Query 018507
Match_columns 355
No_of_seqs 244 out of 2404
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 16:20:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018507.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018507hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3jxp_A Coenzyme PQQ synthesis 100.0 1.5E-43 5.2E-48 335.8 4.8 257 42-353 4-305 (321)
2 3g1p_A Protein PHNP; C-P lyase 100.0 2E-40 6.8E-45 305.0 8.6 239 42-353 4-251 (258)
3 3md7_A Beta-lactamase-like; ss 100.0 5.9E-40 2E-44 307.5 8.9 242 41-353 29-291 (293)
4 3zwf_A Zinc phosphodiesterase 100.0 2E-37 7E-42 299.1 21.7 257 90-353 17-357 (368)
5 2cbn_A Ribonuclease Z; phospho 100.0 2.6E-35 8.9E-40 276.7 25.7 252 91-352 19-305 (306)
6 2e7y_A TRNAse Z; tRNA maturati 100.0 1.1E-35 3.8E-40 275.3 21.2 259 83-352 3-279 (280)
7 1y44_A Ribonuclease Z; zinc-de 100.0 1.5E-34 5.1E-39 273.5 24.0 254 91-354 18-305 (320)
8 1zkp_A Hypothetical protein BA 100.0 2E-29 6.7E-34 232.5 20.6 212 91-352 42-267 (268)
9 3kl7_A Putative metal-dependen 99.9 2.9E-20 1E-24 168.3 21.6 169 93-331 38-222 (235)
10 2az4_A Hypothetical protein EF 99.8 1.4E-20 4.8E-25 184.8 15.9 175 115-331 84-272 (429)
11 3bk2_A RNAse J, metal dependen 99.8 5.5E-20 1.9E-24 186.5 20.3 202 89-332 29-262 (562)
12 3rpc_A Possible metal-dependen 99.8 1.1E-19 3.6E-24 167.3 18.0 181 115-352 64-263 (264)
13 3iek_A Ribonuclease TTHA0252; 99.8 1.6E-19 5.5E-24 177.5 20.0 202 93-338 15-242 (431)
14 2wyl_A L-ascorbate-6-phosphate 99.8 9.1E-19 3.1E-23 168.2 23.5 187 115-354 109-324 (360)
15 3bv6_A Metal-dependent hydrola 99.8 7E-19 2.4E-23 170.1 21.9 189 115-354 133-349 (379)
16 3zq4_A Ribonuclease J 1, RNAse 99.8 6.1E-19 2.1E-23 178.3 17.6 192 91-333 23-247 (555)
17 3af5_A Putative uncharacterize 99.8 4E-18 1.4E-22 175.6 22.1 229 80-350 188-462 (651)
18 3zdk_A 5' exonuclease apollo; 99.8 1.1E-18 3.8E-23 165.8 13.3 182 95-335 5-199 (336)
19 2i7x_A Protein CFT2; polyadeny 99.8 2.5E-18 8.7E-23 178.2 16.1 205 90-334 13-264 (717)
20 2i7t_A Cleavage and polyadenyl 99.8 4.5E-17 1.5E-21 161.3 23.9 168 81-284 12-211 (459)
21 2ycb_A Beta-CAsp RNAse, cleava 99.8 1.2E-17 4.2E-22 171.5 20.2 227 81-351 180-449 (636)
22 4b87_A DNA cross-LINK repair 1 99.8 7.5E-18 2.6E-22 162.0 16.9 180 98-335 35-222 (367)
23 1vjn_A Zn-dependent hydrolase 99.8 8.9E-18 3.1E-22 150.4 14.9 148 91-323 19-179 (220)
24 2xr1_A Cleavage and polyadenyl 99.8 5.4E-17 1.8E-21 166.8 22.5 228 80-350 183-451 (640)
25 2p4z_A Metal-dependent hydrola 99.7 4E-18 1.4E-22 158.5 11.3 210 90-352 31-283 (284)
26 3adr_A Putative uncharacterize 99.6 2.2E-14 7.4E-19 130.7 15.7 194 91-349 19-237 (261)
27 3l6n_A Metallo-beta-lactamase; 99.5 9E-13 3.1E-17 116.8 15.7 103 92-212 31-149 (219)
28 2xf4_A Hydroxyacylglutathione 99.4 6.6E-13 2.3E-17 117.0 11.8 115 91-212 12-142 (210)
29 2bib_A CBPE, teichoic acid pho 99.4 4.9E-13 1.7E-17 135.0 10.4 200 79-334 4-273 (547)
30 4ax1_B Metallo-beta-lactamase 99.4 1.6E-12 5.4E-17 120.7 12.4 118 90-214 56-194 (303)
31 1e5d_A Rubredoxin\:oxygen oxid 99.4 1.5E-12 5.2E-17 126.0 12.6 107 91-211 34-155 (402)
32 2r2d_A AGR_PTI_140P, Zn-depend 99.4 1.6E-12 5.3E-17 119.4 11.8 113 92-214 43-203 (276)
33 1ycg_A Nitric oxide reductase; 99.4 3E-12 1E-16 123.8 12.9 107 91-211 35-156 (398)
34 3hnn_A Putative diflavin flavo 99.4 1.2E-12 4E-17 119.8 8.4 107 92-211 43-164 (262)
35 1a7t_A Metallo-beta-lactamase; 99.3 1.5E-11 5.2E-16 110.1 15.3 103 92-212 37-155 (232)
36 2zwr_A Metallo-beta-lactamase 99.3 6.6E-12 2.2E-16 110.5 12.5 111 91-212 12-135 (207)
37 1k07_A FEZ-1 beta-lactamase; m 99.3 2.4E-12 8.2E-17 117.6 9.9 116 91-213 24-160 (263)
38 3m8t_A 'BLR6230 protein; subcl 99.3 3E-12 1E-16 118.5 10.3 116 92-214 55-189 (294)
39 2zo4_A Metallo-beta-lactamase 99.3 6.6E-12 2.3E-16 117.6 12.7 173 90-323 20-239 (317)
40 4efz_A Metallo-beta-lactamase 99.3 1.2E-11 4E-16 115.4 13.7 126 81-214 5-159 (298)
41 1m2x_A Class B carbapenemase B 99.3 3E-11 1E-15 107.5 15.3 103 92-212 27-145 (223)
42 4ad9_A Lactb2, beta-lactamase- 99.3 3.7E-11 1.3E-15 111.2 14.6 111 90-212 30-156 (289)
43 3q6v_A Beta-lactamase; metallo 99.3 4.8E-11 1.6E-15 106.5 14.7 174 92-333 26-227 (233)
44 1xm8_A Glyoxalase II; structur 99.3 7.9E-12 2.7E-16 114.0 9.3 102 89-212 9-122 (254)
45 2qed_A Hydroxyacylglutathione 99.3 1.6E-11 5.3E-16 112.3 11.1 108 80-210 7-125 (258)
46 1qh5_A Glyoxalase II, protein 99.3 1.4E-11 4.8E-16 112.7 10.8 105 83-211 3-119 (260)
47 2ohh_A Type A flavoprotein FPR 99.3 1.4E-11 4.7E-16 119.3 11.0 108 92-212 35-161 (404)
48 3tp9_A Beta-lactamase and rhod 99.3 1.4E-11 4.7E-16 122.3 10.3 118 81-214 4-135 (474)
49 1mqo_A Beta-lactamase II; alph 99.3 7.1E-12 2.4E-16 111.9 7.4 103 92-212 41-159 (227)
50 2p18_A Glyoxalase II; metallop 99.3 5.6E-11 1.9E-15 111.6 13.8 116 80-213 28-166 (311)
51 1sml_A Protein (penicillinase) 99.2 1.5E-11 5.1E-16 112.6 9.3 115 92-213 38-171 (269)
52 2vw8_A PA1000, PQSE; quinolone 99.2 5.1E-11 1.7E-15 111.0 12.6 116 92-212 24-171 (303)
53 3dha_A N-acyl homoserine lacto 99.2 2.2E-11 7.5E-16 110.4 9.9 85 116-214 101-185 (254)
54 2gcu_A Putative hydroxyacylglu 99.2 1.7E-11 5.7E-16 111.3 8.0 101 89-213 12-128 (245)
55 2q9u_A A-type flavoprotein; fl 99.2 3E-11 1E-15 117.5 9.7 106 92-211 41-161 (414)
56 4hl2_A Beta-lactamase NDM-1; s 99.2 5.7E-12 1.9E-16 113.7 3.3 109 92-212 48-172 (243)
57 3r2u_A Metallo-beta-lactamase 99.2 1E-10 3.5E-15 115.8 12.3 117 81-214 25-155 (466)
58 3aj3_A MLR6805 protein, 4-pyri 99.2 1.3E-11 4.4E-16 113.2 3.8 109 92-213 35-196 (274)
59 2y8b_A Metallo-B-lactamase; hy 99.1 3.6E-10 1.2E-14 103.4 13.2 106 92-212 68-188 (265)
60 4dik_A Flavoprotein; TM0755, e 99.1 2.7E-10 9.3E-15 110.8 13.0 104 93-211 53-172 (410)
61 1ztc_A Hypothetical protein TM 99.1 6.8E-11 2.3E-15 105.2 7.7 112 90-214 33-164 (221)
62 2fhx_A SPM-1; metallo-beta-lac 99.1 2.1E-10 7.1E-15 103.3 10.8 170 92-329 30-232 (246)
63 3iog_A Beta-lactamase; hydrola 99.1 6.1E-10 2.1E-14 98.8 13.6 112 91-212 22-157 (227)
64 3h3e_A Uncharacterized protein 99.1 6.8E-10 2.3E-14 101.7 11.6 51 298-355 217-267 (267)
65 1p9e_A Methyl parathion hydrol 99.1 8E-11 2.7E-15 111.4 5.4 153 44-214 58-246 (331)
66 1jjt_A IMP-1 metallo beta-lact 99.1 1.6E-10 5.5E-15 103.2 6.3 102 92-212 33-149 (228)
67 3esh_A Protein similar to meta 99.0 1.6E-10 5.6E-15 106.4 5.9 115 93-214 49-197 (280)
68 4eyb_A Beta-lactamase NDM-1; m 98.9 4.2E-10 1.4E-14 103.3 1.7 108 92-212 75-199 (270)
69 2p97_A Hypothetical protein; p 98.8 1.5E-08 5E-13 88.7 9.0 97 92-212 24-129 (201)
70 2cfu_A SDSA1; SDS-hydrolase, l 98.8 2E-08 6.7E-13 103.4 10.8 119 92-212 123-290 (658)
71 2yhe_A SEC-alkyl sulfatase; hy 98.1 3.3E-09 1.1E-13 109.0 0.0 121 91-213 132-302 (668)
72 2i7t_A Cleavage and polyadenyl 38.7 44 0.0015 31.8 6.0 26 293-318 394-419 (459)
73 2xr1_A Cleavage and polyadenyl 37.5 44 0.0015 33.6 6.0 57 293-353 581-639 (640)
74 2ycb_A Beta-CAsp RNAse, cleava 34.4 49 0.0017 33.2 5.7 56 293-352 577-634 (636)
75 3af5_A Putative uncharacterize 33.2 56 0.0019 32.9 5.9 57 292-352 591-649 (651)
76 3e8x_A Putative NAD-dependent 25.2 2.9E+02 0.0098 22.8 9.8 62 249-316 68-129 (236)
77 2az4_A Hypothetical protein EF 22.0 68 0.0023 30.0 4.0 49 293-352 380-428 (429)
78 3bk2_A RNAse J, metal dependen 21.3 1.1E+02 0.0038 30.0 5.5 59 292-353 380-439 (562)
No 1
>3jxp_A Coenzyme PQQ synthesis protein B; alpha-beta protein, PQQ biosynthesis, transport, biosyntheti; 2.20A {Pseudomonas putida} SCOP: d.157.1.6 PDB: 1xto_A
Probab=100.00 E-value=1.5e-43 Score=335.85 Aligned_cols=257 Identities=11% Similarity=0.126 Sum_probs=191.7
Q ss_pred CcccccccchHHHHHHhHHHHHHHHHhhhhcc-ccccCcCeEEEEEeecCceEEEEe--CCcE-EEEecCCCCccc----
Q 018507 42 LNALKSAGFLSSISRAIDEEEEYRKARAAVVR-KGIDLEGYTIEGVSIGGHETCVII--PELK-CAFDIGRCPTRA---- 113 (355)
Q Consensus 42 ~~~~lGtG~~~gip~~~c~c~~C~~ar~~~~~-~s~~~~~~~i~~~~~g~~~s~~~i--~~~~-iLID~G~~~~~~---- 113 (355)
..++||||+++|+|+++|+|++|++||+...+ + .|+++|+++ ++.+ +|||||++++.+
T Consensus 4 ~~~~LGtg~s~G~P~~~C~C~~C~~a~~~~~~~~--------------~R~~ss~li~~~~~~~iLiD~G~~~~~~l~~~ 69 (321)
T 3jxp_A 4 YIQVLGSAAGGGFPQWNCNCVNCKGYRDGTLKAT--------------ARTQSSIALSDDGVHWILCNASPDIRAQLQAF 69 (321)
T ss_dssp EEEEEECBCTTTBTTTTCCSHHHHHHHHTCSCCC--------------CBCBCEEEEESSSSSEEEECCCTTHHHHHHTC
T ss_pred EEEEEEeCCCCCCCcCCcCCccchhhhhCCCCCC--------------cccceEEEEEeCCceEEEEeCCchHHHHHHhc
Confidence 34589999999999999999999999975433 2 145677887 4455 999999987532
Q ss_pred -----------cccCEEEeccCCccccCChHHHHHHhCcCCCCCCEEecChhhHHHHHHHHHHHHhcCCCcCceeEEEcC
Q 018507 114 -----------IQQNFVFITHGHLDHIGGLPMYVASRGLYNLKPPTIFVPPSIKEDVEKLFEIHRSLGNVELNLDLVALD 182 (355)
Q Consensus 114 -----------~~id~I~lTH~H~DHi~GL~~l~~~~~~~~~~~~~Iy~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 182 (355)
.+|++|||||.|+||++|++.++. ..+++||+++.+.+.++..+..+..+......+++++++
T Consensus 70 ~~l~~~~~~~~~~i~~i~lTH~H~DH~~gl~~l~~------~~~~~vy~~~~~~~~l~~~~~~f~~~~~~~~~i~~~~i~ 143 (321)
T 3jxp_A 70 APMQPARALRDTGINAIVLLDSQIDHTTGLLSLRE------GCPHQVWCTDMVHQDLTTGFPLFNMLSHWNGGLQWNRIE 143 (321)
T ss_dssp GGGCCCSSSSCCSEEEEECSCCCHHHHGGGGGGGG------GCCEEEEECHHHHHHTTTTSCHHHHHTTTTTCEEEEECC
T ss_pred ccccccccCCcccCCEEEECCCChhhhhhHHHHHh------cCCCeEEECHHHHHHHHhhCccccccccccCceeEEEcC
Confidence 258999999999999999998842 246889999999888875332222112111236888999
Q ss_pred CCCeeee---cCCeEEEEEEcC--------CC-----CCCeEEEEEE-cchhhhhhhcccchHHHHHHHhcCceecceee
Q 018507 183 VGETYEM---RNDIVVRPFKTH--------HV-----IPSQGYVIYL-LRKKLKKQYIHLKGKQIEKLKKSGVEITDIIL 245 (355)
Q Consensus 183 ~g~~~~i---~~g~~v~~~~~~--------H~-----~~~~g~~i~~-~~~~l~~~~~~~~~~~~~~Lk~~G~~i~~~~~ 245 (355)
+++++.+ + +++|+++++. |+ .+++||+|+. .+
T Consensus 144 ~g~~~~i~~~~-~~~V~~~~v~H~~~~~~~H~~~~~~~~~~Gy~i~~~~~------------------------------ 192 (321)
T 3jxp_A 144 LEGSFVIDACP-NLKFTPFPLRSAAPPYSPHRFDPHPGDNLGLMVEDTRT------------------------------ 192 (321)
T ss_dssp SSSCEECTTST-TEEEEEEEECCCCCTTCTTTTSCCTTSEEEEEEEETTT------------------------------
T ss_pred CCCeEEeccCC-CeEEEEEEecCCccccccccccccCCCcEEEEEEecCC------------------------------
Confidence 9999999 7 9999999997 65 4799999973 11
Q ss_pred CCeEEEEcCCCCCccCCccccccCCCCEEEEecccCCCcccH------HHHhhcCCCcHH---HHHHHHHHcCCCeEEEE
Q 018507 246 SPEVAFTGDTTSEFMLNPRNADALRAKILITEATFLDDEMSI------EHAQQHGHTHLS---EIIENAKWIRNKAVLLT 316 (355)
Q Consensus 246 ~~~i~y~gDt~~~~~~~~~~~~~~~~d~Li~e~t~~~~~~~~------~~a~~~~H~~~~---~a~~~~~~~~~k~~vlt 316 (355)
+++++|+||+... .....+.++++|+||+||||..+..+. +.+..++|++.+ +|+++++++++|+++||
T Consensus 193 g~~i~y~~Dt~~~--~~~~~~~~~~~D~li~eat~~~d~e~~~~glk~r~~~~~gH~s~~~~~eA~~~a~~~~~k~lvLt 270 (321)
T 3jxp_A 193 GGKLFYAPGLGQV--DEKLLAMMHGADCLLVDGTLWEDDEMQRRGVGTRTGREMGHLAQNGPGGTLEVLDGFPRQRKVLI 270 (321)
T ss_dssp CCEEEEESSCCCC--CHHHHHHHHHCSEEEEECCCSSTTHHHHHTSCSCCCC-CCCCCSSSTTCHHHHHTTCSSSEEEEE
T ss_pred CcEEEEECCCCCC--CHHHHHHhcCCCEEEEeCCCCCcHHHhhccccccccCCCcccCCCCHHHHHHHHHhCCCCeEEEE
Confidence 1389999999862 223345677899999999987654211 112457999999 99999999999999999
Q ss_pred ecCCCCChhHHHHHHHHhcccccCceeeccccccccc
Q 018507 317 HFSSRYHIEDIRQAVLKLQSKVSAKVVPLTEGFKSVY 353 (355)
Q Consensus 317 H~s~~~~~~~l~~~~~~~~~~~~~~v~~a~dGl~~~~ 353 (355)
|+|++++. +.+..+++++.++.+|++|||||++..
T Consensus 271 H~s~~np~--l~~~~~e~~~~~~~~v~~A~DGm~i~~ 305 (321)
T 3jxp_A 271 HINNTNPI--LDENSPERAEVLRRGVEVAFDGMSIEL 305 (321)
T ss_dssp SBCTTCGG--GSTTCHHHHHHHHTTEEECCTTCEEEE
T ss_pred EeCCCCcc--cccchHHHHHhhcCCcEEecCCcEEEe
Confidence 99999863 111111222334679999999999875
No 2
>3g1p_A Protein PHNP; C-P lyase, phosphodiesterase, phosphonate utilization, alkylphosphonate uptake; 1.40A {Escherichia coli} PDB: 3p2u_A
Probab=100.00 E-value=2e-40 Score=305.04 Aligned_cols=239 Identities=16% Similarity=0.193 Sum_probs=182.8
Q ss_pred CcccccccchHHHHHHhHHHHHHHHHhhhhccccccCcCeEEEEEeecCceEEEEe--CCcEEEEecCCCC-ccc---cc
Q 018507 42 LNALKSAGFLSSISRAIDEEEEYRKARAAVVRKGIDLEGYTIEGVSIGGHETCVII--PELKCAFDIGRCP-TRA---IQ 115 (355)
Q Consensus 42 ~~~~lGtG~~~gip~~~c~c~~C~~ar~~~~~~s~~~~~~~i~~~~~g~~~s~~~i--~~~~iLID~G~~~-~~~---~~ 115 (355)
..++||||+++|||+++|+|++|++||..+... ++++|+++ ++..+|||||... ... .+
T Consensus 4 ~~~~LGtg~~~g~P~~~c~C~~C~~ar~~~~~~---------------r~~s~~li~~~~~~iLiD~G~~~~~~~~~~~~ 68 (258)
T 3g1p_A 4 TLTLTGTGGAQGVPAWGCECAACARARRSPQYR---------------RQPCSGVVKFNDAITLIDAGLHDLADRWSPGS 68 (258)
T ss_dssp EEEEEECBCSSCBSCTTCCSHHHHHHHHCGGGC---------------BCBSEEEEEETTEEEEECCCCTTHHHHCCTTS
T ss_pred EEEEEEeCCCCCCccCCcCChhhhhhhhCcccc---------------ccCceEEEEECCcEEEEECCchHHHhhcCccc
Confidence 455899999999999999999999998754322 45667776 5789999999443 222 27
Q ss_pred cCEEEeccCCccccCChHHHHHHhCcCCCCCCEEecChhhHHHHHHHHHHHHhcCCCcCceeE-EEcCCCCeeeecCCeE
Q 018507 116 QNFVFITHGHLDHIGGLPMYVASRGLYNLKPPTIFVPPSIKEDVEKLFEIHRSLGNVELNLDL-VALDVGETYEMRNDIV 194 (355)
Q Consensus 116 id~I~lTH~H~DHi~GL~~l~~~~~~~~~~~~~Iy~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~l~~g~~~~i~~g~~ 194 (355)
||+||+||.|+||++|+..+.. ....+++||+++.+... ... +.. ....++ +.+++++.++++ +++
T Consensus 69 id~IliTH~H~DHi~gl~~l~~----~~~~~~~v~~~~~~~~~-~~~------~~~-~~~~~~~~~~~~g~~~~~g-~~~ 135 (258)
T 3g1p_A 69 FQQFLLTHYHMDHVQGLFPLRW----GVGDPIPVYGPPDEQGC-DDL------FKH-PGLLDFSHTVEPFVVFDLQ-GLQ 135 (258)
T ss_dssp SCEEECSCCCHHHHGGGTTTTT----CSSSCEEEEECCCSSCS-TTT------TTS-CTTEEEEEECCTTCCEEET-TEE
T ss_pred CCEEEEccCchhHhCCHHHHhc----cCCCCeEEEeChhhhhH-HHH------hcC-CCccccccccCCCCeEEEC-CEE
Confidence 9999999999999999977632 12346889999887511 111 111 111233 578899999996 999
Q ss_pred EEEEEcCCCCCCeEEEEEEcchhhhhhhcccchHHHHHHHhcCceecceeeCCeEEEEcCCCCCccCCcccccc--CCCC
Q 018507 195 VRPFKTHHVIPSQGYVIYLLRKKLKKQYIHLKGKQIEKLKKSGVEITDIILSPEVAFTGDTTSEFMLNPRNADA--LRAK 272 (355)
Q Consensus 195 v~~~~~~H~~~~~g~~i~~~~~~l~~~~~~~~~~~~~~Lk~~G~~i~~~~~~~~i~y~gDt~~~~~~~~~~~~~--~~~d 272 (355)
|+++++.|+.+++||+|+.++ ++++|+||+...+ +...+.+ .++|
T Consensus 136 v~~~~~~H~~~~~g~~i~~~~-------------------------------~~i~~~GDt~~~~--~~~~~~l~~~~~D 182 (258)
T 3g1p_A 136 VTPLPLNHSKLTFGYLLETAH-------------------------------SRVAWLSDTAGLP--EKTLKFLRNNQPQ 182 (258)
T ss_dssp EEEEECCSSSCCEEEEEECSS-------------------------------CEEEEECSCSSCC--HHHHHHHHHTCCS
T ss_pred EEEEECCCCCCceEEEEEeCC-------------------------------cEEEEECCCCCCC--HHHHHHHHhCCCC
Confidence 999999999999999998542 3799999998722 1122344 6899
Q ss_pred EEEEecccCCCcccHHHHhhcCCCcHHHHHHHHHHcCCCeEEEEecCCCCChhHHHHHHHHhcccccCceeecccccccc
Q 018507 273 ILITEATFLDDEMSIEHAQQHGHTHLSEIIENAKWIRNKAVLLTHFSSRYHIEDIRQAVLKLQSKVSAKVVPLTEGFKSV 352 (355)
Q Consensus 273 ~Li~e~t~~~~~~~~~~a~~~~H~~~~~a~~~~~~~~~k~~vltH~s~~~~~~~l~~~~~~~~~~~~~~v~~a~dGl~~~ 352 (355)
+||+|++|.++.. ...+|+++++++++++++++++++++|++++++.+. +.+.++.+|++|||||++.
T Consensus 183 lli~e~t~~~~~~-----~~~~H~~~~~a~~~~~~~~~k~lil~H~s~~~~~~~-------~~~~~~~~v~~a~Dg~~~~ 250 (258)
T 3g1p_A 183 VMVMDCSHPPRAD-----APRNHCDLNTVLALNQVIRSPRVILTHISHQFDAWL-------MENALPSGFEVGFDGMEIG 250 (258)
T ss_dssp EEEEECCBSSCSS-----CCSSSCBHHHHHHHHHHHCCSCEEEESCCHHHHHHH-------TTCCCCTTEEECCTTEEEC
T ss_pred EEEEeCCCCCccc-----cCCCCCCHHHHHHHHHHcCCCEEEEECccCccchhh-------hhhhCCCCeEEccCCCEEe
Confidence 9999999986541 357899999999999999999999999999886432 2346778999999999987
Q ss_pred c
Q 018507 353 Y 353 (355)
Q Consensus 353 ~ 353 (355)
.
T Consensus 251 ~ 251 (258)
T 3g1p_A 251 V 251 (258)
T ss_dssp -
T ss_pred e
Confidence 5
No 3
>3md7_A Beta-lactamase-like; ssgcid, hydrolase, structural genomics, structural genomics center for infectious disease; HET: 5GP TLA; 1.27A {Brucella melitensis biovar abortus} PDB: 3qh8_A* 3py6_A* 3py5_A*
Probab=100.00 E-value=5.9e-40 Score=307.48 Aligned_cols=242 Identities=17% Similarity=0.176 Sum_probs=190.4
Q ss_pred CCcccccccchHHHHHHhHHHHHHHHHhhhhccccccCcCeEEEEEeecCceEEEEeC----C---cEEEEecCCCCccc
Q 018507 41 PLNALKSAGFLSSISRAIDEEEEYRKARAAVVRKGIDLEGYTIEGVSIGGHETCVIIP----E---LKCAFDIGRCPTRA 113 (355)
Q Consensus 41 ~~~~~lGtG~~~gip~~~c~c~~C~~ar~~~~~~s~~~~~~~i~~~~~g~~~s~~~i~----~---~~iLID~G~~~~~~ 113 (355)
+...+||||++.|+|+++|+|++|++++.+.. |+++|+++. + ..+|||||++.+.+
T Consensus 29 m~v~~LG~g~~~G~P~~~c~c~~C~~~~~~~~-----------------R~~~s~li~~~~~~g~~~~iLID~G~~~~~~ 91 (293)
T 3md7_A 29 LRFTLLGCGSSPGVPRINGDWGKCDPKNPKNR-----------------RRRASLLVERYDAEGNNTVVVIDTGPDFRMQ 91 (293)
T ss_dssp EEEEEEECBCTTCBSCTTCCCTTSCTTCGGGC-----------------BCBCEEEEEEECTTCCEEEEEECCCTTHHHH
T ss_pred EEEEEEeecCCCCcccCCCCCccCCccCCCCc-----------------ccccEEEEEecCCCCceeEEEEECCccHHHH
Confidence 44558999999999999999999999864322 234455654 3 58999999998765
Q ss_pred c------ccCEEEeccCCccccCChHHHHHHhCcCCCCCCEEecChhhHHHHHHHHHHHHhc-C--CCcCceeEEEcCCC
Q 018507 114 I------QQNFVFITHGHLDHIGGLPMYVASRGLYNLKPPTIFVPPSIKEDVEKLFEIHRSL-G--NVELNLDLVALDVG 184 (355)
Q Consensus 114 ~------~id~I~lTH~H~DHi~GL~~l~~~~~~~~~~~~~Iy~~~~~~~~l~~~~~~~~~~-~--~~~~~~~~~~l~~g 184 (355)
+ +||+|||||.|+||++|++.|+.... ....+++||+++.+.+.+++.+.+.... . .....++++.++++
T Consensus 92 l~~~~~~~id~IliTH~H~DHi~Gl~~l~~~~~-~~~~~~~vy~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~g 170 (293)
T 3md7_A 92 MIDSGVHMLDAAVYTHPHADHIHGIDDLRTYVV-DNGRLMDVYANRLTRNRLYDTFGYCFETPVGSSYPPILSMHDIAPE 170 (293)
T ss_dssp HHHHTCCCCSEEECSCCCHHHHTTGGGGHHHHH-HHTSCEEEEECHHHHHHHHHHCGGGTSCCTTCCCCCCEEEEECCTT
T ss_pred HHhcCCCcccEEEEcCCCchhhCCHHHHHHHhh-cCCCceEEEECHHHHHHHHHhhhhhhccccccCCCCceEEEEcCCC
Confidence 4 69999999999999999998865321 1245789999999999888765433211 0 01123578899999
Q ss_pred CeeeecCC----eEEEEEEcCCC-CCCeEEEEEEcchhhhhhhcccchHHHHHHHhcCceecceeeCCeEEEEcCCCCCc
Q 018507 185 ETYEMRND----IVVRPFKTHHV-IPSQGYVIYLLRKKLKKQYIHLKGKQIEKLKKSGVEITDIILSPEVAFTGDTTSEF 259 (355)
Q Consensus 185 ~~~~i~~g----~~v~~~~~~H~-~~~~g~~i~~~~~~l~~~~~~~~~~~~~~Lk~~G~~i~~~~~~~~i~y~gDt~~~~ 259 (355)
++++++ + ++|+++++.|. .+++||+|+ +++|+||+..
T Consensus 171 ~~~~~g-~~~~~~~v~~~~~~H~~~~~~g~~i~-----------------------------------~~~y~gDt~~-- 212 (293)
T 3md7_A 171 TPFSIE-GAGGAIRFEPFSQVHGDIESLGFRIG-----------------------------------SVVYCTDVSA-- 212 (293)
T ss_dssp CCEEEC-CTTCCEEEEEEEEEETTEEEEEEEET-----------------------------------TEEEECSCSB--
T ss_pred CcEEEC-CCCCcEEEEEEEecCCCCCEEEEEEe-----------------------------------EEEEECCCCC--
Confidence 999996 7 99999999998 599999995 5999999985
Q ss_pred cCCccccccCCCCEEEEecccCCCcccHHHHhhcCCCcHHHHHHHHHHcCCCeEEEEecCCCCChhHHHHHHHHhccccc
Q 018507 260 MLNPRNADALRAKILITEATFLDDEMSIEHAQQHGHTHLSEIIENAKWIRNKAVLLTHFSSRYHIEDIRQAVLKLQSKVS 339 (355)
Q Consensus 260 ~~~~~~~~~~~~d~Li~e~t~~~~~~~~~~a~~~~H~~~~~a~~~~~~~~~k~~vltH~s~~~~~~~l~~~~~~~~~~~~ 339 (355)
..+...+.++++|+||+|+++... ...|++++++++++++++++++++||++++++.+++ .+.++
T Consensus 213 ~~~~~~~~~~~~Dlli~e~~~~~~--------~~~H~~~~~a~~~~~~~~~k~lvl~H~~~~~~~~~~-------~~~~~ 277 (293)
T 3md7_A 213 FPEQSLQYIKDADVLIIGALQYRP--------HPSHFSLGEALEWIEKLSPKRAILTHMHVPLDYETV-------MRETP 277 (293)
T ss_dssp CCGGGHHHHTTCSEEEEECCCSSC--------BTTBCCHHHHHHHHHHHCCSEEEEESBCTTCCHHHH-------HHHSC
T ss_pred CCHHHHHHhcCCCEEEEeCccCCC--------CCCCCCHHHHHHHHHHcCCCEEEEECCCCCCCHHHH-------HhhcC
Confidence 122334577899999999987643 468999999999999999999999999999976443 23456
Q ss_pred Cceeeccccccccc
Q 018507 340 AKVVPLTEGFKSVY 353 (355)
Q Consensus 340 ~~v~~a~dGl~~~~ 353 (355)
.+|.+|+|||++.+
T Consensus 278 ~~v~~a~DG~~i~l 291 (293)
T 3md7_A 278 HHVEPGYDGLRFEV 291 (293)
T ss_dssp TTEEECCTTCEEEE
T ss_pred CCcEEeeCCcEEEe
Confidence 79999999999865
No 4
>3zwf_A Zinc phosphodiesterase ELAC protein 1; beta-lactamase, hydrolase, metal-binding, tRNA processing, zinc-binding, catabolism; 1.70A {Homo sapiens}
Probab=100.00 E-value=2e-37 Score=299.13 Aligned_cols=257 Identities=25% Similarity=0.385 Sum_probs=167.8
Q ss_pred CceEEEEe--CCcEEEEecCCCCcccc--------ccCEEEeccCCccccCChHHHHHHhCcCC-----CCCCEEecChh
Q 018507 90 GHETCVII--PELKCAFDIGRCPTRAI--------QQNFVFITHGHLDHIGGLPMYVASRGLYN-----LKPPTIFVPPS 154 (355)
Q Consensus 90 ~~~s~~~i--~~~~iLID~G~~~~~~~--------~id~I~lTH~H~DHi~GL~~l~~~~~~~~-----~~~~~Iy~~~~ 154 (355)
++.+|+++ ++..+|||||+++..++ +|++|||||.|.||++|++.++..+.+.+ ..+++||+|+.
T Consensus 17 r~~ss~ll~~~~~~iLiD~G~g~~~~l~~~~~~~~~id~I~iTH~H~DHi~gl~~l~~~~~~~~~~~~~~~~l~iygp~~ 96 (368)
T 3zwf_A 17 RGASAVVLRCEGECWLFDCGEGTQTQLMKSQLKAGRITKIFITHLHGDHFFGLPGLLCTISLQSGSMVSKQPIEIYGPVG 96 (368)
T ss_dssp SCSSEEEEEETTEEEEECCCTTHHHHHHHSSSCGGGEEEEECCCSSGGGTTTHHHHHHHHHHHC------CCEEEEEETT
T ss_pred CCccEEEEEECCeEEEEeCChhHHHHHHHcCCChHHCCEEEECCCChHHhCcHHHHHHHhhhccccccCCCCeEEEEcHH
Confidence 44667777 56789999999986542 69999999999999999999986543322 25889999999
Q ss_pred hHHHHHHHHHHHHhcCCCcCceeEEEcCC---------------------------CCe------------eeecCCeEE
Q 018507 155 IKEDVEKLFEIHRSLGNVELNLDLVALDV---------------------------GET------------YEMRNDIVV 195 (355)
Q Consensus 155 ~~~~l~~~~~~~~~~~~~~~~~~~~~l~~---------------------------g~~------------~~i~~g~~v 195 (355)
+.++++..+..... .....+.++++.+ |+. ++. ++++|
T Consensus 97 ~~~~l~~~l~~~~~--~~~~~~~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~-~~~~V 173 (368)
T 3zwf_A 97 LRDFIWRTMELSHT--ELVFHYVVHELVPTADQCPAEELKEFAHVNRADSPPKEEQGRTILLDSEENSYLLFDD-EQFVV 173 (368)
T ss_dssp HHHHHHHHHHHTTC--CCSSCEEEEEECCCGGGSCC-------------------CCCEECCBTTTTBEEEEEC-SSEEE
T ss_pred HHHHHHHHHHhhCc--CCCceEEEEEeecCccccccccccccccccccccCcccccccccccccccCceeEEeC-CCEEE
Confidence 99999887654321 1224456666643 222 232 48999
Q ss_pred EEEEcCCCCCCeEEEEEEcch--hhhh---hhcccc-hHHHHHHHhcCceecc--------------eeeCCeEEEEcCC
Q 018507 196 RPFKTHHVIPSQGYVIYLLRK--KLKK---QYIHLK-GKQIEKLKKSGVEITD--------------IILSPEVAFTGDT 255 (355)
Q Consensus 196 ~~~~~~H~~~~~g~~i~~~~~--~l~~---~~~~~~-~~~~~~Lk~~G~~i~~--------------~~~~~~i~y~gDt 255 (355)
+++++.|.++|+||+|+++++ +++. ...|+| |+++++||+ |..|+. ...|++++|+|||
T Consensus 174 ~a~~~~H~vp~~gy~i~e~~~~g~~~~ek~~~~gip~G~~~~~Lk~-G~~v~~~dG~~i~~~~v~~~~~~g~~v~~~GDT 252 (368)
T 3zwf_A 174 KAFRLFHRIPSFGFSVVEKKRPGKLNAQKLKDLGVPPGPAYGKLKN-GISVVLENGVTISPQDVLKKPIVGRKICILGDC 252 (368)
T ss_dssp EEEEEESSSCEEEEEEEECC-------------------------------------------------CCCEEEEECSC
T ss_pred EEEeccCCCceEEEEEEecCCcCccCHHHHHHcCCCchHHHHhcCC-CCeEEecCCEEEEhHHhccccccceEEEEEecC
Confidence 999999999999999998764 5533 488896 999999998 554442 1237899999999
Q ss_pred CCCccCCccccccCCCCEEEEecccCCCcccHHHHhhcCCCcHHHHHHHHHHcCCCeEEEEecCCCCCh---------hH
Q 018507 256 TSEFMLNPRNADALRAKILITEATFLDDEMSIEHAQQHGHTHLSEIIENAKWIRNKAVLLTHFSSRYHI---------ED 326 (355)
Q Consensus 256 ~~~~~~~~~~~~~~~~d~Li~e~t~~~~~~~~~~a~~~~H~~~~~a~~~~~~~~~k~~vltH~s~~~~~---------~~ 326 (355)
.+. ......+.++++|+||+||||.++. .+.+..++||++++|.+++++++++++++||+|++|.. ++
T Consensus 253 ~~~-~~~~~~~~~~~~Dlli~Eat~~~~~--~~~a~~~~H~t~~~A~~~a~~~~~k~lil~H~s~ry~~~~~~~~~~~~~ 329 (368)
T 3zwf_A 253 SGV-VGDGGVKLCFEADLLIHEATLDDAQ--MDKAKEHGHSTPQMAATFAKLCRAKRLVLTHFSQRYKPVALAREGETDG 329 (368)
T ss_dssp SEE-CSSHHHHHTTTCSEEEEECCSCGGG--HHHHHHTTCCCHHHHHHHHHHTTCSEEEEECBCCCC-------------
T ss_pred Ccc-cchhHHHHhcCCCEEEEecCCChHH--HhhhhcCCCCCHHHHHHHHHHcCCCEEEEEeeCcccCccccccccccch
Confidence 871 1223345778999999999998865 46677899999999999999999999999999999973 24
Q ss_pred HHHHHHHhcccccC-ceeeccccccccc
Q 018507 327 IRQAVLKLQSKVSA-KVVPLTEGFKSVY 353 (355)
Q Consensus 327 l~~~~~~~~~~~~~-~v~~a~dGl~~~~ 353 (355)
+.+..+++++.+++ ++.+|+||+.+..
T Consensus 330 ~~~~~~ea~~~f~~~~~~~a~dg~~~~i 357 (368)
T 3zwf_A 330 IAELKKQAESVLDLQEVTLAEDFMVISI 357 (368)
T ss_dssp --------------CEEEECCTTCEEEC
T ss_pred HHHHHHHHHHhcCCCceEEecCCcEEEe
Confidence 55566666666665 8999999998764
No 5
>2cbn_A Ribonuclease Z; phosphodiesterase beta lactamase tRNAse Z, hydrolase, metal- binding, endonuclease, tRNA processing, zinc; 2.9A {Escherichia coli} SCOP: d.157.1.7
Probab=100.00 E-value=2.6e-35 Score=276.73 Aligned_cols=252 Identities=24% Similarity=0.263 Sum_probs=194.6
Q ss_pred ceEEEEe------CCcEEEEecCCCCccc--------cccCEEEeccCCccccCChHHHHHHhCcCC-CCCCEEecChhh
Q 018507 91 HETCVII------PELKCAFDIGRCPTRA--------IQQNFVFITHGHLDHIGGLPMYVASRGLYN-LKPPTIFVPPSI 155 (355)
Q Consensus 91 ~~s~~~i------~~~~iLID~G~~~~~~--------~~id~I~lTH~H~DHi~GL~~l~~~~~~~~-~~~~~Iy~~~~~ 155 (355)
+.+|+++ ++..+|||||.+...+ .+|++|||||.|+||++|++.++..+.+.+ ..+++||+++.+
T Consensus 19 ~~~~~li~~~~~~~~~~iliD~G~~~~~~l~~~~~~~~~i~~i~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~i~~~~~~ 98 (306)
T 2cbn_A 19 NVTAILLNLQHPTQSGLWLFDCGEGTQHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQPLTIYGPQGI 98 (306)
T ss_dssp CBCEEEEECCCSSCCCEEEECCCTTHHHHHHTSCCCTTTEEEEECSCCCHHHHTTHHHHHHHHHHTTCCSCEEEEESTTH
T ss_pred CCCEEEEEeecCCCCcEEEEECCHHHHHHHHHhCCCHHHcCEEEEecCCchhhCChHHHHHHHHhcCCCCCeEEEcCccH
Confidence 4566666 3468999999987433 268999999999999999999976543332 357899999999
Q ss_pred HHHHHHHHHHHHhcCCCcCceeEEEcCCCCeeeecCCeEEEEEEcCCCCCCeEEEEEEcch--hh---hhhhcccc-hHH
Q 018507 156 KEDVEKLFEIHRSLGNVELNLDLVALDVGETYEMRNDIVVRPFKTHHVIPSQGYVIYLLRK--KL---KKQYIHLK-GKQ 229 (355)
Q Consensus 156 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~g~~~~i~~g~~v~~~~~~H~~~~~g~~i~~~~~--~l---~~~~~~~~-~~~ 229 (355)
.+.++..+..... .....++++++++++.++++ +++|+++++.|..+++||+++..++ ++ +....++| +++
T Consensus 99 ~~~l~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~-~~~v~~~~~~H~~~~~gy~i~~~~~~~~~~~~~~~~~gv~~~~~ 175 (306)
T 2cbn_A 99 REFVETALRISGS--WTDYPLEIVEIGAGEILDDG-LRKVTAYPLEHPLECYGYRIEEHDAPGALNAQALKAAGVPPGPL 175 (306)
T ss_dssp HHHHHHHHHHTTC--CCSSCEEEEECCSEEEEECS-SEEEEEEECBSSSCCEEEEEEECCCCCCBCHHHHHHTTCCSSHH
T ss_pred HHHHHHHHHhhcc--CCCceEEEEEcCCCcEeecC-CEEEEEEEccCCCCccEEEEEecCccCccCHHHHHHcCCCCchH
Confidence 9988876543221 11234578899999999985 9999999999999999999987543 33 23478886 899
Q ss_pred HHHHHhcCceecc--------------eeeCCeEEEEcCCCCCccCCccccccCCCCEEEEecccCCCcccHHHHhhcCC
Q 018507 230 IEKLKKSGVEITD--------------IILSPEVAFTGDTTSEFMLNPRNADALRAKILITEATFLDDEMSIEHAQQHGH 295 (355)
Q Consensus 230 ~~~Lk~~G~~i~~--------------~~~~~~i~y~gDt~~~~~~~~~~~~~~~~d~Li~e~t~~~~~~~~~~a~~~~H 295 (355)
+++|++ |..++- ...+++|+|+||+++.+ ...+.++++|+||+||||.++. .+.+...+|
T Consensus 176 ~~~l~~-g~~v~~~~G~~~~~~~~~~~~~~g~~i~~sgDt~~~~---~~~~~~~~~D~li~E~t~~~~~--~~~a~~~~H 249 (306)
T 2cbn_A 176 FQELKA-GKTITLEDGRQINGADYLAAPVPGKALAIFGDTGPCD---AALDLAKGVDVMVHEATLDITM--EAKANSRGH 249 (306)
T ss_dssp HHHHHH-TCCCEETTTEECCGGGTBCCCCCCCEEEECCSCBSCS---THHHHHTTCSEEEEECCBCGGG--HHHHHHTTC
T ss_pred HHHhcC-CCeEEcCCCcEEcHHHhcCCCCCCCEEEEeCCCCCHH---HHHHHhcCCCEEEEECcCChhh--HhHHhhcCC
Confidence 999987 433321 12467999999999743 2234667999999999998664 345678999
Q ss_pred CcHHHHHHHHHHcCCCeEEEEecCCCCChhHHHHHHHHhcccccCceeecccccccc
Q 018507 296 THLSEIIENAKWIRNKAVLLTHFSSRYHIEDIRQAVLKLQSKVSAKVVPLTEGFKSV 352 (355)
Q Consensus 296 ~~~~~a~~~~~~~~~k~~vltH~s~~~~~~~l~~~~~~~~~~~~~~v~~a~dGl~~~ 352 (355)
+++++|++++++++++++++||||++++..++++..+++.+.++ ++.+|+|||++.
T Consensus 250 ~t~~~a~~~a~~~~~~~lvl~H~s~~~~~~~~~~~~~e~~~~~~-~~~~a~Dg~~~~ 305 (306)
T 2cbn_A 250 SSTRQAATLAREAGVGKLIITHVSSRYDDKGCQHLLRECRSIFP-ATELANDFTVFN 305 (306)
T ss_dssp CBHHHHHHHHHHHTCSEEEEECBCTTCCHHHHHHHHHHHHTTCS-CEEECCTTCEEE
T ss_pred CCHHHHHHHHHHcCCcEEEEEeecCCCCCCchhHHHHHHHHhCC-CcEEcccccEee
Confidence 99999999999999999999999999987555556666655554 799999999875
No 6
>2e7y_A TRNAse Z; tRNA maturation, metallo-beta-lactaMSe, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.97A {Thermotoga maritima} SCOP: d.157.1.7 PDB: 1ww1_A
Probab=100.00 E-value=1.1e-35 Score=275.25 Aligned_cols=259 Identities=29% Similarity=0.450 Sum_probs=199.1
Q ss_pred EEEEeecCceEEEEeCCcEEEEecCCCCccc-----cccCEEEeccCCccccCChHHHHHHhC--cC-CCCCCEEecChh
Q 018507 83 IEGVSIGGHETCVIIPELKCAFDIGRCPTRA-----IQQNFVFITHGHLDHIGGLPMYVASRG--LY-NLKPPTIFVPPS 154 (355)
Q Consensus 83 i~~~~~g~~~s~~~i~~~~iLID~G~~~~~~-----~~id~I~lTH~H~DHi~GL~~l~~~~~--~~-~~~~~~Iy~~~~ 154 (355)
|.....|++++|+.+++..+|||||.+...+ .+|++||+||.|+||++|++.++..+. +. +.++++||+++.
T Consensus 3 i~~~~~g~~~~~~~i~~~~iLiD~G~~~~~~l~~~~~~i~~IliTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~v~~~~~ 82 (280)
T 2e7y_A 3 IIGFSKALFSTWIYYSPERILFDAGEGVSTTLGSKVYAFKYVFLTHGHVDHIAGLWGVVNIRNNGMGDREKPLDVFYPEG 82 (280)
T ss_dssp EEEEEETTTEEEEEEGGGTEEEEECTTHHHHHGGGGGGCCEEECSCCCHHHHTTHHHHHHHHHHHSGGGCCCEEEEEETT
T ss_pred EEEEecCCceEEEEECCcEEEEECCcchHHHhccCccCCCEEEEeCCchhHHCCHHHHHHHHHHhccCCCCCCEEEECcc
Confidence 5566778889999997788999999987433 379999999999999999999864322 11 245689999999
Q ss_pred hHHHHHHHHHHHHhcC-CCcCceeEEEcCCCCeeeecC----CeEEEEEEcCCCCC--CeEEEEEEcchhhhhhhcccch
Q 018507 155 IKEDVEKLFEIHRSLG-NVELNLDLVALDVGETYEMRN----DIVVRPFKTHHVIP--SQGYVIYLLRKKLKKQYIHLKG 227 (355)
Q Consensus 155 ~~~~l~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~i~~----g~~v~~~~~~H~~~--~~g~~i~~~~~~l~~~~~~~~~ 227 (355)
+. .++..+.....+. ......+++.+++|+.+.+++ +++|+++++.|+.+ ++||+|+..+++++..+.|+++
T Consensus 83 ~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~v~~~~~~H~~~~~~~g~~i~~~~~~l~~~~~g~~~ 161 (280)
T 2e7y_A 83 NR-AVEEYTEFIKRANPDLRFSFNVHPLKEGERVFLRNAGGFKRYVQPFRTKHVSSEVSFGYHIFEVRRKLKKEFQGLDS 161 (280)
T ss_dssp CH-HHHHHHHHHHHHCGGGTTTEEEEEECTTCCEECCCSSCSCEEEEEEECCSCSSSCCEEEEEEEEEEEECGGGTTCCH
T ss_pred HH-HHHHHHHHHhhcccCCCCceEEEEcCCCCEEEeCCcccCCEEEEEEEccCCCCCceEEEEEEEcccccCHhhcCCCH
Confidence 98 7776654432221 111235778899999999964 79999999999998 9999998877788888999999
Q ss_pred HHHHHHH-hcCce-ecceeeCCeEEEEcCCCCCccCCccccccCCCCEEEEecccCCCcccHHHHhhcCCCcHHHHHHHH
Q 018507 228 KQIEKLK-KSGVE-ITDIILSPEVAFTGDTTSEFMLNPRNADALRAKILITEATFLDDEMSIEHAQQHGHTHLSEIIENA 305 (355)
Q Consensus 228 ~~~~~Lk-~~G~~-i~~~~~~~~i~y~gDt~~~~~~~~~~~~~~~~d~Li~e~t~~~~~~~~~~a~~~~H~~~~~a~~~~ 305 (355)
+++.+|+ ..|.. ++....+++++|+|||.+. ..+.++++|+||+||||.+... ....+|++++++++++
T Consensus 162 ~~~~~l~~~~g~~~~~~~~~g~~i~ysgDt~~~-----~~~~~~~~d~li~e~t~~~~~~----~~~~~H~t~~~a~~~~ 232 (280)
T 2e7y_A 162 KEISRLVKEKGRDFVTEEYHKKVLTISGDSLAL-----DPEEIRGTELLIHECTFLDARD----RRYKNHAAIDEVMESV 232 (280)
T ss_dssp HHHHHHHHHHCTGGGEEEEEEEEEEECCSCSSC-----CHHHHTTCSCEEEECCBC------------CCCBHHHHHHHH
T ss_pred HHHHHHHhhcCCceecCCccCCEEEEECCCChH-----HHHhhcCCCEEEEeCCcCChhh----HHhcCCCCHHHHHHHH
Confidence 9999998 34532 3333455689999999985 2345679999999999986541 1267999999999999
Q ss_pred HHcCCCeEEEEecCCCCChhHHHHHHHHhcccccC-ceeecccccccc
Q 018507 306 KWIRNKAVLLTHFSSRYHIEDIRQAVLKLQSKVSA-KVVPLTEGFKSV 352 (355)
Q Consensus 306 ~~~~~k~~vltH~s~~~~~~~l~~~~~~~~~~~~~-~v~~a~dGl~~~ 352 (355)
++++++++++||++++++. ++++.++++++.+++ +|.+|+||+++.
T Consensus 233 ~~~~~~~lvl~H~~~~~~~-~~~~~~~~~~~~~~~~~v~~a~~G~~~~ 279 (280)
T 2e7y_A 233 KAAGVKKVILYHISTRYIR-QLKSVIKKYREEMPDVEILYMDPRKVFE 279 (280)
T ss_dssp HHHTCCEEEEESCCGGGHH-HHHHHHHHHHHHCTTSEEEECCTTSCEE
T ss_pred HHcCCCEEEEEeecCcCcc-hHHHHHHHHHHhCCCceEEEeCCCceee
Confidence 9999999999999999864 455666666666665 899999999875
No 7
>1y44_A Ribonuclease Z; zinc-dependent metal hydrolase, hydrolase; HET: MES; 2.10A {Bacillus subtilis} SCOP: d.157.1.7 PDB: 2fk6_A*
Probab=100.00 E-value=1.5e-34 Score=273.47 Aligned_cols=254 Identities=24% Similarity=0.303 Sum_probs=179.8
Q ss_pred ceEEEEe-----CCcEEEEecCCCCccc--------cccCEEEeccCCccccCChHHHHHHhCcCC-CCCCEEecChhhH
Q 018507 91 HETCVII-----PELKCAFDIGRCPTRA--------IQQNFVFITHGHLDHIGGLPMYVASRGLYN-LKPPTIFVPPSIK 156 (355)
Q Consensus 91 ~~s~~~i-----~~~~iLID~G~~~~~~--------~~id~I~lTH~H~DHi~GL~~l~~~~~~~~-~~~~~Iy~~~~~~ 156 (355)
+.+|+++ ++..+|||||.+...+ .+|++|||||.|+||++|++.++..+.+.+ ..+++||+++.+.
T Consensus 18 ~~~~~li~~~~~~~~~iLiD~G~~~~~~l~~~~~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~v~~~~~~~ 97 (320)
T 1y44_A 18 NVTSVALKLLEERRSVWLFDCGEATQHQMLHTTIKPRKIEKIFITHMHGDHVYGLPGLLGSRSFQGGEDELTVYGPKGIK 97 (320)
T ss_dssp CBCEEEEEETTTTSEEEEECCCTTHHHHHTTSSCCGGGEEEEECSBCCGGGTTTHHHHHHHHHHTTCCSCEEEEESTTHH
T ss_pred CCCEEEEEEecCCCcEEEEECCHHHHHHHHHcCCCHHHcCEEEEeCCChhhhCCHHHHHHHHHhcCCCCCEEEEeCHHHH
Confidence 4566666 4468999999886432 168999999999999999999876543322 3578999999999
Q ss_pred HHHHHHHHHHHhcCCCcCceeEEEcCCCCeeeecCCeEEEEEEcCCCCCCeEEEEEEcch--hhh---hhhcccc-hHHH
Q 018507 157 EDVEKLFEIHRSLGNVELNLDLVALDVGETYEMRNDIVVRPFKTHHVIPSQGYVIYLLRK--KLK---KQYIHLK-GKQI 230 (355)
Q Consensus 157 ~~l~~~~~~~~~~~~~~~~~~~~~l~~g~~~~i~~g~~v~~~~~~H~~~~~g~~i~~~~~--~l~---~~~~~~~-~~~~ 230 (355)
+.++..+..... .....++++++++++.++++ +++|+++|+.|+.+++||+++..++ +++ ..+.|+| ++++
T Consensus 98 ~~l~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~-~~~v~~~p~~H~~~~~gy~i~~~~~~~~~~~~~~~~~g~~~g~~~ 174 (320)
T 1y44_A 98 AFIETSLAVTKT--HLTYPLAIQEIEEGIVFEDD-QFIVTAVSVIHGVEAFGYRVQEKDVPGSLKADVLKEMNIPPGPVY 174 (320)
T ss_dssp HHHHHHHHHTTC--CCSSCEEEEECCSEEEEECS-SEEEEEEECBSSSSBEEEEEEECCBCCCC----------------
T ss_pred HHHHHHHHhhcc--CCCCceEEEEcCCCceEecC-CEEEEEEEccCCCCcceEEEecCCCcCccCHHHHHHcCCCCchhH
Confidence 988876543211 11234578889999999986 8999999999999999999986543 332 2467886 8899
Q ss_pred HHHHhcCceecc--------------eeeCCeEEEEcCCCCCccCCccccccCCCCEEEEecccCCCcccHHHHhhcCCC
Q 018507 231 EKLKKSGVEITD--------------IILSPEVAFTGDTTSEFMLNPRNADALRAKILITEATFLDDEMSIEHAQQHGHT 296 (355)
Q Consensus 231 ~~Lk~~G~~i~~--------------~~~~~~i~y~gDt~~~~~~~~~~~~~~~~d~Li~e~t~~~~~~~~~~a~~~~H~ 296 (355)
.+|++ |..|+- ...+++++|+||+++.+ ...+.++++|+||+||||.++. .+.+...+|+
T Consensus 175 ~~l~~-g~~v~~~~G~i~~~~~~~~~~~~g~~i~~sgDt~~~~---~~~~~~~~~D~li~E~t~~~~~--~~~a~~~~H~ 248 (320)
T 1y44_A 175 QKIKK-GETVTLEDGRIINGNDFLEPPKKGRSVVFSGDTRVSD---KLKELARDCDVMVHEATFAKED--RKLAYDYYHS 248 (320)
T ss_dssp -----------------------CCCCBCCCEEEECCSCBCCH---HHHHHTTTCSEEEEECCBCTTC--HHHHHHTTCC
T ss_pred HHhhC-CCeEEcCCCeEEcHHHhcccCCCCCEEEEeCCCCCHH---HHHHHhCCCCEEEEeccCCcch--HhHHhhcCCC
Confidence 99986 543331 12467999999999743 2234567899999999998765 3556789999
Q ss_pred cHHHHHHHHHHcCCCeEEEEecCCCCChhHHHHHHHHhcccccCceeecccccccccC
Q 018507 297 HLSEIIENAKWIRNKAVLLTHFSSRYHIEDIRQAVLKLQSKVSAKVVPLTEGFKSVYT 354 (355)
Q Consensus 297 ~~~~a~~~~~~~~~k~~vltH~s~~~~~~~l~~~~~~~~~~~~~~v~~a~dGl~~~~~ 354 (355)
++++|++++++++++++++||||++++..++++..+++.+.+ .++.+|+|||++.+.
T Consensus 249 t~~~a~~~a~~~~~~~lil~H~s~~~~~~~~~~~~~e~~~~~-~~~~~a~dg~~~~l~ 305 (320)
T 1y44_A 249 TTEQAAVTAKEARAKQLILTHISARYQGDASLELQKEAVDVF-PNSVAAYDFLEVNVP 305 (320)
T ss_dssp BHHHHHHHHHHHTCSEEEEECBCTTSCTTHHHHHHHHHHHHC-SSEEECCTTCEEECC
T ss_pred CHHHHHHHHHHcCCCEEEEEeEcCCCCCcchHHHHHHHHHhC-CCcEeccCCCEEEec
Confidence 999999999999999999999999997655555555555444 479999999998764
No 8
>1zkp_A Hypothetical protein BA1088; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.50A {Bacillus anthracis str} SCOP: d.157.1.9
Probab=99.97 E-value=2e-29 Score=232.48 Aligned_cols=212 Identities=17% Similarity=0.170 Sum_probs=163.7
Q ss_pred ceEEEEe--CCcEEEEecCCCCccc-------cccCEEEeccCCccccCChHHHHHHhCcC-----CCCCCEEecChhhH
Q 018507 91 HETCVII--PELKCAFDIGRCPTRA-------IQQNFVFITHGHLDHIGGLPMYVASRGLY-----NLKPPTIFVPPSIK 156 (355)
Q Consensus 91 ~~s~~~i--~~~~iLID~G~~~~~~-------~~id~I~lTH~H~DHi~GL~~l~~~~~~~-----~~~~~~Iy~~~~~~ 156 (355)
+.+|+++ ++..+|||||.+...+ .+|++||+||.|+||++|++.+...+.+. ...+++||+++.+.
T Consensus 42 ~~~~~li~~~~~~iLiD~G~~~~~~l~~~~~~~~i~~v~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 121 (268)
T 1zkp_A 42 ATSGYLFEHDGFRLLVDCGSGVLAQLQKYITPSDIDAVVLSHYHHDHVADIGVLQYARLITSATKGQLPELPIYGHTFDE 121 (268)
T ss_dssp CBSEEEEEETTEEEEECCCTTHHHHHTTTCCGGGCCEEECSCCCHHHHTTHHHHHHHHHHHHHHHCCCCCEEEEECSSSH
T ss_pred CccEEEEEECCcEEEEECCHHHHHHHHHhCCcccCCEEEEecCCchhhCCHHHHHHHHHhcccccCCCCceEEEeCccHH
Confidence 4556776 5678999999875422 26999999999999999999887642221 23568899999998
Q ss_pred HHHHHHHHHHHhcCCCcCceeEEEcCCCCeeeecCCeEEEEEEcCCCCCCeEEEEEEcchhhhhhhcccchHHHHHHHhc
Q 018507 157 EDVEKLFEIHRSLGNVELNLDLVALDVGETYEMRNDIVVRPFKTHHVIPSQGYVIYLLRKKLKKQYIHLKGKQIEKLKKS 236 (355)
Q Consensus 157 ~~l~~~~~~~~~~~~~~~~~~~~~l~~g~~~~i~~g~~v~~~~~~H~~~~~g~~i~~~~~~l~~~~~~~~~~~~~~Lk~~ 236 (355)
+.++... + .....++.+++++.+.++ +++|+++++.|+.+++||+++.++
T Consensus 122 ~~l~~~~-----~---~~~~~~~~~~~g~~~~~g-~~~v~~~~~~H~~~~~~~~i~~~~--------------------- 171 (268)
T 1zkp_A 122 NGFHSLT-----H---EPHTKGIPYNPEETLQIG-PFSISFLKTVHPVTCFAMRITAGN--------------------- 171 (268)
T ss_dssp HHHHTTC-----B---TTTEEEEECCTTSCEEET-TEEEEEEECCSSSCCEEEEEEETT---------------------
T ss_pred HHHHhcc-----c---CCccceEEecCCCeEEEC-CEEEEEEECCCCCCceEEEEEECC---------------------
Confidence 7765421 1 112467788889999996 999999999999999999998643
Q ss_pred CceecceeeCCeEEEEcCCCCCccCCccccccCCCCEEEEecccCCCcccHHHHhhcCCCcHHHHHHHHHHcCCCeEEEE
Q 018507 237 GVEITDIILSPEVAFTGDTTSEFMLNPRNADALRAKILITEATFLDDEMSIEHAQQHGHTHLSEIIENAKWIRNKAVLLT 316 (355)
Q Consensus 237 G~~i~~~~~~~~i~y~gDt~~~~~~~~~~~~~~~~d~Li~e~t~~~~~~~~~~a~~~~H~~~~~a~~~~~~~~~k~~vlt 316 (355)
.+++|+||+.... ...+.++++|+||+|++|.+... ....+|++++++.+++++.++++++++
T Consensus 172 ----------~~i~~~GD~~~~~---~~~~~~~~~d~li~e~~~~~~~~----~~~~~H~~~~~a~~~~~~~~~~~lil~ 234 (268)
T 1zkp_A 172 ----------DIVVYSADSSYIP---EFIPFTKDADLFICECNMYAHQE----AAKAGHMNSTEVASIAKDANVKELLLT 234 (268)
T ss_dssp ----------EEEEECCSCCCCT---THHHHHTTCSEEEEECCBCTTSC----CGGGTCCBHHHHHHHHHHTTCSEEEEE
T ss_pred ----------eEEEEeCCCCCCH---HHHHHHcCCCEEEEECCCCcccc----ccCCCCCCHHHHHHHHHHcCCCEEEEE
Confidence 2799999998732 22345678999999999976542 135679999999999999999999999
Q ss_pred ecCCCCChhHHHHHHHHhcccccCceeecccccccc
Q 018507 317 HFSSRYHIEDIRQAVLKLQSKVSAKVVPLTEGFKSV 352 (355)
Q Consensus 317 H~s~~~~~~~l~~~~~~~~~~~~~~v~~a~dGl~~~ 352 (355)
|++++++.+++.+ ++++.++.+|.+|+||+++.
T Consensus 235 H~~~~~~~~~~~~---~~~~~~~~~v~~a~dg~~~~ 267 (268)
T 1zkp_A 235 HLPHTGNPADLVT---EAKQIFSGHITLAHSGYVWN 267 (268)
T ss_dssp SBCSSSCTHHHHH---HHHTTCCSEEEECCTTCEEE
T ss_pred CCCCCCChHHHHH---HHHHhCCCCEEEEeCCcccc
Confidence 9999987655543 34445566899999999864
No 9
>3kl7_A Putative metal-dependent hydrolase; structural genomics, JOI for structural genomics, JCSG; 2.30A {Parabacteroides distasonis atcc 8503}
Probab=99.86 E-value=2.9e-20 Score=168.27 Aligned_cols=169 Identities=15% Similarity=0.187 Sum_probs=130.7
Q ss_pred EEEEe--CCcEEEEecCCCCccc---cccCEEEeccCCccccCChHHHHHHhCcCCCCCCEEecChhhHHHHHHHHHHHH
Q 018507 93 TCVII--PELKCAFDIGRCPTRA---IQQNFVFITHGHLDHIGGLPMYVASRGLYNLKPPTIFVPPSIKEDVEKLFEIHR 167 (355)
Q Consensus 93 s~~~i--~~~~iLID~G~~~~~~---~~id~I~lTH~H~DHi~GL~~l~~~~~~~~~~~~~Iy~~~~~~~~l~~~~~~~~ 167 (355)
+|+++ ++..+|||+|.+.... .++|+||+||.|.||+ |+..+.... ...++||+++.+.+.++
T Consensus 38 s~~li~~~~~~iliDpg~~~~~~~~~~~id~VliTH~H~DH~-~~~~l~~~~----~~~~~v~~~~~~~~~l~------- 105 (235)
T 3kl7_A 38 GSLMLTYDNHSIQVDPVSEYADYTTFPKADIILITHEHGDHL-DPKAIQAVE----KSDTEIIANENSQKKLG------- 105 (235)
T ss_dssp TEEEEEETTEEEEESCCTTTCCTTSSCCCSEEEECCSSTTTC-CHHHHHHHC----CTTCEEEECHHHHHHHT-------
T ss_pred eEEEEEECCEEEEECCCCCccchhhCCCCCEEEECCCccccC-CHHHHHHhh----cCCCEEEEcHHHHHHhc-------
Confidence 45665 5679999999775322 2799999999999999 777665421 24678999988866542
Q ss_pred hcCCCcCceeEEEcCCCC-eeeecCCeEEEEEEcCCCCC----------CeEEEEEEcchhhhhhhcccchHHHHHHHhc
Q 018507 168 SLGNVELNLDLVALDVGE-TYEMRNDIVVRPFKTHHVIP----------SQGYVIYLLRKKLKKQYIHLKGKQIEKLKKS 236 (355)
Q Consensus 168 ~~~~~~~~~~~~~l~~g~-~~~i~~g~~v~~~~~~H~~~----------~~g~~i~~~~~~l~~~~~~~~~~~~~~Lk~~ 236 (355)
+.+.+++|+ .++++ +++|+++|+.|..+ +.||+|+.++
T Consensus 106 ---------~~~~l~~g~~~~~~g-~~~i~~~p~~H~~~~~~~~~~~~~~~g~~i~~~g--------------------- 154 (235)
T 3kl7_A 106 ---------KGKVLKNGDTDTSIS-YMKIEAVPAYNTTPGRDKYHPRHRDNGYILTFDG--------------------- 154 (235)
T ss_dssp ---------CSEECCTTCEECCST-TCEEEEEECCCCSTTGGGTSCTTTSEEEEEEETT---------------------
T ss_pred ---------CcEEecCCCEEEEEC-CEEEEEEEeecCCCccccccCCCCceEEEEEeCC---------------------
Confidence 235778888 89996 99999999999752 5899998653
Q ss_pred CceecceeeCCeEEEEcCCCCCccCCccccccCCCCEEEEecccCCCcccHHHHhhcCCCcHHHHHHHHHHcCCCeEEEE
Q 018507 237 GVEITDIILSPEVAFTGDTTSEFMLNPRNADALRAKILITEATFLDDEMSIEHAQQHGHTHLSEIIENAKWIRNKAVLLT 316 (355)
Q Consensus 237 G~~i~~~~~~~~i~y~gDt~~~~~~~~~~~~~~~~d~Li~e~t~~~~~~~~~~a~~~~H~~~~~a~~~~~~~~~k~~vlt 316 (355)
.+++|+||+...+. .+.+.++|++++++.. ..|++.++|+++++++++++++++
T Consensus 155 ----------~~i~~~GDt~~~~~----~~~l~~~Dv~il~~~~------------~~h~~~~ea~~~~~~l~~k~vip~ 208 (235)
T 3kl7_A 155 ----------LRVYIAGDTEDIPE----MKDLKDIDIAFLPVNQ------------PYTMTVSQAAKAARMFSPKILYPY 208 (235)
T ss_dssp ----------EEEEECCSCCSCGG----GGGCCSCSEEEEECCT------------TTSCCHHHHHHHHHHHCCSEEEEE
T ss_pred ----------eEEEEECCCCchhh----HHhhcCCCEEEECCCC------------CcccCHHHHHHHHHHcCCCEEEEE
Confidence 27999999987432 2345689999999852 369999999999999999999999
Q ss_pred ecCCCCChhHHHHHH
Q 018507 317 HFSSRYHIEDIRQAV 331 (355)
Q Consensus 317 H~s~~~~~~~l~~~~ 331 (355)
|++. .+.+++.+.+
T Consensus 209 H~~~-~~~~~~~~~l 222 (235)
T 3kl7_A 209 HYGD-TKIGELKDAL 222 (235)
T ss_dssp SCTT-CCTTHHHHHT
T ss_pred cCCC-CCHHHHHHHH
Confidence 9999 5555555433
No 10
>2az4_A Hypothetical protein EF2904; structural genomics, PSI, protein STR initiative, midwest center for structural genomics, MCSG, U function; 2.00A {Enterococcus faecalis} SCOP: d.157.1.10
Probab=99.84 E-value=1.4e-20 Score=184.82 Aligned_cols=175 Identities=13% Similarity=0.135 Sum_probs=117.9
Q ss_pred ccCEEEeccCCccccCChHHHHHHhCcCCCCCCEEecChhhHHHHHHHHHHHH-hcCC----CcCceeEEEcCCCCeeee
Q 018507 115 QQNFVFITHGHLDHIGGLPMYVASRGLYNLKPPTIFVPPSIKEDVEKLFEIHR-SLGN----VELNLDLVALDVGETYEM 189 (355)
Q Consensus 115 ~id~I~lTH~H~DHi~GL~~l~~~~~~~~~~~~~Iy~~~~~~~~l~~~~~~~~-~~~~----~~~~~~~~~l~~g~~~~i 189 (355)
+|++|||||.|.||++|++.+.. +++||+++.+.+.++....... .+.. .....+++.+++++.+.+
T Consensus 84 ~i~~v~lTH~H~DHiggl~~l~~--------~~~iy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 155 (429)
T 2az4_A 84 QHTAVFLSHAHLDHSRMINYLDP--------AVPLYTLKETKMILNSLNRKGDFLIPSPFEEKNFTREMIGLNKNDVIKV 155 (429)
T ss_dssp SEEEEECSCSCHHHHTTGGGBCT--------TSCEEEEHHHHHHHHHHTTTSCSSCCCTTSCTTCCCCCEEECTTCEEEE
T ss_pred cCCEEEECCchHHHhCcHhHhcC--------CCCEEECHHHHHHHHHHHHhCccccccccccccccceEEEeCCCCeEEE
Confidence 58999999999999999987741 4679999999888865321100 0000 012346778889999999
Q ss_pred cCCeEEEEEEcCCC-CCCeEEEEEEcchhhhhhhcccchHHHHHHHhcCceecceeeCCeEEEEcCCCCCccCC----cc
Q 018507 190 RNDIVVRPFKTHHV-IPSQGYVIYLLRKKLKKQYIHLKGKQIEKLKKSGVEITDIILSPEVAFTGDTTSEFMLN----PR 264 (355)
Q Consensus 190 ~~g~~v~~~~~~H~-~~~~g~~i~~~~~~l~~~~~~~~~~~~~~Lk~~G~~i~~~~~~~~i~y~gDt~~~~~~~----~~ 264 (355)
+ +++|++++++|+ .+++||+|+.++ .+++|+||+....... ..
T Consensus 156 g-~~~v~~~~~~H~~~gs~~~~i~~~~-------------------------------~~i~~tGD~~~~~~~~~~~~~~ 203 (429)
T 2az4_A 156 G-EISVEIVPVDHDAYGASALLIRTPD-------------------------------HFITYTGDLRLHGHNREETLAF 203 (429)
T ss_dssp T-TEEEEEEECCCSSTTCEEEEEEETT-------------------------------EEEEECCSCCSSSTTHHHHHHH
T ss_pred C-CEEEEEEECCCCChhhEEEEEEeCC-------------------------------cEEEECCCcccCCCchHHHHHH
Confidence 6 999999999995 569999998653 2799999997532211 12
Q ss_pred ccccCCCCEEEEecccCCCc-ccHHHHhhcCCCcHHHHHHHHHH---cCCCeEEEEecCCCCChhHHHHHH
Q 018507 265 NADALRAKILITEATFLDDE-MSIEHAQQHGHTHLSEIIENAKW---IRNKAVLLTHFSSRYHIEDIRQAV 331 (355)
Q Consensus 265 ~~~~~~~d~Li~e~t~~~~~-~~~~~a~~~~H~~~~~a~~~~~~---~~~k~~vltH~s~~~~~~~l~~~~ 331 (355)
.+.++++|+||+||||.+.. ..... ...+|++..++.+.+.+ .+.++++++|++..+. +.+.+.+
T Consensus 204 ~~~~~~~d~Li~Est~~~~~~~~~~~-~~~~~~s~~~~~~~i~~~~~~~~~rlil~h~~~~~~-~r~~~~a 272 (429)
T 2az4_A 204 CEKAKHTELLMMEGVSISFPEREPDP-AQIAVVSEEDLVQHLVRLELENPNRQITFNGYPANV-ERFAKII 272 (429)
T ss_dssp HHHHTTCSEEEEECCGGGSCCCCCCT-TBCCCCSHHHHHHHHHHHHHTCSSSCEEEEECTTCH-HHHHHHH
T ss_pred HHhccCCCEEEECCCCcCcccccccc-cCCCCCCHHHHHHHHHHHHHhCCCcEEEEEeccchH-HHHHHHH
Confidence 23456999999999997521 00000 02348887776443332 2367899999987653 3344443
No 11
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A*
Probab=99.84 E-value=5.5e-20 Score=186.50 Aligned_cols=202 Identities=19% Similarity=0.170 Sum_probs=136.5
Q ss_pred cCceEEEEeCCcEEEEecCCCCcc-------------------ccccCEEEeccCCccccCChHHHHHHhCcCCCCCCEE
Q 018507 89 GGHETCVIIPELKCAFDIGRCPTR-------------------AIQQNFVFITHGHLDHIGGLPMYVASRGLYNLKPPTI 149 (355)
Q Consensus 89 g~~~s~~~i~~~~iLID~G~~~~~-------------------~~~id~I~lTH~H~DHi~GL~~l~~~~~~~~~~~~~I 149 (355)
|+|..++..++..+|||||..... ..+|++|||||.|.||++|++.++.... ....+++|
T Consensus 29 g~n~~li~~~~~~iLID~G~~~~~~~~~g~~~~~p~~~~l~~~~~~Id~I~iTH~H~DHiggl~~L~~~~~-~~~~~~pI 107 (562)
T 3bk2_A 29 GKNITVFRFRDEIFVLDGGLAFPEEGMPGVDLLIPRVDYLIEHRHKIKAWVLTHGHEDHIGGLPFLLPMIF-GKESPVPI 107 (562)
T ss_dssp SCCEEEEEETTEEEEECCCCBCCCTTSTTCCEEEECCHHHHHTGGGEEEEECCCCCHHHHTTHHHHHHHHH-CSCCCSEE
T ss_pred CCCEEEEEECCeEEEEECCCCCCccccccccccccchhhhhcCcccCcEEEECCCChHHhCCHHHHHHhhc-cccCCceE
Confidence 344444444678999999953211 1268999999999999999999986442 12346789
Q ss_pred ecChhhHHHHHHHHHHHHhcCCCcCceeEEEcCCCCeeeecCC-eEEEEEEcCCC-CCCeEEEEEEcchhhhhhhcccch
Q 018507 150 FVPPSIKEDVEKLFEIHRSLGNVELNLDLVALDVGETYEMRND-IVVRPFKTHHV-IPSQGYVIYLLRKKLKKQYIHLKG 227 (355)
Q Consensus 150 y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~g~~~~i~~g-~~v~~~~~~H~-~~~~g~~i~~~~~~l~~~~~~~~~ 227 (355)
|+++.+.+.++..+.... +. .....++.+++++++.++ + ++|++++++|. +++++|+|+.++
T Consensus 108 y~~~~t~~~l~~~l~~~~-~~--~~~~~~~~v~~g~~~~lg-~~~~v~~~~~~H~~~gs~~~~i~~~~------------ 171 (562)
T 3bk2_A 108 YGARLTLGLLRGKLEEFG-LR--PGAFNLKEISPDDRIQVG-RYFTLDLFRMTHSIPDNSGVVIRTPI------------ 171 (562)
T ss_dssp EEEHHHHHHHHHHHHHTT-CC--STTSEEEEECTTCEEEET-TTEEEEEEECCCSSSSCEEEEEEETT------------
T ss_pred EeCHHHHHHHHHHHHHcC-CC--cCCceEEEECCCCEEEeC-CCEEEEEEECCCCCcccEEEEEEECC------------
Confidence 999999998887665321 11 013578889999999997 6 99999999995 579999998653
Q ss_pred HHHHHHHhcCceecceeeCCeEEEEcCCCCCccCC-------cccc-cc-CCCCEEEEecccCCCcccHHHHhhcCCCcH
Q 018507 228 KQIEKLKKSGVEITDIILSPEVAFTGDTTSEFMLN-------PRNA-DA-LRAKILITEATFLDDEMSIEHAQQHGHTHL 298 (355)
Q Consensus 228 ~~~~~Lk~~G~~i~~~~~~~~i~y~gDt~~~~~~~-------~~~~-~~-~~~d~Li~e~t~~~~~~~~~~a~~~~H~~~ 298 (355)
.+++|+||+..+..+. .... .. +++|+||+|+||..... ....+..+
T Consensus 172 -------------------~~il~tGD~~~~~~~~~g~~~d~~~l~~~~~~~~d~Li~EsT~~~~~g-----~~~~e~~v 227 (562)
T 3bk2_A 172 -------------------GTIVHTGDFKLDPTPIDGKVSHLAKVAQAGAEGVLLLIADATNAERPG-----YTPSEMEI 227 (562)
T ss_dssp -------------------EEEEECCSCCCCSSCTTSCCCCCHHHHHHHHHCCSEEEEECTTTTCCS-----CCCCHHHH
T ss_pred -------------------eEEEEcCCCCCCCCCCCCCcccHHHHHHhhccCCCEEEecccCCCCCC-----CCChHHHH
Confidence 2799999997532211 0111 11 58999999999974320 11122233
Q ss_pred HHH-HHHHHHcCCCeEEEEecCCCCCh-hHHHHHHH
Q 018507 299 SEI-IENAKWIRNKAVLLTHFSSRYHI-EDIRQAVL 332 (355)
Q Consensus 299 ~~a-~~~~~~~~~k~~vltH~s~~~~~-~~l~~~~~ 332 (355)
.+. .+++++.+ ++++++||++++.. +++.+++.
T Consensus 228 ~~~l~~~~~~~~-grvii~~fas~~~r~q~il~~a~ 262 (562)
T 3bk2_A 228 AKELDRVIGRAP-GRVFVTTFASHIHRIQSVIWAAE 262 (562)
T ss_dssp HHHHHHHHHHCS-SCEEEECCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCC-CEEEEEEccccchHHHHHHHHHH
Confidence 333 35555544 79999999988753 34444333
No 12
>3rpc_A Possible metal-dependent hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.49A {Veillonella parvula}
Probab=99.83 E-value=1.1e-19 Score=167.26 Aligned_cols=181 Identities=18% Similarity=0.205 Sum_probs=128.4
Q ss_pred ccCEEEeccCCccccCChHHHHHHhCcCCCCCCEEecC-hhhHHHHHHHHHHHHhcCCCcCceeEEEcCCCCeeeecCCe
Q 018507 115 QQNFVFITHGHLDHIGGLPMYVASRGLYNLKPPTIFVP-PSIKEDVEKLFEIHRSLGNVELNLDLVALDVGETYEMRNDI 193 (355)
Q Consensus 115 ~id~I~lTH~H~DHi~GL~~l~~~~~~~~~~~~~Iy~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~g~~~~i~~g~ 193 (355)
++|+||+||.|.||++++..+.. ....+||++ ..+.+.++.. + . -+++.+ ++.++++ ++
T Consensus 64 ~id~iliTH~H~DH~~~~~~~~~------~~~~~v~~~~~~~~~~l~~~-------g---~-~~~~~~--~~~~~~~-~~ 123 (264)
T 3rpc_A 64 NVTAVVVTHTHLDHWDDTAINSI------PKSLPIFVQNTADKELITSQ-------G---F-IDVRII--FESLEFN-GI 123 (264)
T ss_dssp TCCEEECSCCCGGGSCHHHHHHS------CTTSCEEESSHHHHHHHHHT-------T---C-SCEEEC--SSEEEET-TE
T ss_pred cCCEEEECCCchhhCCCHHHHhh------ccCCeEEEeCHHHHHHHHhc-------C---C-CeeEEe--cccEEEC-CE
Confidence 68999999999999999876642 234669998 7776665432 1 0 133444 5789996 99
Q ss_pred EEEEEEcCCCCC--------------CeEEEEEEcchhhhhhhcccchHHHHHHHhcCceecceeeCCeEEEEcCCCCCc
Q 018507 194 VVRPFKTHHVIP--------------SQGYVIYLLRKKLKKQYIHLKGKQIEKLKKSGVEITDIILSPEVAFTGDTTSEF 259 (355)
Q Consensus 194 ~v~~~~~~H~~~--------------~~g~~i~~~~~~l~~~~~~~~~~~~~~Lk~~G~~i~~~~~~~~i~y~gDt~~~~ 259 (355)
+|+++|+.|..+ ++||+|+.++. ++++|+|||.+.+
T Consensus 124 ~i~~~pa~H~~~~~~~~p~~~~~~~~~~g~~i~~~~~------------------------------~~i~~~GDt~~~~ 173 (264)
T 3rpc_A 124 TLRKTGGSHGTVEMYANPVLAPLAGDAMGVIFEAADE------------------------------PTVYLVGDTVWTS 173 (264)
T ss_dssp EEEEECCCSSCHHHHTSTTHHHHHCCCCEEEEECTTS------------------------------CCEEECCSCCSCH
T ss_pred EEEEeccccCCccccccccccccccccEEEEEEeCCc------------------------------cEEEEECCcCchH
Confidence 999999999863 58999986421 3799999999843
Q ss_pred cCCccccccCCCCEEEEecccCCCcccHHHHhhcCCCcHHHHHHHHHHcCCCeEEEEecCCCC----ChhHHHHHHHHhc
Q 018507 260 MLNPRNADALRAKILITEATFLDDEMSIEHAQQHGHTHLSEIIENAKWIRNKAVLLTHFSSRY----HIEDIRQAVLKLQ 335 (355)
Q Consensus 260 ~~~~~~~~~~~~d~Li~e~t~~~~~~~~~~a~~~~H~~~~~a~~~~~~~~~k~~vltH~s~~~----~~~~l~~~~~~~~ 335 (355)
...+ .....++|++++++...... ......||+.++|+++++.+++++++++|++... +.+++.+.+++.
T Consensus 174 ~~~~-~~~~~~~Dv~il~~g~~~~~----~~~~~~hm~~~ea~~~~~~l~~~~vi~~H~~~~~~~~~~~~~l~~~~~~~- 247 (264)
T 3rpc_A 174 DVEK-ALLRFDPNVIIMNTGYAQIL----GFEDSIIMGTKDIGRMVVRKPEAKIIAVHMDTVNHTATSRKDVRKFIKGN- 247 (264)
T ss_dssp HHHH-HHHHHCCSEEEEECSCBCBT----TCSSCSSCCHHHHHHHHHHCTTSEEEEESCSSSTTBCSCHHHHHHHHHHT-
T ss_pred HHHH-HHHHhCCCEEEEecCccccc----cccCCcccCHHHHHHHHHhCCcCeEEEEccccccccccCHHHHHHHHHHc-
Confidence 2111 11113699999999854321 1114689999999999999999999999999633 234555544432
Q ss_pred ccccCceeecccccccc
Q 018507 336 SKVSAKVVPLTEGFKSV 352 (355)
Q Consensus 336 ~~~~~~v~~a~dGl~~~ 352 (355)
.+..++.++.+|..+.
T Consensus 248 -g~~~~~~~~~~Ge~~~ 263 (264)
T 3rpc_A 248 -NIESHVAVPEDGETIT 263 (264)
T ss_dssp -TCTTTEECCCTTCEEE
T ss_pred -CCCCcEEecCCCCEEe
Confidence 2335789999998764
No 13
>3iek_A Ribonuclease TTHA0252; metallo beta lactamase fold, endonuclease, hydrolase, metal- nuclease, RNA-binding, rRNA processing; HET: FLC; 2.05A {Thermus thermophilus} SCOP: d.157.1.10 PDB: 2dkf_A* 3iel_A* 3iem_A* 2zdf_A* 3idz_A* 2zdd_A* 3ie0_A* 2zde_A* 3ie1_A* 2zdw_A* 3a4y_A* 2yvd_A* 3ie2_A*
Probab=99.83 E-value=1.6e-19 Score=177.46 Aligned_cols=202 Identities=17% Similarity=0.194 Sum_probs=135.6
Q ss_pred EEEEe--CCcEEEEecCCCCccc------------cccCEEEeccCCccccCChHHHHHHhCcCCCCCCEEecChhhHHH
Q 018507 93 TCVII--PELKCAFDIGRCPTRA------------IQQNFVFITHGHLDHIGGLPMYVASRGLYNLKPPTIFVPPSIKED 158 (355)
Q Consensus 93 s~~~i--~~~~iLID~G~~~~~~------------~~id~I~lTH~H~DHi~GL~~l~~~~~~~~~~~~~Iy~~~~~~~~ 158 (355)
+|+++ ++..+|||||...... .+||+|||||+|.||++|++.+... . ...+||+++.+.+.
T Consensus 15 s~~li~~~~~~iLID~G~~~~~~~~~~~~~~~~~~~~Id~VllTH~H~DH~gglp~l~~~-~----~~~~Iy~t~~t~~l 89 (431)
T 3iek_A 15 SAHLLLAGGRRVLLDCGMFQGKEEARNHAPFGFDPKEVDAVLLTHAHLDHVGRLPKLFRE-G----YRGPVYATRATVLL 89 (431)
T ss_dssp CCEEEEETTEEEEECCCCCCGGGGGGGGSCCSSCGGGCCEEECSCCCHHHHTTHHHHHHT-T----CCSCEEECHHHHHH
T ss_pred cEEEEEECCeEEEEeCCCCcchhhccchhhcCCCcccCCEEEECCCChHHhccHHHHHHc-C----CCCeEEEcHHHHHH
Confidence 45555 6789999999833221 1689999999999999999999752 1 23569999999998
Q ss_pred HHHHHHHHHhcCCC-cC--------ceeEEEcCCCCeeeecCCeEEEEEEcCCCCCCeEEEEEEcchhhhhhhcccchHH
Q 018507 159 VEKLFEIHRSLGNV-EL--------NLDLVALDVGETYEMRNDIVVRPFKTHHVIPSQGYVIYLLRKKLKKQYIHLKGKQ 229 (355)
Q Consensus 159 l~~~~~~~~~~~~~-~~--------~~~~~~l~~g~~~~i~~g~~v~~~~~~H~~~~~g~~i~~~~~~l~~~~~~~~~~~ 229 (355)
++..+.....+... .+ ...++.+++++++.++ +++|++++++|..++.+|+++.++
T Consensus 90 ~~~~l~d~~~~~~~~~y~~~~~~~~~~~~~~l~~~~~~~l~-g~~v~~~~agH~~Gs~~~~i~~~~-------------- 154 (431)
T 3iek_A 90 MEIVLEDALKVMDEPFFGPEDVEEALGHLRPLEYGEWLRLG-ALSLAFGQAGHLPGSAFVVAQGEG-------------- 154 (431)
T ss_dssp HHHHHHHHHHHCSSCSSCHHHHHHHHHTEEECCTTCCEEET-TEEEEEEECCSSTTCEEEEEEETT--------------
T ss_pred HHHHHHHHHhhcccCCCCHHHHHHHHhccEEcCCCCeEEeC-CEEEEEEeCCCCcCceEEEEEECC--------------
Confidence 88765543322210 00 0257789999999995 999999999999999999998643
Q ss_pred HHHHHhcCceecceeeCCeEEEEcCCCCCccCC-ccccccCCCCEEEEecccCCCcccHHHHhhcCCCcHHHHHHHHHHc
Q 018507 230 IEKLKKSGVEITDIILSPEVAFTGDTTSEFMLN-PRNADALRAKILITEATFLDDEMSIEHAQQHGHTHLSEIIENAKWI 308 (355)
Q Consensus 230 ~~~Lk~~G~~i~~~~~~~~i~y~gDt~~~~~~~-~~~~~~~~~d~Li~e~t~~~~~~~~~~a~~~~H~~~~~a~~~~~~~ 308 (355)
.+++|+||+....... .......++|+||+|+||.+...... +...++..+.+++.
T Consensus 155 -----------------~~ilfsGD~~~~~~~~l~~~~~~~~~D~LI~EsTy~~~~h~~~------~~~~~~l~~~i~~~ 211 (431)
T 3iek_A 155 -----------------RTLVYSGDLGNREKDVLPDPSLPPLADLVLAEGTYGDRPHRPY------RETVREFLEILEKT 211 (431)
T ss_dssp -----------------EEEEECCCCCCTTSSSSCCCCBCCCCSEEEEECTTTTCCCCCH------HHHHHHHHHHHHHH
T ss_pred -----------------EEEEEeCCCCCCCCcccCCccccCCccEEEEEcccCCcCCCCh------HHHHHHHHHHHHHH
Confidence 2799999998632211 12235568999999999987541100 01122233333321
Q ss_pred --CCCeEEEEecCCCCChhHHHHHHHHhcccc
Q 018507 309 --RNKAVLLTHFSSRYHIEDIRQAVLKLQSKV 338 (355)
Q Consensus 309 --~~k~~vltH~s~~~~~~~l~~~~~~~~~~~ 338 (355)
+..++++..|+-.. .+++...++++.+++
T Consensus 212 ~~~gg~vlIp~fa~gR-~qell~~l~~~~~~~ 242 (431)
T 3iek_A 212 LSQGGKVLIPTFAVER-AQEILYVLYTHGHRL 242 (431)
T ss_dssp HHTTCEEEEECCTTTH-HHHHHHHHHHHGGGS
T ss_pred HHcCCeEEEEeccchH-HHHHHHHHHHHHHhc
Confidence 23577777777322 346666666665443
No 14
>2wyl_A L-ascorbate-6-phosphate lactonase ULAG; hydrolase; 2.59A {Escherichia coli} PDB: 2wym_A*
Probab=99.83 E-value=9.1e-19 Score=168.18 Aligned_cols=187 Identities=13% Similarity=0.114 Sum_probs=130.2
Q ss_pred ccCEEEeccCCccccC--ChHHHHHHhCcCCCCCCEEecChhhHHHHHHHHHHHHhcCCCcCceeEEEcCCCCeeeecCC
Q 018507 115 QQNFVFITHGHLDHIG--GLPMYVASRGLYNLKPPTIFVPPSIKEDVEKLFEIHRSLGNVELNLDLVALDVGETYEMRND 192 (355)
Q Consensus 115 ~id~I~lTH~H~DHi~--GL~~l~~~~~~~~~~~~~Iy~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~g~~~~i~~g 192 (355)
+||+|||||.|+||++ ++..+... ..+.++||++..+.+.+++. .+ ...+++.++.|+.+.++ +
T Consensus 109 ~id~VliTH~H~DHig~~~l~~l~~~----~~~~~~v~~p~~~~~~l~~~-----g~----~~~~~~~l~~g~~~~~g-~ 174 (360)
T 2wyl_A 109 QIDAVLATHDHNDHIDVNVAAAVMQN----CADDVPFIGPKTCVDLWIGW-----GV----PKERCIVVKPGDVVKVK-D 174 (360)
T ss_dssp CCSEEECSBSCTTTCCHHHHHHHHHH----SCTTCCEEECHHHHHHHHHH-----TC----CGGGEEECCTTCEEEET-T
T ss_pred CCCEEEECCCchhcCCHHHHHHHHhc----CCCCCEEEEcHHHHHHHHHc-----CC----ChheEEEcCCCCEEEEC-C
Confidence 5899999999999994 23333321 11257799999888776542 01 12367889999999996 9
Q ss_pred eEEEEEEcCCC---------------------CCCeEEEEEEcchhhhhhhcccchHHHHHHHhcCceecceeeCCeEEE
Q 018507 193 IVVRPFKTHHV---------------------IPSQGYVIYLLRKKLKKQYIHLKGKQIEKLKKSGVEITDIILSPEVAF 251 (355)
Q Consensus 193 ~~v~~~~~~H~---------------------~~~~g~~i~~~~~~l~~~~~~~~~~~~~~Lk~~G~~i~~~~~~~~i~y 251 (355)
++|+++++.|. ..++||+|+.++ .+++|
T Consensus 175 ~~v~~~~~~H~~~~~~~~~~~h~~g~~~~~~~~~~~g~~i~~~g-------------------------------~~i~~ 223 (360)
T 2wyl_A 175 IEIHALDAFDRTALITLPADQKAAGVLPDGMDDRAVNYLFKTPG-------------------------------GSLYH 223 (360)
T ss_dssp EEEEEEECCCC------------------CCTTTBEEEEEEETT-------------------------------EEEEE
T ss_pred EEEEEEeccCcccccccccccccccccccccCcccEEEEEEECC-------------------------------cEEEE
Confidence 99999999885 237899997553 27999
Q ss_pred EcCCCCCccCCccccccCCCCEEEEecccCCCcccHHHHhhcCCCcHHHHHHHHHHcCCCeEEEEecCCCC----ChhHH
Q 018507 252 TGDTTSEFMLNPRNADALRAKILITEATFLDDEMSIEHAQQHGHTHLSEIIENAKWIRNKAVLLTHFSSRY----HIEDI 327 (355)
Q Consensus 252 ~gDt~~~~~~~~~~~~~~~~d~Li~e~t~~~~~~~~~~a~~~~H~~~~~a~~~~~~~~~k~~vltH~s~~~----~~~~l 327 (355)
+||+........ .....++|++++.+.. ... ....||+.++|+++++++++++++++|++... +.+++
T Consensus 224 sGDt~~~~~~~~-i~~~~~~Dv~il~~g~--~~~-----~~~~h~~~~ea~~~~~~l~~k~vi~~H~~~~~~~~~~~~e~ 295 (360)
T 2wyl_A 224 SGDSHYSNYYAK-HGNEHQIDVALGSYGE--NPR-----GITDKMTSADMLRMGEALNAKVVIPFHHDIWSNFQADPQEI 295 (360)
T ss_dssp CTTCCCCTTHHH-HHHHSCCCEEEEEBCC--CCT-----TCCCSBCHHHHHHHHHHHTCSEEEEESTTTBGGGCCCTHHH
T ss_pred eCCCCcCHHHHH-HhhCCCCCEEEecCCC--Ccc-----cccCCCCHHHHHHHHHHhCCCEEEEEeeccccccCCCHHHH
Confidence 999987432111 1111368999997642 110 13579999999999999999999999999853 34556
Q ss_pred HHHHHHhcc--cccCceeecccccccccC
Q 018507 328 RQAVLKLQS--KVSAKVVPLTEGFKSVYT 354 (355)
Q Consensus 328 ~~~~~~~~~--~~~~~v~~a~dGl~~~~~ 354 (355)
.+.+++... .+...+.++.+|.++.+.
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~Ge~~~l~ 324 (360)
T 2wyl_A 296 RVLWEMKKDRLKYGFKPFIWQVGGKFTWP 324 (360)
T ss_dssp HHHHHHHTTTTTCCCEECBCCTTCEEEET
T ss_pred HHHHHhhhhhhcCCcceEEccCCcEEEec
Confidence 665554322 234567778888777653
No 15
>3bv6_A Metal-dependent hydrolase; metallo protein, beta-lactamase like fold, MCSG, structural PSI-2, protein structure initiative; 1.80A {Vibrio cholerae o1 biovar eltor}
Probab=99.82 E-value=7e-19 Score=170.14 Aligned_cols=189 Identities=14% Similarity=0.121 Sum_probs=130.8
Q ss_pred ccCEEEeccCCccccCChHHHHHHhCcCCCCCCEEecChhhHHHHHHHHHHHHhcCCCcCceeEEEcCCCCeeeecCCeE
Q 018507 115 QQNFVFITHGHLDHIGGLPMYVASRGLYNLKPPTIFVPPSIKEDVEKLFEIHRSLGNVELNLDLVALDVGETYEMRNDIV 194 (355)
Q Consensus 115 ~id~I~lTH~H~DHi~GL~~l~~~~~~~~~~~~~Iy~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~g~~~~i~~g~~ 194 (355)
+||+|||||.|+||+ |++.+..... ...+.++||++..+.+.+++. .+ ...+++.++.|+.+.++ +++
T Consensus 133 ~iD~IliTH~H~DHi-g~~~l~~l~~-~~~~~~~v~~~~~~~~~l~~~-----g~----~~~~~~~l~~g~~~~~g-~~~ 200 (379)
T 3bv6_A 133 EIDAVLASHDHADHI-DVNVAAAVLQ-NCGEHVKFIGPQACVDLWLGW-----GV----PQERCIVAKVGDVLEIG-DVK 200 (379)
T ss_dssp CCSEEECSBCSGGGC-CHHHHHHHHH-HSCTTCEEEECHHHHHHHHHH-----TC----CGGGEEECCTTCEEEET-TEE
T ss_pred CCCEEEECCCCcccC-ChHHHHHHHh-cCCCCcEEEecHHHHHHHHHc-----CC----ChhhEEEeCCCCEEEEC-CEE
Confidence 589999999999999 5443322110 011368899999888776542 01 12367889999999996 999
Q ss_pred EEEEEcCCCC----------------------CCeEEEEEEcchhhhhhhcccchHHHHHHHhcCceecceeeCCeEEEE
Q 018507 195 VRPFKTHHVI----------------------PSQGYVIYLLRKKLKKQYIHLKGKQIEKLKKSGVEITDIILSPEVAFT 252 (355)
Q Consensus 195 v~~~~~~H~~----------------------~~~g~~i~~~~~~l~~~~~~~~~~~~~~Lk~~G~~i~~~~~~~~i~y~ 252 (355)
|+++++.|.. .++||+|+.++ .+++|+
T Consensus 201 v~~~~~~H~~~~~~~p~~h~~~~G~~~~~~~~~~~g~~i~~~g-------------------------------~~i~~s 249 (379)
T 3bv6_A 201 IRVLDSFDRTALVTLPKGVSSYDKAILDGMDERAVNYLIETSG-------------------------------GSVYHS 249 (379)
T ss_dssp EEEEECCCHHHHTCCCTTSCSSCGGGGGCHHHHBEEEEEEETT-------------------------------EEEEEC
T ss_pred EEEEecccccccccccccccccccccccccCCceEEEEEEeCC-------------------------------eEEEEe
Confidence 9999998841 27899997553 279999
Q ss_pred cCCCCCccCCccccccCCCCEEEEecccCCCcccHHHHhhcCCCcHHHHHHHHHHcCCCeEEEEecCCCC----ChhHHH
Q 018507 253 GDTTSEFMLNPRNADALRAKILITEATFLDDEMSIEHAQQHGHTHLSEIIENAKWIRNKAVLLTHFSSRY----HIEDIR 328 (355)
Q Consensus 253 gDt~~~~~~~~~~~~~~~~d~Li~e~t~~~~~~~~~~a~~~~H~~~~~a~~~~~~~~~k~~vltH~s~~~----~~~~l~ 328 (355)
||+........ .....++|++++.... ... ....||+.++|+++++++++++++++|++... +.+++.
T Consensus 250 GDt~~~~~~~~-i~~~~~~Dv~il~~g~--~~~-----~~~~h~~~~ea~~~~~~l~~k~vi~~H~~~~~~~~~~~~e~~ 321 (379)
T 3bv6_A 250 GDSHYSNYYAK-HGNDYQIDVALLSYGE--NPR-----GVTDKMTSSDVLRAAESLDCQVVVPFHHDIWANFQNDPREIE 321 (379)
T ss_dssp TTCCCCTTHHH-HHHHSCCSEEEEEBCC--CCT-----TCCCSBCHHHHHHHHHHHTCSEEEEESTTSBGGGCCCTHHHH
T ss_pred CCCCccHHHHH-HhhcCCCCEEEecCCC--Ccc-----cccccCCHHHHHHHHHHcCCCEEEEEeecccccccCCHHHHH
Confidence 99987322111 1111278999997643 110 13579999999999999999999999999753 335555
Q ss_pred HHHHHhcc--cccCceeecccccccccC
Q 018507 329 QAVLKLQS--KVSAKVVPLTEGFKSVYT 354 (355)
Q Consensus 329 ~~~~~~~~--~~~~~v~~a~dGl~~~~~ 354 (355)
+.+++... .+...+.++.+|.++.+.
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~G~~~~l~ 349 (379)
T 3bv6_A 322 VLWNMKKDRLQYQFAPFFWQVGGKYTYP 349 (379)
T ss_dssp HHHHHHTTTTTCCCEECBCCTTCEEEET
T ss_pred HHHHhhhhhhcCCCceEEccCCcEEEec
Confidence 55543322 134567788888887763
No 16
>3zq4_A Ribonuclease J 1, RNAse J1; hydrolase, RNA maturation; 3.00A {Bacillus subtilis}
Probab=99.80 E-value=6.1e-19 Score=178.29 Aligned_cols=192 Identities=20% Similarity=0.235 Sum_probs=132.4
Q ss_pred ceEEEEeCCcEEEEecCCCCcc-------------------ccccCEEEeccCCccccCChHHHHHHhCcCCCCCCEEec
Q 018507 91 HETCVIIPELKCAFDIGRCPTR-------------------AIQQNFVFITHGHLDHIGGLPMYVASRGLYNLKPPTIFV 151 (355)
Q Consensus 91 ~~s~~~i~~~~iLID~G~~~~~-------------------~~~id~I~lTH~H~DHi~GL~~l~~~~~~~~~~~~~Iy~ 151 (355)
|...+..++..+|||||..+.. ..+|++||+||+|.||++|++.++..+ .++||+
T Consensus 23 n~~li~~~~~~iLID~G~~~~~~~~~g~d~iip~~~~l~~~~~~Id~I~lTH~H~DHiggl~~l~~~~------~~pIy~ 96 (555)
T 3zq4_A 23 NTYAVQFQDEIVLIDAGIKFPEDELLGIDYVIPDYTYLVKNEDKIKGLFITHGHEDHIGGIPYLLRQV------NIPVYG 96 (555)
T ss_dssp CEEEEEETTEEEEEEECCBCCCTTSTTCSEEEECCHHHHTTTTTEEEEEESCCCHHHHTTHHHHHTTC------CCCEEE
T ss_pred EEEEEEECCeEEEEeCCCCCCccccccccccccCHHHHhcCccCCCEEEECCCchhhhCCHHHHHHhc------CceEEE
Confidence 4333444678999999965321 126899999999999999999987421 356999
Q ss_pred ChhhHHHHHHHHHHHHhcCCCcCceeEEEcCCCCeeeecCCeEEEEEEcCC-CCCCeEEEEEEcchhhhhhhcccchHHH
Q 018507 152 PPSIKEDVEKLFEIHRSLGNVELNLDLVALDVGETYEMRNDIVVRPFKTHH-VIPSQGYVIYLLRKKLKKQYIHLKGKQI 230 (355)
Q Consensus 152 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~g~~~~i~~g~~v~~~~~~H-~~~~~g~~i~~~~~~l~~~~~~~~~~~~ 230 (355)
++.+.+.++..+...... ....++.+.+++++.++ +++|++++++| .+++++|+++.++
T Consensus 97 t~~t~~ll~~~l~~~~~~----~~~~~~~v~~g~~~~ig-~~~v~~~~~~H~~pgs~~~~i~~~~--------------- 156 (555)
T 3zq4_A 97 GKLAIGLLRNKLEEHGLL----RQTKLNIIGEDDIVKFR-KTAVSFFRTTHSIPDSYGIVVKTPP--------------- 156 (555)
T ss_dssp CHHHHHHHHHHHHHHSTT----TTCCEEECCTTCCEEET-TEEEEEEEEBCSSSSEEEEEEEETT---------------
T ss_pred CHHHHHHHHHHHHHcCcc----CCCceEEeCCCCEEEEC-CEEEEEEeCCCCCcCcEEEEEEECC---------------
Confidence 999999988876543221 13467889999999996 99999999988 5689999998653
Q ss_pred HHHHhcCceecceeeCCeEEEEcCCCCCccCC---cccc-cc----CCCCEEEEecccCCCcccHHHHhhcCCCcHHHHH
Q 018507 231 EKLKKSGVEITDIILSPEVAFTGDTTSEFMLN---PRNA-DA----LRAKILITEATFLDDEMSIEHAQQHGHTHLSEII 302 (355)
Q Consensus 231 ~~Lk~~G~~i~~~~~~~~i~y~gDt~~~~~~~---~~~~-~~----~~~d~Li~e~t~~~~~~~~~~a~~~~H~~~~~a~ 302 (355)
.+++|+||+..+..+. .... .. +++|+||+|+||.+... ...+-.+..
T Consensus 157 ----------------~~il~tGD~~~~~~~~~g~~d~~~l~~l~~~~~d~Li~esT~~~~~~--------~~~se~~v~ 212 (555)
T 3zq4_A 157 ----------------GNIVHTGDFKFDFTPVGEPANLTKMAEIGKEGVLCLLSDSTNSENPE--------FTMSERRVG 212 (555)
T ss_dssp ----------------EEEEECCSCBCCSSCSSSCCCHHHHHHHHHTCEEEEEEECTTTTCCS--------CCCCHHHHH
T ss_pred ----------------cEEEEeCCCCCCCCcCcCccCHHHHHHhcccCCcEEEecCcccCCCC--------CCCCHHHHH
Confidence 2799999998643221 0111 11 47999999999986431 122222332
Q ss_pred ----HHHHHcCCCeEEEEecCCCCCh-hHHHHHHHH
Q 018507 303 ----ENAKWIRNKAVLLTHFSSRYHI-EDIRQAVLK 333 (355)
Q Consensus 303 ----~~~~~~~~k~~vltH~s~~~~~-~~l~~~~~~ 333 (355)
+++++. ..++++++|++.... +++...+++
T Consensus 213 ~~i~~~~~~~-~grvii~~fasnv~R~q~il~~a~~ 247 (555)
T 3zq4_A 213 ESIHDIFRKV-DGRIIFATFASNIHRLQQVIEAAVQ 247 (555)
T ss_dssp HHHHHHHHHC-CSCEEEECCTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHhC-CCEEEEEEChhHHHHHHHHHHHHHH
Confidence 233333 468999999976543 344444443
No 17
>3af5_A Putative uncharacterized protein PH1404; archaeal CPSF, beta-CAsp family, KH domain, ribonuclease, ME beta-lactamase superfamily, archaea; 2.60A {Pyrococcus horikoshii} PDB: 3af6_A*
Probab=99.79 E-value=4e-18 Score=175.59 Aligned_cols=229 Identities=20% Similarity=0.200 Sum_probs=146.6
Q ss_pred CeEEEEEeecC--ceEEEEe--CCcEEEEecCCCCcc-------------------c--cccCEEEeccCCccccCChHH
Q 018507 80 GYTIEGVSIGG--HETCVII--PELKCAFDIGRCPTR-------------------A--IQQNFVFITHGHLDHIGGLPM 134 (355)
Q Consensus 80 ~~~i~~~~~g~--~~s~~~i--~~~~iLID~G~~~~~-------------------~--~~id~I~lTH~H~DHi~GL~~ 134 (355)
.+.|...+.++ ..+|+++ ++..+|||||.+... . .+||+|||||.|.||++|++.
T Consensus 188 ~m~i~~LG~~~~vg~s~~LI~~~~~~ILID~G~~~~~~~~g~~~l~~l~~~~~g~~~~~~~Id~VllTH~H~DHiGglp~ 267 (651)
T 3af5_A 188 WIRITGLGGFREVGRSALLVQTDESFVLVDFGVNVAMLNDPYKAFPHFDAPEFQYVLREGLLDAIIITHAHLDHCGMLPY 267 (651)
T ss_dssp CEEEEEEECSSSSSCCEEEEEESSCEEEECCCCCGGGTTCHHHHSCCTTCHHHHHHHHTTCCCEEECSCSSHHHHTTHHH
T ss_pred ceEEEEEecCCCCCCcEEEEEECCcEEEEeCCCChhccccchhhcccccchhhccCcccCCCCEEEECCCChHhhcCHHH
Confidence 35666666553 3566666 578999999976431 1 348999999999999999999
Q ss_pred HHHHhCcCCCCCCEEecChhhHHHHHHHHHHHHhc---C--CCcC--------ceeEEEcCCCCeeeecCCeEEEEEEcC
Q 018507 135 YVASRGLYNLKPPTIFVPPSIKEDVEKLFEIHRSL---G--NVEL--------NLDLVALDVGETYEMRNDIVVRPFKTH 201 (355)
Q Consensus 135 l~~~~~~~~~~~~~Iy~~~~~~~~l~~~~~~~~~~---~--~~~~--------~~~~~~l~~g~~~~i~~g~~v~~~~~~ 201 (355)
+.....+ ..+||+++.+.+.++..+.....+ . ...+ ...++.+.+++.+.+.++++|++++++
T Consensus 268 L~~~~~~----~~pIy~t~~t~~ll~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~l~ggi~v~~~~~g 343 (651)
T 3af5_A 268 LFRYNLF----DGPIYTTPPTRDLMVLLQKDFIEIQQSNGQDPLYRPRDIKEVIKHTITLDYGEVRDISPDIRLTLHNAG 343 (651)
T ss_dssp HHHTTCC----CSCEEECHHHHHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHTEEECCTTCCEEEETTEEEEEEECS
T ss_pred HHhcCCC----CceEEEcHHHHHHHHHHHHHHHHHhhhcccCCCCCHHHHHHhhhcEEEeCCCCEEEecCCEEEEEecCC
Confidence 9752101 356999999998877654322110 0 0000 014678889999999339999999999
Q ss_pred CCCCCeEEEEEEcchhhhhhhcccchHHHHHHHhcCceecceeeCCeEEEEcCCCCCcc--CCccccccCCCCEEEEecc
Q 018507 202 HVIPSQGYVIYLLRKKLKKQYIHLKGKQIEKLKKSGVEITDIILSPEVAFTGDTTSEFM--LNPRNADALRAKILITEAT 279 (355)
Q Consensus 202 H~~~~~g~~i~~~~~~l~~~~~~~~~~~~~~Lk~~G~~i~~~~~~~~i~y~gDt~~~~~--~~~~~~~~~~~d~Li~e~t 279 (355)
|..++++|.++.++.. .+++|+||+..+.. .........++|+||+|||
T Consensus 344 H~~Gs~~~~i~~~~~~-----------------------------~~ilftGD~~~~~~~ll~~~~~~~~~~DvLI~EsT 394 (651)
T 3af5_A 344 HILGSAIVHLHIGNGL-----------------------------HNIAITGDFKFIPTRLLEPANAKFPRLETLVMEST 394 (651)
T ss_dssp SSTTCEEEEEEETTTT-----------------------------TCEEECCSCCCSCCSSCCCCCCBCSSCSEEEEECT
T ss_pred CCcCcEEEEEEECCCc-----------------------------eEEEEeCCCCCCcccccccccccCCCCCEEEECCC
Confidence 9999999999865310 16999999987432 2111123568999999999
Q ss_pred cCCCcccHHHHhhcCCCcH----HHHHHHHHHc--CCCeEEEEecCCCCChhHHHHHHHHhcccccCceeecccccc
Q 018507 280 FLDDEMSIEHAQQHGHTHL----SEIIENAKWI--RNKAVLLTHFSSRYHIEDIRQAVLKLQSKVSAKVVPLTEGFK 350 (355)
Q Consensus 280 ~~~~~~~~~~a~~~~H~~~----~~a~~~~~~~--~~k~~vltH~s~~~~~~~l~~~~~~~~~~~~~~v~~a~dGl~ 350 (355)
|.+.. ..|.+- ++..+.+++. ...++++..|+ -...+++...+.++.+.-.-.+.++.||+.
T Consensus 395 ~~~~~--------~~h~s~~~~~~~l~~~i~~~l~~~g~vlIp~fa-vgR~qell~~l~~~~~~~~l~~~I~~dg~a 462 (651)
T 3af5_A 395 YGGAN--------DIQMPREEAEKRLIEVIHNTIKRGGKVLIPAMA-VGRAQEVMMVLEEYARIGGIEVPIYLDGMI 462 (651)
T ss_dssp TCSTT--------CCCCCHHHHHHHHHHHHHHHHHTTCEEEEECCT-TTHHHHHHHHHHHHHTTTCCCSCEEEESSH
T ss_pred CCCCC--------CCCCCHHHHHHHHHHHHHHHHhCCCEEEEeccC-ccHHHHHHHHHHHhhhhcCCCCcEEEechH
Confidence 98643 112222 2233344332 34578888887 223356666666554321111455678864
No 18
>3zdk_A 5' exonuclease apollo; hydrolase; HET: TLA; 2.16A {Homo sapiens}
Probab=99.78 E-value=1.1e-18 Score=165.76 Aligned_cols=182 Identities=19% Similarity=0.209 Sum_probs=126.1
Q ss_pred EEeCCcEEEEecCCCCccccccCEEEeccCCccccCChHHHHHHhCcCCCCCCEEecChhhHHHHHHHHHHHHhcCCCcC
Q 018507 95 VIIPELKCAFDIGRCPTRAIQQNFVFITHGHLDHIGGLPMYVASRGLYNLKPPTIFVPPSIKEDVEKLFEIHRSLGNVEL 174 (355)
Q Consensus 95 ~~i~~~~iLID~G~~~~~~~~id~I~lTH~H~DHi~GL~~l~~~~~~~~~~~~~Iy~~~~~~~~l~~~~~~~~~~~~~~~ 174 (355)
.++.+..+.||..... ..-+|++|||||+|.||++|++.++ ..+||+++.+.+.++..+...
T Consensus 5 ~~i~g~~i~vD~f~~~-~~~~i~ai~lTH~H~DHiggl~~l~---------~~pVy~s~~t~~ll~~~l~~~-------- 66 (336)
T 3zdk_A 5 VLIPHTPIAVDFWSLR-RAGTARLFFLSHMHSDHTVGLSSTW---------ARPLYCSPITAHLLHRHLQVS-------- 66 (336)
T ss_dssp EECTTSSEEESCCCHH-HHCSSCEEECCCCCGGGSTTCSTTC---------CSCEEECHHHHHHHHHHHCCC--------
T ss_pred eEeCCCCEeecCCccc-CCCCCCEEEECCChHHHHCchHHHc---------CCCEEecHHHHHHHHHhhhhc--------
Confidence 4456678999976531 2237999999999999999998752 256999999999998765211
Q ss_pred ceeEEEcCCCCeeee-------cCCeEEEEEEcCCCCCCeEEEEEEcchhhhhhhcccchHHHHHHHhcCceecceeeCC
Q 018507 175 NLDLVALDVGETYEM-------RNDIVVRPFKTHHVIPSQGYVIYLLRKKLKKQYIHLKGKQIEKLKKSGVEITDIILSP 247 (355)
Q Consensus 175 ~~~~~~l~~g~~~~i-------~~g~~v~~~~~~H~~~~~g~~i~~~~~~l~~~~~~~~~~~~~~Lk~~G~~i~~~~~~~ 247 (355)
...++.++.++.+.+ + +++|++++++|.++++||+|+.++ .
T Consensus 67 ~~~~~~~~~~~~~~i~~~~~~~g-~~~v~~~~~~H~~gs~~~~i~~~~-------------------------------~ 114 (336)
T 3zdk_A 67 KQWIQALEVGESHVLPLDEIGQE-TMTVTLLDANHCPGSVMFLFEGYF-------------------------------G 114 (336)
T ss_dssp TTTEEECCTTSEEEEESSSSSSC-EEEEEEEECSSSTTCEEEEEEETT-------------------------------E
T ss_pred ccceEecCCCCeEEecCcccccC-CEEEEEEECCCCcceEEEEEEeCC-------------------------------c
Confidence 123556666666654 4 899999999998899999998653 2
Q ss_pred eEEEEcCCCCCccCCcccc--ccCCCCEEEEecccCCCcccHHHHhhcCCCc----HHHHHHHHHHcCCCeEEEEecCCC
Q 018507 248 EVAFTGDTTSEFMLNPRNA--DALRAKILITEATFLDDEMSIEHAQQHGHTH----LSEIIENAKWIRNKAVLLTHFSSR 321 (355)
Q Consensus 248 ~i~y~gDt~~~~~~~~~~~--~~~~~d~Li~e~t~~~~~~~~~~a~~~~H~~----~~~a~~~~~~~~~k~~vltH~s~~ 321 (355)
+++|+||++.+........ ...++|+||+|+||.+... .+.+ .+++.+++++....++++++|+-
T Consensus 115 ~i~~tGD~~~~~~~~~~~~l~~~~~vD~Li~DsT~~~~~~--------~~pse~~v~~~l~~~i~~~~~g~vii~~f~v- 185 (336)
T 3zdk_A 115 TILYTGDFRYTPSMLKEPALTLGKQIHTLYLDNTNCNPAL--------VLPSRQEAAHQIVQLIRKHPQHNIKIGLYSL- 185 (336)
T ss_dssp EEEECCSCCCCGGGGGCGGGSSCCCCSEEEECCTBCCTTC--------CCCCHHHHHHHHHHHHHTCTTSEEEEEECSS-
T ss_pred eEEEeCCCCCCcccccchhhhccCCccEEEEecCCCCCCC--------CCCCHHHHHHHHHHHHHhCCCCcEEEeecch-
Confidence 7999999987433221111 2568999999999987531 2222 33455566665556899999932
Q ss_pred CChhHHHHHHHHhc
Q 018507 322 YHIEDIRQAVLKLQ 335 (355)
Q Consensus 322 ~~~~~l~~~~~~~~ 335 (355)
...+++.+.++++.
T Consensus 186 gR~q~i~~~a~~~g 199 (336)
T 3zdk_A 186 GKESLLEQLALEFQ 199 (336)
T ss_dssp SCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcC
Confidence 23345555555543
No 19
>2i7x_A Protein CFT2; polyadenylation, metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination, double-strand break repair; 2.50A {Saccharomyces cerevisiae} SCOP: d.157.1.10
Probab=99.77 E-value=2.5e-18 Score=178.21 Aligned_cols=205 Identities=9% Similarity=0.113 Sum_probs=130.2
Q ss_pred CceEEEEe--CCcEEEEecCCCCcc-------------ccccCEEEeccCCccccCChHHHHHHhCcCCCCCCEEecChh
Q 018507 90 GHETCVII--PELKCAFDIGRCPTR-------------AIQQNFVFITHGHLDHIGGLPMYVASRGLYNLKPPTIFVPPS 154 (355)
Q Consensus 90 ~~~s~~~i--~~~~iLID~G~~~~~-------------~~~id~I~lTH~H~DHi~GL~~l~~~~~~~~~~~~~Iy~~~~ 154 (355)
...+|+++ ++..+|||||.+... ..+||+|||||+|.||++|++.++..+........+||+++.
T Consensus 13 v~~n~~LIe~~~~~ILID~G~~~~~~~~~~~l~~L~~~~~~IdaVlLTH~H~DHiGgLp~L~~~~~~g~~~~~pIY~t~~ 92 (717)
T 2i7x_A 13 GTTVGSVVRFDNVTLLIDPGWNPSKVSYEQCIKYWEKVIPEIDVIILSQPTIECLGAHSLLYYNFTSHFISRIQVYATLP 92 (717)
T ss_dssp SSCCCEEEEETTEEEEECCCCCTTTSCHHHHHHHHHTTGGGCCEEECCCSSHHHHTTHHHHHHHSHHHHHHTCEEEEEHH
T ss_pred CCCCEEEEEECCeEEEEeCCCCcccchhhhHHHHHHhcCCCCCEEEECCCChHHHCCHHHHHHhhhhcccCCceEEecch
Confidence 34566666 567899999977521 116899999999999999999997532100001367999999
Q ss_pred hHHHHHHHHHHHHhcCCCcCc---------------eeEEEcCCCCeeee---cCCeEEEEEEcCCCCCCeEEEEEEcch
Q 018507 155 IKEDVEKLFEIHRSLGNVELN---------------LDLVALDVGETYEM---RNDIVVRPFKTHHVIPSQGYVIYLLRK 216 (355)
Q Consensus 155 ~~~~l~~~~~~~~~~~~~~~~---------------~~~~~l~~g~~~~i---~~g~~v~~~~~~H~~~~~g~~i~~~~~ 216 (355)
+.+.++..+............ ..++.+.+++.+.+ .++++|++++++|.+++++|+|+.++
T Consensus 93 t~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~l~~ge~i~l~~~~ggi~V~~~~aGHs~Gs~~~~I~~~~- 171 (717)
T 2i7x_A 93 VINLGRVSTIDSYASAGVIGPYDTNKLDLEDIEISFDHIVPLKYSQLVDLRSRYDGLTLLAYNAGVCPGGSIWCISTYS- 171 (717)
T ss_dssp HHHHHHHHHHHHHHHTTSSSSBTTCCSCHHHHHHHHHTSEEECTTCCEEETTTTTTEEEEEEECSSSTTCEEEEEECSS-
T ss_pred hHHHHHHHHHHHHHhhccccccccccccHHHHHhhhhceEEecCCCEEEEeecCCCEEEEEECCCCCCCcEEEEEEeCC-
Confidence 988776554322111110000 14677888999998 23999999999999999999997542
Q ss_pred hhhhhhcccchHHHHHHHhcCceecceeeCCeEEEEcCCCCCc--cCCc---------cccccCCCCEEEEecccCCCcc
Q 018507 217 KLKKQYIHLKGKQIEKLKKSGVEITDIILSPEVAFTGDTTSEF--MLNP---------RNADALRAKILITEATFLDDEM 285 (355)
Q Consensus 217 ~l~~~~~~~~~~~~~~Lk~~G~~i~~~~~~~~i~y~gDt~~~~--~~~~---------~~~~~~~~d~Li~e~t~~~~~~ 285 (355)
.+|+|+||+.... .... ..+.+.++|+||+|+||.....
T Consensus 172 ------------------------------~~IvytGD~~~~~~~~l~~~~~L~~~g~~l~~l~~~D~LI~EsTy~~~~h 221 (717)
T 2i7x_A 172 ------------------------------EKLVYAKRWNHTRDNILNAASILDATGKPLSTLMRPSAIITTLDRFGSSQ 221 (717)
T ss_dssp ------------------------------CEEEECSSCCSSCCSSCCCCTTBCTTSCBCSTTSSCSEEEECCSCCCCSS
T ss_pred ------------------------------CEEEEECCCCCCcccccCccccccccchhHHhccCCcEEEEcCCCCCCCC
Confidence 2799999997522 1110 1123458999999999976531
Q ss_pred cHHHHhhcCCCcHHHHHHHHHH---cCCCeEEEEecCCCCChhHHHHHHHHh
Q 018507 286 SIEHAQQHGHTHLSEIIENAKW---IRNKAVLLTHFSSRYHIEDIRQAVLKL 334 (355)
Q Consensus 286 ~~~~a~~~~H~~~~~a~~~~~~---~~~k~~vltH~s~~~~~~~l~~~~~~~ 334 (355)
.. +...++..+.+.+ .+.+.++.++.+.+ ..++...+.++
T Consensus 222 ~~-------~~~~~~l~~~i~~~l~~~G~VlIp~fa~gR--~qell~~l~~~ 264 (717)
T 2i7x_A 222 PF-------KKRSKIFKDTLKKGLSSDGSVIIPVDMSGK--FLDLFTQVHEL 264 (717)
T ss_dssp CH-------HHHHHHHHHHHHHHTSTTCEEEEEECTTTH--HHHHHHHHHHH
T ss_pred CC-------HHHHHHHHHHHHHHHhCCCeEEEEeccchH--HHHHHHHHHHh
Confidence 10 1123333444433 24445555565533 34555555443
No 20
>2i7t_A Cleavage and polyadenylation specificity factor 73 kDa subunit; metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination; 2.10A {Homo sapiens} SCOP: d.157.1.10 PDB: 2i7v_A
Probab=99.77 E-value=4.5e-17 Score=161.26 Aligned_cols=168 Identities=23% Similarity=0.341 Sum_probs=116.1
Q ss_pred eEEEEEeecC--ceEEEEe--CCcEEEEecCCCCc----cc---------cccCEEEeccCCccccCChHHHHHHhCcCC
Q 018507 81 YTIEGVSIGG--HETCVII--PELKCAFDIGRCPT----RA---------IQQNFVFITHGHLDHIGGLPMYVASRGLYN 143 (355)
Q Consensus 81 ~~i~~~~~g~--~~s~~~i--~~~~iLID~G~~~~----~~---------~~id~I~lTH~H~DHi~GL~~l~~~~~~~~ 143 (355)
+.|..++.++ ..+|+++ ++..+|||||.+.. .. .+||+|||||.|.||++|++.+.....+
T Consensus 12 m~i~~LG~~~~vg~s~~li~~~~~~iLID~G~~~~~~~~~~~~~l~~~~~~~Id~VllTH~H~DH~ggl~~l~~~~~~-- 89 (459)
T 2i7t_A 12 LLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLIDPAEIDLLLISHFHLDHCGALPWFLQKTSF-- 89 (459)
T ss_dssp EEEEEEESSSSSSSCEEEEEETTEEEEECCCCCTTSCGGGGSCCGGGSCGGGCCEEECCCSSHHHHTTHHHHHHHSSC--
T ss_pred EEEEEEecCCCCCCCEEEEEECCeEEEEeCCCCcCcccccccCcccccCcccCcEEEECCCChhhhhhhHHHHHhcCC--
Confidence 4455555543 2567777 57799999997521 11 1689999999999999999998764332
Q ss_pred CCCCEEecChhhHHHHHHHHHHHHhcCCC-------------cCceeEEEcCCCCeeeecCCeEEEEEEcCCCCCCeEEE
Q 018507 144 LKPPTIFVPPSIKEDVEKLFEIHRSLGNV-------------ELNLDLVALDVGETYEMRNDIVVRPFKTHHVIPSQGYV 210 (355)
Q Consensus 144 ~~~~~Iy~~~~~~~~l~~~~~~~~~~~~~-------------~~~~~~~~l~~g~~~~i~~g~~v~~~~~~H~~~~~g~~ 210 (355)
+.+||+++.+.+.+...+.....+... ...-.++.++.++++.++ |+++++++.+|..++.+|+
T Consensus 90 --~~~iy~t~~t~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-gi~v~~~~~GH~~Gs~~~~ 166 (459)
T 2i7t_A 90 --KGRTFMTHATKAIYRWLLSDYVKVSNISADDMLYTETDLEESMDKIETINFHEVKEVA-GIKFWCYHAGHVLGAAMFM 166 (459)
T ss_dssp --CSEEEEEHHHHHHHHHHHHHHCC---------CCCHHHHHHHGGGEEEECTTCCEEET-TEEEEEEECCSSTTCEEEE
T ss_pred --CCCEEechHHHHHHHHHHHHHHHHhcccccccccCHHHHHHHHhccEEeCCCCEEEEC-CEEEEEEeCCCccCcEEEE
Confidence 256999999888776654322111000 001156788889999995 9999999999999999999
Q ss_pred EEEcchhhhhhhcccchHHHHHHHhcCceecceeeCCeEEEEcCCCCCccCCcccc--ccCCCCEEEEecccCCCc
Q 018507 211 IYLLRKKLKKQYIHLKGKQIEKLKKSGVEITDIILSPEVAFTGDTTSEFMLNPRNA--DALRAKILITEATFLDDE 284 (355)
Q Consensus 211 i~~~~~~l~~~~~~~~~~~~~~Lk~~G~~i~~~~~~~~i~y~gDt~~~~~~~~~~~--~~~~~d~Li~e~t~~~~~ 284 (355)
++.++ .+++|+||+........... ...++|+||+|+||.+..
T Consensus 167 i~~~~-------------------------------~~il~sGD~~~~~~~~~~~~~~~~~~~D~Li~Esty~~~~ 211 (459)
T 2i7t_A 167 IEIAG-------------------------------VKLLYTGDFSRQEDRHLMAAEIPNIKPDILIIESTYGTHI 211 (459)
T ss_dssp EEETT-------------------------------EEEEECCSCCCC-----CCCCCCSSCCSEEEEECTTTTCC
T ss_pred EEECC-------------------------------cEEEEeCCCCCCCCcccCCCCcCCCCCeEEEECCCCCCCC
Confidence 98653 27999999987332111111 124799999999998653
No 21
>2ycb_A Beta-CAsp RNAse, cleavage and polyadenylation specificity factor; hydrolase, KH, metallo-beta-lactamase; 3.10A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=99.77 E-value=1.2e-17 Score=171.54 Aligned_cols=227 Identities=18% Similarity=0.227 Sum_probs=144.0
Q ss_pred eEEEEEeecC--ceEEEEe--CCcEEEEecCCCCcc----------------ccccCEEEeccCCccccCChHHHHHHhC
Q 018507 81 YTIEGVSIGG--HETCVII--PELKCAFDIGRCPTR----------------AIQQNFVFITHGHLDHIGGLPMYVASRG 140 (355)
Q Consensus 81 ~~i~~~~~g~--~~s~~~i--~~~~iLID~G~~~~~----------------~~~id~I~lTH~H~DHi~GL~~l~~~~~ 140 (355)
+.|...+.++ ..+|+++ ++..+|||||.+... ..+||+|||||+|.||++|++.+... .
T Consensus 180 m~i~~LG~~~evg~s~~lI~~~~~~ILID~G~~~~~~~~~~~~~~l~~l~~~~~~Id~VlLTH~H~DHiGglp~L~~~-~ 258 (636)
T 2ycb_A 180 ARLTAMGGFREVGRSCLYLQTPNSRVLLDCGVNVAGGDDKNSYPYLNVPEFTLDSLDAVIITHAHLDHSGFLPYLYHY-G 258 (636)
T ss_dssp CEEEEEESSSSSSCCEEEEECSSCEEEEEECCCCSSCCHHHHSCCTTSTTCCTTTCCEEECSSSSHHHHTTHHHHHHT-T
T ss_pred EEEEEEecCCCCCCCEEEEEECCeEEEEeCCCCcccccchhhccccccccCCcccCcEEEECCCChHHhcCHHHHHhc-C
Confidence 5566655543 4567766 567999999976432 11589999999999999999999752 1
Q ss_pred cCCCCCCEEecChhhHHHHHHHHHHHHhc----C-CCcC--------ceeEEEcCCCCeeeecCCeEEEEEEcCCCCCCe
Q 018507 141 LYNLKPPTIFVPPSIKEDVEKLFEIHRSL----G-NVEL--------NLDLVALDVGETYEMRNDIVVRPFKTHHVIPSQ 207 (355)
Q Consensus 141 ~~~~~~~~Iy~~~~~~~~l~~~~~~~~~~----~-~~~~--------~~~~~~l~~g~~~~i~~g~~v~~~~~~H~~~~~ 207 (355)
...+||+++.+.+.++..+.....+ . ...+ ...++.+.+++.+.+.+++++++++++|..+++
T Consensus 259 ----~~~~Iy~t~~t~~l~~~~l~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~g~~~~l~ggi~v~~~~~gH~~Gs~ 334 (636)
T 2ycb_A 259 ----YDGPVYCTAPTRDLMTLLQLDHIDIAHREDEPLPFNVKHVKKSVKHTITLDYGEVTDIAPDIRLTLHNAGHILGSA 334 (636)
T ss_dssp ----CCSCEEECHHHHHHHHHHHHHHHHHHHHHTCCCSCCHHHHHHHHHTEEECCTTCCEEEETTEEEEEEECCSSTTCE
T ss_pred ----CCCeEEEcchHHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHhceEEeCCCCEEEecCCeEEEEeCCCCCCCcE
Confidence 2356999999998877654322110 0 0000 014678889999999339999999999999999
Q ss_pred EEEEEEcchhhhhhhcccchHHHHHHHhcCceecceeeCCeEEEEcCCCCCcc--CCccccccCCCCEEEEecccCCCcc
Q 018507 208 GYVIYLLRKKLKKQYIHLKGKQIEKLKKSGVEITDIILSPEVAFTGDTTSEFM--LNPRNADALRAKILITEATFLDDEM 285 (355)
Q Consensus 208 g~~i~~~~~~l~~~~~~~~~~~~~~Lk~~G~~i~~~~~~~~i~y~gDt~~~~~--~~~~~~~~~~~d~Li~e~t~~~~~~ 285 (355)
+|+++.++.. .+++|+||+..+.. .........++|+||+||||.+..
T Consensus 335 ~~~i~~~~~~-----------------------------~~ilftGD~~~~~~~ll~~~~~~~~~~D~LI~EsT~~~~~- 384 (636)
T 2ycb_A 335 MAHLHIGDGQ-----------------------------HNMVYTGDFKYEQSRLLEAAANRFPRIETLVMESTYGGHE- 384 (636)
T ss_dssp EEEEEETTTT-----------------------------TCEEECCSCCSSCCSSSCCCCCCCSCCSEEEEECTTCSGG-
T ss_pred EEEEEECCCe-----------------------------EEEEEECCCCCCcccccCCcccCCCCCeEEEECCCCCCCC-
Confidence 9999865310 16999999987432 211112346899999999997542
Q ss_pred cHHHHhhcCCCc----HHHHHHHHHH---cCCCeEEEEecCCCCChhHHHHHHHHhcc-cccCceeeccccccc
Q 018507 286 SIEHAQQHGHTH----LSEIIENAKW---IRNKAVLLTHFSSRYHIEDIRQAVLKLQS-KVSAKVVPLTEGFKS 351 (355)
Q Consensus 286 ~~~~a~~~~H~~----~~~a~~~~~~---~~~k~~vltH~s~~~~~~~l~~~~~~~~~-~~~~~v~~a~dGl~~ 351 (355)
..|.. .++..+.+++ .+.+.++.+|...+ .+++...+.++.+ ..-.++.++.||+..
T Consensus 385 -------~~h~s~~~~~~~l~~~i~~~~~~~g~vlIp~fa~GR--~qell~~l~~~~~~~~~~~~~V~~dg~~~ 449 (636)
T 2ycb_A 385 -------DVQPSRNRAEKELVKTIYSTLRRGGKILIPVFAVGR--AQELMIVLEEYIRTGIIDEVPVYIDGMIW 449 (636)
T ss_dssp -------GCCCCHHHHHHHHHHHHHHHHHHTCCEEEECCTTTH--HHHHHHHHHHHHHTTSSCCCCEEEEHHHH
T ss_pred -------CCCCCHHHHHHHHHHHHHHHHHcCCEEEEEECCCcH--HHHHHHHHHHHHHhCCCCCCeEEEehHHH
Confidence 12322 2334444443 35555555553222 3455555554432 111245667788643
No 22
>4b87_A DNA cross-LINK repair 1A protein; dclre1A, DCLRE, interstrand crosslink repair, hydrolase, NIT mustard, cancer, chemotherapy, PSO2 homolog,; HET: DNA; 2.16A {Homo sapiens}
Probab=99.77 E-value=7.5e-18 Score=161.98 Aligned_cols=180 Identities=16% Similarity=0.136 Sum_probs=123.2
Q ss_pred CCcEEEEecCCCCccccccCEEEeccCCccccCChHHHHHHhCcCCCCCCEEecChhhHHHHHHHHHHHHhcCCCcCcee
Q 018507 98 PELKCAFDIGRCPTRAIQQNFVFITHGHLDHIGGLPMYVASRGLYNLKPPTIFVPPSIKEDVEKLFEIHRSLGNVELNLD 177 (355)
Q Consensus 98 ~~~~iLID~G~~~~~~~~id~I~lTH~H~DHi~GL~~l~~~~~~~~~~~~~Iy~~~~~~~~l~~~~~~~~~~~~~~~~~~ 177 (355)
+|..++||+... ...-+||+|||||.|.||++|++. . ...+||+++.+.+.++..+. . ....
T Consensus 35 pG~~ilVD~f~~-~~~~~IdaI~lTH~H~DHiggl~~-----~----~~~pIy~s~~t~~ll~~~l~----~----~~~~ 96 (367)
T 4b87_A 35 PGTGFTVDAFQY-GVVEGCTAYFLTHFHSDHYAGLSK-----H----FTFPVYCSEITGNLLKNKLH----V----QEQY 96 (367)
T ss_dssp TTSSEEESCCSS-SSCTTCCEEECCCCCHHHHTTCST-----T----CCSCEEECHHHHHHHHHHSC----C----CGGG
T ss_pred CCCeEEEeCCCc-CCccCCcEEEECcChHHHhCCccc-----c----cCCcEEECHHHHHHHHHHhc----c----ccce
Confidence 677899998654 222379999999999999999982 1 13569999999988875431 1 1235
Q ss_pred EEEcCCCCeeeecCCeEEEEEEcCCCCCCeEEEEEEcchhhhhhhcccchHHHHHHHhcCceecceeeCCeEEEEcCCCC
Q 018507 178 LVALDVGETYEMRNDIVVRPFKTHHVIPSQGYVIYLLRKKLKKQYIHLKGKQIEKLKKSGVEITDIILSPEVAFTGDTTS 257 (355)
Q Consensus 178 ~~~l~~g~~~~i~~g~~v~~~~~~H~~~~~g~~i~~~~~~l~~~~~~~~~~~~~~Lk~~G~~i~~~~~~~~i~y~gDt~~ 257 (355)
++.++.++++.++ +++|++++++|.+++++|+|+..+ | .+++|+||++.
T Consensus 97 ~~~l~~g~~~~ig-~~~v~~~~agH~~gs~~~~i~~~~---------------------g---------~~il~tGD~~~ 145 (367)
T 4b87_A 97 IHPLPLDTECIVN-GVKVVLLDANHCPGAVMILFYLPN---------------------G---------TVILHTGDFRA 145 (367)
T ss_dssp EEECCBTSCEEET-TEEEEEEECSSSTTCEEEEEECTT---------------------S---------CEEEECCSCCC
T ss_pred EEEeCCCCEEEEC-CEEEEEEeCCCcCCcEEEEEEcCC---------------------C---------cEEEEecCccc
Confidence 7788889999996 999999999999999999998532 1 26999999997
Q ss_pred CccCCcccccc-CCCCEEEEecccCCCcccHHHHhhcCCCcHHHHHH-----HHHH--cCCCeEEEEecCCCCChhHHHH
Q 018507 258 EFMLNPRNADA-LRAKILITEATFLDDEMSIEHAQQHGHTHLSEIIE-----NAKW--IRNKAVLLTHFSSRYHIEDIRQ 329 (355)
Q Consensus 258 ~~~~~~~~~~~-~~~d~Li~e~t~~~~~~~~~~a~~~~H~~~~~a~~-----~~~~--~~~k~~vltH~s~~~~~~~l~~ 329 (355)
...... .... .++|+||+||||.+.. ..|.+-+++.+ +.+. .+.+.++++-.+.-...+++..
T Consensus 146 ~~~~~~-~~l~~~~~D~Li~EsTy~~~~--------~~~ps~~~~~~~~~~~i~~~~~~~g~~~v~~~a~~igr~q~ll~ 216 (367)
T 4b87_A 146 DPSMER-SLLADQKVHMLYLDTTYCSPE--------YTFPSQQEVIRFAINTAFEAVTLNPHALVVCGTYSIGKEKVFLA 216 (367)
T ss_dssp CGGGGG-SGGGTSCCCEEEECCTTCSTT--------CCCCCHHHHHHHHHHHHHHHHHHCTTEEEEEEESSSCCHHHHHH
T ss_pred Ccccch-hhhccCCCCEEEEecccCCCC--------CCCCCHHHHHHHHHHHHHHHHHhCCCeEEEEccchhHHHHHHHH
Confidence 433221 1122 4899999999998643 34555555443 2222 2455544443333333455555
Q ss_pred HHHHhc
Q 018507 330 AVLKLQ 335 (355)
Q Consensus 330 ~~~~~~ 335 (355)
.++++.
T Consensus 217 ia~~~g 222 (367)
T 4b87_A 217 IADVLG 222 (367)
T ss_dssp HHHHTT
T ss_pred HHHHhC
Confidence 555543
No 23
>1vjn_A Zn-dependent hydrolase of metallo-beta-lactamase superfamily TM0207; metallo-hydrolase/oxidoreductase fold, structural genomics; 2.00A {Thermotoga maritima} SCOP: d.157.1.4
Probab=99.76 E-value=8.9e-18 Score=150.43 Aligned_cols=148 Identities=14% Similarity=0.140 Sum_probs=104.2
Q ss_pred ceEEEEe--CCcEEEEecCCCC---cc-ccccCEEEeccCCccccCChHHHHHHhCcCCCCCCEEecChhhHHHHHHHHH
Q 018507 91 HETCVII--PELKCAFDIGRCP---TR-AIQQNFVFITHGHLDHIGGLPMYVASRGLYNLKPPTIFVPPSIKEDVEKLFE 164 (355)
Q Consensus 91 ~~s~~~i--~~~~iLID~G~~~---~~-~~~id~I~lTH~H~DHi~GL~~l~~~~~~~~~~~~~Iy~~~~~~~~l~~~~~ 164 (355)
..+|+++ ++..+|||||.+. .. ..++|+||+||.|+||++ ++.+. ..+.++
T Consensus 19 ~~~~~li~~~~~~iLiD~g~~~~~~~~~~~~id~VliTH~H~DH~~-~~~l~--------~~~~vi-------------- 75 (220)
T 1vjn_A 19 GHACFALEMEGKTIVTDPFDESVGYPIPNVTADVVTESHQHFDHNA-HHLVK--------GNFRVI-------------- 75 (220)
T ss_dssp ETTEEEEEETTEEEEESCCC-----CCCCCBCSEEECSSCC---CG-GGGCB--------SSCEEE--------------
T ss_pred cCCEEEEEECCEEEEEcCCCCcCCCCcCCCCcCEEEECCCCCCCCC-chHhc--------CCCEEE--------------
Confidence 3445665 6779999998763 11 237999999999999997 65331 112333
Q ss_pred HHHhcCCCcCceeEEEcCCCCeeeecCCeEEEEEEcCCCCC-------CeEEEEEEcchhhhhhhcccchHHHHHHHhcC
Q 018507 165 IHRSLGNVELNLDLVALDVGETYEMRNDIVVRPFKTHHVIP-------SQGYVIYLLRKKLKKQYIHLKGKQIEKLKKSG 237 (355)
Q Consensus 165 ~~~~~~~~~~~~~~~~l~~g~~~~i~~g~~v~~~~~~H~~~-------~~g~~i~~~~~~l~~~~~~~~~~~~~~Lk~~G 237 (355)
.. +..++++ +++|+++++.|... ++||+|+.++
T Consensus 76 ----------------~~-~g~~~~~-~~~I~~~~~~H~~~~g~~~g~~~g~~i~~~g---------------------- 115 (220)
T 1vjn_A 76 ----------------DR-PGAYTVN-GVKIKGVETFHDPSHGRERGKNIVFVFEGEG---------------------- 115 (220)
T ss_dssp ----------------CS-SEEEEET-TEEEEEEEEEEC-------CEEEEEEEEETT----------------------
T ss_pred ----------------cC-CCeEEEC-CEEEEEEeeecCCCCCccCCCcEEEEEEECC----------------------
Confidence 11 1256775 99999999999863 6999998653
Q ss_pred ceecceeeCCeEEEEcCCCCCccCCccccccCCCCEEEEecccCCCcccHHHHhhcCCCcHHHHHHHHHHcCCCeEEEEe
Q 018507 238 VEITDIILSPEVAFTGDTTSEFMLNPRNADALRAKILITEATFLDDEMSIEHAQQHGHTHLSEIIENAKWIRNKAVLLTH 317 (355)
Q Consensus 238 ~~i~~~~~~~~i~y~gDt~~~~~~~~~~~~~~~~d~Li~e~t~~~~~~~~~~a~~~~H~~~~~a~~~~~~~~~k~~vltH 317 (355)
.+++|+||+...+.. ...+.+.++|++++++.. ..|++.++|.++++++++++++++|
T Consensus 116 ---------~~i~~~GDt~~~~~~-~~~~~~~~~Dvlil~~g~------------~~h~~~~~a~~~~~~~~~k~vi~~H 173 (220)
T 1vjn_A 116 ---------IKVCHLGDLGHVLTP-AQVEEIGEIDVLLVPVGG------------TYTIGPKEAKEVADLLNAKVIIPMH 173 (220)
T ss_dssp ---------EEEEECTTCCSCCCH-HHHHHHCCCSEEEEECCS------------SSSCCHHHHHHHHHHTTCSEEEEES
T ss_pred ---------eEEEEeCCCCCcchH-HHHHhhCCCCEEEEcCCC------------cCcCCHHHHHHHHHhcCCCEEEEEe
Confidence 279999999873321 123345689999999832 3699999999999999999999999
Q ss_pred cCCCCC
Q 018507 318 FSSRYH 323 (355)
Q Consensus 318 ~s~~~~ 323 (355)
++..+.
T Consensus 174 ~~~~~~ 179 (220)
T 1vjn_A 174 YKTKYL 179 (220)
T ss_dssp CCCSSC
T ss_pred cccccc
Confidence 999753
No 24
>2xr1_A Cleavage and polyadenylation specificity factor 1 subunit; hydrolase, metallo-beta-lactamase, beta-CAsp, RNA processing; 2.59A {Methanosarcina mazei}
Probab=99.76 E-value=5.4e-17 Score=166.80 Aligned_cols=228 Identities=20% Similarity=0.252 Sum_probs=141.9
Q ss_pred CeEEEEEeecC--ceEEEEe--CCcEEEEecCCCCc---------------cccccCEEEeccCCccccCChHHHHHHhC
Q 018507 80 GYTIEGVSIGG--HETCVII--PELKCAFDIGRCPT---------------RAIQQNFVFITHGHLDHIGGLPMYVASRG 140 (355)
Q Consensus 80 ~~~i~~~~~g~--~~s~~~i--~~~~iLID~G~~~~---------------~~~~id~I~lTH~H~DHi~GL~~l~~~~~ 140 (355)
.+.|...+.++ ..+|+++ ++..+|||||.+.. ...+||+|||||.|.||++|++.++.. .
T Consensus 183 ~m~I~~LG~~~evg~s~~LI~~~~~~ILID~G~~~~~~~~~l~~l~~~~~~~~~~Id~VllTH~H~DHiGgl~~L~~~-~ 261 (640)
T 2xr1_A 183 WVRVTALGGCKEVGRSCFLLSTPESRILIDCGVNVGSDENMTPYLYVPEVFPLNQIDAVIVTHAHLDHQGLVPLLFKY-G 261 (640)
T ss_dssp CCEEEEEECSSSSBCCEEEEECSSCEEEECCCCBCSSCSSCCCCTTSTTTCSGGGCCEEECCSSCHHHHTTHHHHHHT-T
T ss_pred ceEEEEEecCCCCCCcEEEEEECCeEEEEeCCCCccccccccccccccccCCcccCcEEEECCCChhhhccHHHHHhc-C
Confidence 35666666543 2466766 56799999997632 112589999999999999999999752 1
Q ss_pred cCCCCCCEEecChhhHHHHHHHHHHHHhc----C-CCcC--------ceeEEEcCCCCeeeecCCeEEEEEEcCCCCCCe
Q 018507 141 LYNLKPPTIFVPPSIKEDVEKLFEIHRSL----G-NVEL--------NLDLVALDVGETYEMRNDIVVRPFKTHHVIPSQ 207 (355)
Q Consensus 141 ~~~~~~~~Iy~~~~~~~~l~~~~~~~~~~----~-~~~~--------~~~~~~l~~g~~~~i~~g~~v~~~~~~H~~~~~ 207 (355)
...+||+++.+.+.++..+.....+ + ...+ ...++.+.+++.+.+.++++|++++++|..+++
T Consensus 262 ----~~~~Iy~t~~t~~ll~~~l~d~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~g~~i~l~gg~~v~~~~~GH~~Gs~ 337 (640)
T 2xr1_A 262 ----YEGPVYCTPPTRDLMVLLQLDYIDVAAKEGKKIPYESGMVAKTLKHTIPLDYEEVTDIAPDIKLTFHNAGHILGSA 337 (640)
T ss_dssp ----CCSCEEECHHHHHHHHHHHHHHHHHHHHHTCCCCSCHHHHHHHHHTEEECCTTCCEEEETTEEEEEEECSSSTTCE
T ss_pred ----CCCeEEECHHHHHHHHHHHHHHHHHhhhcccCCCCCHHHHHHHHhceEEeCCCCEEEecCCEEEEEEcCCCCcCcE
Confidence 1246999999988876654321110 0 0000 014678889999999339999999999999999
Q ss_pred EEEEEEcchhhhhhhcccchHHHHHHHhcCceecceeeCCeEEEEcCCCCCc--cCCccccccCCCCEEEEecccCCCcc
Q 018507 208 GYVIYLLRKKLKKQYIHLKGKQIEKLKKSGVEITDIILSPEVAFTGDTTSEF--MLNPRNADALRAKILITEATFLDDEM 285 (355)
Q Consensus 208 g~~i~~~~~~l~~~~~~~~~~~~~~Lk~~G~~i~~~~~~~~i~y~gDt~~~~--~~~~~~~~~~~~d~Li~e~t~~~~~~ 285 (355)
+|.++.++.. .+++|+||+..+. ..........++|+||+|+||.+..
T Consensus 338 ~~~i~~~~~~-----------------------------~~ilftGD~~~~~~~ll~~~~~~~~~~DvLi~EsT~g~~~- 387 (640)
T 2xr1_A 338 ISHFHIGDGL-----------------------------HNVVFTGDYKYEKTRLFDPAVNKFPRVETVISEATYGNAN- 387 (640)
T ss_dssp EEEEEETTTT-----------------------------EEEEECCSCCSSCCSSCCCCCCBCSCCSEEEEECTTCSTT-
T ss_pred EEEEEECCce-----------------------------EEEEEECCCCCCCccccccccccCCCCcEEEECCCCCCCc-
Confidence 9999865310 1699999998743 2211112345899999999997642
Q ss_pred cHHHHhhcCCCcH----HHHHHHHHHc--CCCeEEEEecCCCCChhHHHHHHHHhccc-ccCceeecccccc
Q 018507 286 SIEHAQQHGHTHL----SEIIENAKWI--RNKAVLLTHFSSRYHIEDIRQAVLKLQSK-VSAKVVPLTEGFK 350 (355)
Q Consensus 286 ~~~~a~~~~H~~~----~~a~~~~~~~--~~k~~vltH~s~~~~~~~l~~~~~~~~~~-~~~~v~~a~dGl~ 350 (355)
..|... ++..+.+++. ...++++..|+-. ..+++...++++.+. .-.++.++.||+.
T Consensus 388 -------~~h~s~~~~~~~l~~~i~~~~~~~g~vlIp~favG-R~qell~~l~~~~~~~~~~~~~V~~dg~a 451 (640)
T 2xr1_A 388 -------AFQPALKDAEKHLQMVVKNTIERGGIAVIPAFAVG-RSQEVMIVLEESIRKGLIPEVPVYLDGMI 451 (640)
T ss_dssp -------CCCCCHHHHHHHHHHHC--------CEEEECCTTT-HHHHHHHHHHHHHHHTSSCCCCEEEESSH
T ss_pred -------cCCCCHHHHHHHHHHHHHHHHhcCCeEEEEecccc-hHHHHHHHHHHHHHhCCCCCCcEEEEhHH
Confidence 123332 2233333321 1245666666622 234555555555331 1124566778864
No 25
>2p4z_A Metal-dependent hydrolases of the beta-lactamase superfamily II; metal-dependent hydrolases of the beta-lactamase superfamily hydrolase; 2.10A {Thermoanaerobacter tengcongensis}
Probab=99.75 E-value=4e-18 Score=158.49 Aligned_cols=210 Identities=18% Similarity=0.127 Sum_probs=131.6
Q ss_pred CceEEEEe--CCcEEEEecCCCCc--cc---c-----ccCEEEeccCCccccCChHHHHHHhCcCCCCCCEEecChhhHH
Q 018507 90 GHETCVII--PELKCAFDIGRCPT--RA---I-----QQNFVFITHGHLDHIGGLPMYVASRGLYNLKPPTIFVPPSIKE 157 (355)
Q Consensus 90 ~~~s~~~i--~~~~iLID~G~~~~--~~---~-----~id~I~lTH~H~DHi~GL~~l~~~~~~~~~~~~~Iy~~~~~~~ 157 (355)
.+.+|+++ ++..+|||||.+.. .+ + +|++||+||.|+||++|++.+...+ ..++||+++.+.+
T Consensus 31 ~~g~s~li~~~~~~iLiD~G~~~~~~~~l~~~g~~~~~i~~v~lTH~H~DH~ggl~~~~~~~-----~~~~v~~~~~~~~ 105 (284)
T 2p4z_A 31 EHGLSLLLKKGNKEIVVDTGQSENFIKNCGLMGIDVGRIKKVVLTHGHYDHIGGLKGLLERN-----PEVKIYTHKEILN 105 (284)
T ss_dssp CSSCEEEEEETTEEEEECCCSSTHHHHHHHHTTCCGGGCCEEECCCSCHHHHTTHHHHHHHC-----TTCEEEEEGGGGS
T ss_pred CCEEEEEEEECCeEEEEeCCCCHHHHHHHHHcCCChhhCCEEEECCCCchhhccHHHHHHHc-----CCCceecCHHHHH
Confidence 34556666 56789999998753 11 1 5899999999999999999886522 3467999887743
Q ss_pred -HHHHHHHHHHhcCC--Cc----CceeEEEcCCCCeeeecCC-eEEEEEEcCCCCCC-e--EEEEEEcchhhhhhhcccc
Q 018507 158 -DVEKLFEIHRSLGN--VE----LNLDLVALDVGETYEMRND-IVVRPFKTHHVIPS-Q--GYVIYLLRKKLKKQYIHLK 226 (355)
Q Consensus 158 -~l~~~~~~~~~~~~--~~----~~~~~~~l~~g~~~~i~~g-~~v~~~~~~H~~~~-~--g~~i~~~~~~l~~~~~~~~ 226 (355)
.+.........+.. .. ...+++.++ ..+++.+| +.+..++..|..+. . +|+++
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~i~~gi~~i~~~~~~h~~~~~~g~~~~~~-------------- 169 (284)
T 2p4z_A 106 KKYAMRKGGQFEEIGFDLSFYEKYKNNFVLID--KDAEIEEGFYVITNTDITYDNEFTTKNFFVEK-------------- 169 (284)
T ss_dssp CEEEECSSSCEEECSCCHHHHHHHGGGEEEES--SCEEEETTEEEECSCCCCSCCHHHHTTEEEEE--------------
T ss_pred HHhccCccccccccccccchhhhcCceEEEeC--CCeEEeCCEEEEeeeCCccccccCCCceEEEc--------------
Confidence 11000000000000 00 011344444 23555445 55667888887543 2 47775
Q ss_pred hHHHHHHHhcCceecceeeCCeEEEEcCCCCCccCCccccccCCCC--EEEEecccCCCcccHHH----H--------hh
Q 018507 227 GKQIEKLKKSGVEITDIILSPEVAFTGDTTSEFMLNPRNADALRAK--ILITEATFLDDEMSIEH----A--------QQ 292 (355)
Q Consensus 227 ~~~~~~Lk~~G~~i~~~~~~~~i~y~gDt~~~~~~~~~~~~~~~~d--~Li~e~t~~~~~~~~~~----a--------~~ 292 (355)
.++|++|+.. ++....++++| +||.+|+...-.-..+. . ..
T Consensus 170 ---------------------~~~y~~D~~~----de~~~~~~~~dglvli~gcsH~Gi~n~l~~~~~~~~~~~i~~~ig 224 (284)
T 2p4z_A 170 ---------------------EGKRIPDKFL----DEVFVVVKEEDGINVVTGCSHAGILNILETARNRFGVSYIKSLIG 224 (284)
T ss_dssp ---------------------TTEEEECCCT----TCCEEEEEETTEEEEEESSCTTCHHHHHHHHHHHHTCSCBSEEEE
T ss_pred ---------------------CCCEecCCCC----CceEEEEEcCCcEEEEECCCCcCHHHHHHHHHHHcCCCceEEEEE
Confidence 2589999533 22334566789 77888763210000000 0 12
Q ss_pred cCCC------cHHHHHHHHHHcCCCeEEEEecCCCCChhHHHHHHHHhcccccCceeecccccccc
Q 018507 293 HGHT------HLSEIIENAKWIRNKAVLLTHFSSRYHIEDIRQAVLKLQSKVSAKVVPLTEGFKSV 352 (355)
Q Consensus 293 ~~H~------~~~~a~~~~~~~~~k~~vltH~s~~~~~~~l~~~~~~~~~~~~~~v~~a~dGl~~~ 352 (355)
..|+ ++++++++++++++++++++|+++....+ ++++.++.++.+|+|||++.
T Consensus 225 g~Hl~~~~~~~~~~a~~~~~~~~~~~l~l~H~~~~~~~~-------~~~~~~~~~v~~a~~G~~i~ 283 (284)
T 2p4z_A 225 GFHLRGMEEEKVKDIARKIEEYGVKKVLTGHCTGIDEYG-------FLKSVLKDKISYLTTSSSIV 283 (284)
T ss_dssp CCCCTTCCHHHHHHHHHHHHHTTBCCEEECGGGCHHHHH-------HHHHHHGGGEEECCTTCEEE
T ss_pred cccCCCCCHHHHHHHHHHHHcCCCCEEEeeCcCcHHHHH-------HHHHHhCCCEEEcCCCcEEe
Confidence 5699 99999999999999999999999965422 33445677899999999875
No 26
>3adr_A Putative uncharacterized protein ST1585; quorum sensing, quinolone signal, metallo-beta-lactamase FOL conserved hypothetical protein; HET: EPE; 1.80A {Sulfolobus tokodaii}
Probab=99.59 E-value=2.2e-14 Score=130.70 Aligned_cols=194 Identities=17% Similarity=0.238 Sum_probs=124.9
Q ss_pred ceEEEEe-C-CcEEEEecCCCCcc-----ccccCEEEeccCCccccCChHHHHHHhCcCCCCCCEEecChhhHHHHHHHH
Q 018507 91 HETCVII-P-ELKCAFDIGRCPTR-----AIQQNFVFITHGHLDHIGGLPMYVASRGLYNLKPPTIFVPPSIKEDVEKLF 163 (355)
Q Consensus 91 ~~s~~~i-~-~~~iLID~G~~~~~-----~~~id~I~lTH~H~DHi~GL~~l~~~~~~~~~~~~~Iy~~~~~~~~l~~~~ 163 (355)
..+|+++ + +..+|||+|.+... ..+|++||+||.|.||++|+..+...+ ..+||+++...+.+....
T Consensus 19 ~~~~~li~~~~~~iLiD~G~~~~~~~l~~~~~i~~vi~TH~H~DH~gg~~~l~~~~------~~~i~~~~~~~~~l~~~~ 92 (261)
T 3adr_A 19 IATVYVMCGEKLTVMIDAGVSNSIADFSFLDKLDYIVLTHLHIDHIGLLPELLQVY------KAKVLVKSGFKKYLTSED 92 (261)
T ss_dssp GSEEEEEECSSCEEEECCCCTTCCCCCTTCSCCCEEECSCCSGGGTTTHHHHHHHS------CCEEEEETTCTHHHHSHH
T ss_pred ceEEEEEEcCCcEEEEeCCCCCChhhcCCCCCCcEEEECCCCccccCCHHHHHHHh------CCeEEECHHHHHHhcCch
Confidence 4567777 3 57899999977531 136999999999999999999887532 367999887766554210
Q ss_pred ----------HHH----HhcCC--CcC-ceeEEEcCCCCeeeecCCeEEEEEEc-CCCCCCeEEEEEEcchhhhhhhccc
Q 018507 164 ----------EIH----RSLGN--VEL-NLDLVALDVGETYEMRNDIVVRPFKT-HHVIPSQGYVIYLLRKKLKKQYIHL 225 (355)
Q Consensus 164 ----------~~~----~~~~~--~~~-~~~~~~l~~g~~~~i~~g~~v~~~~~-~H~~~~~g~~i~~~~~~l~~~~~~~ 225 (355)
..+ ..+.. ... ..++..++.++.+.++ +++++++++ +|+.++++|.++
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g-~~~i~~~~~pGHt~~~~~~~~~------------- 158 (261)
T 3adr_A 93 GLKKLNESAEKVLGDLYYVYGGLEKKLDQDKVIEVEGNEEFDLG-GYRMRLIYTPGHARHHMSVLVD------------- 158 (261)
T ss_dssp HHHHHHHHHHHHHTHHHHHHCCCCSCCCGGGEEEECSCCEEECS-SSEEEEEECTTSCTTCEEEEET-------------
T ss_pred hHHHHHHHHHHHHHHHHHHhcccccCCCccceEecCCCCEEEEC-CEEEEEEECCCCCCccEEEEEC-------------
Confidence 000 01111 011 1246778889999996 999999998 599999999652
Q ss_pred chHHHHHHHhcCceecceeeCCeEEEEcCCCCCccCCccccccCCCCEEEEecccCCCcccHHHHhhcCCCcHHHHHHHH
Q 018507 226 KGKQIEKLKKSGVEITDIILSPEVAFTGDTTSEFMLNPRNADALRAKILITEATFLDDEMSIEHAQQHGHTHLSEIIENA 305 (355)
Q Consensus 226 ~~~~~~~Lk~~G~~i~~~~~~~~i~y~gDt~~~~~~~~~~~~~~~~d~Li~e~t~~~~~~~~~~a~~~~H~~~~~a~~~~ 305 (355)
+++|+||+..... . ..+..+.... . .+..+.++++.+
T Consensus 159 ----------------------~~lf~GD~~~~~~--------~--~~~~~~~~~~-~----------~~~~~~~sl~~l 195 (261)
T 3adr_A 159 ----------------------DFLFTGDSAGAYF--------N--GVVIPTTPPV-I----------DYKMYMESLKRQ 195 (261)
T ss_dssp ----------------------TEEEEETSSCEEE--------T--TEEECCCCSC-C----------CHHHHHHHHHHH
T ss_pred ----------------------CEEEEcCcccccc--------c--ccccCCCCCC-C----------CHHHHHHHHHHH
Confidence 5999999975211 1 1222222111 1 112356778888
Q ss_pred HHcCCCeEEEEecCCCCChhHHHHHHHHhcccccCceeeccccc
Q 018507 306 KWIRNKAVLLTHFSSRYHIEDIRQAVLKLQSKVSAKVVPLTEGF 349 (355)
Q Consensus 306 ~~~~~k~~vltH~s~~~~~~~l~~~~~~~~~~~~~~v~~a~dGl 349 (355)
.+++++.+++.|...... ++..+.++++...+...|. ..+|.
T Consensus 196 ~~l~~~~v~~~H~~~~~~-~~~~~~l~~~~~~~~~~i~-~~~g~ 237 (261)
T 3adr_A 196 IELKPKVVGFAHGGLVSP-KIMEEHLKQMLSKEEIQIN-VDIGG 237 (261)
T ss_dssp HHTCCSEEEETTTEEECT-HHHHHHHHHHHCSSCCCCC-CCCCH
T ss_pred HcCCCCEEEeCCCCccCC-cCHHHHHHHHHHHHHHHHH-hcCCC
Confidence 888999999999887653 1344555555544444443 44454
No 27
>3l6n_A Metallo-beta-lactamase; zinc, hydolase, antibiotics resistance, hydrolase; 1.65A {Chryseobacterium indologenes} SCOP: d.157.1.0
Probab=99.47 E-value=9e-13 Score=116.84 Aligned_cols=103 Identities=15% Similarity=0.114 Sum_probs=79.2
Q ss_pred eEEEEe--CCcEEEEecCCCCcc------------ccccCEEEeccCCccccCChHHHHHHhCcCCCCCCEEecChhhHH
Q 018507 92 ETCVII--PELKCAFDIGRCPTR------------AIQQNFVFITHGHLDHIGGLPMYVASRGLYNLKPPTIFVPPSIKE 157 (355)
Q Consensus 92 ~s~~~i--~~~~iLID~G~~~~~------------~~~id~I~lTH~H~DHi~GL~~l~~~~~~~~~~~~~Iy~~~~~~~ 157 (355)
.+|+++ ++..+|||||..... ..+|++||+||.|.||++|+..+.. . .++||+++.+.+
T Consensus 31 ~n~~li~~~~~~iLiD~G~~~~~~~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~l~~-~------~~~v~~~~~~~~ 103 (219)
T 3l6n_A 31 ANSMYLVTKKGVVLFDVPWEKVQYQSLMDTIKKRHNLPVVAVFATHSHDDRAGDLSFFNN-K------GIKTYATAKTNE 103 (219)
T ss_dssp EEEEEEEETTEEEEESCCSSGGGHHHHHHHHHHHHSCCEEEEECSSSSTTTTCCTHHHHH-T------TCEEEECHHHHH
T ss_pred ceEEEEEeCCEEEEEeCCCChHHHHHHHHHHHHhcCCceeEEEecCCCcccccCHHHHHh-C------CCEEEEcHHHHH
Confidence 456666 567899999976421 1269999999999999999999864 1 467999998877
Q ss_pred HHHHHHHHHHhcCCCcCceeEEEcCCCCeeeecCCeEEEEEE--cCCCCCCeEEEEE
Q 018507 158 DVEKLFEIHRSLGNVELNLDLVALDVGETYEMRNDIVVRPFK--THHVIPSQGYVIY 212 (355)
Q Consensus 158 ~l~~~~~~~~~~~~~~~~~~~~~l~~g~~~~i~~g~~v~~~~--~~H~~~~~g~~i~ 212 (355)
.++... .......++.++.+.++ +++++++. .+|+.++++|.+.
T Consensus 104 ~~~~~~----------~~~~~~~~~~g~~~~~g-~~~i~~~~~~pgHt~g~~~~~~~ 149 (219)
T 3l6n_A 104 FLKKDG----------KATSTEIIKTGKPYRIG-GEEFVVDFLGEGHTADNVVVWFP 149 (219)
T ss_dssp HHHHTT----------CCCCSEECCTTSEEEET-TEEEEEECCCCSSSSSCCEEEET
T ss_pred HHHhcC----------CCCCcEecCCCCEEEEC-CEEEEEEeCCCCCCCCCEEEEEC
Confidence 765421 12245677889999996 99999997 3999999999884
No 28
>2xf4_A Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A {Salmonella enterica}
Probab=99.43 E-value=6.6e-13 Score=117.02 Aligned_cols=115 Identities=17% Similarity=0.217 Sum_probs=80.3
Q ss_pred ceEEEEe----CCcEEEEecCCCCccc--------cccCEEEeccCCccccCChHHHHHHhCcCCCCCCEEecChhhHHH
Q 018507 91 HETCVII----PELKCAFDIGRCPTRA--------IQQNFVFITHGHLDHIGGLPMYVASRGLYNLKPPTIFVPPSIKED 158 (355)
Q Consensus 91 ~~s~~~i----~~~~iLID~G~~~~~~--------~~id~I~lTH~H~DHi~GL~~l~~~~~~~~~~~~~Iy~~~~~~~~ 158 (355)
..+|+++ ++..+|||+|.+.... .++++||+||.|.||++|+..+.... +++||+++...+.
T Consensus 12 ~~n~~li~~~~~~~~iLiD~G~~~~~l~~~l~~~g~~i~~ii~TH~H~DH~gg~~~l~~~~------~~~v~~~~~~~~~ 85 (210)
T 2xf4_A 12 SQNCSLIWCEQTRLAALVDPGGDAEKIKQEVDASGVTLMQILLTHGHLDHVGAASELAQHY------GVPVIGPEKEDEF 85 (210)
T ss_dssp TEEEEEEECTTTCEEEEECCCSCHHHHHHHHHHHTCEEEEEECSCSCHHHHTTHHHHHHHH------TCCEECCCGGGHH
T ss_pred ccEEEEEEecCCCcEEEEcCCCCHHHHHHHHHHcCCceeEEEECCCChhhhcCHHHHHHHc------CCcEEEecchHHH
Confidence 3556666 2468999999754321 26899999999999999999887533 2569999888777
Q ss_pred HHHHHHHHH-hcCC--CcCceeEEEcCCCCeeeecCCeEEEEEEc-CCCCCCeEEEEE
Q 018507 159 VEKLFEIHR-SLGN--VELNLDLVALDVGETYEMRNDIVVRPFKT-HHVIPSQGYVIY 212 (355)
Q Consensus 159 l~~~~~~~~-~~~~--~~~~~~~~~l~~g~~~~i~~g~~v~~~~~-~H~~~~~g~~i~ 212 (355)
+.+.+.... .++. .......+.+++++.+.++ +.+++++++ +|+.++++|+++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g-~~~i~~~~~pgHt~g~~~~~~~ 142 (210)
T 2xf4_A 86 WLQGLPAQSRMFGLDECQPLTPDRWLNDGDRVSVG-NVTLQVLHCPGHTPGHVVFFDE 142 (210)
T ss_dssp HHHTHHHHHHHTTCCCCCCCCCSBCCCTTCEEEET-TEEEEEEECCSSSTTCEEEEET
T ss_pred HhccchhhhhhcCCcccCCCCCceEECCCCEEEEC-CeEEEEEECCCCCCCcEEEEeC
Confidence 655332211 1111 0111123456788999996 899999988 799999999874
No 29
>2bib_A CBPE, teichoic acid phosphorylcholine esterase/ choline protein; choline-binding protein, PCE, phosphorylcholine estera hydrolase; HET: PC BTB; 1.92A {Streptococcus pneumoniae} SCOP: b.109.1.1 d.157.1.8 PDB: 1wra_A*
Probab=99.41 E-value=4.9e-13 Score=135.03 Aligned_cols=200 Identities=14% Similarity=0.173 Sum_probs=121.9
Q ss_pred cCeEEEEEeec-CceEEEEe--CCcEEEEecCCCCc----------------------------cc------cccCEEEe
Q 018507 79 EGYTIEGVSIG-GHETCVII--PELKCAFDIGRCPT----------------------------RA------IQQNFVFI 121 (355)
Q Consensus 79 ~~~~i~~~~~g-~~~s~~~i--~~~~iLID~G~~~~----------------------------~~------~~id~I~l 121 (355)
..+.|..+..| ++..|++| ++..+|||+|.... .. -+||+||+
T Consensus 4 ~~~~I~~ldvG~gqg~~~lI~~~~~~iLID~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~~id~vil 83 (547)
T 2bib_A 4 SGNKIHFINVQEGGSDAIILESNGHFAMVDTGEDYDFPDGSDSRYPWREGIETSYKHVLTDRVFRRLKELSVQKLDFILV 83 (547)
T ss_dssp SCEEEEEECBSSSBCCEEEEEETTEEEEEECCCCSCCCCSSSTTSCCCTTCCCCGGGCCHHHHHHHHHHTTCCCBSCEEC
T ss_pred cCceEEEEEcCCCCceEEEEEeCCeEEEEeCCCCCcccccccccccccccccccccchhHHHHHHHHHhcCcccccEEEE
Confidence 34667777777 45567776 56789999998621 00 14999999
Q ss_pred ccCCccccCChHHHHHHhCcCCCCCCEEecChhhHHHH-------------HHHHHHHHhcCCCcCceeEE--EcCCCCe
Q 018507 122 THGHLDHIGGLPMYVASRGLYNLKPPTIFVPPSIKEDV-------------EKLFEIHRSLGNVELNLDLV--ALDVGET 186 (355)
Q Consensus 122 TH~H~DHi~GL~~l~~~~~~~~~~~~~Iy~~~~~~~~l-------------~~~~~~~~~~~~~~~~~~~~--~l~~g~~ 186 (355)
||.|.||++|++.++.... ..+||+++.....+ +..+..... ..+.+. .+..++.
T Consensus 84 TH~H~DHiggl~~l~~~~~-----~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~~~~~g~~ 153 (547)
T 2bib_A 84 THTHSDHIGNVDELLSTYP-----VDRVYLKKYSDSRITNSERLWDNLYGYDKVLQTATE-----TGVSVIQNITQGDAH 153 (547)
T ss_dssp CCSCHHHHTTHHHHHHHSC-----BSEEECCCCCGGGBSCGGGCTTHHHHHHHHHHHHHH-----TTCEEECSCCTTTTE
T ss_pred cCCCccccCCHHHHHHhCC-----ccEEEECcccccccCChHHHHhHHHHHHHHHHHHHH-----hCCeEEEeecCCCce
Confidence 9999999999999976432 23588776543221 111111111 112332 3467788
Q ss_pred eeecCCeEEEEEEc---CCC-----------CCCeEEEEEEcchhhhhhhcccchHHHHHHHhcCceecceeeCCeEEEE
Q 018507 187 YEMRNDIVVRPFKT---HHV-----------IPSQGYVIYLLRKKLKKQYIHLKGKQIEKLKKSGVEITDIILSPEVAFT 252 (355)
Q Consensus 187 ~~i~~g~~v~~~~~---~H~-----------~~~~g~~i~~~~~~l~~~~~~~~~~~~~~Lk~~G~~i~~~~~~~~i~y~ 252 (355)
+.++ +++|++++. .|. ..+++|+++.++ .+++|+
T Consensus 154 ~~~g-~~~i~~l~~~~~~h~~~~~~~~~~~n~~S~vl~i~~~~-------------------------------~~iLft 201 (547)
T 2bib_A 154 FQFG-DMDIQLYNYENETDSSGELKKIWDDNSNSLISVVKVNG-------------------------------KKIYLG 201 (547)
T ss_dssp EEET-TEEEEEESCSCCBCTTSCBCCBSSGGGGCCEEEEEETT-------------------------------EEEEEC
T ss_pred EecC-CeeEEEecCccccCccccccccCCCCCCcEEEEEEECC-------------------------------EEEEec
Confidence 9996 999999974 332 357899997653 279999
Q ss_pred cCCCCCccCCccc-cccCCCCEEEEecccCCCcccHHHHhhcCCCcHHHHHHHHHHcCCCeEEEEecCC-CC--ChhHHH
Q 018507 253 GDTTSEFMLNPRN-ADALRAKILITEATFLDDEMSIEHAQQHGHTHLSEIIENAKWIRNKAVLLTHFSS-RY--HIEDIR 328 (355)
Q Consensus 253 gDt~~~~~~~~~~-~~~~~~d~Li~e~t~~~~~~~~~~a~~~~H~~~~~a~~~~~~~~~k~~vltH~s~-~~--~~~~l~ 328 (355)
||+......+... .....+|+|++.- ++-+......+++++++|+.++++.-.. ++ +.++..
T Consensus 202 GD~~~~~~~e~~l~~~~~~~DvLkv~H--------------HG~S~~s~s~~fl~~v~P~~aiiS~g~~n~~~hP~~evl 267 (547)
T 2bib_A 202 GDLDNVHGAEDKYGPLIGKVDLMKFNH--------------HHDTNKSNTKDFIKNLSPSLIVQTSDSLPWKNGVDSEYV 267 (547)
T ss_dssp TTCCSTTSHHHHHHHHHCCCSEEECTT--------------TTBCSSSSCHHHHHHHCCSEEEESBSSCSBSSSBCHHHH
T ss_pred CCccchhhhhhhhcccccceeEEEecc--------------ccCcccCChHHHHHhcCCcEEEEcCCcccccCCCCHHHH
Confidence 9998631111111 1234799998621 1001112346777888999888776432 22 345565
Q ss_pred HHHHHh
Q 018507 329 QAVLKL 334 (355)
Q Consensus 329 ~~~~~~ 334 (355)
+.+++.
T Consensus 268 ~~l~~~ 273 (547)
T 2bib_A 268 NWLKER 273 (547)
T ss_dssp HHHHTT
T ss_pred HHHHhC
Confidence 555554
No 30
>4ax1_B Metallo-beta-lactamase AIM-1; hydrolase, antibiotic resistance, acquired B3, drug binding; 1.40A {Pseudomonas aeruginosa} PDB: 4awy_B 4awz_A 4ax0_B
Probab=99.40 E-value=1.6e-12 Score=120.71 Aligned_cols=118 Identities=9% Similarity=0.128 Sum_probs=83.7
Q ss_pred CceEEEEe--CCcEEEEecCCCCcc-c---------c---ccCEEEeccCCccccCChHHHHHHhCcCCCCCCEEecChh
Q 018507 90 GHETCVII--PELKCAFDIGRCPTR-A---------I---QQNFVFITHGHLDHIGGLPMYVASRGLYNLKPPTIFVPPS 154 (355)
Q Consensus 90 ~~~s~~~i--~~~~iLID~G~~~~~-~---------~---~id~I~lTH~H~DHi~GL~~l~~~~~~~~~~~~~Iy~~~~ 154 (355)
++.+|+++ ++..+|||+|..... . + +|++||+||.|.||++|+..+.... .++||+++.
T Consensus 56 ~~~~~~li~~~~~~iLiD~G~~~~~~~~~~~l~~~g~~~~~i~~ii~TH~H~DH~gg~~~l~~~~------~~~v~~~~~ 129 (303)
T 4ax1_B 56 CGISALLVTSDAGHILVDAATPQAGPQILANIRALGFRPEDVRAIVFSHEHFDHAGSLAELQKAT------GAPVYARAP 129 (303)
T ss_dssp SSSCCEEECCTTCEEEECCBSTTCHHHHHHHHHHTTCCGGGEEEEECSCSSHHHHTTHHHHHHHH------CCCEEEEHH
T ss_pred CCceEEEEEeCCcEEEEECCCcccHHHHHHHHHHcCCCHHHCcEEEcCCCCccccCCHHHHHhhc------CCEEEEcHH
Confidence 34556666 467899999964211 0 1 3899999999999999999987532 246999999
Q ss_pred hHHHHHHHHHH-----HHhcCCCcCceeEEEcCCCCeeeecCCeEEEEEEc-CCCCCCeEEEEEEc
Q 018507 155 IKEDVEKLFEI-----HRSLGNVELNLDLVALDVGETYEMRNDIVVRPFKT-HHVIPSQGYVIYLL 214 (355)
Q Consensus 155 ~~~~l~~~~~~-----~~~~~~~~~~~~~~~l~~g~~~~i~~g~~v~~~~~-~H~~~~~g~~i~~~ 214 (355)
+.+.++..... +............+.+.+|+.+.++ +.+|+++++ +|+.++++|.+...
T Consensus 130 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g-~~~v~~~~~pgHt~g~~~~~~~~~ 194 (303)
T 4ax1_B 130 AIDTLKRGLPDRTDPNFEVAEPVAPVANIVTLADDGVVSVG-PLALTAVASPGHTPGGTSWTWRSC 194 (303)
T ss_dssp HHHHHHHTSCCTTSTTGGGCCCCCCCSCEEEECTTCEEEET-TEEEEEEECCSSSTTCEEEEEEEE
T ss_pred HHHHHhccccCccccccccccCcCCCCCcEEeCCCCEEEEC-CeEEEEEeCCCCCccceEEEEEec
Confidence 88887654200 0000001112356788899999996 999999987 69999999999754
No 31
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3
Probab=99.40 E-value=1.5e-12 Score=125.99 Aligned_cols=107 Identities=21% Similarity=0.310 Sum_probs=82.2
Q ss_pred ceEEEEe-CCcEEEEecCCCCc-c-----------ccccCEEEeccCCccccCChHHHHHHhCcCCCCCCEEecChhhHH
Q 018507 91 HETCVII-PELKCAFDIGRCPT-R-----------AIQQNFVFITHGHLDHIGGLPMYVASRGLYNLKPPTIFVPPSIKE 157 (355)
Q Consensus 91 ~~s~~~i-~~~~iLID~G~~~~-~-----------~~~id~I~lTH~H~DHi~GL~~l~~~~~~~~~~~~~Iy~~~~~~~ 157 (355)
..+|+++ ++..+|||||.... . ..+|++||+||.|.||++|+..+...+ ...+||+++.+.+
T Consensus 34 ~~n~~li~~~~~iliD~G~~~~~~~~~~~l~~~~~~~~i~~iiiTH~H~DH~gg~~~l~~~~-----~~~~v~~~~~~~~ 108 (402)
T 1e5d_A 34 TYNAYLVEDEKTTLFDTVKAEYKGELLCGIASVIDPKKIDYLVIQHLELDHAGALPALIEAC-----QPEKIFTSSLGQK 108 (402)
T ss_dssp EEEEEEECSSSCEEECCCCGGGHHHHHHHHHTTSCGGGCCEEEECCCSHHHHTTHHHHHHHH-----CCSEEEEEHHHHH
T ss_pred ceEEEEEECCCEEEEeCCCCccHHHHHHHHHHhCCcccCCEEEeCCCCccccccHHHHHHHC-----CCCEEEEChHHHH
Confidence 4567777 45689999997621 0 126899999999999999999987633 2367999999988
Q ss_pred HHHHHHHHHHhcCCCcCceeEEEcCCCCeeeecCCeEEEEEEcC--CCCCCeEEEE
Q 018507 158 DVEKLFEIHRSLGNVELNLDLVALDVGETYEMRNDIVVRPFKTH--HVIPSQGYVI 211 (355)
Q Consensus 158 ~l~~~~~~~~~~~~~~~~~~~~~l~~g~~~~i~~g~~v~~~~~~--H~~~~~g~~i 211 (355)
.++..+. . ....++.++.++.+.++ +++++++++. |+++++++.+
T Consensus 109 ~~~~~~~----~----~~~~~~~~~~g~~~~~g-~~~~~~~~~p~gH~~~~~~~~~ 155 (402)
T 1e5d_A 109 AMESHFH----Y----KDWPVQVVKHGETLSLG-KRTVTFYETRMLHWPDSMVSWF 155 (402)
T ss_dssp HHHHHHC----C----SSCCEEEECTTCEEECS-SCEEEEEECTTSSSTTCEEEEE
T ss_pred HHHHHhC----C----CCCceEEcCCCCEEEEC-CCEEEEEeCCCCCCCCcEEEEE
Confidence 8766431 1 12356778889999996 8999999885 9999998876
No 32
>2r2d_A AGR_PTI_140P, Zn-dependent hydrolases; lactonase, N-acyl hompserine lactone, DI-nuclear zinc center quenching, AIIB, phosphate; HET: PO4; 1.75A {Agrobacterium tumefaciens}
Probab=99.39 E-value=1.6e-12 Score=119.40 Aligned_cols=113 Identities=14% Similarity=0.187 Sum_probs=79.3
Q ss_pred eEEEEe--CCcEEEEecCCCCcc---------------------------cc--------ccCEEEeccCCccccCChHH
Q 018507 92 ETCVII--PELKCAFDIGRCPTR---------------------------AI--------QQNFVFITHGHLDHIGGLPM 134 (355)
Q Consensus 92 ~s~~~i--~~~~iLID~G~~~~~---------------------------~~--------~id~I~lTH~H~DHi~GL~~ 134 (355)
.+|+++ ++..+|||||.+... ++ +|++||+||.|+||++|+..
T Consensus 43 ~~~~li~~~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~i~~VilTH~H~DH~gg~~~ 122 (276)
T 2r2d_A 43 VSAYLIQCTDATVLYDTGCHPECMGTNGRWPAQSQLNAPYIGASECNLPERLRQLGLSPDDISTVVLSHLHNDHAGCVEY 122 (276)
T ss_dssp EEEEEEECSSCEEEECCCSCTTCSSTTCSSCHHHHHHSCBCCCTTCSHHHHHHHTTCCGGGCSEEECSCCSTTTSTTGGG
T ss_pred eEEEEEECCCCCEEEECCCCcccccccccccHhHHhhcCCCCChhhCHHHHHHHcCCCHHHCCEEEecCcccccCCChhh
Confidence 456676 457899999976542 11 48999999999999999986
Q ss_pred HHHHhCcCCCCCCEEecChhhHHHHHHHHHHHHhcCCC---------cCceeEEEcC-CCCeeeecCCeEEEEE-EcCCC
Q 018507 135 YVASRGLYNLKPPTIFVPPSIKEDVEKLFEIHRSLGNV---------ELNLDLVALD-VGETYEMRNDIVVRPF-KTHHV 203 (355)
Q Consensus 135 l~~~~~~~~~~~~~Iy~~~~~~~~l~~~~~~~~~~~~~---------~~~~~~~~l~-~g~~~~i~~g~~v~~~-~~~H~ 203 (355)
+ ...+||+++...+.+............. ....++..++ .++.+++++++++..+ | +|+
T Consensus 123 ~---------~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~v~~~~p-gHt 192 (276)
T 2r2d_A 123 F---------GKSRLIAHEDEFATAVRYFATGDHSSPYIVKDIEAWLATPRNWDLVGRDERERELAPGVNLLNFGT-GHA 192 (276)
T ss_dssp C---------SSSEEEEEHHHHHHHHHHHHTTCCSSSSCHHHHHHHTTSCCCEEEECTTCCEEEEETTEEEEEEES-SSS
T ss_pred C---------CCCEEEECHHHHHHHhccccccccccccchHHhhhhccccccceeccCCCceeEecCCEEEEeCCC-CCC
Confidence 5 2367999998887775543210000000 0123566776 4788888657999998 7 999
Q ss_pred CCCeEEEEEEc
Q 018507 204 IPSQGYVIYLL 214 (355)
Q Consensus 204 ~~~~g~~i~~~ 214 (355)
.++++|+++.+
T Consensus 193 ~g~~~~~~~~~ 203 (276)
T 2r2d_A 193 SGMLGLAVRLE 203 (276)
T ss_dssp SSEEEEEEECS
T ss_pred ceeEEEEEEcC
Confidence 99999999743
No 33
>1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A*
Probab=99.37 E-value=3e-12 Score=123.77 Aligned_cols=107 Identities=10% Similarity=0.224 Sum_probs=80.9
Q ss_pred ceEEEEe-CCcEEEEecCCCCcc------------ccccCEEEeccCCccccCChHHHHHHhCcCCCCCCEEecChhhHH
Q 018507 91 HETCVII-PELKCAFDIGRCPTR------------AIQQNFVFITHGHLDHIGGLPMYVASRGLYNLKPPTIFVPPSIKE 157 (355)
Q Consensus 91 ~~s~~~i-~~~~iLID~G~~~~~------------~~~id~I~lTH~H~DHi~GL~~l~~~~~~~~~~~~~Iy~~~~~~~ 157 (355)
..+|+++ ++..+|||+|..... ..+|++||+||.|.||++|+..+...+ ...+||+++.+.+
T Consensus 35 ~~n~~li~~~~~iliD~g~~~~~~~~~~~l~~~~~~~~i~~iiiTH~H~DH~gg~~~l~~~~-----~~~~v~~~~~~~~ 109 (398)
T 1ycg_A 35 TYNAYLIVDDKTALVDTVYEPFKEELIAKLKQIKDPVKLDYLVVNHTESDHAGAFPAIMELC-----PDAHVLCTQRAFD 109 (398)
T ss_dssp EECCEEECSSSCEEECCCCGGGHHHHHHHHHHHCSSCCCSEEEESCCSHHHHTTHHHHHHHC-----TTCEEEECHHHHH
T ss_pred eEEEEEEECCCEEEEeCCCcccHHHHHHHHHHhcCcccCCEEEeCCCCcchhhhHHHHHHHC-----CCCEEEEcHHHHH
Confidence 3456666 456899999986210 126899999999999999999987532 2467999999888
Q ss_pred HHHHHHHHHHhcCCCcCceeEEEcCCCCeeeecCCeEEEEEEcC--CCCCCeEEEE
Q 018507 158 DVEKLFEIHRSLGNVELNLDLVALDVGETYEMRNDIVVRPFKTH--HVIPSQGYVI 211 (355)
Q Consensus 158 ~l~~~~~~~~~~~~~~~~~~~~~l~~g~~~~i~~g~~v~~~~~~--H~~~~~g~~i 211 (355)
.++..+ +. ....++.+.+|+.+.++ +.+++++++. |+.+++++.+
T Consensus 110 ~l~~~~------~~--~~~~~~~~~~g~~~~~g-~~~~~~~~~p~gH~~~~~~~~~ 156 (398)
T 1ycg_A 110 SLKAHY------SH--IDFNYTIVKTGTSVSLG-KRSLTFIEAPMLHWPDSMFTYV 156 (398)
T ss_dssp HHHHHT------CS--CCCEEEECCTTCEEECS-SCEEEEEECTTSSSTTCEEEEE
T ss_pred HHHHHh------CC--CCcceEEeCCCCEEeeC-CcEEEEEeCCCCCCCCcEEEEE
Confidence 776542 11 12466788899999996 8999999875 8899988776
No 34
>3hnn_A Putative diflavin flavoprotein A 5; PSI-2, protein structure initiative, northeast structural GE consortium, NESG, NSR435A, DFA5, electron transport; 1.80A {Nostoc SP} PDB: 4fek_A
Probab=99.35 E-value=1.2e-12 Score=119.85 Aligned_cols=107 Identities=12% Similarity=0.099 Sum_probs=79.6
Q ss_pred eEEEEe-CCcEEEEecCCCCc-----c-------ccccCEEEeccCCccccCChHHHHHHhCcCCCCCCEEecChhhHHH
Q 018507 92 ETCVII-PELKCAFDIGRCPT-----R-------AIQQNFVFITHGHLDHIGGLPMYVASRGLYNLKPPTIFVPPSIKED 158 (355)
Q Consensus 92 ~s~~~i-~~~~iLID~G~~~~-----~-------~~~id~I~lTH~H~DHi~GL~~l~~~~~~~~~~~~~Iy~~~~~~~~ 158 (355)
.+|+++ ++..+|||+|.... . ..+|++||+||.|.||++|+..+.... ...+||+++.+.+.
T Consensus 43 ~N~yli~~~~~iLID~G~~~~~~~~~~~l~~~~~~~~i~~IilTH~H~DH~gg~~~l~~~~-----~~~~v~~~~~~~~~ 117 (262)
T 3hnn_A 43 SNSYVIEGDKTAIIDPPVESFMKIYLEALQQTVNLKKLDYVILGHFSPNRIPTFKALLELA-----PQITFVCSLPAAGD 117 (262)
T ss_dssp EEEEEEESSSEEEECCCCHHHHHHHHHHHHHHSCGGGEEEEECSSCCGGGHHHHHHHHHHC-----TTCEEEECHHHHHH
T ss_pred EEEEEEECCCEEEEECCCcchHHHHHHHHHHhCChhhCCEEEECCCCcchhchHHHHHHHC-----CCCEEEECHHHHHH
Confidence 456666 56789999997521 0 126999999999999999999987532 24679999998887
Q ss_pred HHHHHHHHHhcCCCcCceeEEEcCCCCeeeecCCeEEEEEEc-C-CCCCCeEEEE
Q 018507 159 VEKLFEIHRSLGNVELNLDLVALDVGETYEMRNDIVVRPFKT-H-HVIPSQGYVI 211 (355)
Q Consensus 159 l~~~~~~~~~~~~~~~~~~~~~l~~g~~~~i~~g~~v~~~~~-~-H~~~~~g~~i 211 (355)
++..+ .. .....+.++.|+.+.++++.+++++++ + |+++++.+.+
T Consensus 118 l~~~~------~~--~~~~~~~~~~g~~l~lg~~~~~~~i~tpg~Ht~g~~~~~~ 164 (262)
T 3hnn_A 118 LRAAF------PD--DNLNILPMRGKETLDLGKGHVLKFLPIPSPRWPAGLCTYD 164 (262)
T ss_dssp HHHHS------SS--SCCEEEECCSSCEEECSTTCEEEEEECCCSSCTTCEEEEE
T ss_pred HHHHh------CC--CCCceEEeCCCCEEEcCCCcEEEEEECCCCCCCCeeEEEe
Confidence 76532 11 124677888999999954778888877 4 8888887765
No 35
>1a7t_A Metallo-beta-lactamase; hydrolase (beta-lactamase), zinc; HET: MES; 1.85A {Bacteroides fragilis} SCOP: d.157.1.1 PDB: 1a8t_A* 2bmi_A 1kr3_A 1znb_A 2znb_A 3znb_A 4znb_A 1hlk_A*
Probab=99.35 E-value=1.5e-11 Score=110.11 Aligned_cols=103 Identities=13% Similarity=0.074 Sum_probs=77.0
Q ss_pred eEEEEe--CCcEEEEecCCCCcc------------ccccCEEEeccCCccccCChHHHHHHhCcCCCCCCEEecChhhHH
Q 018507 92 ETCVII--PELKCAFDIGRCPTR------------AIQQNFVFITHGHLDHIGGLPMYVASRGLYNLKPPTIFVPPSIKE 157 (355)
Q Consensus 92 ~s~~~i--~~~~iLID~G~~~~~------------~~~id~I~lTH~H~DHi~GL~~l~~~~~~~~~~~~~Iy~~~~~~~ 157 (355)
.+|+++ ++..+|||+|.+... ..+|++||+||.|.||++|+..+.. ..++||+++.+.+
T Consensus 37 ~n~~li~~~~~~iLiD~G~~~~~~~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~~~~-------~~~~v~~~~~~~~ 109 (232)
T 1a7t_A 37 SNGMIVINNHQAALLDTPINDAQTEMLVNWVTDSLHAKVTTFIPNHWHGDCIGGLGYLQR-------KGVQSYANQMTID 109 (232)
T ss_dssp EEEEEEEETTEEEEESCCSSHHHHHHHHHHHHHHHCCEEEEEECSSSSHHHHTTHHHHHH-------TTCEEEEEHHHHH
T ss_pred ceEEEEEeCCEEEEEeCCCCHHHHHHHHHHHHHhcCCCeEEEEeCCCCccccCCHHHHHh-------CCCeEEEcHHHHH
Confidence 556666 456899999976210 1268999999999999999998864 1467999998877
Q ss_pred HHHHHHHHHHhcCCCcCceeEEEcCCCCeeeecCCeEEEEEE-c-CCCCCCeEEEEE
Q 018507 158 DVEKLFEIHRSLGNVELNLDLVALDVGETYEMRNDIVVRPFK-T-HHVIPSQGYVIY 212 (355)
Q Consensus 158 ~l~~~~~~~~~~~~~~~~~~~~~l~~g~~~~i~~g~~v~~~~-~-~H~~~~~g~~i~ 212 (355)
.++.. .+ ......+..++.+.++ +.+++++. + +|+.++++|.+.
T Consensus 110 ~~~~~-----~~-----~~~~~~~~~g~~~~~g-~~~i~~~~~~pgHt~g~~~~~~~ 155 (232)
T 1a7t_A 110 LAKEK-----GL-----PVPEHGFTDSLTVSLD-GMPLQCYYLGGGHATDNIVVWLP 155 (232)
T ss_dssp HHHHH-----TC-----CCCSEEESSEEEEEET-TEEEEEECCCCSSSTTCCEEEET
T ss_pred HHHhc-----CC-----CCCceecCCCCEEEEC-CeEEEEEeCCCCCCCCCEEEEEC
Confidence 76542 11 1123456778889996 89999995 5 999999999874
No 36
>2zwr_A Metallo-beta-lactamase superfamily protein; hydrolase; 2.20A {Thermus thermophilus} PDB: 2zzi_A
Probab=99.35 E-value=6.6e-12 Score=110.55 Aligned_cols=111 Identities=18% Similarity=0.210 Sum_probs=73.4
Q ss_pred ceEEEEe--CCcEEEEecCCCCccc--------cccCEEEeccCCccccCChHHHHHHhCcCCCCCCEEecChhhHHHHH
Q 018507 91 HETCVII--PELKCAFDIGRCPTRA--------IQQNFVFITHGHLDHIGGLPMYVASRGLYNLKPPTIFVPPSIKEDVE 160 (355)
Q Consensus 91 ~~s~~~i--~~~~iLID~G~~~~~~--------~~id~I~lTH~H~DHi~GL~~l~~~~~~~~~~~~~Iy~~~~~~~~l~ 160 (355)
..+|+++ ++..+|||+|.+.... .+|++||+||.|.||++|+..+.... ..+||+++...+.++
T Consensus 12 ~~n~~li~~~~~~iliD~G~~~~~l~~~l~~~g~~i~~vilTH~H~DH~gg~~~l~~~~------~~~v~~~~~~~~~~~ 85 (207)
T 2zwr_A 12 QENAYLVETGEGPVLIDPGDEPEKLLALFQTTGLIPLAILLTHAHFDHVGAVAPLVEAL------DLPVYLHPLDLPLYE 85 (207)
T ss_dssp TEEEEEEEETTEEEEECCCSCHHHHHHHHHHHTCCCSCEECSCCCGGGTTTHHHHHHHH------CCCEEECGGGHHHHH
T ss_pred ccEEEEEEeCCcEEEEeCCCCHHHHHHHHHHcCCcccEEEECCCChHHHccHHHHHHHh------CCcEEECHHHHHHHh
Confidence 4556776 4568999999764321 25999999999999999999886532 256999999988886
Q ss_pred HHHHHHHhcCCC--cCceeEEEcCCCCeeeecCCeEEEEEEc-CCCCCCeEEEEE
Q 018507 161 KLFEIHRSLGNV--ELNLDLVALDVGETYEMRNDIVVRPFKT-HHVIPSQGYVIY 212 (355)
Q Consensus 161 ~~~~~~~~~~~~--~~~~~~~~l~~g~~~~i~~g~~v~~~~~-~H~~~~~g~~i~ 212 (355)
........++.. ......+.+.+|+.+. + ++++++ +|+.++++|.++
T Consensus 86 ~~~~~~~~~g~~~~~~~~~~~~~~~g~~i~---~--~~~~~~pGHt~g~~~~~~~ 135 (207)
T 2zwr_A 86 GADLAARAWGLAIPKPPLPVRPLEEGMRLF---G--FQVLHLPGHSPGHVAFYDP 135 (207)
T ss_dssp THHHHHHHTTCCCCCCCSCCEECCTTCEET---T--EEEEECCSSSTTCEEEEET
T ss_pred CchhhhhhcCCCCCcCCCCceEeCCCCEEE---E--EEEEeCCCCCCCcEEEEEC
Confidence 543211111110 0000234566676553 4 444555 699999999984
No 37
>1k07_A FEZ-1 beta-lactamase; monomer with alpha-beta/BETA-alpha fold. two monomers PER AS UNIT., hydrolase; HET: GOL; 1.65A {Fluoribacter gormanii} SCOP: d.157.1.1 PDB: 1jt1_A* 1l9y_A
Probab=99.35 E-value=2.4e-12 Score=117.55 Aligned_cols=116 Identities=16% Similarity=0.138 Sum_probs=81.1
Q ss_pred ceEEEEe--CCcEEEEecCCCCcc-----c-----c---ccCEEEeccCCccccCChHHHHHHhCcCCCCCCEEecChhh
Q 018507 91 HETCVII--PELKCAFDIGRCPTR-----A-----I---QQNFVFITHGHLDHIGGLPMYVASRGLYNLKPPTIFVPPSI 155 (355)
Q Consensus 91 ~~s~~~i--~~~~iLID~G~~~~~-----~-----~---~id~I~lTH~H~DHi~GL~~l~~~~~~~~~~~~~Iy~~~~~ 155 (355)
+.+|+++ ++..+|||+|.+... . + +|++||+||.|+||++|+..+.... .++||+++..
T Consensus 24 ~~n~~li~~~~~~iLID~G~~~~~~~l~~~l~~~g~~~~~i~~IilTH~H~DH~gg~~~l~~~~------~~~v~~~~~~ 97 (263)
T 1k07_A 24 DLASYLIVTPRGNILINSDLEANVPMIKASIKKLGFKFSDTKILLISHAHFDHAAGSELIKQQT------KAKYMVMDED 97 (263)
T ss_dssp SBCCEEEEETTEEEEECCCCGGGHHHHHHHHHHTTCCGGGEEEEECSSSSHHHHTTHHHHHHHH------CCEEEEEHHH
T ss_pred CeEEEEEEeCCceEEEECCCcccHHHHHHHHHHcCCCHHHCcEEEeCCCCccccccHHHHHHhc------CCEEEEcHHH
Confidence 4456666 457899999975211 0 1 4899999999999999999887532 3579999988
Q ss_pred HHHHHHHHHHHHhcCC-----CcCceeEEEcCCCCeeeecCCeEEEEEEc-CCCCCCeEEEEEE
Q 018507 156 KEDVEKLFEIHRSLGN-----VELNLDLVALDVGETYEMRNDIVVRPFKT-HHVIPSQGYVIYL 213 (355)
Q Consensus 156 ~~~l~~~~~~~~~~~~-----~~~~~~~~~l~~g~~~~i~~g~~v~~~~~-~H~~~~~g~~i~~ 213 (355)
.+.+.........++. .........+.+++.+.++ +++++++++ +|+.++++|+++.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g-~~~i~~i~~pGHt~g~~~~~~~~ 160 (263)
T 1k07_A 98 VSVILSGGKSDFHYANDSSTYFTQSTVDKVLHDGERVELG-GTVLTAHLTPGHTRGCTTWTMKL 160 (263)
T ss_dssp HHHHHTTTTTCTTTTTCGGGCCCCCCCSEEECTTCEEEET-TEEEEEEECCSSSTTCEEEEEEE
T ss_pred HHHHhcccccccccCccccccCCCCCcceEeCCCCEEEEC-CeEEEEEECCCCCCCcEEEEEec
Confidence 8877542110000110 0011134567889999996 999999988 7999999999975
No 38
>3m8t_A 'BLR6230 protein; subclass B3 beta-lactamase, zinc enzyme, sulfonamide complex hydrolase-hydrolase inhibitor complex; HET: 4NZ; 1.33A {Bradyrhizobium japonicum} PDB: 3lvz_A* 2gmn_A
Probab=99.34 E-value=3e-12 Score=118.49 Aligned_cols=116 Identities=15% Similarity=0.125 Sum_probs=81.0
Q ss_pred eEEEEe--CCcEEEEecCCCCcc-----c-----c---ccCEEEeccCCccccCChHHHHHHhCcCCCCCCEEecChhhH
Q 018507 92 ETCVII--PELKCAFDIGRCPTR-----A-----I---QQNFVFITHGHLDHIGGLPMYVASRGLYNLKPPTIFVPPSIK 156 (355)
Q Consensus 92 ~s~~~i--~~~~iLID~G~~~~~-----~-----~---~id~I~lTH~H~DHi~GL~~l~~~~~~~~~~~~~Iy~~~~~~ 156 (355)
.+|+++ ++..+|||+|..... . + +|++||+||.|.||++|+..+.... .++||+++.+.
T Consensus 55 ~n~~li~~~~~~iLID~G~~~~~~~~~~~l~~~g~~~~~i~~ii~TH~H~DH~gg~~~l~~~~------~~~v~~~~~~~ 128 (294)
T 3m8t_A 55 IAVYVIKTSQGLILMDTAMPQSTGMIKDNIAKLGFKVADIKLILNTHAHLDHTGGFAEIKKET------GAQLVAGERDK 128 (294)
T ss_dssp SCCEEEEETTEEEEECCCCGGGHHHHHHHHHHTTCCGGGEEEEECSCCCHHHHTTHHHHHHHH------CCEEEEEGGGH
T ss_pred eEEEEEEECCceEEEECCCchhHHHHHHHHHHcCCCHHHCcEEEECCCCccccccHHHHhhcc------CCEEEEChHHH
Confidence 445555 567899999974211 0 1 4899999999999999999987532 35799999998
Q ss_pred HHHHHHHHHHHhcC---CCcCceeEEEcCCCCeeeecCCeEEEEEEc-CCCCCCeEEEEEEc
Q 018507 157 EDVEKLFEIHRSLG---NVELNLDLVALDVGETYEMRNDIVVRPFKT-HHVIPSQGYVIYLL 214 (355)
Q Consensus 157 ~~l~~~~~~~~~~~---~~~~~~~~~~l~~g~~~~i~~g~~v~~~~~-~H~~~~~g~~i~~~ 214 (355)
+.++.......... ........+.+..|+.+.++ +++|+++++ +|+.++++|+++..
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g-~~~i~~~~~pgHt~g~~~~~~~~~ 189 (294)
T 3m8t_A 129 PLLEGGYYPGDEKNEDLAFPAVKVDRAVKEGDRVTLG-DTTLTAHATPGHSPGCTSWEMTVK 189 (294)
T ss_dssp HHHHHTCBTTBTTCGGGCCCCCCCSEEECTTCEEEET-TEEEEEEECCSSSTTCEEEEEEEE
T ss_pred HHHhcccccCccccccCCCCCCCCceEeCCCCEEEeC-CEEEEEEeCCCCCccCEEEEEEcc
Confidence 88765311000000 00011123567889999996 999999997 69999999999754
No 39
>2zo4_A Metallo-beta-lactamase family protein; hydrolase; 2.10A {Thermus thermophilus}
Probab=99.34 E-value=6.6e-12 Score=117.59 Aligned_cols=173 Identities=14% Similarity=0.150 Sum_probs=111.8
Q ss_pred CceEEEEe--CCcEEEEecCCCCcc-------c-----c---ccCEEEeccCCccccCChHHHHHHhCcCCCCCCEEecC
Q 018507 90 GHETCVII--PELKCAFDIGRCPTR-------A-----I---QQNFVFITHGHLDHIGGLPMYVASRGLYNLKPPTIFVP 152 (355)
Q Consensus 90 ~~~s~~~i--~~~~iLID~G~~~~~-------~-----~---~id~I~lTH~H~DHi~GL~~l~~~~~~~~~~~~~Iy~~ 152 (355)
+..+|+++ ++..+|||+|.+... . . +|++||+||.|.||++|+..+... ..+||++
T Consensus 20 ~~~n~~li~~~~~~ilID~G~~~~~~~~~l~~~l~~~g~~~~~i~~Vi~TH~H~DH~gg~~~l~~~-------~~~v~~~ 92 (317)
T 2zo4_A 20 KTVNLYLLQGAGEVALVDTALGTRAARGALELHLAELGLCFQDVKTILLTHHHPDHYGLSGFFEGL-------GARVFLH 92 (317)
T ss_dssp CEEEEEEEEETTEEEEECCCCSSHHHHHHHHHHHHHTTCCGGGCCEEEESCCSHHHHTTHHHHHHT-------TCEEEEE
T ss_pred CcEEEEEEEcCCceEEEECCCCCHHHHHHHHHHHHHcCCChhhcCEEEEcCCCCcccccHHHHHhC-------CCEEEEc
Confidence 44667777 346899999987631 1 1 389999999999999999988641 4679999
Q ss_pred hhhHHHHHHHHH-----------HHHhcC--C----------------CcCceeEEEcCCCCeeeecCCeEEEEEEc-CC
Q 018507 153 PSIKEDVEKLFE-----------IHRSLG--N----------------VELNLDLVALDVGETYEMRNDIVVRPFKT-HH 202 (355)
Q Consensus 153 ~~~~~~l~~~~~-----------~~~~~~--~----------------~~~~~~~~~l~~g~~~~i~~g~~v~~~~~-~H 202 (355)
+...+.++.... .+...+ . .........+.+|+.+.++ |.+++++.+ +|
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~g-g~~~~~i~tpGH 171 (317)
T 2zo4_A 93 EEEFARGHRFWREPEAFAEASWRLFLDHGTPEGALQGIRETVEKTRERVHPPQNPLPLRDGEALEVA-GKRLRVLWTPGH 171 (317)
T ss_dssp GGGTTTHHHHHHCTTTSHHHHHHHHHHTTCCC-------CHHHHHHTTCCCCSSCEEECTTCEEEET-TEEEEEEECCSS
T ss_pred HHHHHHHHhhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHhcccccccCCCCCCceEECCCCEEEeC-CceEEEEECCCC
Confidence 888776654321 000000 0 0011245677889999996 999999999 79
Q ss_pred CCCCeEEEEEEcchhhhhhhcccchHHHHHHHhcCceecceeeCCeEEEEcCCCCCccCCccccccCCCCEEEEecccCC
Q 018507 203 VIPSQGYVIYLLRKKLKKQYIHLKGKQIEKLKKSGVEITDIILSPEVAFTGDTTSEFMLNPRNADALRAKILITEATFLD 282 (355)
Q Consensus 203 ~~~~~g~~i~~~~~~l~~~~~~~~~~~~~~Lk~~G~~i~~~~~~~~i~y~gDt~~~~~~~~~~~~~~~~d~Li~e~t~~~ 282 (355)
+.++++|.+.. .+++|+||+....... +.... ...+.+
T Consensus 172 t~g~~~~~~~~---------------------------------~~~lf~GD~~~~~~~~-------~~~~~--~~~~~~ 209 (317)
T 2zo4_A 172 ADGHAAFYLEE---------------------------------EGVLLAGDALLEKVSP-------NVGLW--AYTREN 209 (317)
T ss_dssp STTCEEEEETT---------------------------------TTEEEEETSCCSSSCC-------CCCCC--TTSCSC
T ss_pred CcccEEEEeCC---------------------------------CCEEEECCEecCCCCC-------CCccc--CCCCCc
Confidence 99999997631 1599999997522110 00000 000111
Q ss_pred CcccHHHHhhcCCCcHHHHHHHHHHcCCCeEEEEecCCCCC
Q 018507 283 DEMSIEHAQQHGHTHLSEIIENAKWIRNKAVLLTHFSSRYH 323 (355)
Q Consensus 283 ~~~~~~~a~~~~H~~~~~a~~~~~~~~~k~~vltH~s~~~~ 323 (355)
. . . .+.++++.+..++++.++..|-.....
T Consensus 210 -~----~-~-----~~~~sl~~l~~l~~~~v~pgHg~~~~~ 239 (317)
T 2zo4_A 210 -P----L-K-----DFLRSLDRLADLGARVAYAGHFGPIAD 239 (317)
T ss_dssp -H----H-H-----HHHHHHHHHHTSCCSEEEESSSSCBSC
T ss_pred -h----H-H-----HHHHHHHHHhcCCCCEEECCCCCccCC
Confidence 1 0 0 145667777778888999999877654
No 40
>4efz_A Metallo-beta-lactamase family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.60A {Burkholderia pseudomallei}
Probab=99.33 E-value=1.2e-11 Score=115.38 Aligned_cols=126 Identities=17% Similarity=0.160 Sum_probs=86.0
Q ss_pred eEEEEEee-cCceEEEEe-C---CcEEEEecCCCCc------------c--------ccccCEEEeccCCccccCChHHH
Q 018507 81 YTIEGVSI-GGHETCVII-P---ELKCAFDIGRCPT------------R--------AIQQNFVFITHGHLDHIGGLPMY 135 (355)
Q Consensus 81 ~~i~~~~~-g~~~s~~~i-~---~~~iLID~G~~~~------------~--------~~~id~I~lTH~H~DHi~GL~~l 135 (355)
+.|...-. +..++|+++ + +..+|||+|.+.. . .++|++||+||.|+||++|+..|
T Consensus 5 m~i~~~~~~~~~~~~yli~~~~~~~~ilID~g~~~~~~~~~~~~~~~~~l~~~l~~~g~~i~~Il~TH~H~DH~gg~~~l 84 (298)
T 4efz_A 5 MTVEGFFDPATCTISYLLFDSGSGECALIDSVLDYDPKSGRTRTASADQLIARVAALGARVRWLLETHVHADHLSAAPYL 84 (298)
T ss_dssp CEEEEEECTTTCBEEEEEECTTTCEEEEESCCBEEETTTTEEECHHHHHHHHHHHHHTCEEEEEECSSCCSSSBCCHHHH
T ss_pred eEEEEEecCCcccEEEEEEECCCCeEEEEcCCCCccccccccCcccHHHHHHHHHHCCCcceEEEECCCchhhhhhHHHH
Confidence 34443333 344566776 2 3589999996421 0 12699999999999999999998
Q ss_pred HHHhCcCCCCCCEEecChhhHHHHHHHHHHHHhcCC---CcCceeEEEcCCCCeeeecCCeEEEEEEc-CCCCCCeEEEE
Q 018507 136 VASRGLYNLKPPTIFVPPSIKEDVEKLFEIHRSLGN---VELNLDLVALDVGETYEMRNDIVVRPFKT-HHVIPSQGYVI 211 (355)
Q Consensus 136 ~~~~~~~~~~~~~Iy~~~~~~~~l~~~~~~~~~~~~---~~~~~~~~~l~~g~~~~i~~g~~v~~~~~-~H~~~~~g~~i 211 (355)
.... ..+||+++...+.++.....+. ... .......+.+.+|+.+.++ +++++++.+ +|+.++++|++
T Consensus 85 ~~~~------~a~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~l~~g-~~~i~vi~tPGHT~g~~~~~~ 156 (298)
T 4efz_A 85 KTRV------GGEIAIGRHVTRVQDVFGKLFN-AGPAFAHDGSQFDRLLDDGDTLALG-ALSIRAMHTPGHTPACMTYVV 156 (298)
T ss_dssp HHHH------CCEEEEETTHHHHHHHHHHHTT-CCTTSCSSSTTSSEEECTTCEEEET-TEEEEEEECCSSSTTCEEEEE
T ss_pred HHHh------CCcEEEChhHHHHHHHHHHhcC-CcccccccccCCCEEeCCCCEEEEC-CEEEEEEECCCCCcccEEEEE
Confidence 7643 2569999887776654322221 111 0000112567889999996 999999999 79999999999
Q ss_pred EEc
Q 018507 212 YLL 214 (355)
Q Consensus 212 ~~~ 214 (355)
...
T Consensus 157 ~~~ 159 (298)
T 4efz_A 157 TEA 159 (298)
T ss_dssp EET
T ss_pred CCC
Confidence 864
No 41
>1m2x_A Class B carbapenemase BLAB-1; alpha-beta/BETA-alpha fold., hydrolase; HET: MCO; 1.50A {Elizabethkingia meningoseptica} SCOP: d.157.1.1
Probab=99.32 E-value=3e-11 Score=107.46 Aligned_cols=103 Identities=12% Similarity=0.079 Sum_probs=76.6
Q ss_pred eEEEEe--CCcEEEEecCCCCcc------------ccccCEEEeccCCccccCChHHHHHHhCcCCCCCCEEecChhhHH
Q 018507 92 ETCVII--PELKCAFDIGRCPTR------------AIQQNFVFITHGHLDHIGGLPMYVASRGLYNLKPPTIFVPPSIKE 157 (355)
Q Consensus 92 ~s~~~i--~~~~iLID~G~~~~~------------~~~id~I~lTH~H~DHi~GL~~l~~~~~~~~~~~~~Iy~~~~~~~ 157 (355)
.+|+++ ++..+|||+|.+... ..+|++||+||.|.||++|+..+.. ..++||+++.+.+
T Consensus 27 ~n~~li~~~~~~iLiD~G~~~~~~~~~~~~l~~~~g~~i~~vi~TH~H~DH~gg~~~~~~-------~~~~v~~~~~~~~ 99 (223)
T 1m2x_A 27 ANAVYLVTDKGVVVIDCPWGEDKFKSFTDEIYKKHGKKVIMNIATHSHDDRAGGLEYFGK-------IGAKTYSTKMTDS 99 (223)
T ss_dssp EEEEEEEETTEEEEESCCSSGGGHHHHHHHHHHHHCCCEEEEECSSSSTTTTTTHHHHHH-------TTCEEEEEHHHHH
T ss_pred ccEEEEEeCCEEEEEeCCCChhHHHHHHHHHHHHhCCCeEEEEeccCCccccCchhhHhh-------CCCeEEEcHHHHH
Confidence 456666 467899999975310 1368999999999999999998864 1467999998877
Q ss_pred HHHHHHHHHHhcCCCcCceeEEEcCCCCeeeecCCeEEEEEE-c-CCCCCCeEEEEE
Q 018507 158 DVEKLFEIHRSLGNVELNLDLVALDVGETYEMRNDIVVRPFK-T-HHVIPSQGYVIY 212 (355)
Q Consensus 158 ~l~~~~~~~~~~~~~~~~~~~~~l~~g~~~~i~~g~~v~~~~-~-~H~~~~~g~~i~ 212 (355)
.++... . ......+..++.+.++ +.+++++. + +|+.++++|.+.
T Consensus 100 ~~~~~~-----~-----~~~~~~~~~g~~~~~g-~~~i~~~~~~pgHt~~~~~~~~~ 145 (223)
T 1m2x_A 100 ILAKEN-----K-----PRAQYTFDNNKSFKVG-KSEFQVYYPGKGHTADNVVVWFP 145 (223)
T ss_dssp HHHHTT-----C-----CCCSEEESSCEEEEET-TEEEEEECCCSSSSSSCCEEEET
T ss_pred HHHhcC-----c-----cCCceecCCCceEEEC-CEEEEEEecCCCCCCCCEEEEEC
Confidence 665421 1 1122556788889996 89999994 5 899999999874
No 42
>4ad9_A Lactb2, beta-lactamase-like protein 2; hydrolase, metallo-beta lactamase, mitochondria; 2.60A {Homo sapiens}
Probab=99.29 E-value=3.7e-11 Score=111.18 Aligned_cols=111 Identities=17% Similarity=0.148 Sum_probs=78.7
Q ss_pred CceEEEEe--CCcEEEEecCCCCcc-------------ccccCEEEeccCCccccCChHHHHHHhCcCCCCCCEEecChh
Q 018507 90 GHETCVII--PELKCAFDIGRCPTR-------------AIQQNFVFITHGHLDHIGGLPMYVASRGLYNLKPPTIFVPPS 154 (355)
Q Consensus 90 ~~~s~~~i--~~~~iLID~G~~~~~-------------~~~id~I~lTH~H~DHi~GL~~l~~~~~~~~~~~~~Iy~~~~ 154 (355)
...+|+++ ++..+|||+|..... ..+|++||+||.|.||++|+..+...... ...+++|+.+.
T Consensus 30 ~~~n~~li~~~~~~ilID~G~~~~~~~~~~l~~~l~~~~~~i~~Ii~TH~H~DH~gg~~~l~~~~~~--~~~~~v~~~~~ 107 (289)
T 4ad9_A 30 QGTNTYLVGTGPRRILIDTGEPAIPEYISCLKQALTEFNTAIQEIVVTHWHRDHSGGIGDICKSINN--DTTYCIKKLPR 107 (289)
T ss_dssp TCCEEEEECSSSSEEEECCCSTTCHHHHHHHHHHHHHTTCCEEEEECSCSSHHHHTTHHHHHHHSCC--SSCCCEEECCC
T ss_pred CceEEEEEecCCceEEEeCCCCCChHHHHHHHHHHHHcCCCceEEEEcCCCCcccccHHHHHHhhcc--CCCceEEecCC
Confidence 34667777 356899999965321 12699999999999999999999764311 23456787653
Q ss_pred hHHHHHHHHHHHHhcCCCcCceeEEEcCCCCeeeecCCeEEEEEEc-CCCCCCeEEEEE
Q 018507 155 IKEDVEKLFEIHRSLGNVELNLDLVALDVGETYEMRNDIVVRPFKT-HHVIPSQGYVIY 212 (355)
Q Consensus 155 ~~~~l~~~~~~~~~~~~~~~~~~~~~l~~g~~~~i~~g~~v~~~~~-~H~~~~~g~~i~ 212 (355)
..... ..+. .....+..+.+|+.+.++ |.+++++.+ +|+.++++|.+.
T Consensus 108 ~~~~~-------~~~~--~~~~~~~~~~~g~~~~~g-g~~~~~~~~pGHt~~~~~~~~~ 156 (289)
T 4ad9_A 108 NPQRE-------EIIG--NGEQQYVYLKDGDVIKTE-GATLRVLYTPGHTDDHMALLLE 156 (289)
T ss_dssp SSCCC-------CCBT--TTTBCEEECCTTCEEEET-TEEEEEEECCSSSTTCEEEEET
T ss_pred Ccchh-------hhcc--CCCCceEEcCCCCEEEeC-CeEEEEEECCCCCCCCEEEEEc
Confidence 31000 0011 123467889999999996 999999999 999999999984
No 43
>3q6v_A Beta-lactamase; metalloenzyme, alpha-beta, hydrolase; 1.37A {Serratia fonticola} PDB: 3sd9_A
Probab=99.29 E-value=4.8e-11 Score=106.46 Aligned_cols=174 Identities=13% Similarity=0.064 Sum_probs=105.8
Q ss_pred eEEEEe--CCcEEEEecCCCCcc------------ccccCEEEeccCCccccCChHHHHHHhCcCCCCCCEEecChhhHH
Q 018507 92 ETCVII--PELKCAFDIGRCPTR------------AIQQNFVFITHGHLDHIGGLPMYVASRGLYNLKPPTIFVPPSIKE 157 (355)
Q Consensus 92 ~s~~~i--~~~~iLID~G~~~~~------------~~~id~I~lTH~H~DHi~GL~~l~~~~~~~~~~~~~Iy~~~~~~~ 157 (355)
.+|+++ ++..+|||+|.+... ..+|++||+||.|+||++|+..+.. ...+||+++.+.+
T Consensus 26 ~n~~li~~~~~~iLiD~G~~~~~~~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~~~~-------~~~~v~~~~~~~~ 98 (233)
T 3q6v_A 26 ENSMVYIGTDGITIIGATWTPETAETLYKEIRKVSPLPINEVINTNYHTDRAGGNAYWKT-------LGAKIVATQMTYD 98 (233)
T ss_dssp EEEEEEECSSCEEEESCCSSHHHHHHHHHHHHHHCCCCEEEEECSSSSHHHHTTHHHHHH-------TTCEEEEEHHHHH
T ss_pred CcEEEEEeCCeEEEEECCCCHHHHHHHHHHHHHhcCCCcEEEEECCCChhhhChHHHHhh-------CCCEEEEcHHHHH
Confidence 344555 457899999976421 1268999999999999999998863 2367999999988
Q ss_pred HHHHHHHHHH--------hcCCCcCceeEEEcCCCCeeeecCCeEEEEEEcCCCCCCeEEEEEEcchhhhhhhcccchHH
Q 018507 158 DVEKLFEIHR--------SLGNVELNLDLVALDVGETYEMRNDIVVRPFKTHHVIPSQGYVIYLLRKKLKKQYIHLKGKQ 229 (355)
Q Consensus 158 ~l~~~~~~~~--------~~~~~~~~~~~~~l~~g~~~~i~~g~~v~~~~~~H~~~~~g~~i~~~~~~l~~~~~~~~~~~ 229 (355)
.+++...... .+...........++.+..+..+ ++++...+.+|+.+++++.+...
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~v~~~~pGHt~g~~~~~~~~~--------------- 162 (233)
T 3q6v_A 99 LQKSQWGSIVNFTRQGNNKYPNLEKSLPDTVFPGDFNLQNG-SIRAMYLGEAHTKDGIFVYFPAE--------------- 162 (233)
T ss_dssp HHHHHHHHHHHHHHHHSTTCCCCCCCCCSEEESSCEEETTT-TEEEECCCCSSSSSCCEEEETTT---------------
T ss_pred HHHhhhHHHHHHHhccccccccccccCCCEEeCCCeEEcCc-eEEEEECCCCCCcCcEEEEeccC---------------
Confidence 8876433211 01100111122344555445432 55555544589999998887422
Q ss_pred HHHHHhcCceecceeeCCeEEEEcCCCCCccCCccccccCCCCEEEEecccCCCcccHHHHhhcCCCcHHHHHHHHHHc-
Q 018507 230 IEKLKKSGVEITDIILSPEVAFTGDTTSEFMLNPRNADALRAKILITEATFLDDEMSIEHAQQHGHTHLSEIIENAKWI- 308 (355)
Q Consensus 230 ~~~Lk~~G~~i~~~~~~~~i~y~gDt~~~~~~~~~~~~~~~~d~Li~e~t~~~~~~~~~~a~~~~H~~~~~a~~~~~~~- 308 (355)
+++| ||+-...... .. ... ....+.++++.++++
T Consensus 163 ------------------~~lf-gD~~~~~~~~----~~------------~~~----------~~~~~~~sl~~l~~l~ 197 (233)
T 3q6v_A 163 ------------------RVLY-GNCILKENLG----NM------------SFA----------NRTEYPKTLEKLKGLI 197 (233)
T ss_dssp ------------------TEEE-CTTTSCSSCC----CC------------TTC----------CTTHHHHHHHHHHHHH
T ss_pred ------------------CEEE-CceeccccCC----CC------------CcC----------CHHHHHHHHHHHHHhh
Confidence 5888 9986421100 00 001 122356677777777
Q ss_pred -----CCCeEEEEecCCCCChhHHHHHHHH
Q 018507 309 -----RNKAVLLTHFSSRYHIEDIRQAVLK 333 (355)
Q Consensus 309 -----~~k~~vltH~s~~~~~~~l~~~~~~ 333 (355)
+++.++..|-......+.++...+.
T Consensus 198 ~~~~~~~~~i~pgHg~~~~~~~~i~~~~~~ 227 (233)
T 3q6v_A 198 EQGELKVDSIIAGHDTPIHDVGLIDHYLTL 227 (233)
T ss_dssp HTTSSCCSEEECSSSSSEECTHHHHHHHHH
T ss_pred hcccCCCeEEECCCCCccCCHHHHHHHHHH
Confidence 8888888887765555555444443
No 44
>1xm8_A Glyoxalase II; structural genomics, protein structure initiative, CESG, AT2G31350, metallo-hydrolase, zinc/iron binuclear center; 1.74A {Arabidopsis thaliana} SCOP: d.157.1.2 PDB: 2q42_A
Probab=99.28 E-value=7.9e-12 Score=114.03 Aligned_cols=102 Identities=16% Similarity=0.128 Sum_probs=75.1
Q ss_pred cCceEEEEe-C---CcEEEEecCCCCc--c-----ccccCEEEeccCCccccCChHHHHHHhCcCCCCCCEEecChhhHH
Q 018507 89 GGHETCVII-P---ELKCAFDIGRCPT--R-----AIQQNFVFITHGHLDHIGGLPMYVASRGLYNLKPPTIFVPPSIKE 157 (355)
Q Consensus 89 g~~~s~~~i-~---~~~iLID~G~~~~--~-----~~~id~I~lTH~H~DHi~GL~~l~~~~~~~~~~~~~Iy~~~~~~~ 157 (355)
.+.++|+++ + +..+|||+|.... . ..+|++||+||.|+||++|+..+.... +.+||+++...+
T Consensus 9 ~~~n~~yli~~~~~~~~~lID~g~~~~i~~~l~~~g~~i~~Il~TH~H~DH~gg~~~l~~~~------~~~v~~~~~~~~ 82 (254)
T 1xm8_A 9 LKDNYAYILHDEDTGTVGVVDPSEAEPIIDSLKRSGRNLTYILNTHHHYDHTGGNLELKDRY------GAKVIGSAMDKD 82 (254)
T ss_dssp TTTEEEEEEECTTTCCEEEECCSSHHHHHHHHHHHTCCCCEEECSSCCHHHHTTHHHHHHHH------CCEEEEEGGGGG
T ss_pred cCCeEEEEEEECCCCEEEEEeCCCHHHHHHHHHHcCCCccEEEECCCCCcccccHHHHHHHc------CCeEEEchhhhh
Confidence 344556666 2 3589999994311 1 136999999999999999999987643 357999876543
Q ss_pred HHHHHHHHHHhcCCCcCceeEEEcCCCCeeeecCCeEEEEEEc-CCCCCCeEEEEE
Q 018507 158 DVEKLFEIHRSLGNVELNLDLVALDVGETYEMRNDIVVRPFKT-HHVIPSQGYVIY 212 (355)
Q Consensus 158 ~l~~~~~~~~~~~~~~~~~~~~~l~~g~~~~i~~g~~v~~~~~-~H~~~~~g~~i~ 212 (355)
.+ .. ....+.+|+.+.++ +.+++++.+ +|+.++++|++.
T Consensus 83 ~~----------~~-----~~~~~~~g~~~~lg-~~~~~vi~tPGHt~g~~~~~~~ 122 (254)
T 1xm8_A 83 RI----------PG-----IDMALKDGDKWMFA-GHEVHVMDTPGHTKGHISLYFP 122 (254)
T ss_dssp GS----------TT-----EEEEECTTCEEEET-TEEEEEEECCSSSSSCEEEEEG
T ss_pred cC----------CC-----CceeeCCCCEEEEC-CEEEEEEECCCCCCCcEEEEEC
Confidence 21 11 23567789999996 899999988 899999999984
No 45
>2qed_A Hydroxyacylglutathione hydrolase; metallo-B- superfamily, salmonella typhimurium LT2; 1.45A {Salmonella typhimurium} SCOP: d.157.1.2
Probab=99.28 E-value=1.6e-11 Score=112.33 Aligned_cols=108 Identities=17% Similarity=0.227 Sum_probs=79.5
Q ss_pred CeEEEEEeecCceEEEEe-C--CcEEEEecCCCCc--c-----ccccCEEEeccCCccccCChHHHHHHhCcCCCCCCEE
Q 018507 80 GYTIEGVSIGGHETCVII-P--ELKCAFDIGRCPT--R-----AIQQNFVFITHGHLDHIGGLPMYVASRGLYNLKPPTI 149 (355)
Q Consensus 80 ~~~i~~~~~g~~~s~~~i-~--~~~iLID~G~~~~--~-----~~~id~I~lTH~H~DHi~GL~~l~~~~~~~~~~~~~I 149 (355)
.+.|.....+..++|+++ + +..+|||+|.... . .++|++|++||.|+||++|+..+...+ ...+|
T Consensus 7 ~m~i~~i~~~~~n~~yli~~~~~~~vlID~G~~~~i~~~l~~~g~~i~~Il~TH~H~DH~gg~~~l~~~~-----~~~~v 81 (258)
T 2qed_A 7 SMNLNSIPAFQDNYIWVLTNDEGRCVIVDPGEAAPVLKAIAEHKWMPEAIFLTHHHHDHVGGVKELLQHF-----PQMTV 81 (258)
T ss_dssp CCEEEEEEETTTEEEEEEECTTSEEEEECCSCHHHHHHHHHHHTCEEEEEECCSCCHHHHTTHHHHHHHC-----TTCEE
T ss_pred ccEEEEecccCceEEEEEEECCCcEEEEeCCCcHHHHHHHHHcCCCCCEEEeCCCCccccCCHHHHHHHC-----CCCEE
Confidence 356666666666667776 3 4589999996411 1 126999999999999999999887532 22679
Q ss_pred ecChhhHHHHHHHHHHHHhcCCCcCceeEEEcCCCCeeeecCCeEEEEEEc-CCCCCCeEEE
Q 018507 150 FVPPSIKEDVEKLFEIHRSLGNVELNLDLVALDVGETYEMRNDIVVRPFKT-HHVIPSQGYV 210 (355)
Q Consensus 150 y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~g~~~~i~~g~~v~~~~~-~H~~~~~g~~ 210 (355)
|+++... +. ...+.+.+|+.+.++ +.+++++.+ +|+.++++|+
T Consensus 82 ~~~~~~~------------~~-----~~~~~~~~g~~~~~g-~~~~~vi~tPGHt~g~~~~~ 125 (258)
T 2qed_A 82 YGPAETQ------------DK-----GATHLVGDGDTIRVL-GEKFTLFATPGHTLGHVCYF 125 (258)
T ss_dssp EECGGGG------------GG-----TCSEECCTTCEEEET-TEEEEEEECCSSSTTCEEEE
T ss_pred Eeccccc------------CC-----CCcEEeCCCCEEEEC-CcEEEEEECCCCCCCCeEEE
Confidence 9987651 00 023567789999996 899999998 8999999998
No 46
>1qh5_A Glyoxalase II, protein (hydroxyacylglutathione hydrolase); metallo-hydrolase; HET: GSH GBP; 1.45A {Homo sapiens} SCOP: d.157.1.2 PDB: 1qh3_A*
Probab=99.28 E-value=1.4e-11 Score=112.74 Aligned_cols=105 Identities=16% Similarity=0.146 Sum_probs=76.2
Q ss_pred EEEEeecCceEEEEe-C---CcEEEEecCCCCc--c-----ccccCEEEeccCCccccCChHHHHHHhCcCCCCCCEEec
Q 018507 83 IEGVSIGGHETCVII-P---ELKCAFDIGRCPT--R-----AIQQNFVFITHGHLDHIGGLPMYVASRGLYNLKPPTIFV 151 (355)
Q Consensus 83 i~~~~~g~~~s~~~i-~---~~~iLID~G~~~~--~-----~~~id~I~lTH~H~DHi~GL~~l~~~~~~~~~~~~~Iy~ 151 (355)
|.....|...+|+++ + +..+|||+|.... . .++|++||+||.|+||++|+..+...+ ...+||+
T Consensus 3 i~~i~~~~~n~~yli~~~~~~~~vlID~G~~~~i~~~l~~~g~~i~~IllTH~H~DH~gg~~~l~~~~-----~~~~v~~ 77 (260)
T 1qh5_A 3 VEVLPALTDNYMYLVIDDETKEAAIVDPVQPQKVVDAARKHGVKLTTVLTTHHHWDHAGGNEKLVKLE-----SGLKVYG 77 (260)
T ss_dssp EEEEEETTTEEEEEEEETTTTEEEEESCSSHHHHHHHHHHHTCEEEEEECCCSSHHHHTTHHHHHHHS-----TTCEEEE
T ss_pred EEEEEecCceEEEEEEECCCCEEEEEcCCCHHHHHHHHHHcCCCccEEEeCCCCccccCCHHHHHHHC-----CCCEEEE
Confidence 444555655657776 2 3589999994311 1 126899999999999999999987632 2367999
Q ss_pred ChhhHHHHHHHHHHHHhcCCCcCceeEEEcCCCCeeeecCCeEEEEEEc-CCCCCCeEEEE
Q 018507 152 PPSIKEDVEKLFEIHRSLGNVELNLDLVALDVGETYEMRNDIVVRPFKT-HHVIPSQGYVI 211 (355)
Q Consensus 152 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~g~~~~i~~g~~v~~~~~-~H~~~~~g~~i 211 (355)
++... . .....+..|+.+.++ +++++++.+ +|+.++++|.+
T Consensus 78 ~~~~~-------------~-----~~~~~~~~g~~~~~g-~~~~~vi~tPGHt~g~~~~~~ 119 (260)
T 1qh5_A 78 GDDRI-------------G-----ALTHKITHLSTLQVG-SLNVKCLATPCHTSGHICYFV 119 (260)
T ss_dssp SCTTS-------------T-----TCSEECCTTCEEEET-TEEEEEEECCSSSTTCEEEEE
T ss_pred CcccC-------------C-----CCCEEeCCCCEEEEC-CEEEEEEECCCCCCCCEEEEE
Confidence 86321 0 023456788999996 899999998 89999999998
No 47
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A*
Probab=99.27 E-value=1.4e-11 Score=119.33 Aligned_cols=108 Identities=13% Similarity=0.103 Sum_probs=81.2
Q ss_pred eEEEEe--CCcEEEEecCCCCc---------------cccccCEEEeccCCccccCChHHHHHHhCcCCCCCCEEecChh
Q 018507 92 ETCVII--PELKCAFDIGRCPT---------------RAIQQNFVFITHGHLDHIGGLPMYVASRGLYNLKPPTIFVPPS 154 (355)
Q Consensus 92 ~s~~~i--~~~~iLID~G~~~~---------------~~~~id~I~lTH~H~DHi~GL~~l~~~~~~~~~~~~~Iy~~~~ 154 (355)
.+|+++ ++..+|||+|.... ...+|++||+||.|.||++|+..+...+ ...+||+++.
T Consensus 35 ~n~~li~~~~~~iLiD~g~~~~~~~~~~~l~~~~~~~~~~~i~~ii~TH~H~DH~gg~~~l~~~~-----p~~~v~~~~~ 109 (404)
T 2ohh_A 35 YNAYLVCGDEGVALIDNSYPGTFDELMARVEDALQQVGMERVDYIIQNHVEKDHSGVLVELHRRF-----PEAPIYCTEV 109 (404)
T ss_dssp ECCEEEECSSCEEEECCCCTTCHHHHHHHHHHHHHHHTCCCCCEEECSCCSHHHHTTHHHHHHHS-----TTCCEEECHH
T ss_pred EEEEEEEeCCcEEEEeCCCCccHHHHHHHHHHHhccCCccCCCEEEeCCCCCcccchHHHHHHHC-----CCCEEEECHH
Confidence 446666 34589999998621 1136899999999999999999887532 2356999999
Q ss_pred hHHHHHHHHHHHHhcCCCcCceeEEEcCCCCeeeecCCeEEEEEEcC--CCCCCeEEEEE
Q 018507 155 IKEDVEKLFEIHRSLGNVELNLDLVALDVGETYEMRNDIVVRPFKTH--HVIPSQGYVIY 212 (355)
Q Consensus 155 ~~~~l~~~~~~~~~~~~~~~~~~~~~l~~g~~~~i~~g~~v~~~~~~--H~~~~~g~~i~ 212 (355)
+.+.++..+. .. ....++.+..|+.+.++ +.+++++++. |..++++|.+.
T Consensus 110 ~~~~~~~~~~----~~---~~~~~~~~~~g~~~~~g-~~~i~~~~~p~gH~~~~~~~~~~ 161 (404)
T 2ohh_A 110 AVKGLLKHYP----SL---REAEFMTVKTGDVLDLG-GKTLTFLETPLLHWPDSMFTLLD 161 (404)
T ss_dssp HHHHHHHHCG----GG---GGSCEEECCTTCEEECS-SCEEEEEECTTSSSTTCEEEEEE
T ss_pred HHHHHHHHhc----cc---ccCCceEcCCCCEEEEC-CEEEEEEeCCCCCCCCceEEEEC
Confidence 8887765421 10 12356788899999996 8999999985 99999999875
No 48
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.26 E-value=1.4e-11 Score=122.27 Aligned_cols=118 Identities=14% Similarity=0.122 Sum_probs=84.8
Q ss_pred eEEEEEeec-CceEEEEe----CCcEEEEecCCCCccc--------cccCEEEeccCCccccCChHHHHHHhCcCCCCCC
Q 018507 81 YTIEGVSIG-GHETCVII----PELKCAFDIGRCPTRA--------IQQNFVFITHGHLDHIGGLPMYVASRGLYNLKPP 147 (355)
Q Consensus 81 ~~i~~~~~g-~~~s~~~i----~~~~iLID~G~~~~~~--------~~id~I~lTH~H~DHi~GL~~l~~~~~~~~~~~~ 147 (355)
+.|.....| ..++|+++ ++..+|||+|.+.... ++|++||+||.|+||++|+..+.... ..
T Consensus 4 m~i~~~~~~~~~~n~yli~~~~~~~~ilID~g~~~~~~~~~l~~~~~~i~~Il~TH~H~DH~gg~~~l~~~~------~~ 77 (474)
T 3tp9_A 4 MYLRRFYDEGLAHASYLVGCQETGEACVIDPARDVEPYLLTAKREGLRIVAALETHIHADFVSGAREMADRA------GA 77 (474)
T ss_dssp EEEEEEEETTTTEEEEEEEETTTCEEEEESCCSCCHHHHHHHHHHTCEEEEEECSSCCSSSCCCHHHHHHHH------CC
T ss_pred eEEEEEecCCceeEEEEEEECCCCEEEEEcCCCChHHHHHHHHHcCCeeEEEEcCcCchhhhCCHHHHHHHH------CC
Confidence 344444444 35677777 2568999999875432 26999999999999999999997643 35
Q ss_pred EEecChhhHHHHHHHHHHHHhcCCCcCceeEEEcCCCCeeeecCCeEEEEEEc-CCCCCCeEEEEEEc
Q 018507 148 TIFVPPSIKEDVEKLFEIHRSLGNVELNLDLVALDVGETYEMRNDIVVRPFKT-HHVIPSQGYVIYLL 214 (355)
Q Consensus 148 ~Iy~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~g~~~~i~~g~~v~~~~~-~H~~~~~g~~i~~~ 214 (355)
+||+++.....+...+ ......+.+.+|+.+.++ +++++++.+ +|+.++++|++...
T Consensus 78 ~i~~~~~~~~~~~~~~---------~~~~~~~~~~~g~~~~~g-~~~i~~i~tPGHt~g~~~~~~~~~ 135 (474)
T 3tp9_A 78 AICVSDEGPPEWKSEY---------VKAYPHRLLKDGDELHFG-NVRIVVMHTPGHTPEHVSYLLYDG 135 (474)
T ss_dssp EEEEECCSCGGGCCGG---------GGGSSEEEECTTCEEEET-TEEEEEEECCSSSSSCEEEEEEET
T ss_pred cEEEcCcchhhhcccc---------cccccceECCCCCEEEEC-CEEEEEEECCCCCCCCEEEEEecC
Confidence 6888776543321100 111234678899999996 999999999 79999999999754
No 49
>1mqo_A Beta-lactamase II; alpha-beta/BETA-alpha fold, hydrolase; HET: CIT; 1.35A {Bacillus cereus} SCOP: d.157.1.1 PDB: 1bc2_A 1bvt_A* 3i0v_A 3i11_A 3i13_A 3i14_A 3i15_A 2uyx_A 2bc2_A 3bc2_A 2bfl_A 2bfk_A 2bfz_B 2bg2_A 2bg7_A 2bg8_A 1dxk_A 3kns_A 3knr_A 2bfz_A ...
Probab=99.26 E-value=7.1e-12 Score=111.87 Aligned_cols=103 Identities=17% Similarity=0.122 Sum_probs=75.3
Q ss_pred eEEEEe--CCcEEEEecCCCCc----------c--ccccCEEEeccCCccccCChHHHHHHhCcCCCCCCEEecChhhHH
Q 018507 92 ETCVII--PELKCAFDIGRCPT----------R--AIQQNFVFITHGHLDHIGGLPMYVASRGLYNLKPPTIFVPPSIKE 157 (355)
Q Consensus 92 ~s~~~i--~~~~iLID~G~~~~----------~--~~~id~I~lTH~H~DHi~GL~~l~~~~~~~~~~~~~Iy~~~~~~~ 157 (355)
.+|+++ ++..+|||+|.+.. . ..+|++||+||.|.||++|+..+... .++||+++...+
T Consensus 41 ~n~~li~~~~~~iliD~G~~~~~~~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~l~~~-------~~~v~~~~~~~~ 113 (227)
T 1mqo_A 41 SNGLVLNTSKGLVLVDSSWDDKLTKELIEMVEKKFQKRVTDVIITHAHADRIGGIKTLKER-------GIKAHSTALTAE 113 (227)
T ss_dssp EEEEEEEETTEEEEESCCSSHHHHHHHHHHHHHHHTSCEEEEECCCCSHHHHTTHHHHHHH-------TCEEECBHHHHH
T ss_pred ceEEEEEeCCeEEEEECCCChHHHHHHHHHHHHhcCCCceEEEeCCCCchhccchHHHhhC-------CcEEEeccchHH
Confidence 456666 46789999998752 1 13689999999999999999988652 367999988876
Q ss_pred HHHHHHHHHHhcCCCcCceeEEEcCCCCeeeecCCeEEEEE-Ec-CCCCCCeEEEEE
Q 018507 158 DVEKLFEIHRSLGNVELNLDLVALDVGETYEMRNDIVVRPF-KT-HHVIPSQGYVIY 212 (355)
Q Consensus 158 ~l~~~~~~~~~~~~~~~~~~~~~l~~g~~~~i~~g~~v~~~-~~-~H~~~~~g~~i~ 212 (355)
.++.. .+. ..+..+..++.+.++ +++++++ ++ +|+.++++|.+.
T Consensus 114 ~~~~~-----~~~-----~~~~~~~~~~~~~~g-~~~i~~~~~~pgHt~g~~~~~~~ 159 (227)
T 1mqo_A 114 LAKKN-----GYE-----EPLGDLQTVTNLKFG-NMKVETFYPGKGHTEDNIVVWLP 159 (227)
T ss_dssp HHHHT-----TCC-----CCCCCBCSEEEEEET-TEEEEEECCCCSSSSSCCEEEET
T ss_pred HHHhc-----CCC-----CCccccCCCCeeeEC-CEEEEEEecCCCCCCCCEEEEEC
Confidence 65431 111 122345667788886 8999987 44 999999999884
No 50
>2p18_A Glyoxalase II; metalloprotein, beta sandwich, alpha-helical domain, hydrola; HET: SPD; 1.80A {Leishmania infantum} PDB: 2p1e_A*
Probab=99.25 E-value=5.6e-11 Score=111.57 Aligned_cols=116 Identities=16% Similarity=0.150 Sum_probs=81.9
Q ss_pred CeEEEEEeecCceEEEEe-C---CcEEEEecCCCCc-------c-----c-----cccCEEEeccCCccccCChHHHHHH
Q 018507 80 GYTIEGVSIGGHETCVII-P---ELKCAFDIGRCPT-------R-----A-----IQQNFVFITHGHLDHIGGLPMYVAS 138 (355)
Q Consensus 80 ~~~i~~~~~g~~~s~~~i-~---~~~iLID~G~~~~-------~-----~-----~~id~I~lTH~H~DHi~GL~~l~~~ 138 (355)
.+.|.........+|+++ + +..+|||+|.+.. . . .+|++||+||.|+||++|+..+...
T Consensus 28 ~m~i~~i~~~~~n~~ylI~~~~~~~~ilID~G~~~~~~~~~l~~~l~~~g~~~~~~~i~~IllTH~H~DH~gg~~~l~~~ 107 (311)
T 2p18_A 28 AFSVTVVPTLKDNFSYLINDHTTHTLAAVDVNADYKPILTYIEEHLKQQGNADVTYTFSTILSTHKHWDHSGGNAKLKAE 107 (311)
T ss_dssp TEEEEEEEETTTEEEEEEEETTTTEEEEESCCSCCHHHHHHHHHTC--------CCEEEEEEESSSSHHHHTTHHHHHHH
T ss_pred CcEEEEEecCCCcEEEEEEeCCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCCCCCCccEEEeCCCCccccCCHHHHHHh
Confidence 456666665555556666 3 4589999975431 1 1 4689999999999999999998764
Q ss_pred hCcC-CCCCCEEecChhhHHHHHHHHHHHHhcCCCcCceeEEEcCCCCeeeecCCeEEEEEEc-CCCCCCeEEEEEE
Q 018507 139 RGLY-NLKPPTIFVPPSIKEDVEKLFEIHRSLGNVELNLDLVALDVGETYEMRNDIVVRPFKT-HHVIPSQGYVIYL 213 (355)
Q Consensus 139 ~~~~-~~~~~~Iy~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~g~~~~i~~g~~v~~~~~-~H~~~~~g~~i~~ 213 (355)
+... ....++||+++... +. .....+.+|+.+.++ +.+++++.+ +|+.++++|+++.
T Consensus 108 ~~~~~~~~~~~v~~~~~~~------------~~-----~~~~~l~~g~~l~lg-~~~l~vi~tPGHT~g~i~~~~~~ 166 (311)
T 2p18_A 108 LEAMNSTVPVVVVGGANDS------------IP-----AVTKPVREGDRVQVG-DLSVEVIDAPCHTRGHVLYKVQH 166 (311)
T ss_dssp HHSCC--CCCEEEEEGGGT------------CT-----TCSEEECTTCEEEET-TEEEEEEECCSSSTTCEEEEEEC
T ss_pred hhhcccCCCCEEEEechhc------------CC-----CCceEeCCCCEEEEC-CeEEEEEECCCCCcccEEEEEec
Confidence 3211 11247799986541 11 123456789999996 899999998 9999999999863
No 51
>1sml_A Protein (penicillinase); metallo-beta-lactamase, antibiotic resistance, binuclear zinc, hydrolase; 1.70A {Stenotrophomonas maltophilia} SCOP: d.157.1.1 PDB: 2aio_A* 2fm6_A 2fu6_A 2fu7_A* 2fu8_A* 2fu9_A* 2gfj_A* 2gfk_A* 2h6a_A 2hb9_A* 2qdt_A* 2qjs_A 2qin_A
Probab=99.25 E-value=1.5e-11 Score=112.59 Aligned_cols=115 Identities=14% Similarity=0.117 Sum_probs=80.0
Q ss_pred eEEEEe--CCcEEEEecCCCCccc----------c---ccCEEEeccCCccccCChHHHHHHhCcCCCCCCEEecChhhH
Q 018507 92 ETCVII--PELKCAFDIGRCPTRA----------I---QQNFVFITHGHLDHIGGLPMYVASRGLYNLKPPTIFVPPSIK 156 (355)
Q Consensus 92 ~s~~~i--~~~~iLID~G~~~~~~----------~---~id~I~lTH~H~DHi~GL~~l~~~~~~~~~~~~~Iy~~~~~~ 156 (355)
.+|+++ ++..+|||+|.+.... + +|++||+||.|.||++|+..+.... .++||+++.+.
T Consensus 38 ~~~~li~~~~~~iLID~G~~~~~~~l~~~l~~~g~~~~~i~~IilTH~H~DH~gg~~~l~~~~------~~~v~~~~~~~ 111 (269)
T 1sml_A 38 LTALLVQTPDGAVLLDGGMPQMASHLLDNMKARGVTPRDLRLILLSHAHADHAGPVAELKRRT------GAKVAANAESA 111 (269)
T ss_dssp BCCEEEEETTEEEEECCBSGGGHHHHHHHHHHTTCCGGGEEEEECSCCSHHHHTTHHHHHHHS------SCEEEECHHHH
T ss_pred cEEEEEEeCCceEEEECCCCccHHHHHHHHHHcCCChHHCcEEEeCCCCccccCCHHHHHHhc------CCeEEECHHHH
Confidence 445555 4568999999753211 1 4899999999999999999987532 36799999887
Q ss_pred HHHHHHHHHHHhcCC---CcCceeEEEcCCCCeeeecCCeEEEEEEc-CCCCCCeEEEEEE
Q 018507 157 EDVEKLFEIHRSLGN---VELNLDLVALDVGETYEMRNDIVVRPFKT-HHVIPSQGYVIYL 213 (355)
Q Consensus 157 ~~l~~~~~~~~~~~~---~~~~~~~~~l~~g~~~~i~~g~~v~~~~~-~H~~~~~g~~i~~ 213 (355)
+.++........+.. .......+.++.|+.+.++ +++++++++ +|+.++++|++..
T Consensus 112 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g-~~~i~~~~~pGHt~g~~~~~~~~ 171 (269)
T 1sml_A 112 VLLARGGSDDLHFGDGITYPPANADRIVMDGEVITVG-GIVFTAHFMAGHTPGSTAWTWTD 171 (269)
T ss_dssp HHHHTTTCSBTTTBTSSCCCCCCCSEECCTTCEEEET-TEEEEEEECCSSSTTCEEEEEEE
T ss_pred HHHhcCCccccccccccCCCCCCCCeEeCCCCEEEEC-CEEEEEEECCCCCcccEEEEEec
Confidence 776542100000000 0001123567889999996 999999998 6999999999875
No 52
>2vw8_A PA1000, PQSE; quinolone signal response protein, signaling protein, SSPF; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 2q0j_A 2q0i_A 3dh8_A*
Probab=99.24 E-value=5.1e-11 Score=111.02 Aligned_cols=116 Identities=16% Similarity=0.107 Sum_probs=79.3
Q ss_pred eEEEEe---CCcEEEEecCCCCc-------------cccccCEEEeccCCccccCChHHHHHHhCcCCCCCCEEecChhh
Q 018507 92 ETCVII---PELKCAFDIGRCPT-------------RAIQQNFVFITHGHLDHIGGLPMYVASRGLYNLKPPTIFVPPSI 155 (355)
Q Consensus 92 ~s~~~i---~~~~iLID~G~~~~-------------~~~~id~I~lTH~H~DHi~GL~~l~~~~~~~~~~~~~Iy~~~~~ 155 (355)
.+|+++ ++..+|||+|.+.. ...+|++||+||.|.||++|+..+... ....+||+++..
T Consensus 24 ~n~~li~~~~~~~iLID~G~~~~~~~~~~~l~~~~~~~~~i~~Ii~TH~H~DH~gg~~~l~~~-----~~~a~v~~~~~~ 98 (303)
T 2vw8_A 24 VPVFLLRLGEASWALVEGGISRDAELVWADLCRWVADPSQVHYWLITHKHYDHCGLLPYLCPR-----LPNVQVLASERT 98 (303)
T ss_dssp SCEEEEEEETTEEEEECCCCGGGHHHHHHHHHHHCSCGGGEEEEECCCCSTTTTTTHHHHGGG-----CTTCEEEEEHHH
T ss_pred ceEEEEEeCCCceEEEECCCCCcHHHHHHHHHHHhcCcccceEEEeccCCccccCCHHHHHHh-----CCCCeEEECHHH
Confidence 445555 45689999998531 112689999999999999999988542 134679999988
Q ss_pred HHHHHHHHH-----HHH-----hcCCC-----cCceeEEEcCCCCeeeecCCeEEEEEEc-CCCCCCeEEEEE
Q 018507 156 KEDVEKLFE-----IHR-----SLGNV-----ELNLDLVALDVGETYEMRNDIVVRPFKT-HHVIPSQGYVIY 212 (355)
Q Consensus 156 ~~~l~~~~~-----~~~-----~~~~~-----~~~~~~~~l~~g~~~~i~~g~~v~~~~~-~H~~~~~g~~i~ 212 (355)
.+.+..... ... .+... .....+..+.+|+.+.+++|.+++++.+ +|+.++++|.+.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~lg~g~~l~~i~~pGHt~g~~~~~~~ 171 (303)
T 2vw8_A 99 CQAWKSESAVRVVERLNRQLLRAEQRLPEACAWDALPVRAVADGEWLELGPRHRLQVIEAHGHSDDHVVFYDV 171 (303)
T ss_dssp HHHTTCHHHHHHHHHHHHHTCCTTCCCCCCCCGGGSCEEEECTTCEEEEETTEEEEEEECTTSSTTCEEEEET
T ss_pred HHHHhccchhhHHHHHHHHHHHhhcccccccCCCCCCceEcCCCCEEecCCCeEEEEEECCCCCcccEEEEEC
Confidence 776543211 000 01000 0123457778899999973389998888 899999999884
No 53
>3dha_A N-acyl homoserine lactone hydrolase; zinc bimetallohydrolase, quorum quenching; HET: C6L GOL; 0.95A {Bacillus thuringiensis serovar kurstakorganism_taxid} PDB: 3dhb_A* 3dhc_A* 2a7m_A* 2br6_A 2btn_A
Probab=99.24 E-value=2.2e-11 Score=110.37 Aligned_cols=85 Identities=18% Similarity=0.149 Sum_probs=56.1
Q ss_pred cCEEEeccCCccccCChHHHHHHhCcCCCCCCEEecChhhHHHHHHHHHHHHhcCCCcCceeEEEcCCCCeeeecCCeEE
Q 018507 116 QNFVFITHGHLDHIGGLPMYVASRGLYNLKPPTIFVPPSIKEDVEKLFEIHRSLGNVELNLDLVALDVGETYEMRNDIVV 195 (355)
Q Consensus 116 id~I~lTH~H~DHi~GL~~l~~~~~~~~~~~~~Iy~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~g~~~~i~~g~~v 195 (355)
|++||+||.|+||++|+..+. ..+||+++...+.+.....+..... ....++..++ ++...++ ++++
T Consensus 101 I~~VilTH~H~DH~gg~~~~~---------~~~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~-~i~~ 167 (254)
T 3dha_A 101 LLYIISSHLHFDHAGGNGAFT---------NTPIIVQRTEYEAALHREEYMKECI--LPHLNYKIIE-GDYEVVP-GVQL 167 (254)
T ss_dssp CSEEECSCCSHHHHTTGGGCS---------SSCEEEEHHHHHHHHHCTTSCGGGS--CTTSCEEEEC-SSEEEET-TEEE
T ss_pred CCEEEcCCChhhcCCChHHCC---------CCEEEECHHHHHHhhcccccccccc--CcccceEEec-CCccccC-CEEE
Confidence 899999999999999998552 3569999988877654211110000 1122344443 4555554 7666
Q ss_pred EEEEcCCCCCCeEEEEEEc
Q 018507 196 RPFKTHHVIPSQGYVIYLL 214 (355)
Q Consensus 196 ~~~~~~H~~~~~g~~i~~~ 214 (355)
...| +|+.++++|++...
T Consensus 168 ~~~p-GHt~g~~~~~~~~~ 185 (254)
T 3dha_A 168 LYTP-GHSPGHQSLFIETE 185 (254)
T ss_dssp EECC-SSSTTCEEEEEEET
T ss_pred EECC-CCCCCCEEEEEEeC
Confidence 5544 89999999999864
No 54
>2gcu_A Putative hydroxyacylglutathione hydrolase 3; ethylmalonic encephalopathy, ETHE1, structural genomics, protein structure initiative; 1.48A {Arabidopsis thaliana}
Probab=99.22 E-value=1.7e-11 Score=111.28 Aligned_cols=101 Identities=15% Similarity=0.125 Sum_probs=75.8
Q ss_pred cCceEEEEeC------CcEEEEecCCCCccc---------cccCEEEeccCCccccCChHHHHHHhCcCCCCCCEEecCh
Q 018507 89 GGHETCVIIP------ELKCAFDIGRCPTRA---------IQQNFVFITHGHLDHIGGLPMYVASRGLYNLKPPTIFVPP 153 (355)
Q Consensus 89 g~~~s~~~i~------~~~iLID~G~~~~~~---------~~id~I~lTH~H~DHi~GL~~l~~~~~~~~~~~~~Iy~~~ 153 (355)
+...+|+++. +..+|||+|.+.... ++|++||+||.|+||++|+..+...+ ...+||+++
T Consensus 12 ~~~~~~yli~~~~~~~~~~ilID~g~~~~~~~~~~l~~~g~~i~~Il~TH~H~DH~gg~~~l~~~~-----~~~~v~~~~ 86 (245)
T 2gcu_A 12 ESSTFTYLLADVSHPDKPALLIDPVDKTVDRDLKLIDELGLKLIYAMNTHVHADHVTGTGLLKTKL-----PGVKSVISK 86 (245)
T ss_dssp TTTEEEEEEEETTSTTCEEEEESCBGGGHHHHHHHHHHHTCEEEEEECSSCCSSSCBSHHHHHHHS-----TTCEEEEEG
T ss_pred CCceEEEEEEcCCCCCCcEEEEeCCCchHHHHHHHHHHCCCeeeEEEeCCCChhhhhhHHHHHHhC-----CCCeEEecc
Confidence 3456667762 368999999863111 26999999999999999999886522 246799887
Q ss_pred hhHHHHHHHHHHHHhcCCCcCceeEEEcCCCCeeeecCCeEEEEEEc-CCCCCCeEEEEEE
Q 018507 154 SIKEDVEKLFEIHRSLGNVELNLDLVALDVGETYEMRNDIVVRPFKT-HHVIPSQGYVIYL 213 (355)
Q Consensus 154 ~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~g~~~~i~~g~~v~~~~~-~H~~~~~g~~i~~ 213 (355)
.... .....+..|+.+.++ +++++++.+ +|+.++++|++..
T Consensus 87 ~~~~------------------~~~~~~~~g~~~~~g-~~~i~v~~tpGHt~g~~~~~~~~ 128 (245)
T 2gcu_A 87 ASGS------------------KADLFLEPGDKVSIG-DIYLEVRATPGHTAGCVTYVTGE 128 (245)
T ss_dssp GGCC------------------CCSEEECTTCEEEET-TEEEEEEECCSSSTTCEEEEECC
T ss_pred cccc------------------cCCEEcCCCCEEEEC-CEEEEEEECCCCCCCCEEEEECC
Confidence 6421 122466789999996 999999988 8999999999964
No 55
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}
Probab=99.21 E-value=3e-11 Score=117.51 Aligned_cols=106 Identities=15% Similarity=0.130 Sum_probs=78.1
Q ss_pred eEEEEe-CCcEEEEecCCCCcc------------ccccCEEEeccCCccccCChHHHHHHhCcCCCCCCEEecChhhHHH
Q 018507 92 ETCVII-PELKCAFDIGRCPTR------------AIQQNFVFITHGHLDHIGGLPMYVASRGLYNLKPPTIFVPPSIKED 158 (355)
Q Consensus 92 ~s~~~i-~~~~iLID~G~~~~~------------~~~id~I~lTH~H~DHi~GL~~l~~~~~~~~~~~~~Iy~~~~~~~~ 158 (355)
.+|+++ ++..+|||+|..... ..+|++||+||.|.||++|+..+... ....+||+++.+.+.
T Consensus 41 ~n~~li~~~~~iLID~G~~~~~~~~~~~l~~~~~~~~i~~ii~TH~H~DH~gg~~~l~~~-----~~~~~v~~~~~~~~~ 115 (414)
T 2q9u_A 41 YNSYFIDDECPTVIDSVKYPFAEEWLSRIAACCPLDKIKYVVMNHAEGDHASSLKDHYHK-----FTNATFVCTKKCQEH 115 (414)
T ss_dssp ECCEEECSSSCEEECCCCGGGHHHHHHHHHHHSCGGGCCEEECSCCSGGGTTTHHHHGGG-----STTCEEEECHHHHHH
T ss_pred eeEEEEECCCEEEEeCCCcccHHHHHHHHHHhcCcccCCEEEeCCCCcchhcCHHHHHHH-----CCCCEEEECHHHHHH
Confidence 446666 456899999985311 12689999999999999999988642 134679999998887
Q ss_pred HHHHHHHHHhcCCCcCceeEEEcCCCCeeeecCCeEEEEEEcC--CCCCCeEEEE
Q 018507 159 VEKLFEIHRSLGNVELNLDLVALDVGETYEMRNDIVVRPFKTH--HVIPSQGYVI 211 (355)
Q Consensus 159 l~~~~~~~~~~~~~~~~~~~~~l~~g~~~~i~~g~~v~~~~~~--H~~~~~g~~i 211 (355)
+...+. . ....+..+.+|+.+.++ +.+++++++. |+.+++++..
T Consensus 116 ~~~~~~----~----~~~~~~~~~~g~~~~lg-~~~~~~~~~p~gHt~~~~~~~~ 161 (414)
T 2q9u_A 116 LKILYG----M----EKATWLIVDDKYTLKIG-KRTLKFIPVPLLHWPDSTFTYC 161 (414)
T ss_dssp HHHHHC----C----TTCCEEECCTTCCEECS-SCEEEEEECTTSSSTTCEEEEE
T ss_pred HHHHhC----C----CCCeeEEeCCCCEEEEC-CeEEEEEeCCCCCCCCceEEEE
Confidence 765431 1 11356778889999996 8888888875 8888877654
No 56
>4hl2_A Beta-lactamase NDM-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ZZ7; 1.05A {Klebsiella pneumoniae} PDB: 4hl1_A* 4h0d_A* 4gyu_A* 4gyq_A 3q6x_A* 3spu_A 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A
Probab=99.19 E-value=5.7e-12 Score=113.68 Aligned_cols=109 Identities=12% Similarity=0.073 Sum_probs=73.1
Q ss_pred eEEEEe--CCcEEEEecCCCCc--c----------ccccCEEEeccCCccccCChHHHHHHhCcCCCCCCEEecChhhHH
Q 018507 92 ETCVII--PELKCAFDIGRCPT--R----------AIQQNFVFITHGHLDHIGGLPMYVASRGLYNLKPPTIFVPPSIKE 157 (355)
Q Consensus 92 ~s~~~i--~~~~iLID~G~~~~--~----------~~~id~I~lTH~H~DHi~GL~~l~~~~~~~~~~~~~Iy~~~~~~~ 157 (355)
.+|+++ ++..+|||||.... . ..+|++||+||.|.||++|+..+... .++||+++.+.+
T Consensus 48 ~n~~li~~~~~~iLID~G~~~~~~~~l~~~l~~~~~~~i~~vi~TH~H~DH~gg~~~l~~~-------~~~v~~~~~~~~ 120 (243)
T 4hl2_A 48 SNGLIVRDGGRVLVVDTAWTDDQTAQILNWIKQEINLPVALAVVTHAHQDKMGGMDALHAA-------GIATYANALSNQ 120 (243)
T ss_dssp EEEEEEEETTEEEEESCCSSHHHHHHHHHHHHHHTCCCEEEEEECSSSHHHHTTHHHHHHT-------TCEEEEEHHHHH
T ss_pred ceEEEEEECCcEEEEECCCCCccHHHHHHHHHHhhCCCeeEEEECCCCccccCCHHHHHhC-------CCeEEECHHHHH
Confidence 566776 45689999995321 0 23689999999999999999998651 467999998876
Q ss_pred HHHHHHHHHHhcCCCcCc-eeEEEcCCCCeeeecCCeEEEEEEc-CCCCCCeEEEEE
Q 018507 158 DVEKLFEIHRSLGNVELN-LDLVALDVGETYEMRNDIVVRPFKT-HHVIPSQGYVIY 212 (355)
Q Consensus 158 ~l~~~~~~~~~~~~~~~~-~~~~~l~~g~~~~i~~g~~v~~~~~-~H~~~~~g~~i~ 212 (355)
.++.... ........ .....+..++.+.++ ++++ .+.+ +|+.++++|.+.
T Consensus 121 ~~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~g-~~~v-~~~~pGHt~g~~~~~~~ 172 (243)
T 4hl2_A 121 LAPQEGM---VAAQHSLTFAANGWVEPATAPNFG-PLKV-FYPGPGHTSDNITVGID 172 (243)
T ss_dssp HGGGTTC---CCCSEEECBCTTSBBCGGGSTTCT-TEEE-ECCCSSSSTTCCEEEET
T ss_pred HHhcccc---cccccccccccceEecCCCeEEEC-CEEE-EeCCCCCCcCCEEEEEc
Confidence 6643210 00000000 011235567788886 8888 4444 899999999885
No 57
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=99.18 E-value=1e-10 Score=115.77 Aligned_cols=117 Identities=12% Similarity=0.064 Sum_probs=84.3
Q ss_pred eEEEEEeec-CceEEEEe----CCcEEEEecCCCCccc--------cccCEEEeccCCccccCChHHHHHHhCcCCCCCC
Q 018507 81 YTIEGVSIG-GHETCVII----PELKCAFDIGRCPTRA--------IQQNFVFITHGHLDHIGGLPMYVASRGLYNLKPP 147 (355)
Q Consensus 81 ~~i~~~~~g-~~~s~~~i----~~~~iLID~G~~~~~~--------~~id~I~lTH~H~DHi~GL~~l~~~~~~~~~~~~ 147 (355)
+.|+....+ ...+|+++ +++.+|||+|.+.... ++|++||+||.|+||++|+..+.... ..
T Consensus 25 m~i~~~~~~~~~~nsyli~~~~~~~~vlID~g~~~~~~~~~l~~~g~~i~~Il~TH~H~DH~gg~~~l~~~~------~a 98 (466)
T 3r2u_A 25 MFFKQFYDKHLSQASYLIGCQKTGEAMIIDPIRDLSSYIRVADEEGLTITHAAETHIHADFASGIRDVAIKL------NA 98 (466)
T ss_dssp EEEEEEEETTTTEEEEEEEETTTCEEEEESCCSCCHHHHHHHHHHTCEEEEEECSSCCSSSCCCHHHHHHHH------CC
T ss_pred eEEEEEecCCccceEEEEEeCCCCEEEEEcCCCCHHHHHHHHHHCCCeeeEEEECCCChhhhccHHHHHHhh------CC
Confidence 445444443 45667777 3468999999776432 26999999999999999999987643 35
Q ss_pred EEecChhhHHHHHHHHHHHHhcCCCcCceeEEEcCCCCeeeecCCeEEEEEEc-CCCCCCeEEEEEEc
Q 018507 148 TIFVPPSIKEDVEKLFEIHRSLGNVELNLDLVALDVGETYEMRNDIVVRPFKT-HHVIPSQGYVIYLL 214 (355)
Q Consensus 148 ~Iy~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~g~~~~i~~g~~v~~~~~-~H~~~~~g~~i~~~ 214 (355)
+||+++.....+. .. ........+.+|+.+.++ +++++++.+ +|++++++|++...
T Consensus 99 ~v~~~~~~~~~~~--------~~--~~~~~~~~~~~g~~l~~g-~~~l~vi~tPGHT~g~~~~~~~~~ 155 (466)
T 3r2u_A 99 NIYVSGESDDTLG--------YK--NMPNHTHFVQHNDDIYVG-NIKLKVLHTPGHTPESISFLLTDE 155 (466)
T ss_dssp EEEEECCSCTTTS--------CC--SCCTTCEEECTTCEEEET-TEEEEEEECCSSSTTCEEEEEECG
T ss_pred eEEECcchhhhhc--------cc--cCCCCCEEeCCCCEEEEC-CEEEEEEECCCCCCCCEEEEEcCC
Confidence 6888876422211 00 011145678889999996 999999999 79999999999753
No 58
>3aj3_A MLR6805 protein, 4-pyridoxolactonase; Zn-protein, metallo-beta-lactamase, hydrolase; 1.58A {Mesorhizobium loti} PDB: 3aj0_A
Probab=99.15 E-value=1.3e-11 Score=113.19 Aligned_cols=109 Identities=18% Similarity=0.191 Sum_probs=69.3
Q ss_pred eEEEEe--CCcEEEEecCCCCcc--------------------c-----c---ccCEEEeccCCccccCChHHHHHHhCc
Q 018507 92 ETCVII--PELKCAFDIGRCPTR--------------------A-----I---QQNFVFITHGHLDHIGGLPMYVASRGL 141 (355)
Q Consensus 92 ~s~~~i--~~~~iLID~G~~~~~--------------------~-----~---~id~I~lTH~H~DHi~GL~~l~~~~~~ 141 (355)
.+|+++ ++..+|||+|.+... . + +|++||+||.|+||++|+..+
T Consensus 35 ~~~~li~~~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~i~~VilTH~H~DH~gg~~~~------ 108 (274)
T 3aj3_A 35 VYSILIEHAEGRFLIDTGYDYDHVMKVLPFEKPIQEKHQTIPGALGLLGLEPRDIDVVVNSHFHFDHCGGNKYF------ 108 (274)
T ss_dssp EEEEEEEETTEEEEECCCCCHHHHHHHCGGGCCBCCGGGSHHHHHHHTTCCGGGCCEEECSCCSGGGTTTGGGC------
T ss_pred EEEEEEEeCCccEEEECCCCcccccCccccCCcccCccccHHHHHHHcCCCHHHCCEEEecCcCcccCCchhhC------
Confidence 346666 456899999987521 1 1 489999999999999999765
Q ss_pred CCCCCCEEecChhhHHHHHHHHHH-----H------------H----hcCCC-cCceeEEEcCCCCeeeecCCeEEEEEE
Q 018507 142 YNLKPPTIFVPPSIKEDVEKLFEI-----H------------R----SLGNV-ELNLDLVALDVGETYEMRNDIVVRPFK 199 (355)
Q Consensus 142 ~~~~~~~Iy~~~~~~~~l~~~~~~-----~------------~----~~~~~-~~~~~~~~l~~g~~~~i~~g~~v~~~~ 199 (355)
...+||+++...+.+...... . . .+... ....++..++. .+.++ | +++.+.
T Consensus 109 ---~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~-g-~~~v~~ 181 (274)
T 3aj3_A 109 ---PHAKKICHRSEVPQACNPQPFEHLGYSDLSFSAEAAEARGATAQLLEGTTRANSTFEGIDG--DVDLA-R-GVKLIS 181 (274)
T ss_dssp ---TTSEEEEETTHHHHHHSCCGGGTTTTCCCTTCHHHHHHHTCGGGCCTTCCSTTSCEEEECS--SEEEE-T-TEEEEE
T ss_pred ---CCCEEEECHHHHHHHhCcCCccccccChhhhccccccccccccccccccccCCCCceEcCC--ccccC-C-EEEEEE
Confidence 135799998887766532110 0 0 00000 01234455542 46775 7 444455
Q ss_pred c-CCCCCCeEEEEEE
Q 018507 200 T-HHVIPSQGYVIYL 213 (355)
Q Consensus 200 ~-~H~~~~~g~~i~~ 213 (355)
+ +|+.++++|+++.
T Consensus 182 ~pGHt~g~~~~~~~~ 196 (274)
T 3aj3_A 182 TPGHSIGHYSLLVEF 196 (274)
T ss_dssp CTTSSTTCEEEEECC
T ss_pred CCCCCceeeEEEEEC
Confidence 5 7999999999964
No 59
>2y8b_A Metallo-B-lactamase; hydrolase, cephalosporins, antibiotic recognition; 1.70A {Pseudomonas aeruginosa} PDB: 2y8a_A 2y87_A 2yz3_A* 2whg_A* 2wrs_A* 1ko3_A 1ko2_A
Probab=99.15 E-value=3.6e-10 Score=103.43 Aligned_cols=106 Identities=15% Similarity=0.099 Sum_probs=71.9
Q ss_pred eEEEEe--CCcEEEEecCCCCc--c----------ccccCEEEeccCCccccCChHHHHHHhCcCCCCCCEEecChhhHH
Q 018507 92 ETCVII--PELKCAFDIGRCPT--R----------AIQQNFVFITHGHLDHIGGLPMYVASRGLYNLKPPTIFVPPSIKE 157 (355)
Q Consensus 92 ~s~~~i--~~~~iLID~G~~~~--~----------~~~id~I~lTH~H~DHi~GL~~l~~~~~~~~~~~~~Iy~~~~~~~ 157 (355)
.+|+++ ++..+|||+|.+.. . ..+|++|++||.|.||++|+..+.. ...+||+++...+
T Consensus 68 ~n~~li~~~~~~iLID~G~~~~~~~~l~~~l~~~~g~~i~~VilTH~H~DH~gg~~~~~~-------~~a~v~~~~~~~~ 140 (265)
T 2y8b_A 68 SNGLIVRDADELLLIDTAWGAKNTVALLAEIEKQIGLPVTRSISTHFHDDRVGGVDVLRA-------AGVATYTSPLTRQ 140 (265)
T ss_dssp EEEEEEEETTEEEEESCCSSHHHHHHHHHHHHHHTCSCEEEEECSSSSHHHHTTHHHHHH-------TTCEEEECHHHHH
T ss_pred ceEEEEEECCeEEEEeCCCCHHHHHHHHHHHHHhcCCCeEEEEeCCCChhhcCCHHHHhh-------CCCeEEECHHHHH
Confidence 456666 45789999997521 0 1268999999999999999998754 1467999998887
Q ss_pred HHHHHHHHHHhcCCCcCceeEEE-cCCCCeeeecCCeEEEEEEcCCCCCCeEEEEE
Q 018507 158 DVEKLFEIHRSLGNVELNLDLVA-LDVGETYEMRNDIVVRPFKTHHVIPSQGYVIY 212 (355)
Q Consensus 158 ~l~~~~~~~~~~~~~~~~~~~~~-l~~g~~~~i~~g~~v~~~~~~H~~~~~g~~i~ 212 (355)
.++.... .. ....+.. .++++.+.++ ++++.....+|++++++|.+.
T Consensus 141 ~~~~~~~---~~----~~~~~~~~~~~~~~~~~g-~~~v~~~~pGHt~g~~~~~~~ 188 (265)
T 2y8b_A 141 LAEAAGN---EV----PAHSLKALSSSGDVVRFG-PVEVFYPGAAHSGDNLVVYVP 188 (265)
T ss_dssp HHHHTTC---CC----CSEECSSCSSTTEEEEET-TEEEEECCSSSSTTCCEEEET
T ss_pred HHHhccc---cc----ccccccccCCCCcEEeec-CEEEEecCCCCCCCCEEEEec
Confidence 7654210 00 0111111 2566777775 777763344999999999884
No 60
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*
Probab=99.14 E-value=2.7e-10 Score=110.80 Aligned_cols=104 Identities=15% Similarity=0.142 Sum_probs=78.5
Q ss_pred EEEEe--CCcEEEEecCCCCcc-c-----------cccCEEEeccCCccccCChHHHHHHhCcCCCCCCEEecChhhHHH
Q 018507 93 TCVII--PELKCAFDIGRCPTR-A-----------IQQNFVFITHGHLDHIGGLPMYVASRGLYNLKPPTIFVPPSIKED 158 (355)
Q Consensus 93 s~~~i--~~~~iLID~G~~~~~-~-----------~~id~I~lTH~H~DHi~GL~~l~~~~~~~~~~~~~Iy~~~~~~~~ 158 (355)
+||+| ++..+|||+|..... + .+||+|++||.|.||++|++.++.... ..++||+++.....
T Consensus 53 NsYLI~~~~~~vLIDtg~~~~~~~~l~~l~~~i~~~~IdyIi~TH~h~DH~G~l~~l~~~~~----~~~~v~~s~~~~~~ 128 (410)
T 4dik_A 53 NAYLVKLNGANVLIDGWKGNYAKEFIDALSKIVDPKEITHIIVNHTEPDASGSLPATLKTIG----HDVEIIASNFGKRL 128 (410)
T ss_dssp EEEEEECSSCEEEECCCCGGGHHHHHHHHTTTSCGGGCCEEECSCCCHHHHTTHHHHHHHHC----SCCEEEECHHHHHH
T ss_pred EEEEEEECCeEEEEeCCCcchHHHHHHHHHHhcCcccCCEEEeCcCCcchhhhHHHHHHHcC----CCCEEEeCHHHHHH
Confidence 46777 456899999965321 1 169999999999999999999876432 34679999988887
Q ss_pred HHHHHHHHHhcCCCcCceeEEEcCCCCeeeecCCeEEEEEEc-C-CCCCCeEEEE
Q 018507 159 VEKLFEIHRSLGNVELNLDLVALDVGETYEMRNDIVVRPFKT-H-HVIPSQGYVI 211 (355)
Q Consensus 159 l~~~~~~~~~~~~~~~~~~~~~l~~g~~~~i~~g~~v~~~~~-~-H~~~~~g~~i 211 (355)
++..+. ...+..+..|+.+.++ +.+++++++ . |.++++.+..
T Consensus 129 l~~~~~----------~~~~~~v~dGd~l~lG-~~~L~~i~tPg~H~p~~~~~y~ 172 (410)
T 4dik_A 129 LEGFYG----------IKDVTVVKDGEEREIG-GKKFKFVMTPWLHWPDTMVTYL 172 (410)
T ss_dssp HHHHHC----------CCCEEECCTTCEEEET-TEEEEEEECTTSSSTTCEEEEE
T ss_pred HHhhcC----------ccceeEecCCCEEeec-ceEEEEecCCCCCCCCCeeEEe
Confidence 765431 1256788999999997 999999888 4 8888776553
No 61
>1ztc_A Hypothetical protein TM0894; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, hydrolase; HET: MSE; 2.10A {Thermotoga maritima} SCOP: d.157.1.11
Probab=99.14 E-value=6.8e-11 Score=105.24 Aligned_cols=112 Identities=19% Similarity=0.153 Sum_probs=69.8
Q ss_pred CceEEEEe--CCcEEEEecCCCCc-----cc--------cccCEEEeccCCccccCChHHHHHHhCcCCCCCCEEecChh
Q 018507 90 GHETCVII--PELKCAFDIGRCPT-----RA--------IQQNFVFITHGHLDHIGGLPMYVASRGLYNLKPPTIFVPPS 154 (355)
Q Consensus 90 ~~~s~~~i--~~~~iLID~G~~~~-----~~--------~~id~I~lTH~H~DHi~GL~~l~~~~~~~~~~~~~Iy~~~~ 154 (355)
+..+|+++ ++..+|||||.... .. .+|++||+||.|.||++|+..+. ..+||+++.
T Consensus 33 ~~~n~~li~~~~~~iLID~G~~~~~~~l~~~l~~~g~~~~~i~~ViiTH~H~DH~gg~~~~~---------~~~v~~~~~ 103 (221)
T 1ztc_A 33 HFSTVVYLEHKDRRIIIDPGNLSSMDELEEKFSELGISPDDITDVLFTHVHLDHIFNSVLFE---------NATFYVHEV 103 (221)
T ss_dssp CBCCEEEEEETTEEEEECCCCGGGHHHHHHHHHHHTCCGGGCCEEECSCCCHHHHGGGGGCT---------TCEEEEEGG
T ss_pred CceEEEEEEeCCeEEEEECCCCcchHHHHHHHHHcCCCHHHCcEEEEcCCccccCCchhhCC---------CCEEEEeHH
Confidence 34556666 45789999997521 11 15899999999999999997552 357888876
Q ss_pred hHHH-HHHH---HH-HHHhcCCCcCceeEEEcCCCCeeeecCCeEEEEEEcCCCCCCeEEEEEEc
Q 018507 155 IKED-VEKL---FE-IHRSLGNVELNLDLVALDVGETYEMRNDIVVRPFKTHHVIPSQGYVIYLL 214 (355)
Q Consensus 155 ~~~~-l~~~---~~-~~~~~~~~~~~~~~~~l~~g~~~~i~~g~~v~~~~~~H~~~~~g~~i~~~ 214 (355)
.... ++.. .. .+.... ....++..++.++.+.. +++++...| +|+.++++|+++..
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~l~~-~~~~v~~~p-GHt~g~~~~~~~~~ 164 (221)
T 1ztc_A 104 YKTKNYLSFGTIVGRIYSKVI--SSWKNVVLLKGEESLFD-EKVKVFHTP-WHAREHLSFLLDTE 164 (221)
T ss_dssp GGGSCGGGGCHHHHHHHHHHH--HTCCSEEEECSCCEETT-TTEEEEECC-SSSTTCEEEEEEET
T ss_pred Hhhhhhhhhccchhhhhhhcc--ccccceEEeCCCCEEEC-CeEEEEEcC-CCCcccEEEEEEcC
Confidence 2110 0000 00 000000 01134567777777752 367776666 99999999999864
No 62
>2fhx_A SPM-1; metallo-beta-lactamase, dinuclear zinc, antibiotic resistanc hydrolase, metal binding protein; 1.90A {Pseudomonas aeruginosa}
Probab=99.13 E-value=2.1e-10 Score=103.30 Aligned_cols=170 Identities=14% Similarity=0.033 Sum_probs=107.1
Q ss_pred eEEEEe--CC-cEEEEecCCCCc--c----------ccccCEEEeccCCccccCChHHHHHHhCcCCCCCCEEecChhhH
Q 018507 92 ETCVII--PE-LKCAFDIGRCPT--R----------AIQQNFVFITHGHLDHIGGLPMYVASRGLYNLKPPTIFVPPSIK 156 (355)
Q Consensus 92 ~s~~~i--~~-~~iLID~G~~~~--~----------~~~id~I~lTH~H~DHi~GL~~l~~~~~~~~~~~~~Iy~~~~~~ 156 (355)
.+|+++ ++ ..+|||+|.... . ..+..+||+||.|.||++|+..+.. . ..+||+++.+.
T Consensus 30 ~n~~li~~~~~~~iLiD~G~~~~~~~~l~~~l~~~~~~~~~~vi~TH~H~DH~gg~~~l~~-~------~~~v~~~~~~~ 102 (246)
T 2fhx_A 30 SNVLVAKMLDGTVVIVSSPFENLGTQTLMDWVAKTMKPKKVVAINTHFHLDGTGGNEIYKK-M------GAETWSSDLTK 102 (246)
T ss_dssp EEEEEEECTTSEEEEESCCSSHHHHHHHHHHHHHHHCCSEEEEECCSSSHHHHTTHHHHHH-T------TCEEEEEHHHH
T ss_pred CCEEEEEeCCCeEEEEeCCCCHHHHHHHHHHHHHhcCCCcEEEEeCCCCccccChHHHHhh-c------CCEEEEcHHHH
Confidence 455665 33 479999997521 1 0123479999999999999988754 1 36799999998
Q ss_pred HHHHHHHHHHH-----hcC-----------CCcCceeEEEcCCCCeeeecCCeEEEEEE-c-CCCCCCeEEEEEEcchhh
Q 018507 157 EDVEKLFEIHR-----SLG-----------NVELNLDLVALDVGETYEMRNDIVVRPFK-T-HHVIPSQGYVIYLLRKKL 218 (355)
Q Consensus 157 ~~l~~~~~~~~-----~~~-----------~~~~~~~~~~l~~g~~~~i~~g~~v~~~~-~-~H~~~~~g~~i~~~~~~l 218 (355)
+.+........ .+. .....-.+..+.+|+.+.++ |.+++++. + +|+.++++|.+..
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~g-~~~i~~~~~~pGHt~g~~~~~~~~----- 176 (246)
T 2fhx_A 103 QLRLEENKKDRIKAAEFYKNEDLKRRILSSHPVPADNVFDLKQGKVFSFS-NELVEVSFPGPAHSPDNVVVYFPK----- 176 (246)
T ss_dssp HHHHHHHHHHHHHHHHHCCCHHHHHHHHHTCCCCCSEEECTTTCEEEEET-TEEEEEECCCCSSSTTCCEEEETT-----
T ss_pred HHHHhcchhhhHHHHhhhccccchhhhcccccCCCCceeecCCCCEEEEC-CEEEEEEeCCCCCCCCCEEEEEcC-----
Confidence 88765321100 010 00001134567888899996 89999984 5 8999999998742
Q ss_pred hhhhcccchHHHHHHHhcCceecceeeCCeEEEEcCCCCCccCCccccccCCCCEEEEecccCCCcccHHHHhhcCCCcH
Q 018507 219 KKQYIHLKGKQIEKLKKSGVEITDIILSPEVAFTGDTTSEFMLNPRNADALRAKILITEATFLDDEMSIEHAQQHGHTHL 298 (355)
Q Consensus 219 ~~~~~~~~~~~~~~Lk~~G~~i~~~~~~~~i~y~gDt~~~~~~~~~~~~~~~~d~Li~e~t~~~~~~~~~~a~~~~H~~~ 298 (355)
.+++|+||+-..... + + +.... -..+
T Consensus 177 ----------------------------~~~lf~GD~~~~~~~--------~-~-------~~~~~----------~~~~ 202 (246)
T 2fhx_A 177 ----------------------------KKLLFGGCMIKPKEL--------G-Y-------LGDAN----------VKAW 202 (246)
T ss_dssp ----------------------------TTEEEEETTCCSSCC--------C-C-------CTTCC----------TTTH
T ss_pred ----------------------------CCEEEECCEeccCCC--------C-C-------CCCCC----------HHHH
Confidence 159999999752110 0 0 01111 1125
Q ss_pred HHHHHHHHHcCCCeEEEEecCCCCChhHHHH
Q 018507 299 SEIIENAKWIRNKAVLLTHFSSRYHIEDIRQ 329 (355)
Q Consensus 299 ~~a~~~~~~~~~k~~vltH~s~~~~~~~l~~ 329 (355)
.++++.+.++.++.++..|-... ..+.+++
T Consensus 203 ~~sl~~l~~l~~~~i~pgHg~~~-~~~~l~~ 232 (246)
T 2fhx_A 203 PDSARRLKKFDAKIVIPGHGEWG-GPEMVNK 232 (246)
T ss_dssp HHHHHHGGGSCCSEEEESBSCCB-STHHHHH
T ss_pred HHHHHHHHhCCCCEEECCCCCcC-CHHHHHH
Confidence 56677666778888888887653 3444433
No 63
>3iog_A Beta-lactamase; hydrolase, antibiotic resistance, metal-binding; HET: SDF; 1.41A {Aeromonas hydrophila} SCOP: d.157.1.1 PDB: 1x8i_A 3fai_A* 3iof_A* 1x8h_A 2qds_A* 2gkl_A* 1x8g_A* 3f9o_A 3t9m_A 3sw3_A
Probab=99.13 E-value=6.1e-10 Score=98.78 Aligned_cols=112 Identities=15% Similarity=0.121 Sum_probs=72.2
Q ss_pred ceEEEEe--CCcEEEEecCCCCcc------------ccccCEEEeccCCccccCChHHHHHHhCcCCCCCCEEecChhhH
Q 018507 91 HETCVII--PELKCAFDIGRCPTR------------AIQQNFVFITHGHLDHIGGLPMYVASRGLYNLKPPTIFVPPSIK 156 (355)
Q Consensus 91 ~~s~~~i--~~~~iLID~G~~~~~------------~~~id~I~lTH~H~DHi~GL~~l~~~~~~~~~~~~~Iy~~~~~~ 156 (355)
..+|+++ ++..+|||+|.+... ..+|++||+||.|.||++|+..+.. ...+||+++.+.
T Consensus 22 ~~n~~li~~~~~~iLiD~G~~~~~~~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~l~~-------~~~~v~~~~~~~ 94 (227)
T 3iog_A 22 QENSMVYFGAKGVTVVGATWTPDTARELHKLIKRVSRKPVLEVINTNYHTDRAGGNAYWKS-------IGAKVVSTRQTR 94 (227)
T ss_dssp CEEEEEEECSSCEEEESCCSSHHHHHHHHHHHHTTCCSCEEEEECSSSSHHHHTTHHHHHH-------TTCEEEEEHHHH
T ss_pred cCcEEEEEeCCeEEEEECCCChHHHHHHHHHHHHhcCCCeEEEEeCCCchhhcChHHHHhh-------CCCeEEECHHHH
Confidence 4556666 456899999974311 1268999999999999999998753 236799999999
Q ss_pred HHHHHHHHHHH-----hcC---CCcCceeEEEcCCCCeeeecCCeEEEEEEc--CCCCCCeEEEEE
Q 018507 157 EDVEKLFEIHR-----SLG---NVELNLDLVALDVGETYEMRNDIVVRPFKT--HHVIPSQGYVIY 212 (355)
Q Consensus 157 ~~l~~~~~~~~-----~~~---~~~~~~~~~~l~~g~~~~i~~g~~v~~~~~--~H~~~~~g~~i~ 212 (355)
+.+++...... ... ........... .+ .+.++ +.+++.+.+ +|+++++++.+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~l~-~~~~~~~~~~pGHt~g~~~~~~~ 157 (227)
T 3iog_A 95 DLMKSDWAEIVAFTRKGLPEYPDLPLVLPNVVH-DG-DFTLQ-EGKVRAFYAGPAHTPDGIFVYFP 157 (227)
T ss_dssp HHHHHHHHHHHHHHHHHCTTSCCCCCCCCSEEE-SS-CEEET-TTTEEEECCCCSSSSSCCEEEET
T ss_pred HHHHHhhHHHHHHhhcCCCCCCCccccCCCEee-cC-eEEEc-CcEEEEEecCCCCCCCcEEEEec
Confidence 88876433211 011 00111111122 23 36675 545666664 999999998875
No 64
>3h3e_A Uncharacterized protein TM1679; structural genomics, surface entropy reduction, ISFI, beta- lactamase superfamily, PSI-2; 2.75A {Thermotoga maritima}
Probab=99.07 E-value=6.8e-10 Score=101.70 Aligned_cols=51 Identities=12% Similarity=0.226 Sum_probs=42.2
Q ss_pred HHHHHHHHHHcCCCeEEEEecCCCCChhHHHHHHHHhcccccCceeecccccccccCC
Q 018507 298 LSEIIENAKWIRNKAVLLTHFSSRYHIEDIRQAVLKLQSKVSAKVVPLTEGFKSVYTS 355 (355)
Q Consensus 298 ~~~a~~~~~~~~~k~~vltH~s~~~~~~~l~~~~~~~~~~~~~~v~~a~dGl~~~~~~ 355 (355)
++++++++++.++++++++|.+...... .+.+.++.++.+|+||+++++++
T Consensus 217 l~~tl~~l~~~~~~~i~~~HCTg~~a~~-------~L~~~lp~~v~~~~~G~~iei~~ 267 (267)
T 3h3e_A 217 IEKIVKAFNELGVETVVPCHCTGERAVD-------IFKREFLGKIMDCYAGLKLEVSD 267 (267)
T ss_dssp HHHHHHHHHHTTCCEEEEETTSCHHHHH-------HHHHHCSSEECCCCTTCEEEECC
T ss_pred HHHHHHHHHhcCCCEEEEECCCCHHHHH-------HHHHHCCCCEEEecCceEEEeCC
Confidence 7889999999999999999999865332 33456788999999999998753
No 65
>1p9e_A Methyl parathion hydrolase; Zn containing; 2.40A {Pseudomonas SP} SCOP: d.157.1.5
Probab=99.07 E-value=8e-11 Score=111.42 Aligned_cols=153 Identities=14% Similarity=0.148 Sum_probs=85.9
Q ss_pred ccccccchHHHHHHhHHHHHHHHHhhhhc-cccccCcCeEEEEEeecCceEEEEe--CCcEEEEecCCCCc-----c---
Q 018507 44 ALKSAGFLSSISRAIDEEEEYRKARAAVV-RKGIDLEGYTIEGVSIGGHETCVII--PELKCAFDIGRCPT-----R--- 112 (355)
Q Consensus 44 ~~lGtG~~~gip~~~c~c~~C~~ar~~~~-~~s~~~~~~~i~~~~~g~~~s~~~i--~~~~iLID~G~~~~-----~--- 112 (355)
..|+.|.+. +| .|.|.+|.++...+. ......+.. ....+|+++ ++..+|||+|.+.. .
T Consensus 58 t~l~~g~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~n~~LI~~~~~~iLIDtG~~~~~~~~~~~l~ 127 (331)
T 1p9e_A 58 TALSDGTVA-LP--VDKRLNQPAPKTQSALAKSFQKAPL-------ETSVTGYLVNTGSKLVLVDTGAAGLFGPTLGRLA 127 (331)
T ss_dssp EEEEEEEEE-EC--HHHHBSSCHHHHHHHHHHTTCCSSE-------EEEEEEEEEECSSCEEEECCCCTTSSCTTCCCHH
T ss_pred EEEeCCCEe-CC--HHHcCCCCHHHHHHhhhhccCCCce-------EEEEEEEEEEECCEEEEEECCCCCcCCcchhHHH
Confidence 358888776 66 344566665422110 000011111 122446666 46789999997731 1
Q ss_pred -cc--------ccCEEEeccCCccccCChHHHHHHhCcCCCCCCEEecChhhHHHHHHHHHH-----------HH----h
Q 018507 113 -AI--------QQNFVFITHGHLDHIGGLPMYVASRGLYNLKPPTIFVPPSIKEDVEKLFEI-----------HR----S 168 (355)
Q Consensus 113 -~~--------~id~I~lTH~H~DHi~GL~~l~~~~~~~~~~~~~Iy~~~~~~~~l~~~~~~-----------~~----~ 168 (355)
++ +|++||+||.|.||++|+..+.. .. ....+||+++...+.+...... +. .
T Consensus 128 ~~L~~~Gi~~~~Id~VilTH~H~DHiggl~~~~~-~~---fp~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (331)
T 1p9e_A 128 ANLKAAGYQPEQVDEIYITHMHPDHVGGLMVGEQ-LA---FPNAVVRADQKEADFWLSQTNLDKAPDDESKGFFKGAMAS 203 (331)
T ss_dssp HHHHHTTCCGGGCCEEECSCCCHHHHGGGEETTE-ES---STTCEEECBHHHHHHHSCHHHHTTCSSTTSCHHHHHHHHH
T ss_pred HHHHHcCCCHHHCCEEEeCCcccccCCccccccc-cc---CCCCEEEECHHHHHHHhCchhhccCchhhhhHHHHHHHHH
Confidence 11 49999999999999999973311 11 2346899999888765432100 00 0
Q ss_pred cCCCcCceeEEEcCCCCeeeecCCeEEEEEEc-CCCCCCeEEEEEEc
Q 018507 169 LGNVELNLDLVALDVGETYEMRNDIVVRPFKT-HHVIPSQGYVIYLL 214 (355)
Q Consensus 169 ~~~~~~~~~~~~l~~g~~~~i~~g~~v~~~~~-~H~~~~~g~~i~~~ 214 (355)
+.......+++.++.++++. .| |+.+++ +|+.++++|+++.+
T Consensus 204 ~~~~~~~~~~~~~~~g~~i~--~g--i~vi~tpGHtpG~~~~~i~~~ 246 (331)
T 1p9e_A 204 LNPYVKAGKFKPFSGNTDLV--PG--IKALASHGHTPGHTTYVVESQ 246 (331)
T ss_dssp HHHHHHTTCBCCBCSSEECS--TT--EEEEECTTSSTTCEEEEEEET
T ss_pred hhhhcccCceEEeCCCCEEc--cc--EEEEEcCCCChhCEEEEEEEC
Confidence 00000011334556665554 25 455555 89999999999754
No 66
>1jjt_A IMP-1 metallo beta-lactamase; metallo-beta-lactamase inhibitor, succinic acid inhibitor, I metallo-beta-lactamase, hydrolase; HET: BDS; 1.80A {Pseudomonas aeruginosa} SCOP: d.157.1.1 PDB: 1dd6_A* 1vgn_A* 2doo_A* 1wup_A 1wuo_A 1jje_A* 1ddk_A
Probab=99.05 E-value=1.6e-10 Score=103.20 Aligned_cols=102 Identities=13% Similarity=0.073 Sum_probs=69.8
Q ss_pred eEEEEe--CCcEEEEecCCCCc--c---------ccccCEEEeccCCccccCChHHHHHHhCcCCCCCCEEecChhhHHH
Q 018507 92 ETCVII--PELKCAFDIGRCPT--R---------AIQQNFVFITHGHLDHIGGLPMYVASRGLYNLKPPTIFVPPSIKED 158 (355)
Q Consensus 92 ~s~~~i--~~~~iLID~G~~~~--~---------~~~id~I~lTH~H~DHi~GL~~l~~~~~~~~~~~~~Iy~~~~~~~~ 158 (355)
.+|+++ ++..+|||+|.+.. . ..+|++||+||.|.||++|+..+.. . ..+||+++...+.
T Consensus 33 ~n~~li~~~~~~iliD~g~~~~~~~~~~~~l~~~g~~i~~ii~TH~H~DH~gg~~~l~~-~------~~~v~~~~~~~~~ 105 (228)
T 1jjt_A 33 KHGLVVLVNAEAYLIDTPFTAKDTEKLVTWFVERGYKIKGSISSHFHSDSTGGIEWLNS-R------SIPTYASELTNEL 105 (228)
T ss_dssp EEEEEEEETTEEEEESCCSSHHHHHHHHHHHHTTTCEEEEEECSSSSHHHHTTHHHHHH-T------TCCEEEEHHHHHH
T ss_pred ceEEEEEECCcEEEEeCCCChhhHHHHHHHHHHcCCCeeEEEeCCCChhhhccHHHHHh-C------CCEEEEChHHHHH
Confidence 456666 45689999997531 1 1268999999999999999998864 1 3569999988777
Q ss_pred HHHHHHHHHhcCCCcCceeEEEcCCCCeeeecCCeEEEEE-Ec-CCCCCCeEEEEE
Q 018507 159 VEKLFEIHRSLGNVELNLDLVALDVGETYEMRNDIVVRPF-KT-HHVIPSQGYVIY 212 (355)
Q Consensus 159 l~~~~~~~~~~~~~~~~~~~~~l~~g~~~~i~~g~~v~~~-~~-~H~~~~~g~~i~ 212 (355)
++... .. ... ..+ .++.+.++ +..++.+ .+ +|+.++++|.+.
T Consensus 106 ~~~~~-----~~--~~~---~~~-~g~~~~l~-~~~i~~~~~~pGHt~g~~~~~~~ 149 (228)
T 1jjt_A 106 LKKDG-----KV--QAT---NSF-SGVNYWLV-KNKIEVFYPGPGHTPDNVVVWLP 149 (228)
T ss_dssp HHHTT-----CC--CCS---EEE-CSSCCEEE-TTTEEEECCCCSSSTTCCEEEET
T ss_pred HHhcC-----Cc--Ccc---ccc-cCcceEec-CceEEEEecCCCCCCCcEEEEEC
Confidence 65321 00 001 122 24556665 6677776 55 999999999874
No 67
>3esh_A Protein similar to metal-dependent hydrolase; structural genomics, PSI-2, protein structure initiative; 2.50A {Staphylococcus aureus subsp}
Probab=99.04 E-value=1.6e-10 Score=106.41 Aligned_cols=115 Identities=15% Similarity=0.094 Sum_probs=69.9
Q ss_pred EEEEe--CCcEEEEecCCCCc---------------cc------------cccCEEEeccCCccccCChHHHHHHhCcCC
Q 018507 93 TCVII--PELKCAFDIGRCPT---------------RA------------IQQNFVFITHGHLDHIGGLPMYVASRGLYN 143 (355)
Q Consensus 93 s~~~i--~~~~iLID~G~~~~---------------~~------------~~id~I~lTH~H~DHi~GL~~l~~~~~~~~ 143 (355)
+|+++ ++..+|||||.+.. .. .+|++||+||.|.||++|+..+.... .
T Consensus 49 n~~lI~~~~~~iLID~G~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~Id~IllTH~H~DHigg~~~l~~~~---~ 125 (280)
T 3esh_A 49 HPILIQTAQYNLIIDAGIGNGKLSEKQLRNFGVDEESHIIADLANYNLTPKDIDYVLMTHMHFDHAAGLTDQAGHA---I 125 (280)
T ss_dssp CCEEEECSSCEEESCCTTCSSCSCHHHHHHTTCSSCCCHHHHHHTTTCCTTSCCEEECSCCCHHHHGGGSCTTSCC---S
T ss_pred EEEEEEECCEEEEEECCCCCcccccccccccCCcccchHHHHHHHcCCCHHHCCEEEeCCCcccccCccccccccc---C
Confidence 34555 56799999997652 00 15789999999999999998775310 1
Q ss_pred CCCCEEecChhhHHHHHHHHHHH-HhcCCC---cCceeEEEcCCCCeeeecCCeEEEEEEc-CCCCCCeEEEEEEc
Q 018507 144 LKPPTIFVPPSIKEDVEKLFEIH-RSLGNV---ELNLDLVALDVGETYEMRNDIVVRPFKT-HHVIPSQGYVIYLL 214 (355)
Q Consensus 144 ~~~~~Iy~~~~~~~~l~~~~~~~-~~~~~~---~~~~~~~~l~~g~~~~i~~g~~v~~~~~-~H~~~~~g~~i~~~ 214 (355)
....+||+++...+.+....... ..+... ....++..++.+. .+..+++ .+++ +|++++++|+++.+
T Consensus 126 fp~a~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~gi~--~~~~pGHt~g~~~~~i~~~ 197 (280)
T 3esh_A 126 FENAIHVVQQDEWHEFIAPNIRSKSTYWDKNKGDYSNKLILFEKHF--EPVPGIK--MQHSGGHSFGHTIITIESQ 197 (280)
T ss_dssp STTCEEEEEHHHHHHHHSCCTTGGGTSCGGGCCGGGGGEEEESSEE--CSSTTEE--EEECCSSSTTCEEEEEEET
T ss_pred CCCCEEEECHHHHHHhhCcccccccchhhhhhhhhhheEEEeCCCC--eEcCCEE--EEEcCCCCcccEEEEEEEC
Confidence 13578999998877665311000 000000 0112344454433 3333544 4555 79999999999764
No 68
>4eyb_A Beta-lactamase NDM-1; metallo beta lactamase, antibiotic, hydrolase-antibiotic COM; HET: 0WO; 1.16A {Klebsiella pneumoniae} PDB: 4ey2_A* 4eyf_A* 4exy_A 4exs_B 4eyl_A* 3spu_A 3q6x_A* 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A
Probab=98.87 E-value=4.2e-10 Score=103.35 Aligned_cols=108 Identities=12% Similarity=0.059 Sum_probs=65.6
Q ss_pred eEEEEe--CCcEEEEecCCCCcc------------ccccCEEEeccCCccccCChHHHHHHhCcCCCCCCEEecChhhHH
Q 018507 92 ETCVII--PELKCAFDIGRCPTR------------AIQQNFVFITHGHLDHIGGLPMYVASRGLYNLKPPTIFVPPSIKE 157 (355)
Q Consensus 92 ~s~~~i--~~~~iLID~G~~~~~------------~~~id~I~lTH~H~DHi~GL~~l~~~~~~~~~~~~~Iy~~~~~~~ 157 (355)
++|+++ +++.+|||+|.+... ..+|++|++||.|.||++|+..+.. ..+++|+++.+.+
T Consensus 75 ~N~ylv~~~~~~ilIDtg~~~~~~~~l~~~i~~~~~~~I~~Ii~TH~H~DH~gg~~~l~~-------~~~~v~~~~~~~~ 147 (270)
T 4eyb_A 75 SNGLIVRDGGRVLVVDTAWTDDQTAQILNWIKQEINLPVALAVVTHAHQDKMGGMDALHA-------AGIATYANALSNQ 147 (270)
T ss_dssp EEEEEEEETTEEEEESCCSSHHHHHHHHHHHHHHTCCCEEEEEECSSSHHHHTTHHHHHH-------TTCEEEEEHHHHH
T ss_pred eEEEEEEECCEEEEEeCCCCHHHHHHHHHHHHHhcCCceEEEEeCCCChhhcCcHHHHHH-------CCCeEEECHHHHH
Confidence 446666 456899999976421 1269999999999999999998864 2467999987766
Q ss_pred HHHHHHHHHHhcCCCcCce---eEEEcCCCCeeeecCCeEEEEEEcCCCCCCeEEEEE
Q 018507 158 DVEKLFEIHRSLGNVELNL---DLVALDVGETYEMRNDIVVRPFKTHHVIPSQGYVIY 212 (355)
Q Consensus 158 ~l~~~~~~~~~~~~~~~~~---~~~~l~~g~~~~i~~g~~v~~~~~~H~~~~~g~~i~ 212 (355)
.++... ........ ....++.+..+..+ ++.+.....+|+.+++.+.+.
T Consensus 148 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~pgHT~g~~~~~~~ 199 (270)
T 4eyb_A 148 LAPQEG-----MVAAQHSLTFAANGWVEPATAPNFG-PLKVFYPGPGHTSDNITVGID 199 (270)
T ss_dssp HGGGGT-----CCCCSEEECBCTTSBBCGGGSTTCT-TEEEECCCSSSSSSCCEEEET
T ss_pred HHHhcC-----ccccccccCCCCceeecCceeeecC-ceeEEecccccCCCCEEEEec
Confidence 554311 00000000 00112233334443 555444445888888877764
No 69
>2p97_A Hypothetical protein; putative metal-dependent hydrolase, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.157.1.12
Probab=98.79 E-value=1.5e-08 Score=88.67 Aligned_cols=97 Identities=13% Similarity=0.067 Sum_probs=67.9
Q ss_pred eEEEEe--CCcEEEEecCCCCccc---c----ccCEEEeccCCccccCChHHHHHHhCcCCCCCCEEecChhhHHHHHHH
Q 018507 92 ETCVII--PELKCAFDIGRCPTRA---I----QQNFVFITHGHLDHIGGLPMYVASRGLYNLKPPTIFVPPSIKEDVEKL 162 (355)
Q Consensus 92 ~s~~~i--~~~~iLID~G~~~~~~---~----~id~I~lTH~H~DHi~GL~~l~~~~~~~~~~~~~Iy~~~~~~~~l~~~ 162 (355)
.+|+++ ++..+|||+|...... + +|++|++||. ||++|+..+.... +.+||+++...+.+..
T Consensus 24 ~n~~li~~~~~~iliD~g~~~~~~~~~l~~~g~i~~ii~TH~--DH~gg~~~~~~~~------~a~v~~~~~~~~~~~~- 94 (201)
T 2p97_A 24 FNGFAWIRPEGNILIDPVALSNHDWKHLESLGGVVWIVLTNS--DHVRSAKEIADQT------YTKIAGPVAEKENFPI- 94 (201)
T ss_dssp EEEEEECCTTCCEEESCCCCCHHHHHHHHHTTCCSEEECSSG--GGCTTHHHHHHHS------CCEEEEEGGGTTSCSS-
T ss_pred eeEEEEEeCCeeEEEECCCCcHHHHHHHHhcCCCCEEEECCc--hhhhhHHHHHHhc------CCEEEEcHhHhhhhcc-
Confidence 556776 3568999999543211 1 6999999999 9999999887532 3679998876443211
Q ss_pred HHHHHhcCCCcCceeEEEcCCCCeeeecCCeEEEEEEcCCCCCCeEEEEE
Q 018507 163 FEIHRSLGNVELNLDLVALDVGETYEMRNDIVVRPFKTHHVIPSQGYVIY 212 (355)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~l~~g~~~~i~~g~~v~~~~~~H~~~~~g~~i~ 212 (355)
. ....+.+++.+. .++++...|.+|+.++++|.+.
T Consensus 95 ---------~----~~~~~~~g~~~~--~~~~~~~~p~gHt~g~~~~~~~ 129 (201)
T 2p97_A 95 ---------Y----CDRWLSDGDELV--PGLKVMELQGSKTPGELALLLE 129 (201)
T ss_dssp ---------C----CSEEECTTCBSS--TTEEEEEECSSSSTTEEEEEET
T ss_pred ---------c----CceecCCCCEEc--ceEEEEECCCCCCCCcEEEEEc
Confidence 0 124556677664 2677777777899999998874
No 70
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=98.78 E-value=2e-08 Score=103.38 Aligned_cols=119 Identities=17% Similarity=0.127 Sum_probs=74.4
Q ss_pred eEEEEe--CCcEEEEecCCCCcc-------------ccccCEEEeccCCccccCChHHHHHHhCcCCCCCCEEecChhhH
Q 018507 92 ETCVII--PELKCAFDIGRCPTR-------------AIQQNFVFITHGHLDHIGGLPMYVASRGLYNLKPPTIFVPPSIK 156 (355)
Q Consensus 92 ~s~~~i--~~~~iLID~G~~~~~-------------~~~id~I~lTH~H~DHi~GL~~l~~~~~~~~~~~~~Iy~~~~~~ 156 (355)
.++++| ++..+|||+|..... ...|++||+||.|.||++|+..+...... .....+||+++...
T Consensus 123 ~N~ylI~~~~g~iLIDtG~~~~~a~~~l~~i~~~~~~~~I~~IIlTH~H~DH~GG~~~l~~~~~~-~~~~a~V~a~~~~~ 201 (658)
T 2cfu_A 123 ANITFIRGDSGWIVVDTLTTPATARAAYELVSRELGERPIRTVIYSHAHADHFGGVRGLVEPQQV-ASGAVQIIAPAGFM 201 (658)
T ss_dssp SCEEEEECSSSEEEECCCSSHHHHHHHHHHHHHHHCCCCEEEEECSBSCHHHHTTGGGTCCHHHH-HTTSSEEEEETTHH
T ss_pred eEEEEEEECCEEEEEECCCCHHHHHHHHHHHHhhCCCCCceEEEECCCChhhhCCHHHHHhhhhc-cCCCCEEEEchhHH
Confidence 445555 356899999987531 12689999999999999999876421000 02346799999876
Q ss_pred HHHHH-----------HHHHH-Hh-cCCC------------------cCceeEEEc-CCCCeeeecCCeEEEEEEc-CC-
Q 018507 157 EDVEK-----------LFEIH-RS-LGNV------------------ELNLDLVAL-DVGETYEMRNDIVVRPFKT-HH- 202 (355)
Q Consensus 157 ~~l~~-----------~~~~~-~~-~~~~------------------~~~~~~~~l-~~g~~~~i~~g~~v~~~~~-~H- 202 (355)
+.+.. ...+. .. +... ........+ ++|+.+.++ |.+++++.+ +|
T Consensus 202 ~~~~~e~~~~g~~~~~r~~~~~g~~lp~~~~~~v~~~l~~~~~~g~~~~~~p~~~~~~dG~~l~lg-g~~l~vi~tPGHh 280 (658)
T 2cfu_A 202 EAAIKENVLAGNAMMRRATYQYGTQLPKGPQGQVDMAIGKGLARGPLSLLAPTRLIEGEGEDLVLD-GVPFTFQNTPGTE 280 (658)
T ss_dssp HHHC---CTTHHHHHHHHHHHTTTTSCBSTTSBCCCSSSSCCCCSCCCCCCCSEEECTTEEEEEET-TEEEEEEECTTSS
T ss_pred HHHhhhhhhhhhHHHHHHHHHhccCCChhhhhhhhhcccccccCCCccCCCCcEEEecCceEEEEC-CEEEEEEeCCCCC
Confidence 65421 10111 00 1000 000011334 578888996 999999988 67
Q ss_pred CCCCeEEEEE
Q 018507 203 VIPSQGYVIY 212 (355)
Q Consensus 203 ~~~~~g~~i~ 212 (355)
++++++|.+.
T Consensus 281 Tpg~i~~~~p 290 (658)
T 2cfu_A 281 SPAEMNIWLP 290 (658)
T ss_dssp SSSBEEEEET
T ss_pred CCCcEEEEEC
Confidence 8999998874
No 71
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=98.08 E-value=3.3e-09 Score=108.96 Aligned_cols=121 Identities=13% Similarity=0.103 Sum_probs=72.2
Q ss_pred ceEEEEe--CCcEEEEecCCCCcc-------------ccccCEEEeccCCccccCChHHHHHHhCcCCCCCCEEecChhh
Q 018507 91 HETCVII--PELKCAFDIGRCPTR-------------AIQQNFVFITHGHLDHIGGLPMYVASRGLYNLKPPTIFVPPSI 155 (355)
Q Consensus 91 ~~s~~~i--~~~~iLID~G~~~~~-------------~~~id~I~lTH~H~DHi~GL~~l~~~~~~~~~~~~~Iy~~~~~ 155 (355)
..+|+++ ++..+|||+|.+... ...|++||+||.|.||++|+..+...... ....++||+++..
T Consensus 132 ~~N~~lI~~~~~~iLIDtG~~~~~a~~~l~~i~~~~~~~~I~~IilTH~H~DH~gG~~~l~~~~~~-~~~~a~I~a~~~~ 210 (668)
T 2yhe_A 132 PANMTIIEGDSGLVLIDTLTTAETARAALDLYFQHRPKKPIVAVVYSHSHIDHFGGARGIIDEADV-KAGKVKVFAPSGF 210 (668)
Confidence 3456666 346799999966421 12589999999999999999988641000 0124568988875
Q ss_pred HHHH--HH---------HHHHH-H-hcCC-----------------C--c-CceeEEEcCCCCeeeecCCeEEEEEEc-C
Q 018507 156 KEDV--EK---------LFEIH-R-SLGN-----------------V--E-LNLDLVALDVGETYEMRNDIVVRPFKT-H 201 (355)
Q Consensus 156 ~~~l--~~---------~~~~~-~-~~~~-----------------~--~-~~~~~~~l~~g~~~~i~~g~~v~~~~~-~ 201 (355)
.+.. +. ...+. . .+.. . . .......+++|+++.++ |.+++++.+ +
T Consensus 211 ~e~~~~e~~~~g~~~~~r~~~~~G~~lp~~~~~~~~~~l~~~~~~~~~~~~~~P~~~~~~dg~~l~lg-g~~l~vi~tPG 289 (668)
T 2yhe_A 211 MEHAVSENILAGTAMARRGQYQSGVMVPRGAQAQVDSGLFKTTATNATNTLVAPNVLIEKPYERHTVD-GVELEFQLTLG 289 (668)
Confidence 3211 11 00000 0 0000 0 0 00112223467888886 888998888 4
Q ss_pred -CCCCCeEEEEEE
Q 018507 202 -HVIPSQGYVIYL 213 (355)
Q Consensus 202 -H~~~~~g~~i~~ 213 (355)
|+++++++.+..
T Consensus 290 ~Htpg~i~~~~p~ 302 (668)
T 2yhe_A 290 SEAPSDMNIYLPQ 302 (668)
Confidence 999998888753
No 72
>2i7t_A Cleavage and polyadenylation specificity factor 73 kDa subunit; metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination; 2.10A {Homo sapiens} SCOP: d.157.1.10 PDB: 2i7v_A
Probab=38.66 E-value=44 Score=31.85 Aligned_cols=26 Identities=23% Similarity=0.280 Sum_probs=24.2
Q ss_pred cCCCcHHHHHHHHHHcCCCeEEEEec
Q 018507 293 HGHTHLSEIIENAKWIRNKAVLLTHF 318 (355)
Q Consensus 293 ~~H~~~~~a~~~~~~~~~k~~vltH~ 318 (355)
..|....++.++++..++++++++|=
T Consensus 394 S~Had~~~l~~~i~~~~p~~v~~vHG 419 (459)
T 2i7t_A 394 SAHTDYQQTSEFIRALKPPHVILVHG 419 (459)
T ss_dssp SCCCCHHHHHHHHHHHCCSEEEEESS
T ss_pred cccCCHHHHHHHHHhcCCCeEEEeCC
Confidence 57999999999999999999999994
No 73
>2xr1_A Cleavage and polyadenylation specificity factor 1 subunit; hydrolase, metallo-beta-lactamase, beta-CAsp, RNA processing; 2.59A {Methanosarcina mazei}
Probab=37.49 E-value=44 Score=33.57 Aligned_cols=57 Identities=16% Similarity=0.173 Sum_probs=39.4
Q ss_pred cCCCcHHHHHHHHHHcC--CCeEEEEecCCCCChhHHHHHHHHhcccccCceeeccccccccc
Q 018507 293 HGHTHLSEIIENAKWIR--NKAVLLTHFSSRYHIEDIRQAVLKLQSKVSAKVVPLTEGFKSVY 353 (355)
Q Consensus 293 ~~H~~~~~a~~~~~~~~--~k~~vltH~s~~~~~~~l~~~~~~~~~~~~~~v~~a~dGl~~~~ 353 (355)
.+|...++..++++.++ +++++++|=..+ .+....+.+.+++..++.+...|-.+++
T Consensus 581 SgHad~~eL~~~i~~~~~~P~~vi~vHGe~~----~~~~~a~~~~~~~g~~~~~p~~g~~~~l 639 (640)
T 2xr1_A 581 SGHSDRRQLMEYVKRMQPRPERVFTEHGDEK----ACVDLASSVYKKLKIETRALTNLETVRL 639 (640)
T ss_dssp SCSCCHHHHHHHHHTCBSCCSEEEEESSCHH----HHHHHHHHHHHHHCCEEEECCTTCEEEC
T ss_pred cccCCHHHHHHHHHHhccCCCEEEEECCCHH----HHHHHHHHHHHHcCCeEEeCCCCCEEEe
Confidence 58999999999999998 999999993322 2333333332334557777777766543
No 74
>2ycb_A Beta-CAsp RNAse, cleavage and polyadenylation specificity factor; hydrolase, KH, metallo-beta-lactamase; 3.10A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=34.38 E-value=49 Score=33.17 Aligned_cols=56 Identities=14% Similarity=0.107 Sum_probs=38.3
Q ss_pred cCCCcHHHHHHHHHHcC--CCeEEEEecCCCCChhHHHHHHHHhcccccCceeecccccccc
Q 018507 293 HGHTHLSEIIENAKWIR--NKAVLLTHFSSRYHIEDIRQAVLKLQSKVSAKVVPLTEGFKSV 352 (355)
Q Consensus 293 ~~H~~~~~a~~~~~~~~--~k~~vltH~s~~~~~~~l~~~~~~~~~~~~~~v~~a~dGl~~~ 352 (355)
.+|...++..++++.++ |++++++|=..+ .+....+.+..++..++.+..+|-.++
T Consensus 577 SgHad~~eL~~~i~~~~~~Pk~vi~vHGe~~----~~~~~a~~~~~~~g~~~~~p~~g~~~~ 634 (636)
T 2ycb_A 577 SGHSDRRQLMEYVKRISPKPEKILLCHGDNY----KTLDLASSIYRTYRIETKTPLNLETVR 634 (636)
T ss_dssp CSSCCHHHHHHHHHSCSSCCSEEEEESSCHH----HHHHHHHHHHHHHCCEEECCCTTCEEE
T ss_pred ceeCCHHHHHHHHHHhccCCCEEEEECCCHH----HHHHHHHHHHHHcCCcEEeCCCCCEEE
Confidence 58999999999999998 999999994332 222333333233345677777776554
No 75
>3af5_A Putative uncharacterized protein PH1404; archaeal CPSF, beta-CAsp family, KH domain, ribonuclease, ME beta-lactamase superfamily, archaea; 2.60A {Pyrococcus horikoshii} PDB: 3af6_A*
Probab=33.16 E-value=56 Score=32.90 Aligned_cols=57 Identities=11% Similarity=0.092 Sum_probs=38.2
Q ss_pred hcCCCcHHHHHHHHHHcC--CCeEEEEecCCCCChhHHHHHHHHhcccccCceeecccccccc
Q 018507 292 QHGHTHLSEIIENAKWIR--NKAVLLTHFSSRYHIEDIRQAVLKLQSKVSAKVVPLTEGFKSV 352 (355)
Q Consensus 292 ~~~H~~~~~a~~~~~~~~--~k~~vltH~s~~~~~~~l~~~~~~~~~~~~~~v~~a~dGl~~~ 352 (355)
-.+|...++..++++.++ |++++++|=..+ .+....+.+.+++.-++.+..+|-.+.
T Consensus 591 ~SgHad~~eL~~~i~~~~~~P~~vi~vHGe~~----~~~~la~~~~~~~g~~~~~p~~g~~~~ 649 (651)
T 3af5_A 591 FSGHADRRELMNYVAKVRPRPERIITVHGEPQ----KCLDLATSIHRKFGISTRAPNNLDTIR 649 (651)
T ss_dssp GCSSCCHHHHHHHHHHCBSCCSEEEEESSCHH----HHHHHHHHHHHHHCCEEECCCTTCEEE
T ss_pred ccCcCCHHHHHHHHHHhhcCCCEEEEEcCCHH----HHHHHHHHHHHhcCCeEEECCCCCEEE
Confidence 358999999999999998 999999994332 222222322233344677777776554
No 76
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=25.17 E-value=2.9e+02 Score=22.76 Aligned_cols=62 Identities=8% Similarity=-0.112 Sum_probs=36.3
Q ss_pred EEEEcCCCCCccCCccccccCCCCEEEEecccCCCcccHHHHhhcCCCcHHHHHHHHHHcCCCeEEEE
Q 018507 249 VAFTGDTTSEFMLNPRNADALRAKILITEATFLDDEMSIEHAQQHGHTHLSEIIENAKWIRNKAVLLT 316 (355)
Q Consensus 249 i~y~gDt~~~~~~~~~~~~~~~~d~Li~e~t~~~~~~~~~~a~~~~H~~~~~a~~~~~~~~~k~~vlt 316 (355)
.++.+|.. +. ..+.+.++|++|+-+....... .+......-.....+++.+++.+.++++++
T Consensus 68 ~~~~~Dl~-~~----~~~~~~~~D~vi~~ag~~~~~~-~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~ 129 (236)
T 3e8x_A 68 DIVVANLE-ED----FSHAFASIDAVVFAAGSGPHTG-ADKTILIDLWGAIKTIQEAEKRGIKRFIMV 129 (236)
T ss_dssp EEEECCTT-SC----CGGGGTTCSEEEECCCCCTTSC-HHHHHHTTTHHHHHHHHHHHHHTCCEEEEE
T ss_pred eEEEcccH-HH----HHHHHcCCCEEEECCCCCCCCC-ccccchhhHHHHHHHHHHHHHcCCCEEEEE
Confidence 56778887 21 2245668999999886553221 122222222234556777777777777764
No 77
>2az4_A Hypothetical protein EF2904; structural genomics, PSI, protein STR initiative, midwest center for structural genomics, MCSG, U function; 2.00A {Enterococcus faecalis} SCOP: d.157.1.10
Probab=22.04 E-value=68 Score=30.04 Aligned_cols=49 Identities=12% Similarity=0.110 Sum_probs=35.9
Q ss_pred cCCCcHHHHHHHHHHcCCCeEEEEecCCCCChhHHHHHHHHhcccccCceeecccccccc
Q 018507 293 HGHTHLSEIIENAKWIRNKAVLLTHFSSRYHIEDIRQAVLKLQSKVSAKVVPLTEGFKSV 352 (355)
Q Consensus 293 ~~H~~~~~a~~~~~~~~~k~~vltH~s~~~~~~~l~~~~~~~~~~~~~~v~~a~dGl~~~ 352 (355)
.+|...++..++++..+|+.++++|=..+.-. +....++.+..+|-.+.
T Consensus 380 SgHa~~~eL~~~~~~~~Pk~~ipvHGe~~~~~-----------~~~~~~~~~~~~g~~~~ 428 (429)
T 2az4_A 380 SGHAIPEDLDKIIALIEPQVLVPIHTLKPEKL-----------ENPYGERILPERGEQIV 428 (429)
T ss_dssp CSSCCHHHHHHHHHHHCCSEEEEESCSCGGGC-----------CCTTSEECCCCTTCEEE
T ss_pred cCCCCHHHHHHHHHhhCCCEEEECCCCchhhh-----------hcCCCcEEEeCCCcEEe
Confidence 58999999999999999999999998654221 12234677777776543
No 78
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A*
Probab=21.30 E-value=1.1e+02 Score=30.02 Aligned_cols=59 Identities=14% Similarity=0.035 Sum_probs=37.9
Q ss_pred hcCCCcHHHHHHHHHHcCCCeEEEEecCCCCChhHHHHHHHHhccccc-Cceeeccccccccc
Q 018507 292 QHGHTHLSEIIENAKWIRNKAVLLTHFSSRYHIEDIRQAVLKLQSKVS-AKVVPLTEGFKSVY 353 (355)
Q Consensus 292 ~~~H~~~~~a~~~~~~~~~k~~vltH~s~~~~~~~l~~~~~~~~~~~~-~~v~~a~dGl~~~~ 353 (355)
-.+|...++..++++.++|+.++++|=..+.- ..+.+.+++. .++ .++....+|-.+.+
T Consensus 380 ~SgHa~~~eL~~~i~~~~Pk~vipvHGe~~~~-~~~~~~~~~~--g~~~~~~~~~~~G~~~~l 439 (562)
T 3bk2_A 380 ASGHASQEELKLILNLTTPRFFLPWHGEVRHQ-MNFKWLAESM--SRPPEKTLIGENGAVYRL 439 (562)
T ss_dssp CCSSCCHHHHHHHHHHHCCSEEEEESBCHHHH-HHHHHHHHTS--SSCCSEECCCCTTEEEEE
T ss_pred EeCCCCHHHHHHHHHhcCCCEEEEEcCCHHHH-HHHHHHHHHc--CCCcceEEECCCCCEEEE
Confidence 36899999999999999999999999544321 1122222221 122 25666677765554
Done!