Query 018506
Match_columns 355
No_of_seqs 226 out of 2215
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 16:19:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018506.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018506hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3obb_A Probable 3-hydroxyisobu 100.0 1.1E-56 3.7E-61 413.4 34.0 298 44-353 2-299 (300)
2 4gbj_A 6-phosphogluconate dehy 100.0 4E-52 1.4E-56 383.1 21.9 285 46-351 6-292 (297)
3 3doj_A AT3G25530, dehydrogenas 100.0 9.9E-48 3.4E-52 356.8 30.3 301 32-351 8-308 (310)
4 2h78_A Hibadh, 3-hydroxyisobut 100.0 9E-46 3.1E-50 342.5 34.0 297 44-352 2-298 (302)
5 4dll_A 2-hydroxy-3-oxopropiona 100.0 2.1E-46 7.2E-51 349.2 28.0 290 43-353 29-318 (320)
6 3pdu_A 3-hydroxyisobutyrate de 100.0 3.4E-46 1.2E-50 342.9 26.7 286 45-349 1-286 (287)
7 3g0o_A 3-hydroxyisobutyrate de 100.0 6.1E-46 2.1E-50 343.7 26.9 289 44-351 6-296 (303)
8 3pef_A 6-phosphogluconate dehy 100.0 1.5E-45 5.3E-50 338.5 26.5 285 46-349 2-286 (287)
9 3qha_A Putative oxidoreductase 100.0 1.6E-42 5.3E-47 319.7 28.7 269 45-339 15-294 (296)
10 3l6d_A Putative oxidoreductase 100.0 1.7E-43 5.7E-48 327.7 19.7 284 44-352 8-297 (306)
11 2gf2_A Hibadh, 3-hydroxyisobut 100.0 2.1E-41 7.1E-46 312.2 31.6 295 46-352 1-295 (296)
12 1vpd_A Tartronate semialdehyde 100.0 1E-39 3.4E-44 301.4 27.0 286 46-350 6-291 (299)
13 3cky_A 2-hydroxymethyl glutara 100.0 9.2E-39 3.1E-43 295.2 29.9 287 45-350 4-291 (301)
14 1yb4_A Tartronic semialdehyde 100.0 5.2E-39 1.8E-43 296.0 26.4 287 44-350 2-288 (295)
15 2uyy_A N-PAC protein; long-cha 100.0 1.2E-38 4.1E-43 296.5 27.2 285 45-348 30-314 (316)
16 4ezb_A Uncharacterized conserv 100.0 1.4E-39 4.8E-44 302.5 16.7 275 44-352 23-313 (317)
17 2cvz_A Dehydrogenase, 3-hydrox 100.0 2.6E-38 8.9E-43 290.4 21.7 281 45-350 1-282 (289)
18 3qsg_A NAD-binding phosphogluc 100.0 1.7E-38 5.8E-43 294.8 16.1 267 43-338 22-292 (312)
19 4e21_A 6-phosphogluconate dehy 100.0 6E-36 2.1E-40 281.4 22.4 280 43-353 20-355 (358)
20 4gwg_A 6-phosphogluconate dehy 100.0 1.5E-35 5.2E-40 287.5 20.7 266 43-331 2-293 (484)
21 2p4q_A 6-phosphogluconate dehy 100.0 6.4E-34 2.2E-38 278.4 21.8 258 45-325 10-291 (497)
22 4a7p_A UDP-glucose dehydrogena 100.0 2E-32 7E-37 263.7 27.9 261 44-331 7-304 (446)
23 2zyd_A 6-phosphogluconate dehy 100.0 1.5E-33 5.3E-38 275.0 19.3 260 42-324 12-295 (480)
24 3g79_A NDP-N-acetyl-D-galactos 100.0 1.8E-32 6.1E-37 265.6 21.6 263 43-330 16-331 (478)
25 3gg2_A Sugar dehydrogenase, UD 100.0 4.3E-31 1.5E-35 255.8 29.1 262 46-330 3-299 (450)
26 2iz1_A 6-phosphogluconate dehy 100.0 1E-31 3.5E-36 262.4 21.4 258 44-324 4-287 (474)
27 2pgd_A 6-phosphogluconate dehy 100.0 1E-31 3.5E-36 262.9 20.9 263 46-331 3-291 (482)
28 1i36_A Conserved hypothetical 100.0 4.8E-32 1.6E-36 245.5 16.6 255 46-340 1-258 (264)
29 3pid_A UDP-glucose 6-dehydroge 100.0 1E-30 3.6E-35 249.7 25.8 251 43-330 34-318 (432)
30 1pgj_A 6PGDH, 6-PGDH, 6-phosph 100.0 4.2E-31 1.4E-35 258.0 20.6 256 46-325 2-286 (478)
31 2o3j_A UDP-glucose 6-dehydroge 100.0 7.2E-30 2.5E-34 249.6 23.4 260 43-329 7-315 (481)
32 2y0c_A BCEC, UDP-glucose dehyd 100.0 1.3E-29 4.6E-34 247.0 22.9 262 44-331 7-310 (478)
33 3ojo_A CAP5O; rossmann fold, c 100.0 6.6E-30 2.3E-34 244.5 19.7 255 45-329 11-296 (431)
34 2q3e_A UDP-glucose 6-dehydroge 100.0 6.2E-30 2.1E-34 249.5 19.3 255 45-325 5-305 (467)
35 1mv8_A GMD, GDP-mannose 6-dehy 100.0 7.1E-29 2.4E-33 240.2 20.6 263 46-330 1-299 (436)
36 1dlj_A UDP-glucose dehydrogena 100.0 2.7E-28 9.1E-33 233.5 23.7 247 46-331 1-290 (402)
37 3vtf_A UDP-glucose 6-dehydroge 100.0 6.1E-27 2.1E-31 223.7 26.7 265 42-330 18-315 (444)
38 3k96_A Glycerol-3-phosphate de 100.0 5.2E-29 1.8E-33 234.3 11.3 299 35-353 19-353 (356)
39 2ew2_A 2-dehydropantoate 2-red 99.9 2.5E-26 8.6E-31 212.8 14.0 268 44-334 2-312 (316)
40 1evy_A Glycerol-3-phosphate de 99.9 1.4E-26 4.8E-31 219.4 8.2 298 33-350 2-344 (366)
41 1z82_A Glycerol-3-phosphate de 99.9 4.5E-25 1.6E-29 206.5 14.8 280 44-352 13-327 (335)
42 2qyt_A 2-dehydropantoate 2-red 99.9 9.3E-25 3.2E-29 202.6 10.1 260 44-331 7-314 (317)
43 1txg_A Glycerol-3-phosphate de 99.9 1.7E-23 5.7E-28 195.6 18.4 269 46-349 1-332 (335)
44 1ks9_A KPA reductase;, 2-dehyd 99.9 6.1E-25 2.1E-29 201.2 8.4 256 46-333 1-290 (291)
45 2ahr_A Putative pyrroline carb 99.9 3.3E-23 1.1E-27 186.8 18.9 250 44-333 2-258 (259)
46 1zej_A HBD-9, 3-hydroxyacyl-CO 99.9 2.4E-24 8.2E-29 196.5 9.8 190 45-270 12-212 (293)
47 1yqg_A Pyrroline-5-carboxylate 99.9 7.7E-24 2.6E-28 191.3 12.9 250 46-335 1-259 (263)
48 3dtt_A NADP oxidoreductase; st 99.9 2.9E-24 1E-28 192.2 8.8 188 42-238 16-232 (245)
49 1yj8_A Glycerol-3-phosphate de 99.9 5.3E-23 1.8E-27 195.4 14.9 281 45-351 21-368 (375)
50 2izz_A Pyrroline-5-carboxylate 99.9 3.7E-23 1.3E-27 192.4 13.3 263 42-339 19-295 (322)
51 1x0v_A GPD-C, GPDH-C, glycerol 99.9 1.1E-22 3.8E-27 191.6 16.3 282 43-351 6-350 (354)
52 2dpo_A L-gulonate 3-dehydrogen 99.9 6.1E-23 2.1E-27 189.9 14.2 267 42-346 3-300 (319)
53 3c24_A Putative oxidoreductase 99.9 1.4E-21 4.9E-26 178.7 13.8 201 45-266 11-232 (286)
54 3ghy_A Ketopantoate reductase 99.9 7.3E-21 2.5E-25 177.9 18.3 261 44-334 2-323 (335)
55 3d1l_A Putative NADP oxidoredu 99.9 7.2E-22 2.5E-26 178.7 10.7 202 45-268 10-216 (266)
56 3tri_A Pyrroline-5-carboxylate 99.9 2.7E-21 9.2E-26 176.2 12.7 255 44-335 2-269 (280)
57 3hwr_A 2-dehydropantoate 2-red 99.8 2.4E-20 8.2E-25 173.1 16.7 258 43-333 17-313 (318)
58 2rcy_A Pyrroline carboxylate r 99.8 1.2E-20 4E-25 170.3 14.1 248 43-335 2-261 (262)
59 3gt0_A Pyrroline-5-carboxylate 99.8 8.9E-20 3E-24 163.2 19.7 202 45-270 2-212 (247)
60 3hn2_A 2-dehydropantoate 2-red 99.8 3.3E-20 1.1E-24 171.7 15.6 264 45-337 2-308 (312)
61 1f0y_A HCDH, L-3-hydroxyacyl-C 99.8 2.6E-20 8.9E-25 171.6 13.3 193 44-266 14-240 (302)
62 3mog_A Probable 3-hydroxybutyr 99.8 2.5E-20 8.5E-25 181.5 13.3 191 44-266 4-224 (483)
63 3i83_A 2-dehydropantoate 2-red 99.8 7.2E-20 2.5E-24 170.1 14.9 253 45-334 2-304 (320)
64 1bg6_A N-(1-D-carboxylethyl)-L 99.8 4.4E-19 1.5E-23 167.1 20.4 267 44-335 3-333 (359)
65 3ggo_A Prephenate dehydrogenas 99.8 2.5E-19 8.6E-24 165.7 18.1 176 43-237 31-223 (314)
66 3k6j_A Protein F01G10.3, confi 99.8 1.2E-19 4.3E-24 174.3 14.6 191 42-263 51-267 (460)
67 2g5c_A Prephenate dehydrogenas 99.8 7.4E-19 2.5E-23 160.2 17.7 176 45-238 1-192 (281)
68 4e12_A Diketoreductase; oxidor 99.8 4.3E-19 1.5E-23 162.0 13.8 196 44-267 3-227 (283)
69 2f1k_A Prephenate dehydrogenas 99.8 2.6E-18 8.7E-23 156.4 16.9 195 46-264 1-210 (279)
70 4huj_A Uncharacterized protein 99.8 3.4E-19 1.2E-23 156.7 10.4 170 43-226 21-205 (220)
71 1jay_A Coenzyme F420H2:NADP+ o 99.8 1.1E-18 3.9E-23 152.2 12.1 173 46-238 1-200 (212)
72 2pv7_A T-protein [includes: ch 99.8 3.5E-18 1.2E-22 157.1 14.8 196 29-262 8-205 (298)
73 3ktd_A Prephenate dehydrogenas 99.8 2.7E-18 9.3E-23 159.9 14.1 175 44-237 7-205 (341)
74 3g17_A Similar to 2-dehydropan 99.8 1.6E-19 5.4E-24 165.8 4.4 259 45-334 2-286 (294)
75 1wdk_A Fatty oxidation complex 99.8 1.1E-18 3.8E-23 177.7 9.9 189 42-262 311-528 (715)
76 2wtb_A MFP2, fatty acid multif 99.8 6E-18 2.1E-22 172.4 14.7 252 42-342 309-589 (725)
77 4fgw_A Glycerol-3-phosphate de 99.7 3.3E-18 1.1E-22 161.0 10.3 270 44-329 33-371 (391)
78 2yjz_A Metalloreductase steap4 99.6 1.5E-19 5.1E-24 156.5 0.0 168 44-229 18-192 (201)
79 2vns_A Metalloreductase steap3 99.7 2.1E-17 7.3E-22 144.6 13.3 173 43-232 26-207 (215)
80 2i76_A Hypothetical protein; N 99.7 4.5E-18 1.5E-22 154.7 8.5 190 45-263 2-199 (276)
81 3b1f_A Putative prephenate deh 99.7 4.6E-17 1.6E-21 148.9 14.6 162 43-220 4-182 (290)
82 3ego_A Probable 2-dehydropanto 99.7 9E-19 3.1E-23 161.7 3.0 259 45-334 2-295 (307)
83 2raf_A Putative dinucleotide-b 99.7 9.9E-18 3.4E-22 146.1 9.2 157 43-236 17-193 (209)
84 1zcj_A Peroxisomal bifunctiona 99.7 2E-16 6.7E-21 153.8 14.8 191 42-263 34-250 (463)
85 3ado_A Lambda-crystallin; L-gu 99.7 3E-16 1E-20 144.2 10.7 200 43-270 4-232 (319)
86 3dfu_A Uncharacterized protein 99.6 1.3E-14 4.4E-19 127.1 11.6 155 44-248 5-160 (232)
87 1np3_A Ketol-acid reductoisome 99.5 3E-14 1E-18 133.0 12.6 193 44-258 15-223 (338)
88 3c7a_A Octopine dehydrogenase; 99.5 1.1E-13 3.6E-18 132.5 16.5 90 45-140 2-115 (404)
89 3zwc_A Peroxisomal bifunctiona 99.4 2.3E-12 7.8E-17 131.0 12.8 192 42-263 313-529 (742)
90 3gvx_A Glycerate dehydrogenase 99.3 1.1E-12 3.8E-17 119.1 6.8 117 32-157 109-225 (290)
91 2gcg_A Glyoxylate reductase/hy 99.3 3E-12 1E-16 119.0 9.6 111 42-157 152-262 (330)
92 2i99_A MU-crystallin homolog; 99.3 3.1E-14 1.1E-18 131.4 -4.9 134 44-198 134-280 (312)
93 2dc1_A L-aspartate dehydrogena 99.3 3.3E-13 1.1E-17 119.6 1.4 161 46-236 1-167 (236)
94 3hg7_A D-isomer specific 2-hyd 99.3 2.5E-12 8.6E-17 118.5 6.6 120 32-157 127-246 (324)
95 1wwk_A Phosphoglycerate dehydr 99.3 1.5E-11 5E-16 113.0 10.3 119 33-157 128-248 (307)
96 2ekl_A D-3-phosphoglycerate de 99.2 8.1E-12 2.8E-16 115.1 7.4 119 33-157 130-248 (313)
97 3gg9_A D-3-phosphoglycerate de 99.2 8.2E-12 2.8E-16 116.6 7.5 110 43-157 158-267 (352)
98 3fr7_A Putative ketol-acid red 99.2 4.8E-11 1.7E-15 113.7 12.7 202 42-264 50-283 (525)
99 3pp8_A Glyoxylate/hydroxypyruv 99.2 2.9E-12 9.8E-17 117.9 3.9 120 32-157 126-245 (315)
100 1qp8_A Formate dehydrogenase; 99.2 1E-11 3.5E-16 113.7 7.5 116 32-157 110-226 (303)
101 3jtm_A Formate dehydrogenase, 99.2 7.3E-12 2.5E-16 116.8 6.4 112 42-157 161-272 (351)
102 1gdh_A D-glycerate dehydrogena 99.2 1.4E-11 4.8E-16 113.8 8.1 111 42-157 143-254 (320)
103 2dbq_A Glyoxylate reductase; D 99.2 2.7E-11 9.1E-16 112.7 9.9 110 42-157 147-256 (334)
104 4e5n_A Thermostable phosphite 99.2 8.3E-12 2.8E-16 115.7 6.4 110 43-157 143-252 (330)
105 4dgs_A Dehydrogenase; structur 99.2 1.3E-11 4.3E-16 114.6 7.0 107 42-157 168-274 (340)
106 3evt_A Phosphoglycerate dehydr 99.2 5.4E-12 1.8E-16 116.5 4.4 121 31-157 122-243 (324)
107 2w2k_A D-mandelate dehydrogena 99.2 1.1E-11 3.7E-16 115.9 6.3 112 42-157 160-272 (348)
108 4g2n_A D-isomer specific 2-hyd 99.2 2E-11 6.7E-16 113.5 7.7 109 43-157 171-279 (345)
109 2g76_A 3-PGDH, D-3-phosphoglyc 99.2 3.6E-11 1.2E-15 111.5 9.3 120 32-157 150-271 (335)
110 2pi1_A D-lactate dehydrogenase 99.2 1.9E-11 6.4E-16 113.5 7.2 109 42-157 138-246 (334)
111 3ba1_A HPPR, hydroxyphenylpyru 99.2 1.2E-11 4.2E-16 114.6 5.8 107 42-157 161-267 (333)
112 2j6i_A Formate dehydrogenase; 99.2 2.3E-11 7.7E-16 114.3 7.4 112 42-157 161-273 (364)
113 2nac_A NAD-dependent formate d 99.2 2.3E-11 8E-16 114.8 7.4 112 42-157 188-299 (393)
114 1mx3_A CTBP1, C-terminal bindi 99.2 2.1E-11 7.3E-16 113.6 6.8 111 42-157 165-275 (347)
115 1ygy_A PGDH, D-3-phosphoglycer 99.1 9.8E-11 3.4E-15 115.4 10.2 120 32-157 127-248 (529)
116 2cuk_A Glycerate dehydrogenase 99.1 1.3E-10 4.5E-15 106.8 9.2 104 42-156 141-244 (311)
117 2d0i_A Dehydrogenase; structur 99.1 4.5E-11 1.5E-15 111.1 6.1 109 42-157 143-251 (333)
118 1j4a_A D-LDH, D-lactate dehydr 99.1 1E-10 3.5E-15 108.6 8.5 109 42-157 143-251 (333)
119 2yq5_A D-isomer specific 2-hyd 99.1 7.2E-11 2.5E-15 109.6 6.2 108 42-157 145-252 (343)
120 4hy3_A Phosphoglycerate oxidor 99.1 1.6E-10 5.3E-15 108.1 8.5 110 42-157 173-282 (365)
121 3k5p_A D-3-phosphoglycerate de 99.1 1.5E-10 5E-15 109.8 7.2 117 33-157 142-260 (416)
122 1sc6_A PGDH, D-3-phosphoglycer 99.1 1.3E-10 4.3E-15 110.5 6.2 117 33-157 131-249 (404)
123 3oet_A Erythronate-4-phosphate 99.0 1.6E-10 5.5E-15 108.3 4.8 106 43-157 117-226 (381)
124 1dxy_A D-2-hydroxyisocaproate 99.0 2.2E-10 7.6E-15 106.3 5.7 108 42-157 142-249 (333)
125 1xdw_A NAD+-dependent (R)-2-hy 99.0 2.9E-10 9.9E-15 105.5 5.8 108 42-157 143-250 (331)
126 2o4c_A Erythronate-4-phosphate 99.0 4.8E-10 1.6E-14 105.3 6.2 106 43-157 114-223 (380)
127 1hyh_A L-hicdh, L-2-hydroxyiso 98.9 3E-09 1E-13 97.9 10.0 68 45-113 1-81 (309)
128 3oj0_A Glutr, glutamyl-tRNA re 98.9 3.1E-09 1.1E-13 86.3 7.4 88 45-142 21-111 (144)
129 2rir_A Dipicolinate synthase, 98.9 3.5E-09 1.2E-13 96.9 8.2 95 43-146 155-251 (300)
130 2hk9_A Shikimate dehydrogenase 98.9 4.5E-09 1.5E-13 95.0 8.1 93 44-142 128-222 (275)
131 3uuw_A Putative oxidoreductase 98.8 2E-08 6.8E-13 92.2 11.3 107 43-157 4-115 (308)
132 3q2i_A Dehydrogenase; rossmann 98.8 2.7E-08 9.2E-13 93.1 11.6 111 38-156 6-123 (354)
133 2d5c_A AROE, shikimate 5-dehyd 98.8 1.2E-08 4.2E-13 91.5 8.5 98 47-155 118-218 (263)
134 2ewd_A Lactate dehydrogenase,; 98.8 7.3E-09 2.5E-13 95.6 6.8 93 45-144 4-124 (317)
135 1y81_A Conserved hypothetical 98.8 1E-08 3.4E-13 82.7 6.7 97 44-156 13-113 (138)
136 1a5z_A L-lactate dehydrogenase 98.8 9.4E-09 3.2E-13 94.9 6.8 67 46-113 1-79 (319)
137 1pzg_A LDH, lactate dehydrogen 98.7 2.3E-08 7.7E-13 92.7 8.3 66 44-109 8-86 (331)
138 3euw_A MYO-inositol dehydrogen 98.7 7.8E-08 2.7E-12 89.6 12.0 106 44-157 3-114 (344)
139 3rc1_A Sugar 3-ketoreductase; 98.7 5.5E-08 1.9E-12 90.9 10.5 108 42-157 24-138 (350)
140 3d4o_A Dipicolinate synthase s 98.7 3.5E-08 1.2E-12 89.9 8.9 94 43-145 153-248 (293)
141 4hkt_A Inositol 2-dehydrogenas 98.7 9E-08 3.1E-12 88.7 11.7 104 45-157 3-112 (331)
142 3e9m_A Oxidoreductase, GFO/IDH 98.7 8.5E-08 2.9E-12 88.9 11.4 107 43-157 3-116 (330)
143 1x7d_A Ornithine cyclodeaminas 98.7 3.2E-08 1.1E-12 92.3 8.3 103 44-155 128-239 (350)
144 3ic5_A Putative saccharopine d 98.7 2.8E-08 9.7E-13 77.1 6.7 102 44-155 4-113 (118)
145 3db2_A Putative NADPH-dependen 98.7 1E-07 3.5E-12 89.1 11.8 106 44-157 4-115 (354)
146 3c85_A Putative glutathione-re 98.7 6.4E-08 2.2E-12 81.7 9.4 78 43-120 37-124 (183)
147 1guz_A Malate dehydrogenase; o 98.7 6.6E-08 2.3E-12 88.8 9.5 66 46-112 1-80 (310)
148 3c1a_A Putative oxidoreductase 98.6 5.1E-08 1.7E-12 89.7 8.3 105 43-156 8-117 (315)
149 3fwz_A Inner membrane protein 98.6 1.9E-07 6.4E-12 75.3 10.6 75 44-118 6-88 (140)
150 2hjr_A Malate dehydrogenase; m 98.6 6.6E-08 2.3E-12 89.5 8.9 66 45-111 14-92 (328)
151 3llv_A Exopolyphosphatase-rela 98.6 1.4E-07 4.8E-12 76.0 9.8 69 44-112 5-81 (141)
152 1tlt_A Putative oxidoreductase 98.6 1.8E-07 6.3E-12 86.1 11.5 107 43-157 3-114 (319)
153 3ezy_A Dehydrogenase; structur 98.6 1.8E-07 6.2E-12 87.1 10.8 105 45-157 2-113 (344)
154 3e18_A Oxidoreductase; dehydro 98.6 3.7E-07 1.3E-11 85.6 13.0 106 43-156 3-113 (359)
155 1lss_A TRK system potassium up 98.6 1.4E-07 4.9E-12 75.4 8.6 69 45-113 4-81 (140)
156 3ec7_A Putative dehydrogenase; 98.6 2.4E-07 8.2E-12 86.8 11.0 106 43-156 21-135 (357)
157 3kb6_A D-lactate dehydrogenase 98.6 7E-08 2.4E-12 89.4 7.0 108 43-157 139-246 (334)
158 2ho3_A Oxidoreductase, GFO/IDH 98.6 3.3E-07 1.1E-11 84.6 11.7 104 45-156 1-110 (325)
159 3cea_A MYO-inositol 2-dehydrog 98.6 2.9E-07 1E-11 85.6 11.3 106 43-156 6-119 (346)
160 1omo_A Alanine dehydrogenase; 98.6 2.3E-07 7.8E-12 85.6 10.2 91 44-146 124-222 (322)
161 1lld_A L-lactate dehydrogenase 98.6 7E-08 2.4E-12 88.9 6.7 69 44-112 6-86 (319)
162 3h9u_A Adenosylhomocysteinase; 98.6 2.2E-07 7.7E-12 88.0 10.1 94 44-146 210-303 (436)
163 3mz0_A Inositol 2-dehydrogenas 98.6 3.4E-07 1.1E-11 85.3 11.3 104 45-156 2-114 (344)
164 2v6b_A L-LDH, L-lactate dehydr 98.6 1.1E-07 3.9E-12 87.0 7.8 67 46-112 1-78 (304)
165 1v8b_A Adenosylhomocysteinase; 98.6 1E-07 3.4E-12 91.9 7.7 110 35-153 247-357 (479)
166 2glx_A 1,5-anhydro-D-fructose 98.6 5.9E-07 2E-11 83.1 12.7 103 46-156 1-110 (332)
167 2duw_A Putative COA-binding pr 98.6 3E-08 1E-12 80.7 3.3 95 46-156 14-114 (145)
168 2g1u_A Hypothetical protein TM 98.5 1.1E-07 3.8E-12 78.1 6.8 76 43-118 17-101 (155)
169 1xea_A Oxidoreductase, GFO/IDH 98.5 4.1E-07 1.4E-11 83.9 10.9 104 45-156 2-111 (323)
170 2p2s_A Putative oxidoreductase 98.5 4.2E-07 1.4E-11 84.3 10.8 106 43-156 2-114 (336)
171 1t2d_A LDH-P, L-lactate dehydr 98.5 2E-07 6.9E-12 85.9 8.5 65 45-110 4-81 (322)
172 2z2v_A Hypothetical protein PH 98.5 1.1E-07 3.9E-12 89.1 6.5 103 43-156 14-122 (365)
173 1h6d_A Precursor form of gluco 98.5 5.9E-07 2E-11 86.3 11.4 110 39-156 77-198 (433)
174 3d64_A Adenosylhomocysteinase; 98.5 1.7E-07 5.7E-12 90.7 7.3 101 42-151 274-375 (494)
175 2egg_A AROE, shikimate 5-dehyd 98.5 1.9E-07 6.6E-12 85.1 7.3 104 44-155 140-252 (297)
176 3qy9_A DHPR, dihydrodipicolina 98.5 9E-07 3.1E-11 78.0 11.2 71 43-120 1-72 (243)
177 3m2t_A Probable dehydrogenase; 98.5 5.3E-07 1.8E-11 84.5 10.2 106 43-156 3-116 (359)
178 2nvw_A Galactose/lactose metab 98.5 7.9E-07 2.7E-11 86.5 11.7 115 38-156 32-162 (479)
179 1ur5_A Malate dehydrogenase; o 98.4 5.2E-07 1.8E-11 82.8 9.2 67 45-112 2-81 (309)
180 3hdj_A Probable ornithine cycl 98.4 5.2E-07 1.8E-11 82.8 9.0 91 44-147 120-219 (313)
181 3bio_A Oxidoreductase, GFO/IDH 98.4 6.1E-07 2.1E-11 82.1 9.4 101 43-156 7-114 (304)
182 4dio_A NAD(P) transhydrogenase 98.4 2.3E-07 7.9E-12 87.4 6.7 94 45-142 190-313 (405)
183 3evn_A Oxidoreductase, GFO/IDH 98.4 5.9E-07 2E-11 83.1 9.2 106 43-156 3-115 (329)
184 3p2y_A Alanine dehydrogenase/p 98.4 2.3E-07 7.8E-12 86.7 6.0 66 44-109 183-273 (381)
185 2hmt_A YUAA protein; RCK, KTN, 98.4 2.7E-07 9.2E-12 74.1 5.2 69 44-112 5-81 (144)
186 3ohs_X Trans-1,2-dihydrobenzen 98.4 1.7E-06 5.9E-11 80.1 11.4 104 45-156 2-114 (334)
187 3u62_A Shikimate dehydrogenase 98.4 2.7E-07 9.1E-12 82.1 5.5 90 47-143 110-202 (253)
188 1ydw_A AX110P-like protein; st 98.4 1.9E-06 6.5E-11 80.7 11.2 107 43-157 4-120 (362)
189 3p7m_A Malate dehydrogenase; p 98.4 1.1E-06 3.8E-11 80.8 9.4 70 43-112 3-84 (321)
190 3gvi_A Malate dehydrogenase; N 98.3 6.2E-07 2.1E-11 82.6 7.0 70 42-112 4-86 (324)
191 3don_A Shikimate dehydrogenase 98.3 3.7E-07 1.3E-11 82.2 5.4 96 44-146 116-215 (277)
192 3ce6_A Adenosylhomocysteinase; 98.3 1.2E-06 4.1E-11 84.9 9.2 92 44-145 273-365 (494)
193 3d0o_A L-LDH 1, L-lactate dehy 98.3 1.9E-06 6.7E-11 79.2 9.8 70 43-112 4-85 (317)
194 1ldn_A L-lactate dehydrogenase 98.3 1.3E-06 4.5E-11 80.3 8.3 70 43-112 4-85 (316)
195 1u8x_X Maltose-6'-phosphate gl 98.3 7.9E-07 2.7E-11 85.9 7.0 68 45-112 28-113 (472)
196 3l4b_C TRKA K+ channel protien 98.3 1.1E-06 3.8E-11 76.2 7.3 68 46-113 1-77 (218)
197 2i6t_A Ubiquitin-conjugating e 98.3 7.4E-07 2.5E-11 81.4 5.9 65 44-109 13-85 (303)
198 1y6j_A L-lactate dehydrogenase 98.3 2E-06 6.7E-11 79.2 8.7 70 44-113 6-86 (318)
199 1oju_A MDH, malate dehydrogena 98.3 9.2E-07 3.2E-11 80.3 6.2 66 46-112 1-80 (294)
200 2ixa_A Alpha-N-acetylgalactosa 98.3 4.2E-06 1.4E-10 80.6 11.2 107 42-156 17-139 (444)
201 3e82_A Putative oxidoreductase 98.3 4.4E-06 1.5E-10 78.3 11.1 104 43-156 5-115 (364)
202 2vhw_A Alanine dehydrogenase; 98.3 3.5E-06 1.2E-10 79.4 10.3 70 43-112 166-242 (377)
203 3v5n_A Oxidoreductase; structu 98.2 6.1E-06 2.1E-10 78.8 11.7 106 43-156 35-158 (417)
204 3dty_A Oxidoreductase, GFO/IDH 98.2 5E-06 1.7E-10 78.9 11.0 108 42-157 9-134 (398)
205 1f06_A MESO-diaminopimelate D- 98.2 1.3E-06 4.4E-11 80.6 6.6 74 43-119 1-76 (320)
206 3btv_A Galactose/lactose metab 98.2 2.8E-06 9.5E-11 81.8 9.2 109 44-156 19-143 (438)
207 3u3x_A Oxidoreductase; structu 98.2 7.3E-06 2.5E-10 76.7 11.7 106 43-156 24-136 (361)
208 3pqe_A L-LDH, L-lactate dehydr 98.2 1.4E-06 4.9E-11 80.2 6.6 69 44-112 4-84 (326)
209 1obb_A Maltase, alpha-glucosid 98.2 1.3E-06 4.3E-11 84.5 6.4 69 44-112 2-88 (480)
210 3kux_A Putative oxidoreductase 98.2 6.9E-06 2.3E-10 76.6 11.3 105 44-157 6-116 (352)
211 3upl_A Oxidoreductase; rossman 98.2 1.1E-05 3.8E-10 76.9 12.6 70 44-113 22-119 (446)
212 3f4l_A Putative oxidoreductase 98.2 1.9E-06 6.6E-11 80.2 7.2 104 45-157 2-114 (345)
213 1zh8_A Oxidoreductase; TM0312, 98.2 6.1E-06 2.1E-10 76.6 10.6 110 39-156 12-130 (340)
214 3n58_A Adenosylhomocysteinase; 98.2 3.2E-06 1.1E-10 80.1 8.5 92 44-145 246-338 (464)
215 3moi_A Probable dehydrogenase; 98.2 6.2E-06 2.1E-10 78.0 10.6 105 45-157 2-113 (387)
216 3gvp_A Adenosylhomocysteinase 98.2 3.6E-06 1.2E-10 79.5 8.7 93 44-146 219-312 (435)
217 3fef_A Putative glucosidase LP 98.2 1.3E-06 4.3E-11 83.8 5.6 68 43-111 3-85 (450)
218 3abi_A Putative uncharacterize 98.1 2.8E-06 9.5E-11 79.7 6.8 70 42-112 13-88 (365)
219 4had_A Probable oxidoreductase 98.1 5.5E-06 1.9E-10 77.1 8.6 106 43-156 21-134 (350)
220 1iuk_A Hypothetical protein TT 98.1 1.6E-06 5.4E-11 69.9 3.7 71 46-121 14-89 (140)
221 3nep_X Malate dehydrogenase; h 98.1 3.2E-06 1.1E-10 77.4 6.3 67 46-112 1-80 (314)
222 2zqz_A L-LDH, L-lactate dehydr 98.1 9.2E-06 3.1E-10 74.9 9.0 70 43-112 7-87 (326)
223 3fi9_A Malate dehydrogenase; s 98.1 8.6E-06 2.9E-10 75.4 8.6 70 42-111 5-86 (343)
224 1leh_A Leucine dehydrogenase; 98.1 7E-06 2.4E-10 76.6 8.0 67 43-110 171-239 (364)
225 3gdo_A Uncharacterized oxidore 98.1 1.4E-05 4.7E-10 74.7 10.0 105 43-156 3-113 (358)
226 1x13_A NAD(P) transhydrogenase 98.1 9.1E-06 3.1E-10 77.1 8.8 65 45-109 172-263 (401)
227 1s6y_A 6-phospho-beta-glucosid 98.1 4.5E-06 1.6E-10 80.2 6.7 68 45-112 7-94 (450)
228 3o8q_A Shikimate 5-dehydrogena 98.1 1.8E-06 6.2E-11 77.9 3.6 95 44-144 125-224 (281)
229 2eez_A Alanine dehydrogenase; 98.1 1.2E-05 4.2E-10 75.5 9.4 70 43-112 164-240 (369)
230 3tl2_A Malate dehydrogenase; c 98.1 8.4E-06 2.9E-10 74.7 8.0 69 44-112 7-89 (315)
231 1id1_A Putative potassium chan 98.0 1.3E-05 4.3E-10 65.4 8.1 70 44-113 2-83 (153)
232 3fhl_A Putative oxidoreductase 98.0 1.3E-05 4.3E-10 75.1 9.1 104 43-156 3-113 (362)
233 3phh_A Shikimate dehydrogenase 98.0 3.8E-06 1.3E-10 75.1 4.7 92 45-144 118-212 (269)
234 1gpj_A Glutamyl-tRNA reductase 98.0 7.5E-06 2.6E-10 77.9 7.0 70 44-113 166-239 (404)
235 4gmf_A Yersiniabactin biosynth 98.0 7.5E-06 2.6E-10 76.8 6.8 104 44-157 6-117 (372)
236 3vku_A L-LDH, L-lactate dehydr 98.0 8.6E-06 2.9E-10 74.9 7.0 70 43-112 7-87 (326)
237 1ez4_A Lactate dehydrogenase; 98.0 1.3E-05 4.3E-10 73.7 8.1 68 45-112 5-83 (318)
238 1nyt_A Shikimate 5-dehydrogena 98.0 1.8E-05 6.1E-10 71.0 8.6 94 44-144 118-217 (271)
239 2d59_A Hypothetical protein PH 98.0 4.6E-06 1.6E-10 67.5 4.2 71 45-121 22-96 (144)
240 1mld_A Malate dehydrogenase; o 98.0 1.9E-05 6.7E-10 72.3 8.4 67 46-112 1-79 (314)
241 3l9w_A Glutathione-regulated p 97.9 4E-05 1.4E-09 72.9 10.5 76 44-119 3-86 (413)
242 3ulk_A Ketol-acid reductoisome 97.9 3.1E-05 1.1E-09 72.8 9.3 83 43-127 35-123 (491)
243 1l7d_A Nicotinamide nucleotide 97.9 3.1E-05 1E-09 73.1 9.5 66 44-109 171-265 (384)
244 3i23_A Oxidoreductase, GFO/IDH 97.9 1.6E-05 5.4E-10 74.0 7.4 102 45-156 2-113 (349)
245 2d4a_B Malate dehydrogenase; a 97.9 1.4E-05 4.9E-10 73.0 6.7 65 47-112 1-78 (308)
246 2xxj_A L-LDH, L-lactate dehydr 97.9 1.4E-05 4.7E-10 73.2 6.4 67 46-112 1-78 (310)
247 3ldh_A Lactate dehydrogenase; 97.9 9.2E-06 3.2E-10 74.7 5.3 68 44-112 20-100 (330)
248 4ew6_A D-galactose-1-dehydroge 97.9 3.6E-05 1.2E-09 71.1 9.0 106 38-157 18-130 (330)
249 4f3y_A DHPR, dihydrodipicolina 97.9 2.7E-05 9.3E-10 69.7 7.7 76 43-119 5-90 (272)
250 3e8x_A Putative NAD-dependent 97.9 3.9E-05 1.3E-09 66.9 8.7 70 40-109 16-92 (236)
251 3oqb_A Oxidoreductase; structu 97.9 5.3E-05 1.8E-09 71.3 10.1 106 43-156 4-131 (383)
252 1p77_A Shikimate 5-dehydrogena 97.9 1E-05 3.6E-10 72.6 4.8 96 44-146 118-219 (272)
253 3pwz_A Shikimate dehydrogenase 97.9 3.1E-05 1.1E-09 69.4 7.8 94 44-144 119-218 (272)
254 4fb5_A Probable oxidoreductase 97.8 3.2E-05 1.1E-09 72.8 8.2 106 43-156 23-142 (393)
255 1smk_A Malate dehydrogenase, g 97.8 2.5E-05 8.4E-10 72.1 6.7 69 44-112 7-87 (326)
256 2b0j_A 5,10-methenyltetrahydro 97.8 0.00063 2.1E-08 59.9 14.7 114 88-218 128-242 (358)
257 3oa2_A WBPB; oxidoreductase, s 97.8 7E-05 2.4E-09 68.8 9.3 104 44-156 2-121 (318)
258 1lc0_A Biliverdin reductase A; 97.8 5.1E-05 1.7E-09 68.9 8.3 103 42-157 4-114 (294)
259 1pjc_A Protein (L-alanine dehy 97.8 4.7E-05 1.6E-09 71.2 8.2 68 45-112 167-241 (361)
260 4aj2_A L-lactate dehydrogenase 97.8 3.3E-05 1.1E-09 71.1 7.0 68 42-110 16-96 (331)
261 2nu8_A Succinyl-COA ligase [AD 97.8 2.9E-05 1E-09 70.2 6.4 105 43-157 5-113 (288)
262 1npy_A Hypothetical shikimate 97.8 2.6E-05 9E-10 69.9 6.0 66 45-112 119-186 (271)
263 3o9z_A Lipopolysaccaride biosy 97.8 8.2E-05 2.8E-09 68.1 9.3 104 44-156 2-120 (312)
264 4h3v_A Oxidoreductase domain p 97.8 3.1E-05 1.1E-09 72.7 6.6 104 43-154 4-121 (390)
265 1ff9_A Saccharopine reductase; 97.8 3.3E-05 1.1E-09 74.4 6.8 69 44-112 2-79 (450)
266 1edz_A 5,10-methylenetetrahydr 97.8 3.1E-05 1.1E-09 70.6 6.2 92 42-144 174-278 (320)
267 4gqa_A NAD binding oxidoreduct 97.7 4.5E-05 1.6E-09 72.6 7.1 104 45-156 26-144 (412)
268 3ond_A Adenosylhomocysteinase; 97.7 0.00011 3.8E-09 70.7 8.7 91 44-144 264-355 (488)
269 2axq_A Saccharopine dehydrogen 97.7 4.8E-05 1.6E-09 73.5 6.3 96 43-147 21-125 (467)
270 3jyo_A Quinate/shikimate dehyd 97.7 7.9E-05 2.7E-09 67.2 7.3 97 44-145 126-233 (283)
271 2x0j_A Malate dehydrogenase; o 97.7 5.6E-05 1.9E-09 68.4 6.2 64 46-109 1-77 (294)
272 3qvo_A NMRA family protein; st 97.7 2.7E-05 9.3E-10 68.1 4.0 71 40-110 18-97 (236)
273 2vt3_A REX, redox-sensing tran 97.6 1.5E-05 5.3E-10 68.7 2.2 69 44-112 84-156 (215)
274 3ijp_A DHPR, dihydrodipicolina 97.6 0.00016 5.5E-09 65.0 8.6 102 44-154 20-133 (288)
275 4g65_A TRK system potassium up 97.6 4.3E-05 1.5E-09 73.8 5.1 69 44-112 2-79 (461)
276 3ngx_A Bifunctional protein fo 97.6 0.00015 5.3E-09 64.3 8.2 76 44-144 149-225 (276)
277 1nvm_B Acetaldehyde dehydrogen 97.6 0.00012 4.1E-09 66.9 7.3 74 44-117 3-87 (312)
278 3eag_A UDP-N-acetylmuramate:L- 97.6 0.00012 4.1E-09 67.4 7.4 65 44-108 3-73 (326)
279 1dih_A Dihydrodipicolinate red 97.6 6.1E-05 2.1E-09 67.5 5.2 76 43-119 3-89 (273)
280 1j5p_A Aspartate dehydrogenase 97.6 5.5E-05 1.9E-09 66.6 4.6 82 44-143 11-93 (253)
281 3ius_A Uncharacterized conserv 97.5 9.4E-05 3.2E-09 66.3 6.1 65 44-110 4-72 (286)
282 3ip3_A Oxidoreductase, putativ 97.5 8E-05 2.8E-09 68.8 5.5 104 45-157 2-116 (337)
283 3r6d_A NAD-dependent epimerase 97.5 0.00014 4.7E-09 62.7 6.5 42 44-85 3-48 (221)
284 2czc_A Glyceraldehyde-3-phosph 97.5 0.00032 1.1E-08 64.7 9.2 73 45-117 2-95 (334)
285 3fbt_A Chorismate mutase and s 97.5 5.6E-05 1.9E-09 68.0 3.9 67 44-112 121-189 (282)
286 4ina_A Saccharopine dehydrogen 97.5 0.00014 4.7E-09 69.1 6.7 68 45-112 1-87 (405)
287 4a26_A Putative C-1-tetrahydro 97.5 0.00018 6E-09 64.8 6.9 76 44-144 164-242 (300)
288 3h2s_A Putative NADH-flavin re 97.5 0.00029 9.8E-09 60.6 8.1 66 46-111 1-72 (224)
289 1oi7_A Succinyl-COA synthetase 97.5 0.00018 6.3E-09 64.9 6.9 103 44-156 6-112 (288)
290 2aef_A Calcium-gated potassium 97.5 8.9E-05 3E-09 64.7 4.7 68 44-113 8-83 (234)
291 1b0a_A Protein (fold bifunctio 97.4 0.00038 1.3E-08 62.2 8.3 76 43-143 157-233 (288)
292 1cf2_P Protein (glyceraldehyde 97.4 0.0003 1E-08 65.0 7.9 70 45-114 1-91 (337)
293 1xyg_A Putative N-acetyl-gamma 97.4 0.00034 1.1E-08 65.2 8.1 91 43-144 14-115 (359)
294 3ew7_A LMO0794 protein; Q8Y8U8 97.4 0.00039 1.3E-08 59.4 8.1 65 46-111 1-71 (221)
295 1o6z_A MDH, malate dehydrogena 97.4 0.00037 1.3E-08 63.4 8.3 65 46-110 1-79 (303)
296 1a4i_A Methylenetetrahydrofola 97.4 0.00047 1.6E-08 62.0 8.5 77 43-144 163-240 (301)
297 3l07_A Bifunctional protein fo 97.4 0.0005 1.7E-08 61.4 8.5 76 44-144 160-236 (285)
298 1vl6_A Malate oxidoreductase; 97.4 0.00077 2.6E-08 62.8 10.0 95 43-146 190-299 (388)
299 2c2x_A Methylenetetrahydrofola 97.4 0.00044 1.5E-08 61.6 7.9 76 43-143 156-234 (281)
300 3tnl_A Shikimate dehydrogenase 97.4 0.00027 9.3E-09 64.5 6.7 69 44-112 153-237 (315)
301 3p2o_A Bifunctional protein fo 97.3 0.00064 2.2E-08 60.7 8.7 77 43-144 158-235 (285)
302 1jw9_B Molybdopterin biosynthe 97.3 0.00038 1.3E-08 61.5 7.1 34 45-78 31-65 (249)
303 1b8p_A Protein (malate dehydro 97.3 0.00062 2.1E-08 62.7 8.6 67 44-110 4-92 (329)
304 3ing_A Homoserine dehydrogenas 97.3 0.00039 1.3E-08 63.8 6.7 70 43-112 2-93 (325)
305 1hdo_A Biliverdin IX beta redu 97.3 0.00028 9.5E-09 59.6 5.3 37 46-82 4-41 (206)
306 3t4e_A Quinate/shikimate dehyd 97.3 0.00046 1.6E-08 62.9 7.0 69 44-112 147-231 (312)
307 2yv1_A Succinyl-COA ligase [AD 97.3 0.00034 1.2E-08 63.3 6.1 103 44-157 12-119 (294)
308 3mtj_A Homoserine dehydrogenas 97.3 0.00073 2.5E-08 64.5 8.6 67 44-111 9-88 (444)
309 4a5o_A Bifunctional protein fo 97.2 0.00092 3.1E-08 59.7 8.4 76 44-144 160-236 (286)
310 2yv2_A Succinyl-COA synthetase 97.2 0.0013 4.5E-08 59.6 9.5 103 44-157 12-120 (297)
311 3i6i_A Putative leucoanthocyan 97.2 0.00052 1.8E-08 63.4 7.0 69 43-111 8-93 (346)
312 3gpi_A NAD-dependent epimerase 97.2 0.00021 7.2E-09 64.1 4.2 67 43-109 1-71 (286)
313 3hhp_A Malate dehydrogenase; M 97.2 0.00053 1.8E-08 62.6 6.8 67 46-112 1-80 (312)
314 1p9l_A Dihydrodipicolinate red 97.2 0.0046 1.6E-07 54.2 12.6 58 46-119 1-62 (245)
315 2nqt_A N-acetyl-gamma-glutamyl 97.2 0.00025 8.6E-09 65.8 4.6 91 44-145 8-114 (352)
316 3dhn_A NAD-dependent epimerase 97.2 0.00025 8.5E-09 61.2 4.3 66 45-110 4-76 (227)
317 1nvt_A Shikimate 5'-dehydrogen 97.2 0.00016 5.6E-09 65.3 3.1 94 44-144 127-233 (287)
318 1b7g_O Protein (glyceraldehyde 97.1 0.0017 5.8E-08 60.0 9.5 69 45-113 1-89 (340)
319 3dr3_A N-acetyl-gamma-glutamyl 97.1 0.00054 1.8E-08 63.2 5.7 92 44-144 3-109 (337)
320 2r6j_A Eugenol synthase 1; phe 97.1 0.0008 2.7E-08 61.2 6.8 66 46-111 12-89 (318)
321 1c1d_A L-phenylalanine dehydro 97.1 0.0015 5.1E-08 60.5 8.5 65 43-108 173-238 (355)
322 2ozp_A N-acetyl-gamma-glutamyl 97.0 0.001 3.5E-08 61.6 7.2 90 44-144 3-102 (345)
323 2ejw_A HDH, homoserine dehydro 97.0 0.00019 6.5E-09 66.1 1.9 71 44-117 2-82 (332)
324 3u95_A Glycoside hydrolase, fa 97.0 0.0004 1.4E-08 67.2 4.0 64 46-109 1-84 (477)
325 1qyc_A Phenylcoumaran benzylic 97.0 0.0012 4E-08 59.6 6.9 67 45-111 4-87 (308)
326 3lk7_A UDP-N-acetylmuramoylala 97.0 0.0033 1.1E-07 60.4 10.3 65 44-108 8-79 (451)
327 3dqp_A Oxidoreductase YLBE; al 97.0 0.00041 1.4E-08 59.5 3.5 37 46-82 1-38 (219)
328 3slg_A PBGP3 protein; structur 97.0 0.00066 2.3E-08 63.2 5.2 68 42-109 21-99 (372)
329 1ys4_A Aspartate-semialdehyde 96.9 0.00083 2.8E-08 62.5 5.5 90 45-143 8-116 (354)
330 3keo_A Redox-sensing transcrip 96.9 0.0002 6.8E-09 61.4 1.0 74 44-119 83-165 (212)
331 1qyd_A Pinoresinol-lariciresin 96.9 0.0015 5.2E-08 59.0 6.8 67 45-111 4-86 (313)
332 2gas_A Isoflavone reductase; N 96.9 0.0013 4.5E-08 59.3 6.3 67 45-111 2-86 (307)
333 2yyy_A Glyceraldehyde-3-phosph 96.9 0.0059 2E-07 56.4 10.6 69 45-113 2-93 (343)
334 2dt5_A AT-rich DNA-binding pro 96.9 0.00016 5.6E-09 62.1 0.1 69 44-112 79-151 (211)
335 2x4g_A Nucleoside-diphosphate- 96.9 0.0011 3.7E-08 60.8 5.6 67 44-110 12-86 (342)
336 1xq6_A Unknown protein; struct 96.9 0.0023 7.9E-08 55.7 7.5 67 43-110 2-78 (253)
337 3e48_A Putative nucleoside-dip 96.9 0.0011 3.8E-08 59.3 5.5 65 46-110 1-74 (289)
338 1lnq_A MTHK channels, potassiu 96.8 0.00053 1.8E-08 63.2 3.2 67 45-113 115-189 (336)
339 3c1o_A Eugenol synthase; pheny 96.8 0.0018 6.2E-08 58.8 6.7 68 44-111 3-87 (321)
340 3do5_A HOM, homoserine dehydro 96.8 0.0024 8.3E-08 58.6 7.3 69 45-113 2-92 (327)
341 1y1p_A ARII, aldehyde reductas 96.7 0.0043 1.5E-07 56.6 8.6 42 43-84 9-51 (342)
342 3m2p_A UDP-N-acetylglucosamine 96.7 0.0019 6.5E-08 58.4 6.1 64 45-110 2-71 (311)
343 1y7t_A Malate dehydrogenase; N 96.7 0.0019 6.5E-08 59.3 6.0 65 45-109 4-88 (327)
344 2fp4_A Succinyl-COA ligase [GD 96.7 0.0016 5.4E-08 59.3 5.3 103 45-157 13-120 (305)
345 4h7p_A Malate dehydrogenase; s 96.7 0.0028 9.5E-08 58.5 7.0 67 43-109 22-108 (345)
346 1up7_A 6-phospho-beta-glucosid 96.7 0.0028 9.6E-08 60.1 7.2 67 45-111 2-83 (417)
347 2c5a_A GDP-mannose-3', 5'-epim 96.6 0.0024 8.1E-08 59.7 6.1 67 43-109 27-101 (379)
348 1hye_A L-lactate/malate dehydr 96.6 0.0016 5.4E-08 59.5 4.6 64 46-109 1-82 (313)
349 3ff4_A Uncharacterized protein 96.6 0.0014 4.8E-08 51.1 3.6 72 44-122 3-78 (122)
350 1lu9_A Methylene tetrahydromet 96.6 0.0039 1.3E-07 56.1 7.0 43 44-86 118-161 (287)
351 5mdh_A Malate dehydrogenase; o 96.5 0.0024 8E-08 58.8 5.3 65 45-109 3-87 (333)
352 3dfz_A SIRC, precorrin-2 dehyd 96.5 0.007 2.4E-07 52.3 7.9 73 44-118 30-107 (223)
353 1u8f_O GAPDH, glyceraldehyde-3 96.5 0.0093 3.2E-07 54.9 9.2 70 45-114 3-104 (335)
354 2wm3_A NMRA-like family domain 96.5 0.0046 1.6E-07 55.5 7.0 66 45-110 5-81 (299)
355 2r00_A Aspartate-semialdehyde 96.5 0.00063 2.2E-08 62.8 1.1 91 44-144 2-99 (336)
356 4hb9_A Similarities with proba 96.5 0.0021 7.3E-08 60.1 4.7 35 45-79 1-35 (412)
357 1ebf_A Homoserine dehydrogenas 96.5 0.0018 6.2E-08 60.2 4.1 55 44-101 3-64 (358)
358 1zud_1 Adenylyltransferase THI 96.5 0.0054 1.9E-07 54.1 6.9 34 45-78 28-62 (251)
359 2jl1_A Triphenylmethane reduct 96.4 0.0026 8.8E-08 56.7 4.7 65 46-110 1-75 (287)
360 3c8m_A Homoserine dehydrogenas 96.4 0.0035 1.2E-07 57.6 5.7 69 44-112 5-97 (331)
361 3guy_A Short-chain dehydrogena 96.4 0.016 5.4E-07 49.9 9.5 66 47-122 3-69 (230)
362 3tum_A Shikimate dehydrogenase 96.4 0.0048 1.7E-07 54.9 6.2 68 44-111 124-197 (269)
363 2bka_A CC3, TAT-interacting pr 96.3 0.0016 5.5E-08 56.5 2.7 38 44-81 17-57 (242)
364 2hjs_A USG-1 protein homolog; 96.3 0.0014 4.8E-08 60.6 2.2 90 45-144 6-102 (340)
365 2ep5_A 350AA long hypothetical 96.3 0.0039 1.3E-07 57.8 5.3 90 44-143 3-110 (350)
366 3oh8_A Nucleoside-diphosphate 96.3 0.0026 9E-08 62.2 4.2 63 45-110 147-210 (516)
367 1xgk_A Nitrogen metabolite rep 96.3 0.0078 2.7E-07 55.7 7.3 67 45-111 5-83 (352)
368 2pzm_A Putative nucleotide sug 96.3 0.0028 9.6E-08 57.9 4.2 42 39-80 14-56 (330)
369 3h8v_A Ubiquitin-like modifier 96.3 0.0095 3.2E-07 53.6 7.5 42 44-85 35-77 (292)
370 4hv4_A UDP-N-acetylmuramate--L 96.2 0.006 2E-07 59.3 6.5 65 44-108 21-88 (494)
371 3kkj_A Amine oxidase, flavin-c 96.2 0.0042 1.4E-07 53.6 4.8 33 46-78 3-35 (336)
372 4id9_A Short-chain dehydrogena 96.2 0.0031 1E-07 57.9 3.9 67 42-109 16-85 (347)
373 3ruf_A WBGU; rossmann fold, UD 96.2 0.0096 3.3E-07 54.6 7.3 67 44-110 24-109 (351)
374 3ftp_A 3-oxoacyl-[acyl-carrier 96.1 0.014 4.8E-07 51.8 8.0 40 46-85 28-69 (270)
375 4gx0_A TRKA domain protein; me 96.1 0.0042 1.4E-07 61.4 4.9 67 46-112 349-419 (565)
376 2q1w_A Putative nucleotide sug 96.1 0.0046 1.6E-07 56.5 4.7 42 38-79 14-56 (333)
377 2ydy_A Methionine adenosyltran 96.1 0.0075 2.6E-07 54.4 6.0 65 45-110 2-69 (315)
378 3rkr_A Short chain oxidoreduct 96.1 0.0097 3.3E-07 52.5 6.5 42 44-85 28-70 (262)
379 3hn7_A UDP-N-acetylmuramate-L- 96.1 0.0095 3.3E-07 58.3 6.9 65 44-108 18-87 (524)
380 4gx0_A TRKA domain protein; me 96.0 0.014 5E-07 57.5 8.2 66 44-109 126-200 (565)
381 3e5r_O PP38, glyceraldehyde-3- 96.0 0.016 5.3E-07 53.4 7.8 40 45-84 3-46 (337)
382 2c07_A 3-oxoacyl-(acyl-carrier 96.0 0.012 4.2E-07 52.5 7.1 71 15-85 14-85 (285)
383 4b4o_A Epimerase family protei 96.0 0.0053 1.8E-07 55.1 4.6 58 46-109 1-59 (298)
384 2zcu_A Uncharacterized oxidore 96.0 0.0062 2.1E-07 54.1 4.9 64 47-110 1-74 (286)
385 1sb8_A WBPP; epimerase, 4-epim 95.9 0.014 4.7E-07 53.7 7.2 68 43-110 25-111 (352)
386 2gn4_A FLAA1 protein, UDP-GLCN 95.9 0.017 5.7E-07 53.2 7.7 67 44-110 20-100 (344)
387 3pwk_A Aspartate-semialdehyde 95.9 0.0019 6.3E-08 60.2 1.1 91 45-144 2-98 (366)
388 7mdh_A Protein (malate dehydro 95.9 0.0087 3E-07 55.7 5.7 65 45-109 32-116 (375)
389 4dpk_A Malonyl-COA/succinyl-CO 95.9 0.0093 3.2E-07 55.4 5.9 91 44-144 6-113 (359)
390 4dpl_A Malonyl-COA/succinyl-CO 95.9 0.0093 3.2E-07 55.4 5.9 91 44-144 6-113 (359)
391 3rp8_A Flavoprotein monooxygen 95.9 0.0066 2.3E-07 57.1 5.0 37 43-79 21-57 (407)
392 3ged_A Short-chain dehydrogena 95.9 0.015 5.2E-07 51.0 6.8 42 46-87 2-45 (247)
393 3f1l_A Uncharacterized oxidore 95.9 0.033 1.1E-06 48.7 9.1 40 46-85 13-53 (252)
394 3hsk_A Aspartate-semialdehyde 95.9 0.0038 1.3E-07 58.4 2.9 93 43-144 17-127 (381)
395 3uko_A Alcohol dehydrogenase c 95.8 0.029 9.9E-07 52.3 9.0 75 45-119 194-281 (378)
396 4fn4_A Short chain dehydrogena 95.8 0.013 4.6E-07 51.6 6.2 68 46-122 7-78 (254)
397 3rd5_A Mypaa.01249.C; ssgcid, 95.8 0.045 1.5E-06 48.9 9.8 53 34-86 5-58 (291)
398 2a9f_A Putative malic enzyme ( 95.8 0.011 3.6E-07 55.2 5.6 97 41-146 184-294 (398)
399 1p3d_A UDP-N-acetylmuramate--a 95.8 0.016 5.4E-07 56.0 7.0 64 44-108 17-84 (475)
400 2bll_A Protein YFBG; decarboxy 95.8 0.02 7E-07 52.1 7.5 64 46-109 1-75 (345)
401 3tfo_A Putative 3-oxoacyl-(acy 95.7 0.016 5.5E-07 51.3 6.5 41 46-86 4-46 (264)
402 3r1i_A Short-chain type dehydr 95.7 0.017 6E-07 51.4 6.7 40 46-85 33-73 (276)
403 2f00_A UDP-N-acetylmuramate--L 95.7 0.017 6E-07 55.9 7.2 64 44-108 18-85 (491)
404 3nrc_A Enoyl-[acyl-carrier-pro 95.7 0.021 7.2E-07 50.8 7.2 53 34-86 15-72 (280)
405 3ucx_A Short chain dehydrogena 95.7 0.02 6.8E-07 50.5 6.9 41 46-86 12-53 (264)
406 1vkn_A N-acetyl-gamma-glutamyl 95.7 0.046 1.6E-06 50.4 9.4 89 44-144 12-110 (351)
407 2d8a_A PH0655, probable L-thre 95.7 0.027 9.3E-07 51.8 8.0 45 45-89 168-213 (348)
408 3two_A Mannitol dehydrogenase; 95.7 0.014 4.6E-07 53.9 5.9 76 45-120 177-253 (348)
409 3sju_A Keto reductase; short-c 95.6 0.015 5.1E-07 51.8 5.9 40 46-85 24-65 (279)
410 3h2z_A Mannitol-1-phosphate 5- 95.6 0.021 7.3E-07 53.3 7.1 73 46-119 1-96 (382)
411 2dvm_A Malic enzyme, 439AA lon 95.6 0.016 5.3E-07 55.2 6.2 93 44-145 185-300 (439)
412 1e3i_A Alcohol dehydrogenase, 95.6 0.054 1.8E-06 50.4 9.8 46 45-90 196-242 (376)
413 1e6u_A GDP-fucose synthetase; 95.6 0.014 4.7E-07 52.8 5.4 60 44-110 2-64 (321)
414 1xg5_A ARPG836; short chain de 95.6 0.037 1.3E-06 49.1 8.2 43 43-85 30-73 (279)
415 2c29_D Dihydroflavonol 4-reduc 95.5 0.035 1.2E-06 50.6 8.2 66 44-109 4-85 (337)
416 2x5o_A UDP-N-acetylmuramoylala 95.5 0.01 3.5E-07 56.7 4.7 65 44-109 4-72 (439)
417 1p0f_A NADP-dependent alcohol 95.5 0.048 1.7E-06 50.6 9.2 75 45-119 192-279 (373)
418 2nwq_A Probable short-chain de 95.5 0.036 1.2E-06 49.2 8.0 82 47-143 22-107 (272)
419 3dii_A Short-chain dehydrogena 95.5 0.031 1.1E-06 48.7 7.4 40 47-86 4-44 (247)
420 3st7_A Capsular polysaccharide 95.5 0.011 3.9E-07 54.7 4.8 52 46-109 1-54 (369)
421 3enk_A UDP-glucose 4-epimerase 95.5 0.016 5.4E-07 52.9 5.7 37 44-80 4-41 (341)
422 2iz1_A 6-phosphogluconate dehy 95.5 0.11 3.6E-06 50.2 11.6 128 221-352 317-455 (474)
423 3ko8_A NAD-dependent epimerase 95.5 0.011 3.8E-07 53.2 4.4 37 46-82 1-38 (312)
424 1orr_A CDP-tyvelose-2-epimeras 95.5 0.028 9.6E-07 51.2 7.3 33 45-77 1-34 (347)
425 1rjw_A ADH-HT, alcohol dehydro 95.5 0.042 1.4E-06 50.4 8.4 45 45-89 165-209 (339)
426 2z1m_A GDP-D-mannose dehydrata 95.4 0.013 4.5E-07 53.3 4.9 37 44-80 2-39 (345)
427 2rh8_A Anthocyanidin reductase 95.4 0.018 6.3E-07 52.4 5.9 65 45-109 9-88 (338)
428 2p4q_A 6-phosphogluconate dehy 95.4 0.13 4.6E-06 49.7 12.0 128 221-352 322-460 (497)
429 1cdo_A Alcohol dehydrogenase; 95.4 0.064 2.2E-06 49.8 9.5 46 45-90 193-239 (374)
430 4g81_D Putative hexonate dehyd 95.4 0.016 5.5E-07 51.1 5.1 40 46-85 9-50 (255)
431 3grp_A 3-oxoacyl-(acyl carrier 95.4 0.037 1.3E-06 48.9 7.5 40 46-85 28-68 (266)
432 2jhf_A Alcohol dehydrogenase E 95.4 0.051 1.8E-06 50.5 8.8 46 45-90 192-238 (374)
433 2q1s_A Putative nucleotide sug 95.4 0.011 3.9E-07 54.9 4.2 68 43-110 30-108 (377)
434 1yb1_A 17-beta-hydroxysteroid 95.4 0.044 1.5E-06 48.4 8.0 43 43-85 29-72 (272)
435 4dyv_A Short-chain dehydrogena 95.4 0.025 8.7E-07 50.2 6.3 41 46-86 28-70 (272)
436 1t4b_A Aspartate-semialdehyde 95.4 0.0092 3.1E-07 55.6 3.5 91 45-143 1-100 (367)
437 2xdo_A TETX2 protein; tetracyc 95.3 0.016 5.4E-07 54.4 5.2 36 44-79 25-60 (398)
438 3cps_A Glyceraldehyde 3-phosph 95.3 0.032 1.1E-06 51.5 7.1 33 43-75 15-48 (354)
439 1oc2_A DTDP-glucose 4,6-dehydr 95.3 0.016 5.5E-07 53.0 5.1 34 45-78 4-40 (348)
440 3qiv_A Short-chain dehydrogena 95.3 0.054 1.9E-06 47.1 8.3 41 46-86 10-51 (253)
441 2qrj_A Saccharopine dehydrogen 95.3 0.0096 3.3E-07 55.7 3.4 85 45-143 214-302 (394)
442 2c20_A UDP-glucose 4-epimerase 95.3 0.0082 2.8E-07 54.5 2.9 65 45-110 1-76 (330)
443 3rui_A Ubiquitin-like modifier 95.3 0.022 7.4E-07 52.3 5.7 35 44-78 33-68 (340)
444 1rkx_A CDP-glucose-4,6-dehydra 95.3 0.014 4.7E-07 53.7 4.5 67 44-110 8-89 (357)
445 4fgs_A Probable dehydrogenase 95.3 0.03 1E-06 49.9 6.5 41 46-86 29-71 (273)
446 2zyd_A 6-phosphogluconate dehy 95.3 0.099 3.4E-06 50.4 10.7 128 221-352 325-463 (480)
447 1fmc_A 7 alpha-hydroxysteroid 95.2 0.035 1.2E-06 48.3 6.8 42 44-85 10-52 (255)
448 1hdc_A 3-alpha, 20 beta-hydrox 95.2 0.058 2E-06 47.1 8.3 43 44-86 4-47 (254)
449 3h5n_A MCCB protein; ubiquitin 95.2 0.038 1.3E-06 51.1 7.3 41 45-85 118-159 (353)
450 3sc6_A DTDP-4-dehydrorhamnose 95.2 0.014 4.6E-07 52.0 3.9 56 46-109 6-64 (287)
451 1n7h_A GDP-D-mannose-4,6-dehyd 95.2 0.0073 2.5E-07 56.2 2.2 35 46-80 29-64 (381)
452 3p19_A BFPVVD8, putative blue 95.2 0.021 7.3E-07 50.5 5.2 39 46-84 16-56 (266)
453 1n2s_A DTDP-4-, DTDP-glucose o 95.1 0.013 4.5E-07 52.3 3.9 60 46-110 1-63 (299)
454 1e3j_A NADP(H)-dependent ketos 95.1 0.065 2.2E-06 49.3 8.6 46 45-90 169-214 (352)
455 2dkn_A 3-alpha-hydroxysteroid 95.1 0.0049 1.7E-07 53.7 0.9 35 46-80 2-37 (255)
456 3vps_A TUNA, NAD-dependent epi 95.1 0.02 6.8E-07 51.6 5.0 37 43-79 5-42 (321)
457 1pl8_A Human sorbitol dehydrog 95.1 0.099 3.4E-06 48.2 9.8 46 45-90 172-218 (356)
458 3ihm_A Styrene monooxygenase A 95.1 0.017 5.9E-07 54.9 4.7 33 46-78 23-55 (430)
459 3alj_A 2-methyl-3-hydroxypyrid 95.1 0.02 6.8E-07 53.3 4.9 37 43-79 9-45 (379)
460 2fzw_A Alcohol dehydrogenase c 95.1 0.067 2.3E-06 49.7 8.5 46 45-90 191-237 (373)
461 3s2e_A Zinc-containing alcohol 95.0 0.074 2.5E-06 48.7 8.7 46 45-90 167-212 (340)
462 2bi7_A UDP-galactopyranose mut 95.0 0.021 7.2E-07 53.4 5.0 35 44-78 2-36 (384)
463 3n74_A 3-ketoacyl-(acyl-carrie 95.0 0.062 2.1E-06 47.0 7.8 41 46-86 10-51 (261)
464 2yy7_A L-threonine dehydrogena 95.0 0.012 4.1E-07 52.9 3.1 35 46-80 3-40 (312)
465 4b4u_A Bifunctional protein fo 95.0 0.085 2.9E-06 47.3 8.5 76 44-144 178-254 (303)
466 1yvv_A Amine oxidase, flavin-c 95.0 0.021 7.3E-07 51.7 4.9 33 46-78 3-35 (336)
467 2ywl_A Thioredoxin reductase r 95.0 0.026 8.8E-07 46.4 4.9 34 45-78 1-34 (180)
468 1geg_A Acetoin reductase; SDR 95.0 0.046 1.6E-06 47.8 6.8 39 47-85 4-43 (256)
469 2o7s_A DHQ-SDH PR, bifunctiona 95.0 0.024 8.4E-07 55.4 5.5 42 45-86 364-405 (523)
470 2h6e_A ADH-4, D-arabinose 1-de 95.0 0.046 1.6E-06 50.2 7.1 46 45-90 171-218 (344)
471 2hcy_A Alcohol dehydrogenase 1 94.9 0.082 2.8E-06 48.5 8.7 45 45-89 170-215 (347)
472 3rft_A Uronate dehydrogenase; 94.9 0.0059 2E-07 54.0 0.9 37 44-80 2-39 (267)
473 1yqd_A Sinapyl alcohol dehydro 94.9 0.027 9.4E-07 52.3 5.5 45 45-89 188-233 (366)
474 1y8q_A Ubiquitin-like 1 activa 94.9 0.068 2.3E-06 49.3 8.0 35 44-78 35-70 (346)
475 3gaf_A 7-alpha-hydroxysteroid 94.9 0.048 1.6E-06 47.8 6.7 39 47-85 13-53 (256)
476 3qj4_A Renalase; FAD/NAD(P)-bi 94.9 0.017 5.8E-07 52.9 3.9 34 45-78 1-37 (342)
477 3tzq_B Short-chain type dehydr 94.9 0.045 1.5E-06 48.4 6.6 39 47-85 13-52 (271)
478 1uuf_A YAHK, zinc-type alcohol 94.9 0.028 9.5E-07 52.3 5.4 75 45-119 195-275 (369)
479 3lyl_A 3-oxoacyl-(acyl-carrier 94.9 0.053 1.8E-06 47.0 6.9 41 46-86 6-47 (247)
480 3ay3_A NAD-dependent epimerase 94.8 0.004 1.4E-07 55.0 -0.5 35 45-79 2-37 (267)
481 1nff_A Putative oxidoreductase 94.8 0.065 2.2E-06 47.1 7.4 40 46-85 8-48 (260)
482 2rhc_B Actinorhodin polyketide 94.8 0.086 2.9E-06 46.7 8.3 40 46-85 23-63 (277)
483 4e3z_A Putative oxidoreductase 94.8 0.048 1.6E-06 48.2 6.5 42 44-85 24-68 (272)
484 4e6p_A Probable sorbitol dehyd 94.8 0.07 2.4E-06 46.7 7.6 41 46-86 9-50 (259)
485 3lf2_A Short chain oxidoreduct 94.8 0.11 3.8E-06 45.6 8.9 40 46-85 9-49 (265)
486 3asu_A Short-chain dehydrogena 94.8 0.13 4.6E-06 44.7 9.3 79 48-143 3-84 (248)
487 2ehd_A Oxidoreductase, oxidore 94.8 0.076 2.6E-06 45.5 7.6 41 46-86 6-47 (234)
488 3o38_A Short chain dehydrogena 94.8 0.044 1.5E-06 48.2 6.2 42 44-85 21-64 (266)
489 3afn_B Carbonyl reductase; alp 94.8 0.039 1.3E-06 48.0 5.8 41 44-84 6-48 (258)
490 4da9_A Short-chain dehydrogena 94.8 0.11 3.8E-06 46.1 8.9 40 46-85 29-71 (280)
491 2vou_A 2,6-dihydroxypyridine h 94.8 0.03 1E-06 52.4 5.3 36 44-79 4-39 (397)
492 1kyq_A Met8P, siroheme biosynt 94.8 0.02 7E-07 50.9 3.9 35 44-78 12-46 (274)
493 1ryi_A Glycine oxidase; flavop 94.7 0.026 8.8E-07 52.3 4.7 34 45-78 17-50 (382)
494 1ek6_A UDP-galactose 4-epimera 94.7 0.055 1.9E-06 49.3 7.0 33 45-77 2-35 (348)
495 4dgk_A Phytoene dehydrogenase; 94.7 0.025 8.4E-07 54.6 4.7 34 45-78 1-34 (501)
496 2hun_A 336AA long hypothetical 94.7 0.026 8.9E-07 51.3 4.7 35 44-78 2-39 (336)
497 4ibo_A Gluconate dehydrogenase 94.7 0.035 1.2E-06 49.2 5.4 39 47-85 27-67 (271)
498 3itj_A Thioredoxin reductase 1 94.7 0.021 7.3E-07 51.6 4.0 35 44-78 21-55 (338)
499 4ej6_A Putative zinc-binding d 94.7 0.09 3.1E-06 48.8 8.4 45 45-89 183-228 (370)
500 3gvc_A Oxidoreductase, probabl 94.7 0.066 2.3E-06 47.6 7.2 40 47-86 30-71 (277)
No 1
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=100.00 E-value=1.1e-56 Score=413.44 Aligned_cols=298 Identities=43% Similarity=0.705 Sum_probs=279.1
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHHHHhcCCC
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNGPN 123 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl~~~~ 123 (355)
.|+||||||+|+||.+||++|.++||+|++|||++++++.+.+.|+..++|+.|+++.+|+||+|+|+++++++|+....
T Consensus 2 ~M~kIgfIGlG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~~a~s~~e~~~~~dvv~~~l~~~~~v~~V~~~~~ 81 (300)
T 3obb_A 2 HMKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDD 81 (300)
T ss_dssp -CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSS
T ss_pred CcCEEEEeeehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHcCCEEcCCHHHHHhcCCceeecCCchHHHHHHHhchh
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred ccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCceEEeCCCCCChHHHhcCceEEEecCCHHHHHHH
Q 018506 124 GLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAA 203 (355)
Q Consensus 124 ~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~pv~g~~~~~~~g~~~~~~gg~~~~~~~v 203 (355)
++++.. .++++|||+||++|.+++++.+.+.+ . |++|+|+|++|++..+..|++++|+||++++++++
T Consensus 82 g~~~~~--~~g~iiId~sT~~p~~~~~~a~~~~~------~----G~~~lDaPVsGg~~~A~~G~L~imvGG~~~~~~~~ 149 (300)
T 3obb_A 82 GLLAHI--APGTLVLECSTIAPTSARKIHAAARE------R----GLAMLDAPVSGGTAGAAAGTLTFMVGGDAEALEKA 149 (300)
T ss_dssp SSTTSC--CC-CEEEECSCCCHHHHHHHHHHHHT------T----TCEEEECCEESCHHHHHHTCEEEEEESCHHHHHHH
T ss_pred hhhhcC--CCCCEEEECCCCCHHHHHHHHHHHHH------c----CCEEEecCCCCCHHHHHhCCEEEEEeCCHHHHHHH
Confidence 887763 36789999999999999999998864 2 38999999999999999999999999999999999
Q ss_pred HHHHHHcCCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcCCCcccccCCCCCCCccc
Q 018506 204 KPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCWSSDSYNPVPGVME 283 (355)
Q Consensus 204 ~~ll~~~g~~~~~~g~~g~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gi~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 283 (355)
+++|+.++++++|+|+.|+|+.+|+++|.+.+.++++++|++.++++.|+|++.++++++.+.+.+|..+.+.|.+....
T Consensus 150 ~p~l~~~g~~i~~~G~~G~g~~~Kl~~N~l~~~~~~a~aEa~~la~~~Gld~~~~~~vl~~~~~~s~~~~~~~p~~~~~~ 229 (300)
T 3obb_A 150 RPLFEAMGRNIFHAGPDGAGQVAKVCNNQLLAVLMIGTAEAMALGVANGLEAKVLAEIMRRSSGGNWALEVYNPWPGVME 229 (300)
T ss_dssp HHHHHHHEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSTTCCHHHHHCCCSTTTST
T ss_pred HHHHHHhCCCEEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHhCcccchHHHhhccccchhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999998888888777766
Q ss_pred CCCCCCCCCCCcchhhHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHCCCCCCcHHHHHHHHhcCCC
Q 018506 284 GVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENGHDSKDFSCVFQHYYGGKD 353 (355)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~gv~~pi~~~~~~~~~~~~~~g~g~~d~~~~~~~~~~~~~ 353 (355)
..+..++|.++|.++.+.||++++++++++.|+++|+.+.+.++|+++.++|+|++||++++++|.+..+
T Consensus 230 ~~~~~~~~~~~f~~~l~~KDl~l~~~~A~~~g~~~p~~~~a~~~~~~a~~~G~g~~D~sal~~~~e~~~G 299 (300)
T 3obb_A 230 NAPASRDYSGGFMAQLMAKDLGLAQEAAQASASSTPMGSLALSLYRLLLKQGYAERDFSVVQKLFDPTQG 299 (300)
T ss_dssp TSGGGGTTCSSSBHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHTTCTTSBGGGGHHHHCTTC-
T ss_pred hccccccCCccchHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHhCCCCCcCHHHHHHHHHHhcC
Confidence 6677889999999999999999999999999999999999999999999999999999999998876544
No 2
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=100.00 E-value=4e-52 Score=383.08 Aligned_cols=285 Identities=23% Similarity=0.361 Sum_probs=253.0
Q ss_pred ceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHHHHhcCCCcc
Q 018506 46 ESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNGPNGL 125 (355)
Q Consensus 46 mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl~~~~~~ 125 (355)
.||||||+|+||.+||++|+++||+|++|||++++++++.+.|+..++|+.|+++.+|+||+|+|++.++++++... +
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~~dvvi~~l~~~~~~~~v~~~~--~ 83 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTASKAEPLTKLGATVVENAIDAITPGGIVFSVLADDAAVEELFSME--L 83 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEC-------CTTTTTTCEECSSGGGGCCTTCEEEECCSSHHHHHHHSCHH--H
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCeEeCCHHHHHhcCCceeeeccchhhHHHHHHHH--H
Confidence 58999999999999999999999999999999999999999999999999999999999999999998888876432 3
Q ss_pred ccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCceEEeCCCCCChHHHhcCceEEEecCCHHHHHHHHH
Q 018506 126 LQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAAKP 205 (355)
Q Consensus 126 l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~pv~g~~~~~~~g~~~~~~gg~~~~~~~v~~ 205 (355)
+.. ..++.++||+||++|.+.+++.+.+.+. +++|+|+|++|++..+..|++++|+||+++.++++++
T Consensus 84 ~~~--~~~~~iiid~sT~~p~~~~~~~~~~~~~----------g~~~ldapVsGg~~~a~~g~l~im~gG~~~~~~~~~~ 151 (297)
T 4gbj_A 84 VEK--LGKDGVHVSMSTISPETSRQLAQVHEWY----------GAHYVGAPIFARPEAVRAKVGNICLSGNAGAKERIKP 151 (297)
T ss_dssp HHH--HCTTCEEEECSCCCHHHHHHHHHHHHHT----------TCEEEECCEECCHHHHHHTCCEEEEEECHHHHHHHHH
T ss_pred Hhh--cCCCeEEEECCCCChHHHHHHHHHHHhc----------CCceecCCcCCCccccccccceeecccchhHHHHHHH
Confidence 332 2356799999999999999999988642 3899999999999999999999999999999999999
Q ss_pred HHHHcCCCeEEeCC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcCCCcccccCCCCCCCcccC
Q 018506 206 LFLSMGKNTIYCGG-AGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCWSSDSYNPVPGVMEG 284 (355)
Q Consensus 206 ll~~~g~~~~~~g~-~g~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gi~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 284 (355)
+|+.++++++|+|+ +|+|+.+|+++|.+.+.++++++|++.++++.|+|+++++++++.+.+.+|..+.+.+
T Consensus 152 ~l~~~g~~i~~~g~~~G~g~~~Kl~~N~~~~~~~~~~aEa~~la~~~Gld~~~~~~~l~~~~~~s~~~~~~~~------- 224 (297)
T 4gbj_A 152 IVENFVKGVFDFGDDPGAANVIKLAGNFMIACSLEMMGEAFTMAEKNGISRQSIYEMLTSTLFAAPIFQNYGK------- 224 (297)
T ss_dssp HHHTTCSEEEECCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTTTCSHHHHHHHH-------
T ss_pred HHHHhhCCeEEecCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhcccCchhhccCc-------
Confidence 99999999999985 8999999999999999999999999999999999999999999999988887654432
Q ss_pred CCCCCCCCC-CcchhhHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHCCCCCCcHHHHHHHHhcC
Q 018506 285 VPASRNYGG-GFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENGHDSKDFSCVFQHYYGG 351 (355)
Q Consensus 285 ~~~~~~~~~-~~~~~~~~kd~~~~~~~a~~~gv~~pi~~~~~~~~~~~~~~g~g~~d~~~~~~~~~~~ 351 (355)
.+..++|.| +|+++.+.||++++++++++.|+|+|+.+.+.++|+.+.++|+|++||+++++.+.+.
T Consensus 225 ~~~~~~~~p~~f~~~l~~KDl~l~~~~A~~~g~~~p~~~~~~~~~~~a~~~G~g~~D~sal~~~~~~~ 292 (297)
T 4gbj_A 225 LVASNTYEPVAFRFPLGLKDINLTLQTASDVNAPMPFADIIRNRFISGLAKGRENLDWGALALGASDD 292 (297)
T ss_dssp HHHHTCCCSCSSBHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTTCTTSBGGGGGHHHHHH
T ss_pred cccCCCCCCccchhHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHH
Confidence 234568886 8999999999999999999999999999999999999999999999999999988754
No 3
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=100.00 E-value=9.9e-48 Score=356.75 Aligned_cols=301 Identities=30% Similarity=0.419 Sum_probs=262.1
Q ss_pred cccccCCCCCCCCCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCC
Q 018506 32 MRRFFSSQVPSCQFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPS 111 (355)
Q Consensus 32 ~~~~~~~~~~~~~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~ 111 (355)
.+.|...+.....||||+|||+|.||.+||.+|+++||+|++|||++++++.+.+.|+..++++.++++++|+||+|+|+
T Consensus 8 ~~~~~~~~~~~~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~~~~~~aDvvi~~vp~ 87 (310)
T 3doj_A 8 HHHSSGLVPRGSHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASVCESPAEVIKKCKYTIAMLSD 87 (310)
T ss_dssp ----------CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSS
T ss_pred cccccccCcccccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeEcCCHHHHHHhCCEEEEEcCC
Confidence 34455555556778999999999999999999999999999999999999999999998899999999999999999999
Q ss_pred chHHHHHhcCCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCceEEeCCCCCChHHHhcCceEE
Q 018506 112 SSHVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTF 191 (355)
Q Consensus 112 ~~~~~~vl~~~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~pv~g~~~~~~~g~~~~ 191 (355)
+.++++++....+++.. ..++++|||+||+.|...+.+.+.+.+ . +.+|+++|++|++..+..+++++
T Consensus 88 ~~~~~~v~~~~~~l~~~--l~~g~~vv~~st~~~~~~~~~~~~~~~------~----g~~~v~~pv~g~~~~a~~g~l~i 155 (310)
T 3doj_A 88 PCAALSVVFDKGGVLEQ--ICEGKGYIDMSTVDAETSLKINEAITG------K----GGRFVEGPVSGSKKPAEDGQLII 155 (310)
T ss_dssp HHHHHHHHHSTTCGGGG--CCTTCEEEECSCCCHHHHHHHHHHHHH------T----TCEEEECCEECCHHHHHHTCEEE
T ss_pred HHHHHHHHhCchhhhhc--cCCCCEEEECCCCCHHHHHHHHHHHHH------c----CCEEEeCCCCCChhHHhcCCeEE
Confidence 88999998443334433 236689999999999999998887754 1 27899999999999999999999
Q ss_pred EecCCHHHHHHHHHHHHHcCCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcCCCccc
Q 018506 192 MVGGSEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCWS 271 (355)
Q Consensus 192 ~~gg~~~~~~~v~~ll~~~g~~~~~~g~~g~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gi~~~~~~~~~~~~~~~s~~ 271 (355)
++||+++.++.++++|+.+|++++++++.|.+.++|+++|.+.+.++++++|++.++++.|+|++++.+++..+...+|.
T Consensus 156 ~~gg~~~~~~~~~~ll~~~g~~~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~~~~~~~s~~ 235 (310)
T 3doj_A 156 LAAGDKALFEESIPAFDVLGKRSFYLGQVGNGAKMKLIVNMIMGSMMNAFSEGLVLADKSGLSSDTLLDILDLGAMTNPM 235 (310)
T ss_dssp EEEECHHHHHHHHHHHHHHEEEEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHSTTCCHH
T ss_pred EEcCCHHHHHHHHHHHHHhCCCEEEeCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcccccHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998777765
Q ss_pred ccCCCCCCCcccCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHCCCCCCcHHHHHHHHhcC
Q 018506 272 SDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENGHDSKDFSCVFQHYYGG 351 (355)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~gv~~pi~~~~~~~~~~~~~~g~g~~d~~~~~~~~~~~ 351 (355)
..... + ++..++|.++|+++++.||++++++++++.|+++|+++.+.++|+.+.++|+|+.||+++++++.+.
T Consensus 236 ~~~~~--~-----~~~~~~~~~~f~~~~~~KDl~~~~~~a~~~g~~~p~~~~~~~~~~~a~~~g~g~~d~~~~~~~~~~~ 308 (310)
T 3doj_A 236 FKGKG--P-----SMNKSSYPPAFPLKHQQKDMRLALALGDENAVSMPVAAAANEAFKKARSLGLGDLDFSAVIEAVKFS 308 (310)
T ss_dssp HHHHH--H-----HHHTTCCCCSSBHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTTCTTSBGGGGHHHHHCC
T ss_pred HHHHh--h-----hhhcCCCCCCccHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHcCCCCcCHHHHHHHHHhc
Confidence 44321 1 2345689999999999999999999999999999999999999999999999999999999987664
No 4
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=100.00 E-value=9e-46 Score=342.47 Aligned_cols=297 Identities=43% Similarity=0.711 Sum_probs=270.6
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHHHHhcCCC
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNGPN 123 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl~~~~ 123 (355)
+||||+|||+|+||.+++..|+++||+|++|||++++++.+.+.|+..++++.++++++|+||+|+|++.+++.++....
T Consensus 2 ~m~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~ 81 (302)
T 2h78_A 2 HMKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDD 81 (302)
T ss_dssp -CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSS
T ss_pred CCCEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCeEcCCHHHHHhCCCeEEEECCCHHHHHHHHcCch
Confidence 46899999999999999999999999999999999999999999998899999999999999999999889999998433
Q ss_pred ccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCceEEeCCCCCChHHHhcCceEEEecCCHHHHHHH
Q 018506 124 GLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAA 203 (355)
Q Consensus 124 ~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~pv~g~~~~~~~g~~~~~~gg~~~~~~~v 203 (355)
++... ..++++||++|+..|...+.+.+.+.+ . +.+|+++|+++++..+..++++++++++++.++.+
T Consensus 82 ~~~~~--l~~~~~vi~~st~~~~~~~~l~~~~~~------~----g~~~~~~pv~~~~~~~~~g~l~~~~~g~~~~~~~~ 149 (302)
T 2h78_A 82 GLLAH--IAPGTLVLECSTIAPTSARKIHAAARE------R----GLAMLDAPVSGGTAGAAAGTLTFMVGGDAEALEKA 149 (302)
T ss_dssp CGGGS--SCSSCEEEECSCCCHHHHHHHHHHHHH------T----TCCEEECCEESCHHHHHHTCEEEEEESCHHHHHHH
T ss_pred hHHhc--CCCCcEEEECCCCCHHHHHHHHHHHHH------c----CCEEEEEEccCChhhHhcCCceEEeCCCHHHHHHH
Confidence 34433 225679999999999998888887753 1 27899999999999899999999999999999999
Q ss_pred HHHHHHcCCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcCCCcccccCCCCCCCccc
Q 018506 204 KPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCWSSDSYNPVPGVME 283 (355)
Q Consensus 204 ~~ll~~~g~~~~~~g~~g~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gi~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 283 (355)
+++|+.+|++++++++.+.+.+.|+++|.+.+.++++++|++.++++.|++++++.+++..+.+.+|....+.+.+++..
T Consensus 150 ~~ll~~~g~~~~~~~~~~~~~~~Kl~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~ 229 (302)
T 2h78_A 150 RPLFEAMGRNIFHAGPDGAGQVAKVCNNQLLAVLMIGTAEAMALGVANGLEAKVLAEIMRRSSGGNWALEVYNPWPGVME 229 (302)
T ss_dssp HHHHHHHEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSTTCCHHHHHCCCSTTTST
T ss_pred HHHHHHhCCCeEEcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcCCCCCHHHHHhCCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999888888777777777777
Q ss_pred CCCCCCCCCCCcchhhHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHCCCCCCcHHHHHHHHhcCC
Q 018506 284 GVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENGHDSKDFSCVFQHYYGGK 352 (355)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~gv~~pi~~~~~~~~~~~~~~g~g~~d~~~~~~~~~~~~ 352 (355)
.++..++|.++|.++++.||++++++++++.|+++|+++.+.++|+.+.+.|+|++||+++++++.+..
T Consensus 230 ~~~~~~~~~~g~~~~~~~kD~~~~~~~a~~~g~~~p~~~~~~~~~~~a~~~g~g~~d~~~~~~~~~~~~ 298 (302)
T 2h78_A 230 NAPASRDYSGGFMAQLMAKDLGLAQEAAQASASSTPMGSLALSLYRLLLKQGYAERDFSVVQKLFDPTQ 298 (302)
T ss_dssp TSGGGGTTCSSSBHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHTTCTTSBGGGGHHHHCTTC
T ss_pred ccccCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHhc
Confidence 778889999999999999999999999999999999999999999999999999999999999886543
No 5
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=100.00 E-value=2.1e-46 Score=349.23 Aligned_cols=290 Identities=26% Similarity=0.414 Sum_probs=260.1
Q ss_pred CCCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHHHHhcCC
Q 018506 43 CQFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNGP 122 (355)
Q Consensus 43 ~~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl~~~ 122 (355)
..+|||+|||+|.||.+++.+|+++||+|++|||++++++.+.+.|+..++++.++++++|+||+|+|++..++.++...
T Consensus 29 ~~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~~ 108 (320)
T 4dll_A 29 PYARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAARDADIVVSMLENGAVVQDVLFAQ 108 (320)
T ss_dssp CCCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSEEEECCSSHHHHHHHHTTT
T ss_pred cCCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCEEEEECCCHHHHHHHHcch
Confidence 45689999999999999999999999999999999999999999898888999999999999999999988999988732
Q ss_pred CccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCceEEeCCCCCChHHHhcCceEEEecCCHHHHHH
Q 018506 123 NGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQA 202 (355)
Q Consensus 123 ~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~pv~g~~~~~~~g~~~~~~gg~~~~~~~ 202 (355)
+++.. ..++++|||+||+.|...+.+.+.+.+ . +.+|+++|+++++..+..+++.+++||++++++.
T Consensus 109 -~~~~~--l~~~~~vi~~st~~~~~~~~~~~~~~~------~----g~~~~~~pv~g~~~~a~~g~l~i~~gg~~~~~~~ 175 (320)
T 4dll_A 109 -GVAAA--MKPGSLFLDMASITPREARDHAARLGA------L----GIAHLDTPVSGGTVGAEQGTLVIMAGGKPADFER 175 (320)
T ss_dssp -CHHHH--CCTTCEEEECSCCCHHHHHHHHHHHHH------T----TCEEEECCEECHHHHHHHTCEEEEEESCHHHHHH
T ss_pred -hHHhh--CCCCCEEEecCCCCHHHHHHHHHHHHH------c----CCEEEeCCCcCCHhHHhcCCeeEEeCCCHHHHHH
Confidence 33332 125689999999999999998887754 1 2789999999999999999999999999999999
Q ss_pred HHHHHHHcCCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcCCCcccccCCCCCCCcc
Q 018506 203 AKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCWSSDSYNPVPGVM 282 (355)
Q Consensus 203 v~~ll~~~g~~~~~~g~~g~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gi~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 282 (355)
++++|+.+ ++++++|+.|.+.++|+++|.+.+..+++++|++.++++.|+|++++.+++..+.+.+|......+
T Consensus 176 ~~~ll~~~-~~~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~~~~~~~s~~~~~~~~----- 249 (320)
T 4dll_A 176 SLPLLKVF-GRATHVGPHGSGQLTKLANQMIVGITIGAVAEALLFATKGGADMAKVKEAITGGFADSRVLQLHGQ----- 249 (320)
T ss_dssp HHHHHHHH-EEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHTTSTTCBHHHHTHHH-----
T ss_pred HHHHHHhc-CCEEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcccccCHHHHHhhh-----
Confidence 99999999 889999999999999999999999999999999999999999999999999998877776543322
Q ss_pred cCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHCCCCCCcHHHHHHHHhcCCC
Q 018506 283 EGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENGHDSKDFSCVFQHYYGGKD 353 (355)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~gv~~pi~~~~~~~~~~~~~~g~g~~d~~~~~~~~~~~~~ 353 (355)
++..++|.++|+++++.||++++++++++.|+++|+++.+.++|+.+.++|+|++||+++++++.+..+
T Consensus 250 --~~l~~~~~~gf~~~~~~KDl~~~~~~a~~~g~~~p~~~~~~~~~~~a~~~g~g~~d~~~~~~~~~~~~~ 318 (320)
T 4dll_A 250 --RMVERDFAPRARLSIQLKDMRNALATAQEIGFDAPITGLFEQLYAEGVEHGLTDLDQSGLFVELASRNG 318 (320)
T ss_dssp --HHHTTCCCCSSBHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHTTTTTTSBGGGHHHHHHHC--
T ss_pred --hhccCCCCCcccHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHhcCCCCcCHHHHHHHHHHhcC
Confidence 234568999999999999999999999999999999999999999999999999999999998876544
No 6
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=100.00 E-value=3.4e-46 Score=342.86 Aligned_cols=286 Identities=31% Similarity=0.484 Sum_probs=257.5
Q ss_pred CceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHHHHhcCCCc
Q 018506 45 FESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNGPNG 124 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl~~~~~ 124 (355)
||||+|||+|+||.+++.+|+++||+|++|||++++++.+.+.|+..++++.++++++|+||+|+|++.++++++....+
T Consensus 1 M~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~advvi~~v~~~~~~~~v~~~~~~ 80 (287)
T 3pdu_A 1 MTTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVALGARQASSPAEVCAACDITIAMLADPAAAREVCFGANG 80 (287)
T ss_dssp CCCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHHTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTC
T ss_pred CCeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHHcCCEEEEEcCCHHHHHHHHcCchh
Confidence 57999999999999999999999999999999999999999888888899999999999999999998889999844333
Q ss_pred cccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCceEEeCCCCCChHHHhcCceEEEecCCHHHHHHHH
Q 018506 125 LLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAAK 204 (355)
Q Consensus 125 ~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~pv~g~~~~~~~g~~~~~~gg~~~~~~~v~ 204 (355)
+... ..+++++||+||+.|...+.+.+.+.+ . +.+|+++|+++++..+..+++++++|++++.++.++
T Consensus 81 l~~~--l~~g~~vv~~st~~~~~~~~~~~~~~~------~----g~~~~~~pv~g~~~~a~~g~l~~~~gg~~~~~~~~~ 148 (287)
T 3pdu_A 81 VLEG--IGGGRGYIDMSTVDDETSTAIGAAVTA------R----GGRFLEAPVSGTKKPAEDGTLIILAAGDQSLFTDAG 148 (287)
T ss_dssp GGGT--CCTTCEEEECSCCCHHHHHHHHHHHHH------T----TCEEEECCEECCHHHHHHTCEEEEEEECHHHHHHTH
T ss_pred hhhc--ccCCCEEEECCCCCHHHHHHHHHHHHH------c----CCEEEECCccCCHHHHhcCCEEEEEeCCHHHHHHHH
Confidence 4433 235689999999999999988887753 1 278999999999999999999999999999999999
Q ss_pred HHHHHcCCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcCCCcccccCCCCCCCcccC
Q 018506 205 PLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCWSSDSYNPVPGVMEG 284 (355)
Q Consensus 205 ~ll~~~g~~~~~~g~~g~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gi~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 284 (355)
++|+.+|++++++++.|.+.++|+++|.+.+.++++++|++.++++.|+|++++.+++..+...+|...... +
T Consensus 149 ~ll~~~g~~~~~~g~~g~~~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~s~~~~~~~--~----- 221 (287)
T 3pdu_A 149 PAFAALGKKCLHLGEVGQGARMKLVVNMIMGQMMTALGEGMALGRNCGLDGGQLLEVLDAGAMANPMFKGKG--Q----- 221 (287)
T ss_dssp HHHHHHEEEEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHSTTCCHHHHHHH--H-----
T ss_pred HHHHHhCCCEEEcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhccccChHHHhhc--c-----
Confidence 999999999999999999999999999999999999999999999999999999999999887777554332 1
Q ss_pred CCCCCCCCCCcchhhHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHCCCCCCcHHHHHHHHh
Q 018506 285 VPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENGHDSKDFSCVFQHYY 349 (355)
Q Consensus 285 ~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~gv~~pi~~~~~~~~~~~~~~g~g~~d~~~~~~~~~ 349 (355)
++..++|.++|+++++.||++++++++++.|+++|+++.++++|+++.++|+|++||+++++++.
T Consensus 222 ~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~g~~~p~~~~~~~~~~~a~~~g~~~~d~~~~~~~~~ 286 (287)
T 3pdu_A 222 MLLSGEFPTSFPLKHMQKDLRLAVELGDRLGQPLHGAATANESFKRARAAGHADEDFAAVFRVLE 286 (287)
T ss_dssp HHHHTCCCCSSBHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHTTCTTSBGGGGHHHHC
T ss_pred ccccCCCCCCCcHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHhcCCCcCCHHHHHHHHh
Confidence 23356888999999999999999999999999999999999999999999999999999999764
No 7
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=100.00 E-value=6.1e-46 Score=343.72 Aligned_cols=289 Identities=27% Similarity=0.402 Sum_probs=255.2
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCC-CCCHHHHhhcCCEEEEeCCCchHHHHHhcCC
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPT-KETPFEVAEASDVVITMLPSSSHVLDVYNGP 122 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~-~~s~~e~~~~aDiVi~~v~~~~~~~~vl~~~ 122 (355)
++|||+|||+|.||.+|+.+|+++||+|++|||++++++.+.+.|... ++++.++++++|+||+|+|++..++.++...
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~e~~~~aDvvi~~vp~~~~~~~v~~~~ 85 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAASAREFAGVVDALVILVVNAAQVRQVLFGE 85 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEESSSTTTTTTCSEEEECCSSHHHHHHHHC--
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccCCHHHHHhcCCEEEEECCCHHHHHHHHhCh
Confidence 458999999999999999999999999999999999999999988887 8899999999999999999988899988433
Q ss_pred CccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCceEEeCCCCCChHHHhcCceEEEecCCHHHHHH
Q 018506 123 NGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQA 202 (355)
Q Consensus 123 ~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~pv~g~~~~~~~g~~~~~~gg~~~~~~~ 202 (355)
.++... ..++++|||+||+.|...+.+.+.+.+ . +.+|+++|+++++..+..+++.+++|++++.++.
T Consensus 86 ~~l~~~--l~~g~ivv~~st~~~~~~~~~~~~~~~------~----g~~~~~~pv~g~~~~a~~g~l~~~~gg~~~~~~~ 153 (303)
T 3g0o_A 86 DGVAHL--MKPGSAVMVSSTISSADAQEIAAALTA------L----NLNMLDAPVSGGAVKAAQGEMTVMASGSEAAFTR 153 (303)
T ss_dssp CCCGGG--SCTTCEEEECSCCCHHHHHHHHHHHHT------T----TCEEEECCEESCHHHHHTTCEEEEEECCHHHHHH
T ss_pred hhHHhh--CCCCCEEEecCCCCHHHHHHHHHHHHH------c----CCeEEeCCCCCChhhhhcCCeEEEeCCCHHHHHH
Confidence 333332 125689999999999999988887753 1 3789999999999999999999999999999999
Q ss_pred HHHHHHHcCCCeEEeCC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcCCCcccccCCCCCCCc
Q 018506 203 AKPLFLSMGKNTIYCGG-AGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCWSSDSYNPVPGV 281 (355)
Q Consensus 203 v~~ll~~~g~~~~~~g~-~g~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gi~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 281 (355)
++++|+.+|++++++++ +|.+.+.|+++|.+.+.++++++|++.++++.|+|++++.+++..+.+.+|...... +.+
T Consensus 154 ~~~ll~~~g~~~~~~~~~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~~~~~~~s~~~~~~~--~~~ 231 (303)
T 3g0o_A 154 LKPVLDAVASNVYRISDTPGAGSTVKIIHQLLAGVHIAAAAEAMALAARAGIPLDVMYDVVTHAAGNSWMFENRM--QHV 231 (303)
T ss_dssp HHHHHHHHEEEEEEEESSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTTSTTCCHHHHHHH--HHH
T ss_pred HHHHHHHHCCCEEECCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcccCCHHHHhhh--HHH
Confidence 99999999999999998 999999999999999999999999999999999999999999999877777654322 222
Q ss_pred ccCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHCCCCCCcHHHHHHHHhcC
Q 018506 282 MEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENGHDSKDFSCVFQHYYGG 351 (355)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~gv~~pi~~~~~~~~~~~~~~g~g~~d~~~~~~~~~~~ 351 (355)
..++|.++|+++++.||++++++++++.|+++|+++.++++|+++.++|+|++||+++++++.++
T Consensus 232 -----~~~~~~~~~~~~~~~kD~~~~~~~a~~~g~~~p~~~~~~~~~~~a~~~g~g~~d~~~~~~~~~~~ 296 (303)
T 3g0o_A 232 -----VDGDYTPRSAVDIFVKDLGLVADTAKALRFPLPLASTALNMFTSASNAGYGKEDDSAVIKIFSGE 296 (303)
T ss_dssp -----HTTCCCCSSBHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTTTTTSBGGGGGGGC---
T ss_pred -----hcCCCCCCCchHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHhcCCCccCHHHHHHHHHhc
Confidence 34688899999999999999999999999999999999999999999999999999999976544
No 8
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=100.00 E-value=1.5e-45 Score=338.51 Aligned_cols=285 Identities=33% Similarity=0.497 Sum_probs=256.3
Q ss_pred ceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHHHHhcCCCcc
Q 018506 46 ESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNGPNGL 125 (355)
Q Consensus 46 mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl~~~~~~ 125 (355)
|||+|||+|.||.+++.+|+++||+|++|||++++++.+.+.|+..++++.++++++|+||+|+|++.++++++....++
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~l 81 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFAMLADPAAAEEVCFGKHGV 81 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEcCCHHHHHHHHcCcchH
Confidence 79999999999999999999999999999999999999999999999999999999999999999888999998433333
Q ss_pred ccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCceEEeCCCCCChHHHhcCceEEEecCCHHHHHHHHH
Q 018506 126 LQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAAKP 205 (355)
Q Consensus 126 l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~pv~g~~~~~~~g~~~~~~gg~~~~~~~v~~ 205 (355)
... ..++++|||+||+.|.+.+.+.+.+.+ . +.+|+++|+++++..+..+++.+++|++++.++.+++
T Consensus 82 ~~~--l~~~~~vi~~st~~~~~~~~~~~~~~~------~----g~~~~~~pv~g~~~~a~~g~l~~~~gg~~~~~~~~~~ 149 (287)
T 3pef_A 82 LEG--IGEGRGYVDMSTVDPATSQRIGVAVVA------K----GGRFLEAPVSGSKKPAEDGTLIILAAGDRNLYDEAMP 149 (287)
T ss_dssp HHH--CCTTCEEEECSCCCHHHHHHHHHHHHH------T----TCEEEECCEECCHHHHHHTCEEEEEEECHHHHHHHHH
T ss_pred hhc--CCCCCEEEeCCCCCHHHHHHHHHHHHH------h----CCEEEECCCcCCHHHHhcCCEEEEEeCCHHHHHHHHH
Confidence 332 125679999999999999988887753 1 2789999999999999999999999999999999999
Q ss_pred HHHHcCCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcCCCcccccCCCCCCCcccCC
Q 018506 206 LFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCWSSDSYNPVPGVMEGV 285 (355)
Q Consensus 206 ll~~~g~~~~~~g~~g~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gi~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 285 (355)
+|+.+|.+++++++.|.+.+.|+++|.+.+.++++++|++.++++.|+|++++.+++..+...+|...... + .
T Consensus 150 ll~~~g~~~~~~g~~g~~~~~Kl~~N~~~~~~~~~~~E~~~l~~~~G~d~~~~~~~~~~~~~~s~~~~~~~--~-----~ 222 (287)
T 3pef_A 150 GFEKMGKKIIHLGDVGKGAEMKLVVNMVMGGMMACFCEGLALGEKAGLATDAILDVIGAGAMANPMFALKG--G-----L 222 (287)
T ss_dssp HHHHHEEEEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHSTTCCHHHHHHH--H-----H
T ss_pred HHHHhCCCeEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcccccHHHHHHh--h-----h
Confidence 99999999999999999999999999999999999999999999999999999999999887777554332 1 2
Q ss_pred CCCCCCCCCcchhhHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHCCCCCCcHHHHHHHHh
Q 018506 286 PASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENGHDSKDFSCVFQHYY 349 (355)
Q Consensus 286 ~~~~~~~~~~~~~~~~kd~~~~~~~a~~~gv~~pi~~~~~~~~~~~~~~g~g~~d~~~~~~~~~ 349 (355)
+..++|.++|.++++.||++++++++++.|+++|+++.++++|+++.++|+|++||+++++++.
T Consensus 223 ~~~~~~~~~~~~~~~~kd~~~~~~~a~~~g~~~p~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~ 286 (287)
T 3pef_A 223 IRDRNFAPAFPLKHMQKDLRLAVALGDRVGQPLVASAAANELFKGARAAGFGDEDFSAIFKTYE 286 (287)
T ss_dssp HHTTCCCCSSBHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHTTCTTSBGGGGGGGGC
T ss_pred hhcCCCCCCCchHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHcCCCccCHHHHHHHHh
Confidence 3356888999999999999999999999999999999999999999999999999999998653
No 9
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=100.00 E-value=1.6e-42 Score=319.73 Aligned_cols=269 Identities=28% Similarity=0.361 Sum_probs=240.9
Q ss_pred CceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHHHHhcCCCc
Q 018506 45 FESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNGPNG 124 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl~~~~~ 124 (355)
+|||+|||+|.||.++|.+|+++||+|++|||++++++.+.+.|+..+++++++++ +|+||+|+|++.++++++.++.+
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~-aDvvi~~vp~~~~~~~v~~~l~~ 93 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAA-ADLIHITVLDDAQVREVVGELAG 93 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTT-SSEEEECCSSHHHHHHHHHHHHT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHh-CCEEEEECCChHHHHHHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999998 99999999998888888855433
Q ss_pred cccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCceEEeCCCCCChHHHhcCceEEEecCCHHHHHHHH
Q 018506 125 LLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAAK 204 (355)
Q Consensus 125 ~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~pv~g~~~~~~~g~~~~~~gg~~~~~~~v~ 204 (355)
.+ .++++|||+||+.|.+.+++.+.+.+ . +.+|+++|+++++..+..+++.+++||+++.+++++
T Consensus 94 ~l-----~~g~ivv~~st~~~~~~~~~~~~~~~------~----g~~~~~~pv~g~~~~a~~g~l~~~~gg~~~~~~~~~ 158 (296)
T 3qha_A 94 HA-----KPGTVIAIHSTISDTTAVELARDLKA------R----DIHIVDAPVSGGAAAAARGELATMVGADREVYERIK 158 (296)
T ss_dssp TC-----CTTCEEEECSCCCHHHHHHHHHHHGG------G----TCEEEECCEESCHHHHHHTCEEEEEECCHHHHHHHH
T ss_pred hc-----CCCCEEEEeCCCCHHHHHHHHHHHHH------c----CCEEEeCCCcCCHHHHhcCCccEEecCCHHHHHHHH
Confidence 33 25679999999999999999888753 1 278999999999999999999999999999999999
Q ss_pred HHHHHcCCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH------HHHHHhcCCCcccccCCCCC
Q 018506 205 PLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTL------TKILNSSSARCWSSDSYNPV 278 (355)
Q Consensus 205 ~ll~~~g~~~~~~g~~g~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gi~~~~~------~~~~~~~~~~s~~~~~~~~~ 278 (355)
++|+.++++++++|+.|.++++|+++|.+.+..+++++|++.++++.|+|++++ .+++..+.+.+|... .
T Consensus 159 ~ll~~~g~~~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~E~~~l~~~~G~d~~~~~~~~~~~~~i~~~~~~s~~~~----~ 234 (296)
T 3qha_A 159 PAFKHWAAVVIHAGEPGAGTRMKLARNMLTFTSYAAACEAMKLAEAAGLDLQALGRVVRHTDALTGGPGAIMVRD----N 234 (296)
T ss_dssp HHHHHHEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHCCGGGGCCCS----S
T ss_pred HHHHHHcCCeEEcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHhhhcchHHHHhcCcccCHHhh----c
Confidence 999999999999999999999999999999999999999999999999999999 999998877776543 2
Q ss_pred CCcccCCCCCCCCCCCcch-----hhHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHCCCCCC
Q 018506 279 PGVMEGVPASRNYGGGFAS-----KLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENGHDSK 339 (355)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~-----~~~~kd~~~~~~~a~~~gv~~pi~~~~~~~~~~~~~~g~g~~ 339 (355)
+. +.++ |.++|.+ +++.||++++++.|++.|+++|+++.++++|+.+.+.|++++
T Consensus 235 ~~-----~~~~-~~~~f~~~~~~~~~~~KD~~~~~~~a~~~g~~~p~~~~~~~~~~~~~~~g~~~~ 294 (296)
T 3qha_A 235 MK-----DLEP-DNFLYQPFLHTRGLGEKDLSLALALGEAVSVDLPLARLAYEGLAAGLGVPHKEK 294 (296)
T ss_dssp CS-----CCCT-TSTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHTCCC---
T ss_pred hh-----hhhc-CCCCCchhhhhhHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHhcCcccc
Confidence 22 2344 7889999 999999999999999999999999999999999999998553
No 10
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=100.00 E-value=1.7e-43 Score=327.68 Aligned_cols=284 Identities=15% Similarity=0.182 Sum_probs=244.7
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHHHHhcCCC
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNGPN 123 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl~~~~ 123 (355)
.+|||+|||+|.||.+|+.+|.++||+|++|||++++++.+.+.|+..++++.++++++|+||+|+|++.++++++.. .
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~-~ 86 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAAGAHLCESVKAALSASPATIFVLLDNHATHEVLGM-P 86 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTCEECSSHHHHHHHSSEEEECCSSHHHHHHHHTS-T
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEeCCHHHHHHHhcc-c
Confidence 468999999999999999999999999999999999999998888888899999999999999999998889998851 1
Q ss_pred ccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCceEEeCCCCCChHHHhcCceEEEecCCHHHHHHH
Q 018506 124 GLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAA 203 (355)
Q Consensus 124 ~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~pv~g~~~~~~~g~~~~~~gg~~~~~~~v 203 (355)
++ .. ..++++|||+||+.|...+++.+.+.+ . +.+|+++|++|+++....+.+++++||+++.++++
T Consensus 87 ~l-~~--~~~g~ivid~st~~~~~~~~l~~~~~~------~----g~~~vdapv~g~~~~~~~~~~~i~~gg~~~~~~~~ 153 (306)
T 3l6d_A 87 GV-AR--ALAHRTIVDYTTNAQDEGLALQGLVNQ------A----GGHYVKGMIVAYPRNVGHRESHSIHTGDREAFEQH 153 (306)
T ss_dssp TH-HH--HTTTCEEEECCCCCTTHHHHHHHHHHH------T----TCEEEEEEEESCGGGTTCTTCEEEEEECHHHHHHH
T ss_pred ch-hh--ccCCCEEEECCCCCHHHHHHHHHHHHH------c----CCeEEecccccCcccccCCceEEEEcCCHHHHHHH
Confidence 22 21 125689999999999999999887753 2 37899999999988777777899999999999999
Q ss_pred HHHHHHcCCCeEEe--CC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcC--CCcccccCCCCC
Q 018506 204 KPLFLSMGKNTIYC--GG-AGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSS--ARCWSSDSYNPV 278 (355)
Q Consensus 204 ~~ll~~~g~~~~~~--g~-~g~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gi~~~~~~~~~~~~~--~~s~~~~~~~~~ 278 (355)
+++|+.++.+++++ |+ +|.+..+| .+.+.++++++|++.++++.|+|++++.++++.+. +.+|....+.+
T Consensus 154 ~~ll~~lg~~~~~~~~g~~~g~g~~~k----~~~~~~~~~~~Ea~~la~~~Gld~~~~~~~~~~~~~~~~s~~~~~~~~- 228 (306)
T 3l6d_A 154 RALLEGLAGHTVFLPWDEALAFATVLH----AHAFAAMVTFFEAVGAGDRFGLPVSKTARLLLETSRFFVADALEEAVR- 228 (306)
T ss_dssp HHHHHTTCSEEEECCHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred HHHHHHhcCCEEEecCCCCccHHHHHH----HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhhhhcccHHHHHHHH-
Confidence 99999998889999 87 89999999 34456788999999999999999999999999875 46665443321
Q ss_pred CCcccCCCCCCCCCCC-cchhhHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHCCCCCCcHHHHHHHHhcCC
Q 018506 279 PGVMEGVPASRNYGGG-FASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENGHDSKDFSCVFQHYYGGK 352 (355)
Q Consensus 279 ~~~~~~~~~~~~~~~~-~~~~~~~kd~~~~~~~a~~~gv~~pi~~~~~~~~~~~~~~g~g~~d~~~~~~~~~~~~ 352 (355)
++.+++|.++ |+++++.||++++++.+++.|+++|+.+++.++|+.+.++|+|++||+++++++.+..
T Consensus 229 ------~~~~~~~~~~~~~~~~~~KDl~~~~~~a~~~g~~~p~~~~~~~~~~~a~~~g~g~~d~~a~~~~~~~~~ 297 (306)
T 3l6d_A 229 ------RLETQDFKGDQARLDVHADAFAHIAQSLHAQGVWTPVFDAVCQVVQRAAAMGYGDQDIAATTKSFAREQ 297 (306)
T ss_dssp ------HHHHTCCCTTSSBHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTTTTTSBGGGGGGGGC---
T ss_pred ------HHhcCCCCCCcccHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCCccCHHHHHHHHHhHH
Confidence 2335688875 7899999999999999999999999999999999999999999999999999765543
No 11
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=100.00 E-value=2.1e-41 Score=312.21 Aligned_cols=295 Identities=52% Similarity=0.851 Sum_probs=258.4
Q ss_pred ceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHHHHhcCCCcc
Q 018506 46 ESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNGPNGL 125 (355)
Q Consensus 46 mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl~~~~~~ 125 (355)
|||+|||+|.||.+++..|.++||+|++|||++++++.+.+.|+..++++.++++++|+||+|+|.+.+++.++..+.++
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~~vp~~~~~~~v~~~~~~~ 80 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQVVSSPADVAEKADRIITMLPTSINAIEAYSGANGI 80 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHTTCCEEEECSSTHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTSG
T ss_pred CeEEEEeccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEeCCCHHHHHHHHhCchhH
Confidence 68999999999999999999999999999999999999988888888899999999999999999888999998876554
Q ss_pred ccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCceEEeCCCCCChHHHhcCceEEEecCCHHHHHHHHH
Q 018506 126 LQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAAKP 205 (355)
Q Consensus 126 l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~pv~g~~~~~~~g~~~~~~gg~~~~~~~v~~ 205 (355)
+... .++++||++++..+...+.+.+.+.+ . +..|++.|+.+++..+..+.+.++.+++++.++.+++
T Consensus 81 ~~~l--~~~~~vv~~s~~~~~~~~~~~~~~~~------~----g~~~~~~p~~~g~~~a~~~~~~~~~~~~~~~~~~v~~ 148 (296)
T 2gf2_A 81 LKKV--KKGSLLIDSSTIDPAVSKELAKEVEK------M----GAVFMDAPVSGGVGAARSGNLTFMVGGVEDEFAAAQE 148 (296)
T ss_dssp GGTC--CTTCEEEECSCCCHHHHHHHHHHHHH------T----TCEEEECCEESHHHHHHHTCEEEEEESCGGGHHHHHH
T ss_pred HhcC--CCCCEEEECCCCCHHHHHHHHHHHHH------c----CCEEEEcCCCCChhHHhcCcEEEEeCCCHHHHHHHHH
Confidence 4321 25679999999999888877776653 1 2689999999888777888888999999999999999
Q ss_pred HHHHcCCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcCCCcccccCCCCCCCcccCC
Q 018506 206 LFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCWSSDSYNPVPGVMEGV 285 (355)
Q Consensus 206 ll~~~g~~~~~~g~~g~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gi~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 285 (355)
+|+.+|.+++++++.|.+.++|+++|.+....+.++.|++.++++.|++++++.+++..+.+.+|......+.++++...
T Consensus 149 l~~~~g~~~~~~~~~g~~~~~kl~~n~~~~~~~~~~~Ea~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s 228 (296)
T 2gf2_A 149 LLGCMGSNVVYCGAVGTGQAAKICNNMLLAISMIGTAEAMNLGIRLGLDPKLLAKILNMSSGRCWSSDTYNPVPGVMDGV 228 (296)
T ss_dssp HHTTTEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSTTCBHHHHHSCSSTTTCSSS
T ss_pred HHHHHcCCeEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhCcccCHHHHhcCCcccccccc
Confidence 99999999999999999999999999988888999999999999999999999999998776666655444556665544
Q ss_pred CCCCCCCCCcchhhHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHCCCCCCcHHHHHHHHhcCC
Q 018506 286 PASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENGHDSKDFSCVFQHYYGGK 352 (355)
Q Consensus 286 ~~~~~~~~~~~~~~~~kd~~~~~~~a~~~gv~~pi~~~~~~~~~~~~~~g~g~~d~~~~~~~~~~~~ 352 (355)
+..++|.++|.++.+.||++.++++++++|+++|+++.++++++.+.++|+|++||+++++++.+.+
T Consensus 229 ~~~~~~~~g~~~~~~~kd~~~~~~~a~~~gv~~p~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~ 295 (296)
T 2gf2_A 229 PSANNYQGGFGTTLMAKDLGLAQDSATSTKSPILLGSLAHQIYRMMCAKGYSKKDFSSVFQFLREEE 295 (296)
T ss_dssp GGGGTTCSSSBHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHTTTCTTSBGGGHHHHHSCCC
T ss_pred hhccCCCCCCchHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHcCCCccCHHHHHHHHHhcc
Confidence 5567888899999999999999999999999999999999999999999999999999999775543
No 12
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=100.00 E-value=1e-39 Score=301.37 Aligned_cols=286 Identities=38% Similarity=0.551 Sum_probs=247.8
Q ss_pred ceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHHHHhcCCCcc
Q 018506 46 ESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNGPNGL 125 (355)
Q Consensus 46 mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl~~~~~~ 125 (355)
|||+|||+|.||..++..|.+.||+|++|||++++.+.+.+.|+....++.++++++|+||+|+|++.+++.++....++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~v~~~~~~~~~~~~~~~l 85 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGI 85 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHhCcchH
Confidence 79999999999999999999999999999999999999988888888899999999999999999888889888322222
Q ss_pred ccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCceEEeCCCCCChHHHhcCceEEEecCCHHHHHHHHH
Q 018506 126 LQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAAKP 205 (355)
Q Consensus 126 l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~pv~g~~~~~~~g~~~~~~gg~~~~~~~v~~ 205 (355)
... ..++++||+++++.+...+.+.+.+.+ . +.+|+++|+++++..+..+...++++++++.++.+++
T Consensus 86 ~~~--l~~~~~vv~~s~~~~~~~~~l~~~~~~------~----g~~~~~~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (299)
T 1vpd_A 86 IEG--AKPGTVLIDMSSIAPLASREISDALKA------K----GVEMLDAPVSGGEPKAIDGTLSVMVGGDKAIFDKYYD 153 (299)
T ss_dssp HHH--CCTTCEEEECSCCCHHHHHHHHHHHHT------T----TCEEEECCEESHHHHHHHTCEEEEEESCHHHHHHHHH
T ss_pred hhc--CCCCCEEEECCCCCHHHHHHHHHHHHH------c----CCeEEEecCCCCHhHHhcCCEEEEeCCCHHHHHHHHH
Confidence 221 125679999999999877888887753 1 2789999999888888888888999999999999999
Q ss_pred HHHHcCCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcCCCcccccCCCCCCCcccCC
Q 018506 206 LFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCWSSDSYNPVPGVMEGV 285 (355)
Q Consensus 206 ll~~~g~~~~~~g~~g~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gi~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 285 (355)
+|+.+|.+++++++.+.+.+.|+++|.+.+.++.++.|++.++++.|++++++.+++..+...+|..... .+.+
T Consensus 154 ll~~~g~~~~~~~~~~~~~~~Kl~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~s~~~~~~--~~~~---- 227 (299)
T 1vpd_A 154 LMKAMAGSVVHTGDIGAGNVTKLANQVIVALNIAAMSEALTLATKAGVNPDLVYQAIRGGLAGSTVLDAK--APMV---- 227 (299)
T ss_dssp HHHTTEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTTSTTCCHHHHHH--HHHH----
T ss_pred HHHHHcCCeEEeCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHccCCCCHHHHHh--hhHh----
Confidence 9999999999999999999999999999999999999999999999999999999999877665543211 1222
Q ss_pred CCCCCCCCCcchhhHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHCCCCCCcHHHHHHHHhc
Q 018506 286 PASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENGHDSKDFSCVFQHYYG 350 (355)
Q Consensus 286 ~~~~~~~~~~~~~~~~kd~~~~~~~a~~~gv~~pi~~~~~~~~~~~~~~g~g~~d~~~~~~~~~~ 350 (355)
..++|.++++++...||++.++++++++|+++|+++.++++++.+.+.|+|++||+++++++.+
T Consensus 228 -l~~~~~~g~~~~~~~kd~~~~~~~a~~~gv~~p~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~ 291 (299)
T 1vpd_A 228 -MDRNFKPGFRIDLHIKDLANALDTSHGVGAQLPLTAAVMEMMQALRADGHGNDDHSALACYYEK 291 (299)
T ss_dssp -HTTCCCCSSBHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHTTCTTSBGGGHHHHHHH
T ss_pred -hcCCCCCCCChHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHhcCCCccCHHHHHHHHHH
Confidence 2346778899999999999999999999999999999999999999999999999999998754
No 13
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=100.00 E-value=9.2e-39 Score=295.20 Aligned_cols=287 Identities=36% Similarity=0.548 Sum_probs=247.8
Q ss_pred CceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHHHHhcCCCc
Q 018506 45 FESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNGPNG 124 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl~~~~~ 124 (355)
+|||+|||+|.||..++..|.+.||+|++|||++++.+.+.+.|+...+++.++++++|+||+|+|.+.+++.++....+
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~ 83 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLMEANVAAVVAQGAQACENNQKVAAASDIIFTSLPNAGIVETVMNGPGG 83 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTC
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHcCcch
Confidence 58999999999999999999999999999999999999998888888889999999999999999988889988853222
Q ss_pred cccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCceEEeCCCCCChHHHhcCceEEEecCCHHHHHHHH
Q 018506 125 LLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAAK 204 (355)
Q Consensus 125 ~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~pv~g~~~~~~~g~~~~~~gg~~~~~~~v~ 204 (355)
+... ..++++|++++++.|...+.+.+.+.+ . +.+|++.|+.+++..+..+.++++++++++.++.++
T Consensus 84 l~~~--l~~~~~vv~~~~~~~~~~~~l~~~~~~------~----g~~~~~~p~~~~~~~a~~g~~~~~~~g~~~~~~~v~ 151 (301)
T 3cky_A 84 VLSA--CKAGTVIVDMSSVSPSSTLKMAKVAAE------K----GIDYVDAPVSGGTKGAEAGTLTIMVGASEAVFEKIQ 151 (301)
T ss_dssp HHHH--SCTTCEEEECCCCCHHHHHHHHHHHHH------T----TCEEEECCEESHHHHHHHTCEEEEEESCHHHHHHHH
T ss_pred Hhhc--CCCCCEEEECCCCCHHHHHHHHHHHHH------c----CCeEEEccCCCCHHHHHcCCeEEEECCCHHHHHHHH
Confidence 2221 125679999999998888888887753 1 268889999988877778888888999999999999
Q ss_pred HHHHHcCCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcCCCcccccCCCCCC-Cccc
Q 018506 205 PLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCWSSDSYNPVP-GVME 283 (355)
Q Consensus 205 ~ll~~~g~~~~~~g~~g~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gi~~~~~~~~~~~~~~~s~~~~~~~~~~-~~~~ 283 (355)
++|+.+|.+++++++.|.+.+.|+++|.+...+..++.|++.++++.|++++++.+++..+...+|..... .+ .+
T Consensus 152 ~ll~~~g~~~~~~~~~g~~~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-- 227 (301)
T 3cky_A 152 PVLSVIGKDIYHVGDTGAGDAVKIVNNLLLGCNMASLAEALVLGVKCGLKPETMQEIIGKSSGRSYAMEAK--MEKFI-- 227 (301)
T ss_dssp HHHHHHEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSTTCBHHHHHH--CCCCC--
T ss_pred HHHHHhcCCEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcCCCCCHHHHHh--hhhhh--
Confidence 99999999888999999999999999999999999999999999999999999999999876555533221 12 22
Q ss_pred CCCCCCCCCCCcchhhHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHCCCCCCcHHHHHHHHhc
Q 018506 284 GVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENGHDSKDFSCVFQHYYG 350 (355)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~gv~~pi~~~~~~~~~~~~~~g~g~~d~~~~~~~~~~ 350 (355)
..++|.+++.++.+.||++.++++++++|+++|+++.++++++++.+.|+|+.||+++++.+.+
T Consensus 228 ---l~~~~~~g~~~~~~~kd~~~~~~~a~~~gv~~p~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~ 291 (301)
T 3cky_A 228 ---MSGDFAGGFAMDLQHKDLGLALEAGKEGNVPLPMTAMATQIFEGGRAMGLGREDMSAVIKVWEQ 291 (301)
T ss_dssp ---CTCCCSSSSBHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHTTCTTSBGGGGHHHHHH
T ss_pred ---hcCCCCCCccHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHhcCCCccCHHHHHHHHHH
Confidence 2457788999999999999999999999999999999999999999999999999999997754
No 14
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=100.00 E-value=5.2e-39 Score=295.95 Aligned_cols=287 Identities=33% Similarity=0.503 Sum_probs=246.7
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHHHHhcCCC
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNGPN 123 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl~~~~ 123 (355)
+||||+|||+|.||..++..|.+.||+|++|| ++++++.+.+.|+....++.++++++|+||+|+|.+.+++.++....
T Consensus 2 ~~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~ 80 (295)
T 1yb4_A 2 NAMKLGFIGLGIMGSPMAINLARAGHQLHVTT-IGPVADELLSLGAVNVETARQVTEFADIIFIMVPDTPQVEDVLFGEH 80 (295)
T ss_dssp --CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SSCCCHHHHTTTCBCCSSHHHHHHTCSEEEECCSSHHHHHHHHHSTT
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CHHHHHHHHHcCCcccCCHHHHHhcCCEEEEECCCHHHHHHHHhCch
Confidence 45899999999999999999999999999999 99999988888888888999999999999999999888889887322
Q ss_pred ccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCceEEeCCCCCChHHHhcCceEEEecCCHHHHHHH
Q 018506 124 GLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAA 203 (355)
Q Consensus 124 ~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~pv~g~~~~~~~g~~~~~~gg~~~~~~~v 203 (355)
++... ..++++|++++++.|...+.+.+.+.+ . +.+|++.|+++++..+..+.+.++++++++.++.+
T Consensus 81 ~l~~~--l~~~~~vv~~s~~~~~~~~~l~~~~~~------~----g~~~~~~p~~~~~~~a~~g~~~~~~~~~~~~~~~~ 148 (295)
T 1yb4_A 81 GCAKT--SLQGKTIVDMSSISPIETKRFAQRVNE------M----GADYLDAPVSGGEIGAREGTLSIMVGGEQKVFDRV 148 (295)
T ss_dssp SSTTS--CCTTEEEEECSCCCHHHHHHHHHHHHT------T----TEEEEECCEESHHHHHHHTCEEEEEESCHHHHHHH
T ss_pred hHhhc--CCCCCEEEECCCCCHHHHHHHHHHHHH------c----CCeEEEccCCCCHHHHHcCCeEEEECCCHHHHHHH
Confidence 23222 125689999999998888888887753 1 27889999998887777888888999999999999
Q ss_pred HHHHHHcCCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcCCCcccccCCCCCCCccc
Q 018506 204 KPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCWSSDSYNPVPGVME 283 (355)
Q Consensus 204 ~~ll~~~g~~~~~~g~~g~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gi~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 283 (355)
+++|+.+|.+++++++.+.+.+.|+++|.+...++.++.|++.++++.|++++++.+++..+...+|..... .+.
T Consensus 149 ~~ll~~~g~~~~~~~~~~~~~~~Kl~~n~~~~~~~~~~~E~~~l~~~~G~~~~~~~~~~~~~~~~s~~~~~~--~~~--- 223 (295)
T 1yb4_A 149 KPLFDILGKNITLVGGNGDGQTCKVANQIIVALNIEAVSEALVFASKAGADPVRVRQALMGGFASSRILEVH--GER--- 223 (295)
T ss_dssp HHHHHHHEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTSSSSCBHHHHHH--HHH---
T ss_pred HHHHHHhcCCEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcCCCCCHHHHHh--hHH---
Confidence 999999999899999999999999999999999999999999999999999999999998877655432211 111
Q ss_pred CCCCCCCCCCCcchhhHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHCCCCCCcHHHHHHHHhc
Q 018506 284 GVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENGHDSKDFSCVFQHYYG 350 (355)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~gv~~pi~~~~~~~~~~~~~~g~g~~d~~~~~~~~~~ 350 (355)
+..++|.+++.++.+.||++.+++.+++.|+++|++++++++++++.+.|+|+.||+++++++.+
T Consensus 224 --~~~~~~~~g~~~~~~~kd~~~~~~~a~~~g~~~p~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~ 288 (295)
T 1yb4_A 224 --MINRTFEPGFKIALHQKDLNLALQSAKALALNLPNTATCQELFNTCAANGGSQLDHSAMVQALEL 288 (295)
T ss_dssp --HHTTCCCCSSBHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTTCTTSBGGGGHHHHHH
T ss_pred --HhcCCCCCCCchHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHcCCCccCHHHHHHHHHH
Confidence 22457888999999999999999999999999999999999999999999999999999997754
No 15
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=296.53 Aligned_cols=285 Identities=29% Similarity=0.472 Sum_probs=248.2
Q ss_pred CceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHHHHhcCCCc
Q 018506 45 FESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNGPNG 124 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl~~~~~ 124 (355)
+|||+|||+|.||..++..|.+.|++|++|||++++++.+.+.|+....++.++++++|+||+|+|++.+++.++....+
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~DvVi~av~~~~~~~~v~~~~~~ 109 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGPSG 109 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGGGGHHHHHTTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTC
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHcCCEEcCCHHHHHhcCCEEEEeCCCHHHHHHHHcCchh
Confidence 58999999999999999999999999999999999999988888877888999999999999999988899998887653
Q ss_pred cccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCceEEeCCCCCChHHHhcCceEEEecCCHHHHHHHH
Q 018506 125 LLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAAK 204 (355)
Q Consensus 125 ~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~pv~g~~~~~~~g~~~~~~gg~~~~~~~v~ 204 (355)
++.. ..++++||+++++.+...+.+.+.+.. . +..|+++|+++++.....+.+.++++++++.++.++
T Consensus 110 ~~~~--l~~~~~vv~~s~~~~~~~~~l~~~~~~------~----~~~~v~~p~~g~~~~~~~g~~~~~~~g~~~~~~~v~ 177 (316)
T 2uyy_A 110 VLQG--IRPGKCYVDMSTVDADTVTELAQVIVS------R----GGRFLEAPVSGNQQLSNDGMLVILAAGDRGLYEDCS 177 (316)
T ss_dssp GGGG--CCTTCEEEECSCCCHHHHHHHHHHHHH------T----TCEEEECCEESCHHHHHHTCEEEEEEECHHHHHHTH
T ss_pred Hhhc--CCCCCEEEECCCCCHHHHHHHHHHHHH------c----CCEEEEcCccCChhHHhhCCEEEEeCCCHHHHHHHH
Confidence 4332 125679999999999888888887753 1 267899999998888888988888899999999999
Q ss_pred HHHHHcCCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcCCCcccccCCCCCCCcccC
Q 018506 205 PLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCWSSDSYNPVPGVMEG 284 (355)
Q Consensus 205 ~ll~~~g~~~~~~g~~g~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gi~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 284 (355)
++|+.+|.+++++++++.+.+.|++.|.+.+....++.|++.++++.|++++++.+++..+...++..... .+.++
T Consensus 178 ~ll~~~g~~~~~~~~~~~~~~~K~~~n~~~~~~~~~~~Ea~~la~~~G~~~~~~~~~~~~~~~~s~~~~~~--~~~~l-- 253 (316)
T 2uyy_A 178 SCFQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTLAQVTGQSQQTLLDILNQGQLASIFLDQK--CQNIL-- 253 (316)
T ss_dssp HHHHHHEEEEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHSTTCCHHHHHH--HHHHH--
T ss_pred HHHHHhcCCEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcCCCCCHHHHHh--hHHhh--
Confidence 99999999999999999999999999999999999999999999999999999999999876655533211 12222
Q ss_pred CCCCCCCCCCcchhhHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHCCCCCCcHHHHHHHH
Q 018506 285 VPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENGHDSKDFSCVFQHY 348 (355)
Q Consensus 285 ~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~gv~~pi~~~~~~~~~~~~~~g~g~~d~~~~~~~~ 348 (355)
.++|.++++++.+.||++.+++++++.|+++|++++++++++++.+.|+|++||+++++++
T Consensus 254 ---~~~~~~g~~~~~~~kd~~~~~~~a~~~gv~~p~~~~v~~~~~~a~~~g~g~~d~~~~~~~~ 314 (316)
T 2uyy_A 254 ---QGNFKPDFYLKYIQKDLRLAIALGDAVNHPTPMAAAANEVYKRAKALDQSDNDMSAVYRAY 314 (316)
T ss_dssp ---HTCCCCSSBHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTTCTTSBGGGGGGGT
T ss_pred ---cCCCCCCCcHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHhcCCCccCHHHHHHHH
Confidence 3467889999999999999999999999999999999999999999999999999998854
No 16
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.4e-39 Score=302.51 Aligned_cols=275 Identities=15% Similarity=0.252 Sum_probs=226.8
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCC-CcEEEEeCCh-------hHHHHHHhCCCCCCC-CHHHHhhcCCEEEEeCCCchH
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAG-YKMAVHDVNC-------NVMKMFSDMGVPTKE-TPFEVAEASDVVITMLPSSSH 114 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G-~~V~v~dr~~-------~~~~~l~~~g~~~~~-s~~e~~~~aDiVi~~v~~~~~ 114 (355)
.+|||+|||+|.||.++|.+|+++| |+|++|||++ +..+.+.+.|+ ++ ++.++++++|+||+|||++..
T Consensus 23 M~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~--~~~s~~e~~~~aDvVi~avp~~~~ 100 (317)
T 4ezb_A 23 MMTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELGV--EPLDDVAGIACADVVLSLVVGAAT 100 (317)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTTC--EEESSGGGGGGCSEEEECCCGGGH
T ss_pred cCCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCCC--CCCCHHHHHhcCCEEEEecCCHHH
Confidence 3589999999999999999999999 9999999998 56667777777 66 889999999999999998765
Q ss_pred HHHHhcCCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCceEEeCCCCCChHHHhcCceEEEec
Q 018506 115 VLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVG 194 (355)
Q Consensus 115 ~~~vl~~~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~pv~g~~~~~~~g~~~~~~g 194 (355)
.+. +..+.+.+ .++++|||+||+.|.+.+.+.+.+.+ . +.+|+++|++|+ ..+..+++++++|
T Consensus 101 ~~~-~~~i~~~l-----~~~~ivv~~st~~p~~~~~~~~~l~~------~----g~~~~d~pv~g~-~~a~~g~l~i~vg 163 (317)
T 4ezb_A 101 KAV-AASAAPHL-----SDEAVFIDLNSVGPDTKALAAGAIAT------G----KGSFVEGAVMAR-VPPYAEKVPILVA 163 (317)
T ss_dssp HHH-HHHHGGGC-----CTTCEEEECCSCCHHHHHHHHHHHHT------S----SCEEEEEEECSC-STTTGGGSEEEEE
T ss_pred HHH-HHHHHhhc-----CCCCEEEECCCCCHHHHHHHHHHHHH------c----CCeEEeccCCCC-chhhcCCEEEEEe
Confidence 554 34333333 25679999999999999999888753 1 278999999986 4456778899999
Q ss_pred CCHHHHHHHHHHHHHcCCCeEEeCC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcC-CCcccc
Q 018506 195 GSEDAYQAAKPLFLSMGKNTIYCGG-AGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSS-ARCWSS 272 (355)
Q Consensus 195 g~~~~~~~v~~ll~~~g~~~~~~g~-~g~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gi~~~~~~~~~~~~~-~~s~~~ 272 (355)
|+++ +.++++|+.+|++++++|+ +|.++++|+++|.+.+..+++++|++.++++.|+|++ +++.+..+. +.+|.
T Consensus 164 g~~~--~~~~~ll~~~g~~v~~~g~~~g~a~~~Kl~~N~~~~~~~~~~~E~~~la~~~Gid~~-~~~~l~~~~~~~~~~- 239 (317)
T 4ezb_A 164 GRRA--VEVAERLNALGMNLEAVGETPGQASSLKMIRSVMIKGVEALLIEALSSAERAGVTER-ILDSVQETFPGLDWR- 239 (317)
T ss_dssp STTH--HHHHHHHHTTTCEEEEEESSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH-HHHHHHHHSTTSCHH-
T ss_pred CChH--HHHHHHHHHhCCCeEEeCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH-HHHHHHhcCccccHH-
Confidence 9877 8999999999999999998 8999999999999999999999999999999999995 555555543 23331
Q ss_pred cCCCCCCCcccCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhCCCChHHHHHHHH----HHHHHHCCCC-CCcHHHHHHH
Q 018506 273 DSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDI----YAKLCENGHD-SKDFSCVFQH 347 (355)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~gv~~pi~~~~~~~----~~~~~~~g~g-~~d~~~~~~~ 347 (355)
.. .+ ++..++|.++|. +.||++.+++++++.|+++|+++++.++ ++...+.|++ ++||+++++.
T Consensus 240 -~~--~~-----~~~~~~~~~g~~---~~KDl~~~~~~a~~~g~~~pl~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~ 308 (317)
T 4ezb_A 240 -DV--AD-----YYLSRTFEHGAR---RVTEMTEAAETIESFGLNAPMSRAACETIAAAHAAMKDQGLSVNDGYRGFVPV 308 (317)
T ss_dssp -HH--HH-----HHHHHHHHHHHH---HHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHTTSSCCTTSHHHHHHHH
T ss_pred -Hh--hh-----hhhcCCCCCCcc---hHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHH
Confidence 11 01 122446666665 5899999999999999999999999999 8888889997 9999999998
Q ss_pred HhcCC
Q 018506 348 YYGGK 352 (355)
Q Consensus 348 ~~~~~ 352 (355)
+....
T Consensus 309 ~~~~~ 313 (317)
T 4ezb_A 309 LARRL 313 (317)
T ss_dssp HHHHC
T ss_pred HHhhc
Confidence 87554
No 17
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=100.00 E-value=2.6e-38 Score=290.35 Aligned_cols=281 Identities=29% Similarity=0.444 Sum_probs=241.4
Q ss_pred CceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHHHHhcCCCc
Q 018506 45 FESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNGPNG 124 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl~~~~~ 124 (355)
||||+|||+|.||..++..|.+ ||+|++|||++++.+.+.+.|+..++ +.++++++|+||+|+|++..++.++..+.+
T Consensus 1 M~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~D~vi~~v~~~~~~~~v~~~l~~ 78 (289)
T 2cvz_A 1 MEKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTFEKALRHQEEFGSEAV-PLERVAEARVIFTCLPTTREVYEVAEALYP 78 (289)
T ss_dssp -CCEEEECCSTTHHHHHHHHHT-TSCEEEECSSTHHHHHHHHHHCCEEC-CGGGGGGCSEEEECCSSHHHHHHHHHHHTT
T ss_pred CCeEEEEcccHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHCCCcccC-HHHHHhCCCEEEEeCCChHHHHHHHHHHHh
Confidence 4799999999999999999999 99999999999999888876766665 778888999999999988778888755433
Q ss_pred cccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCceEEeCCCCCChHHHhcCceEEEecCCHHHHHHHH
Q 018506 125 LLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAAK 204 (355)
Q Consensus 125 ~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~pv~g~~~~~~~g~~~~~~gg~~~~~~~v~ 204 (355)
.+ .++++|+++|+..+...+.+.+.+.+ . +.+|+++|+++++.....+.+.++++++++.++.++
T Consensus 79 ~l-----~~~~~vv~~s~~~~~~~~~l~~~~~~------~----g~~~~~~p~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 143 (289)
T 2cvz_A 79 YL-----REGTYWVDATSGEPEASRRLAERLRE------K----GVTYLDAPVSGGTSGAEAGTLTVMLGGPEEAVERVR 143 (289)
T ss_dssp TC-----CTTEEEEECSCCCHHHHHHHHHHHHT------T----TEEEEECCEESHHHHHHHTCEEEEEESCHHHHHHHG
T ss_pred hC-----CCCCEEEECCCCCHHHHHHHHHHHHH------c----CCEEEEecCCCChhHHhhCCeEEEECCCHHHHHHHH
Confidence 33 25689999999998888888887753 1 267889999888887888888888899999999999
Q ss_pred HHHHHcCCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcCCCcccccCCCCCC-Cccc
Q 018506 205 PLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCWSSDSYNPVP-GVME 283 (355)
Q Consensus 205 ~ll~~~g~~~~~~g~~g~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gi~~~~~~~~~~~~~~~s~~~~~~~~~~-~~~~ 283 (355)
++| .+|.+++++++.+.+.+.|+++|.+...+..++.|++.++++.|++++++.+++..+...++..... .+ .+
T Consensus 144 ~ll-~~g~~~~~~~~~~~~~~~k~~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~s~~~~~~--~~~~~-- 218 (289)
T 2cvz_A 144 PFL-AYAKKVVHVGPVGAGHAVKAINNALLAVNLWAAGEGLLALVKQGVSAEKALEVINASSGRSNATENL--IPQRV-- 218 (289)
T ss_dssp GGC-TTEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTTSTTCBHHHHHT--HHHHT--
T ss_pred HHH-hhcCCeEEcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcCHHHHHHHHHccCCCCHHHHHh--ccchh--
Confidence 999 9998888999999999999999999999999999999999999999999999998876555433211 11 12
Q ss_pred CCCCCCCCCCCcchhhHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHCCCCCCcHHHHHHHHhc
Q 018506 284 GVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENGHDSKDFSCVFQHYYG 350 (355)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~gv~~pi~~~~~~~~~~~~~~g~g~~d~~~~~~~~~~ 350 (355)
..+++.++++++.+.||++.+++.++++|+++|++++++++++++.+.|+|+.||+++++.+.+
T Consensus 219 ---l~~~~~~g~~~~~~~kd~~~~~~~a~~~gv~~p~~~~v~~~~~~a~~~g~~~~d~~~~~~~~~~ 282 (289)
T 2cvz_A 219 ---LTRAFPKTFALGLLVKDLGIAMGVLDGEKAPSPLLRLAREVYEMAKRELGPDADHVEALRLLER 282 (289)
T ss_dssp ---TTSCCCCSSBHHHHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHCTTSBGGGGHHHHHH
T ss_pred ---hcCCCCCCcChHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHcCCCccCHHHHHHHHHH
Confidence 2457788999999999999999999999999999999999999999999999999999997754
No 18
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=100.00 E-value=1.7e-38 Score=294.77 Aligned_cols=267 Identities=20% Similarity=0.239 Sum_probs=221.6
Q ss_pred CCCceEEEEcccHHhHHHHHHHHHCCC-cEEEEeCC--hhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHHHHh
Q 018506 43 CQFESVGFIGLGNMGFRMASNLMKAGY-KMAVHDVN--CNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVY 119 (355)
Q Consensus 43 ~~~mkIgiIG~G~mG~~ia~~L~~~G~-~V~v~dr~--~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl 119 (355)
+.+|||+|||+|.||.+|+.+|+++|| +|++|||+ +++.+.+.+.|+..++++.++++++|+||+|||++...+ ++
T Consensus 22 ~~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~-~~ 100 (312)
T 3qsg_A 22 SNAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEELGVSCKASVAEVAGECDVIFSLVTAQAALE-VA 100 (312)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHHTTCEECSCHHHHHHHCSEEEECSCTTTHHH-HH
T ss_pred CCCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHHCCCEEeCCHHHHHhcCCEEEEecCchhHHH-HH
Confidence 457899999999999999999999999 99999997 588888888898888999999999999999999875544 45
Q ss_pred cCCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCceEEeCCCCCChHHHhcCceEEEecCCHHH
Q 018506 120 NGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDA 199 (355)
Q Consensus 120 ~~~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~pv~g~~~~~~~g~~~~~~gg~~~~ 199 (355)
.++.+.+ .++++|||+||+.|.+.+.+.+.+.+. .. +.+|+++|++|+.... .+.+++++||+++
T Consensus 101 ~~l~~~l-----~~~~ivvd~st~~~~~~~~~~~~~~~~----~~----g~~~vd~pv~g~~~~~-~g~l~i~vgg~~~- 165 (312)
T 3qsg_A 101 QQAGPHL-----CEGALYADFTSCSPAVKRAIGDVISRH----RP----SAQYAAVAVMSAVKPH-GHRVPLVVDGDGA- 165 (312)
T ss_dssp HHHGGGC-----CTTCEEEECCCCCHHHHHHHHHHHHHH----CT----TCEEEEEEECSCSTTT-GGGSEEEEESTTH-
T ss_pred HhhHhhc-----CCCCEEEEcCCCCHHHHHHHHHHHHhh----cC----CCeEEeccccCCchhh-cCCEEEEecCChH-
Confidence 4433333 256799999999999999988877541 11 2789999999876544 7788999999877
Q ss_pred HHHHHHHHHHcCCCeEEeCC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcCCCcccccCCCCC
Q 018506 200 YQAAKPLFLSMGKNTIYCGG-AGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCWSSDSYNPV 278 (355)
Q Consensus 200 ~~~v~~ll~~~g~~~~~~g~-~g~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gi~~~~~~~~~~~~~~~s~~~~~~~~~ 278 (355)
+.++++|+.+|++++++++ +|++.++|+++|.+.+..+++++|++.++++.|+|+ ++++.+..+. .++....+.
T Consensus 166 -~~~~~ll~~~g~~~~~~g~~~g~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gld~-~~~~~l~~~~-~~~~~~~~~-- 240 (312)
T 3qsg_A 166 -RRFQAAFTLYGCRIEVLDGEVGGAALLKMCRSAVLKGLEALFLEALAAAEKMGLAD-RVLASLDASF-PEHHLRDLA-- 240 (312)
T ss_dssp -HHHHHHHHTTTCEEEECCSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHH-HHHHHHHHHS-GGGTHHHHH--
T ss_pred -HHHHHHHHHhCCCeEEcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH-HHHHHHHhcC-CchhHHHhh--
Confidence 8999999999999999998 899999999999999999999999999999999999 5778887764 233222111
Q ss_pred CCcccCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHCCCCC
Q 018506 279 PGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENGHDS 338 (355)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~gv~~pi~~~~~~~~~~~~~~g~g~ 338 (355)
+ .+..++|.++|.+ .||++.+++++++.|+++|+++.+.++|+++.+.|+++
T Consensus 241 ~-----~~~~~~~~~g~~~---~KDl~~~~~~a~~~g~~~pl~~~~~~~~~~~~~~g~~~ 292 (312)
T 3qsg_A 241 L-----YLVERNLEHADRR---AHELGEVAATLCSVGVEPLVAEAGYRRLTRVAQVRAAL 292 (312)
T ss_dssp H-----HHHHHHHHHHHHH---HHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHC
T ss_pred h-----HhhcCCCCcccch---HHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHhcCCcc
Confidence 1 1234567777764 79999999999999999999999999999999998766
No 19
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=100.00 E-value=6e-36 Score=281.42 Aligned_cols=280 Identities=23% Similarity=0.360 Sum_probs=225.6
Q ss_pred CCCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcC---CEEEEeCCCchHHHHHh
Q 018506 43 CQFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEAS---DVVITMLPSSSHVLDVY 119 (355)
Q Consensus 43 ~~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~a---DiVi~~v~~~~~~~~vl 119 (355)
+++|||+|||+|.||.+||.+|+++||+|++|||++++++.+.+.|+..+++++++++.+ |+||+|||++ .+++++
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~~vp~~-~v~~vl 98 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWLMVPAA-VVDSML 98 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEECSCGG-GHHHHH
T ss_pred hcCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEEeCCHH-HHHHHH
Confidence 345899999999999999999999999999999999999999999999999999999988 9999999988 889988
Q ss_pred cCCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCceEEeCCCCCChHHHhcCceEEEecCCHHH
Q 018506 120 NGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDA 199 (355)
Q Consensus 120 ~~~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~pv~g~~~~~~~g~~~~~~gg~~~~ 199 (355)
..+.+.+. ++++|||+||+.|...+++.+.+.+ . +++|+++|++|++..+..|+ .+|+||++++
T Consensus 99 ~~l~~~l~-----~g~iiId~st~~~~~~~~~~~~l~~------~----g~~~vdapVsGg~~~a~~G~-~im~GG~~~a 162 (358)
T 4e21_A 99 QRMTPLLA-----ANDIVIDGGNSHYQDDIRRADQMRA------Q----GITYVDVGTSGGIFGLERGY-CLMIGGEKQA 162 (358)
T ss_dssp HHHGGGCC-----TTCEEEECSSCCHHHHHHHHHHHHT------T----TCEEEEEEEECGGGHHHHCC-EEEEESCHHH
T ss_pred HHHHhhCC-----CCCEEEeCCCCChHHHHHHHHHHHH------C----CCEEEeCCCCCCHHHHhcCC-eeeecCCHHH
Confidence 76544442 5679999999999999998887753 1 37899999999999999998 9999999999
Q ss_pred HHHHHHHHHHcC--------------------CCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--------
Q 018506 200 YQAAKPLFLSMG--------------------KNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSL-------- 251 (355)
Q Consensus 200 ~~~v~~ll~~~g--------------------~~~~~~g~~g~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~-------- 251 (355)
++.++++|+.++ ..++++|+.|+|+.+|+++|.+.+..+++++|++.++++.
T Consensus 163 ~~~~~~ll~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~G~~G~g~~~Kl~~n~l~~~~i~~~aE~~~la~~a~~~~~~~~ 242 (358)
T 4e21_A 163 VERLDPVFRTLAPGIGAAPRTPGREKREGTAELGYLHCGPSGAGHFVKMVHNGIEYGLMAAYAEGLNILHHANAGKEGQG 242 (358)
T ss_dssp HHHTHHHHHHHSCCGGGSCCCTTGGGCCSSGGGTEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCC-----
T ss_pred HHHHHHHHHHhccccccCcccccccccccccccceEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccc
Confidence 999999999999 5789999999999999999999999999999999999998
Q ss_pred ----------------CCCHHHHHHHHHhcC-CCcccccCCCCCCCcccCCCCCCCCCCCc-chhhHHHH---HHHHHHH
Q 018506 252 ----------------GISASTLTKILNSSS-ARCWSSDSYNPVPGVMEGVPASRNYGGGF-ASKLMAKD---LNLALAS 310 (355)
Q Consensus 252 ----------------Gi~~~~~~~~~~~~~-~~s~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~kd---~~~~~~~ 310 (355)
|+|.+++.++++.++ ..||..+... ..+... |.+ .+....|| .++++..
T Consensus 243 ~~~~~~~~~~~~~~~~~~d~~~i~~~~~~g~~~~s~~l~~~~---~~~~~~-------p~~~~~~~~~~d~g~~r~~~~~ 312 (358)
T 4e21_A 243 ADAETAPLRNPDFYRYDLDLADITEVWRRGSVISSWLLDLSA---TALLDS-------PDLQEFQGRVSDSGEGRWTVAA 312 (358)
T ss_dssp ---------CGGGCCCCCCHHHHHHHHTTTSTTCBHHHHHHH---HHHHHC-------TTCTTC--CCCCCSHHHHHHHH
T ss_pred ccccccccccchhcccCCCHHHHHHHHhCccHHHHHHHHHHH---HHHhhC-------CChHHHHHHHHhcCcHHHHHHH
Confidence 899999999999987 6888765321 111111 111 01122223 3679999
Q ss_pred HHHhCCCChHHHHHHHHHHHHHHCCCCCCcHHH-HHHH---HhcCCC
Q 018506 311 AKEVGVDCPLTSQAQDIYAKLCENGHDSKDFSC-VFQH---YYGGKD 353 (355)
Q Consensus 311 a~~~gv~~pi~~~~~~~~~~~~~~g~g~~d~~~-~~~~---~~~~~~ 353 (355)
|.+.|+|+|++.++ ++.+...+ ++.+++. ++.. +|+++.
T Consensus 313 A~~~gvp~p~~~~a--l~~~~~s~--~~~~~~~~l~~a~r~~fG~h~ 355 (358)
T 4e21_A 313 AIDEGVPAHVLSSA--LYERFSSR--GEDDFANRLLSAMRYEFGGHR 355 (358)
T ss_dssp HHHHTCCCHHHHHH--HHHHHHHT--TTTHHHHHHHHHHC-------
T ss_pred HHHcCCChHHHHHH--HHHHHHHC--CCcccHHHHHHHHHHhcCCCC
Confidence 99999999999875 45555553 5556543 5543 455543
No 20
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=100.00 E-value=1.5e-35 Score=287.48 Aligned_cols=266 Identities=18% Similarity=0.249 Sum_probs=216.6
Q ss_pred CCCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCC---CC--CCCCHHHHhh---cCCEEEEeCCCchH
Q 018506 43 CQFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMG---VP--TKETPFEVAE---ASDVVITMLPSSSH 114 (355)
Q Consensus 43 ~~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g---~~--~~~s~~e~~~---~aDiVi~~v~~~~~ 114 (355)
+.+|+|||||+|.||.+||.+|+++||+|++|||++++++.+.+.+ .. .+.+++|+++ .+|+||++||.++.
T Consensus 2 ~~~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~g~~i~~~~s~~e~v~~l~~aDvVil~Vp~~~~ 81 (484)
T 4gwg_A 2 NAQADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVVGAQSLKEMVSKLKKPRRIILLVKAGQA 81 (484)
T ss_dssp -CCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHTBCSSCEEEECSCSSHH
T ss_pred CCCCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcccCCCceeccCCHHHHHhhccCCCEEEEecCChHH
Confidence 4578999999999999999999999999999999999999988753 22 3678999887 49999999999888
Q ss_pred HHHHhcCCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCceEEeCCCCCChHHHhcCceEEEec
Q 018506 115 VLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVG 194 (355)
Q Consensus 115 ~~~vl~~~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~pv~g~~~~~~~g~~~~~~g 194 (355)
+++++.++.+.+. ++++|||+||+.|..+.++.+.+.+ . +++|+++|++|++..+..|+ .+|+|
T Consensus 82 v~~vl~~l~~~L~-----~g~iIId~st~~~~~t~~~~~~l~~------~----Gi~fvd~pVsGg~~gA~~G~-~im~G 145 (484)
T 4gwg_A 82 VDDFIEKLVPLLD-----TGDIIIDGGNSEYRDTTRRCRDLKA------K----GILFVGSGVSGGEEGARYGP-SLMPG 145 (484)
T ss_dssp HHHHHHHHGGGCC-----TTCEEEECSCCCHHHHHHHHHHHHH------T----TCEEEEEEEESHHHHHHHCC-EEEEE
T ss_pred HHHHHHHHHHhcC-----CCCEEEEcCCCCchHHHHHHHHHHh------h----ccccccCCccCCHHHHhcCC-eeecC
Confidence 9998876555543 5679999999999888888777653 2 37999999999999999999 99999
Q ss_pred CCHHHHHHHHHHHHHcCCCe-------EEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHH---H
Q 018506 195 GSEDAYQAAKPLFLSMGKNT-------IYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQS-LGISASTLTKIL---N 263 (355)
Q Consensus 195 g~~~~~~~v~~ll~~~g~~~-------~~~g~~g~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~-~Gi~~~~~~~~~---~ 263 (355)
|++++++.++++|+.++.++ +++|+.|+|+.+||++|.+.+..+++++|++.++++ .|+|++++.+++ +
T Consensus 146 G~~ea~~~v~pll~~ig~~v~~~~~~~~~~G~~Gag~~vKmv~N~i~~~~m~~iaEa~~l~~~~~Gld~~~l~~v~~~w~ 225 (484)
T 4gwg_A 146 GNKEAWPHIKTIFQGIAAKVGTGEPCCDWVGDEGAGHFVKMVHNGIEYGDMQLICEAYHLMKDVLGMAQDEMAQAFEDWN 225 (484)
T ss_dssp ECGGGHHHHHHHHHHHSCBCTTSCBSBCCCEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHhcCcccCCCceEEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHc
Confidence 99999999999999999887 899999999999999999999999999999999999 999999998886 5
Q ss_pred hcCCCcccccCCCCCCCcccCCCCCCCCCCCcchhhHH-----HHH-HHHHHHHHHhCCCCh-HHHHHHHHHHHH
Q 018506 264 SSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMA-----KDL-NLALASAKEVGVDCP-LTSQAQDIYAKL 331 (355)
Q Consensus 264 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----kd~-~~~~~~a~~~gv~~p-i~~~~~~~~~~~ 331 (355)
.+.+.||..+...+. +..+|+.+++.++... |+. .+..+.|.++|+|+| +.+++...+...
T Consensus 226 ~G~~~S~l~e~~~~~-------l~~~D~~g~~~ld~i~d~~~~kgtG~wt~~~A~~~gvp~p~i~~av~~R~~S~ 293 (484)
T 4gwg_A 226 KTELDSFLIEITANI-------LKFQDTDGKHLLPKIRDSAGQKGTGKWTAISALEYGVPVTLIGEAVFARCLSS 293 (484)
T ss_dssp TTTTCBHHHHHHHHH-------HHCBCTTSSBSGGGSCCCCCSSCTTHHHHHHHHHHTCCCHHHHHHHHHHHHHH
T ss_pred CCCccchHHHHHHHH-------HhcCCccCCccHHHHhccccCcchHHHHHHHHHHcCCCchHHHHHHHHHHHhh
Confidence 777888876544211 1122333333333322 333 245778899999999 555565666554
No 21
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.4e-34 Score=278.41 Aligned_cols=258 Identities=19% Similarity=0.259 Sum_probs=221.1
Q ss_pred CceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHh-----CCCCCCCCHHHHhhc---CCEEEEeCCCchHHH
Q 018506 45 FESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSD-----MGVPTKETPFEVAEA---SDVVITMLPSSSHVL 116 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~-----~g~~~~~s~~e~~~~---aDiVi~~v~~~~~~~ 116 (355)
..+|||||+|.||++||.+|+++||+|++|||++++++.+.+ .|+..+.++.++++. +|+||++||+++.++
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~ 89 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQSKVDHFLANEAKGKSIIGATSIEDFISKLKRPRKVMLLVKAGAPVD 89 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSHHHHHHHHTTTTTSSEECCSSHHHHHHTSCSSCEEEECCCSSHHHH
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHcccccCCCeEEeCCHHHHHhcCCCCCEEEEEcCChHHHH
Confidence 468999999999999999999999999999999999999987 577788899998877 999999999988999
Q ss_pred HHhcCCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCceEEeCCCCCChHHHhcCceEEEecCC
Q 018506 117 DVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGS 196 (355)
Q Consensus 117 ~vl~~~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~pv~g~~~~~~~g~~~~~~gg~ 196 (355)
+++.++.+.+. ++++|||++++.+..++++.+.+.+ . +++|+++|+++++..+..|+ .+++||+
T Consensus 90 ~vl~~l~~~l~-----~g~iIId~s~~~~~~~~~l~~~l~~------~----g~~~v~~pVsgg~~~a~~G~-~im~gg~ 153 (497)
T 2p4q_A 90 ALINQIVPLLE-----KGDIIIDGGNSHFPDSNRRYEELKK------K----GILFVGSGVSGGEEGARYGP-SLMPGGS 153 (497)
T ss_dssp HHHHHHGGGCC-----TTCEEEECSCCCHHHHHHHHHHHHH------T----TCEEEEEEEESHHHHHHHCC-EEEEEEC
T ss_pred HHHHHHHHhCC-----CCCEEEECCCCChhHHHHHHHHHHH------c----CCceeCCCcccChhHhhcCC-eEEecCC
Confidence 99876554442 5679999999999988888877653 1 27899999999999999999 8899999
Q ss_pred HHHHHHHHHHHHHcCCC------eEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHH---hcC
Q 018506 197 EDAYQAAKPLFLSMGKN------TIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQS-LGISASTLTKILN---SSS 266 (355)
Q Consensus 197 ~~~~~~v~~ll~~~g~~------~~~~g~~g~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~-~Gi~~~~~~~~~~---~~~ 266 (355)
+++++.++++|+.++.+ ++++|+.|.+.++|+++|.+.+..+++++|++.++++ .|++++++.+++. .+.
T Consensus 154 ~e~~~~v~~ll~~~g~~~dGe~~v~~vg~~G~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~lGl~~~~~~~~~~~w~~g~ 233 (497)
T 2p4q_A 154 EEAWPHIKNIFQSISAKSDGEPCCEWVGPAGAGHYVKMVHNGIEYGDMQLICEAYDIMKRLGGFTDKEISDVFAKWNNGV 233 (497)
T ss_dssp GGGHHHHHHHHHHHSCEETTEESCCCCEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHhcCccCCCCceEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHhcCCc
Confidence 99999999999999987 7899989999999999999999999999999999999 6999999999984 566
Q ss_pred CCcccccCCCCCCCcccCCCCCCCCCCCcchhhHH-----HHHH-HHHHHHHHhCCCChHHHHHH
Q 018506 267 ARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMA-----KDLN-LALASAKEVGVDCPLTSQAQ 325 (355)
Q Consensus 267 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----kd~~-~~~~~a~~~gv~~pi~~~~~ 325 (355)
+.||..+...+ .+..++|.+++.++.+. ||++ .+.+.+++.|+++|++..+.
T Consensus 234 ~~S~l~~~~~~-------~l~~~d~~~~~~vd~i~D~~~~KgtG~~~~~~A~~~Gv~~P~~~~av 291 (497)
T 2p4q_A 234 LDSFLVEITRD-------ILKFDDVDGKPLVEKIMDTAGQKGTGKWTAINALDLGMPVTLIGEAV 291 (497)
T ss_dssp TCBHHHHHHHH-------HHTCBCTTSSBGGGGSCCCCCCCSHHHHHHHHHHHHTCCCHHHHHHH
T ss_pred cccHHHHHHHH-------HHhcCCCCCccHHHHHHHhhccchHHHHHHHHHHHcCCCCchHHHHH
Confidence 67776543321 12245665567888777 8876 78999999999999998864
No 22
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=100.00 E-value=2e-32 Score=263.72 Aligned_cols=261 Identities=15% Similarity=0.178 Sum_probs=210.7
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhC--------------------CCCCCCCHHHHhhcCC
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDM--------------------GVPTKETPFEVAEASD 103 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~--------------------g~~~~~s~~e~~~~aD 103 (355)
..-+|+|||+|.||.++|..|+++||+|++|||++++++.+++. ++.+++++.+++++||
T Consensus 7 ~~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~~aD 86 (446)
T 4a7p_A 7 GSVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEGVKDAD 86 (446)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHTTCS
T ss_pred CceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHHHhcCC
Confidence 34689999999999999999999999999999999999998763 1356788999999999
Q ss_pred EEEEeCCCch----------HHHHHhcCCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCceEE
Q 018506 104 VVITMLPSSS----------HVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVML 173 (355)
Q Consensus 104 iVi~~v~~~~----------~~~~vl~~~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~ 173 (355)
+||+|||++. .+++++..+.+.++ ++++||++||+.|.+++++.+.+.+.. .+ .++.+.
T Consensus 87 vvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~-----~g~iVV~~STv~pgtt~~l~~~l~e~~----~~--~d~~v~ 155 (446)
T 4a7p_A 87 AVFIAVGTPSRRGDGHADLSYVFAAAREIAENLT-----KPSVIVTKSTVPVGTGDEVERIIAEVA----PN--SGAKVV 155 (446)
T ss_dssp EEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCC-----SCCEEEECSCCCTTHHHHHHHHHHHHS----TT--SCCEEE
T ss_pred EEEEEcCCCCccccCCccHHHHHHHHHHHHHhcC-----CCCEEEEeCCCCchHHHHHHHHHHHhC----CC--CCceEE
Confidence 9999999885 58888766544442 567999999999999999988776421 11 246788
Q ss_pred eCCCCCChHHH---hcCceEEEecCC-HHHHHHHHHHHHHcCCC---eEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHH
Q 018506 174 DAPVSGGVLAA---EAGTLTFMVGGS-EDAYQAAKPLFLSMGKN---TIYCGGAGNGAAAKICNNLTMAVSMLGVSEALT 246 (355)
Q Consensus 174 ~~pv~g~~~~~---~~g~~~~~~gg~-~~~~~~v~~ll~~~g~~---~~~~g~~g~a~~~Kl~~n~~~~~~~~~~~Ea~~ 246 (355)
.+|.+..+..+ ......+++|++ +++.+.++++|+.++.. ++++++++.++..|+++|.+.+..+++++|+..
T Consensus 156 ~~Pe~a~eG~a~~d~~~p~~ivvG~~~~~~~~~~~~ly~~~~~~~~~~~~~~d~~~aE~~Kl~~N~~~a~~ia~~nE~~~ 235 (446)
T 4a7p_A 156 SNPEFLREGAAIEDFKRPDRVVVGTEDEFARQVMREIYRPLSLNQSAPVLFTGRRTSELIKYAANAFLAVKITFINEIAD 235 (446)
T ss_dssp ECCCCCCTTSHHHHHHSCSCEEEECSCHHHHHHHHHHHCSCC-----CEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eCcccccccchhhhccCCCEEEEeCCcHHHHHHHHHHHHHHhcCCCeEEEeCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88876433322 122226777775 88999999999999875 588899999999999999999999999999999
Q ss_pred HHHHcCCCHHHHHHHHHhcCCCcccccCCCCCCCcccCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhCCCChHHHHHHH
Q 018506 247 LGQSLGISASTLTKILNSSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQD 326 (355)
Q Consensus 247 la~~~Gi~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~gv~~pi~~~~~~ 326 (355)
+|+++|+|++++.++++....-.| ..+ ..++||+..++.||+.++.+.|++.|+++|+++++.+
T Consensus 236 l~~~~GiD~~~v~~~~~~~~rig~--~~l--------------~pg~G~gg~c~~KD~~~l~~~A~~~g~~~~l~~~~~~ 299 (446)
T 4a7p_A 236 LCEQVGADVQEVSRGIGMDNRIGG--KFL--------------HAGPGYGGSCFPKDTLALMKTAADNETPLRIVEATVQ 299 (446)
T ss_dssp HHHHTTCCHHHHHHHHHTSTTC-----CC--------------CCCSCCCTTTHHHHHHHHHHHHHHTTCCCHHHHHHHH
T ss_pred HHHHcCCCHHHHHHHHhcCCCCCC--ccC--------------CCCCCcchhhHHHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 999999999999999987531111 000 2245788999999999999999999999999999988
Q ss_pred HHHHH
Q 018506 327 IYAKL 331 (355)
Q Consensus 327 ~~~~~ 331 (355)
+.+.-
T Consensus 300 iN~~~ 304 (446)
T 4a7p_A 300 VNDAR 304 (446)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77653
No 23
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=100.00 E-value=1.5e-33 Score=274.97 Aligned_cols=260 Identities=18% Similarity=0.279 Sum_probs=216.5
Q ss_pred CCCCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhC----CCCCCCCHHHHhhc---CCEEEEeCCCchH
Q 018506 42 SCQFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDM----GVPTKETPFEVAEA---SDVVITMLPSSSH 114 (355)
Q Consensus 42 ~~~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~----g~~~~~s~~e~~~~---aDiVi~~v~~~~~ 114 (355)
.++.++|+|||+|.||++||.+|+++||+|++|||++++++.+.+. |+..++++++++++ +|+||++||+++.
T Consensus 12 ~~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~ 91 (480)
T 2zyd_A 12 HMSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVIAENPGKKLVPYYTVKEFVESLETPRRILLMVKAGAG 91 (480)
T ss_dssp ---CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHSTTSCEEECSSHHHHHHTBCSSCEEEECSCSSSH
T ss_pred ccCCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHhhCCCCCeEEeCCHHHHHhCCCCCCEEEEECCCHHH
Confidence 3677899999999999999999999999999999999999998864 67778899999887 9999999999778
Q ss_pred HHHHhcCCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCceEEeCCCCCChHHHhcCceEEEec
Q 018506 115 VLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVG 194 (355)
Q Consensus 115 ~~~vl~~~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~pv~g~~~~~~~g~~~~~~g 194 (355)
+++++.++.+.+. ++++|||++++.+..++++.+.+.+ . +++|+++|+++++..+..|+ .+++|
T Consensus 92 v~~vl~~l~~~l~-----~g~iIId~s~g~~~~t~~l~~~l~~------~----g~~~v~~pv~gg~~~a~~g~-~i~~g 155 (480)
T 2zyd_A 92 TDAAIDSLKPYLD-----KGDIIIDGGNTFFQDTIRRNRELSA------E----GFNFIGTGVSGGEEGALKGP-SIMPG 155 (480)
T ss_dssp HHHHHHHHGGGCC-----TTCEEEECSCCCHHHHHHHHHHHHH------T----TCEEEEEEEESHHHHHHHCC-EEEEE
T ss_pred HHHHHHHHHhhcC-----CCCEEEECCCCCHHHHHHHHHHHHH------C----CCCeeCCccccCHhHHhcCC-eEEec
Confidence 9999876554442 4679999999999888888777753 1 27889999999999888999 89999
Q ss_pred CCHHHHHHHHHHHHHcCCC-------eEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHH---
Q 018506 195 GSEDAYQAAKPLFLSMGKN-------TIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQS-LGISASTLTKILN--- 263 (355)
Q Consensus 195 g~~~~~~~v~~ll~~~g~~-------~~~~g~~g~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~-~Gi~~~~~~~~~~--- 263 (355)
|+++.++.++++|+.++.+ +.++|+.|.+.++|+++|.+.+..+++++|++.++++ .|++++++.+++.
T Consensus 156 g~~~~~~~v~~ll~~~g~~~~dGe~~v~~~g~~G~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~lGl~~~~~~~l~~~w~ 235 (480)
T 2zyd_A 156 GQKEAYELVAPILTKIAAVAEDGEPCVTYIGADGAGHYVKMVHNGIEYGDMQLIAEAYSLLKGGLNLTNEELAQTFTEWN 235 (480)
T ss_dssp SCHHHHHHHHHHHHHHSCBCTTSCBSBCCCBSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhccccCCCceEEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHhc
Confidence 9999999999999999987 7899999999999999999999999999999999999 6999999998884
Q ss_pred hcCCCcccccCCCCCCCcccCCCCCCCCCCCcchhhHH-----HHHH-HHHHHHHHhCCCChHHHHH
Q 018506 264 SSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMA-----KDLN-LALASAKEVGVDCPLTSQA 324 (355)
Q Consensus 264 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----kd~~-~~~~~a~~~gv~~pi~~~~ 324 (355)
.+...+|......+ + ..+++|.+++.++... |+.+ .+.+.+++.|+++|+++.+
T Consensus 236 ~g~~~s~l~~~~~~---~----l~~~d~~~~~~v~~i~D~~~~k~tG~~~~~~A~~~gv~~Pi~~~a 295 (480)
T 2zyd_A 236 NGELSSYLIDITKD---I----FTKKDEDGNYLVDVILDEAANKGTGKWTSQSALDLGEPLSLITES 295 (480)
T ss_dssp HTTTCBHHHHHHHH---H----HHCBCTTSSBGGGGBCCCCCCCSCTTHHHHHHHHHTCCCHHHHHH
T ss_pred CCCcccHHHHHHHH---H----HhcCCCCCcchHHHHHHHhcCchHHHHHHHHHHHcCCCCchHHHH
Confidence 46566665432221 1 1134565556666544 4444 7889999999999999986
No 24
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=100.00 E-value=1.8e-32 Score=265.56 Aligned_cols=263 Identities=16% Similarity=0.142 Sum_probs=206.1
Q ss_pred CCCceEEEEcccHHhHHHHHHHHHC-CC-cEEEEeCChh----HHHHHHhC---------------------C-CCCCCC
Q 018506 43 CQFESVGFIGLGNMGFRMASNLMKA-GY-KMAVHDVNCN----VMKMFSDM---------------------G-VPTKET 94 (355)
Q Consensus 43 ~~~mkIgiIG~G~mG~~ia~~L~~~-G~-~V~v~dr~~~----~~~~l~~~---------------------g-~~~~~s 94 (355)
+.+|||+|||+|.||.++|..|+++ || +|++||++++ +++.+++. + +..+++
T Consensus 16 ~~~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~ttd 95 (478)
T 3g79_A 16 GPIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFECTPD 95 (478)
T ss_dssp CSCCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEEESC
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEEeCc
Confidence 3568999999999999999999999 99 9999999999 99888752 1 223344
Q ss_pred HHHHhhcCCEEEEeCCCch-----------HHHHHhcCCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhc
Q 018506 95 PFEVAEASDVVITMLPSSS-----------HVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEK 163 (355)
Q Consensus 95 ~~e~~~~aDiVi~~v~~~~-----------~~~~vl~~~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~~~~~~~ 163 (355)
.+++++||+||+|||++. .+..+...+.+.++ ++++||++||+.|.+++++.+.+.+. ..
T Consensus 96 -~ea~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~-----~g~iVV~~STv~pgtt~~v~~~ile~---~~ 166 (478)
T 3g79_A 96 -FSRISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLK-----PGMLVVLESTITPGTTEGMAKQILEE---ES 166 (478)
T ss_dssp -GGGGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCC-----TTCEEEECSCCCTTTTTTHHHHHHHH---HH
T ss_pred -HHHHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcC-----CCcEEEEeCCCChHHHHHHHHHHHHH---hc
Confidence 678899999999999873 24444443333332 56799999999999999988754311 01
Q ss_pred cC-CCCCceEEeCCCCCChHHHhcC---ceEEEecCCHHHHHHHHHHHHHc-CCCeEEeCCcchHHHHHHHHHHHHHHHH
Q 018506 164 KD-SWENPVMLDAPVSGGVLAAEAG---TLTFMVGGSEDAYQAAKPLFLSM-GKNTIYCGGAGNGAAAKICNNLTMAVSM 238 (355)
Q Consensus 164 ~g-~~~~~~~~~~pv~g~~~~~~~g---~~~~~~gg~~~~~~~v~~ll~~~-g~~~~~~g~~g~a~~~Kl~~n~~~~~~~ 238 (355)
+. ....+.++++|.+..+..+..+ ...++.|++++.++.++++|+.+ +..+++++++++|+..|+++|.+.+..+
T Consensus 167 g~~~~~d~~v~~~Pe~~~~G~a~~~~~~~~~Iv~G~~~~~~~~~~~ly~~~~~~~~~~~~~~~~aE~~Kl~~N~~~a~~I 246 (478)
T 3g79_A 167 GLKAGEDFALAHAPERVMVGRLLKNIREHDRIVGGIDEASTKRAVELYSPVLTVGQVIPMSATAAEVTKTAENTFRDLQI 246 (478)
T ss_dssp CCCBTTTBEEEECCCCCCTTSHHHHHHHSCEEEEESSHHHHHHHHHHHGGGCSSCCEEEEEHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcCCceeEEeCCccCCccchhhhhcCCcEEEEeCCHHHHHHHHHHHhhhccCCeEEeCCHHHHHHHHHHHHHHHHHHH
Confidence 10 0123689999988555444332 23688899999999999999999 7889999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHhcCCCcccccCCCCCCCcccCCCCCCCCCCC--cchhhHHHHHHHHHHHHHHhCC
Q 018506 239 LGVSEALTLGQSLGISASTLTKILNSSSARCWSSDSYNPVPGVMEGVPASRNYGGG--FASKLMAKDLNLALASAKEVGV 316 (355)
Q Consensus 239 ~~~~Ea~~la~~~Gi~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~kd~~~~~~~a~~~gv 316 (355)
++++|+..+|++.|+|.+++.++++... .. ++....|.|| |+..|+.||+.++.+.+++.|+
T Consensus 247 a~~nE~~~l~e~~GiD~~~v~~~~~~~~----~~------------ri~~~~~~PG~G~GG~c~~KD~~~l~~~a~~~g~ 310 (478)
T 3g79_A 247 AAINQLALYCEAMGINVYDVRTGVDSLK----GE------------GITRAVLWPGAGVGGHCLTKDTYHLERGVKIGRG 310 (478)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHTSC----CS------------SSCCCCCCCCSCCCSSHHHHHHHHHHHHHTTSSC
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHCCCc----hh------------hhccccCCCCCCcchhhHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999999998632 10 0112245554 5678999999999999999998
Q ss_pred C-------ChHHHHHHHHHHH
Q 018506 317 D-------CPLTSQAQDIYAK 330 (355)
Q Consensus 317 ~-------~pi~~~~~~~~~~ 330 (355)
+ +++++++.++.+.
T Consensus 311 ~~~~~~~~~~li~~~~~iN~~ 331 (478)
T 3g79_A 311 ELDYPEGADSIYVLARKVNDF 331 (478)
T ss_dssp CCCCCSSCCCHHHHHHHHHHH
T ss_pred CcccccchhHHHHHHHHHHHH
Confidence 7 8999998876554
No 25
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=100.00 E-value=4.3e-31 Score=255.75 Aligned_cols=262 Identities=16% Similarity=0.181 Sum_probs=209.0
Q ss_pred ceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhC--------------------CCCCCCCHHHHhhcCCEE
Q 018506 46 ESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDM--------------------GVPTKETPFEVAEASDVV 105 (355)
Q Consensus 46 mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~--------------------g~~~~~s~~e~~~~aDiV 105 (355)
|||+|||+|.||.++|..|+++||+|++|||++++++.+++. ++..++++.++++++|+|
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~aDvV 82 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEADII 82 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGCSEE
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcCCEE
Confidence 899999999999999999999999999999999999988762 134567888999999999
Q ss_pred EEeCCCch---------HHHHHhcCCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCceEEeCC
Q 018506 106 ITMLPSSS---------HVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAP 176 (355)
Q Consensus 106 i~~v~~~~---------~~~~vl~~~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~p 176 (355)
|+|||++. .+++++..+.+.++ ++++||++||+.|.+.+++.+.+.+.... . +....+.+..+|
T Consensus 83 iiaVptp~~~~~~~dl~~v~~v~~~i~~~l~-----~g~iVV~~STv~pgt~~~l~~~l~~~~~~-~-~~~~d~~v~~~P 155 (450)
T 3gg2_A 83 FIAVGTPAGEDGSADMSYVLDAARSIGRAMS-----RYILIVTKSTVPVGSYRLIRKAIQEELDK-R-EVLIDFDIASNP 155 (450)
T ss_dssp EECCCCCBCTTSSBCCHHHHHHHHHHHHHCC-----SCEEEEECSCCCTTHHHHHHHHHHHHHHH-T-TCCCCEEEEECC
T ss_pred EEEcCCCcccCCCcChHHHHHHHHHHHhhCC-----CCCEEEEeeeCCCcchHHHHHHHHHhccc-c-CcCcceeEEech
Confidence 99999875 78888776544443 56899999999999999998877542110 0 101135677788
Q ss_pred CCCChHHH---hcCceEEEecC-CHHHHHHHHHHHHHcCC--CeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 018506 177 VSGGVLAA---EAGTLTFMVGG-SEDAYQAAKPLFLSMGK--NTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQS 250 (355)
Q Consensus 177 v~g~~~~~---~~g~~~~~~gg-~~~~~~~v~~ll~~~g~--~~~~~g~~g~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~ 250 (355)
.+..+..+ ......+++|+ ++++.+.++++|+.++. .+++.++++.+++.|+++|.+.+..+++++|+..+|++
T Consensus 156 e~a~eG~~~~~~~~p~~ivvG~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~aE~~Kl~~N~~~a~~ia~~nE~~~l~~~ 235 (450)
T 3gg2_A 156 EFLKEGNAIDDFMKPDRVVVGVDSDRARELITSLYKPMLLNNFRVLFMDIASAEMTKYAANAMLATRISFMNDVANLCER 235 (450)
T ss_dssp CCCCTTSHHHHHHSCSCEEEEESSHHHHHHHHHHHTTTCCSCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhcccchhhhccCCCEEEEEcCCHHHHHHHHHHHHHHhcCCCeEEecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 76433222 22233577776 68999999999999986 36788899999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHhcCCCcccccCCCCCCCcccCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhCCCChHHHHHHHHHHH
Q 018506 251 LGISASTLTKILNSSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAK 330 (355)
Q Consensus 251 ~Gi~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~gv~~pi~~~~~~~~~~ 330 (355)
.|+|++++.++++.... |....+ .-++||+..++.||+.++.+.|++.|+++|+++++.++.+.
T Consensus 236 ~Gid~~~v~~~~~~~~r--ig~~~~--------------~pg~G~gg~c~~KD~~~l~~~a~~~g~~~~l~~~~~~iN~~ 299 (450)
T 3gg2_A 236 VGADVSMVRLGIGSDSR--IGSKFL--------------YPGCGYGGSCFPKDVKALIRTAEDNGYRMEVLEAVERVNEK 299 (450)
T ss_dssp HTCCHHHHHHHHHTSTT--TCSSSC--------------CCSSCCCSSHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHH
T ss_pred hCCCHHHHHHHHcCCCC--CCcccC--------------CCCCCCCcccHHhhHHHHHHHHHHcCCCcHHHHHHHHHHHH
Confidence 99999999999987531 111111 11346888999999999999999999999999999988764
No 26
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=99.98 E-value=1e-31 Score=262.37 Aligned_cols=258 Identities=21% Similarity=0.302 Sum_probs=213.6
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhC----CCCCCCCHHHHhhc---CCEEEEeCCCchHHH
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDM----GVPTKETPFEVAEA---SDVVITMLPSSSHVL 116 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~----g~~~~~s~~e~~~~---aDiVi~~v~~~~~~~ 116 (355)
.+|||+|||+|.||.+++.+|+++||+|.+|||++++++.+.+. ++..+.+++++++. +|+||+|||+++.++
T Consensus 4 ~~~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVilavp~~~~v~ 83 (474)
T 2iz1_A 4 AQANFGVVGMAVMGKNLALNVESRGYTVAIYNRTTSKTEEVFKEHQDKNLVFTKTLEEFVGSLEKPRRIMLMVQAGAATD 83 (474)
T ss_dssp TTBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSCEEECSSHHHHHHTBCSSCEEEECCCTTHHHH
T ss_pred CCCcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHhCcCCCeEEeCCHHHHHhhccCCCEEEEEccCchHHH
Confidence 45899999999999999999999999999999999999988764 67777899998876 999999999987889
Q ss_pred HHhcCCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCceEEeCCCCCChHHHhcCceEEEecCC
Q 018506 117 DVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGS 196 (355)
Q Consensus 117 ~vl~~~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~pv~g~~~~~~~g~~~~~~gg~ 196 (355)
+++.++.+.+. ++++||+++++.+...+++.+.+.+ . +.+|+++|+++++..+..|. .++.|++
T Consensus 84 ~vl~~l~~~l~-----~g~iiId~s~~~~~~~~~l~~~l~~------~----g~~~v~~pv~gg~~~a~~g~-~i~~gg~ 147 (474)
T 2iz1_A 84 ATIKSLLPLLD-----IGDILIDGGNTHFPDTMRRNAELAD------S----GINFIGTGVSGGEKGALLGP-SMMPGGQ 147 (474)
T ss_dssp HHHHHHGGGCC-----TTCEEEECSCCCHHHHHHHHHHTTT------S----SCEEEEEEECSHHHHHHHCC-CEEEEEC
T ss_pred HHHHHHHhhCC-----CCCEEEECCCCCHHHHHHHHHHHHH------C----CCeEECCCCCCChhhhccCC-eEEecCC
Confidence 98876544443 4579999999998877777766542 1 37889999999988888888 7889999
Q ss_pred HHHHHHHHHHHHHcCCC--------eEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHH---h
Q 018506 197 EDAYQAAKPLFLSMGKN--------TIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQS-LGISASTLTKILN---S 264 (355)
Q Consensus 197 ~~~~~~v~~ll~~~g~~--------~~~~g~~g~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~-~Gi~~~~~~~~~~---~ 264 (355)
++.++.++++|+.++.+ +.++|+.|.+.++|+++|.+.+..+++++|++.++++ .|++++++.+++. .
T Consensus 148 ~~~~~~v~~ll~~~g~~~~~dge~~~~~~g~~g~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~~Gl~~~~~~~l~~~w~~ 227 (474)
T 2iz1_A 148 KEAYDLVAPIFEQIAAKAPQDGKPCVAYMGANGAGHYVKMVHNGIEYGDMQLIAESYDLLKRILGLSNAEIQAIFEEWNE 227 (474)
T ss_dssp HHHHHHHHHHHHHHSCBCTTTCCBSBCCCBSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhcccccCCCceEEEECCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHhcC
Confidence 99999999999999987 5788999999999999999999999999999999999 7999999998885 3
Q ss_pred cCCCcccccCCCCCCCcccCCCCCCCCCCC-cchhhHH-----HHHH-HHHHHHHHhCCCChHHHHH
Q 018506 265 SSARCWSSDSYNPVPGVMEGVPASRNYGGG-FASKLMA-----KDLN-LALASAKEVGVDCPLTSQA 324 (355)
Q Consensus 265 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-----kd~~-~~~~~a~~~gv~~pi~~~~ 324 (355)
+...+|......+ .+..+|+.+| +.++... |+.+ .+.+.+++.|+++|+++.+
T Consensus 228 g~~~s~l~~~~~~-------~l~~~d~~~g~~~vd~i~D~~~~k~tG~~~~~~A~~~gv~~P~~~~a 287 (474)
T 2iz1_A 228 GELDSYLIEITKE-------VLKRKDDEGEGYIVDKILDKAGNKGTGKWTSESALDLGVPLPLITES 287 (474)
T ss_dssp TTTCBHHHHHHHH-------HTTCBCSSSSSBGGGGBCSCCCCCSHHHHHHHHHHHHTCCCHHHHHH
T ss_pred CCccccHHHhhhh-------HhhcCCCCCChhHHHHHHHhhcccchHHHHHHHHHHcCCCCchHHHH
Confidence 4455554332211 1123466566 6666544 6666 6899999999999999986
No 27
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=99.98 E-value=1e-31 Score=262.90 Aligned_cols=263 Identities=18% Similarity=0.241 Sum_probs=216.9
Q ss_pred ceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHh-----CCCCCCCCHHHHhh---cCCEEEEeCCCchHHHH
Q 018506 46 ESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSD-----MGVPTKETPFEVAE---ASDVVITMLPSSSHVLD 117 (355)
Q Consensus 46 mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~-----~g~~~~~s~~e~~~---~aDiVi~~v~~~~~~~~ 117 (355)
|||+|||+|.||+++|.+|+++||+|++|||++++++.+.+ .++..+.+++++++ ++|+||+|||+++.+++
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~g~gi~~~~~~~e~v~~l~~aDvVilaVp~~~~v~~ 82 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVDN 82 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHHH
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhccccCCCeEEeCCHHHHHhhccCCCEEEEeCCChHHHHH
Confidence 78999999999999999999999999999999999999987 56777889999875 89999999999878999
Q ss_pred HhcCCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCceEEeCCCCCChHHHhcCceEEEecCCH
Q 018506 118 VYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSE 197 (355)
Q Consensus 118 vl~~~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~pv~g~~~~~~~g~~~~~~gg~~ 197 (355)
++..+.+.+. ++++||+++++.+....++.+.+.+ . +++|+++|+++++..+..|+ .++.|+++
T Consensus 83 vl~~l~~~l~-----~g~iII~~s~~~~~~~~~l~~~l~~------~----g~~~v~~pv~g~~~~a~~g~-~i~~gg~~ 146 (482)
T 2pgd_A 83 FIEKLVPLLD-----IGDIIIDGGNSEYRDTMRRCRDLKD------K----GILFVGSGVSGGEDGARYGP-SLMPGGNK 146 (482)
T ss_dssp HHHHHHHHCC-----TTCEEEECSCCCHHHHHHHHHHHHH------T----TCEEEEEEEESHHHHHHHCC-EEEEEECT
T ss_pred HHHHHHhhcC-----CCCEEEECCCCCHHHHHHHHHHHHH------c----CCeEeCCCCCCChhhhccCC-eEEeCCCH
Confidence 8876544442 4579999999999877777776653 1 27889999999998888898 78999999
Q ss_pred HHHHHHHHHHHHcCCCe-------EEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCHHHHHHHHH---hcC
Q 018506 198 DAYQAAKPLFLSMGKNT-------IYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSL-GISASTLTKILN---SSS 266 (355)
Q Consensus 198 ~~~~~v~~ll~~~g~~~-------~~~g~~g~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~-Gi~~~~~~~~~~---~~~ 266 (355)
+.++.++++|+.++.++ .++|+.|.+.++|+++|.+.+..+++++|++.++++. |++++++.+++. .+.
T Consensus 147 e~~~~v~~ll~~~g~~v~d~~~~~~~~g~~g~g~~~Kl~~N~~~~~~~~~i~Ea~~l~~~~~G~~~~~~~~~~~~w~~g~ 226 (482)
T 2pgd_A 147 EAWPHIKAIFQGIAAKVGTGEPCCDWVGDDGAGHFVKMVHNGIEYGDMQLICEAYHLMKDVLGLGHKEMAKAFEEWNKTE 226 (482)
T ss_dssp TTHHHHHHHHHHHSCBCTTSCBSCCCCEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHHhhhhccCCCcceEEECCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHhcCCC
Confidence 99999999999999876 6888899999999999999999999999999999999 999999999986 444
Q ss_pred CCcccccCCCCCCCcccCCCCCCCCCCCcchhhH------HHHHHHHHHHHHHhCCCChHHH-HHHHHHHHH
Q 018506 267 ARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLM------AKDLNLALASAKEVGVDCPLTS-QAQDIYAKL 331 (355)
Q Consensus 267 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~kd~~~~~~~a~~~gv~~pi~~-~~~~~~~~~ 331 (355)
..|+..+...+ .+..+++.+++.++.. .++...+++.|+++|+|+|++. .+++.+...
T Consensus 227 ~~S~l~~~~~~-------~l~~~d~~~~~~ld~i~d~~~~k~t~~~~~~~A~~~Gv~~P~i~~av~~~~~s~ 291 (482)
T 2pgd_A 227 LDSFLIEITAS-------ILKFQDADGKHLLPKIRDSAGQKGTGKWTAISALEYGVPVTLIGEAVFARCLSS 291 (482)
T ss_dssp TCBHHHHHHHH-------HHHCBCTTSSBSGGGSCCCCCCCSHHHHHHHHHHHHTCCCHHHHHHHHHHHHHH
T ss_pred cCchHHHHHhH-------HhhccCCCCCeeecccccccccccHHHHHHHHHHHcCCCcchHHHHHHHHhhhh
Confidence 45544332211 1123456556666654 3666789999999999999995 677766544
No 28
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=99.98 E-value=4.8e-32 Score=245.55 Aligned_cols=255 Identities=20% Similarity=0.226 Sum_probs=204.7
Q ss_pred ceEEEEcccHHhHHHHHHHHHCCCcEEEEeC--ChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHHHHhcCCC
Q 018506 46 ESVGFIGLGNMGFRMASNLMKAGYKMAVHDV--NCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNGPN 123 (355)
Q Consensus 46 mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr--~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl~~~~ 123 (355)
|||+|||+|+||.+++.+|.++||+|++||| ++++++.+.+.|+. +++.++++++|+||+|+|++..++.+ ..
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~g~~V~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~aDvvi~~v~~~~~~~~~-~~-- 75 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERARTVGVT--ETSEEDVYSCPVVISAVTPGVALGAA-RR-- 75 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTCE--ECCHHHHHTSSEEEECSCGGGHHHHH-HH--
T ss_pred CeEEEEechHHHHHHHHHHHHCCCeEEEeCCccCHHHHHHHHHCCCc--CCHHHHHhcCCEEEEECCCHHHHHHH-HH--
Confidence 6899999999999999999999999999999 77888888776766 77888889999999999987666654 22
Q ss_pred ccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCceEEeCCCCCChHHHhcCceEEEecCCHHHHHHH
Q 018506 124 GLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAA 203 (355)
Q Consensus 124 ~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~pv~g~~~~~~~g~~~~~~gg~~~~~~~v 203 (355)
+... .++ ++++++++.+.+.+.+.+.+.+ . . |+++|+++++..+..+.+ ++++++.+ +.+
T Consensus 76 -~~~~---~~~-~vi~~s~~~~~~~~~l~~~~~~------~-----g-~~~~~v~~~~~~~~~g~~-~~~~g~~~--~~~ 135 (264)
T 1i36_A 76 -AGRH---VRG-IYVDINNISPETVRMASSLIEK------G-----G-FVDAAIMGSVRRKGADIR-IIASGRDA--EEF 135 (264)
T ss_dssp -HHTT---CCS-EEEECSCCCHHHHHHHHHHCSS------S-----E-EEEEEECSCHHHHGGGCE-EEEESTTH--HHH
T ss_pred -HHHh---cCc-EEEEccCCCHHHHHHHHHHHhh------C-----C-eeeeeeeCCccccccCCe-EEecCCcH--HHh
Confidence 3322 234 9999999999888888777642 1 2 788899998888888887 88888765 788
Q ss_pred HHHHHHcCCCeEEeCC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcCCCcccccCCCCCCCcc
Q 018506 204 KPLFLSMGKNTIYCGG-AGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCWSSDSYNPVPGVM 282 (355)
Q Consensus 204 ~~ll~~~g~~~~~~g~-~g~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gi~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 282 (355)
++ |+.+|++++++++ +|.+.++|+++|.+.+.++.++.|++.++++.|++++ +++.+..+.+.++... .+.
T Consensus 136 ~~-l~~~g~~~~~~~~~~g~~~~~kl~~n~~~~~~~~~~~Ea~~la~~~G~~~~-~~~~~~~~~g~~~~~~----~~~-- 207 (264)
T 1i36_A 136 MK-LNRYGLNIEVRGREPGDASAIKMLRSSYTKGVSALLWETLTAAHRLGLEED-VLEMLEYTEGNDFRES----AIS-- 207 (264)
T ss_dssp HG-GGGGTCEEEECSSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH-HHHHHHTTSCSSTHHH----HHH--
T ss_pred hh-HHHcCCeeEECCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHH-HHHHHHHhcCccHHHH----HHH--
Confidence 99 9999998899997 8999999999999999999999999999999999987 7788877544334311 111
Q ss_pred cCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHCCCCCCc
Q 018506 283 EGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENGHDSKD 340 (355)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~gv~~pi~~~~~~~~~~~~~~g~g~~d 340 (355)
+..+++.++++ ..||++.+++.+++. +++|++++++++++++.+.|++..|
T Consensus 208 ---~~~~~~~~g~~---~~~~~~~~~~~a~~~-v~~p~~~~v~~~~~~~~~~~~~~~~ 258 (264)
T 1i36_A 208 ---RLKSSCIHARR---RYEEMKEVQDMLAEV-IDPVMPTCIIRIFDKLKDVKVSADA 258 (264)
T ss_dssp ---HHHHHHHTHHH---HHHHHHHHHHHHHTT-SCCSHHHHHHHHHHHHCC------G
T ss_pred ---HhcCCCCcchh---hHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHcCCChhh
Confidence 12346666665 679999999999999 9999999999999999998876655
No 29
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=99.98 E-value=1e-30 Score=249.66 Aligned_cols=251 Identities=16% Similarity=0.184 Sum_probs=203.0
Q ss_pred CCCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhC------------------CCCCCCCHHHHhhcCCE
Q 018506 43 CQFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDM------------------GVPTKETPFEVAEASDV 104 (355)
Q Consensus 43 ~~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~------------------g~~~~~s~~e~~~~aDi 104 (355)
..+|||+|||+|.||.++|..|++ ||+|++||+++++++.+++. ++..++++.++++++|+
T Consensus 34 ~~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~~ea~~~aDv 112 (432)
T 3pid_A 34 SEFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRATTDKHDAYRNADY 112 (432)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHTTCSE
T ss_pred cCCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEEEcCHHHHHhCCCE
Confidence 356899999999999999999998 99999999999999988762 34567888999999999
Q ss_pred EEEeCCCc----------hHHHHHhcCCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCceEEe
Q 018506 105 VITMLPSS----------SHVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLD 174 (355)
Q Consensus 105 Vi~~v~~~----------~~~~~vl~~~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~ 174 (355)
||+|+|++ ..+++++..+.+ ++ ++++||++||+.|.+++++.+.+.+ ..+..
T Consensus 113 ViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~-----~g~iVV~~STv~pgtt~~l~~~l~~------------~~v~~ 174 (432)
T 3pid_A 113 VIIATPTDYDPKTNYFNTSTVEAVIRDVTE-IN-----PNAVMIIKSTIPVGFTRDIKERLGI------------DNVIF 174 (432)
T ss_dssp EEECCCCEEETTTTEEECHHHHHHHHHHHH-HC-----TTSEEEECSCCCTTHHHHHHHHHTC------------CCEEE
T ss_pred EEEeCCCccccccccccHHHHHHHHHHHHh-cC-----CCcEEEEeCCCChHHHHHHHHHHhh------------ccEee
Confidence 99999997 257777765444 42 5679999999999999999887753 23556
Q ss_pred CCCCCChHHHhcCce---EEEecCCHHHHHHHHHHHHH--cCCC-eEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 018506 175 APVSGGVLAAEAGTL---TFMVGGSEDAYQAAKPLFLS--MGKN-TIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLG 248 (355)
Q Consensus 175 ~pv~g~~~~~~~g~~---~~~~gg~~~~~~~v~~ll~~--~g~~-~~~~g~~g~a~~~Kl~~n~~~~~~~~~~~Ea~~la 248 (355)
+|+++.+..+..+.+ .+++|++++.++++.++|.. ++.. .++.++++.|++.|+++|.+.+..+++++|+..+|
T Consensus 175 sPe~~~~G~A~~~~l~p~rIvvG~~~~~~~~~~~ll~~~~~~~~~~v~~~~~~~AE~~Kl~~N~~~a~~Ia~~nEl~~la 254 (432)
T 3pid_A 175 SPEFLREGRALYDNLHPSRIVIGERSARAERFADLLKEGAIKQDIPTLFTDSTEAEAIKLFANTYLALRVAYFNELDSYA 254 (432)
T ss_dssp CCCCCCTTSHHHHHHSCSCEEESSCSHHHHHHHHHHHHHCSSSSCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCccCCcchhhhcccCCceEEecCCHHHHHHHHHHHHhhhccCCCeEEecCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999988777766655 79999999999999999987 4432 45667899999999999999999999999999999
Q ss_pred HHcCCCHHHHHHHHHhcCCCcccccCCCCCCCcccCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhCCCChHHHHHHHHH
Q 018506 249 QSLGISASTLTKILNSSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIY 328 (355)
Q Consensus 249 ~~~Gi~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~gv~~pi~~~~~~~~ 328 (355)
++.|+|.+++.++++.... ....++ .-+.|++..|+.||..++... ..|++.++++++.++-
T Consensus 255 e~~GiD~~~v~~~~~~dpr---ig~~~~-------------~pg~G~GG~C~pkD~~~L~~~--~~~~~~~li~~~~~~N 316 (432)
T 3pid_A 255 ESQGLNSKQIIEGVCLDPR---IGNHYN-------------NPSFGYGGYCLPKDTKQLLAN--YESVPNNIIAAIVDAN 316 (432)
T ss_dssp HHTTCCHHHHHHHHHTSTT---TCSSSC-------------CCCSCCCTTTHHHHHHHHHHH--TTTSCCSHHHHHHHHH
T ss_pred HHcCCCHHHHHHHHccCCC---CCcccC-------------CCCCCCcccchhhhHHHHHHH--hcCCchhHHHHHHHHH
Confidence 9999999999999986421 111110 012367889999999988644 4699999999988775
Q ss_pred HH
Q 018506 329 AK 330 (355)
Q Consensus 329 ~~ 330 (355)
+.
T Consensus 317 ~~ 318 (432)
T 3pid_A 317 RT 318 (432)
T ss_dssp HH
T ss_pred Hh
Confidence 43
No 30
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=99.97 E-value=4.2e-31 Score=257.99 Aligned_cols=256 Identities=18% Similarity=0.303 Sum_probs=210.4
Q ss_pred ceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhC-C-------CCCCCCHHHHhhc---CCEEEEeCCCchH
Q 018506 46 ESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDM-G-------VPTKETPFEVAEA---SDVVITMLPSSSH 114 (355)
Q Consensus 46 mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~-g-------~~~~~s~~e~~~~---aDiVi~~v~~~~~ 114 (355)
|||+|||+|.||+++|.+|+++||+|++|||++++++.+.+. | +..+.+++++++. +|+||+|||+++.
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~g~~~~~~~i~~~~~~~e~v~~l~~aDvVilaVp~~~~ 81 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAA 81 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHH
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCCCCCCCeEEECCHHHHHhcccCCCEEEEecCChHH
Confidence 789999999999999999999999999999999999988763 5 5567789898874 9999999999878
Q ss_pred HHHHhcCCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCceEEeCCCCCChHHHhcCceEEEec
Q 018506 115 VLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVG 194 (355)
Q Consensus 115 ~~~vl~~~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~pv~g~~~~~~~g~~~~~~g 194 (355)
+++++..+.+.+. ++++||+++++.+...+++.+.+.+ . +.+|+++|+++++..+..+. .++.|
T Consensus 82 v~~vl~~l~~~l~-----~g~iIId~sng~~~~~~~l~~~l~~------~----g~~~v~~pv~gg~~~a~~g~-~i~~g 145 (478)
T 1pgj_A 82 TDSTIEQLKKVFE-----KGDILVDTGNAHFKDQGRRAQQLEA------A----GLRFLGMGISGGEEGARKGP-AFFPG 145 (478)
T ss_dssp HHHHHHHHHHHCC-----TTCEEEECCCCCHHHHHHHHHHHHT------T----TCEEEEEEEESHHHHHHHCC-EEEEE
T ss_pred HHHHHHHHHhhCC-----CCCEEEECCCCChHHHHHHHHHHHH------C----CCeEEEeeccCCHHHHhcCC-eEecc
Confidence 8888866544442 4579999999998877777776653 1 27889999999988888888 78889
Q ss_pred CCHHHHHHHHHHHHHcCCC-------eEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH----
Q 018506 195 GSEDAYQAAKPLFLSMGKN-------TIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILN---- 263 (355)
Q Consensus 195 g~~~~~~~v~~ll~~~g~~-------~~~~g~~g~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gi~~~~~~~~~~---- 263 (355)
++++.++.++++|+.++.+ ++++|+.|.+.+.|+++|.+.+..+++++|++.++++.|++++++.+++.
T Consensus 146 g~~~~~~~v~~ll~~~g~~~~dg~~~v~~~g~~G~g~~~Kl~~N~~~~~~~~~i~Ea~~l~~~~G~~~~~~~~l~~~w~~ 225 (478)
T 1pgj_A 146 GTLSVWEEIRPIVEAAAAKADDGRPCVTMNGSGGAGSCVKMYHNSGEYAILQIWGEVFDILRAMGLNNDEVAAVLEDWKS 225 (478)
T ss_dssp ECHHHHHHHHHHHHHHSCBCTTSCBSCCCCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcccccCCCeeEEEeCCchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhcc
Confidence 9999999999999999987 68899999999999999999999999999999999999999999999987
Q ss_pred hcCCCcccccCCCCCCCcccCCCCCCCCCCC-cchhhHH-----HHH-HHHHHHHHHhCCCChHHHHHH
Q 018506 264 SSSARCWSSDSYNPVPGVMEGVPASRNYGGG-FASKLMA-----KDL-NLALASAKEVGVDCPLTSQAQ 325 (355)
Q Consensus 264 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-----kd~-~~~~~~a~~~gv~~pi~~~~~ 325 (355)
.+.+.++......+ ++ ..+++ +| +.++.+. |++ +.+++.|+++|+++|+++.+.
T Consensus 226 ~g~~~s~l~~~~~~---~l----~~~d~-~G~~~ld~i~D~~~~kgtg~~~~~~A~~~Gv~~Pi~~~av 286 (478)
T 1pgj_A 226 KNFLKSYMLDISIA---AA----RAKDK-DGSYLTEHVMDRIGSKGTGLWSAQEALEIGVPAPSLNMAV 286 (478)
T ss_dssp TSTTCBHHHHHHHH---HH----HCBCT-TSSBGGGGBCCCCCCCSHHHHHHHHHHHHTCCCHHHHHHH
T ss_pred CCCcCchHHHhhch---hh----hcCCC-CChhHHHHHHHHhcCccHHHHHHHHHHHhCCCChHHHHHH
Confidence 55555554332211 11 12344 33 5555544 555 689999999999999999843
No 31
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=99.97 E-value=7.2e-30 Score=249.61 Aligned_cols=260 Identities=13% Similarity=0.138 Sum_probs=203.0
Q ss_pred CCCceEEEEcccHHhHHHHHHHHHC--CCcEEEEeCChhHHHHHHhCC-------------------CCCCCCHHHHhhc
Q 018506 43 CQFESVGFIGLGNMGFRMASNLMKA--GYKMAVHDVNCNVMKMFSDMG-------------------VPTKETPFEVAEA 101 (355)
Q Consensus 43 ~~~mkIgiIG~G~mG~~ia~~L~~~--G~~V~v~dr~~~~~~~l~~~g-------------------~~~~~s~~e~~~~ 101 (355)
+++|||+|||+|.||.++|..|+++ ||+|++|||++++++.+++.+ +..++++.+++++
T Consensus 7 ~~~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~t~~~~~~~~~ 86 (481)
T 2o3j_A 7 GKVSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIPKAIAE 86 (481)
T ss_dssp CCCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHhhc
Confidence 4568999999999999999999998 799999999999999887532 2345677788899
Q ss_pred CCEEEEeCCCch--------------HHHHHhcCCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhh-chhhhccCC
Q 018506 102 SDVVITMLPSSS--------------HVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSN-CILKEKKDS 166 (355)
Q Consensus 102 aDiVi~~v~~~~--------------~~~~vl~~~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~-~~~~~~~g~ 166 (355)
+|+||+|||++. .+++++..+.+.+. ++++||++||+.|.+.+.+.+.+.+ ..+. .+
T Consensus 87 aDvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~-----~g~iVV~~STv~~gt~~~l~~~l~~~~~~~--~~- 158 (481)
T 2o3j_A 87 ADLIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAG-----GPKIVVEKSTVPVKAAESIGCILREAQKNN--EN- 158 (481)
T ss_dssp CSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCC-----SCEEEEECSCCCTTHHHHHHHHHHHHTC-------
T ss_pred CCEEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCC-----CCCEEEECCCCCCCHHHHHHHHHHHhhCcC--cC-
Confidence 999999998874 36777665444442 5689999999999999888887754 1100 01
Q ss_pred CCCceEEeCCCCCChHHHh---cCceEEEecCCH-----HHHHHHHHHHHHcCC-CeEEeCCcchHHHHHHHHHHHHHHH
Q 018506 167 WENPVMLDAPVSGGVLAAE---AGTLTFMVGGSE-----DAYQAAKPLFLSMGK-NTIYCGGAGNGAAAKICNNLTMAVS 237 (355)
Q Consensus 167 ~~~~~~~~~pv~g~~~~~~---~g~~~~~~gg~~-----~~~~~v~~ll~~~g~-~~~~~g~~g~a~~~Kl~~n~~~~~~ 237 (355)
..+.+..+|.+..+..+. .....+++|++. ++++.++++|+.++. .++++++++.+++.|++.|.+.+..
T Consensus 159 -~d~~v~~~Pe~~~~G~a~~~~~~~~~iviG~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~d~~~ae~~Kl~~N~~~a~~ 237 (481)
T 2o3j_A 159 -LKFQVLSNPEFLAEGTAMKDLANPDRVLIGGESSPEGLQAVAELVRIYENWVPRNRIITTNTWSSELSKLVANAFLAQR 237 (481)
T ss_dssp -CCEEEEECCCCCCTTCHHHHHHSCSCEEEEECSSHHHHHHHHHHHHHHHTTSCGGGEEEEEHHHHHHHHHHHHHHHHHH
T ss_pred -CceEEEeCcccccccchhhcccCCCEEEEEecCchhhHHHHHHHHHHHHhhcCCCeEEecCHHHHHHHHHHHHHHHHHH
Confidence 124567788764443322 222256777653 578899999999996 7888899999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHhcCCCcccccCCCCCCCcccCCCCCCCCCCC--cchhhHHHHHHHHHHHHHHhC
Q 018506 238 MLGVSEALTLGQSLGISASTLTKILNSSSARCWSSDSYNPVPGVMEGVPASRNYGGG--FASKLMAKDLNLALASAKEVG 315 (355)
Q Consensus 238 ~~~~~Ea~~la~~~Gi~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~kd~~~~~~~a~~~g 315 (355)
+++++|+..+|++.|+|.+++.++++.+.. +. ...|.|| |+..++.||+.++.+.|++.|
T Consensus 238 ia~~nE~~~la~~~Gid~~~v~~~~~~~~r--i~----------------~~~~~pg~g~gg~c~~KD~~~l~~~A~~~g 299 (481)
T 2o3j_A 238 ISSINSISAVCEATGAEISEVAHAVGYDTR--IG----------------SKFLQASVGFGGSCFQKDVLSLVYLCESLN 299 (481)
T ss_dssp HHHHHHHHHHHHHHSCCHHHHHHHHHTSTT--TC----------------SSSCCCCSCCCSSSHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhCcCHHHHHHHHccCCC--CC----------------CCCCCCCCccCCccHHHHHHHHHHHHHHcC
Confidence 999999999999999999999999986531 11 1133444 578899999999999999999
Q ss_pred CC--ChHHHHHHHHHH
Q 018506 316 VD--CPLTSQAQDIYA 329 (355)
Q Consensus 316 v~--~pi~~~~~~~~~ 329 (355)
++ +|+++++.++-+
T Consensus 300 ~~~~~~l~~~~~~~N~ 315 (481)
T 2o3j_A 300 LPQVADYWQGVININN 315 (481)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred CCccchHHHHHHHHHH
Confidence 99 999988876544
No 32
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=99.97 E-value=1.3e-29 Score=247.03 Aligned_cols=262 Identities=16% Similarity=0.182 Sum_probs=204.4
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCC--------------------CCCCCCHHHHhhcCC
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMG--------------------VPTKETPFEVAEASD 103 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g--------------------~~~~~s~~e~~~~aD 103 (355)
..|||+|||+|.||.++|..|+++||+|++|||++++++.+++.+ +.+++++.++++++|
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~~aD 86 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVAHGD 86 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHHHHHCS
T ss_pred CCceEEEECcCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHHhhcCC
Confidence 469999999999999999999999999999999999999988742 234567778889999
Q ss_pred EEEEeCCCc---------hHHHHHhcCCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCC-CCceEE
Q 018506 104 VVITMLPSS---------SHVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSW-ENPVML 173 (355)
Q Consensus 104 iVi~~v~~~---------~~~~~vl~~~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~~~~~~~~g~~-~~~~~~ 173 (355)
+||+|||+| ..+++++..+.+.++ ++++||+.||++|.+.+.+.+.+.+. +. . +.+ ..+.+.
T Consensus 87 vviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~-----~~~iVV~~STv~~gt~~~l~~~l~~~-~~-~-g~~~~~~~v~ 158 (478)
T 2y0c_A 87 VQFIAVGTPPDEDGSADLQYVLAAARNIGRYMT-----GFKVIVDKSTVPVGTAERVRAAVAEE-LA-K-RGGDQMFSVV 158 (478)
T ss_dssp EEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCC-----SCEEEEECSCCCTTHHHHHHHHHHHH-HH-H-TTCCCCEEEE
T ss_pred EEEEEeCCCcccCCCccHHHHHHHHHHHHHhcC-----CCCEEEEeCCcCCCchHHHHHHHHHH-hc-C-CCCCccEEEE
Confidence 999999987 688888876555543 46799999999999988888877542 10 1 100 123456
Q ss_pred eCCCCCChH---HHhcCceEEEecCC-H----HHHHHHHHHHHHcCC--CeEEeCCcchHHHHHHHHHHHHHHHHHHHHH
Q 018506 174 DAPVSGGVL---AAEAGTLTFMVGGS-E----DAYQAAKPLFLSMGK--NTIYCGGAGNGAAAKICNNLTMAVSMLGVSE 243 (355)
Q Consensus 174 ~~pv~g~~~---~~~~g~~~~~~gg~-~----~~~~~v~~ll~~~g~--~~~~~g~~g~a~~~Kl~~n~~~~~~~~~~~E 243 (355)
..|.+..+. ........+++|++ + +..+.++++|+.+.+ .++++++++.+++.|++.|.+.+..+++++|
T Consensus 159 ~~Pe~~~eG~~~~~~~~p~~iviG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~di~~ae~~Kl~~N~~~a~~ia~~nE 238 (478)
T 2y0c_A 159 SNPEFLKEGAAVDDFTRPDRIVIGCDDDVPGERARELMKKLYAPFNRNHERTLYMDVRSAEFTKYAANAMLATRISFMNE 238 (478)
T ss_dssp ECCCCCCTTCHHHHHHSCSCEEEECCSSHHHHHHHHHHHHHTGGGGSSSCCEEEECHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EChhhhcccceeeccCCCCEEEEEECCCcccHHHHHHHHHHHHHHhccCCeEEcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666552222 22222225667765 5 788999999999875 5788899999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHHHHHHhcCCCcccccCCCCCCCcccCCCCCCCCCCC--cchhhHHHHHHHHHHHHHHhCCCChHH
Q 018506 244 ALTLGQSLGISASTLTKILNSSSARCWSSDSYNPVPGVMEGVPASRNYGGG--FASKLMAKDLNLALASAKEVGVDCPLT 321 (355)
Q Consensus 244 a~~la~~~Gi~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~kd~~~~~~~a~~~gv~~pi~ 321 (355)
+..+|++.|+|.+++.+.+..... +. ...+.+| ++..+..||++++++.++++|+++|++
T Consensus 239 ~~~la~~~Gid~~~v~~~i~~~~r--ig----------------~~~~~pG~g~gg~c~~kD~~~l~~~A~~~gv~~pl~ 300 (478)
T 2y0c_A 239 LANLADRFGADIEAVRRGIGSDPR--IG----------------YHFLYAGCGYGGSCFPKDVEALIRTADEHGQSLQIL 300 (478)
T ss_dssp HHHHHHHTTCCHHHHHHHHHTSTT--TC----------------STTCCCSSCCCSSSHHHHHHHHHHHHHHTTCCCHHH
T ss_pred HHHHHHHhCCCHHHHHHHHhcCCc--cC----------------cccCCCCcccccCcCHHHHHHHHHHHHHcCCCcHHH
Confidence 999999999999999988874210 00 1123343 456688999999999999999999999
Q ss_pred HHHHHHHHHH
Q 018506 322 SQAQDIYAKL 331 (355)
Q Consensus 322 ~~~~~~~~~~ 331 (355)
++++++++..
T Consensus 301 ~~v~~in~~~ 310 (478)
T 2y0c_A 301 KAVSSVNATQ 310 (478)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999988754
No 33
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=99.97 E-value=6.6e-30 Score=244.55 Aligned_cols=255 Identities=18% Similarity=0.205 Sum_probs=189.1
Q ss_pred CceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCC-CCHHHH---------------hhcCCEEEEe
Q 018506 45 FESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTK-ETPFEV---------------AEASDVVITM 108 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~-~s~~e~---------------~~~aDiVi~~ 108 (355)
-.|..|||+|.||.++|.+|+++||+|++|||++++++.+++...... ..++++ +++||+||+|
T Consensus 11 ~~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~ttd~~~aDvvii~ 90 (431)
T 3ojo_A 11 GSKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVSTTPEASDVFIIA 90 (431)
T ss_dssp -CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESSCCCCSEEEEC
T ss_pred CCccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccCceEEeCchhhCCEEEEE
Confidence 368999999999999999999999999999999999999987432221 111111 3479999999
Q ss_pred CCCch-----------HHHHHhcCCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccC-CCCCceEEeCC
Q 018506 109 LPSSS-----------HVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKD-SWENPVMLDAP 176 (355)
Q Consensus 109 v~~~~-----------~~~~vl~~~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~~~~~~~~g-~~~~~~~~~~p 176 (355)
||++. .+..+...+.+.++ ++++||+.||+.|.+++++.+.+.+. .+. ...++.++++|
T Consensus 91 VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~-----~g~iVV~~STV~pgtt~~v~~~i~e~----~g~~~~~d~~v~~~P 161 (431)
T 3ojo_A 91 VPTPNNDDQYRSCDISLVMRALDSILPFLK-----KGNTIIVESTIAPKTMDDFVKPVIEN----LGFTIGEDIYLVHCP 161 (431)
T ss_dssp CCCCBCSSSSCBBCCHHHHHHHHHHGGGCC-----TTEEEEECSCCCTTHHHHTHHHHHHT----TTCCBTTTEEEEECC
T ss_pred eCCCccccccCCccHHHHHHHHHHHHHhCC-----CCCEEEEecCCChhHHHHHHHHHHHH----cCCCcCCCeEEEECC
Confidence 99986 25555544333332 56899999999999999998866431 110 01236899999
Q ss_pred CCCChHHHhc---CceEEEecCCHHHHHHHHHHHHHcCCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Q 018506 177 VSGGVLAAEA---GTLTFMVGGSEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGI 253 (355)
Q Consensus 177 v~g~~~~~~~---g~~~~~~gg~~~~~~~v~~ll~~~g~~~~~~g~~g~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gi 253 (355)
.+..+..+.. ....++.|++++..+.++++|+.++..+++++++++|+..|+++|.+.+..+++++|+..+|++.|+
T Consensus 162 e~~~~G~A~~~~~~p~~Iv~G~~~~~~~~~~~ly~~~~~~~~~~~~~~~AE~~Kl~~N~~~a~~Ia~~nE~~~l~e~~Gi 241 (431)
T 3ojo_A 162 ERVLPGKILEELVHNNRIIGGVTKACIEAGKRVYRTFVQGEMIETDARTAEMSKLMENTYRDVNIALANELTKICNNLNI 241 (431)
T ss_dssp CCCCTTSHHHHHHHSCEEEEESSHHHHHHHHHHHTTTCCSCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CcCCCcchhhcccCCCEEEEeCCHHHHHHHHHHHHHHhCCcEEeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 8854443322 2337888899999999999999999888889999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhcCCCcccccCCCCCCCcccCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhCCCChHHHHHHHHHH
Q 018506 254 SASTLTKILNSSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYA 329 (355)
Q Consensus 254 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~gv~~pi~~~~~~~~~ 329 (355)
|.+++.++++.... + ..+ .-++|++..|+.||..++...+++.| ++++++.++-+
T Consensus 242 D~~~v~~~~~~~~r--i--~~l--------------~pG~G~GG~C~pkD~~~L~~~a~~~~---~li~~~~~iN~ 296 (431)
T 3ojo_A 242 NVLDVIEMANKHPR--V--NIH--------------QPGPGVGGHCLAVDPYFIIAKDPENA---KLIQTGREINN 296 (431)
T ss_dssp CHHHHHHHHTTSTT--C--CCC--------------CCCSCCCCCCBCSCC---------CC---HHHHHHHHHHH
T ss_pred CHHHHHHHHccCCC--c--ccC--------------CCCCCccccchhhhHHHHHHHHHHHh---HHHHHHHHHHH
Confidence 99999999975431 1 111 11346788899999999999999987 78877776544
No 34
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=99.97 E-value=6.2e-30 Score=249.54 Aligned_cols=255 Identities=13% Similarity=0.143 Sum_probs=189.7
Q ss_pred CceEEEEcccHHhHHHHHHHHHC--CCcEEEEeCChhHHHHHHh-------------------CCCCCCCCHHHHhhcCC
Q 018506 45 FESVGFIGLGNMGFRMASNLMKA--GYKMAVHDVNCNVMKMFSD-------------------MGVPTKETPFEVAEASD 103 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~~--G~~V~v~dr~~~~~~~l~~-------------------~g~~~~~s~~e~~~~aD 103 (355)
+|||+|||+|.||.++|..|+++ ||+|++|||++++++.+++ .++..++++.++++++|
T Consensus 5 ~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~t~~~~e~~~~aD 84 (467)
T 2q3e_A 5 IKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKEAD 84 (467)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHCS
T ss_pred ccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHHhcCC
Confidence 58999999999999999999999 8999999999999988653 23445678888899999
Q ss_pred EEEEeCCCchH--------------HHHHhcCCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCC
Q 018506 104 VVITMLPSSSH--------------VLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWEN 169 (355)
Q Consensus 104 iVi~~v~~~~~--------------~~~vl~~~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~ 169 (355)
+||+|||++.. +.+++..+.+.+ .++++||++||+.|.+.+.+.+.+.+. ......
T Consensus 85 vViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l-----~~g~iVV~~STv~~g~~~~l~~~l~~~-----~~~~~d 154 (467)
T 2q3e_A 85 LVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNS-----NGYKIVTEKSTVPVRAAESIRRIFDAN-----TKPNLN 154 (467)
T ss_dssp EEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTC-----CSEEEEEECSCCCTTHHHHHHHHHHHT-----CCTTCE
T ss_pred EEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhC-----CCCCEEEECCcCCchHHHHHHHHHHHh-----CCCCCC
Confidence 99999998754 233333322222 256799999999999988888777542 110011
Q ss_pred ceEEeCCCCC---ChHHHhcCceEEEecC-----CHHHHHHHHHHHHHc-CCCeEEeCCcchHHHHHHHHHHHHHHHHHH
Q 018506 170 PVMLDAPVSG---GVLAAEAGTLTFMVGG-----SEDAYQAAKPLFLSM-GKNTIYCGGAGNGAAAKICNNLTMAVSMLG 240 (355)
Q Consensus 170 ~~~~~~pv~g---~~~~~~~g~~~~~~gg-----~~~~~~~v~~ll~~~-g~~~~~~g~~g~a~~~Kl~~n~~~~~~~~~ 240 (355)
+.+...|... ...........+++|+ +++..+.++++|+.+ +..++++++++.+++.|++.|.+.+..+++
T Consensus 155 ~~V~~~Pe~~~~G~~~~d~~~~~rivvGg~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~ae~~Kl~~N~~~a~~ia~ 234 (467)
T 2q3e_A 155 LQVLSNPEFLAEGTAIKDLKNPDRVLIGGDETPEGQRAVQALCAVYEHWVPREKILTTNTWSSELSKLAANAFLAQRISS 234 (467)
T ss_dssp EEEEECCCCCCTTSHHHHHHSCSCEEEECCSSHHHHHHHHHHHHHHTTTSCGGGEEEECHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEeCHHHhhcccchhhccCCCEEEECCCCCCCCHHHHHHHHHHHHHhccCCeEEecCHHHHHHHHHHHHHHHHHHHHH
Confidence 2333444331 1111112222377777 788899999999999 777889999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHhcCCCcccccCCCCCCCcccCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhCCC--C
Q 018506 241 VSEALTLGQSLGISASTLTKILNSSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVD--C 318 (355)
Q Consensus 241 ~~Ea~~la~~~Gi~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~gv~--~ 318 (355)
++|+..+|++.|+|.+++.++++.... +....+.| .+||+..++.||++++.+.+++.|++ .
T Consensus 235 ~nE~~~l~~~~Gid~~~v~~~~~~~~~--~~~~~~~p--------------g~g~gg~c~~kD~~~l~~~a~~~g~~~~~ 298 (467)
T 2q3e_A 235 INSISALCEATGADVEEVATAIGMDQR--IGNKFLKA--------------SVGFGGSCFQKDVLNLVYLCEALNLPEVA 298 (467)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHTSTT--TCSSSCCC--------------CSCCCSSSHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHhCcCHHHHHHHHcCCCC--CCccccCC--------------CCCCCCccHHHHHHHHHHHHHHcCCchHH
Confidence 999999999999999999999986532 11111111 23467889999999999999999987 3
Q ss_pred hHHHHHH
Q 018506 319 PLTSQAQ 325 (355)
Q Consensus 319 pi~~~~~ 325 (355)
++++++.
T Consensus 299 ~~~~~~~ 305 (467)
T 2q3e_A 299 RYWQQVI 305 (467)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4444433
No 35
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=99.96 E-value=7.1e-29 Score=240.22 Aligned_cols=263 Identities=13% Similarity=0.140 Sum_probs=199.6
Q ss_pred ceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhC-------------------C-CCCCCCHHHHhhcCCEE
Q 018506 46 ESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDM-------------------G-VPTKETPFEVAEASDVV 105 (355)
Q Consensus 46 mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~-------------------g-~~~~~s~~e~~~~aDiV 105 (355)
|||+|||+|.||.++|..|+++||+|++|||++++++.+++. + +..++++.++++++|+|
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~aDvv 80 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDVS 80 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhccCCEE
Confidence 699999999999999999999999999999999999988763 2 44567888888999999
Q ss_pred EEeCCCchH---------HHHHhcCCCccccCCCCCCCeEEEEcCCCCHHH-HHHHHHHHhhchhhhccCCCCCceEEeC
Q 018506 106 ITMLPSSSH---------VLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQT-SRNISAAVSNCILKEKKDSWENPVMLDA 175 (355)
Q Consensus 106 i~~v~~~~~---------~~~vl~~~~~~l~~~~~~~~~ivi~~st~~~~~-~~~l~~~~~~~~~~~~~g~~~~~~~~~~ 175 (355)
|+|||++.. +++++..+.+.+... ..+++||++||+.|.+ .+.+.+.+.+.. ....+ .++.+...
T Consensus 81 iiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~--~~~~iVV~~Stv~~g~t~~~l~~~l~~~~-g~~~~--~~~~v~~~ 155 (436)
T 1mv8_A 81 FICVGTPSKKNGDLDLGYIETVCREIGFAIREK--SERHTVVVRSTVLPGTVNNVVIPLIEDCS-GKKAG--VDFGVGTN 155 (436)
T ss_dssp EECCCCCBCTTSSBCCHHHHHHHHHHHHHHTTC--CSCCEEEECSCCCTTHHHHTHHHHHHHHH-SCCBT--TTBEEEEC
T ss_pred EEEcCCCcccCCCcchHHHHHHHHHHHHHhccc--CCCcEEEEeCCcCCCchHHHHHHHHHHhc-CcccC--CcEEEEEC
Confidence 999998865 788776655444310 0167999999999888 666766665310 00000 12344555
Q ss_pred CCCCC---hHHHhcCceEEEecCC-HHHHHHHHHHHHHcCCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 018506 176 PVSGG---VLAAEAGTLTFMVGGS-EDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSL 251 (355)
Q Consensus 176 pv~g~---~~~~~~g~~~~~~gg~-~~~~~~v~~ll~~~g~~~~~~g~~g~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~ 251 (355)
|..-. ..........++.|++ ++..+.++++++.++..++. ++++.+.+.|++.|.+.+..+++++|+..+|++.
T Consensus 156 Pe~~~~G~~~~~~~~~~~iv~G~~~~~~~~~~~~l~~~~~~~v~~-~~~~~ae~~Kl~~N~~~a~~ia~~nE~~~l~~~~ 234 (436)
T 1mv8_A 156 PEFLRESTAIKDYDFPPMTVIGELDKQTGDLLEEIYRELDAPIIR-KTVEVAEMIKYTCNVWHAAKVTFANEIGNIAKAV 234 (436)
T ss_dssp CCCCCTTSHHHHHHSCSCEEEEESSHHHHHHHHHHHTTSSSCEEE-EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cccccccccchhccCCCEEEEEcCCHHHHHHHHHHHhccCCCEEc-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 65422 2222223335667765 88999999999999986555 7789999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCCCcccccCCCCCCCcccCCCCCCCCCC--CcchhhHHHHHHHHHHHHHHhCCCChHHHHHHHHHH
Q 018506 252 GISASTLTKILNSSSARCWSSDSYNPVPGVMEGVPASRNYGG--GFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYA 329 (355)
Q Consensus 252 Gi~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~kd~~~~~~~a~~~gv~~pi~~~~~~~~~ 329 (355)
|+|.+++.+++.... .+.. ..+.+.+ +|+..++.||++++.+.++++|+++|++++++++.+
T Consensus 235 Gid~~~v~~~~~~~~--r~~~--------------~~~~~~pg~g~gg~~~~kD~~~l~~~a~~~g~~~pl~~~v~~in~ 298 (436)
T 1mv8_A 235 GVDGREVMDVICQDH--KLNL--------------SRYYMRPGFAFGGSCLPKDVRALTYRASQLDVEHPMLGSLMRSNS 298 (436)
T ss_dssp TSCHHHHHHHHTTCT--TTTT--------------SSTTCSCCSCCCSSSHHHHHHHHHHHHHHTTCCCTTGGGHHHHHH
T ss_pred CCCHHHHHHHhcCCC--CCCC--------------cccCCCCcccccCcCcHhhHHHHHHHHHHcCCCcHHHHHHHHHHh
Confidence 999999999987521 0110 0113333 678889999999999999999999999999988755
Q ss_pred H
Q 018506 330 K 330 (355)
Q Consensus 330 ~ 330 (355)
.
T Consensus 299 ~ 299 (436)
T 1mv8_A 299 N 299 (436)
T ss_dssp H
T ss_pred H
Confidence 4
No 36
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=99.96 E-value=2.7e-28 Score=233.54 Aligned_cols=247 Identities=16% Similarity=0.118 Sum_probs=195.6
Q ss_pred ceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCC------------------CCCCCHHHHhhcCCEEEE
Q 018506 46 ESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGV------------------PTKETPFEVAEASDVVIT 107 (355)
Q Consensus 46 mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~------------------~~~~s~~e~~~~aDiVi~ 107 (355)
|||+|||+|.||.++|..|++ ||+|++|||++++++.+++.+. ..++++.++++++|+||+
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~~~~~aDvvii 79 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-QNEVTIVDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKAAYKEAELVII 79 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHHHCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeCCHHHHhcCCCEEEE
Confidence 699999999999999999999 9999999999999999987654 335677788889999999
Q ss_pred eCCCch----------HHHHHhcCCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCceEEeCCC
Q 018506 108 MLPSSS----------HVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPV 177 (355)
Q Consensus 108 ~v~~~~----------~~~~vl~~~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~pv 177 (355)
|+|++. .+++++..+.+ +. ++++||++||+.|.+.+.+.+.+.+ -.+..+|.
T Consensus 80 avpt~~~~~~~~~dl~~v~~v~~~i~~-l~-----~~~iVV~~ST~~~g~~~~l~~~~~~------------~~v~~~Pe 141 (402)
T 1dlj_A 80 ATPTNYNSRINYFDTQHVETVIKEVLS-VN-----SHATLIIKSTIPIGFITEMRQKFQT------------DRIIFSPE 141 (402)
T ss_dssp CCCCCEETTTTEECCHHHHHHHHHHHH-HC-----SSCEEEECSCCCTTHHHHHHHHTTC------------SCEEECCC
T ss_pred ecCCCcccCCCCccHHHHHHHHHHHHh-hC-----CCCEEEEeCCCCccHHHHHHHHhCC------------CeEEECCc
Confidence 999874 58888766544 42 4579999999999998888876542 14667787
Q ss_pred CCChHHH---hcCceEEEecCCH-------HHHHHHHHHHHHcC-C-C-eEEeCCcchHHHHHHHHHHHHHHHHHHHHHH
Q 018506 178 SGGVLAA---EAGTLTFMVGGSE-------DAYQAAKPLFLSMG-K-N-TIYCGGAGNGAAAKICNNLTMAVSMLGVSEA 244 (355)
Q Consensus 178 ~g~~~~~---~~g~~~~~~gg~~-------~~~~~v~~ll~~~g-~-~-~~~~g~~g~a~~~Kl~~n~~~~~~~~~~~Ea 244 (355)
+..+..+ ......+++|+++ +..+.+.++|...+ . . +++.++++.++|.|++.|.+.+..+++++|+
T Consensus 142 ~~~~G~a~~~~~~~~riviG~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~di~~ae~~Kl~~N~~~a~~ia~~nE~ 221 (402)
T 1dlj_A 142 FLRESKALYDNLYPSRIIVSCEENDSPKVKADAEKFALLLKSAAKKNNVPVLIMGASEAEAVKLFANTYLALRVAYFNEL 221 (402)
T ss_dssp CCCTTSTTHHHHSCSCEEEECCTTSCHHHHHHHHHHHHHHHHHCSCSCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCcchhhcccCCCEEEEeCCCcccchhHHHHHHHHHHHhhhhccCCceEEecChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6443322 2233347788766 66778888887533 2 2 5788889999999999999999999999999
Q ss_pred HHHHHHcCCCHHHHHHHHHhcCCCcccccCCCCCCCcccCCCCCCCCCC--CcchhhHHHHHHHHHHHHHHhCCCChHHH
Q 018506 245 LTLGQSLGISASTLTKILNSSSARCWSSDSYNPVPGVMEGVPASRNYGG--GFASKLMAKDLNLALASAKEVGVDCPLTS 322 (355)
Q Consensus 245 ~~la~~~Gi~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~kd~~~~~~~a~~~gv~~pi~~ 322 (355)
..+|++.|+|.+++.++++... +.. ...+.| ||+..++.||+.++...++ |+++|+++
T Consensus 222 ~~l~~~~Gid~~~v~~~~~~~~---ri~---------------~~~~~pg~g~gg~c~~kD~~~l~~~a~--~~~~~l~~ 281 (402)
T 1dlj_A 222 DTYAESRKLNSHMIIQGISYDD---RIG---------------MHYNNPSFGYGGYSLPKDTKQLLANYN--NIPQTLIE 281 (402)
T ss_dssp HHHHHHTTCCHHHHHHHHHTST---TTC---------------SSSCCCCSSCCSSHHHHHHHHHHHHHT--TSSCSHHH
T ss_pred HHHHHHhCCCHHHHHHHhccCC---CCC---------------cCCCCCCCccCCccHHhhHHHHHHHhc--CCChHHHH
Confidence 9999999999999999998653 110 112234 6788899999999998884 89999999
Q ss_pred HHHHHHHHH
Q 018506 323 QAQDIYAKL 331 (355)
Q Consensus 323 ~~~~~~~~~ 331 (355)
++.++.+.-
T Consensus 282 ~~~~~N~~~ 290 (402)
T 1dlj_A 282 AIVSSNNVR 290 (402)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 988766543
No 37
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=99.96 E-value=6.1e-27 Score=223.69 Aligned_cols=265 Identities=16% Similarity=0.201 Sum_probs=204.2
Q ss_pred CCCCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhC--------------------CCCCCCCHHHHhhc
Q 018506 42 SCQFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDM--------------------GVPTKETPFEVAEA 101 (355)
Q Consensus 42 ~~~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~--------------------g~~~~~s~~e~~~~ 101 (355)
...|.+|+|||+|.+|.++|..|+++||+|+++|.++++++.+++. ...++++..++++.
T Consensus 18 ~~~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l~~tt~~~~ai~~ 97 (444)
T 3vtf_A 18 GSHMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALSSGRLSFAESAEEAVAA 97 (444)
T ss_dssp TCCCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEECSSHHHHHHT
T ss_pred CCCCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcCCeeEEcCHHHHHhc
Confidence 3466799999999999999999999999999999999999888753 13456788899999
Q ss_pred CCEEEEeCCCch---------HHHHHhcCCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCceE
Q 018506 102 SDVVITMLPSSS---------HVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVM 172 (355)
Q Consensus 102 aDiVi~~v~~~~---------~~~~vl~~~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~ 172 (355)
+|++|+|||+|. .++++.+.+.+.++.. .++++||..||++|.+++++...+.++ ..++ ..+.+
T Consensus 98 ad~~~I~VpTP~~~d~~~Dl~~v~~a~~~I~~~l~~~--~~g~lVV~eSTVppGtte~~~~~~l~~---~~~~--~~f~v 170 (444)
T 3vtf_A 98 TDATFIAVGTPPAPDGSADLRYVEAAARAVGRGIRAK--GRWHLVVVKSTVPPGTTEGLVARAVAE---EAGG--VKFSV 170 (444)
T ss_dssp SSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHHHH--CSCCEEEECSCCCTTTTTTHHHHHHHT---TTTT--CCCEE
T ss_pred CCceEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhhc--CCCeEEEEeCCCCCchHHHHHHHHHHH---hCCC--CCcee
Confidence 999999998862 4555555544444321 145799999999999998876554321 1122 24677
Q ss_pred EeCCCC---CChHHHhcCceEEEec-CCHHHHHHHHHHHHHcCCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 018506 173 LDAPVS---GGVLAAEAGTLTFMVG-GSEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLG 248 (355)
Q Consensus 173 ~~~pv~---g~~~~~~~g~~~~~~g-g~~~~~~~v~~ll~~~g~~~~~~g~~g~a~~~Kl~~n~~~~~~~~~~~Ea~~la 248 (355)
...|.+ |...........+++| .++++.+.++++++.+...++.+ ++..|++.|++.|.+.++.+++++|...+|
T Consensus 171 ~~~PErl~eG~a~~d~~~~~riViG~~~~~a~~~~~~ly~~~~~~~~~~-~~~~AE~~Kl~eN~~ravnIa~~NEla~ic 249 (444)
T 3vtf_A 171 ASNPEFLREGSALEDFFKPDRIVIGAGDERAASFLLDVYKAVDAPKLVM-KPREAELVKYASNVFLALKISFANEVGLLA 249 (444)
T ss_dssp EECCCCCCTTSHHHHHHSCSCEEEEESSHHHHHHHHHHTTTSCSCEEEE-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCcccccCCccccccccCCcEEEcCCCHHHHHHHHHHHhccCCCEEEe-chhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 788876 4444444444455655 47778899999999988766554 557999999999999999999999999999
Q ss_pred HHcCCCHHHHHHHHHhcCCCcccccCCCCCCCcccCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhCCCChHHHHHHHHH
Q 018506 249 QSLGISASTLTKILNSSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIY 328 (355)
Q Consensus 249 ~~~Gi~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~gv~~pi~~~~~~~~ 328 (355)
+++|+|..++.++++.... +....+ .-++|++..|+.||..++...+++.|++.++++++.++-
T Consensus 250 e~~GiDv~eV~~a~~~d~r--ig~~~l--------------~PG~G~GG~CipkD~~~L~~~a~~~g~~~~li~a~~~iN 313 (444)
T 3vtf_A 250 KRLGVDTYRVFEAVGLDKR--IGRHYF--------------GAGLGFGGSCFPKDTLAFIRFGESLGLEMAISKAVLRVN 313 (444)
T ss_dssp HHTTCCHHHHHHHHHTSTT--SCSTTC--------------CCSSCCCTTTHHHHHHHHHHHHHHTTCCCHHHHHHHHHH
T ss_pred HHcCCCHHHHHHHhccCCC--CCCCCC--------------CCCCCCCCcccCcCHHHHHHHHHhcCCCHHHHHhhHHHH
Confidence 9999999999999975321 111111 113567889999999999999999999999999988766
Q ss_pred HH
Q 018506 329 AK 330 (355)
Q Consensus 329 ~~ 330 (355)
+.
T Consensus 314 ~~ 315 (444)
T 3vtf_A 314 EY 315 (444)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 38
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=99.96 E-value=5.2e-29 Score=234.28 Aligned_cols=299 Identities=16% Similarity=0.121 Sum_probs=206.0
Q ss_pred ccCCCCCCCCCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCC--------------CCCCCCHHHHhh
Q 018506 35 FFSSQVPSCQFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMG--------------VPTKETPFEVAE 100 (355)
Q Consensus 35 ~~~~~~~~~~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g--------------~~~~~s~~e~~~ 100 (355)
|+.+++..+.+|||+|||+|.||+++|..|+++||+|++|+|++++++.+++.+ +..++++.++++
T Consensus 19 ~~~~~~m~~~~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~ 98 (356)
T 3k96_A 19 YFQSNAMEPFKHPIAILGAGSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLE 98 (356)
T ss_dssp --------CCCSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHT
T ss_pred hhhhhcccccCCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEECCHHHHHh
Confidence 333333334568999999999999999999999999999999999999887743 234578889999
Q ss_pred cCCEEEEeCCCchHHHHHhcCCCccccCCCCCCCeEEEEcCCCC-HHHHHHHHHHHhhchhhhccCCCCCceEEeCCCCC
Q 018506 101 ASDVVITMLPSSSHVLDVYNGPNGLLQGGNSVRPQLLIDSSTID-PQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSG 179 (355)
Q Consensus 101 ~aDiVi~~v~~~~~~~~vl~~~~~~l~~~~~~~~~ivi~~st~~-~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~pv~g 179 (355)
++|+||+++|. +.+++++..+.+.+. +++++|+++++. +.+ +.+.+.+.+. + ++ ..+.++++|.+.
T Consensus 99 ~aDvVilaVp~-~~~~~vl~~i~~~l~-----~~~ivvs~~kGi~~~t-~~~se~i~~~-l---~~--~~~~vlsgP~~a 165 (356)
T 3k96_A 99 GVTDILIVVPS-FAFHEVITRMKPLID-----AKTRIAWGTKGLAKGS-RLLHEVVATE-L---GQ--VPMAVISGPSLA 165 (356)
T ss_dssp TCCEEEECCCH-HHHHHHHHHHGGGCC-----TTCEEEECCCSCBTTT-BCHHHHHHHH-H---CS--CCEEEEESSCCH
T ss_pred cCCEEEECCCH-HHHHHHHHHHHHhcC-----CCCEEEEEeCCCCcCc-cCHHHHHHHH-c---CC--CCEEEEECccHH
Confidence 99999999996 588999887666653 456888887754 443 3344433321 1 11 125688999876
Q ss_pred ChHHHhcCceEEEecCCHHHHHHHHHHHHHcCCCeEEeCCcch-----------------HHHHHHHHHHHHHHHHHHHH
Q 018506 180 GVLAAEAGTLTFMVGGSEDAYQAAKPLFLSMGKNTIYCGGAGN-----------------GAAAKICNNLTMAVSMLGVS 242 (355)
Q Consensus 180 ~~~~~~~g~~~~~~gg~~~~~~~v~~ll~~~g~~~~~~g~~g~-----------------a~~~Kl~~n~~~~~~~~~~~ 242 (355)
........+..++.+.+++..+.++++|+..+.+++...++-. +..+|+..|...+.+..+++
T Consensus 166 ~ev~~g~pt~~via~~~~~~~~~v~~lf~~~~~rv~~~~Di~g~e~~galkNviaia~G~~~gl~~g~N~~aal~~~~l~ 245 (356)
T 3k96_A 166 TEVAANLPTAVSLASNNSQFSKDLIERLHGQRFRVYKNDDMIGVELCGSVKNILAIATGISDGLKLGSNARAALITRGLT 245 (356)
T ss_dssp HHHHTTCCEEEEEEESCHHHHHHHHHHHCCSSEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred HHHHcCCCeEEEEecCCHHHHHHHHHHhCCCCeeEEEeCCHHHHHHHHHHHHHHHHHHHHHhhccCCchHHHHHHHHHHH
Confidence 6555555555666778999999999999999988887777433 33456777778888999999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHhcCC--CcccccCCCCCCCcc--cCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhCCCC
Q 018506 243 EALTLGQSLGISASTLTKILNSSSA--RCWSSDSYNPVPGVM--EGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDC 318 (355)
Q Consensus 243 Ea~~la~~~Gi~~~~~~~~~~~~~~--~s~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~gv~~ 318 (355)
|+.+++++.|++++++.++...++. ++.....+++..+.. +|+..+.-...-..+....++.+.+.++++++|+++
T Consensus 246 E~~~l~~a~G~~~~t~~gl~g~gDl~~tc~s~~sRN~~~G~~l~~g~~~~~~~~~~~~~~eG~~t~~~~~~la~~~~v~~ 325 (356)
T 3k96_A 246 EMGRLVSVFGGKQETLTGLAGLGDLVLTCTDNQSRNRRFGLALGEGVDKKEAQQAIGQAIEGLYNTDQVHALAQKHAIEM 325 (356)
T ss_dssp HHHHHHHHTTCCHHHHTSTTTHHHHHHHHHCTTCHHHHHHHHHHHTCCHHHHHHHHCSCCSHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHhCCChHhhcccchhhHHHHhccCCCCccHHHHHHHHCCCCHHHHHHHcCCccchHHHHHHHHHHHHHcCCCC
Confidence 9999999999999998865333321 111101111111111 110000000000134467788999999999999999
Q ss_pred hHHHHHHHHHHHHHHCCCCCCcHHHHHHHHhcCCC
Q 018506 319 PLTSQAQDIYAKLCENGHDSKDFSCVFQHYYGGKD 353 (355)
Q Consensus 319 pi~~~~~~~~~~~~~~g~g~~d~~~~~~~~~~~~~ 353 (355)
|+++++++++. ++.+....++.+..+..
T Consensus 326 Pi~~~v~~il~-------~~~~~~~~~~~l~~r~~ 353 (356)
T 3k96_A 326 PLTFQVHRILH-------EDLDPQQAVQELLERSP 353 (356)
T ss_dssp HHHHHHHHHHH-------SCCCHHHHHHHHHSCC-
T ss_pred cHHHHHHHHHh-------CCCCHHHHHHHHHcCCC
Confidence 99999999986 66677777777766543
No 39
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=99.94 E-value=2.5e-26 Score=212.78 Aligned_cols=268 Identities=13% Similarity=0.127 Sum_probs=188.0
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCC------------CCHHHHhh---cCCEEEEe
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTK------------ETPFEVAE---ASDVVITM 108 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~------------~s~~e~~~---~aDiVi~~ 108 (355)
.||||+|||+|.||+.+|..|+++||+|++|+|++++++.+.+.|.... .+..++.+ ++|+||+|
T Consensus 2 ~~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 81 (316)
T 2ew2_A 2 NAMKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIAL 81 (316)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEEC
T ss_pred CCCeEEEECcCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCCEEEEE
Confidence 4689999999999999999999999999999999999998877553221 13445444 89999999
Q ss_pred CCCchHHHHHhcCCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCceEEeCCCCCC--hHHHhc
Q 018506 109 LPSSSHVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGG--VLAAEA 186 (355)
Q Consensus 109 v~~~~~~~~vl~~~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~pv~g~--~~~~~~ 186 (355)
+|. ..+++++..+.+.+. ++++|++++++.. ..+.+.+.+++..+. . +..+..++..++ +.....
T Consensus 82 v~~-~~~~~v~~~l~~~l~-----~~~~iv~~~~g~~-~~~~l~~~~~~~~vi--~----g~~~~~~~~~~p~~~~~~~~ 148 (316)
T 2ew2_A 82 TKA-QQLDAMFKAIQPMIT-----EKTYVLCLLNGLG-HEDVLEKYVPKENIL--V----GITMWTAGLEGPGRVKLLGD 148 (316)
T ss_dssp SCH-HHHHHHHHHHGGGCC-----TTCEEEECCSSSC-THHHHTTTSCGGGEE--E----EEECCCCEEEETTEEEECSC
T ss_pred ecc-ccHHHHHHHHHHhcC-----CCCEEEEecCCCC-cHHHHHHHcCCccEE--E----EEeeeeeEEcCCCEEEEecC
Confidence 996 478888876655543 4578999887543 234444444321100 0 122333333331 222345
Q ss_pred CceEEEe--cCCHHHHHHHHHHHHHcCCCeEEeCCcchHHHHHHHHHHHH---------------------HHHHHHHHH
Q 018506 187 GTLTFMV--GGSEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTM---------------------AVSMLGVSE 243 (355)
Q Consensus 187 g~~~~~~--gg~~~~~~~v~~ll~~~g~~~~~~g~~g~a~~~Kl~~n~~~---------------------~~~~~~~~E 243 (355)
+.+.+.. +++++..+.++++|+.+|.++++.++.+.+.|.|++.|... ..+..++.|
T Consensus 149 g~~~i~~~~~~~~~~~~~~~~ll~~~g~~~~~~~d~~~~~~~Kl~~N~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~E 228 (316)
T 2ew2_A 149 GEIELENIDPSGKKFALEVVDVFQKAGLNPSYSSNVRYSIWRKACVNGTLNGLCTILDCNIAEFGALPVSESLVKTLISE 228 (316)
T ss_dssp CCEEEEESSGGGHHHHHHHHHHHHHTTCCEEECTTHHHHHHHHHHHHTTHHHHHHHHTCCHHHHHTSTTHHHHHHHHHHH
T ss_pred CcEEEeecCCCccHHHHHHHHHHHhCCCCcEEchhHHHHHHHHHHHhhhHHHHHHHhCCcHHHHHhCHHHHHHHHHHHHH
Confidence 6655543 45788899999999999999889999999999999999642 456788999
Q ss_pred HHHHHHHcCCCH--HHHHHHHHhcCCCcccccCCCCCCCcccCCCCCCCC-CCCcchhhHHHHHHHHHHHHHHhCCCChH
Q 018506 244 ALTLGQSLGISA--STLTKILNSSSARCWSSDSYNPVPGVMEGVPASRNY-GGGFASKLMAKDLNLALASAKEVGVDCPL 320 (355)
Q Consensus 244 a~~la~~~Gi~~--~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~kd~~~~~~~a~~~gv~~pi 320 (355)
++.++++.|+++ +.+.+.+............. +.+. .|+ ..++..+ ..+++++++++++++|+++|+
T Consensus 229 ~~~la~~~G~~~~~~~~~~~~~~~~~~~~~~~~~---~sm~------~d~~~~g~~~E-~~~~~~~~~~~a~~~gv~~P~ 298 (316)
T 2ew2_A 229 FAAVAEKEAIYLDQAEVYTHIVQTYDPNGIGLHY---PSMY------QDLIKNHRLTE-IDYINGAVWRKGQKYNVATPF 298 (316)
T ss_dssp HHHHHHHTTCCCCHHHHHHHHHHTTCTTTTTTSC---CHHH------HHHTTTCCCCS-GGGTHHHHHHHHHHHTCCCHH
T ss_pred HHHHHHHcCCCCChHHHHHHHHHHhccccCCCCC---cHHH------HHHHHcCCcch-HHHHhhHHHHHHHHhCCCCCH
Confidence 999999999986 56667776532111001111 1111 234 4445445 789999999999999999999
Q ss_pred HHHHHHHHHHHHHC
Q 018506 321 TSQAQDIYAKLCEN 334 (355)
Q Consensus 321 ~~~~~~~~~~~~~~ 334 (355)
++.++++++..+..
T Consensus 299 ~~~~~~~~~~~~~~ 312 (316)
T 2ew2_A 299 CAMLTQLVHGKEEL 312 (316)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999987654
No 40
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=99.93 E-value=1.4e-26 Score=219.39 Aligned_cols=298 Identities=13% Similarity=0.099 Sum_probs=188.8
Q ss_pred ccccCCCCCCCCCc-eEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCC--------------CCCCCCHHH
Q 018506 33 RRFFSSQVPSCQFE-SVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMG--------------VPTKETPFE 97 (355)
Q Consensus 33 ~~~~~~~~~~~~~m-kIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g--------------~~~~~s~~e 97 (355)
+.|..+....+.+| ||+|||+|+||.++|..|+++||+|++|||++++++.+.+.+ +..++++.+
T Consensus 2 ~~~~~~~~~~~m~M~kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (366)
T 1evy_A 2 STKQHSAKDELLYLNKAVVFGSGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEK 81 (366)
T ss_dssp -------CCCCCCEEEEEEECCSHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHH
T ss_pred ccchhhhhhHhhccCeEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccccccccccceeeeCCHHH
Confidence 34555444334434 999999999999999999999999999999999998887642 234567888
Q ss_pred HhhcCCEEEEeCCCchHHHHHhcC----CCccccCCCCCC-CeEEEEcCC-CCHHHHHHHHHHHhhchhhhccCCCCCce
Q 018506 98 VAEASDVVITMLPSSSHVLDVYNG----PNGLLQGGNSVR-PQLLIDSST-IDPQTSRNISAAVSNCILKEKKDSWENPV 171 (355)
Q Consensus 98 ~~~~aDiVi~~v~~~~~~~~vl~~----~~~~l~~~~~~~-~~ivi~~st-~~~~~~~~l~~~~~~~~~~~~~g~~~~~~ 171 (355)
+++++|+||+|+|+ .++++++.. +.+.+. + +++||++++ ..+...+.+.+.+.+. .+. ....
T Consensus 82 ~~~~aDvVilav~~-~~~~~v~~~~~~gl~~~l~-----~~~~ivv~~~~gi~~~~~~~~~~~l~~~-----~~~-~~~~ 149 (366)
T 1evy_A 82 AYNGAEIILFVIPT-QFLRGFFEKSGGNLIAYAK-----EKQVPVLVCTKGIERSTLKFPAEIIGEF-----LPS-PLLS 149 (366)
T ss_dssp HHTTCSSEEECCCH-HHHHHHHHHHCHHHHHHHH-----HHTCCEEECCCSCCTTTCCCHHHHHTTT-----SCG-GGEE
T ss_pred HHcCCCEEEECCCh-HHHHHHHHHhHHHHHHhcC-----ccCCEEEEECCcCCCccccCHHHHHHHH-----CCC-CcEE
Confidence 88999999999996 688888876 544442 3 568888884 4554444455554321 110 0134
Q ss_pred EEeCCCCCChHHHhcCceEEEecCCHHHHHHHHHHHHHc--CCCeEEeCCcchHHHHHHH-----------------HHH
Q 018506 172 MLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAAKPLFLSM--GKNTIYCGGAGNGAAAKIC-----------------NNL 232 (355)
Q Consensus 172 ~~~~pv~g~~~~~~~g~~~~~~gg~~~~~~~v~~ll~~~--g~~~~~~g~~g~a~~~Kl~-----------------~n~ 232 (355)
+...|..............++.+++++..+.++++|+.. +.++++.+++-...|.|++ +|.
T Consensus 150 v~~gp~~~~~~~~g~~~~~~~~~~~~~~~~~v~~ll~~~g~g~~~~~~~di~~~~~~k~~~n~~~~~~~~~~~~~~~~n~ 229 (366)
T 1evy_A 150 VLAGPSFAIEVATGVFTCVSIASADINVARRLQRIMSTGDRSFVCWATTDTVGCEVASAVKNVLAIGSGVANGLGMGLNA 229 (366)
T ss_dssp EEESSCCHHHHHTTCCEEEEEECSSHHHHHHHHHHHSCTTSSEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHH
T ss_pred EEeCCChHHHHHhCCceEEEEecCCHHHHHHHHHHhcCCCCeEEEEEcCCchHHHHHHHHHhHHHHHHHHHhhccCCccH
Confidence 555665432222222233455567888999999999999 8777777875455555544 555
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcC----CCcccccCCCCCCCcccCCCCCCCC-CCCcchhhHHHHHHHH
Q 018506 233 TMAVSMLGVSEALTLGQSLGISASTLTKILNSSS----ARCWSSDSYNPVPGVMEGVPASRNY-GGGFASKLMAKDLNLA 307 (355)
Q Consensus 233 ~~~~~~~~~~Ea~~la~~~Gi~~~~~~~~~~~~~----~~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~kd~~~~ 307 (355)
.......++.|++.++++.|++++++.++...+. ..++.+..+.....+..++..+ +. ...+......||++.+
T Consensus 230 ~~~~~~~~~~E~~~la~a~Gi~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~e~~~~~~~v 308 (366)
T 1evy_A 230 RAALIMRGLLEIRDLTAALGGDGSAVFGLAGLGDLQLTCSSELSRNFTVGKKLGKGLPIE-EIQRTSKAVAEGVATADPL 308 (366)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCTTTTSTTTHHHHHHHHTCTTSHHHHHHHHHHTTCCHH-HHHC---CCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCccccccccchhheeeecCCCCchHHHHHHHhCCCCHH-HHHHHcCCeeehHHHHHHH
Confidence 6677789999999999999999876643211100 0011111000000111110000 00 0012233567999999
Q ss_pred HHHHHHhCCCChHHHHHHHHHHHHHHCCCCCCcHHHHHHHHhc
Q 018506 308 LASAKEVGVDCPLTSQAQDIYAKLCENGHDSKDFSCVFQHYYG 350 (355)
Q Consensus 308 ~~~a~~~gv~~pi~~~~~~~~~~~~~~g~g~~d~~~~~~~~~~ 350 (355)
+++++++|+++|+++.++++++. ..+...+++.+..
T Consensus 309 ~~~a~~~gv~~P~~~~v~~~~~~-------~~~~~~~~~~l~~ 344 (366)
T 1evy_A 309 MRLAKQLKVKMPLCHQIYEIVYK-------KKNPRDALADLLS 344 (366)
T ss_dssp HHHHHHHTCCCHHHHHHHHHHHS-------CCCHHHHHHHHGG
T ss_pred HHHHHHhCCCCcHHHHHHHHHHC-------CCCHHHHHHHHHc
Confidence 99999999999999999998873 3455566665544
No 41
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=99.92 E-value=4.5e-25 Score=206.52 Aligned_cols=280 Identities=13% Similarity=0.116 Sum_probs=186.9
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCC-----------CCCCCCHHHHhhcCCEEEEeCCCc
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMG-----------VPTKETPFEVAEASDVVITMLPSS 112 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g-----------~~~~~s~~e~~~~aDiVi~~v~~~ 112 (355)
..|||+|||+|+||++|+.+|+++||+|++|+|++++++.+++.| +..++++.+ ++.+|+||+|||+
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~-~~~aDvVil~vk~- 90 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENGEEVILWARRKEIVDLINVSHTSPYVEESKITVRATNDLEE-IKKEDILVIAIPV- 90 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHSCBTTBTTCCCCSEEESCGGG-CCTTEEEEECSCG-
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCCcccCCCCeeeEEEeCCHHH-hcCCCEEEEECCH-
Confidence 458999999999999999999999999999999999999998765 355678888 8899999999996
Q ss_pred hHHHHHhcCCCccccCCCCCCCeEEEEcCCC-CHHHHHHHHHHHhhchhhhccCCCCCceEEeCCCCCChHHHhcCceE-
Q 018506 113 SHVLDVYNGPNGLLQGGNSVRPQLLIDSSTI-DPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLT- 190 (355)
Q Consensus 113 ~~~~~vl~~~~~~l~~~~~~~~~ivi~~st~-~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~pv~g~~~~~~~g~~~- 190 (355)
.++++++..+.+ +++++|+++++ .+.+.+.+.+.+.+. .+ ....+...|... .....+.+.
T Consensus 91 ~~~~~v~~~l~~--------~~~~vv~~~nGi~~~~~~~l~~~~~~~-----~~--~~~~~~~~P~~~--~~~~~g~~~~ 153 (335)
T 1z82_A 91 QYIREHLLRLPV--------KPSMVLNLSKGIEIKTGKRVSEIVEEI-----LG--CPYAVLSGPSHA--EEVAKKLPTA 153 (335)
T ss_dssp GGHHHHHTTCSS--------CCSEEEECCCCCCTTTCCCHHHHHHHH-----TC--CCEEEEESSCCH--HHHHTTCCEE
T ss_pred HHHHHHHHHhCc--------CCCEEEEEeCCCCCCccCcHHHHHHHH-----cC--CceEEEECCccH--HHHhCCCceE
Confidence 699999876432 34689999854 555445566665431 11 124556667542 223345533
Q ss_pred EEecCCHHHHHHHHHHHHHcCCCeEEeCCcchHHHHHHH-----------------HHHHHHHHHHHHHHHHHHHHHcCC
Q 018506 191 FMVGGSEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKIC-----------------NNLTMAVSMLGVSEALTLGQSLGI 253 (355)
Q Consensus 191 ~~~gg~~~~~~~v~~ll~~~g~~~~~~g~~g~a~~~Kl~-----------------~n~~~~~~~~~~~Ea~~la~~~Gi 253 (355)
+..++++ ++.++++|+..+.++++.+++-...|-|++ +|........++.|++.++++.|+
T Consensus 154 ~~~g~~~--~~~~~~ll~~~g~~~~~~~di~~~~~~k~l~N~~~~~~g~~~g~~~~~n~~~a~~~~~~~E~~~la~a~G~ 231 (335)
T 1z82_A 154 VTLAGEN--SKELQKRISTEYFRVYTCEDVVGVEIAGALKNVIAIAAGILDGFGGWDNAKAALETRGIYEIARFGMFFGA 231 (335)
T ss_dssp EEEEETT--HHHHHHHHCCSSEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEEehh--HHHHHHHhCCCCEEEEecCchHHHHHHHHHHhHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHhCC
Confidence 3334333 788999999999888877775444454444 444556677899999999999999
Q ss_pred CHHHHHHHHHhcC----CCcccccCCCCCCCcccCCCCCCCC-CCCcchhhHHHHHHHHHHHHHHhCCCChHHHHHHHHH
Q 018506 254 SASTLTKILNSSS----ARCWSSDSYNPVPGVMEGVPASRNY-GGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIY 328 (355)
Q Consensus 254 ~~~~~~~~~~~~~----~~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~kd~~~~~~~a~~~gv~~pi~~~~~~~~ 328 (355)
+++++.++...+. ..++....+.....+..++..+ +. ...+......||++.+++++++.|+++|+++++++++
T Consensus 232 ~~~~~~~l~~~~~~~~t~~s~~~~n~~~~~~~~~g~~~~-~~~~~~g~~~e~~~~~~~v~~~a~~~gv~~P~~~~v~~~~ 310 (335)
T 1z82_A 232 DQKTFMGLAGIGDLMVTCNSRYSRNRRFGELIARGFNPL-KLLESSNQVVEGAFTVKAVMKIAKENKIDMPISEEVYRVV 310 (335)
T ss_dssp CHHHHTSTTTHHHHHHHHHCTTCHHHHHHHHHHHTCCHH-HHHHTCSSCCTHHHHHHHHHHHHHHTTCCCHHHHHHHHHH
T ss_pred ChhhhcccccccceeeeccCccCcHHHHHHHHhCCCCHH-HHHHhcCCeeeHHHHHHHHHHHHHHhCCCCcHHHHHHHHH
Confidence 9988765321100 0011100000000011110000 00 0012234567999999999999999999999999988
Q ss_pred HHHHHCCCCCCcHHHHHHHHhcCC
Q 018506 329 AKLCENGHDSKDFSCVFQHYYGGK 352 (355)
Q Consensus 329 ~~~~~~g~g~~d~~~~~~~~~~~~ 352 (355)
+ ...+...+++.+..+.
T Consensus 311 ~-------~~~~~~~~~~~l~~~~ 327 (335)
T 1z82_A 311 Y-------EGKPPLQSMRDLMRRS 327 (335)
T ss_dssp H-------SCCCHHHHHHHHHC--
T ss_pred h-------CCCCHHHHHHHHHcCC
Confidence 5 4556777777766543
No 42
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=99.91 E-value=9.3e-25 Score=202.56 Aligned_cols=260 Identities=11% Similarity=0.067 Sum_probs=173.4
Q ss_pred CCceEEEEcccHHhHHHHHHHHHC-----C-CcEEEEeCChhHHHHHHh-CCCCCCC-------------CHHHHhhcCC
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKA-----G-YKMAVHDVNCNVMKMFSD-MGVPTKE-------------TPFEVAEASD 103 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~-----G-~~V~v~dr~~~~~~~l~~-~g~~~~~-------------s~~e~~~~aD 103 (355)
.+|||+|||+|.||+++|..|+++ | |+|++|+| +++++.+++ .|+.... +..+.++.+|
T Consensus 7 ~~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r-~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~D 85 (317)
T 2qyt_A 7 QPIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR-GAHLEAIRAAGGLRVVTPSRDFLARPTCVTDNPAEVGTVD 85 (317)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC-HHHHHHHHHHTSEEEECSSCEEEECCSEEESCHHHHCCEE
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc-HHHHHHHHhcCCeEEEeCCCCeEEecceEecCccccCCCC
Confidence 347999999999999999999999 9 99999999 888999988 6654432 3445678999
Q ss_pred EEEEeCCCchHHHHHhcCCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCceEEeCCCCC--Ch
Q 018506 104 VVITMLPSSSHVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSG--GV 181 (355)
Q Consensus 104 iVi~~v~~~~~~~~vl~~~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~pv~g--~~ 181 (355)
+||+|+|.. ++++++..+.+.+. ++++||+++++. ...+.+.+.++... ...+..+.++++.+ ..
T Consensus 86 ~vil~vk~~-~~~~v~~~i~~~l~-----~~~~iv~~~nG~-~~~~~l~~~l~~~~------v~~g~~~~~a~~~~pg~~ 152 (317)
T 2qyt_A 86 YILFCTKDY-DMERGVAEIRPMIG-----QNTKILPLLNGA-DIAERMRTYLPDTV------VWKGCVYISARKSAPGLI 152 (317)
T ss_dssp EEEECCSSS-CHHHHHHHHGGGEE-----EEEEEEECSCSS-SHHHHHTTTSCTTT------BCEEEEEEEEEEEETTEE
T ss_pred EEEEecCcc-cHHHHHHHHHhhcC-----CCCEEEEccCCC-CcHHHHHHHCCCCc------EEEEEEEEEEEEcCCCEE
Confidence 999999986 67888876555543 346888887764 33344444443210 01124455666553 22
Q ss_pred HHHhcCceEEEe----cCCHHHHHHHHHHHHHcCCCeEEeCCcchHHHHHHHHHHHHH-------------------HHH
Q 018506 182 LAAEAGTLTFMV----GGSEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMA-------------------VSM 238 (355)
Q Consensus 182 ~~~~~g~~~~~~----gg~~~~~~~v~~ll~~~g~~~~~~g~~g~a~~~Kl~~n~~~~-------------------~~~ 238 (355)
.....+...++. +++.+.. .++++|+..|.++++.++++.+.|.|++.|.... ...
T Consensus 153 ~~~~~g~~~~ig~~~~~~~~~~~-~~~~ll~~~g~~~~~~~di~~~~~~Kl~~N~~~~~~~al~g~~~g~~~~~~~~~~~ 231 (317)
T 2qyt_A 153 TLEADRELFYFGSGLPEQTDDEV-RLAELLTAAGIRAYNPTDIDWYIMKKFMMISVTATATAYFDKPIGSILTEHEPELL 231 (317)
T ss_dssp EEEEEEEEEEEECCSSSCCHHHH-HHHHHHHHTTCCEECCSCHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHCHHHHH
T ss_pred EEcCCCceEEEcCCCCCCcCHHH-HHHHHHHHCCCCCEEchHHHHHHHHHHHHHHhhHHHHHHHCCCHHHHHHHHHHHHH
Confidence 223344433232 2346777 8999999999988999999999999999998764 345
Q ss_pred HHHHHHHHHHHHcCCCHH--HHHHHHHhcCCCcccccCCC-CCCCcccCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhC
Q 018506 239 LGVSEALTLGQSLGISAS--TLTKILNSSSARCWSSDSYN-PVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVG 315 (355)
Q Consensus 239 ~~~~Ea~~la~~~Gi~~~--~~~~~~~~~~~~s~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~g 315 (355)
.++.|++.++++.|++++ .+.+.+...... ...... +..++..++..+.++ .+++++++++++|
T Consensus 232 ~~~~E~~~v~~a~G~~~~~~~~~~~~~~~~~~--~~~~~~sm~~d~~~g~~~E~~~-----------~~g~~~~~a~~~g 298 (317)
T 2qyt_A 232 SLLEEVAELFRAKYGQVPDDVVQQLLDKQRKM--PPESTSSMHSDFLQGGSTEVET-----------LTGYVVREAEALR 298 (317)
T ss_dssp HHHHHHHHHHHHHTSCCCSSHHHHHHHHHHHC----------------------CT-----------TTHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcCCCCChHHHHHHHHHHhcc--CCCCCChHHHHHHcCCccCHHH-----------HhhHHHHHHHHcC
Confidence 889999999999999864 566666542110 001111 111122222221111 2678999999999
Q ss_pred CCChHHHHHHHHHHHH
Q 018506 316 VDCPLTSQAQDIYAKL 331 (355)
Q Consensus 316 v~~pi~~~~~~~~~~~ 331 (355)
+++|+++.++++++..
T Consensus 299 v~~P~~~~~~~~~~~~ 314 (317)
T 2qyt_A 299 VDLPMYKRMYRELVSR 314 (317)
T ss_dssp CCCHHHHHHHHTTCC-
T ss_pred CCCCHHHHHHHHHHHH
Confidence 9999999999887643
No 43
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=99.91 E-value=1.7e-23 Score=195.65 Aligned_cols=269 Identities=14% Similarity=0.066 Sum_probs=187.5
Q ss_pred ceEEEEcccHHhHHHHHHHHHCCCcEEEEeC--ChhHHHHHHhCCC-----------CCCC--CHHHHhhcCCEEEEeCC
Q 018506 46 ESVGFIGLGNMGFRMASNLMKAGYKMAVHDV--NCNVMKMFSDMGV-----------PTKE--TPFEVAEASDVVITMLP 110 (355)
Q Consensus 46 mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr--~~~~~~~l~~~g~-----------~~~~--s~~e~~~~aDiVi~~v~ 110 (355)
|||+|||+|.||+++|..|+++||+|++|+| ++++++.+.+.+. ..++ ++.++++++|+||+|+|
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~D~vi~~v~ 80 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGVS 80 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHHhcCCEEEEcCC
Confidence 6899999999999999999999999999999 9999999887653 2344 67788889999999999
Q ss_pred CchHHHHHhcCCCccccCCCCCCCeEEEEcCCCC----HHHHHHHHHHHhhchhhhccCCCCCceEEeCCCCCChHHHhc
Q 018506 111 SSSHVLDVYNGPNGLLQGGNSVRPQLLIDSSTID----PQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEA 186 (355)
Q Consensus 111 ~~~~~~~vl~~~~~~l~~~~~~~~~ivi~~st~~----~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~pv~g~~~~~~~ 186 (355)
.+ ++++++..+.+ +. ++++||+++++. |...+.+.+.+++. .++.. ...+...|.. ......
T Consensus 81 ~~-~~~~v~~~i~~-l~-----~~~~vv~~~ng~~~~~~~~~~~l~~~~~~~----~g~~~-~~~~~~~p~~--~~~~~~ 146 (335)
T 1txg_A 81 TD-GVLPVMSRILP-YL-----KDQYIVLISKGLIDFDNSVLTVPEAVWRLK----HDLRE-RTVAITGPAI--AREVAK 146 (335)
T ss_dssp GG-GHHHHHHHHTT-TC-----CSCEEEECCCSEEEETTEEEEHHHHHHTTS----TTCGG-GEEEEESSCC--HHHHHT
T ss_pred hH-HHHHHHHHHhc-CC-----CCCEEEEEcCcCccCCCCcCccHHHHHHHh----cCCCC-cEEEEECCCc--HHHHHc
Confidence 76 78888876555 43 456888988543 34445566666431 01100 1233444532 222333
Q ss_pred Cc--eEEEecCCHHHHHHHHHHHHHcCCCeEEeCCcchHHHH-----------------HHH-----HHHHHHHHHHHHH
Q 018506 187 GT--LTFMVGGSEDAYQAAKPLFLSMGKNTIYCGGAGNGAAA-----------------KIC-----NNLTMAVSMLGVS 242 (355)
Q Consensus 187 g~--~~~~~gg~~~~~~~v~~ll~~~g~~~~~~g~~g~a~~~-----------------Kl~-----~n~~~~~~~~~~~ 242 (355)
+. ..++.+.+++..+.++++|+..+.++++.+++....|. |+. +|.....+..++.
T Consensus 147 g~~~~~~~~~~~~~~~~~~~~ll~~~g~~~~~~~di~~~~~~k~~~N~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~ 226 (335)
T 1txg_A 147 RMPTTVVFSSPSESSANKMKEIFETEYFGVEVTTDIIGTEITSALKNVYSIAIAWIRGYESRKNVEMSNAKGVIATRAIN 226 (335)
T ss_dssp TCCEEEEEECSCHHHHHHHHHHHCBTTEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHH
T ss_pred cCCcEEEEEeCCHHHHHHHHHHhCCCcEEEEecCchHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Confidence 43 34455567889999999999999888888887666665 555 6766677888999
Q ss_pred HHHHHHHHcCCCHHHHH------HHHHhcCCCcccccCCCCCCCcccCCCCCCCCCCCcc--------------hhhHHH
Q 018506 243 EALTLGQSLGISASTLT------KILNSSSARCWSSDSYNPVPGVMEGVPASRNYGGGFA--------------SKLMAK 302 (355)
Q Consensus 243 Ea~~la~~~Gi~~~~~~------~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~k 302 (355)
|+..++++.|++++++. +.+..... +.... + ...+.++++ .....|
T Consensus 227 E~~~la~~~G~~~~~~~~~~~~~~~~~~~~~-~~~~~--------~-----~~~~~~~~s~~~d~~~~~~~~~~~~E~~~ 292 (335)
T 1txg_A 227 EMAELIEILGGDRETAFGLSGFGDLIATFRG-GRNGM--------L-----GELLGKGLSIDEAMEELERRGVGVVEGYK 292 (335)
T ss_dssp HHHHHHHHHTSCGGGGGSTTTHHHHHHTTTC-HHHHH--------H-----HHHHHTTCCHHHHHHHHHHTTCCCCHHHH
T ss_pred HHHHHHHHHCCCcchhhcccchhheeecccc-CccHH--------H-----HHHHhCCCCHHHHHHHhccCCceecchHH
Confidence 99999999999987664 44433211 10000 0 001111221 234459
Q ss_pred HHHHHHHHHHHhCCCChHHHHHHHHHHHHHHCCCCCCcHHHHHHHHh
Q 018506 303 DLNLALASAKEVGVDCPLTSQAQDIYAKLCENGHDSKDFSCVFQHYY 349 (355)
Q Consensus 303 d~~~~~~~a~~~gv~~pi~~~~~~~~~~~~~~g~g~~d~~~~~~~~~ 349 (355)
|+++++++++++|+++|+++.++++++. ..+...+++.+.
T Consensus 293 ~~~~~~~~a~~~gv~~P~~~~~~~~~~~-------~~~~~~~~~~l~ 332 (335)
T 1txg_A 293 TAEKAYRLSSKINADTKLLDSIYRVLYE-------GLKVEEVLFELA 332 (335)
T ss_dssp HHHHHHHHHHHTTCCCHHHHHHHHHHHS-------CCCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCcHHHHHHHHHhC-------CCCHHHHHHHHH
Confidence 9999999999999999999999998863 236666666554
No 44
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=99.91 E-value=6.1e-25 Score=201.18 Aligned_cols=256 Identities=11% Similarity=0.072 Sum_probs=175.7
Q ss_pred ceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCC--C------CCCCHHHHhhcCCEEEEeCCCchHHHH
Q 018506 46 ESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGV--P------TKETPFEVAEASDVVITMLPSSSHVLD 117 (355)
Q Consensus 46 mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~--~------~~~s~~e~~~~aDiVi~~v~~~~~~~~ 117 (355)
|||+|||+|.||+++|..|+++||+|++|+|++++.+.+...+. . ..++ .+.++++|+||+|+|.+ ++++
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~d~vi~~v~~~-~~~~ 78 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTAND-PDFLATSDLLLVTLKAW-QVSD 78 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESC-HHHHHTCSEEEECSCGG-GHHH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCCEEEEEcCccceeeEEEEcCCCceeeeeeeecC-ccccCCCCEEEEEecHH-hHHH
Confidence 68999999999999999999999999999999887665544321 1 1233 46778999999999986 6788
Q ss_pred HhcCCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCceEEeCCCCCChHHHhcCceEEEe-cCC
Q 018506 118 VYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMV-GGS 196 (355)
Q Consensus 118 vl~~~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~pv~g~~~~~~~g~~~~~~-gg~ 196 (355)
++..+.+.+. ++++|++++++. ...+.+.+.+++ + ..|......+.+.| . +.....|.+.+.. +++
T Consensus 79 v~~~l~~~l~-----~~~~vv~~~~g~-~~~~~l~~~~~~--~--~~g~~~~~~~~~~p-~--~~~~~~g~~~i~~~~~~ 145 (291)
T 1ks9_A 79 AVKSLASTLP-----VTTPILLIHNGM-GTIEELQNIQQP--L--LMGTTTHAARRDGN-V--IIHVANGITHIGPARQQ 145 (291)
T ss_dssp HHHHHHTTSC-----TTSCEEEECSSS-CTTGGGTTCCSC--E--EEEEECCEEEEETT-E--EEEEECCCEEEEESSGG
T ss_pred HHHHHHhhCC-----CCCEEEEecCCC-CcHHHHHHhcCC--e--EEEEEeEccEEcCC-E--EEEecccceEEccCCCC
Confidence 8876544442 456888886654 222333333221 0 00100001134455 2 3334566655544 456
Q ss_pred HHHHHHHHHHHHHcCCCeEEeCCcchHHHHHHHHHHHH------------------HHHHHHHHHHHHHHHHcCCCH--H
Q 018506 197 EDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTM------------------AVSMLGVSEALTLGQSLGISA--S 256 (355)
Q Consensus 197 ~~~~~~v~~ll~~~g~~~~~~g~~g~a~~~Kl~~n~~~------------------~~~~~~~~Ea~~la~~~Gi~~--~ 256 (355)
++.++.++++|+..|.++++.++++.+.|.|++.|... ..+..++.|++.++++.|++. +
T Consensus 146 ~~~~~~~~~ll~~~g~~~~~~~~~~~~~~~Kl~~n~~~n~~tal~~~~~g~~~~~~~~~~~~~~E~~~va~a~G~~~~~~ 225 (291)
T 1ks9_A 146 DGDYSYLADILQTVLPDVAWHNNIRAELWRKLAVNCVINPLTAIWNCPNGELRHHPQEIMQICEEVAAVIEREGHHTSAE 225 (291)
T ss_dssp GTTCTHHHHHHHTTSSCEEECTTHHHHHHHHHHHHHHHHHHHHHTTCCGGGGGGCHHHHHHHHHHHHHHHHHHTCCCCHH
T ss_pred cchHHHHHHHHHhcCCCCeecHHHHHHHHHHHeeeeeecHHHHHHCCCchHHHhHHHHHHHHHHHHHHHHHHcCCCCCHH
Confidence 67788999999999999999999999999999999988 677889999999999999986 4
Q ss_pred HH----HHHHHhcC-CCcccccCCCCCCCcccCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH
Q 018506 257 TL----TKILNSSS-ARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKL 331 (355)
Q Consensus 257 ~~----~~~~~~~~-~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~gv~~pi~~~~~~~~~~~ 331 (355)
.+ .+++..+. ..+.+. . |+..+...+. ..+.++++++++++|+++|+++.++++++..
T Consensus 226 ~~~~~~~~~~~~~~~~~ssm~------~----------d~~~g~~~e~-~~~~g~~~~~a~~~gv~~P~~~~~~~~~~~~ 288 (291)
T 1ks9_A 226 DLRDYVMQVIDATAENISSML------Q----------DIRALRHTEI-DYINGFLLRRARAHGIAVPENTRLFEMVKRK 288 (291)
T ss_dssp HHHHHHHHHHHHTTTCCCHHH------H----------HHHTTCCCSG-GGTHHHHHHHHHHHTCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCChHH------H----------HHHcCCccHH-HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Confidence 54 33333221 111110 1 1222222221 2467899999999999999999999999876
Q ss_pred HH
Q 018506 332 CE 333 (355)
Q Consensus 332 ~~ 333 (355)
++
T Consensus 289 e~ 290 (291)
T 1ks9_A 289 ES 290 (291)
T ss_dssp HH
T ss_pred hc
Confidence 54
No 45
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=99.91 E-value=3.3e-23 Score=186.82 Aligned_cols=250 Identities=14% Similarity=0.143 Sum_probs=181.7
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhC-CCCCCCCHHHHhhcCCEEEEeCCCchHHHHHhcCC
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDM-GVPTKETPFEVAEASDVVITMLPSSSHVLDVYNGP 122 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~-g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl~~~ 122 (355)
.+|||+|||+|.||..++..|.+.|++|.+|||++++.+.+.+. |+..++++.++++++|+||+|+| +..+++++..+
T Consensus 2 ~~m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~Vi~~v~-~~~~~~v~~~l 80 (259)
T 2ahr_A 2 NAMKIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAMSHQDLIDQVDLVILGIK-PQLFETVLKPL 80 (259)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBCSSHHHHHHTCSEEEECSC-GGGHHHHHTTS
T ss_pred CccEEEEECCCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHcCCEeeCCHHHHHhcCCEEEEEeC-cHhHHHHHHHh
Confidence 45899999999999999999999999999999999999888764 78888899999999999999999 56888887653
Q ss_pred CccccCCCCCCCeEEEEcC-CCCHHHHHHHHHHHhhchhhhccCCCCCceEEeCCCCCChHHHhcCceEEEecC--CHHH
Q 018506 123 NGLLQGGNSVRPQLLIDSS-TIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGG--SEDA 199 (355)
Q Consensus 123 ~~~l~~~~~~~~~ivi~~s-t~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~pv~g~~~~~~~g~~~~~~gg--~~~~ 199 (355)
. +++++++.+ +..++ .+.+.++. +.+++. ++.+.+.....|...++.++ +++.
T Consensus 81 ~---------~~~~vv~~~~~~~~~---~l~~~~~~-----------~~~~v~-~~p~~~~~~~~g~~~i~~~~~~~~~~ 136 (259)
T 2ahr_A 81 H---------FKQPIISMAAGISLQ---RLATFVGQ-----------DLPLLR-IMPNMNAQILQSSTALTGNALVSQEL 136 (259)
T ss_dssp C---------CCSCEEECCTTCCHH---HHHHHHCT-----------TSCEEE-EECCGGGGGTCEEEEEEECTTCCHHH
T ss_pred c---------cCCEEEEeCCCCCHH---HHHHhcCC-----------CCCEEE-EcCCchHHHcCceEEEEcCCCCCHHH
Confidence 1 345888885 45554 34444421 123444 44455555666666666666 8899
Q ss_pred HHHHHHHHHHcCCCeEEeCCcchHHHHHHHH--HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcCCCcc-cccCCC
Q 018506 200 YQAAKPLFLSMGKNTIYCGGAGNGAAAKICN--NLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCW-SSDSYN 276 (355)
Q Consensus 200 ~~~v~~ll~~~g~~~~~~g~~g~a~~~Kl~~--n~~~~~~~~~~~Ea~~la~~~Gi~~~~~~~~~~~~~~~s~-~~~~~~ 276 (355)
++.++++|+.+| .++++++.......++.. |.+...+...++|+ +.+.|++++++.+++..+...++ ......
T Consensus 137 ~~~~~~ll~~~G-~~~~~~~~~~d~~~al~g~~~~~~~~~~~~la~~---~~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~ 212 (259)
T 2ahr_A 137 QARVRDLTDSFG-STFDISEKDFDTFTALAGSSPAYIYLFIEALAKA---GVKNGIPKAKALEIVTQTVLASASNLKTSS 212 (259)
T ss_dssp HHHHHHHHHTTE-EEEECCGGGHHHHHHHHTTHHHHHHHHHHHHHHH---HHHTTCCHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHhCC-CEEEecHHHccHHHHHhccHHHHHHHHHHHHHHH---HHHcCCCHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999 588888866777777643 33333334444444 88999999999999988765554 222111
Q ss_pred CCCCcccCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHH
Q 018506 277 PVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCE 333 (355)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~gv~~pi~~~~~~~~~~~~~ 333 (355)
..|.++. +..++|++++..+.||+ ++.|++..+.+++.+.++++.+
T Consensus 213 ~~p~~l~----~~~~~p~~~~~~~~~~l-------~~~g~~~~~~~a~~~~~~r~~~ 258 (259)
T 2ahr_A 213 QSPHDFI----DAICSPGGTTIAGLMEL-------ERLGLTATVSSAIDKTIDKAKS 258 (259)
T ss_dssp SCHHHHH----HHHCCTTSHHHHHHHHH-------HHHTHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHH----HhCCCCChhHHHHHHHH-------HHCChHHHHHHHHHHHHHHHhc
Confidence 1233321 23567888888777776 4789999999999999888765
No 46
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=99.90 E-value=2.4e-24 Score=196.47 Aligned_cols=190 Identities=15% Similarity=0.176 Sum_probs=145.6
Q ss_pred CceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhC-------CCCCCCCHHHHhhcCCEEEEeCCCchHHHH
Q 018506 45 FESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDM-------GVPTKETPFEVAEASDVVITMLPSSSHVLD 117 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~-------g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~ 117 (355)
.+||+|||+|.||..||.+|+ +||+|++|||++++++.+.+. ++..++++++ +++||+||.|+|++.+++.
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~~~~~~~~~~l~~~~~~~i~~~~~~~~-~~~aDlVieavpe~~~vk~ 89 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSEKALEAAREQIPEELLSKIEFTTTLEK-VKDCDIVMEAVFEDLNTKV 89 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHSCGGGGGGEEEESSCTT-GGGCSEEEECCCSCHHHHH
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCHHHHHHHHHHHHHHHhCCeEEeCCHHH-HcCCCEEEEcCcCCHHHHH
Confidence 478999999999999999999 999999999999999888765 6666778876 7899999999999998888
Q ss_pred HhcCCCccccCCCCCCCeEE-EEcCCCCHHHHHHHHHHHhhchhhhccCCCCCceEEeCCCCCChHHHhcCceEEEecC-
Q 018506 118 VYNGPNGLLQGGNSVRPQLL-IDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGG- 195 (355)
Q Consensus 118 vl~~~~~~l~~~~~~~~~iv-i~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~pv~g~~~~~~~g~~~~~~gg- 195 (355)
++... +.. . ++.++ .|+||.++.......+... . +.+.||++ |+.+ +.+..++.+
T Consensus 90 ~l~~~---l~~--~-~~~IlasntSti~~~~~a~~~~~~~-----r----~~G~Hf~~-Pv~~-------~~lveiv~g~ 146 (293)
T 1zej_A 90 EVLRE---VER--L-TNAPLCSNTSVISVDDIAERLDSPS-----R----FLGVHWMN-PPHV-------MPLVEIVISR 146 (293)
T ss_dssp HHHHH---HHT--T-CCSCEEECCSSSCHHHHHTTSSCGG-----G----EEEEEECS-STTT-------CCEEEEEECT
T ss_pred HHHHH---Hhc--C-CCCEEEEECCCcCHHHHHHHhhccc-----c----eEeEEecC-cccc-------CCEEEEECCC
Confidence 76532 222 1 34566 5788888874433211110 1 12378888 5433 234444443
Q ss_pred --CHHHHHHHHHHHHHcCCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcCCCcc
Q 018506 196 --SEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCW 270 (355)
Q Consensus 196 --~~~~~~~v~~ll~~~g~~~~~~g~~g~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gi~~~~~~~~~~~~~~~s~ 270 (355)
++++++.++++++.+|++++++++. |++||++. ..++|++.++++ |++++++.+++..+.+.+|
T Consensus 147 ~t~~~~~~~~~~l~~~lGk~~v~v~d~------fi~Nrll~----~~~~EA~~l~~~-Gv~~e~id~~~~~g~g~~~ 212 (293)
T 1zej_A 147 FTDSKTVAFVEGFLRELGKEVVVCKGQ------SLVNRFNA----AVLSEASRMIEE-GVRAEDVDRVWKHHLGLLY 212 (293)
T ss_dssp TCCHHHHHHHHHHHHHTTCEEEEEESS------CHHHHHHH----HHHHHHHHHHHH-TCCHHHHHHHHHTTHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCeEEEeccc------ccHHHHHH----HHHHHHHHHHHh-CCCHHHHHHHHHhcCCCCC
Confidence 8999999999999999999999974 77777765 358999999999 8899999999987665444
No 47
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=99.90 E-value=7.7e-24 Score=191.34 Aligned_cols=250 Identities=13% Similarity=0.122 Sum_probs=175.3
Q ss_pred ceEEEEcccHHhHHHHHHHHHCC-CcEEEEeCChhHHHHHHhC-CCCCCCCHHHHhhcCCEEEEeCCCchHHHHHhcCCC
Q 018506 46 ESVGFIGLGNMGFRMASNLMKAG-YKMAVHDVNCNVMKMFSDM-GVPTKETPFEVAEASDVVITMLPSSSHVLDVYNGPN 123 (355)
Q Consensus 46 mkIgiIG~G~mG~~ia~~L~~~G-~~V~v~dr~~~~~~~l~~~-g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl~~~~ 123 (355)
|||+|||+|.||..++..|.++| |+|++|||++++++.+.+. |+..+.++.+++ ++|+||+|+| +..+++++..+.
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~~~~g~~~~~~~~~~~-~~D~vi~~v~-~~~~~~v~~~l~ 78 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETSATLPELH-SDDVLILAVK-PQDMEAACKNIR 78 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEESSCCCCC-TTSEEEECSC-HHHHHHHHTTCC
T ss_pred CEEEEECchHHHHHHHHHHHHCCCCeEEEECCCHHHHHHHHHhcCCEEeCCHHHHh-cCCEEEEEeC-chhHHHHHHHhc
Confidence 68999999999999999999999 9999999999999988774 777777888888 9999999999 778999887643
Q ss_pred ccccCCCCCCCeEEEEc-CCCCHHHHHHHHHHHhhchhhhccCCCCCceEEeCCCCCChHHHhcCceEEEecC--CHHHH
Q 018506 124 GLLQGGNSVRPQLLIDS-STIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGG--SEDAY 200 (355)
Q Consensus 124 ~~l~~~~~~~~~ivi~~-st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~pv~g~~~~~~~g~~~~~~gg--~~~~~ 200 (355)
+ . +++|+++ ++..+ +.+.+.++. +.+++.+ +.+.+.....|...++.++ +++.+
T Consensus 79 ~-------~-~~ivv~~~~g~~~---~~l~~~~~~-----------~~~~v~~-~~~~~~~~~~g~~~i~~~~~~~~~~~ 135 (263)
T 1yqg_A 79 T-------N-GALVLSVAAGLSV---GTLSRYLGG-----------TRRIVRV-MPNTPGKIGLGVSGMYAEAEVSETDR 135 (263)
T ss_dssp C-------T-TCEEEECCTTCCH---HHHHHHTTS-----------CCCEEEE-ECCGGGGGTCEEEEEECCTTSCHHHH
T ss_pred c-------C-CCEEEEecCCCCH---HHHHHHcCC-----------CCcEEEE-cCCHHHHHcCceEEEEcCCCCCHHHH
Confidence 2 1 4689998 44554 345554431 1345554 4455555566666677777 88999
Q ss_pred HHHHHHHHHcCCCeEEeC-CcchHHHHHHH--HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcCCCcc-cccCCC
Q 018506 201 QAAKPLFLSMGKNTIYCG-GAGNGAAAKIC--NNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCW-SSDSYN 276 (355)
Q Consensus 201 ~~v~~ll~~~g~~~~~~g-~~g~a~~~Kl~--~n~~~~~~~~~~~Ea~~la~~~Gi~~~~~~~~~~~~~~~s~-~~~~~~ 276 (355)
+.++++|+.+|..+ +++ +-......-+. .+......+..+.|+ +++.|++++++.+++..+...++ ......
T Consensus 136 ~~~~~l~~~~g~~~-~~~~~~~~~~~~al~g~~~~~~~~~~~~l~e~---~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (263)
T 1yqg_A 136 RIADRIMKSVGLTV-WLDDEEKMHGITGISGSGPAYVFYLLDALQNA---AIRQGFDMAEARALSLATFKGAVALAEQTG 211 (263)
T ss_dssp HHHHHHHHTTEEEE-ECSSTTHHHHHHHHTTSHHHHHHHHHHHHHHH---HHHTTCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhCCCEE-EeCChhhccHHHHHHccHHHHHHHHHHHHHHH---HHHcCCCHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999866 777 51111111111 111123334444555 88999999999998876544333 211111
Q ss_pred CCCCcccCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHCC
Q 018506 277 PVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENG 335 (355)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~gv~~pi~~~~~~~~~~~~~~g 335 (355)
..|..+ .+..+.|++++..+.+++ ++.|++.|+.+++.+.++++.+.|
T Consensus 212 ~~~~~~----~~~~~~~~~~~~~~l~~l-------~~~~~~~~~~~a~~~~~~~~~~~~ 259 (263)
T 1yqg_A 212 EDFEKL----QKNVTSKGGTTHEAVEAF-------RRHRVAEAISEGVCACVRRSQEME 259 (263)
T ss_dssp CCHHHH----HHHTCCTTSHHHHHHHHH-------HHTTHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHH----HHhcCCCChhHHHHHHHH-------HHCCHHHHHHHHHHHHHHHHHHHH
Confidence 112111 234677888777666555 779999999999999999998875
No 48
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=99.90 E-value=2.9e-24 Score=192.24 Aligned_cols=188 Identities=15% Similarity=0.207 Sum_probs=139.8
Q ss_pred CCCCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhH--------------HHHHHh-CCCCCCCCHHHHhhcCCEEE
Q 018506 42 SCQFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNV--------------MKMFSD-MGVPTKETPFEVAEASDVVI 106 (355)
Q Consensus 42 ~~~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~--------------~~~l~~-~g~~~~~s~~e~~~~aDiVi 106 (355)
....|||+|||+|+||.+||.+|+++||+|++|||++++ .+.+.+ .+...+.++.++++++|+||
T Consensus 16 ~~~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aDvVi 95 (245)
T 3dtt_A 16 YFQGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVHLAAFADVAAGAELVV 95 (245)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCEEEEHHHHHHHCSEEE
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCceeccCHHHHHhcCCEEE
Confidence 456799999999999999999999999999999999997 555554 35566778999999999999
Q ss_pred EeCCCchHHHHHhcCC-CccccCCCCCCCeEEEEcCC-----------CCHHHHHHHHHHHhhchhhhccCCCCCceEEe
Q 018506 107 TMLPSSSHVLDVYNGP-NGLLQGGNSVRPQLLIDSST-----------IDPQTSRNISAAVSNCILKEKKDSWENPVMLD 174 (355)
Q Consensus 107 ~~v~~~~~~~~vl~~~-~~~l~~~~~~~~~ivi~~st-----------~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~ 174 (355)
+|+|.. .+.+++..+ .+.+ ++++|||+++ ..|.+...+.+.+.+. +.... ...++.+++
T Consensus 96 lavp~~-~~~~~~~~i~~~~l------~g~ivi~~s~~~~~~~G~~~t~~~~~~~~~~~~l~~~-l~~~~-vv~~~~~~~ 166 (245)
T 3dtt_A 96 NATEGA-SSIAALTAAGAENL------AGKILVDIANPLDFSHGMPPTLNPVNTDSLGEQIQRT-FPEAK-VVKTLNTMN 166 (245)
T ss_dssp ECSCGG-GHHHHHHHHCHHHH------TTSEEEECCCCEECTTCSSCEESSCSSCCHHHHHHHH-STTSE-EEECSTTSC
T ss_pred EccCcH-HHHHHHHHhhhhhc------CCCEEEECCCCCCCcCCccccccCCCCccHHHHHHHH-CCCCe-EEEeecccC
Confidence 999976 445555543 2222 4579999993 3443333333333221 00000 001367888
Q ss_pred CCCCCChHHHhcCceEEEecC-CHHHHHHHHHHHHHcCCC-eEEeCCcchHHHHHHHHHHHHHHHH
Q 018506 175 APVSGGVLAAEAGTLTFMVGG-SEDAYQAAKPLFLSMGKN-TIYCGGAGNGAAAKICNNLTMAVSM 238 (355)
Q Consensus 175 ~pv~g~~~~~~~g~~~~~~gg-~~~~~~~v~~ll~~~g~~-~~~~g~~g~a~~~Kl~~n~~~~~~~ 238 (355)
+|+++++..+..+++.++++| |+++++.++++|+.+|.+ ++++|++|.+..+|+++|++..++.
T Consensus 167 a~v~~~~~~a~~g~~~~~v~g~d~~~~~~v~~ll~~~g~~~~~~~G~~g~a~~~k~~~~~~~~l~~ 232 (245)
T 3dtt_A 167 ASLMVDPGRAAGGDHSVFVSGNDAAAKAEVATLLKSLGHQDVIDLGDITTARGAEMLLPVWIRLWG 232 (245)
T ss_dssp HHHHHCGGGTGGGCCCEEEECSCHHHHHHHHHHHHHTTCCCEEEEESGGGHHHHHTTHHHHHHHHH
T ss_pred HHHhcCccccCCCCeeEEEECCCHHHHHHHHHHHHHcCCCceeccCcHHHHHHhhhhHHHHHHHHH
Confidence 999988887777887777755 689999999999999974 6899999999999999999887763
No 49
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=99.89 E-value=5.3e-23 Score=195.40 Aligned_cols=281 Identities=12% Similarity=0.073 Sum_probs=189.3
Q ss_pred CceEEEEcccHHhHHHHHHHHHCC-------CcEEEEeCChh-----HHHHHHhC--------------CCCCCCCHHHH
Q 018506 45 FESVGFIGLGNMGFRMASNLMKAG-------YKMAVHDVNCN-----VMKMFSDM--------------GVPTKETPFEV 98 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~~G-------~~V~v~dr~~~-----~~~~l~~~--------------g~~~~~s~~e~ 98 (355)
+|||+|||+|+||++||..|+++| |+|++|+|+++ +++.+++. ++..++++.++
T Consensus 21 ~~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ea 100 (375)
T 1yj8_A 21 PLKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVAHSDLASV 100 (375)
T ss_dssp CBCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEEESSTHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEEECCHHHH
Confidence 579999999999999999999999 99999999998 88887652 23445678888
Q ss_pred hhcCCEEEEeCCCchHHHHHhcCCCc----cccCCCCCCCeEEEEcCCCC-H--HHHHHHHHHHhhchhhhccCCCCCce
Q 018506 99 AEASDVVITMLPSSSHVLDVYNGPNG----LLQGGNSVRPQLLIDSSTID-P--QTSRNISAAVSNCILKEKKDSWENPV 171 (355)
Q Consensus 99 ~~~aDiVi~~v~~~~~~~~vl~~~~~----~l~~~~~~~~~ivi~~st~~-~--~~~~~l~~~~~~~~~~~~~g~~~~~~ 171 (355)
++++|+||+|||+ +++++++..+.+ .+. +++++|+++++. + ...+.+.+.+.+. .+ ....
T Consensus 101 ~~~aDvVilav~~-~~~~~vl~~i~~~~~~~l~-----~~~ivvs~~~Gi~~~~~~~~~l~~~l~~~-----~~--~~~~ 167 (375)
T 1yj8_A 101 INDADLLIFIVPC-QYLESVLASIKESESIKIA-----SHAKAISLTKGFIVKKNQMKLCSNYISDF-----LN--IPCS 167 (375)
T ss_dssp HTTCSEEEECCCH-HHHHHHHHHHTC---CCCC-----TTCEEEECCCSCEEETTEEECHHHHHHHH-----SS--SCEE
T ss_pred HcCCCEEEEcCCH-HHHHHHHHHHhhhhhccCC-----CCCEEEEeCCccccCCccccCHHHHHHHH-----cC--CCEE
Confidence 8999999999995 689999876655 442 457889988653 4 1223344444321 11 1134
Q ss_pred EEeCCCCCChHHHhcCceEEEecCCHHHHHHHHHHHHHcCCCeEEeCCcchHHHHHHH-----------------HHHHH
Q 018506 172 MLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKIC-----------------NNLTM 234 (355)
Q Consensus 172 ~~~~pv~g~~~~~~~g~~~~~~gg~~~~~~~v~~ll~~~g~~~~~~g~~g~a~~~Kl~-----------------~n~~~ 234 (355)
+...|..............++.+++++..+.++++|+..+.++++.+++....|.|++ +|...
T Consensus 168 v~~gp~~a~~v~~g~~~~~~~~~~~~~~~~~v~~ll~~~g~~~~~~~di~~~~~~k~l~N~~~~~~g~~~~~~~~~n~~~ 247 (375)
T 1yj8_A 168 ALSGANIAMDVAMENFSEATIGGNDKDSLVIWQRVFDLPYFKINCVNETIEVEICGALKNIITLACGFCDGLNLPTNSKS 247 (375)
T ss_dssp EEECSCCHHHHHTTCCEEEEEECSCHHHHHHHHHHHCBTTEEEEEESCSHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred EEeCCchHHHHHhCCCeEEEEecCCHHHHHHHHHHhCCCCeEEEEeCCcHHHHHHHHHHHHHHHHHHHHhhccCChhHHH
Confidence 5666654322222233345556678899999999999999888888886555565554 55567
Q ss_pred HHHHHHHHHHHHHHHHc--CCCHHHHHHH------HHhcCCCcccccCCCCCCCccc-CCCCCCCCCC------Ccchhh
Q 018506 235 AVSMLGVSEALTLGQSL--GISASTLTKI------LNSSSARCWSSDSYNPVPGVME-GVPASRNYGG------GFASKL 299 (355)
Q Consensus 235 ~~~~~~~~Ea~~la~~~--Gi~~~~~~~~------~~~~~~~s~~~~~~~~~~~~~~-~~~~~~~~~~------~~~~~~ 299 (355)
..+..++.|+..++++. |++++++.++ +..... + ..+.....+.. +. ...+.. .+....
T Consensus 248 a~~~~~~~E~~~la~a~G~G~~~~~~~~~~g~~dl~~t~~~-~---~~~~~~~~~~~~g~--~~~~~d~~~~~~~g~~~E 321 (375)
T 1yj8_A 248 AIIRNGINEMILFGKVFFQKFNENILLESCGFADIITSFLA-G---RNAKCSAEFIKSTP--KKTWEELENEILKGQKLQ 321 (375)
T ss_dssp HHHHHHHHHHHHHHHHHSSCCCGGGGGSTTTHHHHHHHHSS-S---SHHHHHHHHHHHTT--SSCHHHHHHHHHTTCCCH
T ss_pred HHHHHHHHHHHHHHHHhccCCCcchhhccccccceeEeeeC-C---ccHHHHHHHHhcCC--CCCHHHHHHhhcCCcEee
Confidence 77889999999999999 6998776432 222111 0 00000000000 00 000100 033456
Q ss_pred HHHHHHHHHHHHHHhCC--CChHHHHHHHHHHHHHHCCCCCCcHHHHHHHHhcC
Q 018506 300 MAKDLNLALASAKEVGV--DCPLTSQAQDIYAKLCENGHDSKDFSCVFQHYYGG 351 (355)
Q Consensus 300 ~~kd~~~~~~~a~~~gv--~~pi~~~~~~~~~~~~~~g~g~~d~~~~~~~~~~~ 351 (355)
..+|++.++++++++|+ ++|+++.++++++ ++.+...+++.+..+
T Consensus 322 ~~~~~~~v~~~a~~~gv~~~~P~~~~v~~~~~-------~~~~~~~~~~~l~~~ 368 (375)
T 1yj8_A 322 GTVTLKYVYHMIKEKNMTNEFPLFTVLHKISF-------ENEDPSSLLKTFMNN 368 (375)
T ss_dssp HHHHHHHHHHHHHHTTCGGGCHHHHHHHHHHH-------SCCCTTHHHHHHSSC
T ss_pred HHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHh-------CCCCHHHHHHHHHcC
Confidence 78999999999999999 9999999999886 344555666655544
No 50
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=99.89 E-value=3.7e-23 Score=192.43 Aligned_cols=263 Identities=17% Similarity=0.175 Sum_probs=174.8
Q ss_pred CCCCceEEEEcccHHhHHHHHHHHHCC----CcEEEEeCChh--HHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHH
Q 018506 42 SCQFESVGFIGLGNMGFRMASNLMKAG----YKMAVHDVNCN--VMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHV 115 (355)
Q Consensus 42 ~~~~mkIgiIG~G~mG~~ia~~L~~~G----~~V~v~dr~~~--~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~ 115 (355)
.+.+|||+|||+|+||.+|+.+|.++| |+|++|||+++ +++.+.+.|+..++++.++++++|+||+||| ++++
T Consensus 19 ~~~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~~~G~~~~~~~~e~~~~aDvVilav~-~~~~ 97 (322)
T 2izz_A 19 YFQSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRKMGVKLTPHNKETVQHSDVLFLAVK-PHII 97 (322)
T ss_dssp ---CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHHHHHTCEEESCHHHHHHHCSEEEECSC-GGGH
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCccHHHHHHHHHcCCEEeCChHHHhccCCEEEEEeC-HHHH
Confidence 355689999999999999999999999 89999999986 8888887788888889999999999999999 5789
Q ss_pred HHHhcCCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCceEEe-CCCCCChHHHhcCceEEEec
Q 018506 116 LDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLD-APVSGGVLAAEAGTLTFMVG 194 (355)
Q Consensus 116 ~~vl~~~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~-~pv~g~~~~~~~g~~~~~~g 194 (355)
++++..+.+.+. ++++||+++++.+. ..+.+.+.+. .+ ...++. .|. .+.....+. +++++
T Consensus 98 ~~vl~~l~~~l~-----~~~ivvs~s~gi~~--~~l~~~l~~~-----~~---~~~vv~~~p~--~p~~~~~g~-~v~~~ 159 (322)
T 2izz_A 98 PFILDEIGADIE-----DRHIVVSCAAGVTI--SSIEKKLSAF-----RP---APRVIRCMTN--TPVVVREGA-TVYAT 159 (322)
T ss_dssp HHHHHHHGGGCC-----TTCEEEECCTTCCH--HHHHHHHHTT-----SS---CCEEEEEECC--GGGGGTCEE-EEEEE
T ss_pred HHHHHHHHhhcC-----CCCEEEEeCCCCCH--HHHHHHHhhc-----CC---CCeEEEEeCC--cHHHHcCCe-EEEEe
Confidence 998876544442 45799999876543 3455555421 00 122222 221 222223343 66666
Q ss_pred CC---HHHHHHHHHHHHHcCCCeEEeCCcchHHHHHHHH--HHHHHHHHHHHHHHHHH-HHHcCCCHHHHHHHHHhcCCC
Q 018506 195 GS---EDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICN--NLTMAVSMLGVSEALTL-GQSLGISASTLTKILNSSSAR 268 (355)
Q Consensus 195 g~---~~~~~~v~~ll~~~g~~~~~~g~~g~a~~~Kl~~--n~~~~~~~~~~~Ea~~l-a~~~Gi~~~~~~~~~~~~~~~ 268 (355)
++ ++.++.++++|+.+|..+++ .+........+.. |.+.+. +.|++.. +.+.|++++.+.+++..+...
T Consensus 160 g~~~~~~~~~~v~~ll~~~G~~~~~-~e~~~~~~~a~~g~gpa~~~~----~~eala~a~~~~Gl~~~~a~~l~~~~~~g 234 (322)
T 2izz_A 160 GTHAQVEDGRLMEQLLSSVGFCTEV-EEDLIDAVTGLSGSGPAYAFT----ALDALADGGVKMGLPRRLAVRLGAQALLG 234 (322)
T ss_dssp CTTCCHHHHHHHHHHHHTTEEEEEC-CGGGHHHHHHHTTTHHHHHHH----HHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHhCCCEEEe-CHHHHHHHHHHhcCHHHHHHH----HHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 66 78999999999999986544 3322233333321 222223 4455544 789999999999999876544
Q ss_pred ccccc-CCCCCCCcccCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHCCCCCC
Q 018506 269 CWSSD-SYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENGHDSK 339 (355)
Q Consensus 269 s~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~gv~~pi~~~~~~~~~~~~~~g~g~~ 339 (355)
++... .....|..+. +..++|++++. ..++.+++.|++.++.+++.+.++++.+.|.++.
T Consensus 235 ~~~~~~~~~~~p~~l~----~~v~sp~g~t~-------~~l~~l~~~g~~~~~~~av~~~~~ra~e~~~~~~ 295 (322)
T 2izz_A 235 AAKMLLHSEQHPGQLK----DNVSSPGGATI-------HALHVLESGGFRSLLINAVEASCIRTRELQSMAD 295 (322)
T ss_dssp HHHHHHHCSSCHHHHH----HHHCCTTSHHH-------HHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHhcCCCHHHHH----HhCCCCCcHHH-------HHHHHHHHCCHHHHHHHHHHHHHHHHHHHhhccc
Confidence 33111 0011122221 12234554433 4566788899999999999999999998876543
No 51
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=99.89 E-value=1.1e-22 Score=191.62 Aligned_cols=282 Identities=12% Similarity=0.073 Sum_probs=187.4
Q ss_pred CCCceEEEEcccHHhHHHHHHHHHCC-------CcEEEEeCChh-----HHHHHHhCC--------------CCCCCCHH
Q 018506 43 CQFESVGFIGLGNMGFRMASNLMKAG-------YKMAVHDVNCN-----VMKMFSDMG--------------VPTKETPF 96 (355)
Q Consensus 43 ~~~mkIgiIG~G~mG~~ia~~L~~~G-------~~V~v~dr~~~-----~~~~l~~~g--------------~~~~~s~~ 96 (355)
|.+|||+|||+|+||+++|..|+++| |+|++|+|+++ +.+.+.+.+ +..++++.
T Consensus 6 m~~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (354)
T 1x0v_A 6 MASKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVPDVV 85 (354)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEESSHH
T ss_pred cCCCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEEcCHH
Confidence 45689999999999999999999999 99999999998 888776421 23346788
Q ss_pred HHhhcCCEEEEeCCCchHHHHHhcCCCccccCCCCCCCeEEEEcCCCCH---HHHHHHHHHHhhchhhhccCCCCCceEE
Q 018506 97 EVAEASDVVITMLPSSSHVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDP---QTSRNISAAVSNCILKEKKDSWENPVML 173 (355)
Q Consensus 97 e~~~~aDiVi~~v~~~~~~~~vl~~~~~~l~~~~~~~~~ivi~~st~~~---~~~~~l~~~~~~~~~~~~~g~~~~~~~~ 173 (355)
++++++|+||+|+|. ..+++++..+.+.+. ++++|++++++.. ...+.+.+.+.+. + + ....+.
T Consensus 86 ~~~~~aD~Vilav~~-~~~~~v~~~i~~~l~-----~~~ivv~~~~Gi~~~~~~~~~l~~~l~~~-~----~--~~~~v~ 152 (354)
T 1x0v_A 86 QAAEDADILIFVVPH-QFIGKICDQLKGHLK-----ANATGISLIKGVDEGPNGLKLISEVIGER-L----G--IPMSVL 152 (354)
T ss_dssp HHHTTCSEEEECCCG-GGHHHHHHHHTTCSC-----TTCEEEECCCCBCSSSSSCCBHHHHHHHH-H----T--CCEEEE
T ss_pred HHHcCCCEEEEeCCH-HHHHHHHHHHHhhCC-----CCCEEEEECCccCCCCCccccHHHHHHHH-c----C--CCEEEE
Confidence 888999999999996 588888876655543 4578899887542 2223333333321 0 1 013455
Q ss_pred eCCCCCChHHHhcC--ceEEEecCCHHHHHHHHHHHHHcCCCeEEeCCcchHHHHHHH-----------------HHHHH
Q 018506 174 DAPVSGGVLAAEAG--TLTFMVGGSEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKIC-----------------NNLTM 234 (355)
Q Consensus 174 ~~pv~g~~~~~~~g--~~~~~~gg~~~~~~~v~~ll~~~g~~~~~~g~~g~a~~~Kl~-----------------~n~~~ 234 (355)
..|.+. .....+ ...++.+++++..+.++++|+..+.++++.+++....|.|++ +|...
T Consensus 153 ~gp~~a--~~v~~g~~~~~~~~~~~~~~~~~v~~ll~~~g~~~~~~~di~~~~~~k~~~N~~~~~~g~~~~~~~~~n~~~ 230 (354)
T 1x0v_A 153 MGANIA--SEVADEKFCETTIGCKDPAQGQLLKELMQTPNFRITVVQEVDTVEICGALKNVVAVGAGFCDGLGFGDNTKA 230 (354)
T ss_dssp ECSCCH--HHHHTTCCEEEEEECSSHHHHHHHHHHHCBTTEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred ECCCcH--HHHHhcCCceEEEEECCHHHHHHHHHHhCCCCEEEEEcCCchHhHHHHHHHHHHHHHHHHHHHccCCccHHH
Confidence 566532 222334 334555678889999999999999888888887666777666 56666
Q ss_pred HHHHHHHHHHHHHHHHcCC---CHHHHHH------HHHhcCCCcccccCCCCCCCccc-CCCCCCCCC---CCcchhhHH
Q 018506 235 AVSMLGVSEALTLGQSLGI---SASTLTK------ILNSSSARCWSSDSYNPVPGVME-GVPASRNYG---GGFASKLMA 301 (355)
Q Consensus 235 ~~~~~~~~Ea~~la~~~Gi---~~~~~~~------~~~~~~~~s~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~ 301 (355)
.....++.|+..++++.|+ +++++.+ ++..... +.. +...+.+.. ++. ..+.. ..+......
T Consensus 231 ~~~~~~~~E~~~la~a~G~~~~~~~~~~~~~g~~d~~~~~~~-~~~---~~~~~~~~~~~~~-~~~~~~~~~~g~~~E~~ 305 (354)
T 1x0v_A 231 AVIRLGLMEMIAFAKLFCSGPVSSATFLESCGVADLITTCYG-GRN---RKVAEAFARTGKS-IEQLEKELLNGQKLQGP 305 (354)
T ss_dssp HHHHHHHHHHHHHHHHHSSSCCCGGGGGSTTTHHHHHHHHHH-CHH---HHHHHHHHHHCCC-HHHHHHHHSTTCCCHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcccccccchHHHHHHhhcc-ccc---HHHHHHHHhcCCC-HHHHHHhhcCCcEeehH
Confidence 7788999999999999999 8876532 2221110 000 000000000 000 00000 012345678
Q ss_pred HHHHHHHHHHHHhCC--CChHHHHHHHHHHHHHHCCCCCCcHHHHHHHHhcC
Q 018506 302 KDLNLALASAKEVGV--DCPLTSQAQDIYAKLCENGHDSKDFSCVFQHYYGG 351 (355)
Q Consensus 302 kd~~~~~~~a~~~gv--~~pi~~~~~~~~~~~~~~g~g~~d~~~~~~~~~~~ 351 (355)
+|++.++++++++|+ ++|+++.++++++. +.+...+++.+..+
T Consensus 306 ~~~g~v~~~a~~~gv~~~~P~~~~v~~~~~~-------~~~~~~~~~~l~~~ 350 (354)
T 1x0v_A 306 ETARELYSILQHKGLVDKFPLFMAVYKVCYE-------GQPVGEFIHCLQNH 350 (354)
T ss_dssp HHHHHHHHHHHHHTCGGGSHHHHHHHHHHHS-------CCCGGGTHHHHHTC
T ss_pred HHHHHHHHHHHHhCCCCCCCHHHHHHHHHhC-------CCCHHHHHHHHHcC
Confidence 999999999999999 99999999998862 22445555555443
No 52
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=99.89 E-value=6.1e-23 Score=189.91 Aligned_cols=267 Identities=12% Similarity=0.100 Sum_probs=173.4
Q ss_pred CCCCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHh-----------CC--------------CCCCCCHH
Q 018506 42 SCQFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSD-----------MG--------------VPTKETPF 96 (355)
Q Consensus 42 ~~~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~-----------~g--------------~~~~~s~~ 96 (355)
.+.++||+|||+|.||.+||..|+++||+|++||+++++++.+.+ .| +..++++.
T Consensus 3 ~~~~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~~~~~ 82 (319)
T 2dpo_A 3 SPAAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLA 82 (319)
T ss_dssp ----CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHH
T ss_pred CCCCceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEeCCHH
Confidence 356689999999999999999999999999999999998877642 23 24568899
Q ss_pred HHhhcCCEEEEeCCCchHHH-HHhcCCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCceEEeC
Q 018506 97 EVAEASDVVITMLPSSSHVL-DVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDA 175 (355)
Q Consensus 97 e~~~~aDiVi~~v~~~~~~~-~vl~~~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~ 175 (355)
+++++||+||+|+|++.+++ .++.++.+.+ +++++|++.+++.+. ..+.+.+.. ...+.+.||+++
T Consensus 83 eav~~aDlVieavpe~~~~k~~v~~~l~~~~-----~~~~Ii~s~tS~i~~--~~la~~~~~------~~r~ig~Hp~~P 149 (319)
T 2dpo_A 83 EAVEGVVHIQECVPENLDLKRKIFAQLDSIV-----DDRVVLSSSSSCLLP--SKLFTGLAH------VKQCIVAHPVNP 149 (319)
T ss_dssp HHTTTEEEEEECCCSCHHHHHHHHHHHHTTC-----CSSSEEEECCSSCCH--HHHHTTCTT------GGGEEEEEECSS
T ss_pred HHHhcCCEEEEeccCCHHHHHHHHHHHHhhC-----CCCeEEEEeCCChHH--HHHHHhcCC------CCCeEEeecCCc
Confidence 99999999999999876554 4554433333 245677655444332 234443321 011123678876
Q ss_pred CCCCChHHHhcCceEEEec--CCHHHHHHHHHHHHHcCCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Q 018506 176 PVSGGVLAAEAGTLTFMVG--GSEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGI 253 (355)
Q Consensus 176 pv~g~~~~~~~g~~~~~~g--g~~~~~~~v~~ll~~~g~~~~~~g~~g~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gi 253 (355)
|..+ +...++.| +++++++.++++++.+|+.+++++..+.+. ++||++. ++++|++.++++.++
T Consensus 150 ~~~~-------~lveiv~g~~t~~e~~~~~~~l~~~lGk~~v~v~~~~~Gf---i~Nrll~----a~~~EA~~l~~~g~~ 215 (319)
T 2dpo_A 150 PYYI-------PLVELVPHPETSPATVDRTHALMRKIGQSPVRVLKEIDGF---VLNRLQY----AIISEAWRLVEEGIV 215 (319)
T ss_dssp TTTC-------CEEEEEECTTCCHHHHHHHHHHHHHTTCEEEECSSCCTTT---THHHHHH----HHHHHHHHHHHTTSS
T ss_pred hhhc-------ceEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEECCCcCCc---hHHHHHH----HHHHHHHHHHHhCCC
Confidence 6322 22345555 589999999999999999999997545554 4455544 357899999999999
Q ss_pred CHHHHHHHHHhcCCCcccccCCCCCCCcccCCCCCCCCCCCcchhhHHHHHH-HHHHHHHHhCCCChHHHHHHHHHHHHH
Q 018506 254 SASTLTKILNSSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLN-LALASAKEVGVDCPLTSQAQDIYAKLC 332 (355)
Q Consensus 254 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kd~~-~~~~~a~~~gv~~pi~~~~~~~~~~~~ 332 (355)
+++++.+++..+.+.+|.. ..|. . ..|+.. .++..+...++ ...+..+++|-..++...+.+.+....
T Consensus 216 ~~~~id~a~~~g~g~~~a~--~GP~--~------~~dl~g-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (319)
T 2dpo_A 216 SPSDLDLVMSDGLGMRYAF--IGPL--E------TMHLNA-EGMLSYSDRYSEGMKRVLKSFGSIPEFSGATVEKVNQAM 284 (319)
T ss_dssp CHHHHHHHHHTTHHHHHTT--SCHH--H------HHHHTT-TSHHHHHHHHHHHHHHHHHTCCCCCCCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHhCCCCCccc--cCHH--H------HHHhcC-chHHHHHHHHhHHHHHHHHHcCCCCCCCHHHHHHHHHHH
Confidence 9999999999887766532 1111 0 012222 22334444343 345666778855555555565555555
Q ss_pred HCCCC--CCcHHHHHH
Q 018506 333 ENGHD--SKDFSCVFQ 346 (355)
Q Consensus 333 ~~g~g--~~d~~~~~~ 346 (355)
+.-.+ ..++.++.+
T Consensus 285 ~~~~~~~~~~~~~~~~ 300 (319)
T 2dpo_A 285 CKKVPADPEHLAARRE 300 (319)
T ss_dssp HHHSCSSHHHHHHHHH
T ss_pred HHhcCCcccCHHHHHH
Confidence 44444 345554443
No 53
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=99.86 E-value=1.4e-21 Score=178.70 Aligned_cols=201 Identities=14% Similarity=0.174 Sum_probs=157.8
Q ss_pred CceEEEEcc-cHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHHHHhcCCC
Q 018506 45 FESVGFIGL-GNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNGPN 123 (355)
Q Consensus 45 ~mkIgiIG~-G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl~~~~ 123 (355)
||||+|||+ |+||..++..|.++||+|++|||++++++.+.+.|+... ++.++++++|+||+|+|.. .+++++..+.
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~-~~~~~~~~aDvVi~av~~~-~~~~v~~~l~ 88 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGMGIPLT-DGDGWIDEADVVVLALPDN-IIEKVAEDIV 88 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHTTCCCC-CSSGGGGTCSEEEECSCHH-HHHHHHHHHG
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhcCCCcC-CHHHHhcCCCEEEEcCCch-HHHHHHHHHH
Confidence 579999999 999999999999999999999999999998887776554 6778889999999999975 6888887654
Q ss_pred ccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCceEE-eCCCCCCh------HHHhcCc-------e
Q 018506 124 GLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVML-DAPVSGGV------LAAEAGT-------L 189 (355)
Q Consensus 124 ~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~-~~pv~g~~------~~~~~g~-------~ 189 (355)
+.+. ++++|+++|+..+. ..+.+ + . .+..|+ .+|++++. .....+. .
T Consensus 89 ~~l~-----~~~ivv~~s~~~~~--~~l~~-~-------~----~~~~~v~~~P~~~~~~~~~~~~~~~~g~l~~~~~~~ 149 (286)
T 3c24_A 89 PRVR-----PGTIVLILDAAAPY--AGVMP-E-------R----ADITYFIGHPCHPPLFNDETDPAARTDYHGGIAKQA 149 (286)
T ss_dssp GGSC-----TTCEEEESCSHHHH--HTCSC-C-------C----TTSEEEEEEECCSCSSCCCCSHHHHTCSSSSSSCEE
T ss_pred HhCC-----CCCEEEECCCCchh--HHHHh-h-------h----CCCeEEecCCCCccccccccchhhccCcccccccce
Confidence 4432 46799998776543 22211 1 0 125677 88888776 5566663 2
Q ss_pred E--EEecCCHHHHHHHHHHHHHcCC---CeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCCHHHHHHHHH
Q 018506 190 T--FMVGGSEDAYQAAKPLFLSMGK---NTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTL-GQSLGISASTLTKILN 263 (355)
Q Consensus 190 ~--~~~gg~~~~~~~v~~ll~~~g~---~~~~~g~~g~a~~~Kl~~n~~~~~~~~~~~Ea~~l-a~~~Gi~~~~~~~~~~ 263 (355)
. +..+++++.++.++++|+.+|. +++++++.+.+.+.|.+.|.....++..+.|++.. +.+.|++++++.+++.
T Consensus 150 ~i~~~~~~~~~~~~~v~~l~~~~G~~~~~~~~v~~~~~~~~~~a~~n~~~~~~~~~~~eal~~~~~~~Gl~~~~~~~~~~ 229 (286)
T 3c24_A 150 IVCALMQGPEEHYAIGADICETMWSPVTRTHRVTTEQLAILEPGLSEMVAMPFVETMVHAVDECADRYGIDRQAALDFMI 229 (286)
T ss_dssp EEEEEEESCTHHHHHHHHHHHHHTCSEEEEEECCHHHHHHHTTHHHHTTHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
T ss_pred eeeeccCCCHHHHHHHHHHHHHhcCCcceEEEeChhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 2 3346788999999999999998 78999887777777999998777888889998877 5556999999999988
Q ss_pred hcC
Q 018506 264 SSS 266 (355)
Q Consensus 264 ~~~ 266 (355)
.+.
T Consensus 230 ~~~ 232 (286)
T 3c24_A 230 GHL 232 (286)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 54
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=99.86 E-value=7.3e-21 Score=177.92 Aligned_cols=261 Identities=15% Similarity=0.168 Sum_probs=172.3
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCC-------------CCCCHHHHhhcCCEEEEeCC
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVP-------------TKETPFEVAEASDVVITMLP 110 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~-------------~~~s~~e~~~~aDiVi~~v~ 110 (355)
++|||+|||+|.||+++|..|+++|++|++|+|+ ++.+.+++.|.. .++++++ ++.+|+||+|+|
T Consensus 2 ~~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~Vilavk 79 (335)
T 3ghy_A 2 SLTRICIVGAGAVGGYLGARLALAGEAINVLARG-ATLQALQTAGLRLTEDGATHTLPVRATHDAAA-LGEQDVVIVAVK 79 (335)
T ss_dssp CCCCEEEESCCHHHHHHHHHHHHTTCCEEEECCH-HHHHHHHHTCEEEEETTEEEEECCEEESCHHH-HCCCSEEEECCC
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCEEEEEECh-HHHHHHHHCCCEEecCCCeEEEeeeEECCHHH-cCCCCEEEEeCC
Confidence 4689999999999999999999999999999995 677888776643 2356665 579999999999
Q ss_pred CchHHHHHhcCCCccccCCCCCCCeEEEEcCCCCH------------------HHHHHHHHHHhhchhhhccCCCCCceE
Q 018506 111 SSSHVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDP------------------QTSRNISAAVSNCILKEKKDSWENPVM 172 (355)
Q Consensus 111 ~~~~~~~vl~~~~~~l~~~~~~~~~ivi~~st~~~------------------~~~~~l~~~~~~~~~~~~~g~~~~~~~ 172 (355)
. .++++++..+.+.+. ++++|+.++++.+ ...+.+.+.++...+. .+.......
T Consensus 80 ~-~~~~~~~~~l~~~l~-----~~~~iv~~~nGi~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~v~--~gv~~~~a~ 151 (335)
T 3ghy_A 80 A-PALESVAAGIAPLIG-----PGTCVVVAMNGVPWWFFDRPGPLQGQRLQAVDPHGRIAQAIPTRHVL--GCVVHLTCA 151 (335)
T ss_dssp H-HHHHHHHGGGSSSCC-----TTCEEEECCSSSCTTTTCSSSTTTTCCCTTTCTTSHHHHHSCGGGEE--EEEECCCEE
T ss_pred c-hhHHHHHHHHHhhCC-----CCCEEEEECCCCccccccccccccccccccCCcHHHHHHhcCcccEE--EEEEEEEEE
Confidence 7 588999988766653 4568888877732 1223455555432110 000000011
Q ss_pred EeCCCCCChHHHhcCceEEEec----CCHHHHHHHHHHHHHcCCCeEEeCCcchHHHHHHHHHHH---------------
Q 018506 173 LDAPVSGGVLAAEAGTLTFMVG----GSEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLT--------------- 233 (355)
Q Consensus 173 ~~~pv~g~~~~~~~g~~~~~~g----g~~~~~~~v~~ll~~~g~~~~~~g~~g~a~~~Kl~~n~~--------------- 233 (355)
...|-. ......+ .+.+| .+.+..+.+.++|+..+.+++...++-...|.|++.|..
T Consensus 152 ~~~pg~--v~~~~~g--~~~iG~~~~~~~~~~~~l~~~l~~~g~~~~~~~di~~~~w~Kl~~na~~N~l~al~~~~~g~~ 227 (335)
T 3ghy_A 152 TVSPGH--IRHGNGR--RLILGEPAGGASPRLASIAALFGRAGLQAECSEAIQRDIWFKLWGNMTMNPVSVLTGATCDRI 227 (335)
T ss_dssp ESSTTE--EEECSCC--EEEEECTTCSCCHHHHHHHHHHHHTTCEEEECSCHHHHHHHHHHTTTTHHHHHHHHCCCHHHH
T ss_pred EcCCcE--EEECCCC--eEEEecCCCCcCHHHHHHHHHHHhCCCCcEeCchHHHHHHHHHHHHhhhhHHHHHhCCChHHH
Confidence 222211 1111112 23343 345678899999999998888888888999999876643
Q ss_pred ------HHHHHHHHHHHHHHHHHcCCCH----HHHHHHHHhcCCCcccccCCCCCCCcccCC-CCCCCCCCCcchhhHHH
Q 018506 234 ------MAVSMLGVSEALTLGQSLGISA----STLTKILNSSSARCWSSDSYNPVPGVMEGV-PASRNYGGGFASKLMAK 302 (355)
Q Consensus 234 ------~~~~~~~~~Ea~~la~~~Gi~~----~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~k 302 (355)
...+..++.|+..++++.|+++ +...+....... ...++..++..|+ +.+-++.
T Consensus 228 ~~~~~~~~l~~~~~~E~~~va~a~G~~~~~~~~~~~~~~~~~~~-----~~sSM~qD~~~gr~~tEid~i---------- 292 (335)
T 3ghy_A 228 LDDPLVSAFCLAVMAEAKAIGARIGCPIEQSGEARSAVTRQLGA-----FKTSMLQDAEAGRGPLEIDAL---------- 292 (335)
T ss_dssp HHSHHHHHHHHHHHHHHHHHHHTTTCCCCSCHHHHHHHHHTTCS-----CCCTTTC-----CCCCCHHHH----------
T ss_pred hcChHHHHHHHHHHHHHHHHHHHcCCCCCccHHHHHHHHhccCC-----CCcHHHHHHHcCCCCchHHHH----------
Confidence 2346778899999999999753 344444433211 1112234444444 4443333
Q ss_pred HHHHHHHHHHHhCCCChHHHHHHHHHHHHHHC
Q 018506 303 DLNLALASAKEVGVDCPLTSQAQDIYAKLCEN 334 (355)
Q Consensus 303 d~~~~~~~a~~~gv~~pi~~~~~~~~~~~~~~ 334 (355)
.+++++.++++|+++|+++.++++++..++.
T Consensus 293 -~G~vv~~a~~~gv~~P~~~~l~~li~~~e~~ 323 (335)
T 3ghy_A 293 -VASVREIGLHVGVPTPQIDTLLGLVRLHAQT 323 (335)
T ss_dssp -THHHHHHHHHHTCCCHHHHHHHHHHHHHHHH
T ss_pred -hhHHHHHHHHhCCCCCHHHHHHHHHHHHHhh
Confidence 4589999999999999999999999887664
No 55
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=99.86 E-value=7.2e-22 Score=178.74 Aligned_cols=202 Identities=13% Similarity=0.129 Sum_probs=152.0
Q ss_pred CceEEEEcccHHhHHHHHHHHHCCCc-EEEEeCChhHHHHHHhC-CCCCCCCHHHHhhcCCEEEEeCCCchHHHHHhcCC
Q 018506 45 FESVGFIGLGNMGFRMASNLMKAGYK-MAVHDVNCNVMKMFSDM-GVPTKETPFEVAEASDVVITMLPSSSHVLDVYNGP 122 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~~G~~-V~v~dr~~~~~~~l~~~-g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl~~~ 122 (355)
+|||+|||+|.||..++..|.+.|++ |.+|||++++++.+.+. ++....++.++++++|+||+|+|++ .+++++..+
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~av~~~-~~~~v~~~l 88 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVSLKDS-AFAELLQGI 88 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEECCCHH-HHHHHHHHH
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEecCHH-HHHHHHHHH
Confidence 58999999999999999999999999 89999999999888764 7777788888888999999999976 667877654
Q ss_pred CccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCceEEeCCCCCChHHHhcCceEEEecCCHHHHHH
Q 018506 123 NGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQA 202 (355)
Q Consensus 123 ~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~pv~g~~~~~~~g~~~~~~gg~~~~~~~ 202 (355)
.+.+ .+++++++++++.+.+. +.+.+.. . +..++..|+++.+.....+...++.+++++.++.
T Consensus 89 ~~~~-----~~~~ivv~~s~~~~~~~--l~~~~~~------~----~~~~~~~~~~g~~~~~~~~~~~~v~~~~~~~~~~ 151 (266)
T 3d1l_A 89 VEGK-----REEALMVHTAGSIPMNV--WEGHVPH------Y----GVFYPMQTFSKQREVDFKEIPFFIEASSTEDAAF 151 (266)
T ss_dssp HTTC-----CTTCEEEECCTTSCGGG--STTTCSS------E----EEEEECCCC---CCCCCTTCCEEEEESSHHHHHH
T ss_pred Hhhc-----CCCcEEEECCCCCchHH--HHHHHHh------c----cCcCCceecCCCchhhcCCCeEEEecCCHHHHHH
Confidence 3333 25679999999887532 3322211 1 1356677776643322233333444789999999
Q ss_pred HHHHHHHcCCCeEEeCCcc---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcCCC
Q 018506 203 AKPLFLSMGKNTIYCGGAG---NGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSAR 268 (355)
Q Consensus 203 v~~ll~~~g~~~~~~g~~g---~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gi~~~~~~~~~~~~~~~ 268 (355)
++++|+.+|.+++++++.+ ...+.|+++|.... +..++|+ ++++.|++++++.+++..+...
T Consensus 152 ~~~l~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~ea--l~~~~Gl~~~~~~~l~~~~~~~ 216 (266)
T 3d1l_A 152 LKAIASTLSNRVYDADSEQRKSLHLAAVFTCNFTNH--MYALAAE--LLKKYNLPFDVMLPLIDETARK 216 (266)
T ss_dssp HHHHHHTTCSCEEECCHHHHHHHHHHHHHHHHHHHH--HHHHHHH--HHHHTTCCGGGGHHHHHHHHHH
T ss_pred HHHHHHhcCCcEEEeCHHHHHHHHHHHHHHHHHHHH--HHHHHHH--HHHHcCCCHHHHHHHHHHHHHH
Confidence 9999999999999999754 56889999998533 3446676 5789999999999998876543
No 56
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=99.85 E-value=2.7e-21 Score=176.24 Aligned_cols=255 Identities=16% Similarity=0.173 Sum_probs=170.0
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCC---cEEEEeCChhHHHHHHhC-CCCCCCCHHHHhhcCCEEEEeCCCchHHHHHh
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGY---KMAVHDVNCNVMKMFSDM-GVPTKETPFEVAEASDVVITMLPSSSHVLDVY 119 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~---~V~v~dr~~~~~~~l~~~-g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl 119 (355)
++|||+|||+|+||.+|+..|.++|+ +|++|||++++++.+.+. |+..+.++.++++++|+||+|+|. +.+++++
T Consensus 2 ~~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav~p-~~~~~vl 80 (280)
T 3tri_A 2 NTSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAVKP-HQIKMVC 80 (280)
T ss_dssp CCSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECSCG-GGHHHHH
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEeCH-HHHHHHH
Confidence 46899999999999999999999999 999999999999999875 888888999999999999999984 6889988
Q ss_pred cCCCcc-ccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCceEEeCCCCCChHHHhcCceEEEec---C
Q 018506 120 NGPNGL-LQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVG---G 195 (355)
Q Consensus 120 ~~~~~~-l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~pv~g~~~~~~~g~~~~~~g---g 195 (355)
.++.+. +. ++++||+.+++.+. ..+.+.++.. .... ..+++.|. ....+. +.++. .
T Consensus 81 ~~l~~~~l~-----~~~iiiS~~agi~~--~~l~~~l~~~---~~vv----r~mPn~p~-----~v~~g~-~~l~~~~~~ 140 (280)
T 3tri_A 81 EELKDILSE-----TKILVISLAVGVTT--PLIEKWLGKA---SRIV----RAMPNTPS-----SVRAGA-TGLFANETV 140 (280)
T ss_dssp HHHHHHHHT-----TTCEEEECCTTCCH--HHHHHHHTCC---SSEE----EEECCGGG-----GGTCEE-EEEECCTTS
T ss_pred HHHHhhccC-----CCeEEEEecCCCCH--HHHHHHcCCC---CeEE----EEecCChH-----HhcCcc-EEEEeCCCC
Confidence 876655 43 34477766555442 4566665420 0000 11222232 222233 43443 3
Q ss_pred CHHHHHHHHHHHHHcCCCeEEeCC-cchHHHHHHH--HHHHHHHHHHHHHHHHHH-HHHcCCCHHHHHHHHHhcCCCccc
Q 018506 196 SEDAYQAAKPLFLSMGKNTIYCGG-AGNGAAAKIC--NNLTMAVSMLGVSEALTL-GQSLGISASTLTKILNSSSARCWS 271 (355)
Q Consensus 196 ~~~~~~~v~~ll~~~g~~~~~~g~-~g~a~~~Kl~--~n~~~~~~~~~~~Ea~~l-a~~~Gi~~~~~~~~~~~~~~~s~~ 271 (355)
+++.++.++++|+.+|+ ++++.+ .......-+. .+.+.+ .+.|++.- +.+.|+++++..+++.++...+..
T Consensus 141 ~~~~~~~v~~l~~~iG~-~~~v~~E~~~d~~talsgsgpa~~~----~~~eal~~a~v~~Gl~~~~a~~l~~~t~~G~a~ 215 (280)
T 3tri_A 141 DKDQKNLAESIMRAVGL-VIWVSSEDQIEKIAALSGSGPAYIF----LIMEALQEAAEQLGLTKETAELLTEQTVLGAAR 215 (280)
T ss_dssp CHHHHHHHHHHHGGGEE-EEECSSHHHHHHHHHHTTSHHHHHH----HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCC-eEEECCHHHhhHHHHHhccHHHHHH----HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence 68899999999999997 455533 1111111111 112222 34455544 789999999999998876533221
Q ss_pred c-cCCCCCCCcccCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHCC
Q 018506 272 S-DSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENG 335 (355)
Q Consensus 272 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~gv~~pi~~~~~~~~~~~~~~g 335 (355)
. ......|..+. +...+||.+.. ..++..++.|++..+.+++.+.++++.+.|
T Consensus 216 ~~~~~~~~p~~l~----~~v~spgGtT~-------~~l~~le~~g~~~~~~~av~aa~~r~~el~ 269 (280)
T 3tri_A 216 MALETEQSVVQLR----QFVTSPGGTTE-------QAIKVLESGNLRELFIKALTAAVNRAKELS 269 (280)
T ss_dssp HHHTCSSCHHHHH----HHHCCTTSHHH-------HHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCHHHHH----HhccCCChHHH-------HHHHHHHHCChHHHHHHHHHHHHHHHHHHH
Confidence 1 00011122221 23455654433 478888999999999999999999998865
No 57
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=99.84 E-value=2.4e-20 Score=173.10 Aligned_cols=258 Identities=12% Similarity=0.149 Sum_probs=173.0
Q ss_pred CCCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCC-------------CCCCCHHHHhhcCCEEEEeC
Q 018506 43 CQFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGV-------------PTKETPFEVAEASDVVITML 109 (355)
Q Consensus 43 ~~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~-------------~~~~s~~e~~~~aDiVi~~v 109 (355)
..+|||+|||+|.||+++|..|+++||+|++| +++++++.+++.|. ..++++++ ++.+|+||+|+
T Consensus 17 ~~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~vilav 94 (318)
T 3hwr_A 17 FQGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARPQHVQAIEATGLRLETQSFDEQVKVSASSDPSA-VQGADLVLFCV 94 (318)
T ss_dssp ---CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCHHHHHHHHHHCEEEECSSCEEEECCEEESCGGG-GTTCSEEEECC
T ss_pred ccCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCHHH-cCCCCEEEEEc
Confidence 35689999999999999999999999999999 88999998887542 22345544 57999999999
Q ss_pred CCchHHHHHhcCCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCceEEeCCCCCChHHHhcCce
Q 018506 110 PSSSHVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTL 189 (355)
Q Consensus 110 ~~~~~~~~vl~~~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~pv~g~~~~~~~g~~ 189 (355)
|.. ++++++..+.+.+. ++++|+.++++.... +.+.+.++ ..+ ..+..........|-. ......+.
T Consensus 95 k~~-~~~~~l~~l~~~l~-----~~~~iv~~~nGi~~~-~~l~~~~~-~~v--l~g~~~~~a~~~gP~~--~~~~~~g~- 161 (318)
T 3hwr_A 95 KST-DTQSAALAMKPALA-----KSALVLSLQNGVENA-DTLRSLLE-QEV--AAAVVYVATEMAGPGH--VRHHGRGE- 161 (318)
T ss_dssp CGG-GHHHHHHHHTTTSC-----TTCEEEEECSSSSHH-HHHHHHCC-SEE--EEEEEEEEEEEEETTE--EEEEEEEE-
T ss_pred ccc-cHHHHHHHHHHhcC-----CCCEEEEeCCCCCcH-HHHHHHcC-CcE--EEEEEEEeEEEcCCeE--EEEcCCce-
Confidence 986 88898887766653 456777777765332 34555543 111 0110000011222311 11112232
Q ss_pred EEEecCCHHHHHHHHHHHHHcCCCeEEeCCcchHHHHHHHHHHHHH---------------------HHHHHHHHHHHHH
Q 018506 190 TFMVGGSEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMA---------------------VSMLGVSEALTLG 248 (355)
Q Consensus 190 ~~~~gg~~~~~~~v~~ll~~~g~~~~~~g~~g~a~~~Kl~~n~~~~---------------------~~~~~~~Ea~~la 248 (355)
+.+|. .+..+.++++|+..+.+++...++-...|.|++.|.... .+..++.|+..++
T Consensus 162 -~~ig~-~~~~~~l~~~l~~~~~~~~~~~Di~~~~w~Kl~~N~~~n~l~al~~~~~g~l~~~~~~~~l~~~~~~E~~~va 239 (318)
T 3hwr_A 162 -LVIEP-TSHGANLAAIFAAAGVPVETSDNVRGALWAKLILNCAYNALSAITQLPYGRLVRGEGVEAVMRDVMEECFAVA 239 (318)
T ss_dssp -EEECC-CTTTHHHHHHHHHTTCCEEECSCHHHHHHHHHHHHHHHHHHHHHHTCCHHHHTTSTTHHHHHHHHHHHHHHHH
T ss_pred -EEEcC-CHHHHHHHHHHHhCCCCcEechHHHHHHHHHHHHHhhhhHHHHHHCCCHHHHhcChhHHHHHHHHHHHHHHHH
Confidence 23444 345678999999999988888888899999999997543 2456788999999
Q ss_pred HHcCCCH-----HHHHHHHHhcCCCcccccCCCCCCCcccCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhCCCChHHHH
Q 018506 249 QSLGISA-----STLTKILNSSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQ 323 (355)
Q Consensus 249 ~~~Gi~~-----~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~gv~~pi~~~ 323 (355)
++.|++. +.+.+.+.... ... .++..++..|++.+-++.. +++++.++++|+++|+++.
T Consensus 240 ~a~G~~l~~~~~~~~~~~~~~~~-~~~----sSM~qD~~~gr~tEid~i~-----------G~vv~~a~~~gv~tP~~~~ 303 (318)
T 3hwr_A 240 RAEGVKLPDDVALAIRRIAETMP-RQS----SSTAQDLARGKRSEIDHLN-----------GLIVRRGDALGIPVPANRV 303 (318)
T ss_dssp HHTTCCCCTTHHHHHHHHHHHST-TCC----CHHHHHHHTTCCCSGGGTH-----------HHHHHHHHHTTCCCHHHHH
T ss_pred HHcCCCCChHHHHHHHHHHHhcC-CCC----cHHHHHHHcCChhHHHHHH-----------HHHHHHHHHhCCCCcHHHH
Confidence 9999852 23334333322 111 1122344556666655543 4799999999999999999
Q ss_pred HHHHHHHHHH
Q 018506 324 AQDIYAKLCE 333 (355)
Q Consensus 324 ~~~~~~~~~~ 333 (355)
++++++..+.
T Consensus 304 l~~ll~~~e~ 313 (318)
T 3hwr_A 304 LHALVRLIED 313 (318)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999887664
No 58
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=99.84 E-value=1.2e-20 Score=170.32 Aligned_cols=248 Identities=14% Similarity=0.126 Sum_probs=165.9
Q ss_pred CCCceEEEEcccHHhHHHHHHHHHCC----CcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHHHH
Q 018506 43 CQFESVGFIGLGNMGFRMASNLMKAG----YKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDV 118 (355)
Q Consensus 43 ~~~mkIgiIG~G~mG~~ia~~L~~~G----~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~v 118 (355)
|.+|||+|||+|+||++++..|.++| |+|++|||++++ .|+..++++.++++++|+||+|+|. .+++++
T Consensus 2 m~~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~~------~g~~~~~~~~~~~~~~D~vi~~v~~-~~~~~v 74 (262)
T 2rcy_A 2 MENIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKKN------TTLNYMSSNEELARHCDIIVCAVKP-DIAGSV 74 (262)
T ss_dssp CSSSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCCS------SSSEECSCHHHHHHHCSEEEECSCT-TTHHHH
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCccc------CceEEeCCHHHHHhcCCEEEEEeCH-HHHHHH
Confidence 34689999999999999999999999 799999999877 4677778899999999999999995 588888
Q ss_pred hcCCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCceE-EeCCCCCChHHHhcCceEEEecC--
Q 018506 119 YNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVM-LDAPVSGGVLAAEAGTLTFMVGG-- 195 (355)
Q Consensus 119 l~~~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~-~~~pv~g~~~~~~~g~~~~~~gg-- 195 (355)
+..+.+.+. ++.++.++++..++ .+.+.++.. .. .+.+ ++.|..+ ..| .++++++
T Consensus 75 ~~~l~~~l~-----~~~vv~~~~gi~~~---~l~~~~~~~----~~----~v~~~p~~p~~~-----~~g-~~~~~~~~~ 132 (262)
T 2rcy_A 75 LNNIKPYLS-----SKLLISICGGLNIG---KLEEMVGSE----NK----IVWVMPNTPCLV-----GEG-SFIYCSNKN 132 (262)
T ss_dssp HHHSGGGCT-----TCEEEECCSSCCHH---HHHHHHCTT----SE----EEEEECCGGGGG-----TCE-EEEEEECTT
T ss_pred HHHHHHhcC-----CCEEEEECCCCCHH---HHHHHhCCC----Cc----EEEECCChHHHH-----cCC-eEEEEeCCC
Confidence 877654441 33466667777765 344444320 00 0223 2344433 245 5666655
Q ss_pred -CHHHHHHHHHHHHHcCCCeEEeCCcchHHHHHHHH--HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcCCCccc-
Q 018506 196 -SEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICN--NLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCWS- 271 (355)
Q Consensus 196 -~~~~~~~v~~ll~~~g~~~~~~g~~g~a~~~Kl~~--n~~~~~~~~~~~Ea~~la~~~Gi~~~~~~~~~~~~~~~s~~- 271 (355)
+++.++.++++|+.+|. ++++++.......++.. |.+...+...+.|+ +.+.|++++.+.+++..+...++.
T Consensus 133 ~~~~~~~~~~~ll~~~G~-~~~~~~~~~~~~~a~~~~~~~~~~~~~~al~~~---~~~~Gl~~~~~~~~~~~~~~~~~~~ 208 (262)
T 2rcy_A 133 VNSTDKKYVNDIFNSCGI-IHEIKEKDMDIATAISGCGPAYVYLFIESLIDA---GVKNGLSRELSKNLVLQTIKGSVEM 208 (262)
T ss_dssp CCHHHHHHHHHHHHTSEE-EEECCGGGHHHHHHHTTSHHHHHHHHHHHHHHH---HHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhCCC-EEEeCHHHccHHHHHHccHHHHHHHHHHHHHHH---HHHcCCCHHHHHHHHHHHHHHHHHH
Confidence 68899999999999997 88888755555555532 44443333333333 789999999998888765432221
Q ss_pred ccCCCCCCCcccCCCCCCCC-CCCcchhhHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHCC
Q 018506 272 SDSYNPVPGVMEGVPASRNY-GGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENG 335 (355)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~kd~~~~~~~a~~~gv~~pi~~~~~~~~~~~~~~g 335 (355)
.......+.++. +.+ .++++.. ..++..++.|++..+.+++.+.++++.+.+
T Consensus 209 ~~~~~~~~~~l~-----d~~~~~~~t~~-------~~l~~l~~~~~~~~~~~a~~~~~~r~~~~~ 261 (262)
T 2rcy_A 209 VKKSDQPVQQLK-----DNIVSPGGITA-------VGLYSLEKNSFKYTVMNAVEAACEKSKAMG 261 (262)
T ss_dssp HHHCSSCHHHHH-----HHHCCTTSHHH-------HHHHHHHHTTHHHHHHHHHHHHHHHHHHHT
T ss_pred HHhcCCCHHHHH-----HhcCCCChHHH-------HHHHHHHHCChHHHHHHHHHHHHHHHHHhc
Confidence 100011122221 122 3444433 445556777999999999999999988754
No 59
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=99.84 E-value=8.9e-20 Score=163.24 Aligned_cols=202 Identities=18% Similarity=0.237 Sum_probs=141.3
Q ss_pred CceEEEEcccHHhHHHHHHHHHCCC----cEEEEeCChhHHHHHHh-CCCCCCCCHHHHhhcCCEEEEeCCCchHHHHHh
Q 018506 45 FESVGFIGLGNMGFRMASNLMKAGY----KMAVHDVNCNVMKMFSD-MGVPTKETPFEVAEASDVVITMLPSSSHVLDVY 119 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~~G~----~V~v~dr~~~~~~~l~~-~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl 119 (355)
+|||+|||+|+||.+++..|.++|| +|++|||++++++.+.+ .|+..+.++.++++++|+||+|+|. +.+++++
T Consensus 2 ~~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~e~~~~aDvVilav~~-~~~~~v~ 80 (247)
T 3gt0_A 2 DKQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKYGLTTTTDNNEVAKNADILILSIKP-DLYASII 80 (247)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHCCEECSCHHHHHHHCSEEEECSCT-TTHHHHC
T ss_pred CCeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhCCEEeCChHHHHHhCCEEEEEeCH-HHHHHHH
Confidence 4799999999999999999999999 99999999999999875 5888888999999999999999974 6888988
Q ss_pred cCCCccccCCCCCCCeEEEEc-CCCCHHHHHHHHHHHhhchhhhccCCCCCceEEeCCCCCChHHHhcCceEEEe--cCC
Q 018506 120 NGPNGLLQGGNSVRPQLLIDS-STIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMV--GGS 196 (355)
Q Consensus 120 ~~~~~~l~~~~~~~~~ivi~~-st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~pv~g~~~~~~~g~~~~~~--gg~ 196 (355)
.++.+.+. ++++||.. ++.... .+.+.++.. .... ..+++.|..++ .|...++. +++
T Consensus 81 ~~l~~~l~-----~~~~vvs~~~gi~~~---~l~~~~~~~---~~~v----~~~p~~p~~~~-----~g~~~~~~~~~~~ 140 (247)
T 3gt0_A 81 NEIKEIIK-----NDAIIVTIAAGKSIE---STENAFNKK---VKVV----RVMPNTPALVG-----EGMSALCPNEMVT 140 (247)
T ss_dssp ---CCSSC-----TTCEEEECSCCSCHH---HHHHHHCSC---CEEE----EEECCGGGGGT-----CEEEEEEECTTCC
T ss_pred HHHHhhcC-----CCCEEEEecCCCCHH---HHHHHhCCC---CcEE----EEeCChHHHHc-----CceEEEEeCCCCC
Confidence 77665543 45677754 444433 444544310 0000 12345554432 24434444 368
Q ss_pred HHHHHHHHHHHHHcCCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCCHHHHHHHHHhcCCCcc
Q 018506 197 EDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTL-GQSLGISASTLTKILNSSSARCW 270 (355)
Q Consensus 197 ~~~~~~v~~ll~~~g~~~~~~g~~g~a~~~Kl~~n~~~~~~~~~~~Ea~~l-a~~~Gi~~~~~~~~~~~~~~~s~ 270 (355)
++.++.++++|+.+|. ++++++........+..... .++..+.|++.. +.+.|++++++.+++..+...++
T Consensus 141 ~~~~~~~~~l~~~~G~-~~~~~e~~~d~~~a~~g~gp--a~~~~~~eal~~a~~~~Gl~~~~a~~~~~~~~~gs~ 212 (247)
T 3gt0_A 141 EKDLEDVLNIFNSFGQ-TEIVSEKLMDVVTSVSGSSP--AYVYMIIEAMADAAVLDGMPRNQAYKFAAQAVLGSA 212 (247)
T ss_dssp HHHHHHHHHHHGGGEE-EEECCGGGHHHHHHHHHHHH--HHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCC-EEEeCHHHccHHHHHhccHH--HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 9999999999999998 66665432222222222222 234457788887 99999999999999998765554
No 60
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=99.84 E-value=3.3e-20 Score=171.72 Aligned_cols=264 Identities=12% Similarity=0.081 Sum_probs=168.1
Q ss_pred CceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCC--------------CCCCHHHHhhcCCEEEEeCC
Q 018506 45 FESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVP--------------TKETPFEVAEASDVVITMLP 110 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~--------------~~~s~~e~~~~aDiVi~~v~ 110 (355)
+|||+|||+|.||+.+|..|+++|++|++|+|++ .+.+++.|.. .++++++ ++.+|+||+++|
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~--~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~-~~~~D~vilavk 78 (312)
T 3hn2_A 2 SLRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD--YEAIAGNGLKVFSINGDFTLPHVKGYRAPEE-IGPMDLVLVGLK 78 (312)
T ss_dssp --CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT--HHHHHHTCEEEEETTCCEEESCCCEESCHHH-HCCCSEEEECCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc--HHHHHhCCCEEEcCCCeEEEeeceeecCHHH-cCCCCEEEEecC
Confidence 3799999999999999999999999999999986 3667665431 2345544 578999999999
Q ss_pred CchHHHHHhcCCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCceEEeCCCCCChHHHhcCceE
Q 018506 111 SSSHVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLT 190 (355)
Q Consensus 111 ~~~~~~~vl~~~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~pv~g~~~~~~~g~~~ 190 (355)
.. ++++++..+.+.+. ++++||.+.++... .+.+.+.++...+.. +..+..+-..++-.....+.-.
T Consensus 79 ~~-~~~~~l~~l~~~l~-----~~~~iv~l~nGi~~-~~~l~~~~~~~~v~~------~~~~~~a~~~~p~~v~~~~~g~ 145 (312)
T 3hn2_A 79 TF-ANSRYEELIRPLVE-----EGTQILTLQNGLGN-EEALATLFGAERIIG------GVAFLCSNRGEPGEVHHLGAGR 145 (312)
T ss_dssp GG-GGGGHHHHHGGGCC-----TTCEEEECCSSSSH-HHHHHHHTCGGGEEE------EEEEEECCBCSSSEEEECEEEE
T ss_pred CC-CcHHHHHHHHhhcC-----CCCEEEEecCCCCc-HHHHHHHCCCCcEEE------EEEEeeeEEcCCcEEEECCCCe
Confidence 64 77888877666653 34677777776532 245666654321110 0122222222111111111112
Q ss_pred EEec----CCHHHHHHHHHHHHHcCCCeEEeCCcchHHHHHHHHHHHHH---------------------HHHHHHHHHH
Q 018506 191 FMVG----GSEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMA---------------------VSMLGVSEAL 245 (355)
Q Consensus 191 ~~~g----g~~~~~~~v~~ll~~~g~~~~~~g~~g~a~~~Kl~~n~~~~---------------------~~~~~~~Ea~ 245 (355)
+.+| .+.+..+.+.++|+..+.+++...++-...|.|++.|...+ .+..++.|+.
T Consensus 146 ~~ig~~~~~~~~~~~~l~~~l~~~g~~~~~~~di~~~~w~Kl~~N~~~n~l~al~~~~~G~l~~~~~~~~l~~~~~~E~~ 225 (312)
T 3hn2_A 146 IILGEFLPRDTGRIEELAAMFRQAGVDCRTTDDLKRARWEKLVWNIPFNGLCALLQQPVNLILARDVSRKLVRGIMLEVI 225 (312)
T ss_dssp EEEEESSCCCSHHHHHHHHHHHHTTCCEEECSCHHHHHHHHHHHHHHHHHHHHHHTCCHHHHTTSHHHHHHHHHHHHHHH
T ss_pred EEEecCCCCccHHHHHHHHHHHhCCCCcEEChHHHHHHHHHHHHHHhHHHHHHHHCCCHHHHHhChhHHHHHHHHHHHHH
Confidence 3333 24567889999999999988888889899999999987643 2456788999
Q ss_pred HHHHHcC--CCH--HHHHHHHHhcCCCcccccCCCCCCCcccCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhCCCChHH
Q 018506 246 TLGQSLG--ISA--STLTKILNSSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLT 321 (355)
Q Consensus 246 ~la~~~G--i~~--~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~gv~~pi~ 321 (355)
.++++.| ++. +....++......+.. ..++..++..|++.+-++. .+++++.++++|+++|++
T Consensus 226 ~va~a~G~~~~~~~~~~~~~~~~~~~~~~~--~sSM~qD~~~gr~tEid~i-----------~G~vv~~a~~~gv~~P~~ 292 (312)
T 3hn2_A 226 AGANAQGLATFIADGYVDDMLEFTDAMGEY--KPSMEIDREEGRPLEIAAI-----------FRTPLAYGAREGIAMPRV 292 (312)
T ss_dssp HHHHTSCCSSCCCTTHHHHHHHHHTTSCSC--CCHHHHHHHTTCCCCHHHH-----------THHHHHHHHHTTCCCHHH
T ss_pred HHHHHcCCccCCCHHHHHHHHHHHhcCCCC--CchHHHHHHhCCCccHHHH-----------hhHHHHHHHHhCCCCCHH
Confidence 9999999 642 2222222211111110 0011223333443333332 358999999999999999
Q ss_pred HHHHHHHHHHHHCCCC
Q 018506 322 SQAQDIYAKLCENGHD 337 (355)
Q Consensus 322 ~~~~~~~~~~~~~g~g 337 (355)
+.++++++.....|+-
T Consensus 293 ~~l~~ll~~~~~~~~~ 308 (312)
T 3hn2_A 293 EMLATLLEQATGEGHH 308 (312)
T ss_dssp HHHHHHHHHHTTC---
T ss_pred HHHHHHHHHHHhcccc
Confidence 9999999988877754
No 61
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=99.83 E-value=2.6e-20 Score=171.65 Aligned_cols=193 Identities=17% Similarity=0.275 Sum_probs=134.3
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHH-----------hCC------------------CCCCCC
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFS-----------DMG------------------VPTKET 94 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~-----------~~g------------------~~~~~s 94 (355)
.++||+|||+|.||.+||..|+++||+|++|||++++++... +.| +..+++
T Consensus 14 ~~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~ 93 (302)
T 1f0y_A 14 IVKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATSTD 93 (302)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEESC
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEEecC
Confidence 457899999999999999999999999999999998876532 222 334678
Q ss_pred HHHHhhcCCEEEEeCCCchHHH-HHhcCCCccccCCCCCCCeEEEEc-CCCCHHHHHHHHHHHhhchhhhccCCCCCceE
Q 018506 95 PFEVAEASDVVITMLPSSSHVL-DVYNGPNGLLQGGNSVRPQLLIDS-STIDPQTSRNISAAVSNCILKEKKDSWENPVM 172 (355)
Q Consensus 95 ~~e~~~~aDiVi~~v~~~~~~~-~vl~~~~~~l~~~~~~~~~ivi~~-st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~ 172 (355)
+.++++++|+||+|+|++.+++ .++..+.+.+. ++++|++. |+..+. .+.+.+.. .....+.||
T Consensus 94 ~~~~~~~aD~Vi~avp~~~~~~~~v~~~l~~~~~-----~~~iv~s~ts~i~~~---~l~~~~~~------~~~~~g~h~ 159 (302)
T 1f0y_A 94 AASVVHSTDLVVEAIVENLKVKNELFKRLDKFAA-----EHTIFASNTSSLQIT---SIANATTR------QDRFAGLHF 159 (302)
T ss_dssp HHHHTTSCSEEEECCCSCHHHHHHHHHHHTTTSC-----TTCEEEECCSSSCHH---HHHTTSSC------GGGEEEEEE
T ss_pred HHHhhcCCCEEEEcCcCcHHHHHHHHHHHHhhCC-----CCeEEEECCCCCCHH---HHHHhcCC------cccEEEEec
Confidence 8888899999999999875543 45554444432 45577654 444443 33332211 001112566
Q ss_pred EeCCCCCChHHHhcCceEEEecC---CHHHHHHHHHHHHHcCCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 018506 173 LDAPVSGGVLAAEAGTLTFMVGG---SEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQ 249 (355)
Q Consensus 173 ~~~pv~g~~~~~~~g~~~~~~gg---~~~~~~~v~~ll~~~g~~~~~~g~~g~a~~~Kl~~n~~~~~~~~~~~Ea~~la~ 249 (355)
.+ |.. .+.+..++++ +++.++.+.++++.+|+.++++++. .+ ++++|++. .+++|++.+++
T Consensus 160 ~~-P~~-------~~~~~~i~~g~~~~~e~~~~~~~l~~~~G~~~v~~~~~-~g---~i~nr~l~----~~~~Ea~~l~~ 223 (302)
T 1f0y_A 160 FN-PVP-------VMKLVEVIKTPMTSQKTFESLVDFSKALGKHPVSCKDT-PG---FIVNRLLV----PYLMEAIRLYE 223 (302)
T ss_dssp CS-STT-------TCCEEEEECCTTCCHHHHHHHHHHHHHTTCEEEEECSC-TT---TTHHHHHH----HHHHHHHHHHH
T ss_pred CC-Ccc-------cCceEEEeCCCCCCHHHHHHHHHHHHHcCCceEEecCc-cc---ccHHHHHH----HHHHHHHHHHH
Confidence 55 321 1233444444 8999999999999999988888762 22 45555543 45799999999
Q ss_pred HcCCCHHHHHHHHHhcC
Q 018506 250 SLGISASTLTKILNSSS 266 (355)
Q Consensus 250 ~~Gi~~~~~~~~~~~~~ 266 (355)
+.|++++++..++..+.
T Consensus 224 ~g~~~~~~id~~~~~g~ 240 (302)
T 1f0y_A 224 RGDASKEDIDTAMKLGA 240 (302)
T ss_dssp TTSSCHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHhCC
Confidence 99999999999987543
No 62
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=99.83 E-value=2.5e-20 Score=181.51 Aligned_cols=191 Identities=21% Similarity=0.280 Sum_probs=141.8
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHh-----------CCC-------------CCCCCHHHHh
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSD-----------MGV-------------PTKETPFEVA 99 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~-----------~g~-------------~~~~s~~e~~ 99 (355)
..+||+|||+|.||.+||..|+++||+|++||+++++++.+.+ .|. ..++++ +.+
T Consensus 4 ~~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~ 82 (483)
T 3mog_A 4 NVQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVTDI-HAL 82 (483)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEECCG-GGG
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeCCH-HHh
Confidence 4579999999999999999999999999999999998877543 232 235566 467
Q ss_pred hcCCEEEEeCCCchHHH-HHhcCCCccccCCCCCCCeEE-EEcCCCCHHHHHHHHHHHhhchhhhccCCCCCceEEeC-C
Q 018506 100 EASDVVITMLPSSSHVL-DVYNGPNGLLQGGNSVRPQLL-IDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDA-P 176 (355)
Q Consensus 100 ~~aDiVi~~v~~~~~~~-~vl~~~~~~l~~~~~~~~~iv-i~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~-p 176 (355)
++||+||+|+|++.+++ +++.++.+.+. +++++ .|+|+.++.. +.+.+.. ...+.+.||+++ |
T Consensus 83 ~~aDlVIeAVpe~~~vk~~v~~~l~~~~~-----~~~IlasntSti~i~~---ia~~~~~------p~~~ig~hf~~Pa~ 148 (483)
T 3mog_A 83 AAADLVIEAASERLEVKKALFAQLAEVCP-----PQTLLTTNTSSISITA---IAAEIKN------PERVAGLHFFNPAP 148 (483)
T ss_dssp GGCSEEEECCCCCHHHHHHHHHHHHHHSC-----TTCEEEECCSSSCHHH---HTTTSSS------GGGEEEEEECSSTT
T ss_pred cCCCEEEEcCCCcHHHHHHHHHHHHHhhc-----cCcEEEecCCCCCHHH---HHHHccC------ccceEEeeecChhh
Confidence 89999999999886664 55555444442 45566 5688877653 3332221 011123677773 3
Q ss_pred CCCChHHHhcCceEEEecC---CHHHHHHHHHHHHHcCCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Q 018506 177 VSGGVLAAEAGTLTFMVGG---SEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGI 253 (355)
Q Consensus 177 v~g~~~~~~~g~~~~~~gg---~~~~~~~v~~ll~~~g~~~~~~g~~g~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gi 253 (355)
++ .++.++++ ++++++.+.++++.+|+.++++++.. + +++||++.. .++|++.++++.+.
T Consensus 149 v~---------~Lvevv~g~~Ts~e~~~~~~~l~~~lGk~~v~v~d~~-G---fi~Nr~l~~----~~~Ea~~l~~~g~~ 211 (483)
T 3mog_A 149 VM---------KLVEVVSGLATAAEVVEQLCELTLSWGKQPVRCHSTP-G---FIVNRVARP----YYSEAWRALEEQVA 211 (483)
T ss_dssp TC---------CEEEEEECSSCCHHHHHHHHHHHHHTTCEEEEEESCT-T---TTHHHHTHH----HHHHHHHHHHTTCS
T ss_pred hC---------CeEEEecCCCCCHHHHHHHHHHHHHhCCEEEEEeccC-c---chHHHHHHH----HHHHHHHHHHhCCC
Confidence 32 45667776 89999999999999999999998742 2 677777665 47899999999999
Q ss_pred CHHHHHHHHHhcC
Q 018506 254 SASTLTKILNSSS 266 (355)
Q Consensus 254 ~~~~~~~~~~~~~ 266 (355)
+++++.+++..+.
T Consensus 212 ~~~~id~a~~~~~ 224 (483)
T 3mog_A 212 APEVIDAALRDGA 224 (483)
T ss_dssp CHHHHHHHHHHTT
T ss_pred CHHHHHHHHHhcC
Confidence 9999999998654
No 63
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=99.82 E-value=7.2e-20 Score=170.08 Aligned_cols=253 Identities=13% Similarity=0.043 Sum_probs=167.4
Q ss_pred CceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCC---------------CCCCCCHHHHhhcCCEEEEeC
Q 018506 45 FESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMG---------------VPTKETPFEVAEASDVVITML 109 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g---------------~~~~~s~~e~~~~aDiVi~~v 109 (355)
+|||+|||+|.||+.+|..|+++|++|++|+|++ .+.+++.| +..+++++++.+.+|+||+||
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~--~~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~~DlVilav 79 (320)
T 3i83_A 2 SLNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD--YETVKAKGIRIRSATLGDYTFRPAAVVRSAAELETKPDCTLLCI 79 (320)
T ss_dssp -CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT--HHHHHHHCEEEEETTTCCEEECCSCEESCGGGCSSCCSEEEECC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh--HHHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCCCCCEEEEec
Confidence 3899999999999999999999999999999986 25565433 223456666666899999999
Q ss_pred CCchHHHHHhcCCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCceEEeCCCCC------ChHH
Q 018506 110 PSSSHVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSG------GVLA 183 (355)
Q Consensus 110 ~~~~~~~~vl~~~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~pv~g------~~~~ 183 (355)
|.. ++++++..+.+.+. ++++|+.+.++.... +.+.+.++.. .++.++++. .-..
T Consensus 80 K~~-~~~~~l~~l~~~l~-----~~t~Iv~~~nGi~~~-~~l~~~~~~~------------~vl~g~~~~~a~~~~pg~v 140 (320)
T 3i83_A 80 KVV-EGADRVGLLRDAVA-----PDTGIVLISNGIDIE-PEVAAAFPDN------------EVISGLAFIGVTRTAPGEI 140 (320)
T ss_dssp CCC-TTCCHHHHHTTSCC-----TTCEEEEECSSSSCS-HHHHHHSTTS------------CEEEEEEEEEEEEEETTEE
T ss_pred CCC-ChHHHHHHHHhhcC-----CCCEEEEeCCCCChH-HHHHHHCCCC------------cEEEEEEEeceEEcCCCEE
Confidence 975 66777776655553 345777777665321 4455555421 233333221 0000
Q ss_pred HhcCceEEEec----CCHHHHHHHHHHHHHcCCCeEEeCCcchHHHHHHHHHHHHH--------------------HHHH
Q 018506 184 AEAGTLTFMVG----GSEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMA--------------------VSML 239 (355)
Q Consensus 184 ~~~g~~~~~~g----g~~~~~~~v~~ll~~~g~~~~~~g~~g~a~~~Kl~~n~~~~--------------------~~~~ 239 (355)
...+.-.+.+| .+.+..+.+.++|+..+.++.+..++-...|.|++.|...+ .+..
T Consensus 141 ~~~~~~~~~ig~~~~~~~~~~~~l~~~l~~~~~~~~~~~di~~~~w~Kl~~N~~~N~ltal~~~~~g~~~~~~~~~l~~~ 220 (320)
T 3i83_A 141 WHQAYGRLMLGNYPGGVSERVKTLAAAFEEAGIDGIATENITTARWQKCVWNAAFNPLSVLSGGLDTLDILSTQEGFVRA 220 (320)
T ss_dssp EEEEEEEEEEEESSSCCCHHHHHHHHHHHHTTSCEEECSCHHHHHHHHHHHHHHHHHHHHHTTSCCHHHHHHHCHHHHHH
T ss_pred EECCCCEEEEecCCCCccHHHHHHHHHHHhCCCCceECHHHHHHHHHHHHHHHhhhHHHHHHCCCHHHHHhCcHHHHHHH
Confidence 11112233343 34567889999999999998888899999999999986432 2456
Q ss_pred HHHHHHHHHHHcCCCH-----HHHHHHHHhcCCCcccccCCCCCCCcccCCCCCCCCCCCcchhhHHHHHHHHHHHHHHh
Q 018506 240 GVSEALTLGQSLGISA-----STLTKILNSSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEV 314 (355)
Q Consensus 240 ~~~Ea~~la~~~Gi~~-----~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~ 314 (355)
++.|+..++++.|++. +.+++........ ..++..++..|++.+-++. .+++++.++++
T Consensus 221 ~~~E~~~va~a~G~~l~~~~~~~~~~~~~~~~~~-----~sSM~qD~~~gr~tEid~i-----------~G~vv~~a~~~ 284 (320)
T 3i83_A 221 IMQEIRAVAAANGHPLPEDIVEKNVASTYKMPPY-----KTSMLVDFEAGQPMETEVI-----------LGNAVRAGRRT 284 (320)
T ss_dssp HHHHHHHHHHHTTCCCCTTHHHHHHHHHHHSCCC-----CCHHHHHHHHTCCCCHHHH-----------THHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCCChHHHHHHHHHHhcCCCC-----CCcHHHHHHhCCCchHHHH-----------ccHHHHHHHHh
Confidence 7889999999999863 2233333222110 0011222333433333332 35799999999
Q ss_pred CCCChHHHHHHHHHHHHHHC
Q 018506 315 GVDCPLTSQAQDIYAKLCEN 334 (355)
Q Consensus 315 gv~~pi~~~~~~~~~~~~~~ 334 (355)
|+++|+++.++++++..+.+
T Consensus 285 gv~~P~~~~l~~~l~~~e~~ 304 (320)
T 3i83_A 285 RVAIPHLESVYALMKLLELR 304 (320)
T ss_dssp TCCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHH
Confidence 99999999999988876653
No 64
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=99.82 E-value=4.4e-19 Score=167.07 Aligned_cols=267 Identities=12% Similarity=0.153 Sum_probs=162.0
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhC-CC--------------CCCCCHHHHhhcCCEEEEe
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDM-GV--------------PTKETPFEVAEASDVVITM 108 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~-g~--------------~~~~s~~e~~~~aDiVi~~ 108 (355)
++|||+|||+|.||..+|..|+++||+|++|+|++++++.+.+. +. ...+++.++++++|+||+|
T Consensus 3 ~~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~ 82 (359)
T 1bg6_A 3 ESKTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIV 82 (359)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEEC
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEEEe
Confidence 45899999999999999999999999999999999999888764 21 2456888888899999999
Q ss_pred CCCchHHHHHhcCCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCceEEe---CCCCCChHH--
Q 018506 109 LPSSSHVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLD---APVSGGVLA-- 183 (355)
Q Consensus 109 v~~~~~~~~vl~~~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~---~pv~g~~~~-- 183 (355)
+|.. ..++++..+.+.+. ++++|+++.+..+.. .++.+.+.+. + ...+.|++ .|+.+....
T Consensus 83 v~~~-~~~~~~~~l~~~l~-----~~~~vv~~~~~~~~~-~~~~~~l~~~-----~--~~~v~~~~~~~~~~~~~~~gpg 148 (359)
T 1bg6_A 83 VPAI-HHASIAANIASYIS-----EGQLIILNPGATGGA-LEFRKILREN-----G--APEVTIGETSSMLFTCRSERPG 148 (359)
T ss_dssp SCGG-GHHHHHHHHGGGCC-----TTCEEEESSCCSSHH-HHHHHHHHHT-----T--CCCCEEEEESSCSEEEECSSTT
T ss_pred CCch-HHHHHHHHHHHhCC-----CCCEEEEcCCCchHH-HHHHHHHHhc-----C--CCCeEEEEecCCcEEEEeCCCC
Confidence 9986 55777766544443 456788885534433 2344444321 1 00123433 444322111
Q ss_pred -Hh----cCceEEEe---cCCHHHHHHHHHHHHHcCCCeEEeCCc-------------------chHHHHH------HH-
Q 018506 184 -AE----AGTLTFMV---GGSEDAYQAAKPLFLSMGKNTIYCGGA-------------------GNGAAAK------IC- 229 (355)
Q Consensus 184 -~~----~g~~~~~~---gg~~~~~~~v~~ll~~~g~~~~~~g~~-------------------g~a~~~K------l~- 229 (355)
.. .+...+-. +++++.++.++++|..+. ...++ +.+...| +-
T Consensus 149 ~v~~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~~----~~~di~~k~~~nvn~~~n~~~al~~~~~~~~~~~~~~~~~ 224 (359)
T 1bg6_A 149 QVTVNAIKGAMDFACLPAAKAGWALEQIGSVLPQYV----AVENVLHTSLTNVNAVMHPLPTLLNAARCESGTPFQYYLE 224 (359)
T ss_dssp EEEEEEECSCEEEEEESGGGHHHHHHHHTTTCTTEE----ECSCHHHHHHCCHHHHHTHHHHHTTHHHHHTTCCCBHHHH
T ss_pred EEEEEEeecceEEEeccccccHHHHHHHHHHhhhcE----EcCChHhhhccCCCccccHHHHHhhhchhhcCCccchhhc
Confidence 10 11211111 245556777777776542 11211 1111111 00
Q ss_pred --HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcCCCcccc--cCCCCCCCcccCCCCCCCCCCCcchh--hHHHH
Q 018506 230 --NNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCWSS--DSYNPVPGVMEGVPASRNYGGGFASK--LMAKD 303 (355)
Q Consensus 230 --~n~~~~~~~~~~~Ea~~la~~~Gi~~~~~~~~~~~~~~~s~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~kd 303 (355)
.+........++.|+..++++.|++++++.+.+......++.. ... ..+.++.+. ..+ ..++ .+.||
T Consensus 225 ~~~~~~~~~~~~~~~E~~~va~a~G~~~~~~~~~~~~~~~~~~~~l~~~~-~~~sm~~d~-----~~~-~e~~~~~~~~D 297 (359)
T 1bg6_A 225 GITPSVGSLAEKVDAERIAIAKAFDLNVPSVCEWYKESYGQSPATIYEAV-QGNPAYRGI-----AGP-INLNTRYFFED 297 (359)
T ss_dssp HCCHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHC-------CCSHHHHH-HTCGGGTTC-----BCC-SSSCCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHhCCCcccHHHHH-hcchhhcCC-----CCC-CCCCccceecC
Confidence 1223455678889999999999999877777766543322210 000 011122211 111 1234 67899
Q ss_pred H----HHHHHHHHHhCCCChHHHHHHHHHHHHHHCC
Q 018506 304 L----NLALASAKEVGVDCPLTSQAQDIYAKLCENG 335 (355)
Q Consensus 304 ~----~~~~~~a~~~gv~~pi~~~~~~~~~~~~~~g 335 (355)
+ +.++++|+++|+++|+++.++++++.....+
T Consensus 298 ~~~~~g~~~~~a~~~gv~~P~~~~l~~~~~~~~~~~ 333 (359)
T 1bg6_A 298 VSTGLVPLSELGRAVNVPTPLIDAVLDLISSLIDTD 333 (359)
T ss_dssp HHTTHHHHHHHHHHTTCCCHHHHHHHHHHHHHTTCC
T ss_pred cCccHHHHHHHHHHcCCCchHHHHHHHHHHHHHCCC
Confidence 8 7999999999999999999999999876653
No 65
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=99.82 E-value=2.5e-19 Score=165.66 Aligned_cols=176 Identities=16% Similarity=0.242 Sum_probs=138.8
Q ss_pred CCCceEEEEcccHHhHHHHHHHHHCCC--cEEEEeCChhHHHHHHhCCCC--CCCCHHH-HhhcCCEEEEeCCCchHHHH
Q 018506 43 CQFESVGFIGLGNMGFRMASNLMKAGY--KMAVHDVNCNVMKMFSDMGVP--TKETPFE-VAEASDVVITMLPSSSHVLD 117 (355)
Q Consensus 43 ~~~mkIgiIG~G~mG~~ia~~L~~~G~--~V~v~dr~~~~~~~l~~~g~~--~~~s~~e-~~~~aDiVi~~v~~~~~~~~ 117 (355)
+.+|||+|||+|.||.++|..|.++|+ +|++|||++++++.+.+.|+. .++++.+ +++++|+||+|+|.. .+.+
T Consensus 31 ~~~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~~~~~~~aDvVilavp~~-~~~~ 109 (314)
T 3ggo_A 31 LSMQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVR-TFRE 109 (314)
T ss_dssp CSCSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTTGGGGGCCSEEEECSCGG-GHHH
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCHHHHhhccCCEEEEeCCHH-HHHH
Confidence 345899999999999999999999999 999999999999988888763 4678888 889999999999975 6777
Q ss_pred HhcCCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCceEE-eCCCCCC----hHHHh----cCc
Q 018506 118 VYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVML-DAPVSGG----VLAAE----AGT 188 (355)
Q Consensus 118 vl~~~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~-~~pv~g~----~~~~~----~g~ 188 (355)
++.++.+.++ ++++|+|++++++...+.+.+.++. .|+ ..|+.|+ +..+. .+.
T Consensus 110 vl~~l~~~l~-----~~~iv~d~~Svk~~~~~~~~~~l~~-------------~~v~~hPm~G~e~sG~~~A~~~Lf~g~ 171 (314)
T 3ggo_A 110 IAKKLSYILS-----EDATVTDQGSVKGKLVYDLENILGK-------------RFVGGHPIAGTEKSGVEYSLDNLYEGK 171 (314)
T ss_dssp HHHHHHHHSC-----TTCEEEECCSCCTHHHHHHHHHHGG-------------GEECEEECCCCCCCSGGGCCTTTTTTC
T ss_pred HHHHHhhccC-----CCcEEEECCCCcHHHHHHHHHhcCC-------------CEEecCcccCCcccchhhhhhhhhcCC
Confidence 7766544442 5679999999988777777776542 233 3566653 33322 567
Q ss_pred eEEEec---CCHHHHHHHHHHHHHcCCCeEEeCCcchHHHHHHHHHHHHHHH
Q 018506 189 LTFMVG---GSEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVS 237 (355)
Q Consensus 189 ~~~~~g---g~~~~~~~v~~ll~~~g~~~~~~g~~g~a~~~Kl~~n~~~~~~ 237 (355)
..+++. ++++.++.++++|+.+|.+++++++......++++........
T Consensus 172 ~~il~~~~~~~~~~~~~v~~l~~~~G~~v~~~~~~~hD~~~a~~s~lph~~a 223 (314)
T 3ggo_A 172 KVILTPTKKTDKKRLKLVKRVWEDVGGVVEYMSPELHDYVFGVVSHLPHAVA 223 (314)
T ss_dssp EEEECCCTTSCHHHHHHHHHHHHHTTCEEEECCHHHHHHHHHHHTHHHHHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHcCCEEEEcCHHHHHHHHHHHHHHHHHHH
Confidence 777773 5889999999999999999999998888888888877655443
No 66
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=99.81 E-value=1.2e-19 Score=174.35 Aligned_cols=191 Identities=17% Similarity=0.189 Sum_probs=133.5
Q ss_pred CCCCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHH--------HHHhCCC-------------CCCCCHHHHhh
Q 018506 42 SCQFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMK--------MFSDMGV-------------PTKETPFEVAE 100 (355)
Q Consensus 42 ~~~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~--------~l~~~g~-------------~~~~s~~e~~~ 100 (355)
++.++||+|||+|.||..||..|+++|++|++||+++++.. .+.+.|. ..+++++ +++
T Consensus 51 ~~~i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t~dl~-al~ 129 (460)
T 3k6j_A 51 AYDVNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKITSDFH-KLS 129 (460)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEESCGG-GCT
T ss_pred cccCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEeCCHH-HHc
Confidence 35668999999999999999999999999999999998432 2333332 3456764 678
Q ss_pred cCCEEEEeCCCchHHHH-HhcCCCccccCCCCCCCeEEEE-cCCCCHHHHHHHHHHHhhchhhhccCCCCCceEEeCCCC
Q 018506 101 ASDVVITMLPSSSHVLD-VYNGPNGLLQGGNSVRPQLLID-SSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVS 178 (355)
Q Consensus 101 ~aDiVi~~v~~~~~~~~-vl~~~~~~l~~~~~~~~~ivi~-~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~pv~ 178 (355)
+||+||+|||++.+++. ++.++.+.++ +++++++ +|+.++. .+.+.+.+ ...+.+.||++ |+.
T Consensus 130 ~aDlVIeAVpe~~~vk~~v~~~l~~~~~-----~~aIlasnTSsl~i~---~ia~~~~~------p~r~iG~Hffn-Pv~ 194 (460)
T 3k6j_A 130 NCDLIVESVIEDMKLKKELFANLENICK-----STCIFGTNTSSLDLN---EISSVLRD------PSNLVGIHFFN-PAN 194 (460)
T ss_dssp TCSEEEECCCSCHHHHHHHHHHHHTTSC-----TTCEEEECCSSSCHH---HHHTTSSS------GGGEEEEECCS-STT
T ss_pred cCCEEEEcCCCCHHHHHHHHHHHHhhCC-----CCCEEEecCCChhHH---HHHHhccC------CcceEEEEecc-hhh
Confidence 99999999998766654 4444443432 4567754 5555543 34433321 00112367777 332
Q ss_pred CChHHHhcCceE-EEecC--CHHHHHHHHHHHHHcCCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Q 018506 179 GGVLAAEAGTLT-FMVGG--SEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISA 255 (355)
Q Consensus 179 g~~~~~~~g~~~-~~~gg--~~~~~~~v~~ll~~~g~~~~~~g~~g~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gi~~ 255 (355)
...+. ++.|. ++++++.+.++++.+|+.++++++ +.+ .++|+++.. .++|++.++++.|+++
T Consensus 195 -------~m~LvEIv~g~~Ts~e~~~~~~~l~~~lGk~~v~v~d-~pG---fi~Nril~~----~~~EA~~l~~~~Ga~~ 259 (460)
T 3k6j_A 195 -------VIRLVEIIYGSHTSSQAIATAFQACESIKKLPVLVGN-CKS---FVFNRLLHV----YFDQSQKLMYEYGYLP 259 (460)
T ss_dssp -------TCCEEEEECCSSCCHHHHHHHHHHHHHTTCEEEEESS-CCH---HHHHHHHHH----HHHHHHHHHHTSCCCH
T ss_pred -------hCCEEEEEeCCCCCHHHHHHHHHHHHHhCCEEEEEec-ccH---HHHHHHHHH----HHHHHHHHHHHcCCCH
Confidence 12233 34442 899999999999999999999997 333 244555443 4789999999999999
Q ss_pred HHHHHHHH
Q 018506 256 STLTKILN 263 (355)
Q Consensus 256 ~~~~~~~~ 263 (355)
+++.+++.
T Consensus 260 e~ID~a~~ 267 (460)
T 3k6j_A 260 HQIDKIIT 267 (460)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999987
No 67
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=99.81 E-value=7.4e-19 Score=160.15 Aligned_cols=176 Identities=17% Similarity=0.276 Sum_probs=136.4
Q ss_pred CceEEEEcccHHhHHHHHHHHHCCC--cEEEEeCChhHHHHHHhCCCC--CCCCHHHHhh-cCCEEEEeCCCchHHHHHh
Q 018506 45 FESVGFIGLGNMGFRMASNLMKAGY--KMAVHDVNCNVMKMFSDMGVP--TKETPFEVAE-ASDVVITMLPSSSHVLDVY 119 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~~G~--~V~v~dr~~~~~~~l~~~g~~--~~~s~~e~~~-~aDiVi~~v~~~~~~~~vl 119 (355)
||||+|||+|.||.+++..|.++|+ +|++|||++++.+.+.+.|+. ..+++.++++ ++|+||+|+|.. .+.+++
T Consensus 1 m~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~aDvVilavp~~-~~~~v~ 79 (281)
T 2g5c_A 1 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVR-TFREIA 79 (281)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEECSCHH-HHHHHH
T ss_pred CcEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCcccccCCHHHHhcCCCCEEEEcCCHH-HHHHHH
Confidence 4799999999999999999999999 899999999999888877765 3567888888 999999999965 677777
Q ss_pred cCCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCceEEeCCCCC----ChHHH----hcCceEE
Q 018506 120 NGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSG----GVLAA----EAGTLTF 191 (355)
Q Consensus 120 ~~~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~pv~g----~~~~~----~~g~~~~ 191 (355)
..+.+.++ ++.+|++++++.+...+.+.+.++. ..+...|+.+ ++..+ ..+..++
T Consensus 80 ~~l~~~l~-----~~~iv~~~~~~~~~~~~~l~~~l~~------------~~v~~~p~~~~~~~gp~~a~~~l~~g~~~~ 142 (281)
T 2g5c_A 80 KKLSYILS-----EDATVTDQGSVKGKLVYDLENILGK------------RFVGGHPIAGTEKSGVEYSLDNLYEGKKVI 142 (281)
T ss_dssp HHHHHHSC-----TTCEEEECCSCCTHHHHHHHHHHGG------------GEECEEEECCCSCCSGGGCCSSTTTTCEEE
T ss_pred HHHHhhCC-----CCcEEEECCCCcHHHHHHHHHhccc------------cceeeccccCCccCChhhhhhHHhCCCCEE
Confidence 65433332 4569999999887766777766642 0122244443 23332 2566677
Q ss_pred Ee---cCCHHHHHHHHHHHHHcCCCeEEeCCcchHHHHHHHHHHHHHHHH
Q 018506 192 MV---GGSEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSM 238 (355)
Q Consensus 192 ~~---gg~~~~~~~v~~ll~~~g~~~~~~g~~g~a~~~Kl~~n~~~~~~~ 238 (355)
++ +++++..+.++++|+.+|.+++++++...+.++|++.|.......
T Consensus 143 ~~~~~~~~~~~~~~v~~l~~~~g~~~~~~~~~~~d~~~~~~~~~~~~~a~ 192 (281)
T 2g5c_A 143 LTPTKKTDKKRLKLVKRVWEDVGGVVEYMSPELHDYVFGVVSHLPHAVAF 192 (281)
T ss_dssp ECCCSSSCHHHHHHHHHHHHHTTCEEEECCHHHHHHHHHHHTHHHHHHHH
T ss_pred EecCCCCCHHHHHHHHHHHHHcCCEEEEcCHHHHHHHHHHHHHHHHHHHH
Confidence 77 678999999999999999988899987789999999998765433
No 68
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=99.80 E-value=4.3e-19 Score=161.97 Aligned_cols=196 Identities=15% Similarity=0.181 Sum_probs=138.6
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhC-----------C--------------CCCCCCHHHH
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDM-----------G--------------VPTKETPFEV 98 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~-----------g--------------~~~~~s~~e~ 98 (355)
.++||+|||+|.||+.||..|+++|++|++|||++++++.+.+. + +..++++.++
T Consensus 3 ~~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~ 82 (283)
T 4e12_A 3 GITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQA 82 (283)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHHH
Confidence 45789999999999999999999999999999999988766542 1 3556788888
Q ss_pred hhcCCEEEEeCCCchHH-HHHhcCCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCceEEeCCC
Q 018506 99 AEASDVVITMLPSSSHV-LDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPV 177 (355)
Q Consensus 99 ~~~aDiVi~~v~~~~~~-~~vl~~~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~pv 177 (355)
++++|+||+++|...++ +.++.++.+.+. ++.++++.+++.+. ..+.+.+... ....+.|+.+++
T Consensus 83 ~~~aDlVi~av~~~~~~~~~v~~~l~~~~~-----~~~il~s~tS~~~~--~~la~~~~~~------~~~ig~h~~~p~- 148 (283)
T 4e12_A 83 VKDADLVIEAVPESLDLKRDIYTKLGELAP-----AKTIFATNSSTLLP--SDLVGYTGRG------DKFLALHFANHV- 148 (283)
T ss_dssp TTTCSEEEECCCSCHHHHHHHHHHHHHHSC-----TTCEEEECCSSSCH--HHHHHHHSCG------GGEEEEEECSST-
T ss_pred hccCCEEEEeccCcHHHHHHHHHHHHhhCC-----CCcEEEECCCCCCH--HHHHhhcCCC------cceEEEccCCCc-
Confidence 99999999999986444 345544433332 45688755444432 3455544321 111125666532
Q ss_pred CCChHHHhcCceEEEecC---CHHHHHHHHHHHHHcCCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Q 018506 178 SGGVLAAEAGTLTFMVGG---SEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGIS 254 (355)
Q Consensus 178 ~g~~~~~~~g~~~~~~gg---~~~~~~~v~~ll~~~g~~~~~~g~~g~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gi~ 254 (355)
....+..++.+ +++.++.++++++.+|+.+++++....+. ++++++. ..+.|++.++++.+++
T Consensus 149 -------~~~~lvevv~~~~t~~~~~~~~~~l~~~~g~~~v~v~~~~~g~---i~nr~~~----~~~~ea~~l~~~g~~~ 214 (283)
T 4e12_A 149 -------WVNNTAEVMGTTKTDPEVYQQVVEFASAIGMVPIELKKEKAGY---VLNSLLV----PLLDAAAELLVDGIAD 214 (283)
T ss_dssp -------TTSCEEEEEECTTSCHHHHHHHHHHHHHTTCEEEECSSCCTTT---THHHHHH----HHHHHHHHHHHTTSCC
T ss_pred -------ccCceEEEEeCCCCCHHHHHHHHHHHHHcCCEEEEEecCCCCE---EehHHHH----HHHHHHHHHHHhCCCC
Confidence 22344555554 78999999999999999999885423333 3444443 3578999999999999
Q ss_pred HHHHHHHHHhcCC
Q 018506 255 ASTLTKILNSSSA 267 (355)
Q Consensus 255 ~~~~~~~~~~~~~ 267 (355)
++++.+++..+.+
T Consensus 215 ~~~id~~~~~~~g 227 (283)
T 4e12_A 215 PETIDKTWRIGTG 227 (283)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHhccC
Confidence 9999999986543
No 69
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=99.79 E-value=2.6e-18 Score=156.39 Aligned_cols=195 Identities=14% Similarity=0.183 Sum_probs=142.4
Q ss_pred ceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCC--CCCCHHHHhhcCCEEEEeCCCchHHHHHhcCCC
Q 018506 46 ESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVP--TKETPFEVAEASDVVITMLPSSSHVLDVYNGPN 123 (355)
Q Consensus 46 mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~--~~~s~~e~~~~aDiVi~~v~~~~~~~~vl~~~~ 123 (355)
|||+|||+|.||.+++..|.+.||+|++|||++++++.+.+.|.. ..+++.++ +++|+||+|+|. ..+++++..+.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~D~vi~av~~-~~~~~~~~~l~ 78 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLL-QTAKIIFLCTPI-QLILPTLEKLI 78 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGG-TTCSEEEECSCH-HHHHHHHHHHG
T ss_pred CEEEEEcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCCccccCCHHHh-CCCCEEEEECCH-HHHHHHHHHHH
Confidence 689999999999999999999999999999999999988877764 45678888 899999999995 57788877654
Q ss_pred ccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCceEEeCCCCC----ChHHH----hcCceEEEec-
Q 018506 124 GLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSG----GVLAA----EAGTLTFMVG- 194 (355)
Q Consensus 124 ~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~pv~g----~~~~~----~~g~~~~~~g- 194 (355)
+.+. ++++|+++++.++...+.+.+.+. ..+...|+.| ++..+ ..+..++++.
T Consensus 79 ~~~~-----~~~~vv~~~~~~~~~~~~~~~~~~-------------~~~~~~p~~g~~~~gp~~a~~~~~~g~~~~~~~~ 140 (279)
T 2f1k_A 79 PHLS-----PTAIVTDVASVKTAIAEPASQLWS-------------GFIGGHPMAGTAAQGIDGAEENLFVNAPYVLTPT 140 (279)
T ss_dssp GGSC-----TTCEEEECCSCCHHHHHHHHHHST-------------TCEEEEECCCCSCSSGGGCCTTTTTTCEEEEEEC
T ss_pred hhCC-----CCCEEEECCCCcHHHHHHHHHHhC-------------CEeecCcccCCccCCHHHHhHHHhCCCcEEEecC
Confidence 4442 457999998888776555544321 1223336553 22222 2455555553
Q ss_pred --CCHHHHHHHHHHHHHcCCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC--HHHHHHHHHh
Q 018506 195 --GSEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGIS--ASTLTKILNS 264 (355)
Q Consensus 195 --g~~~~~~~v~~ll~~~g~~~~~~g~~g~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gi~--~~~~~~~~~~ 264 (355)
++++..+.++++|+.+|.+++++++.....+.|++.|...+... ++.++ +...|++ .+....++..
T Consensus 141 ~~~~~~~~~~v~~l~~~~g~~~~~~~~~~~~~~~~~~~~~p~~i~~-al~~~---~~~~~~~~~~~~~~~l~~~ 210 (279)
T 2f1k_A 141 EYTDPEQLACLRSVLEPLGVKIYLCTPADHDQAVAWISHLPVMVSA-ALIQA---CAGEKDGDILKLAQNLASS 210 (279)
T ss_dssp TTCCHHHHHHHHHHHGGGTCEEEECCHHHHHHHHHHHTHHHHHHHH-HHHHH---HHTCSCHHHHHHHHHHCCH
T ss_pred CCCCHHHHHHHHHHHHHcCCEEEEcCHHHHHHHHHHHhhHHHHHHH-HHHHH---HHhcccccchhHHHhhcCC
Confidence 47889999999999999989999988899999999998555443 33333 3455655 4555555543
No 70
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=99.78 E-value=3.4e-19 Score=156.67 Aligned_cols=170 Identities=19% Similarity=0.248 Sum_probs=122.2
Q ss_pred CCCceEEEEcccHHhHHHHHHHHHCCCcEEE-EeCChhHHHHHHh-CCCCCCCCHHHHhhcCCEEEEeCCCchHHHHHhc
Q 018506 43 CQFESVGFIGLGNMGFRMASNLMKAGYKMAV-HDVNCNVMKMFSD-MGVPTKETPFEVAEASDVVITMLPSSSHVLDVYN 120 (355)
Q Consensus 43 ~~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v-~dr~~~~~~~l~~-~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl~ 120 (355)
|+||||+|||+|+||.+++..|.++|++|++ |+|++++++.+.+ .+.....+..+.++++|+||+|+|. +.+++++.
T Consensus 21 m~mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~~aDvVilavp~-~~~~~v~~ 99 (220)
T 4huj_A 21 QSMTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRFGASVKAVELKDALQADVVILAVPY-DSIADIVT 99 (220)
T ss_dssp GGSCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHHTTTEEECCHHHHTTSSEEEEESCG-GGHHHHHT
T ss_pred hcCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHhCCCcccChHHHHhcCCEEEEeCCh-HHHHHHHH
Confidence 5578999999999999999999999999999 9999999988765 4666666667778899999999985 68889888
Q ss_pred CCCccccCCCCCCCeEEEEcCCCCH------------HHHHHHHHHHhhchhhhccCCCCCceEEeCCCCC-ChHHHhcC
Q 018506 121 GPNGLLQGGNSVRPQLLIDSSTIDP------------QTSRNISAAVSNCILKEKKDSWENPVMLDAPVSG-GVLAAEAG 187 (355)
Q Consensus 121 ~~~~~l~~~~~~~~~ivi~~st~~~------------~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~pv~g-~~~~~~~g 187 (355)
.+.+ + ++++|+++++..+ ...+.+.+.++...+.. .+....+++.. ++.....+
T Consensus 100 ~l~~-~------~~~ivi~~~~g~~~~~~~~~~~~~~~~~~~l~~~l~~~~vv~------~~~~~~~~v~~~g~~~~~~~ 166 (220)
T 4huj_A 100 QVSD-W------GGQIVVDASNAIDFPAFKPRDLGGRLSTEIVSELVPGAKVVK------AFNTLPAAVLAADPDKGTGS 166 (220)
T ss_dssp TCSC-C------TTCEEEECCCCBCTTTCCBCCCTTCCHHHHHHHHSTTCEEEE------ESCSSCHHHHTSCSBCSSCE
T ss_pred Hhhc-c------CCCEEEEcCCCCCcccccccccCCCcHHHHHHHHCCCCCEEE------CCCCCCHHHhhhCcccCCCC
Confidence 7644 2 3569999987663 14456666654211000 01111112222 11111122
Q ss_pred ceEEEecCCHHHHHHHHHHHHHcCCCeEEeCCcchHHHH
Q 018506 188 TLTFMVGGSEDAYQAAKPLFLSMGKNTIYCGGAGNGAAA 226 (355)
Q Consensus 188 ~~~~~~gg~~~~~~~v~~ll~~~g~~~~~~g~~g~a~~~ 226 (355)
...++.|.++++.+.++++++.+|.+++++|+++.+.++
T Consensus 167 ~~v~~~g~~~~~~~~v~~l~~~~G~~~~~~G~l~~a~~~ 205 (220)
T 4huj_A 167 RVLFLSGNHSDANRQVAELISSLGFAPVDLGTLAASGPI 205 (220)
T ss_dssp EEEEEEESCHHHHHHHHHHHHHTTCEEEECCSHHHHHHH
T ss_pred eeEEEeCCCHHHHHHHHHHHHHhCCCeEeeCChhhcchh
Confidence 335556678899999999999999999999998887665
No 71
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=99.78 E-value=1.1e-18 Score=152.21 Aligned_cols=173 Identities=16% Similarity=0.247 Sum_probs=132.8
Q ss_pred ceEEEEc-ccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhC-C-------CCCCCCHHHHhhcCCEEEEeCCCchHHH
Q 018506 46 ESVGFIG-LGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDM-G-------VPTKETPFEVAEASDVVITMLPSSSHVL 116 (355)
Q Consensus 46 mkIgiIG-~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~-g-------~~~~~s~~e~~~~aDiVi~~v~~~~~~~ 116 (355)
|||+||| +|.||..++..|.++|++|++|+|++++.+.+.+. + +. .+++.++++++|+||+++|. ..++
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~Vi~~~~~-~~~~ 78 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASIT-GMKNEDAAEACDIAVLTIPW-EHAI 78 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEE-EEEHHHHHHHCSEEEECSCH-HHHH
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccccccCCCC-hhhHHHHHhcCCEEEEeCCh-hhHH
Confidence 6899999 99999999999999999999999999988776542 2 23 35777888999999999995 5677
Q ss_pred HHhcCCCccccCCCCCCCeEEEEcCCCCH------------HHHHHHHHHHhhchhhhccCCCCCceEEeC--CCCCChH
Q 018506 117 DVYNGPNGLLQGGNSVRPQLLIDSSTIDP------------QTSRNISAAVSNCILKEKKDSWENPVMLDA--PVSGGVL 182 (355)
Q Consensus 117 ~vl~~~~~~l~~~~~~~~~ivi~~st~~~------------~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~--pv~g~~~ 182 (355)
+++..+.+.+ ++++++++++... ...+++.+.++. ..++.+ |+.+...
T Consensus 79 ~~~~~l~~~~------~~~~vi~~~~g~~~~~~~~~~~~g~~~~~~l~~~~~~------------~~~v~~~~~~~~~~~ 140 (212)
T 1jay_A 79 DTARDLKNIL------REKIVVSPLVPVSRGAKGFTYSSERSAAEIVAEVLES------------EKVVSALHTIPAARF 140 (212)
T ss_dssp HHHHHTHHHH------TTSEEEECCCCEECCTTCCEECCSSCHHHHHHHHHTC------------SCEEECCTTCCHHHH
T ss_pred HHHHHHHHHc------CCCEEEEcCCCcCcCCceeecCCCCcHHHHHHHhCCC------------CeEEEEccchHHHHh
Confidence 8776543333 2568999988433 225666666531 345554 5543333
Q ss_pred HH--hcCceEEEecCC-HHHHHHHHHHHHHc-CCCeEEeCCcchHHHHHHHHHHHHHHHH
Q 018506 183 AA--EAGTLTFMVGGS-EDAYQAAKPLFLSM-GKNTIYCGGAGNGAAAKICNNLTMAVSM 238 (355)
Q Consensus 183 ~~--~~g~~~~~~gg~-~~~~~~v~~ll~~~-g~~~~~~g~~g~a~~~Kl~~n~~~~~~~ 238 (355)
.. ..+.++++++|+ ++..+.++++|+.+ |.+++++++.+.+.++|++.|.+.....
T Consensus 141 ~~~~~~~~~~~~~~g~~~~~~~~v~~l~~~~~G~~~~~~~~~~~a~~~k~~~~~~~~~~~ 200 (212)
T 1jay_A 141 ANLDEKFDWDVPVCGDDDESKKVVMSLISEIDGLRPLDAGPLSNSRLVESLTPLILNIMR 200 (212)
T ss_dssp HCTTCCCCEEEEEEESCHHHHHHHHHHHHHSTTEEEEEEESGGGHHHHHTHHHHHHHHHH
T ss_pred hCcCCCCCccEEEECCcHHHHHHHHHHHHHcCCCCceeccchhHHHHhcchHHHHHHHHH
Confidence 32 456677888775 89999999999999 9999999999999999999998776543
No 72
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=99.77 E-value=3.5e-18 Score=157.09 Aligned_cols=196 Identities=16% Similarity=0.188 Sum_probs=138.3
Q ss_pred ccccccccCCCCCCCCCceEEEEc-ccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEE
Q 018506 29 SSAMRRFFSSQVPSCQFESVGFIG-LGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVIT 107 (355)
Q Consensus 29 ~~~~~~~~~~~~~~~~~mkIgiIG-~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~ 107 (355)
++.++.|....+ .++||+||| +|+||.+++..|.++|++|++|||+++. ++.++++++|+||+
T Consensus 8 ~~~~~~~~~~~~---~~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~-------------~~~~~~~~aDvVil 71 (298)
T 2pv7_A 8 NENQFGFKTINS---DIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA-------------VAESILANADVVIV 71 (298)
T ss_dssp -----CCCCSCT---TCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG-------------GHHHHHTTCSEEEE
T ss_pred hhhccCccccCC---CCCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCccc-------------CHHHHhcCCCEEEE
Confidence 445567754422 346899999 9999999999999999999999998752 56788899999999
Q ss_pred eCCCchHHHHHhcCCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCceEEeCCCCCChHHHhcC
Q 018506 108 MLPSSSHVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAG 187 (355)
Q Consensus 108 ~v~~~~~~~~vl~~~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~pv~g~~~~~~~g 187 (355)
|||.. .+.+++..+.+.++ ++++|+|++++.....+.+.+.++ . ..+...|++|+......+
T Consensus 72 avp~~-~~~~vl~~l~~~l~-----~~~iv~~~~svk~~~~~~~~~~~~--------~----~~v~~hP~~g~~~~~~~g 133 (298)
T 2pv7_A 72 SVPIN-LTLETIERLKPYLT-----ENMLLADLTSVKREPLAKMLEVHT--------G----AVLGLHPMFGADIASMAK 133 (298)
T ss_dssp CSCGG-GHHHHHHHHGGGCC-----TTSEEEECCSCCHHHHHHHHHHCS--------S----EEEEEEECSCTTCSCCTT
T ss_pred eCCHH-HHHHHHHHHHhhcC-----CCcEEEECCCCCcHHHHHHHHhcC--------C----CEEeeCCCCCCCchhhcC
Confidence 99975 68888876554442 457999999988765555544321 0 234446877765444456
Q ss_pred ceEEEecC-CHHHHHHHHHHHHHcCCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Q 018506 188 TLTFMVGG-SEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKIL 262 (355)
Q Consensus 188 ~~~~~~gg-~~~~~~~v~~ll~~~g~~~~~~g~~g~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gi~~~~~~~~~ 262 (355)
..++++.+ +++..+.++++|+.+|.+++++++.....+++++.+......+ .+.|++. +.|++.++..++.
T Consensus 134 ~~~~l~~~~~~~~~~~v~~l~~~~G~~~~~~~~~~~d~~~a~~~~~p~~~a~-~l~~~l~---~~g~~~~~~~~la 205 (298)
T 2pv7_A 134 QVVVRCDGRFPERYEWLLEQIQIWGAKIYQTNATEHDHNMTYIQALRHFSTF-ANGLHLS---KQPINLANLLALS 205 (298)
T ss_dssp CEEEEEEEECGGGTHHHHHHHHHTTCEEEECCHHHHHHHHHHHTHHHHHHHH-HHHHHHT---TSSCCHHHHHHTC
T ss_pred CeEEEecCCCHHHHHHHHHHHHHcCCEEEECCHHHHHHHHHHHHHHHHHHHH-HHHHHHH---hcCCCHHHHHhhc
Confidence 65666544 6888999999999999988888887778888888887655432 2334432 3777766555443
No 73
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=99.77 E-value=2.7e-18 Score=159.86 Aligned_cols=175 Identities=13% Similarity=0.120 Sum_probs=136.6
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhc----CCEEEEeCCCchHHHHHh
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEA----SDVVITMLPSSSHVLDVY 119 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~----aDiVi~~v~~~~~~~~vl 119 (355)
..+||+|||+|.||.+|+..|.++|++|++|||++++++.+.+.|+..+.++.+++++ +|+||+|+|. ..+.+++
T Consensus 7 ~~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~~~~~~a~~~G~~~~~~~~e~~~~a~~~aDlVilavP~-~~~~~vl 85 (341)
T 3ktd_A 7 ISRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSRSGAKSAVDEGFDVSADLEATLQRAAAEDALIVLAVPM-TAIDSLL 85 (341)
T ss_dssp CSSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHTTCCEESCHHHHHHHHHHTTCEEEECSCH-HHHHHHH
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeeeCCHHHHHHhcccCCCEEEEeCCH-HHHHHHH
Confidence 4578999999999999999999999999999999999999888888877888887754 7999999995 5788888
Q ss_pred cCCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCceEEe-CCCCCChH-H-------HhcCceE
Q 018506 120 NGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLD-APVSGGVL-A-------AEAGTLT 190 (355)
Q Consensus 120 ~~~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~-~pv~g~~~-~-------~~~g~~~ 190 (355)
..+.+. .++.+|+|++++++...+.+.+.+. +..|+. +|+.|+.. . ...+...
T Consensus 86 ~~l~~~------~~~~iv~Dv~Svk~~i~~~~~~~~~------------~~~~v~~HPmaG~e~sG~~aa~~~Lf~g~~~ 147 (341)
T 3ktd_A 86 DAVHTH------APNNGFTDVVSVKTAVYDAVKARNM------------QHRYVGSHPMAGTANSGWSASMDGLFKRAVW 147 (341)
T ss_dssp HHHHHH------CTTCCEEECCSCSHHHHHHHHHTTC------------GGGEECEEECCSCC-CCGGGCCSSTTTTCEE
T ss_pred HHHHcc------CCCCEEEEcCCCChHHHHHHHHhCC------------CCcEecCCccccccccchhhhhhHHhcCCeE
Confidence 665432 1457999999999876666655431 134555 78887541 1 1245567
Q ss_pred EEecC---CHH--------HHHHHHHHHHHcCCCeEEeCCcchHHHHHHHHHHHHHHH
Q 018506 191 FMVGG---SED--------AYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVS 237 (355)
Q Consensus 191 ~~~gg---~~~--------~~~~v~~ll~~~g~~~~~~g~~g~a~~~Kl~~n~~~~~~ 237 (355)
+++.+ +++ .++.++++++.+|.+++++++......+.++..+...+.
T Consensus 148 iltp~~~~~~e~~~~~~~~~~~~v~~l~~~~Ga~v~~~~~~~HD~~~A~vshlPh~ia 205 (341)
T 3ktd_A 148 VVTFDQLFDGTDINSTWISIWKDVVQMALAVGAEVVPSRVGPHDAAAARVSHLTHILA 205 (341)
T ss_dssp EECCGGGTSSCCCCHHHHHHHHHHHHHHHHTTCEEEECCHHHHHHHHHHHTHHHHHHH
T ss_pred EEEeCCCCChhhhccchHHHHHHHHHHHHHcCCEEEEeCHHHHHHHHHHHhHHHHHHH
Confidence 77754 456 889999999999999999998778888888877765443
No 74
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=99.76 E-value=1.6e-19 Score=165.80 Aligned_cols=259 Identities=14% Similarity=0.107 Sum_probs=166.0
Q ss_pred CceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCC---CCCCHHHHh-hcCCEEEEeCCCchHHHHHhc
Q 018506 45 FESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVP---TKETPFEVA-EASDVVITMLPSSSHVLDVYN 120 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~---~~~s~~e~~-~~aDiVi~~v~~~~~~~~vl~ 120 (355)
+|||+|||+|.||+.++..|.++|++|++|+|+++.++.....|.. ...++.+.+ +.+|+||+|+|. .++++++.
T Consensus 2 ~mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~D~vilavk~-~~~~~~l~ 80 (294)
T 3g17_A 2 SLSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHAKTITYYTVPHAPAQDIVVKGYEDVTNTFDVIIIAVKT-HQLDAVIP 80 (294)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSCEEEEEESSTTSCCEEEEEEEGGGCCSCEEEEEECSCG-GGHHHHGG
T ss_pred CcEEEEECCCHHHHHHHHHHHHCCCeEEEEEeccCcEEEEecCCeeccceecCchHhcCCCCCEEEEeCCc-cCHHHHHH
Confidence 4899999999999999999999999999999997654432223321 122444544 789999999996 48889888
Q ss_pred CCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCceEEeCCCCCChHHHhcCceEEEecCCHHHH
Q 018506 121 GPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAY 200 (355)
Q Consensus 121 ~~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~pv~g~~~~~~~g~~~~~~gg~~~~~ 200 (355)
.+.+.+. ++++||.+.++...... ++...+. . +..+..+-..++. ....+...+.. ++.+..
T Consensus 81 ~l~~~l~-----~~~~iv~~~nGi~~~~~-----~~~~~v~--~----g~~~~~a~~~~pg-~v~~~~~~~~~-~~~~~~ 142 (294)
T 3g17_A 81 HLTYLAH-----EDTLIILAQNGYGQLEH-----IPFKNVC--Q----AVVYISGQKKGDV-VTHFRDYQLRI-QDNALT 142 (294)
T ss_dssp GHHHHEE-----EEEEEEECCSSCCCGGG-----CCCSCEE--E----CEEEEEEEEETTE-EEEEEEEEEEE-ECSHHH
T ss_pred HHHHhhC-----CCCEEEEeccCcccHhh-----CCCCcEE--E----EEEEEEEEEcCCC-EEEECCCEEec-CccHHH
Confidence 7766653 34577777776533211 2221100 0 1111111111110 00111112222 455677
Q ss_pred HHHHHHHHHcCCCeEEeCCcchHHHHHHHHHHHHH--------------------HHHHHHHHHHHHHHHcCCC--HHHH
Q 018506 201 QAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMA--------------------VSMLGVSEALTLGQSLGIS--ASTL 258 (355)
Q Consensus 201 ~~v~~ll~~~g~~~~~~g~~g~a~~~Kl~~n~~~~--------------------~~~~~~~Ea~~la~~~Gi~--~~~~ 258 (355)
+.+.++|+.-+.++.+..++-...|.|++.|...+ .+..++.|+.+++++.|++ .+.+
T Consensus 143 ~~l~~~l~~~~~~~~~~~di~~~~w~Kl~~N~~inl~al~~~~~g~~l~~~~~~~l~~~~~~E~~~va~a~G~~l~~~~~ 222 (294)
T 3g17_A 143 RQFRDLVQDSQIDIVLEANIQQAIWYKLLVNLGINSITALGRQTVAIMHNPEIRILCRQLLLDGCRVAQAEGLNFSEQTV 222 (294)
T ss_dssp HHHHHHTTTSSCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTSCGGGGGSHHHHHHHHHHHHHHHHHHHHTTCCCCHHHH
T ss_pred HHHHHHHHhCCCceEEChHHHHHHHHHHHHHHHHHHHHHHCCChHHHHcCHHHHHHHHHHHHHHHHHHHHcCCCCCHHHH
Confidence 88999999888888888899999999999998433 2456778999999999975 4444
Q ss_pred HHHHHhcCCCcccccCCCCCCCcccCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHC
Q 018506 259 TKILNSSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCEN 334 (355)
Q Consensus 259 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~gv~~pi~~~~~~~~~~~~~~ 334 (355)
.+.+........ ...-++..++..|++.+-++. .+++++.++++|+++|+++.++++++..++.
T Consensus 223 ~~~~~~~~~~~~-~~~sSM~qD~~~gr~tEid~i-----------~G~vv~~a~~~gv~~P~~~~l~~ll~~~e~~ 286 (294)
T 3g17_A 223 DTIMTIYQGYPD-EMGTSMYYDIVHQQPLEVEAI-----------QGFIYRRAREHNLDTPYLDTIYSFLRAYQQN 286 (294)
T ss_dssp HHHHHHHHTSCT-TCCCHHHHHHHTTCCCSGGGT-----------HHHHHHHHHHTTCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhcCC-CCCCcHHHHHHcCCCccHHHh-----------hhHHHHHHHHhCCCCChHHHHHHHHHHHHhc
Confidence 444432111000 000112233444555555554 3489999999999999999999999877765
No 75
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=99.76 E-value=1.1e-18 Score=177.75 Aligned_cols=189 Identities=19% Similarity=0.233 Sum_probs=130.8
Q ss_pred CCCCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHH-----------HhCC-------------CCCCCCHHH
Q 018506 42 SCQFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMF-----------SDMG-------------VPTKETPFE 97 (355)
Q Consensus 42 ~~~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l-----------~~~g-------------~~~~~s~~e 97 (355)
....+||+|||+|.||.+||..|+++||+|++||+++++++.. .+.| +..++++ +
T Consensus 311 ~~~i~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~-~ 389 (715)
T 1wdk_A 311 AKDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSY-G 389 (715)
T ss_dssp CCCCSSEEEECCHHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEEESSS-T
T ss_pred cccCCEEEEECCChhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcCeEEECCH-H
Confidence 3457899999999999999999999999999999999987653 2233 2345566 6
Q ss_pred HhhcCCEEEEeCCCchHHHH-HhcCCCccccCCCCCCCeEEEE-cCCCCHHHHHHHHHHHhhchhhhccCCCCCceEEeC
Q 018506 98 VAEASDVVITMLPSSSHVLD-VYNGPNGLLQGGNSVRPQLLID-SSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDA 175 (355)
Q Consensus 98 ~~~~aDiVi~~v~~~~~~~~-vl~~~~~~l~~~~~~~~~ivi~-~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~ 175 (355)
++++||+||+|||++.+++. ++.++.+.++ +++++++ +|+.++. .+.+.+.. ...+.+.||++
T Consensus 390 ~~~~aDlVIeaV~e~~~vk~~v~~~l~~~~~-----~~~IlasntStl~i~---~la~~~~~------~~~~ig~hf~~- 454 (715)
T 1wdk_A 390 DFGNVDLVVEAVVENPKVKQAVLAEVENHVR-----EDAILASNTSTISIS---LLAKALKR------PENFVGMHFFN- 454 (715)
T ss_dssp TGGGCSEEEECCCSCHHHHHHHHHHHHTTSC-----TTCEEEECCSSSCHH---HHGGGCSC------GGGEEEEECCS-
T ss_pred HHCCCCEEEEcCCCCHHHHHHHHHHHHhhCC-----CCeEEEeCCCCCCHH---HHHHHhcC------ccceEEEEccC-
Confidence 78899999999998876654 4444333332 4567664 4555443 23332211 00112367776
Q ss_pred CCCCChHHHhcCceE-EEecC--CHHHHHHHHHHHHHcCCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Q 018506 176 PVSGGVLAAEAGTLT-FMVGG--SEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLG 252 (355)
Q Consensus 176 pv~g~~~~~~~g~~~-~~~gg--~~~~~~~v~~ll~~~g~~~~~~g~~g~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~G 252 (355)
|+.. ..+. ++.|. ++++++.+.++++.+|+.++++++. .+. ++|+++. ..++|++.++++ |
T Consensus 455 P~~~-------~~lvevv~g~~t~~e~~~~~~~l~~~lGk~~v~v~d~-~Gf---i~Nril~----~~~~Ea~~l~~~-G 518 (715)
T 1wdk_A 455 PVHM-------MPLVEVIRGEKSSDLAVATTVAYAKKMGKNPIVVNDC-PGF---LVNRVLF----PYFGGFAKLVSA-G 518 (715)
T ss_dssp STTT-------CCEEEEEECSSCCHHHHHHHHHHHHHTTCEEEEEESC-TTT---THHHHHH----HHHHHHHHHHHT-T
T ss_pred Cccc-------CceEEEEECCCCCHHHHHHHHHHHHHhCCEeEEEcCC-CCh---hhhHHHH----HHHHHHHHHHHC-C
Confidence 3321 2233 34443 8999999999999999999999873 222 3444443 357899999997 9
Q ss_pred CCHHHHHHHH
Q 018506 253 ISASTLTKIL 262 (355)
Q Consensus 253 i~~~~~~~~~ 262 (355)
++++++.+++
T Consensus 519 ~~~~~id~~~ 528 (715)
T 1wdk_A 519 VDFVRIDKVM 528 (715)
T ss_dssp CCHHHHHHHH
T ss_pred CCHHHHHHHH
Confidence 9999999998
No 76
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=99.75 E-value=6e-18 Score=172.45 Aligned_cols=252 Identities=15% Similarity=0.140 Sum_probs=145.3
Q ss_pred CCCCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHh-----------CC-------------CCCCCCHHH
Q 018506 42 SCQFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSD-----------MG-------------VPTKETPFE 97 (355)
Q Consensus 42 ~~~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~-----------~g-------------~~~~~s~~e 97 (355)
...++||+|||+|.||+.||..|+++||+|++||+++++++...+ .| +..++++ +
T Consensus 309 ~~~~~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~-~ 387 (725)
T 2wtb_A 309 PRKIKKVAIIGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSLDY-E 387 (725)
T ss_dssp CCCCCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEESSS-G
T ss_pred cccCcEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEeCCH-H
Confidence 345689999999999999999999999999999999998765421 22 2234566 5
Q ss_pred HhhcCCEEEEeCCCchHHHH-HhcCCCccccCCCCCCCeEEEE-cCCCCHHHHHHHHHHHhhchhhhccCCCCCceEEeC
Q 018506 98 VAEASDVVITMLPSSSHVLD-VYNGPNGLLQGGNSVRPQLLID-SSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDA 175 (355)
Q Consensus 98 ~~~~aDiVi~~v~~~~~~~~-vl~~~~~~l~~~~~~~~~ivi~-~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~ 175 (355)
++++||+||+|||++..++. ++.++.+.++ ++.++++ +|+.++.+ +.+.+. ....+.+.||++
T Consensus 388 ~~~~aDlVIeaVpe~~~vk~~v~~~l~~~~~-----~~~IlasntStl~i~~---la~~~~------~p~~~iG~hf~~- 452 (725)
T 2wtb_A 388 SFRDVDMVIEAVIENISLKQQIFADLEKYCP-----QHCILASNTSTIDLNK---IGERTK------SQDRIVGAHFFS- 452 (725)
T ss_dssp GGTTCSEEEECCCSCHHHHHHHHHHHHHHSC-----TTCEEEECCSSSCHHH---HTTTCS------CTTTEEEEEECS-
T ss_pred HHCCCCEEEEcCcCCHHHHHHHHHHHHhhCC-----CCcEEEeCCCCCCHHH---HHHHhc------CCCCEEEecCCC-
Confidence 77899999999999876654 4444333432 4456654 45554442 333221 111112367877
Q ss_pred CCCCChHHHhcCceEEEecC---CHHHHHHHHHHHHHcCCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Q 018506 176 PVSGGVLAAEAGTLTFMVGG---SEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLG 252 (355)
Q Consensus 176 pv~g~~~~~~~g~~~~~~gg---~~~~~~~v~~ll~~~g~~~~~~g~~g~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~G 252 (355)
|+.. ..+..++.| ++++++.+.++++.+|+.++++++. .+. ++|+++. ..++|++.++++ |
T Consensus 453 P~~~-------~~lvevv~g~~t~~e~~~~~~~l~~~lGk~~v~v~d~-~Gf---i~Nril~----~~~~Ea~~l~~~-G 516 (725)
T 2wtb_A 453 PAHI-------MPLLEIVRTNHTSAQVIVDLLDVGKKIKKTPVVVGNC-TGF---AVNRMFF----PYTQAAMFLVEC-G 516 (725)
T ss_dssp STTT-------CCEEEEEECSSCCHHHHHHHHHHHHHTTCEEEEEESS-TTT---THHHHHH----HHHHHHHHHHHT-T
T ss_pred Cccc-------CceEEEEECCCCCHHHHHHHHHHHHHhCCEEEEECCC-ccH---HHHHHHH----HHHHHHHHHHHC-C
Confidence 3322 223444443 8999999999999999999999873 222 3444443 347999999988 9
Q ss_pred CCHHHHHHHHHhcCCCcccccCCCCCCCcccCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHH
Q 018506 253 ISASTLTKILNSSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLC 332 (355)
Q Consensus 253 i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~gv~~pi~~~~~~~~~~~~ 332 (355)
++++++.+++ .+.+.. + .|. .++ |+ .+++...+-...+.+...+.....|+++...+.-..+.
T Consensus 517 ~~~e~id~~~-~~~g~p-~----Gp~-~l~-------D~---vGld~~~~i~~~~~~~~~~~~~~~~~l~~~v~~g~lG~ 579 (725)
T 2wtb_A 517 ADPYLIDRAI-SKFGMP-M----GPF-RLC-------DL---VGFGVAIATATQFIENFSERTYKSMIIPLMQEDKRAGE 579 (725)
T ss_dssp CCHHHHHHHH-HHHTCS-S----CHH-HHH-------HH---HCHHHHHHHHHHHHHHSGGGCCCCTHHHHHHTTC----
T ss_pred CCHHHHHHHH-HHcCCC-C----CHH-HHH-------HH---hchHHHHHHHHHHHHhcCCccCChHHHHHHHHCCCcee
Confidence 9999999999 443211 0 000 000 10 12232222222222221222122267777776667777
Q ss_pred HCCCCCCcHH
Q 018506 333 ENGHDSKDFS 342 (355)
Q Consensus 333 ~~g~g~~d~~ 342 (355)
+.|.|..+|.
T Consensus 580 k~g~GfY~y~ 589 (725)
T 2wtb_A 580 ATRKGFYLYD 589 (725)
T ss_dssp ----------
T ss_pred cCCceeEeCC
Confidence 8888888883
No 77
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=99.74 E-value=3.3e-18 Score=161.02 Aligned_cols=270 Identities=15% Similarity=0.090 Sum_probs=170.0
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCC--------cEEEEeCChhH-----HHHHHhC--------------CCCCCCCHH
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGY--------KMAVHDVNCNV-----MKMFSDM--------------GVPTKETPF 96 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~--------~V~v~dr~~~~-----~~~l~~~--------------g~~~~~s~~ 96 (355)
+..||+|||+|.||++||..|+++|| +|.+|.|+++. .+.++.. ++.+++++.
T Consensus 33 ~p~KI~ViGaGsWGTALA~~la~ng~~~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp~~i~~t~dl~ 112 (391)
T 4fgw_A 33 KPFKVTVIGSGNWGTTIAKVVAENCKGYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITLPDNLVANPDLI 112 (391)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHCTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCCCSSEEEESCHH
T ss_pred CCCeEEEECcCHHHHHHHHHHHHcCCCccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcCCCCcEEeCCHH
Confidence 34599999999999999999999876 49999998763 4444432 234567899
Q ss_pred HHhhcCCEEEEeCCCchHHHHHhcCCCccccCCCCCCCeEEEEcCCCCHH-H--HHHHHHHHhhchhhhccCCCCCceEE
Q 018506 97 EVAEASDVVITMLPSSSHVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQ-T--SRNISAAVSNCILKEKKDSWENPVML 173 (355)
Q Consensus 97 e~~~~aDiVi~~v~~~~~~~~vl~~~~~~l~~~~~~~~~ivi~~st~~~~-~--~~~l~~~~~~~~~~~~~g~~~~~~~~ 173 (355)
++++++|+||+++|. +.+++++..+.+.+. ++..+|.++.+... + .+.+.+.+.+. .+ ..+.++
T Consensus 113 ~al~~ad~ii~avPs-~~~r~~l~~l~~~~~-----~~~~iv~~~KGie~~~~~~~~~se~i~e~-----~~--~~~~vL 179 (391)
T 4fgw_A 113 DSVKDVDIIVFNIPH-QFLPRICSQLKGHVD-----SHVRAISCLKGFEVGAKGVQLLSSYITEE-----LG--IQCGAL 179 (391)
T ss_dssp HHHTTCSEEEECSCG-GGHHHHHHHHTTTSC-----TTCEEEECCCSCEEETTEEECHHHHHHHH-----HC--CEEEEE
T ss_pred HHHhcCCEEEEECCh-hhhHHHHHHhccccC-----CCceeEEeccccccccccchhHHHHHHHH-----hC--ccceec
Confidence 999999999999997 699999988776653 45678888776421 1 12233333321 01 015678
Q ss_pred eCCCCCChHHHhcCceEEEecCCHH---------HHHHHHHHHHHcCCCeEEeCC-c--chHHHHH--------------
Q 018506 174 DAPVSGGVLAAEAGTLTFMVGGSED---------AYQAAKPLFLSMGKNTIYCGG-A--GNGAAAK-------------- 227 (355)
Q Consensus 174 ~~pv~g~~~~~~~g~~~~~~gg~~~---------~~~~v~~ll~~~g~~~~~~g~-~--g~a~~~K-------------- 227 (355)
++|.+.........+.+.+.+.+.+ ..+.++.+|..-..+++...+ . .-+-++|
T Consensus 180 sGPs~A~EVa~~~pta~~iA~~~~~~~~~~~~~~~a~~~~~lf~~~~frvy~s~DviGvElgGAlKNViAIAaGi~dGlg 259 (391)
T 4fgw_A 180 SGANIATEVAQEHWSETTVAYHIPKDFRGEGKDVDHKVLKALFHRPYFHVSVIEDVAGISICGALKNVVALGCGFVEGLG 259 (391)
T ss_dssp ECSCCHHHHHTTCCEEEEEECCCCTTCCCSSSSCCHHHHHHHHCBTTEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cCCchHHHhhcCCCceEEEEecChhhhhhhhHHHHHHHHHHHhCCCCEEEEEeCCccceehHHHHHHHHHHHHHHHhcCC
Confidence 8998766555555554455443322 346678888765556665554 2 2233444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHc---CCCHHHHHHHHHhcCC--CcccccCCCCCCCccc---CCCCCC---CCCCCcc
Q 018506 228 ICNNLTMAVSMLGVSEALTLGQSL---GISASTLTKILNSSSA--RCWSSDSYNPVPGVME---GVPASR---NYGGGFA 296 (355)
Q Consensus 228 l~~n~~~~~~~~~~~Ea~~la~~~---Gi~~~~~~~~~~~~~~--~s~~~~~~~~~~~~~~---~~~~~~---~~~~~~~ 296 (355)
+..|...+++...++|+.+++.++ |-++.++..+...|+. ++.. .+++..+..- |+..+. +...| .
T Consensus 260 ~G~NakAALitrGl~Em~rlg~al~~~g~~~tt~~glaGlGDLi~Tc~s--SRNr~~G~~lg~~G~~~~~~~~~~~~g-~ 336 (391)
T 4fgw_A 260 WGNNASAAIQRVGLGEIIRFGQMFFPESREETYYQESAGVADLITTCAG--GRNVKVARLMATSGKDAWECEKELLNG-Q 336 (391)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHSTTTHHHHHHHHHS--SHHHHHHHHHHHTCCCHHHHHHHHHTT-C
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHhcccCCceeecCCCcccceeEEecC--CccHHHHHHHHhcCCCHHHHHHHHhCC-C
Confidence 556888888999999999999998 4444444433232221 1111 2222111110 100000 00001 1
Q ss_pred hhhHHHHHHHHHHHHHHhCC--CChHHHHHHHHHH
Q 018506 297 SKLMAKDLNLALASAKEVGV--DCPLTSQAQDIYA 329 (355)
Q Consensus 297 ~~~~~kd~~~~~~~a~~~gv--~~pi~~~~~~~~~ 329 (355)
+.........+.++++++|+ ++|+++++++++.
T Consensus 337 v~EGv~ta~~v~~l~~~~~v~~emPI~~~vy~IL~ 371 (391)
T 4fgw_A 337 SAQGLITCKEVHEWLETCGSVEDFPLFEAVYQIVY 371 (391)
T ss_dssp CCTHHHHHHHHHHHHHHHTCSTTCHHHHHHHHHHH
T ss_pred EEehHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHh
Confidence 23445566788999999999 8999999999887
No 78
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=99.59 E-value=1.5e-19 Score=156.53 Aligned_cols=168 Identities=14% Similarity=0.148 Sum_probs=119.0
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHHHHhcCCC
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNGPN 123 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl~~~~ 123 (355)
..|||+|||+|+||..++..|.+.|++|++|+|+++ .+.+.+.++... ++.++++.+|+||+++|.. ++++++ .+.
T Consensus 18 ~~~~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~-~~~~~~~g~~~~-~~~~~~~~aDvVilav~~~-~~~~v~-~l~ 93 (201)
T 2yjz_A 18 KQGVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNPQ-VSSLLPRGAEVL-CYSEAASRSDVIVLAVHRE-HYDFLA-ELA 93 (201)
Confidence 458999999999999999999999999999999987 555655566655 7888888999999999974 677765 322
Q ss_pred ccccCCCCCCCeEEEEcCCCCHH------HHHHHHHHHhhchhhhccCCCCCceEEeCCCCCChHHHhcCce-EEEecCC
Q 018506 124 GLLQGGNSVRPQLLIDSSTIDPQ------TSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTL-TFMVGGS 196 (355)
Q Consensus 124 ~~l~~~~~~~~~ivi~~st~~~~------~~~~l~~~~~~~~~~~~~g~~~~~~~~~~pv~g~~~~~~~g~~-~~~~gg~ 196 (355)
.. .++++||+++++.+. ..+.+.+.++... .. ..+.+.|..........+.. .+++|++
T Consensus 94 ~~------~~~~ivI~~~~G~~~~~~~~~~~~~l~~~~~~~~----vv----ra~~n~~a~~~~~g~l~g~~~~~~~g~~ 159 (201)
T 2yjz_A 94 DS------LKGRVLIDVSNNQKMNQYPESNAEYLAQLVPGAH----VV----KAFNTISAWALQSGTLDASRQVFVCGND 159 (201)
Confidence 11 246799999998873 2233444433110 00 11222222211111111222 5777888
Q ss_pred HHHHHHHHHHHHHcCCCeEEeCCcchHHHHHHH
Q 018506 197 EDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKIC 229 (355)
Q Consensus 197 ~~~~~~v~~ll~~~g~~~~~~g~~g~a~~~Kl~ 229 (355)
++.++.++++|+.+|.+++++|+++.+.++|.+
T Consensus 160 ~~~~~~v~~ll~~~G~~~~~~G~l~~a~~~e~~ 192 (201)
T 2yjz_A 160 SKAKDRVMDIARTLGLTPLDQGSLVAAKEIENY 192 (201)
Confidence 899999999999999999999999999999854
No 79
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=99.73 E-value=2.1e-17 Score=144.61 Aligned_cols=173 Identities=16% Similarity=0.199 Sum_probs=120.2
Q ss_pred CCCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHHHHhcCC
Q 018506 43 CQFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNGP 122 (355)
Q Consensus 43 ~~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl~~~ 122 (355)
..+|||+|||+|.||..++..|.+.||+|++|+|++++.+.+.+.|+... +..++++++|+||+|+|. ..+++++. +
T Consensus 26 ~~~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~-~~~~~~~~~DvVi~av~~-~~~~~v~~-l 102 (215)
T 2vns_A 26 DEAPKVGILGSGDFARSLATRLVGSGFKVVVGSRNPKRTARLFPSAAQVT-FQEEAVSSPEVIFVAVFR-EHYSSLCS-L 102 (215)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHSBTTSEEE-EHHHHTTSCSEEEECSCG-GGSGGGGG-G
T ss_pred CCCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcee-cHHHHHhCCCEEEECCCh-HHHHHHHH-H
Confidence 35689999999999999999999999999999999999988877676654 788888999999999995 46666653 2
Q ss_pred CccccCCCCCCCeEEEEcCCCCHHHHHH----HHHHHhhchhhhccCCCCCceEEe--CCCCCChHH--HhcCc-eEEEe
Q 018506 123 NGLLQGGNSVRPQLLIDSSTIDPQTSRN----ISAAVSNCILKEKKDSWENPVMLD--APVSGGVLA--AEAGT-LTFMV 193 (355)
Q Consensus 123 ~~~l~~~~~~~~~ivi~~st~~~~~~~~----l~~~~~~~~~~~~~g~~~~~~~~~--~pv~g~~~~--~~~g~-~~~~~ 193 (355)
.+.+ +++++++++++.+..... ..+.+.+. + .+ .+++. .++.+.... ...+. ..++.
T Consensus 103 ~~~~------~~~~vv~~s~g~~~~~l~~~~~~~~~l~~~-l---~~----~~vv~~~n~~~~~~~~~~~~~g~~~~~~~ 168 (215)
T 2vns_A 103 SDQL------AGKILVDVSNPTEQEHLQHRESNAEYLASL-F---PT----CTVVKAFNVISAWTLQAGPRDGNRQVPIC 168 (215)
T ss_dssp HHHH------TTCEEEECCCCCHHHHHHCSSCHHHHHHHH-C---TT----SEEEEECTTBCHHHHHTCSCSSCCEEEEE
T ss_pred HHhc------CCCEEEEeCCCcccccccccccHHHHHHHH-C---CC----CeEEeccccccHhHhcccccCCceeEEEe
Confidence 2222 457999999998654211 11222110 0 00 11111 122111100 11122 36777
Q ss_pred cCCHHHHHHHHHHHHHcCCCeEEeCCcchHHHHHHHHHH
Q 018506 194 GGSEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNL 232 (355)
Q Consensus 194 gg~~~~~~~v~~ll~~~g~~~~~~g~~g~a~~~Kl~~n~ 232 (355)
|++++.++.++++|+.+|.+++++|+.+.|.+++.+.++
T Consensus 169 g~~~~~~~~v~~ll~~~G~~~~~~g~~~~~~~~e~~~~~ 207 (215)
T 2vns_A 169 GDQPEAKRAVSEMALAMGFMPVDMGSLASAWEVEAMPLR 207 (215)
T ss_dssp ESCHHHHHHHHHHHHHTTCEEEECCSGGGHHHHHHSCCB
T ss_pred cCCHHHHHHHHHHHHHcCCceEeecchhhhhHhhhhhhh
Confidence 889999999999999999999999999999998754443
No 80
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=99.73 E-value=4.5e-18 Score=154.65 Aligned_cols=190 Identities=16% Similarity=0.183 Sum_probs=128.4
Q ss_pred CceEEEEcccHHhHHHHHHHHHCCCcE-EEEeCChhHHHHHHh-CCCCCCCCHHHHhhcCCEEEEeCCCchHHHHHhcCC
Q 018506 45 FESVGFIGLGNMGFRMASNLMKAGYKM-AVHDVNCNVMKMFSD-MGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNGP 122 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~~G~~V-~v~dr~~~~~~~l~~-~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl~~~ 122 (355)
+|||+|||+|+||.+|+..|.++ ++| .+|||++++.+.+.+ .+. .+.+++++++++|+||+|+|+. .+++++..+
T Consensus 2 ~m~I~iIG~G~mG~~la~~l~~~-~~v~~v~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~DvVilav~~~-~~~~v~~~l 78 (276)
T 2i76_A 2 SLVLNFVGTGTLTRFFLECLKDR-YEIGYILSRSIDRARNLAEVYGG-KAATLEKHPELNGVVFVIVPDR-YIKTVANHL 78 (276)
T ss_dssp --CCEEESCCHHHHHHHHTTC-----CCCEECSSHHHHHHHHHHTCC-CCCSSCCCCC---CEEECSCTT-THHHHHTTT
T ss_pred CceEEEEeCCHHHHHHHHHHHHc-CcEEEEEeCCHHHHHHHHHHcCC-ccCCHHHHHhcCCEEEEeCChH-HHHHHHHHh
Confidence 47999999999999999999998 999 599999999988864 466 6677888888999999999986 578887664
Q ss_pred CccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCceEEeCCCCCChHHHh-cCceEEEecCCHHHHH
Q 018506 123 NGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAE-AGTLTFMVGGSEDAYQ 201 (355)
Q Consensus 123 ~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~pv~g~~~~~~-~g~~~~~~gg~~~~~~ 201 (355)
. .++++|+++++..+... +.+. .. +..++..++.+++.... .....++++++++.++
T Consensus 79 ~--------~~~~ivi~~s~~~~~~~--l~~~--------~~----~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 136 (276)
T 2i76_A 79 N--------LGDAVLVHCSGFLSSEI--FKKS--------GR----ASIHPNFSFSSLEKALEMKDQIVFGLEGDERGLP 136 (276)
T ss_dssp C--------CSSCCEEECCSSSCGGG--GCSS--------SE----EEEEECSCC--CTTGGGCGGGCCEEECCCTTTHH
T ss_pred c--------cCCCEEEECCCCCcHHH--HHHh--------hc----cccchhhhcCCCchhHHHhCCCeEEEEeChHHHH
Confidence 3 14568999987765532 1111 00 12344556666444333 3444567777888899
Q ss_pred HHHHHHHHcCCCeEEeCCcch---HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH--HHHHHHH
Q 018506 202 AAKPLFLSMGKNTIYCGGAGN---GAAAKICNNLTMAVSMLGVSEALTLGQSLGISAS--TLTKILN 263 (355)
Q Consensus 202 ~v~~ll~~~g~~~~~~g~~g~---a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gi~~~--~~~~~~~ 263 (355)
.++++++.+|.+++++++... ....+++.|.+.. .+.|+..++.+.|++.+ .+.+++.
T Consensus 137 ~~~~l~~~lG~~~~~v~~~~~~~~~~~~~l~~n~~~~----~~~~a~~~~~~~Gl~~~~a~~~~l~~ 199 (276)
T 2i76_A 137 IVKKIAEEISGKYFVIPSEKKKAYHLAAVIASNFPVA----LAYLSKRIYTLLGLDEPELLIHTLMK 199 (276)
T ss_dssp HHHHHHHHHCSCEEECCGGGHHHHHHHHHHHHTTHHH----HHHHHHHHHHTTTCSCHHHHHHHHHH
T ss_pred HHHHHHHHhCCCEEEECHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 999999999988999986432 2344677775543 45788889999999987 4444443
No 81
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=99.72 E-value=4.6e-17 Score=148.94 Aligned_cols=162 Identities=17% Similarity=0.231 Sum_probs=120.1
Q ss_pred CCCceEEEEcccHHhHHHHHHHHHC--CCcEEEEeCChhHHHHHHhCCCC--CCCCHHHHhhcCCEEEEeCCCchHHHHH
Q 018506 43 CQFESVGFIGLGNMGFRMASNLMKA--GYKMAVHDVNCNVMKMFSDMGVP--TKETPFEVAEASDVVITMLPSSSHVLDV 118 (355)
Q Consensus 43 ~~~mkIgiIG~G~mG~~ia~~L~~~--G~~V~v~dr~~~~~~~l~~~g~~--~~~s~~e~~~~aDiVi~~v~~~~~~~~v 118 (355)
|++|||+|||+|+||.+++..|.++ |++|++|||++++.+.+.+.|.. .+.++.++++++|+||+|+|.. .++++
T Consensus 4 M~~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~aDvVilavp~~-~~~~v 82 (290)
T 3b1f_A 4 MEEKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGIVDEATADFKVFAALADVIILAVPIK-KTIDF 82 (290)
T ss_dssp GCCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTSCSEEESCTTTTGGGCSEEEECSCHH-HHHHH
T ss_pred cccceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCCcccccCCHHHhhcCCCEEEEcCCHH-HHHHH
Confidence 4568999999999999999999988 67999999999999888877763 4567888889999999999965 66787
Q ss_pred hcCCCcc-ccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCceEEe-CCCCC----ChHHHh----cCc
Q 018506 119 YNGPNGL-LQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLD-APVSG----GVLAAE----AGT 188 (355)
Q Consensus 119 l~~~~~~-l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~-~pv~g----~~~~~~----~g~ 188 (355)
+..+.+. +. ++++|++++++.+...+.+.+.++. . +.+++. .|++| ++..+. .+.
T Consensus 83 ~~~l~~~~l~-----~~~ivi~~~~~~~~~~~~l~~~l~~-----~-----~~~~v~~~P~~g~~~~g~~~a~~~l~~g~ 147 (290)
T 3b1f_A 83 IKILADLDLK-----EDVIITDAGSTKYEIVRAAEYYLKD-----K-----PVQFVGSHPMAGSHKSGAVAANVNLFENA 147 (290)
T ss_dssp HHHHHTSCCC-----TTCEEECCCSCHHHHHHHHHHHHTT-----S-----SCEEEEEEEC-----CCTTSCCTTTTTTS
T ss_pred HHHHHhcCCC-----CCCEEEECCCCchHHHHHHHHhccc-----c-----CCEEEEeCCcCCCCcchHHHhhHHHhCCC
Confidence 7654433 32 4579999988887666667666542 0 144444 67754 232222 455
Q ss_pred eEEEe---cCCHHHHHHHHHHHHHcCCCeEEeCCc
Q 018506 189 LTFMV---GGSEDAYQAAKPLFLSMGKNTIYCGGA 220 (355)
Q Consensus 189 ~~~~~---gg~~~~~~~v~~ll~~~g~~~~~~g~~ 220 (355)
.++++ +++++..+.++++|+.+|.+++++++.
T Consensus 148 ~~~~~~~~~~~~~~~~~v~~l~~~~G~~~~~~~~~ 182 (290)
T 3b1f_A 148 YYIFSPSCLTKPNTIPALQDLLSGLHARYVEIDAA 182 (290)
T ss_dssp EEEEEECTTCCTTHHHHHHHHTGGGCCEEEECCHH
T ss_pred eEEEecCCCCCHHHHHHHHHHHHHcCCEEEEcCHH
Confidence 44444 467889999999999999988888763
No 82
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=99.72 E-value=9e-19 Score=161.67 Aligned_cols=259 Identities=11% Similarity=0.017 Sum_probs=155.3
Q ss_pred CceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCC----------HHHHhhcCCEEEEeCCCchH
Q 018506 45 FESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKET----------PFEVAEASDVVITMLPSSSH 114 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s----------~~e~~~~aDiVi~~v~~~~~ 114 (355)
+|||+|||+|.||+.++..|+ +|++|++|+|++++++.+++.|.....+ ..+....+|+||+|+|. .+
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~D~vilavK~-~~ 79 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQEQAAAIQSEGIRLYKGGEEFRADCSADTSINSDFDLLVVTVKQ-HQ 79 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCEEESSCCSCCSEEEECCCG-GG
T ss_pred CCEEEEECCCHHHHHHHHHHh-cCCceEEEECCHHHHHHHHhCCceEecCCCeecccccccccccCCCCEEEEEeCH-HH
Confidence 489999999999999999999 9999999999999888888766433211 12345689999999996 48
Q ss_pred HHHHhcCCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCceEEeCCCCCChHHHhcCceEEEec
Q 018506 115 VLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVG 194 (355)
Q Consensus 115 ~~~vl~~~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~pv~g~~~~~~~g~~~~~~g 194 (355)
+++++..+.++ .+++ ||.+.++.... +.+.+.++...+. .|..........| |.......+. +.+|
T Consensus 80 ~~~~l~~l~~~------~~~~-ivs~~nGi~~~-e~l~~~~~~~~vl--~g~~~~~a~~~~p--g~v~~~~~g~--~~iG 145 (307)
T 3ego_A 80 LQSVFSSLERI------GKTN-ILFLQNGMGHI-HDLKDWHVGHSIY--VGIVEHGAVRKSD--TAVDHTGLGA--IKWS 145 (307)
T ss_dssp HHHHHHHTTSS------CCCE-EEECCSSSHHH-HHHHTCCCSCEEE--EEEECCEEEECSS--SEEEEEECCC--EEEE
T ss_pred HHHHHHHhhcC------CCCe-EEEecCCccHH-HHHHHhCCCCcEE--EEEEeeceEECCC--CEEEEeeeee--EEEE
Confidence 88888765443 1345 77777766532 3344433321100 0000000011111 1111122233 2233
Q ss_pred ---CCHHHHHHHHHHHHHcCCCeEEeCCcchHHHHHHHHHHHHHH---------------------HHHHHHHHHHHHHH
Q 018506 195 ---GSEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAV---------------------SMLGVSEALTLGQS 250 (355)
Q Consensus 195 ---g~~~~~~~v~~ll~~~g~~~~~~g~~g~a~~~Kl~~n~~~~~---------------------~~~~~~Ea~~la~~ 250 (355)
+..+.++.+.++|+..+.++.+..++-...|.|++.|...+. +..++.|+..++.+
T Consensus 146 ~~~~~~~~~~~l~~~l~~ag~~~~~~~di~~~~W~Kl~~N~~~N~ltal~~~~~g~l~~~~~~~~l~~~l~~E~~~va~~ 225 (307)
T 3ego_A 146 AFDDAEPDRLNILFQHNHSDFPIYYETDWYRLLTGKLIVNACINPLTALLQVKNGELLTTPAYLAFMKLVFQEACRILKL 225 (307)
T ss_dssp ECTTCCGGGGTTTTSSCCTTSCEEECSCHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHSHHHHHHHHHHHHHHHHHHTC
T ss_pred eCCCCcHHHHHHHHHhhhCCCCcEechhHHHHHHHHHHHhhhhhHHHHHhcCCcchhhcChhHHHHHHHHHHHHHHHHhc
Confidence 223344555555666677777888899999999999986542 34567788888765
Q ss_pred cCCCHHHHHHHHHhcC-CCcccccCCCCCCCcccCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhCCCChHHHHHHHHHH
Q 018506 251 LGISASTLTKILNSSS-ARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYA 329 (355)
Q Consensus 251 ~Gi~~~~~~~~~~~~~-~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~gv~~pi~~~~~~~~~ 329 (355)
. +++.+.+.+.... .... ..-++..++..|++.+-|+. .+++++.++++|+++|+++.++++++
T Consensus 226 ~--~~~~~~~~~~~~~~~~~~--~~sSM~qD~~~gr~tEid~i-----------~G~vv~~a~~~gv~tP~~~~l~~li~ 290 (307)
T 3ego_A 226 E--NEEKAWERVQAVCGQTKE--NRSSMLVDVIGGRQTEADAI-----------IGYLLKEASLQGLDAVHLEFLYGSIK 290 (307)
T ss_dssp S--CHHHHHHHHHHHHHHTTT--CCCHHHHHHHHTCCCSHHHH-----------HHHHHHHHHHTTCCCHHHHHHHHHHH
T ss_pred c--ChHHHHHHHHHHHHhcCC--CCchHHHHHHcCCcccHHHh-----------hhHHHHHHHHcCCCCcHHHHHHHHHH
Confidence 4 2444433332110 0000 00011222333433333332 35899999999999999999999998
Q ss_pred HHHHC
Q 018506 330 KLCEN 334 (355)
Q Consensus 330 ~~~~~ 334 (355)
..++.
T Consensus 291 ~~e~~ 295 (307)
T 3ego_A 291 ALERN 295 (307)
T ss_dssp HTC--
T ss_pred HHHhh
Confidence 76554
No 83
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=99.72 E-value=9.9e-18 Score=146.07 Aligned_cols=157 Identities=15% Similarity=0.174 Sum_probs=112.1
Q ss_pred CCCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHHHHhcCC
Q 018506 43 CQFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNGP 122 (355)
Q Consensus 43 ~~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl~~~ 122 (355)
..+|||+|||+|.||++++..|.++|++|++|||+++ +++++|+||+|+| +.++++++..+
T Consensus 17 ~~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~------------------~~~~aD~vi~av~-~~~~~~v~~~l 77 (209)
T 2raf_A 17 FQGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ------------------ATTLGEIVIMAVP-YPALAALAKQY 77 (209)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC------------------CSSCCSEEEECSC-HHHHHHHHHHT
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH------------------HhccCCEEEEcCC-cHHHHHHHHHH
Confidence 3568999999999999999999999999999999865 4568999999999 56888888765
Q ss_pred CccccCCCCCCCeEEEEcCCCCH--H-------H----HHHHHHHHhhchhhhccCCCCCceEEe------CCCCCChHH
Q 018506 123 NGLLQGGNSVRPQLLIDSSTIDP--Q-------T----SRNISAAVSNCILKEKKDSWENPVMLD------APVSGGVLA 183 (355)
Q Consensus 123 ~~~l~~~~~~~~~ivi~~st~~~--~-------~----~~~l~~~~~~~~~~~~~g~~~~~~~~~------~pv~g~~~~ 183 (355)
.+.+ ++++++++++..+ . . .+.+.+.++. ..++. +|.++....
T Consensus 78 ~~~~------~~~~vi~~~~g~~~~~~~~l~~~~~~~~~~~l~~~l~~------------~~vv~~~~~~~~p~~~~~~~ 139 (209)
T 2raf_A 78 ATQL------KGKIVVDITNPLNFDTWDDLVVPADSSAAQELQQQLPD------------SQVLKAFNTTFAATLQSGQV 139 (209)
T ss_dssp HHHH------TTSEEEECCCCBCTTTSSSBSSCTTCCHHHHHHHHCTT------------SEEEECSTTSCHHHHHHSEE
T ss_pred HHhc------CCCEEEEECCCCCccccccccCCCCCcHHHHHHHHCCC------------CcEEEeeecccHhhcccccc
Confidence 4443 2569999988543 1 1 3444444321 34444 232211111
Q ss_pred HhcCceEEEecC-CHHHHHHHHHHHHHcCCCeEEeCCcchHHHHHHHHHHHHHH
Q 018506 184 AEAGTLTFMVGG-SEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAV 236 (355)
Q Consensus 184 ~~~g~~~~~~gg-~~~~~~~v~~ll~~~g~~~~~~g~~g~a~~~Kl~~n~~~~~ 236 (355)
...+...+++++ +++..+.++++|+.+|.+++++++++.+.++|++.|++...
T Consensus 140 ~g~~~~~~~~~g~~~~~~~~v~~ll~~~G~~~~~~~~i~~a~~~K~i~~l~~~~ 193 (209)
T 2raf_A 140 NGKEPTTVLVAGNDDSAKQRFTRALADSPLEVKDAGKLKRARELEAMGFMQMTL 193 (209)
T ss_dssp TTTEECEEEEEESCHHHHHHHHHHTTTSSCEEEEEESGGGHHHHHHHHHHHHHH
T ss_pred CCCCCceeEEcCCCHHHHHHHHHHHHHcCCceEeCCCHhHHHHhcchHHHHHHH
Confidence 111233445554 57899999999999999999999999999999998886443
No 84
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=99.69 E-value=2e-16 Score=153.80 Aligned_cols=191 Identities=16% Similarity=0.220 Sum_probs=129.0
Q ss_pred CCCCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHh-----------CC-----------CCCCCCHHHHh
Q 018506 42 SCQFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSD-----------MG-----------VPTKETPFEVA 99 (355)
Q Consensus 42 ~~~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~-----------~g-----------~~~~~s~~e~~ 99 (355)
.+.++||+|||+|.||..||..|+++||+|++||+++++++...+ .| ...++++ +.+
T Consensus 34 ~~~~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~-~~~ 112 (463)
T 1zcj_A 34 AQPVSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSST-KEL 112 (463)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCG-GGG
T ss_pred cCCCCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCH-HHH
Confidence 345789999999999999999999999999999999987765432 11 1234566 567
Q ss_pred hcCCEEEEeCCCchHHH-HHhcCCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCceEEeCCCC
Q 018506 100 EASDVVITMLPSSSHVL-DVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVS 178 (355)
Q Consensus 100 ~~aDiVi~~v~~~~~~~-~vl~~~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~pv~ 178 (355)
++||+||+|+|+..+++ +++..+.+.+. ++++|++ +|..+... .+.+.+.. ...+.+.||+ .|+.
T Consensus 113 ~~aDlVIeaVpe~~~~k~~v~~~l~~~~~-----~~~ii~s-nTs~~~~~-~la~~~~~------~~~~ig~hf~-~P~~ 178 (463)
T 1zcj_A 113 STVDLVVEAVFEDMNLKKKVFAELSALCK-----PGAFLCT-NTSALNVD-DIASSTDR------PQLVIGTHFF-SPAH 178 (463)
T ss_dssp TTCSEEEECCCSCHHHHHHHHHHHHHHSC-----TTCEEEE-CCSSSCHH-HHHTTSSC------GGGEEEEEEC-SSTT
T ss_pred CCCCEEEEcCCCCHHHHHHHHHHHHhhCC-----CCeEEEe-CCCCcCHH-HHHHHhcC------CcceEEeecC-CCcc
Confidence 89999999999875544 45544433432 4567765 44444332 45443321 1111136776 4432
Q ss_pred CChHHHhcCceE-EEec--CCHHHHHHHHHHHHHcCCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Q 018506 179 GGVLAAEAGTLT-FMVG--GSEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISA 255 (355)
Q Consensus 179 g~~~~~~~g~~~-~~~g--g~~~~~~~v~~ll~~~g~~~~~~g~~g~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gi~~ 255 (355)
. ..+. ++.| .++++++.++++++.+|+.++++++. .+. +.|.+... .++|++.++++ |+++
T Consensus 179 ~-------~~lvevv~g~~t~~e~~~~~~~l~~~lGk~~v~v~~~-~gf----i~Nrll~~---~~~ea~~l~~~-G~~~ 242 (463)
T 1zcj_A 179 V-------MRLLEVIPSRYSSPTTIATVMSLSKKIGKIGVVVGNC-YGF----VGNRMLAP---YYNQGFFLLEE-GSKP 242 (463)
T ss_dssp T-------CCEEEEEECSSCCHHHHHHHHHHHHHTTCEEEEBCCS-TTT----THHHHHHH---HHHHHHHHHHT-TCCH
T ss_pred c-------ceeEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEECCC-ccH----HHHHHHHH---HHHHHHHHHHc-CCCH
Confidence 1 2233 3443 48999999999999999999999872 222 33443333 35899999877 8999
Q ss_pred HHHHHHHH
Q 018506 256 STLTKILN 263 (355)
Q Consensus 256 ~~~~~~~~ 263 (355)
+++.+++.
T Consensus 243 ~~id~~~~ 250 (463)
T 1zcj_A 243 EDVDGVLE 250 (463)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999986
No 85
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=99.66 E-value=3e-16 Score=144.20 Aligned_cols=200 Identities=15% Similarity=0.157 Sum_probs=137.9
Q ss_pred CCCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHH-----------HhCC--------------CCCCCCHHH
Q 018506 43 CQFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMF-----------SDMG--------------VPTKETPFE 97 (355)
Q Consensus 43 ~~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l-----------~~~g--------------~~~~~s~~e 97 (355)
....||+|||+|.||+.||..++.+|++|++||++++.++.. .+.| +..+++..+
T Consensus 4 p~~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~~~l~~ 83 (319)
T 3ado_A 4 PAAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAE 83 (319)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHH
T ss_pred CCCCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccccchHh
Confidence 345789999999999999999999999999999998865432 1222 223567888
Q ss_pred HhhcCCEEEEeCCCchHHHH-HhcCCCccccCCCCCCCeEEE-EcCCCCHHHHHHHHHHHhhchhhhccCCCCCceEEeC
Q 018506 98 VAEASDVVITMLPSSSHVLD-VYNGPNGLLQGGNSVRPQLLI-DSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDA 175 (355)
Q Consensus 98 ~~~~aDiVi~~v~~~~~~~~-vl~~~~~~l~~~~~~~~~ivi-~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~ 175 (355)
++++||+||-++|..-.++. ++.+++.+++ ++.|+- |+|+.++. ++.+.+.+ ..++-+.||+++
T Consensus 84 a~~~ad~ViEav~E~l~iK~~lf~~l~~~~~-----~~aIlaSNTSsl~is---~ia~~~~~------p~r~ig~HffNP 149 (319)
T 3ado_A 84 AVEGVVHIQECVPENLDLKRKIFAQLDSIVD-----DRVVLSSSSSCLLPS---KLFTGLAH------VKQCIVAHPVNP 149 (319)
T ss_dssp HTTTEEEEEECCCSCHHHHHHHHHHHHTTCC-----SSSEEEECCSSCCHH---HHHTTCTT------GGGEEEEEECSS
T ss_pred HhccCcEEeeccccHHHHHHHHHHHHHHHhh-----hcceeehhhhhccch---hhhhhccC------CCcEEEecCCCC
Confidence 99999999999999988875 5555444443 344443 33333443 34333321 111224789887
Q ss_pred CCCCChHHHhcCceEEEecCCHHHHHHHHHHHHHcCCCeEEe-CC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Q 018506 176 PVSGGVLAAEAGTLTFMVGGSEDAYQAAKPLFLSMGKNTIYC-GG-AGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGI 253 (355)
Q Consensus 176 pv~g~~~~~~~g~~~~~~gg~~~~~~~v~~ll~~~g~~~~~~-g~-~g~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gi 253 (355)
|-.-.......+..+ ++++++.+..+++.+|++++.+ .+ +|. +.|.+. ...+.|++.+.++.+.
T Consensus 150 ~~~m~LVEiv~g~~T-----s~~~~~~~~~~~~~~gk~pv~v~kd~pGF------i~NRl~---~~~~~EA~~lv~eGva 215 (319)
T 3ado_A 150 PYYIPLVELVPHPET-----SPATVDRTHALMRKIGQSPVRVLKEIDGF------VLNRLQ---YAIISEAWRLVEEGIV 215 (319)
T ss_dssp TTTCCEEEEEECTTC-----CHHHHHHHHHHHHHTTCEEEECSSCCTTT------THHHHH---HHHHHHHHHHHHTTSS
T ss_pred ccccchHHhcCCCCC-----cHHHHHHHHHHHHHhCCccCCcCCCCCCE------eHHHHH---HHHHHHHHHHHHhCCC
Confidence 755444443334334 8999999999999999887655 44 432 335544 4457899999999999
Q ss_pred CHHHHHHHHHhcCCCcc
Q 018506 254 SASTLTKILNSSSARCW 270 (355)
Q Consensus 254 ~~~~~~~~~~~~~~~s~ 270 (355)
+++++..++..+.+..|
T Consensus 216 s~edID~~~~~g~g~~~ 232 (319)
T 3ado_A 216 SPSDLDLVMSDGLGMRY 232 (319)
T ss_dssp CHHHHHHHHHTTHHHHH
T ss_pred CHHHHHHHHHhCCCCCC
Confidence 99999999987765433
No 86
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=99.57 E-value=1.3e-14 Score=127.09 Aligned_cols=155 Identities=12% Similarity=0.068 Sum_probs=106.4
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHHHHhcCCC
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNGPN 123 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl~~~~ 123 (355)
..|||+|||+|.||++|+..|.++||+|++|++. ++ ++++| |+|+|+. .+.+++.++.
T Consensus 5 ~~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~------------------~~-~~~aD--ilavP~~-ai~~vl~~l~ 62 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP------------------ED-IRDFE--LVVIDAH-GVEGYVEKLS 62 (232)
T ss_dssp CCCEEEEECCSCCCSCHHHHHHHTTCEEEECSSG------------------GG-GGGCS--EEEECSS-CHHHHHHHHH
T ss_pred CCcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH------------------HH-hccCC--EEEEcHH-HHHHHHHHHH
Confidence 4589999999999999999999999999999982 12 46799 8999986 8888886654
Q ss_pred ccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCceEE-eCCCCCChHHHhcCceEEEecCCHHHHHH
Q 018506 124 GLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVML-DAPVSGGVLAAEAGTLTFMVGGSEDAYQA 202 (355)
Q Consensus 124 ~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~-~~pv~g~~~~~~~g~~~~~~gg~~~~~~~ 202 (355)
+.+ .++++|+|+|+..+... +.. +.. . +..|+ .+|+.+. ..++.+++++.++.
T Consensus 63 ~~l-----~~g~ivvd~sgs~~~~v--l~~-~~~-----~-----g~~fvg~HPm~g~--------~~~i~a~d~~a~~~ 116 (232)
T 3dfu_A 63 AFA-----RRGQMFLHTSLTHGITV--MDP-LET-----S-----GGIVMSAHPIGQD--------RWVASALDELGETI 116 (232)
T ss_dssp TTC-----CTTCEEEECCSSCCGGG--GHH-HHH-----T-----TCEEEEEEEEETT--------EEEEEESSHHHHHH
T ss_pred Hhc-----CCCCEEEEECCcCHHHH--HHH-HHh-----C-----CCcEEEeeeCCCC--------ceeeeCCCHHHHHH
Confidence 433 25679999876544321 111 111 1 14555 4788654 35666678889999
Q ss_pred HHHHHHHcCCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 018506 203 AKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLG 248 (355)
Q Consensus 203 v~~ll~~~g~~~~~~g~~g~a~~~Kl~~n~~~~~~~~~~~Ea~~la 248 (355)
++++++.+|.+++++++.......-.+ .....+..+..++..+.
T Consensus 117 l~~L~~~lG~~vv~~~~~~hd~~~AAv--sh~nhLv~L~~~A~~ll 160 (232)
T 3dfu_A 117 VGLLVGELGGSIVEIADDKRAQLAAAL--TYAGFLSTLQRDASYFL 160 (232)
T ss_dssp HHHHHHHTTCEECCCCGGGHHHHHHHH--HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCEEEEeCHHHHhHHHHHH--HHHHHHHHHHHHHHHHH
Confidence 999999999999999874333221111 11223344556666664
No 87
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=99.54 E-value=3e-14 Score=132.95 Aligned_cols=193 Identities=16% Similarity=0.135 Sum_probs=124.1
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhH-HHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHHHHhc-C
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNV-MKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYN-G 121 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~-~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl~-~ 121 (355)
..|||+|||+|.||.++|..|.+.|++|++|+|++++ .+...+.|+... ++.++++++|+||+|+|.. ...+++. .
T Consensus 15 ~~~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~~~~~~~a~~~G~~~~-~~~e~~~~aDvVilavp~~-~~~~v~~~~ 92 (338)
T 1np3_A 15 QGKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEAHGLKVA-DVKTAVAAADVVMILTPDE-FQGRLYKEE 92 (338)
T ss_dssp HTSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHTTCEEE-CHHHHHHTCSEEEECSCHH-HHHHHHHHH
T ss_pred cCCEEEEECchHHHHHHHHHHHHCcCEEEEEECChHHHHHHHHHCCCEEc-cHHHHHhcCCEEEEeCCcH-HHHHHHHHH
Confidence 4578999999999999999999999999999998876 555566777655 8889999999999999975 6678876 6
Q ss_pred CCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCceEE-eCCCCCChH---HHh---cCceEEEe-
Q 018506 122 PNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVML-DAPVSGGVL---AAE---AGTLTFMV- 193 (355)
Q Consensus 122 ~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~-~~pv~g~~~---~~~---~g~~~~~~- 193 (355)
+.+.++ ++++|+++++... .+.+... . .+..++ ..| .+... ... .|...+++
T Consensus 93 i~~~l~-----~~~ivi~~~gv~~----~~~~~~~------~----~~~~vv~~~P-~gp~~a~~~l~~~G~g~~~ii~~ 152 (338)
T 1np3_A 93 IEPNLK-----KGATLAFAHGFSI----HYNQVVP------R----ADLDVIMIAP-KAPGHTVRSEFVKGGGIPDLIAI 152 (338)
T ss_dssp TGGGCC-----TTCEEEESCCHHH----HTTSSCC------C----TTCEEEEEEE-SSCSHHHHHHHHTTCCCCEEEEE
T ss_pred HHhhCC-----CCCEEEEcCCchh----HHHhhcC------C----CCcEEEeccC-CCCchhHHHHHhccCCCeEEEEe
Confidence 554443 4578888754221 1111100 0 113333 345 22221 111 25545444
Q ss_pred --cCCHHHHHHHHHHHHHcCC-C--eEEeCCcchHHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCHHHH
Q 018506 194 --GGSEDAYQAAKPLFLSMGK-N--TIYCGGAGNGAAAKICNN-LTMAVSMLGVSEALTLGQSLGISASTL 258 (355)
Q Consensus 194 --gg~~~~~~~v~~ll~~~g~-~--~~~~g~~g~a~~~Kl~~n-~~~~~~~~~~~Ea~~la~~~Gi~~~~~ 258 (355)
..+.++.+.++.+++.+|. + ++.+..........+..+ .+.+....+++.++....+.|++++..
T Consensus 153 ~~~~~~~a~~~~~~l~~~lG~~~agv~~~~~~~~~~~~~~~s~~~l~G~lp~~ia~~~e~l~~~Gl~~~~a 223 (338)
T 1np3_A 153 YQDASGNAKNVALSYACGVGGGRTGIIETTFKDETETDLFGEQAVLCGGCVELVKAGFETLVEAGYAPEMA 223 (338)
T ss_dssp EECSSSCHHHHHHHHHHHTTHHHHCEEECCHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHTTCCHHHH
T ss_pred cCCCCHHHHHHHHHHHHHcCCCccceEeechhcccchHHHHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHH
Confidence 3467788999999999998 4 666653223333334444 222233344455555566899998754
No 88
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=99.54 E-value=1.1e-13 Score=132.48 Aligned_cols=90 Identities=16% Similarity=0.117 Sum_probs=71.5
Q ss_pred CceEEEEcccHHhHHHHHHHHH-CCCcEEEEe---CChhHHHHH-HhCC---------C---------C-CCCCHHHHhh
Q 018506 45 FESVGFIGLGNMGFRMASNLMK-AGYKMAVHD---VNCNVMKMF-SDMG---------V---------P-TKETPFEVAE 100 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~-~G~~V~v~d---r~~~~~~~l-~~~g---------~---------~-~~~s~~e~~~ 100 (355)
+|||+|||+|.||+++|..|++ +||+|++|+ |++++++.+ ++.+ . . .+++++++++
T Consensus 2 ~mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 81 (404)
T 3c7a_A 2 TVKVCVCGGGNGAHTLSGLAASRDGVEVRVLTLFADEAERWTKALGADELTVIVNEKDGTQTEVKSRPKVITKDPEIAIS 81 (404)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSTTEEEEEECCSTTHHHHHHHHHTTSCEEEEEECSSSCEEEEEECCSEEESCHHHHHT
T ss_pred CceEEEECCCHHHHHHHHHHHhCCCCEEEEEeCCCCcHHHHHHHHhhccceeeeecCCCccceeeccceEEeCCHHHHhC
Confidence 4899999999999999999998 599999999 888888874 4332 1 1 4567888888
Q ss_pred cCCEEEEeCCCchHHHHHhcCCCccccCCCCCCCeEEEEc
Q 018506 101 ASDVVITMLPSSSHVLDVYNGPNGLLQGGNSVRPQLLIDS 140 (355)
Q Consensus 101 ~aDiVi~~v~~~~~~~~vl~~~~~~l~~~~~~~~~ivi~~ 140 (355)
++|+||+|||.. .+++++..+.+.+. ++++|++.
T Consensus 82 ~aD~Vilav~~~-~~~~v~~~l~~~l~-----~~~ivv~~ 115 (404)
T 3c7a_A 82 GADVVILTVPAF-AHEGYFQAMAPYVQ-----DSALIVGL 115 (404)
T ss_dssp TCSEEEECSCGG-GHHHHHHHHTTTCC-----TTCEEEET
T ss_pred CCCEEEEeCchH-HHHHHHHHHHhhCC-----CCcEEEEc
Confidence 999999999975 67888877666553 34677775
No 89
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=99.38 E-value=2.3e-12 Score=130.96 Aligned_cols=192 Identities=15% Similarity=0.226 Sum_probs=128.9
Q ss_pred CCCCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhC----------------------CCCCCCCHHHHh
Q 018506 42 SCQFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDM----------------------GVPTKETPFEVA 99 (355)
Q Consensus 42 ~~~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~----------------------g~~~~~s~~e~~ 99 (355)
.+...||+|||+|.||..||..++.+|++|+++|++++.++...+. .+..+++. +.+
T Consensus 313 ~~~i~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~l 391 (742)
T 3zwc_A 313 AQPVSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSST-KEL 391 (742)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEEESCG-GGG
T ss_pred cccccEEEEEcccHHHHHHHHHHHhCCCchhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhcccCcH-HHH
Confidence 3456799999999999999999999999999999999865432210 11233444 446
Q ss_pred hcCCEEEEeCCCchHHHH-HhcCCCccccCCCCCCCeEEE-EcCCCCHHHHHHHHHHHhhchhhhccCCCCCceEEeCCC
Q 018506 100 EASDVVITMLPSSSHVLD-VYNGPNGLLQGGNSVRPQLLI-DSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPV 177 (355)
Q Consensus 100 ~~aDiVi~~v~~~~~~~~-vl~~~~~~l~~~~~~~~~ivi-~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~pv 177 (355)
++||+||.+|+..-.++. ++.+++.+++ ++.|+. |+|+.++. .+.+.+.+ ..++-+.||.++|-
T Consensus 392 ~~aDlVIEAV~E~l~iK~~vf~~le~~~~-----~~aIlASNTSsl~i~---~ia~~~~~------p~r~ig~HFfnP~~ 457 (742)
T 3zwc_A 392 STVDLVVEAVFEDMNLKKKVFAELSALCK-----PGAFLCTNTSALNVD---DIASSTDR------PQLVIGTHFFSPAH 457 (742)
T ss_dssp GSCSEEEECCCSCHHHHHHHHHHHHHHSC-----TTCEEEECCSSSCHH---HHHTTSSC------GGGEEEEECCSSTT
T ss_pred hhCCEEEEeccccHHHHHHHHHHHhhcCC-----CCceEEecCCcCChH---HHHhhcCC------ccccccccccCCCC
Confidence 799999999999988885 5555455543 344443 33344433 34433321 11122478888765
Q ss_pred CCChHHHhcCceEEEecCCHHHHHHHHHHHHHcCCCeEEeCC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Q 018506 178 SGGVLAAEAGTLTFMVGGSEDAYQAAKPLFLSMGKNTIYCGG-AGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISAS 256 (355)
Q Consensus 178 ~g~~~~~~~g~~~~~~gg~~~~~~~v~~ll~~~g~~~~~~g~-~g~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gi~~~ 256 (355)
.........+.-+ ++++++.+..+.+.+|+.++.+.+ +| .+.|.+. ...+.|++.+..+ |.+++
T Consensus 458 ~m~LVEvi~g~~T-----s~e~~~~~~~~~~~lgK~pV~vkd~pG------Fi~NRi~---~~~~~ea~~l~~e-G~~~~ 522 (742)
T 3zwc_A 458 VMRLLEVIPSRYS-----SPTTIATVMSLSKKIGKIGVVVGNCYG------FVGNRML---APYYNQGFFLLEE-GSKPE 522 (742)
T ss_dssp TCCEEEEEECSSC-----CHHHHHHHHHHHHHTTCEEEECCCSTT------TTHHHHH---HHHHHHHHHHHHT-TCCHH
T ss_pred CCceEEEecCCCC-----CHHHHHHHHHHHHHhCCCCcccCCCCC------ccHHHHh---hHHHHHHHHHHHc-CCCHH
Confidence 4444333333334 899999999999999999988876 33 2346544 3446898888765 78888
Q ss_pred HHHHHHH
Q 018506 257 TLTKILN 263 (355)
Q Consensus 257 ~~~~~~~ 263 (355)
++.+++.
T Consensus 523 ~id~a~~ 529 (742)
T 3zwc_A 523 DVDGVLE 529 (742)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8777764
No 90
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=99.33 E-value=1.1e-12 Score=119.15 Aligned_cols=117 Identities=16% Similarity=0.229 Sum_probs=92.2
Q ss_pred cccccCCCCCCCCCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCC
Q 018506 32 MRRFFSSQVPSCQFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPS 111 (355)
Q Consensus 32 ~~~~~~~~~~~~~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~ 111 (355)
+.+|.+.+......++|||||+|.||..+|+.|...|++|++|||+++..+. ....++++++++++|+|++++|.
T Consensus 109 ~g~w~~~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~-----~~~~~~l~ell~~aDiV~l~~P~ 183 (290)
T 3gvx_A 109 AGIFRQSPTTLLYGKALGILGYGGIGRRVAHLAKAFGMRVIAYTRSSVDQNV-----DVISESPADLFRQSDFVLIAIPL 183 (290)
T ss_dssp TTCCCCCCCCCCTTCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSCCCTTC-----SEECSSHHHHHHHCSEEEECCCC
T ss_pred hcccccCCceeeecchheeeccCchhHHHHHHHHhhCcEEEEEecccccccc-----ccccCChHHHhhccCeEEEEeec
Confidence 3467766554556689999999999999999999999999999998765432 34556899999999999999997
Q ss_pred chHHHHHhcCCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhh
Q 018506 112 SSHVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSN 157 (355)
Q Consensus 112 ~~~~~~vl~~~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~ 157 (355)
..+++.++.. +.++.+ .++.++||++++.+...+.+.+.+.+
T Consensus 184 t~~t~~li~~--~~l~~m--k~gailIN~aRG~~vd~~aL~~aL~~ 225 (290)
T 3gvx_A 184 TDKTRGMVNS--RLLANA--RKNLTIVNVARADVVSKPDMIGFLKE 225 (290)
T ss_dssp CTTTTTCBSH--HHHTTC--CTTCEEEECSCGGGBCHHHHHHHHHH
T ss_pred cccchhhhhH--HHHhhh--hcCceEEEeehhcccCCcchhhhhhh
Confidence 6666665532 234432 36789999999998888888888864
No 91
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=99.33 E-value=3e-12 Score=118.97 Aligned_cols=111 Identities=18% Similarity=0.196 Sum_probs=87.2
Q ss_pred CCCCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHHHHhcC
Q 018506 42 SCQFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNG 121 (355)
Q Consensus 42 ~~~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl~~ 121 (355)
....++|||||+|.||..+|+.|...|++|++|||++++.+...+.++... +++++++++|+|++++|....++.++..
T Consensus 152 ~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~-~l~e~l~~aDvVi~~vp~~~~t~~~i~~ 230 (330)
T 2gcg_A 152 GLTQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEFV-STPELAAQSDFIVVACSLTPATEGLCNK 230 (330)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHGGGTCCEEEEESSSCCHHHHHTTTCEEC-CHHHHHHHCSEEEECCCCCTTTTTCBSH
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcchhHHHhcCceeC-CHHHHHhhCCEEEEeCCCChHHHHhhCH
Confidence 345689999999999999999999999999999998877666666666555 8899999999999999987665555431
Q ss_pred CCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhh
Q 018506 122 PNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSN 157 (355)
Q Consensus 122 ~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~ 157 (355)
..++.. .++.++||++++.+.....+.+.+.+
T Consensus 231 --~~~~~m--k~gailIn~srg~~v~~~aL~~aL~~ 262 (330)
T 2gcg_A 231 --DFFQKM--KETAVFINISRGDVVNQDDLYQALAS 262 (330)
T ss_dssp --HHHHHS--CTTCEEEECSCGGGBCHHHHHHHHHH
T ss_pred --HHHhcC--CCCcEEEECCCCcccCHHHHHHHHHc
Confidence 122221 25679999999988777788887764
No 92
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=99.31 E-value=3.1e-14 Score=131.39 Aligned_cols=134 Identities=16% Similarity=0.204 Sum_probs=94.8
Q ss_pred CCceEEEEcccHHhHHHHHHHHHC-CC-cEEEEeCChhHHHHHHhC-C--CCCCCCHHHHhhcCCEEEEeCCCchHHHHH
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKA-GY-KMAVHDVNCNVMKMFSDM-G--VPTKETPFEVAEASDVVITMLPSSSHVLDV 118 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~-G~-~V~v~dr~~~~~~~l~~~-g--~~~~~s~~e~~~~aDiVi~~v~~~~~~~~v 118 (355)
..++|+|||+|.||..++..|.+. |+ +|.+|||++++.+.+.+. + +..+++++++++++|+||+|+|.. +.+
T Consensus 134 ~~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~e~v~~aDiVi~atp~~---~~v 210 (312)
T 2i99_A 134 SSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTVQGEVRVCSSVQEAVAGADVIITVTLAT---EPI 210 (312)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECSSHHHHHHHHHHSSSCCEECSSHHHHHTTCSEEEECCCCS---SCC
T ss_pred CCcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHhhCCeEEeCCHHHHHhcCCEEEEEeCCC---Ccc
Confidence 457999999999999999999886 76 899999999999988763 5 666789999999999999999853 333
Q ss_pred hcCCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCCCCceEEe----CCC-CCCh---HHHhcCceE
Q 018506 119 YNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSWENPVMLD----APV-SGGV---LAAEAGTLT 190 (355)
Q Consensus 119 l~~~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~----~pv-~g~~---~~~~~g~~~ 190 (355)
+.. .++ .++++|+++++..|.. +++.+.+.+ . +..|+| +|+ .|.. .....+++.
T Consensus 211 ~~~--~~l-----~~g~~vi~~g~~~p~~-~el~~~~~~-----~-----g~~~vD~~~~a~~~~G~~~~~~~~~~g~L~ 272 (312)
T 2i99_A 211 LFG--EWV-----KPGAHINAVGASRPDW-RELDDELMK-----E-----AVLYVDSQEAALKESGDVLLSGAEIFAELG 272 (312)
T ss_dssp BCG--GGS-----CTTCEEEECCCCSTTC-CSBCHHHHH-----H-----SEEEESCHHHHHHHCHHHHTTTCCCCEEHH
T ss_pred cCH--HHc-----CCCcEEEeCCCCCCCc-eeccHHHHh-----c-----CEEEECCHHHHHhhcCCcccChhhccccHH
Confidence 322 233 2567999998888864 555544432 1 267888 454 3332 112234455
Q ss_pred EEecCCHH
Q 018506 191 FMVGGSED 198 (355)
Q Consensus 191 ~~~gg~~~ 198 (355)
.|++|+.+
T Consensus 273 ~~v~G~~~ 280 (312)
T 2i99_A 273 EVIKGVKP 280 (312)
T ss_dssp HHHHTSSC
T ss_pred HHhCCCCC
Confidence 56666543
No 93
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=99.30 E-value=3.3e-13 Score=119.60 Aligned_cols=161 Identities=19% Similarity=0.122 Sum_probs=108.0
Q ss_pred ceEEEEcccHHhHHHHHHHHHCCCcE-EEEeCChhHHHHHHhCCCCCCCCHHHHh-hcCCEEEEeCCCchHHHHHhcCCC
Q 018506 46 ESVGFIGLGNMGFRMASNLMKAGYKM-AVHDVNCNVMKMFSDMGVPTKETPFEVA-EASDVVITMLPSSSHVLDVYNGPN 123 (355)
Q Consensus 46 mkIgiIG~G~mG~~ia~~L~~~G~~V-~v~dr~~~~~~~l~~~g~~~~~s~~e~~-~~aDiVi~~v~~~~~~~~vl~~~~ 123 (355)
|||||||+|.||..+++.|.+.|+++ .+||+++ +.+. ..+++++++ .++|+|++|+|+....+.+..
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~~g~~lv~v~d~~~-~~~~-------~~~~~~~l~~~~~DvVv~~~~~~~~~~~~~~--- 69 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLERNGFEIAAILDVRG-EHEK-------MVRGIDEFLQREMDVAVEAASQQAVKDYAEK--- 69 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSC-CCTT-------EESSHHHHTTSCCSEEEECSCHHHHHHHHHH---
T ss_pred CEEEEECCCHHHHHHHHHHhcCCCEEEEEEecCc-chhh-------hcCCHHHHhcCCCCEEEECCCHHHHHHHHHH---
Confidence 68999999999999999999999997 7999985 2211 567899988 689999999997644443322
Q ss_pred ccccCCCCCCCeEEEEcCCCCHHHH---HHHHHHHhhchhhhccCCCCCceEEeCCCCCChHHHhcCceEEEecCCHHHH
Q 018506 124 GLLQGGNSVRPQLLIDSSTIDPQTS---RNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAY 200 (355)
Q Consensus 124 ~~l~~~~~~~~~ivi~~st~~~~~~---~~l~~~~~~~~~~~~~g~~~~~~~~~~pv~g~~~~~~~g~~~~~~gg~~~~~ 200 (355)
.++ .|+.+++.++..+... +++.+...+ .+. ..++++|++|+......+.+ +++...+
T Consensus 70 -~l~-----~G~~vv~~~~~~~~~~~~~~~l~~~a~~-----~g~----~~~i~~~~~g~~~~~~~~~~----~~~~~~~ 130 (236)
T 2dc1_A 70 -ILK-----AGIDLIVLSTGAFADRDFLSRVREVCRK-----TGR----RVYIASGAIGGLDAIFSASE----LIEEIVL 130 (236)
T ss_dssp -HHH-----TTCEEEESCGGGGGSHHHHHHHHHHHHH-----HCC----CEEECCTTCSCHHHHHHTGG----GEEEEEE
T ss_pred -HHH-----CCCcEEEECcccCChHHHHHHHHHHHHh-----cCC----eEEecCccccChHHHHHhhc----cccEEEE
Confidence 333 4568888887764322 556555432 111 23789999999887776663 3332222
Q ss_pred HHHHHHHHHcCCCeEEeCCcchH-HHHHHHHHHHHHH
Q 018506 201 QAAKPLFLSMGKNTIYCGGAGNG-AAAKICNNLTMAV 236 (355)
Q Consensus 201 ~~v~~ll~~~g~~~~~~g~~g~a-~~~Kl~~n~~~~~ 236 (355)
...++.++..+.++++.|+.+.+ ..+|...|.....
T Consensus 131 ~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~n~~~~~ 167 (236)
T 2dc1_A 131 TTRKNWRQFGRKGVIFEGSASEAAQKFPKNLNVAATL 167 (236)
T ss_dssp EEEEEGGGTTSCEEEEEEEHHHHHHHSTTCCHHHHHH
T ss_pred EEEcChHHcCcceEEEeccHHHHHHHCCchHHHHHHH
Confidence 33333455567777888885443 4667666765433
No 94
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=99.29 E-value=2.5e-12 Score=118.51 Aligned_cols=120 Identities=13% Similarity=0.171 Sum_probs=93.8
Q ss_pred cccccCCCCCCCCCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCC
Q 018506 32 MRRFFSSQVPSCQFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPS 111 (355)
Q Consensus 32 ~~~~~~~~~~~~~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~ 111 (355)
+.+|.+.+......++|||||+|.||..+|++|...|++|++|||++...+.+. +.....++++++++||+|++++|.
T Consensus 127 ~g~W~~~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~--~~~~~~~l~ell~~aDvV~l~lPl 204 (324)
T 3hg7_A 127 QRLWQSHPYQGLKGRTLLILGTGSIGQHIAHTGKHFGMKVLGVSRSGRERAGFD--QVYQLPALNKMLAQADVIVSVLPA 204 (324)
T ss_dssp TTCCCCCCCCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCCTTCS--EEECGGGHHHHHHTCSEEEECCCC
T ss_pred hCCCcCCCCcccccceEEEEEECHHHHHHHHHHHhCCCEEEEEcCChHHhhhhh--cccccCCHHHHHhhCCEEEEeCCC
Confidence 447877666666778999999999999999999999999999999874432221 122346899999999999999998
Q ss_pred chHHHHHhcCCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhh
Q 018506 112 SSHVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSN 157 (355)
Q Consensus 112 ~~~~~~vl~~~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~ 157 (355)
..+++.++.. +.++.+ .++.++||++.+.+...+.+.+.+.+
T Consensus 205 t~~T~~li~~--~~l~~m--k~gailIN~aRG~~vde~aL~~aL~~ 246 (324)
T 3hg7_A 205 TRETHHLFTA--SRFEHC--KPGAILFNVGRGNAINEGDLLTALRT 246 (324)
T ss_dssp CSSSTTSBCT--TTTTCS--CTTCEEEECSCGGGBCHHHHHHHHHT
T ss_pred CHHHHHHhHH--HHHhcC--CCCcEEEECCCchhhCHHHHHHHHHc
Confidence 7677776643 244443 36789999999998888888888864
No 95
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=99.26 E-value=1.5e-11 Score=113.03 Aligned_cols=119 Identities=17% Similarity=0.182 Sum_probs=90.0
Q ss_pred ccccC--CCCCCCCCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCC
Q 018506 33 RRFFS--SQVPSCQFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLP 110 (355)
Q Consensus 33 ~~~~~--~~~~~~~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~ 110 (355)
..|.+ ........++|||||+|.||..+|+.|...|++|++|||++++ +...+.|+.. .+++++++++|+|++++|
T Consensus 128 g~w~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~-~~l~ell~~aDvV~l~~p 205 (307)
T 1wwk_A 128 GVWAKKEAMGIELEGKTIGIIGFGRIGYQVAKIANALGMNILLYDPYPNE-ERAKEVNGKF-VDLETLLKESDVVTIHVP 205 (307)
T ss_dssp TCCCTTTCCBCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHHHTTCEE-CCHHHHHHHCSEEEECCC
T ss_pred CCCCccCcCCcccCCceEEEEccCHHHHHHHHHHHHCCCEEEEECCCCCh-hhHhhcCccc-cCHHHHHhhCCEEEEecC
Confidence 35754 2223445689999999999999999999999999999999877 4455566654 378999999999999999
Q ss_pred CchHHHHHhcCCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhh
Q 018506 111 SSSHVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSN 157 (355)
Q Consensus 111 ~~~~~~~vl~~~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~ 157 (355)
...+++.++.. ..++.. .++.++||++++.+.....+.+.+.+
T Consensus 206 ~~~~t~~li~~--~~l~~m--k~ga~lin~arg~~vd~~aL~~aL~~ 248 (307)
T 1wwk_A 206 LVESTYHLINE--ERLKLM--KKTAILINTSRGPVVDTNALVKALKE 248 (307)
T ss_dssp CSTTTTTCBCH--HHHHHS--CTTCEEEECSCGGGBCHHHHHHHHHH
T ss_pred CChHHhhhcCH--HHHhcC--CCCeEEEECCCCcccCHHHHHHHHHh
Confidence 87666555431 133322 25689999999887777778787764
No 96
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=99.25 E-value=8.1e-12 Score=115.07 Aligned_cols=119 Identities=12% Similarity=0.107 Sum_probs=90.6
Q ss_pred ccccCCCCCCCCCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCc
Q 018506 33 RRFFSSQVPSCQFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSS 112 (355)
Q Consensus 33 ~~~~~~~~~~~~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~ 112 (355)
..|..........++|||||+|.||..+|+.|...|++|++|||++++. ...+.|+.. .+++++++.+|+|++++|..
T Consensus 130 g~w~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~~~g~~~-~~l~ell~~aDvVvl~~P~~ 207 (313)
T 2ekl_A 130 GIFKKIEGLELAGKTIGIVGFGRIGTKVGIIANAMGMKVLAYDILDIRE-KAEKINAKA-VSLEELLKNSDVISLHVTVS 207 (313)
T ss_dssp TCCCCCCCCCCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSCCHH-HHHHTTCEE-CCHHHHHHHCSEEEECCCCC
T ss_pred CCCCCCCCCCCCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCcchh-HHHhcCcee-cCHHHHHhhCCEEEEeccCC
Confidence 3575333344566899999999999999999999999999999998775 345566654 48999999999999999987
Q ss_pred hHHHHHhcCCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhh
Q 018506 113 SHVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSN 157 (355)
Q Consensus 113 ~~~~~vl~~~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~ 157 (355)
.+++.++.. ..++.. .++.++||++++.+...+.+.+.+.+
T Consensus 208 ~~t~~li~~--~~l~~m--k~ga~lIn~arg~~vd~~aL~~aL~~ 248 (313)
T 2ekl_A 208 KDAKPIIDY--PQFELM--KDNVIIVNTSRAVAVNGKALLDYIKK 248 (313)
T ss_dssp TTSCCSBCH--HHHHHS--CTTEEEEESSCGGGBCHHHHHHHHHT
T ss_pred hHHHHhhCH--HHHhcC--CCCCEEEECCCCcccCHHHHHHHHHc
Confidence 655544421 122222 25789999999988777788888764
No 97
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=99.24 E-value=8.2e-12 Score=116.55 Aligned_cols=110 Identities=16% Similarity=0.169 Sum_probs=89.0
Q ss_pred CCCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHHHHhcCC
Q 018506 43 CQFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNGP 122 (355)
Q Consensus 43 ~~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl~~~ 122 (355)
..-++|||||+|.||..+|+.|...|++|++|||++. .+...+.|+...++++++++++|+|++++|...+++.++..
T Consensus 158 l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~~~~~g~~~~~~l~ell~~aDiV~l~~Plt~~t~~li~~- 235 (352)
T 3gg9_A 158 LKGQTLGIFGYGKIGQLVAGYGRAFGMNVLVWGRENS-KERARADGFAVAESKDALFEQSDVLSVHLRLNDETRSIITV- 235 (352)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSHHH-HHHHHHTTCEECSSHHHHHHHCSEEEECCCCSTTTTTCBCH-
T ss_pred CCCCEEEEEeECHHHHHHHHHHHhCCCEEEEECCCCC-HHHHHhcCceEeCCHHHHHhhCCEEEEeccCcHHHHHhhCH-
Confidence 4568999999999999999999999999999999863 34555677777779999999999999999987666665432
Q ss_pred CccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhh
Q 018506 123 NGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSN 157 (355)
Q Consensus 123 ~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~ 157 (355)
..++.+ .++.++||++.+.+...+.+.+.+.+
T Consensus 236 -~~l~~m--k~gailIN~aRg~~vd~~aL~~aL~~ 267 (352)
T 3gg9_A 236 -ADLTRM--KPTALFVNTSRAELVEENGMVTALNR 267 (352)
T ss_dssp -HHHTTS--CTTCEEEECSCGGGBCTTHHHHHHHH
T ss_pred -HHHhhC--CCCcEEEECCCchhhcHHHHHHHHHh
Confidence 234432 36789999999988877888888864
No 98
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=99.24 E-value=4.8e-11 Score=113.74 Aligned_cols=202 Identities=15% Similarity=0.131 Sum_probs=118.5
Q ss_pred CCCC-ceEEEEcccHHhHHHHHHHHHC------CCcEEEEeCChh-HHHHHHhCCCCC----CCCHHHHhhcCCEEEEeC
Q 018506 42 SCQF-ESVGFIGLGNMGFRMASNLMKA------GYKMAVHDVNCN-VMKMFSDMGVPT----KETPFEVAEASDVVITML 109 (355)
Q Consensus 42 ~~~~-mkIgiIG~G~mG~~ia~~L~~~------G~~V~v~dr~~~-~~~~l~~~g~~~----~~s~~e~~~~aDiVi~~v 109 (355)
...- +||+|||+|+||.++|++|.++ |++|++++|+.+ ..+...+.|+.. +.++.|+++++|+||+++
T Consensus 50 ~L~GiKkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~ViVg~r~~sks~e~A~e~G~~v~d~ta~s~aEAa~~ADVVILaV 129 (525)
T 3fr7_A 50 AFKGIKQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFDEARAAGFTEESGTLGDIWETVSGSDLVLLLI 129 (525)
T ss_dssp HTTTCSEEEEECCTTHHHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHHHHTTCCTTTTCEEEHHHHHHHCSEEEECS
T ss_pred HhcCCCEEEEEeEhHHHHHHHHHHHhcccccCCCCEEEEEeCCchhhHHHHHHCCCEEecCCCCCHHHHHhcCCEEEECC
Confidence 3444 8999999999999999999999 999987776543 445556677775 368999999999999999
Q ss_pred CCchHHHHHhcCCCccccCCCCCCCeEEEEcCCCCHHHHHHHHH---HHhhchhhhccCCCCCce-EEeCCCCCChH---
Q 018506 110 PSSSHVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISA---AVSNCILKEKKDSWENPV-MLDAPVSGGVL--- 182 (355)
Q Consensus 110 ~~~~~~~~vl~~~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~---~~~~~~~~~~~g~~~~~~-~~~~pv~g~~~--- 182 (355)
|+. ...+++.++.+.++ ++++|+.+...... .+.+ .++ .++. +.-+|-.-+..
T Consensus 130 P~~-~~~eVl~eI~p~LK-----~GaILs~AaGf~I~---~le~~~i~~p-----------~dv~VVrVmPNtPg~~VR~ 189 (525)
T 3fr7_A 130 SDA-AQADNYEKIFSHMK-----PNSILGLSHGFLLG---HLQSAGLDFP-----------KNISVIAVCPKGMGPSVRR 189 (525)
T ss_dssp CHH-HHHHHHHHHHHHSC-----TTCEEEESSSHHHH---HHHHTTCCCC-----------TTSEEEEEEESSCHHHHHH
T ss_pred ChH-HHHHHHHHHHHhcC-----CCCeEEEeCCCCHH---HHhhhcccCC-----------CCCcEEEEecCCCchhHHH
Confidence 975 44567765444443 56676555443222 2222 111 0122 22234321221
Q ss_pred --HHh-----cCceEEEe-cC--CHHHHHHHHHHHHHcCCCeEEeCCcchHHHHHHHHH--HHHHHHHHHHHHHHH-HHH
Q 018506 183 --AAE-----AGTLTFMV-GG--SEDAYQAAKPLFLSMGKNTIYCGGAGNGAAAKICNN--LTMAVSMLGVSEALT-LGQ 249 (355)
Q Consensus 183 --~~~-----~g~~~~~~-gg--~~~~~~~v~~ll~~~g~~~~~~g~~g~a~~~Kl~~n--~~~~~~~~~~~Ea~~-la~ 249 (355)
... .|...+++ .. +.+..+.+..++..+|...++-...-.-.-..+..- .+.+...+ +.|++. .+.
T Consensus 190 ~y~~G~~~~g~Gv~~liAv~qd~tgea~e~alala~aiG~~~vieTtf~eE~e~DLfgeqtvLsG~~pA-lieA~~d~lV 268 (525)
T 3fr7_A 190 LYVQGKEINGAGINSSFAVHQDVDGRATDVALGWSVALGSPFTFATTLEQEYKSDIFGERGILLGAVHG-IVEALFRRYT 268 (525)
T ss_dssp HHHHHTTSTTCSCCEEEEEEECSSSCHHHHHHHHHHHTTCSEEEECCHHHHHHHHHHHHHTTTTHHHHH-HHHHHHHHHH
T ss_pred HHhcccccccCCccEEEEcCCCCCHHHHHHHHHHHHHCCCCeeeeeeeeeehhHhhhhhHhhhcCcHHH-HHHHHHHHHH
Confidence 111 45543333 23 347889999999999986321111111111112211 11122222 334443 388
Q ss_pred HcCCCHHHHHHHHHh
Q 018506 250 SLGISASTLTKILNS 264 (355)
Q Consensus 250 ~~Gi~~~~~~~~~~~ 264 (355)
+.|++++..+....+
T Consensus 269 e~G~~pe~Ay~~~~q 283 (525)
T 3fr7_A 269 EQGMDEEMAYKNTVE 283 (525)
T ss_dssp HTTCCHHHHHHHHHH
T ss_pred HcCCCHHHHHHHHHH
Confidence 899999987766554
No 99
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=99.24 E-value=2.9e-12 Score=117.91 Aligned_cols=120 Identities=16% Similarity=0.191 Sum_probs=92.2
Q ss_pred cccccCCCCCCCCCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCC
Q 018506 32 MRRFFSSQVPSCQFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPS 111 (355)
Q Consensus 32 ~~~~~~~~~~~~~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~ 111 (355)
+..|.+.+......++|||||+|.||..+|+.|...|++|++|||+++..+.+... ....+++++++++|+|++++|.
T Consensus 126 ~g~W~~~~~~~l~g~tvGIiG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~--~~~~~l~ell~~aDiV~l~~Pl 203 (315)
T 3pp8_A 126 QALWKPLPEYTREEFSVGIMGAGVLGAKVAESLQAWGFPLRCWSRSRKSWPGVESY--VGREELRAFLNQTRVLINLLPN 203 (315)
T ss_dssp TTCCCCCCCCCSTTCCEEEECCSHHHHHHHHHHHTTTCCEEEEESSCCCCTTCEEE--ESHHHHHHHHHTCSEEEECCCC
T ss_pred hcccCCCCCCCcCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEcCCchhhhhhhhh--cccCCHHHHHhhCCEEEEecCC
Confidence 44787766556667899999999999999999999999999999987653322111 1125788999999999999997
Q ss_pred chHHHHHhcCCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhh
Q 018506 112 SSHVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSN 157 (355)
Q Consensus 112 ~~~~~~vl~~~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~ 157 (355)
..+++.++.. ..++.+ .++.++||++.+.....+.+.+.+.+
T Consensus 204 t~~t~~li~~--~~l~~m--k~gailIN~aRG~~vd~~aL~~aL~~ 245 (315)
T 3pp8_A 204 TAQTVGIINS--ELLDQL--PDGAYVLNLARGVHVQEADLLAALDS 245 (315)
T ss_dssp CGGGTTCBSH--HHHTTS--CTTEEEEECSCGGGBCHHHHHHHHHH
T ss_pred chhhhhhccH--HHHhhC--CCCCEEEECCCChhhhHHHHHHHHHh
Confidence 7677666532 234432 36789999999998888888888864
No 100
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=99.23 E-value=1e-11 Score=113.74 Aligned_cols=116 Identities=14% Similarity=0.150 Sum_probs=89.4
Q ss_pred cccccCC-CCCCCCCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCC
Q 018506 32 MRRFFSS-QVPSCQFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLP 110 (355)
Q Consensus 32 ~~~~~~~-~~~~~~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~ 110 (355)
+..|.+. +......++|||||+|.||..+|++|...|++|++|||+++ +. +.....+++++++.+|+|++++|
T Consensus 110 ~g~w~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~dr~~~--~~----~~~~~~~l~ell~~aDvV~l~~P 183 (303)
T 1qp8_A 110 RGDYGRDVEIPLIQGEKVAVLGLGEIGTRVGKILAALGAQVRGFSRTPK--EG----PWRFTNSLEEALREARAAVCALP 183 (303)
T ss_dssp TTCCCCCSCCCCCTTCEEEEESCSTHHHHHHHHHHHTTCEEEEECSSCC--CS----SSCCBSCSHHHHTTCSEEEECCC
T ss_pred cCCCCCCCCCCCCCCCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcc--cc----CcccCCCHHHHHhhCCEEEEeCc
Confidence 3467544 33345668999999999999999999999999999999876 21 34455688999999999999999
Q ss_pred CchHHHHHhcCCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhh
Q 018506 111 SSSHVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSN 157 (355)
Q Consensus 111 ~~~~~~~vl~~~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~ 157 (355)
...+++.++.. ..++.+ .++.++||++++.+...+.+.+.+.+
T Consensus 184 ~~~~t~~~i~~--~~l~~m--k~gailin~srg~~vd~~aL~~aL~~ 226 (303)
T 1qp8_A 184 LNKHTRGLVKY--QHLALM--AEDAVFVNVGRAEVLDRDGVLRILKE 226 (303)
T ss_dssp CSTTTTTCBCH--HHHTTS--CTTCEEEECSCGGGBCHHHHHHHHHH
T ss_pred CchHHHHHhCH--HHHhhC--CCCCEEEECCCCcccCHHHHHHHHHh
Confidence 88766666531 234432 36789999999988777778887764
No 101
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=99.23 E-value=7.3e-12 Score=116.75 Aligned_cols=112 Identities=17% Similarity=0.241 Sum_probs=91.5
Q ss_pred CCCCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHHHHhcC
Q 018506 42 SCQFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNG 121 (355)
Q Consensus 42 ~~~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl~~ 121 (355)
...-++|||||+|.||..+|++|...|++|++|||++...+...+.|+...++++++++.+|+|++++|...+++.++..
T Consensus 161 ~l~gktvGIIG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~ 240 (351)
T 3jtm_A 161 DLEGKTIGTVGAGRIGKLLLQRLKPFGCNLLYHDRLQMAPELEKETGAKFVEDLNEMLPKCDVIVINMPLTEKTRGMFNK 240 (351)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHGGGCCEEEEECSSCCCHHHHHHHCCEECSCHHHHGGGCSEEEECSCCCTTTTTCBSH
T ss_pred cccCCEEeEEEeCHHHHHHHHHHHHCCCEEEEeCCCccCHHHHHhCCCeEcCCHHHHHhcCCEEEECCCCCHHHHHhhcH
Confidence 34568999999999999999999999999999999876666666667777789999999999999999976666655532
Q ss_pred CCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhh
Q 018506 122 PNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSN 157 (355)
Q Consensus 122 ~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~ 157 (355)
..++.+ .++.++||++.+.+...+.+.+.+.+
T Consensus 241 --~~l~~m--k~gailIN~aRG~~vde~aL~~aL~~ 272 (351)
T 3jtm_A 241 --ELIGKL--KKGVLIVNNARGAIMERQAVVDAVES 272 (351)
T ss_dssp --HHHHHS--CTTEEEEECSCGGGBCHHHHHHHHHH
T ss_pred --HHHhcC--CCCCEEEECcCchhhCHHHHHHHHHh
Confidence 234332 36789999999998888888888864
No 102
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=99.23 E-value=1.4e-11 Score=113.82 Aligned_cols=111 Identities=12% Similarity=0.154 Sum_probs=86.2
Q ss_pred CCCCceEEEEcccHHhHHHHHHHHHCCCcEEEEeC-ChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHHHHhc
Q 018506 42 SCQFESVGFIGLGNMGFRMASNLMKAGYKMAVHDV-NCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYN 120 (355)
Q Consensus 42 ~~~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr-~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl~ 120 (355)
....++|||||+|.||..+|+.|...|++|++||| ++++. ...+.|+...++++++++.+|+|++++|...+++.++.
T Consensus 143 ~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~-~~~~~g~~~~~~l~ell~~aDvVil~~p~~~~t~~~i~ 221 (320)
T 1gdh_A 143 KLDNKTLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRASSS-DEASYQATFHDSLDSLLSVSQFFSLNAPSTPETRYFFN 221 (320)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCCHH-HHHHHTCEECSSHHHHHHHCSEEEECCCCCTTTTTCBS
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcChh-hhhhcCcEEcCCHHHHHhhCCEEEEeccCchHHHhhcC
Confidence 34568999999999999999999999999999999 88763 34445666666899999999999999998766665543
Q ss_pred CCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhh
Q 018506 121 GPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSN 157 (355)
Q Consensus 121 ~~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~ 157 (355)
. ..++.. .++.++||++++.+.....+.+.+.+
T Consensus 222 ~--~~l~~m--k~gailIn~arg~~vd~~aL~~aL~~ 254 (320)
T 1gdh_A 222 K--ATIKSL--PQGAIVVNTARGDLVDNELVVAALEA 254 (320)
T ss_dssp H--HHHTTS--CTTEEEEECSCGGGBCHHHHHHHHHH
T ss_pred H--HHHhhC--CCCcEEEECCCCcccCHHHHHHHHHh
Confidence 2 133322 36789999999877666777777764
No 103
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=99.23 E-value=2.7e-11 Score=112.70 Aligned_cols=110 Identities=15% Similarity=0.204 Sum_probs=85.7
Q ss_pred CCCCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHHHHhcC
Q 018506 42 SCQFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNG 121 (355)
Q Consensus 42 ~~~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl~~ 121 (355)
....++|||||+|.||..+|+.|...|++|++|||++++ +...+.|+.. .+++++++++|+|++++|....++.++..
T Consensus 147 ~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~-~~l~~~l~~aDvVil~vp~~~~t~~~i~~ 224 (334)
T 2dbq_A 147 DVYGKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRKE-EVERELNAEF-KPLEDLLRESDFVVLAVPLTRETYHLINE 224 (334)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHHHHCCEE-CCHHHHHHHCSEEEECCCCCTTTTTCBCH
T ss_pred CCCCCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcch-hhHhhcCccc-CCHHHHHhhCCEEEECCCCChHHHHhhCH
Confidence 345689999999999999999999999999999999877 5444455544 48889999999999999988666555531
Q ss_pred CCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhh
Q 018506 122 PNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSN 157 (355)
Q Consensus 122 ~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~ 157 (355)
..+.. ..++.++||++++.+...+.+.+.+.+
T Consensus 225 --~~~~~--mk~~ailIn~srg~~v~~~aL~~aL~~ 256 (334)
T 2dbq_A 225 --ERLKL--MKKTAILINIARGKVVDTNALVKALKE 256 (334)
T ss_dssp --HHHHH--SCTTCEEEECSCGGGBCHHHHHHHHHH
T ss_pred --HHHhc--CCCCcEEEECCCCcccCHHHHHHHHHh
Confidence 12222 125679999999988877788887764
No 104
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=99.22 E-value=8.3e-12 Score=115.69 Aligned_cols=110 Identities=23% Similarity=0.317 Sum_probs=87.3
Q ss_pred CCCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHHHHhcCC
Q 018506 43 CQFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNGP 122 (355)
Q Consensus 43 ~~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl~~~ 122 (355)
...++|||||+|.||..+|+.|...|++|++|||++.+.+...+.|+... +++++++.+|+|++++|...+++.++..
T Consensus 143 l~g~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~-~l~ell~~aDvV~l~~P~t~~t~~li~~- 220 (330)
T 4e5n_A 143 LDNATVGFLGMGAIGLAMADRLQGWGATLQYHEAKALDTQTEQRLGLRQV-ACSELFASSDFILLALPLNADTLHLVNA- 220 (330)
T ss_dssp STTCEEEEECCSHHHHHHHHHTTTSCCEEEEECSSCCCHHHHHHHTEEEC-CHHHHHHHCSEEEECCCCSTTTTTCBCH-
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCCCcHhHHHhcCceeC-CHHHHHhhCCEEEEcCCCCHHHHHHhCH-
Confidence 45689999999999999999999999999999998755444444555443 8999999999999999977666655532
Q ss_pred CccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhh
Q 018506 123 NGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSN 157 (355)
Q Consensus 123 ~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~ 157 (355)
..++.+ .++.++||++.+.+...+.+.+.+.+
T Consensus 221 -~~l~~m--k~gailIN~arg~~vd~~aL~~aL~~ 252 (330)
T 4e5n_A 221 -ELLALV--RPGALLVNPCRGSVVDEAAVLAALER 252 (330)
T ss_dssp -HHHTTS--CTTEEEEECSCGGGBCHHHHHHHHHH
T ss_pred -HHHhhC--CCCcEEEECCCCchhCHHHHHHHHHh
Confidence 244432 36789999999998888888888864
No 105
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=99.21 E-value=1.3e-11 Score=114.57 Aligned_cols=107 Identities=18% Similarity=0.266 Sum_probs=67.5
Q ss_pred CCCCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHHHHhcC
Q 018506 42 SCQFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNG 121 (355)
Q Consensus 42 ~~~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl~~ 121 (355)
....++|||||+|.||..+|++|...|++|++|||++++ ..+.....++++++++||+|++++|...+++.++..
T Consensus 168 ~l~gktiGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~-----~~~~~~~~sl~ell~~aDvVil~vP~t~~t~~li~~ 242 (340)
T 4dgs_A 168 SPKGKRIGVLGLGQIGRALASRAEAFGMSVRYWNRSTLS-----GVDWIAHQSPVDLARDSDVLAVCVAASAATQNIVDA 242 (340)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCT-----TSCCEECSSHHHHHHTCSEEEECC----------CH
T ss_pred cccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCccc-----ccCceecCCHHHHHhcCCEEEEeCCCCHHHHHHhhH
Confidence 345689999999999999999999999999999998765 233445678999999999999999977777776632
Q ss_pred CCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhh
Q 018506 122 PNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSN 157 (355)
Q Consensus 122 ~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~ 157 (355)
..++.. .++.++||++.+.+...+.+.+.+.+
T Consensus 243 --~~l~~m--k~gailIN~aRG~vvde~aL~~aL~~ 274 (340)
T 4dgs_A 243 --SLLQAL--GPEGIVVNVARGNVVDEDALIEALKS 274 (340)
T ss_dssp --HHHHHT--TTTCEEEECSCC--------------
T ss_pred --HHHhcC--CCCCEEEECCCCcccCHHHHHHHHHc
Confidence 233332 25689999999998887888887754
No 106
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=99.21 E-value=5.4e-12 Score=116.46 Aligned_cols=121 Identities=12% Similarity=0.202 Sum_probs=91.7
Q ss_pred ccccccCCC-CCCCCCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeC
Q 018506 31 AMRRFFSSQ-VPSCQFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITML 109 (355)
Q Consensus 31 ~~~~~~~~~-~~~~~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v 109 (355)
++..|.+.. .....-++|||||+|.||..+|+.|...|++|++|||+++..+.+.. .....++++++++||+|++++
T Consensus 122 ~~~~W~~~~~~~~l~gktvGIiGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~--~~~~~~l~ell~~aDvV~l~l 199 (324)
T 3evt_A 122 GARQWALPMTTSTLTGQQLLIYGTGQIGQSLAAKASALGMHVIGVNTTGHPADHFHE--TVAFTATADALATANFIVNAL 199 (324)
T ss_dssp TTCCSSCSSCCCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCCCCTTCSE--EEEGGGCHHHHHHCSEEEECC
T ss_pred hcCCcccCCCCccccCCeEEEECcCHHHHHHHHHHHhCCCEEEEECCCcchhHhHhh--ccccCCHHHHHhhCCEEEEcC
Confidence 344676653 44456689999999999999999999999999999998765433221 122457889999999999999
Q ss_pred CCchHHHHHhcCCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhh
Q 018506 110 PSSSHVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSN 157 (355)
Q Consensus 110 ~~~~~~~~vl~~~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~ 157 (355)
|...+++.++.. +.++.+ .++.++||++.+.+...+.+.+.+.+
T Consensus 200 Plt~~t~~li~~--~~l~~m--k~gailIN~aRG~~vd~~aL~~aL~~ 243 (324)
T 3evt_A 200 PLTPTTHHLFST--ELFQQT--KQQPMLINIGRGPAVDTTALMTALDH 243 (324)
T ss_dssp CCCGGGTTCBSH--HHHHTC--CSCCEEEECSCGGGBCHHHHHHHHHT
T ss_pred CCchHHHHhcCH--HHHhcC--CCCCEEEEcCCChhhhHHHHHHHHHh
Confidence 987676665532 244432 36789999999998888888888864
No 107
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=99.21 E-value=1.1e-11 Score=115.90 Aligned_cols=112 Identities=16% Similarity=0.186 Sum_probs=88.5
Q ss_pred CCCCceEEEEcccHHhHHHHHHHH-HCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHHHHhc
Q 018506 42 SCQFESVGFIGLGNMGFRMASNLM-KAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYN 120 (355)
Q Consensus 42 ~~~~mkIgiIG~G~mG~~ia~~L~-~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl~ 120 (355)
....++|||||+|.||..+|+.|. ..|++|++|||++++.+...+.|+..+++++++++++|+|++++|....++.++.
T Consensus 160 ~l~g~~vgIIG~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVil~vp~~~~t~~li~ 239 (348)
T 2w2k_A 160 NPRGHVLGAVGLGAIQKEIARKAVHGLGMKLVYYDVAPADAETEKALGAERVDSLEELARRSDCVSVSVPYMKLTHHLID 239 (348)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHTCEECSSHHHHHHHCSEEEECCCCSGGGTTCBC
T ss_pred CCCCCEEEEEEECHHHHHHHHHHHHhcCCEEEEECCCCcchhhHhhcCcEEeCCHHHHhccCCEEEEeCCCChHHHHHhh
Confidence 345689999999999999999999 9999999999998766655555666666899999999999999998766666553
Q ss_pred CCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhh
Q 018506 121 GPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSN 157 (355)
Q Consensus 121 ~~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~ 157 (355)
. ..++. ..++.++||++++.+...+.+.+.+.+
T Consensus 240 ~--~~l~~--mk~gailin~srg~~vd~~aL~~aL~~ 272 (348)
T 2w2k_A 240 E--AFFAA--MKPGSRIVNTARGPVISQDALIAALKS 272 (348)
T ss_dssp H--HHHHH--SCTTEEEEECSCGGGBCHHHHHHHHHT
T ss_pred H--HHHhc--CCCCCEEEECCCCchhCHHHHHHHHHh
Confidence 2 12222 125789999999988877888887764
No 108
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=99.20 E-value=2e-11 Score=113.53 Aligned_cols=109 Identities=16% Similarity=0.179 Sum_probs=86.9
Q ss_pred CCCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHHHHhcCC
Q 018506 43 CQFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNGP 122 (355)
Q Consensus 43 ~~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl~~~ 122 (355)
..-++|||||+|.||..+|++|...|++|++|||++...+... +...++++++++++||+|++++|...+++.++..
T Consensus 171 l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~--g~~~~~~l~ell~~sDvV~l~~Plt~~T~~li~~- 247 (345)
T 4g2n_A 171 LTGRRLGIFGMGRIGRAIATRARGFGLAIHYHNRTRLSHALEE--GAIYHDTLDSLLGASDIFLIAAPGRPELKGFLDH- 247 (345)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHT--TCEECSSHHHHHHTCSEEEECSCCCGGGTTCBCH-
T ss_pred cCCCEEEEEEeChhHHHHHHHHHHCCCEEEEECCCCcchhhhc--CCeEeCCHHHHHhhCCEEEEecCCCHHHHHHhCH-
Confidence 3458999999999999999999999999999999875443322 6666679999999999999999987676665532
Q ss_pred CccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhh
Q 018506 123 NGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSN 157 (355)
Q Consensus 123 ~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~ 157 (355)
..++.+ .++.++||++.+.....+.+.+.+.+
T Consensus 248 -~~l~~m--k~gailIN~aRG~~vde~aL~~aL~~ 279 (345)
T 4g2n_A 248 -DRIAKI--PEGAVVINISRGDLINDDALIEALRS 279 (345)
T ss_dssp -HHHHHS--CTTEEEEECSCGGGBCHHHHHHHHHH
T ss_pred -HHHhhC--CCCcEEEECCCCchhCHHHHHHHHHh
Confidence 233332 36789999999998888888888864
No 109
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=99.20 E-value=3.6e-11 Score=111.54 Aligned_cols=120 Identities=13% Similarity=0.138 Sum_probs=90.7
Q ss_pred cccccCC--CCCCCCCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeC
Q 018506 32 MRRFFSS--QVPSCQFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITML 109 (355)
Q Consensus 32 ~~~~~~~--~~~~~~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v 109 (355)
+..|.+. .......++|||||+|.||..+|+.|...|++|++|||++++ +...+.|+.. .+++++++.+|+|++++
T Consensus 150 ~g~W~~~~~~~~~l~g~tvgIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~-~~l~ell~~aDvV~l~~ 227 (335)
T 2g76_A 150 DGKWERKKFMGTELNGKTLGILGLGRIGREVATRMQSFGMKTIGYDPIISP-EVSASFGVQQ-LPLEEIWPLCDFITVHT 227 (335)
T ss_dssp TTCCCTGGGCBCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSCH-HHHHHTTCEE-CCHHHHGGGCSEEEECC
T ss_pred cCCCCccCCCCcCCCcCEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcch-hhhhhcCcee-CCHHHHHhcCCEEEEec
Confidence 3356532 122345689999999999999999999999999999998776 3445566654 48999999999999999
Q ss_pred CCchHHHHHhcCCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhh
Q 018506 110 PSSSHVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSN 157 (355)
Q Consensus 110 ~~~~~~~~vl~~~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~ 157 (355)
|...+++.++.. +.++.+ .++.++||++++.+...+.+.+.+.+
T Consensus 228 P~t~~t~~li~~--~~l~~m--k~gailIN~arg~vvd~~aL~~aL~~ 271 (335)
T 2g76_A 228 PLLPSTTGLLND--NTFAQC--KKGVRVVNCARGGIVDEGALLRALQS 271 (335)
T ss_dssp CCCTTTTTSBCH--HHHTTS--CTTEEEEECSCTTSBCHHHHHHHHHH
T ss_pred CCCHHHHHhhCH--HHHhhC--CCCcEEEECCCccccCHHHHHHHHHh
Confidence 988766665531 234332 36789999999987777778887764
No 110
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=99.20 E-value=1.9e-11 Score=113.45 Aligned_cols=109 Identities=19% Similarity=0.158 Sum_probs=86.6
Q ss_pred CCCCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHHHHhcC
Q 018506 42 SCQFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNG 121 (355)
Q Consensus 42 ~~~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl~~ 121 (355)
...-++|||||+|.||..+|++|...|++|++|||+++.... +.++... ++++++++||+|++++|...+++.++..
T Consensus 138 ~l~g~tvgIiG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~--~~g~~~~-~l~ell~~aDvV~l~~P~t~~t~~li~~ 214 (334)
T 2pi1_A 138 ELNRLTLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVKREDLK--EKGCVYT-SLDELLKESDVISLHVPYTKETHHMINE 214 (334)
T ss_dssp CGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHHHH--HTTCEEC-CHHHHHHHCSEEEECCCCCTTTTTCBCH
T ss_pred eccCceEEEECcCHHHHHHHHHHHHCcCEEEEECCCcchhhH--hcCceec-CHHHHHhhCCEEEEeCCCChHHHHhhCH
Confidence 345589999999999999999999999999999998876532 4555544 5999999999999999977666665532
Q ss_pred CCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhh
Q 018506 122 PNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSN 157 (355)
Q Consensus 122 ~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~ 157 (355)
..++.+ .++.++||++.+.+...+.+.+.+.+
T Consensus 215 --~~l~~m--k~gailIN~aRg~~vd~~aL~~aL~~ 246 (334)
T 2pi1_A 215 --ERISLM--KDGVYLINTARGKVVDTDALYRAYQR 246 (334)
T ss_dssp --HHHHHS--CTTEEEEECSCGGGBCHHHHHHHHHT
T ss_pred --HHHhhC--CCCcEEEECCCCcccCHHHHHHHHHh
Confidence 234332 36789999999998888888888864
No 111
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=99.19 E-value=1.2e-11 Score=114.62 Aligned_cols=107 Identities=16% Similarity=0.198 Sum_probs=84.3
Q ss_pred CCCCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHHHHhcC
Q 018506 42 SCQFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNG 121 (355)
Q Consensus 42 ~~~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl~~ 121 (355)
....++|||||+|.||..+|+.|...|++|++|||++++. .+.....+++++++++|+|++++|....++.++..
T Consensus 161 ~l~g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~dr~~~~~-----~g~~~~~~l~ell~~aDvVil~vP~~~~t~~li~~ 235 (333)
T 3ba1_A 161 KFSGKRVGIIGLGRIGLAVAERAEAFDCPISYFSRSKKPN-----TNYTYYGSVVELASNSDILVVACPLTPETTHIINR 235 (333)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSCCTT-----CCSEEESCHHHHHHTCSEEEECSCCCGGGTTCBCH
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCchhc-----cCceecCCHHHHHhcCCEEEEecCCChHHHHHhhH
Confidence 3456789999999999999999999999999999987653 24455678999999999999999987666665531
Q ss_pred CCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhh
Q 018506 122 PNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSN 157 (355)
Q Consensus 122 ~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~ 157 (355)
..++.. .++.++||++++.+...+.+.+.+.+
T Consensus 236 --~~l~~m--k~gailIn~srG~~vd~~aL~~aL~~ 267 (333)
T 3ba1_A 236 --EVIDAL--GPKGVLINIGRGPHVDEPELVSALVE 267 (333)
T ss_dssp --HHHHHH--CTTCEEEECSCGGGBCHHHHHHHHHH
T ss_pred --HHHhcC--CCCCEEEECCCCchhCHHHHHHHHHc
Confidence 122221 25679999999998877888888764
No 112
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=99.19 E-value=2.3e-11 Score=114.28 Aligned_cols=112 Identities=18% Similarity=0.220 Sum_probs=90.1
Q ss_pred CCCCceEEEEcccHHhHHHHHHHHHCCCc-EEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHHHHhc
Q 018506 42 SCQFESVGFIGLGNMGFRMASNLMKAGYK-MAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYN 120 (355)
Q Consensus 42 ~~~~mkIgiIG~G~mG~~ia~~L~~~G~~-V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl~ 120 (355)
....++|||||+|.||..+|+.|...|++ |++|||++.+.+...+.|+....+++++++.+|+|++++|...+++.++.
T Consensus 161 ~l~g~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~ 240 (364)
T 2j6i_A 161 DIEGKTIATIGAGRIGYRVLERLVPFNPKELLYYDYQALPKDAEEKVGARRVENIEELVAQADIVTVNAPLHAGTKGLIN 240 (364)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHHHTTEEECSSHHHHHHTCSEEEECCCCSTTTTTCBC
T ss_pred cCCCCEEEEECcCHHHHHHHHHHHhCCCcEEEEECCCccchhHHHhcCcEecCCHHHHHhcCCEEEECCCCChHHHHHhC
Confidence 45668999999999999999999999997 99999988666666666766667899999999999999998766666553
Q ss_pred CCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhh
Q 018506 121 GPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSN 157 (355)
Q Consensus 121 ~~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~ 157 (355)
. ..++.+ .++.++||++++.+...+.+.+.+.+
T Consensus 241 ~--~~l~~m--k~ga~lIn~arG~~vd~~aL~~aL~~ 273 (364)
T 2j6i_A 241 K--ELLSKF--KKGAWLVNTARGAICVAEDVAAALES 273 (364)
T ss_dssp H--HHHTTS--CTTEEEEECSCGGGBCHHHHHHHHHH
T ss_pred H--HHHhhC--CCCCEEEECCCCchhCHHHHHHHHHc
Confidence 2 233332 36789999999988777888888865
No 113
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=99.18 E-value=2.3e-11 Score=114.79 Aligned_cols=112 Identities=13% Similarity=0.125 Sum_probs=88.7
Q ss_pred CCCCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHHHHhcC
Q 018506 42 SCQFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNG 121 (355)
Q Consensus 42 ~~~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl~~ 121 (355)
....++|||||+|.||..+|+.|...|++|++|||++.+.+...+.|+....+++++++.+|+|++++|...+++.++..
T Consensus 188 ~l~gktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~~~G~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~ 267 (393)
T 2nac_A 188 DLEAMHVGTVAAGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWHATREDMYPVCDVVTLNCPLHPETEHMIND 267 (393)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEECSSHHHHGGGCSEEEECSCCCTTTTTCBSH
T ss_pred cCCCCEEEEEeECHHHHHHHHHHHhCCCEEEEEcCCccchhhHhhcCceecCCHHHHHhcCCEEEEecCCchHHHHHhhH
Confidence 34568999999999999999999999999999999876655555556665678999999999999999987666665531
Q ss_pred CCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhh
Q 018506 122 PNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSN 157 (355)
Q Consensus 122 ~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~ 157 (355)
..++.+ .++.++||++.+.+...+.+.+.+.+
T Consensus 268 --~~l~~m--k~gailIN~aRG~~vde~aL~~aL~~ 299 (393)
T 2nac_A 268 --ETLKLF--KRGAYIVNTARGKLCDRDAVARALES 299 (393)
T ss_dssp --HHHTTS--CTTEEEEECSCGGGBCHHHHHHHHHT
T ss_pred --HHHhhC--CCCCEEEECCCchHhhHHHHHHHHHc
Confidence 233332 26789999999987777788888764
No 114
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=99.18 E-value=2.1e-11 Score=113.58 Aligned_cols=111 Identities=17% Similarity=0.167 Sum_probs=87.0
Q ss_pred CCCCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHHHHhcC
Q 018506 42 SCQFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNG 121 (355)
Q Consensus 42 ~~~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl~~ 121 (355)
....++|||||+|.||..+|+.|...|++|++|||++++.. ..+.|+....+++++++.+|+|++++|...+++.++..
T Consensus 165 ~l~g~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~-~~~~g~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~ 243 (347)
T 1mx3_A 165 RIRGETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSDGV-ERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLIND 243 (347)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCTTH-HHHHTCEECSSHHHHHHHCSEEEECCCCCTTCTTSBSH
T ss_pred CCCCCEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcchhh-HhhcCCeecCCHHHHHhcCCEEEEcCCCCHHHHHHhHH
Confidence 34568999999999999999999999999999999865422 23346655668999999999999999987666665532
Q ss_pred CCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhh
Q 018506 122 PNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSN 157 (355)
Q Consensus 122 ~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~ 157 (355)
..++.+ .++.++||++++.+...+.+.+.+.+
T Consensus 244 --~~l~~m--k~gailIN~arg~~vd~~aL~~aL~~ 275 (347)
T 1mx3_A 244 --FTVKQM--RQGAFLVNTARGGLVDEKALAQALKE 275 (347)
T ss_dssp --HHHTTS--CTTEEEEECSCTTSBCHHHHHHHHHH
T ss_pred --HHHhcC--CCCCEEEECCCChHHhHHHHHHHHHh
Confidence 233332 36789999999998888888888865
No 115
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=99.15 E-value=9.8e-11 Score=115.41 Aligned_cols=120 Identities=13% Similarity=0.194 Sum_probs=90.6
Q ss_pred cccccCCC--CCCCCCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeC
Q 018506 32 MRRFFSSQ--VPSCQFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITML 109 (355)
Q Consensus 32 ~~~~~~~~--~~~~~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v 109 (355)
..+|.+.. ......++|||||+|.||..+|++|...|++|++||++++. +...+.|+..+ +++++++.||+|++++
T Consensus 127 ~g~w~~~~~~~~~l~g~~vgIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~~g~~~~-~l~e~~~~aDvV~l~~ 204 (529)
T 1ygy_A 127 EHTWKRSSFSGTEIFGKTVGVVGLGRIGQLVAQRIAAFGAYVVAYDPYVSP-ARAAQLGIELL-SLDDLLARADFISVHL 204 (529)
T ss_dssp TTCCCGGGCCBCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCH-HHHHHHTCEEC-CHHHHHHHCSEEEECC
T ss_pred hCCCcccCcCccccCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEECCCCCh-hHHHhcCcEEc-CHHHHHhcCCEEEECC
Confidence 34675432 22345689999999999999999999999999999998753 33444566554 8999999999999999
Q ss_pred CCchHHHHHhcCCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhh
Q 018506 110 PSSSHVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSN 157 (355)
Q Consensus 110 ~~~~~~~~vl~~~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~ 157 (355)
|...+++.++.. ..+.. ..++.+++|++++.+.....+.+.+.+
T Consensus 205 P~~~~t~~~i~~--~~~~~--~k~g~ilin~arg~iv~~~aL~~al~~ 248 (529)
T 1ygy_A 205 PKTPETAGLIDK--EALAK--TKPGVIIVNAARGGLVDEAALADAITG 248 (529)
T ss_dssp CCSTTTTTCBCH--HHHTT--SCTTEEEEECSCTTSBCHHHHHHHHHT
T ss_pred CCchHHHHHhCH--HHHhC--CCCCCEEEECCCCchhhHHHHHHHHHc
Confidence 987666666543 13332 236789999999988877778787754
No 116
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=99.12 E-value=1.3e-10 Score=106.84 Aligned_cols=104 Identities=17% Similarity=0.215 Sum_probs=81.6
Q ss_pred CCCCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHHHHhcC
Q 018506 42 SCQFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNG 121 (355)
Q Consensus 42 ~~~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl~~ 121 (355)
....++|||||+|.||..+|++|...|++|++|||++++.. + ...+++++++.+|+|++++|...+++.++..
T Consensus 141 ~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~------~-~~~~l~ell~~aDvV~l~~p~~~~t~~li~~ 213 (311)
T 2cuk_A 141 DLQGLTLGLVGMGRIGQAVAKRALAFGMRVVYHARTPKPLP------Y-PFLSLEELLKEADVVSLHTPLTPETHRLLNR 213 (311)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSSS------S-CBCCHHHHHHHCSEEEECCCCCTTTTTCBCH
T ss_pred CCCCCEEEEEEECHHHHHHHHHHHHCCCEEEEECCCCcccc------c-ccCCHHHHHhhCCEEEEeCCCChHHHhhcCH
Confidence 34567899999999999999999999999999999876543 2 2468899999999999999987666665531
Q ss_pred CCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHh
Q 018506 122 PNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVS 156 (355)
Q Consensus 122 ~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~ 156 (355)
..++.. .++.++||++++.+...+.+.+.+.
T Consensus 214 --~~l~~m--k~ga~lin~srg~~vd~~aL~~aL~ 244 (311)
T 2cuk_A 214 --ERLFAM--KRGAILLNTARGALVDTEALVEALR 244 (311)
T ss_dssp --HHHTTS--CTTCEEEECSCGGGBCHHHHHHHHT
T ss_pred --HHHhhC--CCCcEEEECCCCCccCHHHHHHHHh
Confidence 133332 3578999999988777677777764
No 117
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=99.12 E-value=4.5e-11 Score=111.06 Aligned_cols=109 Identities=20% Similarity=0.255 Sum_probs=84.4
Q ss_pred CCCCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHHHHhcC
Q 018506 42 SCQFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNG 121 (355)
Q Consensus 42 ~~~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl~~ 121 (355)
....++|||||+|.||..+|+.|...|++|++|||++++ +...+.|+... +++++++++|+|++++|....++.++..
T Consensus 143 ~l~g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~~-~l~e~l~~aDiVil~vp~~~~t~~~i~~ 220 (333)
T 2d0i_A 143 SLYGKKVGILGMGAIGKAIARRLIPFGVKLYYWSRHRKV-NVEKELKARYM-DIDELLEKSDIVILALPLTRDTYHIINE 220 (333)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCH-HHHHHHTEEEC-CHHHHHHHCSEEEECCCCCTTTTTSBCH
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcch-hhhhhcCceec-CHHHHHhhCCEEEEcCCCChHHHHHhCH
Confidence 455689999999999999999999999999999999876 44444455443 7889999999999999987666665542
Q ss_pred CCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhh
Q 018506 122 PNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSN 157 (355)
Q Consensus 122 ~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~ 157 (355)
..++.. .++ ++||++++.+.....+.+.+.+
T Consensus 221 --~~~~~m--k~g-ilin~srg~~vd~~aL~~aL~~ 251 (333)
T 2d0i_A 221 --ERVKKL--EGK-YLVNIGRGALVDEKAVTEAIKQ 251 (333)
T ss_dssp --HHHHHT--BTC-EEEECSCGGGBCHHHHHHHHHT
T ss_pred --HHHhhC--CCC-EEEECCCCcccCHHHHHHHHHc
Confidence 122221 257 9999999988777777777754
No 118
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=99.12 E-value=1e-10 Score=108.64 Aligned_cols=109 Identities=13% Similarity=0.144 Sum_probs=85.5
Q ss_pred CCCCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHHHHhcC
Q 018506 42 SCQFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNG 121 (355)
Q Consensus 42 ~~~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl~~ 121 (355)
....++|||||+|.||..+|+.|...|++|++|||++++. +.+ .+...++++++++.+|+|++++|...+++.++..
T Consensus 143 ~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~~~-~~~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~ 219 (333)
T 1j4a_A 143 EVRDQVVGVVGTGHIGQVFMQIMEGFGAKVITYDIFRNPE--LEK-KGYYVDSLDDLYKQADVISLHVPDVPANVHMIND 219 (333)
T ss_dssp CGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHH--HHH-TTCBCSCHHHHHHHCSEEEECSCCCGGGTTCBSH
T ss_pred cCCCCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcchh--HHh-hCeecCCHHHHHhhCCEEEEcCCCcHHHHHHHhH
Confidence 3455799999999999999999999999999999988764 222 2455558999999999999999987666665432
Q ss_pred CCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhh
Q 018506 122 PNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSN 157 (355)
Q Consensus 122 ~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~ 157 (355)
..++.. .++.++||++.+.+...+.+.+.+.+
T Consensus 220 --~~l~~m--k~ga~lIn~arg~~vd~~aL~~aL~~ 251 (333)
T 1j4a_A 220 --ESIAKM--KQDVVIVNVSRGPLVDTDAVIRGLDS 251 (333)
T ss_dssp --HHHHHS--CTTEEEEECSCGGGBCHHHHHHHHHH
T ss_pred --HHHhhC--CCCcEEEECCCCcccCHHHHHHHHHh
Confidence 123322 26789999999988888888888865
No 119
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=99.10 E-value=7.2e-11 Score=109.64 Aligned_cols=108 Identities=19% Similarity=0.171 Sum_probs=84.6
Q ss_pred CCCCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHHHHhcC
Q 018506 42 SCQFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNG 121 (355)
Q Consensus 42 ~~~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl~~ 121 (355)
....++|||||+|.||..+|+.|...|++|++|||+++. . .+.+... .++++++++||+|++++|...+++.++..
T Consensus 145 ~l~gktvgIiGlG~IG~~vA~~l~~~G~~V~~~d~~~~~--~-~~~~~~~-~~l~ell~~aDvV~l~~Plt~~t~~li~~ 220 (343)
T 2yq5_A 145 EIYNLTVGLIGVGHIGSAVAEIFSAMGAKVIAYDVAYNP--E-FEPFLTY-TDFDTVLKEADIVSLHTPLFPSTENMIGE 220 (343)
T ss_dssp CGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCG--G-GTTTCEE-CCHHHHHHHCSEEEECCCCCTTTTTCBCH
T ss_pred ccCCCeEEEEecCHHHHHHHHHHhhCCCEEEEECCChhh--h-hhccccc-cCHHHHHhcCCEEEEcCCCCHHHHHHhhH
Confidence 345689999999999999999999999999999998765 1 2223333 38999999999999999977666665532
Q ss_pred CCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhh
Q 018506 122 PNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSN 157 (355)
Q Consensus 122 ~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~ 157 (355)
..++.+ .++.++||++.+.+...+.+.+.+.+
T Consensus 221 --~~l~~m--k~gailIN~aRg~~vd~~aL~~aL~~ 252 (343)
T 2yq5_A 221 --KQLKEM--KKSAYLINCARGELVDTGALIKALQD 252 (343)
T ss_dssp --HHHHHS--CTTCEEEECSCGGGBCHHHHHHHHHH
T ss_pred --HHHhhC--CCCcEEEECCCChhhhHHHHHHHHHc
Confidence 233332 36789999999998888888888864
No 120
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=99.10 E-value=1.6e-10 Score=108.11 Aligned_cols=110 Identities=20% Similarity=0.195 Sum_probs=85.8
Q ss_pred CCCCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHHHHhcC
Q 018506 42 SCQFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNG 121 (355)
Q Consensus 42 ~~~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl~~ 121 (355)
...-++|||||+|.||..+|+.+...|++|++|||++. .+...+.|+.. .+++++++.+|+|++++|...+++.++..
T Consensus 173 ~l~gktvGIIGlG~IG~~vA~~l~~fG~~V~~~d~~~~-~~~~~~~g~~~-~~l~ell~~aDvV~l~~Plt~~T~~li~~ 250 (365)
T 4hy3_A 173 LIAGSEIGIVGFGDLGKALRRVLSGFRARIRVFDPWLP-RSMLEENGVEP-ASLEDVLTKSDFIFVVAAVTSENKRFLGA 250 (365)
T ss_dssp CSSSSEEEEECCSHHHHHHHHHHTTSCCEEEEECSSSC-HHHHHHTTCEE-CCHHHHHHSCSEEEECSCSSCC---CCCH
T ss_pred ccCCCEEEEecCCcccHHHHHhhhhCCCEEEEECCCCC-HHHHhhcCeee-CCHHHHHhcCCEEEEcCcCCHHHHhhcCH
Confidence 34557999999999999999999999999999999853 34445566654 58999999999999999988777776532
Q ss_pred CCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhh
Q 018506 122 PNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSN 157 (355)
Q Consensus 122 ~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~ 157 (355)
+.++.+ .++.++||++.+.+...+.+.+.+.+
T Consensus 251 --~~l~~m--k~gailIN~aRG~~vde~aL~~aL~~ 282 (365)
T 4hy3_A 251 --EAFSSM--RRGAAFILLSRADVVDFDALMAAVSS 282 (365)
T ss_dssp --HHHHTS--CTTCEEEECSCGGGSCHHHHHHHHHT
T ss_pred --HHHhcC--CCCcEEEECcCCchhCHHHHHHHHHc
Confidence 244432 36789999999998888888888864
No 121
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=99.07 E-value=1.5e-10 Score=109.77 Aligned_cols=117 Identities=16% Similarity=0.207 Sum_probs=86.2
Q ss_pred ccccCCCC--CCCCCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCC
Q 018506 33 RRFFSSQV--PSCQFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLP 110 (355)
Q Consensus 33 ~~~~~~~~--~~~~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~ 110 (355)
..|..... ....-++|||||+|.||..+|+.+...|++|++||+++... ..+.....+++++++.||+|++++|
T Consensus 142 g~W~~~~~~~~el~gktvGIIGlG~IG~~vA~~l~~~G~~V~~yd~~~~~~----~~~~~~~~sl~ell~~aDvV~lhvP 217 (416)
T 3k5p_A 142 GGWEKTAIGSREVRGKTLGIVGYGNIGSQVGNLAESLGMTVRYYDTSDKLQ----YGNVKPAASLDELLKTSDVVSLHVP 217 (416)
T ss_dssp TCCCCCCTTCCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCCCC----BTTBEECSSHHHHHHHCSEEEECCC
T ss_pred ccccccCCCCccCCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCcchhc----ccCcEecCCHHHHHhhCCEEEEeCC
Confidence 36665532 23445799999999999999999999999999999975321 1234456799999999999999999
Q ss_pred CchHHHHHhcCCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhh
Q 018506 111 SSSHVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSN 157 (355)
Q Consensus 111 ~~~~~~~vl~~~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~ 157 (355)
...+++.++.. +.++.+ .++.++||++.+.+...+.+.+.+.+
T Consensus 218 lt~~T~~li~~--~~l~~m--k~gailIN~aRG~vvd~~aL~~aL~~ 260 (416)
T 3k5p_A 218 SSKSTSKLITE--AKLRKM--KKGAFLINNARGSDVDLEALAKVLQE 260 (416)
T ss_dssp C-----CCBCH--HHHHHS--CTTEEEEECSCTTSBCHHHHHHHHHT
T ss_pred CCHHHhhhcCH--HHHhhC--CCCcEEEECCCChhhhHHHHHHHHHc
Confidence 87777766532 234332 36789999999998888888888864
No 122
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=99.06 E-value=1.3e-10 Score=110.51 Aligned_cols=117 Identities=15% Similarity=0.105 Sum_probs=88.3
Q ss_pred ccccCCC--CCCCCCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCC
Q 018506 33 RRFFSSQ--VPSCQFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLP 110 (355)
Q Consensus 33 ~~~~~~~--~~~~~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~ 110 (355)
..|.+.. .....-++|||||+|.||..+|+++...|++|++|||++... ..++....+++++++.||+|++++|
T Consensus 131 g~W~~~~~~~~el~gktlGiIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~----~~~~~~~~~l~ell~~aDvV~l~~P 206 (404)
T 1sc6_A 131 GVGNKLAAGSFEARGKKLGIIGYGHIGTQLGILAESLGMYVYFYDIENKLP----LGNATQVQHLSDLLNMSDVVSLHVP 206 (404)
T ss_dssp TCCC-----CCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCC----CTTCEECSCHHHHHHHCSEEEECCC
T ss_pred CCccccCCCccccCCCEEEEEeECHHHHHHHHHHHHCCCEEEEEcCCchhc----cCCceecCCHHHHHhcCCEEEEccC
Confidence 3665432 223456899999999999999999999999999999976431 1234556689999999999999999
Q ss_pred CchHHHHHhcCCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhh
Q 018506 111 SSSHVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSN 157 (355)
Q Consensus 111 ~~~~~~~vl~~~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~ 157 (355)
...+++.++.. +.++.+ .++.++||++++.+...+.+.+.+.+
T Consensus 207 ~t~~t~~li~~--~~l~~m--k~ga~lIN~aRg~~vd~~aL~~aL~~ 249 (404)
T 1sc6_A 207 ENPSTKNMMGA--KEISLM--KPGSLLINASRGTVVDIPALADALAS 249 (404)
T ss_dssp SSTTTTTCBCH--HHHHHS--CTTEEEEECSCSSSBCHHHHHHHHHT
T ss_pred CChHHHHHhhH--HHHhhc--CCCeEEEECCCChHHhHHHHHHHHHc
Confidence 88777766532 234332 36789999999998877888888764
No 123
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=99.01 E-value=1.6e-10 Score=108.29 Aligned_cols=106 Identities=18% Similarity=0.221 Sum_probs=82.6
Q ss_pred CCCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchH----HHHH
Q 018506 43 CQFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSH----VLDV 118 (355)
Q Consensus 43 ~~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~----~~~v 118 (355)
...++|||||+|+||..+|++|...|++|.+||++.+.. . ......++++++++||+|++++|...+ ++.+
T Consensus 117 l~gktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~~----~-~~~~~~sl~ell~~aDiV~l~~Plt~~g~~~T~~l 191 (381)
T 3oet_A 117 LRDRTIGIVGVGNVGSRLQTRLEALGIRTLLCDPPRAAR----G-DEGDFRTLDELVQEADVLTFHTPLYKDGPYKTLHL 191 (381)
T ss_dssp GGGCEEEEECCSHHHHHHHHHHHHTTCEEEEECHHHHHT----T-CCSCBCCHHHHHHHCSEEEECCCCCCSSTTCCTTS
T ss_pred cCCCEEEEEeECHHHHHHHHHHHHCCCEEEEECCChHHh----c-cCcccCCHHHHHhhCCEEEEcCcCCccccccchhh
Confidence 345789999999999999999999999999999854322 1 233456899999999999999997655 5555
Q ss_pred hcCCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhh
Q 018506 119 YNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSN 157 (355)
Q Consensus 119 l~~~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~ 157 (355)
+.. +.++.+ .++.++||++.+.+...+.+.+.+.+
T Consensus 192 i~~--~~l~~m--k~gailIN~aRG~vvde~aL~~aL~~ 226 (381)
T 3oet_A 192 ADE--TLIRRL--KPGAILINACRGPVVDNAALLARLNA 226 (381)
T ss_dssp BCH--HHHHHS--CTTEEEEECSCGGGBCHHHHHHHHHT
T ss_pred cCH--HHHhcC--CCCcEEEECCCCcccCHHHHHHHHHh
Confidence 432 234332 36789999999998888888888864
No 124
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=99.01 E-value=2.2e-10 Score=106.32 Aligned_cols=108 Identities=13% Similarity=0.094 Sum_probs=84.0
Q ss_pred CCCCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHHHHhcC
Q 018506 42 SCQFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNG 121 (355)
Q Consensus 42 ~~~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl~~ 121 (355)
....++|||||+|.||..+|+.|...|++|++|||++++. + +..+. ..+++++++.+|+|++++|...+++.++..
T Consensus 142 ~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~-~~~~~-~~~l~ell~~aDvV~~~~P~~~~t~~li~~ 217 (333)
T 1dxy_A 142 ELGQQTVGVMGTGHIGQVAIKLFKGFGAKVIAYDPYPMKG--D-HPDFD-YVSLEDLFKQSDVIDLHVPGIEQNTHIINE 217 (333)
T ss_dssp CGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSS--C-CTTCE-ECCHHHHHHHCSEEEECCCCCGGGTTSBCH
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCcchh--h-Hhccc-cCCHHHHHhcCCEEEEcCCCchhHHHHhCH
Confidence 4456899999999999999999999999999999987643 1 12222 348899999999999999988766665531
Q ss_pred CCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhh
Q 018506 122 PNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSN 157 (355)
Q Consensus 122 ~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~ 157 (355)
..++.+ .++.++||++++.+...+.+.+.+.+
T Consensus 218 --~~l~~m--k~ga~lIn~srg~~vd~~aL~~aL~~ 249 (333)
T 1dxy_A 218 --AAFNLM--KPGAIVINTARPNLIDTQAMLSNLKS 249 (333)
T ss_dssp --HHHHHS--CTTEEEEECSCTTSBCHHHHHHHHHT
T ss_pred --HHHhhC--CCCcEEEECCCCcccCHHHHHHHHHh
Confidence 233332 26789999999998887888888864
No 125
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=99.00 E-value=2.9e-10 Score=105.50 Aligned_cols=108 Identities=19% Similarity=0.155 Sum_probs=83.2
Q ss_pred CCCCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHHHHhcC
Q 018506 42 SCQFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNG 121 (355)
Q Consensus 42 ~~~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl~~ 121 (355)
....++|||||+|.||..+|+.|...|++|++|||++++. + +..+. ..+++++++.+|+|++++|....++.++..
T Consensus 143 ~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~-~~~~~-~~~l~ell~~aDvV~~~~p~t~~t~~li~~ 218 (331)
T 1xdw_A 143 EVRNCTVGVVGLGRIGRVAAQIFHGMGATVIGEDVFEIKG--I-EDYCT-QVSLDEVLEKSDIITIHAPYIKENGAVVTR 218 (331)
T ss_dssp CGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCS--C-TTTCE-ECCHHHHHHHCSEEEECCCCCTTTCCSBCH
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCccHH--H-Hhccc-cCCHHHHHhhCCEEEEecCCchHHHHHhCH
Confidence 3455899999999999999999999999999999987653 2 22222 348999999999999999987665554431
Q ss_pred CCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhh
Q 018506 122 PNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSN 157 (355)
Q Consensus 122 ~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~ 157 (355)
..++.+ .++.++||++++.+...+.+.+.+.+
T Consensus 219 --~~l~~m--k~ga~lin~srg~~vd~~aL~~aL~~ 250 (331)
T 1xdw_A 219 --DFLKKM--KDGAILVNCARGQLVDTEAVIEAVES 250 (331)
T ss_dssp --HHHHTS--CTTEEEEECSCGGGBCHHHHHHHHHH
T ss_pred --HHHhhC--CCCcEEEECCCcccccHHHHHHHHHh
Confidence 233332 36789999999988887888888864
No 126
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=98.97 E-value=4.8e-10 Score=105.28 Aligned_cols=106 Identities=15% Similarity=0.148 Sum_probs=82.4
Q ss_pred CCCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchH----HHHH
Q 018506 43 CQFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSH----VLDV 118 (355)
Q Consensus 43 ~~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~----~~~v 118 (355)
...++|||||+|+||..+|++|...|++|++||++++.. +.+. ...++++++++||+|++++|...+ ++.+
T Consensus 114 l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~----~~g~-~~~~l~ell~~aDvV~l~~Plt~~g~~~T~~l 188 (380)
T 2o4c_A 114 LAERTYGVVGAGQVGGRLVEVLRGLGWKVLVCDPPRQAR----EPDG-EFVSLERLLAEADVISLHTPLNRDGEHPTRHL 188 (380)
T ss_dssp GGGCEEEEECCSHHHHHHHHHHHHTTCEEEEECHHHHHH----STTS-CCCCHHHHHHHCSEEEECCCCCSSSSSCCTTS
T ss_pred cCCCEEEEEeCCHHHHHHHHHHHHCCCEEEEEcCChhhh----ccCc-ccCCHHHHHHhCCEEEEeccCccccccchhhh
Confidence 455789999999999999999999999999999876542 2333 346899999999999999998755 5554
Q ss_pred hcCCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhh
Q 018506 119 YNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSN 157 (355)
Q Consensus 119 l~~~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~ 157 (355)
+. .+.++.+ .++.++||++++.+...+.+.+.+.+
T Consensus 189 i~--~~~l~~m--k~gailIN~sRG~vvd~~aL~~aL~~ 223 (380)
T 2o4c_A 189 LD--EPRLAAL--RPGTWLVNASRGAVVDNQALRRLLEG 223 (380)
T ss_dssp BC--HHHHHTS--CTTEEEEECSCGGGBCHHHHHHHHHT
T ss_pred cC--HHHHhhC--CCCcEEEECCCCcccCHHHHHHHHHh
Confidence 43 1234432 36789999999988877888888764
No 127
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=98.93 E-value=3e-09 Score=97.86 Aligned_cols=68 Identities=26% Similarity=0.285 Sum_probs=56.0
Q ss_pred CceEEEEcccHHhHHHHHHHHHCC--CcEEEEeCChhHHHHHHh-C---------CCCC-CCCHHHHhhcCCEEEEeCCC
Q 018506 45 FESVGFIGLGNMGFRMASNLMKAG--YKMAVHDVNCNVMKMFSD-M---------GVPT-KETPFEVAEASDVVITMLPS 111 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~~G--~~V~v~dr~~~~~~~l~~-~---------g~~~-~~s~~e~~~~aDiVi~~v~~ 111 (355)
||||+|||+|.||.+++..|+++| ++|++|||++++++.+.. . .... +++. ++++++|+||++++.
T Consensus 1 m~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~-~~~~~aDvViiav~~ 79 (309)
T 1hyh_A 1 ARKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW-AALADADVVISTLGN 79 (309)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG-GGGTTCSEEEECCSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCCH-HHhCCCCEEEEecCC
Confidence 479999999999999999999999 899999999988766542 1 1232 3566 778899999999998
Q ss_pred ch
Q 018506 112 SS 113 (355)
Q Consensus 112 ~~ 113 (355)
+.
T Consensus 80 ~~ 81 (309)
T 1hyh_A 80 IK 81 (309)
T ss_dssp GG
T ss_pred cc
Confidence 65
No 128
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=98.88 E-value=3.1e-09 Score=86.35 Aligned_cols=88 Identities=19% Similarity=0.256 Sum_probs=68.6
Q ss_pred CceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHh-CCCC--CCCCHHHHhhcCCEEEEeCCCchHHHHHhcC
Q 018506 45 FESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSD-MGVP--TKETPFEVAEASDVVITMLPSSSHVLDVYNG 121 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~-~g~~--~~~s~~e~~~~aDiVi~~v~~~~~~~~vl~~ 121 (355)
.++|+|||+|.||..++..|.+.|++|++|+|++++.+.+.+ .+.. ..++..++++++|+||.|+|.+.. ++.
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~~~~~~~~~~~~~~~Divi~at~~~~~---~~~- 96 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEYVLINDIDSLIKNNDVIITATSSKTP---IVE- 96 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEEEECSCHHHHHHTCSEEEECSCCSSC---SBC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCceEeecCHHHHhcCCCEEEEeCCCCCc---Eee-
Confidence 478999999999999999999999999999999999888765 3433 456888899999999999997622 111
Q ss_pred CCccccCCCCCCCeEEEEcCC
Q 018506 122 PNGLLQGGNSVRPQLLIDSST 142 (355)
Q Consensus 122 ~~~~l~~~~~~~~~ivi~~st 142 (355)
...++ ++.+++|.+.
T Consensus 97 -~~~l~-----~g~~vid~~~ 111 (144)
T 3oj0_A 97 -ERSLM-----PGKLFIDLGN 111 (144)
T ss_dssp -GGGCC-----TTCEEEECCS
T ss_pred -HHHcC-----CCCEEEEccC
Confidence 12332 4568888865
No 129
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=98.87 E-value=3.5e-09 Score=96.91 Aligned_cols=95 Identities=20% Similarity=0.286 Sum_probs=72.7
Q ss_pred CCCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCC--CCCHHHHhhcCCEEEEeCCCchHHHHHhc
Q 018506 43 CQFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPT--KETPFEVAEASDVVITMLPSSSHVLDVYN 120 (355)
Q Consensus 43 ~~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~--~~s~~e~~~~aDiVi~~v~~~~~~~~vl~ 120 (355)
...++|+|||+|.||..+++.|...|++|++|||++++.+.+.+.|+.. ..+++++++.+|+|++++|....-+..
T Consensus 155 l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~~~l~~~l~~aDvVi~~~p~~~i~~~~-- 232 (300)
T 2rir_A 155 IHGSQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARITEMGLVPFHTDELKEHVKDIDICINTIPSMILNQTV-- 232 (300)
T ss_dssp STTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCEEEEGGGHHHHSTTCSEEEECCSSCCBCHHH--
T ss_pred CCCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCeEEchhhHHHHhhCCCEEEECCChhhhCHHH--
Confidence 4558999999999999999999999999999999998877776666543 257888889999999999963111122
Q ss_pred CCCccccCCCCCCCeEEEEcCCCCHH
Q 018506 121 GPNGLLQGGNSVRPQLLIDSSTIDPQ 146 (355)
Q Consensus 121 ~~~~~l~~~~~~~~~ivi~~st~~~~ 146 (355)
++. ..++.++||++.....
T Consensus 233 -----~~~--mk~g~~lin~a~g~~~ 251 (300)
T 2rir_A 233 -----LSS--MTPKTLILDLASRPGG 251 (300)
T ss_dssp -----HTT--SCTTCEEEECSSTTCS
T ss_pred -----HHh--CCCCCEEEEEeCCCCC
Confidence 222 1256799999986443
No 130
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=98.86 E-value=4.5e-09 Score=95.02 Aligned_cols=93 Identities=15% Similarity=0.160 Sum_probs=71.1
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhC-CCCCCCCHHHHhhcCCEEEEeCCCchHHHHHhcCC
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDM-GVPTKETPFEVAEASDVVITMLPSSSHVLDVYNGP 122 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~-g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl~~~ 122 (355)
..++|+|||+|.||.+++..|.+.|++|++|||++++++.+.+. ++...+++.++++++|+||.|+|.... .++...+
T Consensus 128 ~~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~~aDiVi~atp~~~~-~~~~~~i 206 (275)
T 2hk9_A 128 KEKSILVLGAGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFPLEVVNSPEEVIDKVQVIVNTTSVGLK-DEDPEIF 206 (275)
T ss_dssp GGSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTSCEEECSCGGGTGGGCSEEEECSSTTSS-TTCCCSS
T ss_pred CCCEEEEECchHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHcCCeeehhHHhhhcCCCEEEEeCCCCCC-CCCCCCC
Confidence 34789999999999999999999999999999999998888753 555555788888999999999997631 1111111
Q ss_pred C-ccccCCCCCCCeEEEEcCC
Q 018506 123 N-GLLQGGNSVRPQLLIDSST 142 (355)
Q Consensus 123 ~-~~l~~~~~~~~~ivi~~st 142 (355)
. ..+ .++++++|++.
T Consensus 207 ~~~~l-----~~g~~viDv~~ 222 (275)
T 2hk9_A 207 NYDLI-----KKDHVVVDIIY 222 (275)
T ss_dssp CGGGC-----CTTSEEEESSS
T ss_pred CHHHc-----CCCCEEEEcCC
Confidence 1 122 25679999988
No 131
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=98.82 E-value=2e-08 Score=92.15 Aligned_cols=107 Identities=13% Similarity=0.154 Sum_probs=80.4
Q ss_pred CCCceEEEEcccHHhHH-HHHHHHH-CCCcEE-EEeCChhHHHHHHh-CCCCCCCCHHHHhhcCCEEEEeCCCchHHHHH
Q 018506 43 CQFESVGFIGLGNMGFR-MASNLMK-AGYKMA-VHDVNCNVMKMFSD-MGVPTKETPFEVAEASDVVITMLPSSSHVLDV 118 (355)
Q Consensus 43 ~~~mkIgiIG~G~mG~~-ia~~L~~-~G~~V~-v~dr~~~~~~~l~~-~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~v 118 (355)
|+++||||||+|.||.. ++..|.+ .+.++. ++|+++++++.+.+ .|+...++.++++++.|+|++|+|+....+.+
T Consensus 4 M~~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~~~~~~~~ll~~~D~V~i~tp~~~h~~~~ 83 (308)
T 3uuw_A 4 MKNIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTPNKVKREKICSDYRIMPFDSIESLAKKCDCIFLHSSTETHYEII 83 (308)
T ss_dssp -CCCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECSCHHHHHHHHHHHTCCBCSCHHHHHTTCSEEEECCCGGGHHHHH
T ss_pred cccCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCCcCCHHHHHhcCCEEEEeCCcHhHHHHH
Confidence 56789999999999996 8888887 466765 89999999988876 46767889999999999999999988665554
Q ss_pred hcCCCccccCCCCCCCeEEEE-cCCCCHHHHHHHHHHHhh
Q 018506 119 YNGPNGLLQGGNSVRPQLLID-SSTIDPQTSRNISAAVSN 157 (355)
Q Consensus 119 l~~~~~~l~~~~~~~~~ivi~-~st~~~~~~~~l~~~~~~ 157 (355)
.. .++. +..++++ ..+..+.+.+++.+...+
T Consensus 84 ~~----al~~----gk~vl~EKP~~~~~~~~~~l~~~a~~ 115 (308)
T 3uuw_A 84 KI----LLNL----GVHVYVDKPLASTVSQGEELIELSTK 115 (308)
T ss_dssp HH----HHHT----TCEEEECSSSSSSHHHHHHHHHHHHH
T ss_pred HH----HHHC----CCcEEEcCCCCCCHHHHHHHHHHHHH
Confidence 43 3332 2235555 456677777887776653
No 132
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=98.80 E-value=2.7e-08 Score=93.12 Aligned_cols=111 Identities=14% Similarity=0.148 Sum_probs=82.4
Q ss_pred CCCCCCCCceEEEEcccHHhHHHHHHHHHC--CCcE-EEEeCChhHHHHHHh-CCCCCCCCHHHHhh--cCCEEEEeCCC
Q 018506 38 SQVPSCQFESVGFIGLGNMGFRMASNLMKA--GYKM-AVHDVNCNVMKMFSD-MGVPTKETPFEVAE--ASDVVITMLPS 111 (355)
Q Consensus 38 ~~~~~~~~mkIgiIG~G~mG~~ia~~L~~~--G~~V-~v~dr~~~~~~~l~~-~g~~~~~s~~e~~~--~aDiVi~~v~~ 111 (355)
.+|..++++||||||+|.||..++..|.+. ++++ .++|+++++++.+.+ .++...++.+++++ +.|+|++|+|+
T Consensus 6 ~~m~~~~~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~ 85 (354)
T 3q2i_A 6 IPPITDRKIRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTGARGHASLTDMLAQTDADIVILTTPS 85 (354)
T ss_dssp CCCCCSSCEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHHCCEEESCHHHHHHHCCCSEEEECSCG
T ss_pred eecCCCCcceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHcCCceeCCHHHHhcCCCCCEEEECCCc
Confidence 345556778999999999999999999987 6775 488999999988765 47777889999987 79999999998
Q ss_pred chHHHHHhcCCCccccCCCCCCCeEEEEc-CCCCHHHHHHHHHHHh
Q 018506 112 SSHVLDVYNGPNGLLQGGNSVRPQLLIDS-STIDPQTSRNISAAVS 156 (355)
Q Consensus 112 ~~~~~~vl~~~~~~l~~~~~~~~~ivi~~-st~~~~~~~~l~~~~~ 156 (355)
....+.+.. .+.. +..++++. .+..+.+.+++.+...
T Consensus 86 ~~h~~~~~~----al~~----gk~v~~EKP~a~~~~~~~~l~~~a~ 123 (354)
T 3q2i_A 86 GLHPTQSIE----CSEA----GFHVMTEKPMATRWEDGLEMVKAAD 123 (354)
T ss_dssp GGHHHHHHH----HHHT----TCEEEECSSSCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHH----HHHC----CCCEEEeCCCcCCHHHHHHHHHHHH
Confidence 766555443 2322 12355543 2456777777776654
No 133
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=98.79 E-value=1.2e-08 Score=91.47 Aligned_cols=98 Identities=12% Similarity=0.070 Sum_probs=71.4
Q ss_pred eEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhC-CCCCCCCHHHHhhcCCEEEEeCCCchH--HHHHhcCCC
Q 018506 47 SVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDM-GVPTKETPFEVAEASDVVITMLPSSSH--VLDVYNGPN 123 (355)
Q Consensus 47 kIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~-g~~~~~s~~e~~~~aDiVi~~v~~~~~--~~~vl~~~~ 123 (355)
+|+|||+|.||.+++..|.+.|++|++|||++++++.+.+. +.. .+++.++ +++|+||+|+|.... +...+. .
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~~~-~~~~~~~-~~~Divi~~tp~~~~~~~~~~l~--~ 193 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRTPQRALALAEEFGLR-AVPLEKA-REARLLVNATRVGLEDPSASPLP--A 193 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHTCE-ECCGGGG-GGCSEEEECSSTTTTCTTCCSSC--G
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccc-hhhHhhc-cCCCEEEEccCCCCCCCCCCCCC--H
Confidence 89999999999999999999999999999999988877652 443 4577788 899999999997621 111111 1
Q ss_pred ccccCCCCCCCeEEEEcCCCCHHHHHHHHHHH
Q 018506 124 GLLQGGNSVRPQLLIDSSTIDPQTSRNISAAV 155 (355)
Q Consensus 124 ~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~ 155 (355)
..+ .++++++|++.....+ .+.+..
T Consensus 194 ~~l-----~~g~~viD~~~~p~~t--~l~~~a 218 (263)
T 2d5c_A 194 ELF-----PEEGAAVDLVYRPLWT--RFLREA 218 (263)
T ss_dssp GGS-----CSSSEEEESCCSSSSC--HHHHHH
T ss_pred HHc-----CCCCEEEEeecCCccc--HHHHHH
Confidence 122 2467899998874332 344444
No 134
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=98.78 E-value=7.3e-09 Score=95.58 Aligned_cols=93 Identities=17% Similarity=0.124 Sum_probs=66.3
Q ss_pred CceEEEEcccHHhHHHHHHHHHCCC-cEEEEeCChhHHHHHH----h------CC--CCCCCCHHHHhhcCCEEEEeCCC
Q 018506 45 FESVGFIGLGNMGFRMASNLMKAGY-KMAVHDVNCNVMKMFS----D------MG--VPTKETPFEVAEASDVVITMLPS 111 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~~G~-~V~v~dr~~~~~~~l~----~------~g--~~~~~s~~e~~~~aDiVi~~v~~ 111 (355)
.|||+|||+|.||+++|..|+.+|+ +|++||+++++++... . .. +..+++. ++++++|+||++++.
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~-~a~~~aDiVi~avg~ 82 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGTDDY-ADISGSDVVIITASI 82 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeCCC
Confidence 4799999999999999999999999 9999999988776531 1 11 2233566 778899999999932
Q ss_pred c---------------hHHHHHhcCCCccccCCCCCCCeEEEEcCCCC
Q 018506 112 S---------------SHVLDVYNGPNGLLQGGNSVRPQLLIDSSTID 144 (355)
Q Consensus 112 ~---------------~~~~~vl~~~~~~l~~~~~~~~~ivi~~st~~ 144 (355)
+ ...++++..+.+.. ++.+++..|+..
T Consensus 83 p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~------~~~iii~~sNp~ 124 (317)
T 2ewd_A 83 PGRPKDDRSELLFGNARILDSVAEGVKKYC------PNAFVICITNPL 124 (317)
T ss_dssp SSCCSSCGGGGHHHHHHHHHHHHHHHHHHC------TTSEEEECCSSH
T ss_pred CCCCCCcHHHHHHhhHHHHHHHHHHHHHHC------CCcEEEEeCChH
Confidence 2 23455555543332 345777777643
No 135
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=98.77 E-value=1e-08 Score=82.73 Aligned_cols=97 Identities=16% Similarity=0.341 Sum_probs=71.2
Q ss_pred CCceEEEEcc----cHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHHHHh
Q 018506 44 QFESVGFIGL----GNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVY 119 (355)
Q Consensus 44 ~~mkIgiIG~----G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl 119 (355)
...+|+|||+ |.||..++++|.+.||+|+.+|++.+.+ .|.....|+.|+.+..|++++++|. +.+.+++
T Consensus 13 ~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~i-----~G~~~~~s~~el~~~vDlvii~vp~-~~v~~v~ 86 (138)
T 1y81_A 13 EFRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEI-----EGLKCYRSVRELPKDVDVIVFVVPP-KVGLQVA 86 (138)
T ss_dssp -CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE-----TTEECBSSGGGSCTTCCEEEECSCH-HHHHHHH
T ss_pred CCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCeE-----CCeeecCCHHHhCCCCCEEEEEeCH-HHHHHHH
Confidence 4578999999 9999999999999999976666653222 5778888999998899999999995 6888877
Q ss_pred cCCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHh
Q 018506 120 NGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVS 156 (355)
Q Consensus 120 ~~~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~ 156 (355)
++. .+.. .+.+++++++.. +++.+...
T Consensus 87 ~~~---~~~g---~~~i~~~~~~~~----~~l~~~a~ 113 (138)
T 1y81_A 87 KEA---VEAG---FKKLWFQPGAES----EEIRRFLE 113 (138)
T ss_dssp HHH---HHTT---CCEEEECTTSCC----HHHHHHHH
T ss_pred HHH---HHcC---CCEEEEcCccHH----HHHHHHHH
Confidence 653 2211 235777776642 44544443
No 136
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=98.75 E-value=9.4e-09 Score=94.88 Aligned_cols=67 Identities=24% Similarity=0.313 Sum_probs=53.4
Q ss_pred ceEEEEcccHHhHHHHHHHHHCCC--cEEEEeCChhHHHHHHh---C------CCCC-CCCHHHHhhcCCEEEEeCCCch
Q 018506 46 ESVGFIGLGNMGFRMASNLMKAGY--KMAVHDVNCNVMKMFSD---M------GVPT-KETPFEVAEASDVVITMLPSSS 113 (355)
Q Consensus 46 mkIgiIG~G~mG~~ia~~L~~~G~--~V~v~dr~~~~~~~l~~---~------g~~~-~~s~~e~~~~aDiVi~~v~~~~ 113 (355)
|||+|||+|.||.+++..|+.+|+ +|++||+++++++.+.. . .... .++ .++++++|+||++++.+.
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~d-~~~~~~aDvViiav~~~~ 79 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD-YADLKGSDVVIVAAGVPQ 79 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC-GGGGTTCSEEEECCCCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEeCC-HHHhCCCCEEEEccCCCC
Confidence 699999999999999999999999 99999999988766542 1 1111 134 466789999999998653
No 137
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=98.72 E-value=2.3e-08 Score=92.74 Aligned_cols=66 Identities=18% Similarity=0.129 Sum_probs=54.2
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCC-cEEEEeCChhHHHHHH----h----C----CCCCCCCHHHHhhcCCEEEEeC
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGY-KMAVHDVNCNVMKMFS----D----M----GVPTKETPFEVAEASDVVITML 109 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~-~V~v~dr~~~~~~~l~----~----~----g~~~~~s~~e~~~~aDiVi~~v 109 (355)
..|||+|||+|.||+++|..|+..|+ +|++||+++++++... + . .+..+++.+++++++|+||+++
T Consensus 8 ~~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~~~aDiVi~a~ 86 (331)
T 1pzg_A 8 RRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVIVTA 86 (331)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHhCCCCEEEEcc
Confidence 45899999999999999999999999 9999999998776521 1 1 1223578887899999999998
No 138
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=98.72 E-value=7.8e-08 Score=89.57 Aligned_cols=106 Identities=17% Similarity=0.245 Sum_probs=80.7
Q ss_pred CCceEEEEcccHHhHHHHHHHHHC-CCcEE-EEeCChhHHHHHHh-CCCCCCCCHHHHhh--cCCEEEEeCCCchHHHHH
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKA-GYKMA-VHDVNCNVMKMFSD-MGVPTKETPFEVAE--ASDVVITMLPSSSHVLDV 118 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~-G~~V~-v~dr~~~~~~~l~~-~g~~~~~s~~e~~~--~aDiVi~~v~~~~~~~~v 118 (355)
+++||||||+|.||..++..|.+. +++++ ++|+++++++.+.+ .|....++.+++++ +.|+|++|+|+....+.+
T Consensus 3 ~~~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~ 82 (344)
T 3euw_A 3 LTLRIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGAQRLAEANGAEAVASPDEVFARDDIDGIVIGSPTSTHVDLI 82 (344)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHTTTCEEESSHHHHTTCSCCCEEEECSCGGGHHHHH
T ss_pred CceEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCceeCCHHHHhcCCCCCEEEEeCCchhhHHHH
Confidence 357999999999999999999986 66755 88999999988776 46777889999998 899999999988666554
Q ss_pred hcCCCccccCCCCCCCeEEEEcC-CCCHHHHHHHHHHHhh
Q 018506 119 YNGPNGLLQGGNSVRPQLLIDSS-TIDPQTSRNISAAVSN 157 (355)
Q Consensus 119 l~~~~~~l~~~~~~~~~ivi~~s-t~~~~~~~~l~~~~~~ 157 (355)
.. .+.. +..++++.- +..+.+.+++.+...+
T Consensus 83 ~~----al~~----gk~v~~EKP~~~~~~~~~~l~~~a~~ 114 (344)
T 3euw_A 83 TR----AVER----GIPALCEKPIDLDIEMVRACKEKIGD 114 (344)
T ss_dssp HH----HHHT----TCCEEECSCSCSCHHHHHHHHHHHGG
T ss_pred HH----HHHc----CCcEEEECCCCCCHHHHHHHHHHHHh
Confidence 43 2332 123565543 5667777877776653
No 139
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=98.70 E-value=5.5e-08 Score=90.91 Aligned_cols=108 Identities=19% Similarity=0.235 Sum_probs=79.9
Q ss_pred CCCCceEEEEcccHHhH-HHHHHHHHC-CCcEE-EEeCChhHHHHHHh-CCCCCCCCHHHHhh--cCCEEEEeCCCchHH
Q 018506 42 SCQFESVGFIGLGNMGF-RMASNLMKA-GYKMA-VHDVNCNVMKMFSD-MGVPTKETPFEVAE--ASDVVITMLPSSSHV 115 (355)
Q Consensus 42 ~~~~mkIgiIG~G~mG~-~ia~~L~~~-G~~V~-v~dr~~~~~~~l~~-~g~~~~~s~~e~~~--~aDiVi~~v~~~~~~ 115 (355)
+|+++||||||+|.||. .++..|.+. +++|+ ++||++++++.+.+ .|+...++.+++++ +.|+|++|+|+....
T Consensus 24 ~m~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~~ll~~~~~D~V~i~tp~~~h~ 103 (350)
T 3rc1_A 24 NANPIRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERFGGEPVEGYPALLERDDVDAVYVPLPAVLHA 103 (350)
T ss_dssp --CCEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHHCSEEEESHHHHHTCTTCSEEEECCCGGGHH
T ss_pred CCCceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEEECCCcHHHH
Confidence 45678999999999998 799999887 67764 88999999988876 47777789999986 589999999988666
Q ss_pred HHHhcCCCccccCCCCCCCeEEEEcC-CCCHHHHHHHHHHHhh
Q 018506 116 LDVYNGPNGLLQGGNSVRPQLLIDSS-TIDPQTSRNISAAVSN 157 (355)
Q Consensus 116 ~~vl~~~~~~l~~~~~~~~~ivi~~s-t~~~~~~~~l~~~~~~ 157 (355)
+.+.. .++. +..++++.- +..+.+.+++.+...+
T Consensus 104 ~~~~~----al~a----Gk~Vl~EKP~a~~~~ea~~l~~~a~~ 138 (350)
T 3rc1_A 104 EWIDR----ALRA----GKHVLAEKPLTTDRPQAERLFAVARE 138 (350)
T ss_dssp HHHHH----HHHT----TCEEEEESSSCSSHHHHHHHHHHHHH
T ss_pred HHHHH----HHHC----CCcEEEeCCCCCCHHHHHHHHHHHHH
Confidence 55543 2332 223565543 5567777777776543
No 140
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=98.70 E-value=3.5e-08 Score=89.91 Aligned_cols=94 Identities=19% Similarity=0.306 Sum_probs=71.4
Q ss_pred CCCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCC--CCHHHHhhcCCEEEEeCCCchHHHHHhc
Q 018506 43 CQFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTK--ETPFEVAEASDVVITMLPSSSHVLDVYN 120 (355)
Q Consensus 43 ~~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~--~s~~e~~~~aDiVi~~v~~~~~~~~vl~ 120 (355)
...++|+|||+|.||..+++.|...|.+|++|||++++.+.+.+.|+... .++.++++.+|+|++++|....-+..+.
T Consensus 153 l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~l~~~l~~aDvVi~~~p~~~i~~~~l~ 232 (293)
T 3d4o_A 153 IHGANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLARIAEMGMEPFHISKAAQELRDVDVCINTIPALVVTANVLA 232 (293)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTSEEEEGGGHHHHTTTCSEEEECCSSCCBCHHHHH
T ss_pred CCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCeecChhhHHHHhcCCCEEEECCChHHhCHHHHH
Confidence 34578999999999999999999999999999999988776666665532 4678888999999999986321112221
Q ss_pred CCCccccCCCCCCCeEEEEcCCCCH
Q 018506 121 GPNGLLQGGNSVRPQLLIDSSTIDP 145 (355)
Q Consensus 121 ~~~~~l~~~~~~~~~ivi~~st~~~ 145 (355)
.+ .++.++||++....
T Consensus 233 ----~m-----k~~~~lin~ar~~~ 248 (293)
T 3d4o_A 233 ----EM-----PSHTFVIDLASKPG 248 (293)
T ss_dssp ----HS-----CTTCEEEECSSTTC
T ss_pred ----hc-----CCCCEEEEecCCCC
Confidence 12 24579999997543
No 141
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=98.70 E-value=9e-08 Score=88.68 Aligned_cols=104 Identities=16% Similarity=0.232 Sum_probs=79.3
Q ss_pred CceEEEEcccHHhHHHHHHHHHC-CCcEE-EEeCChhHHHHHHh-CCCCCCCCHHHHhh--cCCEEEEeCCCchHHHHHh
Q 018506 45 FESVGFIGLGNMGFRMASNLMKA-GYKMA-VHDVNCNVMKMFSD-MGVPTKETPFEVAE--ASDVVITMLPSSSHVLDVY 119 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~~-G~~V~-v~dr~~~~~~~l~~-~g~~~~~s~~e~~~--~aDiVi~~v~~~~~~~~vl 119 (355)
++||||||+|.||..++..|.+. +++++ ++|+++++++.+.+ .++. .++.+++++ +.|+|++|+|+....+.+.
T Consensus 3 ~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~ 81 (331)
T 4hkt_A 3 TVRFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGAYGCE-VRTIDAIEAAADIDAVVICTPTDTHADLIE 81 (331)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCE-ECCHHHHHHCTTCCEEEECSCGGGHHHHHH
T ss_pred ceEEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHHhCCC-cCCHHHHhcCCCCCEEEEeCCchhHHHHHH
Confidence 57999999999999999999985 67765 79999999988876 5677 889999987 7999999999876665544
Q ss_pred cCCCccccCCCCCCCeEEEEc-CCCCHHHHHHHHHHHhh
Q 018506 120 NGPNGLLQGGNSVRPQLLIDS-STIDPQTSRNISAAVSN 157 (355)
Q Consensus 120 ~~~~~~l~~~~~~~~~ivi~~-st~~~~~~~~l~~~~~~ 157 (355)
. .+.. +..++++. .+..+.+.+++.+...+
T Consensus 82 ~----al~~----gk~v~~EKP~~~~~~~~~~l~~~a~~ 112 (331)
T 4hkt_A 82 R----FARA----GKAIFCEKPIDLDAERVRACLKVVSD 112 (331)
T ss_dssp H----HHHT----TCEEEECSCSCSSHHHHHHHHHHHHH
T ss_pred H----HHHc----CCcEEEecCCCCCHHHHHHHHHHHHH
Confidence 3 2322 22355543 35667888888776653
No 142
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=98.70 E-value=8.5e-08 Score=88.86 Aligned_cols=107 Identities=9% Similarity=0.125 Sum_probs=80.2
Q ss_pred CCCceEEEEcccHHhHHHHHHHHHC-CCcEE-EEeCChhHHHHHHh-CCC-CCCCCHHHHhh--cCCEEEEeCCCchHHH
Q 018506 43 CQFESVGFIGLGNMGFRMASNLMKA-GYKMA-VHDVNCNVMKMFSD-MGV-PTKETPFEVAE--ASDVVITMLPSSSHVL 116 (355)
Q Consensus 43 ~~~mkIgiIG~G~mG~~ia~~L~~~-G~~V~-v~dr~~~~~~~l~~-~g~-~~~~s~~e~~~--~aDiVi~~v~~~~~~~ 116 (355)
++++||||||+|.||..++..|.+. +.+|+ ++|+++++++.+.+ .++ ...++.+++++ +.|+|++|+|+....+
T Consensus 3 m~~~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~ 82 (330)
T 3e9m_A 3 LDKIRYGIMSTAQIVPRFVAGLRESAQAEVRGIASRRLENAQKMAKELAIPVAYGSYEELCKDETIDIIYIPTYNQGHYS 82 (330)
T ss_dssp CCCEEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHHHHHHTTCCCCBSSHHHHHHCTTCSEEEECCCGGGHHH
T ss_pred CCeEEEEEECchHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHcCCCceeCCHHHHhcCCCCCEEEEcCCCHHHHH
Confidence 4568999999999999999999985 56765 78999999988766 466 57789999987 7999999999886665
Q ss_pred HHhcCCCccccCCCCCCCeEEEEcC-CCCHHHHHHHHHHHhh
Q 018506 117 DVYNGPNGLLQGGNSVRPQLLIDSS-TIDPQTSRNISAAVSN 157 (355)
Q Consensus 117 ~vl~~~~~~l~~~~~~~~~ivi~~s-t~~~~~~~~l~~~~~~ 157 (355)
.+.. .++. +..++++.- +..+.+.+++.+...+
T Consensus 83 ~~~~----al~~----gk~vl~EKP~~~~~~e~~~l~~~a~~ 116 (330)
T 3e9m_A 83 AAKL----ALSQ----GKPVLLEKPFTLNAAEAEELFAIAQE 116 (330)
T ss_dssp HHHH----HHHT----TCCEEECSSCCSSHHHHHHHHHHHHH
T ss_pred HHHH----HHHC----CCeEEEeCCCCCCHHHHHHHHHHHHH
Confidence 5443 2322 123565543 5567777777776643
No 143
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=98.69 E-value=3.2e-08 Score=92.33 Aligned_cols=103 Identities=15% Similarity=0.121 Sum_probs=76.7
Q ss_pred CCceEEEEcccHHhHHHHHHHHH--CCCcEEEEeCChhHHHHHHhC-----C--CCCCCCHHHHhhcCCEEEEeCCCchH
Q 018506 44 QFESVGFIGLGNMGFRMASNLMK--AGYKMAVHDVNCNVMKMFSDM-----G--VPTKETPFEVAEASDVVITMLPSSSH 114 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~--~G~~V~v~dr~~~~~~~l~~~-----g--~~~~~s~~e~~~~aDiVi~~v~~~~~ 114 (355)
...+|+|||+|.||..++..|.. ...+|.+|||++++++++.+. + +..+++++++++++|+||+|+|+. .
T Consensus 128 ~~~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~~~~a~~la~~~~~~~g~~~~~~~~~~eav~~aDiVi~aTps~-~ 206 (350)
T 1x7d_A 128 NARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRASSVAEAVKGVDIITTVTADK-A 206 (350)
T ss_dssp TCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECSSHHHHHTTCSEEEECCCCS-S
T ss_pred cCCeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHhccCceEEEeCCHHHHHhcCCEEEEeccCC-C
Confidence 45789999999999999998864 346899999999999888763 4 345678999999999999999975 2
Q ss_pred HHHHhcCCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHH
Q 018506 115 VLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAV 155 (355)
Q Consensus 115 ~~~vl~~~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~ 155 (355)
...++.. .+++ +++.|+++++..|. .+++...+
T Consensus 207 ~~pvl~~--~~l~-----~G~~V~~vgs~~p~-~~El~~~~ 239 (350)
T 1x7d_A 207 YATIITP--DMLE-----PGMHLNAVGGDCPG-KTELHADV 239 (350)
T ss_dssp EEEEECG--GGCC-----TTCEEEECSCCBTT-BEEECHHH
T ss_pred CCceecH--HHcC-----CCCEEEECCCCCCC-ceeeCHHH
Confidence 2233321 2332 56789999998877 34454443
No 144
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=98.69 E-value=2.8e-08 Score=77.12 Aligned_cols=102 Identities=19% Similarity=0.206 Sum_probs=69.9
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCC-CcEEEEeCChhHHHHHHhCCCCC-------CCCHHHHhhcCCEEEEeCCCchHH
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAG-YKMAVHDVNCNVMKMFSDMGVPT-------KETPFEVAEASDVVITMLPSSSHV 115 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G-~~V~v~dr~~~~~~~l~~~g~~~-------~~s~~e~~~~aDiVi~~v~~~~~~ 115 (355)
.+++|.|+|+|.||..++..|.+.| ++|++++|++++.+.+...++.. ..+..++++.+|+||.++|.. ..
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~~~-~~ 82 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISAAPFF-LT 82 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEECSCGG-GH
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEECCCch-hh
Confidence 4578999999999999999999999 99999999999988887544321 123445667899999999754 33
Q ss_pred HHHhcCCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHH
Q 018506 116 LDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAV 155 (355)
Q Consensus 116 ~~vl~~~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~ 155 (355)
..++.. ..+ .+..+++.++. +...+.+.+..
T Consensus 83 ~~~~~~---~~~-----~g~~~~~~~~~-~~~~~~~~~~~ 113 (118)
T 3ic5_A 83 PIIAKA---AKA-----AGAHYFDLTED-VAATNAVRALV 113 (118)
T ss_dssp HHHHHH---HHH-----TTCEEECCCSC-HHHHHHHHHHH
T ss_pred HHHHHH---HHH-----hCCCEEEecCc-HHHHHHHHHHH
Confidence 333322 111 23456666553 44555555543
No 145
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=98.69 E-value=1e-07 Score=89.15 Aligned_cols=106 Identities=16% Similarity=0.260 Sum_probs=80.3
Q ss_pred CCceEEEEcccHHhHHHHHHHHHC-CCcE-EEEeCChhHHHHHHh-CCCCCCCCHHHHh--hcCCEEEEeCCCchHHHHH
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKA-GYKM-AVHDVNCNVMKMFSD-MGVPTKETPFEVA--EASDVVITMLPSSSHVLDV 118 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~-G~~V-~v~dr~~~~~~~l~~-~g~~~~~s~~e~~--~~aDiVi~~v~~~~~~~~v 118 (355)
+++||||||+|.||..++..|.+. ++++ .++|+++++++.+.+ .|+...++.++++ .+.|+|++|+|+....+.+
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~ 83 (354)
T 3db2_A 4 NPVGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRYNCAGDATMEALLAREDVEMVIITVPNDKHAEVI 83 (354)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHHTCCCCSSHHHHHHCSSCCEEEECSCTTSHHHHH
T ss_pred CcceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEEEeCChHHHHHHH
Confidence 457999999999999999999987 6775 488999999988765 4777788999998 5699999999998666655
Q ss_pred hcCCCccccCCCCCCCeEEEEcC-CCCHHHHHHHHHHHhh
Q 018506 119 YNGPNGLLQGGNSVRPQLLIDSS-TIDPQTSRNISAAVSN 157 (355)
Q Consensus 119 l~~~~~~l~~~~~~~~~ivi~~s-t~~~~~~~~l~~~~~~ 157 (355)
.. .++. +..++++.- +..+.+.+++.+...+
T Consensus 84 ~~----al~~----gk~vl~EKP~~~~~~~~~~l~~~a~~ 115 (354)
T 3db2_A 84 EQ----CARS----GKHIYVEKPISVSLDHAQRIDQVIKE 115 (354)
T ss_dssp HH----HHHT----TCEEEEESSSCSSHHHHHHHHHHHHH
T ss_pred HH----HHHc----CCEEEEccCCCCCHHHHHHHHHHHHH
Confidence 43 2332 223565543 5667777777776543
No 146
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.69 E-value=6.4e-08 Score=81.69 Aligned_cols=78 Identities=13% Similarity=0.158 Sum_probs=61.8
Q ss_pred CCCceEEEEcccHHhHHHHHHHHHC-CCcEEEEeCChhHHHHHHhCCCCCC----CCH---HHH--hhcCCEEEEeCCCc
Q 018506 43 CQFESVGFIGLGNMGFRMASNLMKA-GYKMAVHDVNCNVMKMFSDMGVPTK----ETP---FEV--AEASDVVITMLPSS 112 (355)
Q Consensus 43 ~~~mkIgiIG~G~mG~~ia~~L~~~-G~~V~v~dr~~~~~~~l~~~g~~~~----~s~---~e~--~~~aDiVi~~v~~~ 112 (355)
...++|.|+|+|.||..+++.|.+. |++|+++|+++++++.+.+.|+... ++. .++ ++++|+||++++++
T Consensus 37 ~~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~~~ 116 (183)
T 3c85_A 37 PGHAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAMPHH 116 (183)
T ss_dssp CTTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECCSSH
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCCCh
Confidence 3457899999999999999999999 9999999999999998888776532 222 233 56799999999987
Q ss_pred hHHHHHhc
Q 018506 113 SHVLDVYN 120 (355)
Q Consensus 113 ~~~~~vl~ 120 (355)
.....++.
T Consensus 117 ~~~~~~~~ 124 (183)
T 3c85_A 117 QGNQTALE 124 (183)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 65555443
No 147
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=98.66 E-value=6.6e-08 Score=88.82 Aligned_cols=66 Identities=21% Similarity=0.196 Sum_probs=53.0
Q ss_pred ceEEEEcccHHhHHHHHHHHHC--CCcEEEEeCChhHHHHHHh---C-------C--CCCCCCHHHHhhcCCEEEEeCCC
Q 018506 46 ESVGFIGLGNMGFRMASNLMKA--GYKMAVHDVNCNVMKMFSD---M-------G--VPTKETPFEVAEASDVVITMLPS 111 (355)
Q Consensus 46 mkIgiIG~G~mG~~ia~~L~~~--G~~V~v~dr~~~~~~~l~~---~-------g--~~~~~s~~e~~~~aDiVi~~v~~ 111 (355)
|||+|||+|.||.+++..|+.+ |++|++||+++++++.+.. . . +..+++.++ ++++|+||+++|.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~-l~~aDvViiav~~ 79 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYAD-TANSDIVIITAGL 79 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGG-GTTCSEEEECCSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEECCCHHH-HCCCCEEEEeCCC
Confidence 7999999999999999999985 7999999999988765431 1 1 223356655 8899999999976
Q ss_pred c
Q 018506 112 S 112 (355)
Q Consensus 112 ~ 112 (355)
+
T Consensus 80 p 80 (310)
T 1guz_A 80 P 80 (310)
T ss_dssp C
T ss_pred C
Confidence 5
No 148
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=98.65 E-value=5.1e-08 Score=89.74 Aligned_cols=105 Identities=15% Similarity=0.197 Sum_probs=77.1
Q ss_pred CCCceEEEEcccHHhHHHHHHHHHC-CCc-EEEEeCChhHHHHHHhCCCCCCCCHHHHhh--cCCEEEEeCCCchHHHHH
Q 018506 43 CQFESVGFIGLGNMGFRMASNLMKA-GYK-MAVHDVNCNVMKMFSDMGVPTKETPFEVAE--ASDVVITMLPSSSHVLDV 118 (355)
Q Consensus 43 ~~~mkIgiIG~G~mG~~ia~~L~~~-G~~-V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~--~aDiVi~~v~~~~~~~~v 118 (355)
++++||||||+|.||..++..|.+. +++ |.++|+++++++.+.+. +...++.+++++ ++|+|++|+|+....+.+
T Consensus 8 ~~~~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~~~~~~~~~~~~-~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~ 86 (315)
T 3c1a_A 8 NSPVRLALIGAGRWGKNYIRTIAGLPGAALVRLASSNPDNLALVPPG-CVIESDWRSVVSAPEVEAVIIATPPATHAEIT 86 (315)
T ss_dssp -CCEEEEEEECTTTTTTHHHHHHHCTTEEEEEEEESCHHHHTTCCTT-CEEESSTHHHHTCTTCCEEEEESCGGGHHHHH
T ss_pred CCcceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHhh-CcccCCHHHHhhCCCCCEEEEeCChHHHHHHH
Confidence 4568999999999999999999986 566 45899999988776655 556678889885 799999999987555444
Q ss_pred hcCCCccccCCCCCCCeEEEE-cCCCCHHHHHHHHHHHh
Q 018506 119 YNGPNGLLQGGNSVRPQLLID-SSTIDPQTSRNISAAVS 156 (355)
Q Consensus 119 l~~~~~~l~~~~~~~~~ivi~-~st~~~~~~~~l~~~~~ 156 (355)
.. .++. +..++++ ..+..+.+.+++.+...
T Consensus 87 ~~----al~~----Gk~v~~eKP~~~~~~~~~~l~~~a~ 117 (315)
T 3c1a_A 87 LA----AIAS----GKAVLVEKPLTLDLAEAEAVAAAAK 117 (315)
T ss_dssp HH----HHHT----TCEEEEESSSCSCHHHHHHHHHHHH
T ss_pred HH----HHHC----CCcEEEcCCCcCCHHHHHHHHHHHH
Confidence 32 2332 1236666 35566777777777654
No 149
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=98.64 E-value=1.9e-07 Score=75.32 Aligned_cols=75 Identities=13% Similarity=0.240 Sum_probs=59.3
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCC----CCHHHH----hhcCCEEEEeCCCchHH
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTK----ETPFEV----AEASDVVITMLPSSSHV 115 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~----~s~~e~----~~~aDiVi~~v~~~~~~ 115 (355)
...+|.|+|+|.+|..+++.|.+.|++|+++|+++++++.+.+.|.... ++.+.+ +.++|+||++++++...
T Consensus 6 ~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~~~~n 85 (140)
T 3fwz_A 6 ICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNGYEA 85 (140)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCSCHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECCChHHH
Confidence 3468999999999999999999999999999999999999888775421 222211 36899999999987544
Q ss_pred HHH
Q 018506 116 LDV 118 (355)
Q Consensus 116 ~~v 118 (355)
..+
T Consensus 86 ~~~ 88 (140)
T 3fwz_A 86 GEI 88 (140)
T ss_dssp HHH
T ss_pred HHH
Confidence 333
No 150
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=98.64 E-value=6.6e-08 Score=89.46 Aligned_cols=66 Identities=21% Similarity=0.200 Sum_probs=53.0
Q ss_pred CceEEEEcccHHhHHHHHHHHHCCC-cEEEEeCChhHHHHHH----h--------CCCCCCCCHHHHhhcCCEEEEeCCC
Q 018506 45 FESVGFIGLGNMGFRMASNLMKAGY-KMAVHDVNCNVMKMFS----D--------MGVPTKETPFEVAEASDVVITMLPS 111 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~~G~-~V~v~dr~~~~~~~l~----~--------~g~~~~~s~~e~~~~aDiVi~~v~~ 111 (355)
.|||+|||+|.||+++|..|+.+|+ +|++||+++++++... + ..+..+++. +++++||+||++++.
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~VI~avg~ 92 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENNY-EYLQNSDVVIITAGV 92 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEECCCH-HHHCCCCEEEEcCCC
Confidence 3799999999999999999999999 9999999998776421 1 013334566 788999999999843
No 151
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=98.64 E-value=1.4e-07 Score=75.98 Aligned_cols=69 Identities=17% Similarity=0.143 Sum_probs=55.0
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCC----CCCHHHH----hhcCCEEEEeCCCc
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPT----KETPFEV----AEASDVVITMLPSS 112 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~----~~s~~e~----~~~aDiVi~~v~~~ 112 (355)
++++|.|+|+|.+|..++..|.+.|++|+++|+++++++.+.+.+... .++.+.+ ++++|+||+++++.
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~~~ 81 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGSDD 81 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecCCH
Confidence 457899999999999999999999999999999999999888766432 1222222 35789999999865
No 152
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=98.63 E-value=1.8e-07 Score=86.09 Aligned_cols=107 Identities=15% Similarity=0.216 Sum_probs=76.9
Q ss_pred CCCceEEEEcccHHhHH-HHHHHHHC-CCcEE-EEeCChhHHHHHHh-CCCCCCCCHHHHhhcCCEEEEeCCCchHHHHH
Q 018506 43 CQFESVGFIGLGNMGFR-MASNLMKA-GYKMA-VHDVNCNVMKMFSD-MGVPTKETPFEVAEASDVVITMLPSSSHVLDV 118 (355)
Q Consensus 43 ~~~mkIgiIG~G~mG~~-ia~~L~~~-G~~V~-v~dr~~~~~~~l~~-~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~v 118 (355)
|+++||||||+|.||.. ++..|.+. +++++ ++|+++++.+.+.+ .|+...++.+++..+.|+|++|+|+....+.+
T Consensus 3 m~~~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~~~~~~~l~~~~D~V~i~tp~~~h~~~~ 82 (319)
T 1tlt_A 3 LKKLRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPYADSLSSLAASCDAVFVHSSTASHFDVV 82 (319)
T ss_dssp --CEEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCBCSSHHHHHTTCSEEEECSCTTHHHHHH
T ss_pred CCcceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCccCcHHHhhcCCCEEEEeCCchhHHHHH
Confidence 45689999999999996 88888764 67765 89999999888765 36667778877767899999999987655554
Q ss_pred hcCCCccccCCCCCCCeEEEEc-CCCCHHHHHHHHHHHhh
Q 018506 119 YNGPNGLLQGGNSVRPQLLIDS-STIDPQTSRNISAAVSN 157 (355)
Q Consensus 119 l~~~~~~l~~~~~~~~~ivi~~-st~~~~~~~~l~~~~~~ 157 (355)
.. .++. +..++++. .+..+.+.+++.+...+
T Consensus 83 ~~----al~~----G~~v~~eKP~~~~~~~~~~l~~~a~~ 114 (319)
T 1tlt_A 83 ST----LLNA----GVHVCVDKPLAENLRDAERLVELAAR 114 (319)
T ss_dssp HH----HHHT----TCEEEEESSSCSSHHHHHHHHHHHHH
T ss_pred HH----HHHc----CCeEEEeCCCCCCHHHHHHHHHHHHH
Confidence 43 2332 22366663 45667777777776543
No 153
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=98.60 E-value=1.8e-07 Score=87.13 Aligned_cols=105 Identities=19% Similarity=0.321 Sum_probs=78.5
Q ss_pred CceEEEEcccHHhHHHHHHHHHC-CCcEE-EEeCChhHHHHHHh-CCCC-CCCCHHHHhh--cCCEEEEeCCCchHHHHH
Q 018506 45 FESVGFIGLGNMGFRMASNLMKA-GYKMA-VHDVNCNVMKMFSD-MGVP-TKETPFEVAE--ASDVVITMLPSSSHVLDV 118 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~~-G~~V~-v~dr~~~~~~~l~~-~g~~-~~~s~~e~~~--~aDiVi~~v~~~~~~~~v 118 (355)
++||||||+|.||..++..|.+. +.+++ ++|+++++++.+.+ .++. ..++.+++++ +.|+|++|+|+....+.+
T Consensus 2 ~~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~ 81 (344)
T 3ezy_A 2 SLRIGVIGLGRIGTIHAENLKMIDDAILYAISDVREDRLREMKEKLGVEKAYKDPHELIEDPNVDAVLVCSSTNTHSELV 81 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHHHTCSEEESSHHHHHHCTTCCEEEECSCGGGHHHHH
T ss_pred eeEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHhCCCceeCCHHHHhcCCCCCEEEEcCCCcchHHHH
Confidence 47999999999999999999875 56654 78999999888766 4553 6789999987 799999999987665554
Q ss_pred hcCCCccccCCCCCCCeEEEEcC-CCCHHHHHHHHHHHhh
Q 018506 119 YNGPNGLLQGGNSVRPQLLIDSS-TIDPQTSRNISAAVSN 157 (355)
Q Consensus 119 l~~~~~~l~~~~~~~~~ivi~~s-t~~~~~~~~l~~~~~~ 157 (355)
.. .++. +..++++.- +..+.+.+++.+...+
T Consensus 82 ~~----al~~----gk~v~~EKP~~~~~~e~~~l~~~a~~ 113 (344)
T 3ezy_A 82 IA----CAKA----KKHVFCEKPLSLNLADVDRMIEETKK 113 (344)
T ss_dssp HH----HHHT----TCEEEEESCSCSCHHHHHHHHHHHHH
T ss_pred HH----HHhc----CCeEEEECCCCCCHHHHHHHHHHHHH
Confidence 43 2332 224666643 5677777887776543
No 154
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=98.60 E-value=3.7e-07 Score=85.58 Aligned_cols=106 Identities=17% Similarity=0.182 Sum_probs=79.8
Q ss_pred CCCceEEEEcccHHhHHHHHHHHHC-CCcE-EEEeCChhHHHHHHhCCCCCCCCHHHHhh--cCCEEEEeCCCchHHHHH
Q 018506 43 CQFESVGFIGLGNMGFRMASNLMKA-GYKM-AVHDVNCNVMKMFSDMGVPTKETPFEVAE--ASDVVITMLPSSSHVLDV 118 (355)
Q Consensus 43 ~~~mkIgiIG~G~mG~~ia~~L~~~-G~~V-~v~dr~~~~~~~l~~~g~~~~~s~~e~~~--~aDiVi~~v~~~~~~~~v 118 (355)
|+++||||||+|.||...+..|.+. +.+| .++|+++++.+...+.|+...++.+++++ +.|+|++|+|+....+.+
T Consensus 3 m~~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~a~~~g~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~ 82 (359)
T 3e18_A 3 LKKYQLVIVGYGGMGSYHVTLASAADNLEVHGVFDILAEKREAAAQKGLKIYESYEAVLADEKVDAVLIATPNDSHKELA 82 (359)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHHHTTTCCBCSCHHHHHHCTTCCEEEECSCGGGHHHHH
T ss_pred CCcCcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHhcCCceeCCHHHHhcCCCCCEEEEcCCcHHHHHHH
Confidence 4568999999999999999999886 5675 47899999987666678888899999987 789999999988666554
Q ss_pred hcCCCccccCCCCCCCeEEEEc-CCCCHHHHHHHHHHHh
Q 018506 119 YNGPNGLLQGGNSVRPQLLIDS-STIDPQTSRNISAAVS 156 (355)
Q Consensus 119 l~~~~~~l~~~~~~~~~ivi~~-st~~~~~~~~l~~~~~ 156 (355)
.. .++. +..++++- .+..+.+.+++.+...
T Consensus 83 ~~----al~a----GkhVl~EKP~a~~~~ea~~l~~~a~ 113 (359)
T 3e18_A 83 IS----ALEA----GKHVVCEKPVTMTSEDLLAIMDVAK 113 (359)
T ss_dssp HH----HHHT----TCEEEEESSCCSSHHHHHHHHHHHH
T ss_pred HH----HHHC----CCCEEeeCCCcCCHHHHHHHHHHHH
Confidence 43 3332 22355553 3455777777776654
No 155
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=98.60 E-value=1.4e-07 Score=75.38 Aligned_cols=69 Identities=17% Similarity=0.266 Sum_probs=54.4
Q ss_pred CceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHh-CCCCC----CCCHHHH----hhcCCEEEEeCCCch
Q 018506 45 FESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSD-MGVPT----KETPFEV----AEASDVVITMLPSSS 113 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~-~g~~~----~~s~~e~----~~~aDiVi~~v~~~~ 113 (355)
.|+|.|+|+|.+|..++..|.+.|++|+++|+++++.+.+.+ .+... ..+...+ ++++|+||+++|++.
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~ 81 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKEE 81 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCch
Confidence 489999999999999999999999999999999999888765 35421 1223221 467999999998763
No 156
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=98.58 E-value=2.4e-07 Score=86.79 Aligned_cols=106 Identities=14% Similarity=0.210 Sum_probs=78.1
Q ss_pred CCCceEEEEcccHHhHHHHHHHH-H-CCCcEE-EEeCChhHHHHHHh-CC--CCCCCCHHHHhh--cCCEEEEeCCCchH
Q 018506 43 CQFESVGFIGLGNMGFRMASNLM-K-AGYKMA-VHDVNCNVMKMFSD-MG--VPTKETPFEVAE--ASDVVITMLPSSSH 114 (355)
Q Consensus 43 ~~~mkIgiIG~G~mG~~ia~~L~-~-~G~~V~-v~dr~~~~~~~l~~-~g--~~~~~s~~e~~~--~aDiVi~~v~~~~~ 114 (355)
|+++||||||+|.||..++..|. + .+.+++ ++|+++++++.+.+ .+ ....++.+++++ +.|+|++|+|+...
T Consensus 21 m~~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h 100 (357)
T 3ec7_A 21 GMTLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIVAGRAQAALDKYAIEAKDYNDYHDLINDKDVEVVIITASNEAH 100 (357)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSSTTHHHHHHHHHTCCCEEESSHHHHHHCTTCCEEEECSCGGGH
T ss_pred CCeeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEEcCCcHHH
Confidence 45679999999999999999998 4 366754 88999999988766 35 567789999987 48999999998876
Q ss_pred HHHHhcCCCccccCCCCCCCeEEEEcC-CCCHHHHHHHHHHHh
Q 018506 115 VLDVYNGPNGLLQGGNSVRPQLLIDSS-TIDPQTSRNISAAVS 156 (355)
Q Consensus 115 ~~~vl~~~~~~l~~~~~~~~~ivi~~s-t~~~~~~~~l~~~~~ 156 (355)
.+.+.. .++. +..++++.- +..+.+.+++.+...
T Consensus 101 ~~~~~~----al~a----Gk~Vl~EKPla~~~~e~~~l~~~a~ 135 (357)
T 3ec7_A 101 ADVAVA----ALNA----NKYVFCEKPLAVTAADCQRVIEAEQ 135 (357)
T ss_dssp HHHHHH----HHHT----TCEEEEESSSCSSHHHHHHHHHHHH
T ss_pred HHHHHH----HHHC----CCCEEeecCccCCHHHHHHHHHHHH
Confidence 665543 3332 223555543 556777777777654
No 157
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=98.58 E-value=7e-08 Score=89.37 Aligned_cols=108 Identities=19% Similarity=0.175 Sum_probs=84.1
Q ss_pred CCCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHHHHhcCC
Q 018506 43 CQFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNGP 122 (355)
Q Consensus 43 ~~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl~~~ 122 (355)
...++|||||+|.+|..+|+.+..-|.+|.+||+.+.. ...+.++. ..+++++++.||+|++++|-....+.++...
T Consensus 139 l~g~tvGIiG~G~IG~~va~~~~~fg~~v~~~d~~~~~--~~~~~~~~-~~~l~ell~~sDivslh~Plt~~T~~li~~~ 215 (334)
T 3kb6_A 139 LNRLTLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVKRE--DLKEKGCV-YTSLDELLKESDVISLHVPYTKETHHMINEE 215 (334)
T ss_dssp GGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH--HHHHTTCE-ECCHHHHHHHCSEEEECCCCCTTTTTCBCHH
T ss_pred ecCcEEEEECcchHHHHHHHhhcccCceeeecCCccch--hhhhcCce-ecCHHHHHhhCCEEEEcCCCChhhccCcCHH
Confidence 34578999999999999999999999999999987543 23334443 4589999999999999999887766655432
Q ss_pred CccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhh
Q 018506 123 NGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSN 157 (355)
Q Consensus 123 ~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~ 157 (355)
.++.+ .++.++||++-+..-..+.+.+.+.+
T Consensus 216 --~l~~m--k~~a~lIN~aRG~iVde~aL~~aL~~ 246 (334)
T 3kb6_A 216 --RISLM--KDGVYLINTARGKVVDTDALYRAYQR 246 (334)
T ss_dssp --HHHHS--CTTEEEEECSCGGGBCHHHHHHHHHT
T ss_pred --HHhhc--CCCeEEEecCccccccHHHHHHHHHh
Confidence 34433 36789999999987777778887764
No 158
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=98.58 E-value=3.3e-07 Score=84.57 Aligned_cols=104 Identities=14% Similarity=0.214 Sum_probs=76.7
Q ss_pred CceEEEEcccHHhHHHHHHHHHC-CCcE-EEEeCChhHHHHHHhC-CC-CCCCCHHHHh-hcCCEEEEeCCCchHHHHHh
Q 018506 45 FESVGFIGLGNMGFRMASNLMKA-GYKM-AVHDVNCNVMKMFSDM-GV-PTKETPFEVA-EASDVVITMLPSSSHVLDVY 119 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~~-G~~V-~v~dr~~~~~~~l~~~-g~-~~~~s~~e~~-~~aDiVi~~v~~~~~~~~vl 119 (355)
|+||||||+|.||..++..|.+. ++++ .++|+++++.+.+.+. +. ...++.++++ .+.|+|++|+|+....+.+.
T Consensus 1 ~~~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~D~V~i~tp~~~h~~~~~ 80 (325)
T 2ho3_A 1 MLKLGVIGTGAISHHFIEAAHTSGEYQLVAIYSRKLETAATFASRYQNIQLFDQLEVFFKSSFDLVYIASPNSLHFAQAK 80 (325)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTSEEEEEEECSSHHHHHHHGGGSSSCEEESCHHHHHTSSCSEEEECSCGGGHHHHHH
T ss_pred CeEEEEEeCCHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHcCCCeEeCCHHHHhCCCCCEEEEeCChHHHHHHHH
Confidence 47999999999999999999986 4565 5899999999887763 43 5577899998 78999999999875544443
Q ss_pred cCCCccccCCCCCCCeEEEEc-CCCCHHHHHHHHHHHh
Q 018506 120 NGPNGLLQGGNSVRPQLLIDS-STIDPQTSRNISAAVS 156 (355)
Q Consensus 120 ~~~~~~l~~~~~~~~~ivi~~-st~~~~~~~~l~~~~~ 156 (355)
. .++. +..++++. .+....+.+++.+...
T Consensus 81 ~----al~~----gk~V~~EKP~~~~~~~~~~l~~~a~ 110 (325)
T 2ho3_A 81 A----ALSA----GKHVILEKPAVSQPQEWFDLIQTAE 110 (325)
T ss_dssp H----HHHT----TCEEEEESSCCSSHHHHHHHHHHHH
T ss_pred H----HHHc----CCcEEEecCCcCCHHHHHHHHHHHH
Confidence 2 2332 22366664 4556777777777654
No 159
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=98.57 E-value=2.9e-07 Score=85.64 Aligned_cols=106 Identities=19% Similarity=0.294 Sum_probs=76.5
Q ss_pred CCCceEEEEcccHHhHHHHHHHH-H-CCCc-EEEEeCChhHHHHHHh-CCC-CCCCCHHHHhh--cCCEEEEeCCCchHH
Q 018506 43 CQFESVGFIGLGNMGFRMASNLM-K-AGYK-MAVHDVNCNVMKMFSD-MGV-PTKETPFEVAE--ASDVVITMLPSSSHV 115 (355)
Q Consensus 43 ~~~mkIgiIG~G~mG~~ia~~L~-~-~G~~-V~v~dr~~~~~~~l~~-~g~-~~~~s~~e~~~--~aDiVi~~v~~~~~~ 115 (355)
++++||||||+|.||..++..|. + .+++ |.++|+++++++.+.+ .|+ ...++.+++++ +.|+|++|+|+....
T Consensus 6 ~~~~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~ 85 (346)
T 3cea_A 6 RKPLRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYTNYKDMIDTENIDAIFIVAPTPFHP 85 (346)
T ss_dssp CCCEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEESCHHHHHTTSCCSEEEECSCGGGHH
T ss_pred CCcceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEEeCChHhHH
Confidence 46789999999999999999998 5 3667 4688999999988766 366 45778999886 699999999987665
Q ss_pred HHHhcCCCccccCCCCCCCeEEEEc-CCCCHHHHHHHHHHHh
Q 018506 116 LDVYNGPNGLLQGGNSVRPQLLIDS-STIDPQTSRNISAAVS 156 (355)
Q Consensus 116 ~~vl~~~~~~l~~~~~~~~~ivi~~-st~~~~~~~~l~~~~~ 156 (355)
+.+.. .++. +..++++. .+..+.+.+++.+...
T Consensus 86 ~~~~~----al~~----G~~v~~eKp~~~~~~~~~~l~~~a~ 119 (346)
T 3cea_A 86 EMTIY----AMNA----GLNVFCEKPLGLDFNEVDEMAKVIK 119 (346)
T ss_dssp HHHHH----HHHT----TCEEEECSCCCSCHHHHHHHHHHHH
T ss_pred HHHHH----HHHC----CCEEEEcCCCCCCHHHHHHHHHHHH
Confidence 55443 2332 11355542 3455666667766554
No 160
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=98.57 E-value=2.3e-07 Score=85.62 Aligned_cols=91 Identities=20% Similarity=0.237 Sum_probs=70.1
Q ss_pred CCceEEEEcccHHhHHHHHHHHH--CCCcEEEEeCChhHHHHHHhC------CCCCCCCHHHHhhcCCEEEEeCCCchHH
Q 018506 44 QFESVGFIGLGNMGFRMASNLMK--AGYKMAVHDVNCNVMKMFSDM------GVPTKETPFEVAEASDVVITMLPSSSHV 115 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~--~G~~V~v~dr~~~~~~~l~~~------g~~~~~s~~e~~~~aDiVi~~v~~~~~~ 115 (355)
..++|+|||+|.||..++..|.+ ...+|.+|||++++++++.+. .+. ++++++++ ++|+|++|+|...
T Consensus 124 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~~~a~~la~~~~~~~~~~~-~~~~~e~v-~aDvVi~aTp~~~-- 199 (322)
T 1omo_A 124 NSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISAS-VQPAEEAS-RCDVLVTTTPSRK-- 199 (322)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEE-ECCHHHHT-SSSEEEECCCCSS--
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhcCceEE-ECCHHHHh-CCCEEEEeeCCCC--
Confidence 45789999999999999999987 346799999999999888652 234 67899999 9999999999752
Q ss_pred HHHhcCCCccccCCCCCCCeEEEEcCCCCHH
Q 018506 116 LDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQ 146 (355)
Q Consensus 116 ~~vl~~~~~~l~~~~~~~~~ivi~~st~~~~ 146 (355)
.++. ..+++ +++.|++.++..|.
T Consensus 200 -pv~~--~~~l~-----~G~~V~~ig~~~p~ 222 (322)
T 1omo_A 200 -PVVK--AEWVE-----EGTHINAIGADGPG 222 (322)
T ss_dssp -CCBC--GGGCC-----TTCEEEECSCCSTT
T ss_pred -ceec--HHHcC-----CCeEEEECCCCCCC
Confidence 2221 12332 56788888887776
No 161
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=98.56 E-value=7e-08 Score=88.91 Aligned_cols=69 Identities=16% Similarity=0.299 Sum_probs=51.7
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCC--cEEEEeCChhHHH--HHH-hCCC------CC-CCCHHHHhhcCCEEEEeCCC
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGY--KMAVHDVNCNVMK--MFS-DMGV------PT-KETPFEVAEASDVVITMLPS 111 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~--~V~v~dr~~~~~~--~l~-~~g~------~~-~~s~~e~~~~aDiVi~~v~~ 111 (355)
.+|||+|||+|.||+.++..|+.+|+ +|+++||++++++ .+. ..+. .. .++..+.++++|+||++++.
T Consensus 6 ~~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~aD~Vii~v~~ 85 (319)
T 1lld_A 6 KPTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPEICRDADMVVITAGP 85 (319)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCGGGGTTCSEEEECCCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeCCCHHHhCCCCEEEECCCC
Confidence 45899999999999999999999999 9999999987765 221 1111 11 11124567899999999965
Q ss_pred c
Q 018506 112 S 112 (355)
Q Consensus 112 ~ 112 (355)
+
T Consensus 86 ~ 86 (319)
T 1lld_A 86 R 86 (319)
T ss_dssp C
T ss_pred C
Confidence 4
No 162
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=98.56 E-value=2.2e-07 Score=87.99 Aligned_cols=94 Identities=15% Similarity=0.149 Sum_probs=73.0
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHHHHhcCCC
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNGPN 123 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl~~~~ 123 (355)
.-++|+|||+|.+|..+|+.|...|.+|++||+++.+.......|... .+++++++.+|+|+++..+. .++..
T Consensus 210 ~GktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~~G~~~-~sL~eal~~ADVVilt~gt~----~iI~~-- 282 (436)
T 3h9u_A 210 AGKTACVCGYGDVGKGCAAALRGFGARVVVTEVDPINALQAAMEGYQV-LLVEDVVEEAHIFVTTTGND----DIITS-- 282 (436)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE-CCHHHHTTTCSEEEECSSCS----CSBCT--
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCChhhhHHHHHhCCee-cCHHHHHhhCCEEEECCCCc----CccCH--
Confidence 457899999999999999999999999999999998776666666654 48999999999999876543 22221
Q ss_pred ccccCCCCCCCeEEEEcCCCCHH
Q 018506 124 GLLQGGNSVRPQLLIDSSTIDPQ 146 (355)
Q Consensus 124 ~~l~~~~~~~~~ivi~~st~~~~ 146 (355)
..++.+ .++.+|+|++...++
T Consensus 283 e~l~~M--K~gAIVINvgRg~vE 303 (436)
T 3h9u_A 283 EHFPRM--RDDAIVCNIGHFDTE 303 (436)
T ss_dssp TTGGGC--CTTEEEEECSSSGGG
T ss_pred HHHhhc--CCCcEEEEeCCCCCc
Confidence 234332 367899999987653
No 163
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=98.56 E-value=3.4e-07 Score=85.28 Aligned_cols=104 Identities=15% Similarity=0.210 Sum_probs=77.3
Q ss_pred CceEEEEcccHHhHHHHHHHH-H-CCCcEE-EEeCChhHHHHHHh-CC--CCCCCCHHHHhhc--CCEEEEeCCCchHHH
Q 018506 45 FESVGFIGLGNMGFRMASNLM-K-AGYKMA-VHDVNCNVMKMFSD-MG--VPTKETPFEVAEA--SDVVITMLPSSSHVL 116 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~-~-~G~~V~-v~dr~~~~~~~l~~-~g--~~~~~s~~e~~~~--aDiVi~~v~~~~~~~ 116 (355)
++||||||+|.||..++..|. + .+++++ ++|+++++++.+.+ .+ ....++.++++++ .|+|++|+|+....+
T Consensus 2 ~~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~~~~~~~~~~~~~g~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~ 81 (344)
T 3mz0_A 2 SLRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVNQEAAQKVVEQYQLNATVYPNDDSLLADENVDAVLVTSWGPAHES 81 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECSSHHHHHHHHHHTTCCCEEESSHHHHHHCTTCCEEEECSCGGGHHH
T ss_pred eEEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEECCCchhHHH
Confidence 479999999999999999998 4 366754 88999999988876 45 5677899999876 899999999886665
Q ss_pred HHhcCCCccccCCCCCCCeEEEEcC-CCCHHHHHHHHHHHh
Q 018506 117 DVYNGPNGLLQGGNSVRPQLLIDSS-TIDPQTSRNISAAVS 156 (355)
Q Consensus 117 ~vl~~~~~~l~~~~~~~~~ivi~~s-t~~~~~~~~l~~~~~ 156 (355)
.+.. .++. +..++++.- +..+.+.+++.+...
T Consensus 82 ~~~~----al~~----Gk~vl~EKP~a~~~~e~~~l~~~a~ 114 (344)
T 3mz0_A 82 SVLK----AIKA----QKYVFCEKPLATTAEGCMRIVEEEI 114 (344)
T ss_dssp HHHH----HHHT----TCEEEECSCSCSSHHHHHHHHHHHH
T ss_pred HHHH----HHHC----CCcEEEcCCCCCCHHHHHHHHHHHH
Confidence 5543 3332 123555443 556777777777654
No 164
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=98.56 E-value=1.1e-07 Score=86.96 Aligned_cols=67 Identities=18% Similarity=0.185 Sum_probs=50.0
Q ss_pred ceEEEEcccHHhHHHHHHHHHCCC--cEEEEeCChhHHHHHHh---CC------CCCCCCHHHHhhcCCEEEEeCCCc
Q 018506 46 ESVGFIGLGNMGFRMASNLMKAGY--KMAVHDVNCNVMKMFSD---MG------VPTKETPFEVAEASDVVITMLPSS 112 (355)
Q Consensus 46 mkIgiIG~G~mG~~ia~~L~~~G~--~V~v~dr~~~~~~~l~~---~g------~~~~~s~~e~~~~aDiVi~~v~~~ 112 (355)
|||+|||+|.||.+++..|+.+|+ +|++||+++++++.... .. .....+..++++++|+||++++.+
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~a~~~aDvVIi~~~~~ 78 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWHGGHSELADAQVVILTAGAN 78 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEEECGGGGTTCSEEEECC---
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEECCHHHhCCCCEEEEcCCCC
Confidence 699999999999999999999999 99999999887654221 11 111112346788999999999654
No 165
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=98.56 E-value=1e-07 Score=91.89 Aligned_cols=110 Identities=14% Similarity=0.066 Sum_probs=80.6
Q ss_pred ccCCCCCCCCCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchH
Q 018506 35 FFSSQVPSCQFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSH 114 (355)
Q Consensus 35 ~~~~~~~~~~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~ 114 (355)
|.+.+.....-++|+|||+|.||..+|+.|...|.+|++||+++.+.......|+.. .+++++++.+|+|++++.+...
T Consensus 247 w~r~~~~~l~GktVgIIG~G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~~~g~~~-~~l~ell~~aDiVi~~~~t~~l 325 (479)
T 1v8b_A 247 LMRATDFLISGKIVVICGYGDVGKGCASSMKGLGARVYITEIDPICAIQAVMEGFNV-VTLDEIVDKGDFFITCTGNVDV 325 (479)
T ss_dssp HHHHHCCCCTTSEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTCEE-CCHHHHTTTCSEEEECCSSSSS
T ss_pred hhhccccccCCCEEEEEeeCHHHHHHHHHHHhCcCEEEEEeCChhhHHHHHHcCCEe-cCHHHHHhcCCEEEECCChhhh
Confidence 544333334567899999999999999999999999999999998765555566643 5899999999999999744322
Q ss_pred HHHHhcCCCccccCCCCCCCeEEEEcCCCCHH-HHHHHHH
Q 018506 115 VLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQ-TSRNISA 153 (355)
Q Consensus 115 ~~~vl~~~~~~l~~~~~~~~~ivi~~st~~~~-~~~~l~~ 153 (355)
+.. ..++.+ .++.+++|++....+ ....+.+
T Consensus 326 ----I~~--~~l~~M--K~gailiNvgrg~~EId~~aL~~ 357 (479)
T 1v8b_A 326 ----IKL--EHLLKM--KNNAVVGNIGHFDDEIQVNELFN 357 (479)
T ss_dssp ----BCH--HHHTTC--CTTCEEEECSSTTTSBCHHHHHT
T ss_pred ----cCH--HHHhhc--CCCcEEEEeCCCCccccchhhhc
Confidence 211 123322 257899999999873 5566665
No 166
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=98.55 E-value=5.9e-07 Score=83.07 Aligned_cols=103 Identities=12% Similarity=0.187 Sum_probs=75.3
Q ss_pred ceEEEEcccHHhHHH-HHHHHHCCCcEE-EEeCChhHHHHHHh-CCCC-CCCCHHHHhh--cCCEEEEeCCCchHHHHHh
Q 018506 46 ESVGFIGLGNMGFRM-ASNLMKAGYKMA-VHDVNCNVMKMFSD-MGVP-TKETPFEVAE--ASDVVITMLPSSSHVLDVY 119 (355)
Q Consensus 46 mkIgiIG~G~mG~~i-a~~L~~~G~~V~-v~dr~~~~~~~l~~-~g~~-~~~s~~e~~~--~aDiVi~~v~~~~~~~~vl 119 (355)
|||||||+|.||..+ +..|.+.+++++ ++|+++++.+.+.+ .++. ..++.+++++ +.|+|++++|.....+.+.
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~~~~~~vav~d~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~ 80 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRATGGEVVSMMSTSAERGAAYATENGIGKSVTSVEELVGDPDVDAVYVSTTNELHREQTL 80 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHHTTCEEEEEECSCHHHHHHHHHHTTCSCCBSCHHHHHTCTTCCEEEECSCGGGHHHHHH
T ss_pred CeEEEEcccHHHHHhhhHHhhcCCCeEEEEECCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCChhHhHHHHH
Confidence 589999999999998 888888778864 88999999888765 4654 6788999886 4999999999875544443
Q ss_pred cCCCccccCCCCCCCeEEEEc-CCCCHHHHHHHHHHHh
Q 018506 120 NGPNGLLQGGNSVRPQLLIDS-STIDPQTSRNISAAVS 156 (355)
Q Consensus 120 ~~~~~~l~~~~~~~~~ivi~~-st~~~~~~~~l~~~~~ 156 (355)
. .++. +..++++. .+..+.+.+++.+...
T Consensus 81 ~----al~~----Gk~v~~ekP~~~~~~~~~~l~~~a~ 110 (332)
T 2glx_A 81 A----AIRA----GKHVLCEKPLAMTLEDAREMVVAAR 110 (332)
T ss_dssp H----HHHT----TCEEEECSSSCSSHHHHHHHHHHHH
T ss_pred H----HHHC----CCeEEEeCCCcCCHHHHHHHHHHHH
Confidence 2 2332 11355553 4556777777777654
No 167
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=98.55 E-value=3e-08 Score=80.67 Aligned_cols=95 Identities=16% Similarity=0.240 Sum_probs=69.7
Q ss_pred ceEEEEcc----cHHhHHHHHHHHHCCCcEEEEeCCh--hHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHHHHh
Q 018506 46 ESVGFIGL----GNMGFRMASNLMKAGYKMAVHDVNC--NVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVY 119 (355)
Q Consensus 46 mkIgiIG~----G~mG~~ia~~L~~~G~~V~v~dr~~--~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl 119 (355)
.+|+|||+ |.||..++++|.+.||+|+.+|++. +.+ .|.....|+.|+.+..|++++++|+ ..+.+++
T Consensus 14 ~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~vnp~~~g~~i-----~G~~~~~sl~el~~~~Dlvii~vp~-~~v~~v~ 87 (145)
T 2duw_A 14 RTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGKTL-----LGQQGYATLADVPEKVDMVDVFRNS-EAAWGVA 87 (145)
T ss_dssp CCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEECSSSTTSEE-----TTEECCSSTTTCSSCCSEEECCSCS-THHHHHH
T ss_pred CEEEEECcCCCCCChHHHHHHHHHHCCCEEEEeCCccccccc-----CCeeccCCHHHcCCCCCEEEEEeCH-HHHHHHH
Confidence 57999999 8999999999999999977776654 222 4777788899988899999999996 5888877
Q ss_pred cCCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHh
Q 018506 120 NGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVS 156 (355)
Q Consensus 120 ~~~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~ 156 (355)
.+. .+. ..+.++++.++. .+++.+...
T Consensus 88 ~~~---~~~---g~~~i~i~~~~~----~~~l~~~a~ 114 (145)
T 2duw_A 88 QEA---IAI---GAKTLWLQLGVI----NEQAAVLAR 114 (145)
T ss_dssp HHH---HHH---TCCEEECCTTCC----CHHHHHHHH
T ss_pred HHH---HHc---CCCEEEEcCChH----HHHHHHHHH
Confidence 653 221 123477776554 244555554
No 168
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=98.55 E-value=1.1e-07 Score=78.07 Aligned_cols=76 Identities=18% Similarity=0.171 Sum_probs=58.3
Q ss_pred CCCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHH-hCCCCCC----CCHH---HH-hhcCCEEEEeCCCch
Q 018506 43 CQFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFS-DMGVPTK----ETPF---EV-AEASDVVITMLPSSS 113 (355)
Q Consensus 43 ~~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~-~~g~~~~----~s~~---e~-~~~aDiVi~~v~~~~ 113 (355)
...++|.|+|+|.+|..++..|.+.|++|++++|++++++.+. ..|.... .+.+ ++ +..+|+||++++++.
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~~~~ 96 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFTNDDS 96 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECSSCHH
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEeCCcH
Confidence 3458899999999999999999999999999999999988776 4554221 1222 22 567999999999865
Q ss_pred HHHHH
Q 018506 114 HVLDV 118 (355)
Q Consensus 114 ~~~~v 118 (355)
....+
T Consensus 97 ~~~~~ 101 (155)
T 2g1u_A 97 TNFFI 101 (155)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44443
No 169
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=98.53 E-value=4.1e-07 Score=83.92 Aligned_cols=104 Identities=15% Similarity=0.143 Sum_probs=73.0
Q ss_pred CceEEEEcccHHhH-HHHHHHHHC-CCcEEEEeCChhHHHHHHh-CCCCC-CCCHHHHh-hcCCEEEEeCCCchHHHHHh
Q 018506 45 FESVGFIGLGNMGF-RMASNLMKA-GYKMAVHDVNCNVMKMFSD-MGVPT-KETPFEVA-EASDVVITMLPSSSHVLDVY 119 (355)
Q Consensus 45 ~mkIgiIG~G~mG~-~ia~~L~~~-G~~V~v~dr~~~~~~~l~~-~g~~~-~~s~~e~~-~~aDiVi~~v~~~~~~~~vl 119 (355)
++||||||+|.||. .++..|.+. +++++++|+++++.+.+.+ .|+.. ..+..+++ .+.|+|++|+|+....+.+.
T Consensus 2 ~~~igiIG~G~ig~~~~~~~l~~~~~~~l~v~d~~~~~~~~~a~~~g~~~~~~~~~~~l~~~~D~V~i~tp~~~h~~~~~ 81 (323)
T 1xea_A 2 SLKIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATCTDYRDVLQYGVDAVMIHAATDVHSTLAA 81 (323)
T ss_dssp CEEEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCCSSTTGGGGGCCSEEEECSCGGGHHHHHH
T ss_pred CcEEEEECCCHHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHcCCCccccCHHHHhhcCCCEEEEECCchhHHHHHH
Confidence 47999999999998 599999875 6787799999999988765 46553 44444555 68999999999775544443
Q ss_pred cCCCccccCCCCCCCeEEEEc-CCCCHHHHHHHHHHHh
Q 018506 120 NGPNGLLQGGNSVRPQLLIDS-STIDPQTSRNISAAVS 156 (355)
Q Consensus 120 ~~~~~~l~~~~~~~~~ivi~~-st~~~~~~~~l~~~~~ 156 (355)
. .++. +..++++. .+.++.+.+++.+...
T Consensus 82 ~----al~~----Gk~V~~EKP~~~~~~~~~~l~~~a~ 111 (323)
T 1xea_A 82 F----FLHL----GIPTFVDKPLAASAQECENLYELAE 111 (323)
T ss_dssp H----HHHT----TCCEEEESCSCSSHHHHHHHHHHHH
T ss_pred H----HHHC----CCeEEEeCCCcCCHHHHHHHHHHHH
Confidence 2 2321 11366653 4556777777776654
No 170
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=98.52 E-value=4.2e-07 Score=84.30 Aligned_cols=106 Identities=13% Similarity=0.206 Sum_probs=78.6
Q ss_pred CCCceEEEEcccHHhH-HHHHHHHHCCCcE-EEEeCChhHHHHHHhC--CCCCCCCHHHHhh--cCCEEEEeCCCchHHH
Q 018506 43 CQFESVGFIGLGNMGF-RMASNLMKAGYKM-AVHDVNCNVMKMFSDM--GVPTKETPFEVAE--ASDVVITMLPSSSHVL 116 (355)
Q Consensus 43 ~~~mkIgiIG~G~mG~-~ia~~L~~~G~~V-~v~dr~~~~~~~l~~~--g~~~~~s~~e~~~--~aDiVi~~v~~~~~~~ 116 (355)
|+++||||||+|.+|. .++..|...+++| .++|+++++++.+.+. +....++.+++++ +.|+|++|+|+....+
T Consensus 2 M~~~rvgiiG~G~~~~~~~~~~l~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~ 81 (336)
T 2p2s_A 2 MKKIRFAAIGLAHNHIYDMCQQLIDAGAELAGVFESDSDNRAKFTSLFPSVPFAASAEQLITDASIDLIACAVIPCDRAE 81 (336)
T ss_dssp --CCEEEEECCSSTHHHHHHHHHHHTTCEEEEEECSCTTSCHHHHHHSTTCCBCSCHHHHHTCTTCCEEEECSCGGGHHH
T ss_pred CCccEEEEECCChHHHHHhhhhhcCCCcEEEEEeCCCHHHHHHHHHhcCCCcccCCHHHHhhCCCCCEEEEeCChhhHHH
Confidence 4678999999999996 6888887778885 6899999998887763 5677889999986 6899999999887666
Q ss_pred HHhcCCCccccCCCCCCCeEEEEc-CCCCHHHHHHHHHHHh
Q 018506 117 DVYNGPNGLLQGGNSVRPQLLIDS-STIDPQTSRNISAAVS 156 (355)
Q Consensus 117 ~vl~~~~~~l~~~~~~~~~ivi~~-st~~~~~~~~l~~~~~ 156 (355)
.+.. .++. +..++++. .+..+.+.+++.+...
T Consensus 82 ~~~~----al~a----GkhVl~EKP~a~~~~e~~~l~~~a~ 114 (336)
T 2p2s_A 82 LALR----TLDA----GKDFFTAKPPLTTLEQLDAVQRRVA 114 (336)
T ss_dssp HHHH----HHHT----TCEEEECSSCCSCHHHHHHHHHHHH
T ss_pred HHHH----HHHC----CCcEEEeCCCCCCHHHHHHHHHHHH
Confidence 5553 2332 12366663 5566777777777654
No 171
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=98.52 E-value=2e-07 Score=85.93 Aligned_cols=65 Identities=20% Similarity=0.222 Sum_probs=52.1
Q ss_pred CceEEEEcccHHhHHHHHHHHHCCC-cEEEEeCChhHHHHHH----h------CC--CCCCCCHHHHhhcCCEEEEeCC
Q 018506 45 FESVGFIGLGNMGFRMASNLMKAGY-KMAVHDVNCNVMKMFS----D------MG--VPTKETPFEVAEASDVVITMLP 110 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~~G~-~V~v~dr~~~~~~~l~----~------~g--~~~~~s~~e~~~~aDiVi~~v~ 110 (355)
+|||+|||+|.||.+++..|+..|+ +|.+||+++++++... + .. +..+++. +++++||+||+++.
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~Vi~a~g 81 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTY-DDLAGADVVIVTAG 81 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCG-GGGTTCSEEEECCS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeCC
Confidence 4799999999999999999999998 9999999988765321 1 11 2233566 78899999999983
No 172
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=98.50 E-value=1.1e-07 Score=89.14 Aligned_cols=103 Identities=17% Similarity=0.259 Sum_probs=73.1
Q ss_pred CCCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCC----CC--CCCHHHHhhcCCEEEEeCCCchHHH
Q 018506 43 CQFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGV----PT--KETPFEVAEASDVVITMLPSSSHVL 116 (355)
Q Consensus 43 ~~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~----~~--~~s~~e~~~~aDiVi~~v~~~~~~~ 116 (355)
...+||+|||+|.||..++..|++. ++|+++||++++++.+.+... .. ..++.++++++|+||.|+|.....
T Consensus 14 ~~~~~v~IiGaG~iG~~ia~~L~~~-~~V~V~~R~~~~a~~la~~~~~~~~d~~~~~~l~~ll~~~DvVIn~~P~~~~~- 91 (365)
T 2z2v_A 14 GRHMKVLILGAGNIGRAIAWDLKDE-FDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPGFLGF- 91 (365)
T ss_dssp --CCEEEEECCSHHHHHHHHHHTTT-SEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSCEEECCCHHHHH-
T ss_pred CCCCeEEEEcCCHHHHHHHHHHHcC-CeEEEEECCHHHHHHHHhhCCeEEEecCCHHHHHHHHhCCCEEEECCChhhhH-
Confidence 3458999999999999999999998 999999999999998876431 11 235667788999999999865332
Q ss_pred HHhcCCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHh
Q 018506 117 DVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVS 156 (355)
Q Consensus 117 ~vl~~~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~ 156 (355)
.+... .++ .++.++|++...+. ..++.+...
T Consensus 92 ~v~~a---~l~-----~G~~~vD~s~~~~~-~~~l~~~Ak 122 (365)
T 2z2v_A 92 KSIKA---AIK-----SKVDMVDVSFMPEN-PLELRDEAE 122 (365)
T ss_dssp HHHHH---HHH-----TTCCEEECCCCSSC-GGGGHHHHH
T ss_pred HHHHH---HHH-----hCCeEEEccCCcHH-HHHHHHHHH
Confidence 33321 232 45678998876443 344444443
No 173
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=98.50 E-value=5.9e-07 Score=86.35 Aligned_cols=110 Identities=15% Similarity=0.232 Sum_probs=79.3
Q ss_pred CCCCCCCceEEEEcccHHhH-HHHHHHHHC-CCcE-EEEeCChhHHHHHHh-CCCC-----CCCCHHHHhh--cCCEEEE
Q 018506 39 QVPSCQFESVGFIGLGNMGF-RMASNLMKA-GYKM-AVHDVNCNVMKMFSD-MGVP-----TKETPFEVAE--ASDVVIT 107 (355)
Q Consensus 39 ~~~~~~~mkIgiIG~G~mG~-~ia~~L~~~-G~~V-~v~dr~~~~~~~l~~-~g~~-----~~~s~~e~~~--~aDiVi~ 107 (355)
+.+.++++||||||+|.||. .++..|.+. ++++ .++|+++++.+.+.+ .|+. ..++.+++++ +.|+|++
T Consensus 77 ~~~~~~~irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~ll~~~~vD~V~i 156 (433)
T 1h6d_A 77 PMPEDRRFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVYI 156 (433)
T ss_dssp CCCCCCCEEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSSGGGGGGCTTCCEEEE
T ss_pred CCCCCCceEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCcccccccCCHHHHhcCCCCCEEEE
Confidence 44456778999999999997 899999875 4564 688999999888765 4554 5778889886 7899999
Q ss_pred eCCCchHHHHHhcCCCccccCCCCCCCeEEEEc-CCCCHHHHHHHHHHHh
Q 018506 108 MLPSSSHVLDVYNGPNGLLQGGNSVRPQLLIDS-STIDPQTSRNISAAVS 156 (355)
Q Consensus 108 ~v~~~~~~~~vl~~~~~~l~~~~~~~~~ivi~~-st~~~~~~~~l~~~~~ 156 (355)
|+|+....+.+.. .++. +..++++. .+....+.+++.+...
T Consensus 157 atp~~~h~~~~~~----al~a----Gk~Vl~EKPla~~~~e~~~l~~~a~ 198 (433)
T 1h6d_A 157 ILPNSLHAEFAIR----AFKA----GKHVMCEKPMATSVADCQRMIDAAK 198 (433)
T ss_dssp CSCGGGHHHHHHH----HHHT----TCEEEECSSCCSSHHHHHHHHHHHH
T ss_pred cCCchhHHHHHHH----HHHC----CCcEEEcCCCCCCHHHHHHHHHHHH
Confidence 9998766555543 2332 11355553 3456777777776654
No 174
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=98.49 E-value=1.7e-07 Score=90.70 Aligned_cols=101 Identities=14% Similarity=0.098 Sum_probs=74.9
Q ss_pred CCCCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHHHHhcC
Q 018506 42 SCQFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNG 121 (355)
Q Consensus 42 ~~~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl~~ 121 (355)
...-++|+|||+|.||..+|+.|...|.+|++|||++.+.......|+.. .+++++++.+|+|++++.+...+ ..
T Consensus 274 ~L~GktVgIIG~G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~~~G~~~-~~l~ell~~aDiVi~~~~t~~lI----~~ 348 (494)
T 3d64_A 274 MIAGKIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQAAMEGYRV-VTMEYAADKADIFVTATGNYHVI----NH 348 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSCHHHHHHHHTTTCEE-CCHHHHTTTCSEEEECSSSSCSB----CH
T ss_pred ccCCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCChHhHHHHHHcCCEe-CCHHHHHhcCCEEEECCCccccc----CH
Confidence 34557899999999999999999999999999999998754444456554 48999999999999998543222 10
Q ss_pred CCccccCCCCCCCeEEEEcCCCCHH-HHHHH
Q 018506 122 PNGLLQGGNSVRPQLLIDSSTIDPQ-TSRNI 151 (355)
Q Consensus 122 ~~~~l~~~~~~~~~ivi~~st~~~~-~~~~l 151 (355)
..++.+ .++.++||++..... ....+
T Consensus 349 --~~l~~M--K~gAilINvgrg~veID~~aL 375 (494)
T 3d64_A 349 --DHMKAM--RHNAIVCNIGHFDSEIDVAST 375 (494)
T ss_dssp --HHHHHC--CTTEEEEECSSSSCSBCCGGG
T ss_pred --HHHhhC--CCCcEEEEcCCCcchhchHHH
Confidence 122222 257899999998763 44445
No 175
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=98.48 E-value=1.9e-07 Score=85.11 Aligned_cols=104 Identities=10% Similarity=-0.008 Sum_probs=72.1
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCC-cEEEEeCChhHHHHHHhC-CC---CCC--CCHHHHhhcCCEEEEeCCCchHH-
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGY-KMAVHDVNCNVMKMFSDM-GV---PTK--ETPFEVAEASDVVITMLPSSSHV- 115 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~-~V~v~dr~~~~~~~l~~~-g~---~~~--~s~~e~~~~aDiVi~~v~~~~~~- 115 (355)
..++|.|||+|.||.+++..|.+.|. +|++|||++++++.+.+. +. ... +++.+.+..+|+||.|+|....-
T Consensus 140 ~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~~~~~~~~~~~aDivIn~t~~~~~~~ 219 (297)
T 2egg_A 140 DGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYFSLAEAETRLAEYDIIINTTSVGMHPR 219 (297)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEECHHHHHHTGGGCSEEEECSCTTCSSC
T ss_pred CCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCceeeHHHHHhhhccCCEEEECCCCCCCCC
Confidence 45789999999999999999999998 899999999999888753 22 221 24556678999999999875320
Q ss_pred -HHHhcCCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHH
Q 018506 116 -LDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAV 155 (355)
Q Consensus 116 -~~vl~~~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~ 155 (355)
+.+... ...+ .++.+++|++.. |..+. +.+..
T Consensus 220 ~~~~~i~-~~~l-----~~~~~v~D~~y~-P~~T~-ll~~A 252 (297)
T 2egg_A 220 VEVQPLS-LERL-----RPGVIVSDIIYN-PLETK-WLKEA 252 (297)
T ss_dssp CSCCSSC-CTTC-----CTTCEEEECCCS-SSSCH-HHHHH
T ss_pred CCCCCCC-HHHc-----CCCCEEEEcCCC-CCCCH-HHHHH
Confidence 000000 1122 256799999986 44433 44443
No 176
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=98.48 E-value=9e-07 Score=78.03 Aligned_cols=71 Identities=17% Similarity=0.193 Sum_probs=53.5
Q ss_pred CCCceEEEEcccHHhHHHHHHHHHCCCcEE-EEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHHHHhc
Q 018506 43 CQFESVGFIGLGNMGFRMASNLMKAGYKMA-VHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYN 120 (355)
Q Consensus 43 ~~~mkIgiIG~G~mG~~ia~~L~~~G~~V~-v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl~ 120 (355)
|+||||+|+|+|.||+.+++.+.+.++++. ++||+++. ..++...++++++. ++|+||-+.. |..+...+.
T Consensus 1 M~MmkI~ViGaGrMG~~i~~~l~~~~~eLva~~d~~~~~-----~~gv~v~~dl~~l~-~~DVvIDft~-p~a~~~~~~ 72 (243)
T 3qy9_A 1 MASMKILLIGYGAMNQRVARLAEEKGHEIVGVIENTPKA-----TTPYQQYQHIADVK-GADVAIDFSN-PNLLFPLLD 72 (243)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCC-------CCSCBCSCTTTCT-TCSEEEECSC-HHHHHHHHT
T ss_pred CCceEEEEECcCHHHHHHHHHHHhCCCEEEEEEecCccc-----cCCCceeCCHHHHh-CCCEEEEeCC-hHHHHHHHH
Confidence 357999999999999999999999887754 57887663 36788888888888 9999985543 345555553
No 177
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=98.47 E-value=5.3e-07 Score=84.47 Aligned_cols=106 Identities=11% Similarity=0.192 Sum_probs=76.8
Q ss_pred CCCceEEEEcccHHhHH-HHHHHHHC-CCcEE-EEeCChhHHHHHHhC--CCCCCCCHHHHhhc--CCEEEEeCCCchHH
Q 018506 43 CQFESVGFIGLGNMGFR-MASNLMKA-GYKMA-VHDVNCNVMKMFSDM--GVPTKETPFEVAEA--SDVVITMLPSSSHV 115 (355)
Q Consensus 43 ~~~mkIgiIG~G~mG~~-ia~~L~~~-G~~V~-v~dr~~~~~~~l~~~--g~~~~~s~~e~~~~--aDiVi~~v~~~~~~ 115 (355)
|+++||||||+|.||.. ++..|.+. +.++. ++|+++++++.+.+. +....++.++++++ .|+|++|+|+....
T Consensus 3 M~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~ 82 (359)
T 3m2t_A 3 LSLIKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDSDLERARRVHRFISDIPVLDNVPAMLNQVPLDAVVMAGPPQLHF 82 (359)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECSSHHHHGGGGGTSCSCCEESSHHHHHHHSCCSEEEECSCHHHHH
T ss_pred CCcceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHhcCCCcccCCHHHHhcCCCCCEEEEcCCcHHHH
Confidence 45689999999999995 89999876 56765 889999999988874 45678899999875 49999999987665
Q ss_pred HHHhcCCCccccCCCCCCCeEEEEc-CCCCHHHHHHHHHHHh
Q 018506 116 LDVYNGPNGLLQGGNSVRPQLLIDS-STIDPQTSRNISAAVS 156 (355)
Q Consensus 116 ~~vl~~~~~~l~~~~~~~~~ivi~~-st~~~~~~~~l~~~~~ 156 (355)
+.+.. .++. +..++++. -+....+.+++.+...
T Consensus 83 ~~~~~----al~a----GkhVl~EKPla~~~~e~~~l~~~a~ 116 (359)
T 3m2t_A 83 EMGLL----AMSK----GVNVFVEKPPCATLEELETLIDAAR 116 (359)
T ss_dssp HHHHH----HHHT----TCEEEECSCSCSSHHHHHHHHHHHH
T ss_pred HHHHH----HHHC----CCeEEEECCCcCCHHHHHHHHHHHH
Confidence 55443 2332 11355543 2455667777766654
No 178
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=98.47 E-value=7.9e-07 Score=86.51 Aligned_cols=115 Identities=16% Similarity=0.200 Sum_probs=82.4
Q ss_pred CCCCCCCCceEEEEcc----cHHhHHHHHHHHHC--CCcE-EEEeCChhHHHHHHh-CCCC---CCCCHHHHhh--cCCE
Q 018506 38 SQVPSCQFESVGFIGL----GNMGFRMASNLMKA--GYKM-AVHDVNCNVMKMFSD-MGVP---TKETPFEVAE--ASDV 104 (355)
Q Consensus 38 ~~~~~~~~mkIgiIG~----G~mG~~ia~~L~~~--G~~V-~v~dr~~~~~~~l~~-~g~~---~~~s~~e~~~--~aDi 104 (355)
++++.|+++||||||+ |.||...+..|.+. +.+| .++|+++++++.+.+ .|+. ..++.+++++ +.|+
T Consensus 32 ~~~~~m~~irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~~~~~d~~ell~~~~vD~ 111 (479)
T 2nvw_A 32 STVPSSRPIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQLKHATGFDSLESFAQYKDIDM 111 (479)
T ss_dssp GSSGGGCCEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTTCTTCEEESCHHHHHHCTTCSE
T ss_pred CCCCCCCcCEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHcCCCcceeeCCHHHHhcCCCCCE
Confidence 3444567789999999 99999999999986 6675 588999999988776 4654 6789999985 6899
Q ss_pred EEEeCCCchHHHHHhcCCCccccCCC-CCC-CeEEEEc-CCCCHHHHHHHHHHHh
Q 018506 105 VITMLPSSSHVLDVYNGPNGLLQGGN-SVR-PQLLIDS-STIDPQTSRNISAAVS 156 (355)
Q Consensus 105 Vi~~v~~~~~~~~vl~~~~~~l~~~~-~~~-~~ivi~~-st~~~~~~~~l~~~~~ 156 (355)
|++|+|+....+.+.. .++.+. .++ ..++++. .+..+.+.+++.+...
T Consensus 112 V~I~tp~~~H~~~~~~----al~aG~~~~~~khVl~EKPla~~~~ea~~l~~~a~ 162 (479)
T 2nvw_A 112 IVVSVKVPEHYEVVKN----ILEHSSQNLNLRYLYVEWALAASVQQAEELYSISQ 162 (479)
T ss_dssp EEECSCHHHHHHHHHH----HHHHSSSCSSCCEEEEESSSSSSHHHHHHHHHHHH
T ss_pred EEEcCCcHHHHHHHHH----HHHCCCCcCCceeEEEeCCCcCCHHHHHHHHHHHH
Confidence 9999998766655543 232210 000 2477765 4556777777776654
No 179
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=98.45 E-value=5.2e-07 Score=82.76 Aligned_cols=67 Identities=18% Similarity=0.147 Sum_probs=51.9
Q ss_pred CceEEEEcccHHhHHHHHHHHHCCC-cEEEEeCChhHHHHHHh---C-------CC--CCCCCHHHHhhcCCEEEEeCCC
Q 018506 45 FESVGFIGLGNMGFRMASNLMKAGY-KMAVHDVNCNVMKMFSD---M-------GV--PTKETPFEVAEASDVVITMLPS 111 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~~G~-~V~v~dr~~~~~~~l~~---~-------g~--~~~~s~~e~~~~aDiVi~~v~~ 111 (355)
+|||+|||+|.||.+++..|+..|+ +|.++|+++++++.... . .. ..+++. ++++++|+||+++..
T Consensus 2 ~~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~a~g~ 80 (309)
T 1ur5_A 2 RKKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-ADTANSDVIVVTSGA 80 (309)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-GGGTTCSEEEECCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCCH-HHHCCCCEEEEcCCC
Confidence 3799999999999999999999997 99999999877654211 1 11 223565 778999999999854
Q ss_pred c
Q 018506 112 S 112 (355)
Q Consensus 112 ~ 112 (355)
+
T Consensus 81 p 81 (309)
T 1ur5_A 81 P 81 (309)
T ss_dssp -
T ss_pred C
Confidence 4
No 180
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=98.44 E-value=5.2e-07 Score=82.75 Aligned_cols=91 Identities=22% Similarity=0.315 Sum_probs=67.5
Q ss_pred CCceEEEEcccHHhHHHHHHHHHC--CCcEEEEeCChhHHHHHHh-----CCC--CCCCCHHHHhhcCCEEEEeCCCchH
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKA--GYKMAVHDVNCNVMKMFSD-----MGV--PTKETPFEVAEASDVVITMLPSSSH 114 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~--G~~V~v~dr~~~~~~~l~~-----~g~--~~~~s~~e~~~~aDiVi~~v~~~~~ 114 (355)
...+|+|||+|.||..++..|.+. ..+|.+|||+ +.+++.+ .|+ ..+ +++++++++|+||+|+|...
T Consensus 120 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~--~a~~la~~l~~~~g~~~~~~-~~~eav~~aDIVi~aT~s~~- 195 (313)
T 3hdj_A 120 RSSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY--ASPEILERIGRRCGVPARMA-APADIAAQADIVVTATRSTT- 195 (313)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT--CCHHHHHHHHHHHTSCEEEC-CHHHHHHHCSEEEECCCCSS-
T ss_pred CCcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc--HHHHHHHHHHHhcCCeEEEe-CHHHHHhhCCEEEEccCCCC-
Confidence 447899999999999999999873 3679999998 5444433 244 345 89999999999999998752
Q ss_pred HHHHhcCCCccccCCCCCCCeEEEEcCCCCHHH
Q 018506 115 VLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQT 147 (355)
Q Consensus 115 ~~~vl~~~~~~l~~~~~~~~~ivi~~st~~~~~ 147 (355)
.++. ..+++ ++.+|+++++..|..
T Consensus 196 --pvl~--~~~l~-----~G~~V~~vGs~~p~~ 219 (313)
T 3hdj_A 196 --PLFA--GQALR-----AGAFVGAIGSSLPHT 219 (313)
T ss_dssp --CSSC--GGGCC-----TTCEEEECCCSSTTC
T ss_pred --cccC--HHHcC-----CCcEEEECCCCCCch
Confidence 2222 12332 567999999988763
No 181
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=98.44 E-value=6.1e-07 Score=82.08 Aligned_cols=101 Identities=20% Similarity=0.193 Sum_probs=62.3
Q ss_pred CCCceEEEEcccHHhHHHHHHHHHC-CCcEE-EEeCChhHHHHHHhCCCCC--CCCHHHHhhcCCEEEEeCCCchHHHHH
Q 018506 43 CQFESVGFIGLGNMGFRMASNLMKA-GYKMA-VHDVNCNVMKMFSDMGVPT--KETPFEVAEASDVVITMLPSSSHVLDV 118 (355)
Q Consensus 43 ~~~mkIgiIG~G~mG~~ia~~L~~~-G~~V~-v~dr~~~~~~~l~~~g~~~--~~s~~e~~~~aDiVi~~v~~~~~~~~v 118 (355)
|+++||||||+|+||..++..|.+. ++++. ++|+++++++. .|+.. .+++.+. .++|+|++|+|.....+.+
T Consensus 7 M~~irv~IIG~G~iG~~~~~~l~~~~~~elvav~d~~~~~~~~---~g~~~~~~~~l~~~-~~~DvViiatp~~~h~~~~ 82 (304)
T 3bio_A 7 DKKIRAAIVGYGNIGRYALQALREAPDFEIAGIVRRNPAEVPF---ELQPFRVVSDIEQL-ESVDVALVCSPSREVERTA 82 (304)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECC----------CCTTSCEESSGGGS-SSCCEEEECSCHHHHHHHH
T ss_pred CCCCEEEEECChHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHH---cCCCcCCHHHHHhC-CCCCEEEECCCchhhHHHH
Confidence 4568999999999999999999874 56766 78999988765 45432 3344444 6899999999977555444
Q ss_pred hcCCCccccCCCCCCCeEEEEcCCC---CHHHHHHHHHHHh
Q 018506 119 YNGPNGLLQGGNSVRPQLLIDSSTI---DPQTSRNISAAVS 156 (355)
Q Consensus 119 l~~~~~~l~~~~~~~~~ivi~~st~---~~~~~~~l~~~~~ 156 (355)
.. .++ .++.+++.+.. .+.+.+++.+...
T Consensus 83 ~~----al~-----aG~~Vi~ekP~~a~~~~~~~~l~~~a~ 114 (304)
T 3bio_A 83 LE----ILK-----KGICTADSFDIHDGILALRRSLGDAAG 114 (304)
T ss_dssp HH----HHT-----TTCEEEECCCCGGGHHHHHHHHHHHHH
T ss_pred HH----HHH-----cCCeEEECCCCCCCCHHHHHHHHHHHH
Confidence 32 332 34566666442 3444555555543
No 182
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=98.44 E-value=2.3e-07 Score=87.41 Aligned_cols=94 Identities=15% Similarity=0.179 Sum_probs=67.6
Q ss_pred CceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCC-----------------------------CCH
Q 018506 45 FESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTK-----------------------------ETP 95 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~-----------------------------~s~ 95 (355)
..||+|||+|.+|..+++.+...|.+|++||+++++.+.+.+.|.... .++
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~~l 269 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAALV 269 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHHHH
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHhHH
Confidence 478999999999999999999999999999999999888877665321 146
Q ss_pred HHHhhcCCEEEEeCCCch-HHHHHhcCCCccccCCCCCCCeEEEEcCC
Q 018506 96 FEVAEASDVVITMLPSSS-HVLDVYNGPNGLLQGGNSVRPQLLIDSST 142 (355)
Q Consensus 96 ~e~~~~aDiVi~~v~~~~-~~~~vl~~~~~~l~~~~~~~~~ivi~~st 142 (355)
.++++++|+||.++..+. ....++. ++.++.++ ++.+|||++.
T Consensus 270 ~e~l~~aDVVI~tvlipg~~ap~Lvt--~emv~~Mk--~GsVIVDvA~ 313 (405)
T 4dio_A 270 AEHIAKQDIVITTALIPGRPAPRLVT--REMLDSMK--PGSVVVDLAV 313 (405)
T ss_dssp HHHHHTCSEEEECCCCSSSCCCCCBC--HHHHTTSC--TTCEEEETTG
T ss_pred HHHhcCCCEEEECCcCCCCCCCEEec--HHHHhcCC--CCCEEEEEeC
Confidence 778899999999863221 0001111 12333322 5678888864
No 183
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=98.43 E-value=5.9e-07 Score=83.11 Aligned_cols=106 Identities=14% Similarity=0.176 Sum_probs=74.4
Q ss_pred CCCceEEEEcccHHhHHHHHHHHHCC-Cc-EEEEeCChhHHHHHHhC-CCC-CCCCHHHHhh--cCCEEEEeCCCchHHH
Q 018506 43 CQFESVGFIGLGNMGFRMASNLMKAG-YK-MAVHDVNCNVMKMFSDM-GVP-TKETPFEVAE--ASDVVITMLPSSSHVL 116 (355)
Q Consensus 43 ~~~mkIgiIG~G~mG~~ia~~L~~~G-~~-V~v~dr~~~~~~~l~~~-g~~-~~~s~~e~~~--~aDiVi~~v~~~~~~~ 116 (355)
++++||||||+|.||..++..|.+.+ .+ +.++||++++++.+.+. ++. ..++.+++++ +.|+|++|+|+....+
T Consensus 3 m~~~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~ 82 (329)
T 3evn_A 3 LSKVRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTLESAQAFANKYHLPKAYDKLEDMLADESIDVIYVATINQDHYK 82 (329)
T ss_dssp --CEEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSCSSTTCC---CCCCSCEESCHHHHHTCTTCCEEEECSCGGGHHH
T ss_pred CCceEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEECCCcHHHHH
Confidence 45689999999999999999998764 45 45889999998877663 554 6789999987 7999999999876655
Q ss_pred HHhcCCCccccCCCCCCCeEEEEcC-CCCHHHHHHHHHHHh
Q 018506 117 DVYNGPNGLLQGGNSVRPQLLIDSS-TIDPQTSRNISAAVS 156 (355)
Q Consensus 117 ~vl~~~~~~l~~~~~~~~~ivi~~s-t~~~~~~~~l~~~~~ 156 (355)
.+.. .++. +..++++-- +..+.+.+++.+...
T Consensus 83 ~~~~----al~a----Gk~Vl~EKP~a~~~~e~~~l~~~a~ 115 (329)
T 3evn_A 83 VAKA----ALLA----GKHVLVEKPFTLTYDQANELFALAE 115 (329)
T ss_dssp HHHH----HHHT----TCEEEEESSCCSSHHHHHHHHHHHH
T ss_pred HHHH----HHHC----CCeEEEccCCcCCHHHHHHHHHHHH
Confidence 5443 2332 223555543 556777777776654
No 184
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=98.41 E-value=2.3e-07 Score=86.75 Aligned_cols=66 Identities=21% Similarity=0.230 Sum_probs=56.6
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCC-------------------------CHHHH
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKE-------------------------TPFEV 98 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~-------------------------s~~e~ 98 (355)
...||+|||+|.+|..+++.+...|.+|++|||++++.+.+.+.|..... ++.++
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e~ 262 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALEDA 262 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHHH
Confidence 34689999999999999999999999999999999999888877654322 45678
Q ss_pred hhcCCEEEEeC
Q 018506 99 AEASDVVITML 109 (355)
Q Consensus 99 ~~~aDiVi~~v 109 (355)
++++|+||.++
T Consensus 263 l~~aDIVI~tv 273 (381)
T 3p2y_A 263 ITKFDIVITTA 273 (381)
T ss_dssp HTTCSEEEECC
T ss_pred HhcCCEEEECC
Confidence 89999999986
No 185
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=98.39 E-value=2.7e-07 Score=74.09 Aligned_cols=69 Identities=17% Similarity=0.303 Sum_probs=51.8
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCC----CCCHHH---H-hhcCCEEEEeCCCc
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPT----KETPFE---V-AEASDVVITMLPSS 112 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~----~~s~~e---~-~~~aDiVi~~v~~~ 112 (355)
++++|.|+|+|.+|..++..|.+.|++|+++++++++.+.+.+.+... ..+.+. + ...+|+||.+++.+
T Consensus 5 ~~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~ 81 (144)
T 2hmt_A 5 KNKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGAN 81 (144)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCSC
T ss_pred cCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCc
Confidence 456799999999999999999999999999999999887776544321 112222 1 45688888888764
No 186
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=98.39 E-value=1.7e-06 Score=80.06 Aligned_cols=104 Identities=14% Similarity=0.149 Sum_probs=77.1
Q ss_pred CceEEEEcccHHhHHHHHHHHHCCC---c-EEEEeCChhHHHHHHh-CCC-CCCCCHHHHhh--cCCEEEEeCCCchHHH
Q 018506 45 FESVGFIGLGNMGFRMASNLMKAGY---K-MAVHDVNCNVMKMFSD-MGV-PTKETPFEVAE--ASDVVITMLPSSSHVL 116 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~~G~---~-V~v~dr~~~~~~~l~~-~g~-~~~~s~~e~~~--~aDiVi~~v~~~~~~~ 116 (355)
++||||||+|.||..++..|.+.+. + |.++||++++++.+.+ .++ ...++.+++++ +.|+|++|+|+....+
T Consensus 2 ~~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~ 81 (334)
T 3ohs_X 2 ALRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKHDIPKAYGSYEELAKDPNVEVAYVGTQHPQHKA 81 (334)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECSSHHHHHHHHHHHTCSCEESSHHHHHHCTTCCEEEECCCGGGHHH
T ss_pred ccEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEECCCcHHHHH
Confidence 4799999999999999999987643 4 5688999999988876 455 46789999987 6999999999886665
Q ss_pred HHhcCCCccccCCCCCCCeEEEEc-CCCCHHHHHHHHHHHh
Q 018506 117 DVYNGPNGLLQGGNSVRPQLLIDS-STIDPQTSRNISAAVS 156 (355)
Q Consensus 117 ~vl~~~~~~l~~~~~~~~~ivi~~-st~~~~~~~~l~~~~~ 156 (355)
.+.. .++. +..++++- -+....+.+++.+...
T Consensus 82 ~~~~----al~~----GkhVl~EKP~a~~~~e~~~l~~~a~ 114 (334)
T 3ohs_X 82 AVML----CLAA----GKAVLCEKPMGVNAAEVREMVTEAR 114 (334)
T ss_dssp HHHH----HHHT----TCEEEEESSSSSSHHHHHHHHHHHH
T ss_pred HHHH----HHhc----CCEEEEECCCCCCHHHHHHHHHHHH
Confidence 5443 2332 22356553 3556777777777654
No 187
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=98.39 E-value=2.7e-07 Score=82.11 Aligned_cols=90 Identities=13% Similarity=0.084 Sum_probs=66.6
Q ss_pred eEEEEcccHHhHHHHHHHHHCCC-cEEEEeCChhHHHHHHhC-CCCCCCCHHHHhhcCCEEEEeCCCchHHHHHhcCC-C
Q 018506 47 SVGFIGLGNMGFRMASNLMKAGY-KMAVHDVNCNVMKMFSDM-GVPTKETPFEVAEASDVVITMLPSSSHVLDVYNGP-N 123 (355)
Q Consensus 47 kIgiIG~G~mG~~ia~~L~~~G~-~V~v~dr~~~~~~~l~~~-g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl~~~-~ 123 (355)
+|+|||+|.||.+++..|.+.|. +|+++||++++++.+.+. +.....++.++++++|+||.++|.... .+ ...+ .
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~~~~~~~~~~~~~~~aDiVInatp~gm~-p~-~~~i~~ 187 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPVKIFSLDQLDEVVKKAKSLFNTTSVGMK-GE-ELPVSD 187 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSCEEEEGGGHHHHHHTCSEEEECSSTTTT-SC-CCSCCH
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcccCCHHHHHhhhcCCCEEEECCCCCCC-CC-CCCCCH
Confidence 89999999999999999999998 899999999999888653 222345677888899999999975311 00 0001 1
Q ss_pred ccccCCCCCCCeEEEEcCCC
Q 018506 124 GLLQGGNSVRPQLLIDSSTI 143 (355)
Q Consensus 124 ~~l~~~~~~~~~ivi~~st~ 143 (355)
..+. ++.+++|+...
T Consensus 188 ~~l~-----~~~~V~Divy~ 202 (253)
T 3u62_A 188 DSLK-----NLSLVYDVIYF 202 (253)
T ss_dssp HHHT-----TCSEEEECSSS
T ss_pred HHhC-----cCCEEEEeeCC
Confidence 1221 45689999887
No 188
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=98.37 E-value=1.9e-06 Score=80.72 Aligned_cols=107 Identities=15% Similarity=0.178 Sum_probs=75.7
Q ss_pred CCCceEEEEcccHHhHHHHHHHHHC-CCcE-EEEeCChhHHHHHHh-CC----CCCCCCHHHHhh--cCCEEEEeCCCch
Q 018506 43 CQFESVGFIGLGNMGFRMASNLMKA-GYKM-AVHDVNCNVMKMFSD-MG----VPTKETPFEVAE--ASDVVITMLPSSS 113 (355)
Q Consensus 43 ~~~mkIgiIG~G~mG~~ia~~L~~~-G~~V-~v~dr~~~~~~~l~~-~g----~~~~~s~~e~~~--~aDiVi~~v~~~~ 113 (355)
++++||||||+|.||..++..|.+. ++++ .++|+++++.+.+.+ .+ ....++.+++++ +.|+|++|+|+..
T Consensus 4 ~~~~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~~~~~~~~~a~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~ 83 (362)
T 1ydw_A 4 ETQIRIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIHGSYESLLEDPEIDALYVPLPTSL 83 (362)
T ss_dssp --CEEEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEESSHHHHHHCTTCCEEEECCCGGG
T ss_pred CCceEEEEECchHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCCCeeeCCHHHHhcCCCCCEEEEcCChHH
Confidence 4568999999999999999999875 4565 588999999888765 34 345678999886 5899999999875
Q ss_pred HHHHHhcCCCccccCCCCCCCeEEEEc-CCCCHHHHHHHHHHHhh
Q 018506 114 HVLDVYNGPNGLLQGGNSVRPQLLIDS-STIDPQTSRNISAAVSN 157 (355)
Q Consensus 114 ~~~~vl~~~~~~l~~~~~~~~~ivi~~-st~~~~~~~~l~~~~~~ 157 (355)
..+.+.. .++. +..++++. .+....+.+++.+...+
T Consensus 84 h~~~~~~----al~a----Gk~V~~EKP~a~~~~e~~~l~~~a~~ 120 (362)
T 1ydw_A 84 HVEWAIK----AAEK----GKHILLEKPVAMNVTEFDKIVDACEA 120 (362)
T ss_dssp HHHHHHH----HHTT----TCEEEECSSCSSSHHHHHHHHHHHHT
T ss_pred HHHHHHH----HHHC----CCeEEEecCCcCCHHHHHHHHHHHHH
Confidence 5544432 3332 11355543 35567777777776653
No 189
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=98.37 E-value=1.1e-06 Score=80.80 Aligned_cols=70 Identities=17% Similarity=0.245 Sum_probs=54.1
Q ss_pred CCCceEEEEcccHHhHHHHHHHHHCCC-cEEEEeCChhHHHH----HHhC------CCCCC-CCHHHHhhcCCEEEEeCC
Q 018506 43 CQFESVGFIGLGNMGFRMASNLMKAGY-KMAVHDVNCNVMKM----FSDM------GVPTK-ETPFEVAEASDVVITMLP 110 (355)
Q Consensus 43 ~~~mkIgiIG~G~mG~~ia~~L~~~G~-~V~v~dr~~~~~~~----l~~~------g~~~~-~s~~e~~~~aDiVi~~v~ 110 (355)
|++|||+|||+|.||.+++..|+..|+ +|.++|+++++++. +.+. ..... ++..+++++||+||++..
T Consensus 3 m~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~d~~a~~~aDvVIi~ag 82 (321)
T 3p7m_A 3 MARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTNDYKDLENSDVVIVTAG 82 (321)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGGGTTCSEEEECCS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcCCHHHHCCCCEEEEcCC
Confidence 567899999999999999999999988 99999999887642 3221 23332 234578899999999964
Q ss_pred Cc
Q 018506 111 SS 112 (355)
Q Consensus 111 ~~ 112 (355)
.+
T Consensus 83 ~p 84 (321)
T 3p7m_A 83 VP 84 (321)
T ss_dssp CC
T ss_pred cC
Confidence 43
No 190
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=98.35 E-value=6.2e-07 Score=82.57 Aligned_cols=70 Identities=17% Similarity=0.179 Sum_probs=53.6
Q ss_pred CCCCceEEEEcccHHhHHHHHHHHHCCC-cEEEEeCChhHHH----HHHh------CCCCC--CCCHHHHhhcCCEEEEe
Q 018506 42 SCQFESVGFIGLGNMGFRMASNLMKAGY-KMAVHDVNCNVMK----MFSD------MGVPT--KETPFEVAEASDVVITM 108 (355)
Q Consensus 42 ~~~~mkIgiIG~G~mG~~ia~~L~~~G~-~V~v~dr~~~~~~----~l~~------~g~~~--~~s~~e~~~~aDiVi~~ 108 (355)
.|++|||+|||+|.||.+++..|+..|+ +|.+||+++++++ .+.+ ..... +++. +++++||+||++
T Consensus 4 ~m~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d~-~a~~~aDiVIia 82 (324)
T 3gvi_A 4 SMARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGANDY-AAIEGADVVIVT 82 (324)
T ss_dssp --CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESSG-GGGTTCSEEEEC
T ss_pred CCcCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCCH-HHHCCCCEEEEc
Confidence 3567899999999999999999999999 9999999988764 2222 12332 3444 888999999999
Q ss_pred CCCc
Q 018506 109 LPSS 112 (355)
Q Consensus 109 v~~~ 112 (355)
...+
T Consensus 83 ag~p 86 (324)
T 3gvi_A 83 AGVP 86 (324)
T ss_dssp CSCC
T ss_pred cCcC
Confidence 7533
No 191
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=98.34 E-value=3.7e-07 Score=82.17 Aligned_cols=96 Identities=15% Similarity=0.071 Sum_probs=66.7
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCC-cEEEEeCChhHHHHHHhCC-CCCCCCHHHHhhcCCEEEEeCCCch--HHHHHh
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGY-KMAVHDVNCNVMKMFSDMG-VPTKETPFEVAEASDVVITMLPSSS--HVLDVY 119 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~-~V~v~dr~~~~~~~l~~~g-~~~~~s~~e~~~~aDiVi~~v~~~~--~~~~vl 119 (355)
..+++.|||+|.||.+++..|.+.|. +|++++|++++++.+.+.. .....++.+++.++|+||.++|... .....+
T Consensus 116 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~~aDiVInaTp~Gm~~~~~~~l 195 (277)
T 3don_A 116 EDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNINKINLSHAESHLDEFDIIINTTPAGMNGNTDSVI 195 (277)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCSCCEEECHHHHHHTGGGCSEEEECCC-------CCSS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhcccccHhhHHHHhcCCCEEEECccCCCCCCCcCCC
Confidence 34689999999999999999999998 8999999999987776421 1122345566789999999998641 111111
Q ss_pred cCCCccccCCCCCCCeEEEEcCCCCHH
Q 018506 120 NGPNGLLQGGNSVRPQLLIDSSTIDPQ 146 (355)
Q Consensus 120 ~~~~~~l~~~~~~~~~ivi~~st~~~~ 146 (355)
. ...+ .++.+++|+...+..
T Consensus 196 -~-~~~l-----~~~~~V~D~vY~P~~ 215 (277)
T 3don_A 196 -S-LNRL-----ASHTLVSDIVYNPYK 215 (277)
T ss_dssp -C-CTTC-----CSSCEEEESCCSSSS
T ss_pred -C-HHHc-----CCCCEEEEecCCCCC
Confidence 1 1122 245799999987443
No 192
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=98.34 E-value=1.2e-06 Score=84.91 Aligned_cols=92 Identities=16% Similarity=0.155 Sum_probs=73.0
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHH-HHhcCC
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVL-DVYNGP 122 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~-~vl~~~ 122 (355)
.-++|+|||+|.||..+++.+...|.+|+++|+++.+.+...+.|+. ..++.++++.+|+||.++++...+. ..+.
T Consensus 273 ~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~Ga~-~~~l~e~l~~aDvVi~atgt~~~i~~~~l~-- 349 (494)
T 3ce6_A 273 GGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQAMMEGFD-VVTVEEAIGDADIVVTATGNKDIIMLEHIK-- 349 (494)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCE-ECCHHHHGGGCSEEEECSSSSCSBCHHHHH--
T ss_pred CcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCE-EecHHHHHhCCCEEEECCCCHHHHHHHHHH--
Confidence 45789999999999999999999999999999999998777777876 3578888999999999998764332 2221
Q ss_pred CccccCCCCCCCeEEEEcCCCCH
Q 018506 123 NGLLQGGNSVRPQLLIDSSTIDP 145 (355)
Q Consensus 123 ~~~l~~~~~~~~~ivi~~st~~~ 145 (355)
.+ .++.++++.+....
T Consensus 350 --~m-----k~ggilvnvG~~~~ 365 (494)
T 3ce6_A 350 --AM-----KDHAILGNIGHFDN 365 (494)
T ss_dssp --HS-----CTTCEEEECSSSGG
T ss_pred --hc-----CCCcEEEEeCCCCC
Confidence 22 24568999988654
No 193
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=98.32 E-value=1.9e-06 Score=79.18 Aligned_cols=70 Identities=17% Similarity=0.273 Sum_probs=53.6
Q ss_pred CCCceEEEEcccHHhHHHHHHHHHCCC--cEEEEeCChhHHHH----HHh------CCCCCCCCHHHHhhcCCEEEEeCC
Q 018506 43 CQFESVGFIGLGNMGFRMASNLMKAGY--KMAVHDVNCNVMKM----FSD------MGVPTKETPFEVAEASDVVITMLP 110 (355)
Q Consensus 43 ~~~mkIgiIG~G~mG~~ia~~L~~~G~--~V~v~dr~~~~~~~----l~~------~g~~~~~s~~e~~~~aDiVi~~v~ 110 (355)
+..|||+|||+|.+|.+++..|+..|+ +|.++|+++++++. +.+ .......+..+++++||+||++.+
T Consensus 4 m~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~~~~~a~~~aDvVvi~ag 83 (317)
T 3d0o_A 4 FKGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKAGEYSDCHDADLVVICAG 83 (317)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEECCGGGGTTCSEEEECCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEeCCHHHhCCCCEEEECCC
Confidence 456899999999999999999998884 89999999876653 222 112223355778899999999986
Q ss_pred Cc
Q 018506 111 SS 112 (355)
Q Consensus 111 ~~ 112 (355)
.+
T Consensus 84 ~~ 85 (317)
T 3d0o_A 84 AA 85 (317)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 194
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=98.31 E-value=1.3e-06 Score=80.31 Aligned_cols=70 Identities=19% Similarity=0.146 Sum_probs=52.6
Q ss_pred CCCceEEEEcccHHhHHHHHHHHHCCC--cEEEEeCChhHHHHH----HhC------CCCCCCCHHHHhhcCCEEEEeCC
Q 018506 43 CQFESVGFIGLGNMGFRMASNLMKAGY--KMAVHDVNCNVMKMF----SDM------GVPTKETPFEVAEASDVVITMLP 110 (355)
Q Consensus 43 ~~~mkIgiIG~G~mG~~ia~~L~~~G~--~V~v~dr~~~~~~~l----~~~------g~~~~~s~~e~~~~aDiVi~~v~ 110 (355)
..++||+|||+|.||.+++..|...|. +|.++|+++++++.. .+. ......+..+++++||+||++.+
T Consensus 4 ~~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~~~~~al~~aDvViia~~ 83 (316)
T 1ldn_A 4 NGGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDDCRDADLVVICAG 83 (316)
T ss_dssp TTSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGGGTTTCSEEEECCS
T ss_pred CCCCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEcCcHHHhCCCCEEEEcCC
Confidence 456899999999999999999998775 899999998765532 221 11112345677899999999976
Q ss_pred Cc
Q 018506 111 SS 112 (355)
Q Consensus 111 ~~ 112 (355)
.+
T Consensus 84 ~~ 85 (316)
T 1ldn_A 84 AN 85 (316)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 195
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=98.30 E-value=7.9e-07 Score=85.89 Aligned_cols=68 Identities=15% Similarity=0.089 Sum_probs=53.8
Q ss_pred CceEEEEcccHH-hHHHHHHHHHC-----CCcEEEEeCChhHHHHHHhC------------CCCCCCCHHHHhhcCCEEE
Q 018506 45 FESVGFIGLGNM-GFRMASNLMKA-----GYKMAVHDVNCNVMKMFSDM------------GVPTKETPFEVAEASDVVI 106 (355)
Q Consensus 45 ~mkIgiIG~G~m-G~~ia~~L~~~-----G~~V~v~dr~~~~~~~l~~~------------g~~~~~s~~e~~~~aDiVi 106 (355)
.|||+|||+|.+ |.+++..|++. +++|.+||+++++++...+. .+..+++..+++++||+||
T Consensus 28 ~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~~~~~~~l~~~~~~~~I~~t~D~~eal~~AD~VV 107 (472)
T 1u8x_X 28 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTDPEEAFTDVDFVM 107 (472)
T ss_dssp CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESCHHHHHSSCSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCCEEEEECCHHHHHcCCCEEE
Confidence 469999999999 66688888887 67899999999886653221 1233567788999999999
Q ss_pred EeCCCc
Q 018506 107 TMLPSS 112 (355)
Q Consensus 107 ~~v~~~ 112 (355)
++++.+
T Consensus 108 iaag~~ 113 (472)
T 1u8x_X 108 AHIRVG 113 (472)
T ss_dssp ECCCTT
T ss_pred EcCCCc
Confidence 999874
No 196
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=98.30 E-value=1.1e-06 Score=76.23 Aligned_cols=68 Identities=15% Similarity=0.287 Sum_probs=54.4
Q ss_pred ceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHh-CCCCC----CCC---HHHH-hhcCCEEEEeCCCch
Q 018506 46 ESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSD-MGVPT----KET---PFEV-AEASDVVITMLPSSS 113 (355)
Q Consensus 46 mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~-~g~~~----~~s---~~e~-~~~aDiVi~~v~~~~ 113 (355)
|||.|+|+|.+|..+++.|.+.|++|+++|+++++++.+.+ .+... .++ +.++ ++++|+||++++++.
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~ 77 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTPRDE 77 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecCCcH
Confidence 78999999999999999999999999999999999988764 34321 122 2232 468999999998764
No 197
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=98.28 E-value=7.4e-07 Score=81.37 Aligned_cols=65 Identities=15% Similarity=0.236 Sum_probs=48.7
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCC--cEEEEeCChhH---HHHHHh---CCCCCCCCHHHHhhcCCEEEEeC
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGY--KMAVHDVNCNV---MKMFSD---MGVPTKETPFEVAEASDVVITML 109 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~--~V~v~dr~~~~---~~~l~~---~g~~~~~s~~e~~~~aDiVi~~v 109 (355)
.++||+|||+|.||..++..|+.+|+ +|.++|++++. +..+.. ..+..+.+. +++++||+||++.
T Consensus 13 ~~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~~~~~~i~~t~d~-~~l~~aD~Vi~aa 85 (303)
T 2i6t_A 13 TVNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFNLPNVEISKDL-SASAHSKVVIFTV 85 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHHHTCTTEEEESCG-GGGTTCSEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhhhcCCCeEEeCCH-HHHCCCCEEEEcC
Confidence 45899999999999999999999999 99999998752 222222 123344566 7789999999997
No 198
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=98.27 E-value=2e-06 Score=79.17 Aligned_cols=70 Identities=14% Similarity=0.130 Sum_probs=48.9
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCC--cEEEEeCChhHHH----HHHhC-----CCCCCCCHHHHhhcCCEEEEeCCCc
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGY--KMAVHDVNCNVMK----MFSDM-----GVPTKETPFEVAEASDVVITMLPSS 112 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~--~V~v~dr~~~~~~----~l~~~-----g~~~~~s~~e~~~~aDiVi~~v~~~ 112 (355)
++|||+|||+|.+|.+++..|+..|+ +|.++|+++++++ .+.+. ......+..+++++||+||++++.+
T Consensus 6 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~aDvVii~~g~p 85 (318)
T 1y6j_A 6 SRSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDYSDVKDCDVIVVTAGAN 85 (318)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CGGGGTTCSEEEECCCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEECCHHHhCCCCEEEEcCCCC
Confidence 34899999999999999999999988 8999999987643 23221 1112223467789999999998765
Q ss_pred h
Q 018506 113 S 113 (355)
Q Consensus 113 ~ 113 (355)
.
T Consensus 86 ~ 86 (318)
T 1y6j_A 86 R 86 (318)
T ss_dssp -
T ss_pred C
Confidence 3
No 199
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=98.27 E-value=9.2e-07 Score=80.31 Aligned_cols=66 Identities=14% Similarity=0.262 Sum_probs=52.3
Q ss_pred ceEEEEcccHHhHHHHHHHHHCCC--cEEEEeCChhHHHH----HHh----C--C--CCCCCCHHHHhhcCCEEEEeCCC
Q 018506 46 ESVGFIGLGNMGFRMASNLMKAGY--KMAVHDVNCNVMKM----FSD----M--G--VPTKETPFEVAEASDVVITMLPS 111 (355)
Q Consensus 46 mkIgiIG~G~mG~~ia~~L~~~G~--~V~v~dr~~~~~~~----l~~----~--g--~~~~~s~~e~~~~aDiVi~~v~~ 111 (355)
|||+|||+|.||.+++..|+..|+ +|.+||+++++++. +.+ . . +..+++ .++++++|+||++...
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d-~~a~~~aDiVViaag~ 79 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-YSLLKGSEIIVVTAGL 79 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-GGGGTTCSEEEECCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCC-HHHhCCCCEEEECCCC
Confidence 799999999999999999999998 89999999988641 221 1 1 222345 7888999999999754
Q ss_pred c
Q 018506 112 S 112 (355)
Q Consensus 112 ~ 112 (355)
+
T Consensus 80 ~ 80 (294)
T 1oju_A 80 A 80 (294)
T ss_dssp C
T ss_pred C
Confidence 4
No 200
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=98.26 E-value=4.2e-06 Score=80.61 Aligned_cols=107 Identities=12% Similarity=0.099 Sum_probs=75.6
Q ss_pred CCCCceEEEEcccHHhHHHHHHHHHC-CCcE-EEEeCChhHHHHHHh----CC---CCCCC----CHHHHhh--cCCEEE
Q 018506 42 SCQFESVGFIGLGNMGFRMASNLMKA-GYKM-AVHDVNCNVMKMFSD----MG---VPTKE----TPFEVAE--ASDVVI 106 (355)
Q Consensus 42 ~~~~mkIgiIG~G~mG~~ia~~L~~~-G~~V-~v~dr~~~~~~~l~~----~g---~~~~~----s~~e~~~--~aDiVi 106 (355)
.++++||||||+|.||...+..|.+. +.+| .++|+++++++.+.+ .| ....+ +.+++++ +.|+|+
T Consensus 17 ~~~~~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~~~ll~~~~vD~V~ 96 (444)
T 2ixa_A 17 NPKKVRIAFIAVGLRGQTHVENMARRDDVEIVAFADPDPYMVGRAQEILKKNGKKPAKVFGNGNDDYKNMLKDKNIDAVF 96 (444)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSCHHHHHHHHHHHHHTTCCCCEEECSSTTTHHHHTTCTTCCEEE
T ss_pred CCCCceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHHHhcCCCCCceeccCCCCHHHHhcCCCCCEEE
Confidence 35678999999999999999999875 5664 588999999887654 34 34566 8999986 589999
Q ss_pred EeCCCchHHHHHhcCCCccccCCCCCCCeEEEEc-CCCCHHHHHHHHHHHh
Q 018506 107 TMLPSSSHVLDVYNGPNGLLQGGNSVRPQLLIDS-STIDPQTSRNISAAVS 156 (355)
Q Consensus 107 ~~v~~~~~~~~vl~~~~~~l~~~~~~~~~ivi~~-st~~~~~~~~l~~~~~ 156 (355)
+|+|+....+.++. .++. ...++++. .+....+.+++.+...
T Consensus 97 i~tp~~~h~~~~~~----al~a----GkhV~~EKP~a~~~~ea~~l~~~a~ 139 (444)
T 2ixa_A 97 VSSPWEWHHEHGVA----AMKA----GKIVGMEVSGAITLEECWDYVKVSE 139 (444)
T ss_dssp ECCCGGGHHHHHHH----HHHT----TCEEEECCCCCSSHHHHHHHHHHHH
T ss_pred EcCCcHHHHHHHHH----HHHC----CCeEEEeCCCcCCHHHHHHHHHHHH
Confidence 99998876665543 2332 11355543 3445667777766554
No 201
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=98.26 E-value=4.4e-06 Score=78.31 Aligned_cols=104 Identities=19% Similarity=0.225 Sum_probs=72.3
Q ss_pred CCCceEEEEcccHHhHH-HHHHHHHC-CCcE-EEEeCChhHHHHHHhCCCCCCCCHHHHhh--cCCEEEEeCCCchHHHH
Q 018506 43 CQFESVGFIGLGNMGFR-MASNLMKA-GYKM-AVHDVNCNVMKMFSDMGVPTKETPFEVAE--ASDVVITMLPSSSHVLD 117 (355)
Q Consensus 43 ~~~mkIgiIG~G~mG~~-ia~~L~~~-G~~V-~v~dr~~~~~~~l~~~g~~~~~s~~e~~~--~aDiVi~~v~~~~~~~~ 117 (355)
++++||||||+|.||.. .+..|.+. +.+| .++|+++++++. ...+....++.+++++ +.|+|++|+|+....+.
T Consensus 5 ~~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~-~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~H~~~ 83 (364)
T 3e82_A 5 NNTINIALIGYGFVGKTFHAPLIRSVPGLNLAFVASRDEEKVKR-DLPDVTVIASPEAAVQHPDVDLVVIASPNATHAPL 83 (364)
T ss_dssp --CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHHH-HCTTSEEESCHHHHHTCTTCSEEEECSCGGGHHHH
T ss_pred CCcceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHh-hCCCCcEECCHHHHhcCCCCCEEEEeCChHHHHHH
Confidence 35689999999999997 67777665 5676 488999988652 1235667789999987 78999999998866665
Q ss_pred HhcCCCccccCCCCCCCeEEEEcC--CCCHHHHHHHHHHHh
Q 018506 118 VYNGPNGLLQGGNSVRPQLLIDSS--TIDPQTSRNISAAVS 156 (355)
Q Consensus 118 vl~~~~~~l~~~~~~~~~ivi~~s--t~~~~~~~~l~~~~~ 156 (355)
+.. .++ .|+.|+... +....+.+++.+...
T Consensus 84 ~~~----al~-----aGk~Vl~EKPla~~~~e~~~l~~~a~ 115 (364)
T 3e82_A 84 ARL----ALN-----AGKHVVVDKPFTLDMQEARELIALAE 115 (364)
T ss_dssp HHH----HHH-----TTCEEEECSCSCSSHHHHHHHHHHHH
T ss_pred HHH----HHH-----CCCcEEEeCCCcCCHHHHHHHHHHHH
Confidence 543 233 223344333 456777777776654
No 202
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=98.26 E-value=3.5e-06 Score=79.40 Aligned_cols=70 Identities=19% Similarity=0.208 Sum_probs=57.8
Q ss_pred CCCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHh-CCCCC------CCCHHHHhhcCCEEEEeCCCc
Q 018506 43 CQFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSD-MGVPT------KETPFEVAEASDVVITMLPSS 112 (355)
Q Consensus 43 ~~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~-~g~~~------~~s~~e~~~~aDiVi~~v~~~ 112 (355)
....+|+|||+|.+|..+++.+...|.+|+++||++++.+.+.+ .|... ..++.+.++.+|+||.|++.+
T Consensus 166 l~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvVi~~~~~p 242 (377)
T 2vhw_A 166 VEPADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGAVLVP 242 (377)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEEEECCCCT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHcCCCEEEECCCcC
Confidence 34578999999999999999999999999999999999887766 45442 234567778999999998654
No 203
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=98.24 E-value=6.1e-06 Score=78.83 Aligned_cols=106 Identities=14% Similarity=0.173 Sum_probs=76.9
Q ss_pred CCCceEEEEcccH---HhHHHHHHHHHCC-CcEE--EEeCChhHHHHHHh-CCC---CCCCCHHHHhhc-------CCEE
Q 018506 43 CQFESVGFIGLGN---MGFRMASNLMKAG-YKMA--VHDVNCNVMKMFSD-MGV---PTKETPFEVAEA-------SDVV 105 (355)
Q Consensus 43 ~~~mkIgiIG~G~---mG~~ia~~L~~~G-~~V~--v~dr~~~~~~~l~~-~g~---~~~~s~~e~~~~-------aDiV 105 (355)
|+++||||||+|. ||...+..+...+ ++++ ++|+++++++.+.+ .|+ ...++.++++++ .|+|
T Consensus 35 m~~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~vD~V 114 (417)
T 3v5n_A 35 QKRIRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSSTPEKAEASGRELGLDPSRVYSDFKEMAIREAKLKNGIEAV 114 (417)
T ss_dssp CCCEEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECCSSHHHHHHHHHHHTCCGGGBCSCHHHHHHHHHHCTTCCSEE
T ss_pred CCcceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHcCCCcccccCCHHHHHhcccccCCCCcEE
Confidence 5668999999999 9999999888776 5654 67999999988766 466 477899999876 8999
Q ss_pred EEeCCCchHHHHHhcCCCccccCCCCCCCeEEEEcC-CCCHHHHHHHHHHHh
Q 018506 106 ITMLPSSSHVLDVYNGPNGLLQGGNSVRPQLLIDSS-TIDPQTSRNISAAVS 156 (355)
Q Consensus 106 i~~v~~~~~~~~vl~~~~~~l~~~~~~~~~ivi~~s-t~~~~~~~~l~~~~~ 156 (355)
++|+|+....+-+.. .++. +..++++.- +....+.+++.+...
T Consensus 115 ~I~tp~~~H~~~~~~----al~a----GkhVl~EKPla~~~~ea~~l~~~a~ 158 (417)
T 3v5n_A 115 AIVTPNHVHYAAAKE----FLKR----GIHVICDKPLTSTLADAKKLKKAAD 158 (417)
T ss_dssp EECSCTTSHHHHHHH----HHTT----TCEEEEESSSCSSHHHHHHHHHHHH
T ss_pred EECCCcHHHHHHHHH----HHhC----CCeEEEECCCcCCHHHHHHHHHHHH
Confidence 999998866655443 2322 223555532 455677777776654
No 204
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=98.24 E-value=5e-06 Score=78.94 Aligned_cols=108 Identities=13% Similarity=0.190 Sum_probs=78.3
Q ss_pred CCCCceEEEEcccH---HhHHHHHHHHHCC-CcEE--EEeCChhHHHHHHh-CCC---CCCCCHHHHhhc-------CCE
Q 018506 42 SCQFESVGFIGLGN---MGFRMASNLMKAG-YKMA--VHDVNCNVMKMFSD-MGV---PTKETPFEVAEA-------SDV 104 (355)
Q Consensus 42 ~~~~mkIgiIG~G~---mG~~ia~~L~~~G-~~V~--v~dr~~~~~~~l~~-~g~---~~~~s~~e~~~~-------aDi 104 (355)
.|+++||||||+|. ||...+..+...+ ++++ ++|+++++++.+.+ .|+ ...+|.++++++ .|+
T Consensus 9 ~m~~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~vD~ 88 (398)
T 3dty_A 9 IPQPIRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFDIDPIRGSAFGEQLGVDSERCYADYLSMFEQEARRADGIQA 88 (398)
T ss_dssp SCSCEEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECCSSHHHHHHHHHHTTCCGGGBCSSHHHHHHHHTTCTTCCSE
T ss_pred ccCcceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeCCCHHHHHHHHHHhCCCcceeeCCHHHHHhcccccCCCCCE
Confidence 35678999999999 9999999888765 5665 67999999988765 576 577899999865 899
Q ss_pred EEEeCCCchHHHHHhcCCCccccCCCCCCCeEEEEc-CCCCHHHHHHHHHHHhh
Q 018506 105 VITMLPSSSHVLDVYNGPNGLLQGGNSVRPQLLIDS-STIDPQTSRNISAAVSN 157 (355)
Q Consensus 105 Vi~~v~~~~~~~~vl~~~~~~l~~~~~~~~~ivi~~-st~~~~~~~~l~~~~~~ 157 (355)
|++|+|+....+.+.. .++. +..++++- -+....+.+++.+...+
T Consensus 89 V~i~tp~~~H~~~~~~----al~a----GkhVl~EKPla~~~~ea~~l~~~a~~ 134 (398)
T 3dty_A 89 VSIATPNGTHYSITKA----ALEA----GLHVVCEKPLCFTVEQAENLRELSHK 134 (398)
T ss_dssp EEEESCGGGHHHHHHH----HHHT----TCEEEECSCSCSCHHHHHHHHHHHHH
T ss_pred EEECCCcHHHHHHHHH----HHHC----CCeEEEeCCCcCCHHHHHHHHHHHHH
Confidence 9999998866655443 2322 11344432 24456677777766543
No 205
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=98.24 E-value=1.3e-06 Score=80.56 Aligned_cols=74 Identities=15% Similarity=0.169 Sum_probs=56.1
Q ss_pred CCCceEEEEcccHHhHHHHHHHHHC-CCc-EEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHHHHh
Q 018506 43 CQFESVGFIGLGNMGFRMASNLMKA-GYK-MAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVY 119 (355)
Q Consensus 43 ~~~mkIgiIG~G~mG~~ia~~L~~~-G~~-V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl 119 (355)
|+++||+|||+|+||..++..|.+. +.+ |.++|+++++ .+. .++...++.++++.++|+||+|+|.....+.+.
T Consensus 1 M~~irV~IiG~G~mG~~~~~~l~~~~~~elvav~d~~~~~--~~~-~gv~~~~d~~~ll~~~DvViiatp~~~h~~~~~ 76 (320)
T 1f06_A 1 MTNIRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATL--DTK-TPVFDVADVDKHADDVDVLFLCMGSATDIPEQA 76 (320)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCC--SSS-SCEEEGGGGGGTTTTCSEEEECSCTTTHHHHHH
T ss_pred CCCCEEEEEeecHHHHHHHHHHhcCCCCEEEEEEcCCHHH--hhc-CCCceeCCHHHHhcCCCEEEEcCCcHHHHHHHH
Confidence 3568999999999999999999886 456 4688998665 222 344455677777778999999998875655554
No 206
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=98.24 E-value=2.8e-06 Score=81.75 Aligned_cols=109 Identities=16% Similarity=0.143 Sum_probs=78.9
Q ss_pred CCceEEEEcc----cHHhHHHHHHHHHC--CCcE-EEEeCChhHHHHHHh-CCCC---CCCCHHHHhh--cCCEEEEeCC
Q 018506 44 QFESVGFIGL----GNMGFRMASNLMKA--GYKM-AVHDVNCNVMKMFSD-MGVP---TKETPFEVAE--ASDVVITMLP 110 (355)
Q Consensus 44 ~~mkIgiIG~----G~mG~~ia~~L~~~--G~~V-~v~dr~~~~~~~l~~-~g~~---~~~s~~e~~~--~aDiVi~~v~ 110 (355)
+++||||||+ |.||...+..|.+. +.+| .++|+++++++.+.+ .|+. ..++.+++++ +.|+|++|+|
T Consensus 19 ~~irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~ll~~~~vD~V~i~tp 98 (438)
T 3btv_A 19 APIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATIQRLKLSNATAFPTLESFASSSTIDMIVIAIQ 98 (438)
T ss_dssp CCEEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTCTTCEEESSHHHHHHCSSCSEEEECSC
T ss_pred CCCEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHcCCCcceeeCCHHHHhcCCCCCEEEEeCC
Confidence 4579999999 99999999999986 6675 688999999888776 4554 6789999986 5899999999
Q ss_pred CchHHHHHhcCCCccccCCC-CCC-CeEEEEc-CCCCHHHHHHHHHHHh
Q 018506 111 SSSHVLDVYNGPNGLLQGGN-SVR-PQLLIDS-STIDPQTSRNISAAVS 156 (355)
Q Consensus 111 ~~~~~~~vl~~~~~~l~~~~-~~~-~~ivi~~-st~~~~~~~~l~~~~~ 156 (355)
+....+.+... ++.+. .++ ..++++. .+....+.+++.+...
T Consensus 99 ~~~H~~~~~~a----l~aG~~~~~~khVl~EKP~a~~~~e~~~l~~~a~ 143 (438)
T 3btv_A 99 VASHYEVVMPL----LEFSKNNPNLKYLFVEWALACSLDQAESIYKAAA 143 (438)
T ss_dssp HHHHHHHHHHH----HHHGGGCTTCCEEEEESSCCSSHHHHHHHHHHHH
T ss_pred cHHHHHHHHHH----HHCCCCcccceeEEecCcccCCHHHHHHHHHHHH
Confidence 87666555432 22110 000 2467763 4556777777777654
No 207
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=98.23 E-value=7.3e-06 Score=76.74 Aligned_cols=106 Identities=15% Similarity=0.180 Sum_probs=75.3
Q ss_pred CCCceEEEEcccHHhH-HHHHHHHHCCCcE-EEEeCChhHHHHHHh-CC-CCCCCCHHHHhhc--CCEEEEeCCCchHHH
Q 018506 43 CQFESVGFIGLGNMGF-RMASNLMKAGYKM-AVHDVNCNVMKMFSD-MG-VPTKETPFEVAEA--SDVVITMLPSSSHVL 116 (355)
Q Consensus 43 ~~~mkIgiIG~G~mG~-~ia~~L~~~G~~V-~v~dr~~~~~~~l~~-~g-~~~~~s~~e~~~~--aDiVi~~v~~~~~~~ 116 (355)
|+++||||||+|.+|. .++..+...+.++ .++|+++++++.+.+ .+ ....++.++++++ .|+|++|+|+....+
T Consensus 24 m~~irvgiiG~G~~~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~vD~V~I~tp~~~H~~ 103 (361)
T 3u3x_A 24 MDELRFAAVGLNHNHIYGQVNCLLRAGARLAGFHEKDDALAAEFSAVYADARRIATAEEILEDENIGLIVSAAVSSERAE 103 (361)
T ss_dssp --CCEEEEECCCSTTHHHHHHHHHHTTCEEEEEECSCHHHHHHHHHHSSSCCEESCHHHHHTCTTCCEEEECCCHHHHHH
T ss_pred ccCcEEEEECcCHHHHHHHHHHhhcCCcEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCChHHHHH
Confidence 4568999999999995 5777777788884 588999999988876 44 5678899999875 899999999876655
Q ss_pred HHhcCCCccccCCCCCCCeEEEEc-CCCCHHHHHHHHHHHh
Q 018506 117 DVYNGPNGLLQGGNSVRPQLLIDS-STIDPQTSRNISAAVS 156 (355)
Q Consensus 117 ~vl~~~~~~l~~~~~~~~~ivi~~-st~~~~~~~~l~~~~~ 156 (355)
.+.. .++. +..++++- -+....+.+++.+...
T Consensus 104 ~~~~----al~a----GkhVl~EKPla~~~~ea~~l~~~a~ 136 (361)
T 3u3x_A 104 LAIR----AMQH----GKDVLVDKPGMTSFDQLAKLRRVQA 136 (361)
T ss_dssp HHHH----HHHT----TCEEEEESCSCSSHHHHHHHHHHHH
T ss_pred HHHH----HHHC----CCeEEEeCCCCCCHHHHHHHHHHHH
Confidence 5443 2332 12355543 2445667777766554
No 208
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=98.23 E-value=1.4e-06 Score=80.18 Aligned_cols=69 Identities=25% Similarity=0.303 Sum_probs=54.4
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCC--cEEEEeCChhHHHH----HHhC------CCCCCCCHHHHhhcCCEEEEeCCC
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGY--KMAVHDVNCNVMKM----FSDM------GVPTKETPFEVAEASDVVITMLPS 111 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~--~V~v~dr~~~~~~~----l~~~------g~~~~~s~~e~~~~aDiVi~~v~~ 111 (355)
..|||+|||+|.||.+++..|+..|+ +|.++|+++++++. +.+. +....++..+++++||+||++...
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~~~a~~~aDvVvi~ag~ 83 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGTYEDCKDADIVCICAGA 83 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEECGGGGTTCSEEEECCSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCcHHHhCCCCEEEEeccc
Confidence 45899999999999999999999987 89999999988765 4432 222234445788999999999754
Q ss_pred c
Q 018506 112 S 112 (355)
Q Consensus 112 ~ 112 (355)
+
T Consensus 84 p 84 (326)
T 3pqe_A 84 N 84 (326)
T ss_dssp C
T ss_pred C
Confidence 3
No 209
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=98.22 E-value=1.3e-06 Score=84.47 Aligned_cols=69 Identities=20% Similarity=0.299 Sum_probs=53.7
Q ss_pred CCceEEEEcccHH--hHHHHHHHHHC----CCcEEEEeCChhHHHHHHh--------C----CCCCCCCHHHHhhcCCEE
Q 018506 44 QFESVGFIGLGNM--GFRMASNLMKA----GYKMAVHDVNCNVMKMFSD--------M----GVPTKETPFEVAEASDVV 105 (355)
Q Consensus 44 ~~mkIgiIG~G~m--G~~ia~~L~~~----G~~V~v~dr~~~~~~~l~~--------~----g~~~~~s~~e~~~~aDiV 105 (355)
++|||+|||+|.| |.+++..|+.. |++|++||+++++++...+ . .+..+++..+++++||+|
T Consensus 2 ~~~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~l~~~~~~~~~~l~~~~~~~~I~~ttD~~eal~dAD~V 81 (480)
T 1obb_A 2 PSVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTMNLDDVIIDADFV 81 (480)
T ss_dssp CCCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCcEEEEECCHHHHhCCCCEE
Confidence 4689999999996 57778888754 8999999999988665322 1 133456777889999999
Q ss_pred EEeCCCc
Q 018506 106 ITMLPSS 112 (355)
Q Consensus 106 i~~v~~~ 112 (355)
|++++..
T Consensus 82 Iiaagv~ 88 (480)
T 1obb_A 82 INTAMVG 88 (480)
T ss_dssp EECCCTT
T ss_pred EECCCcc
Confidence 9999863
No 210
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=98.22 E-value=6.9e-06 Score=76.60 Aligned_cols=105 Identities=15% Similarity=0.275 Sum_probs=74.7
Q ss_pred CCceEEEEcccHHhHH-HHHHHHHC-CCcE-EEEeCChhHHHHHHhCCCCCCCCHHHHhhc--CCEEEEeCCCchHHHHH
Q 018506 44 QFESVGFIGLGNMGFR-MASNLMKA-GYKM-AVHDVNCNVMKMFSDMGVPTKETPFEVAEA--SDVVITMLPSSSHVLDV 118 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~-ia~~L~~~-G~~V-~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~--aDiVi~~v~~~~~~~~v 118 (355)
+++||||||+|.||.. .+..|.+. +.+| .++|+++++++. ...+....++.++++++ .|+|++|+|+....+.+
T Consensus 6 ~~~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~~~~~~~~-~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~ 84 (352)
T 3kux_A 6 DKIKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSSDASKVHA-DWPAIPVVSDPQMLFNDPSIDLIVIPTPNDTHFPLA 84 (352)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHHT-TCSSCCEESCHHHHHHCSSCCEEEECSCTTTHHHHH
T ss_pred CCceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECCCHHHHHh-hCCCCceECCHHHHhcCCCCCEEEEeCChHHHHHHH
Confidence 3579999999999997 77777765 5675 488999988762 11356778899999875 89999999988766655
Q ss_pred hcCCCccccCCCCCCCeEEEEcC-CCCHHHHHHHHHHHhh
Q 018506 119 YNGPNGLLQGGNSVRPQLLIDSS-TIDPQTSRNISAAVSN 157 (355)
Q Consensus 119 l~~~~~~l~~~~~~~~~ivi~~s-t~~~~~~~~l~~~~~~ 157 (355)
.. .++. +..++++.- +....+.+++.+...+
T Consensus 85 ~~----al~a----GkhV~~EKPla~~~~e~~~l~~~a~~ 116 (352)
T 3kux_A 85 QS----ALAA----GKHVVVDKPFTVTLSQANALKEHADD 116 (352)
T ss_dssp HH----HHHT----TCEEEECSSCCSCHHHHHHHHHHHHH
T ss_pred HH----HHHC----CCcEEEECCCcCCHHHHHHHHHHHHH
Confidence 43 2332 223666543 4567777777766543
No 211
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=98.21 E-value=1.1e-05 Score=76.93 Aligned_cols=70 Identities=17% Similarity=0.214 Sum_probs=54.9
Q ss_pred CCceEEEEcccHHhHHHHHHHHHC-CCc-EEEEeCChhHHHHHHhC--C----------------------CCCCCCHHH
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKA-GYK-MAVHDVNCNVMKMFSDM--G----------------------VPTKETPFE 97 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~-G~~-V~v~dr~~~~~~~l~~~--g----------------------~~~~~s~~e 97 (355)
+.+||||||+|.||..++..+.+. +.+ +.++|+++++++.+.+. | ...+++.++
T Consensus 22 k~IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D~~~era~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g~~~v~~D~ee 101 (446)
T 3upl_A 22 KPIRIGLIGAGEMGTDIVTQVARMQGIEVGALSARRLPNTFKAIRTAYGDEENAREATTESAMTRAIEAGKIAVTDDNDL 101 (446)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTSSSEEEEEEECSSTHHHHHHHHHHHSSSTTEEECSSHHHHHHHHHTTCEEEESCHHH
T ss_pred CceEEEEECChHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhcCCccccccccchhhhhhhhccCCceEECCHHH
Confidence 458999999999999999988764 445 56789999998776531 3 235678889
Q ss_pred Hhh--cCCEEEEeCCCch
Q 018506 98 VAE--ASDVVITMLPSSS 113 (355)
Q Consensus 98 ~~~--~aDiVi~~v~~~~ 113 (355)
+++ +.|+|++++|.+.
T Consensus 102 LL~d~dIDaVviaTp~p~ 119 (446)
T 3upl_A 102 ILSNPLIDVIIDATGIPE 119 (446)
T ss_dssp HHTCTTCCEEEECSCCHH
T ss_pred HhcCCCCCEEEEcCCChH
Confidence 886 4899999998763
No 212
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=98.21 E-value=1.9e-06 Score=80.15 Aligned_cols=104 Identities=13% Similarity=0.124 Sum_probs=71.2
Q ss_pred CceEEEEcccHHhHHHHHH-H-HH-CCCcEE-EEeCChhHHHHHHh-CCCCCCCCHHHHhhc--CCEEEEeCCCchHHHH
Q 018506 45 FESVGFIGLGNMGFRMASN-L-MK-AGYKMA-VHDVNCNVMKMFSD-MGVPTKETPFEVAEA--SDVVITMLPSSSHVLD 117 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~-L-~~-~G~~V~-v~dr~~~~~~~l~~-~g~~~~~s~~e~~~~--aDiVi~~v~~~~~~~~ 117 (355)
++||||||+|.||..+... + .. .+++|. ++|+++++.+...+ .++...+|.++++++ .|+|++|+|+....+.
T Consensus 2 ~~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~ 81 (345)
T 3f4l_A 2 VINCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQAPIYSHIHFTSDLDEVLNDPDVKLVVVCTHADSHFEY 81 (345)
T ss_dssp CEEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECSSCCGGGGSGGGTTCEEESCTHHHHTCTTEEEEEECSCGGGHHHH
T ss_pred ceEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcCCHhHHHHHHhcCCCceECCHHHHhcCCCCCEEEEcCChHHHHHH
Confidence 5799999999999964433 4 32 356765 88999887754444 356678899999876 8999999998866665
Q ss_pred HhcCCCccccCCCCCCCeEEEEcC--CCCHHHHHHHHHHHhh
Q 018506 118 VYNGPNGLLQGGNSVRPQLLIDSS--TIDPQTSRNISAAVSN 157 (355)
Q Consensus 118 vl~~~~~~l~~~~~~~~~ivi~~s--t~~~~~~~~l~~~~~~ 157 (355)
+.. .++ .|+.|+.-. +..+.+.+++.+...+
T Consensus 82 ~~~----al~-----aGk~Vl~EKP~a~~~~e~~~l~~~a~~ 114 (345)
T 3f4l_A 82 AKR----ALE-----AGKNVLVEKPFTPTLAQAKELFALAKS 114 (345)
T ss_dssp HHH----HHH-----TTCEEEECSSSCSSHHHHHHHHHHHHH
T ss_pred HHH----HHH-----cCCcEEEeCCCCCCHHHHHHHHHHHHH
Confidence 543 233 233444333 4567777777766543
No 213
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=98.21 E-value=6.1e-06 Score=76.62 Aligned_cols=110 Identities=15% Similarity=0.176 Sum_probs=77.0
Q ss_pred CCCCCCCceEEEEccc-HHhHHHHHHHHHC--CCcE-EEEeCChhHHHHHHh-CCC-CCCCCHHHHhh--cCCEEEEeCC
Q 018506 39 QVPSCQFESVGFIGLG-NMGFRMASNLMKA--GYKM-AVHDVNCNVMKMFSD-MGV-PTKETPFEVAE--ASDVVITMLP 110 (355)
Q Consensus 39 ~~~~~~~mkIgiIG~G-~mG~~ia~~L~~~--G~~V-~v~dr~~~~~~~l~~-~g~-~~~~s~~e~~~--~aDiVi~~v~ 110 (355)
-|++.+++||||||+| .+|...+..|.+. +.++ .++|+++++++.+.+ .+. ...+|.+++++ +.|+|++|+|
T Consensus 12 ~~~~~~~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp 91 (340)
T 1zh8_A 12 HMKPLRKIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFDSYEELLESGLVDAVDLTLP 91 (340)
T ss_dssp ----CCCEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEESCHHHHHHSSCCSEEEECCC
T ss_pred ccCCCCceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEEeCC
Confidence 4666778999999999 8999999999876 4564 688999999988766 354 56789999986 5899999999
Q ss_pred CchHHHHHhcCCCccccCCCCCCCeEEEEc-CCCCHHHHHHHHHHHh
Q 018506 111 SSSHVLDVYNGPNGLLQGGNSVRPQLLIDS-STIDPQTSRNISAAVS 156 (355)
Q Consensus 111 ~~~~~~~vl~~~~~~l~~~~~~~~~ivi~~-st~~~~~~~~l~~~~~ 156 (355)
+....+.+.. .++. +..++++. -+....+.+++.+...
T Consensus 92 ~~~H~~~~~~----al~a----GkhVl~EKPla~~~~ea~~l~~~a~ 130 (340)
T 1zh8_A 92 VELNLPFIEK----ALRK----GVHVICEKPISTDVETGKKVVELSE 130 (340)
T ss_dssp GGGHHHHHHH----HHHT----TCEEEEESSSSSSHHHHHHHHHHHH
T ss_pred chHHHHHHHH----HHHC----CCcEEEeCCCCCCHHHHHHHHHHHH
Confidence 8765554443 3332 11355553 2345666677766554
No 214
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=98.20 E-value=3.2e-06 Score=80.09 Aligned_cols=92 Identities=18% Similarity=0.170 Sum_probs=70.2
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHH-HHHhcCC
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHV-LDVYNGP 122 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~-~~vl~~~ 122 (355)
.-.+++|||.|.+|..+|+.+...|.+|+++++++.+.......|+.. .+++++++.+|+|+++..+...+ ++
T Consensus 246 ~GKTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~~~G~~v-v~LeElL~~ADIVv~atgt~~lI~~e----- 319 (464)
T 3n58_A 246 AGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQAAMDGFEV-VTLDDAASTADIVVTTTGNKDVITID----- 319 (464)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEE-CCHHHHGGGCSEEEECCSSSSSBCHH-----
T ss_pred cCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCcchhhHHHhcCcee-ccHHHHHhhCCEEEECCCCccccCHH-----
Confidence 447899999999999999999999999999999988765555566654 47899999999999987543221 12
Q ss_pred CccccCCCCCCCeEEEEcCCCCH
Q 018506 123 NGLLQGGNSVRPQLLIDSSTIDP 145 (355)
Q Consensus 123 ~~~l~~~~~~~~~ivi~~st~~~ 145 (355)
.+..+ .++.+++|++....
T Consensus 320 --~l~~M--K~GAILINvGRgdv 338 (464)
T 3n58_A 320 --HMRKM--KDMCIVGNIGHFDN 338 (464)
T ss_dssp --HHHHS--CTTEEEEECSSSTT
T ss_pred --HHhcC--CCCeEEEEcCCCCc
Confidence 22221 26689999988764
No 215
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=98.20 E-value=6.2e-06 Score=77.97 Aligned_cols=105 Identities=22% Similarity=0.280 Sum_probs=76.8
Q ss_pred CceEEEEccc-HHhHHHHHHHHHC-CCcE-EEEeCChhHHHHHHh-CCCCCCCCHHHHhhc--CCEEEEeCCCchHHHHH
Q 018506 45 FESVGFIGLG-NMGFRMASNLMKA-GYKM-AVHDVNCNVMKMFSD-MGVPTKETPFEVAEA--SDVVITMLPSSSHVLDV 118 (355)
Q Consensus 45 ~mkIgiIG~G-~mG~~ia~~L~~~-G~~V-~v~dr~~~~~~~l~~-~g~~~~~s~~e~~~~--aDiVi~~v~~~~~~~~v 118 (355)
++||||||+| .||..++..|.+. +.++ .++|+++++++.+.+ .|+...+|.++++++ .|+|++++|+....+.+
T Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~ell~~~~vD~V~i~tp~~~H~~~~ 81 (387)
T 3moi_A 2 KIRFGICGLGFAGSVLMAPAMRHHPDAQIVAACDPNEDVRERFGKEYGIPVFATLAEMMQHVQMDAVYIASPHQFHCEHV 81 (387)
T ss_dssp CEEEEEECCSHHHHTTHHHHHHHCTTEEEEEEECSCHHHHHHHHHHHTCCEESSHHHHHHHSCCSEEEECSCGGGHHHHH
T ss_pred ceEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHcCCCeECCHHHHHcCCCCCEEEEcCCcHHHHHHH
Confidence 5799999999 9999999999876 4564 588999999887765 478888999999874 99999999987665554
Q ss_pred hcCCCccccCCCCCCCeEEEEc-CCCCHHHHHHHHHHHhh
Q 018506 119 YNGPNGLLQGGNSVRPQLLIDS-STIDPQTSRNISAAVSN 157 (355)
Q Consensus 119 l~~~~~~l~~~~~~~~~ivi~~-st~~~~~~~~l~~~~~~ 157 (355)
.. .++. ...++++. .+....+.+++.+...+
T Consensus 82 ~~----al~a----Gk~Vl~EKP~a~~~~e~~~l~~~a~~ 113 (387)
T 3moi_A 82 VQ----ASEQ----GLHIIVEKPLTLSRDEADRMIEAVER 113 (387)
T ss_dssp HH----HHHT----TCEEEECSCCCSCHHHHHHHHHHHHH
T ss_pred HH----HHHC----CCceeeeCCccCCHHHHHHHHHHHHH
Confidence 43 2322 11355443 24456777777666543
No 216
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=98.19 E-value=3.6e-06 Score=79.54 Aligned_cols=93 Identities=17% Similarity=0.115 Sum_probs=69.8
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHH-HHhcCC
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVL-DVYNGP 122 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~-~vl~~~ 122 (355)
.-.+|+|+|+|.+|..+|+.|...|.+|+++|+++.+.......|.. ..+++++++.+|+|++|..+...+. +
T Consensus 219 ~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~~G~~-v~~Leeal~~ADIVi~atgt~~lI~~e----- 292 (435)
T 3gvp_A 219 GGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICALQACMDGFR-LVKLNEVIRQVDIVITCTGNKNVVTRE----- 292 (435)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCE-ECCHHHHTTTCSEEEECSSCSCSBCHH-----
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCChhhhHHHHHcCCE-eccHHHHHhcCCEEEECCCCcccCCHH-----
Confidence 44789999999999999999999999999999999876655556654 3579999999999999743222221 2
Q ss_pred CccccCCCCCCCeEEEEcCCCCHH
Q 018506 123 NGLLQGGNSVRPQLLIDSSTIDPQ 146 (355)
Q Consensus 123 ~~~l~~~~~~~~~ivi~~st~~~~ 146 (355)
.+... .++.+++|++...++
T Consensus 293 --~l~~M--K~gailINvgrg~~E 312 (435)
T 3gvp_A 293 --HLDRM--KNSCIVCNMGHSNTE 312 (435)
T ss_dssp --HHHHS--CTTEEEEECSSTTTT
T ss_pred --HHHhc--CCCcEEEEecCCCcc
Confidence 22221 256799999887654
No 217
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=98.19 E-value=1.3e-06 Score=83.79 Aligned_cols=68 Identities=19% Similarity=0.234 Sum_probs=55.4
Q ss_pred CCCceEEEEcccHH--hHHHHHHHHH----CCCcEEEEeCChhHHHHHHhC---------CCCCCCCHHHHhhcCCEEEE
Q 018506 43 CQFESVGFIGLGNM--GFRMASNLMK----AGYKMAVHDVNCNVMKMFSDM---------GVPTKETPFEVAEASDVVIT 107 (355)
Q Consensus 43 ~~~mkIgiIG~G~m--G~~ia~~L~~----~G~~V~v~dr~~~~~~~l~~~---------g~~~~~s~~e~~~~aDiVi~ 107 (355)
|+.|||+|||+|.| |..++..|+. .| +|++||+++++++..... .+..+++.++++++||+||+
T Consensus 3 m~~~KIaVIGaGs~g~g~~la~~l~~~~~~~g-eV~L~Di~~e~le~~~~~~~~l~~~~~~I~~TtD~~eAl~dADfVI~ 81 (450)
T 3fef_A 3 LDQIKIAYIGGGSQGWARSLMSDLSIDERMSG-TVALYDLDFEAAQKNEVIGNHSGNGRWRYEAVSTLKKALSAADIVII 81 (450)
T ss_dssp CCCEEEEEETTTCSSHHHHHHHHHHHCSSCCE-EEEEECSSHHHHHHHHHHHTTSTTSCEEEEEESSHHHHHTTCSEEEE
T ss_pred CCCCEEEEECCChhHhHHHHHHHHHhccccCC-eEEEEeCCHHHHHHHHHHHHHHhccCCeEEEECCHHHHhcCCCEEEe
Confidence 45689999999996 6899999986 56 999999999887654431 24456789999999999999
Q ss_pred eCCC
Q 018506 108 MLPS 111 (355)
Q Consensus 108 ~v~~ 111 (355)
+++-
T Consensus 82 airv 85 (450)
T 3fef_A 82 SILP 85 (450)
T ss_dssp CCCS
T ss_pred cccc
Confidence 9974
No 218
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=98.14 E-value=2.8e-06 Score=79.74 Aligned_cols=70 Identities=24% Similarity=0.360 Sum_probs=54.2
Q ss_pred CCCCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCC----CCC--CCCHHHHhhcCCEEEEeCCCc
Q 018506 42 SCQFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMG----VPT--KETPFEVAEASDVVITMLPSS 112 (355)
Q Consensus 42 ~~~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g----~~~--~~s~~e~~~~aDiVi~~v~~~ 112 (355)
..+.|||.|||+|.+|+.++..|++ .++|.++|++.++++.+.+.. +.+ ..++.++++++|+||.|+|..
T Consensus 13 ~g~~mkilvlGaG~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p~~ 88 (365)
T 3abi_A 13 EGRHMKVLILGAGNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPGF 88 (365)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSEEEECCCGG
T ss_pred cCCccEEEEECCCHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhccCCcEEEecCCHHHHHHHHhCCCEEEEecCCc
Confidence 3456899999999999999999976 489999999999988876532 222 223456778999999999865
No 219
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=98.13 E-value=5.5e-06 Score=77.11 Aligned_cols=106 Identities=16% Similarity=0.208 Sum_probs=72.7
Q ss_pred CCCceEEEEcccHHhHH-HHHHHHHC-CCcE-EEEeCChhHHHHHHh-CCCC-CCCCHHHHhh--cCCEEEEeCCCchHH
Q 018506 43 CQFESVGFIGLGNMGFR-MASNLMKA-GYKM-AVHDVNCNVMKMFSD-MGVP-TKETPFEVAE--ASDVVITMLPSSSHV 115 (355)
Q Consensus 43 ~~~mkIgiIG~G~mG~~-ia~~L~~~-G~~V-~v~dr~~~~~~~l~~-~g~~-~~~s~~e~~~--~aDiVi~~v~~~~~~ 115 (355)
++|+||||||+|.||.. ++..+.+. +.+| .++|+++++++++.+ .|+. ..+|.+++++ +.|+|++|+|+....
T Consensus 21 ~~mirigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~I~tP~~~H~ 100 (350)
T 4had_A 21 QSMLRFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMADRFSVPHAFGSYEEMLASDVIDAVYIPLPTSQHI 100 (350)
T ss_dssp -CCEEEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHHCSSCSEEEECSCGGGHH
T ss_pred cCccEEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCeeeCCHHHHhcCCCCCEEEEeCCCchhH
Confidence 46789999999999975 56777765 4565 478999999998876 4653 6789999985 479999999988766
Q ss_pred HHHhcCCCccccCCCCCCCeEEEEc-CCCCHHHHHHHHHHHh
Q 018506 116 LDVYNGPNGLLQGGNSVRPQLLIDS-STIDPQTSRNISAAVS 156 (355)
Q Consensus 116 ~~vl~~~~~~l~~~~~~~~~ivi~~-st~~~~~~~~l~~~~~ 156 (355)
+-++.. ++. +..+++.- -+....+.+++.+...
T Consensus 101 ~~~~~a----l~a----GkhVl~EKPla~~~~ea~~l~~~a~ 134 (350)
T 4had_A 101 EWSIKA----ADA----GKHVVCEKPLALKAGDIDAVIAARD 134 (350)
T ss_dssp HHHHHH----HHT----TCEEEECSCCCSSGGGGHHHHHHHH
T ss_pred HHHHHH----Hhc----CCEEEEeCCcccchhhHHHHHHHHH
Confidence 555432 221 11244432 1234556666666554
No 220
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=98.11 E-value=1.6e-06 Score=69.94 Aligned_cols=71 Identities=18% Similarity=0.334 Sum_probs=57.9
Q ss_pred ceEEEEcc----cHHhHHHHHHHHHCCCcEEEEeCChhHH-HHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHHHHhc
Q 018506 46 ESVGFIGL----GNMGFRMASNLMKAGYKMAVHDVNCNVM-KMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYN 120 (355)
Q Consensus 46 mkIgiIG~----G~mG~~ia~~L~~~G~~V~v~dr~~~~~-~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl~ 120 (355)
.+|+|||+ |.+|..++++|.+.||+ +|++||.+. +++ .|.....|+.|+.+..|++++++|. ..+.++++
T Consensus 14 ~~vaVvGas~~~g~~G~~~~~~l~~~G~~--v~~vnp~~~~~~i--~G~~~~~sl~el~~~vDlavi~vp~-~~~~~v~~ 88 (140)
T 1iuk_A 14 KTIAVLGAHKDPSRPAHYVPRYLREQGYR--VLPVNPRFQGEEL--FGEEAVASLLDLKEPVDILDVFRPP-SALMDHLP 88 (140)
T ss_dssp CEEEEETCCSSTTSHHHHHHHHHHHTTCE--EEEECGGGTTSEE--TTEECBSSGGGCCSCCSEEEECSCH-HHHTTTHH
T ss_pred CEEEEECCCCCCCChHHHHHHHHHHCCCE--EEEeCCCcccCcC--CCEEecCCHHHCCCCCCEEEEEeCH-HHHHHHHH
Confidence 57999999 89999999999999997 777777752 222 4677888999988889999999997 57667665
Q ss_pred C
Q 018506 121 G 121 (355)
Q Consensus 121 ~ 121 (355)
+
T Consensus 89 ~ 89 (140)
T 1iuk_A 89 E 89 (140)
T ss_dssp H
T ss_pred H
Confidence 4
No 221
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=98.11 E-value=3.2e-06 Score=77.43 Aligned_cols=67 Identities=19% Similarity=0.284 Sum_probs=52.3
Q ss_pred ceEEEEcccHHhHHHHHHHHHCCC--cEEEEeCChhHHH----HHHh------CCCCCC-CCHHHHhhcCCEEEEeCCCc
Q 018506 46 ESVGFIGLGNMGFRMASNLMKAGY--KMAVHDVNCNVMK----MFSD------MGVPTK-ETPFEVAEASDVVITMLPSS 112 (355)
Q Consensus 46 mkIgiIG~G~mG~~ia~~L~~~G~--~V~v~dr~~~~~~----~l~~------~g~~~~-~s~~e~~~~aDiVi~~v~~~ 112 (355)
|||+|||+|.||.+++..|+..|+ +|.++|+++++++ .+.+ ...... ++..+++++||+||++...+
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~~~~a~~~aDvVii~ag~~ 80 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTNDYGPTEDSDVCIITAGLP 80 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEESSSGGGTTCSEEEECCCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECCCHHHhCCCCEEEECCCCC
Confidence 799999999999999999999887 8999999998764 2222 122232 35678889999999997554
No 222
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=98.09 E-value=9.2e-06 Score=74.89 Aligned_cols=70 Identities=17% Similarity=0.206 Sum_probs=54.0
Q ss_pred CCCceEEEEcccHHhHHHHHHHHHCCC--cEEEEeCChhHHHHH----HhC-----CCCCCCCHHHHhhcCCEEEEeCCC
Q 018506 43 CQFESVGFIGLGNMGFRMASNLMKAGY--KMAVHDVNCNVMKMF----SDM-----GVPTKETPFEVAEASDVVITMLPS 111 (355)
Q Consensus 43 ~~~mkIgiIG~G~mG~~ia~~L~~~G~--~V~v~dr~~~~~~~l----~~~-----g~~~~~s~~e~~~~aDiVi~~v~~ 111 (355)
.+.|||+|||+|.+|.+++..|+..++ ++.++|+++++++.. .+. ...+..+..+++++||+||++.+.
T Consensus 7 ~~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~aDvVii~ag~ 86 (326)
T 2zqz_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYSAEYSDAKDADLVVITAGA 86 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGGGCSEEEECCCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEECCHHHhCCCCEEEEcCCC
Confidence 345899999999999999999998876 899999998877542 221 122333557788999999999865
Q ss_pred c
Q 018506 112 S 112 (355)
Q Consensus 112 ~ 112 (355)
+
T Consensus 87 ~ 87 (326)
T 2zqz_A 87 P 87 (326)
T ss_dssp C
T ss_pred C
Confidence 4
No 223
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=98.08 E-value=8.6e-06 Score=75.45 Aligned_cols=70 Identities=11% Similarity=0.072 Sum_probs=55.3
Q ss_pred CCCCceEEEEcc-cHHhHHHHHHHHHCC--CcEEEEeCChhHHHH----HHhC-----CCCCCCCHHHHhhcCCEEEEeC
Q 018506 42 SCQFESVGFIGL-GNMGFRMASNLMKAG--YKMAVHDVNCNVMKM----FSDM-----GVPTKETPFEVAEASDVVITML 109 (355)
Q Consensus 42 ~~~~mkIgiIG~-G~mG~~ia~~L~~~G--~~V~v~dr~~~~~~~----l~~~-----g~~~~~s~~e~~~~aDiVi~~v 109 (355)
.+.++||+|||+ |.+|.++|..++..| ++|.++|+++++++. +.+. .+..+++..+++++||+||++.
T Consensus 5 ~~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~t~d~~~al~dADvVvita 84 (343)
T 3fi9_A 5 YLTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTFTSDIKEALTDAKYIVSSG 84 (343)
T ss_dssp CSCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEEESCHHHHHTTEEEEEECC
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEEcCCHHHHhCCCCEEEEcc
Confidence 356789999998 999999999999988 589999999887654 4331 2233467888899999999997
Q ss_pred CC
Q 018506 110 PS 111 (355)
Q Consensus 110 ~~ 111 (355)
..
T Consensus 85 G~ 86 (343)
T 3fi9_A 85 GA 86 (343)
T ss_dssp C-
T ss_pred CC
Confidence 43
No 224
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=98.08 E-value=7e-06 Score=76.61 Aligned_cols=67 Identities=22% Similarity=0.261 Sum_probs=54.4
Q ss_pred CCCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhC-CCCCCCCHHHHhh-cCCEEEEeCC
Q 018506 43 CQFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDM-GVPTKETPFEVAE-ASDVVITMLP 110 (355)
Q Consensus 43 ~~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~-g~~~~~s~~e~~~-~aDiVi~~v~ 110 (355)
..-++|+|+|+|+||..+|+.|.+.|++|+++|+++++++++.+. ++... +..++.. +||+++.|..
T Consensus 171 L~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~ga~~v-~~~~ll~~~~DIvip~a~ 239 (364)
T 1leh_A 171 LEGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADAV-APNAIYGVTCDIFAPCAL 239 (364)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEEC-CGGGTTTCCCSEEEECSC
T ss_pred CCcCEEEEECchHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEE-ChHHHhccCCcEeeccch
Confidence 355789999999999999999999999999999999998877663 55444 4445444 8999998864
No 225
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=98.07 E-value=1.4e-05 Score=74.74 Aligned_cols=105 Identities=17% Similarity=0.198 Sum_probs=72.8
Q ss_pred CCCceEEEEcccHHhHH-HHHHHHHC-CCcE-EEEeCChhHHHHHHhCCCCCCCCHHHHhh--cCCEEEEeCCCchHHHH
Q 018506 43 CQFESVGFIGLGNMGFR-MASNLMKA-GYKM-AVHDVNCNVMKMFSDMGVPTKETPFEVAE--ASDVVITMLPSSSHVLD 117 (355)
Q Consensus 43 ~~~mkIgiIG~G~mG~~-ia~~L~~~-G~~V-~v~dr~~~~~~~l~~~g~~~~~s~~e~~~--~aDiVi~~v~~~~~~~~ 117 (355)
|+++||||||+|.||.. .+..|.+. +++| .++|++++++.... .+....++.+++++ +.|+|++|+|+....+.
T Consensus 3 m~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~~-~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~ 81 (358)
T 3gdo_A 3 LDTIKVGILGYGLSGSVFHGPLLDVLDEYQISKIMTSRTEEVKRDF-PDAEVVHELEEITNDPAIELVIVTTPSGLHYEH 81 (358)
T ss_dssp TTCEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECSCHHHHHHHC-TTSEEESSTHHHHTCTTCCEEEECSCTTTHHHH
T ss_pred CCcceEEEEccCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHhhC-CCCceECCHHHHhcCCCCCEEEEcCCcHHHHHH
Confidence 35689999999999997 67777665 5675 58899987743211 25667789999987 68999999999876665
Q ss_pred HhcCCCccccCCCCCCCeEEEEcC-CCCHHHHHHHHHHHh
Q 018506 118 VYNGPNGLLQGGNSVRPQLLIDSS-TIDPQTSRNISAAVS 156 (355)
Q Consensus 118 vl~~~~~~l~~~~~~~~~ivi~~s-t~~~~~~~~l~~~~~ 156 (355)
+.. .++. +..++++.- +....+.+++.+...
T Consensus 82 ~~~----al~a----GkhVl~EKPla~~~~e~~~l~~~a~ 113 (358)
T 3gdo_A 82 TMA----CIQA----GKHVVMEKPMTATAEEGETLKRAAD 113 (358)
T ss_dssp HHH----HHHT----TCEEEEESSCCSSHHHHHHHHHHHH
T ss_pred HHH----HHHc----CCeEEEecCCcCCHHHHHHHHHHHH
Confidence 543 3332 123555532 455677777766654
No 226
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=98.07 E-value=9.1e-06 Score=77.12 Aligned_cols=65 Identities=22% Similarity=0.201 Sum_probs=54.9
Q ss_pred CceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCC---------------------------CHHH
Q 018506 45 FESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKE---------------------------TPFE 97 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~---------------------------s~~e 97 (355)
-.+|+|||+|.+|...++.+...|.+|+++|+++++.+.+.+.|..... ++.+
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~e 251 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELFAA 251 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999998887777754332 2557
Q ss_pred HhhcCCEEEEeC
Q 018506 98 VAEASDVVITML 109 (355)
Q Consensus 98 ~~~~aDiVi~~v 109 (355)
.+..+|+||.++
T Consensus 252 ~~~~aDvVI~~~ 263 (401)
T 1x13_A 252 QAKEVDIIVTTA 263 (401)
T ss_dssp HHHHCSEEEECC
T ss_pred HhCCCCEEEECC
Confidence 778899999993
No 227
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=98.07 E-value=4.5e-06 Score=80.19 Aligned_cols=68 Identities=15% Similarity=0.161 Sum_probs=53.4
Q ss_pred CceEEEEcccHH-hHHHHHHHHHC-----CCcEEEEeCCh--hHHHHHH--------hCC----CCCCCCHHHHhhcCCE
Q 018506 45 FESVGFIGLGNM-GFRMASNLMKA-----GYKMAVHDVNC--NVMKMFS--------DMG----VPTKETPFEVAEASDV 104 (355)
Q Consensus 45 ~mkIgiIG~G~m-G~~ia~~L~~~-----G~~V~v~dr~~--~~~~~l~--------~~g----~~~~~s~~e~~~~aDi 104 (355)
.|||+|||+|.+ |.+++..|+++ +++|.+||+++ ++++... ..+ +..+++..+++++||+
T Consensus 7 ~~KIaVIGaGsv~~~al~~~L~~~~~~l~~~ev~L~Di~~~~e~~~~~~~~~~~~~~~~~~~~~i~~t~D~~eal~gAD~ 86 (450)
T 1s6y_A 7 RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLDRRRALDGADF 86 (450)
T ss_dssp CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCCCCCCEEEEEEcCCChHHHHHHHHHHHHHHhhcCCCcEEEEeCCHHHHhCCCCE
Confidence 479999999999 88888888884 67899999999 7765422 111 2234677889999999
Q ss_pred EEEeCCCc
Q 018506 105 VITMLPSS 112 (355)
Q Consensus 105 Vi~~v~~~ 112 (355)
||++++.+
T Consensus 87 VVitagv~ 94 (450)
T 1s6y_A 87 VTTQFRVG 94 (450)
T ss_dssp EEECCCTT
T ss_pred EEEcCCCC
Confidence 99999864
No 228
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=98.06 E-value=1.8e-06 Score=77.87 Aligned_cols=95 Identities=11% Similarity=0.052 Sum_probs=66.1
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCC-cEEEEeCChhHHHHHHhC-C---CCCCCCHHHHhhcCCEEEEeCCCchHHHHH
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGY-KMAVHDVNCNVMKMFSDM-G---VPTKETPFEVAEASDVVITMLPSSSHVLDV 118 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~-~V~v~dr~~~~~~~l~~~-g---~~~~~s~~e~~~~aDiVi~~v~~~~~~~~v 118 (355)
..+++.|+|+|.+|.+++..|.+.|. +|++++|++++++++.+. + .....+.+++..++|+||.++|.....+..
T Consensus 125 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~l~~~aDiIInaTp~gm~~~~~ 204 (281)
T 3o8q_A 125 KGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQLKQSYDVIINSTSASLDGELP 204 (281)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCCSCEEEEEECSCCCC----C
T ss_pred cCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHHHhcCCCCEEEEcCcCCCCCCCC
Confidence 45789999999999999999999996 899999999998887652 1 011224445547899999999876432211
Q ss_pred hcCCCccccCCCCCCCeEEEEcCCCC
Q 018506 119 YNGPNGLLQGGNSVRPQLLIDSSTID 144 (355)
Q Consensus 119 l~~~~~~l~~~~~~~~~ivi~~st~~ 144 (355)
... ...+. ++.+++|+...+
T Consensus 205 ~l~-~~~l~-----~~~~V~DlvY~P 224 (281)
T 3o8q_A 205 AID-PVIFS-----SRSVCYDMMYGK 224 (281)
T ss_dssp SCC-GGGEE-----EEEEEEESCCCS
T ss_pred CCC-HHHhC-----cCCEEEEecCCC
Confidence 101 11222 457899998874
No 229
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=98.06 E-value=1.2e-05 Score=75.46 Aligned_cols=70 Identities=20% Similarity=0.278 Sum_probs=56.2
Q ss_pred CCCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHh-CCCCC------CCCHHHHhhcCCEEEEeCCCc
Q 018506 43 CQFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSD-MGVPT------KETPFEVAEASDVVITMLPSS 112 (355)
Q Consensus 43 ~~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~-~g~~~------~~s~~e~~~~aDiVi~~v~~~ 112 (355)
...++|+|+|+|.+|..+++.+...|++|+++||++++.+.+.+ .+... ..+..++++.+|+||.+++.+
T Consensus 164 l~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~DvVi~~~g~~ 240 (369)
T 2eez_A 164 VAPASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQHADLLIGAVLVP 240 (369)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHHHCSEEEECCC--
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHHhCCCEEEECCCCC
Confidence 34488999999999999999999999999999999998877765 44431 234556778999999999754
No 230
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=98.06 E-value=8.4e-06 Score=74.72 Aligned_cols=69 Identities=20% Similarity=0.206 Sum_probs=50.9
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCC-cEEEEeCC--hhHHHH----HHh------CCCCCC-CCHHHHhhcCCEEEEeC
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGY-KMAVHDVN--CNVMKM----FSD------MGVPTK-ETPFEVAEASDVVITML 109 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~-~V~v~dr~--~~~~~~----l~~------~g~~~~-~s~~e~~~~aDiVi~~v 109 (355)
+.+||+|||+|.||.+++..|+..|+ +|++||++ +++++. +.+ ...... ++..+++++||+||++.
T Consensus 7 ~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~d~~a~~~aDvVIiaa 86 (315)
T 3tl2_A 7 KRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTSDYADTADSDVVVITA 86 (315)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEESCGGGGTTCSEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcCCHHHhCCCCEEEEeC
Confidence 45799999999999999999999999 99999998 444332 111 122222 23357788999999997
Q ss_pred CCc
Q 018506 110 PSS 112 (355)
Q Consensus 110 ~~~ 112 (355)
..+
T Consensus 87 g~p 89 (315)
T 3tl2_A 87 GIA 89 (315)
T ss_dssp SCC
T ss_pred CCC
Confidence 443
No 231
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=98.05 E-value=1.3e-05 Score=65.39 Aligned_cols=70 Identities=7% Similarity=0.070 Sum_probs=51.3
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCC-hhHHHHHHh---CCCCC----CCC---HHHH-hhcCCEEEEeCCC
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVN-CNVMKMFSD---MGVPT----KET---PFEV-AEASDVVITMLPS 111 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~-~~~~~~l~~---~g~~~----~~s---~~e~-~~~aDiVi~~v~~ 111 (355)
..++|.|+|+|.+|..+++.|.+.|++|++++++ +++.+.+.+ .+... .++ +.++ ++.+|.||+++++
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~ 81 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDN 81 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSSC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEecCC
Confidence 3468999999999999999999999999999998 465544432 23221 112 2333 5789999999987
Q ss_pred ch
Q 018506 112 SS 113 (355)
Q Consensus 112 ~~ 113 (355)
+.
T Consensus 82 d~ 83 (153)
T 1id1_A 82 DA 83 (153)
T ss_dssp HH
T ss_pred hH
Confidence 63
No 232
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=98.04 E-value=1.3e-05 Score=75.12 Aligned_cols=104 Identities=13% Similarity=0.187 Sum_probs=72.9
Q ss_pred CCCceEEEEcccHHhHH-HHHHHHHC-CCcE-EEEeCChhHHHHHHhC-CCCCCCCHHHHhhc--CCEEEEeCCCchHHH
Q 018506 43 CQFESVGFIGLGNMGFR-MASNLMKA-GYKM-AVHDVNCNVMKMFSDM-GVPTKETPFEVAEA--SDVVITMLPSSSHVL 116 (355)
Q Consensus 43 ~~~mkIgiIG~G~mG~~-ia~~L~~~-G~~V-~v~dr~~~~~~~l~~~-g~~~~~s~~e~~~~--aDiVi~~v~~~~~~~ 116 (355)
++++||||||+|.||.. .+..|.+. +.+| .++|++++++. .+. +....++.++++++ .|+|++|+|+....+
T Consensus 3 ~~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~--~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~ 80 (362)
T 3fhl_A 3 LEIIKTGLAAFGMSGQVFHAPFISTNPHFELYKIVERSKELSK--ERYPQASIVRSFKELTEDPEIDLIVVNTPDNTHYE 80 (362)
T ss_dssp CCCEEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECSSCCGGG--TTCTTSEEESCSHHHHTCTTCCEEEECSCGGGHHH
T ss_pred CCceEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHH--HhCCCCceECCHHHHhcCCCCCEEEEeCChHHHHH
Confidence 45689999999999997 67777765 5675 58899988732 222 55677899999876 899999999886665
Q ss_pred HHhcCCCccccCCCCCCCeEEEEcC-CCCHHHHHHHHHHHh
Q 018506 117 DVYNGPNGLLQGGNSVRPQLLIDSS-TIDPQTSRNISAAVS 156 (355)
Q Consensus 117 ~vl~~~~~~l~~~~~~~~~ivi~~s-t~~~~~~~~l~~~~~ 156 (355)
.+.. .++. +..++++.- +....+.+++.+...
T Consensus 81 ~~~~----al~a----GkhVl~EKP~a~~~~ea~~l~~~a~ 113 (362)
T 3fhl_A 81 YAGM----ALEA----GKNVVVEKPFTSTTKQGEELIALAK 113 (362)
T ss_dssp HHHH----HHHT----TCEEEEESSCCSSHHHHHHHHHHHH
T ss_pred HHHH----HHHC----CCeEEEecCCCCCHHHHHHHHHHHH
Confidence 5543 2332 224565543 456777777766654
No 233
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=98.01 E-value=3.8e-06 Score=75.09 Aligned_cols=92 Identities=18% Similarity=0.201 Sum_probs=64.5
Q ss_pred CceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHHHHhcCCCc
Q 018506 45 FESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNGPNG 124 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl~~~~~ 124 (355)
..++.|||+|.+|.+++..|.+.|.+|+++||++++++.+.+.++... +.+++ .++|+||.++|....-+..+. ...
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ka~~la~~~~~~~-~~~~l-~~~DiVInaTp~Gm~~~~~l~-~~~ 194 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSSRGLDFFQRLGCDCF-MEPPK-SAFDLIINATSASLHNELPLN-KEV 194 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTHHHHHHHTCEEE-SSCCS-SCCSEEEECCTTCCCCSCSSC-HHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEe-cHHHh-ccCCEEEEcccCCCCCCCCCC-hHH
Confidence 478999999999999999999999999999999999988875443322 22333 389999999986421110000 000
Q ss_pred ---cccCCCCCCCeEEEEcCCCC
Q 018506 125 ---LLQGGNSVRPQLLIDSSTID 144 (355)
Q Consensus 125 ---~l~~~~~~~~~ivi~~st~~ 144 (355)
.+. ++.+++|+...+
T Consensus 195 l~~~l~-----~~~~v~D~vY~P 212 (269)
T 3phh_A 195 LKGYFK-----EGKLAYDLAYGF 212 (269)
T ss_dssp HHHHHH-----HCSEEEESCCSS
T ss_pred HHhhCC-----CCCEEEEeCCCC
Confidence 121 346899998875
No 234
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=98.01 E-value=7.5e-06 Score=77.86 Aligned_cols=70 Identities=20% Similarity=0.278 Sum_probs=57.2
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCC-cEEEEeCChhHHHHHHh-CCCCC--CCCHHHHhhcCCEEEEeCCCch
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGY-KMAVHDVNCNVMKMFSD-MGVPT--KETPFEVAEASDVVITMLPSSS 113 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~-~V~v~dr~~~~~~~l~~-~g~~~--~~s~~e~~~~aDiVi~~v~~~~ 113 (355)
...+|+|||+|.||..++..|...|. +|+++||++++++.+.+ .|+.. ..++.+.+..+|+||.|++.+.
T Consensus 166 ~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~~~~~~~l~~~l~~aDvVi~at~~~~ 239 (404)
T 1gpj_A 166 HDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAVRFDELVDHLARSDVVVSATAAPH 239 (404)
T ss_dssp TTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEECCGGGHHHHHHTCSEEEECCSSSS
T ss_pred cCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCceecHHhHHHHhcCCCEEEEccCCCC
Confidence 44789999999999999999999998 89999999998865543 35432 2467778889999999998653
No 235
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=98.01 E-value=7.5e-06 Score=76.85 Aligned_cols=104 Identities=13% Similarity=0.263 Sum_probs=71.4
Q ss_pred CCceEEEEcccHHhHHHHHHHHHC--CCcE-EEEeCChhHHHHHHh-CCCCCCCCHHHHhhcCCEEEEeCCCchH----H
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKA--GYKM-AVHDVNCNVMKMFSD-MGVPTKETPFEVAEASDVVITMLPSSSH----V 115 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~--G~~V-~v~dr~~~~~~~l~~-~g~~~~~s~~e~~~~aDiVi~~v~~~~~----~ 115 (355)
...||+|||+| +|...+..+.+. ++++ .++||++++.+++.+ .|+...+|.++++++.|++++++|+... .
T Consensus 6 ~~~rv~VvG~G-~g~~h~~a~~~~~~~~elvav~~~~~~~a~~~a~~~gv~~~~~~~~l~~~~D~v~i~~p~~~h~~~~~ 84 (372)
T 4gmf_A 6 PKQRVLIVGAK-FGEMYLNAFMQPPEGLELVGLLAQGSARSRELAHAFGIPLYTSPEQITGMPDIACIVVRSTVAGGAGT 84 (372)
T ss_dssp -CEEEEEECST-TTHHHHHTTSSCCTTEEEEEEECCSSHHHHHHHHHTTCCEESSGGGCCSCCSEEEECCC--CTTSHHH
T ss_pred CCCEEEEEehH-HHHHHHHHHHhCCCCeEEEEEECCCHHHHHHHHHHhCCCEECCHHHHhcCCCEEEEECCCcccchhHH
Confidence 45799999999 899888888765 4665 478999999988876 6888889999999999999999997633 1
Q ss_pred HHHhcCCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhh
Q 018506 116 LDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSN 157 (355)
Q Consensus 116 ~~vl~~~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~ 157 (355)
+-+.. .++ .|+-|+.---..+++.+++.+...+
T Consensus 85 ~~a~~----al~-----aGkhVl~EKPl~~~ea~~l~~~A~~ 117 (372)
T 4gmf_A 85 QLARH----FLA-----RGVHVIQEHPLHPDDISSLQTLAQE 117 (372)
T ss_dssp HHHHH----HHH-----TTCEEEEESCCCHHHHHHHHHHHHH
T ss_pred HHHHH----HHH-----cCCcEEEecCCCHHHHHHHHHHHHH
Confidence 11111 222 2223333334556777777665543
No 236
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=98.00 E-value=8.6e-06 Score=74.90 Aligned_cols=70 Identities=17% Similarity=0.239 Sum_probs=54.7
Q ss_pred CCCceEEEEcccHHhHHHHHHHHHCCC--cEEEEeCChhHHHH----HHhC-----CCCCCCCHHHHhhcCCEEEEeCCC
Q 018506 43 CQFESVGFIGLGNMGFRMASNLMKAGY--KMAVHDVNCNVMKM----FSDM-----GVPTKETPFEVAEASDVVITMLPS 111 (355)
Q Consensus 43 ~~~mkIgiIG~G~mG~~ia~~L~~~G~--~V~v~dr~~~~~~~----l~~~-----g~~~~~s~~e~~~~aDiVi~~v~~ 111 (355)
...+||+|||+|.||.+++..|+..|+ ++.++|+++++++- +.+. .....++..+++++||+||++...
T Consensus 7 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~~~a~~~aDiVvi~ag~ 86 (326)
T 3vku_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAEYSDAKDADLVVITAGA 86 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTTCSEEEECCCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECcHHHhcCCCEEEECCCC
Confidence 345899999999999999999999887 89999999887763 3321 223344556788999999999754
Q ss_pred c
Q 018506 112 S 112 (355)
Q Consensus 112 ~ 112 (355)
+
T Consensus 87 ~ 87 (326)
T 3vku_A 87 P 87 (326)
T ss_dssp C
T ss_pred C
Confidence 4
No 237
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=98.00 E-value=1.3e-05 Score=73.72 Aligned_cols=68 Identities=18% Similarity=0.212 Sum_probs=52.6
Q ss_pred CceEEEEcccHHhHHHHHHHHHCCC--cEEEEeCChhHHHHH----HhC-----CCCCCCCHHHHhhcCCEEEEeCCCc
Q 018506 45 FESVGFIGLGNMGFRMASNLMKAGY--KMAVHDVNCNVMKMF----SDM-----GVPTKETPFEVAEASDVVITMLPSS 112 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~~G~--~V~v~dr~~~~~~~l----~~~-----g~~~~~s~~e~~~~aDiVi~~v~~~ 112 (355)
.|||+|||+|.+|.+++..|+..++ ++.++|+++++++.. .+. ...+..+..+++++||+||++.+.+
T Consensus 5 ~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~~~~~a~~~aDvVii~ag~~ 83 (318)
T 1ez4_A 5 HQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYSDCKDADLVVITAGAP 83 (318)
T ss_dssp BCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGGGGTTCSEEEECCCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEECCHHHhCCCCEEEECCCCC
Confidence 3899999999999999999998876 899999998877642 221 2223335577889999999998654
No 238
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=97.98 E-value=1.8e-05 Score=71.03 Aligned_cols=94 Identities=12% Similarity=0.063 Sum_probs=65.5
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhC-CC--CC-CCCHHHHh-hcCCEEEEeCCCchHHHHH
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDM-GV--PT-KETPFEVA-EASDVVITMLPSSSHVLDV 118 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~-g~--~~-~~s~~e~~-~~aDiVi~~v~~~~~~~~v 118 (355)
..+++.|+|+|.||.+++..|++.|++|+++||++++++.+.+. +. .. ..+.+++. ..+|+||.+++.... ..+
T Consensus 118 ~~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~DivVn~t~~~~~-~~~ 196 (271)
T 1nyt_A 118 PGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDELEGHEFDLIINATSSGIS-GDI 196 (271)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGGGTTCCCSEEEECCSCGGG-TCC
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeEecHHHhccCCCCEEEECCCCCCC-CCC
Confidence 44789999999999999999999999999999999998777642 21 11 12233333 489999999987532 111
Q ss_pred hcCCC-ccccCCCCCCCeEEEEcCCCC
Q 018506 119 YNGPN-GLLQGGNSVRPQLLIDSSTID 144 (355)
Q Consensus 119 l~~~~-~~l~~~~~~~~~ivi~~st~~ 144 (355)
..+. .++ .++.+++|+....
T Consensus 197 -~~i~~~~l-----~~~~~v~D~~y~p 217 (271)
T 1nyt_A 197 -PAIPSSLI-----HPGIYCYDMFYQK 217 (271)
T ss_dssp -CCCCGGGC-----CTTCEEEESCCCS
T ss_pred -CCCCHHHc-----CCCCEEEEeccCC
Confidence 1111 122 2457999998874
No 239
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=97.98 E-value=4.6e-06 Score=67.50 Aligned_cols=71 Identities=14% Similarity=0.275 Sum_probs=56.9
Q ss_pred CceEEEEcc----cHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHHHHhc
Q 018506 45 FESVGFIGL----GNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYN 120 (355)
Q Consensus 45 ~mkIgiIG~----G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl~ 120 (355)
..+|+|||+ |.+|..++++|.+.||+ +|+++|.. +.+ .|.....++.|+....|++++++|. ..+.+++.
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~~--v~~Vnp~~-~~i--~G~~~y~sl~~l~~~vDlvvi~vp~-~~~~~vv~ 95 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEHGYD--VYPVNPKY-EEV--LGRKCYPSVLDIPDKIEVVDLFVKP-KLTMEYVE 95 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCE--EEEECTTC-SEE--TTEECBSSGGGCSSCCSEEEECSCH-HHHHHHHH
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHCCCE--EEEECCCC-CeE--CCeeccCCHHHcCCCCCEEEEEeCH-HHHHHHHH
Confidence 367999999 79999999999999997 56666654 222 4777888999988889999999997 46677665
Q ss_pred C
Q 018506 121 G 121 (355)
Q Consensus 121 ~ 121 (355)
+
T Consensus 96 ~ 96 (144)
T 2d59_A 96 Q 96 (144)
T ss_dssp H
T ss_pred H
Confidence 4
No 240
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=97.95 E-value=1.9e-05 Score=72.35 Aligned_cols=67 Identities=18% Similarity=0.239 Sum_probs=50.1
Q ss_pred ceEEEEcc-cHHhHHHHHHHHHCC--CcEEEEeCChhH--HHHHHhCC----CCC---CCCHHHHhhcCCEEEEeCCCc
Q 018506 46 ESVGFIGL-GNMGFRMASNLMKAG--YKMAVHDVNCNV--MKMFSDMG----VPT---KETPFEVAEASDVVITMLPSS 112 (355)
Q Consensus 46 mkIgiIG~-G~mG~~ia~~L~~~G--~~V~v~dr~~~~--~~~l~~~g----~~~---~~s~~e~~~~aDiVi~~v~~~ 112 (355)
|||+|||+ |.+|.+++..|+..| ++|.++|+++.. +..+.+.. +.. +++.+++++++|+||++...+
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~~a~dL~~~~~~~~l~~~~~t~d~~~a~~~aDvVvi~ag~~ 79 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGVP 79 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCSCC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCccHHHHHHHhccCcCceEEEecCCCCHHHHhCCCCEEEECCCcC
Confidence 79999998 999999999999988 789999998722 22333321 111 246777899999999997433
No 241
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=97.93 E-value=4e-05 Score=72.92 Aligned_cols=76 Identities=20% Similarity=0.254 Sum_probs=60.3
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCC----CCHH---HH-hhcCCEEEEeCCCchHH
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTK----ETPF---EV-AEASDVVITMLPSSSHV 115 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~----~s~~---e~-~~~aDiVi~~v~~~~~~ 115 (355)
..++|.|+|+|.+|..+++.|.+.|++|+++|+++++++.+.+.|..+. ++.+ ++ ++.+|+||++++++...
T Consensus 3 ~~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~~~~~n 82 (413)
T 3l9w_A 3 HGMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQTN 82 (413)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCSSHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCCChHHH
Confidence 3478999999999999999999999999999999999999988776542 2222 22 46899999999987544
Q ss_pred HHHh
Q 018506 116 LDVY 119 (355)
Q Consensus 116 ~~vl 119 (355)
..++
T Consensus 83 ~~i~ 86 (413)
T 3l9w_A 83 LQLT 86 (413)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4433
No 242
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=97.93 E-value=3.1e-05 Score=72.80 Aligned_cols=83 Identities=20% Similarity=0.253 Sum_probs=65.0
Q ss_pred CCCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCCh------hHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHH
Q 018506 43 CQFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNC------NVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVL 116 (355)
Q Consensus 43 ~~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~------~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~ 116 (355)
-+-.||+|||.|.-|.+-|.+|.++|.+|.+--|.. ...+...+.|..+. +.+|+++.+|+|++.+||. .-.
T Consensus 35 lkgK~IaVIGyGsQG~AqAlNLRDSGv~V~Vglr~~s~~e~~~S~~~A~~~Gf~v~-~~~eA~~~ADvV~~L~PD~-~q~ 112 (491)
T 3ulk_A 35 LQGKKVVIVGCGAQGLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATENGFKVG-TYEELIPQADLVINLTPDK-QHS 112 (491)
T ss_dssp GTTSEEEEESCSHHHHHHHHHHHHTTCEEEEEECHHHHHTTCHHHHHHHHTTCEEE-EHHHHGGGCSEEEECSCGG-GHH
T ss_pred HcCCEEEEeCCChHhHHHHhHHHhcCCcEEEEeCCCCcccccchHHHHHHCCCEec-CHHHHHHhCCEEEEeCChh-hHH
Confidence 355899999999999999999999999999887732 23445556777654 7999999999999999986 444
Q ss_pred HHhcCCCcccc
Q 018506 117 DVYNGPNGLLQ 127 (355)
Q Consensus 117 ~vl~~~~~~l~ 127 (355)
+++..+.+.++
T Consensus 113 ~vy~~I~p~lk 123 (491)
T 3ulk_A 113 DVVRTVQPLMK 123 (491)
T ss_dssp HHHHHHGGGSC
T ss_pred HHHHHHHhhCC
Confidence 56665555554
No 243
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=97.93 E-value=3.1e-05 Score=73.11 Aligned_cols=66 Identities=17% Similarity=0.217 Sum_probs=54.8
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCC--CC---------------------------
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTK--ET--------------------------- 94 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~--~s--------------------------- 94 (355)
.-.+|+|+|+|.+|...++.+...|.+|+++|+++++.+.+.+.|.... ++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~~ 250 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAEA 250 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhHHH
Confidence 4478999999999999999999999999999999998887777665433 11
Q ss_pred HHHHhhcCCEEEEeC
Q 018506 95 PFEVAEASDVVITML 109 (355)
Q Consensus 95 ~~e~~~~aDiVi~~v 109 (355)
..+.++.+|+||.++
T Consensus 251 l~~~~~~aDvVi~~~ 265 (384)
T 1l7d_A 251 VLKELVKTDIAITTA 265 (384)
T ss_dssp HHHHHTTCSEEEECC
T ss_pred HHHHhCCCCEEEECC
Confidence 556778899999998
No 244
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=97.92 E-value=1.6e-05 Score=74.03 Aligned_cols=102 Identities=14% Similarity=0.182 Sum_probs=68.5
Q ss_pred CceEEEEcccHHhH-HHHHHHHHC-CCcE-EEEeCChhHHHHHHh----CCCCCCCCHHHHhhc--CCEEEEeCCCchHH
Q 018506 45 FESVGFIGLGNMGF-RMASNLMKA-GYKM-AVHDVNCNVMKMFSD----MGVPTKETPFEVAEA--SDVVITMLPSSSHV 115 (355)
Q Consensus 45 ~mkIgiIG~G~mG~-~ia~~L~~~-G~~V-~v~dr~~~~~~~l~~----~g~~~~~s~~e~~~~--aDiVi~~v~~~~~~ 115 (355)
++||||||+|.||. ..+..|.+. +++| .++|++ +.+.+.+ .++...++.++++++ .|+|++|+|+....
T Consensus 2 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~--~~~~~a~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~ 79 (349)
T 3i23_A 2 TVKMGFIGFGKSANRYHLPYVMIRETLEVKTIFDLH--VNEKAAAPFKEKGVNFTADLNELLTDPEIELITICTPAHTHY 79 (349)
T ss_dssp CEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECTT--CCHHHHHHHHTTTCEEESCTHHHHSCTTCCEEEECSCGGGHH
T ss_pred eeEEEEEccCHHHHHHHHHHHhhCCCeEEEEEECCC--HHHHHHHhhCCCCCeEECCHHHHhcCCCCCEEEEeCCcHHHH
Confidence 47999999999999 566666654 5665 478887 3333332 356778899999875 89999999988666
Q ss_pred HHHhcCCCccccCCCCCCCeEEEEcC-CCCHHHHHHHHHHHh
Q 018506 116 LDVYNGPNGLLQGGNSVRPQLLIDSS-TIDPQTSRNISAAVS 156 (355)
Q Consensus 116 ~~vl~~~~~~l~~~~~~~~~ivi~~s-t~~~~~~~~l~~~~~ 156 (355)
+.+.. .++. +..++++.- +..+.+.+++.+...
T Consensus 80 ~~~~~----al~a----Gk~Vl~EKP~a~~~~e~~~l~~~a~ 113 (349)
T 3i23_A 80 DLAKQ----AILA----GKSVIVEKPFCDTLEHAEELFALGQ 113 (349)
T ss_dssp HHHHH----HHHT----TCEEEECSCSCSSHHHHHHHHHHHH
T ss_pred HHHHH----HHHc----CCEEEEECCCcCCHHHHHHHHHHHH
Confidence 55443 2332 123555432 345677777766654
No 245
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=97.91 E-value=1.4e-05 Score=73.04 Aligned_cols=65 Identities=18% Similarity=0.255 Sum_probs=50.1
Q ss_pred eEEEEcccHHhHHHHHHHHHCCC-cEEEEeCChhHHHHH----Hh------CCCCC--CCCHHHHhhcCCEEEEeCCCc
Q 018506 47 SVGFIGLGNMGFRMASNLMKAGY-KMAVHDVNCNVMKMF----SD------MGVPT--KETPFEVAEASDVVITMLPSS 112 (355)
Q Consensus 47 kIgiIG~G~mG~~ia~~L~~~G~-~V~v~dr~~~~~~~l----~~------~g~~~--~~s~~e~~~~aDiVi~~v~~~ 112 (355)
||+|||+|.||.+++..|+..|+ +|.++|+++++++.. .+ ..... +.+. +++++||+||++.+.+
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~~ag~~ 78 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGSNSY-EDMRGSDIVLVTAGIG 78 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCSCC
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEECCCH-HHhCCCCEEEEeCCCC
Confidence 79999999999999999998888 699999998876432 11 12222 2454 7889999999996544
No 246
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=97.90 E-value=1.4e-05 Score=73.24 Aligned_cols=67 Identities=18% Similarity=0.197 Sum_probs=51.7
Q ss_pred ceEEEEcccHHhHHHHHHHHHCC--CcEEEEeCChhHHHHH----HhC-----CCCCCCCHHHHhhcCCEEEEeCCCc
Q 018506 46 ESVGFIGLGNMGFRMASNLMKAG--YKMAVHDVNCNVMKMF----SDM-----GVPTKETPFEVAEASDVVITMLPSS 112 (355)
Q Consensus 46 mkIgiIG~G~mG~~ia~~L~~~G--~~V~v~dr~~~~~~~l----~~~-----g~~~~~s~~e~~~~aDiVi~~v~~~ 112 (355)
|||+|||+|.+|.+++..|+..+ .++.++|+++++++.. .+. ...+..+..+++++||+||++.+.+
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~~~~~a~~~aD~Vii~ag~~ 78 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWAGSYGDLEGARAVVLAAGVA 78 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTTEEEEEECCCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEECCHHHhCCCCEEEECCCCC
Confidence 79999999999999999999887 5899999998877642 221 1122223467789999999997554
No 247
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=97.90 E-value=9.2e-06 Score=74.66 Aligned_cols=68 Identities=13% Similarity=0.172 Sum_probs=52.0
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCC--cEEEEeCChhHHHHH----HhC-------CCCCCCCHHHHhhcCCEEEEeCC
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGY--KMAVHDVNCNVMKMF----SDM-------GVPTKETPFEVAEASDVVITMLP 110 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~--~V~v~dr~~~~~~~l----~~~-------g~~~~~s~~e~~~~aDiVi~~v~ 110 (355)
..+||+|||+|.||.+++..|+..|+ +|.++|+++++++.. .+. .+..+.+.++ +++||+||++..
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~-~~daDiVIitaG 98 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV-SAGSKLVVITAG 98 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS-CSSCSEEEECCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH-hCCCCEEEEeCC
Confidence 45899999999999999999999997 899999998876542 221 1222345554 789999999964
Q ss_pred Cc
Q 018506 111 SS 112 (355)
Q Consensus 111 ~~ 112 (355)
.+
T Consensus 99 ~p 100 (330)
T 3ldh_A 99 AR 100 (330)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 248
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=97.88 E-value=3.6e-05 Score=71.06 Aligned_cols=106 Identities=16% Similarity=0.217 Sum_probs=71.6
Q ss_pred CCCCCCCCceEEEEcccHHhH-HHHHHHHHC-CCcE-EEEeCChhHHHHHHhCCCCCCCCHHHHhhc---CCEEEEeCCC
Q 018506 38 SQVPSCQFESVGFIGLGNMGF-RMASNLMKA-GYKM-AVHDVNCNVMKMFSDMGVPTKETPFEVAEA---SDVVITMLPS 111 (355)
Q Consensus 38 ~~~~~~~~mkIgiIG~G~mG~-~ia~~L~~~-G~~V-~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~---aDiVi~~v~~ 111 (355)
...+.|+++||||||+|.||. ..+..|.+. +.+| .++|+++++ .++...++.++++++ .|+|++|+|.
T Consensus 18 ~~~~~M~~~rvgiiG~G~ig~~~~~~~l~~~~~~~lvav~d~~~~~------~g~~~~~~~~~ll~~~~~vD~V~i~tp~ 91 (330)
T 4ew6_A 18 LYFQSMSPINLAIVGVGKIVRDQHLPSIAKNANFKLVATASRHGTV------EGVNSYTTIEAMLDAEPSIDAVSLCMPP 91 (330)
T ss_dssp -CCCCCCCEEEEEECCSHHHHHTHHHHHHHCTTEEEEEEECSSCCC------TTSEEESSHHHHHHHCTTCCEEEECSCH
T ss_pred hccccCCCceEEEEecCHHHHHHHHHHHHhCCCeEEEEEEeCChhh------cCCCccCCHHHHHhCCCCCCEEEEeCCc
Confidence 333346678999999999998 788888875 5664 578998753 466778899998865 8999999997
Q ss_pred chHHHHHhcCCCccccCCCCCCCeEEEEc-CCCCHHHHHHHHHHHhh
Q 018506 112 SSHVLDVYNGPNGLLQGGNSVRPQLLIDS-STIDPQTSRNISAAVSN 157 (355)
Q Consensus 112 ~~~~~~vl~~~~~~l~~~~~~~~~ivi~~-st~~~~~~~~l~~~~~~ 157 (355)
....+-+.. .++. +..++++. -+....+.+++.+...+
T Consensus 92 ~~H~~~~~~----al~a----GkhVl~EKP~a~~~~e~~~l~~~a~~ 130 (330)
T 4ew6_A 92 QYRYEAAYK----ALVA----GKHVFLEKPPGATLSEVADLEALANK 130 (330)
T ss_dssp HHHHHHHHH----HHHT----TCEEEECSSSCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHH----HHHc----CCcEEEeCCCCCCHHHHHHHHHHHHh
Confidence 655544433 2322 11344443 13456666777665543
No 249
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=97.88 E-value=2.7e-05 Score=69.71 Aligned_cols=76 Identities=17% Similarity=0.188 Sum_probs=54.7
Q ss_pred CCCceEEEEc-ccHHhHHHHHHHHHC-CCcEE-EEeCChhHH-----HHHH--hCCCCCCCCHHHHhhcCCEEEEeCCCc
Q 018506 43 CQFESVGFIG-LGNMGFRMASNLMKA-GYKMA-VHDVNCNVM-----KMFS--DMGVPTKETPFEVAEASDVVITMLPSS 112 (355)
Q Consensus 43 ~~~mkIgiIG-~G~mG~~ia~~L~~~-G~~V~-v~dr~~~~~-----~~l~--~~g~~~~~s~~e~~~~aDiVi~~v~~~ 112 (355)
|+||||+|+| +|.||+.+++.+.+. ++++. +++|+++.. ..+. ..++...++++++++++|+||-+.+ +
T Consensus 5 M~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g~~~gv~v~~dl~~ll~~~DVVIDfT~-p 83 (272)
T 4f3y_A 5 MSSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQTGVALTDDIERVCAEADYLIDFTL-P 83 (272)
T ss_dssp -CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTTCCCSCBCBCCHHHHHHHCSEEEECSC-H
T ss_pred ccccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhCCCCCceecCCHHHHhcCCCEEEEcCC-H
Confidence 5689999999 899999999999865 56655 468875321 1111 1256678899999999999999886 4
Q ss_pred hHHHHHh
Q 018506 113 SHVLDVY 119 (355)
Q Consensus 113 ~~~~~vl 119 (355)
..+.+.+
T Consensus 84 ~a~~~~~ 90 (272)
T 4f3y_A 84 EGTLVHL 90 (272)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4555444
No 250
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=97.88 E-value=3.9e-05 Score=66.91 Aligned_cols=70 Identities=17% Similarity=0.048 Sum_probs=50.2
Q ss_pred CCCCCCceEEEEcc-cHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCC-C-----CCCCHHHHhhcCCEEEEeC
Q 018506 40 VPSCQFESVGFIGL-GNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGV-P-----TKETPFEVAEASDVVITML 109 (355)
Q Consensus 40 ~~~~~~mkIgiIG~-G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~-~-----~~~s~~e~~~~aDiVi~~v 109 (355)
....+.|+|.|.|+ |.+|..+++.|++.|++|++.+|++++.+.+.+.++ . ...+..+++...|+||.+.
T Consensus 16 ~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~D~vi~~a 92 (236)
T 3e8x_A 16 NLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLEEDFSHAFASIDAVVFAA 92 (236)
T ss_dssp -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEECCTTSCCGGGGTTCSEEEECC
T ss_pred ccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhCCCceEEEcccHHHHHHHHcCCCEEEECC
Confidence 33456689999987 999999999999999999999999998887766544 2 1134445555666666554
No 251
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=97.87 E-value=5.3e-05 Score=71.34 Aligned_cols=106 Identities=6% Similarity=0.070 Sum_probs=73.2
Q ss_pred CCCceEEEEc-ccHHhHH-HH----HHHHHCCC-cE----------EEEeCChhHHHHHHh-CCCC-CCCCHHHHhhc--
Q 018506 43 CQFESVGFIG-LGNMGFR-MA----SNLMKAGY-KM----------AVHDVNCNVMKMFSD-MGVP-TKETPFEVAEA-- 101 (355)
Q Consensus 43 ~~~mkIgiIG-~G~mG~~-ia----~~L~~~G~-~V----------~v~dr~~~~~~~l~~-~g~~-~~~s~~e~~~~-- 101 (355)
++.+|||||| +|.||.. .+ ..+.+.+. .+ .++||++++++.+.+ .++. ..++.++++++
T Consensus 4 ~~~irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~av~~~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~ 83 (383)
T 3oqb_A 4 TQRLGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDPILVGRSAEKVEALAKRFNIARWTTDLDAALADKN 83 (383)
T ss_dssp CEEEEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEEEEECSSSHHHHHHHHHTTCCCEESCHHHHHHCSS
T ss_pred CceeEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceeeEEEcCCHHHHHHHHHHhCCCcccCCHHHHhcCCC
Confidence 4568999999 9999998 77 77776542 22 499999999988876 5664 67899999865
Q ss_pred CCEEEEeCCCchHHHHHhcCCCccccCCCCCCCeEEEEc-CCCCHHHHHHHHHHHh
Q 018506 102 SDVVITMLPSSSHVLDVYNGPNGLLQGGNSVRPQLLIDS-STIDPQTSRNISAAVS 156 (355)
Q Consensus 102 aDiVi~~v~~~~~~~~vl~~~~~~l~~~~~~~~~ivi~~-st~~~~~~~~l~~~~~ 156 (355)
.|+|++|+|.....+-+.. .++. +..++++- -.....+.+++.+...
T Consensus 84 iD~V~i~tp~~~h~~~~~~----al~~----Gk~V~~EKP~a~~~~~~~~l~~~a~ 131 (383)
T 3oqb_A 84 DTMFFDAATTQARPGLLTQ----AINA----GKHVYCEKPIATNFEEALEVVKLAN 131 (383)
T ss_dssp CCEEEECSCSSSSHHHHHH----HHTT----TCEEEECSCSCSSHHHHHHHHHHHH
T ss_pred CCEEEECCCchHHHHHHHH----HHHC----CCeEEEcCCCCCCHHHHHHHHHHHH
Confidence 8999999998765554433 2322 11344432 2345666777766554
No 252
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=97.86 E-value=1e-05 Score=72.64 Aligned_cols=96 Identities=11% Similarity=0.073 Sum_probs=63.8
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhC-CC--CC-CCCHHHHhh-cCCEEEEeCCCchHHHHH
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDM-GV--PT-KETPFEVAE-ASDVVITMLPSSSHVLDV 118 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~-g~--~~-~~s~~e~~~-~aDiVi~~v~~~~~~~~v 118 (355)
..++|.|+|+|.||.+++..|++.|++|+++||++++++.+.+. +. .. ..+.+++.+ .+|+||.++|.... ..+
T Consensus 118 ~~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~DivIn~t~~~~~-~~~ 196 (272)
T 1p77_A 118 PNQHVLILGAGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSIPLQTYDLVINATSAGLS-GGT 196 (272)
T ss_dssp TTCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCCCSCCSEEEECCCC-------
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCeEEeeHHHhccCCCCEEEECCCCCCC-CCC
Confidence 44789999999999999999999999999999999998887642 11 11 123333323 89999999987633 121
Q ss_pred hcCCC-ccccCCCCCCCeEEEEcCCCCHH
Q 018506 119 YNGPN-GLLQGGNSVRPQLLIDSSTIDPQ 146 (355)
Q Consensus 119 l~~~~-~~l~~~~~~~~~ivi~~st~~~~ 146 (355)
..+. ..+. ++.+++|++..+..
T Consensus 197 -~~i~~~~l~-----~~~~v~D~~y~p~~ 219 (272)
T 1p77_A 197 -ASVDAEILK-----LGSAFYDMQYAKGT 219 (272)
T ss_dssp --CCCHHHHH-----HCSCEEESCCCTTS
T ss_pred -CCCCHHHcC-----CCCEEEEeeCCCCc
Confidence 1111 1221 34688999886543
No 253
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=97.86 E-value=3.1e-05 Score=69.42 Aligned_cols=94 Identities=11% Similarity=0.033 Sum_probs=65.1
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCC-cEEEEeCChhHHHHHHhC-CC--CCCCCHHHHh-hcCCEEEEeCCCchHHHHH
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGY-KMAVHDVNCNVMKMFSDM-GV--PTKETPFEVA-EASDVVITMLPSSSHVLDV 118 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~-~V~v~dr~~~~~~~l~~~-g~--~~~~s~~e~~-~~aDiVi~~v~~~~~~~~v 118 (355)
...++.|+|+|.+|.+++..|.+.|. +|++++|++++++++.+. +. ....+.+++. .++|+||.++|....-..
T Consensus 119 ~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~l~~~~~DivInaTp~gm~~~~- 197 (272)
T 3pwz_A 119 RNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYEALEGQSFDIVVNATSASLTADL- 197 (272)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSGGGTTCCCSEEEECSSGGGGTCC-
T ss_pred cCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHHHhcccCCCEEEECCCCCCCCCC-
Confidence 45789999999999999999999996 899999999999887652 11 0111233332 689999999986532110
Q ss_pred hcCC-CccccCCCCCCCeEEEEcCCCC
Q 018506 119 YNGP-NGLLQGGNSVRPQLLIDSSTID 144 (355)
Q Consensus 119 l~~~-~~~l~~~~~~~~~ivi~~st~~ 144 (355)
..+ ...+ .++.+++|+...+
T Consensus 198 -~~i~~~~l-----~~~~~V~DlvY~P 218 (272)
T 3pwz_A 198 -PPLPADVL-----GEAALAYELAYGK 218 (272)
T ss_dssp -CCCCGGGG-----TTCSEEEESSCSC
T ss_pred -CCCCHHHh-----CcCCEEEEeecCC
Confidence 001 1122 2457899998774
No 254
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=97.85 E-value=3.2e-05 Score=72.78 Aligned_cols=106 Identities=15% Similarity=0.159 Sum_probs=70.9
Q ss_pred CCCceEEEEcccHHhHHHHHHHHHC--------CCc-EEEEeCChhHHHHHHh-CCC-CCCCCHHHHhh--cCCEEEEeC
Q 018506 43 CQFESVGFIGLGNMGFRMASNLMKA--------GYK-MAVHDVNCNVMKMFSD-MGV-PTKETPFEVAE--ASDVVITML 109 (355)
Q Consensus 43 ~~~mkIgiIG~G~mG~~ia~~L~~~--------G~~-V~v~dr~~~~~~~l~~-~g~-~~~~s~~e~~~--~aDiVi~~v 109 (355)
|+.-||||||+|.||..-+..+... +.+ |.++|+++++++.+.+ .++ ...+|.+++++ +.|+|++|+
T Consensus 23 MkkirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~Iat 102 (393)
T 4fb5_A 23 MKPLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGFEKATADWRALIADPEVDVVSVTT 102 (393)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTCSEEESCHHHHHHCTTCCEEEECS
T ss_pred CCCccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCCCeecCCHHHHhcCCCCcEEEECC
Confidence 5556899999999999877766432 345 5688999999988876 455 36789999886 479999999
Q ss_pred CCchHHHHHhcCCCccccCCCCCCCeEEEEc-CCCCHHHHHHHHHHHh
Q 018506 110 PSSSHVLDVYNGPNGLLQGGNSVRPQLLIDS-STIDPQTSRNISAAVS 156 (355)
Q Consensus 110 ~~~~~~~~vl~~~~~~l~~~~~~~~~ivi~~-st~~~~~~~~l~~~~~ 156 (355)
|+....+.++.. ++. +..+++.- -+....+.+++.+...
T Consensus 103 P~~~H~~~a~~a----l~a----GkhVl~EKPla~~~~ea~~l~~~a~ 142 (393)
T 4fb5_A 103 PNQFHAEMAIAA----LEA----GKHVWCEKPMAPAYADAERMLATAE 142 (393)
T ss_dssp CGGGHHHHHHHH----HHT----TCEEEECSCSCSSHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHH----Hhc----CCeEEEccCCcccHHHHHHhhhhHH
Confidence 998776665542 221 11344432 2344666677766654
No 255
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=97.82 E-value=2.5e-05 Score=72.06 Aligned_cols=69 Identities=16% Similarity=0.096 Sum_probs=51.3
Q ss_pred CCceEEEEc-ccHHhHHHHHHHHHCC--CcEEEEeCChhH--HHHHHhCCCC----C---CCCHHHHhhcCCEEEEeCCC
Q 018506 44 QFESVGFIG-LGNMGFRMASNLMKAG--YKMAVHDVNCNV--MKMFSDMGVP----T---KETPFEVAEASDVVITMLPS 111 (355)
Q Consensus 44 ~~mkIgiIG-~G~mG~~ia~~L~~~G--~~V~v~dr~~~~--~~~l~~~g~~----~---~~s~~e~~~~aDiVi~~v~~ 111 (355)
++|||+|+| +|.+|.+++..|...| ++|.++|++++. +..+.+.... . +++..++++++|+||++.+.
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~~~dL~~~~~~~~v~~~~~t~d~~~al~gaDvVi~~ag~ 86 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQQQLEAALTGMDLIIVPAGV 86 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHHHHHHHTSCSSCEEEEEESHHHHHHHHTTCSEEEECCCC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhHHHHhhcccccceEEEEeCCCCHHHHcCCCCEEEEcCCc
Confidence 458999999 8999999999999998 899999988762 2234432211 1 22556788999999999753
Q ss_pred c
Q 018506 112 S 112 (355)
Q Consensus 112 ~ 112 (355)
+
T Consensus 87 ~ 87 (326)
T 1smk_A 87 P 87 (326)
T ss_dssp C
T ss_pred C
Confidence 3
No 256
>2b0j_A 5,10-methenyltetrahydromethanopterin hydrogenase; rossmann fold, helix bundle, oxidoreductase; 1.75A {Methanocaldococcus jannaschii} SCOP: a.100.1.11 c.2.1.6 PDB: 3f47_A* 3daf_A* 3dag_A* 3f46_A* 3h65_A*
Probab=97.80 E-value=0.00063 Score=59.89 Aligned_cols=114 Identities=17% Similarity=0.141 Sum_probs=76.4
Q ss_pred CCCCCCCHHHHhhcCCEEEEeCCCchHHHHHhcCCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHhhchhhhccCCC
Q 018506 88 GVPTKETPFEVAEASDVVITMLPSSSHVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILKEKKDSW 167 (355)
Q Consensus 88 g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl~~~~~~l~~~~~~~~~ivi~~st~~~~~~~~l~~~~~~~~~~~~~g~~ 167 (355)
|+.++++..|+++++|++|+-+|-......++..+-+.+ +++.+|.+++|++|...-.+.+.+.+. ..|
T Consensus 128 GVkVtsDD~EAvk~AEi~IlftPfG~~t~~Iakkii~~l-----pEgAII~nTCTipp~~ly~~le~l~R~----Dvg-- 196 (358)
T 2b0j_A 128 GLKVTSDDREAVEGADIVITWLPKGNKQPDIIKKFADAI-----PEGAIVTHACTIPTTKFAKIFKDLGRE----DLN-- 196 (358)
T ss_dssp TCEEESCHHHHHTTCSEEEECCTTCTTHHHHHHHHGGGS-----CTTCEEEECSSSCHHHHHHHHHHTTCT----TSE--
T ss_pred CcEeecchHHHhcCCCEEEEecCCCCCcHHHHHHHHhhC-----cCCCEEecccCCCHHHHHHHHHHhCcc----cCC--
Confidence 678889999999999999999998865566665543333 477899999999987655544443321 111
Q ss_pred CCceEEeCCCCCChHHHhcCceEEEec-CCHHHHHHHHHHHHHcCCCeEEeC
Q 018506 168 ENPVMLDAPVSGGVLAAEAGTLTFMVG-GSEDAYQAAKPLFLSMGKNTIYCG 218 (355)
Q Consensus 168 ~~~~~~~~pv~g~~~~~~~g~~~~~~g-g~~~~~~~v~~ll~~~g~~~~~~g 218 (355)
...|--+.+-|. .|+.+.-.+ .+++..+++-+|.+..++..+.+.
T Consensus 197 -IsS~HPaaVPgt-----~Gq~~~g~~yAtEEqIeklveLaksa~k~ay~vP 242 (358)
T 2b0j_A 197 -ITSYHPGCVPEM-----KGQVYIAEGYASEEAVNKLYEIGKIARGKAFKMP 242 (358)
T ss_dssp -EEECBCSSCTTT-----CCCEEEEESSSCHHHHHHHHHHHHHHHSCEEEEE
T ss_pred -eeccCCCCCCCC-----CCccccccccCCHHHHHHHHHHHHHhCCCeEecc
Confidence 011222222222 555343333 489999999999999999877543
No 257
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=97.80 E-value=7e-05 Score=68.77 Aligned_cols=104 Identities=14% Similarity=0.122 Sum_probs=72.2
Q ss_pred CCceEEEEcc-cHHhHHHHHHHHHCCCc-EEEEeCChhHHHHHHhC--CCCCCCCHHHHh-----------hcCCEEEEe
Q 018506 44 QFESVGFIGL-GNMGFRMASNLMKAGYK-MAVHDVNCNVMKMFSDM--GVPTKETPFEVA-----------EASDVVITM 108 (355)
Q Consensus 44 ~~mkIgiIG~-G~mG~~ia~~L~~~G~~-V~v~dr~~~~~~~l~~~--g~~~~~s~~e~~-----------~~aDiVi~~ 108 (355)
.|+||||||+ |.||...+..|.+.+.+ |.++|+++++. .+.+. +....++.++++ .+.|+|++|
T Consensus 2 ~mirvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~-~~~~~~~~~~~~~~~~~ll~~~~~l~~~~~~~vD~V~I~ 80 (318)
T 3oa2_A 2 HMKNFALIGAAGYIAPRHMRAIKDTGNCLVSAYDINDSVG-IIDSISPQSEFFTEFEFFLDHASNLKRDSATALDYVSIC 80 (318)
T ss_dssp -CCEEEEETTTSSSHHHHHHHHHHTTCEEEEEECSSCCCG-GGGGTCTTCEEESSHHHHHHHHHHHTTSTTTSCCEEEEC
T ss_pred CceEEEEECCCcHHHHHHHHHHHhCCCEEEEEEcCCHHHH-HHHhhCCCCcEECCHHHHHHhhhhhhhccCCCCcEEEEC
Confidence 4689999999 78999999999998877 45789988763 33332 455677888876 468999999
Q ss_pred CCCchHHHHHhcCCCccccCCCCCCCeEEEEc-CCCCHHHHHHHHHHHh
Q 018506 109 LPSSSHVLDVYNGPNGLLQGGNSVRPQLLIDS-STIDPQTSRNISAAVS 156 (355)
Q Consensus 109 v~~~~~~~~vl~~~~~~l~~~~~~~~~ivi~~-st~~~~~~~~l~~~~~ 156 (355)
+|+....+-+.. .++. +..++++- -+..+.+.+++.+...
T Consensus 81 tP~~~H~~~~~~----al~a----GkhVl~EKPla~~~~ea~~l~~~a~ 121 (318)
T 3oa2_A 81 SPNYLHYPHIAA----GLRL----GCDVICEKPLVPTPEMLDQLAVIER 121 (318)
T ss_dssp SCGGGHHHHHHH----HHHT----TCEEEECSSCCSCHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHH----HHHC----CCeEEEECCCcCCHHHHHHHHHHHH
Confidence 998766555443 2322 11355543 2345677777766554
No 258
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=97.80 E-value=5.1e-05 Score=68.86 Aligned_cols=103 Identities=17% Similarity=0.092 Sum_probs=69.9
Q ss_pred CCCCceEEEEcccHHhHHHHHHHHH----CCCcE-EEEeCChhHHHHHHhCCCCCCCCHHHHhh--cCCEEEEeCCCchH
Q 018506 42 SCQFESVGFIGLGNMGFRMASNLMK----AGYKM-AVHDVNCNVMKMFSDMGVPTKETPFEVAE--ASDVVITMLPSSSH 114 (355)
Q Consensus 42 ~~~~mkIgiIG~G~mG~~ia~~L~~----~G~~V-~v~dr~~~~~~~l~~~g~~~~~s~~e~~~--~aDiVi~~v~~~~~ 114 (355)
+++++||||||+|.||...+..|.+ .+.++ .++||++.. ...++. ..+.+++++ +.|+|++|+|+...
T Consensus 4 ~~~~~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d~~~~a----~~~g~~-~~~~~ell~~~~vD~V~i~tp~~~H 78 (294)
T 1lc0_A 4 NSGKFGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRRELG----SLDEVR-QISLEDALRSQEIDVAYICSESSSH 78 (294)
T ss_dssp CCCSEEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECSSCCC----EETTEE-BCCHHHHHHCSSEEEEEECSCGGGH
T ss_pred CCCcceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEECchHHH----HHcCCC-CCCHHHHhcCCCCCEEEEeCCcHhH
Confidence 3567899999999999999998865 34554 477876321 123443 478999886 68999999998876
Q ss_pred HHHHhcCCCccccCCCCCCCeEEEEc-CCCCHHHHHHHHHHHhh
Q 018506 115 VLDVYNGPNGLLQGGNSVRPQLLIDS-STIDPQTSRNISAAVSN 157 (355)
Q Consensus 115 ~~~vl~~~~~~l~~~~~~~~~ivi~~-st~~~~~~~~l~~~~~~ 157 (355)
.+.+.. .++. +..++++. .+..+.+.+++.+...+
T Consensus 79 ~~~~~~----al~a----GkhVl~EKPla~~~~ea~~l~~~a~~ 114 (294)
T 1lc0_A 79 EDYIRQ----FLQA----GKHVLVEYPMTLSFAAAQELWELAAQ 114 (294)
T ss_dssp HHHHHH----HHHT----TCEEEEESCSCSCHHHHHHHHHHHHH
T ss_pred HHHHHH----HHHC----CCcEEEeCCCCCCHHHHHHHHHHHHH
Confidence 665543 3332 22466664 45567777777776643
No 259
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=97.79 E-value=4.7e-05 Score=71.19 Aligned_cols=68 Identities=15% Similarity=0.171 Sum_probs=54.9
Q ss_pred CceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCC-------CCCHHHHhhcCCEEEEeCCCc
Q 018506 45 FESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPT-------KETPFEVAEASDVVITMLPSS 112 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~-------~~s~~e~~~~aDiVi~~v~~~ 112 (355)
..+|.|+|+|.+|..++..+...|.+|+++||++++.+.+.+.+... ..+..+.+..+|+||.|++.+
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvVI~~~~~~ 241 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLVP 241 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCCCT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCceeEeeeCCHHHHHHHHcCCCEEEECCCcC
Confidence 37899999999999999999999999999999999988876543221 123445667899999998654
No 260
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=97.79 E-value=3.3e-05 Score=71.11 Aligned_cols=68 Identities=18% Similarity=0.268 Sum_probs=51.8
Q ss_pred CCCCceEEEEcccHHhHHHHHHHHHCCC--cEEEEeCChhHHHH----HHhC----C---CCCCCCHHHHhhcCCEEEEe
Q 018506 42 SCQFESVGFIGLGNMGFRMASNLMKAGY--KMAVHDVNCNVMKM----FSDM----G---VPTKETPFEVAEASDVVITM 108 (355)
Q Consensus 42 ~~~~mkIgiIG~G~mG~~ia~~L~~~G~--~V~v~dr~~~~~~~----l~~~----g---~~~~~s~~e~~~~aDiVi~~ 108 (355)
....+||+|||+|.||.+++..|+.+|+ ++.++|+++++++. +.+. . +..+.+. +.+++||+||++
T Consensus 16 ~~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~d~-~~~~~aDiVvi~ 94 (331)
T 4aj2_A 16 QVPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSKDY-SVTANSKLVIIT 94 (331)
T ss_dssp -CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECSSG-GGGTTEEEEEEC
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcCCH-HHhCCCCEEEEc
Confidence 3466899999999999999999999987 89999999887654 3321 1 1123444 468899999999
Q ss_pred CC
Q 018506 109 LP 110 (355)
Q Consensus 109 v~ 110 (355)
..
T Consensus 95 aG 96 (331)
T 4aj2_A 95 AG 96 (331)
T ss_dssp CS
T ss_pred cC
Confidence 64
No 261
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=97.78 E-value=2.9e-05 Score=70.22 Aligned_cols=105 Identities=15% Similarity=0.147 Sum_probs=68.9
Q ss_pred CCCceEEEEcc-cHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhh--cCCEEEEeCCCchHHHHHh
Q 018506 43 CQFESVGFIGL-GNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAE--ASDVVITMLPSSSHVLDVY 119 (355)
Q Consensus 43 ~~~mkIgiIG~-G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~--~aDiVi~~v~~~~~~~~vl 119 (355)
.+.+||+|+|+ |.||..+++.+.+.|++ .++..+|.+... ...|.....|++|+.+ ..|++++++|.. ...+++
T Consensus 5 ~~~~rVaViG~sG~~G~~~~~~l~~~g~~-~V~~V~p~~~g~-~~~G~~vy~sl~el~~~~~~D~viI~tP~~-~~~~~~ 81 (288)
T 2nu8_A 5 DKNTKVICQGFTGSQGTFHSEQAIAYGTK-MVGGVTPGKGGT-THLGLPVFNTVREAVAATGATASVIYVPAP-FCKDSI 81 (288)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHTCE-EEEEECTTCTTC-EETTEEEESSHHHHHHHHCCCEEEECCCGG-GHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCe-EEEEeCCCcccc-eeCCeeccCCHHHHhhcCCCCEEEEecCHH-HHHHHH
Confidence 35589999998 99999999999998988 344555543200 1256777889999987 899999999976 444444
Q ss_pred cCCCccccCCCCCCCeEEEEcCCCC-HHHHHHHHHHHhh
Q 018506 120 NGPNGLLQGGNSVRPQLLIDSSTID-PQTSRNISAAVSN 157 (355)
Q Consensus 120 ~~~~~~l~~~~~~~~~ivi~~st~~-~~~~~~l~~~~~~ 157 (355)
.. .++. +-+.+|..+... ....+++.+...+
T Consensus 82 ~e---a~~~----Gi~~iVi~t~G~~~~~~~~l~~~A~~ 113 (288)
T 2nu8_A 82 LE---AIDA----GIKLIITITEGIPTLDMLTVKVKLDE 113 (288)
T ss_dssp HH---HHHT----TCSEEEECCCCCCHHHHHHHHHHHHH
T ss_pred HH---HHHC----CCCEEEEECCCCCHHHHHHHHHHHHH
Confidence 33 2221 113445455544 4444566665543
No 262
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=97.78 E-value=2.6e-05 Score=69.87 Aligned_cols=66 Identities=14% Similarity=0.244 Sum_probs=52.9
Q ss_pred CceEEEEcccHHhHHHHHHHHHCCC-cEEEEeCChhHHHHHHhC-CCCCCCCHHHHhhcCCEEEEeCCCc
Q 018506 45 FESVGFIGLGNMGFRMASNLMKAGY-KMAVHDVNCNVMKMFSDM-GVPTKETPFEVAEASDVVITMLPSS 112 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~~G~-~V~v~dr~~~~~~~l~~~-g~~~~~s~~e~~~~aDiVi~~v~~~ 112 (355)
..++.|||+|.+|.+++..|.+.|. +|+++||++++++.+.+. +.....+.. ..++|+||.++|..
T Consensus 119 ~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~~~~~~~~--~~~~DivInaTp~g 186 (271)
T 1npy_A 119 NAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYINSLE--NQQADILVNVTSIG 186 (271)
T ss_dssp TSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEESCCT--TCCCSEEEECSSTT
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCccchhhh--cccCCEEEECCCCC
Confidence 3689999999999999999999997 799999999999888753 332221222 35899999999875
No 263
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=97.77 E-value=8.2e-05 Score=68.08 Aligned_cols=104 Identities=16% Similarity=0.174 Sum_probs=72.1
Q ss_pred CCceEEEEcc-cHHhHHHHHHHHHCCCc-EEEEeCChhHHHHHHhC--CCCCCCCHHHHh----------hcCCEEEEeC
Q 018506 44 QFESVGFIGL-GNMGFRMASNLMKAGYK-MAVHDVNCNVMKMFSDM--GVPTKETPFEVA----------EASDVVITML 109 (355)
Q Consensus 44 ~~mkIgiIG~-G~mG~~ia~~L~~~G~~-V~v~dr~~~~~~~l~~~--g~~~~~s~~e~~----------~~aDiVi~~v 109 (355)
.|+||||||+ |.||...+..|.+.+.+ |.++|+++++. .+.+. +....++.++++ .+.|+|++|+
T Consensus 2 ~mirvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~-~~~~~~~~~~~~~~~~~ll~~~~~l~~~~~~vD~V~I~t 80 (312)
T 3o9z_A 2 HMTRFALTGLAGYIAPRHLKAIKEVGGVLVASLDPATNVG-LVDSFFPEAEFFTEPEAFEAYLEDLRDRGEGVDYLSIAS 80 (312)
T ss_dssp -CCEEEEECTTSSSHHHHHHHHHHTTCEEEEEECSSCCCG-GGGGTCTTCEEESCHHHHHHHHHHHHHTTCCCSEEEECS
T ss_pred CceEEEEECCChHHHHHHHHHHHhCCCEEEEEEcCCHHHH-HHHhhCCCCceeCCHHHHHHHhhhhcccCCCCcEEEECC
Confidence 4689999999 78999999999998877 45889998873 33332 456677888887 5789999999
Q ss_pred CCchHHHHHhcCCCccccCCCCCCCeEEEEc-CCCCHHHHHHHHHHHh
Q 018506 110 PSSSHVLDVYNGPNGLLQGGNSVRPQLLIDS-STIDPQTSRNISAAVS 156 (355)
Q Consensus 110 ~~~~~~~~vl~~~~~~l~~~~~~~~~ivi~~-st~~~~~~~~l~~~~~ 156 (355)
|+....+-+.. .++. +..++++- -+....+.+++.+...
T Consensus 81 P~~~H~~~~~~----al~a----GkhVl~EKPla~~~~ea~~l~~~a~ 120 (312)
T 3o9z_A 81 PNHLHYPQIRM----ALRL----GANALSEKPLVLWPEEIARLKELEA 120 (312)
T ss_dssp CGGGHHHHHHH----HHHT----TCEEEECSSSCSCHHHHHHHHHHHH
T ss_pred CchhhHHHHHH----HHHC----CCeEEEECCCCCCHHHHHHHHHHHH
Confidence 98866555443 2322 11344442 2345667777766654
No 264
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=97.77 E-value=3.1e-05 Score=72.72 Aligned_cols=104 Identities=16% Similarity=0.166 Sum_probs=72.8
Q ss_pred CCCceEEEEcccHHhHHHHHHHHHCC--------Cc-EEEEeCChhHHHHHHh-CCC-CCCCCHHHHhh--cCCEEEEeC
Q 018506 43 CQFESVGFIGLGNMGFRMASNLMKAG--------YK-MAVHDVNCNVMKMFSD-MGV-PTKETPFEVAE--ASDVVITML 109 (355)
Q Consensus 43 ~~~mkIgiIG~G~mG~~ia~~L~~~G--------~~-V~v~dr~~~~~~~l~~-~g~-~~~~s~~e~~~--~aDiVi~~v 109 (355)
|++.||||||+|.||...+..+.+.. .+ +.++|+++++++.+.+ .|+ ...+|.+++++ +.|+|++|+
T Consensus 4 M~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~~~a~~~a~~~g~~~~~~d~~~ll~~~~iDaV~I~t 83 (390)
T 4h3v_A 4 MTNLGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDAEAVRAAAGKLGWSTTETDWRTLLERDDVQLVDVCT 83 (390)
T ss_dssp CCEEEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSHHHHHHHHHHHTCSEEESCHHHHTTCTTCSEEEECS
T ss_pred CCcCcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeC
Confidence 45568999999999999888887542 24 4588999999988876 454 45688999885 479999999
Q ss_pred CCchHHHHHhcCCCccccCCCCCCCeEEEEc-CCCCHHHHHHHHHH
Q 018506 110 PSSSHVLDVYNGPNGLLQGGNSVRPQLLIDS-STIDPQTSRNISAA 154 (355)
Q Consensus 110 ~~~~~~~~vl~~~~~~l~~~~~~~~~ivi~~-st~~~~~~~~l~~~ 154 (355)
|+....+-++.. ++. +..+++.- -+....+.+++.+.
T Consensus 84 P~~~H~~~~~~a----l~a----GkhVl~EKPla~t~~ea~~l~~~ 121 (390)
T 4h3v_A 84 PGDSHAEIAIAA----LEA----GKHVLCEKPLANTVAEAEAMAAA 121 (390)
T ss_dssp CGGGHHHHHHHH----HHT----TCEEEEESSSCSSHHHHHHHHHH
T ss_pred ChHHHHHHHHHH----HHc----CCCceeecCcccchhHHHHHHHH
Confidence 998776665542 322 11355543 23446666777444
No 265
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=97.76 E-value=3.3e-05 Score=74.37 Aligned_cols=69 Identities=20% Similarity=0.181 Sum_probs=54.1
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhC-C-C-----CCC--CCHHHHhhcCCEEEEeCCCc
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDM-G-V-----PTK--ETPFEVAEASDVVITMLPSS 112 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~-g-~-----~~~--~s~~e~~~~aDiVi~~v~~~ 112 (355)
.+++|.|+|+|.+|.+++..|++.|++|++++|++++++.+.+. + . ... .+..++++++|+||.++|..
T Consensus 2 ~~k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~~~ 79 (450)
T 1ff9_A 2 ATKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYT 79 (450)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECCC--
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECCccc
Confidence 45789999999999999999999999999999999998877642 1 1 111 13446677899999999864
No 266
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=97.76 E-value=3.1e-05 Score=70.63 Aligned_cols=92 Identities=18% Similarity=0.116 Sum_probs=64.7
Q ss_pred CCCCceEEEEcccHH-hHHHHHHHHHCCCcEEEEeCChhHH----HHHHhCCCC-C-----C--CCHHHHhhcCCEEEEe
Q 018506 42 SCQFESVGFIGLGNM-GFRMASNLMKAGYKMAVHDVNCNVM----KMFSDMGVP-T-----K--ETPFEVAEASDVVITM 108 (355)
Q Consensus 42 ~~~~mkIgiIG~G~m-G~~ia~~L~~~G~~V~v~dr~~~~~----~~l~~~g~~-~-----~--~s~~e~~~~aDiVi~~ 108 (355)
.....++.|||.|.| |..+|+.|...|.+|+++||+..+. +.+... .+ . + .++.+.+.++|+||.+
T Consensus 174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~-~~~~t~~~~t~~~~L~e~l~~ADIVIsA 252 (320)
T 1edz_A 174 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLN-KHHVEDLGEYSEDLLKKCSLDSDVVITG 252 (320)
T ss_dssp TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCC-CCEEEEEEECCHHHHHHHHHHCSEEEEC
T ss_pred CCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhh-cccccccccccHhHHHHHhccCCEEEEC
Confidence 345678999999976 9999999999999999999984432 222211 11 1 1 4678889999999999
Q ss_pred CCCchHHHHHhcCCCccccCCCCCCCeEEEEcCCCC
Q 018506 109 LPSSSHVLDVYNGPNGLLQGGNSVRPQLLIDSSTID 144 (355)
Q Consensus 109 v~~~~~~~~vl~~~~~~l~~~~~~~~~ivi~~st~~ 144 (355)
++.+.. ++. ..+++ ++.++||.+...
T Consensus 253 tg~p~~---vI~--~e~vk-----~GavVIDVgi~r 278 (320)
T 1edz_A 253 VPSENY---KFP--TEYIK-----EGAVCINFACTK 278 (320)
T ss_dssp CCCTTC---CBC--TTTSC-----TTEEEEECSSSC
T ss_pred CCCCcc---eeC--HHHcC-----CCeEEEEcCCCc
Confidence 987521 122 12342 568999998753
No 267
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=97.73 E-value=4.5e-05 Score=72.55 Aligned_cols=104 Identities=18% Similarity=0.233 Sum_probs=74.0
Q ss_pred CceEEEEcccHHhHHHHHHHHHCC---------Cc-EEEEeCChhHHHHHHh-CCC-CCCCCHHHHhh--cCCEEEEeCC
Q 018506 45 FESVGFIGLGNMGFRMASNLMKAG---------YK-MAVHDVNCNVMKMFSD-MGV-PTKETPFEVAE--ASDVVITMLP 110 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~~G---------~~-V~v~dr~~~~~~~l~~-~g~-~~~~s~~e~~~--~aDiVi~~v~ 110 (355)
++||||||+|.||...+..|.+.+ .+ |.++|+++++++++.+ .++ ...+|.+++++ +.|+|++|+|
T Consensus 26 klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~~~~~~~y~d~~~ll~~~~vD~V~I~tp 105 (412)
T 4gqa_A 26 RLNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKLGAEKAYGDWRELVNDPQVDVVDITSP 105 (412)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHHCTTCCEEEECSC
T ss_pred cceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHHcCCCeEECCHHHHhcCCCCCEEEECCC
Confidence 479999999999999998887642 35 4578999999988876 455 46789999986 5799999999
Q ss_pred CchHHHHHhcCCCccccCCCCCCCeEEEEc-CCCCHHHHHHHHHHHh
Q 018506 111 SSSHVLDVYNGPNGLLQGGNSVRPQLLIDS-STIDPQTSRNISAAVS 156 (355)
Q Consensus 111 ~~~~~~~vl~~~~~~l~~~~~~~~~ivi~~-st~~~~~~~~l~~~~~ 156 (355)
+....+-++.. ++. +..+++.- -+....+.+++.+...
T Consensus 106 ~~~H~~~~~~a----l~a----GkhVl~EKP~a~~~~ea~~l~~~a~ 144 (412)
T 4gqa_A 106 NHLHYTMAMAA----IAA----GKHVYCEKPLAVNEQQAQEMAQAAR 144 (412)
T ss_dssp GGGHHHHHHHH----HHT----TCEEEEESCSCSSHHHHHHHHHHHH
T ss_pred cHHHHHHHHHH----HHc----CCCeEeecCCcCCHHHHHHHHHHHH
Confidence 88766655442 322 11345443 2345666777766554
No 268
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=97.67 E-value=0.00011 Score=70.68 Aligned_cols=91 Identities=15% Similarity=0.177 Sum_probs=69.3
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHHH-HhcCC
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLD-VYNGP 122 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~-vl~~~ 122 (355)
.-+++.|+|+|.+|..+|+.|...|.+|+++|+++.+.......++. ..+.+++...+|+|+.+......+.. .+.
T Consensus 264 ~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g~d-v~~lee~~~~aDvVi~atG~~~vl~~e~l~-- 340 (488)
T 3ond_A 264 AGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQATMEGLQ-VLTLEDVVSEADIFVTTTGNKDIIMLDHMK-- 340 (488)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCE-ECCGGGTTTTCSEEEECSSCSCSBCHHHHT--
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhCCc-cCCHHHHHHhcCEEEeCCCChhhhhHHHHH--
Confidence 44789999999999999999999999999999999888777776654 34778888899999988765433222 221
Q ss_pred CccccCCCCCCCeEEEEcCCCC
Q 018506 123 NGLLQGGNSVRPQLLIDSSTID 144 (355)
Q Consensus 123 ~~~l~~~~~~~~~ivi~~st~~ 144 (355)
.+ .++.+|++.+...
T Consensus 341 --~m-----k~gaiVvNaG~~~ 355 (488)
T 3ond_A 341 --KM-----KNNAIVCNIGHFD 355 (488)
T ss_dssp --TS-----CTTEEEEESSSTT
T ss_pred --hc-----CCCeEEEEcCCCC
Confidence 12 2456888887653
No 269
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=97.67 E-value=4.8e-05 Score=73.50 Aligned_cols=96 Identities=19% Similarity=0.215 Sum_probs=66.0
Q ss_pred CCCceEEEEcccHHhHHHHHHHHHC-CCcEEEEeCChhHHHHHHhC-CCCC----CC---CHHHHhhcCCEEEEeCCCch
Q 018506 43 CQFESVGFIGLGNMGFRMASNLMKA-GYKMAVHDVNCNVMKMFSDM-GVPT----KE---TPFEVAEASDVVITMLPSSS 113 (355)
Q Consensus 43 ~~~mkIgiIG~G~mG~~ia~~L~~~-G~~V~v~dr~~~~~~~l~~~-g~~~----~~---s~~e~~~~aDiVi~~v~~~~ 113 (355)
..+++|.|+|+|.+|.+++..|++. |++|++++|++++++.+.+. ++.. .. ++.++++.+|+||.|+|...
T Consensus 21 l~~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvVIn~tp~~~ 100 (467)
T 2axq_A 21 HMGKNVLLLGSGFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVVISLIPYTF 100 (467)
T ss_dssp --CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEEEECSCGGG
T ss_pred CCCCEEEEECChHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEEEECCchhh
Confidence 3457899999999999999999998 78999999999998887653 3211 11 34556789999999998652
Q ss_pred HHHHHhcCCCccccCCCCCCCeEEEEcCCCCHHH
Q 018506 114 HVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQT 147 (355)
Q Consensus 114 ~~~~vl~~~~~~l~~~~~~~~~ivi~~st~~~~~ 147 (355)
. ..+... .+. .+..++|.+...|..
T Consensus 101 ~-~~v~~a---~l~-----~g~~vvd~~~~~p~~ 125 (467)
T 2axq_A 101 H-PNVVKS---AIR-----TKTDVVTSSYISPAL 125 (467)
T ss_dssp H-HHHHHH---HHH-----HTCEEEECSCCCHHH
T ss_pred h-HHHHHH---HHh-----cCCEEEEeecCCHHH
Confidence 2 122211 121 234677776655553
No 270
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=97.66 E-value=7.9e-05 Score=67.16 Aligned_cols=97 Identities=20% Similarity=0.196 Sum_probs=66.7
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCC-cEEEEeCChhHHHHHHhC------CCC--CC--CCHHHHhhcCCEEEEeCCCc
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGY-KMAVHDVNCNVMKMFSDM------GVP--TK--ETPFEVAEASDVVITMLPSS 112 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~-~V~v~dr~~~~~~~l~~~------g~~--~~--~s~~e~~~~aDiVi~~v~~~ 112 (355)
...++.|+|+|.+|.+++..|++.|. +|++++|++++++.+.+. +.. .. +++.+.+.++|+||-++|..
T Consensus 126 ~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l~~~DiVInaTp~G 205 (283)
T 3jyo_A 126 KLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNATPMG 205 (283)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHHHHSSEEEECSSTT
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHHhcCCEEEECCCCC
Confidence 45689999999999999999999998 699999999998876541 111 22 36778888999999999853
Q ss_pred hHHHHHhcCCCccccCCCCCCCeEEEEcCCCCH
Q 018506 113 SHVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDP 145 (355)
Q Consensus 113 ~~~~~vl~~~~~~l~~~~~~~~~ivi~~st~~~ 145 (355)
-.-..-..-...++ .++.+++|+.-.+.
T Consensus 206 m~~~~~~pi~~~~l-----~~~~~v~DlvY~P~ 233 (283)
T 3jyo_A 206 MPAHPGTAFDVSCL-----TKDHWVGDVVYMPI 233 (283)
T ss_dssp STTSCSCSSCGGGC-----CTTCEEEECCCSSS
T ss_pred CCCCCCCCCCHHHh-----CCCCEEEEecCCCC
Confidence 11000000001122 24568889877653
No 271
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=97.66 E-value=5.6e-05 Score=68.41 Aligned_cols=64 Identities=14% Similarity=0.286 Sum_probs=47.5
Q ss_pred ceEEEEcccHHhHHHHHHHHHCCC--cEEEEeCChhHHH----HHHh----CC--CCC-CCCHHHHhhcCCEEEEeC
Q 018506 46 ESVGFIGLGNMGFRMASNLMKAGY--KMAVHDVNCNVMK----MFSD----MG--VPT-KETPFEVAEASDVVITML 109 (355)
Q Consensus 46 mkIgiIG~G~mG~~ia~~L~~~G~--~V~v~dr~~~~~~----~l~~----~g--~~~-~~s~~e~~~~aDiVi~~v 109 (355)
|||+|||+|.+|.++|..|..++. ++.++|+++++++ .+.. .+ ... .++..+.+++||+||++.
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~d~~~~~~aDvVvitA 77 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSLLKGSEIIVVTA 77 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEESCGGGGTTCSEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCCCHHHhCCCCEEEEec
Confidence 899999999999999999988774 7999999986643 2322 11 111 123346778999999996
No 272
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=97.65 E-value=2.7e-05 Score=68.06 Aligned_cols=71 Identities=11% Similarity=0.088 Sum_probs=47.2
Q ss_pred CCCCCCceEEEEc-ccHHhHHHHHHHHHCC-CcEEEEeCChhHHHHHHhCCC-----CC--CCCHHHHhhcCCEEEEeCC
Q 018506 40 VPSCQFESVGFIG-LGNMGFRMASNLMKAG-YKMAVHDVNCNVMKMFSDMGV-----PT--KETPFEVAEASDVVITMLP 110 (355)
Q Consensus 40 ~~~~~~mkIgiIG-~G~mG~~ia~~L~~~G-~~V~v~dr~~~~~~~l~~~g~-----~~--~~s~~e~~~~aDiVi~~v~ 110 (355)
...+.|++|.|.| .|.+|..+++.|++.| ++|++++|++++.+.+...++ .. ..+..++++.+|+||.+..
T Consensus 18 ~~~~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~ 97 (236)
T 3qvo_A 18 YFQGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQAMQGQDIVYANLT 97 (236)
T ss_dssp ----CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHHHTTCSEEEEECC
T ss_pred eecCcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHHHhcCCCEEEEcCC
Confidence 3345667899998 7999999999999999 899999999887554332221 11 1123345566677766654
No 273
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=97.64 E-value=1.5e-05 Score=68.73 Aligned_cols=69 Identities=19% Similarity=0.241 Sum_probs=46.9
Q ss_pred CCceEEEEcccHHhHHHHHH--HHHCCCcE-EEEeCChhHHHHHHh-CCCCCCCCHHHHhhcCCEEEEeCCCc
Q 018506 44 QFESVGFIGLGNMGFRMASN--LMKAGYKM-AVHDVNCNVMKMFSD-MGVPTKETPFEVAEASDVVITMLPSS 112 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~--L~~~G~~V-~v~dr~~~~~~~l~~-~g~~~~~s~~e~~~~aDiVi~~v~~~ 112 (355)
..++|+|||+|++|..+++. +...|+++ .++|+++++...... .++...+++.+.+++.|+|++|+|+.
T Consensus 84 ~~~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~dp~k~g~~i~gv~V~~~~dl~eli~~~D~ViIAvPs~ 156 (215)
T 2vt3_A 84 EMTDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDINESKIGTEVGGVPVYNLDDLEQHVKDESVAILTVPAV 156 (215)
T ss_dssp ---CEEEECCSHHHHHHHHCC------CCEEEEEESCTTTTTCEETTEEEEEGGGHHHHCSSCCEEEECSCHH
T ss_pred CCCEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeCCHHHHHhHhcCCeeechhhHHHHHHhCCEEEEecCch
Confidence 34789999999999999994 44567775 577999988765332 12333567788876669999999974
No 274
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=97.62 E-value=0.00016 Score=65.03 Aligned_cols=102 Identities=14% Similarity=0.124 Sum_probs=64.8
Q ss_pred CCceEEEEc-ccHHhHHHHHHHHHC-CCcE-EEEeCChhH-----HHHHH---hCCCCCCCCHHHHhhcCCEEEEeCCCc
Q 018506 44 QFESVGFIG-LGNMGFRMASNLMKA-GYKM-AVHDVNCNV-----MKMFS---DMGVPTKETPFEVAEASDVVITMLPSS 112 (355)
Q Consensus 44 ~~mkIgiIG-~G~mG~~ia~~L~~~-G~~V-~v~dr~~~~-----~~~l~---~~g~~~~~s~~e~~~~aDiVi~~v~~~ 112 (355)
.++||+|+| +|.||+.+++.+.+. +.++ .+++++++. +..+. ..|+.+++++++++.++|+||-+.+ +
T Consensus 20 ~~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~gel~G~~~~gv~v~~dl~~ll~~aDVvIDFT~-p 98 (288)
T 3ijp_A 20 GSMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDASILIGSDFLGVRITDDPESAFSNTEGILDFSQ-P 98 (288)
T ss_dssp -CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBGGGGTTCSCCSCBCBSCHHHHTTSCSEEEECSC-H
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccchHHhhccCcCCceeeCCHHHHhcCCCEEEEcCC-H
Confidence 457999999 999999999998864 5664 466886432 12222 2467788999999999999998775 3
Q ss_pred hHHHHHhcCCCccccCCCCCCCeEEEEcCCCC-HHHHHHHHHH
Q 018506 113 SHVLDVYNGPNGLLQGGNSVRPQLLIDSSTID-PQTSRNISAA 154 (355)
Q Consensus 113 ~~~~~vl~~~~~~l~~~~~~~~~ivi~~st~~-~~~~~~l~~~ 154 (355)
..+.+.+.. .++ .+.-+|..||+. ++...++.+.
T Consensus 99 ~a~~~~~~~---~l~-----~Gv~vViGTTG~~~e~~~~L~~a 133 (288)
T 3ijp_A 99 QASVLYANY---AAQ-----KSLIHIIGTTGFSKTEEAQIADF 133 (288)
T ss_dssp HHHHHHHHH---HHH-----HTCEEEECCCCCCHHHHHHHHHH
T ss_pred HHHHHHHHH---HHH-----cCCCEEEECCCCCHHHHHHHHHH
Confidence 444443322 232 233455555554 4343444443
No 275
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=97.62 E-value=4.3e-05 Score=73.84 Aligned_cols=69 Identities=16% Similarity=0.317 Sum_probs=54.7
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHh-CCCCC----CCC---HHHH-hhcCCEEEEeCCCc
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSD-MGVPT----KET---PFEV-AEASDVVITMLPSS 112 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~-~g~~~----~~s---~~e~-~~~aDiVi~~v~~~ 112 (355)
..|||-|+|+|.+|..+|+.|.+.||+|++.|+++++++.+.+ .++.. .++ +.++ +++||++|.++.++
T Consensus 2 ~~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~t~~D 79 (461)
T 4g65_A 2 NAMKIIILGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVAVTNTD 79 (461)
T ss_dssp CCEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEECCSCH
T ss_pred CcCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEEEcCCh
Confidence 3599999999999999999999999999999999999998875 34321 122 3333 46899988877765
No 276
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=97.61 E-value=0.00015 Score=64.34 Aligned_cols=76 Identities=13% Similarity=0.218 Sum_probs=60.3
Q ss_pred CCceEEEEcccH-HhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHHHHhcCC
Q 018506 44 QFESVGFIGLGN-MGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNGP 122 (355)
Q Consensus 44 ~~mkIgiIG~G~-mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl~~~ 122 (355)
.-.++.|||.|. +|.++|..|...|.+|++++++ +.++.+.++++|+||.+++.+.. +.
T Consensus 149 ~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~--------------t~~L~~~~~~ADIVI~Avg~p~~----I~-- 208 (276)
T 3ngx_A 149 HENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSK--------------TKDIGSMTRSSKIVVVAVGRPGF----LN-- 208 (276)
T ss_dssp CSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT--------------CSCHHHHHHHSSEEEECSSCTTC----BC--
T ss_pred CCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCC--------------cccHHHhhccCCEEEECCCCCcc----cc--
Confidence 457899999985 8999999999999999999874 35788999999999999987632 22
Q ss_pred CccccCCCCCCCeEEEEcCCCC
Q 018506 123 NGLLQGGNSVRPQLLIDSSTID 144 (355)
Q Consensus 123 ~~~l~~~~~~~~~ivi~~st~~ 144 (355)
..+++ ++.+|||.+...
T Consensus 209 ~~~vk-----~GavVIDvgi~~ 225 (276)
T 3ngx_A 209 REMVT-----PGSVVIDVGINY 225 (276)
T ss_dssp GGGCC-----TTCEEEECCCEE
T ss_pred Hhhcc-----CCcEEEEeccCc
Confidence 12443 567999987654
No 277
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=97.58 E-value=0.00012 Score=66.94 Aligned_cols=74 Identities=24% Similarity=0.267 Sum_probs=52.6
Q ss_pred CCceEEEEcccHHhHHHHHHHHH-C-CCc-EEEEeCChhH-HHHHH-hCCCCC-CCCHHHHhh-----cCCEEEEeCCCc
Q 018506 44 QFESVGFIGLGNMGFRMASNLMK-A-GYK-MAVHDVNCNV-MKMFS-DMGVPT-KETPFEVAE-----ASDVVITMLPSS 112 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~-~-G~~-V~v~dr~~~~-~~~l~-~~g~~~-~~s~~e~~~-----~aDiVi~~v~~~ 112 (355)
+++||||||+|.+|..++..|.+ . +.+ +.++|+++++ ...+. +.|... .++.+++++ +.|+||+|+|..
T Consensus 3 ~~irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g~~~~~~~~e~ll~~~~~~~iDvV~~atp~~ 82 (312)
T 1nvm_B 3 QKLKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTYAGVEGLIKLPEFADIDFVFDATSAS 82 (312)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEESSHHHHHHHSGGGGGEEEEEECSCHH
T ss_pred CCCEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcCCCcccCCHHHHHhccCCCCCcEEEECCChH
Confidence 35799999999999999999966 3 445 4577999887 45543 456543 345666653 579999999965
Q ss_pred hHHHH
Q 018506 113 SHVLD 117 (355)
Q Consensus 113 ~~~~~ 117 (355)
...+.
T Consensus 83 ~h~~~ 87 (312)
T 1nvm_B 83 AHVQN 87 (312)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44333
No 278
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=97.58 E-value=0.00012 Score=67.41 Aligned_cols=65 Identities=15% Similarity=0.261 Sum_probs=51.7
Q ss_pred CCceEEEEcccHHhHH-HHHHHHHCCCcEEEEeCCh--hHHHHHHhCCCCCC--CCHHHHh-hcCCEEEEe
Q 018506 44 QFESVGFIGLGNMGFR-MASNLMKAGYKMAVHDVNC--NVMKMFSDMGVPTK--ETPFEVA-EASDVVITM 108 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~-ia~~L~~~G~~V~v~dr~~--~~~~~l~~~g~~~~--~s~~e~~-~~aDiVi~~ 108 (355)
.++||.|||.|.+|.+ +|+.|.+.|++|+++|+++ ...+.+.+.|+.+. .+++++. .++|+||++
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~~~~~~~L~~~gi~v~~g~~~~~l~~~~~d~vV~S 73 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMYPPMSTQLEALGIDVYEGFDAAQLDEFKADVYVIG 73 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHTTCEEEESCCGGGGGSCCCSEEEEC
T ss_pred CCcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCCcHHHHHHHhCCCEEECCCCHHHcCCCCCCEEEEC
Confidence 4689999999999995 9999999999999999864 35667877777543 3444554 479999987
No 279
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=97.57 E-value=6.1e-05 Score=67.54 Aligned_cols=76 Identities=17% Similarity=0.236 Sum_probs=51.6
Q ss_pred CCCceEEEEcc-cHHhHHHHHHHHH-CCCcEE-EEeCChhHH-----HHH---HhCCCCCCCCHHHHhhcCCEEEEeCCC
Q 018506 43 CQFESVGFIGL-GNMGFRMASNLMK-AGYKMA-VHDVNCNVM-----KMF---SDMGVPTKETPFEVAEASDVVITMLPS 111 (355)
Q Consensus 43 ~~~mkIgiIG~-G~mG~~ia~~L~~-~G~~V~-v~dr~~~~~-----~~l---~~~g~~~~~s~~e~~~~aDiVi~~v~~ 111 (355)
+++|||+|+|+ |.||..+++.+.+ .|+++. ++|+++++. ..+ ...++...++++++++++|+||-+.+
T Consensus 3 ~~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l~~~DvVIDft~- 81 (273)
T 1dih_A 3 DANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFTR- 81 (273)
T ss_dssp CCBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCSEEEECSC-
T ss_pred CCCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCCcCCceecCCHHHHhcCCCEEEEcCC-
Confidence 45689999998 9999999998874 577865 778876431 111 11234456677787888999995553
Q ss_pred chHHHHHh
Q 018506 112 SSHVLDVY 119 (355)
Q Consensus 112 ~~~~~~vl 119 (355)
|....+.+
T Consensus 82 p~~~~~~~ 89 (273)
T 1dih_A 82 PEGTLNHL 89 (273)
T ss_dssp HHHHHHHH
T ss_pred hHHHHHHH
Confidence 33444444
No 280
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=97.56 E-value=5.5e-05 Score=66.59 Aligned_cols=82 Identities=21% Similarity=0.245 Sum_probs=58.9
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCCcE-EEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHHHHhcCC
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGYKM-AVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNGP 122 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~~V-~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl~~~ 122 (355)
-.|||+++|+|+||..+++. . ++++ .+|+ ++..++ |+..+++++++++++|+|+.|-+. .++++....
T Consensus 11 ~~~rV~i~G~GaIG~~v~~~--~-~leLv~v~~---~k~gel---gv~a~~d~d~lla~pD~VVe~A~~-~av~e~~~~- 79 (253)
T 1j5p_A 11 HHMTVLIIGMGNIGKKLVEL--G-NFEKIYAYD---RISKDI---PGVVRLDEFQVPSDVSTVVECASP-EAVKEYSLQ- 79 (253)
T ss_dssp CCCEEEEECCSHHHHHHHHH--S-CCSEEEEEC---SSCCCC---SSSEECSSCCCCTTCCEEEECSCH-HHHHHHHHH-
T ss_pred ccceEEEECcCHHHHHHHhc--C-CcEEEEEEe---cccccc---CceeeCCHHHHhhCCCEEEECCCH-HHHHHHHHH-
Confidence 45999999999999999998 4 7885 5667 443333 666778888888899999999864 577764433
Q ss_pred CccccCCCCCCCeEEEEcCCC
Q 018506 123 NGLLQGGNSVRPQLLIDSSTI 143 (355)
Q Consensus 123 ~~~l~~~~~~~~~ivi~~st~ 143 (355)
+|+ .|+-++.+|.+
T Consensus 80 --iL~-----aG~dvv~~S~g 93 (253)
T 1j5p_A 80 --ILK-----NPVNYIIISTS 93 (253)
T ss_dssp --HTT-----SSSEEEECCGG
T ss_pred --HHH-----CCCCEEEcChh
Confidence 554 33455555554
No 281
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=97.55 E-value=9.4e-05 Score=66.27 Aligned_cols=65 Identities=14% Similarity=0.166 Sum_probs=52.0
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCC----CCHHHHhhcCCEEEEeCC
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTK----ETPFEVAEASDVVITMLP 110 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~----~s~~e~~~~aDiVi~~v~ 110 (355)
+||||.|.|+|.+|+.++..|.++||+|++.+|++++.+.+...++... .+++ +.++|+||-+..
T Consensus 4 m~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~--~~~~d~vi~~a~ 72 (286)
T 3ius_A 4 MTGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAEPLLWPGEEPS--LDGVTHLLISTA 72 (286)
T ss_dssp -CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTTEEEEESSSSCCC--CTTCCEEEECCC
T ss_pred CcCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCCCeEEEecccccc--cCCCCEEEECCC
Confidence 3589999999999999999999999999999999998877766543211 1222 678999998874
No 282
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=97.53 E-value=8e-05 Score=68.85 Aligned_cols=104 Identities=10% Similarity=0.041 Sum_probs=67.4
Q ss_pred CceEEEEcccHHhHHHHHHHHHCCCcEE-EEeCCh-hHHHHHHh----CC--CCCCCCHHHHhh--cCCEEEEeCCCchH
Q 018506 45 FESVGFIGLGNMGFRMASNLMKAGYKMA-VHDVNC-NVMKMFSD----MG--VPTKETPFEVAE--ASDVVITMLPSSSH 114 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~~G~~V~-v~dr~~-~~~~~l~~----~g--~~~~~s~~e~~~--~aDiVi~~v~~~~~ 114 (355)
++||||||+|.+|...+..| ..+.+|+ ++|+++ ++.+.+.+ .+ ....+|.+++++ +.|+|++|+|+...
T Consensus 2 ~~rvgiiG~G~~~~~~~~~l-~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~I~tp~~~H 80 (337)
T 3ip3_A 2 SLKICVIGSSGHFRYALEGL-DEECSITGIAPGVPEEDLSKLEKAISEMNIKPKKYNNWWEMLEKEKPDILVINTVFSLN 80 (337)
T ss_dssp CEEEEEECSSSCHHHHHTTC-CTTEEEEEEECSSTTCCCHHHHHHHHTTTCCCEECSSHHHHHHHHCCSEEEECSSHHHH
T ss_pred ceEEEEEccchhHHHHHHhc-CCCcEEEEEecCCchhhHHHHHHHHHHcCCCCcccCCHHHHhcCCCCCEEEEeCCcchH
Confidence 57999999999999888877 5567754 789887 34333322 24 356789999986 48999999998765
Q ss_pred HHHHhcCCCccccCCCCCCCeEEEEc-CCCCHHHHHHHHHHHhh
Q 018506 115 VLDVYNGPNGLLQGGNSVRPQLLIDS-STIDPQTSRNISAAVSN 157 (355)
Q Consensus 115 ~~~vl~~~~~~l~~~~~~~~~ivi~~-st~~~~~~~~l~~~~~~ 157 (355)
.+-+.. .++. +..++++- -+....+.+++.+...+
T Consensus 81 ~~~~~~----al~a----GkhVl~EKPla~~~~ea~~l~~~a~~ 116 (337)
T 3ip3_A 81 GKILLE----ALER----KIHAFVEKPIATTFEDLEKIRSVYQK 116 (337)
T ss_dssp HHHHHH----HHHT----TCEEEECSSSCSSHHHHHHHHHHHHH
T ss_pred HHHHHH----HHHC----CCcEEEeCCCCCCHHHHHHHHHHHHH
Confidence 544433 2321 11244432 23346666777666543
No 283
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=97.52 E-value=0.00014 Score=62.68 Aligned_cols=42 Identities=7% Similarity=0.171 Sum_probs=36.1
Q ss_pred CCce-EEEEc-ccHHhHHHHHHHH-HCCCcEEEEeCChh-HHHHHH
Q 018506 44 QFES-VGFIG-LGNMGFRMASNLM-KAGYKMAVHDVNCN-VMKMFS 85 (355)
Q Consensus 44 ~~mk-IgiIG-~G~mG~~ia~~L~-~~G~~V~v~dr~~~-~~~~l~ 85 (355)
.||| |.|.| .|.+|..+++.|+ +.|++|++.+|+++ +++.+.
T Consensus 3 ~mmk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~ 48 (221)
T 3r6d_A 3 AMYXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI 48 (221)
T ss_dssp CSCSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH
T ss_pred ceEEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc
Confidence 3466 99998 6999999999999 89999999999988 766653
No 284
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=97.50 E-value=0.00032 Score=64.74 Aligned_cols=73 Identities=18% Similarity=0.292 Sum_probs=54.9
Q ss_pred CceEEEEcccHHhHHHHHHHHHCC-CcE-EEEeCChhHHHHHHh-CC------------------CCCCCCHHHHhhcCC
Q 018506 45 FESVGFIGLGNMGFRMASNLMKAG-YKM-AVHDVNCNVMKMFSD-MG------------------VPTKETPFEVAEASD 103 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~~G-~~V-~v~dr~~~~~~~l~~-~g------------------~~~~~s~~e~~~~aD 103 (355)
|+||||+|+|.||..+++.|.+.. .++ .++|++++++..+.+ .| +....+.++++.+.|
T Consensus 2 ~irVgIiG~G~iG~~~~r~l~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~v~~d~~~l~~~vD 81 (334)
T 2czc_A 2 KVKVGVNGYGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEKVD 81 (334)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTTCS
T ss_pred CcEEEEEeEhHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHHHHHhcCccccccccccceeccCCceEEcCcHHHhccCCC
Confidence 469999999999999999998753 454 566888777765543 32 244567888888999
Q ss_pred EEEEeCCCchHHHH
Q 018506 104 VVITMLPSSSHVLD 117 (355)
Q Consensus 104 iVi~~v~~~~~~~~ 117 (355)
+|++|+|.....+.
T Consensus 82 vV~~aTp~~~h~~~ 95 (334)
T 2czc_A 82 IIVDATPGGIGAKN 95 (334)
T ss_dssp EEEECCSTTHHHHH
T ss_pred EEEECCCccccHHH
Confidence 99999997654333
No 285
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=97.50 E-value=5.6e-05 Score=68.01 Aligned_cols=67 Identities=15% Similarity=0.041 Sum_probs=52.3
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCC-cEEEEeCChhHHHHHHhCC-CCCCCCHHHHhhcCCEEEEeCCCc
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGY-KMAVHDVNCNVMKMFSDMG-VPTKETPFEVAEASDVVITMLPSS 112 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~-~V~v~dr~~~~~~~l~~~g-~~~~~s~~e~~~~aDiVi~~v~~~ 112 (355)
...++.|+|+|.+|.+++..|.+.|. +|++++|++++++.+.+.- .....++.+ + ++|+||.++|..
T Consensus 121 ~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~~~~~~~~~l~~-l-~~DivInaTp~G 189 (282)
T 3fbt_A 121 KNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEFKVISYDELSN-L-KGDVIINCTPKG 189 (282)
T ss_dssp TTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTTSEEEEHHHHTT-C-CCSEEEECSSTT
T ss_pred cCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhcCcccHHHHHh-c-cCCEEEECCccC
Confidence 45789999999999999999999998 8999999999998887531 111112223 3 799999999753
No 286
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=97.49 E-value=0.00014 Score=69.10 Aligned_cols=68 Identities=12% Similarity=0.151 Sum_probs=52.3
Q ss_pred CceEEEEcccHHhHHHHHHHHHCCC---cEEEEeCChhHHHHHHhC-------CCC-----C--CCCHHHHhhc--CCEE
Q 018506 45 FESVGFIGLGNMGFRMASNLMKAGY---KMAVHDVNCNVMKMFSDM-------GVP-----T--KETPFEVAEA--SDVV 105 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~~G~---~V~v~dr~~~~~~~l~~~-------g~~-----~--~~s~~e~~~~--aDiV 105 (355)
|+||.|+|+|.+|..++..|++.|. +|++++|++++++.+.+. .+. . ..+..+++++ +|+|
T Consensus 1 M~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~DvV 80 (405)
T 4ina_A 1 MAKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQIV 80 (405)
T ss_dssp -CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCEE
Confidence 4799999999999999999999983 899999999998776541 121 1 1234556666 8999
Q ss_pred EEeCCCc
Q 018506 106 ITMLPSS 112 (355)
Q Consensus 106 i~~v~~~ 112 (355)
|.+.+..
T Consensus 81 in~ag~~ 87 (405)
T 4ina_A 81 LNIALPY 87 (405)
T ss_dssp EECSCGG
T ss_pred EECCCcc
Confidence 9998754
No 287
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=97.49 E-value=0.00018 Score=64.79 Aligned_cols=76 Identities=17% Similarity=0.221 Sum_probs=58.8
Q ss_pred CCceEEEEcccH-HhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHH--HHhhcCCEEEEeCCCchHHHHHhc
Q 018506 44 QFESVGFIGLGN-MGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPF--EVAEASDVVITMLPSSSHVLDVYN 120 (355)
Q Consensus 44 ~~mkIgiIG~G~-mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~--e~~~~aDiVi~~v~~~~~~~~vl~ 120 (355)
.-.++.|||.|. +|.+++..|.+.|.+|++++|... +++ +.++++|+||.+++.+.. +.
T Consensus 164 ~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~--------------~l~l~~~~~~ADIVI~Avg~p~~----I~ 225 (300)
T 4a26_A 164 AGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTS--------------TEDMIDYLRTADIVIAAMGQPGY----VK 225 (300)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSC--------------HHHHHHHHHTCSEEEECSCCTTC----BC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCC--------------CchhhhhhccCCEEEECCCCCCC----Cc
Confidence 457899999887 799999999999999999997432 344 888999999999997632 22
Q ss_pred CCCccccCCCCCCCeEEEEcCCCC
Q 018506 121 GPNGLLQGGNSVRPQLLIDSSTID 144 (355)
Q Consensus 121 ~~~~~l~~~~~~~~~ivi~~st~~ 144 (355)
..+++ ++.+|||.+...
T Consensus 226 --~~~vk-----~GavVIDvgi~~ 242 (300)
T 4a26_A 226 --GEWIK-----EGAAVVDVGTTP 242 (300)
T ss_dssp --GGGSC-----TTCEEEECCCEE
T ss_pred --HHhcC-----CCcEEEEEeccC
Confidence 12443 567999997653
No 288
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=97.48 E-value=0.00029 Score=60.56 Aligned_cols=66 Identities=12% Similarity=0.087 Sum_probs=50.8
Q ss_pred ceEEEEcc-cHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCC-----CCCCHHHHhhcCCEEEEeCCC
Q 018506 46 ESVGFIGL-GNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVP-----TKETPFEVAEASDVVITMLPS 111 (355)
Q Consensus 46 mkIgiIG~-G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~-----~~~s~~e~~~~aDiVi~~v~~ 111 (355)
|||.|.|+ |.+|+.+++.|++.|++|++.+|++++.+.+...++. ..+...+++..+|+||.+...
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~ 72 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTEADLDSVDAVVDALSV 72 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCHHHHTTCSEEEECCCC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccCCCceEEecccccccHhhcccCCEEEECCcc
Confidence 78999987 9999999999999999999999999988776544332 111112566788888887643
No 289
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=97.47 E-value=0.00018 Score=64.93 Aligned_cols=103 Identities=19% Similarity=0.188 Sum_probs=68.3
Q ss_pred CCceEEEEcc-cHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhh--cCCEEEEeCCCchHHHHHhc
Q 018506 44 QFESVGFIGL-GNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAE--ASDVVITMLPSSSHVLDVYN 120 (355)
Q Consensus 44 ~~mkIgiIG~-G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~--~aDiVi~~v~~~~~~~~vl~ 120 (355)
+.+||+|+|+ |+||..+++.+.+.|++ .++..+|.+... .-.|..+..+++|+.+ .+|++++++|.. .+.+++.
T Consensus 6 ~~~~VaVvGasG~~G~~~~~~l~~~g~~-~v~~VnP~~~g~-~i~G~~vy~sl~el~~~~~~Dv~Ii~vp~~-~~~~~~~ 82 (288)
T 1oi7_A 6 RETRVLVQGITGREGQFHTKQMLTYGTK-IVAGVTPGKGGM-EVLGVPVYDTVKEAVAHHEVDASIIFVPAP-AAADAAL 82 (288)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCE-EEEEECTTCTTC-EETTEEEESSHHHHHHHSCCSEEEECCCHH-HHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHcCCe-EEEEECCCCCCc-eECCEEeeCCHHHHhhcCCCCEEEEecCHH-HHHHHHH
Confidence 4578999998 99999999999999998 334444443100 1256778889999988 899999999965 5555554
Q ss_pred CCCccccCCCCCCCeEEEEcCCCCHH-HHHHHHHHHh
Q 018506 121 GPNGLLQGGNSVRPQLLIDSSTIDPQ-TSRNISAAVS 156 (355)
Q Consensus 121 ~~~~~l~~~~~~~~~ivi~~st~~~~-~~~~l~~~~~ 156 (355)
.. .+. +-+.++..+++.+. ..+++.+...
T Consensus 83 ea---~~~----Gi~~vVi~t~G~~~~~~~~l~~~a~ 112 (288)
T 1oi7_A 83 EA---AHA----GIPLIVLITEGIPTLDMVRAVEEIK 112 (288)
T ss_dssp HH---HHT----TCSEEEECCSCCCHHHHHHHHHHHH
T ss_pred HH---HHC----CCCEEEEECCCCCHHHHHHHHHHHH
Confidence 32 221 11234445555443 3445555544
No 290
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=97.47 E-value=8.9e-05 Score=64.75 Aligned_cols=68 Identities=15% Similarity=0.102 Sum_probs=53.1
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCC----CCCHH---HH-hhcCCEEEEeCCCch
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPT----KETPF---EV-AEASDVVITMLPSSS 113 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~----~~s~~---e~-~~~aDiVi~~v~~~~ 113 (355)
..++|.|+|+|.+|..+++.|.+.|+ |+++++++++++.+. .++.. .++.+ ++ ++++|.||++++++.
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~ 83 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKKVLR-SGANFVHGDPTRVSDLEKANVRGARAVIVDLESDS 83 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-TTCEEEESCTTCHHHHHHTTCTTCSEEEECCSCHH
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-cCCeEEEcCCCCHHHHHhcCcchhcEEEEcCCCcH
Confidence 34789999999999999999999999 999999999988776 55332 12222 23 568999999998763
No 291
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=97.43 E-value=0.00038 Score=62.19 Aligned_cols=76 Identities=20% Similarity=0.217 Sum_probs=59.9
Q ss_pred CCCceEEEEcccH-HhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHHHHhcC
Q 018506 43 CQFESVGFIGLGN-MGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNG 121 (355)
Q Consensus 43 ~~~mkIgiIG~G~-mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl~~ 121 (355)
..-.++.|||.|. +|.++|..|...|.+|+++++.. .++.+.++++|+||.+++.+. ++..
T Consensus 157 l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t--------------~~L~~~~~~ADIVI~Avg~p~----lI~~ 218 (288)
T 1b0a_A 157 TFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT--------------KNLRHHVENADLLIVAVGKPG----FIPG 218 (288)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC--------------SCHHHHHHHCSEEEECSCCTT----CBCT
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCc--------------hhHHHHhccCCEEEECCCCcC----cCCH
Confidence 3457899999997 69999999999999999998543 578888999999999999763 2221
Q ss_pred CCccccCCCCCCCeEEEEcCCC
Q 018506 122 PNGLLQGGNSVRPQLLIDSSTI 143 (355)
Q Consensus 122 ~~~~l~~~~~~~~~ivi~~st~ 143 (355)
.+++ ++.+|||.+..
T Consensus 219 --~~vk-----~GavVIDVgi~ 233 (288)
T 1b0a_A 219 --DWIK-----EGAIVIDVGIN 233 (288)
T ss_dssp --TTSC-----TTCEEEECCCE
T ss_pred --HHcC-----CCcEEEEccCC
Confidence 2443 56799998764
No 292
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=97.42 E-value=0.0003 Score=64.96 Aligned_cols=70 Identities=20% Similarity=0.327 Sum_probs=49.8
Q ss_pred CceEEEEcccHHhHHHHHHHHHC-CCcE-EEEeCChhHHHHHHh-------------------CCCCCCCCHHHHhhcCC
Q 018506 45 FESVGFIGLGNMGFRMASNLMKA-GYKM-AVHDVNCNVMKMFSD-------------------MGVPTKETPFEVAEASD 103 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~~-G~~V-~v~dr~~~~~~~l~~-------------------~g~~~~~s~~e~~~~aD 103 (355)
|+||||+|+|.||..+++.|.+. +.++ .+.+++++....+.. .++.+..+..++..++|
T Consensus 1 mikVgIiGaG~iG~~l~r~L~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~l~v~~~~~~~~~~vD 80 (337)
T 1cf2_P 1 MKAVAINGYGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDEAD 80 (337)
T ss_dssp CEEEEEECCSTTHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHTCS
T ss_pred CeEEEEEeECHHHHHHHHHHHcCCCcEEEEEEcCChhHHHHhcCCcchhhccccccceeeecCCceEEcCCHHHHhcCCC
Confidence 47999999999999999999874 4565 345777554433222 23333346677778999
Q ss_pred EEEEeCCCchH
Q 018506 104 VVITMLPSSSH 114 (355)
Q Consensus 104 iVi~~v~~~~~ 114 (355)
+||.|+|....
T Consensus 81 vV~~atp~~~~ 91 (337)
T 1cf2_P 81 IVIDCTPEGIG 91 (337)
T ss_dssp EEEECCSTTHH
T ss_pred EEEECCCchhh
Confidence 99999997643
No 293
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=97.41 E-value=0.00034 Score=65.25 Aligned_cols=91 Identities=13% Similarity=0.088 Sum_probs=55.8
Q ss_pred CCCceEEEEc-ccHHhHHHHHHHHHCCC-cEEEEeCChhHHHHHHh-----CCC---C-CCCCHHHHhhcCCEEEEeCCC
Q 018506 43 CQFESVGFIG-LGNMGFRMASNLMKAGY-KMAVHDVNCNVMKMFSD-----MGV---P-TKETPFEVAEASDVVITMLPS 111 (355)
Q Consensus 43 ~~~mkIgiIG-~G~mG~~ia~~L~~~G~-~V~v~dr~~~~~~~l~~-----~g~---~-~~~s~~e~~~~aDiVi~~v~~ 111 (355)
|+++||+|+| .|.+|..+.+.|.+..+ ++...+...+.-.++.+ .+. . ...+ ++..+++|+||+|+|.
T Consensus 14 M~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~~~~~~~~~v~~dl~~~~-~~~~~~vDvVf~atp~ 92 (359)
T 1xyg_A 14 EKDIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFPHLRAQKLPTLVSVK-DADFSTVDAVFCCLPH 92 (359)
T ss_dssp -CCEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHHHCGGGTTSCCCCCBCGG-GCCGGGCSEEEECCCT
T ss_pred ccCcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHHhCchhcCcccccceecc-hhHhcCCCEEEEcCCc
Confidence 4557999999 89999999999998754 66655433222111111 111 1 1112 4445689999999997
Q ss_pred chHHHHHhcCCCccccCCCCCCCeEEEEcCCCC
Q 018506 112 SSHVLDVYNGPNGLLQGGNSVRPQLLIDSSTID 144 (355)
Q Consensus 112 ~~~~~~vl~~~~~~l~~~~~~~~~ivi~~st~~ 144 (355)
....+. ... + + .|..+||.|+..
T Consensus 93 ~~s~~~-a~~---~-~-----aG~~VId~sa~~ 115 (359)
T 1xyg_A 93 GTTQEI-IKE---L-P-----TALKIVDLSADF 115 (359)
T ss_dssp TTHHHH-HHT---S-C-----TTCEEEECSSTT
T ss_pred hhHHHH-HHH---H-h-----CCCEEEECCccc
Confidence 644433 222 2 2 356899998865
No 294
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=97.41 E-value=0.00039 Score=59.44 Aligned_cols=65 Identities=15% Similarity=0.210 Sum_probs=50.6
Q ss_pred ceEEEEc-ccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCC-----CCCCHHHHhhcCCEEEEeCCC
Q 018506 46 ESVGFIG-LGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVP-----TKETPFEVAEASDVVITMLPS 111 (355)
Q Consensus 46 mkIgiIG-~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~-----~~~s~~e~~~~aDiVi~~v~~ 111 (355)
|||.|.| .|.+|+.+++.|+++|++|++.+|++++.+.+. .++. ..+...+++..+|+||.+...
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~ 71 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH-KDINILQKDIFDLTLSDLSDQNVVVDAYGI 71 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC-SSSEEEECCGGGCCHHHHTTCSEEEECCCS
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc-CCCeEEeccccChhhhhhcCCCEEEECCcC
Confidence 7899998 599999999999999999999999998887664 2221 122112667789999988744
No 295
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=97.41 E-value=0.00037 Score=63.41 Aligned_cols=65 Identities=17% Similarity=0.217 Sum_probs=48.4
Q ss_pred ceEEEEc-ccHHhHHHHHHHHHCCC--cEEEEeC--ChhHHHH----HHhC-----CCCCCCCHHHHhhcCCEEEEeCC
Q 018506 46 ESVGFIG-LGNMGFRMASNLMKAGY--KMAVHDV--NCNVMKM----FSDM-----GVPTKETPFEVAEASDVVITMLP 110 (355)
Q Consensus 46 mkIgiIG-~G~mG~~ia~~L~~~G~--~V~v~dr--~~~~~~~----l~~~-----g~~~~~s~~e~~~~aDiVi~~v~ 110 (355)
|||+|+| +|.+|.+++..|+..|+ ++.++|+ ++++++. +.+. ...+..+..++++++|+||++..
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~~~~~a~~~aDvVi~~ag 79 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYEDTAGSDVVVITAG 79 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGGGGTTCSEEEECCC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEeCCHHHhCCCCEEEEcCC
Confidence 7999999 99999999999998886 6899999 8766532 2221 11222133677899999999964
No 296
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=97.40 E-value=0.00047 Score=62.02 Aligned_cols=77 Identities=10% Similarity=0.088 Sum_probs=61.4
Q ss_pred CCCceEEEEcccH-HhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHHHHhcC
Q 018506 43 CQFESVGFIGLGN-MGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNG 121 (355)
Q Consensus 43 ~~~mkIgiIG~G~-mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl~~ 121 (355)
..-.++.|||.|+ +|.++|..|...|.+|++++++ +.++.+.++++|+||.+++.+.. +.
T Consensus 163 l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~--------------t~~L~~~~~~ADIVI~Avg~p~~----I~- 223 (301)
T 1a4i_A 163 IAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSK--------------TAHLDEEVNKGDILVVATGQPEM----VK- 223 (301)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT--------------CSSHHHHHTTCSEEEECCCCTTC----BC-
T ss_pred CCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECC--------------cccHHHHhccCCEEEECCCCccc----CC-
Confidence 3457899999996 7999999999999999999854 35788899999999999988632 21
Q ss_pred CCccccCCCCCCCeEEEEcCCCC
Q 018506 122 PNGLLQGGNSVRPQLLIDSSTID 144 (355)
Q Consensus 122 ~~~~l~~~~~~~~~ivi~~st~~ 144 (355)
..+++ ++.+|||.+...
T Consensus 224 -~~~vk-----~GavVIDVgi~~ 240 (301)
T 1a4i_A 224 -GEWIK-----PGAIVIDCGINY 240 (301)
T ss_dssp -GGGSC-----TTCEEEECCCBC
T ss_pred -HHHcC-----CCcEEEEccCCC
Confidence 12443 567999998865
No 297
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=97.39 E-value=0.0005 Score=61.41 Aligned_cols=76 Identities=12% Similarity=0.144 Sum_probs=59.5
Q ss_pred CCceEEEEcccH-HhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHHHHhcCC
Q 018506 44 QFESVGFIGLGN-MGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNGP 122 (355)
Q Consensus 44 ~~mkIgiIG~G~-mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl~~~ 122 (355)
.-.++.|||.|. +|.+++..|...|.+|++++++ +.++.+.++++|+||.+++.+.. +.
T Consensus 160 ~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~--------------t~~L~~~~~~ADIVI~Avg~p~~----I~-- 219 (285)
T 3l07_A 160 EGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRF--------------TTDLKSHTTKADILIVAVGKPNF----IT-- 219 (285)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT--------------CSSHHHHHTTCSEEEECCCCTTC----BC--
T ss_pred CCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC--------------chhHHHhcccCCEEEECCCCCCC----CC--
Confidence 457899999987 7999999999999999999864 34788899999999999987632 21
Q ss_pred CccccCCCCCCCeEEEEcCCCC
Q 018506 123 NGLLQGGNSVRPQLLIDSSTID 144 (355)
Q Consensus 123 ~~~l~~~~~~~~~ivi~~st~~ 144 (355)
..+++ ++.+|||.+...
T Consensus 220 ~~~vk-----~GavVIDvgi~~ 236 (285)
T 3l07_A 220 ADMVK-----EGAVVIDVGINH 236 (285)
T ss_dssp GGGSC-----TTCEEEECCCEE
T ss_pred HHHcC-----CCcEEEEecccC
Confidence 12443 567899987653
No 298
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=97.38 E-value=0.00077 Score=62.78 Aligned_cols=95 Identities=14% Similarity=0.121 Sum_probs=67.7
Q ss_pred CCCceEEEEcccHHhHHHHHHHHHCCC-cEEEEeCC----hhHH--------HHHHhC-C-CCCCCCHHHHhhcCCEEEE
Q 018506 43 CQFESVGFIGLGNMGFRMASNLMKAGY-KMAVHDVN----CNVM--------KMFSDM-G-VPTKETPFEVAEASDVVIT 107 (355)
Q Consensus 43 ~~~mkIgiIG~G~mG~~ia~~L~~~G~-~V~v~dr~----~~~~--------~~l~~~-g-~~~~~s~~e~~~~aDiVi~ 107 (355)
....||.|+|+|.+|..+++.|...|. +|+++||+ .++. +.+.+. + .....++.|+++.+|++|-
T Consensus 190 l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~~~~~~L~eav~~ADVlIG 269 (388)
T 1vl6_A 190 IEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNPERLSGDLETALEGADFFIG 269 (388)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTTCCCSCHHHHHTTCSEEEE
T ss_pred CCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhccCchhhHHHHHccCCEEEE
Confidence 456899999999999999999999998 79999998 5542 233332 1 2235689999999999988
Q ss_pred eCCCchHHHHHhcCCCccccCCCCCCCeEEEEcCCCCHH
Q 018506 108 MLPSSSHVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQ 146 (355)
Q Consensus 108 ~v~~~~~~~~vl~~~~~~l~~~~~~~~~ivi~~st~~~~ 146 (355)
+.....-.++.+..+ . ++.+|+++|+-.|+
T Consensus 270 ~Sap~l~t~emVk~M-------a--~~pIIfalSNPt~E 299 (388)
T 1vl6_A 270 VSRGNILKPEWIKKM-------S--RKPVIFALANPVPE 299 (388)
T ss_dssp CSCSSCSCHHHHTTS-------C--SSCEEEECCSSSCS
T ss_pred eCCCCccCHHHHHhc-------C--CCCEEEEcCCCCCC
Confidence 764232333444332 1 33499999986654
No 299
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=97.37 E-value=0.00044 Score=61.55 Aligned_cols=76 Identities=13% Similarity=0.152 Sum_probs=59.7
Q ss_pred CCCceEEEEcccHH-hHHHHHHHHHC--CCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHHHHh
Q 018506 43 CQFESVGFIGLGNM-GFRMASNLMKA--GYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVY 119 (355)
Q Consensus 43 ~~~mkIgiIG~G~m-G~~ia~~L~~~--G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl 119 (355)
....++.|||.|.+ |.+++..|... |.+|++++++. .++.+.++++|+||.+++.+.. +
T Consensus 156 l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t--------------~~L~~~~~~ADIVI~Avg~p~~----I 217 (281)
T 2c2x_A 156 IAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGT--------------RDLPALTRQADIVVAAVGVAHL----L 217 (281)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTC--------------SCHHHHHTTCSEEEECSCCTTC----B
T ss_pred CCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECch--------------hHHHHHHhhCCEEEECCCCCcc----c
Confidence 35578999999985 99999999999 88999998653 5788889999999999987632 2
Q ss_pred cCCCccccCCCCCCCeEEEEcCCC
Q 018506 120 NGPNGLLQGGNSVRPQLLIDSSTI 143 (355)
Q Consensus 120 ~~~~~~l~~~~~~~~~ivi~~st~ 143 (355)
. ..+++ ++.+|||.+..
T Consensus 218 ~--~~~vk-----~GavVIDVgi~ 234 (281)
T 2c2x_A 218 T--ADMVR-----PGAAVIDVGVS 234 (281)
T ss_dssp C--GGGSC-----TTCEEEECCEE
T ss_pred C--HHHcC-----CCcEEEEccCC
Confidence 1 12443 46799998764
No 300
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=97.36 E-value=0.00027 Score=64.54 Aligned_cols=69 Identities=7% Similarity=0.009 Sum_probs=53.5
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCC-cEEEEeCC---hhHHHHHHhC-----CC--CC--CCC---HHHHhhcCCEEEE
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGY-KMAVHDVN---CNVMKMFSDM-----GV--PT--KET---PFEVAEASDVVIT 107 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~-~V~v~dr~---~~~~~~l~~~-----g~--~~--~~s---~~e~~~~aDiVi~ 107 (355)
...++.|+|+|.+|.+++..|++.|. +|++++|+ .++++++.+. +. .. .++ +.+.+.++|+||-
T Consensus 153 ~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aDiIIN 232 (315)
T 3tnl_A 153 IGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVIFTN 232 (315)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEEEE
T ss_pred cCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCCEEEE
Confidence 45789999999999999999999998 89999999 8888776541 21 11 122 3456779999999
Q ss_pred eCCCc
Q 018506 108 MLPSS 112 (355)
Q Consensus 108 ~v~~~ 112 (355)
++|..
T Consensus 233 aTp~G 237 (315)
T 3tnl_A 233 ATGVG 237 (315)
T ss_dssp CSSTT
T ss_pred CccCC
Confidence 99853
No 301
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=97.34 E-value=0.00064 Score=60.70 Aligned_cols=77 Identities=17% Similarity=0.248 Sum_probs=60.3
Q ss_pred CCCceEEEEcccH-HhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHHHHhcC
Q 018506 43 CQFESVGFIGLGN-MGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNG 121 (355)
Q Consensus 43 ~~~mkIgiIG~G~-mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl~~ 121 (355)
..-.++.|||.|. +|.++|..|...|.+|++++++ +.++.+.++.+|+||.+++.+.. +.
T Consensus 158 l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~--------------t~~L~~~~~~ADIVI~Avg~p~~----I~- 218 (285)
T 3p2o_A 158 LEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIK--------------TKDLSLYTRQADLIIVAAGCVNL----LR- 218 (285)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT--------------CSCHHHHHTTCSEEEECSSCTTC----BC-
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC--------------chhHHHHhhcCCEEEECCCCCCc----CC-
Confidence 3457899999987 6999999999999999999874 24788899999999999987532 21
Q ss_pred CCccccCCCCCCCeEEEEcCCCC
Q 018506 122 PNGLLQGGNSVRPQLLIDSSTID 144 (355)
Q Consensus 122 ~~~~l~~~~~~~~~ivi~~st~~ 144 (355)
..+++ ++.+|||.+...
T Consensus 219 -~~~vk-----~GavVIDVgi~~ 235 (285)
T 3p2o_A 219 -SDMVK-----EGVIVVDVGINR 235 (285)
T ss_dssp -GGGSC-----TTEEEEECCCEE
T ss_pred -HHHcC-----CCeEEEEeccCc
Confidence 12443 568999987653
No 302
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=97.33 E-value=0.00038 Score=61.52 Aligned_cols=34 Identities=26% Similarity=0.445 Sum_probs=31.6
Q ss_pred CceEEEEcccHHhHHHHHHHHHCCC-cEEEEeCCh
Q 018506 45 FESVGFIGLGNMGFRMASNLMKAGY-KMAVHDVNC 78 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~~G~-~V~v~dr~~ 78 (355)
..+|.|||+|.+|+.++..|+..|. +++++|++.
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 3689999999999999999999997 799999987
No 303
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=97.31 E-value=0.00062 Score=62.69 Aligned_cols=67 Identities=10% Similarity=0.237 Sum_probs=51.4
Q ss_pred CCceEEEEcc-cHHhHHHHHHHHHCCC-------cEEEEeCC----hhHHHH----HHhCC------CCCCCCHHHHhhc
Q 018506 44 QFESVGFIGL-GNMGFRMASNLMKAGY-------KMAVHDVN----CNVMKM----FSDMG------VPTKETPFEVAEA 101 (355)
Q Consensus 44 ~~mkIgiIG~-G~mG~~ia~~L~~~G~-------~V~v~dr~----~~~~~~----l~~~g------~~~~~s~~e~~~~ 101 (355)
+.|||+|+|+ |.+|++++..|...|+ +|.++|++ +++++. +.+.. +...++..+++++
T Consensus 4 ~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~~al~~ 83 (329)
T 1b8p_A 4 TPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMTAFKD 83 (329)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHHHHTTT
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccccCcEEEecCcHHHhCC
Confidence 3589999997 9999999999999885 89999998 554432 33311 1223677889999
Q ss_pred CCEEEEeCC
Q 018506 102 SDVVITMLP 110 (355)
Q Consensus 102 aDiVi~~v~ 110 (355)
+|+||++..
T Consensus 84 aD~Vi~~ag 92 (329)
T 1b8p_A 84 ADVALLVGA 92 (329)
T ss_dssp CSEEEECCC
T ss_pred CCEEEEeCC
Confidence 999999864
No 304
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=97.27 E-value=0.00039 Score=63.83 Aligned_cols=70 Identities=19% Similarity=0.240 Sum_probs=45.2
Q ss_pred CCCceEEEEcccHHhHHHHHHHHHC-------CCcE-EEEeCChhH---------HH-HHHhCC-CCC-CCCHHHHhh--
Q 018506 43 CQFESVGFIGLGNMGFRMASNLMKA-------GYKM-AVHDVNCNV---------MK-MFSDMG-VPT-KETPFEVAE-- 100 (355)
Q Consensus 43 ~~~mkIgiIG~G~mG~~ia~~L~~~-------G~~V-~v~dr~~~~---------~~-~l~~~g-~~~-~~s~~e~~~-- 100 (355)
|+++||+|||+|.||+.+++.|.+. +.+| .++|++++. .. ...+.+ +.. ..+..+++.
T Consensus 2 Mk~irVgIiG~G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~~~~~~~~~idl~~~~~~~~~~g~~~~~~~d~~e~l~~~ 81 (325)
T 3ing_A 2 MKEIRIILMGTGNVGLNVLRIIDASNRRRSAFSIKVVGVSDSRSYASGRNLDISSIISNKEKTGRISDRAFSGPEDLMGE 81 (325)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHHHHHC--CEEEEEEEECSSBEEECSSCCHHHHHHHHHHHSCSCSSBCCSGGGGTTS
T ss_pred CceEEEEEEcCcHHHHHHHHHHHhchhhccCCCEEEEEEEecChhhcccccCHHHHHHHhhhcCCCCcccCCHHHHhcCC
Confidence 4568999999999999999999874 2343 456777542 11 122223 211 115566664
Q ss_pred cCCEEEEeCCCc
Q 018506 101 ASDVVITMLPSS 112 (355)
Q Consensus 101 ~aDiVi~~v~~~ 112 (355)
+.|+|+.|+|..
T Consensus 82 ~iDvVVe~T~~~ 93 (325)
T 3ing_A 82 AADLLVDCTPAS 93 (325)
T ss_dssp CCSEEEECCCCC
T ss_pred CCCEEEECCCCc
Confidence 589999999864
No 305
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=97.27 E-value=0.00028 Score=59.63 Aligned_cols=37 Identities=19% Similarity=0.447 Sum_probs=33.9
Q ss_pred ceEEEEcc-cHHhHHHHHHHHHCCCcEEEEeCChhHHH
Q 018506 46 ESVGFIGL-GNMGFRMASNLMKAGYKMAVHDVNCNVMK 82 (355)
Q Consensus 46 mkIgiIG~-G~mG~~ia~~L~~~G~~V~v~dr~~~~~~ 82 (355)
|+|.|.|+ |.+|..+++.|.+.|++|++.+|++++.+
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~ 41 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLP 41 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcc
Confidence 78999987 99999999999999999999999987643
No 306
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=97.26 E-value=0.00046 Score=62.92 Aligned_cols=69 Identities=9% Similarity=0.145 Sum_probs=53.6
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCC-cEEEEeCC---hhHHHHHHh-----CCCC--C--CCCH---HHHhhcCCEEEE
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGY-KMAVHDVN---CNVMKMFSD-----MGVP--T--KETP---FEVAEASDVVIT 107 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~-~V~v~dr~---~~~~~~l~~-----~g~~--~--~~s~---~e~~~~aDiVi~ 107 (355)
...++.|+|+|.+|.+++..|.+.|. +|++++|+ .++++++.+ .+.. . ..+. .+.+.++|+||-
T Consensus 147 ~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~DiIIN 226 (312)
T 3t4e_A 147 RGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASADILTN 226 (312)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCSEEEE
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCceEEEE
Confidence 44689999999999999999999998 79999999 777777654 1211 1 1233 456778999999
Q ss_pred eCCCc
Q 018506 108 MLPSS 112 (355)
Q Consensus 108 ~v~~~ 112 (355)
++|..
T Consensus 227 aTp~G 231 (312)
T 3t4e_A 227 GTKVG 231 (312)
T ss_dssp CSSTT
T ss_pred CCcCC
Confidence 99864
No 307
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=97.26 E-value=0.00034 Score=63.32 Aligned_cols=103 Identities=16% Similarity=0.211 Sum_probs=69.3
Q ss_pred CCceEEEEcc-cHHhHHHHHHHHHCCCcEEEEeCChhHH-HHHHhCCCCCCCCHHHHhh--cCCEEEEeCCCchHHHHHh
Q 018506 44 QFESVGFIGL-GNMGFRMASNLMKAGYKMAVHDVNCNVM-KMFSDMGVPTKETPFEVAE--ASDVVITMLPSSSHVLDVY 119 (355)
Q Consensus 44 ~~mkIgiIG~-G~mG~~ia~~L~~~G~~V~v~dr~~~~~-~~l~~~g~~~~~s~~e~~~--~aDiVi~~v~~~~~~~~vl 119 (355)
...+|.|+|+ |.||..+++.+.+.|++ .++..+|.+. +.+ .|.....+++|+.+ ..|++++++|.. .+.+++
T Consensus 12 ~~~~v~V~Gasg~~G~~~~~~l~~~g~~-~V~~VnP~~~g~~i--~G~~vy~sl~el~~~~~~Dv~ii~vp~~-~~~~~v 87 (294)
T 2yv1_A 12 ENTKAIVQGITGRQGSFHTKKMLECGTK-IVGGVTPGKGGQNV--HGVPVFDTVKEAVKETDANASVIFVPAP-FAKDAV 87 (294)
T ss_dssp TTCCEEEETTTSHHHHHHHHHHHHTTCC-EEEEECTTCTTCEE--TTEEEESSHHHHHHHHCCCEEEECCCHH-HHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHHhCCCe-EEEEeCCCCCCceE--CCEeeeCCHHHHhhcCCCCEEEEccCHH-HHHHHH
Confidence 3467899998 99999999999999998 5566666542 111 46778889999988 899999999965 555555
Q ss_pred cCCCccccCCCCCCCeEEEEcCCCCH-HHHHHHHHHHhh
Q 018506 120 NGPNGLLQGGNSVRPQLLIDSSTIDP-QTSRNISAAVSN 157 (355)
Q Consensus 120 ~~~~~~l~~~~~~~~~ivi~~st~~~-~~~~~l~~~~~~ 157 (355)
.. .++. +-+.+|..+++.+ ...+++.+...+
T Consensus 88 ~e---a~~~----Gi~~vVi~t~G~~~~~~~~l~~~A~~ 119 (294)
T 2yv1_A 88 FE---AIDA----GIELIVVITEHIPVHDTMEFVNYAED 119 (294)
T ss_dssp HH---HHHT----TCSEEEECCSCCCHHHHHHHHHHHHH
T ss_pred HH---HHHC----CCCEEEEECCCCCHHHHHHHHHHHHH
Confidence 43 2221 1133444555544 344556555543
No 308
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=97.26 E-value=0.00073 Score=64.54 Aligned_cols=67 Identities=22% Similarity=0.426 Sum_probs=52.7
Q ss_pred CCceEEEEcccHHhHHHHHHHHH----------CCCc-EEEEeCChhHHHHHHhCCCCCCCCHHHHhh--cCCEEEEeCC
Q 018506 44 QFESVGFIGLGNMGFRMASNLMK----------AGYK-MAVHDVNCNVMKMFSDMGVPTKETPFEVAE--ASDVVITMLP 110 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~----------~G~~-V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~--~aDiVi~~v~ 110 (355)
+.+||||||+|.||+.++..|.+ .+.+ +.++||++++.+.+. .+...+++.+++++ +.|+|++|+|
T Consensus 9 k~irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~~~~~~~~~-~~~~~~~d~~ell~d~diDvVve~tp 87 (444)
T 3mtj_A 9 KPIHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRNLDKAEALA-GGLPLTTNPFDVVDDPEIDIVVELIG 87 (444)
T ss_dssp SCEEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECSCHHHHHHHH-TTCCEESCTHHHHTCTTCCEEEECCC
T ss_pred CcccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEECCHHHhhhhc-ccCcccCCHHHHhcCCCCCEEEEcCC
Confidence 45789999999999999988764 2344 457799998877663 34667788999886 5799999998
Q ss_pred C
Q 018506 111 S 111 (355)
Q Consensus 111 ~ 111 (355)
.
T Consensus 88 ~ 88 (444)
T 3mtj_A 88 G 88 (444)
T ss_dssp S
T ss_pred C
Confidence 6
No 309
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=97.23 E-value=0.00092 Score=59.66 Aligned_cols=76 Identities=16% Similarity=0.171 Sum_probs=59.7
Q ss_pred CCceEEEEcccH-HhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHHHHhcCC
Q 018506 44 QFESVGFIGLGN-MGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNGP 122 (355)
Q Consensus 44 ~~mkIgiIG~G~-mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl~~~ 122 (355)
.-.++.|||.|. +|.++|..|...|.+|+++++.. .++.+.++++|+||.+++.+.. +.
T Consensus 160 ~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T--------------~~L~~~~~~ADIVI~Avg~p~~----I~-- 219 (286)
T 4a5o_A 160 YGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFT--------------RDLADHVSRADLVVVAAGKPGL----VK-- 219 (286)
T ss_dssp TTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTC--------------SCHHHHHHTCSEEEECCCCTTC----BC--
T ss_pred CCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCC--------------cCHHHHhccCCEEEECCCCCCC----CC--
Confidence 457899999876 89999999999999999998632 4678889999999999987632 21
Q ss_pred CccccCCCCCCCeEEEEcCCCC
Q 018506 123 NGLLQGGNSVRPQLLIDSSTID 144 (355)
Q Consensus 123 ~~~l~~~~~~~~~ivi~~st~~ 144 (355)
..+++ ++.+|||.+...
T Consensus 220 ~~~vk-----~GavVIDvgi~~ 236 (286)
T 4a5o_A 220 GEWIK-----EGAIVIDVGINR 236 (286)
T ss_dssp GGGSC-----TTCEEEECCSCS
T ss_pred HHHcC-----CCeEEEEecccc
Confidence 12443 567999997664
No 310
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=97.22 E-value=0.0013 Score=59.58 Aligned_cols=103 Identities=17% Similarity=0.158 Sum_probs=68.1
Q ss_pred CCceEEEEcc-cHHhHHHHHHHHHCCCcEEEEeCChhHH-HHHHhCCCCCCCCHHHHhh--c-CCEEEEeCCCchHHHHH
Q 018506 44 QFESVGFIGL-GNMGFRMASNLMKAGYKMAVHDVNCNVM-KMFSDMGVPTKETPFEVAE--A-SDVVITMLPSSSHVLDV 118 (355)
Q Consensus 44 ~~mkIgiIG~-G~mG~~ia~~L~~~G~~V~v~dr~~~~~-~~l~~~g~~~~~s~~e~~~--~-aDiVi~~v~~~~~~~~v 118 (355)
...+|.|+|+ |.||..+++.+.+.|++ .++..+|.+. +. -.|.....|++|+.+ . .|++++++|.. .+.++
T Consensus 12 ~~~~vvV~Gasg~~G~~~~~~l~~~g~~-~v~~VnP~~~g~~--i~G~~vy~sl~el~~~~~~~DvaIi~vp~~-~~~~~ 87 (297)
T 2yv2_A 12 SETRVLVQGITGREGSFHAKAMLEYGTK-VVAGVTPGKGGSE--VHGVPVYDSVKEALAEHPEINTSIVFVPAP-FAPDA 87 (297)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCE-EEEEECTTCTTCE--ETTEEEESSHHHHHHHCTTCCEEEECCCGG-GHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHHhCCCc-EEEEeCCCCCCce--ECCEeeeCCHHHHhhcCCCCCEEEEecCHH-HHHHH
Confidence 4567888898 99999999999999998 5555555532 11 147778889999887 5 99999999975 55555
Q ss_pred hcCCCccccCCCCCCCeEEEEcCCCCHH-HHHHHHHHHhh
Q 018506 119 YNGPNGLLQGGNSVRPQLLIDSSTIDPQ-TSRNISAAVSN 157 (355)
Q Consensus 119 l~~~~~~l~~~~~~~~~ivi~~st~~~~-~~~~l~~~~~~ 157 (355)
+.. .++. +-+.+|..+++.++ ..+++.+...+
T Consensus 88 v~e---a~~~----Gi~~vVi~t~G~~~~~~~~l~~~A~~ 120 (297)
T 2yv2_A 88 VYE---AVDA----GIRLVVVITEGIPVHDTMRFVNYARQ 120 (297)
T ss_dssp HHH---HHHT----TCSEEEECCCCCCHHHHHHHHHHHHH
T ss_pred HHH---HHHC----CCCEEEEECCCCCHHHHHHHHHHHHH
Confidence 443 2221 11334445555443 34556555543
No 311
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=97.22 E-value=0.00052 Score=63.36 Aligned_cols=69 Identities=17% Similarity=0.161 Sum_probs=50.2
Q ss_pred CCCceEEEEcc-cHHhHHHHHHHHHCCCcEEEEeCCh----hHHH---HHHhCCCCC-------CCCHHHHhh--cCCEE
Q 018506 43 CQFESVGFIGL-GNMGFRMASNLMKAGYKMAVHDVNC----NVMK---MFSDMGVPT-------KETPFEVAE--ASDVV 105 (355)
Q Consensus 43 ~~~mkIgiIG~-G~mG~~ia~~L~~~G~~V~v~dr~~----~~~~---~l~~~g~~~-------~~s~~e~~~--~aDiV 105 (355)
|.+|+|.|.|+ |.+|+.++..|.+.||+|++.+|++ ++.+ .+...++.. ..++.++++ .+|+|
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~V 87 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIV 87 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEE
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEE
Confidence 45689999987 9999999999999999999999976 4444 233344322 123455677 89999
Q ss_pred EEeCCC
Q 018506 106 ITMLPS 111 (355)
Q Consensus 106 i~~v~~ 111 (355)
|.+...
T Consensus 88 i~~a~~ 93 (346)
T 3i6i_A 88 VSTVGG 93 (346)
T ss_dssp EECCCG
T ss_pred EECCch
Confidence 998754
No 312
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=97.21 E-value=0.00021 Score=64.05 Aligned_cols=67 Identities=13% Similarity=0.217 Sum_probs=46.6
Q ss_pred CCCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHH---hCCCCCCCCHHHHhhc-CCEEEEeC
Q 018506 43 CQFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFS---DMGVPTKETPFEVAEA-SDVVITML 109 (355)
Q Consensus 43 ~~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~---~~g~~~~~s~~e~~~~-aDiVi~~v 109 (355)
|++|||.|.|+|.+|+.++..|.+.||+|++.+|++++...-. ...+.-..+..++++. +|+||-+.
T Consensus 1 M~~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a 71 (286)
T 3gpi_A 1 MSLSKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQPMPAGVQTLIADVTRPDTLASIVHLRPEILVYCV 71 (286)
T ss_dssp -CCCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTSCCCTTCCEEECCTTCGGGCTTGGGGCCSEEEECH
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCccccccCCceEEccCCChHHHHHhhcCCCCEEEEeC
Confidence 3568999999999999999999999999999999876521000 0011111233345555 99999775
No 313
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=97.21 E-value=0.00053 Score=62.60 Aligned_cols=67 Identities=22% Similarity=0.261 Sum_probs=49.1
Q ss_pred ceEEEEc-ccHHhHHHHHHHHHC-C--CcEEEEeCCh---hHHHHHHhCCC--CCC----CCHHHHhhcCCEEEEeCCCc
Q 018506 46 ESVGFIG-LGNMGFRMASNLMKA-G--YKMAVHDVNC---NVMKMFSDMGV--PTK----ETPFEVAEASDVVITMLPSS 112 (355)
Q Consensus 46 mkIgiIG-~G~mG~~ia~~L~~~-G--~~V~v~dr~~---~~~~~l~~~g~--~~~----~s~~e~~~~aDiVi~~v~~~ 112 (355)
|||+||| +|.+|.+++..|... + .++.++|+++ ..+..+.+... ... ++..++++++|+||++...+
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~~~~G~a~Dl~~~~~~~~v~~~~~~~~~~~~~~aDivii~ag~~ 80 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATPALEGADVVLISAGVA 80 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSSTTHHHHHHHHHTSCSSEEEEEECSSCCHHHHTTCSEEEECCSCS
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCCCchhHHHHhhCCCCCceEEEecCCCcHHHhCCCCEEEEeCCCC
Confidence 7999999 899999999999875 4 5799999986 22333443211 111 35678889999999997443
No 314
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=97.21 E-value=0.0046 Score=54.23 Aligned_cols=58 Identities=21% Similarity=0.339 Sum_probs=42.0
Q ss_pred ceEEEEcc-cHHhHHHHHHHHHC-CCcEE-EEeCChhHHHHHHhCCCCCCCCHHHHhh-cCCEEEEeCCCchHHHHHh
Q 018506 46 ESVGFIGL-GNMGFRMASNLMKA-GYKMA-VHDVNCNVMKMFSDMGVPTKETPFEVAE-ASDVVITMLPSSSHVLDVY 119 (355)
Q Consensus 46 mkIgiIG~-G~mG~~ia~~L~~~-G~~V~-v~dr~~~~~~~l~~~g~~~~~s~~e~~~-~aDiVi~~v~~~~~~~~vl 119 (355)
|||+|+|+ |.||+.++..+.+. ++++. ++|++ +++++++. .+|+||-+.+. ..+.+.+
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~---------------~dl~~~~~~~~DvvIDfT~p-~a~~~~~ 62 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAG---------------DPLSLLTDGNTEVVIDFTHP-DVVMGNL 62 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTT---------------CCTHHHHHTTCCEEEECSCT-TTHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccC---------------CCHHHHhccCCcEEEEccCh-HHHHHHH
Confidence 68999996 99999999999865 89876 55664 34555554 79999966533 3444444
No 315
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=97.20 E-value=0.00025 Score=65.82 Aligned_cols=91 Identities=15% Similarity=0.150 Sum_probs=56.5
Q ss_pred CCceEEEEc-ccHHhHHHHHHHHHCC-----C-cEEEEe-C-ChhH-HHH----HHh-CCCCCC-CCHHHHhhcCCEEEE
Q 018506 44 QFESVGFIG-LGNMGFRMASNLMKAG-----Y-KMAVHD-V-NCNV-MKM----FSD-MGVPTK-ETPFEVAEASDVVIT 107 (355)
Q Consensus 44 ~~mkIgiIG-~G~mG~~ia~~L~~~G-----~-~V~v~d-r-~~~~-~~~----l~~-~g~~~~-~s~~e~~~~aDiVi~ 107 (355)
+||||+|+| .|.+|..+.+.|.+.+ + ++..+. + +..+ +.. +.. ...... .+. +.+.++|+||+
T Consensus 8 ~m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~~~~~~-~~~~~~DvVf~ 86 (352)
T 2nqt_A 8 NATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVVEPTEA-AVLGGHDAVFL 86 (352)
T ss_dssp SCEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBCEECCH-HHHTTCSEEEE
T ss_pred cCCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhcccccccceeeeccCCH-HHhcCCCEEEE
Confidence 468999999 9999999999999887 3 566554 2 3222 221 111 112221 133 34568999999
Q ss_pred eCCCchHHHHHhcCCCccccCCCCCCCeEEEEcCCCCH
Q 018506 108 MLPSSSHVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDP 145 (355)
Q Consensus 108 ~v~~~~~~~~vl~~~~~~l~~~~~~~~~ivi~~st~~~ 145 (355)
|++.... +++... + + .|..+||.|+..-
T Consensus 87 alg~~~s-~~~~~~---~-~-----~G~~vIDlSa~~R 114 (352)
T 2nqt_A 87 ALPHGHS-AVLAQQ---L-S-----PETLIIDCGADFR 114 (352)
T ss_dssp CCTTSCC-HHHHHH---S-C-----TTSEEEECSSTTT
T ss_pred CCCCcch-HHHHHH---H-h-----CCCEEEEECCCcc
Confidence 9987532 333322 2 2 3468999988763
No 316
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=97.20 E-value=0.00025 Score=61.16 Aligned_cols=66 Identities=17% Similarity=0.294 Sum_probs=46.9
Q ss_pred CceEEEEc-ccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhC----CCCC--CCCHHHHhhcCCEEEEeCC
Q 018506 45 FESVGFIG-LGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDM----GVPT--KETPFEVAEASDVVITMLP 110 (355)
Q Consensus 45 ~mkIgiIG-~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~----g~~~--~~s~~e~~~~aDiVi~~v~ 110 (355)
||||.|.| .|.+|+.+++.|.+.|++|++.+|++++.+.+... .... ..+..++++++|+||.+..
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~ 76 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENEHLKVKKADVSSLDEVCEVCKGADAVISAFN 76 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCCTTEEEECCCTTCHHHHHHHHTTCSEEEECCC
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhccCceEEEEecCCCHHHHHHHhcCCCEEEEeCc
Confidence 58999998 69999999999999999999999998765433110 0111 1223445667777777653
No 317
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=97.18 E-value=0.00016 Score=65.26 Aligned_cols=94 Identities=12% Similarity=0.026 Sum_probs=62.6
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhC-C----------CCCCCCHHHHhhcCCEEEEeCCCc
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDM-G----------VPTKETPFEVAEASDVVITMLPSS 112 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~-g----------~~~~~s~~e~~~~aDiVi~~v~~~ 112 (355)
..+++.|+|+|.+|.+++..|++.| +|++++|++++++.+.+. + +.. .+..+.+..+|+||.+++..
T Consensus 127 ~~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~-~~~~~~~~~~DilVn~ag~~ 204 (287)
T 1nvt_A 127 KDKNIVIYGAGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKF-SGLDVDLDGVDIIINATPIG 204 (287)
T ss_dssp CSCEEEEECCSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEE-ECTTCCCTTCCEEEECSCTT
T ss_pred CCCEEEEECchHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEE-eeHHHhhCCCCEEEECCCCC
Confidence 4468999999999999999999999 999999999887776531 0 011 12234557899999998764
Q ss_pred hHH--HHHhcCCCccccCCCCCCCeEEEEcCCCC
Q 018506 113 SHV--LDVYNGPNGLLQGGNSVRPQLLIDSSTID 144 (355)
Q Consensus 113 ~~~--~~vl~~~~~~l~~~~~~~~~ivi~~st~~ 144 (355)
..- +.........+ .++.+++|++..+
T Consensus 205 ~~~~~~~~~~~~~~~l-----~~~~~v~Dv~y~p 233 (287)
T 1nvt_A 205 MYPNIDVEPIVKAEKL-----REDMVVMDLIYNP 233 (287)
T ss_dssp CTTCCSSCCSSCSTTC-----CSSSEEEECCCSS
T ss_pred CCCCCCCCCCCCHHHc-----CCCCEEEEeeeCC
Confidence 210 00000001112 2457899998753
No 318
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=97.13 E-value=0.0017 Score=59.98 Aligned_cols=69 Identities=23% Similarity=0.384 Sum_probs=48.3
Q ss_pred CceEEEEcccHHhHHHHHHHHHCC-CcE-EEEeCChhHHHHHHh-CCCC-----------------CCCCHHHHhhcCCE
Q 018506 45 FESVGFIGLGNMGFRMASNLMKAG-YKM-AVHDVNCNVMKMFSD-MGVP-----------------TKETPFEVAEASDV 104 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~~G-~~V-~v~dr~~~~~~~l~~-~g~~-----------------~~~s~~e~~~~aDi 104 (355)
|+||||+|+|.||..+++.|.+.. .++ .+.|++++....+.. .++. ...+.+++.+++|+
T Consensus 1 ~ikVgIiGaG~iG~~~~r~L~~~p~~elvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~~~~v~v~~~~e~l~~~vDv 80 (340)
T 1b7g_O 1 MVNVAVNGYGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSDI 80 (340)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCSE
T ss_pred CeEEEEEecCHHHHHHHHHHHcCCCCEEEEEEcCChHHHHHHHHhcCcceecCcCHHHHhcccccccccCHhHhhcCCCE
Confidence 369999999999999999998753 354 466787665443322 2332 23344555568999
Q ss_pred EEEeCCCch
Q 018506 105 VITMLPSSS 113 (355)
Q Consensus 105 Vi~~v~~~~ 113 (355)
||.|+|...
T Consensus 81 V~~aTp~~~ 89 (340)
T 1b7g_O 81 VVDTTPNGV 89 (340)
T ss_dssp EEECCSTTH
T ss_pred EEECCCCch
Confidence 999998764
No 319
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=97.10 E-value=0.00054 Score=63.17 Aligned_cols=92 Identities=13% Similarity=0.154 Sum_probs=56.9
Q ss_pred CCceEEEEc-ccHHhHHHHHHHHHC-CCcEEEE-eCC----h-hHHHH----HHhC-CCCCCC--CHHHHhhcCCEEEEe
Q 018506 44 QFESVGFIG-LGNMGFRMASNLMKA-GYKMAVH-DVN----C-NVMKM----FSDM-GVPTKE--TPFEVAEASDVVITM 108 (355)
Q Consensus 44 ~~mkIgiIG-~G~mG~~ia~~L~~~-G~~V~v~-dr~----~-~~~~~----l~~~-g~~~~~--s~~e~~~~aDiVi~~ 108 (355)
.|+||+|+| .|.+|..+.+.|.+. .+++..+ .++ . .++.. +... ...+.. +.++..+++|+||+|
T Consensus 3 ~M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~~~~~~~~~~~Dvvf~a 82 (337)
T 3dr3_A 3 AMLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPMSDISEFSPGVDVVFLA 82 (337)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEESSGGGTCTTCSEEEEC
T ss_pred CceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCccceeEeccCCHHHHhcCCCEEEEC
Confidence 468999999 699999999999984 4566655 333 1 12222 2111 122222 344444799999999
Q ss_pred CCCchHHHHHhcCCCccccCCCCCCCeEEEEcCCCC
Q 018506 109 LPSSSHVLDVYNGPNGLLQGGNSVRPQLLIDSSTID 144 (355)
Q Consensus 109 v~~~~~~~~vl~~~~~~l~~~~~~~~~ivi~~st~~ 144 (355)
+|... .++.... +++ .|..+||.|+-.
T Consensus 83 ~p~~~-s~~~~~~---~~~-----~g~~vIDlSa~f 109 (337)
T 3dr3_A 83 TAHEV-SHDLAPQ---FLE-----AGCVVFDLSGAF 109 (337)
T ss_dssp SCHHH-HHHHHHH---HHH-----TTCEEEECSSTT
T ss_pred CChHH-HHHHHHH---HHH-----CCCEEEEcCCcc
Confidence 99753 3333322 232 356899999875
No 320
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=97.08 E-value=0.0008 Score=61.18 Aligned_cols=66 Identities=24% Similarity=0.291 Sum_probs=49.0
Q ss_pred ceEEEEcc-cHHhHHHHHHHHHCCCcEEEEeCChh-HHH---HHHhCCCCC-------CCCHHHHhhcCCEEEEeCCC
Q 018506 46 ESVGFIGL-GNMGFRMASNLMKAGYKMAVHDVNCN-VMK---MFSDMGVPT-------KETPFEVAEASDVVITMLPS 111 (355)
Q Consensus 46 mkIgiIG~-G~mG~~ia~~L~~~G~~V~v~dr~~~-~~~---~l~~~g~~~-------~~s~~e~~~~aDiVi~~v~~ 111 (355)
++|.|.|+ |.+|+.+++.|.+.||+|++.+|+++ +.+ .+...++.. .+++.++++.+|+||.+...
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~~ 89 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISALAF 89 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCG
T ss_pred CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECCch
Confidence 47999985 99999999999999999999999874 333 233344322 12345667889999988753
No 321
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=97.08 E-value=0.0015 Score=60.49 Aligned_cols=65 Identities=23% Similarity=0.209 Sum_probs=50.5
Q ss_pred CCCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhh-cCCEEEEe
Q 018506 43 CQFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAE-ASDVVITM 108 (355)
Q Consensus 43 ~~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~-~aDiVi~~ 108 (355)
..-.+|+|+|.|++|..+++.|...|.+|+++|+++++.+...+.++... +.++++. +||+++-|
T Consensus 173 L~GktV~I~G~GnVG~~~A~~l~~~GakVvvsD~~~~~~~~a~~~ga~~v-~~~ell~~~~DIliP~ 238 (355)
T 1c1d_A 173 LDGLTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGHTAV-ALEDVLSTPCDVFAPC 238 (355)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEEC-CGGGGGGCCCSEEEEC
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHhcCCEEe-ChHHhhcCccceecHh
Confidence 35578999999999999999999999999999999876222233455444 5567666 89998865
No 322
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=97.05 E-value=0.001 Score=61.59 Aligned_cols=90 Identities=13% Similarity=0.128 Sum_probs=55.0
Q ss_pred CCceEEEEc-ccHHhHHHHHHHHHCCC-cEEEEeCChhHHHHHHh--------CCCCCCCCHHHHhhcCCEEEEeCCCch
Q 018506 44 QFESVGFIG-LGNMGFRMASNLMKAGY-KMAVHDVNCNVMKMFSD--------MGVPTKETPFEVAEASDVVITMLPSSS 113 (355)
Q Consensus 44 ~~mkIgiIG-~G~mG~~ia~~L~~~G~-~V~v~dr~~~~~~~l~~--------~g~~~~~s~~e~~~~aDiVi~~v~~~~ 113 (355)
+++||+|+| .|.+|..+.+.|.+..+ ++....+..+.-.++.+ .... ..+.++ +.++|+||+|+|...
T Consensus 3 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~~~~~~g~~~~~-~~~~~~-~~~vDvV~~a~g~~~ 80 (345)
T 2ozp_A 3 GKKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFVHPNLRGRTNLK-FVPPEK-LEPADILVLALPHGV 80 (345)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGTCGGGTTTCCCB-CBCGGG-CCCCSEEEECCCTTH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHhCchhcCccccc-ccchhH-hcCCCEEEEcCCcHH
Confidence 358999999 69999999999997654 66655443222112211 1111 223334 478999999999864
Q ss_pred HHHHHhcCCCccccCCCCCCCeEEEEcCCCC
Q 018506 114 HVLDVYNGPNGLLQGGNSVRPQLLIDSSTID 144 (355)
Q Consensus 114 ~~~~vl~~~~~~l~~~~~~~~~ivi~~st~~ 144 (355)
. .+.... +++ .|..+||.|+..
T Consensus 81 s-~~~a~~---~~~-----aG~~VId~Sa~~ 102 (345)
T 2ozp_A 81 F-AREFDR---YSA-----LAPVLVDLSADF 102 (345)
T ss_dssp H-HHTHHH---HHT-----TCSEEEECSSTT
T ss_pred H-HHHHHH---HHH-----CCCEEEEcCccc
Confidence 3 332221 232 345789988854
No 323
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=97.02 E-value=0.00019 Score=66.06 Aligned_cols=71 Identities=13% Similarity=0.229 Sum_probs=50.6
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCC---------CcE-EEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCch
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAG---------YKM-AVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSS 113 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G---------~~V-~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~ 113 (355)
+++||||||+|.||+.+++.|.+.. .+| .++||++++.+.+. ....++|.++++ +.|+|+.|+|+..
T Consensus 2 k~irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~~~--~~~~~~d~~~ll-~iDvVve~t~~~~ 78 (332)
T 2ejw_A 2 EALKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRDPRKPRAIP--QELLRAEPFDLL-EADLVVEAMGGVE 78 (332)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSCTTSCCSSC--GGGEESSCCCCT-TCSEEEECCCCSH
T ss_pred CeeEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECCHHHhhccC--cccccCCHHHHh-CCCEEEECCCCcH
Confidence 3579999999999999999998763 343 57788876533221 112456777777 8999999999764
Q ss_pred HHHH
Q 018506 114 HVLD 117 (355)
Q Consensus 114 ~~~~ 117 (355)
...+
T Consensus 79 ~a~~ 82 (332)
T 2ejw_A 79 APLR 82 (332)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 3333
No 324
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=97.00 E-value=0.0004 Score=67.16 Aligned_cols=64 Identities=17% Similarity=0.325 Sum_probs=46.5
Q ss_pred ceEEEEcccHHhHH--HHHHHHHC------CCcEEEEeCChhHHHHHH--------hCC----CCCCCCHHHHhhcCCEE
Q 018506 46 ESVGFIGLGNMGFR--MASNLMKA------GYKMAVHDVNCNVMKMFS--------DMG----VPTKETPFEVAEASDVV 105 (355)
Q Consensus 46 mkIgiIG~G~mG~~--ia~~L~~~------G~~V~v~dr~~~~~~~l~--------~~g----~~~~~s~~e~~~~aDiV 105 (355)
|||+|||+|..|.+ +...++.. +.+|+++|+++++++... ..+ +..+++..+++++||+|
T Consensus 1 mKI~iIGaGs~~~t~~l~~~~~~~~~l~~~~~ei~L~Di~~~rl~~~~~~~~~~~~~~~~~~~i~~t~d~~eAl~gAD~V 80 (477)
T 3u95_A 1 MKISIVGAGSVRFALQLVEDIAQTDELSREDTHIYLMDVHERRLNASYILARKYVEELNSPVKVVKTESLDEAIEGADFI 80 (477)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTCTTTCSTTCEEEEECSCHHHHHHHHHHHHHHHHHHTCCCEEEEESCHHHHHTTCSEE
T ss_pred CEEEEECCCchhhHHHHHHHHHhhHhcCCCCCEEEEECCCHHHHHHHHHHHHHHHHHcCCCeEEEEeCCHHHHhCCCCEE
Confidence 79999999998755 33334432 247999999998875422 112 34467889999999999
Q ss_pred EEeC
Q 018506 106 ITML 109 (355)
Q Consensus 106 i~~v 109 (355)
|++.
T Consensus 81 i~~~ 84 (477)
T 3u95_A 81 INTA 84 (477)
T ss_dssp EECC
T ss_pred EECc
Confidence 9986
No 325
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=96.99 E-value=0.0012 Score=59.63 Aligned_cols=67 Identities=21% Similarity=0.275 Sum_probs=49.2
Q ss_pred CceEEEEcc-cHHhHHHHHHHHHCCCcEEEEeCCh------hHHHH---HHhCCCCC-----C--CCHHHHhhcCCEEEE
Q 018506 45 FESVGFIGL-GNMGFRMASNLMKAGYKMAVHDVNC------NVMKM---FSDMGVPT-----K--ETPFEVAEASDVVIT 107 (355)
Q Consensus 45 ~mkIgiIG~-G~mG~~ia~~L~~~G~~V~v~dr~~------~~~~~---l~~~g~~~-----~--~s~~e~~~~aDiVi~ 107 (355)
+|+|.|.|+ |.+|+.+++.|++.||+|++.+|++ ++.+. +...++.. . .++.++++.+|+||.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~ 83 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVIS 83 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCEEEE
Confidence 578999986 9999999999999999999999973 34332 22334321 1 234556778999998
Q ss_pred eCCC
Q 018506 108 MLPS 111 (355)
Q Consensus 108 ~v~~ 111 (355)
+...
T Consensus 84 ~a~~ 87 (308)
T 1qyc_A 84 TVGS 87 (308)
T ss_dssp CCCG
T ss_pred CCcc
Confidence 8754
No 326
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=96.99 E-value=0.0033 Score=60.42 Aligned_cols=65 Identities=22% Similarity=0.234 Sum_probs=50.8
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCCh----hHHHHHHhCCCCCC--CCHHHHhhc-CCEEEEe
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNC----NVMKMFSDMGVPTK--ETPFEVAEA-SDVVITM 108 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~----~~~~~l~~~g~~~~--~s~~e~~~~-aDiVi~~ 108 (355)
+.+||.|||+|..|.+.|+.|.+.|++|+++|+++ ...+.+.+.|+.+. ..+.+...+ +|+||++
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~gi~~~~g~~~~~~~~~~~d~vv~s 79 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKVVCGSHPLELLDEDFCYMIKN 79 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTTCEEEESCCCGGGGGSCEEEEEEC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCCCEEEECCChHHhhcCCCCEEEEC
Confidence 45789999999999999999999999999999854 34566777776543 233445566 8999987
No 327
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=96.97 E-value=0.00041 Score=59.52 Aligned_cols=37 Identities=14% Similarity=0.274 Sum_probs=33.9
Q ss_pred ceEEEEc-ccHHhHHHHHHHHHCCCcEEEEeCChhHHH
Q 018506 46 ESVGFIG-LGNMGFRMASNLMKAGYKMAVHDVNCNVMK 82 (355)
Q Consensus 46 mkIgiIG-~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~ 82 (355)
|||.|.| .|.+|..+++.|++.|++|++.+|++++.+
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~ 38 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVP 38 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSC
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchh
Confidence 6899998 899999999999999999999999987654
No 328
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=96.97 E-value=0.00066 Score=63.16 Aligned_cols=68 Identities=13% Similarity=0.231 Sum_probs=50.7
Q ss_pred CCCCceEEEEc-ccHHhHHHHHHHHHC-CCcEEEEeCChhHHHHHHh-CCC-----CCC---CCHHHHhhcCCEEEEeC
Q 018506 42 SCQFESVGFIG-LGNMGFRMASNLMKA-GYKMAVHDVNCNVMKMFSD-MGV-----PTK---ETPFEVAEASDVVITML 109 (355)
Q Consensus 42 ~~~~mkIgiIG-~G~mG~~ia~~L~~~-G~~V~v~dr~~~~~~~l~~-~g~-----~~~---~s~~e~~~~aDiVi~~v 109 (355)
.+++|+|.|.| .|.+|+.++..|.+. ||+|++.+|++++...+.. .++ ... .+..++++++|+||-+.
T Consensus 21 ~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vih~A 99 (372)
T 3slg_A 21 SMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVKKCDVILPLV 99 (372)
T ss_dssp --CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHHHCSEEEECB
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhccCCEEEEcC
Confidence 35678999998 699999999999998 9999999999877666543 221 222 23445677899999764
No 329
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=96.94 E-value=0.00083 Score=62.49 Aligned_cols=90 Identities=17% Similarity=0.213 Sum_probs=54.5
Q ss_pred CceEEEEc-ccHHhHHHHHHHHHCC-CcEEEEeCChh----HHHHHHhC-----------CCCCC-CCHHHHhh-cCCEE
Q 018506 45 FESVGFIG-LGNMGFRMASNLMKAG-YKMAVHDVNCN----VMKMFSDM-----------GVPTK-ETPFEVAE-ASDVV 105 (355)
Q Consensus 45 ~mkIgiIG-~G~mG~~ia~~L~~~G-~~V~v~dr~~~----~~~~l~~~-----------g~~~~-~s~~e~~~-~aDiV 105 (355)
++||+|+| .|.+|..+++.|.+.. ++|....+++. .+...... ..... .+++++.+ ++|+|
T Consensus 8 ~~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvV 87 (354)
T 1ys4_A 8 KIKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGKKYKDACYWFQDRDIPENIKDMVVIPTDPKHEEFEDVDIV 87 (354)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHHTCBCEESCTTSGGGTTCCEE
T ss_pred cceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccccccHHHhcccccccccccCceeeEEEeCCHHHHhcCCCCEE
Confidence 37999999 8999999999998764 46765543221 12211110 11111 24455556 89999
Q ss_pred EEeCCCchHHHHHhcCCCccccCCCCCCCeEEEEcCCC
Q 018506 106 ITMLPSSSHVLDVYNGPNGLLQGGNSVRPQLLIDSSTI 143 (355)
Q Consensus 106 i~~v~~~~~~~~vl~~~~~~l~~~~~~~~~ivi~~st~ 143 (355)
|+|+|... ..+.... +++ .|..|||.++.
T Consensus 88 ~~atp~~~-~~~~a~~---~~~-----aG~~VId~s~~ 116 (354)
T 1ys4_A 88 FSALPSDL-AKKFEPE---FAK-----EGKLIFSNASA 116 (354)
T ss_dssp EECCCHHH-HHHHHHH---HHH-----TTCEEEECCST
T ss_pred EECCCchH-HHHHHHH---HHH-----CCCEEEECCch
Confidence 99998753 3333322 232 34578898875
No 330
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=96.92 E-value=0.0002 Score=61.40 Aligned_cols=74 Identities=19% Similarity=0.272 Sum_probs=51.1
Q ss_pred CCceEEEEcccHHhHHHHHHH--HHCCCcE-EEEeCChh-HHHH-HHhCCCCC--CCCHHHHhh--cCCEEEEeCCCchH
Q 018506 44 QFESVGFIGLGNMGFRMASNL--MKAGYKM-AVHDVNCN-VMKM-FSDMGVPT--KETPFEVAE--ASDVVITMLPSSSH 114 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L--~~~G~~V-~v~dr~~~-~~~~-l~~~g~~~--~~s~~e~~~--~aDiVi~~v~~~~~ 114 (355)
+..+++|+|+|++|.++++.+ .+.|+++ .++|.+|+ +... .. .|+.+ .+++++.++ +.|++++|+|+. .
T Consensus 83 ~~~~V~IvGaG~lG~aLa~~~~~~~~g~~iVg~~D~dp~~kiG~~~i-~GvpV~~~~dL~~~v~~~~Id~vIIAvPs~-~ 160 (212)
T 3keo_A 83 STTNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDLDSNDLVGKTTE-DGIPVYGISTINDHLIDSDIETAILTVPST-E 160 (212)
T ss_dssp SCEEEEEECCSHHHHHHTTCCCCTTSSEEEEEEEECTTSTTTTCBCT-TCCBEEEGGGHHHHC-CCSCCEEEECSCGG-G
T ss_pred CCCEEEEECcCHHHHHHHHhhhcccCCeEEEEEEeCCchhccCceeE-CCeEEeCHHHHHHHHHHcCCCEEEEecCch-h
Confidence 456899999999999999984 4556764 56799988 6644 22 24433 356666665 489999999975 3
Q ss_pred HHHHh
Q 018506 115 VLDVY 119 (355)
Q Consensus 115 ~~~vl 119 (355)
.+++.
T Consensus 161 aq~v~ 165 (212)
T 3keo_A 161 AQEVA 165 (212)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 34443
No 331
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=96.89 E-value=0.0015 Score=59.03 Aligned_cols=67 Identities=21% Similarity=0.291 Sum_probs=49.8
Q ss_pred CceEEEEc-ccHHhHHHHHHHHHCCCcEEEEeCC-----hhHHHHH---HhCCCCC-----C--CCHHHHhhcCCEEEEe
Q 018506 45 FESVGFIG-LGNMGFRMASNLMKAGYKMAVHDVN-----CNVMKMF---SDMGVPT-----K--ETPFEVAEASDVVITM 108 (355)
Q Consensus 45 ~mkIgiIG-~G~mG~~ia~~L~~~G~~V~v~dr~-----~~~~~~l---~~~g~~~-----~--~s~~e~~~~aDiVi~~ 108 (355)
+|+|.|.| .|.+|+.++..|.+.|++|++.+|+ +++.+.+ ...++.. . .++.++++.+|+||.+
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~ 83 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISA 83 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEEC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCCEEEEC
Confidence 57899998 5999999999999999999999998 4454433 2334321 1 2345667889999988
Q ss_pred CCC
Q 018506 109 LPS 111 (355)
Q Consensus 109 v~~ 111 (355)
...
T Consensus 84 a~~ 86 (313)
T 1qyd_A 84 LAG 86 (313)
T ss_dssp CCC
T ss_pred Ccc
Confidence 753
No 332
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=96.89 E-value=0.0013 Score=59.27 Aligned_cols=67 Identities=19% Similarity=0.224 Sum_probs=50.3
Q ss_pred CceEEEEcc-cHHhHHHHHHHHHCCCcEEEEeCCh-------hHHHHH---HhCCCCC-----C--CCHHHHhhcCCEEE
Q 018506 45 FESVGFIGL-GNMGFRMASNLMKAGYKMAVHDVNC-------NVMKMF---SDMGVPT-----K--ETPFEVAEASDVVI 106 (355)
Q Consensus 45 ~mkIgiIG~-G~mG~~ia~~L~~~G~~V~v~dr~~-------~~~~~l---~~~g~~~-----~--~s~~e~~~~aDiVi 106 (355)
+|+|.|.|+ |.+|+.+++.|++.||+|++.+|++ ++.+.+ ...++.. . .++.++++.+|+||
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi 81 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIVI 81 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCEEE
Confidence 578999986 9999999999999999999999986 554433 2344321 1 23456677899999
Q ss_pred EeCCC
Q 018506 107 TMLPS 111 (355)
Q Consensus 107 ~~v~~ 111 (355)
.+...
T Consensus 82 ~~a~~ 86 (307)
T 2gas_A 82 CAAGR 86 (307)
T ss_dssp ECSSS
T ss_pred ECCcc
Confidence 88754
No 333
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=96.88 E-value=0.0059 Score=56.37 Aligned_cols=69 Identities=23% Similarity=0.380 Sum_probs=47.1
Q ss_pred CceEEEEcccHHhHHHHHHHHHC-CCcEE-EEeCChhHHHH---------------------HHhCCCCCCCCHHHHhhc
Q 018506 45 FESVGFIGLGNMGFRMASNLMKA-GYKMA-VHDVNCNVMKM---------------------FSDMGVPTKETPFEVAEA 101 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~~-G~~V~-v~dr~~~~~~~---------------------l~~~g~~~~~s~~e~~~~ 101 (355)
|+||||+|+|.+|..+++.|.+. +.+|. +.|++++.... +.+.++.+..+..+...+
T Consensus 2 mikVgI~G~G~IGr~v~r~l~~~~~~evvaV~d~~~~~~~~l~~~dg~s~~g~~~~~~~v~~~~~~~l~v~~~~~~~~~~ 81 (343)
T 2yyy_A 2 PAKVLINGYGSIGKRVADAVSMQDDMEVIGVTKTKPDFEARLAVEKGYKLFVAIPDNERVKLFEDAGIPVEGTILDIIED 81 (343)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSCCHHHHHHHHHTTCCCCCBGGGTGGG
T ss_pred ceEEEEECCCHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhcCCccccccCCCceeecccCCeEEECCchHHhccC
Confidence 46999999999999999999876 46654 44555444322 222333333445555568
Q ss_pred CCEEEEeCCCch
Q 018506 102 SDVVITMLPSSS 113 (355)
Q Consensus 102 aDiVi~~v~~~~ 113 (355)
+|+||.|.|...
T Consensus 82 vDiV~eatg~~~ 93 (343)
T 2yyy_A 82 ADIVVDGAPKKI 93 (343)
T ss_dssp CSEEEECCCTTH
T ss_pred CCEEEECCCccc
Confidence 999999998753
No 334
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=96.87 E-value=0.00016 Score=62.10 Aligned_cols=69 Identities=10% Similarity=0.137 Sum_probs=49.2
Q ss_pred CCceEEEEcccHHhHHHHHHHHH-CCCcE-EEEeCChhHHHHHHh-CCCCCCCCHHHHhh-cCCEEEEeCCCc
Q 018506 44 QFESVGFIGLGNMGFRMASNLMK-AGYKM-AVHDVNCNVMKMFSD-MGVPTKETPFEVAE-ASDVVITMLPSS 112 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~-~G~~V-~v~dr~~~~~~~l~~-~g~~~~~s~~e~~~-~aDiVi~~v~~~ 112 (355)
..++|+|||+|++|..+++.+.. .|+++ .++|.++++...... ..+...+++.+.++ +.|+|++|+|..
T Consensus 79 ~~~rV~IIGaG~~G~~la~~~~~~~g~~iVg~~D~dp~k~g~~i~gv~V~~~~dl~ell~~~ID~ViIA~Ps~ 151 (211)
T 2dt5_A 79 RKWGLCIVGMGRLGSALADYPGFGESFELRGFFDVDPEKVGRPVRGGVIEHVDLLPQRVPGRIEIALLTVPRE 151 (211)
T ss_dssp SCEEEEEECCSHHHHHHHHCSCCCSSEEEEEEEESCTTTTTCEETTEEEEEGGGHHHHSTTTCCEEEECSCHH
T ss_pred CCCEEEEECccHHHHHHHHhHhhcCCcEEEEEEeCCHHHHhhhhcCCeeecHHhHHHHHHcCCCEEEEeCCch
Confidence 44789999999999999996322 26664 567999888654332 12223567777765 589999999965
No 335
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=96.86 E-value=0.0011 Score=60.78 Aligned_cols=67 Identities=13% Similarity=0.104 Sum_probs=49.6
Q ss_pred CCceEEEEc-ccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCC-----CC--CCHHHHhhcCCEEEEeCC
Q 018506 44 QFESVGFIG-LGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVP-----TK--ETPFEVAEASDVVITMLP 110 (355)
Q Consensus 44 ~~mkIgiIG-~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~-----~~--~s~~e~~~~aDiVi~~v~ 110 (355)
.+|+|.|.| .|.+|+.+++.|++.||+|++.+|++++.+.+.+.++. .. .+..++++.+|+||-+..
T Consensus 12 ~~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~ 86 (342)
T 2x4g_A 12 AHVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERALRGLDGVIFSAG 86 (342)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGGGCCEEEECCTTCHHHHHHHTTTCSEEEEC--
T ss_pred cCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhccCCeEEEEecCCCHHHHHHHHcCCCEEEECCc
Confidence 457999998 59999999999999999999999988766555432321 11 234456778999998763
No 336
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=96.86 E-value=0.0023 Score=55.65 Aligned_cols=67 Identities=9% Similarity=0.058 Sum_probs=48.8
Q ss_pred CCCceEEEEc-ccHHhHHHHHHHHHC--CCcEEEEeCChhHHHHHHhCCCC-----CC--CCHHHHhhcCCEEEEeCC
Q 018506 43 CQFESVGFIG-LGNMGFRMASNLMKA--GYKMAVHDVNCNVMKMFSDMGVP-----TK--ETPFEVAEASDVVITMLP 110 (355)
Q Consensus 43 ~~~mkIgiIG-~G~mG~~ia~~L~~~--G~~V~v~dr~~~~~~~l~~~g~~-----~~--~s~~e~~~~aDiVi~~v~ 110 (355)
+.+|+|.|.| .|.+|..+++.|++. |++|++.+|++++.+.+. .++. .. .+..++++..|+||.+..
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~ 78 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIG-GEADVFIGDITDADSINPAFQGIDALVILTS 78 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHTT-CCTTEEECCTTSHHHHHHHHTTCSEEEECCC
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhcC-CCeeEEEecCCCHHHHHHHHcCCCEEEEecc
Confidence 3567899997 699999999999999 899999999988776542 1221 11 233455667788777654
No 337
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=96.86 E-value=0.0011 Score=59.30 Aligned_cols=65 Identities=14% Similarity=0.129 Sum_probs=49.3
Q ss_pred ceEEEEc-ccHHhHHHHHHHHHC-CCcEEEEeCChhHHHHHHhCCCCC-------CCCHHHHhhcCCEEEEeCC
Q 018506 46 ESVGFIG-LGNMGFRMASNLMKA-GYKMAVHDVNCNVMKMFSDMGVPT-------KETPFEVAEASDVVITMLP 110 (355)
Q Consensus 46 mkIgiIG-~G~mG~~ia~~L~~~-G~~V~v~dr~~~~~~~l~~~g~~~-------~~s~~e~~~~aDiVi~~v~ 110 (355)
|||.|.| .|.+|+.++..|.+. |++|.+.+|++++...+...++.. ..+..++++.+|+||.+..
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~ 74 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPS 74 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTBEEEECCTTCHHHHHHHTTTCSEEEECCC
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCC
Confidence 6899998 599999999999998 999999999998776554443221 1234456677888887754
No 338
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=96.83 E-value=0.00053 Score=63.23 Aligned_cols=67 Identities=15% Similarity=0.068 Sum_probs=52.9
Q ss_pred CceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCC----CCCHH---HH-hhcCCEEEEeCCCch
Q 018506 45 FESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPT----KETPF---EV-AEASDVVITMLPSSS 113 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~----~~s~~---e~-~~~aDiVi~~v~~~~ 113 (355)
.++|-|+|.|.+|..+++.|.+.|+ |++.|+++++++ +.+.+... .++.+ ++ ++++|.+++++++++
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~~~d~ 189 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKK-VLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLESDS 189 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHHTTCEEEESCTTSHHHHHHTCSTTEEEEEECCSSHH
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHhCCcEEEEeCCCCHHHHHhcChhhccEEEEcCCccH
Confidence 4689999999999999999999999 999999999998 77665432 12222 23 467899999998763
No 339
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=96.82 E-value=0.0018 Score=58.83 Aligned_cols=68 Identities=22% Similarity=0.269 Sum_probs=49.9
Q ss_pred CCceEEEEcc-cHHhHHHHHHHHHCCCcEEEEeCCh------hHHHHH---HhCCCCC-------CCCHHHHhhcCCEEE
Q 018506 44 QFESVGFIGL-GNMGFRMASNLMKAGYKMAVHDVNC------NVMKMF---SDMGVPT-------KETPFEVAEASDVVI 106 (355)
Q Consensus 44 ~~mkIgiIG~-G~mG~~ia~~L~~~G~~V~v~dr~~------~~~~~l---~~~g~~~-------~~s~~e~~~~aDiVi 106 (355)
+||+|.|.|+ |.+|+.+++.|++.||+|.+.+|++ ++.+.+ ...++.. .+++.++++.+|+||
T Consensus 3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~vi 82 (321)
T 3c1o_A 3 HMEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIVI 82 (321)
T ss_dssp -CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred cccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCEEE
Confidence 4578999985 9999999999999999999999986 343332 3334321 123556778899999
Q ss_pred EeCCC
Q 018506 107 TMLPS 111 (355)
Q Consensus 107 ~~v~~ 111 (355)
.+...
T Consensus 83 ~~a~~ 87 (321)
T 3c1o_A 83 SALPF 87 (321)
T ss_dssp ECCCG
T ss_pred ECCCc
Confidence 88753
No 340
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=96.79 E-value=0.0024 Score=58.57 Aligned_cols=69 Identities=20% Similarity=0.313 Sum_probs=48.7
Q ss_pred CceEEEEcccHHhHHHHHHHHHC---------CCcE-EEEeCChhHHHH------HHh--CCCCCCC--CHHHHhh--cC
Q 018506 45 FESVGFIGLGNMGFRMASNLMKA---------GYKM-AVHDVNCNVMKM------FSD--MGVPTKE--TPFEVAE--AS 102 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~~---------G~~V-~v~dr~~~~~~~------l~~--~g~~~~~--s~~e~~~--~a 102 (355)
|+||||||+|.||+.+++.|.+. +.+| .++|+++++.+. +.. ......+ +.+++++ +.
T Consensus 2 mirvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~id~~~~~~~~~~~~~~~~~~d~~~ll~~~~i 81 (327)
T 3do5_A 2 MIKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGDFSLVEALRMKRETGMLRDDAKAIEVVRSADY 81 (327)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEEESSCCHHHHHHHHHHHSSCSBCCCHHHHHHHSCC
T ss_pred cEEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHhccccCHHHHHhhhccCccccCCCCHHHHhcCCCC
Confidence 68999999999999999999875 4454 466887554221 111 1123444 8888885 58
Q ss_pred CEEEEeCCCch
Q 018506 103 DVVITMLPSSS 113 (355)
Q Consensus 103 DiVi~~v~~~~ 113 (355)
|+|+.|+|+..
T Consensus 82 DvVv~~tp~~~ 92 (327)
T 3do5_A 82 DVLIEASVTRV 92 (327)
T ss_dssp SEEEECCCCC-
T ss_pred CEEEECCCCcc
Confidence 99999999763
No 341
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=96.74 E-value=0.0043 Score=56.59 Aligned_cols=42 Identities=17% Similarity=0.193 Sum_probs=36.5
Q ss_pred CCCceEEEEcc-cHHhHHHHHHHHHCCCcEEEEeCChhHHHHH
Q 018506 43 CQFESVGFIGL-GNMGFRMASNLMKAGYKMAVHDVNCNVMKMF 84 (355)
Q Consensus 43 ~~~mkIgiIG~-G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l 84 (355)
++.|+|.|.|+ |.+|+.++..|++.||+|++.+|++++.+.+
T Consensus 9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~ 51 (342)
T 1y1p_A 9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANL 51 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHH
Confidence 45578999986 9999999999999999999999998776544
No 342
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=96.73 E-value=0.0019 Score=58.44 Aligned_cols=64 Identities=13% Similarity=0.152 Sum_probs=47.0
Q ss_pred CceEEEEc-ccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHh-----CCCCCCCCHHHHhhcCCEEEEeCC
Q 018506 45 FESVGFIG-LGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSD-----MGVPTKETPFEVAEASDVVITMLP 110 (355)
Q Consensus 45 ~mkIgiIG-~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~-----~g~~~~~s~~e~~~~aDiVi~~v~ 110 (355)
+|+|.|.| .|.+|+.++..|.+.|++|++.+|+++..+ +.. ..+. ..+..++++.+|+||-+..
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~Dl~-~~~~~~~~~~~d~Vih~a~ 71 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-INDYEYRVSDYT-LEDLINQLNDVDAVVHLAA 71 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC------CCEEEECCCC-HHHHHHHTTTCSEEEECCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-CCceEEEEcccc-HHHHHHhhcCCCEEEEccc
Confidence 47899998 699999999999999999999999865544 321 1223 3445667788999998753
No 343
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=96.71 E-value=0.0019 Score=59.27 Aligned_cols=65 Identities=11% Similarity=0.229 Sum_probs=47.7
Q ss_pred CceEEEEcc-cHHhHHHHHHHHHCCC-------cEEEEeCCh--hHHH----HHHhCCC------CCCCCHHHHhhcCCE
Q 018506 45 FESVGFIGL-GNMGFRMASNLMKAGY-------KMAVHDVNC--NVMK----MFSDMGV------PTKETPFEVAEASDV 104 (355)
Q Consensus 45 ~mkIgiIG~-G~mG~~ia~~L~~~G~-------~V~v~dr~~--~~~~----~l~~~g~------~~~~s~~e~~~~aDi 104 (355)
.|||.|+|+ |.+|+.++..|.+.|+ +|.++|+.+ ++.+ .+.+... ....+..++++++|+
T Consensus 4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~~di~~~~~~~~a~~~~D~ 83 (327)
T 1y7t_A 4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVAFKDADY 83 (327)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTCSE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcccccccCCeEeccChHHHhCCCCE
Confidence 379999996 9999999999999986 899999874 2222 2322111 112466778889999
Q ss_pred EEEeC
Q 018506 105 VITML 109 (355)
Q Consensus 105 Vi~~v 109 (355)
||.+.
T Consensus 84 Vih~A 88 (327)
T 1y7t_A 84 ALLVG 88 (327)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 99885
No 344
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=96.70 E-value=0.0016 Score=59.26 Aligned_cols=103 Identities=16% Similarity=0.188 Sum_probs=69.0
Q ss_pred CceEEEE-cc-cHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhh--cCCEEEEeCCCchHHHHHhc
Q 018506 45 FESVGFI-GL-GNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAE--ASDVVITMLPSSSHVLDVYN 120 (355)
Q Consensus 45 ~mkIgiI-G~-G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~--~aDiVi~~v~~~~~~~~vl~ 120 (355)
..+|+|| |+ |++|...++.|.+.|++ .+|+.+|.+... .-.|..+..+++|+.+ ..|++++++|.. .+.+++.
T Consensus 13 ~~siaVV~Gasg~~G~~~~~~l~~~G~~-~v~~VnP~~~g~-~i~G~~vy~sl~el~~~~~vD~avI~vP~~-~~~~~~~ 89 (305)
T 2fp4_A 13 KNTKVICQGFTGKQGTFHSQQALEYGTN-LVGGTTPGKGGK-THLGLPVFNTVKEAKEQTGATASVIYVPPP-FAAAAIN 89 (305)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCE-EEEEECTTCTTC-EETTEEEESSHHHHHHHHCCCEEEECCCHH-HHHHHHH
T ss_pred CCcEEEEECCCCCHHHHHHHHHHHCCCc-EEEEeCCCcCcc-eECCeeeechHHHhhhcCCCCEEEEecCHH-HHHHHHH
Confidence 3568999 98 99999999999999999 455666653210 0256777889999988 899999999975 5556555
Q ss_pred CCCccccCCCCCCCeEEEEcCCCCH-HHHHHHHHHHhh
Q 018506 121 GPNGLLQGGNSVRPQLLIDSSTIDP-QTSRNISAAVSN 157 (355)
Q Consensus 121 ~~~~~l~~~~~~~~~ivi~~st~~~-~~~~~l~~~~~~ 157 (355)
+. ++.. . +.++..+.+.+ ...+++.+...+
T Consensus 90 e~---i~~G--i--~~iv~~t~G~~~~~~~~l~~~a~~ 120 (305)
T 2fp4_A 90 EA---IDAE--V--PLVVCITEGIPQQDMVRVKHRLLR 120 (305)
T ss_dssp HH---HHTT--C--SEEEECCCCCCHHHHHHHHHHHTT
T ss_pred HH---HHCC--C--CEEEEECCCCChHHHHHHHHHHHh
Confidence 42 2211 1 24455565544 333456555543
No 345
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=96.70 E-value=0.0028 Score=58.53 Aligned_cols=67 Identities=13% Similarity=0.260 Sum_probs=50.0
Q ss_pred CCCceEEEEcc-cHHhHHHHHHHHHCCC-------cEEEEeCChhH--H----HHHHhC------CCCCCCCHHHHhhcC
Q 018506 43 CQFESVGFIGL-GNMGFRMASNLMKAGY-------KMAVHDVNCNV--M----KMFSDM------GVPTKETPFEVAEAS 102 (355)
Q Consensus 43 ~~~mkIgiIG~-G~mG~~ia~~L~~~G~-------~V~v~dr~~~~--~----~~l~~~------g~~~~~s~~e~~~~a 102 (355)
++.-||+|+|+ |.+|.+++-.|+.... ++.+||+.+.. + .++... .....+++.++++++
T Consensus 22 ~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~~~~~a~~~a 101 (345)
T 4h7p_A 22 MSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTADPRVAFDGV 101 (345)
T ss_dssp CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEESCHHHHTTTC
T ss_pred CCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEcCChHHHhCCC
Confidence 44569999996 9999999999987643 79999987642 1 233332 123456788899999
Q ss_pred CEEEEeC
Q 018506 103 DVVITML 109 (355)
Q Consensus 103 DiVi~~v 109 (355)
|+||++-
T Consensus 102 dvVvi~a 108 (345)
T 4h7p_A 102 AIAIMCG 108 (345)
T ss_dssp SEEEECC
T ss_pred CEEEECC
Confidence 9999985
No 346
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=96.70 E-value=0.0028 Score=60.12 Aligned_cols=67 Identities=16% Similarity=0.124 Sum_probs=45.6
Q ss_pred CceEEEEcccHH-hHHHHHHHHH--C---CCcEEEEeCChhHHHHHHh-------C--CCCCCCCHHHHhhcCCEEEEeC
Q 018506 45 FESVGFIGLGNM-GFRMASNLMK--A---GYKMAVHDVNCNVMKMFSD-------M--GVPTKETPFEVAEASDVVITML 109 (355)
Q Consensus 45 ~mkIgiIG~G~m-G~~ia~~L~~--~---G~~V~v~dr~~~~~~~l~~-------~--g~~~~~s~~e~~~~aDiVi~~v 109 (355)
+|||+|||+|.. +..+...|+. . +.+|.++|+++++++...+ . .+..+++..+++++||+||++.
T Consensus 2 ~~KI~IIGaG~v~~~~l~~~l~~~~~~l~~~el~L~Di~~~~~~~~~~~~~~~~~~~~~v~~t~d~~~al~~AD~Viita 81 (417)
T 1up7_A 2 HMRIAVIGGGSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLISDTFEGAVVDAKYVIFQF 81 (417)
T ss_dssp CCEEEEETTTCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEEECSSHHHHHTTCSEEEECC
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcccCCCcCEEEEEeCCHHHHHHHHHHHHHHhhCCeEEEEeCCHHHHhCCCCEEEEcC
Confidence 589999999985 2222334454 2 5689999999988654221 1 1223457778899999999998
Q ss_pred CC
Q 018506 110 PS 111 (355)
Q Consensus 110 ~~ 111 (355)
-.
T Consensus 82 gv 83 (417)
T 1up7_A 82 RP 83 (417)
T ss_dssp CT
T ss_pred CC
Confidence 43
No 347
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=96.63 E-value=0.0024 Score=59.70 Aligned_cols=67 Identities=18% Similarity=0.157 Sum_probs=47.4
Q ss_pred CCCceEEEEcc-cHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCC-----CC--CCHHHHhhcCCEEEEeC
Q 018506 43 CQFESVGFIGL-GNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVP-----TK--ETPFEVAEASDVVITML 109 (355)
Q Consensus 43 ~~~mkIgiIG~-G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~-----~~--~s~~e~~~~aDiVi~~v 109 (355)
..+|+|.|.|+ |.+|+.++..|++.||+|++.+|+++........++. .. .+..++++.+|+||-+.
T Consensus 27 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~A 101 (379)
T 2c5a_A 27 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLA 101 (379)
T ss_dssp TSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHTTCSEEEECC
T ss_pred ccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhccCCceEEECCCCCHHHHHHHhCCCCEEEECc
Confidence 35689999987 9999999999999999999999987653322212211 11 12345566788888775
No 348
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=96.60 E-value=0.0016 Score=59.51 Aligned_cols=64 Identities=23% Similarity=0.269 Sum_probs=47.1
Q ss_pred ceEEEEcc-cHHhHHHHHHHHHCCC--cEEEEeC--ChhHHHH----HHh----C--CCCCCC---CHHHHhhcCCEEEE
Q 018506 46 ESVGFIGL-GNMGFRMASNLMKAGY--KMAVHDV--NCNVMKM----FSD----M--GVPTKE---TPFEVAEASDVVIT 107 (355)
Q Consensus 46 mkIgiIG~-G~mG~~ia~~L~~~G~--~V~v~dr--~~~~~~~----l~~----~--g~~~~~---s~~e~~~~aDiVi~ 107 (355)
|||.|+|+ |.+|++++..|...|+ ++.++|+ ++++++. +.+ . ...... +..++++++|+||.
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~l~~al~gaD~Vi~ 80 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRIIDESDVVII 80 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGGGTTCSEEEE
T ss_pred CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCCcchHHHhCCCCEEEE
Confidence 69999999 9999999999998885 6889999 7654432 222 1 112211 24778899999999
Q ss_pred eC
Q 018506 108 ML 109 (355)
Q Consensus 108 ~v 109 (355)
+.
T Consensus 81 ~A 82 (313)
T 1hye_A 81 TS 82 (313)
T ss_dssp CC
T ss_pred CC
Confidence 86
No 349
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=96.59 E-value=0.0014 Score=51.05 Aligned_cols=72 Identities=14% Similarity=0.144 Sum_probs=56.4
Q ss_pred CCceEEEEcc----cHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHHHHh
Q 018506 44 QFESVGFIGL----GNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVY 119 (355)
Q Consensus 44 ~~mkIgiIG~----G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl 119 (355)
...+|+|||+ +.+|..+.++|.+.||+|+-+|...+.+ .|.....|+.|+-. .|++++++|. +.+.+++
T Consensus 3 ~p~siAVVGaS~~~~~~g~~v~~~L~~~g~~V~pVnP~~~~i-----~G~~~y~sl~dlp~-vDlavi~~p~-~~v~~~v 75 (122)
T 3ff4_A 3 AMKKTLILGATPETNRYAYLAAERLKSHGHEFIPVGRKKGEV-----LGKTIINERPVIEG-VDTVTLYINP-QNQLSEY 75 (122)
T ss_dssp CCCCEEEETCCSCTTSHHHHHHHHHHHHTCCEEEESSSCSEE-----TTEECBCSCCCCTT-CCEEEECSCH-HHHGGGH
T ss_pred CCCEEEEEccCCCCCCHHHHHHHHHHHCCCeEEEECCCCCcC-----CCeeccCChHHCCC-CCEEEEEeCH-HHHHHHH
Confidence 3467999998 5799999999999999999888754322 46667778888777 9999999986 4767766
Q ss_pred cCC
Q 018506 120 NGP 122 (355)
Q Consensus 120 ~~~ 122 (355)
++.
T Consensus 76 ~e~ 78 (122)
T 3ff4_A 76 NYI 78 (122)
T ss_dssp HHH
T ss_pred HHH
Confidence 653
No 350
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=96.59 E-value=0.0039 Score=56.07 Aligned_cols=43 Identities=16% Similarity=0.214 Sum_probs=37.7
Q ss_pred CCceEEEEc-ccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHh
Q 018506 44 QFESVGFIG-LGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSD 86 (355)
Q Consensus 44 ~~mkIgiIG-~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~ 86 (355)
..+++-|+| .|.+|.+++..|++.|++|++++|++++.+++.+
T Consensus 118 ~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~ 161 (287)
T 1lu9_A 118 KGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAAD 161 (287)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHH
Confidence 346789999 9999999999999999999999999988776653
No 351
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=96.54 E-value=0.0024 Score=58.83 Aligned_cols=65 Identities=17% Similarity=0.185 Sum_probs=49.1
Q ss_pred CceEEEEc-ccHHhHHHHHHHHHCCC--c-----EEEEeCCh--hHH----HHHHhCC------CCCCCCHHHHhhcCCE
Q 018506 45 FESVGFIG-LGNMGFRMASNLMKAGY--K-----MAVHDVNC--NVM----KMFSDMG------VPTKETPFEVAEASDV 104 (355)
Q Consensus 45 ~mkIgiIG-~G~mG~~ia~~L~~~G~--~-----V~v~dr~~--~~~----~~l~~~g------~~~~~s~~e~~~~aDi 104 (355)
.+||+|+| +|.+|..++..|+..|. + +.++|+++ +++ ..+.+.. ....++..++++++|+
T Consensus 3 ~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~~~~~~~~~~~~~~daDv 82 (333)
T 5mdh_A 3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEEIAFKDLDV 82 (333)
T ss_dssp CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCHHHHTTTCSE
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcccCCEEEcCCcHHHhCCCCE
Confidence 37999999 79999999999998876 5 99999974 232 3344321 2234567788999999
Q ss_pred EEEeC
Q 018506 105 VITML 109 (355)
Q Consensus 105 Vi~~v 109 (355)
||++.
T Consensus 83 VvitA 87 (333)
T 5mdh_A 83 AILVG 87 (333)
T ss_dssp EEECC
T ss_pred EEEeC
Confidence 99985
No 352
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=96.53 E-value=0.007 Score=52.27 Aligned_cols=73 Identities=15% Similarity=0.132 Sum_probs=52.1
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChh-HHHHHHhCC-CCC---CCCHHHHhhcCCEEEEeCCCchHHHHH
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCN-VMKMFSDMG-VPT---KETPFEVAEASDVVITMLPSSSHVLDV 118 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~-~~~~l~~~g-~~~---~~s~~e~~~~aDiVi~~v~~~~~~~~v 118 (355)
..++|-|||.|.+|..-++.|.+.|.+|++++++.. .++.+.+.+ +.. .-. .+.+.++|+||.++.++ .+...
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~~~~i~~i~~~~~-~~dL~~adLVIaAT~d~-~~N~~ 107 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTVSAEINEWEAKGQLRVKRKKVG-EEDLLNVFFIVVATNDQ-AVNKF 107 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHHTTSCEEECSCCC-GGGSSSCSEEEECCCCT-HHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHcCCcEEEECCCC-HhHhCCCCEEEECCCCH-HHHHH
Confidence 457899999999999999999999999999987643 355555433 221 112 23456899999888665 44433
No 353
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=96.52 E-value=0.0093 Score=54.87 Aligned_cols=70 Identities=16% Similarity=0.247 Sum_probs=46.8
Q ss_pred CceEEEEcccHHhHHHHHHHHHC-CCcEE-EEeC--ChhHHHHHHhC----C-C--------------------CCCCCH
Q 018506 45 FESVGFIGLGNMGFRMASNLMKA-GYKMA-VHDV--NCNVMKMFSDM----G-V--------------------PTKETP 95 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~~-G~~V~-v~dr--~~~~~~~l~~~----g-~--------------------~~~~s~ 95 (355)
++||||+|+|.+|..+++.|.+. +.+|. +.|+ +++.+..+.+. | . ....++
T Consensus 3 ~ikVgI~G~G~iGr~~~R~l~~~~~vevvaI~d~~~~~~~~a~l~~~ds~~g~~~~~~~~~~~~l~v~g~~i~v~~~~d~ 82 (335)
T 1u8f_O 3 KVKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQERDP 82 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSG
T ss_pred ceEEEEEccCHHHHHHHHHHHcCCCcEEEEecCCCCCHHHHHHHhhcccccCCCCCceEEcCCeEEECCeEEEEEecCCH
Confidence 46999999999999999998875 45655 5564 66666555431 0 0 011245
Q ss_pred HHH-h--hcCCEEEEeCCCchH
Q 018506 96 FEV-A--EASDVVITMLPSSSH 114 (355)
Q Consensus 96 ~e~-~--~~aDiVi~~v~~~~~ 114 (355)
+++ . .++|+||.|+|....
T Consensus 83 ~~l~~~~~~vDvV~eatg~~~~ 104 (335)
T 1u8f_O 83 SKIKWGDAGAEYVVESTGVFTT 104 (335)
T ss_dssp GGCCTTTTTCCEEEECSSSCCS
T ss_pred HHCccccCCCCEEEECCCchhh
Confidence 554 1 478999999987644
No 354
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=96.50 E-value=0.0046 Score=55.49 Aligned_cols=66 Identities=18% Similarity=0.116 Sum_probs=50.0
Q ss_pred CceEEEEcc-cHHhHHHHHHHHHCC-CcEEEEeCChhHH--HHHHhCCCCC-----C--CCHHHHhhcCCEEEEeCC
Q 018506 45 FESVGFIGL-GNMGFRMASNLMKAG-YKMAVHDVNCNVM--KMFSDMGVPT-----K--ETPFEVAEASDVVITMLP 110 (355)
Q Consensus 45 ~mkIgiIG~-G~mG~~ia~~L~~~G-~~V~v~dr~~~~~--~~l~~~g~~~-----~--~s~~e~~~~aDiVi~~v~ 110 (355)
+|+|.|.|+ |.+|+.+++.|.+.| ++|.+.+|++++. +.+...++.. . .+..++++.+|+||.+..
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~ 81 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGAYATFIVTN 81 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCC
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEeCC
Confidence 478999987 999999999999998 9999999987764 3344444321 1 234456788999998874
No 355
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=96.49 E-value=0.00063 Score=62.80 Aligned_cols=91 Identities=12% Similarity=0.011 Sum_probs=52.5
Q ss_pred CCceEEEEc-ccHHhHHHHHHHHHCC---CcEEEEe-C-ChhHHHHHHhCCCCCCC-CHHHHhhcCCEEEEeCCCchHHH
Q 018506 44 QFESVGFIG-LGNMGFRMASNLMKAG---YKMAVHD-V-NCNVMKMFSDMGVPTKE-TPFEVAEASDVVITMLPSSSHVL 116 (355)
Q Consensus 44 ~~mkIgiIG-~G~mG~~ia~~L~~~G---~~V~v~d-r-~~~~~~~l~~~g~~~~~-s~~e~~~~aDiVi~~v~~~~~~~ 116 (355)
+++||+|+| .|.+|..+.+.|.+++ +++..++ + +..+.-.+....+.... ++ +..+++|+||.|+|.... .
T Consensus 2 ~~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~~~~~~~~~i~~~~~~~-~~~~~vDvVf~a~g~~~s-~ 79 (336)
T 2r00_A 2 QQFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGKTYRFNGKTVRVQNVEE-FDWSQVHIALFSAGGELS-A 79 (336)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTCEEEETTEEEEEEEGGG-CCGGGCSEEEECSCHHHH-H
T ss_pred CccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCCceeecCceeEEecCCh-HHhcCCCEEEECCCchHH-H
Confidence 468999999 9999999999999874 3555444 2 22110001111111111 12 234689999999986533 2
Q ss_pred HHhcCCCccccCCCCCCCeEEEEcCCCC
Q 018506 117 DVYNGPNGLLQGGNSVRPQLLIDSSTID 144 (355)
Q Consensus 117 ~vl~~~~~~l~~~~~~~~~ivi~~st~~ 144 (355)
+.... +++ .|..+||.|+..
T Consensus 80 ~~a~~---~~~-----~G~~vId~s~~~ 99 (336)
T 2r00_A 80 KWAPI---AAE-----AGVVVIDNTSHF 99 (336)
T ss_dssp HHHHH---HHH-----TTCEEEECSSTT
T ss_pred HHHHH---HHH-----cCCEEEEcCCcc
Confidence 32221 232 345788887753
No 356
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=96.47 E-value=0.0021 Score=60.10 Aligned_cols=35 Identities=34% Similarity=0.425 Sum_probs=32.5
Q ss_pred CceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChh
Q 018506 45 FESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCN 79 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~ 79 (355)
.|||.|||+|..|..+|..|+++|++|++++|+++
T Consensus 1 sm~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~ 35 (412)
T 4hb9_A 1 SMHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSA 35 (412)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCS
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 38999999999999999999999999999998654
No 357
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=96.47 E-value=0.0018 Score=60.19 Aligned_cols=55 Identities=16% Similarity=0.231 Sum_probs=36.9
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCC----CcE-EEEeCChhHHHHHHhC--CCCCCCCHHHHhhc
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAG----YKM-AVHDVNCNVMKMFSDM--GVPTKETPFEVAEA 101 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G----~~V-~v~dr~~~~~~~l~~~--g~~~~~s~~e~~~~ 101 (355)
+++||||||+|.||+.++..|.+.. .+| .++|++.. .+.+. |+..+++..+++++
T Consensus 3 k~i~vgIiG~G~VG~~~~~~l~~~~~g~~~~vvaV~d~~~~---~~~~~~~gi~~~~~~~e~l~~ 64 (358)
T 1ebf_A 3 KVVNVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEAERS---LISKDFSPLNVGSDWKAALAA 64 (358)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECSSBE---EECSSCSCCSCTTCHHHHHHT
T ss_pred ceEEEEEEecCHHHHHHHHHHHhcCCCCCEEEEEEEECChh---hhccccCCCCccccHHHHHhc
Confidence 4589999999999999999999863 344 45575432 22233 45444566666654
No 358
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=96.45 E-value=0.0054 Score=54.05 Aligned_cols=34 Identities=32% Similarity=0.363 Sum_probs=30.5
Q ss_pred CceEEEEcccHHhHHHHHHHHHCCC-cEEEEeCCh
Q 018506 45 FESVGFIGLGNMGFRMASNLMKAGY-KMAVHDVNC 78 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~~G~-~V~v~dr~~ 78 (355)
..+|.|||+|.+|+.++..|+..|. +++++|.+.
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDD 62 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 4689999999999999999999997 689998764
No 359
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=96.41 E-value=0.0026 Score=56.71 Aligned_cols=65 Identities=17% Similarity=0.208 Sum_probs=47.7
Q ss_pred ceEEEEcc-cHHhHHHHHHHHHC--CCcEEEEeCChhHHHHHHhCCCCC-----C--CCHHHHhhcCCEEEEeCC
Q 018506 46 ESVGFIGL-GNMGFRMASNLMKA--GYKMAVHDVNCNVMKMFSDMGVPT-----K--ETPFEVAEASDVVITMLP 110 (355)
Q Consensus 46 mkIgiIG~-G~mG~~ia~~L~~~--G~~V~v~dr~~~~~~~l~~~g~~~-----~--~s~~e~~~~aDiVi~~v~ 110 (355)
|+|.|.|+ |.+|+.++..|.+. ||+|++.+|++++.+.+...++.. . .+..++++.+|+||-+..
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~ 75 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQKAFAGVSKLLFISG 75 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECCC
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCCeEEEeccCCHHHHHHHHhcCCEEEEcCC
Confidence 57899986 99999999999998 999999999988776655443321 1 123445567787776653
No 360
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=96.41 E-value=0.0035 Score=57.63 Aligned_cols=69 Identities=19% Similarity=0.286 Sum_probs=48.8
Q ss_pred CCceEEEEcccHHhHHHHHHHHHC------C--CcE-EEEeCChhHHHH------HH----hCCCC-CCC---CHHHHh-
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKA------G--YKM-AVHDVNCNVMKM------FS----DMGVP-TKE---TPFEVA- 99 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~------G--~~V-~v~dr~~~~~~~------l~----~~g~~-~~~---s~~e~~- 99 (355)
+++||||||+|.||+.++..|.+. | .+| .++||++++.+. +. ..++. .++ +.++++
T Consensus 5 ~~irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ll~ 84 (331)
T 3c8m_A 5 KTINLSIFGLGNVGLNLLRIIRSFNEENRLGLKFNVVFVADSLHSYYNERIDIGKVISYKEKGSLDSLEYESISASEALA 84 (331)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECSSCEEECTTCCHHHHHHHHHTTCGGGCCSEECCHHHHHH
T ss_pred cEEeEEEEecCHHHHHHHHHHHhChHHHhcCCcEEEEEEEECChHHhhcccChHHHhhhhccCCcccccCCCCCHHHHhC
Confidence 457899999999999999999874 2 454 577888765433 11 12221 344 788876
Q ss_pred hcCCEEEEeCCCc
Q 018506 100 EASDVVITMLPSS 112 (355)
Q Consensus 100 ~~aDiVi~~v~~~ 112 (355)
.+.|+|+.|+|..
T Consensus 85 ~~iDvVv~~t~~~ 97 (331)
T 3c8m_A 85 RDFDIVVDATPAS 97 (331)
T ss_dssp SSCSEEEECSCCC
T ss_pred CCCCEEEECCCCC
Confidence 3689999999984
No 361
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=96.40 E-value=0.016 Score=49.91 Aligned_cols=66 Identities=9% Similarity=0.048 Sum_probs=47.4
Q ss_pred eEEEE-cccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHHHHhcCC
Q 018506 47 SVGFI-GLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNGP 122 (355)
Q Consensus 47 kIgiI-G~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl~~~ 122 (355)
+|-|. |.|.+|.++++.|++.|++|++.+|++++.+.+.+.- -.....+..=+.+.+.++.++...
T Consensus 3 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~v~~~~~~~ 69 (230)
T 3guy_A 3 LIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL----------SNNVGYRARDLASHQEVEQLFEQL 69 (230)
T ss_dssp CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC----------SSCCCEEECCTTCHHHHHHHHHSC
T ss_pred EEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH----------hhccCeEeecCCCHHHHHHHHHHH
Confidence 35555 5689999999999999999999999999888776531 112333444456666777776654
No 362
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=96.38 E-value=0.0048 Score=54.92 Aligned_cols=68 Identities=25% Similarity=0.263 Sum_probs=51.6
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCC-cEEEEeCChhHHHHHHhC-----CCCCCCCHHHHhhcCCEEEEeCCC
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGY-KMAVHDVNCNVMKMFSDM-----GVPTKETPFEVAEASDVVITMLPS 111 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~-~V~v~dr~~~~~~~l~~~-----g~~~~~s~~e~~~~aDiVi~~v~~ 111 (355)
...++.|+|+|..+++++..|.+.|. +|+++||+.++++.+.+. .........+..+++|+||-++|-
T Consensus 124 ~~~~~lilGaGGaarai~~aL~~~g~~~i~i~nRt~~ra~~la~~~~~~~~~~~~~~~~~~~~~~dliiNaTp~ 197 (269)
T 3tum_A 124 AGKRALVIGCGGVGSAIAYALAEAGIASITLCDPSTARMGAVCELLGNGFPGLTVSTQFSGLEDFDLVANASPV 197 (269)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHHCTTCEEESCCSCSTTCSEEEECSST
T ss_pred ccCeEEEEecHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHHHHhccCCcceehhhhhhhhcccccccCCcc
Confidence 34679999999999999999999996 799999999998887652 111112222334678999999874
No 363
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=96.31 E-value=0.0016 Score=56.53 Aligned_cols=38 Identities=21% Similarity=0.289 Sum_probs=33.2
Q ss_pred CCceEEEEc-ccHHhHHHHHHHHHCCC--cEEEEeCChhHH
Q 018506 44 QFESVGFIG-LGNMGFRMASNLMKAGY--KMAVHDVNCNVM 81 (355)
Q Consensus 44 ~~mkIgiIG-~G~mG~~ia~~L~~~G~--~V~v~dr~~~~~ 81 (355)
..|+|.|.| .|.+|..+++.|++.|+ +|++.+|++++.
T Consensus 17 ~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~ 57 (242)
T 2bka_A 17 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTF 57 (242)
T ss_dssp TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCC
T ss_pred cCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCc
Confidence 447899998 69999999999999999 999999987643
No 364
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=96.29 E-value=0.0014 Score=60.57 Aligned_cols=90 Identities=10% Similarity=0.042 Sum_probs=51.2
Q ss_pred CceEEEEc-ccHHhHHHHHHHHHCCCc---EEEE-eCC-hhHHHHHHhCCCCCCC-CHHHHhhcCCEEEEeCCCchHHHH
Q 018506 45 FESVGFIG-LGNMGFRMASNLMKAGYK---MAVH-DVN-CNVMKMFSDMGVPTKE-TPFEVAEASDVVITMLPSSSHVLD 117 (355)
Q Consensus 45 ~mkIgiIG-~G~mG~~ia~~L~~~G~~---V~v~-dr~-~~~~~~l~~~g~~~~~-s~~e~~~~aDiVi~~v~~~~~~~~ 117 (355)
+|||+|+| .|.+|..+.+.|.+++|+ +... +++ ..+.-.+....+...+ ++ +.++++|+||.|+|... ..+
T Consensus 6 ~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~~~~~~g~~i~~~~~~~-~~~~~~DvV~~a~g~~~-s~~ 83 (340)
T 2hjs_A 6 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFAESSLRVGDVDS-FDFSSVGLAFFAAAAEV-SRA 83 (340)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEETTEEEECEEGGG-CCGGGCSEEEECSCHHH-HHH
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCccccCCcceEEecCCH-HHhcCCCEEEEcCCcHH-HHH
Confidence 47999999 799999999999977664 4444 432 2110001110111111 22 22568999999998643 233
Q ss_pred HhcCCCccccCCCCCCCeEEEEcCCCC
Q 018506 118 VYNGPNGLLQGGNSVRPQLLIDSSTID 144 (355)
Q Consensus 118 vl~~~~~~l~~~~~~~~~ivi~~st~~ 144 (355)
.... +++ .|..+||.|...
T Consensus 84 ~a~~---~~~-----aG~kvId~Sa~~ 102 (340)
T 2hjs_A 84 HAER---ARA-----AGCSVIDLSGAL 102 (340)
T ss_dssp HHHH---HHH-----TTCEEEETTCTT
T ss_pred HHHH---HHH-----CCCEEEEeCCCC
Confidence 2221 222 244678877654
No 365
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=96.28 E-value=0.0039 Score=57.78 Aligned_cols=90 Identities=17% Similarity=0.232 Sum_probs=52.5
Q ss_pred CCceEEEEc-ccHHhHHHHHHHHHCC-CcEEEEe-CChhH---HHHHH-----------hCCCCCCC-CHHHHhhcCCEE
Q 018506 44 QFESVGFIG-LGNMGFRMASNLMKAG-YKMAVHD-VNCNV---MKMFS-----------DMGVPTKE-TPFEVAEASDVV 105 (355)
Q Consensus 44 ~~mkIgiIG-~G~mG~~ia~~L~~~G-~~V~v~d-r~~~~---~~~l~-----------~~g~~~~~-s~~e~~~~aDiV 105 (355)
+++||+|+| .|.+|..+.+.|.+.. .++.... .+... ..... .......+ ++++ ++++|+|
T Consensus 3 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~vDvV 81 (350)
T 2ep5_A 3 DKIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKIGKKYKDAVKWIEQGDIPEEVQDLPIVSTNYED-HKDVDVV 81 (350)
T ss_dssp CCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGTTSBHHHHCCCCSSSSCCHHHHTCBEECSSGGG-GTTCSEE
T ss_pred CCcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhcCCCHHHhcCcccccccccCCceeEEeeCCHHH-hcCCCEE
Confidence 468999999 8999999999998754 3565553 22111 21110 00111211 3334 3789999
Q ss_pred EEeCCCchHHHHHhcCCCccccCCCCCCCeEEEEcCCC
Q 018506 106 ITMLPSSSHVLDVYNGPNGLLQGGNSVRPQLLIDSSTI 143 (355)
Q Consensus 106 i~~v~~~~~~~~vl~~~~~~l~~~~~~~~~ivi~~st~ 143 (355)
|+|+|.... .+.... +++ .|..|||.|+.
T Consensus 82 f~atp~~~s-~~~a~~---~~~-----aG~~VId~s~~ 110 (350)
T 2ep5_A 82 LSALPNELA-ESIELE---LVK-----NGKIVVSNASP 110 (350)
T ss_dssp EECCCHHHH-HHHHHH---HHH-----TTCEEEECSST
T ss_pred EECCChHHH-HHHHHH---HHH-----CCCEEEECCcc
Confidence 999986533 232221 332 34568888865
No 366
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=96.28 E-value=0.0026 Score=62.16 Aligned_cols=63 Identities=13% Similarity=0.088 Sum_probs=48.7
Q ss_pred CceEEEEc-ccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCC
Q 018506 45 FESVGFIG-LGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLP 110 (355)
Q Consensus 45 ~mkIgiIG-~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~ 110 (355)
+|||.|.| .|.+|+.++..|.+.||+|++.+|++.+.+.+. ....+...++++.+|+||-+..
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~~v~---~d~~~~~~~~l~~~D~Vih~A~ 210 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPGKRF---WDPLNPASDLLDGADVLVHLAG 210 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTTCEE---CCTTSCCTTTTTTCSEEEECCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCcccee---ecccchhHHhcCCCCEEEECCC
Confidence 78999998 699999999999999999999999877543211 1222344566778999998754
No 367
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=96.28 E-value=0.0078 Score=55.69 Aligned_cols=67 Identities=12% Similarity=0.166 Sum_probs=49.4
Q ss_pred CceEEEEc-ccHHhHHHHHHHHHCCCcEEEEeCChhHH--HHHHhC-CC-----C-CC--CCHHHHhhcCCEEEEeCCC
Q 018506 45 FESVGFIG-LGNMGFRMASNLMKAGYKMAVHDVNCNVM--KMFSDM-GV-----P-TK--ETPFEVAEASDVVITMLPS 111 (355)
Q Consensus 45 ~mkIgiIG-~G~mG~~ia~~L~~~G~~V~v~dr~~~~~--~~l~~~-g~-----~-~~--~s~~e~~~~aDiVi~~v~~ 111 (355)
.|+|.|.| .|.+|+.+++.|++.||+|++.+|++++. +.+.+. ++ . .. .+..++++.+|+||.+...
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~a~~ 83 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTS 83 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHhcCCEEEEcCCC
Confidence 57899998 59999999999999999999999987764 444432 22 1 11 1245567889999977643
No 368
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=96.27 E-value=0.0028 Score=57.91 Aligned_cols=42 Identities=19% Similarity=0.224 Sum_probs=35.2
Q ss_pred CCCCCCCceEEEEcc-cHHhHHHHHHHHHCCCcEEEEeCChhH
Q 018506 39 QVPSCQFESVGFIGL-GNMGFRMASNLMKAGYKMAVHDVNCNV 80 (355)
Q Consensus 39 ~~~~~~~mkIgiIG~-G~mG~~ia~~L~~~G~~V~v~dr~~~~ 80 (355)
+......|+|.|.|+ |.+|+.++..|++.|++|++.+|+++.
T Consensus 14 ~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~ 56 (330)
T 2pzm_A 14 LVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATG 56 (330)
T ss_dssp CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSS
T ss_pred CcccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCcc
Confidence 334455689999986 999999999999999999999996543
No 369
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=96.27 E-value=0.0095 Score=53.62 Aligned_cols=42 Identities=21% Similarity=0.348 Sum_probs=31.9
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCC-cEEEEeCChhHHHHHH
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGY-KMAVHDVNCNVMKMFS 85 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~-~V~v~dr~~~~~~~l~ 85 (355)
...||.|||+|.+|+.++..|+.+|. +++++|.+.-....++
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~ 77 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMN 77 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC------
T ss_pred hCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCccChhhcc
Confidence 45789999999999999999999996 6999998764333333
No 370
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=96.23 E-value=0.006 Score=59.31 Aligned_cols=65 Identities=23% Similarity=0.405 Sum_probs=49.6
Q ss_pred CCceEEEEcccHHhHH-HHHHHHHCCCcEEEEeCChh-HHHHHHhCCCCCCC-CHHHHhhcCCEEEEe
Q 018506 44 QFESVGFIGLGNMGFR-MASNLMKAGYKMAVHDVNCN-VMKMFSDMGVPTKE-TPFEVAEASDVVITM 108 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~-ia~~L~~~G~~V~v~dr~~~-~~~~l~~~g~~~~~-s~~e~~~~aDiVi~~ 108 (355)
..++|.|||.|..|.+ +|+.|.+.|++|+++|..+. ..+.+.+.|+.+.. ...+.+.++|+||+.
T Consensus 21 ~~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~g~~~~~~~~~d~vV~S 88 (494)
T 4hv4_A 21 RVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPNSVTQHLTALGAQIYFHHRPENVLDASVVVVS 88 (494)
T ss_dssp -CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCEEESSCCGGGGTTCSEEEEC
T ss_pred cCCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHCCCEEECCCCHHHcCCCCEEEEC
Confidence 4578999999999985 99999999999999997543 45667777765432 122345689999987
No 371
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=96.21 E-value=0.0042 Score=53.63 Aligned_cols=33 Identities=27% Similarity=0.415 Sum_probs=30.7
Q ss_pred ceEEEEcccHHhHHHHHHHHHCCCcEEEEeCCh
Q 018506 46 ESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNC 78 (355)
Q Consensus 46 mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~ 78 (355)
..|.|||+|.-|...|..|+++|++|+++++++
T Consensus 3 ~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~ 35 (336)
T 3kkj_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 459999999999999999999999999999864
No 372
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=96.18 E-value=0.0031 Score=57.93 Aligned_cols=67 Identities=10% Similarity=0.019 Sum_probs=44.5
Q ss_pred CCCCceEEEEcc-cHHhHHHHHHHHHCCCcEEEEeCChhHHHHHH--hCCCCCCCCHHHHhhcCCEEEEeC
Q 018506 42 SCQFESVGFIGL-GNMGFRMASNLMKAGYKMAVHDVNCNVMKMFS--DMGVPTKETPFEVAEASDVVITML 109 (355)
Q Consensus 42 ~~~~mkIgiIG~-G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~--~~g~~~~~s~~e~~~~aDiVi~~v 109 (355)
..+.|+|.|.|+ |.+|+.++..|++.||+|++.+|+++. ..+. ...+.-..+..++++.+|+||-+.
T Consensus 16 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A 85 (347)
T 4id9_A 16 PRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-TGGEEVVGSLEDGQALSDAIMGVSAVLHLG 85 (347)
T ss_dssp -----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-SCCSEEESCTTCHHHHHHHHTTCSEEEECC
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-CCccEEecCcCCHHHHHHHHhCCCEEEECC
Confidence 456688999987 999999999999999999999998754 0000 001111123455677889998774
No 373
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=96.17 E-value=0.0096 Score=54.62 Aligned_cols=67 Identities=15% Similarity=0.066 Sum_probs=47.6
Q ss_pred CCceEEEEc-ccHHhHHHHHHHHHCCCcEEEEeCChh----HHHHHHh-------CCC-----CC--CCCHHHHhhcCCE
Q 018506 44 QFESVGFIG-LGNMGFRMASNLMKAGYKMAVHDVNCN----VMKMFSD-------MGV-----PT--KETPFEVAEASDV 104 (355)
Q Consensus 44 ~~mkIgiIG-~G~mG~~ia~~L~~~G~~V~v~dr~~~----~~~~l~~-------~g~-----~~--~~s~~e~~~~aDi 104 (355)
++|+|.|.| .|.+|+.++..|.+.||+|++.+|++. ..+.+.. .++ .. ..+..++++.+|+
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~ 103 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGVDH 103 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTCSE
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCCCE
Confidence 468999998 599999999999999999999999543 3333332 121 11 1234456678899
Q ss_pred EEEeCC
Q 018506 105 VITMLP 110 (355)
Q Consensus 105 Vi~~v~ 110 (355)
||-+..
T Consensus 104 Vih~A~ 109 (351)
T 3ruf_A 104 VLHQAA 109 (351)
T ss_dssp EEECCC
T ss_pred EEECCc
Confidence 988764
No 374
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=96.15 E-value=0.014 Score=51.80 Aligned_cols=40 Identities=13% Similarity=0.117 Sum_probs=34.2
Q ss_pred ceEEEE--cccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHH
Q 018506 46 ESVGFI--GLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFS 85 (355)
Q Consensus 46 mkIgiI--G~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~ 85 (355)
.|+.+| |.|.+|.++++.|++.|++|++.+|++++.+.+.
T Consensus 28 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~ 69 (270)
T 3ftp_A 28 KQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIG 69 (270)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 456666 6789999999999999999999999988876654
No 375
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=96.14 E-value=0.0042 Score=61.41 Aligned_cols=67 Identities=15% Similarity=0.069 Sum_probs=49.8
Q ss_pred ceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHh---CCCCCCCCHHHH-hhcCCEEEEeCCCc
Q 018506 46 ESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSD---MGVPTKETPFEV-AEASDVVITMLPSS 112 (355)
Q Consensus 46 mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~---~g~~~~~s~~e~-~~~aDiVi~~v~~~ 112 (355)
++|.|+|.|.+|..+++.|.+.|++|++.|.++++++.+.. ....-...+.++ ++++|.+|++++++
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~i~gD~t~~~~L~~agi~~ad~vi~~~~~d 419 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESPVCNDHVVVYGDATVGQTLRQAGIDRASGIIVTTNDD 419 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCSSCCSSCEEESCSSSSTHHHHHTTTSCSEEEECCSCH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHHHhhcCCEEEeCCCCHHHHHhcCccccCEEEEECCCc
Confidence 78999999999999999999999999999999988765431 001111122222 46788888888765
No 376
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=96.10 E-value=0.0046 Score=56.51 Aligned_cols=42 Identities=21% Similarity=0.234 Sum_probs=32.2
Q ss_pred CCCCCCCCceEEEEc-ccHHhHHHHHHHHHCCCcEEEEeCChh
Q 018506 38 SQVPSCQFESVGFIG-LGNMGFRMASNLMKAGYKMAVHDVNCN 79 (355)
Q Consensus 38 ~~~~~~~~mkIgiIG-~G~mG~~ia~~L~~~G~~V~v~dr~~~ 79 (355)
.+.....+|+|.|.| .|.+|+.++..|++.|++|++.+|++.
T Consensus 14 ~~~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 56 (333)
T 2q1w_A 14 LVPRGSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFAT 56 (333)
T ss_dssp -------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSS
T ss_pred eeeecCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCc
Confidence 345556778999997 699999999999999999999999754
No 377
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=96.09 E-value=0.0075 Score=54.44 Aligned_cols=65 Identities=11% Similarity=0.162 Sum_probs=39.3
Q ss_pred CceEEEEcc-cHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhc--CCEEEEeCC
Q 018506 45 FESVGFIGL-GNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEA--SDVVITMLP 110 (355)
Q Consensus 45 ~mkIgiIG~-G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~--aDiVi~~v~ 110 (355)
.|+|.|.|+ |.+|+.++..|++.||+|++.+|+++.-. .....+.-..+..++++. .|+||-+..
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~Dl~d~~~~~~~~~~~~~d~vih~A~ 69 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARPK-FEQVNLLDSNAVHHIIHDFQPHVIVHCAA 69 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC-------------------CHHHHHHHCCSEEEECC-
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCCCC-eEEecCCCHHHHHHHHHhhCCCEEEECCc
Confidence 378999986 99999999999999999999998765411 111111112344455554 899998763
No 378
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=96.08 E-value=0.0097 Score=52.47 Aligned_cols=42 Identities=12% Similarity=0.173 Sum_probs=34.5
Q ss_pred CCceEEEEc-ccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHH
Q 018506 44 QFESVGFIG-LGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFS 85 (355)
Q Consensus 44 ~~mkIgiIG-~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~ 85 (355)
..++|-|.| .|.+|..+++.|++.|++|++.+|++++.+.+.
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~ 70 (262)
T 3rkr_A 28 SGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVE 70 (262)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence 334555554 699999999999999999999999998876654
No 379
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=96.05 E-value=0.0095 Score=58.31 Aligned_cols=65 Identities=17% Similarity=0.136 Sum_probs=50.1
Q ss_pred CCceEEEEcccHHhHH-HHHHHHHCCCcEEEEeCCh--hHHHHHHhCCCCCC--CCHHHHhhcCCEEEEe
Q 018506 44 QFESVGFIGLGNMGFR-MASNLMKAGYKMAVHDVNC--NVMKMFSDMGVPTK--ETPFEVAEASDVVITM 108 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~-ia~~L~~~G~~V~v~dr~~--~~~~~l~~~g~~~~--~s~~e~~~~aDiVi~~ 108 (355)
+.++|-|||.|..|.+ +|+.|.+.|++|+++|.+. ...+.+.+.|+.+. .+.++...++|+||+.
T Consensus 18 ~~~~i~~iGiGg~Gms~lA~~l~~~G~~V~~sD~~~~~~~~~~L~~~gi~~~~G~~~~~~~~~~d~vV~S 87 (524)
T 3hn7_A 18 QGMHIHILGICGTFMGSLALLARALGHTVTGSDANIYPPMSTQLEQAGVTIEEGYLIAHLQPAPDLVVVG 87 (524)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCCTTHHHHHHHTTCEEEESCCGGGGCSCCSEEEEC
T ss_pred cCCEEEEEEecHhhHHHHHHHHHhCCCEEEEECCCCCcHHHHHHHHCCCEEECCCCHHHcCCCCCEEEEC
Confidence 4588999999999985 7888999999999999753 45567777777543 2444444579999986
No 380
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=96.03 E-value=0.014 Score=57.50 Aligned_cols=66 Identities=12% Similarity=0.126 Sum_probs=52.5
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhC-CCCC----CCCHHHH----hhcCCEEEEeC
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDM-GVPT----KETPFEV----AEASDVVITML 109 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~-g~~~----~~s~~e~----~~~aDiVi~~v 109 (355)
..++|-|+|.|.+|..+++.|.+.|++|++.|.++++++.+.+. +... .++.+.+ ++++|.+|++.
T Consensus 126 ~~~hviI~G~g~~g~~la~~L~~~~~~vvvid~~~~~~~~~~~~~~~~~i~Gd~~~~~~L~~a~i~~a~~vi~t~ 200 (565)
T 4gx0_A 126 TRGHILIFGIDPITRTLIRKLESRNHLFVVVTDNYDQALHLEEQEGFKVVYGSPTDAHVLAGLRVAAARSIIANL 200 (565)
T ss_dssp CCSCEEEESCCHHHHHHHHHTTTTTCCEEEEESCHHHHHHHHHSCSSEEEESCTTCHHHHHHTTGGGCSEEEECS
T ss_pred cCCeEEEECCChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCCeEEEeCCCCHHHHHhcCcccCCEEEEeC
Confidence 45789999999999999999999999999999999999998887 6432 1222221 36899998843
No 381
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=96.02 E-value=0.016 Score=53.36 Aligned_cols=40 Identities=20% Similarity=0.372 Sum_probs=28.9
Q ss_pred CceEEEEcccHHhHHHHHHHHHC-CCcEE-EEeC--ChhHHHHH
Q 018506 45 FESVGFIGLGNMGFRMASNLMKA-GYKMA-VHDV--NCNVMKMF 84 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~~-G~~V~-v~dr--~~~~~~~l 84 (355)
++||||+|+|.+|..+++.|.+. +.+|. +.|+ +++....+
T Consensus 3 ~ikVgI~G~GrIGr~l~R~l~~~p~vevvaI~d~~~~~~~~~~l 46 (337)
T 3e5r_O 3 KIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYM 46 (337)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCSSEEEEEEECSSSCHHHHHHH
T ss_pred ceEEEEECcCHHHHHHHHHHhCCCCeEEEEEECCCCCHHHHHHh
Confidence 36999999999999999999876 44654 4453 45544444
No 382
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=96.02 E-value=0.012 Score=52.47 Aligned_cols=71 Identities=8% Similarity=-0.102 Sum_probs=37.3
Q ss_pred CcccccccccccccccccccccCCCCCCCCCceEEEE-cccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHH
Q 018506 15 SNLKSTVLLSSPFQSSAMRRFFSSQVPSCQFESVGFI-GLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFS 85 (355)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkIgiI-G~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~ 85 (355)
+|+.-.+++=..|.+..+..........+..++|-|. |.|.+|..+++.|++.|++|++.+|++++.+.+.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~ 85 (285)
T 2c07_A 14 SGHIEGRHMKLEFMNLLSENKKENYYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVV 85 (285)
T ss_dssp ---------------------CCCCCCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHH
T ss_pred cCccccccccchhhccCCccccccccccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH
Confidence 3444444444434443333333333333444567677 5789999999999999999999999988766543
No 383
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=96.02 E-value=0.0053 Score=55.10 Aligned_cols=58 Identities=14% Similarity=0.085 Sum_probs=41.8
Q ss_pred ceEEEEcc-cHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeC
Q 018506 46 ESVGFIGL-GNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITML 109 (355)
Q Consensus 46 mkIgiIG~-G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v 109 (355)
|||.|.|+ |.+|+.++..|.++||+|++..|+++..+ +.......+.++++|.||-+.
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~~------~~~~~~~~~~l~~~d~vihla 59 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPGR------ITWDELAASGLPSCDAAVNLA 59 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTE------EEHHHHHHHCCCSCSEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcCe------eecchhhHhhccCCCEEEEec
Confidence 89999986 99999999999999999999999865311 000011123346788877554
No 384
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=95.98 E-value=0.0062 Score=54.07 Aligned_cols=64 Identities=13% Similarity=0.227 Sum_probs=46.2
Q ss_pred eEEEEcc-cHHhHHHHHHHHHC--CCcEEEEeCChhHHHHHHhCCCCC-----C--CCHHHHhhcCCEEEEeCC
Q 018506 47 SVGFIGL-GNMGFRMASNLMKA--GYKMAVHDVNCNVMKMFSDMGVPT-----K--ETPFEVAEASDVVITMLP 110 (355)
Q Consensus 47 kIgiIG~-G~mG~~ia~~L~~~--G~~V~v~dr~~~~~~~l~~~g~~~-----~--~s~~e~~~~aDiVi~~v~ 110 (355)
||.|.|+ |.+|+.++..|.+. |++|++.+|++++.+.+...++.. . .+..++++.+|+||-+..
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~ 74 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSALQGVEKLLLISS 74 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECC-
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCeEEEcCCCCHHHHHHHHhCCCEEEEeCC
Confidence 5788886 99999999999998 999999999988766555433221 1 123445567787776653
No 385
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=95.95 E-value=0.014 Score=53.67 Aligned_cols=68 Identities=15% Similarity=0.131 Sum_probs=47.9
Q ss_pred CCCceEEEEcc-cHHhHHHHHHHHHCCCcEEEEeCChh----HHHHHHh-------CCC-----CCC--CCHHHHhhcCC
Q 018506 43 CQFESVGFIGL-GNMGFRMASNLMKAGYKMAVHDVNCN----VMKMFSD-------MGV-----PTK--ETPFEVAEASD 103 (355)
Q Consensus 43 ~~~mkIgiIG~-G~mG~~ia~~L~~~G~~V~v~dr~~~----~~~~l~~-------~g~-----~~~--~s~~e~~~~aD 103 (355)
+.+|+|.|.|+ |.+|+.++..|++.|++|++.+|++. .++.+.+ .++ ... .+..++++.+|
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d 104 (352)
T 1sb8_A 25 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVD 104 (352)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCS
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCCC
Confidence 45689999987 99999999999999999999998653 3333321 121 111 23445667889
Q ss_pred EEEEeCC
Q 018506 104 VVITMLP 110 (355)
Q Consensus 104 iVi~~v~ 110 (355)
+||-+..
T Consensus 105 ~vih~A~ 111 (352)
T 1sb8_A 105 YVLHQAA 111 (352)
T ss_dssp EEEECCS
T ss_pred EEEECCc
Confidence 8888764
No 386
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=95.93 E-value=0.017 Score=53.21 Aligned_cols=67 Identities=13% Similarity=0.127 Sum_probs=49.7
Q ss_pred CCceEEEEc-ccHHhHHHHHHHHHC-CC-cEEEEeCChhHHHHHHh----CCC-----CCC--CCHHHHhhcCCEEEEeC
Q 018506 44 QFESVGFIG-LGNMGFRMASNLMKA-GY-KMAVHDVNCNVMKMFSD----MGV-----PTK--ETPFEVAEASDVVITML 109 (355)
Q Consensus 44 ~~mkIgiIG-~G~mG~~ia~~L~~~-G~-~V~v~dr~~~~~~~l~~----~g~-----~~~--~s~~e~~~~aDiVi~~v 109 (355)
+.|+|.|.| .|.+|+.+++.|++. |+ +|++++|++++.+.+.+ .++ ... .+..++++..|+||-+.
T Consensus 20 ~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~D~Vih~A 99 (344)
T 2gn4_A 20 DNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDICIHAA 99 (344)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTTCSEEEECC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhcCCEEEECC
Confidence 347899997 699999999999999 97 99999999887765543 121 111 23445667899999886
Q ss_pred C
Q 018506 110 P 110 (355)
Q Consensus 110 ~ 110 (355)
.
T Consensus 100 a 100 (344)
T 2gn4_A 100 A 100 (344)
T ss_dssp C
T ss_pred C
Confidence 3
No 387
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=95.93 E-value=0.0019 Score=60.19 Aligned_cols=91 Identities=16% Similarity=0.164 Sum_probs=52.2
Q ss_pred CceEEEEc-ccHHhHHHHHHHHHCCCc---EEEEe-C-ChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHHHH
Q 018506 45 FESVGFIG-LGNMGFRMASNLMKAGYK---MAVHD-V-NCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDV 118 (355)
Q Consensus 45 ~mkIgiIG-~G~mG~~ia~~L~~~G~~---V~v~d-r-~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~v 118 (355)
++||+||| .|..|.-|.+.|.+.+|+ +.... + +..+.-.+......+.....+.++++|+||.|+|... .++.
T Consensus 2 ~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~saG~~~~~~~~~~~~~~~~~~~~~~~Dvvf~a~~~~~-s~~~ 80 (366)
T 3pwk_A 2 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKFKDQDITIEETTETAFEGVDIALFSAGSST-SAKY 80 (366)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTTTCEEEETTEEEEEEECCTTTTTTCSEEEECSCHHH-HHHH
T ss_pred CcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccCCCcceecCCCceEeeCCHHHhcCCCEEEECCChHh-HHHH
Confidence 47999999 899999999999998774 33332 2 2111100110001111101123568999999998653 3333
Q ss_pred hcCCCccccCCCCCCCeEEEEcCCCC
Q 018506 119 YNGPNGLLQGGNSVRPQLLIDSSTID 144 (355)
Q Consensus 119 l~~~~~~l~~~~~~~~~ivi~~st~~ 144 (355)
... +++ .|..+||.|+..
T Consensus 81 a~~---~~~-----~G~~vIDlSa~~ 98 (366)
T 3pwk_A 81 APY---AVK-----AGVVVVDNTSYF 98 (366)
T ss_dssp HHH---HHH-----TTCEEEECSSTT
T ss_pred HHH---HHH-----CCCEEEEcCCcc
Confidence 321 232 346889998853
No 388
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=95.93 E-value=0.0087 Score=55.70 Aligned_cols=65 Identities=17% Similarity=0.218 Sum_probs=45.5
Q ss_pred CceEEEEc-ccHHhHHHHHHHHHCCC-----cEEEEeCChh----HH----HHHHhCC------CCCCCCHHHHhhcCCE
Q 018506 45 FESVGFIG-LGNMGFRMASNLMKAGY-----KMAVHDVNCN----VM----KMFSDMG------VPTKETPFEVAEASDV 104 (355)
Q Consensus 45 ~mkIgiIG-~G~mG~~ia~~L~~~G~-----~V~v~dr~~~----~~----~~l~~~g------~~~~~s~~e~~~~aDi 104 (355)
.+||+||| +|.+|.+++-.|+..+. ++.+++.+.+ ++ ..+.+.. ....++..++++++|+
T Consensus 32 ~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~~v~i~~~~y~~~~daDv 111 (375)
T 7mdh_A 32 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYEVFEDVDW 111 (375)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTCSE
T ss_pred CCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhcCCcEEecCCHHHhCCCCE
Confidence 47999999 79999999999998764 2766544322 22 2333221 2234567888999999
Q ss_pred EEEeC
Q 018506 105 VITML 109 (355)
Q Consensus 105 Vi~~v 109 (355)
||++-
T Consensus 112 VVita 116 (375)
T 7mdh_A 112 ALLIG 116 (375)
T ss_dssp EEECC
T ss_pred EEEcC
Confidence 99985
No 389
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=95.92 E-value=0.0093 Score=55.38 Aligned_cols=91 Identities=16% Similarity=0.216 Sum_probs=53.6
Q ss_pred CCceEEEEc-ccHHhHHHHHHHHHCCC-cEE-EEeCCh--hHHHHHHh-----------CCCCCCC-CHHHHhhcCCEEE
Q 018506 44 QFESVGFIG-LGNMGFRMASNLMKAGY-KMA-VHDVNC--NVMKMFSD-----------MGVPTKE-TPFEVAEASDVVI 106 (355)
Q Consensus 44 ~~mkIgiIG-~G~mG~~ia~~L~~~G~-~V~-v~dr~~--~~~~~l~~-----------~g~~~~~-s~~e~~~~aDiVi 106 (355)
+++|||||| .|..|.-|.+.|.+.-+ ++. +..++. .++..... ....+.. +. +.+.++|+||
T Consensus 6 ~~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~~~~~-~~~~~vDvvf 84 (359)
T 4dpk_A 6 RTLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIKPTDP-KLMDDVDIIF 84 (359)
T ss_dssp CCEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCEECCG-GGCTTCCEEE
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccccccccccccccceEEeCCH-HHhcCCCEEE
Confidence 357899999 69999999998876532 444 334432 22332100 0122211 23 3346899999
Q ss_pred EeCCCchHHHHHhcCCCccccCCCCCCCeEEEEcCCCC
Q 018506 107 TMLPSSSHVLDVYNGPNGLLQGGNSVRPQLLIDSSTID 144 (355)
Q Consensus 107 ~~v~~~~~~~~vl~~~~~~l~~~~~~~~~ivi~~st~~ 144 (355)
+|+|...+ ++.... +++ .|..+||.|+..
T Consensus 85 ~a~p~~~s-~~~a~~---~~~-----~G~~vIDlSa~~ 113 (359)
T 4dpk_A 85 SPLPQGAA-GPVEEQ---FAK-----EGFPVISNSPDH 113 (359)
T ss_dssp ECCCTTTH-HHHHHH---HHH-----TTCEEEECSSTT
T ss_pred ECCChHHH-HHHHHH---HHH-----CCCEEEEcCCCc
Confidence 99998643 333221 232 356889988764
No 390
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=95.92 E-value=0.0093 Score=55.38 Aligned_cols=91 Identities=16% Similarity=0.216 Sum_probs=53.7
Q ss_pred CCceEEEEc-ccHHhHHHHHHHHHCCC-cEE-EEeCCh--hHHHHHHh-----------CCCCCCC-CHHHHhhcCCEEE
Q 018506 44 QFESVGFIG-LGNMGFRMASNLMKAGY-KMA-VHDVNC--NVMKMFSD-----------MGVPTKE-TPFEVAEASDVVI 106 (355)
Q Consensus 44 ~~mkIgiIG-~G~mG~~ia~~L~~~G~-~V~-v~dr~~--~~~~~l~~-----------~g~~~~~-s~~e~~~~aDiVi 106 (355)
+++|||||| .|..|.-|.+.|.+.-+ ++. +..++. .++..... ....+.. +. +.+.++|+||
T Consensus 6 ~~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~~~~~-~~~~~vDvvf 84 (359)
T 4dpl_A 6 RTLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIKPTDP-KLMDDVDIIF 84 (359)
T ss_dssp CCEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCEECCG-GGCTTCCEEE
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccccccccccccccceEEeCCH-HHhcCCCEEE
Confidence 357899999 69999999998876532 444 334432 22332100 0122211 23 3346899999
Q ss_pred EeCCCchHHHHHhcCCCccccCCCCCCCeEEEEcCCCC
Q 018506 107 TMLPSSSHVLDVYNGPNGLLQGGNSVRPQLLIDSSTID 144 (355)
Q Consensus 107 ~~v~~~~~~~~vl~~~~~~l~~~~~~~~~ivi~~st~~ 144 (355)
+|+|...+ ++.... +++ .|..+||.|+..
T Consensus 85 ~a~p~~~s-~~~a~~---~~~-----~G~~vIDlSa~~ 113 (359)
T 4dpl_A 85 SPLPQGAA-GPVEEQ---FAK-----EGFPVISNSPDH 113 (359)
T ss_dssp ECCCTTTH-HHHHHH---HHH-----TTCEEEECSSTT
T ss_pred ECCChHHH-HHHHHH---HHH-----CCCEEEEcCCCc
Confidence 99998643 333221 232 356889998864
No 391
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=95.91 E-value=0.0066 Score=57.09 Aligned_cols=37 Identities=22% Similarity=0.174 Sum_probs=32.7
Q ss_pred CCCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChh
Q 018506 43 CQFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCN 79 (355)
Q Consensus 43 ~~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~ 79 (355)
.+.++|.|||+|..|..+|..|+++|++|+++++++.
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~ 57 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKE 57 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 4457899999999999999999999999999998764
No 392
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=95.90 E-value=0.015 Score=51.04 Aligned_cols=42 Identities=17% Similarity=0.262 Sum_probs=36.2
Q ss_pred ceEEEE--cccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhC
Q 018506 46 ESVGFI--GLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDM 87 (355)
Q Consensus 46 mkIgiI--G~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~ 87 (355)
.|..+| |.+.+|.++|+.|++.|++|.+.+|++++.+++.+.
T Consensus 2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~ 45 (247)
T 3ged_A 2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKE 45 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTT
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh
Confidence 466666 688899999999999999999999999888877654
No 393
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=95.88 E-value=0.033 Score=48.69 Aligned_cols=40 Identities=10% Similarity=0.099 Sum_probs=33.1
Q ss_pred ceEEEE-cccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHH
Q 018506 46 ESVGFI-GLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFS 85 (355)
Q Consensus 46 mkIgiI-G~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~ 85 (355)
+++-|. |.|.+|.++++.|++.|++|++.+|++++.+.+.
T Consensus 13 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~ 53 (252)
T 3f1l_A 13 RIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVA 53 (252)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 344455 5689999999999999999999999998876654
No 394
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=95.86 E-value=0.0038 Score=58.43 Aligned_cols=93 Identities=16% Similarity=0.185 Sum_probs=53.7
Q ss_pred CCCceEEEEc-ccHHhHHHHHHHHHCCC-cEE-EE-eC-Chh-HHHHHHh-----------CCCCCCC-CHHHHhhcCCE
Q 018506 43 CQFESVGFIG-LGNMGFRMASNLMKAGY-KMA-VH-DV-NCN-VMKMFSD-----------MGVPTKE-TPFEVAEASDV 104 (355)
Q Consensus 43 ~~~mkIgiIG-~G~mG~~ia~~L~~~G~-~V~-v~-dr-~~~-~~~~l~~-----------~g~~~~~-s~~e~~~~aDi 104 (355)
|+++|||||| .|..|.-|.+.|.+..+ ++. ++ .+ +.. ++..... ....+.. +..+.++++|+
T Consensus 17 M~~~kVaIvGAtG~vG~ell~lL~~hp~~el~~l~aS~~saGk~~~~~~~~~~~~~~p~~~~~~~v~~~~~~~~~~~~Dv 96 (381)
T 3hsk_A 17 MSVKKAGVLGATGSVGQRFILLLSKHPEFEIHALGASSRSAGKKYKDAASWKQTETLPETEQDIVVQECKPEGNFLECDV 96 (381)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHCCCCCSSCCCHHHHTCBCEESSSCTTGGGCSE
T ss_pred CCccEEEEECCCChHHHHHHHHHHcCCCceEEEeeccccccCCCHHHhcccccccccccccccceEEeCchhhhcccCCE
Confidence 4668999999 79999999998887542 453 43 23 222 2221110 0111111 12214578999
Q ss_pred EEEeCCCchHHHHHhcCCCccccCCCCCCCeEEEEcCCCC
Q 018506 105 VITMLPSSSHVLDVYNGPNGLLQGGNSVRPQLLIDSSTID 144 (355)
Q Consensus 105 Vi~~v~~~~~~~~vl~~~~~~l~~~~~~~~~ivi~~st~~ 144 (355)
||+|+|.. ..++.... +++ .+..|||.|+..
T Consensus 97 vf~alp~~-~s~~~~~~---~~~-----~G~~VIDlSa~f 127 (381)
T 3hsk_A 97 VFSGLDAD-VAGDIEKS---FVE-----AGLAVVSNAKNY 127 (381)
T ss_dssp EEECCCHH-HHHHHHHH---HHH-----TTCEEEECCSTT
T ss_pred EEECCChh-HHHHHHHH---HHh-----CCCEEEEcCCcc
Confidence 99999975 33333322 222 356889998864
No 395
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=95.83 E-value=0.029 Score=52.30 Aligned_cols=75 Identities=20% Similarity=0.247 Sum_probs=53.6
Q ss_pred CceEEEEcccHHhHHHHHHHHHCCC-cEEEEeCChhHHHHHHhCCCCCC-------CCHHHHhh-----cCCEEEEeCCC
Q 018506 45 FESVGFIGLGNMGFRMASNLMKAGY-KMAVHDVNCNVMKMFSDMGVPTK-------ETPFEVAE-----ASDVVITMLPS 111 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~~G~-~V~v~dr~~~~~~~l~~~g~~~~-------~s~~e~~~-----~aDiVi~~v~~ 111 (355)
-.+|.|+|+|.+|...++.+...|. +|++.++++++.+.+++.|+..+ .+..+.+. ..|+||-++..
T Consensus 194 g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg~D~vid~~g~ 273 (378)
T 3uko_A 194 GSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFECIGN 273 (378)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEEccccCchhHHHHHHHhcCCCCCEEEECCCC
Confidence 3679999999999999999988998 79999999999998887776432 12222221 35666666665
Q ss_pred chHHHHHh
Q 018506 112 SSHVLDVY 119 (355)
Q Consensus 112 ~~~~~~vl 119 (355)
+..++..+
T Consensus 274 ~~~~~~~~ 281 (378)
T 3uko_A 274 VSVMRAAL 281 (378)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 44444443
No 396
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=95.81 E-value=0.013 Score=51.59 Aligned_cols=68 Identities=7% Similarity=0.055 Sum_probs=47.6
Q ss_pred ceEEEE--cccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEe--CCCchHHHHHhcC
Q 018506 46 ESVGFI--GLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITM--LPSSSHVLDVYNG 121 (355)
Q Consensus 46 mkIgiI--G~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~--v~~~~~~~~vl~~ 121 (355)
-|+++| |.+.+|.++|+.|++.|..|.+++|++++++++.+. ..+. ..+++.+. +.++++++.++..
T Consensus 7 gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~-------i~~~--g~~~~~~~~Dvt~~~~v~~~~~~ 77 (254)
T 4fn4_A 7 NKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQE-------LRGM--GKEVLGVKADVSKKKDVEEFVRR 77 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-------HHHT--TCCEEEEECCTTSHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHH-------HHhc--CCcEEEEEccCCCHHHHHHHHHH
Confidence 467787 778899999999999999999999999888766531 1111 22333333 5566677766654
Q ss_pred C
Q 018506 122 P 122 (355)
Q Consensus 122 ~ 122 (355)
.
T Consensus 78 ~ 78 (254)
T 4fn4_A 78 T 78 (254)
T ss_dssp H
T ss_pred H
Confidence 3
No 397
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=95.81 E-value=0.045 Score=48.92 Aligned_cols=53 Identities=13% Similarity=0.142 Sum_probs=41.1
Q ss_pred cccCCCCCCCCCceEEEE-cccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHh
Q 018506 34 RFFSSQVPSCQFESVGFI-GLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSD 86 (355)
Q Consensus 34 ~~~~~~~~~~~~mkIgiI-G~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~ 86 (355)
.|...+++..+.++|-|. |.|.+|.++++.|++.|++|++.+|++++.+.+.+
T Consensus 5 ~~~~~~~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~ 58 (291)
T 3rd5_A 5 GWTAADLPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAAR 58 (291)
T ss_dssp CCCGGGCCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHT
T ss_pred CCChhhccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence 344444544554556666 56899999999999999999999999998877654
No 398
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=95.79 E-value=0.011 Score=55.20 Aligned_cols=97 Identities=16% Similarity=0.120 Sum_probs=65.2
Q ss_pred CCCCCceEEEEcccHHhHHHHHHHHHCCC-cEEEEeCCh-------hHHHHHH----h--CCCCCCCCHHHHhhcCCEEE
Q 018506 41 PSCQFESVGFIGLGNMGFRMASNLMKAGY-KMAVHDVNC-------NVMKMFS----D--MGVPTKETPFEVAEASDVVI 106 (355)
Q Consensus 41 ~~~~~mkIgiIG~G~mG~~ia~~L~~~G~-~V~v~dr~~-------~~~~~l~----~--~g~~~~~s~~e~~~~aDiVi 106 (355)
......||.|+|+|..|.++++.+...|. +|+++|++- +++..++ . .......++.|+++.+|++|
T Consensus 184 ~~l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~~~~~~~L~eav~~ADV~I 263 (398)
T 2a9f_A 184 KSLDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFGIINEQEAAQLAPHHLDIAKVTNREFKSGTLEDALEGADIFI 263 (398)
T ss_dssp CCTTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTCCCSCCC---CHHHHHSCTTCCCSCSHHHHTTCSEE
T ss_pred CCCCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCCcccCCccccchHHHHHHhhccCcccchhhHHHHhccCCEEE
Confidence 34566899999999999999999999998 899999873 2122211 1 11122457999999999877
Q ss_pred EeCCCchHHHHHhcCCCccccCCCCCCCeEEEEcCCCCHH
Q 018506 107 TMLPSSSHVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQ 146 (355)
Q Consensus 107 ~~v~~~~~~~~vl~~~~~~l~~~~~~~~~ivi~~st~~~~ 146 (355)
=+.....-.++++..+ . ++.+|+.+|+-.|+
T Consensus 264 G~Sapgl~T~EmVk~M-------a--~~pIIfalsNPt~E 294 (398)
T 2a9f_A 264 GVSAPGVLKAEWISKM-------A--ARPVIFAMANPIPE 294 (398)
T ss_dssp ECCSTTCCCHHHHHTS-------C--SSCEEEECCSSSCS
T ss_pred ecCCCCCCCHHHHHhh-------C--CCCEEEECCCCCcc
Confidence 5543122233444332 2 45699999997764
No 399
>1p3d_A UDP-N-acetylmuramate--alanine ligase; alpha/beta protein; HET: UMA ANP; 1.70A {Haemophilus influenzae} SCOP: c.5.1.1 c.59.1.1 c.72.2.1 PDB: 1gqq_A* 1p31_A* 1gqy_A*
Probab=95.76 E-value=0.016 Score=56.01 Aligned_cols=64 Identities=25% Similarity=0.497 Sum_probs=49.0
Q ss_pred CCceEEEEcccHHhHH-HHHHHHHCCCcEEEEeCChhH-HHHHHhCCCCCC--CCHHHHhhcCCEEEEe
Q 018506 44 QFESVGFIGLGNMGFR-MASNLMKAGYKMAVHDVNCNV-MKMFSDMGVPTK--ETPFEVAEASDVVITM 108 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~-ia~~L~~~G~~V~v~dr~~~~-~~~l~~~g~~~~--~s~~e~~~~aDiVi~~ 108 (355)
..++|.|||+|..|.+ +|+.|.+.|++|.++|..... .+.+.+.|+... .+. +.++.+|+||+.
T Consensus 17 ~~~~i~viG~G~sG~s~~A~~l~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~g~~~-~~~~~a~~vv~s 84 (475)
T 1p3d_A 17 RVQQIHFIGIGGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQAGAKIYIGHAE-EHIEGASVVVVS 84 (475)
T ss_dssp TCCEEEEETTTSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHHTTCEEEESCCG-GGGTTCSEEEEC
T ss_pred cCCEEEEEeecHHHHHHHHHHHHhCCCEEEEECCCCCHHHHHHHhCCCEEECCCCH-HHcCCCCEEEEC
Confidence 4578999999999997 999999999999999975543 456666776543 223 345689998886
No 400
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=95.76 E-value=0.02 Score=52.09 Aligned_cols=64 Identities=17% Similarity=0.271 Sum_probs=47.5
Q ss_pred ceEEEEcc-cHHhHHHHHHHHHC-CCcEEEEeCChhHHHHHHhC-CC-----CCCC---CHHHHhhcCCEEEEeC
Q 018506 46 ESVGFIGL-GNMGFRMASNLMKA-GYKMAVHDVNCNVMKMFSDM-GV-----PTKE---TPFEVAEASDVVITML 109 (355)
Q Consensus 46 mkIgiIG~-G~mG~~ia~~L~~~-G~~V~v~dr~~~~~~~l~~~-g~-----~~~~---s~~e~~~~aDiVi~~v 109 (355)
|+|.|.|+ |.+|+.++..|.+. ||+|++.+|++++.+.+... ++ ...+ ...++++.+|+||-+.
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~d~vih~A 75 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLV 75 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECB
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhhccCCCEEEEcc
Confidence 68999986 99999999999998 89999999988776544321 21 2222 2445667899999764
No 401
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=95.75 E-value=0.016 Score=51.32 Aligned_cols=41 Identities=22% Similarity=0.260 Sum_probs=33.7
Q ss_pred ceEEEE--cccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHh
Q 018506 46 ESVGFI--GLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSD 86 (355)
Q Consensus 46 mkIgiI--G~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~ 86 (355)
.|+.+| |.|.+|.++++.|++.|++|++.+|++++.+.+.+
T Consensus 4 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~ 46 (264)
T 3tfo_A 4 DKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIAT 46 (264)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence 355555 56899999999999999999999999988776543
No 402
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=95.73 E-value=0.017 Score=51.36 Aligned_cols=40 Identities=15% Similarity=0.241 Sum_probs=33.2
Q ss_pred ceEEEE-cccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHH
Q 018506 46 ESVGFI-GLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFS 85 (355)
Q Consensus 46 mkIgiI-G~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~ 85 (355)
+++-|. |.|.+|.++++.|++.|++|++.+|++++.+.+.
T Consensus 33 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~ 73 (276)
T 3r1i_A 33 KRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVA 73 (276)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 445555 5689999999999999999999999988776654
No 403
>2f00_A UDP-N-acetylmuramate--L-alanine ligase; amide bond ligase, ATPase, bacterial cell WALL; 2.50A {Escherichia coli}
Probab=95.72 E-value=0.017 Score=55.95 Aligned_cols=64 Identities=25% Similarity=0.516 Sum_probs=48.9
Q ss_pred CCceEEEEcccHHhHH-HHHHHHHCCCcEEEEeCChh-HHHHHHhCCCCCC--CCHHHHhhcCCEEEEe
Q 018506 44 QFESVGFIGLGNMGFR-MASNLMKAGYKMAVHDVNCN-VMKMFSDMGVPTK--ETPFEVAEASDVVITM 108 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~-ia~~L~~~G~~V~v~dr~~~-~~~~l~~~g~~~~--~s~~e~~~~aDiVi~~ 108 (355)
..++|.|||+|..|.+ +|+.|.+.|++|.++|.... ..+.+.+.|+.+. .+. +.++.+|+||+.
T Consensus 18 ~~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~g~~~-~~~~~a~~vv~s 85 (491)
T 2f00_A 18 RVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPNPVTQQLMNLGATIYFNHRP-ENVRDASVVVVS 85 (491)
T ss_dssp TCCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCEEESSCCG-GGGTTCSEEEEC
T ss_pred cCCEEEEEEcCHHHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHCCCEEECCCCH-HHcCCCCEEEEC
Confidence 4578999999999997 99999999999999997543 3456666776543 223 345689999886
No 404
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=95.72 E-value=0.021 Score=50.82 Aligned_cols=53 Identities=15% Similarity=0.184 Sum_probs=34.9
Q ss_pred cccCCCCCCCCCceEEEEcc-cH--HhHHHHHHHHHCCCcEEEEeCCh--hHHHHHHh
Q 018506 34 RFFSSQVPSCQFESVGFIGL-GN--MGFRMASNLMKAGYKMAVHDVNC--NVMKMFSD 86 (355)
Q Consensus 34 ~~~~~~~~~~~~mkIgiIG~-G~--mG~~ia~~L~~~G~~V~v~dr~~--~~~~~l~~ 86 (355)
.+....|...+.++|-|.|+ |. +|.++++.|++.|++|++.+|+. +.++.+.+
T Consensus 15 ~~~~~~M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~ 72 (280)
T 3nrc_A 15 VPRGSHMGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCA 72 (280)
T ss_dssp -------CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHG
T ss_pred CCCCCcccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHH
Confidence 33344444444456666675 55 99999999999999999999987 55555543
No 405
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=95.71 E-value=0.02 Score=50.53 Aligned_cols=41 Identities=10% Similarity=0.080 Sum_probs=33.5
Q ss_pred ceEEEE-cccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHh
Q 018506 46 ESVGFI-GLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSD 86 (355)
Q Consensus 46 mkIgiI-G~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~ 86 (355)
+++-|. |.|.+|.++++.|++.|++|++.+|++++.+.+.+
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~ 53 (264)
T 3ucx_A 12 KVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAK 53 (264)
T ss_dssp CEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred cEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHH
Confidence 344455 56789999999999999999999999988776543
No 406
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=95.68 E-value=0.046 Score=50.39 Aligned_cols=89 Identities=19% Similarity=0.197 Sum_probs=56.7
Q ss_pred CCceEEEEc-ccHHhHHHHHHHHHCCC-cEEEEe-C-Chh-HHHH----HHhCCCCCC-CCHHHHhhcCCEEEEeCCCch
Q 018506 44 QFESVGFIG-LGNMGFRMASNLMKAGY-KMAVHD-V-NCN-VMKM----FSDMGVPTK-ETPFEVAEASDVVITMLPSSS 113 (355)
Q Consensus 44 ~~mkIgiIG-~G~mG~~ia~~L~~~G~-~V~v~d-r-~~~-~~~~----l~~~g~~~~-~s~~e~~~~aDiVi~~v~~~~ 113 (355)
-|.|||||| .|..|.-|.+.|.+..+ ++.... + +.. ++.. +. ....+. .+.++..+++|++|+|+|..
T Consensus 12 ~~~~V~IvGAtG~vG~ellrlL~~hP~~el~~l~S~~~aG~~~~~~~p~~~-~~l~~~~~~~~~~~~~~Dvvf~alp~~- 89 (351)
T 1vkn_A 12 HMIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPSTL-ENSILSEFDPEKVSKNCDVLFTALPAG- 89 (351)
T ss_dssp CCEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGGC-CCCBCBCCCHHHHHHHCSEEEECCSTT-
T ss_pred ceeEEEEECCCCHHHHHHHHHHHcCCCcEEEEEeCcccccCChHHhChhhc-cCceEEeCCHHHhhcCCCEEEECCCcH-
Confidence 467999995 79999999999998743 455443 2 211 2221 21 222222 24555557899999999986
Q ss_pred HHHHHhcCCCccccCCCCCCCeEEEEcCCCC
Q 018506 114 HVLDVYNGPNGLLQGGNSVRPQLLIDSSTID 144 (355)
Q Consensus 114 ~~~~vl~~~~~~l~~~~~~~~~ivi~~st~~ 144 (355)
..++..... .+..|||.|+..
T Consensus 90 ~s~~~~~~~----------~g~~VIDlSsdf 110 (351)
T 1vkn_A 90 ASYDLVREL----------KGVKIIDLGADF 110 (351)
T ss_dssp HHHHHHTTC----------CSCEEEESSSTT
T ss_pred HHHHHHHHh----------CCCEEEECChhh
Confidence 444444332 245899999865
No 407
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=95.67 E-value=0.027 Score=51.83 Aligned_cols=45 Identities=18% Similarity=0.156 Sum_probs=39.6
Q ss_pred CceEEEEcccHHhHHHHHHHHHCCC-cEEEEeCChhHHHHHHhCCC
Q 018506 45 FESVGFIGLGNMGFRMASNLMKAGY-KMAVHDVNCNVMKMFSDMGV 89 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~~G~-~V~v~dr~~~~~~~l~~~g~ 89 (355)
-.+|.|+|+|.+|...++.+...|. +|++.++++++.+.+.+.|+
T Consensus 168 g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga 213 (348)
T 2d8a_A 168 GKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGA 213 (348)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCC
Confidence 3579999999999999999999999 89999999998887776554
No 408
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=95.65 E-value=0.014 Score=53.89 Aligned_cols=76 Identities=22% Similarity=0.304 Sum_probs=56.8
Q ss_pred CceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCC-CCHHHHhhcCCEEEEeCCCchHHHHHhc
Q 018506 45 FESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTK-ETPFEVAEASDVVITMLPSSSHVLDVYN 120 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~-~s~~e~~~~aDiVi~~v~~~~~~~~vl~ 120 (355)
-.+|.|+|+|.+|...++.+...|.+|++.++++++.+.+.+.|+... .+.+++.+..|+||-++..+..++..+.
T Consensus 177 g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~D~vid~~g~~~~~~~~~~ 253 (348)
T 3two_A 177 GTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVKHFYTDPKQCKEELDFIISTIPTHYDLKDYLK 253 (348)
T ss_dssp TCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCSEEESSGGGCCSCEEEEEECCCSCCCHHHHHT
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCeecCCHHHHhcCCCEEEECCCcHHHHHHHHH
Confidence 468999999999999999999999999999999999998888775422 2333333357788877766545555443
No 409
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=95.64 E-value=0.015 Score=51.83 Aligned_cols=40 Identities=13% Similarity=0.167 Sum_probs=33.2
Q ss_pred ceEEEE--cccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHH
Q 018506 46 ESVGFI--GLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFS 85 (355)
Q Consensus 46 mkIgiI--G~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~ 85 (355)
.|+.+| |.|.+|.++++.|++.|++|++.+|++++.+.+.
T Consensus 24 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~ 65 (279)
T 3sju_A 24 PQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAV 65 (279)
T ss_dssp -CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 455555 5789999999999999999999999998876654
No 410
>3h2z_A Mannitol-1-phosphate 5-dehydrogenase; PSI- protein structure initiative, structural genomics, midwest for structural genomics (MCSG); 1.90A {Shigella flexneri 2a str}
Probab=95.64 E-value=0.021 Score=53.32 Aligned_cols=73 Identities=21% Similarity=0.266 Sum_probs=54.4
Q ss_pred ceEEEEcccHHhHH-HHHHHHHCCCcEEEEeCChhHHHHHHhCC------------------CCCC----CCHHHHhhcC
Q 018506 46 ESVGFIGLGNMGFR-MASNLMKAGYKMAVHDVNCNVMKMFSDMG------------------VPTK----ETPFEVAEAS 102 (355)
Q Consensus 46 mkIgiIG~G~mG~~-ia~~L~~~G~~V~v~dr~~~~~~~l~~~g------------------~~~~----~s~~e~~~~a 102 (355)
||+-.+|+|++|++ ++..|.++|++|+..|++.+.++.+++.+ +... ...-+++.++
T Consensus 1 mkavhfGaGniGRGfig~~l~~~g~~v~f~dv~~~~i~~Ln~~~~Y~V~~~g~~~~~~~v~~v~ai~s~~~~~~~~i~~a 80 (382)
T 3h2z_A 1 MKALHFGAGNIGRGFIGKLLADAGIQLTFADVNQVVLDALNARHSYQVHVVGETEQVDTVSGVNAVSSIGDDVVDLIAQV 80 (382)
T ss_dssp CEEEEECCSHHHHHTHHHHHHHTTCEEEEEESCHHHHHHHHHHSEEEEEEESSSEEEEEEESCEEEETTSSHHHHHHTTC
T ss_pred CcEEEECCCccchhhHHHHHHHcCCeEEEEeCCHHHHHHHhcCCCEEEEEccCCcceEEEEEEEEEeCcHHHHHHHHcCC
Confidence 78999999999955 55567789999999999999999998642 1111 1244467799
Q ss_pred CEEEEeCCCchHHHHHh
Q 018506 103 DVVITMLPSSSHVLDVY 119 (355)
Q Consensus 103 DiVi~~v~~~~~~~~vl 119 (355)
|+|.+++. +..++.+.
T Consensus 81 dlitT~vG-~~~l~~i~ 96 (382)
T 3h2z_A 81 DLVTTAVG-PVVLERIA 96 (382)
T ss_dssp SEEEECCC-HHHHHHTH
T ss_pred CEEEECCC-cccHHHHH
Confidence 99988885 45555544
No 411
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=95.62 E-value=0.016 Score=55.16 Aligned_cols=93 Identities=15% Similarity=0.181 Sum_probs=61.7
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCC---cEEEEe----CC----hh-H---HHH----HHhC-CCC-CCCCHHHHhhcC
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGY---KMAVHD----VN----CN-V---MKM----FSDM-GVP-TKETPFEVAEAS 102 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~---~V~v~d----r~----~~-~---~~~----l~~~-g~~-~~~s~~e~~~~a 102 (355)
...||.|+|+|.+|.+++..|.+.|. +|+++| |+ .+ . +.. +... +.. ...++.++++.+
T Consensus 185 ~~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd~~~~R~G~~~~a~~~~~L~~~~~~~a~~~~~~~~~~~L~e~l~~a 264 (439)
T 2dvm_A 185 SEITLALFGAGAAGFATLRILTEAGVKPENVRVVELVNGKPRILTSDLDLEKLFPYRGWLLKKTNGENIEGGPQEALKDA 264 (439)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEEEETTEEEECCTTSCHHHHSTTCHHHHTTSCTTCCCSSHHHHHTTC
T ss_pred cCCEEEEECccHHHHHHHHHHHHcCCCcCeEEEEEccCCCcCccccccchhHHHHHHHHHhhccccccccccHHHHhccC
Confidence 44689999999999999999999997 799999 87 32 2 211 1111 111 245688899999
Q ss_pred CEEEEeCCC--chHHHHHhcCCCccccCCCCCCCeEEEEcCCCCH
Q 018506 103 DVVITMLPS--SSHVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDP 145 (355)
Q Consensus 103 DiVi~~v~~--~~~~~~vl~~~~~~l~~~~~~~~~ivi~~st~~~ 145 (355)
|++|-+++. ...-+..+. .+. ++.+|+|+++-.+
T Consensus 265 DVlInaT~~~~G~~~~e~v~----~m~-----~~~iVfDLynP~~ 300 (439)
T 2dvm_A 265 DVLISFTRPGPGVIKPQWIE----KMN-----EDAIVFPLANPVP 300 (439)
T ss_dssp SEEEECSCCCSSSSCHHHHT----TSC-----TTCEEEECCSSSC
T ss_pred CEEEEcCCCccCCCChHHHH----hcC-----CCCEEEECCCCCC
Confidence 999999886 211122222 121 3459999955443
No 412
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=95.59 E-value=0.054 Score=50.40 Aligned_cols=46 Identities=20% Similarity=0.293 Sum_probs=40.5
Q ss_pred CceEEEEcccHHhHHHHHHHHHCCC-cEEEEeCChhHHHHHHhCCCC
Q 018506 45 FESVGFIGLGNMGFRMASNLMKAGY-KMAVHDVNCNVMKMFSDMGVP 90 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~~G~-~V~v~dr~~~~~~~l~~~g~~ 90 (355)
-.+|.|+|+|.+|...++.+...|. +|++.++++++.+.+++.|+.
T Consensus 196 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~ 242 (376)
T 1e3i_A 196 GSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGAT 242 (376)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCc
Confidence 3579999999999999999988998 799999999999888877764
No 413
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=95.56 E-value=0.014 Score=52.81 Aligned_cols=60 Identities=15% Similarity=0.093 Sum_probs=44.4
Q ss_pred CCceEEEEc-ccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhh--cCCEEEEeCC
Q 018506 44 QFESVGFIG-LGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAE--ASDVVITMLP 110 (355)
Q Consensus 44 ~~mkIgiIG-~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~--~aDiVi~~v~ 110 (355)
..|+|.|.| .|.+|+.++..|.+.||+|++.+|+.. ..+.-..+..++++ .+|+||-+..
T Consensus 2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~~-------~D~~d~~~~~~~~~~~~~d~vih~a~ 64 (321)
T 1e6u_A 2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE-------LNLLDSRAVHDFFASERIDQVYLAAA 64 (321)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTT-------CCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCcc-------CCccCHHHHHHHHHhcCCCEEEEcCe
Confidence 357899998 599999999999999999999887631 11111223445666 8999998753
No 414
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=95.55 E-value=0.037 Score=49.07 Aligned_cols=43 Identities=14% Similarity=0.154 Sum_probs=35.1
Q ss_pred CCCceEEEE-cccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHH
Q 018506 43 CQFESVGFI-GLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFS 85 (355)
Q Consensus 43 ~~~mkIgiI-G~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~ 85 (355)
+..++|-|. |.|.+|..+++.|++.|++|++.+|++++.+.+.
T Consensus 30 l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~ 73 (279)
T 1xg5_A 30 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELA 73 (279)
T ss_dssp GTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHH
Confidence 344556666 6799999999999999999999999988776543
No 415
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=95.55 E-value=0.035 Score=50.55 Aligned_cols=66 Identities=20% Similarity=0.245 Sum_probs=45.1
Q ss_pred CCceEEEEc-ccHHhHHHHHHHHHCCCcEEEEeCChhHH---HHHHhC------------CCCCCCCHHHHhhcCCEEEE
Q 018506 44 QFESVGFIG-LGNMGFRMASNLMKAGYKMAVHDVNCNVM---KMFSDM------------GVPTKETPFEVAEASDVVIT 107 (355)
Q Consensus 44 ~~mkIgiIG-~G~mG~~ia~~L~~~G~~V~v~dr~~~~~---~~l~~~------------g~~~~~s~~e~~~~aDiVi~ 107 (355)
++++|.|.| +|.+|+.++..|++.||+|++..|+++.. ..+.+. .+.-..+..++++.+|+||-
T Consensus 4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih 83 (337)
T 2c29_D 4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTGVFH 83 (337)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTCSEEEE
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCCCEEEE
Confidence 346788887 89999999999999999999988887632 222110 11222345566777888776
Q ss_pred eC
Q 018506 108 ML 109 (355)
Q Consensus 108 ~v 109 (355)
+.
T Consensus 84 ~A 85 (337)
T 2c29_D 84 VA 85 (337)
T ss_dssp CC
T ss_pred ec
Confidence 53
No 416
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=95.54 E-value=0.01 Score=56.73 Aligned_cols=65 Identities=22% Similarity=0.206 Sum_probs=48.3
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHH--HHHHhCCCCCC--CCHHHHhhcCCEEEEeC
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVM--KMFSDMGVPTK--ETPFEVAEASDVVITML 109 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~--~~l~~~g~~~~--~s~~e~~~~aDiVi~~v 109 (355)
+.+||.|||+|..|.+.|+.|.+.||+|+++|...... ..+. .|+.+. ....+.++.+|.||++.
T Consensus 4 ~~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~~~~~l~-~G~~~~~g~~~~~~~~~~d~vV~s~ 72 (439)
T 2x5o_A 4 QGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLP-EAVERHTGSLNDEWLMAADLIVASP 72 (439)
T ss_dssp TTCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCTTGGGSC-TTSCEEESSCCHHHHHTCSEEEECT
T ss_pred CCCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcchhHHhh-CCCEEEECCCcHHHhccCCEEEeCC
Confidence 34789999999999999999999999999999754321 3344 566542 22355666899999873
No 417
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=95.53 E-value=0.048 Score=50.65 Aligned_cols=75 Identities=15% Similarity=0.203 Sum_probs=52.9
Q ss_pred CceEEEEcccHHhHHHHHHHHHCCC-cEEEEeCChhHHHHHHhCCCCCCC-------CHHHHhh-----cCCEEEEeCCC
Q 018506 45 FESVGFIGLGNMGFRMASNLMKAGY-KMAVHDVNCNVMKMFSDMGVPTKE-------TPFEVAE-----ASDVVITMLPS 111 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~~G~-~V~v~dr~~~~~~~l~~~g~~~~~-------s~~e~~~-----~aDiVi~~v~~ 111 (355)
-.+|.|+|+|.+|...++.+...|. +|++.++++++.+.+++.|+..+- +..+.+. ..|+||-++..
T Consensus 192 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~t~gg~Dvvid~~g~ 271 (373)
T 1p0f_A 192 GSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGR 271 (373)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCCCEEEECCCC
Confidence 3579999999999999998888898 799999999999888887764221 2222221 35777766655
Q ss_pred chHHHHHh
Q 018506 112 SSHVLDVY 119 (355)
Q Consensus 112 ~~~~~~vl 119 (355)
+..++..+
T Consensus 272 ~~~~~~~~ 279 (373)
T 1p0f_A 272 IETMMNAL 279 (373)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 43444433
No 418
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=95.53 E-value=0.036 Score=49.19 Aligned_cols=82 Identities=12% Similarity=0.182 Sum_probs=52.3
Q ss_pred eEEEE--cccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEE--eCCCchHHHHHhcCC
Q 018506 47 SVGFI--GLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVIT--MLPSSSHVLDVYNGP 122 (355)
Q Consensus 47 kIgiI--G~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~--~v~~~~~~~~vl~~~ 122 (355)
|+.+| |.|.+|.++++.|++.|++|++.+|++++.+.+.+. +-...++.++ =+.++.+++.++...
T Consensus 22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~----------~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 91 (272)
T 2nwq_A 22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGE----------LSAKTRVLPLTLDVRDRAAMSAAVDNL 91 (272)
T ss_dssp CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----------HTTTSCEEEEECCTTCHHHHHHHHHTC
T ss_pred cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH----------hhcCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 55555 678999999999999999999999998887665431 0000223332 255666777777664
Q ss_pred CccccCCCCCCCeEEEEcCCC
Q 018506 123 NGLLQGGNSVRPQLLIDSSTI 143 (355)
Q Consensus 123 ~~~l~~~~~~~~~ivi~~st~ 143 (355)
...+.. + .++|+....
T Consensus 92 ~~~~g~---i--D~lvnnAG~ 107 (272)
T 2nwq_A 92 PEEFAT---L--RGLINNAGL 107 (272)
T ss_dssp CGGGSS---C--CEEEECCCC
T ss_pred HHHhCC---C--CEEEECCCC
Confidence 332211 1 367766543
No 419
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=95.52 E-value=0.031 Score=48.72 Aligned_cols=40 Identities=20% Similarity=0.297 Sum_probs=34.0
Q ss_pred eEEEE-cccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHh
Q 018506 47 SVGFI-GLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSD 86 (355)
Q Consensus 47 kIgiI-G~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~ 86 (355)
+|-|. |.|.+|.++++.|++.|++|++.+|++++.+.+.+
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~ 44 (247)
T 3dii_A 4 GVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAK 44 (247)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHT
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 34444 56899999999999999999999999988877765
No 420
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=95.51 E-value=0.011 Score=54.71 Aligned_cols=52 Identities=12% Similarity=0.145 Sum_probs=41.4
Q ss_pred ceEEEEc-ccHHhHHHHHHHHHCCC-cEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeC
Q 018506 46 ESVGFIG-LGNMGFRMASNLMKAGY-KMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITML 109 (355)
Q Consensus 46 mkIgiIG-~G~mG~~ia~~L~~~G~-~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v 109 (355)
|||.|.| .|.+|+.++..|.+.|+ +|+..||+.+ ..+..++++++|+||-+.
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~~d------------~~~l~~~~~~~d~Vih~a 54 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQTK------------EEELESALLKADFIVHLA 54 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTTCC------------HHHHHHHHHHCSEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCCCC------------HHHHHHHhccCCEEEECC
Confidence 7899998 79999999999999999 9999999411 123345556789998775
No 421
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=95.50 E-value=0.016 Score=52.88 Aligned_cols=37 Identities=24% Similarity=0.376 Sum_probs=32.3
Q ss_pred CCceEEEEc-ccHHhHHHHHHHHHCCCcEEEEeCChhH
Q 018506 44 QFESVGFIG-LGNMGFRMASNLMKAGYKMAVHDVNCNV 80 (355)
Q Consensus 44 ~~mkIgiIG-~G~mG~~ia~~L~~~G~~V~v~dr~~~~ 80 (355)
..|+|-|.| .|.+|+.++..|++.|++|++.+|+++.
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~ 41 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNS 41 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSS
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcc
Confidence 347899997 6999999999999999999999987654
No 422
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=95.48 E-value=0.11 Score=50.17 Aligned_cols=128 Identities=9% Similarity=0.130 Sum_probs=83.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cCCCHHHHHHHHHhcC-CCcccccCCCCCCCcccCCCC--CCCC
Q 018506 221 GNGAAAKICNNLTMAVSMLGVSEALTLGQS------LGISASTLTKILNSSS-ARCWSSDSYNPVPGVMEGVPA--SRNY 291 (355)
Q Consensus 221 g~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~------~Gi~~~~~~~~~~~~~-~~s~~~~~~~~~~~~~~~~~~--~~~~ 291 (355)
+.++.+|++.|.+.+..+.+.+|.+.+.++ .++|..++.++.+.|+ -.+|..+.. ...+...+. +--+
T Consensus 317 ~~~~~~~~v~~al~~~~~~~yaqGf~ll~~a~~~~~~~l~~~~ia~~wr~Gciirs~~l~~i---~~a~~~~~~l~~l~~ 393 (474)
T 2iz1_A 317 DKKEVIEKIRKALYFSKIMSYAQGFAQLRKASEEFDWDLPYGTIAQIWRAGCIIRAEFLQNI---TDAFDKDSELENLLL 393 (474)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHTSSSCTTCBTTHHHH---HHHHHHCTTCCCGGG
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHhccchHHHHHHHHH---HHHHhcCCChhhhhc
Confidence 778999999999999999999999999766 7899999999998776 355544310 000111000 0001
Q ss_pred CCCcc--hhhHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHCCCCCCcHHHHHHHHhcCC
Q 018506 292 GGGFA--SKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENGHDSKDFSCVFQHYYGGK 352 (355)
Q Consensus 292 ~~~~~--~~~~~kd~~~~~~~a~~~gv~~pi~~~~~~~~~~~~~~g~g~~d~~~~~~~~~~~~ 352 (355)
++-|. +.......+.++..|-+.|+|+|.+.++...|..-....... -.-...|-+|++|
T Consensus 394 ~~~~~~~~~~~~~~~r~~v~~a~~~~~p~p~~s~al~~~~~~~~~~~~~-~l~qa~rd~fg~h 455 (474)
T 2iz1_A 394 DDYFVDITKRYQEAVRDVVSLAVQAGTPIPTFTSAISYYDSYRSENLPA-NLIQAQRDYFGAH 455 (474)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHTCSSCTH-HHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcccCCchh-hHHHHHHHhcCCc
Confidence 11121 233345578899999999999999999999655443333222 3333334455554
No 423
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=95.47 E-value=0.011 Score=53.20 Aligned_cols=37 Identities=22% Similarity=0.329 Sum_probs=33.0
Q ss_pred ceEEEEcc-cHHhHHHHHHHHHCCCcEEEEeCChhHHH
Q 018506 46 ESVGFIGL-GNMGFRMASNLMKAGYKMAVHDVNCNVMK 82 (355)
Q Consensus 46 mkIgiIG~-G~mG~~ia~~L~~~G~~V~v~dr~~~~~~ 82 (355)
|||.|.|+ |.+|+.++..|++.||+|++.+|+++...
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~ 38 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRR 38 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCG
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCch
Confidence 68999987 99999999999999999999999776543
No 424
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=95.47 E-value=0.028 Score=51.21 Aligned_cols=33 Identities=24% Similarity=0.325 Sum_probs=29.7
Q ss_pred CceEEEEc-ccHHhHHHHHHHHHCCCcEEEEeCC
Q 018506 45 FESVGFIG-LGNMGFRMASNLMKAGYKMAVHDVN 77 (355)
Q Consensus 45 ~mkIgiIG-~G~mG~~ia~~L~~~G~~V~v~dr~ 77 (355)
||+|.|.| .|.+|+.++..|++.|++|++.+|+
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~ 34 (347)
T 1orr_A 1 MAKLLITGGCGFLGSNLASFALSQGIDLIVFDNL 34 (347)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CcEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCC
Confidence 57899997 6999999999999999999999874
No 425
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=95.45 E-value=0.042 Score=50.40 Aligned_cols=45 Identities=18% Similarity=0.340 Sum_probs=40.3
Q ss_pred CceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCC
Q 018506 45 FESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGV 89 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~ 89 (355)
..+|.|+|+|.+|...++.+...|.+|++.++++++.+.+.+.|+
T Consensus 165 g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa 209 (339)
T 1rjw_A 165 GEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGA 209 (339)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCC
Confidence 468999999999999999999999999999999999888777664
No 426
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=95.44 E-value=0.013 Score=53.32 Aligned_cols=37 Identities=22% Similarity=0.278 Sum_probs=32.6
Q ss_pred CCceEEEEcc-cHHhHHHHHHHHHCCCcEEEEeCChhH
Q 018506 44 QFESVGFIGL-GNMGFRMASNLMKAGYKMAVHDVNCNV 80 (355)
Q Consensus 44 ~~mkIgiIG~-G~mG~~ia~~L~~~G~~V~v~dr~~~~ 80 (355)
+.|+|.|.|+ |.+|+.++..|++.||+|++.+|++++
T Consensus 2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~ 39 (345)
T 2z1m_A 2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGE 39 (345)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCST
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcc
Confidence 3478999986 999999999999999999999998754
No 427
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=95.43 E-value=0.018 Score=52.38 Aligned_cols=65 Identities=11% Similarity=0.112 Sum_probs=46.1
Q ss_pred CceEEEEc-ccHHhHHHHHHHHHCCCcEEEEeCChhHH------HHHHh-CC-------CCCCCCHHHHhhcCCEEEEeC
Q 018506 45 FESVGFIG-LGNMGFRMASNLMKAGYKMAVHDVNCNVM------KMFSD-MG-------VPTKETPFEVAEASDVVITML 109 (355)
Q Consensus 45 ~mkIgiIG-~G~mG~~ia~~L~~~G~~V~v~dr~~~~~------~~l~~-~g-------~~~~~s~~e~~~~aDiVi~~v 109 (355)
.|+|.|.| +|.+|+.++..|++.||+|.+..|+++.. ..+.. .+ +.-..+..++++.+|+||-+.
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~A 88 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIAGCDFVFHVA 88 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHTTCSEEEEES
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHcCCCEEEEeC
Confidence 47899998 79999999999999999999888876532 12211 11 122234566777889888654
No 428
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=95.39 E-value=0.13 Score=49.75 Aligned_cols=128 Identities=12% Similarity=0.141 Sum_probs=83.2
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cCCCHHHHHHHHHhcC-CCcccccCCCCCCCcccCCCC--CCCC
Q 018506 221 GNGAAAKICNNLTMAVSMLGVSEALTLGQS------LGISASTLTKILNSSS-ARCWSSDSYNPVPGVMEGVPA--SRNY 291 (355)
Q Consensus 221 g~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~------~Gi~~~~~~~~~~~~~-~~s~~~~~~~~~~~~~~~~~~--~~~~ 291 (355)
+.+..+|++.|.+.+..+.+.+|.+.+.++ .++|..++.++.+.|+ -.+|..+.. ...+...+. +--+
T Consensus 322 ~~~~~~~~v~~al~~~~i~syaqGf~ll~~as~~~~w~l~~~~ia~iwr~GciIrs~~l~~i---~~a~~~~~~l~~l~~ 398 (497)
T 2p4q_A 322 DREQFVDDLEQALYASKIISYAQGFMLIREAAATYGWKLNNPAIALMWRGGCIIRSVFLGQI---TKAYREEPDLENLLF 398 (497)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHSSSTTCBHHHHHH---HHHHHHCTTCSCGGG
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHhcCCchHHHHHHHH---HHHHhcCCChhhhhc
Confidence 478999999999999999999999999776 7899999999999876 355544310 000111000 0001
Q ss_pred CCCcc--hhhHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHCCCCCCcHHHHHHHHhcCC
Q 018506 292 GGGFA--SKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENGHDSKDFSCVFQHYYGGK 352 (355)
Q Consensus 292 ~~~~~--~~~~~kd~~~~~~~a~~~gv~~pi~~~~~~~~~~~~~~g~g~~d~~~~~~~~~~~~ 352 (355)
++-|. +.......+.++..|-+.|+|+|.+.++...|..-....... -.-...|-+|++|
T Consensus 399 ~~~f~~~~~~~~~~~r~~v~~a~~~gvp~P~~s~aL~~~~~~~~~~~~a-~liqa~Rd~FG~H 460 (497)
T 2p4q_A 399 NKFFADAVTKAQSGWRKSIALATTYGIPTPAFSTALSFYDGYRSERLPA-NLLQAQRDYFGAH 460 (497)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHTCSSCTH-HHHHHHHHHHSCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcccCCchh-HHHHHHHHhcCCc
Confidence 11121 233344578899999999999999999999655443333322 3333334466554
No 429
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=95.38 E-value=0.064 Score=49.80 Aligned_cols=46 Identities=20% Similarity=0.306 Sum_probs=40.5
Q ss_pred CceEEEEcccHHhHHHHHHHHHCCC-cEEEEeCChhHHHHHHhCCCC
Q 018506 45 FESVGFIGLGNMGFRMASNLMKAGY-KMAVHDVNCNVMKMFSDMGVP 90 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~~G~-~V~v~dr~~~~~~~l~~~g~~ 90 (355)
-.+|.|+|+|.+|...++.+...|. +|++.++++++.+.+++.|+.
T Consensus 193 g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~ 239 (374)
T 1cdo_A 193 GSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGAT 239 (374)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCc
Confidence 3579999999999999999988998 799999999999888877754
No 430
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=95.38 E-value=0.016 Score=51.10 Aligned_cols=40 Identities=18% Similarity=0.383 Sum_probs=35.5
Q ss_pred ceEEEE--cccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHH
Q 018506 46 ESVGFI--GLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFS 85 (355)
Q Consensus 46 mkIgiI--G~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~ 85 (355)
-|+++| |.+.+|.++|+.|++.|.+|.+.+|+++++++..
T Consensus 9 gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~ 50 (255)
T 4g81_D 9 GKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESV 50 (255)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence 478888 8889999999999999999999999998876654
No 431
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=95.38 E-value=0.037 Score=48.90 Aligned_cols=40 Identities=15% Similarity=0.216 Sum_probs=33.3
Q ss_pred ceEEEE-cccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHH
Q 018506 46 ESVGFI-GLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFS 85 (355)
Q Consensus 46 mkIgiI-G~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~ 85 (355)
+++-|. |.|.+|.++++.|++.|+.|.+.+|++++.+.+.
T Consensus 28 k~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~ 68 (266)
T 3grp_A 28 RKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIA 68 (266)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 344444 6789999999999999999999999998877654
No 432
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=95.36 E-value=0.051 Score=50.49 Aligned_cols=46 Identities=20% Similarity=0.335 Sum_probs=40.3
Q ss_pred CceEEEEcccHHhHHHHHHHHHCCC-cEEEEeCChhHHHHHHhCCCC
Q 018506 45 FESVGFIGLGNMGFRMASNLMKAGY-KMAVHDVNCNVMKMFSDMGVP 90 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~~G~-~V~v~dr~~~~~~~l~~~g~~ 90 (355)
-.+|.|+|+|.+|...++.+...|. +|++.++++++.+.+++.|+.
T Consensus 192 g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~ 238 (374)
T 2jhf_A 192 GSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGAT 238 (374)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCc
Confidence 3579999999999999999988998 799999999999888877754
No 433
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=95.35 E-value=0.011 Score=54.91 Aligned_cols=68 Identities=18% Similarity=0.178 Sum_probs=45.8
Q ss_pred CCCceEEEEcc-cHHhHHHHHHHHHCC-CcEEEEeCChhHHH-HHH-hCCC-----CCC--CCHHHHhhcCCEEEEeCC
Q 018506 43 CQFESVGFIGL-GNMGFRMASNLMKAG-YKMAVHDVNCNVMK-MFS-DMGV-----PTK--ETPFEVAEASDVVITMLP 110 (355)
Q Consensus 43 ~~~mkIgiIG~-G~mG~~ia~~L~~~G-~~V~v~dr~~~~~~-~l~-~~g~-----~~~--~s~~e~~~~aDiVi~~v~ 110 (355)
..+|+|.|.|+ |.+|+.++..|++.| ++|++.+|+++... .+. ..++ ... .+..++++.+|+||-+..
T Consensus 30 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vih~A~ 108 (377)
T 2q1s_A 30 LANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQDEYDYVFHLAT 108 (377)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCCSCCSEEEECCC
T ss_pred hCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHHhhCCCEEEECCC
Confidence 45689999985 999999999999999 99999999765421 111 1111 111 123344557888887753
No 434
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=95.35 E-value=0.044 Score=48.41 Aligned_cols=43 Identities=19% Similarity=0.084 Sum_probs=35.2
Q ss_pred CCCceEEEE-cccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHH
Q 018506 43 CQFESVGFI-GLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFS 85 (355)
Q Consensus 43 ~~~mkIgiI-G~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~ 85 (355)
+..++|-|. |.|.+|..+++.|++.|++|++.+|++++.+.+.
T Consensus 29 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~ 72 (272)
T 1yb1_A 29 VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETA 72 (272)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHH
Confidence 344567777 5789999999999999999999999988766543
No 435
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=95.35 E-value=0.025 Score=50.20 Aligned_cols=41 Identities=17% Similarity=0.294 Sum_probs=34.4
Q ss_pred ceEEEE--cccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHh
Q 018506 46 ESVGFI--GLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSD 86 (355)
Q Consensus 46 mkIgiI--G~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~ 86 (355)
.|+.+| |.|.+|.++++.|++.|++|++.+|++++.+.+.+
T Consensus 28 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~ 70 (272)
T 4dyv_A 28 KKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAA 70 (272)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence 455555 56899999999999999999999999988776653
No 436
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=95.35 E-value=0.0092 Score=55.61 Aligned_cols=91 Identities=18% Similarity=0.245 Sum_probs=51.5
Q ss_pred CceEEEEc-ccHHhHHHHH-HHHHCCCc---EEEEe-CChhH-HHHHHhCCCCCC--CCHHHHhhcCCEEEEeCCCchHH
Q 018506 45 FESVGFIG-LGNMGFRMAS-NLMKAGYK---MAVHD-VNCNV-MKMFSDMGVPTK--ETPFEVAEASDVVITMLPSSSHV 115 (355)
Q Consensus 45 ~mkIgiIG-~G~mG~~ia~-~L~~~G~~---V~v~d-r~~~~-~~~l~~~g~~~~--~s~~e~~~~aDiVi~~v~~~~~~ 115 (355)
|+||+|+| .|.+|..+.+ .|.+.+++ +..+. ++..+ +..+....+... .++++ .+++|+||.|+|.. ..
T Consensus 1 m~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~s~G~~v~~~~g~~i~~~~~~~~~~-~~~~DvVf~a~g~~-~s 78 (367)
T 1t4b_A 1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGGTTGTLQDAFDLEA-LKALDIIVTCQGGD-YT 78 (367)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGGTCCCBCEETTCHHH-HHTCSEEEECSCHH-HH
T ss_pred CcEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeCCCCCCccccCCCceEEEecCChHH-hcCCCEEEECCCch-hH
Confidence 57999999 9999999999 55555543 33333 22221 111221222222 23444 47899999999864 33
Q ss_pred HHHhcCCCccccCCCCCCCeEEEEcCCC
Q 018506 116 LDVYNGPNGLLQGGNSVRPQLLIDSSTI 143 (355)
Q Consensus 116 ~~vl~~~~~~l~~~~~~~~~ivi~~st~ 143 (355)
++.... +++.+ ...+|||.|+.
T Consensus 79 ~~~a~~---~~~~G---~k~vVID~ss~ 100 (367)
T 1t4b_A 79 NEIYPK---LRESG---WQGYWIDAASS 100 (367)
T ss_dssp HHHHHH---HHHTT---CCCEEEECSST
T ss_pred HHHHHH---HHHCC---CCEEEEcCChh
Confidence 333322 23211 11389998875
No 437
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=95.34 E-value=0.016 Score=54.37 Aligned_cols=36 Identities=28% Similarity=0.429 Sum_probs=32.6
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChh
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCN 79 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~ 79 (355)
..++|.|||.|..|..+|..|++.|++|+++++++.
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 60 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDND 60 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 346899999999999999999999999999998754
No 438
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=95.33 E-value=0.032 Score=51.49 Aligned_cols=33 Identities=15% Similarity=0.258 Sum_probs=25.3
Q ss_pred CCCceEEEEcccHHhHHHHHHHHHC-CCcEEEEe
Q 018506 43 CQFESVGFIGLGNMGFRMASNLMKA-GYKMAVHD 75 (355)
Q Consensus 43 ~~~mkIgiIG~G~mG~~ia~~L~~~-G~~V~v~d 75 (355)
+.|+||||+|.|.+|.-+.+.|.+. ..+|...+
T Consensus 15 ~~~ikVgI~G~G~iGr~llR~l~~~p~veivain 48 (354)
T 3cps_A 15 YFQGTLGINGFGRIGRLVLRACMERNDITVVAIN 48 (354)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHTCSSCEEEEEE
T ss_pred CcceEEEEECCCHHHHHHHHHHHcCCCeEEEEec
Confidence 3567999999999999999999876 46765443
No 439
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=95.32 E-value=0.016 Score=52.99 Aligned_cols=34 Identities=18% Similarity=0.273 Sum_probs=30.8
Q ss_pred CceEEEEc-ccHHhHHHHHHHHHC--CCcEEEEeCCh
Q 018506 45 FESVGFIG-LGNMGFRMASNLMKA--GYKMAVHDVNC 78 (355)
Q Consensus 45 ~mkIgiIG-~G~mG~~ia~~L~~~--G~~V~v~dr~~ 78 (355)
||+|.|.| .|.+|+.++..|++. |++|++.+|++
T Consensus 4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~ 40 (348)
T 1oc2_A 4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLT 40 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCC
T ss_pred CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 57899997 699999999999998 89999999864
No 440
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=95.32 E-value=0.054 Score=47.13 Aligned_cols=41 Identities=20% Similarity=0.260 Sum_probs=33.9
Q ss_pred ceEEEE-cccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHh
Q 018506 46 ESVGFI-GLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSD 86 (355)
Q Consensus 46 mkIgiI-G~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~ 86 (355)
+++-|. |.|.+|..+++.|++.|++|++.+|++++.+.+.+
T Consensus 10 k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~ 51 (253)
T 3qiv_A 10 KVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAK 51 (253)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence 345555 56899999999999999999999999988776543
No 441
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=95.29 E-value=0.0096 Score=55.65 Aligned_cols=85 Identities=22% Similarity=0.225 Sum_probs=56.3
Q ss_pred CceEEEEcc-cHHhHHHHHHHHHCCC---cEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHHHHhc
Q 018506 45 FESVGFIGL-GNMGFRMASNLMKAGY---KMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYN 120 (355)
Q Consensus 45 ~mkIgiIG~-G~mG~~ia~~L~~~G~---~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl~ 120 (355)
..||.|||. |..|..-+..+...|. +|++||+++.. .|... +.+..+|+||-|+.-......++.
T Consensus 214 ~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~~~------~g~~~-----~~i~~aDivIn~vlig~~aP~Lvt 282 (394)
T 2qrj_A 214 KPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKETS------RGGPF-----DEIPQADIFINCIYLSKPIAPFTN 282 (394)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHHHT------TCSCC-----THHHHSSEEEECCCCCSSCCCSCC
T ss_pred CCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeeccccc------cCCch-----hhHhhCCEEEECcCcCCCCCcccC
Confidence 468999999 9999999999999998 89999987622 13322 345699999999863211001111
Q ss_pred CCCccccCCCCCCCeEEEEcCCC
Q 018506 121 GPNGLLQGGNSVRPQLLIDSSTI 143 (355)
Q Consensus 121 ~~~~~l~~~~~~~~~ivi~~st~ 143 (355)
.+.++.+ ..++.+|||.+--
T Consensus 283 --~e~v~~m-~k~gsVIVDVA~D 302 (394)
T 2qrj_A 283 --MEKLNNP-NRRLRTVVDVSAD 302 (394)
T ss_dssp --HHHHCCT-TCCCCEEEETTCC
T ss_pred --HHHHhcC-cCCCeEEEEEecC
Confidence 1122222 1256799998753
No 442
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=95.29 E-value=0.0082 Score=54.55 Aligned_cols=65 Identities=17% Similarity=0.214 Sum_probs=44.0
Q ss_pred CceEEEEc-ccHHhHHHHHHHHHCCCcEEEEeCChhHHH-HHHhCCC-----CCC--CCHHHHhh--cCCEEEEeCC
Q 018506 45 FESVGFIG-LGNMGFRMASNLMKAGYKMAVHDVNCNVMK-MFSDMGV-----PTK--ETPFEVAE--ASDVVITMLP 110 (355)
Q Consensus 45 ~mkIgiIG-~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~-~l~~~g~-----~~~--~s~~e~~~--~aDiVi~~v~ 110 (355)
||+|.|.| .|.+|+.++..|++.||+|++.+|++.... .+. .++ ... .+..++++ .+|+||-+..
T Consensus 1 M~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~d~vih~a~ 76 (330)
T 2c20_A 1 MNSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAIT-EGAKFYNGDLRDKAFLRDVFTQENIEAVMHFAA 76 (330)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSC-TTSEEEECCTTCHHHHHHHHHHSCEEEEEECCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchhhcC-CCcEEEECCCCCHHHHHHHHhhcCCCEEEECCc
Confidence 57899996 599999999999999999999998654321 111 111 111 12344555 7888887753
No 443
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=95.28 E-value=0.022 Score=52.28 Aligned_cols=35 Identities=23% Similarity=0.368 Sum_probs=31.3
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCC-cEEEEeCCh
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGY-KMAVHDVNC 78 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~-~V~v~dr~~ 78 (355)
...||.|||+|..|+.++..|+..|. +++++|++.
T Consensus 33 ~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~ 68 (340)
T 3rui_A 33 KNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 68 (340)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred hCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCE
Confidence 35789999999999999999999996 689998865
No 444
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=95.28 E-value=0.014 Score=53.75 Aligned_cols=67 Identities=16% Similarity=0.158 Sum_probs=46.3
Q ss_pred CCceEEEEc-ccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHh-----CCC-----CCC--CCHHHHhhc--CCEEEEe
Q 018506 44 QFESVGFIG-LGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSD-----MGV-----PTK--ETPFEVAEA--SDVVITM 108 (355)
Q Consensus 44 ~~mkIgiIG-~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~-----~g~-----~~~--~s~~e~~~~--aDiVi~~ 108 (355)
..|+|.|.| .|.+|+.++..|.+.||+|++.+|++++.+.+.+ .++ ... .+..++++. .|+||-+
T Consensus 8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 87 (357)
T 1rkx_A 8 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHM 87 (357)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhcCCCEEEEC
Confidence 457899997 6999999999999999999999998765432221 111 111 123344544 7999887
Q ss_pred CC
Q 018506 109 LP 110 (355)
Q Consensus 109 v~ 110 (355)
..
T Consensus 88 A~ 89 (357)
T 1rkx_A 88 AA 89 (357)
T ss_dssp CS
T ss_pred CC
Confidence 64
No 445
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=95.27 E-value=0.03 Score=49.87 Aligned_cols=41 Identities=12% Similarity=0.263 Sum_probs=36.0
Q ss_pred ceEEEE--cccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHh
Q 018506 46 ESVGFI--GLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSD 86 (355)
Q Consensus 46 mkIgiI--G~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~ 86 (355)
-|+++| |.+.+|.++|+.|++.|.+|.+.+|+.+++++..+
T Consensus 29 gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~ 71 (273)
T 4fgs_A 29 AKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIA 71 (273)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence 478888 67789999999999999999999999998876643
No 446
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=95.27 E-value=0.099 Score=50.44 Aligned_cols=128 Identities=12% Similarity=0.128 Sum_probs=83.9
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cCCCHHHHHHHHHhcC-CCcccccCCCCCCCcccCCCC--CCCC
Q 018506 221 GNGAAAKICNNLTMAVSMLGVSEALTLGQS------LGISASTLTKILNSSS-ARCWSSDSYNPVPGVMEGVPA--SRNY 291 (355)
Q Consensus 221 g~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~------~Gi~~~~~~~~~~~~~-~~s~~~~~~~~~~~~~~~~~~--~~~~ 291 (355)
+.+..+|++.|.+.+..+.+.+|.+.+.++ .++|..++.++.+.|+ -.+|..+.. ...+...+. +--+
T Consensus 325 ~~~~~~~~v~~al~~~~~~syaqGf~ll~~as~~~~w~l~~~~ia~iwr~GciIrs~~l~~i---~~a~~~~~~l~~l~~ 401 (480)
T 2zyd_A 325 DKAEFIEKVRRALYLGKIVSYAQGFSQLRAASEEYNWDLNYGEIAKIFRAGCIIRAQFLQKI---TDACAENPQIANLLL 401 (480)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHTSSSSTTCBTHHHHH---HHHHHHCTTCSCGGG
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHhcCcchHHHHHHHH---HHHHhcCCChHhhhc
Confidence 778999999999999999999999999776 7899999999999776 355544310 000111000 0001
Q ss_pred CCCcc--hhhHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHCCCCCCcHHHHHHHHhcCC
Q 018506 292 GGGFA--SKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENGHDSKDFSCVFQHYYGGK 352 (355)
Q Consensus 292 ~~~~~--~~~~~kd~~~~~~~a~~~gv~~pi~~~~~~~~~~~~~~g~g~~d~~~~~~~~~~~~ 352 (355)
++-|. +.......+.++..|-+.|+|+|.+.++...|..-....... -.-...|-+|+++
T Consensus 402 ~~~f~~~~~~~~~~~r~~v~~a~~~gvp~p~~s~al~~~~~~~~~~~~~-~l~qa~Rd~FG~H 463 (480)
T 2zyd_A 402 APYFKQIADDYQQALRDVVAYAVQNGIPVPTFSAAVAYYDSYRAAVLPA-NLIQAQRDYFGAH 463 (480)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHTCSSCTH-HHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcccCCchh-hHHHHHHHhcCCC
Confidence 11121 233344578899999999999999999999866544443332 2223334455554
No 447
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=95.25 E-value=0.035 Score=48.28 Aligned_cols=42 Identities=19% Similarity=0.251 Sum_probs=34.4
Q ss_pred CCceEEEEc-ccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHH
Q 018506 44 QFESVGFIG-LGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFS 85 (355)
Q Consensus 44 ~~mkIgiIG-~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~ 85 (355)
..++|-|.| .|.+|..+++.|++.|++|++.+|++++.+.+.
T Consensus 10 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~ 52 (255)
T 1fmc_A 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVV 52 (255)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence 335676665 599999999999999999999999988766543
No 448
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=95.24 E-value=0.058 Score=47.15 Aligned_cols=43 Identities=19% Similarity=0.146 Sum_probs=35.7
Q ss_pred CCceEEEEc-ccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHh
Q 018506 44 QFESVGFIG-LGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSD 86 (355)
Q Consensus 44 ~~mkIgiIG-~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~ 86 (355)
+.++|-|.| .|.+|..+++.|++.|++|++.+|++++.+.+.+
T Consensus 4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~ 47 (254)
T 1hdc_A 4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAR 47 (254)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 335666775 5899999999999999999999999888776654
No 449
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=95.23 E-value=0.038 Score=51.12 Aligned_cols=41 Identities=17% Similarity=0.231 Sum_probs=33.9
Q ss_pred CceEEEEcccHHhHHHHHHHHHCCC-cEEEEeCChhHHHHHH
Q 018506 45 FESVGFIGLGNMGFRMASNLMKAGY-KMAVHDVNCNVMKMFS 85 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~~G~-~V~v~dr~~~~~~~l~ 85 (355)
..+|.|||+|.+|+.++..|+.+|. +++++|++.-....+.
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~ 159 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQIENTNLT 159 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGG
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCcCcccccc
Confidence 4689999999999999999999997 6999998754433443
No 450
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=95.16 E-value=0.014 Score=51.96 Aligned_cols=56 Identities=18% Similarity=0.262 Sum_probs=42.0
Q ss_pred ceEEEEc-ccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhh--cCCEEEEeC
Q 018506 46 ESVGFIG-LGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAE--ASDVVITML 109 (355)
Q Consensus 46 mkIgiIG-~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~--~aDiVi~~v 109 (355)
|||.|.| .|.+|+.++..|.+.||+|++.+|.+. .+.-..+..++++ .+|+||-+.
T Consensus 6 m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~--------D~~d~~~~~~~~~~~~~d~vi~~a 64 (287)
T 3sc6_A 6 ERVIITGANGQLGKQLQEELNPEEYDIYPFDKKLL--------DITNISQVQQVVQEIRPHIIIHCA 64 (287)
T ss_dssp EEEEEESTTSHHHHHHHHHSCTTTEEEEEECTTTS--------CTTCHHHHHHHHHHHCCSEEEECC
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCEEEEeccccc--------CCCCHHHHHHHHHhcCCCEEEECC
Confidence 5899998 599999999999999999999998321 1111223445555 589998775
No 451
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=95.15 E-value=0.0073 Score=56.19 Aligned_cols=35 Identities=17% Similarity=0.207 Sum_probs=31.6
Q ss_pred ceEEEEcc-cHHhHHHHHHHHHCCCcEEEEeCChhH
Q 018506 46 ESVGFIGL-GNMGFRMASNLMKAGYKMAVHDVNCNV 80 (355)
Q Consensus 46 mkIgiIG~-G~mG~~ia~~L~~~G~~V~v~dr~~~~ 80 (355)
++|.|.|+ |.+|+.++..|++.|++|++.+|+++.
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~ 64 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSN 64 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSS
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCcc
Confidence 57999986 999999999999999999999998654
No 452
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=95.15 E-value=0.021 Score=50.50 Aligned_cols=39 Identities=13% Similarity=0.207 Sum_probs=32.4
Q ss_pred ceEEEE--cccHHhHHHHHHHHHCCCcEEEEeCChhHHHHH
Q 018506 46 ESVGFI--GLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMF 84 (355)
Q Consensus 46 mkIgiI--G~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l 84 (355)
.|+.+| |.|.+|.++++.|++.|++|++.+|++++.+.+
T Consensus 16 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~ 56 (266)
T 3p19_A 16 KKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKAL 56 (266)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHh
Confidence 355555 568999999999999999999999998876654
No 453
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=95.15 E-value=0.013 Score=52.30 Aligned_cols=60 Identities=15% Similarity=0.212 Sum_probs=42.7
Q ss_pred ceEEEEcc-cHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhc--CCEEEEeCC
Q 018506 46 ESVGFIGL-GNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEA--SDVVITMLP 110 (355)
Q Consensus 46 mkIgiIG~-G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~--aDiVi~~v~ 110 (355)
|||.|.|+ |.+|+.+++.|. .||+|++.+|++.. ....+.-..+..++++. +|+||-+..
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~----~~~D~~d~~~~~~~~~~~~~d~vih~a~ 63 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSKE----FCGDFSNPKGVAETVRKLRPDVIVNAAA 63 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCSS----SCCCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred CeEEEECCCCHHHHHHHHHhh-cCCeEEEecccccc----ccccCCCHHHHHHHHHhcCCCEEEECcc
Confidence 68999986 999999999999 89999999997621 11111111234455555 999998753
No 454
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=95.14 E-value=0.065 Score=49.33 Aligned_cols=46 Identities=15% Similarity=0.130 Sum_probs=40.4
Q ss_pred CceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCC
Q 018506 45 FESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVP 90 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~ 90 (355)
-.+|.|+|+|.+|...++.+...|.+|++.++++++.+.+++.|+.
T Consensus 169 g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~ 214 (352)
T 1e3j_A 169 GTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGAD 214 (352)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCC
Confidence 3579999999999999999888999999999999998888877653
No 455
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=95.13 E-value=0.0049 Score=53.70 Aligned_cols=35 Identities=17% Similarity=0.192 Sum_probs=30.9
Q ss_pred ceEEEEcc-cHHhHHHHHHHHHCCCcEEEEeCChhH
Q 018506 46 ESVGFIGL-GNMGFRMASNLMKAGYKMAVHDVNCNV 80 (355)
Q Consensus 46 mkIgiIG~-G~mG~~ia~~L~~~G~~V~v~dr~~~~ 80 (355)
++|-|.|+ |.+|..+++.|++.|++|++.+|++++
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~ 37 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQAD 37 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhH
Confidence 46888865 999999999999999999999998764
No 456
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=95.13 E-value=0.02 Score=51.56 Aligned_cols=37 Identities=22% Similarity=0.167 Sum_probs=32.6
Q ss_pred CCCceEEEEcc-cHHhHHHHHHHHHCCCcEEEEeCChh
Q 018506 43 CQFESVGFIGL-GNMGFRMASNLMKAGYKMAVHDVNCN 79 (355)
Q Consensus 43 ~~~mkIgiIG~-G~mG~~ia~~L~~~G~~V~v~dr~~~ 79 (355)
.++|+|.|.|+ |.+|+.++..|.+.||+|++.+|++.
T Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 5 TLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred cCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 34689999987 99999999999999999999999765
No 457
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=95.11 E-value=0.099 Score=48.20 Aligned_cols=46 Identities=17% Similarity=0.226 Sum_probs=40.3
Q ss_pred CceEEEEcccHHhHHHHHHHHHCCC-cEEEEeCChhHHHHHHhCCCC
Q 018506 45 FESVGFIGLGNMGFRMASNLMKAGY-KMAVHDVNCNVMKMFSDMGVP 90 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~~G~-~V~v~dr~~~~~~~l~~~g~~ 90 (355)
-.+|.|+|+|.+|...++.+...|. +|++.++++++.+.+++.|+.
T Consensus 172 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~ 218 (356)
T 1pl8_A 172 GHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGAD 218 (356)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCC
Confidence 3579999999999999998888998 899999999998888877754
No 458
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=95.11 E-value=0.017 Score=54.88 Aligned_cols=33 Identities=18% Similarity=0.349 Sum_probs=31.0
Q ss_pred ceEEEEcccHHhHHHHHHHHHCCCcEEEEeCCh
Q 018506 46 ESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNC 78 (355)
Q Consensus 46 mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~ 78 (355)
++|.|||.|..|..+|..|+++|++|+++++.+
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 579999999999999999999999999999765
No 459
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=95.06 E-value=0.02 Score=53.25 Aligned_cols=37 Identities=19% Similarity=0.324 Sum_probs=32.3
Q ss_pred CCCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChh
Q 018506 43 CQFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCN 79 (355)
Q Consensus 43 ~~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~ 79 (355)
+..++|.|||.|..|..+|..|++.|++|+++++++.
T Consensus 9 m~~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~ 45 (379)
T 3alj_A 9 GKTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSE 45 (379)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCC
Confidence 3457899999999999999999999999999998653
No 460
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=95.05 E-value=0.067 Score=49.65 Aligned_cols=46 Identities=20% Similarity=0.303 Sum_probs=39.7
Q ss_pred CceEEEEcccHHhHHHHHHHHHCCC-cEEEEeCChhHHHHHHhCCCC
Q 018506 45 FESVGFIGLGNMGFRMASNLMKAGY-KMAVHDVNCNVMKMFSDMGVP 90 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~~G~-~V~v~dr~~~~~~~l~~~g~~ 90 (355)
-.+|.|+|+|.+|...++.+...|. +|++.++++++.+.+++.|+.
T Consensus 191 g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~ 237 (373)
T 2fzw_A 191 GSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGAT 237 (373)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCc
Confidence 3579999999999999998888898 799999999998887776653
No 461
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=95.05 E-value=0.074 Score=48.67 Aligned_cols=46 Identities=17% Similarity=0.286 Sum_probs=40.8
Q ss_pred CceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCC
Q 018506 45 FESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVP 90 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~ 90 (355)
-.+|.|+|+|.+|...++.+...|.+|++.++++++.+.+++.|+.
T Consensus 167 g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~ 212 (340)
T 3s2e_A 167 GQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAE 212 (340)
T ss_dssp TSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCC
Confidence 4679999999999999999999999999999999999888877643
No 462
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=95.03 E-value=0.021 Score=53.45 Aligned_cols=35 Identities=17% Similarity=0.269 Sum_probs=32.1
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCCh
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNC 78 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~ 78 (355)
+.|+|.|||+|..|...|..|.++|++|+++++++
T Consensus 2 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~ 36 (384)
T 2bi7_A 2 KSKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRD 36 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecC
Confidence 34799999999999999999999999999999864
No 463
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=95.02 E-value=0.062 Score=46.99 Aligned_cols=41 Identities=20% Similarity=0.195 Sum_probs=34.7
Q ss_pred ceEEEEc-ccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHh
Q 018506 46 ESVGFIG-LGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSD 86 (355)
Q Consensus 46 mkIgiIG-~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~ 86 (355)
+++-|.| .|.+|.++++.|++.|++|++.+|++++.+++.+
T Consensus 10 k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~ 51 (261)
T 3n74_A 10 KVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAG 51 (261)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence 4566665 5789999999999999999999999988877654
No 464
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=95.01 E-value=0.012 Score=52.92 Aligned_cols=35 Identities=20% Similarity=0.285 Sum_probs=31.8
Q ss_pred ceEEEEcc-cHHhHHHHHHHHHC--CCcEEEEeCChhH
Q 018506 46 ESVGFIGL-GNMGFRMASNLMKA--GYKMAVHDVNCNV 80 (355)
Q Consensus 46 mkIgiIG~-G~mG~~ia~~L~~~--G~~V~v~dr~~~~ 80 (355)
|+|.|.|+ |.+|+.+++.|.+. ||+|++.+|++..
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~ 40 (312)
T 2yy7_A 3 PKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLN 40 (312)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCS
T ss_pred ceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcc
Confidence 78999987 99999999999998 8999999997655
No 465
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=95.01 E-value=0.085 Score=47.27 Aligned_cols=76 Identities=12% Similarity=0.212 Sum_probs=58.4
Q ss_pred CCceEEEEccc-HHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEeCCCchHHHHHhcCC
Q 018506 44 QFESVGFIGLG-NMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNGP 122 (355)
Q Consensus 44 ~~mkIgiIG~G-~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~v~~~~~~~~vl~~~ 122 (355)
.-+++.|||-+ .+|.+++..|.+.+..|++++.. +.++.+.+++|||||.++..+..+.
T Consensus 178 ~Gk~vvViGRS~iVGkPla~LL~~~~ATVTi~Hs~--------------T~dl~~~~~~ADIvV~A~G~p~~i~------ 237 (303)
T 4b4u_A 178 AGKHAVVVGRSAILGKPMAMMLLQANATVTICHSR--------------TQNLPELVKQADIIVGAVGKAELIQ------ 237 (303)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT--------------CSSHHHHHHTCSEEEECSCSTTCBC------
T ss_pred CCCEEEEEeccccccchHHHHHHhcCCEEEEecCC--------------CCCHHHHhhcCCeEEeccCCCCccc------
Confidence 45789999955 57999999999999999998753 2467788899999999997763322
Q ss_pred CccccCCCCCCCeEEEEcCCCC
Q 018506 123 NGLLQGGNSVRPQLLIDSSTID 144 (355)
Q Consensus 123 ~~~l~~~~~~~~~ivi~~st~~ 144 (355)
..+++ +|.+|||.+...
T Consensus 238 ~d~vk-----~GavVIDVGin~ 254 (303)
T 4b4u_A 238 KDWIK-----QGAVVVDAGFHP 254 (303)
T ss_dssp GGGSC-----TTCEEEECCCBC
T ss_pred ccccc-----CCCEEEEeceec
Confidence 12443 568999998753
No 466
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=95.00 E-value=0.021 Score=51.74 Aligned_cols=33 Identities=27% Similarity=0.415 Sum_probs=31.1
Q ss_pred ceEEEEcccHHhHHHHHHHHHCCCcEEEEeCCh
Q 018506 46 ESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNC 78 (355)
Q Consensus 46 mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~ 78 (355)
++|.|||.|..|..+|..|+++|++|+++++++
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~ 35 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcEEEEECCC
Confidence 579999999999999999999999999999874
No 467
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=94.99 E-value=0.026 Score=46.41 Aligned_cols=34 Identities=32% Similarity=0.306 Sum_probs=31.6
Q ss_pred CceEEEEcccHHhHHHHHHHHHCCCcEEEEeCCh
Q 018506 45 FESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNC 78 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~ 78 (355)
|.+|.|||.|..|..+|..|.+.|.+|+++++++
T Consensus 1 ~~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~ 34 (180)
T 2ywl_A 1 MWDVIVVGGGPSGLSAALFLARAGLKVLVLDGGR 34 (180)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 3589999999999999999999999999999875
No 468
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=94.98 E-value=0.046 Score=47.84 Aligned_cols=39 Identities=23% Similarity=0.267 Sum_probs=32.4
Q ss_pred eEEEE-cccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHH
Q 018506 47 SVGFI-GLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFS 85 (355)
Q Consensus 47 kIgiI-G~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~ 85 (355)
+|-|. |.|.+|..+++.|++.|++|++.+|++++.+.+.
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~ 43 (256)
T 1geg_A 4 VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVA 43 (256)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 34455 5789999999999999999999999988766543
No 469
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=94.98 E-value=0.024 Score=55.37 Aligned_cols=42 Identities=19% Similarity=0.256 Sum_probs=36.1
Q ss_pred CceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHh
Q 018506 45 FESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSD 86 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~ 86 (355)
..++-|+|+|.+|.+++..|++.|.+|++++|+.++++.+.+
T Consensus 364 ~k~vlV~GaGGig~aia~~L~~~G~~V~i~~R~~~~a~~la~ 405 (523)
T 2o7s_A 364 SKTVVVIGAGGAGKALAYGAKEKGAKVVIANRTYERALELAE 405 (523)
T ss_dssp --CEEEECCSHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHH
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence 357899999999999999999999999999999999887765
No 470
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=94.97 E-value=0.046 Score=50.19 Aligned_cols=46 Identities=11% Similarity=0.043 Sum_probs=39.8
Q ss_pred CceEEEEcccHHhHHHHHHHHHC--CCcEEEEeCChhHHHHHHhCCCC
Q 018506 45 FESVGFIGLGNMGFRMASNLMKA--GYKMAVHDVNCNVMKMFSDMGVP 90 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~~--G~~V~v~dr~~~~~~~l~~~g~~ 90 (355)
-.+|.|+|+|.+|...++.+... |.+|++.++++++.+.+++.|+.
T Consensus 171 g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~ 218 (344)
T 2h6e_A 171 EPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGAD 218 (344)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCC
Confidence 46799999999999999988888 99999999999998877776653
No 471
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=94.95 E-value=0.082 Score=48.53 Aligned_cols=45 Identities=20% Similarity=0.231 Sum_probs=39.4
Q ss_pred CceEEEEcc-cHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCC
Q 018506 45 FESVGFIGL-GNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGV 89 (355)
Q Consensus 45 ~mkIgiIG~-G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~ 89 (355)
..+|.|+|+ |.+|..+++.+...|.+|++.+|++++.+.+.+.|.
T Consensus 170 g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~ 215 (347)
T 2hcy_A 170 GHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGG 215 (347)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTC
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCC
Confidence 367999999 999999999999999999999999998877776654
No 472
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=94.95 E-value=0.0059 Score=54.04 Aligned_cols=37 Identities=16% Similarity=0.179 Sum_probs=31.8
Q ss_pred CCceEEEEc-ccHHhHHHHHHHHHCCCcEEEEeCChhH
Q 018506 44 QFESVGFIG-LGNMGFRMASNLMKAGYKMAVHDVNCNV 80 (355)
Q Consensus 44 ~~mkIgiIG-~G~mG~~ia~~L~~~G~~V~v~dr~~~~ 80 (355)
++++|-|.| .|.+|+.++..|++.|++|++.+|++.+
T Consensus 2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~ 39 (267)
T 3rft_A 2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLD 39 (267)
T ss_dssp CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcc
Confidence 345677777 7999999999999999999999998754
No 473
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=94.94 E-value=0.027 Score=52.26 Aligned_cols=45 Identities=20% Similarity=0.285 Sum_probs=39.1
Q ss_pred CceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHH-hCCC
Q 018506 45 FESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFS-DMGV 89 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~-~~g~ 89 (355)
-.+|.|+|+|.+|...++.+...|.+|++.++++++.+.+. +.|+
T Consensus 188 g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa 233 (366)
T 1yqd_A 188 GKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGA 233 (366)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCC
Confidence 36799999999999999999999999999999999887766 4553
No 474
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=94.92 E-value=0.068 Score=49.29 Aligned_cols=35 Identities=29% Similarity=0.430 Sum_probs=30.8
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCC-cEEEEeCCh
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGY-KMAVHDVNC 78 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~-~V~v~dr~~ 78 (355)
...+|.|||+|.+|+.++.+|+..|. .++++|.+.
T Consensus 35 ~~~~VlivG~GGlG~~ia~~La~~Gvg~itlvD~d~ 70 (346)
T 1y8q_A 35 RASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQ 70 (346)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEECCC
Confidence 34789999999999999999999997 699997653
No 475
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=94.91 E-value=0.048 Score=47.78 Aligned_cols=39 Identities=21% Similarity=0.365 Sum_probs=33.1
Q ss_pred eEEEE--cccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHH
Q 018506 47 SVGFI--GLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFS 85 (355)
Q Consensus 47 kIgiI--G~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~ 85 (355)
|+.+| |.|.+|.++++.|++.|++|++.+|++++.+.+.
T Consensus 13 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~ 53 (256)
T 3gaf_A 13 AVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVA 53 (256)
T ss_dssp CEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 45555 6789999999999999999999999988876654
No 476
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=94.91 E-value=0.017 Score=52.88 Aligned_cols=34 Identities=26% Similarity=0.241 Sum_probs=31.3
Q ss_pred CceEEEEcccHHhHHHHHHHHH---CCCcEEEEeCCh
Q 018506 45 FESVGFIGLGNMGFRMASNLMK---AGYKMAVHDVNC 78 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~---~G~~V~v~dr~~ 78 (355)
|++|.|||.|..|...|..|++ .|++|+++++++
T Consensus 1 m~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~ 37 (342)
T 3qj4_A 1 MAQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKAD 37 (342)
T ss_dssp CEEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSS
T ss_pred CCcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCC
Confidence 4689999999999999999999 999999999764
No 477
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=94.89 E-value=0.045 Score=48.42 Aligned_cols=39 Identities=15% Similarity=0.230 Sum_probs=32.5
Q ss_pred eEEEE-cccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHH
Q 018506 47 SVGFI-GLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFS 85 (355)
Q Consensus 47 kIgiI-G~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~ 85 (355)
++-|. |.|.+|.++++.|++.|++|++.+|++++.+.+.
T Consensus 13 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~ 52 (271)
T 3tzq_B 13 VAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAA 52 (271)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence 34444 5689999999999999999999999988776654
No 478
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=94.89 E-value=0.028 Score=52.33 Aligned_cols=75 Identities=12% Similarity=0.168 Sum_probs=52.3
Q ss_pred CceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCC---CCHH---HHhhcCCEEEEeCCCchHHHHH
Q 018506 45 FESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTK---ETPF---EVAEASDVVITMLPSSSHVLDV 118 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~---~s~~---e~~~~aDiVi~~v~~~~~~~~v 118 (355)
-.+|.|+|+|.+|...++.+...|.+|++.++++++.+.+++.|+... .+.+ ++....|+||-++..+..++..
T Consensus 195 g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~g~Dvvid~~g~~~~~~~~ 274 (369)
T 1uuf_A 195 GKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAAPHNLDDF 274 (369)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHTTTTCEEEEEECCSSCCCHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEeccccHHHHHHhhcCCCEEEECCCCHHHHHHH
Confidence 367999999999999999998899999999999999888777665321 1111 1113457777776544334443
Q ss_pred h
Q 018506 119 Y 119 (355)
Q Consensus 119 l 119 (355)
+
T Consensus 275 ~ 275 (369)
T 1uuf_A 275 T 275 (369)
T ss_dssp H
T ss_pred H
Confidence 3
No 479
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=94.88 E-value=0.053 Score=47.01 Aligned_cols=41 Identities=15% Similarity=0.199 Sum_probs=33.8
Q ss_pred ceEEEE-cccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHh
Q 018506 46 ESVGFI-GLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSD 86 (355)
Q Consensus 46 mkIgiI-G~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~ 86 (355)
+++-|. |.|.+|..+++.|++.|++|++.+|++++.+.+.+
T Consensus 6 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~ 47 (247)
T 3lyl_A 6 KVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFEN 47 (247)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 445555 56899999999999999999999999888766543
No 480
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=94.84 E-value=0.004 Score=54.97 Aligned_cols=35 Identities=14% Similarity=0.204 Sum_probs=31.5
Q ss_pred CceEEEEcc-cHHhHHHHHHHHHCCCcEEEEeCChh
Q 018506 45 FESVGFIGL-GNMGFRMASNLMKAGYKMAVHDVNCN 79 (355)
Q Consensus 45 ~mkIgiIG~-G~mG~~ia~~L~~~G~~V~v~dr~~~ 79 (355)
|++|.|.|+ |.+|+.+++.|.+.|++|++.+|+++
T Consensus 2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 37 (267)
T 3ay3_A 2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDL 37 (267)
T ss_dssp EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCC
T ss_pred CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCc
Confidence 357999986 99999999999999999999999865
No 481
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=94.84 E-value=0.065 Score=47.06 Aligned_cols=40 Identities=18% Similarity=0.169 Sum_probs=33.9
Q ss_pred ceEEEE-cccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHH
Q 018506 46 ESVGFI-GLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFS 85 (355)
Q Consensus 46 mkIgiI-G~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~ 85 (355)
++|-|. |.|.+|.++++.|++.|++|++.+|++++.+.+.
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~ 48 (260)
T 1nff_A 8 KVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMA 48 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 456666 5789999999999999999999999988876654
No 482
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=94.83 E-value=0.086 Score=46.73 Aligned_cols=40 Identities=18% Similarity=0.185 Sum_probs=32.9
Q ss_pred ceEEEE-cccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHH
Q 018506 46 ESVGFI-GLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFS 85 (355)
Q Consensus 46 mkIgiI-G~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~ 85 (355)
++|-|. |.|.+|..+++.|++.|++|++.+|++++.+.+.
T Consensus 23 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~ 63 (277)
T 2rhc_B 23 EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTL 63 (277)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 345555 6789999999999999999999999988766543
No 483
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=94.82 E-value=0.048 Score=48.15 Aligned_cols=42 Identities=14% Similarity=0.252 Sum_probs=33.4
Q ss_pred CCceEEEE--cccHHhHHHHHHHHHCCCcEEEE-eCChhHHHHHH
Q 018506 44 QFESVGFI--GLGNMGFRMASNLMKAGYKMAVH-DVNCNVMKMFS 85 (355)
Q Consensus 44 ~~mkIgiI--G~G~mG~~ia~~L~~~G~~V~v~-dr~~~~~~~l~ 85 (355)
..+|+.+| |.|.+|.++++.|++.|++|++. +|+++..+.+.
T Consensus 24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~ 68 (272)
T 4e3z_A 24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVV 68 (272)
T ss_dssp CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHH
Confidence 34566666 67999999999999999999775 78887766554
No 484
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=94.81 E-value=0.07 Score=46.73 Aligned_cols=41 Identities=15% Similarity=0.243 Sum_probs=34.4
Q ss_pred ceEEEE-cccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHh
Q 018506 46 ESVGFI-GLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSD 86 (355)
Q Consensus 46 mkIgiI-G~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~ 86 (355)
+++-|. |.|.+|.++++.|++.|++|++.+|++++.+.+.+
T Consensus 9 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~ 50 (259)
T 4e6p_A 9 KSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAA 50 (259)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 455566 56899999999999999999999999988776543
No 485
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=94.80 E-value=0.11 Score=45.65 Aligned_cols=40 Identities=15% Similarity=0.206 Sum_probs=33.1
Q ss_pred ceEEEE-cccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHH
Q 018506 46 ESVGFI-GLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFS 85 (355)
Q Consensus 46 mkIgiI-G~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~ 85 (355)
+++-|. |.|.+|.++++.|++.|++|++.+|++++.+.+.
T Consensus 9 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~ 49 (265)
T 3lf2_A 9 AVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAE 49 (265)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 334444 5789999999999999999999999998876654
No 486
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=94.80 E-value=0.13 Score=44.67 Aligned_cols=79 Identities=9% Similarity=0.178 Sum_probs=50.6
Q ss_pred EEEE-cccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHhCCCCCCCCHHHHhhcCCEEEEe--CCCchHHHHHhcCCCc
Q 018506 48 VGFI-GLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSDMGVPTKETPFEVAEASDVVITM--LPSSSHVLDVYNGPNG 124 (355)
Q Consensus 48 IgiI-G~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~aDiVi~~--v~~~~~~~~vl~~~~~ 124 (355)
+-|. |.|.+|.++++.|++.|++|++.+|++++.+.+.+. . ..++.++. +.++++++.++.....
T Consensus 3 vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~----------~--~~~~~~~~~Dv~~~~~v~~~~~~~~~ 70 (248)
T 3asu_A 3 VLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDE----------L--GDNLYIAQLDVRNRAAIEEMLASLPA 70 (248)
T ss_dssp EEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----------H--CTTEEEEECCTTCHHHHHHHHHTSCT
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----------h--cCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 4444 568999999999999999999999998877665431 0 01233322 4556677777765432
Q ss_pred cccCCCCCCCeEEEEcCCC
Q 018506 125 LLQGGNSVRPQLLIDSSTI 143 (355)
Q Consensus 125 ~l~~~~~~~~~ivi~~st~ 143 (355)
.... =.++|+....
T Consensus 71 ~~g~-----iD~lvnnAg~ 84 (248)
T 3asu_A 71 EWCN-----IDILVNNAGL 84 (248)
T ss_dssp TTCC-----CCEEEECCCC
T ss_pred hCCC-----CCEEEECCCc
Confidence 2211 1367776553
No 487
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=94.80 E-value=0.076 Score=45.54 Aligned_cols=41 Identities=15% Similarity=0.200 Sum_probs=34.4
Q ss_pred ceEEEE-cccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHh
Q 018506 46 ESVGFI-GLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSD 86 (355)
Q Consensus 46 mkIgiI-G~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~ 86 (355)
++|-|. |.|.+|..+++.|++.|++|++.+|++++.+.+.+
T Consensus 6 k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~ 47 (234)
T 2ehd_A 6 GAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAA 47 (234)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence 346666 67899999999999999999999999888766543
No 488
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=94.79 E-value=0.044 Score=48.17 Aligned_cols=42 Identities=14% Similarity=0.127 Sum_probs=35.4
Q ss_pred CCceEEEEcc-c-HHhHHHHHHHHHCCCcEEEEeCChhHHHHHH
Q 018506 44 QFESVGFIGL-G-NMGFRMASNLMKAGYKMAVHDVNCNVMKMFS 85 (355)
Q Consensus 44 ~~mkIgiIG~-G-~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~ 85 (355)
+.+++-|.|. | .+|..+++.|++.|++|++.+|+.++.+.+.
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~ 64 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETR 64 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHH
Confidence 3456777798 8 5999999999999999999999988876654
No 489
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=94.78 E-value=0.039 Score=48.02 Aligned_cols=41 Identities=17% Similarity=0.160 Sum_probs=33.1
Q ss_pred CCceEEEE-cccHHhHHHHHHHHHCCCcEEEEeCC-hhHHHHH
Q 018506 44 QFESVGFI-GLGNMGFRMASNLMKAGYKMAVHDVN-CNVMKMF 84 (355)
Q Consensus 44 ~~mkIgiI-G~G~mG~~ia~~L~~~G~~V~v~dr~-~~~~~~l 84 (355)
..++|-|. |.|.+|..+++.|++.|++|++.+|+ +++.+.+
T Consensus 6 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~ 48 (258)
T 3afn_B 6 KGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDET 48 (258)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHH
Confidence 33556666 56999999999999999999999998 7665544
No 490
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=94.77 E-value=0.11 Score=46.12 Aligned_cols=40 Identities=18% Similarity=0.431 Sum_probs=31.2
Q ss_pred ceEEEE--cccHHhHHHHHHHHHCCCcEEEEeC-ChhHHHHHH
Q 018506 46 ESVGFI--GLGNMGFRMASNLMKAGYKMAVHDV-NCNVMKMFS 85 (355)
Q Consensus 46 mkIgiI--G~G~mG~~ia~~L~~~G~~V~v~dr-~~~~~~~l~ 85 (355)
.|+.+| |.|.+|.++++.|++.|++|++.+| +++..+.+.
T Consensus 29 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~ 71 (280)
T 4da9_A 29 RPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVI 71 (280)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHH
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH
Confidence 345555 5689999999999999999999985 666655543
No 491
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=94.77 E-value=0.03 Score=52.44 Aligned_cols=36 Identities=19% Similarity=0.226 Sum_probs=32.6
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCChh
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNCN 79 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~~ 79 (355)
..++|.|||.|..|..+|..|++.|++|+++++.+.
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 39 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQ 39 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 346899999999999999999999999999998654
No 492
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=94.75 E-value=0.02 Score=50.92 Aligned_cols=35 Identities=23% Similarity=0.369 Sum_probs=31.9
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCCh
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNC 78 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~ 78 (355)
+.++|.|||.|.+|..-+..|.+.|++|++++.+.
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 45889999999999999999999999999998654
No 493
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=94.74 E-value=0.026 Score=52.28 Aligned_cols=34 Identities=24% Similarity=0.220 Sum_probs=31.3
Q ss_pred CceEEEEcccHHhHHHHHHHHHCCCcEEEEeCCh
Q 018506 45 FESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNC 78 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~ 78 (355)
+.+|.|||.|..|...|..|+++|++|+++++..
T Consensus 17 ~~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~ 50 (382)
T 1ryi_A 17 HYEAVVIGGGIIGSAIAYYLAKENKNTALFESGT 50 (382)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 4689999999999999999999999999999853
No 494
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=94.74 E-value=0.055 Score=49.30 Aligned_cols=33 Identities=33% Similarity=0.372 Sum_probs=29.8
Q ss_pred CceEEEEc-ccHHhHHHHHHHHHCCCcEEEEeCC
Q 018506 45 FESVGFIG-LGNMGFRMASNLMKAGYKMAVHDVN 77 (355)
Q Consensus 45 ~mkIgiIG-~G~mG~~ia~~L~~~G~~V~v~dr~ 77 (355)
.|+|.|.| .|.+|+.++..|++.||+|++.+|+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~ 35 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNF 35 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecC
Confidence 36899997 6999999999999999999999875
No 495
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=94.73 E-value=0.025 Score=54.63 Aligned_cols=34 Identities=24% Similarity=0.317 Sum_probs=31.3
Q ss_pred CceEEEEcccHHhHHHHHHHHHCCCcEEEEeCCh
Q 018506 45 FESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNC 78 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~ 78 (355)
|++|.|||+|.-|..-|..|+++|++|+|+.++.
T Consensus 1 Mk~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~ 34 (501)
T 4dgk_A 1 MKPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRD 34 (501)
T ss_dssp CCCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCcEEEEccCC
Confidence 5789999999999999999999999999998864
No 496
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=94.73 E-value=0.026 Score=51.28 Aligned_cols=35 Identities=11% Similarity=0.162 Sum_probs=30.3
Q ss_pred CCceEEEEc-ccHHhHHHHHHHHHCC--CcEEEEeCCh
Q 018506 44 QFESVGFIG-LGNMGFRMASNLMKAG--YKMAVHDVNC 78 (355)
Q Consensus 44 ~~mkIgiIG-~G~mG~~ia~~L~~~G--~~V~v~dr~~ 78 (355)
+.|||.|.| .|.+|+.++..|++.| ++|++.+|++
T Consensus 2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~ 39 (336)
T 2hun_A 2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLG 39 (336)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCC
T ss_pred CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCc
Confidence 347899998 5999999999999986 8999999864
No 497
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=94.73 E-value=0.035 Score=49.21 Aligned_cols=39 Identities=15% Similarity=0.239 Sum_probs=33.2
Q ss_pred eEEEE--cccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHH
Q 018506 47 SVGFI--GLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFS 85 (355)
Q Consensus 47 kIgiI--G~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~ 85 (355)
|+.+| |.|.+|.++++.|++.|++|++.+|++++.+++.
T Consensus 27 k~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~ 67 (271)
T 4ibo_A 27 RTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTV 67 (271)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 55555 6789999999999999999999999998876654
No 498
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=94.71 E-value=0.021 Score=51.64 Aligned_cols=35 Identities=23% Similarity=0.170 Sum_probs=32.0
Q ss_pred CCceEEEEcccHHhHHHHHHHHHCCCcEEEEeCCh
Q 018506 44 QFESVGFIGLGNMGFRMASNLMKAGYKMAVHDVNC 78 (355)
Q Consensus 44 ~~mkIgiIG~G~mG~~ia~~L~~~G~~V~v~dr~~ 78 (355)
++++|.|||.|.-|...|..|++.|++|+++++.+
T Consensus 21 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~ 55 (338)
T 3itj_A 21 VHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMM 55 (338)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 44689999999999999999999999999999854
No 499
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=94.71 E-value=0.09 Score=48.82 Aligned_cols=45 Identities=16% Similarity=0.234 Sum_probs=38.9
Q ss_pred CceEEEEcccHHhHHHHHHHHHCCC-cEEEEeCChhHHHHHHhCCC
Q 018506 45 FESVGFIGLGNMGFRMASNLMKAGY-KMAVHDVNCNVMKMFSDMGV 89 (355)
Q Consensus 45 ~mkIgiIG~G~mG~~ia~~L~~~G~-~V~v~dr~~~~~~~l~~~g~ 89 (355)
-.+|.|+|+|.+|...++.+...|. .|++.++++++.+.+++.|+
T Consensus 183 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa 228 (370)
T 4ej6_A 183 GSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGA 228 (370)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCC
Confidence 3579999999999999999999998 79999999999887776554
No 500
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=94.71 E-value=0.066 Score=47.58 Aligned_cols=40 Identities=15% Similarity=0.318 Sum_probs=33.8
Q ss_pred eEEEE--cccHHhHHHHHHHHHCCCcEEEEeCChhHHHHHHh
Q 018506 47 SVGFI--GLGNMGFRMASNLMKAGYKMAVHDVNCNVMKMFSD 86 (355)
Q Consensus 47 kIgiI--G~G~mG~~ia~~L~~~G~~V~v~dr~~~~~~~l~~ 86 (355)
|+.+| |.|.+|.++++.|++.|++|++.+|++++.+.+.+
T Consensus 30 k~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~ 71 (277)
T 3gvc_A 30 KVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAAT 71 (277)
T ss_dssp CEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 55555 67899999999999999999999999888776543
Done!