FAAMEKRTELYGNGDQAGIDQLEQELLSQNKKHKDWECT 313 (418)
T ss_dssp HHHHHSSEEEEES--------CHHHHHTTCSEEEECCCCC-HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHGGGTTCCBC
T ss_pred HHHHcCCEEEEEc--------CHHHHhcCCCEEEEccccc-hhHHHHHhhhhccccchhhhhhhhhhhhHHHHHhhcCCC
Confidence 3556676555432 2345566899998876641 00133321 21110000000 0011112 257899
Q ss_pred hHHHhhcCC-CeEEecCCCCCCCC-C
Q 018502 249 GKFLRSYGK-DVINIHHGLLPSFK-G 272 (355)
Q Consensus 249 ~~~l~~~~~-~~INiHpslLP~yr-G 272 (355)
+++++..+. .+|=+||. |++| |
T Consensus 314 ~elm~~ak~~dai~MHcL--Pa~r~~ 337 (418)
T 2yfk_A 314 EELMKTTKDGKALYMHCL--PADITG 337 (418)
T ss_dssp HHHHHTSGGGCCEECCCS--CCCEET
T ss_pred HHHHHhcCCCCeEEECCC--CCCCcc
Confidence 999998764 79999985 9985 5
No 231
>1xng_A NH(3)-dependent NAD(+) synthetase; amidotransferase, ligase; HET: DND ATP; 1.70A {Helicobacter pylori} SCOP: c.26.2.1 PDB: 1xnh_A
Probab=21.78 E-value=2.1e+02 Score=25.74 Aligned_cols=57 Identities=12% Similarity=0.061 Sum_probs=36.8
Q ss_pred CceEEEEEeCC-chhH-HHHHhhhhcCCCCeEEEEEEeCCCCCCC---chHHHHHHHCCCCeEEeC
Q 018502 128 KYKVAVLASKQ-EHCL-VDFLYGWQEGKLPVEITCVISNHDRGPN---SHVIRFLERHGIPYHYLC 188 (355)
Q Consensus 128 ~~riavl~S~~-g~~L-~~ll~~~~~~~l~~eI~~Vis~~~~~~~---~~v~~~a~~~gIP~~~~~ 188 (355)
..+|++..||. .|.+ ..++.... +.++.+|..++...+. ..+.++|++.|||+..++
T Consensus 25 ~~~vvv~lSGGiDSsv~~~l~~~~~----~~~v~av~~~~~~~~~~e~~~a~~~a~~lgi~~~~i~ 86 (268)
T 1xng_A 25 FKKVVYGLSGGLDSAVVGVLCQKVF----KENAHALLMPSSVSMPENKTDALNLCEKFSIPYTEYS 86 (268)
T ss_dssp CCCEEEECCSSHHHHHHHHHHHHHH----GGGEEEEECCCSSSCHHHHHHHHHHHHHHTCCEEECC
T ss_pred CCCEEEEccCcHHHHHHHHHHHHhC----CCCEEEEEeCCCCCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 35899999986 3543 33443321 3567777777542221 357788999999998876
No 232
>1vbk_A Hypothetical protein PH1313; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Pyrococcus horikoshii} SCOP: c.26.2.6 d.308.1.1
Probab=21.76 E-value=1e+02 Score=28.83 Aligned_cols=78 Identities=13% Similarity=0.028 Sum_probs=46.2
Q ss_pred CceEEEEEeCCchhHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHC-------CCCeEEeCCCCChhHHHHHH
Q 018502 128 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERH-------GIPYHYLCAKENEREEELLE 200 (355)
Q Consensus 128 ~~riavl~S~~g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~-------gIP~~~~~~~~~~~~~~~~~ 200 (355)
..|++++.||-.|...+. ...+.| +++.++..+-.......+.++|+.. +||+++++. -++ ..+
T Consensus 179 ~~kvlvllSGvDS~vaa~-ll~~~G---~~v~~v~~~~~~~~~~~a~~~a~~l~~~~~~~~i~~~vv~~---~~~--~~~ 249 (307)
T 1vbk_A 179 EGRMIGILHDELSALAIF-LMMKRG---VEVIPVYIGKDDKNLEKVRSLWNLLKRYSYGSKGFLVVAES---FDR--VLK 249 (307)
T ss_dssp TCEEEEECSSHHHHHHHH-HHHHBT---CEEEEEEESCSSHHHHHHHHHHHHHHTTCTTSCCCCEEESS---HHH--HHH
T ss_pred CCcEEEEEeCCcHHHHHH-HHHhCC---CeEEEEEEEECHHHHHHHHHHHHHHhhhccCCCCcEEEeCC---CHH--HHH
Confidence 469999999933433222 222344 7888887772110012467777766 899999861 111 113
Q ss_pred Hhc--CCCEEEEEeec
Q 018502 201 LVQ--NTDFLVLARYM 214 (355)
Q Consensus 201 ~l~--~~Dlivla~y~ 214 (355)
+.. ++|.++++.|.
T Consensus 250 ~A~~~ga~~I~tG~~~ 265 (307)
T 1vbk_A 250 LIRDFGVKGVIKGLRP 265 (307)
T ss_dssp HHHHHTCCEEECCCCG
T ss_pred HHHHcCCCEEEECccc
Confidence 322 89999887764
No 233
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=21.67 E-value=76 Score=31.38 Aligned_cols=71 Identities=20% Similarity=0.239 Sum_probs=41.2
Q ss_pred CCceEEEEEeCC-chhHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeCCCCChhHHHHHHHhc--
Q 018502 127 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ-- 203 (355)
Q Consensus 127 ~~~riavl~S~~-g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l~-- 203 (355)
..|||.|++.|. |..|...|.. + .++|+.|=.+. ..+.++.+++++++.+-+ ..+.++++...
T Consensus 2 ~~M~iiI~G~G~vG~~la~~L~~--~---~~~v~vId~d~-----~~~~~~~~~~~~~~i~Gd----~~~~~~L~~Agi~ 67 (461)
T 4g65_A 2 NAMKIIILGAGQVGGTLAENLVG--E---NNDITIVDKDG-----DRLRELQDKYDLRVVNGH----ASHPDVLHEAGAQ 67 (461)
T ss_dssp CCEEEEEECCSHHHHHHHHHTCS--T---TEEEEEEESCH-----HHHHHHHHHSSCEEEESC----TTCHHHHHHHTTT
T ss_pred CcCEEEEECCCHHHHHHHHHHHH--C---CCCEEEEECCH-----HHHHHHHHhcCcEEEEEc----CCCHHHHHhcCCC
Confidence 458999988766 5565555432 2 47776443332 235566678898876533 22334444433
Q ss_pred CCCEEEEE
Q 018502 204 NTDFLVLA 211 (355)
Q Consensus 204 ~~Dlivla 211 (355)
++|+++.+
T Consensus 68 ~ad~~ia~ 75 (461)
T 4g65_A 68 DADMLVAV 75 (461)
T ss_dssp TCSEEEEC
T ss_pred cCCEEEEE
Confidence 68877643
No 234
>3aek_B Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_B* 3aer_B 3aes_B* 3aeu_B 3aet_B
Probab=21.67 E-value=3.2e+02 Score=27.41 Aligned_cols=158 Identities=7% Similarity=-0.073 Sum_probs=80.5
Q ss_pred cEEEEEEcCCc-----cchHHHHHHHHHhcCCeEeEeee---ec----cCCCCeEEEEEEE--------------EeC--
Q 018502 42 HGIHVFHCPDE-----VGIVAKLSECIASRGGNILAADV---FV----PEKKNVFYSRSEF--------------IFD-- 93 (355)
Q Consensus 42 ~~ILTV~GpDr-----~GIVA~VS~~La~~g~NIld~~q---~i----d~~~g~F~Mr~~v--------------~~~-- 93 (355)
+.-+.++|.-- +|=+..+...|.+.|+++.-.-. +. ....-.+++.+-- .+|
T Consensus 153 ~~~VNIlG~~~~g~~~~gD~~eikrlL~~~Gi~v~~~~pgg~t~~ei~~~~~A~~niv~~~~~g~~~A~~Le~r~GiP~i 232 (525)
T 3aek_B 153 EVTCNLLGATALGFRHRDDVAEVTKLLATMGIKVNVCAPLGASPDDLRKLGQAHFNVLMYPETGESAARHLERACKQPFT 232 (525)
T ss_dssp SCEEEEEEECTTCTTHHHHHHHHHHHHHTTTCEEEEEEETTCCHHHHHTGGGSSEEEECCHHHHHHHHHHHHHHSCCCBC
T ss_pred CCceEEEecCCCCCCChhhHHHHHHHHHHCCCeEEEEeCCCCCHHHHHhhccCCEEEEEChhhHHHHHHHHHHHcCCCce
Confidence 34566666443 46778999999999998876311 10 0001123322210 000
Q ss_pred -CCCCChHHHHHHHHHHHhhhhhccceeeeCCC---------------CCCceEEEEEeCCchhHHHHHhhhhcCCCCeE
Q 018502 94 -PIKWPREQMDEDFFKLSKMFNAMRSVVRVPDI---------------DPKYKVAVLASKQEHCLVDFLYGWQEGKLPVE 157 (355)
Q Consensus 94 -~~~~~~~~L~~~l~~la~~lg~~~~~~~~~~~---------------~~~~riavl~S~~g~~L~~ll~~~~~~~l~~e 157 (355)
...+..+.-.+-|.++++-+|... .+... -..+|++|++ .+.-...+...+ ..++..+
T Consensus 233 ~~~PiG~~~T~~~Lr~ia~~~g~~~---~i~~~r~~~~~~~~~~d~~~l~GKrv~i~g--d~~~~~~la~~L-~~ElGm~ 306 (525)
T 3aek_B 233 KIVPIGVGATRDFLAEVSKITGLPV---VTDESTLRQPWWSASVDSTYLTGKRVFIFG--DGTHVIAAARIA-AKEVGFE 306 (525)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHCCCC---CCCCTTCCHHHHHHSGGGGGGTTCEEEECS--SHHHHHHHHHHH-HHTTCCE
T ss_pred ecCCcCHHHHHHHHHHHHHHHCCCH---HHHHHHHHHHHHHHhhhhhhcCCCEEEEEc--CchHHHHHHHHH-HHHcCCe
Confidence 124456777777888888777531 11110 1235888773 332222222211 1246688
Q ss_pred EEEEEeCCCCCCCchHHHHHHHCCCCeEEeCCCCChhHHHHHHHhc--CCCEEEEE
Q 018502 158 ITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ--NTDFLVLA 211 (355)
Q Consensus 158 I~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l~--~~Dlivla 211 (355)
++.+-+.... ....+.+.+++.+-.+...+ ...++.+.++ +||+++-.
T Consensus 307 vv~~gt~~~~-~~~~~~~~~~~~~~~v~i~~-----D~~el~~~i~~~~pDL~ig~ 356 (525)
T 3aek_B 307 VVGMGCYNRE-MARPLRTAAAEYGLEALITD-----DYLEVEKAIEAAAPELILGT 356 (525)
T ss_dssp EEEEEESCGG-GHHHHHHHHHHTTCCCEECS-----CHHHHHHHHHHHCCSEEEEC
T ss_pred eEEEecCchh-HHHHHHHHHHhcCCcEEEeC-----CHHHHHHHHhhcCCCEEEec
Confidence 8776664321 11234455666654444322 1245666665 89999743
No 235
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=21.65 E-value=2.8e+02 Score=25.70 Aligned_cols=52 Identities=10% Similarity=0.028 Sum_probs=30.4
Q ss_pred CceEEEEEeCC-ch--hHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCCeEEeC
Q 018502 128 KYKVAVLASKQ-EH--CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (355)
Q Consensus 128 ~~riavl~S~~-g~--~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~ 188 (355)
++||+++..+. || .+..|...++.. .++|+.+.+.. ..+..+..|++++.++
T Consensus 7 m~kIl~~~~~~~Gh~~p~~~la~~L~~~--G~~V~~~~~~~-------~~~~~~~~g~~~~~~~ 61 (430)
T 2iyf_A 7 PAHIAMFSIAAHGHVNPSLEVIRELVAR--GHRVTYAIPPV-------FADKVAATGPRPVLYH 61 (430)
T ss_dssp -CEEEEECCSCHHHHGGGHHHHHHHHHT--TCEEEEEECGG-------GHHHHHTTSCEEEECC
T ss_pred cceEEEEeCCCCccccchHHHHHHHHHC--CCeEEEEeCHH-------HHHHHHhCCCEEEEcC
Confidence 46899876543 44 244555555432 47887654432 2455667888887665
No 236
>3j21_Z 50S ribosomal protein L30E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=21.63 E-value=71 Score=24.78 Aligned_cols=17 Identities=12% Similarity=0.235 Sum_probs=13.8
Q ss_pred chHHHHHHHCCCCeEEe
Q 018502 171 SHVIRFLERHGIPYHYL 187 (355)
Q Consensus 171 ~~v~~~a~~~gIP~~~~ 187 (355)
..+..+|++++||++.+
T Consensus 47 ~~i~~~c~~~~ip~~~~ 63 (99)
T 3j21_Z 47 DDIYYYAKLSDIPVYEF 63 (99)
T ss_dssp HHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHcCCCEEEe
Confidence 35778899999998766
No 237
>3a8t_A Adenylate isopentenyltransferase; rossmann fold protein; HET: ATP; 2.37A {Humulus lupulus}
Probab=21.31 E-value=1.6e+02 Score=28.30 Aligned_cols=94 Identities=15% Similarity=0.095 Sum_probs=57.2
Q ss_pred cEEEEEEcCCccchHHHHHHHHHh-cCCeEeEeeeec--------------cCCCCe-EEEEEEEEeCCCCCChHHHHHH
Q 018502 42 HGIHVFHCPDEVGIVAKLSECIAS-RGGNILAADVFV--------------PEKKNV-FYSRSEFIFDPIKWPREQMDED 105 (355)
Q Consensus 42 ~~ILTV~GpDr~GIVA~VS~~La~-~g~NIld~~q~i--------------d~~~g~-F~Mr~~v~~~~~~~~~~~L~~~ 105 (355)
.-+|.++||--.|= ..++..||+ .|+.|++.+... ....|. +.++=.++......+...+++.
T Consensus 40 ~~lIvI~GPTgsGK-TtLa~~LA~~l~~eiIs~Ds~qvYr~mdIgTakp~~eE~~gvphhlidi~~~~~e~~s~~~F~~~ 118 (339)
T 3a8t_A 40 EKLLVLMGATGTGK-SRLSIDLAAHFPLEVINSDKMQVYKGLDITTNKISVPDRGGVPHHLLGEVDPARGELTPADFRSL 118 (339)
T ss_dssp CEEEEEECSTTSSH-HHHHHHHHTTSCEEEEECCSSTTBSSCTTTTTCCCSGGGTTCCEESSSCBCGGGCCCCHHHHHHH
T ss_pred CceEEEECCCCCCH-HHHHHHHHHHCCCcEEcccccccccceeeecCCCCHHHHcCCCEeeccccCcccCccCHHHHHHH
Confidence 35888999999996 556777776 577888866541 111222 2222223331224566666665
Q ss_pred HHHHHhhhhhccceeeeCCCCCCceEEEEEeCCchhHHHHHhh
Q 018502 106 FFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYG 148 (355)
Q Consensus 106 l~~la~~lg~~~~~~~~~~~~~~~riavl~S~~g~~L~~ll~~ 148 (355)
-.+..+++- .+.|+.|++.|.+..++++++.
T Consensus 119 a~~~i~~i~------------~~g~~pIlvGGtglYi~all~g 149 (339)
T 3a8t_A 119 AGKAVSEIT------------GRRKLPVLVGGSNSFIHALLVD 149 (339)
T ss_dssp HHHHHHHHH------------HTTCEEEEECCCHHHHHHHHBS
T ss_pred HHHHHHHHH------------hcCCeEEEEcCHHHHHHHHHhC
Confidence 554444331 2458888888888888888864
No 238
>2vxo_A GMP synthase [glutamine-hydrolyzing]; proto-oncogene, phosphoprotein, GMP synthetase, guanine monophosphate synthetase, chromosomal rearrangement; HET: XMP; 2.5A {Homo sapiens}
Probab=21.29 E-value=2.8e+02 Score=29.14 Aligned_cols=57 Identities=19% Similarity=0.130 Sum_probs=38.5
Q ss_pred ceEEEEEeCC-ch-hHHHHHhhhhcCCCCeEEEEEEeCCCCC---CCchHHHHHHHCCCCeEEeC
Q 018502 129 YKVAVLASKQ-EH-CLVDFLYGWQEGKLPVEITCVISNHDRG---PNSHVIRFLERHGIPYHYLC 188 (355)
Q Consensus 129 ~riavl~S~~-g~-~L~~ll~~~~~~~l~~eI~~Vis~~~~~---~~~~v~~~a~~~gIP~~~~~ 188 (355)
.|+++..||. .| .+..|+.+. -| +.++.+|..++.-. ....+.+.|++.|||+..++
T Consensus 241 ~~vvv~lSGGvDSsVla~Ll~~a-lG--~~~V~aV~vd~g~~~~~e~e~a~~~a~~lGI~~~vvd 302 (697)
T 2vxo_A 241 SKVLVLLSGGVDSTVCTALLNRA-LN--QEQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVIN 302 (697)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHH-SC--GGGEEEEEEECSCCCSSTTHHHHHHHHHTTCCEEEEE
T ss_pred cceEEEccCchHHHHHHHHHHHh-cC--CceEEEEEeccccCCcchHHHHHHHHHHhCCcEEEec
Confidence 6899999986 34 334444432 13 25788888876421 23468899999999998876
No 239
>3i1m_F 30S ribosomal protein S6; ribosome structure, protein-RNA complex, ribonucleoprotein, ribosomal protein, RNA-binding, rRNA-binding, antibiotic resistance; 3.19A {Escherichia coli k-12} PDB: 1p6g_F 1p87_F* 1vs7_F* 2avy_F 2aw7_F 1vs5_F 2i2u_F 2i2p_F* 2qan_F* 2qb9_F* 2qbb_F* 2qbd_F 2qbf_F 2qbh_F* 2qbj_F* 2qou_F* 2qow_F* 2qoy_F* 2qp0_F* 2vho_F ...
Probab=21.28 E-value=1e+02 Score=25.77 Aligned_cols=44 Identities=11% Similarity=0.143 Sum_probs=31.4
Q ss_pred CCccchHHHHHHHHHhcCCeEeEeeeec---------cCCCCeEEEEEEEEeCC
Q 018502 50 PDEVGIVAKLSECIASRGGNILAADVFV---------PEKKNVFYSRSEFIFDP 94 (355)
Q Consensus 50 pDr~GIVA~VS~~La~~g~NIld~~q~i---------d~~~g~F~Mr~~v~~~~ 94 (355)
.....+|..+.+.|.++||.|..+..-. ....|.|+ .|.|+.+.
T Consensus 16 e~v~~~ve~~~~~I~~~GG~I~~ve~wG~R~LAY~I~K~~~G~Y~-l~~f~a~~ 68 (135)
T 3i1m_F 16 EQVPGMIERYTAAITGAEGKIHRLEDWGRRQLAYPINKLHKAHYV-LMNVEAPQ 68 (135)
T ss_dssp TSHHHHHHHHHHHHHHTTCEECCCEEEEEECCSSCTTSSSCEEEE-ECCEECCT
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEEeeccccCceEcCCCCeEEEE-EEEEEeCH
Confidence 3456788999999999999999877643 12356555 66676654
No 240
>2pg3_A Queuosine biosynthesis protein QUEC; YP_049261.1, hypothetical protein, structural genomics, JOIN for structural genomics; 2.40A {Pectobacterium atrosepticum SCRI1043} SCOP: c.26.2.1
Probab=21.19 E-value=1.2e+02 Score=26.43 Aligned_cols=55 Identities=9% Similarity=0.082 Sum_probs=34.0
Q ss_pred ceEEEEEeCC-chh-HHHHHhhhhcCCCCeEEEEEEeCCCCCCC---chHHHHHHHCCCC-eEEeC
Q 018502 129 YKVAVLASKQ-EHC-LVDFLYGWQEGKLPVEITCVISNHDRGPN---SHVIRFLERHGIP-YHYLC 188 (355)
Q Consensus 129 ~riavl~S~~-g~~-L~~ll~~~~~~~l~~eI~~Vis~~~~~~~---~~v~~~a~~~gIP-~~~~~ 188 (355)
.|++|+.||. .|. +..++.. .+ .++.+|..++..... ..+.++|++.||| ++.++
T Consensus 3 ~kvvv~lSGG~DS~~~l~ll~~--~~---~~v~av~~~~g~~~~~e~~~a~~~a~~lgi~~~~vi~ 63 (232)
T 2pg3_A 3 KRAVVVFSGGQDSTTCLIQALQ--DY---DDVHCITFDYGQRHRAEIEVAQELSQKLGAAAHKVLD 63 (232)
T ss_dssp CEEEEECCSSHHHHHHHHHHHH--HC---SEEEEEEEESSSSCHHHHHHHHHHHHHHTCSEEEEEE
T ss_pred CCEEEEecCcHHHHHHHHHHHH--cC---CCEEEEEEECCCCCHHHHHHHHHHHHHhCCCceEEEe
Confidence 4899999986 343 2233322 23 467777666532111 2467889999999 87765
No 241
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=21.09 E-value=2.7e+02 Score=24.15 Aligned_cols=72 Identities=7% Similarity=-0.111 Sum_probs=39.3
Q ss_pred hHHHHHHHHHHHhhhhhccceeeeCCCCCCceEEEEEeCCchhHHHHHhhhhcCCCCeEEEEEEeCCCCC-CCchHHHHH
Q 018502 99 REQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRG-PNSHVIRFL 177 (355)
Q Consensus 99 ~~~L~~~l~~la~~lg~~~~~~~~~~~~~~~riavl~S~~g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~-~~~~v~~~a 177 (355)
..++.+.+++.+++.|. ++.++.+.....-...++.+.... ++ +||....+. ...+..+.+
T Consensus 17 ~~~~~~gi~~~a~~~g~--------------~~~~~~~~~~~~~~~~i~~l~~~~--vd--giii~~~~~~~~~~~~~~~ 78 (306)
T 8abp_A 17 FQTEWKFADKAGKDLGF--------------EVIKIAVPDGEKTLNAIDSLAASG--AK--GFVICTPDPKLGSAIVAKA 78 (306)
T ss_dssp HHHHHHHHHHHHHHHTE--------------EEEEEECCSHHHHHHHHHHHHHTT--CC--EEEEECSCGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCC--------------EEEEeCCCCHHHHHHHHHHHHHcC--CC--EEEEeCCCchhhHHHHHHH
Confidence 46777888888887764 344454433222233344433332 22 333322111 112456788
Q ss_pred HHCCCCeEEeC
Q 018502 178 ERHGIPYHYLC 188 (355)
Q Consensus 178 ~~~gIP~~~~~ 188 (355)
.+.|||+..++
T Consensus 79 ~~~~iPvV~~~ 89 (306)
T 8abp_A 79 RGYDMKVIAVD 89 (306)
T ss_dssp HHTTCEEEEES
T ss_pred HHCCCcEEEeC
Confidence 89999998877
No 242
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=21.04 E-value=1.5e+02 Score=26.96 Aligned_cols=47 Identities=9% Similarity=0.138 Sum_probs=27.1
Q ss_pred ceEEEEEeCC-chhHHHHHhhhhcCCCCeEEEEEEeCCCCCCCchHHHHHHHCCCC
Q 018502 129 YKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIP 183 (355)
Q Consensus 129 ~riavl~S~~-g~~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~~~v~~~a~~~gIP 183 (355)
+||+|++.|. |... ++..+... ..++++|+.... ....++++++|+|
T Consensus 1 ~~vgiiG~G~~g~~~--~~~~l~~~--~~~~vav~d~~~----~~~~~~~~~~g~~ 48 (332)
T 2glx_A 1 NRWGLIGASTIAREW--VIGAIRAT--GGEVVSMMSTSA----ERGAAYATENGIG 48 (332)
T ss_dssp CEEEEESCCHHHHHT--HHHHHHHT--TCEEEEEECSCH----HHHHHHHHHTTCS
T ss_pred CeEEEEcccHHHHHh--hhHHhhcC--CCeEEEEECCCH----HHHHHHHHHcCCC
Confidence 4889888754 2221 02222222 478888765432 2456778888887
No 243
>1d1q_A Tyrosine phosphatase (E.C.3.1.3.48); beta-alpha-beta, hydrolase; HET: 4NP; 1.70A {Saccharomyces cerevisiae} SCOP: c.44.1.1 PDB: 1d2a_A* 1d1p_A*
Probab=20.93 E-value=2.5e+02 Score=23.45 Aligned_cols=82 Identities=17% Similarity=0.212 Sum_probs=43.5
Q ss_pred CCceEEEEEeCCc--hhH-HHHHhhhhc-CCCC---eEE--EEEEeCCC-CCCCchHHHHHHHCCCCeEEeCCCCChhHH
Q 018502 127 PKYKVAVLASKQE--HCL-VDFLYGWQE-GKLP---VEI--TCVISNHD-RGPNSHVIRFLERHGIPYHYLCAKENEREE 196 (355)
Q Consensus 127 ~~~riavl~S~~g--~~L-~~ll~~~~~-~~l~---~eI--~~Vis~~~-~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~ 196 (355)
+++||.|+.+|+- |.+ +.++..... ..+. .+| .++-..|. .+.+....+.++++||++. ...+. ..++
T Consensus 6 ~~~~VLFVCtgN~cRSpmAEal~~~~~~~~gl~~~~~~v~SAGt~~~~~g~~~~p~a~~~l~~~Gid~s-~~ar~-l~~~ 83 (161)
T 1d1q_A 6 PKISVAFIALGNFCRSPMAEAIFKHEVEKANLENRFNKIDSFGTSNYHVGESPDHRTVSICKQHGVKIN-HKGKQ-IKTK 83 (161)
T ss_dssp CCEEEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEEEESSCTTBTCCCCHHHHHHHHHTTCCCC-CCBCB-CCGG
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHHHHHHcCCCCCeEEEEeccccCCcCCCCCCHHHHHHHHHcCcCCC-ceEeE-CCHH
Confidence 4578887777764 433 345544322 1222 333 33322122 2345578899999999986 32211 1111
Q ss_pred HHHHHhcCCCEEEEEeec
Q 018502 197 ELLELVQNTDFLVLARYM 214 (355)
Q Consensus 197 ~~~~~l~~~Dlivla~y~ 214 (355)
.+.++|+|+...-.
T Consensus 84 ----~~~~~DlIl~M~~~ 97 (161)
T 1d1q_A 84 ----HFDEYDYIIGMDES 97 (161)
T ss_dssp ----GGGTCSEEEESSHH
T ss_pred ----HHhhCCEEEEeCHH
Confidence 23379999876443
No 244
>1vl2_A Argininosuccinate synthase; TM1780, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics, ligase; 1.65A {Thermotoga maritima} SCOP: c.26.2.1 d.210.1.1
Probab=20.90 E-value=1.3e+02 Score=29.97 Aligned_cols=61 Identities=13% Similarity=0.136 Sum_probs=38.3
Q ss_pred CCCCCceEEEEEeCC-ch-hHHHHHhhhhcCCCCeEEEEEEeCCCCCCC-chHHHHHHHCCC-CeEEeCC
Q 018502 124 DIDPKYKVAVLASKQ-EH-CLVDFLYGWQEGKLPVEITCVISNHDRGPN-SHVIRFLERHGI-PYHYLCA 189 (355)
Q Consensus 124 ~~~~~~riavl~S~~-g~-~L~~ll~~~~~~~l~~eI~~Vis~~~~~~~-~~v~~~a~~~gI-P~~~~~~ 189 (355)
.-..|.||+|..||. .| .+..+|.. .| .+|.+|..+-..... ..+.+.|++.|| |++.++.
T Consensus 10 ~~~~~~KVVVA~SGGlDSSv~a~~Lke--~G---~eViavt~d~Gq~~Ele~A~~vA~~lGi~~~~VvDl 74 (421)
T 1vl2_A 10 HHHMKEKVVLAYSGGLDTSVILKWLCE--KG---FDVIAYVANVGQKDDFVAIKEKALKTGASKVYVEDL 74 (421)
T ss_dssp ----CCEEEEECCSSHHHHHHHHHHHH--TT---CEEEEEEEESSCCCCHHHHHHHHHHHTCSEEEEEEC
T ss_pred hccccCCEEEEeCCcHHHHHHHHHHHH--CC---CeEEEEEEEcCCHHHHHHHHHHHHHcCCceEEEEec
Confidence 345678999999987 33 33334432 24 788888766532212 367889999999 8887763
No 245
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=20.65 E-value=83 Score=30.83 Aligned_cols=24 Identities=17% Similarity=0.310 Sum_probs=17.6
Q ss_pred CCCCceEEEEEeCC-chhHHHHHhh
Q 018502 125 IDPKYKVAVLASKQ-EHCLVDFLYG 148 (355)
Q Consensus 125 ~~~~~riavl~S~~-g~~L~~ll~~ 148 (355)
.+++.||+|+++|. |+.|..+|..
T Consensus 31 ~~~p~KI~ViGaGsWGTALA~~la~ 55 (391)
T 4fgw_A 31 AEKPFKVTVIGSGNWGTTIAKVVAE 55 (391)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHH
T ss_pred cCCCCeEEEECcCHHHHHHHHHHHH
Confidence 45678999999988 6777776653
No 246
>3by5_A Cobalamin biosynthesis protein; structural genomics, unknown function; 2.52A {Agrobacterium tumefaciens str} SCOP: c.151.1.1
Probab=20.62 E-value=1.9e+02 Score=24.67 Aligned_cols=31 Identities=0% Similarity=0.052 Sum_probs=23.8
Q ss_pred EEEEEeCCCCCCCchHHHHHHHCCCCeEEeC
Q 018502 158 ITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (355)
Q Consensus 158 I~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~ 188 (355)
|.++.|-..+.....+.++|+++|+|+..++
T Consensus 41 v~~lATid~K~dE~gL~e~A~~lgvPl~~~~ 71 (155)
T 3by5_A 41 VDYLATAPLKADEAGLAEAAKGLSLSLEIVA 71 (155)
T ss_dssp CCEEEESSCCSCCHHHHHHHHHTTCCEEECC
T ss_pred eEEEEchhhhCCCHHHHHHHHHhCCCeEEEC
Confidence 7677776544334578999999999999875
No 247
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0
Probab=20.51 E-value=1.9e+02 Score=22.24 Aligned_cols=40 Identities=13% Similarity=0.120 Sum_probs=25.2
Q ss_pred HHHHHCCC-CeEEeCCCCChhHHHHHH-Hhc--CCCEEEEEeecc
Q 018502 175 RFLERHGI-PYHYLCAKENEREEELLE-LVQ--NTDFLVLARYMQ 215 (355)
Q Consensus 175 ~~a~~~gI-P~~~~~~~~~~~~~~~~~-~l~--~~Dlivla~y~~ 215 (355)
+.+++.|+ ++...-. .....+++.+ ..+ ++|++|+....+
T Consensus 76 ~~~~~~g~~~~~~~~~-~g~~~~~I~~~~a~~~~~dliV~G~~~~ 119 (146)
T 3s3t_A 76 QFVATTSAPNLKTEIS-YGIPKHTIEDYAKQHPEIDLIVLGATGT 119 (146)
T ss_dssp HHHTTSSCCCCEEEEE-EECHHHHHHHHHHHSTTCCEEEEESCCS
T ss_pred HHHHhcCCcceEEEEe-cCChHHHHHHHHHhhcCCCEEEECCCCC
Confidence 44556788 6543221 1234567888 775 899999987765
No 248
>2nz2_A Argininosuccinate synthase; amino-acid biosynthesis, aspartate, citrulline, ST genomics, structural genomics consortium, SGC, ligase; HET: CIR; 2.40A {Homo sapiens}
Probab=20.18 E-value=1.6e+02 Score=28.94 Aligned_cols=56 Identities=13% Similarity=0.085 Sum_probs=37.3
Q ss_pred CceEEEEEeCCc-h-hHHHHHhhhhcCCCCeEEEEEEeCCCCCC-CchHHHHHHHCCCC-eEEeC
Q 018502 128 KYKVAVLASKQE-H-CLVDFLYGWQEGKLPVEITCVISNHDRGP-NSHVIRFLERHGIP-YHYLC 188 (355)
Q Consensus 128 ~~riavl~S~~g-~-~L~~ll~~~~~~~l~~eI~~Vis~~~~~~-~~~v~~~a~~~gIP-~~~~~ 188 (355)
+.||++..||.- | .+..++.. . +.++.++..++.... -..+.+.|++.|+| ++.++
T Consensus 5 ~~kVvvalSGGlDSsvll~lL~e--~---G~eV~av~vd~g~~~e~e~a~~~A~~lGi~~~~vvd 64 (413)
T 2nz2_A 5 KGSVVLAYSGGLDTSCILVWLKE--Q---GYDVIAYLANIGQKEDFEEARKKALKLGAKKVFIED 64 (413)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHH--T---TEEEEEEEEESSCCCCHHHHHHHHHHHTCSEEEEEE
T ss_pred CCeEEEEEcChHHHHHHHHHHHH--c---CCEEEEEEEECCcHHHHHHHHHHHHHhCCCEEEEEe
Confidence 468999999863 3 34444432 2 478888877764322 24688899999999 66553
No 249
>3v7q_A Probable ribosomal protein YLXQ; L7AE superfamily, K-turn binding, K-turn RNA, hypothetical R protein, RNA binding protein; HET: CIT; 1.55A {Bacillus subtilis}
Probab=20.15 E-value=58 Score=25.47 Aligned_cols=19 Identities=16% Similarity=0.196 Sum_probs=15.3
Q ss_pred chHHHHHHHCCCCeEEeCC
Q 018502 171 SHVIRFLERHGIPYHYLCA 189 (355)
Q Consensus 171 ~~v~~~a~~~gIP~~~~~~ 189 (355)
..+..+|+.++||++.+.+
T Consensus 51 ~~i~~~c~~~~vp~~~~~s 69 (101)
T 3v7q_A 51 KKVTDKCNYYKVPYKKVES 69 (101)
T ss_dssp HHHHHHHHHTTCCEEEESC
T ss_pred hhhcccccccCCCeeeech
Confidence 3567789999999998853
Done!