Query 018508
Match_columns 355
No_of_seqs 227 out of 1533
Neff 6.0
Searched_HMMs 29240
Date Mon Mar 25 16:21:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018508.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018508hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qz6_A HPCH/HPAI aldolase; str 100.0 2.8E-55 9.6E-60 416.0 28.9 254 72-328 2-259 (261)
2 2v5j_A 2,4-dihydroxyhept-2-ENE 100.0 2.1E-54 7.3E-59 415.2 30.4 252 72-324 26-277 (287)
3 1dxe_A 2-dehydro-3-deoxy-galac 100.0 5.2E-54 1.8E-58 405.7 30.1 248 74-323 8-255 (256)
4 2vws_A YFAU, 2-keto-3-deoxy su 100.0 4E-54 1.4E-58 409.0 28.5 252 72-324 5-256 (267)
5 1izc_A Macrophomate synthase i 100.0 1.1E-49 3.7E-54 390.5 29.2 249 72-327 24-296 (339)
6 1sgj_A Citrate lyase, beta sub 100.0 3.8E-35 1.3E-39 280.3 17.4 203 86-316 9-234 (284)
7 2xz9_A Phosphoenolpyruvate-pro 100.0 3.1E-34 1.1E-38 279.5 18.7 211 84-315 17-287 (324)
8 1u5h_A CITE; TIM barrel, struc 100.0 4.1E-33 1.4E-37 265.4 18.9 203 88-326 10-235 (273)
9 3qll_A Citrate lyase; beta bar 100.0 2.1E-32 7.1E-37 265.8 22.0 212 86-326 46-282 (316)
10 3qqw_A Putative citrate lyase; 100.0 4.8E-31 1.7E-35 257.7 15.9 218 87-327 25-282 (332)
11 2hwg_A Phosphoenolpyruvate-pro 100.0 3.2E-30 1.1E-34 267.5 19.5 210 85-315 267-536 (575)
12 2wqd_A Phosphoenolpyruvate-pro 100.0 2.1E-30 7.2E-35 268.7 17.7 210 85-315 269-538 (572)
13 3r4i_A Citrate lyase; TIM beta 100.0 7.2E-30 2.5E-34 250.1 17.3 217 85-324 22-278 (339)
14 3oyz_A Malate synthase; TIM ba 99.9 1.4E-27 4.8E-32 238.6 12.3 208 88-315 18-271 (433)
15 2ols_A Phosphoenolpyruvate syn 99.9 1.9E-24 6.5E-29 232.0 19.1 206 85-314 483-786 (794)
16 1vbg_A Pyruvate,orthophosphate 99.8 1.6E-18 5.4E-23 187.2 11.9 212 85-315 535-870 (876)
17 3cux_A Malate synthase; TIM ba 99.7 5.5E-18 1.9E-22 173.6 11.6 210 84-315 85-376 (528)
18 3cuz_A MSA, malate synthase A; 99.7 1.4E-17 4.6E-22 170.8 14.0 212 85-317 89-380 (532)
19 1a3w_A Pyruvate kinase; allost 99.7 6.1E-18 2.1E-22 172.7 9.4 128 147-309 196-336 (500)
20 1kbl_A PPDK, pyruvate phosphat 99.7 2.4E-16 8.3E-21 170.2 18.1 212 85-315 531-864 (873)
21 1h6z_A Pyruvate phosphate diki 99.7 3.6E-15 1.2E-19 161.2 21.3 212 85-315 558-890 (913)
22 2x0s_A Pyruvate phosphate diki 99.6 3.5E-15 1.2E-19 162.3 16.3 207 85-313 558-888 (913)
23 1p7t_A MSG, malate synthase G; 99.6 7.1E-15 2.4E-19 153.4 12.7 197 94-311 251-543 (731)
24 1e0t_A Pyruvate kinase, PK; ph 99.6 1.5E-14 5.3E-19 146.6 13.2 136 140-309 165-316 (470)
25 2e28_A Pyruvate kinase, PK; al 99.6 1.6E-14 5.6E-19 150.1 13.4 135 140-309 166-317 (587)
26 3gr4_A Pyruvate kinase isozyme 99.4 7.1E-13 2.4E-17 136.3 14.2 127 148-309 246-385 (550)
27 3hqn_D Pyruvate kinase, PK; TI 99.4 9.1E-13 3.1E-17 134.3 14.0 127 148-309 196-335 (499)
28 3qtg_A Pyruvate kinase, PK; TI 99.4 1.8E-12 6E-17 130.9 13.4 135 140-309 174-326 (461)
29 3khd_A Pyruvate kinase; malari 99.3 4.7E-12 1.6E-16 129.4 12.7 126 149-309 221-360 (520)
30 3gg8_A Pyruvate kinase; malari 99.3 1.8E-11 6E-16 125.1 12.6 126 149-309 212-351 (511)
31 3t05_A Pyruvate kinase, PK; te 99.3 1.7E-11 5.7E-16 127.6 12.2 127 148-309 197-336 (606)
32 4drs_A Pyruvate kinase; glycol 98.7 1E-07 3.5E-12 97.8 13.1 132 150-309 222-366 (526)
33 1rd5_A Tryptophan synthase alp 98.1 5E-05 1.7E-09 70.6 14.4 195 76-309 9-234 (262)
34 2ekc_A AQ_1548, tryptophan syn 97.8 0.0017 5.9E-08 60.6 19.2 187 82-309 14-238 (262)
35 1qop_A Tryptophan synthase alp 97.7 0.00062 2.1E-08 63.8 14.0 189 81-309 13-238 (268)
36 1geq_A Tryptophan synthase alp 97.6 0.0011 3.7E-08 60.6 13.7 186 82-308 2-223 (248)
37 3inp_A D-ribulose-phosphate 3- 97.4 0.0003 1E-08 65.7 8.2 185 97-325 44-242 (246)
38 1ujp_A Tryptophan synthase alp 97.4 0.0019 6.6E-08 60.9 13.5 204 81-327 12-254 (271)
39 3ovp_A Ribulose-phosphate 3-ep 97.4 0.0002 6.8E-09 65.9 6.2 169 97-307 21-199 (228)
40 3nav_A Tryptophan synthase alp 97.4 0.011 3.7E-07 55.8 17.8 195 74-309 5-241 (271)
41 3vnd_A TSA, tryptophan synthas 97.3 0.0068 2.3E-07 57.1 15.4 188 81-309 14-239 (267)
42 1tqj_A Ribulose-phosphate 3-ep 96.8 0.0031 1.1E-07 57.8 8.3 188 97-325 21-220 (230)
43 3ih1_A Methylisocitrate lyase; 96.8 0.38 1.3E-05 46.1 22.9 204 73-325 18-264 (305)
44 1rpx_A Protein (ribulose-phosp 96.8 0.0047 1.6E-07 55.8 9.1 187 97-325 27-226 (230)
45 1yad_A Regulatory protein TENI 96.7 0.29 1E-05 43.5 21.5 156 98-308 34-195 (221)
46 1xi3_A Thiamine phosphate pyro 96.7 0.12 4.1E-06 45.4 17.4 155 97-308 30-193 (215)
47 3o63_A Probable thiamine-phosp 96.6 0.24 8.1E-06 45.8 19.4 162 97-309 47-223 (243)
48 4fo4_A Inosine 5'-monophosphat 96.5 0.25 8.4E-06 48.4 20.1 219 36-307 9-242 (366)
49 3tha_A Tryptophan synthase alp 96.5 0.017 5.8E-07 54.0 11.3 194 74-309 5-231 (252)
50 3qja_A IGPS, indole-3-glycerol 96.5 0.18 6E-06 47.4 18.2 190 74-308 41-245 (272)
51 3eoo_A Methylisocitrate lyase; 96.4 0.68 2.3E-05 44.1 22.5 205 73-325 11-260 (298)
52 3ctl_A D-allulose-6-phosphate 96.4 0.0042 1.4E-07 57.2 6.2 186 97-325 17-216 (231)
53 3khj_A Inosine-5-monophosphate 96.4 0.13 4.6E-06 50.1 16.9 218 36-307 8-238 (361)
54 2fli_A Ribulose-phosphate 3-ep 96.3 0.0078 2.7E-07 53.7 7.1 173 97-308 20-201 (220)
55 1h1y_A D-ribulose-5-phosphate 96.3 0.007 2.4E-07 54.9 6.7 170 97-308 23-204 (228)
56 3odm_A Pepcase, PEPC, phosphoe 96.1 0.059 2E-06 55.3 13.3 159 105-279 63-256 (560)
57 2tps_A Protein (thiamin phosph 96.0 0.5 1.7E-05 41.8 17.5 160 98-308 36-203 (227)
58 3tsm_A IGPS, indole-3-glycerol 96.0 0.55 1.9E-05 44.1 18.3 168 95-308 80-252 (272)
59 3cu2_A Ribulose-5-phosphate 3- 95.9 0.016 5.4E-07 53.6 7.4 190 98-324 31-234 (237)
60 3f4w_A Putative hexulose 6 pho 95.8 0.2 6.8E-06 44.1 14.0 94 83-179 53-157 (211)
61 3lye_A Oxaloacetate acetyl hyd 95.8 1.5 5E-05 42.0 22.5 212 71-327 11-270 (307)
62 1ka9_F Imidazole glycerol phos 95.5 0.77 2.6E-05 41.3 17.1 82 97-179 35-121 (252)
63 3khj_A Inosine-5-monophosphate 95.5 0.12 4.3E-06 50.4 12.3 79 82-163 93-172 (361)
64 3ffs_A Inosine-5-monophosphate 95.2 0.19 6.4E-06 49.9 12.7 78 83-163 133-211 (400)
65 3igs_A N-acetylmannosamine-6-p 95.0 0.44 1.5E-05 43.5 13.8 78 83-163 69-155 (232)
66 2qiw_A PEP phosphonomutase; st 95.0 2.3 7.7E-05 39.5 21.0 204 74-324 10-252 (255)
67 1s2w_A Phosphoenolpyruvate pho 95.0 2.6 8.8E-05 40.0 21.8 208 74-325 9-259 (295)
68 3nl6_A Thiamine biosynthetic b 95.0 1.7 5.9E-05 44.5 19.4 180 97-324 29-231 (540)
69 3q58_A N-acetylmannosamine-6-p 94.8 0.4 1.4E-05 43.7 13.0 78 83-163 69-155 (229)
70 3q58_A N-acetylmannosamine-6-p 94.8 0.61 2.1E-05 42.5 13.9 182 73-307 7-212 (229)
71 3igs_A N-acetylmannosamine-6-p 94.5 1.6 5.5E-05 39.7 16.2 158 98-308 41-213 (232)
72 3ffs_A Inosine-5-monophosphate 94.5 0.91 3.1E-05 45.0 15.4 124 147-307 146-277 (400)
73 3fa4_A 2,3-dimethylmalate lyas 94.5 3.5 0.00012 39.3 23.2 212 72-327 5-262 (302)
74 1vc4_A Indole-3-glycerol phosp 94.4 1.2 4.2E-05 41.0 15.2 188 73-308 34-239 (254)
75 3f4w_A Putative hexulose 6 pho 94.3 0.76 2.6E-05 40.3 13.2 116 149-307 69-189 (211)
76 1xg4_A Probable methylisocitra 94.3 3.7 0.00013 38.9 23.9 206 73-325 6-256 (295)
77 3jr2_A Hexulose-6-phosphate sy 94.2 0.94 3.2E-05 40.4 13.8 94 83-179 59-163 (218)
78 4fxs_A Inosine-5'-monophosphat 94.2 0.46 1.6E-05 48.2 12.8 79 83-164 218-300 (496)
79 3kht_A Response regulator; PSI 94.1 0.68 2.3E-05 36.9 11.4 103 74-179 19-125 (144)
80 1y0e_A Putative N-acetylmannos 94.0 1.8 6.3E-05 38.1 15.2 175 97-325 27-220 (223)
81 1thf_D HISF protein; thermophI 94.0 2.1 7.1E-05 38.4 15.8 83 97-179 34-120 (253)
82 2p10_A MLL9387 protein; putati 93.8 4.5 0.00016 38.2 18.0 215 72-325 16-281 (286)
83 1zlp_A PSR132, petal death pro 93.8 4.9 0.00017 38.5 24.9 203 73-325 28-278 (318)
84 1wa3_A 2-keto-3-deoxy-6-phosph 93.8 3.1 0.00011 36.1 16.4 169 78-309 5-182 (205)
85 2qiw_A PEP phosphonomutase; st 93.8 0.33 1.1E-05 45.2 10.1 87 96-182 96-206 (255)
86 4fo4_A Inosine 5'-monophosphat 93.7 0.34 1.2E-05 47.4 10.5 78 83-163 95-176 (366)
87 4e7p_A Response regulator; DNA 93.6 1.8 6.1E-05 34.8 13.3 105 74-180 34-138 (150)
88 3ajx_A 3-hexulose-6-phosphate 93.6 1.5 5.2E-05 38.2 13.8 159 100-308 20-189 (207)
89 1h5y_A HISF; histidine biosynt 93.6 3.6 0.00012 36.3 18.1 83 95-177 35-121 (253)
90 2qjg_A Putative aldolase MJ040 93.6 0.52 1.8E-05 43.2 11.1 156 97-308 49-240 (273)
91 3b8i_A PA4872 oxaloacetate dec 93.3 0.49 1.7E-05 44.9 10.5 119 98-251 102-242 (287)
92 2yw3_A 4-hydroxy-2-oxoglutarat 93.2 4.4 0.00015 36.0 17.1 150 97-308 29-182 (207)
93 1k68_A Phytochrome response re 93.1 1.5 5.1E-05 34.1 11.8 104 74-179 16-128 (140)
94 1yxy_A Putative N-acetylmannos 93.1 4.5 0.00016 35.9 21.0 194 74-325 8-231 (234)
95 2hjp_A Phosphonopyruvate hydro 93.0 6.1 0.00021 37.3 24.5 208 74-325 5-256 (290)
96 3eoo_A Methylisocitrate lyase; 93.0 0.81 2.8E-05 43.6 11.5 137 98-278 103-262 (298)
97 3fok_A Uncharacterized protein 93.0 0.8 2.7E-05 43.9 11.4 136 98-273 133-295 (307)
98 3eul_A Possible nitrate/nitrit 92.8 2 6.8E-05 34.5 12.4 104 74-179 29-132 (152)
99 2z6i_A Trans-2-enoyl-ACP reduc 92.8 6.2 0.00021 37.4 17.6 183 74-308 3-194 (332)
100 4avf_A Inosine-5'-monophosphat 92.8 1.4 4.9E-05 44.4 13.7 78 83-163 216-297 (490)
101 3ih1_A Methylisocitrate lyase; 92.6 0.91 3.1E-05 43.4 11.3 137 98-278 109-266 (305)
102 3b2n_A Uncharacterized protein 92.5 2.4 8.2E-05 33.2 12.2 105 74-180 17-121 (133)
103 3s9z_A Malate synthase G; inhi 92.4 0.18 6.1E-06 53.0 6.4 71 160-250 394-466 (741)
104 3hdg_A Uncharacterized protein 92.4 2.9 9.9E-05 32.7 12.5 103 74-180 21-123 (137)
105 2nv1_A Pyridoxal biosynthesis 92.3 2.4 8.3E-05 39.7 13.9 70 92-164 27-107 (305)
106 3eod_A Protein HNR; response r 92.3 1.5 5.2E-05 34.0 10.7 104 74-180 21-124 (130)
107 3fa4_A 2,3-dimethylmalate lyas 92.2 1.1 3.9E-05 42.7 11.4 122 98-250 100-246 (302)
108 2w6r_A Imidazole glycerol phos 92.1 2.7 9.3E-05 38.0 13.6 71 96-166 33-105 (266)
109 1y0e_A Putative N-acetylmannos 92.1 1 3.6E-05 39.7 10.5 68 94-163 76-145 (223)
110 2ze3_A DFA0005; organic waste 92.1 1.3 4.4E-05 41.7 11.5 118 98-250 97-239 (275)
111 3cg0_A Response regulator rece 91.7 3.9 0.00013 31.9 12.5 101 74-179 23-125 (140)
112 3b8i_A PA4872 oxaloacetate dec 91.7 9 0.00031 36.1 22.2 205 74-327 11-254 (287)
113 1pii_A N-(5'phosphoribosyl)ant 91.4 2.8 9.6E-05 42.1 13.8 67 93-163 117-183 (452)
114 3lg3_A Isocitrate lyase; conse 91.3 13 0.00044 37.2 21.0 39 72-112 50-91 (435)
115 3hv2_A Response regulator/HD d 91.1 5 0.00017 32.1 13.4 102 74-179 28-130 (153)
116 1srr_A SPO0F, sporulation resp 91.0 4.2 0.00014 31.1 12.8 102 74-179 17-118 (124)
117 3lye_A Oxaloacetate acetyl hyd 91.0 1.9 6.4E-05 41.2 11.6 83 98-180 108-214 (307)
118 3cnb_A DNA-binding response re 90.9 3.4 0.00012 32.2 11.5 103 74-179 22-127 (143)
119 3gt7_A Sensor protein; structu 90.8 4.3 0.00015 32.8 12.3 103 74-179 21-124 (154)
120 3jte_A Response regulator rece 90.8 5 0.00017 31.5 12.7 102 74-179 17-120 (143)
121 3i4e_A Isocitrate lyase; struc 90.7 15 0.0005 36.8 23.0 38 73-112 54-91 (439)
122 1xg4_A Probable methylisocitra 90.6 1.1 3.8E-05 42.5 9.5 85 98-182 99-205 (295)
123 2zay_A Response regulator rece 90.5 2.9 0.0001 33.1 10.8 103 74-179 22-125 (147)
124 1dz3_A Stage 0 sporulation pro 90.5 2.8 9.7E-05 32.5 10.6 104 74-179 16-120 (130)
125 1k66_A Phytochrome response re 90.4 2 6.9E-05 33.8 9.7 103 74-179 20-135 (149)
126 1zgz_A Torcad operon transcrip 90.4 4.7 0.00016 30.6 11.9 101 74-179 16-116 (122)
127 3ilh_A Two component response 90.3 5.4 0.00018 31.2 14.5 107 74-181 23-138 (146)
128 3hzh_A Chemotaxis response reg 90.3 5.9 0.0002 32.0 12.8 103 74-179 50-154 (157)
129 3tsm_A IGPS, indole-3-glycerol 90.2 3.3 0.00011 38.8 12.3 67 93-163 129-195 (272)
130 1jqn_A Pepcase, PEPC, phosphoe 90.1 0.55 1.9E-05 51.0 7.7 95 158-279 469-574 (883)
131 3usb_A Inosine-5'-monophosphat 90.1 2.1 7.1E-05 43.5 11.6 76 84-163 244-324 (511)
132 3r2g_A Inosine 5'-monophosphat 90.1 1.2 4.1E-05 43.5 9.5 89 72-163 76-168 (361)
133 3lte_A Response regulator; str 90.1 4.3 0.00015 31.4 11.2 104 74-180 20-123 (132)
134 1jqo_A Phosphoenolpyruvate car 90.0 0.65 2.2E-05 50.8 8.2 102 151-279 519-634 (970)
135 2qjg_A Putative aldolase MJ040 90.0 4.1 0.00014 37.1 12.6 85 96-180 102-202 (273)
136 2h6r_A Triosephosphate isomera 90.0 0.65 2.2E-05 41.8 7.0 122 150-308 75-202 (219)
137 3w01_A Heptaprenylglyceryl pho 90.0 0.79 2.7E-05 42.3 7.6 71 95-172 25-95 (235)
138 1eep_A Inosine 5'-monophosphat 89.7 3.9 0.00013 39.9 13.0 65 96-163 155-221 (404)
139 3jr2_A Hexulose-6-phosphate sy 89.7 1.2 4.1E-05 39.7 8.5 183 85-308 7-197 (218)
140 1i3c_A Response regulator RCP1 89.7 6.7 0.00023 31.3 12.9 104 74-179 22-134 (149)
141 3qja_A IGPS, indole-3-glycerol 89.5 2.4 8.3E-05 39.6 10.8 77 83-164 113-189 (272)
142 2v82_A 2-dehydro-3-deoxy-6-pho 89.5 10 0.00034 33.0 19.7 152 98-307 24-178 (212)
143 1qkk_A DCTD, C4-dicarboxylate 89.3 5.6 0.00019 31.8 11.7 101 74-179 17-118 (155)
144 1p0k_A Isopentenyl-diphosphate 89.3 4.6 0.00016 38.5 12.8 83 83-165 116-210 (349)
145 2ze3_A DFA0005; organic waste 88.8 15 0.00052 34.3 22.4 86 74-163 8-111 (275)
146 1xhf_A DYE resistance, aerobic 88.7 6.4 0.00022 29.9 13.1 101 74-179 17-117 (123)
147 3iwp_A Copper homeostasis prot 88.7 10 0.00035 35.9 14.4 177 89-306 42-239 (287)
148 1vhc_A Putative KHG/KDPG aldol 88.7 2.4 8.2E-05 38.4 9.8 122 130-306 13-138 (224)
149 1ep3_A Dihydroorotate dehydrog 88.6 5.6 0.00019 36.7 12.6 81 84-164 98-196 (311)
150 2y88_A Phosphoribosyl isomeras 88.6 0.96 3.3E-05 40.5 7.1 84 95-179 32-120 (244)
151 3heb_A Response regulator rece 88.6 4.5 0.00015 32.3 10.6 103 74-179 18-132 (152)
152 4e38_A Keto-hydroxyglutarate-a 88.5 2.1 7.2E-05 39.2 9.4 126 127-306 27-155 (232)
153 3m6m_D Sensory/regulatory prot 88.5 8 0.00027 30.7 13.4 104 74-180 28-134 (143)
154 1tmy_A CHEY protein, TMY; chem 88.2 6.9 0.00023 29.6 12.3 103 74-179 16-118 (120)
155 3vav_A 3-methyl-2-oxobutanoate 88.2 9.8 0.00034 35.7 13.9 105 71-177 16-140 (275)
156 2qr3_A Two-component system re 88.2 6.4 0.00022 30.6 11.1 102 74-179 17-123 (140)
157 1zlp_A PSR132, petal death pro 88.2 2.5 8.5E-05 40.6 10.0 121 98-250 121-264 (318)
158 3gl9_A Response regulator; bet 88.2 7.5 0.00026 29.9 11.5 102 75-179 17-119 (122)
159 3vzx_A Heptaprenylglyceryl pho 88.1 1.4 4.7E-05 40.4 7.8 69 96-171 21-89 (228)
160 3hdv_A Response regulator; PSI 88.0 4.5 0.00015 31.5 10.1 104 74-180 21-125 (136)
161 3bo9_A Putative nitroalkan dio 87.8 15 0.00052 34.7 15.3 69 86-163 79-150 (326)
162 2qzj_A Two-component response 87.7 5.3 0.00018 31.4 10.4 100 74-179 18-118 (136)
163 1ypf_A GMP reductase; GUAC, pu 87.6 4 0.00014 38.9 11.1 64 98-163 110-176 (336)
164 1vrd_A Inosine-5'-monophosphat 87.5 2.5 8.5E-05 42.3 10.1 65 96-163 239-305 (494)
165 1s2w_A Phosphoenolpyruvate pho 87.5 6.4 0.00022 37.2 12.3 83 98-180 99-207 (295)
166 2z6i_A Trans-2-enoyl-ACP reduc 87.4 8.9 0.00031 36.2 13.5 59 96-163 78-136 (332)
167 1jbe_A Chemotaxis protein CHEY 87.4 8.1 0.00028 29.5 11.8 103 74-179 18-122 (128)
168 2a9o_A Response regulator; ess 87.4 7.6 0.00026 29.1 12.7 101 74-179 15-115 (120)
169 1tqx_A D-ribulose-5-phosphate 87.2 1 3.5E-05 41.1 6.4 183 97-324 22-219 (227)
170 2qxy_A Response regulator; reg 87.2 7.3 0.00025 30.5 10.9 99 74-179 18-118 (142)
171 2gkg_A Response regulator homo 87.1 3.8 0.00013 31.1 8.9 102 74-179 19-122 (127)
172 1viz_A PCRB protein homolog; s 87.0 15 0.00051 33.6 14.2 69 95-170 22-90 (240)
173 1wbh_A KHG/KDPG aldolase; lyas 87.0 4.4 0.00015 36.3 10.5 123 129-306 11-137 (214)
174 2hjp_A Phosphonopyruvate hydro 86.9 3.1 0.00011 39.3 9.8 120 98-250 95-242 (290)
175 3nhm_A Response regulator; pro 86.9 3.6 0.00012 31.8 8.8 101 74-179 18-119 (133)
176 2gjl_A Hypothetical protein PA 86.8 21 0.0007 33.5 16.3 188 73-308 5-204 (328)
177 1qo2_A Molecule: N-((5-phospho 86.7 2.2 7.7E-05 38.2 8.4 76 95-175 32-115 (241)
178 2qr6_A IMP dehydrogenase/GMP r 86.7 22 0.00075 34.3 16.1 146 120-307 140-308 (393)
179 3kcn_A Adenylate cyclase homol 86.7 7.7 0.00026 30.9 11.0 101 74-179 18-120 (151)
180 3crn_A Response regulator rece 86.6 9.7 0.00033 29.5 12.1 102 74-179 17-118 (132)
181 1a04_A Nitrate/nitrite respons 86.5 12 0.0004 31.8 12.7 103 74-179 19-122 (215)
182 3cfy_A Putative LUXO repressor 86.5 9.7 0.00033 29.9 11.3 102 74-179 18-119 (137)
183 1vzw_A Phosphoribosyl isomeras 86.3 2.8 9.4E-05 37.5 8.8 83 95-178 33-120 (244)
184 2qsj_A DNA-binding response re 86.3 4.6 0.00016 32.2 9.4 103 74-180 17-122 (154)
185 1jcn_A Inosine monophosphate d 86.3 7.2 0.00025 39.2 12.7 64 96-163 257-323 (514)
186 1zh2_A KDP operon transcriptio 86.2 8.9 0.0003 28.8 10.9 101 74-179 15-115 (121)
187 1mb3_A Cell division response 86.2 9 0.00031 29.0 10.7 103 74-179 15-118 (124)
188 1to3_A Putative aldolase YIHT; 86.2 6.2 0.00021 37.3 11.5 127 97-253 112-264 (304)
189 1dbw_A Transcriptional regulat 86.0 9.9 0.00034 29.1 12.8 102 74-179 17-118 (126)
190 3usb_A Inosine-5'-monophosphat 85.9 5.1 0.00018 40.6 11.4 175 97-307 197-390 (511)
191 1w8s_A FBP aldolase, fructose- 85.7 8.5 0.00029 35.4 11.9 181 98-327 46-252 (263)
192 4a29_A Engineered retro-aldol 85.6 12 0.00039 35.0 12.7 67 93-163 113-179 (258)
193 3glc_A Aldolase LSRF; TIM barr 85.6 2.7 9.1E-05 39.9 8.5 119 98-247 130-261 (295)
194 4fxs_A Inosine-5'-monophosphat 85.5 4.3 0.00015 41.0 10.6 125 146-307 232-365 (496)
195 3bo9_A Putative nitroalkan dio 85.5 25 0.00084 33.2 18.8 186 72-308 15-208 (326)
196 3n53_A Response regulator rece 85.4 1.5 5.1E-05 34.7 5.8 99 74-179 17-119 (140)
197 2qvg_A Two component response 85.3 5.2 0.00018 31.3 9.1 103 74-179 21-132 (143)
198 1mxs_A KDPG aldolase; 2-keto-3 85.1 5 0.00017 36.3 9.9 124 127-306 19-147 (225)
199 3lua_A Response regulator rece 85.0 5 0.00017 31.4 8.9 100 74-179 18-124 (140)
200 2gjl_A Hypothetical protein PA 85.0 9.8 0.00034 35.7 12.3 69 86-163 71-144 (328)
201 3t6k_A Response regulator rece 84.8 12 0.00043 29.2 12.3 103 74-179 18-121 (136)
202 1yxy_A Putative N-acetylmannos 84.4 6.2 0.00021 35.0 10.1 65 95-161 90-157 (234)
203 2qr6_A IMP dehydrogenase/GMP r 84.3 15 0.0005 35.5 13.5 64 97-164 169-239 (393)
204 3f6p_A Transcriptional regulat 84.3 12 0.00041 28.5 10.7 100 74-179 16-116 (120)
205 1kgs_A DRRD, DNA binding respo 84.1 9.2 0.00032 32.6 10.8 102 74-179 16-117 (225)
206 2rjn_A Response regulator rece 84.0 14 0.00049 29.3 12.0 102 74-179 21-123 (154)
207 3f6c_A Positive transcription 83.9 13 0.00043 28.6 11.0 103 74-180 15-118 (134)
208 1p6q_A CHEY2; chemotaxis, sign 83.8 10 0.00036 28.9 10.1 102 74-179 20-124 (129)
209 3bw2_A 2-nitropropane dioxygen 83.6 20 0.0007 34.2 14.1 60 96-163 112-171 (369)
210 2oqr_A Sensory transduction pr 83.0 11 0.00037 32.3 10.9 102 74-180 18-119 (230)
211 1mvo_A PHOP response regulator 82.8 13 0.00046 28.5 10.5 102 74-179 17-118 (136)
212 3grc_A Sensor protein, kinase; 82.6 8.2 0.00028 30.1 9.2 103 74-179 20-124 (140)
213 3t8y_A CHEB, chemotaxis respon 82.6 18 0.00062 29.4 12.3 89 74-164 39-129 (164)
214 1f8m_A Isocitrate lyase, ICL; 82.4 42 0.0014 33.4 22.7 39 73-113 54-92 (429)
215 3r0j_A Possible two component 82.2 18 0.00061 31.7 12.2 102 74-179 37-138 (250)
216 1hg3_A Triosephosphate isomera 81.8 3.6 0.00012 37.5 7.4 116 99-247 81-209 (225)
217 1vc4_A Indole-3-glycerol phosp 81.8 1.7 6E-05 40.0 5.4 66 93-163 115-180 (254)
218 3kto_A Response regulator rece 81.6 6.7 0.00023 30.7 8.3 100 74-180 20-124 (136)
219 2zbt_A Pyridoxal biosynthesis 81.6 12 0.0004 34.6 11.2 74 92-166 27-109 (297)
220 1jub_A Dihydroorotate dehydrog 81.5 33 0.0011 31.6 14.4 159 121-309 76-275 (311)
221 2yw3_A 4-hydroxy-2-oxoglutarat 81.5 14 0.00049 32.6 11.2 121 131-306 10-132 (207)
222 3q9s_A DNA-binding response re 81.4 13 0.00044 33.0 11.0 101 74-180 51-152 (249)
223 3o63_A Probable thiamine-phosp 81.4 8.8 0.0003 35.1 10.0 87 74-163 126-218 (243)
224 2fiq_A Putative tagatose 6-pho 81.3 18 0.0006 36.0 12.8 66 285-354 261-327 (420)
225 2c6q_A GMP reductase 2; TIM ba 81.2 10 0.00036 36.4 10.9 63 99-164 123-189 (351)
226 3cg4_A Response regulator rece 81.1 2.4 8.2E-05 33.3 5.4 103 74-179 21-124 (142)
227 4avf_A Inosine-5'-monophosphat 80.9 8.5 0.00029 38.7 10.6 72 92-164 277-361 (490)
228 3cz5_A Two-component response 80.8 19 0.00065 28.5 13.8 103 74-180 19-123 (153)
229 1oy0_A Ketopantoate hydroxymet 80.8 19 0.00066 33.8 12.2 105 72-178 22-148 (281)
230 1w0m_A TIM, triosephosphate is 80.7 4.9 0.00017 36.6 8.0 116 99-247 78-206 (226)
231 2r25_B Osmosensing histidine p 80.7 18 0.00061 28.1 12.5 104 74-180 16-125 (133)
232 1p2f_A Response regulator; DRR 80.5 14 0.00048 31.5 10.6 98 74-179 16-114 (220)
233 2v82_A 2-dehydro-3-deoxy-6-pho 80.5 4.1 0.00014 35.6 7.2 61 93-163 67-127 (212)
234 2c6q_A GMP reductase 2; TIM ba 80.5 14 0.00047 35.6 11.5 72 92-165 168-253 (351)
235 2gwr_A DNA-binding response re 80.1 8 0.00028 33.7 9.0 102 74-180 19-120 (238)
236 4dad_A Putative pilus assembly 79.6 8.8 0.0003 30.2 8.4 100 74-179 34-138 (146)
237 1v5x_A PRA isomerase, phosphor 79.6 9.3 0.00032 34.0 9.3 84 91-175 6-93 (203)
238 1gte_A Dihydropyrimidine dehyd 79.4 65 0.0022 35.1 17.7 66 98-163 653-734 (1025)
239 3cwo_X Beta/alpha-barrel prote 79.2 7.8 0.00027 33.2 8.6 85 94-179 13-99 (237)
240 2tps_A Protein (thiamin phosph 79.1 8.1 0.00028 33.8 8.8 57 98-163 86-142 (227)
241 1h5y_A HISF; histidine biosynt 78.9 6.1 0.00021 34.7 7.9 127 83-245 77-229 (253)
242 3h5i_A Response regulator/sens 78.9 8 0.00027 30.4 7.9 101 74-179 19-121 (140)
243 1nsj_A PRAI, phosphoribosyl an 78.9 9.1 0.00031 34.1 9.0 85 91-176 7-95 (205)
244 3ceu_A Thiamine phosphate pyro 78.7 33 0.0011 29.9 14.4 156 97-309 17-176 (210)
245 2h6r_A Triosephosphate isomera 78.4 2.3 7.7E-05 38.2 4.9 59 99-159 75-133 (219)
246 3tqv_A Nicotinate-nucleotide p 78.3 6.7 0.00023 37.1 8.2 132 75-245 126-272 (287)
247 3cu5_A Two component transcrip 77.8 7.4 0.00025 30.8 7.4 82 96-179 39-120 (141)
248 3kyj_B CHEY6 protein, putative 77.2 12 0.0004 29.5 8.5 86 74-163 27-117 (145)
249 1yad_A Regulatory protein TENI 77.2 9.8 0.00033 33.4 8.7 86 73-163 101-191 (221)
250 4af0_A Inosine-5'-monophosphat 77.0 6.9 0.00024 40.3 8.4 79 83-163 268-349 (556)
251 3b0p_A TRNA-dihydrouridine syn 76.8 39 0.0013 32.2 13.4 78 86-163 59-163 (350)
252 3i42_A Response regulator rece 76.8 10 0.00035 28.9 7.8 103 74-180 17-120 (127)
253 1eep_A Inosine 5'-monophosphat 76.8 12 0.00041 36.4 9.9 78 83-163 194-284 (404)
254 3m47_A Orotidine 5'-phosphate 76.6 13 0.00045 33.4 9.5 79 98-180 83-172 (228)
255 3snk_A Response regulator CHEY 76.6 6 0.00021 30.8 6.5 103 74-179 28-130 (135)
256 3l0g_A Nicotinate-nucleotide p 76.1 2 6.8E-05 41.0 3.9 114 92-244 153-280 (300)
257 1i4n_A Indole-3-glycerol phosp 76.1 8 0.00027 35.7 8.0 67 93-163 110-177 (251)
258 1ys7_A Transcriptional regulat 76.1 9.8 0.00033 32.6 8.3 102 74-179 21-122 (233)
259 2nli_A Lactate oxidase; flavoe 76.0 19 0.00067 34.7 11.1 69 94-164 238-313 (368)
260 3r2g_A Inosine 5'-monophosphat 75.4 5.9 0.0002 38.6 7.2 70 92-163 148-227 (361)
261 1vzw_A Phosphoribosyl isomeras 75.4 15 0.0005 32.7 9.5 74 92-166 83-168 (244)
262 3eol_A Isocitrate lyase; seatt 75.3 69 0.0024 31.9 20.1 38 73-112 50-87 (433)
263 3q94_A Fructose-bisphosphate a 75.2 55 0.0019 30.7 14.1 212 72-309 8-240 (288)
264 4a3q_A Alanine racemase 1; iso 75.1 62 0.0021 31.3 14.9 90 76-180 24-119 (382)
265 3rqi_A Response regulator prot 74.9 12 0.00042 31.1 8.4 99 74-177 21-120 (184)
266 1vrd_A Inosine-5'-monophosphat 74.9 24 0.00082 35.0 11.8 70 92-163 285-368 (494)
267 3sgz_A Hydroxyacid oxidase 2; 74.8 19 0.00066 34.8 10.7 76 83-163 217-300 (352)
268 1i4n_A Indole-3-glycerol phosp 74.7 33 0.0011 31.5 11.8 189 73-308 28-233 (251)
269 1z41_A YQJM, probable NADH-dep 74.5 26 0.00089 33.1 11.5 66 98-163 149-248 (338)
270 3e5p_A Alanine racemase; ALR, 74.2 17 0.00057 35.2 10.1 83 84-180 32-121 (371)
271 1vhc_A Putative KHG/KDPG aldol 74.1 49 0.0017 29.6 18.7 172 74-308 8-188 (224)
272 1p0k_A Isopentenyl-diphosphate 73.9 17 0.00057 34.5 9.9 32 83-114 178-210 (349)
273 1jub_A Dihydroorotate dehydrog 73.9 13 0.00044 34.5 9.0 75 91-165 100-193 (311)
274 3gr7_A NADPH dehydrogenase; fl 73.7 38 0.0013 32.2 12.4 67 98-164 149-249 (340)
275 3ceu_A Thiamine phosphate pyro 73.7 7.5 0.00026 34.2 6.9 72 91-163 93-171 (210)
276 1w8s_A FBP aldolase, fructose- 73.5 25 0.00085 32.2 10.7 66 151-246 166-234 (263)
277 2qv0_A Protein MRKE; structura 73.3 25 0.00085 27.3 9.4 98 74-179 23-124 (143)
278 1xm3_A Thiazole biosynthesis p 73.2 18 0.00063 33.1 9.7 64 98-162 84-152 (264)
279 3a10_A Response regulator; pho 73.1 23 0.00079 26.3 8.9 100 74-179 15-114 (116)
280 1xm3_A Thiazole biosynthesis p 73.1 29 0.001 31.7 11.1 92 83-180 126-228 (264)
281 1me8_A Inosine-5'-monophosphat 73.0 9.3 0.00032 38.5 8.2 70 92-163 291-380 (503)
282 4af0_A Inosine-5'-monophosphat 72.7 29 0.00098 35.7 11.7 135 140-306 276-414 (556)
283 1wbh_A KHG/KDPG aldolase; lyas 72.6 51 0.0018 29.2 15.7 173 73-308 6-187 (214)
284 3vk5_A MOEO5; TIM barrel, tran 72.6 13 0.00044 35.2 8.5 102 72-178 26-137 (286)
285 1geq_A Tryptophan synthase alp 72.0 18 0.0006 32.2 9.1 62 96-161 98-159 (248)
286 2ayx_A Sensor kinase protein R 71.8 40 0.0014 29.8 11.5 101 74-178 143-243 (254)
287 1yio_A Response regulatory pro 71.7 20 0.00068 30.1 9.0 102 74-179 18-119 (208)
288 3oa3_A Aldolase; structural ge 71.6 42 0.0014 31.6 11.8 92 215-314 176-272 (288)
289 1kbi_A Cytochrome B2, L-LCR; f 71.4 17 0.00057 36.9 9.7 86 134-247 342-436 (511)
290 2pl1_A Transcriptional regulat 71.4 29 0.00099 25.8 13.2 101 74-179 14-115 (121)
291 3lab_A Putative KDPG (2-keto-3 71.3 10 0.00034 34.4 7.2 55 118-177 72-130 (217)
292 3n9r_A Fructose-bisphosphate a 71.0 72 0.0025 30.2 20.2 176 84-310 75-260 (307)
293 1ypf_A GMP reductase; GUAC, pu 70.7 15 0.00052 34.8 8.8 69 92-163 156-238 (336)
294 1q6o_A Humps, 3-keto-L-gulonat 70.6 42 0.0014 29.3 11.2 82 95-179 68-160 (216)
295 3to5_A CHEY homolog; alpha(5)b 70.2 43 0.0015 27.3 10.9 102 75-179 27-130 (134)
296 4ecl_A Serine racemase, vantg; 70.2 78 0.0027 30.3 15.3 81 84-178 30-116 (374)
297 2j48_A Two-component sensor ki 70.1 28 0.00097 25.3 8.7 100 74-179 15-115 (119)
298 2y88_A Phosphoribosyl isomeras 69.9 17 0.00058 32.1 8.5 72 92-165 82-170 (244)
299 1kbi_A Cytochrome B2, L-LCR; f 69.7 24 0.00083 35.7 10.5 79 83-164 343-432 (511)
300 3hgj_A Chromate reductase; TIM 69.5 44 0.0015 31.7 11.8 68 97-164 156-259 (349)
301 1jcn_A Inosine monophosphate d 69.5 25 0.00085 35.2 10.5 70 92-163 303-386 (514)
302 3h1g_A Chemotaxis protein CHEY 69.3 36 0.0012 26.0 10.3 103 74-179 19-124 (129)
303 3fwz_A Inner membrane protein 69.0 12 0.0004 30.3 6.6 80 90-175 55-136 (140)
304 1s8n_A Putative antiterminator 68.9 30 0.001 29.0 9.6 101 74-179 27-128 (205)
305 1ep3_A Dihydroorotate dehydrog 68.6 34 0.0012 31.3 10.5 81 96-176 179-284 (311)
306 3c3w_A Two component transcrip 68.6 11 0.00039 32.5 6.9 103 74-179 15-118 (225)
307 1x1o_A Nicotinate-nucleotide p 68.5 20 0.00068 33.7 8.9 71 85-163 197-267 (286)
308 3tdn_A FLR symmetric alpha-bet 68.4 8.7 0.0003 34.4 6.3 80 96-179 38-125 (247)
309 2f6u_A GGGPS, (S)-3-O-geranylg 68.1 13 0.00044 34.0 7.3 68 95-169 22-89 (234)
310 1o66_A 3-methyl-2-oxobutanoate 67.7 80 0.0027 29.5 13.1 104 72-177 5-129 (275)
311 1qpo_A Quinolinate acid phosph 67.7 4 0.00014 38.4 3.9 73 137-244 196-270 (284)
312 3eq2_A Probable two-component 66.8 38 0.0013 31.9 10.7 98 74-174 19-116 (394)
313 1o4u_A Type II quinolic acid p 66.6 2.4 8.1E-05 40.1 2.1 34 146-180 202-235 (285)
314 2isw_A Putative fructose-1,6-b 66.5 92 0.0032 29.7 16.9 106 74-181 7-127 (323)
315 2f6u_A GGGPS, (S)-3-O-geranylg 66.5 14 0.00048 33.7 7.2 64 95-163 147-217 (234)
316 1x1o_A Nicotinate-nucleotide p 66.3 12 0.00042 35.1 6.9 65 146-244 205-269 (286)
317 1wv2_A Thiazole moeity, thiazo 65.6 87 0.003 29.1 12.7 85 92-179 142-236 (265)
318 2jba_A Phosphate regulon trans 65.6 10 0.00036 28.7 5.4 99 74-179 16-119 (127)
319 3ajx_A 3-hexulose-6-phosphate 64.7 66 0.0023 27.4 11.5 80 83-166 53-137 (207)
320 2nzl_A Hydroxyacid oxidase 1; 64.7 22 0.00076 34.7 8.7 68 94-164 261-336 (392)
321 3mm4_A Histidine kinase homolo 64.6 65 0.0022 27.3 12.2 101 74-179 75-193 (206)
322 2b7n_A Probable nicotinate-nuc 64.6 22 0.00074 33.0 8.3 68 92-163 188-256 (273)
323 1me8_A Inosine-5'-monophosphat 64.4 29 0.00099 34.8 9.8 73 88-163 235-311 (503)
324 1zfj_A Inosine monophosphate d 64.3 71 0.0024 31.5 12.5 65 96-164 235-302 (491)
325 3gnn_A Nicotinate-nucleotide p 63.8 6.4 0.00022 37.4 4.5 99 107-244 180-282 (298)
326 1ydn_A Hydroxymethylglutaryl-C 63.2 17 0.00058 33.6 7.3 96 84-181 72-195 (295)
327 1gox_A (S)-2-hydroxy-acid oxid 62.9 1.1E+02 0.0036 29.3 13.1 30 133-163 223-252 (370)
328 3nav_A Tryptophan synthase alp 62.4 56 0.0019 30.2 10.7 91 73-163 139-236 (271)
329 2r14_A Morphinone reductase; H 61.9 51 0.0017 31.8 10.7 67 98-164 171-275 (377)
330 1m3u_A 3-methyl-2-oxobutanoate 61.7 90 0.0031 28.9 11.9 104 72-177 5-128 (264)
331 1vyr_A Pentaerythritol tetrani 61.5 79 0.0027 30.3 11.9 68 98-165 166-272 (364)
332 3gk0_A PNP synthase, pyridoxin 61.5 42 0.0015 31.4 9.5 147 74-253 87-255 (278)
333 1gvf_A Tagatose-bisphosphate a 61.5 71 0.0024 29.9 11.2 105 74-180 7-125 (286)
334 1xi3_A Thiamine phosphate pyro 60.4 20 0.00069 30.8 6.9 84 92-179 114-210 (215)
335 1o66_A 3-methyl-2-oxobutanoate 60.1 41 0.0014 31.5 9.2 75 101-182 103-198 (275)
336 3l5l_A Xenobiotic reductase A; 60.0 66 0.0023 30.7 11.1 69 97-165 162-267 (363)
337 4e38_A Keto-hydroxyglutarate-a 59.7 1E+02 0.0035 27.9 18.6 174 72-308 23-205 (232)
338 3glc_A Aldolase LSRF; TIM barr 59.6 49 0.0017 31.1 9.8 153 105-308 84-260 (295)
339 1xfc_A Alanine racemase; alpha 59.4 1.2E+02 0.0041 28.7 13.7 91 74-180 26-122 (384)
340 3eqz_A Response regulator; str 59.1 36 0.0012 25.7 7.6 101 74-181 17-124 (135)
341 1m3u_A 3-methyl-2-oxobutanoate 59.1 43 0.0015 31.1 9.1 91 85-182 79-198 (264)
342 3bw2_A 2-nitropropane dioxygen 59.0 1.2E+02 0.0042 28.6 18.1 118 148-308 113-240 (369)
343 3vnd_A TSA, tryptophan synthas 59.0 63 0.0021 29.8 10.3 91 73-163 137-234 (267)
344 2p10_A MLL9387 protein; putati 58.8 40 0.0014 31.7 8.9 76 88-163 165-258 (286)
345 2nr5_A Hypothetical protein SO 58.1 2 6.7E-05 30.7 -0.1 39 317-355 23-63 (67)
346 3paj_A Nicotinate-nucleotide p 58.0 23 0.0008 33.9 7.3 70 137-244 233-304 (320)
347 4ab4_A Xenobiotic reductase B; 57.9 1.3E+02 0.0043 29.0 12.7 69 97-165 157-263 (362)
348 3hp4_A GDSL-esterase; psychrot 57.8 20 0.00067 29.4 6.1 54 221-280 51-106 (185)
349 4g9p_A 4-hydroxy-3-methylbut-2 57.7 62 0.0021 31.9 10.4 134 149-321 43-221 (406)
350 2jk1_A HUPR, hydrogenase trans 57.2 63 0.0022 24.8 10.4 101 74-179 15-116 (139)
351 1qap_A Quinolinic acid phospho 57.1 48 0.0016 31.1 9.3 66 92-163 214-279 (296)
352 1oy0_A Ketopantoate hydroxymet 57.1 41 0.0014 31.6 8.7 111 65-182 74-216 (281)
353 1bd0_A Alanine racemase; isome 56.9 1.4E+02 0.0047 28.5 17.8 72 94-179 46-118 (388)
354 3zwt_A Dihydroorotate dehydrog 56.9 1.4E+02 0.0047 28.7 12.8 59 106-164 176-254 (367)
355 1w25_A Stalked-cell differenti 56.7 1E+02 0.0036 29.3 12.0 102 74-178 15-117 (459)
356 1mxs_A KDPG aldolase; 2-keto-3 56.6 1E+02 0.0035 27.4 11.1 88 74-171 110-202 (225)
357 1f76_A Dihydroorotate dehydrog 56.0 23 0.0008 33.2 7.0 60 105-164 164-245 (336)
358 3klo_A Transcriptional regulat 55.8 16 0.00054 31.4 5.4 105 74-180 21-127 (225)
359 2w6r_A Imidazole glycerol phos 55.5 33 0.0011 30.6 7.7 81 96-180 159-247 (266)
360 1wv2_A Thiazole moeity, thiazo 55.4 1.2E+02 0.0042 28.1 11.5 29 213-245 190-218 (265)
361 1o4u_A Type II quinolic acid p 55.2 19 0.00063 33.9 6.0 73 86-164 195-268 (285)
362 4hf7_A Putative acylhydrolase; 55.0 16 0.00056 31.2 5.3 57 221-280 63-121 (209)
363 3vav_A 3-methyl-2-oxobutanoate 54.7 43 0.0015 31.3 8.4 31 151-182 180-210 (275)
364 1qwg_A PSL synthase;, (2R)-pho 54.5 49 0.0017 30.6 8.6 68 96-163 88-167 (251)
365 2e6f_A Dihydroorotate dehydrog 54.3 19 0.00064 33.4 5.9 79 87-165 96-196 (314)
366 3llv_A Exopolyphosphatase-rela 54.1 62 0.0021 25.5 8.4 81 89-175 53-134 (141)
367 3c3m_A Response regulator rece 53.5 74 0.0025 24.4 11.0 103 74-179 17-120 (138)
368 1icp_A OPR1, 12-oxophytodienoa 53.4 62 0.0021 31.2 9.7 67 98-164 172-276 (376)
369 2jbm_A Nicotinate-nucleotide p 53.3 37 0.0013 31.9 7.9 68 92-163 203-271 (299)
370 1zfj_A Inosine monophosphate d 53.2 54 0.0018 32.3 9.4 72 92-163 281-364 (491)
371 3aty_A Tcoye, prostaglandin F2 53.2 80 0.0027 30.5 10.4 68 98-165 179-287 (379)
372 3sr7_A Isopentenyl-diphosphate 52.7 29 0.00098 33.7 7.1 64 100-163 162-236 (365)
373 1gox_A (S)-2-hydroxy-acid oxid 51.8 50 0.0017 31.7 8.7 77 83-164 225-309 (370)
374 1qpo_A Quinolinate acid phosph 51.8 72 0.0025 29.8 9.5 72 89-164 197-269 (284)
375 2hsa_B 12-oxophytodienoate red 51.4 96 0.0033 30.2 10.7 48 98-145 176-247 (402)
376 3paj_A Nicotinate-nucleotide p 51.3 70 0.0024 30.5 9.4 67 91-163 236-302 (320)
377 3kw3_A Alanine racemase; niaid 51.3 1E+02 0.0035 29.6 10.9 73 95-180 59-132 (376)
378 3vzx_A Heptaprenylglyceryl pho 50.5 56 0.0019 29.6 8.3 70 105-180 152-226 (228)
379 2vd8_A Alanine racemase; pyrid 50.1 1.7E+02 0.0059 27.7 16.9 90 75-180 27-122 (391)
380 1qo2_A Molecule: N-((5-phospho 49.8 87 0.003 27.5 9.4 64 97-164 148-223 (241)
381 1nvm_A HOA, 4-hydroxy-2-oxoval 49.7 67 0.0023 30.4 9.1 95 84-180 82-188 (345)
382 3flu_A DHDPS, dihydrodipicolin 49.6 1.2E+02 0.0042 27.9 10.8 77 97-173 32-122 (297)
383 3eeg_A 2-isopropylmalate synth 49.6 1.1E+02 0.0039 28.7 10.7 105 221-327 79-194 (325)
384 1ub3_A Aldolase protein; schif 49.3 1.4E+02 0.0048 26.6 10.7 122 149-311 76-211 (220)
385 3rmj_A 2-isopropylmalate synth 48.6 72 0.0025 30.8 9.3 31 150-180 163-196 (370)
386 1ydn_A Hydroxymethylglutaryl-C 48.5 1.5E+02 0.0051 27.1 11.1 107 214-326 74-197 (295)
387 3tak_A DHDPS, dihydrodipicolin 48.4 1.1E+02 0.0039 28.0 10.3 77 97-173 26-116 (291)
388 3qze_A DHDPS, dihydrodipicolin 48.3 92 0.0031 29.2 9.7 77 97-173 48-138 (314)
389 1ydo_A HMG-COA lyase; TIM-barr 48.3 63 0.0022 30.2 8.6 32 150-181 163-197 (307)
390 3tqv_A Nicotinate-nucleotide p 48.0 37 0.0013 31.9 6.8 69 89-163 201-269 (287)
391 1rpx_A Protein (ribulose-phosp 47.9 34 0.0012 30.0 6.3 68 90-161 74-144 (230)
392 3na8_A Putative dihydrodipicol 47.9 87 0.003 29.3 9.5 77 97-173 49-139 (315)
393 3bre_A Probable two-component 47.7 1E+02 0.0035 28.1 9.9 83 94-177 51-134 (358)
394 2gou_A Oxidoreductase, FMN-bin 47.6 1.5E+02 0.005 28.3 11.3 68 98-165 166-271 (365)
395 2ftp_A Hydroxymethylglutaryl-C 47.5 1.4E+02 0.0049 27.5 10.9 106 213-326 77-201 (302)
396 1a2o_A CHEB methylesterase; ba 47.5 1.8E+02 0.0063 27.2 12.0 88 74-165 17-109 (349)
397 3eeg_A 2-isopropylmalate synth 47.5 69 0.0023 30.3 8.8 31 150-180 157-190 (325)
398 1viz_A PCRB protein homolog; s 47.3 57 0.0019 29.7 7.8 83 94-182 139-230 (240)
399 3gka_A N-ethylmaleimide reduct 47.1 2E+02 0.0068 27.5 12.6 69 97-165 165-271 (361)
400 2b7n_A Probable nicotinate-nuc 47.1 48 0.0016 30.6 7.4 73 213-307 183-259 (273)
401 1p4c_A L(+)-mandelate dehydrog 46.9 34 0.0012 33.1 6.6 66 93-163 233-306 (380)
402 3ewb_X 2-isopropylmalate synth 46.9 1.8E+02 0.0061 26.9 13.0 87 239-327 98-193 (293)
403 3si9_A DHDPS, dihydrodipicolin 46.5 1.2E+02 0.004 28.5 10.2 87 87-173 24-137 (315)
404 3nl6_A Thiamine biosynthetic b 46.5 86 0.0029 31.9 9.8 105 74-181 99-231 (540)
405 1ny5_A Transcriptional regulat 46.3 1.4E+02 0.0048 28.4 10.9 101 74-178 14-114 (387)
406 1dc7_A NTRC, nitrogen regulati 46.1 10 0.00035 28.4 2.3 100 74-179 17-118 (124)
407 2fli_A Ribulose-phosphate 3-ep 45.7 93 0.0032 26.7 8.8 91 72-163 97-197 (220)
408 3qvq_A Phosphodiesterase OLEI0 45.7 1.6E+02 0.0054 26.1 10.6 71 97-177 178-248 (252)
409 3ru6_A Orotidine 5'-phosphate 45.7 70 0.0024 30.2 8.4 74 99-179 96-189 (303)
410 1h1y_A D-ribulose-5-phosphate 45.4 43 0.0015 29.5 6.7 90 74-163 103-200 (228)
411 1ka9_F Imidazole glycerol phos 45.4 1.1E+02 0.0038 26.8 9.4 65 96-164 155-225 (252)
412 2rdm_A Response regulator rece 45.4 93 0.0032 23.2 9.7 99 74-179 19-120 (132)
413 2htm_A Thiazole biosynthesis p 45.4 94 0.0032 29.0 9.0 85 74-163 115-206 (268)
414 3vk5_A MOEO5; TIM barrel, tran 45.3 97 0.0033 29.1 9.2 72 102-176 195-272 (286)
415 1vcf_A Isopentenyl-diphosphate 45.0 42 0.0014 31.5 6.8 69 96-164 134-212 (332)
416 2cw6_A Hydroxymethylglutaryl-C 44.4 1.1E+02 0.0038 28.1 9.6 101 218-326 79-198 (298)
417 3cpr_A Dihydrodipicolinate syn 44.1 1.1E+02 0.0037 28.4 9.5 77 97-173 41-131 (304)
418 1vfs_A Alanine racemase; TIM-b 43.9 2.1E+02 0.0073 27.0 13.9 73 94-180 45-118 (386)
419 4adt_A Pyridoxine biosynthetic 43.9 2.1E+02 0.007 26.8 13.9 75 88-165 23-108 (297)
420 3cwo_X Beta/alpha-barrel prote 43.8 36 0.0012 28.8 5.7 67 97-164 134-203 (237)
421 2czd_A Orotidine 5'-phosphate 43.8 96 0.0033 26.8 8.6 77 98-175 14-96 (208)
422 1vcf_A Isopentenyl-diphosphate 43.1 69 0.0023 30.0 8.0 21 94-114 193-213 (332)
423 1tv5_A Dhodehase, dihydroorota 43.0 2.6E+02 0.0088 27.6 13.6 113 97-245 201-404 (443)
424 2cw6_A Hydroxymethylglutaryl-C 42.6 1.2E+02 0.004 27.9 9.4 99 71-180 81-195 (298)
425 2ftp_A Hydroxymethylglutaryl-C 42.3 1.5E+02 0.0051 27.3 10.1 96 84-181 76-199 (302)
426 1id1_A Putative potassium chan 42.0 1.1E+02 0.0036 24.6 8.1 77 90-172 55-133 (153)
427 3kru_A NADH:flavin oxidoreduct 42.0 1.8E+02 0.0061 27.6 10.8 66 98-164 148-249 (343)
428 1wa3_A 2-keto-3-deoxy-6-phosph 41.9 1E+02 0.0036 26.1 8.5 27 137-163 151-177 (205)
429 1ps9_A 2,4-dienoyl-COA reducta 41.7 89 0.0031 32.0 9.2 66 98-163 146-247 (671)
430 1xky_A Dihydrodipicolinate syn 41.7 2.1E+02 0.0073 26.3 18.4 77 97-173 37-127 (301)
431 1dcf_A ETR1 protein; beta-alph 41.6 1.1E+02 0.0039 23.1 11.7 102 74-180 21-127 (136)
432 1mzh_A Deoxyribose-phosphate a 41.6 1.1E+02 0.0039 27.0 8.8 81 98-179 75-172 (225)
433 3mil_A Isoamyl acetate-hydroly 41.4 26 0.00089 29.8 4.4 58 221-280 56-116 (240)
434 3eol_A Isocitrate lyase; seatt 41.4 2.8E+02 0.0094 27.5 14.1 132 97-250 164-354 (433)
435 2pln_A HP1043, response regula 41.2 1.1E+02 0.0039 23.1 12.3 98 74-179 32-130 (137)
436 3rjt_A Lipolytic protein G-D-S 41.0 41 0.0014 27.8 5.5 59 222-280 69-133 (216)
437 3l9w_A Glutathione-regulated p 41.0 91 0.0031 30.3 8.7 102 73-182 37-141 (413)
438 3dz1_A Dihydrodipicolinate syn 40.8 1.2E+02 0.0042 28.2 9.3 76 97-172 33-120 (313)
439 3a5f_A Dihydrodipicolinate syn 40.5 1.2E+02 0.004 28.0 9.0 76 97-172 26-115 (291)
440 1tqj_A Ribulose-phosphate 3-ep 40.4 53 0.0018 29.2 6.4 85 75-161 52-138 (230)
441 1ivn_A Thioesterase I; hydrola 40.4 33 0.0011 28.3 4.8 53 222-280 48-102 (190)
442 3l0g_A Nicotinate-nucleotide p 39.6 68 0.0023 30.4 7.2 70 88-164 209-279 (300)
443 1thf_D HISF protein; thermophI 39.6 1.1E+02 0.0038 26.8 8.5 65 96-164 154-224 (253)
444 3daq_A DHDPS, dihydrodipicolin 39.5 1.1E+02 0.0037 28.2 8.6 147 98-249 28-194 (292)
445 3luf_A Two-component system re 39.4 2E+02 0.0068 25.3 11.1 99 75-177 139-240 (259)
446 3ble_A Citramalate synthase fr 39.4 1.3E+02 0.0044 28.4 9.3 91 86-180 91-208 (337)
447 1rd5_A Tryptophan synthase alp 39.3 1.1E+02 0.0038 27.3 8.5 90 73-163 132-229 (262)
448 3l21_A DHDPS, dihydrodipicolin 39.1 1.3E+02 0.0044 28.0 9.1 79 97-175 40-132 (304)
449 2hmc_A AGR_L_411P, dihydrodipi 38.8 93 0.0032 29.6 8.2 77 97-173 51-139 (344)
450 3qfe_A Putative dihydrodipicol 38.8 1.1E+02 0.0038 28.6 8.7 148 98-249 37-207 (318)
451 3ovp_A Ribulose-phosphate 3-ep 38.4 1E+02 0.0035 27.5 8.0 72 87-163 67-140 (228)
452 2ehh_A DHDPS, dihydrodipicolin 38.3 1.2E+02 0.004 28.0 8.7 77 97-173 25-115 (294)
453 3noy_A 4-hydroxy-3-methylbut-2 38.3 2.9E+02 0.0098 26.8 11.5 73 236-321 105-202 (366)
454 2ekc_A AQ_1548, tryptophan syn 38.2 2.2E+02 0.0076 25.6 11.6 58 96-157 112-170 (262)
455 2zbt_A Pyridoxal biosynthesis 38.0 98 0.0034 28.2 8.1 28 88-115 127-154 (297)
456 3mz2_A Glycerophosphoryl diest 37.9 1.1E+02 0.0038 28.2 8.4 81 93-180 186-279 (292)
457 2dy3_A Alanine racemase; alpha 37.6 2.5E+02 0.0087 26.0 14.6 91 74-180 18-114 (361)
458 3fkr_A L-2-keto-3-deoxyarabona 37.6 1E+02 0.0035 28.7 8.2 143 98-247 34-202 (309)
459 2yxg_A DHDPS, dihydrodipicolin 37.4 1.1E+02 0.0039 28.0 8.4 77 97-173 25-115 (289)
460 3khd_A Pyruvate kinase; malari 37.3 86 0.0029 32.0 8.0 90 73-164 245-356 (520)
461 1o5k_A DHDPS, dihydrodipicolin 37.3 1.3E+02 0.0045 27.9 8.9 79 97-175 37-129 (306)
462 3vkj_A Isopentenyl-diphosphate 37.2 90 0.0031 30.1 7.9 151 94-251 135-304 (368)
463 2q0q_A ARYL esterase; SGNH hyd 37.1 50 0.0017 27.6 5.5 51 223-277 69-122 (216)
464 2jbm_A Nicotinate-nucleotide p 37.0 64 0.0022 30.2 6.7 72 213-306 198-273 (299)
465 3dbi_A Sugar-binding transcrip 36.7 99 0.0034 27.9 7.8 63 72-137 48-121 (338)
466 3lg3_A Isocitrate lyase; conse 36.7 1.6E+02 0.0055 29.3 9.7 131 97-249 171-358 (435)
467 3i4e_A Isocitrate lyase; struc 36.6 1.8E+02 0.0061 29.0 10.0 132 97-250 171-359 (439)
468 3fxt_A Nucleoside diphosphate- 36.5 29 0.001 28.3 3.6 28 82-109 67-94 (113)
469 2wkj_A N-acetylneuraminate lya 36.4 1.2E+02 0.0041 28.1 8.4 77 97-173 36-126 (303)
470 3c2e_A Nicotinate-nucleotide p 36.3 27 0.00093 32.7 3.9 68 92-163 205-276 (294)
471 3r79_A Uncharacterized protein 36.3 2.4E+02 0.0082 25.4 17.9 171 87-308 33-218 (244)
472 3gnn_A Nicotinate-nucleotide p 36.1 88 0.003 29.5 7.4 67 91-163 214-280 (298)
473 2czd_A Orotidine 5'-phosphate 36.0 83 0.0028 27.2 6.9 74 98-179 70-153 (208)
474 3s5o_A 4-hydroxy-2-oxoglutarat 36.0 2.6E+02 0.0091 25.8 18.4 77 98-174 40-132 (307)
475 1f6k_A N-acetylneuraminate lya 35.8 1.3E+02 0.0044 27.7 8.5 77 97-173 28-119 (293)
476 2rfg_A Dihydrodipicolinate syn 35.8 1.1E+02 0.0039 28.2 8.1 77 97-173 25-115 (297)
477 3mub_A Alanine racemase; alpha 35.5 3E+02 0.01 26.2 14.8 162 95-306 48-221 (367)
478 3t05_A Pyruvate kinase, PK; te 35.4 99 0.0034 32.1 8.2 91 73-164 221-332 (606)
479 1ujp_A Tryptophan synthase alp 35.4 1.8E+02 0.0062 26.6 9.4 89 73-163 133-228 (271)
480 4adt_A Pyridoxine biosynthetic 35.3 1.9E+02 0.0064 27.0 9.6 91 91-181 130-260 (297)
481 2v9d_A YAGE; dihydrodipicolini 35.1 1.1E+02 0.0039 28.9 8.2 77 97-173 56-146 (343)
482 4exb_A Putative uncharacterize 35.0 1.5E+02 0.0051 27.1 8.8 100 75-180 174-286 (292)
483 2e6f_A Dihydroorotate dehydrog 35.0 1.7E+02 0.0059 26.7 9.3 79 99-177 180-289 (314)
484 4eo3_A Bacterioferritin comigr 34.9 1.6E+02 0.0054 27.5 9.1 108 164-297 159-276 (322)
485 2ojp_A DHDPS, dihydrodipicolin 34.8 1.1E+02 0.0037 28.2 7.8 80 97-176 26-119 (292)
486 2vc6_A MOSA, dihydrodipicolina 34.6 1.1E+02 0.0038 28.1 7.9 77 97-173 25-115 (292)
487 1qap_A Quinolinic acid phospho 34.5 58 0.002 30.6 5.9 71 214-306 210-281 (296)
488 3b4u_A Dihydrodipicolinate syn 34.4 1E+02 0.0036 28.4 7.6 77 97-173 28-119 (294)
489 3co8_A Alanine racemase; prote 34.3 2.6E+02 0.009 26.3 10.7 91 74-180 24-120 (380)
490 1qop_A Tryptophan synthase alp 34.2 1.9E+02 0.0066 26.0 9.3 91 73-163 136-233 (268)
491 3gwq_A D-serine deaminase; str 34.0 3.3E+02 0.011 26.3 15.5 97 74-180 61-161 (426)
492 3gg8_A Pyruvate kinase; malari 34.0 72 0.0025 32.4 6.8 89 73-163 236-346 (511)
493 3w01_A Heptaprenylglyceryl pho 33.8 1.3E+02 0.0044 27.3 7.9 69 106-179 159-231 (235)
494 2r8w_A AGR_C_1641P; APC7498, d 33.7 1E+02 0.0036 29.1 7.6 77 97-173 59-149 (332)
495 1rqb_A Transcarboxylase 5S sub 33.7 2.2E+02 0.0076 28.9 10.4 96 83-180 95-214 (539)
496 3m5v_A DHDPS, dihydrodipicolin 33.5 1.1E+02 0.0036 28.4 7.5 78 222-305 27-110 (301)
497 3l12_A Putative glycerophospho 33.5 1.5E+02 0.0052 27.2 8.6 71 98-178 237-307 (313)
498 1ydo_A HMG-COA lyase; TIM-barr 33.5 2.9E+02 0.01 25.5 12.6 110 213-326 75-199 (307)
499 3m5v_A DHDPS, dihydrodipicolin 33.2 1.6E+02 0.0055 27.2 8.7 77 97-173 32-123 (301)
500 4dpp_A DHDPS 2, dihydrodipicol 33.0 1.5E+02 0.0051 28.6 8.7 79 97-175 84-176 (360)
No 1
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0
Probab=100.00 E-value=2.8e-55 Score=416.04 Aligned_cols=254 Identities=26% Similarity=0.394 Sum_probs=239.7
Q ss_pred CchHHHHHHHcCCcEEEEEEec-CCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHH
Q 018508 72 SPESLKYRLQSNETLYGLFLLS-FSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWA 150 (355)
Q Consensus 72 ~~n~lk~~L~~G~~~~gl~v~~-~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i 150 (355)
..|+||++|++|++++|+|+.+ ++|..+|+++.+|||+|+|||||++.+.+.++++++++...+..++||||+.+++.|
T Consensus 2 ~~n~~k~~l~~g~~~~g~~~~~~~~p~~~e~a~~~g~D~vilDlEhav~~~~k~~~~l~a~~~~~~~~~VRVn~~~~~di 81 (261)
T 3qz6_A 2 NAMFLKKKLSAGKSVVGTMLNLVYNPDIVRIYAEAGLDYFIVDCEHAAYTFREINHLVSVAKNAGVSVLVRIPQVDRAHV 81 (261)
T ss_dssp -CCCHHHHHHTTCCEEEEEESSCCCTTHHHHHHHTTCSEEEEESSSSCCCHHHHHHHHHHHHHHTCEEEEECSSCCHHHH
T ss_pred CchHHHHHHHCCCCEEEEEEecCCCHHHHHHHhcCCcCEEEEeccCCCCCHHHHHHHHHHHhhcCCeEEEEeCCCCHHHH
Confidence 3688999999999999999999 999999999999999999999999999999999999888889999999999999999
Q ss_pred HHHHhcCCCeEeecCCCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCC--ccccccCCCceEEEEEEccHHHHHHH
Q 018508 151 KKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGID--EGYLSNYEEELLIMCQVESEEGVKRA 228 (355)
Q Consensus 151 ~~aLdaGa~GImvP~Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~--~~y~~~~n~~i~vi~mIET~~av~ni 228 (355)
+++++.|++|||+|||+|++|+++++++++|||.|.||+++ .|+.+||.. .+|++..|+++.+++||||++|+.|+
T Consensus 82 ~~~ld~G~~gI~lP~v~saed~~~~~~~~~~~p~G~Rg~~~--~r~~~~g~~~~~~y~~~~~~~~~v~~mIEt~~av~~~ 159 (261)
T 3qz6_A 82 QRLLDIGAEGFMIPGVQSAETMRETVRLAKYPPLGERGVGG--SIVTDFKPVNWAEWVQERNDEIFIMAQIEHVKAVEDI 159 (261)
T ss_dssp HHHHHHTCCEEEETTCCSHHHHHHHHHHHSCTTTCCCCCCC--GGGGTTCCCCHHHHHHHHHTTCEEEEEECCHHHHHTH
T ss_pred HHHHhcCCCEEEECCcCCHHHHHHHHHHhccCCCCCcCccc--chhhhccccchhhHHhcCCCCeEEEEEECCHHHHHHH
Confidence 99999999999999999999999999999999999999984 688999974 68999999999999999999999999
Q ss_pred HHHhccCCccEEEEChhhHHhhcCCCCCCCCHHHHHHHHHHHHHHHhCCCceeecccCCchhH-HHHHHCCCCEEEecch
Q 018508 229 EDIAAVDGVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVAEKGVLGGGKAYLAGFAMPHDAP-LEMKSRGYHMVSGAVD 307 (355)
Q Consensus 229 eeIaavpgVD~l~iGp~DLs~slG~~~~~~~p~v~~ai~~iv~aa~a~g~~~~g~~~~d~~~a-~~~~~~G~~~vs~~~D 307 (355)
++|+++|+||+|+||++||+++||+++++.||++.+++++++.+|+++|+. +|..+.+++.+ +.++++||+++++++|
T Consensus 160 ~eIaa~~~vd~l~iG~~DL~~~lg~~~~~~~p~v~~a~~~iv~aa~aaG~~-~g~~~~~~~~~~~~~~~~G~~~~s~~~D 238 (261)
T 3qz6_A 160 DSILAVQGVDAVIFGPRDLSNDLGIIGQTEHPKVYECYEKVYRAADRQGVV-KGFFTAADAAKMGWAVERGAQMLLWSGD 238 (261)
T ss_dssp HHHHTSTTCCEEEECHHHHHHHTTCTTCTTCHHHHHHHHHHHHHHHHHTCE-EEEEESSCGGGGHHHHHTTCCEEEEEEH
T ss_pred HHHhCCCCCCEEEECHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCC-EEEEeCCHHHHHHHHHHCCCCEEEEhhH
Confidence 999999999999999999999999999999999999999999999999976 46677889999 9999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCC
Q 018508 308 VGLFRSAAVEDVARFKMNLTD 328 (355)
Q Consensus 308 ~~ll~~~~~~~~~~~r~~~~~ 328 (355)
+.+|++++++.++.+|....-
T Consensus 239 ~~~l~~~~~~~~~~~~~~~~~ 259 (261)
T 3qz6_A 239 VAALQTYTAKGVKTIKELPGF 259 (261)
T ss_dssp HHHHHHHHHHHHHHHHTSTTC
T ss_pred HHHHHHHHHHHHHHHHHhhcc
Confidence 999999999999999986543
No 2
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=100.00 E-value=2.1e-54 Score=415.21 Aligned_cols=252 Identities=32% Similarity=0.474 Sum_probs=240.1
Q ss_pred CchHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHH
Q 018508 72 SPESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAK 151 (355)
Q Consensus 72 ~~n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~ 151 (355)
..|+||++|+.|++.+|+|+|+++|..+|+++.+|+|||+||+||++.+.+++..+++++...+.+++||||+.++++|+
T Consensus 26 ~~n~~k~~l~~G~~~~gl~~~~~~p~~~e~a~~~GaD~v~lDlEh~~~~~~~~~~~l~a~~~~~~~~~VRv~~~d~~di~ 105 (287)
T 2v5j_A 26 MENSFKAALKAGRPQIGLWLGLSSSYSAELLAGAGFDWLLIDGEHAPNNVQTVLTQLQAIAPYPSQPVVRPSWNDPVQIK 105 (287)
T ss_dssp SCCHHHHHHHTTCCEEEEEECSCCHHHHHHHHTSCCSEEEEESSSSSCCHHHHHHHHHHHTTSSSEEEEECSSSCHHHHH
T ss_pred cchHHHHHHHCCCcEEEEEEECCCHHHHHHHHhCCCCEEEEeCCCccchHHHHHHHHHHHHhcCCCEEEEECCCCHHHHH
Confidence 45899999999999999999999999999999999999999999999999999999998887788999999999999999
Q ss_pred HHHhcCCCeEeecCCCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEEccHHHHHHHHHH
Q 018508 152 KALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKRAEDI 231 (355)
Q Consensus 152 ~aLdaGa~GImvP~Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mIET~~av~nieeI 231 (355)
++|++|+++||+|||+|++|++++++.++|+|.|.||+|.+..|+..||...+|++..++++.+++||||++|++|+++|
T Consensus 106 ~~ld~ga~~ImlP~V~saeea~~~~~~~~~~p~G~Rg~g~~~~ra~~~g~~~~y~~~~~~~~~vi~mIEt~~av~n~deI 185 (287)
T 2v5j_A 106 QLLDVGTQTLLVPMVQNADEAREAVRATRYPPAGIRGVGSALARASRWNRIPDYLQKANDQMCVLVQIETREAMKNLPQI 185 (287)
T ss_dssp HHHHTTCCEEEESCCCSHHHHHHHHHHTSCTTTSCCCGGGTTTGGGTTTTSTTHHHHHHHHCEEEEEECSHHHHHTHHHH
T ss_pred HHHhCCCCEEEeCCCCCHHHHHHHHHHhccCccCccccccchhhhhhccchhhhHhhcCCCcEEEEEECcHHHHHHHHHH
Confidence 99999999999999999999999999999999999999876678899998788998888899999999999999999999
Q ss_pred hccCCccEEEEChhhHHhhcCCCCCCCCHHHHHHHHHHHHHHHhCCCceeecccCCchhHHHHHHCCCCEEEecchHHHH
Q 018508 232 AAVDGVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVAEKGVLGGGKAYLAGFAMPHDAPLEMKSRGYHMVSGAVDVGLF 311 (355)
Q Consensus 232 aavpgVD~l~iGp~DLs~slG~~~~~~~p~v~~ai~~iv~aa~a~g~~~~g~~~~d~~~a~~~~~~G~~~vs~~~D~~ll 311 (355)
+++|+||+|+||+|||+++||.++++.||++++++++++.+|+++|+.+ +.++.+++.++.++++||+++++++|+.+|
T Consensus 186 aa~~~vD~l~iG~~DLs~~lg~~~~~~~p~v~~a~~~iv~aaraaG~~~-gv~~~d~~~a~~~~~~G~~~~s~~~d~~~l 264 (287)
T 2v5j_A 186 LDVEGVDGVFIGPADLSADMGYAGNPQHPEVQAAIEQAIVQIRESGKAP-GILIANEQLAKRYLELGALFVAVGVDTTLL 264 (287)
T ss_dssp HTSTTEEEEEECHHHHHHHTTSTTCCCSHHHHHHHHHHHHHHHHTTSEE-EEECCCHHHHHHHHHTTCSEEEEEEHHHHH
T ss_pred hCcCCCCEEEECHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHcCCee-EEecCCHHHHHHHHHhCCCEEEECcHHHHH
Confidence 9999999999999999999999999999999999999999999999764 667889999999999999999999999999
Q ss_pred HHHHHHHHHHHHH
Q 018508 312 RSAAVEDVARFKM 324 (355)
Q Consensus 312 ~~~~~~~~~~~r~ 324 (355)
.+++++.++.+|.
T Consensus 265 ~~~~~~~~~~~~~ 277 (287)
T 2v5j_A 265 ARAAEALAARFGA 277 (287)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhc
Confidence 9999999999986
No 3
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A
Probab=100.00 E-value=5.2e-54 Score=405.65 Aligned_cols=248 Identities=31% Similarity=0.513 Sum_probs=235.1
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKA 153 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~a 153 (355)
|+||++|++|++.+++|+++++|..+++++.+|+|||+||+||+|.++++++.+++++...+.+++||||+.++.+|+++
T Consensus 8 ~~~k~~l~~g~~~~~~~l~v~~p~~~e~a~~~gaD~v~lDlEd~p~~~~~a~~~~~~~~~~~~~~~VRv~~~~~~~i~~~ 87 (256)
T 1dxe_A 8 NKFKAALAAKQVQIGCWSALSNPISTEVLGLAGFDWLVLDGEHAPNDISTFIPQLMALKGSASAPVVRVPTNEPVIIKRL 87 (256)
T ss_dssp CHHHHHHHTTCCEEEEEECSCSHHHHHHHTTSCCSEEEEESSSSSCCHHHHHHHHHHTTTCSSEEEEECSSSCHHHHHHH
T ss_pred hHHHHHHHCCCCeEEEEEeCCCHHHHHHHHhCCCCEEEEcCCCCCCCHHHHHHHHHHHHhCCCcEEEECCCCCHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999887777889999999999999999
Q ss_pred HhcCCCeEeecCCCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEEccHHHHHHHHHHhc
Q 018508 154 LDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKRAEDIAA 233 (355)
Q Consensus 154 LdaGa~GImvP~Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mIET~~av~nieeIaa 233 (355)
|++|++|||+|||+|++|++++++.++|||.|.||++.. .|+.+||...+|+...|+++.+++||||++|+.|+++|++
T Consensus 88 l~~g~~gI~~P~V~s~~ev~~~~~~~~~~p~g~Rg~~~~-~~~~~~g~~~~~~~~~~~~~~v~~~IEt~~av~~~~eIa~ 166 (256)
T 1dxe_A 88 LDIGFYNFLIPFVETKEEAELAVASTRYPPEGIRGVSVS-HRANMFGTVADYFAQSNKNITILVQIESQQGVDNVDAIAA 166 (256)
T ss_dssp HHTTCCEEEESCCCSHHHHHHHHHTTSCTTTCCCCCCSS-SGGGGGGTSTTHHHHHTTSCEEEEEECSHHHHHTHHHHHT
T ss_pred HhcCCceeeecCcCCHHHHHHHHHHhcCCCCCccCCCcc-hhhhhcCchHHHHHhcCcccEEEEEECCHHHHHhHHHHhC
Confidence 999999999999999999999999999999999999753 4777898667898888889999999999999999999999
Q ss_pred cCCccEEEEChhhHHhhcCCCCCCCCHHHHHHHHHHHHHHHhCCCceeecccCCchhHHHHHHCCCCEEEecchHHHHHH
Q 018508 234 VDGVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVAEKGVLGGGKAYLAGFAMPHDAPLEMKSRGYHMVSGAVDVGLFRS 313 (355)
Q Consensus 234 vpgVD~l~iGp~DLs~slG~~~~~~~p~v~~ai~~iv~aa~a~g~~~~g~~~~d~~~a~~~~~~G~~~vs~~~D~~ll~~ 313 (355)
+|+||+|+||+|||++++|+++++.||++.+++++++.+|+++|+.+ +.++.+++.++.++++||+++++++|+.+|.+
T Consensus 167 ~~~vd~l~iG~~DL~~~lg~~~~~~~p~v~~a~~~iv~aa~a~G~~~-~v~~~d~~~~~~~~~~G~~~~s~~~d~~~l~~ 245 (256)
T 1dxe_A 167 TEGVDGIFVGPSDLAAALGHLGNASHPDVQKAIQHIFNRASAHGKPS-GILAPVEADARRYLEWGATFVAVGSDLGVFRS 245 (256)
T ss_dssp STTCCEEEECHHHHHHHTTCTTCTTSHHHHHHHHHHHHHHHHTTCCE-EEECCSHHHHHHHHHTTCCEEEEEEHHHHHHH
T ss_pred CCCCCEEEEChHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCce-EEecCCHHHHHHHHHcCCCEEEechHHHHHHH
Confidence 99999999999999999999999999999999999999999999864 56778999999999999999999999999999
Q ss_pred HHHHHHHHHH
Q 018508 314 AAVEDVARFK 323 (355)
Q Consensus 314 ~~~~~~~~~r 323 (355)
++++.++.+|
T Consensus 246 ~~~~~~~~~~ 255 (256)
T 1dxe_A 246 ATQKLADTFK 255 (256)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHhh
Confidence 9999998876
No 4
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A
Probab=100.00 E-value=4e-54 Score=409.02 Aligned_cols=252 Identities=34% Similarity=0.557 Sum_probs=237.3
Q ss_pred CchHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHH
Q 018508 72 SPESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAK 151 (355)
Q Consensus 72 ~~n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~ 151 (355)
..|+||++|+.|++.+|+|+++++|..+|+++.+|+|||+||+||++.+.++++.+++++...+.+++||||+.++++++
T Consensus 5 ~~n~~k~~l~~g~~~~g~~~~~~~p~~~e~a~~~GaD~v~lDlE~~~~~~~~~~~~~~a~~~~~~~~~VRv~~~~~~~i~ 84 (267)
T 2vws_A 5 LSNPFKERLRKGEVQIGLWLSSTTAYMAEIAATSGYDWLLIDGEHAPNTIQDLYHQLQAVAPYASQPVIRPVEGSKPLIK 84 (267)
T ss_dssp CCCHHHHHHHTTCCEEEEEECSCCHHHHHHHHTTCCSEEEEETTTSCCCHHHHHHHHHHHTTSSSEEEEECSSCCHHHHH
T ss_pred ccHHHHHHHHCCCCEEEEEEeCCCHHHHHHHHhCCCCEEEEcCCCCCCCHHHHHHHHHHHHhCCCcEEEEeCCCCHHHHH
Confidence 34899999999999999999999999999999999999999999999999999999998877788999999999999999
Q ss_pred HHHhcCCCeEeecCCCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEEccHHHHHHHHHH
Q 018508 152 KALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKRAEDI 231 (355)
Q Consensus 152 ~aLdaGa~GImvP~Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mIET~~av~nieeI 231 (355)
++|++|++|||+|||+|++|+++++++++|||.|.||++.+..|+.+||...+|+...|+++.+++||||++|++|+++|
T Consensus 85 ~~l~~g~~~I~~P~V~s~ee~~~~~~~~~~~p~G~Rg~~~~~~~~~~~g~~~~y~~~~~~~~~v~~~IEt~~av~~~~eI 164 (267)
T 2vws_A 85 QVLDIGAQTLLIPMVDTAEQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTALDNLDEI 164 (267)
T ss_dssp HHHHTTCCEEEECCCCSHHHHHHHHHHTSCTTTSCCCSCGGGSGGGGGGTSTTHHHHHHHHCEEEEECCSHHHHHTHHHH
T ss_pred HHHHhCCCEEEeCCCCCHHHHHHHHHHHcCCCCCccccccchhhhhhcCcchhhhhhcccccEEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999753347888987778988888889999999999999999999
Q ss_pred hccCCccEEEEChhhHHhhcCCCCCCCCHHHHHHHHHHHHHHHhCCCceeecccCCchhHHHHHHCCCCEEEecchHHHH
Q 018508 232 AAVDGVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVAEKGVLGGGKAYLAGFAMPHDAPLEMKSRGYHMVSGAVDVGLF 311 (355)
Q Consensus 232 aavpgVD~l~iGp~DLs~slG~~~~~~~p~v~~ai~~iv~aa~a~g~~~~g~~~~d~~~a~~~~~~G~~~vs~~~D~~ll 311 (355)
+++||||+|+||+|||+++||.++++.||++++++++++.+|+++|+.+ +.++.+++.++.++++||+++++++|+.+|
T Consensus 165 a~~~gvd~l~iG~~DL~~~lg~~~~~~~p~v~~a~~~iv~aa~aaG~~~-~v~~~d~~~a~~~~~~G~~~~s~~~d~~~l 243 (267)
T 2vws_A 165 LDVEGIDGVFIGPADLSASLGYPDNAGHPEVQRIIETSIRRIRAAGKAA-GFLAVAPDMAQQCLAWGANFVAVGVDTMLY 243 (267)
T ss_dssp HTSTTCCEEEECHHHHHHHTTCSSSCCTHHHHHHHHHHHHHHHHTTCEE-EEECSSHHHHHHHHHTTCCEEEEEEHHHHH
T ss_pred hCCCCCCEEEEChHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCeE-EEecCCHHHHHHHHHCCCCEEEEchHHHHH
Confidence 9999999999999999999999999999999999999999999999864 567789999999999999999999999999
Q ss_pred HHHHHHHHHHHHH
Q 018508 312 RSAAVEDVARFKM 324 (355)
Q Consensus 312 ~~~~~~~~~~~r~ 324 (355)
.+++++.++.+|.
T Consensus 244 ~~~~~~~~~~~~~ 256 (267)
T 2vws_A 244 SDALDQRLAMFKS 256 (267)
T ss_dssp HHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHhc
Confidence 9999999998875
No 5
>1izc_A Macrophomate synthase intermolecular diels-aldera; TIM-barrel, pyruvate Mg(II) complex, lyase; 1.70A {Macrophoma commelinae} SCOP: c.1.12.5
Probab=100.00 E-value=1.1e-49 Score=390.46 Aligned_cols=249 Identities=23% Similarity=0.292 Sum_probs=230.4
Q ss_pred CchHHHHHHH-----cCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCC---CCeEEcCC
Q 018508 72 SPESLKYRLQ-----SNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATG---TPAILRLP 143 (355)
Q Consensus 72 ~~n~lk~~L~-----~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g---~~~iVRV~ 143 (355)
++|+||++|+ +|++.+|+|+++++|..+++++.+|+||||||+||++.+.++++++++++...+ .+++||||
T Consensus 24 ~~~~lk~~l~~~~~~~g~~~ig~~l~i~~p~~~e~a~~~GaD~vilDlEha~~~~e~~~~~l~a~~~~~~~~~~~~VRv~ 103 (339)
T 1izc_A 24 YPGNLRQALKDAMADPSKTLMGVAHGIPSTFVTKVLAATKPDFVWIDVEHGMFNRLELHDAIHAAQHHSEGRSLVIVRVP 103 (339)
T ss_dssp SCCCHHHHHHHHHHCGGGCEEEEEECSCCHHHHHHHHHTCCSEEEEETTTSCCCHHHHHHHHHHHHHHTTTCSEEEEECC
T ss_pred CcHHHHHHHHhhhccCCCeEEEEEEECCCHHHHHHHHhCCCCEEEEECCCCCCcHHHHHHHHHHhhhcCCCCCeEEEEeC
Confidence 5678999999 999999999999999999999999999999999999999999999988876444 78999999
Q ss_pred CCCHHHHHHHHhcCCCeEeecCCCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCC--------CccccccCCCceEE
Q 018508 144 ESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGI--------DEGYLSNYEEELLI 215 (355)
Q Consensus 144 ~~~~~~i~~aLdaGa~GImvP~Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~--------~~~y~~~~n~~i~v 215 (355)
+.++.+|+++|++|++|||+|||+|++|+++++++++|+|.|.||+++. +.+||. ..+|++..|+++.+
T Consensus 104 ~~~~~di~~~LdaGa~gImlP~V~saee~~~~~~~~~~~p~g~Rg~~~~---a~~~G~~~~~~~~~~~~y~~~a~~~i~v 180 (339)
T 1izc_A 104 KHDEVSLSTALDAGAAGIVIPHVETVEEVREFVKEMYYGPIGRRSFSPW---TFSPGIADASLFPNDPYNVATSNNHVCI 180 (339)
T ss_dssp TTCHHHHHHHHHHTCSEEEETTCCCHHHHHHHHHHHSCTTTCCCCCCST---TCBTTTBCCCSSTTCTTCHHHHHHHCEE
T ss_pred CCCHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHHhccCccCcccccch---hhcccccccccccchhhhhhhcCcCceE
Confidence 9999999999999999999999999999999999999999999999752 566774 35787777888999
Q ss_pred EEEEccHHHHHHHHHHhccCCccEEEEChhhHHhh--------cCCCCCCCCHHHHHHHHHHHHHHHhCCCceeecccCC
Q 018508 216 MCQVESEEGVKRAEDIAAVDGVDCVQMGPLDLSAS--------MGYLWDPGHRKVREMMRVAEKGVLGGGKAYLAGFAMP 287 (355)
Q Consensus 216 i~mIET~~av~nieeIaavpgVD~l~iGp~DLs~s--------lG~~~~~~~p~v~~ai~~iv~aa~a~g~~~~g~~~~d 287 (355)
++||||++||+|+++|+++|+||+|+||+|||+++ ||+++ ||++++++++++.+|+++|+.+ |+++.+
T Consensus 181 i~mIEt~~av~nldeIaa~~~vD~l~iG~~DLs~~~~~~~~~~lG~~~---~p~v~~a~~~iv~aaraaGk~~-g~~~~d 256 (339)
T 1izc_A 181 IPQIESVKGVENVDAIAAMPEIHGLMFGPGDYMIDAGLDLNGALSGVP---HPTFVEAMTKFSTAAQRNGVPI-FGGALS 256 (339)
T ss_dssp EEEECSHHHHHTHHHHHTCTTCCCEEECHHHHHHHTTCCTTCCTTSCC---CHHHHHHHHHHHHHHHHTTCCE-EEECSS
T ss_pred EEEEChHHHHHHHHHHhcCCCCCEEEECHHHHHhhhhcccchhhCCCC---CHHHHHHHHHHHHHHHHhCCce-eEecCC
Confidence 99999999999999999999999999999999999 88764 9999999999999999999875 888999
Q ss_pred chhHHHHHHCCCCEEEecchHHHHHHHHHHHHHHHHHhcC
Q 018508 288 HDAPLEMKSRGYHMVSGAVDVGLFRSAAVEDVARFKMNLT 327 (355)
Q Consensus 288 ~~~a~~~~~~G~~~vs~~~D~~ll~~~~~~~~~~~r~~~~ 327 (355)
++.++.++++||+++++++|+.++++++.+.++.+|..+.
T Consensus 257 ~~~a~~~~~~Gf~~l~~~~di~~l~~~~~~~v~~a~~iv~ 296 (339)
T 1izc_A 257 VDMVPSLIEQGYRAIAVQFDVWGLSRLVHGSLAQARASAK 296 (339)
T ss_dssp GGGHHHHHHTTEEEEEEEEHHHHHHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHhCCCEEEecHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999998654
No 6
>1sgj_A Citrate lyase, beta subunit; trimer, TIM barrel, structural genomics, PSI, protein structure initiative; 1.84A {Deinococcus radiodurans} SCOP: c.1.12.5
Probab=100.00 E-value=3.8e-35 Score=280.30 Aligned_cols=203 Identities=20% Similarity=0.156 Sum_probs=176.7
Q ss_pred EEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCC----HHHHHH----HHHHHH--hCCCCeEEcCCCCC-HH---HHH
Q 018508 86 LYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGG----ISDALA----CLHALA--ATGTPAILRLPESC-PT---WAK 151 (355)
Q Consensus 86 ~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~----~~~a~~----~i~a~~--~~g~~~iVRV~~~~-~~---~i~ 151 (355)
...+|+|+++|..++++..+|+|+|+||+||++.. +++++. .++.+. ..+..++||||..+ ++ +++
T Consensus 9 rs~L~~p~~~~~~~~~a~~~gaD~vilDlEdav~~~~~~k~~Ar~~v~~~l~~~~~~~~~~~~~VRv~~~~~~~~~~dl~ 88 (284)
T 1sgj_A 9 RSVLFAPGNRADLIAKLPRSAPDAVVIDLEDAVPGTAEAKAAARPVAHDAARDLIAAAPHLAVFVRVNALHSPYFEDDLS 88 (284)
T ss_dssp SEEEEEETTCHHHHHHTTTTCCSEEEEESSTTSCSSHHHHHHHHHHHHHHHHHHHHHSTTSEEEEECCCTTSTTHHHHGG
T ss_pred ceEEEccCCCHHHHHHHHhCCCCEEEEECCCCCCCchhhHHHHHHHHHHHHHhcccccCCCeEEEEeCCCCCHhHHHHHH
Confidence 46899999999999999999999999999999766 444444 344444 45678999999987 44 577
Q ss_pred HHHhcCCCeEeecCCCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEEccHHHHHHHHHH
Q 018508 152 KALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKRAEDI 231 (355)
Q Consensus 152 ~aLdaGa~GImvP~Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mIET~~av~nieeI 231 (355)
++++ |++|||+|||+|++|++.+++.++|+ | .++.+++||||++|+.|+++|
T Consensus 89 ~~l~-g~~~i~lPkv~s~~~v~~~~~~l~~~--g-------------------------~~~~i~~~IEt~~av~~~~eI 140 (284)
T 1sgj_A 89 VLTP-ELSGVVVPKLEMGAEARQVAQMLQER--S-------------------------LPLPILAGLETGAGVWNAREI 140 (284)
T ss_dssp GCCT-TSSEEEECSCCSHHHHHHHHHHHHHT--T-------------------------CCCCEEEEECSHHHHHTHHHH
T ss_pred HHhc-cCCEEEeCCCCCHHHHHHHHHHHHhc--C-------------------------CCeEEEEEecCHHHHHHHHHH
Confidence 8889 99999999999999999999999875 2 146799999999999999999
Q ss_pred hccCCccEEEEChhhHHhhcCCCCCCCCHHHHHHHHHHHHHHHhCCCceeecccCCc-------hhHHHHHHCCCC--EE
Q 018508 232 AAVDGVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVAEKGVLGGGKAYLAGFAMPH-------DAPLEMKSRGYH--MV 302 (355)
Q Consensus 232 aavpgVD~l~iGp~DLs~slG~~~~~~~p~v~~ai~~iv~aa~a~g~~~~g~~~~d~-------~~a~~~~~~G~~--~v 302 (355)
+++|+||+|+||++||++++|..++++||++.+++.+++.+|+++|+.++++++.+. +.++.++++||+ ++
T Consensus 141 a~~~~vd~l~iG~~DL~~~lg~~~~~~~~~~~~a~~~iv~aa~a~G~~~i~~v~~~~~d~~~l~~~~~~~~~~Gf~Gk~~ 220 (284)
T 1sgj_A 141 MEVPEVAWAYFGAEDYTTDLGGKRTPGGLEVLYARSQVALAARLTGVAALDIVVTALNDPETFRADAEQGRALGYSGKLC 220 (284)
T ss_dssp HTSTTEEEEEECHHHHHHHHTCCCCSSCGGGHHHHHHHHHHHHHHTCEEEECCCCCCSCHHHHHHHHHHHHHTTCSEEEE
T ss_pred HcCCCCcEEEECHHHHHHHhCCCCCCChHHHHHHHHHHHHHHHHcCCCeeeCCcCCCCCHHHHHHHHHHHHhCCCCcccc
Confidence 999999999999999999999988999999999999999999999998887888775 668889999994 67
Q ss_pred EecchHHHHHHHHH
Q 018508 303 SGAVDVGLFRSAAV 316 (355)
Q Consensus 303 s~~~D~~ll~~~~~ 316 (355)
.+++++.+++++++
T Consensus 221 ihP~qi~~i~~~f~ 234 (284)
T 1sgj_A 221 IHPAQVALAHEYFG 234 (284)
T ss_dssp SSHHHHHHHHTTCC
T ss_pred cCHHHHHHHHHHcC
Confidence 78888888888764
No 7
>2xz9_A Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria); thermophilic, PEP-utilising enzyme, transferase; 1.68A {Thermoanaerobacter tengcongensis} PDB: 2bg5_A 2xz7_A*
Probab=100.00 E-value=3.1e-34 Score=279.46 Aligned_cols=211 Identities=18% Similarity=0.149 Sum_probs=178.3
Q ss_pred CcEEEEEEecCCHHHHHHhhhcCCcEE--------EEeCCCCCCCHHHHHHHHHHHH-hCCCCeEEcCCCC---------
Q 018508 84 ETLYGLFLLSFSPTLAEISGLAGYDFV--------VVDMEHGPGGISDALACLHALA-ATGTPAILRLPES--------- 145 (355)
Q Consensus 84 ~~~~gl~v~~~sp~~~e~aa~~G~D~v--------ilDlEh~~~~~~~a~~~i~a~~-~~g~~~iVRV~~~--------- 145 (355)
.+.+++|+|+++|..++++...|+|+| ++|+||.|..+++++.+.+.++ ..+.+++||+++.
T Consensus 17 g~~~~l~~n~~~p~~~~~a~~~GadgVGL~RtE~l~ld~e~~p~~~~q~~~~~~~~~~~~~~~v~VR~~d~g~dk~~~~~ 96 (324)
T 2xz9_A 17 GKKVMLAANIGTPKDVASALANGAEGVGLFRTEFLYMDRNSLPSEEEQFEAYKEVVEKMGGRPVTIRTLDIGGDKELPYL 96 (324)
T ss_dssp SCEEEEEEEESSGGGHHHHHHTTCSSEEEECCGGGTSSSSSCCCHHHHHHHHHHHHHHTTTSCEEEECCCCBGGGCCTTT
T ss_pred CCEEEEEEECCCHHHHHHHHhCCCCeEeehhhhhhhccCCCCCCHHHHHHHHHHHHHHhCCCceEEEeCCCCcchhhhhh
Confidence 455799999999999999999999977 9999999998888887777766 4788999999985
Q ss_pred ------CH---------------------HHHHHHHhcCCCeEeecCCCCHHH---HHHHHHHcCCCCCCCCCCcccccc
Q 018508 146 ------CP---------------------TWAKKALDLGPQGVMFPMIDSPEA---AKEAVSYCRFPPSGVRGSAHTVVR 195 (355)
Q Consensus 146 ------~~---------------------~~i~~aLdaGa~GImvP~Vesaee---a~~vv~a~~~pP~G~Rg~g~~~~r 195 (355)
+| ..|.++++.|+.+||+|||+|++| ++++++.++|. .|+.|.
T Consensus 97 ~~~~E~nP~LG~RgiR~~l~~p~~~~~ql~Ai~ra~~~G~~~ImvPmV~s~~E~~~a~~~v~~~~~~---~r~~G~---- 169 (324)
T 2xz9_A 97 DMPKEMNPFLGYRAIRLCLDRPDIFKTQLRAILRASAYGNVQIMYPMISSVEEVRKANSILEEVKAE---LDREGV---- 169 (324)
T ss_dssp CCCCCSCGGGSSBTHHHHHHCHHHHHHHHHHHHHHGGGSCEEEEECSCCCHHHHHHHHHHHHHHHHH---HHHHTC----
T ss_pred ccccccCcccccceeeeeccchhhHHHHHHHHHHHHhCCCCEEEEcCCCCHHHHHHHHHHHHHHHHH---HHhcCC----
Confidence 22 246788888999999999999999 78888888873 333221
Q ss_pred cccCCCCccccccCCCceEEEEEEccHHHHHHHHHHhccCCccEEEEChhhHHhh-cC---------CCCCCCCHHHHHH
Q 018508 196 ASGYGIDEGYLSNYEEELLIMCQVESEEGVKRAEDIAAVDGVDCVQMGPLDLSAS-MG---------YLWDPGHRKVREM 265 (355)
Q Consensus 196 a~~~g~~~~y~~~~n~~i~vi~mIET~~av~nieeIaavpgVD~l~iGp~DLs~s-lG---------~~~~~~~p~v~~a 265 (355)
+ .|+++.+++|||||+|+.|+++|+++ ||+++||+|||+++ || ..+++.||+|.++
T Consensus 170 --------~----~~~~~~vg~mIEtp~av~~~d~Ia~~--vD~~siGtnDLtq~~lg~dR~~~~~~~~~~~~~p~v~~a 235 (324)
T 2xz9_A 170 --------K----YDKEIKVGIMVEIPSAAVTADILAKE--VDFFSIGTNDLTQYTLAVDRMNEHVKEYYQPFHPAILRL 235 (324)
T ss_dssp --------C----CCTTCEEEEEECSHHHHHTHHHHTTT--CSEEEECHHHHHHHHTTCCTTCGGGGGGCCTTCHHHHHH
T ss_pred --------C----CCCCcEEEEEECcHHHHHHHHHHHHh--CcEEEECHHHHHHHHhCCCCCcccccccCCCCCHHHHHH
Confidence 1 14578999999999999999999986 99999999999986 34 3457789999999
Q ss_pred HHHHHHHHHhCCCce--eecccCCchhHHHHHHCCCCEEEecchHHHHHHHH
Q 018508 266 MRVAEKGVLGGGKAY--LAGFAMPHDAPLEMKSRGYHMVSGAVDVGLFRSAA 315 (355)
Q Consensus 266 i~~iv~aa~a~g~~~--~g~~~~d~~~a~~~~~~G~~~vs~~~D~~ll~~~~ 315 (355)
+++++.+|+++|+++ ||.++++++.++.++++||+++++++|...+.+.+
T Consensus 236 i~~vv~aar~aG~~vgvcge~~~dp~~~~~l~~lG~~~~si~p~~i~~~~~~ 287 (324)
T 2xz9_A 236 VKMVIDAAHKEGKFAAMCGEMAGDPLAAVILLGLGLDEFSMSATSIPEIKNI 287 (324)
T ss_dssp HHHHHHHHHHTTCEEEECSGGGGCHHHHHHHHHHTCCEEEECGGGHHHHHHH
T ss_pred HHHHHHHHHHHCCceeecCccCCCHHHHHHHHHCCCCEEEEChhHHHHHHHH
Confidence 999999999999873 55577788999999999999999999988765544
No 8
>1u5h_A CITE; TIM barrel, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC, lyase; 1.65A {Mycobacterium tuberculosis} SCOP: c.1.12.5 PDB: 1u5v_A* 1z6k_A
Probab=100.00 E-value=4.1e-33 Score=265.43 Aligned_cols=203 Identities=19% Similarity=0.188 Sum_probs=171.6
Q ss_pred EEEEecCCHHHHHHhhhcCCcEEEEeCCCC--CCCHHHHHHHHHHHHhCCCCeEEcCCCCCHH----HHHHHHhcCCCeE
Q 018508 88 GLFLLSFSPTLAEISGLAGYDFVVVDMEHG--PGGISDALACLHALAATGTPAILRLPESCPT----WAKKALDLGPQGV 161 (355)
Q Consensus 88 gl~v~~~sp~~~e~aa~~G~D~vilDlEh~--~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~----~i~~aLdaGa~GI 161 (355)
-+|+|.++|..++++.. |+|+|+|||||+ +.+|++++.+++++...+..++||||+.++. .+.++++.|++||
T Consensus 10 ~L~vP~~~~~~~~ka~~-gaD~vilDlEDav~~~~k~~Ar~~l~~~~~~~~~~~VRVn~~~~~~~~~dl~~~~~~g~~gi 88 (273)
T 1u5h_A 10 WLFCPADAPEAFAAAAA-AADVVILDLEDGVAEAQKPAARNALRDTPLDPERTVVRINAGGTADQARDLEALAGTAYTTV 88 (273)
T ss_dssp EEEEETTCGGGHHHHHH-HCSEEEEESSTTSCGGGHHHHHHHHHHSCCCTTSEEEECCCTTCHHHHHHHHHHHTSCCCEE
T ss_pred EEEeeCCCHHHHHHHHh-CCCEEEEECCCCCCcCCHHHHHHHHHhcCcCCCeEEEEECCCCchHHHHHHHHHHhcCCCEE
Confidence 68999999999999999 999999999999 6789999999988766677899999999853 4788999999999
Q ss_pred eecCCCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEEccHHHHHHHHHHhccCCccEEE
Q 018508 162 MFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKRAEDIAAVDGVDCVQ 241 (355)
Q Consensus 162 mvP~Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mIET~~av~nieeIaavpgVD~l~ 241 (355)
|+|||+|++|++.+. ++.+++||||++|+.|+++|+++|+|++|+
T Consensus 89 ~lPKv~s~~~v~~~~-----------------------------------~~~i~~~IET~~~v~~~~eIaa~~~v~~l~ 133 (273)
T 1u5h_A 89 MLPKAESAAQVIELA-----------------------------------PRDVIALVETARGAVCAAEIAAADPTVGMM 133 (273)
T ss_dssp EETTCCCHHHHHTTT-----------------------------------TSEEEEEECSHHHHHTHHHHHHSTTEEEEE
T ss_pred EeCCCCCHHHHHHHh-----------------------------------hCCEEEEEeCHHHHHhHHHHhcCCCCcEEE
Confidence 999999999998653 256999999999999999999999999999
Q ss_pred EChhhHHhhcCCCCCCC-----CHHHHHHHHHHHHHHHhCCCceeecccCC---c----hhHHHHHHCCCC--EEEecch
Q 018508 242 MGPLDLSASMGYLWDPG-----HRKVREMMRVAEKGVLGGGKAYLAGFAMP---H----DAPLEMKSRGYH--MVSGAVD 307 (355)
Q Consensus 242 iGp~DLs~slG~~~~~~-----~p~v~~ai~~iv~aa~a~g~~~~g~~~~d---~----~~a~~~~~~G~~--~vs~~~D 307 (355)
||++||+.+||..++++ ++++.+++.+++.+|+++|+.++++++.+ + +++++.+++||+ .+.++++
T Consensus 134 ~G~~Dl~~~lG~~~~~~~~~~~~~~~~~a~~~iv~aaraaG~~aid~v~~~~~d~~gl~~~~~~~~~~Gf~Gk~~IHP~Q 213 (273)
T 1u5h_A 134 WGAEDLIATLGGSSSRRADGAYRDVARHVRSTILLAASAFGRLALDAVHLDILDVEGLQEEARDAAAVGFDVTVCIHPSQ 213 (273)
T ss_dssp ECHHHHHHHHTCSCSBCTTSCBCHHHHHHHHHHHHHHHHTTCEEEECCCSCTTCHHHHHHHHHHHHHHTCSEEEESSGGG
T ss_pred ecHHHHHHHhCCCCCCCccccccHHHHHHHHHHHHHHHHcCCCcccCCcCCCCCHHHHHHHHHHHHhCCCCceeecCHhH
Confidence 99999999999987765 78899999999999999999877777654 2 467788999996 5778999
Q ss_pred HHHHHHHHH---HHHHHHHHhc
Q 018508 308 VGLFRSAAV---EDVARFKMNL 326 (355)
Q Consensus 308 ~~ll~~~~~---~~~~~~r~~~ 326 (355)
+.++++++. +.++.+|..+
T Consensus 214 v~~i~~~f~ps~~ei~~A~~il 235 (273)
T 1u5h_A 214 IPVVRKAYAASHEKLAWARRVL 235 (273)
T ss_dssp HHHHHHHTCC------------
T ss_pred HHHHHHHcCCCHHHHHHHHHHH
Confidence 999999984 5555666554
No 9
>3qll_A Citrate lyase; beta barrel; 2.45A {Yersinia pestis}
Probab=100.00 E-value=2.1e-32 Score=265.76 Aligned_cols=212 Identities=15% Similarity=0.147 Sum_probs=164.9
Q ss_pred EEEEEEecCCHHHHHHhhhcCCcEEEEeCCCC--CCCHHHHHHHHHHH----HhCCCCeEEcCCCCCHH----HHHHHHh
Q 018508 86 LYGLFLLSFSPTLAEISGLAGYDFVVVDMEHG--PGGISDALACLHAL----AATGTPAILRLPESCPT----WAKKALD 155 (355)
Q Consensus 86 ~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~--~~~~~~a~~~i~a~----~~~g~~~iVRV~~~~~~----~i~~aLd 155 (355)
.--+|+|.++|+.++++..+|+|+|+|||||+ +.+|+++++++.++ ...+..++||||+.++. .+.++++
T Consensus 46 Rs~L~vP~~~p~~~eka~~~gaD~vilDLEDaV~~~~k~~Ar~~l~~~l~~~~~~~~~~~VRVn~~~t~~~~~Dl~~~l~ 125 (316)
T 3qll_A 46 RSWLFTPATRSDRFAKAAENGADVAIIDLEDSVSQADKEQARQKAISYLSSRPATSLPLALRINGLDTRAGIEDIHALLE 125 (316)
T ss_dssp CEEEEEESCC----------CCSEEEEECSTTSCGGGHHHHHHHHHC---------CCEEEECCCTTSHHHHHHHHHHHH
T ss_pred cEEEECCCCCHHHHHHHhhCCCCEEEEeCCCCCCCcCHHHHHHHHHHHHhcccccCCeEEEEECCCCCchhHHHHHHHHh
Confidence 34799999999999999999999999999999 56899999987643 23467899999999843 3788999
Q ss_pred cCC--CeEeecCCCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEEccHHHHHHHHHHhc
Q 018508 156 LGP--QGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKRAEDIAA 233 (355)
Q Consensus 156 aGa--~GImvP~Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mIET~~av~nieeIaa 233 (355)
+|+ +|||+|||++++|++.+++.+++. +.++.+++||||++|+.|+++|++
T Consensus 126 ~g~~~~gIvlPKvesa~~v~~~~~~l~~~---------------------------~~~~~l~~~IET~~gv~~~~eIa~ 178 (316)
T 3qll_A 126 CGSLPDYLVLPKTESAAHLQILDRLMMFA---------------------------GSDTRLIGIIESVRGLNAVESIAA 178 (316)
T ss_dssp SCCCCSEEEETTCCSHHHHHHHHHHTSCC-----------------------------CCEEEEEECSHHHHHTHHHHHT
T ss_pred CCCCCCEEEeCCCCCHHHHHHHHHHHHhc---------------------------CCCCEEEEEEcCHHHHHHHHHHHh
Confidence 986 999999999999999999998863 235789999999999999999998
Q ss_pred -cCCccEEEEChhhHHhhcCCCCCCCCHHHHHHHHHHHHHHHhCCCceeecccCCc-------hhHHHHHHCCCCE--EE
Q 018508 234 -VDGVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVAEKGVLGGGKAYLAGFAMPH-------DAPLEMKSRGYHM--VS 303 (355)
Q Consensus 234 -vpgVD~l~iGp~DLs~slG~~~~~~~p~v~~ai~~iv~aa~a~g~~~~g~~~~d~-------~~a~~~~~~G~~~--vs 303 (355)
+|+|++|+||++||+.+||+.. .++++.+++.+++.+|+++|+.++++++.+. ++++..+++||++ +.
T Consensus 179 a~~~v~~l~~G~~DL~~~lG~~~--~~~~l~~ar~~iv~AaraaGi~~id~v~~~~~D~~gl~~e~~~~r~lGf~Gk~~I 256 (316)
T 3qll_A 179 ATPKLAGLIFGAADMAADIGAAS--TWEPLALARARLVSACAMNGIPAIDAPFFDVHDVSGLQSETLRASDFGFSAKAAI 256 (316)
T ss_dssp SCTTEEEEEECHHHHHHHHTCCS--SHHHHHHHHHHHHHHHHHHTCCEEECCCSCSSCHHHHHHHHHHHHHHTCCEEEES
T ss_pred cCCCceEEEECHHHHHHHhCCCC--CcHHHHHHHHHHHHHHHHcCCceeeccccCcCCHHHHHHHHHHHHHCCCCeEEee
Confidence 8999999999999999999864 4788999999999999999998888887763 4567888999994 55
Q ss_pred ecchHHHHHHHH---HHHHHHHHHhc
Q 018508 304 GAVDVGLFRSAA---VEDVARFKMNL 326 (355)
Q Consensus 304 ~~~D~~ll~~~~---~~~~~~~r~~~ 326 (355)
+...+..+.+++ .+.++.+|..+
T Consensus 257 HP~QI~~vn~~f~Ps~~ei~~A~~il 282 (316)
T 3qll_A 257 HPAQISTINTLFTPTAAEIRHARAVL 282 (316)
T ss_dssp SGGGHHHHHHHTSCCHHHHC------
T ss_pred CHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 666777888887 56777777766
No 10
>3qqw_A Putative citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 2.44A {Ralstonia eutropha}
Probab=99.97 E-value=4.8e-31 Score=257.73 Aligned_cols=218 Identities=12% Similarity=0.104 Sum_probs=176.4
Q ss_pred EEEEEecCCHHHHHHhhhcCCcE-----EEEeCCCC--CCCHHHHHHHHHHH-H---hCCCCeEEcCCCCCHH----HHH
Q 018508 87 YGLFLLSFSPTLAEISGLAGYDF-----VVVDMEHG--PGGISDALACLHAL-A---ATGTPAILRLPESCPT----WAK 151 (355)
Q Consensus 87 ~gl~v~~~sp~~~e~aa~~G~D~-----vilDlEh~--~~~~~~a~~~i~a~-~---~~g~~~iVRV~~~~~~----~i~ 151 (355)
--+|+ ++|..++++..+|+|+ |+|||||+ +.+|+++|..+..+ . ..+..++||||+.++. .+.
T Consensus 25 s~l~~--~~~~~~eka~~~~aD~~~~~~vilDLEDaVa~~~K~~AR~~v~~~L~~~~~~~~~~~VRIN~~~t~~~~~DL~ 102 (332)
T 3qqw_A 25 CEHFA--GSEKLIGKAMDLQVEYGPVFDVTCDCEDGAAAGQEREHAEMVARMIASDRNVHGRAGARIHDPSHPAWRQDVD 102 (332)
T ss_dssp EEEEE--CSHHHHHHHHHHHHHHCSSEEEEEEHHHHSCTTCHHHHHHHHHHHHHSTTCCSSCEEEECCCTTSTTHHHHHH
T ss_pred HHHhc--CCHHHHHHHHhCCCCcCCCCcEEEECCCCCCCCcHHHHHHHHHHHHhcCcccCCEEEEEECCCCChHHHHHHH
Confidence 35666 7999999999999999 99999999 56799999877654 2 2457899999998764 356
Q ss_pred HHHhc---CCCeEeecCCCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEEccHHHHHHH
Q 018508 152 KALDL---GPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKRA 228 (355)
Q Consensus 152 ~aLda---Ga~GImvP~Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mIET~~av~ni 228 (355)
.+++. |++|||+|||++++|++.+.+.+++.. + .+|. ++.+.+++||||+.|+.|+
T Consensus 103 av~~~~~~g~dgI~LPKvesa~dv~~~~~~l~~~e---~----------~~G~--------~~~i~l~~~IET~~gv~~~ 161 (332)
T 3qqw_A 103 IIVNGAGGRLAYITVPKATNSGQVAEVIRYIGDVA---K----------RAGL--------DKPVPVHVLIETHGALRDV 161 (332)
T ss_dssp HHHHHSTTCCCCEEECCCCSHHHHHHHHHHHHHHH---H----------HTTC--------SSCCCEEEEECSHHHHHTH
T ss_pred HHHhhcccCCCEEEeCCCCCHHHHHHHHHHHHHHH---H----------hcCC--------CCCeEEEEEecCHHHHHHH
Confidence 67776 899999999999999999999887531 1 1221 2467899999999999999
Q ss_pred HHHhccCCccEEEEChhhHHhhcCCC---------CCCCCHHHHHHHHHHHHHHHhCCCceeecccCCc-------hhHH
Q 018508 229 EDIAAVDGVDCVQMGPLDLSASMGYL---------WDPGHRKVREMMRVAEKGVLGGGKAYLAGFAMPH-------DAPL 292 (355)
Q Consensus 229 eeIaavpgVD~l~iGp~DLs~slG~~---------~~~~~p~v~~ai~~iv~aa~a~g~~~~g~~~~d~-------~~a~ 292 (355)
++|+++|+|++|+||++||+++||.. +++.||.+.+++.+++.+|+++|+.++++++.+. ++++
T Consensus 162 ~eIaa~~rv~~L~~G~~DL~~~lg~~~~~~~~~~~g~~~~p~l~~ar~~vv~AAraaGi~~id~v~~d~~D~~gl~~~~~ 241 (332)
T 3qqw_A 162 FQIAELPNIEVLDFGLMDFVSGHHGAIPAAAMRSPGQFEHALLVRAKADMVAAALANGIVPAHNVCLNLKDAEVIASDAC 241 (332)
T ss_dssp HHHTTSTTEEEEEECHHHHHHTTTTCSCGGGGSTTGGGTSHHHHHHHHHHHHHHHHTTCEEEECCCSCSSCHHHHHHHHH
T ss_pred HHHhcCcCCCEEEEcHHHHHHHhCCCccccccCCCCcccCHHHHHHHHHHHHHHHHhCCCcccCCcccccCHHHHHHHHH
Confidence 99999999999999999999999873 3356888999999999999999999888888764 3466
Q ss_pred HHH-HCCCCE--EEecchHHHHHHHH---HHHHHHHHHhcC
Q 018508 293 EMK-SRGYHM--VSGAVDVGLFRSAA---VEDVARFKMNLT 327 (355)
Q Consensus 293 ~~~-~~G~~~--vs~~~D~~ll~~~~---~~~~~~~r~~~~ 327 (355)
+.+ ++||++ ..+...+...++++ .+.++..|+.+.
T Consensus 242 ~~~~~lGf~Gk~~IHP~QI~~in~~f~Ps~~ei~~A~~il~ 282 (332)
T 3qqw_A 242 RARNEFGFLRMWSIYPAQIQPIVNAMRPDFTEVEDAAGILV 282 (332)
T ss_dssp HHHHHHCCCEEEESSGGGHHHHHHHHSCCHHHHHHHHCC--
T ss_pred HHHHhCCCCcccccCHHHHHHHHHHhCcCHHHHHHHHHHHH
Confidence 776 899994 45566677888888 466777777654
No 11
>2hwg_A Phosphoenolpyruvate-protein phosphotransferase; enzyme I, phosphoenolpyruvate:sugar phosphotransferase system, PTS; HET: NEP; 2.70A {Escherichia coli} PDB: 2kx9_A 2xdf_A 2l5h_A
Probab=99.97 E-value=3.2e-30 Score=267.54 Aligned_cols=210 Identities=20% Similarity=0.152 Sum_probs=178.8
Q ss_pred cEEEEEEecCCHHHHHHhhhcCCcEE--------EEeCCCCCCCHHHHHHHHHHHH-hCCCCeEEcCCCC----------
Q 018508 85 TLYGLFLLSFSPTLAEISGLAGYDFV--------VVDMEHGPGGISDALACLHALA-ATGTPAILRLPES---------- 145 (355)
Q Consensus 85 ~~~gl~v~~~sp~~~e~aa~~G~D~v--------ilDlEh~~~~~~~a~~~i~a~~-~~g~~~iVRV~~~---------- 145 (355)
+.+++|+|+++|..++++...|+|+| ++|.||.|..+++.+.+...++ ..|.+++||+++.
T Consensus 267 ~~~~l~an~~~p~d~~~a~~~GadGVGL~RTE~l~ld~e~~P~~~~q~~~~~~~~~~~~g~pv~VRtlD~g~Dk~l~~~~ 346 (575)
T 2hwg_A 267 HQVEVCANIGTVRDVEGAERNGAEGVGLYRTEFLFMDRDALPTEEEQFAAYKAVAEACGSQAVIVRTMDIGGDKELPYMN 346 (575)
T ss_dssp CBCEEEEEESSTHHHHHHHHTTCSSEEEEEHHHHHTTSSSCCCHHHHHHHHHHHHHHTTTCCEEEECCCCSSSCCCGGGC
T ss_pred CEEEEEEeCCCHHHHHHHHhcCCCeeeeeeehheecccccCCCHHHHHHHHHHHHHHcCCCceEEEeCCCCCccchhhcc
Confidence 47899999999999999999999977 9999999988888887776665 4688999999864
Q ss_pred -----CH--------------H-------HHHHHHhcCCCeEeecCCCCHHH---HHHHHHHcCCCCCCCCCCccccccc
Q 018508 146 -----CP--------------T-------WAKKALDLGPQGVMFPMIDSPEA---AKEAVSYCRFPPSGVRGSAHTVVRA 196 (355)
Q Consensus 146 -----~~--------------~-------~i~~aLdaGa~GImvP~Vesaee---a~~vv~a~~~pP~G~Rg~g~~~~ra 196 (355)
+| . .|.++++.|..+||+|||+|++| ++++++.++|+. +.+|..
T Consensus 347 ~~~E~NP~LG~RgiRl~l~~p~if~~QlrAi~rA~~~G~~~Im~PmV~t~~E~~~a~~~v~~~~~~l-~~~G~~------ 419 (575)
T 2hwg_A 347 FPKEENPFLGWRAIRIAMDRREILRDQLRAILRASAFGKLRIMFPMIISVEEVRALRKEIEIYKQEL-RDEGKA------ 419 (575)
T ss_dssp CCCCSCGGGSSCTHHHHTTCHHHHHHHHHHHHHHTTSSCEEEEESSCCCHHHHHHHHHHHHHHHHHH-HHTTCC------
T ss_pred CCCCCCccccchheeecccChHHHHHHHHHHHHHHhcCCCEEEEeCCCCHHHHHHHHHHHHHHHHHH-HhcCCC------
Confidence 22 2 25677778999999999999999 788888888863 222221
Q ss_pred ccCCCCccccccCCCceEEEEEEccHHHHHHHHHHhccCCccEEEEChhhHHh----------hcCCCCCCCCHHHHHHH
Q 018508 197 SGYGIDEGYLSNYEEELLIMCQVESEEGVKRAEDIAAVDGVDCVQMGPLDLSA----------SMGYLWDPGHRKVREMM 266 (355)
Q Consensus 197 ~~~g~~~~y~~~~n~~i~vi~mIET~~av~nieeIaavpgVD~l~iGp~DLs~----------slG~~~~~~~p~v~~ai 266 (355)
.++++.+++|||||+|+.++++|++. ||+++||+|||++ ++|..+++.||.|.+++
T Consensus 420 ------------~~~~~~vg~MIE~P~a~~~ad~ia~~--vDf~siGtNDLtqy~la~dR~~~~l~~~~dp~~paVl~li 485 (575)
T 2hwg_A 420 ------------FDESIEIGVMVETPAAATIARHLAKE--VDFFSIGTNDLTQYTLAVDRGNDMISHLYQPMSPSVLNLI 485 (575)
T ss_dssp ------------CCTTCEEEEEECSHHHHHTHHHHHTT--CSEEEECHHHHHHHHHTCCTTCGGGGGGCCSSSHHHHHHH
T ss_pred ------------CCCCcEEEEEECcHHHHHHHHHHHHh--CCEEEECHHHHHHHHhCcCCCccccccccCCCCHHHHHHH
Confidence 14568999999999999999999985 9999999999999 67777889999999999
Q ss_pred HHHHHHHHhCCCc--eeecccCCchhHHHHHHCCCCEEEecchHHHHHHHH
Q 018508 267 RVAEKGVLGGGKA--YLAGFAMPHDAPLEMKSRGYHMVSGAVDVGLFRSAA 315 (355)
Q Consensus 267 ~~iv~aa~a~g~~--~~g~~~~d~~~a~~~~~~G~~~vs~~~D~~ll~~~~ 315 (355)
++++.+|+++|++ +||.++++++.++.++++||++++++++...+.+.+
T Consensus 486 ~~vv~aa~~~g~~vgvCGe~agdp~~~~~l~~lG~~~~S~~p~~v~~~~~~ 536 (575)
T 2hwg_A 486 KQVIDASHAEGKWTGMCGELAGDERATLLLLGMGLDEFSMSAISIPRIKKI 536 (575)
T ss_dssp HHHHHHHHHTTCEEEECSTTTTCTTTHHHHHHTTCCEEEECGGGHHHHHHH
T ss_pred HHHHHHHHHhCCeEEEeCCCCCCHHHHHHHHHCCCCEEEECccHHHHHHHH
Confidence 9999999999987 366688899999999999999999999988765444
No 12
>2wqd_A Phosphoenolpyruvate-protein phosphotransferase; kinase, cytoplasm, transport, magnesium, PEP- utilising enzyme, phosphotransferase system; 2.40A {Staphylococcus aureus} PDB: 2hro_A
Probab=99.97 E-value=2.1e-30 Score=268.72 Aligned_cols=210 Identities=17% Similarity=0.106 Sum_probs=177.4
Q ss_pred cEEEEEEecCCHHHHHHhhhcCCcEE--------EEeCCCCCCCHHHHHHHHHHHH-hCCCCeEEcCCCC----------
Q 018508 85 TLYGLFLLSFSPTLAEISGLAGYDFV--------VVDMEHGPGGISDALACLHALA-ATGTPAILRLPES---------- 145 (355)
Q Consensus 85 ~~~gl~v~~~sp~~~e~aa~~G~D~v--------ilDlEh~~~~~~~a~~~i~a~~-~~g~~~iVRV~~~---------- 145 (355)
+.+++|+|+++|..++++...|+|+| ++|.||.|...++.+.+.+.++ ..|.+++||+++.
T Consensus 269 ~~i~l~an~~~p~~~~~a~~~GadgVGL~RtE~l~ld~e~~P~~~~q~~~~~~~~~~~~g~pv~VR~lD~g~Dk~l~~~~ 348 (572)
T 2wqd_A 269 VHAELAANIGTPNDLPGVIENGAQGIGLYRTEFLYMGRDQMPTEEEQFEAYKEVLEAMGGKRVVVRTLDIGGDKELSYLN 348 (572)
T ss_dssp CBCEEEEEESSGGGHHHHHHTTCSCEEEEECHHHHSSSSSCCCHHHHHHHHHHHHHHTTTCCEEEECCCCCTTSCCTTSC
T ss_pred CeeeeeeccCCHHHHHHHHhCCCCeEEEeeccccccCcccCCCHHHHHHHHHHHHHHcCCCcEEEEECCCCCccchhhcc
Confidence 47899999999999999999999987 8899999988888887776665 4688999999875
Q ss_pred -----C--------------HHH-------HHHHHhcCCCeEeecCCCCHHH---HHHHHHHcCCCCCCCCCCccccccc
Q 018508 146 -----C--------------PTW-------AKKALDLGPQGVMFPMIDSPEA---AKEAVSYCRFPPSGVRGSAHTVVRA 196 (355)
Q Consensus 146 -----~--------------~~~-------i~~aLdaGa~GImvP~Vesaee---a~~vv~a~~~pP~G~Rg~g~~~~ra 196 (355)
+ +.. |.++++.|..+||+|||+|++| ++++++.++|++ +.+|.
T Consensus 349 ~~~E~NP~LG~RgiRl~l~~p~if~~QlrAi~rA~~~G~~~Im~PmV~s~~E~~~a~~~v~~~~~~l-~~~G~------- 420 (572)
T 2wqd_A 349 LPEEMNPFLGYRAIRLSLAQQDIFRPQLRALLRASVYGKLNIMFPMVATINEFREAKAILLEEKENL-KNEGH------- 420 (572)
T ss_dssp CCCCSCGGGSSCHHHHHTTCHHHHHHHHHHHHHHTTTSCEEEEESCCCSHHHHHHHHHHHHHHHHHH-HHHTC-------
T ss_pred CcccCCchhhhhhhhhcccChHHHHHHHHHHHHHHhcCCCEEEEeCCCCHHHHHHHHHHHHHHHHHH-HhcCC-------
Confidence 2 222 6777888989999999999999 566888888864 22221
Q ss_pred ccCCCCccccccCCCceEEEEEEccHHHHHHHHHHhccCCccEEEEChhhHHhh----------cCCCCCCCCHHHHHHH
Q 018508 197 SGYGIDEGYLSNYEEELLIMCQVESEEGVKRAEDIAAVDGVDCVQMGPLDLSAS----------MGYLWDPGHRKVREMM 266 (355)
Q Consensus 197 ~~~g~~~~y~~~~n~~i~vi~mIET~~av~nieeIaavpgVD~l~iGp~DLs~s----------lG~~~~~~~p~v~~ai 266 (355)
..|+++.+++|||||+|+.++++|++. ||+++||+|||+|+ ++..+++.||.|.+++
T Consensus 421 -----------~~~~~~~vg~MIE~P~a~~~ad~ia~~--vDf~siGtNDLtQ~~lg~dR~~~~v~~~~dp~~paVl~li 487 (572)
T 2wqd_A 421 -----------DISDDIELGIMVEIPATAALADVFAKE--VDFFSIGTNDLIQYTLAADRMSERVSYLYQPYNPSILRLV 487 (572)
T ss_dssp -----------CCCSCCEEEEEECCHHHHHTHHHHHHH--CSEEEECHHHHHHHHHTCCSSSGGGGGGCCTTCHHHHHHH
T ss_pred -----------CCCCCcEEEEEEccHHHHHHHHHHHHh--CCEEEECHHHHHHHHhccCCCccccccccCCCCHHHHHHH
Confidence 124568999999999999999999985 99999999999986 3456788999999999
Q ss_pred HHHHHHHHhCCCc--eeecccCCchhHHHHHHCCCCEEEecchHHHHHHHH
Q 018508 267 RVAEKGVLGGGKA--YLAGFAMPHDAPLEMKSRGYHMVSGAVDVGLFRSAA 315 (355)
Q Consensus 267 ~~iv~aa~a~g~~--~~g~~~~d~~~a~~~~~~G~~~vs~~~D~~ll~~~~ 315 (355)
++++.+|+++|++ +||.++++++.++.++++||+++++++|.....+.+
T Consensus 488 ~~vv~aa~~~g~~vgiCGe~agdp~~~~~l~~lG~~~~S~~p~~v~~~k~~ 538 (572)
T 2wqd_A 488 KQVIEASHKEGKWTGMCGEMAGDETAIPLLLGLGLDEFSMSATSILKARRQ 538 (572)
T ss_dssp HHHHHHHHHTTCEEEECSGGGGCTTTHHHHHHHTCCEEEECHHHHHHHHHH
T ss_pred HHHHHHHHHhCCeEEEeCCccCCHHHHHHHHHCCCCEEEeccchHHHHHHH
Confidence 9999999999987 366688899999999999999999999998765544
No 13
>3r4i_A Citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.24A {Burkholderia xenovorans}
Probab=99.97 E-value=7.2e-30 Score=250.09 Aligned_cols=217 Identities=18% Similarity=0.167 Sum_probs=168.8
Q ss_pred cEEEEEEecCCHHHHHHhhhcCCcE-----EEEeCCCC--CCCHHHHHHHHHHHH----hCCCCeEEcCCCCCHH----H
Q 018508 85 TLYGLFLLSFSPTLAEISGLAGYDF-----VVVDMEHG--PGGISDALACLHALA----ATGTPAILRLPESCPT----W 149 (355)
Q Consensus 85 ~~~gl~v~~~sp~~~e~aa~~G~D~-----vilDlEh~--~~~~~~a~~~i~a~~----~~g~~~iVRV~~~~~~----~ 149 (355)
|.--+|+ ++|+.++|+..+|+|+ |+|||||+ +.+|+++|.++..+- ..+..++||||+.++. +
T Consensus 22 ~~~~~~~--~~~~~~eka~~~gaD~~pv~~vilDLEDaVap~~K~~Ar~~v~~~L~~~~~~~~~~~VRIN~~dt~~~~~D 99 (339)
T 3r4i_A 22 PACDHYA--GSEKLMLKSLALQQQLGPVFDITLDCEDGAQVGREAQHAELVASLLGSEHDRFGRVGVRIHDFDHAHWRDD 99 (339)
T ss_dssp CSEEEEE--CSHHHHHHHHHHHHHHCTTEEEEEESSTTSCSSCHHHHHHHHHHHTTSSSCCSSCEEEECCCTTSTTHHHH
T ss_pred cHHHhhC--CCHHHHHHHHhCCCCcCCCCcEEEECCCCCCCCCHHHHHHHHHHHHhcccccCCeEEEEECCCCccHHHHH
Confidence 3446676 8999999999999999 99999999 468999998876542 2346899999998764 3
Q ss_pred HHHHHhc---CCCeEeecCCCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEEccHHHHH
Q 018508 150 AKKALDL---GPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVK 226 (355)
Q Consensus 150 i~~aLda---Ga~GImvP~Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mIET~~av~ 226 (355)
+..++++ |+++||+|||++++|++.+.+.+.+.. + .+|. +..+.+++||||+.|+.
T Consensus 100 L~al~~~~~~g~~~I~LPKves~~dv~~~~~~l~~~e---~----------~~G~--------~~~~~l~~~IET~~gv~ 158 (339)
T 3r4i_A 100 VRLILRAAKRAPAYITLPKIRHVHDAAEMVAFIEATR---R----------ELGI--------AQPVPVQLLVETHGALT 158 (339)
T ss_dssp HHHHHHHCSSCCSCEEECC-CCHHHHHHHHHHHHHHH---H----------HTTC--------SSCCCEEEEECSHHHHH
T ss_pred HHHhhhhccCCCCEEEeCCCCCHHHHHHHHHHHHHHH---H----------HcCC--------CCCcEEEEEeccHHHHH
Confidence 5667775 789999999999999999998886531 1 1111 23578999999999999
Q ss_pred HHHHHhccCCccEEEEChhhHHhhcCCCC---------CCCCHHHHHHHHHHHHHHHhCCCceeecccCCc---h----h
Q 018508 227 RAEDIAAVDGVDCVQMGPLDLSASMGYLW---------DPGHRKVREMMRVAEKGVLGGGKAYLAGFAMPH---D----A 290 (355)
Q Consensus 227 nieeIaavpgVD~l~iGp~DLs~slG~~~---------~~~~p~v~~ai~~iv~aa~a~g~~~~g~~~~d~---~----~ 290 (355)
|+++|+++|+|++|+||++||+++||... ++.||.+.+++.+++.+|+++|+.++++++.+. + +
T Consensus 159 ~~~eIAa~~rv~~L~~G~~DL~~~lg~~~~~~~~~~~~~~~~p~~~~a~~~iv~AAraaGi~~id~v~~d~~D~~gl~~~ 238 (339)
T 3r4i_A 159 RVFDLAALPGVEALSFGLMDFVSAHDGAIPDTAMRSPGQFDHPLVRRAKLEISAACHAYGKVPSHNVSTEVRDMSVVAND 238 (339)
T ss_dssp THHHHHTCTTEEEEEECHHHHHHTTTTSSCGGGGSTTHHHHSHHHHHHHHHHHHHHHHTTCEEEECCCCCSSCHHHHHHH
T ss_pred hHHHHHcCcCCCEEEECHHHHHHHhCCCcCccccCCCccccCHHHHHHHHHHHHHHHHcCCCCccCCCcCCCChHHHHHH
Confidence 99999999999999999999999998632 234788999999999999999998888888764 3 4
Q ss_pred HHHHH-HCCCC-EEEecc-hHHHHHHHH---HHHHHHHHH
Q 018508 291 PLEMK-SRGYH-MVSGAV-DVGLFRSAA---VEDVARFKM 324 (355)
Q Consensus 291 a~~~~-~~G~~-~vs~~~-D~~ll~~~~---~~~~~~~r~ 324 (355)
++..+ ++||+ .+++.+ .+..+.+++ .+.++..|.
T Consensus 239 ~~~~~~~lGf~Gk~~IHP~QI~~in~~f~Ps~~ei~~A~~ 278 (339)
T 3r4i_A 239 AARARNEFGYTRMWSIHPAQIEAIVAAFAPRDEEITTATE 278 (339)
T ss_dssp HHHHHHTTCCSEEEESSHHHHHHHHHHTSCCTHHHHHHHH
T ss_pred HHHHHHhCCCCcceeeCHHHHHHHHHHhCCCHHHHHHHHH
Confidence 66665 89999 455554 455666665 234444444
No 14
>3oyz_A Malate synthase; TIM barrel, transferase; HET: ACO; 1.95A {Haloferax volcanii} PDB: 3oyx_A* 3pug_A
Probab=99.94 E-value=1.4e-27 Score=238.57 Aligned_cols=208 Identities=14% Similarity=0.088 Sum_probs=167.3
Q ss_pred EEEEec--CCHHHHHHhhhc----CCcEEEEeCCCC--CCCHHHHHHHHHHH-Hh----CCCCeEEcC----CCCCHHH-
Q 018508 88 GLFLLS--FSPTLAEISGLA----GYDFVVVDMEHG--PGGISDALACLHAL-AA----TGTPAILRL----PESCPTW- 149 (355)
Q Consensus 88 gl~v~~--~sp~~~e~aa~~----G~D~vilDlEh~--~~~~~~a~~~i~a~-~~----~g~~~iVRV----~~~~~~~- 149 (355)
-||+|+ ++|++++++..+ |+|.|+|||||+ +..|+.||.++..+ .. .+..++||| |+.++.+
T Consensus 18 ~LfVPg~~~rp~~l~KA~~~~k~~gADaVIlDLEDAVap~~K~~AR~~v~~~L~~~~~~~~~~v~VRI~~~RN~~~T~~~ 97 (433)
T 3oyz_A 18 PTAVEGEDDSAKMLRRAAGLRGMQAPDVWVPDNEDATAPSMRDEGAENIVEVISEQGAEFPGEIHPRMVWHRDSPETRYQ 97 (433)
T ss_dssp ESCCSSCSCTTHHHHHHHHCCGGGSCSEEEEESSTTSCGGGHHHHHHHHHHHHHHHGGGCSSEECCBCCCCTTCHHHHHH
T ss_pred eEEeeCCCCCHHHHHHHHhcccCCCCCEEEEeCCCCCCcccHHHHHHHHHHHHHhhccccCCcEEEEECCCCCCCCChhc
Confidence 578999 999999999999 999999999998 56899999877654 21 223489999 9877544
Q ss_pred ----HHHHHh------cCCCeEeecCCCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEE
Q 018508 150 ----AKKALD------LGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQV 219 (355)
Q Consensus 150 ----i~~aLd------aGa~GImvP~Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mI 219 (355)
+..++. .|.+|||+|||+++++++.+.+.+.... + .+|. ..+.+.+++||
T Consensus 98 ~~~DL~al~~~~~~a~~~~dgIvLPKvesa~dV~~l~~~L~~~E---~----------~~Gl-------~~G~i~lialI 157 (433)
T 3oyz_A 98 GFQHMLDITDPERGAVEHIHGFVIPEVGGIDDWKKADEFFTIVE---H----------EHGL-------DEGSLAMSVII 157 (433)
T ss_dssp HHHHHHHHTCGGGSCGGGCCEEEECSCCSHHHHHHHHHHHHHHH---H----------HTTC-------CTTCSEEEEEE
T ss_pred cHHHHHHHhccccccccCCCEEEeCCCCCHHHHHHHHHHHHHHH---H----------HhCC-------CCCCeEEEEEE
Confidence 566666 6789999999999999998887765321 0 0111 13467899999
Q ss_pred ccHHH---HHHHHHHhcc-----CCccEEEEChhhHHhhcCCCCCCC-CHHHHHHHHHHHHHHHhCCCceeecccCCc--
Q 018508 220 ESEEG---VKRAEDIAAV-----DGVDCVQMGPLDLSASMGYLWDPG-HRKVREMMRVAEKGVLGGGKAYLAGFAMPH-- 288 (355)
Q Consensus 220 ET~~a---v~nieeIaav-----pgVD~l~iGp~DLs~slG~~~~~~-~p~v~~ai~~iv~aa~a~g~~~~g~~~~d~-- 288 (355)
||+.| |.|+++||+. |+|++|+||++||+.+||+..++. ||.+.+++.+++.+|+++|+.++++++.+.
T Consensus 158 ETa~g~~~L~na~eIAaasr~~~pRV~gL~~G~~DLsasLG~~~~~~~~~el~~ARs~IVlAARAaGi~aIDgV~~di~D 237 (433)
T 3oyz_A 158 ESGEAELAMGDLRDEMGKPTNNLERLFLLVDGEVDYTKDMRAMTPTGELPAWPELRHNTSRGASAAGCVAVDGPYDDIRD 237 (433)
T ss_dssp CSHHHHHHGGGHHHHHHCTTCCGGGEEEEEECHHHHHHHHTCCCTTCCCCCCHHHHHHHHHHHHHHTCEEEECCCCCTTC
T ss_pred eChhHHHHHHHHHHHHhhhccCCCCeEEEEECHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHhCCCcccccccCCCC
Confidence 99999 9999999976 899999999999999999987654 578999999999999999999899987763
Q ss_pred -----hhHHHHHHCCCCE--EEecchHHHHHHHH
Q 018508 289 -----DAPLEMKSRGYHM--VSGAVDVGLFRSAA 315 (355)
Q Consensus 289 -----~~a~~~~~~G~~~--vs~~~D~~ll~~~~ 315 (355)
+.+++.+++||.+ +.+...+...++++
T Consensus 238 ~egL~~ea~~ar~lGF~GK~~IHPsQV~vIn~aF 271 (433)
T 3oyz_A 238 VEGYRERMTDNQAKGMLGIWSLTPGQVVEANTSP 271 (433)
T ss_dssp HHHHHHHHHHHHTTTCCEEEECSHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhCCCCceEecCHHHHHHHHHhc
Confidence 3567778999996 45566666666665
No 15
>2ols_A Phosphoenolpyruvate synthase; MC structural genomics, PSI-2, protein structure initiative, M center for structural genomics, transferase; 2.40A {Neisseria meningitidis}
Probab=99.92 E-value=1.9e-24 Score=231.99 Aligned_cols=206 Identities=16% Similarity=0.113 Sum_probs=163.9
Q ss_pred cEEEEEEecCCHHHHHHhhhcCCcEE--------EEeCC----------CCCCC--HHHHHHH-----------------
Q 018508 85 TLYGLFLLSFSPTLAEISGLAGYDFV--------VVDME----------HGPGG--ISDALAC----------------- 127 (355)
Q Consensus 85 ~~~gl~v~~~sp~~~e~aa~~G~D~v--------ilDlE----------h~~~~--~~~a~~~----------------- 127 (355)
+.+.+++|+.+|+.++++...|+|.| |+|.| +...+ +..++++
T Consensus 483 ~~~~l~~n~~~p~~~~~a~~~gadGIGL~RtE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~~~~~ 562 (794)
T 2ols_A 483 APVKVMMNVGNPELAFSFANLPSEGIGLARMEFIINRQIGIHPKALLEFDKQDDELKAEITRRIAGYASPVDFYVDKIAE 562 (794)
T ss_dssp CSSEEEEEECCGGGHHHHHSSCCSEEEEECSHHHHHHTTCBCHHHHHTGGGSCHHHHHHHHHHTTTSSSHHHHHHHHHHH
T ss_pred ceEEEEEeCCCHHHHHHHHhcCCCeeeeeeeHHHHhhhhhhhhhhhhhcccCChHHHHHHHHhhccccchHHHHHHHHHH
Confidence 56799999999999999999999999 99985 32111 1112221
Q ss_pred -HHHH--HhCCCCeEEcCCCCCHH------------------------------------------HHHHHHh-cC--CC
Q 018508 128 -LHAL--AATGTPAILRLPESCPT------------------------------------------WAKKALD-LG--PQ 159 (355)
Q Consensus 128 -i~a~--~~~g~~~iVRV~~~~~~------------------------------------------~i~~aLd-aG--a~ 159 (355)
++.+ ...+.+++||+++.... .|.++++ .| +.
T Consensus 563 ~~~~~~~~~~~~pv~iR~~D~~~~~~~~~~gg~~~~~~E~NP~lG~Rg~r~~~~~p~~~~~~~ql~Ai~ra~~~~G~~~~ 642 (794)
T 2ols_A 563 GVATLAASVYPRKTIVRMSDFKSNEYANLVGGNVYEPHEENPMLGFRGAARYVADNFKDCFALECKALKRVRDEMGLTNV 642 (794)
T ss_dssp HHHHHHHHHTTSEEEEECCCCCHHHHHTSBTCGGGSCCCSCGGGSSCTHHHHHCTTTHHHHHHHHHHHHHHHHTSCCTTE
T ss_pred HHHHHHHHhCCCcEEEEeCCCCchhhHHHhcCccccccccCCCcCccceeeeeccchhHHHHHHHHHHHHHHHhcCCCCc
Confidence 1121 23578999999994322 2467888 68 78
Q ss_pred eEeecCCCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEEccHHHHHHHHHHhccCCccE
Q 018508 160 GVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKRAEDIAAVDGVDC 239 (355)
Q Consensus 160 GImvP~Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mIET~~av~nieeIaavpgVD~ 239 (355)
+||+|||+|++|++++++.++|. |. . + .++.+.+++|||||+|+.|+++||+. +|+
T Consensus 643 ~ImvP~V~t~~E~~~~~~~l~~~--g~---~--------~---------~~~~~~vg~MIEtp~a~~~ad~ia~~--vD~ 698 (794)
T 2ols_A 643 EIMIPFVRTLGEAEAVVKALKEN--GL---E--------R---------GKNGLRLIMMCELPSNAVLAEQFLQY--FDG 698 (794)
T ss_dssp EEEECCCCSHHHHHHHHHHHHHT--TC---C--------T---------TGGGCCEEEEECSHHHHHTHHHHHTT--SSE
T ss_pred eEEecCCCCHHHHHHHHHHHHhc--Cc---c--------c---------CccCCEEEEEECcHHHHHHHHHHHHh--CCE
Confidence 99999999999999999999874 21 0 0 01247899999999999999999985 999
Q ss_pred EEEChhhHHhh-cCCC---------CCCCCHHHHHHHHHHHHHHHhCCCce--eecccC-CchhHHHHHHCCCCEEEecc
Q 018508 240 VQMGPLDLSAS-MGYL---------WDPGHRKVREMMRVAEKGVLGGGKAY--LAGFAM-PHDAPLEMKSRGYHMVSGAV 306 (355)
Q Consensus 240 l~iGp~DLs~s-lG~~---------~~~~~p~v~~ai~~iv~aa~a~g~~~--~g~~~~-d~~~a~~~~~~G~~~vs~~~ 306 (355)
++||+|||+++ ||+. +++.||.|.+++++++.+|+++|+++ ||.+++ +++.++.++++||+++++++
T Consensus 699 ~siGtnDLtq~tlg~~R~~~~~~~~~~~~~p~v~~~i~~~v~aar~~g~~vgicGe~~~~dp~~~~~~~~~G~~~~s~~p 778 (794)
T 2ols_A 699 FSIGSNDMTQLTLGLDRDSGLVSESFDERNPAVKVMLHLAISACRKQNKYVGICGQGPSDHPDFAKWLVEEGIESVSLNP 778 (794)
T ss_dssp EEEEHHHHHHHHHTCCTTCTTTGGGCCTTSHHHHHHHHHHHHHHHTTTCEEEEESSHHHHCHHHHHHHHHHTCCEEEECG
T ss_pred EEECHHHHHHHHhCCCCCcchhccccCCCCHHHHHHHHHHHHHHHHhCCEEEEecccCCCCHHHHHHHHHCCCCEEEECH
Confidence 99999999999 9976 56779999999999999999999873 555666 88999999999999999999
Q ss_pred hHHHHHHH
Q 018508 307 DVGLFRSA 314 (355)
Q Consensus 307 D~~ll~~~ 314 (355)
|...+.+.
T Consensus 779 ~~v~~~~~ 786 (794)
T 2ols_A 779 DTVIETWL 786 (794)
T ss_dssp GGHHHHHH
T ss_pred hHHHHHHH
Confidence 98866443
No 16
>1vbg_A Pyruvate,orthophosphate dikinase; transferase, maize, riken structural genomics/proteomics INI RSGI, structural genomics; 2.30A {Zea mays} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1vbh_A*
Probab=99.76 E-value=1.6e-18 Score=187.24 Aligned_cols=212 Identities=18% Similarity=0.162 Sum_probs=155.1
Q ss_pred cEEEEEEecCCHHHHHHhhhcCCcEE-EEeCCCCCCCHH----H------------------------HHHHHHHHH-hC
Q 018508 85 TLYGLFLLSFSPTLAEISGLAGYDFV-VVDMEHGPGGIS----D------------------------ALACLHALA-AT 134 (355)
Q Consensus 85 ~~~gl~v~~~sp~~~e~aa~~G~D~v-ilDlEh~~~~~~----~------------------------a~~~i~a~~-~~ 134 (355)
+.+.+++|+.+|..++.+...|+|.| ++-.||--.+.+ . .......++ ..
T Consensus 535 ~~~~v~aN~~~p~da~~a~~~ga~GIGL~RtE~mf~~~~~~~~~~~~mi~~~~~~~r~~~l~~l~~~q~~~y~~i~~a~~ 614 (876)
T 1vbg_A 535 RKLKVLANADTPDDALTARNNGAQGIGLCRTEHMFFASDERIKAVRQMIMAPTLELRQQALDRLLPYQRSDFEGIFRAMD 614 (876)
T ss_dssp CCSEEEEECSSHHHHHHHHHTTCCSEEEEEHHHHHTTCHHHHHHHHHHHHCSSHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ceeEEEEecCCHHHHHHHHhCCCcceeehhhHHHHhhcccCCCcHHHHhhcCchhhHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 56799999999999999999999763 445555422111 1 111111122 46
Q ss_pred CCCeEEcCCCC---------------------------------------CH--------------H----HHHHHHh--
Q 018508 135 GTPAILRLPES---------------------------------------CP--------------T----WAKKALD-- 155 (355)
Q Consensus 135 g~~~iVRV~~~---------------------------------------~~--------------~----~i~~aLd-- 155 (355)
|.+++||.-+. +| + +++++++
T Consensus 615 ~~pV~iR~lD~p~~eflp~~~~~~~~~~~G~d~~~~~~k~~~~~~~~~E~NP~LG~RG~Rl~l~~peif~~QlrAi~~Aa 694 (876)
T 1vbg_A 615 GLPVTIRLLDPPLHEFLPEGNIEDIVSELCAETGANQEDALARIEKLSEVNPMLGFRGCRLGISYPELTEMQARAIFEAA 694 (876)
T ss_dssp TSEEEEECCCSCGGGGSCCSCHHHHHHHHHHHHCCCHHHHHHHHHHHCCSCGGGSSCTHHHHHHSHHHHHHHHHHHHHHH
T ss_pred CCcEEEEecCCcccccccchhHHHHHHHcCCCccchhhhhhhhccCccCCCCcccccccccccCChHHHHHHHHHHHHHH
Confidence 88999999872 01 0 1223332
Q ss_pred -----cCCC---eEeecCCCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEEccHHHHHH
Q 018508 156 -----LGPQ---GVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKR 227 (355)
Q Consensus 156 -----aGa~---GImvP~Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mIET~~av~n 227 (355)
.|.. +||+|||++++|++.+.+.+++.- +.. + ..+|. ..++.+++|||||.|+.+
T Consensus 695 ~~~~~~G~~~~~~ImiP~V~t~~E~~~~~~~i~~~~---~~~-----~-~~~G~--------~~~~~vg~MIEtP~a~l~ 757 (876)
T 1vbg_A 695 IAMTNQGVQVFPEIMVPLVGTPQELGHQVTLIRQVA---EKV-----F-ANVGK--------TIGYKVGTMIEIPRAALV 757 (876)
T ss_dssp HHHHTTTCCCEEEEEECSCCSHHHHHHHHHHHHHHH---HHH-----H-HHHTC--------CCCCEEEEEECSHHHHHT
T ss_pred HHHHhcCCCCCeEEEEcCCCCHHHHHHHHHHHHHHH---HHH-----H-HhcCC--------CcCcEEEEEEccHHHHHH
Confidence 2643 799999999999999998876420 000 0 00111 125789999999999999
Q ss_pred HHHHhccCCccEEEEChhhHHhh-cCCCC------------------CCCC----HHHHHHHHHHHHHHHhC--CCc--e
Q 018508 228 AEDIAAVDGVDCVQMGPLDLSAS-MGYLW------------------DPGH----RKVREMMRVAEKGVLGG--GKA--Y 280 (355)
Q Consensus 228 ieeIaavpgVD~l~iGp~DLs~s-lG~~~------------------~~~~----p~v~~ai~~iv~aa~a~--g~~--~ 280 (355)
+++||+. +|+++||+|||+|. ||... +|.| |.|.+++++++++|+++ |++ +
T Consensus 758 adeIA~~--vDf~siGtNDLtQ~~lg~dR~~~~~~~~~~~~~~i~~~dp~~~ld~paV~~li~~~~~~~~~~~~g~~vgi 835 (876)
T 1vbg_A 758 ADEIAEQ--AEFFSFGTNDLTQMTFGYSRDDVGKFIPVYLAQGILQHDPFEVLDQRGVGELVKFATERGRKARPNLKVGI 835 (876)
T ss_dssp HHHHTTT--CSEEEECHHHHHHHHHTCCTTTGGGTHHHHHHTTSCSSCTTTSCCTTTHHHHHHHHHHHHHHHSTTCEEEE
T ss_pred HHHHHHh--CCEEEECHHHHHHHHhCCCCCchhhhHHHHhhcccccCCcccccchHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 9999974 99999999999976 68753 5667 99999999999999986 666 5
Q ss_pred eecccCCchhHHHHHHCCCCEEEecchHHHHHHHH
Q 018508 281 LAGFAMPHDAPLEMKSRGYHMVSGAVDVGLFRSAA 315 (355)
Q Consensus 281 ~g~~~~d~~~a~~~~~~G~~~vs~~~D~~ll~~~~ 315 (355)
||..+++|+.++.++++|++.+|++++.+.+.+-+
T Consensus 836 CGe~~gdP~~~~~l~~~Gl~~vS~sp~~v~~~rla 870 (876)
T 1vbg_A 836 CGEHGGEPSSVAFFAKAGLDYVSCSPFRVPIARLA 870 (876)
T ss_dssp ESGGGGSHHHHHHHHHTTCSEEEECGGGHHHHHHH
T ss_pred cCCcCCCHHHHHHHHHcCCCEEEECcchHHHHHHH
Confidence 88888899999999999999999999998776544
No 17
>3cux_A Malate synthase; TIM barrel, glyoxylate bypass, transferase, tricarboxylic acid cycle; 1.70A {Bacillus anthracis}
Probab=99.74 E-value=5.5e-18 Score=173.58 Aligned_cols=210 Identities=14% Similarity=0.027 Sum_probs=144.6
Q ss_pred CcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCC--CCCHH--HHHHHHH-HHHh--------C--------CCCeEEcC
Q 018508 84 ETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHG--PGGIS--DALACLH-ALAA--------T--------GTPAILRL 142 (355)
Q Consensus 84 ~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~--~~~~~--~a~~~i~-a~~~--------~--------g~~~iVRV 142 (355)
.+..-+|+|.++ .+++++..+|+|.+++|+||+ |..+. +++..+. +++. + +...+||+
T Consensus 85 ~RR~~l~~P~~~-km~~kAl~sgAd~vi~DlEDSVap~wk~~~~ar~~l~~al~~~~~~~~~~G~~~~l~~~~~~l~VR~ 163 (528)
T 3cux_A 85 DRRVEITGPVDR-KMVINALNSGAHLFMADFEDSNSPTWENAIEGQINLRDAVKGTISHKNENGKEYRLNSKTAVLIVRP 163 (528)
T ss_dssp CCSEEEEEESCH-HHHHHHHTSSCSEEEEESSTTSCCCHHHHHHHHHHHHHHHHTCCCEECTTSCEECCCSSCCEEEEEC
T ss_pred cCeeEEECCCCH-HHHHHHHhcCCCEEEeccccCCCccccchHHHHHHHHHHHhccccccCCCCceeecCCCCcEEEEEe
Confidence 345678899966 999999999999999999999 44566 6666554 3331 1 24689999
Q ss_pred CCCCHH-------------H-----------HHHHH--hcCCCeEeecCCCCHHHHHHHHHHcCCCCCCCCCCccccccc
Q 018508 143 PESCPT-------------W-----------AKKAL--DLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRA 196 (355)
Q Consensus 143 ~~~~~~-------------~-----------i~~aL--daGa~GImvP~Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra 196 (355)
|+.+.. . ++.++ ..|. +|++||+++++|++.+.+.+.+...
T Consensus 164 ng~~~~e~~v~~dg~~v~~~l~D~~l~~~hdl~~l~~~~~gp-yi~LPK~es~~Ev~~~~~lf~~~E~------------ 230 (528)
T 3cux_A 164 RGWHLEEKHMQVDGKNMSGSLVDFGLYFFHNAKALLEKGSGP-YFYLPKMESYLEARLWNDVFVFAQK------------ 230 (528)
T ss_dssp CCTTCEEEEEEETTEEEEHHHHHHHHHHHHHHHHHHHTTCCC-EEEECCCCSHHHHHHHHHHHHHHHH------------
T ss_pred CCCCCCcchhccCCcccchHHHHHHHHHHHHHHHHHhcCCCC-EEEccCCCCHHHHHHHHHHHHHHHH------------
Confidence 997532 1 34455 3466 9999999999999988777643210
Q ss_pred ccCCCCccccccCCCceEEEEEEccHHHHHHHHHHhc--cCCccEEEEChhhHHhhcCCCC----C----------CCCH
Q 018508 197 SGYGIDEGYLSNYEEELLIMCQVESEEGVKRAEDIAA--VDGVDCVQMGPLDLSASMGYLW----D----------PGHR 260 (355)
Q Consensus 197 ~~~g~~~~y~~~~n~~i~vi~mIET~~av~nieeIaa--vpgVD~l~iGp~DLs~slG~~~----~----------~~~p 260 (355)
..| -..+.+.+.+||||+.|+.|++||+. .+++.++.+|..||+.|++... + ...|
T Consensus 231 -~lG-------lp~gtIki~vlIET~~a~~n~~eI~~a~~~rv~gLn~G~~Dy~~s~i~t~~~~~~~vlpdR~~v~~~~p 302 (528)
T 3cux_A 231 -YIG-------IPNGTIKATVLLETIHASFEMDEILYELKDHSAGLNCGRWDYIFSFLKAFRNHNEFLLPDRAQVTMTAP 302 (528)
T ss_dssp -HHT-------CCTTCCEEEEEECSHHHHTSHHHHHHHTGGGEEEEEECSHHHHHHHHHHTTTCTTCCCCCGGGCCTTSH
T ss_pred -HhC-------CCCCceEEEEEeCCHHHHHhHHHHHHhccCceeEEecCHHHHHHHhhhhccCCccccchhhhhcccccH
Confidence 011 11346899999999999999999993 4799999999999999986321 1 1234
Q ss_pred HHHHHHHHHHHHHHhCCCceeecccCC------c-----------hhHHHHHHCCCCE--EEecchHHHHHHHH
Q 018508 261 KVREMMRVAEKGVLGGGKAYLAGFAMP------H-----------DAPLEMKSRGYHM--VSGAVDVGLFRSAA 315 (355)
Q Consensus 261 ~v~~ai~~iv~aa~a~g~~~~g~~~~d------~-----------~~a~~~~~~G~~~--vs~~~D~~ll~~~~ 315 (355)
.+....+.++.+|+++|+..+||++.. + ++..+-..+||++ +.+...+.+..+.+
T Consensus 303 ~~~ay~~~lV~ac~a~G~~aIgGm~a~ip~~~D~~~n~~~~~~~~~dk~~~~~~GfdGkwviHP~qv~~a~~vF 376 (528)
T 3cux_A 303 FMRAYSLKVIQTCHRRNAPAIGGMAAQIPIKNNPEANEAAFEKVRADKEREALDGHDGTWVAHPGLVPVAMEVF 376 (528)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEC-------------------CHHHHHHHHHHHHTCSBEEESSGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCCcccccccCcCcCChHHHHHHHHHHHHHHHHHHhCCCCcccccCHHHHHHHHHHH
Confidence 445555567799999999888887554 2 1223457899996 44445555543333
No 18
>3cuz_A MSA, malate synthase A; TIM barrel, cytoplasm, glyoxylate bypass, transferase, tricarboxylic acid cycle; 1.04A {Escherichia coli} PDB: 3cv1_A 3cv2_A*
Probab=99.73 E-value=1.4e-17 Score=170.84 Aligned_cols=212 Identities=13% Similarity=0.028 Sum_probs=149.9
Q ss_pred cEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCC--CCCHH--HHHHHHHHH-Hh-------------------------C
Q 018508 85 TLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHG--PGGIS--DALACLHAL-AA-------------------------T 134 (355)
Q Consensus 85 ~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~--~~~~~--~a~~~i~a~-~~-------------------------~ 134 (355)
+..-+|+|.++ +++.++..+|+|.+++|+||+ |..|. .++..+..+ .. .
T Consensus 89 rRs~L~~P~~r-km~~kAl~sgAD~vi~DlEDaVap~~k~~~~ar~~l~~al~~~~~~~~~~G~~~~l~~~~~~l~vR~~ 167 (532)
T 3cuz_A 89 RRVEITGPVER-KMVINALNANVKVFMADFEDSLAPDWNKVIDGQINLRDAVNGTISYTNEAGKIYQLKPNPAVLICRVR 167 (532)
T ss_dssp CSEEEEEECCH-HHHHHHHTSSSSEEEEESSTTCCCCHHHHHHHHHHHHHHHTTCCEEECTTSCEEECCSSCCEEEEECC
T ss_pred ceeEEEccCCH-HHHHHHHhcCCCEEEEcCccCCCccccchHHHHHHHHHHHhccCcccCCCCceeeccCCcceeeeecC
Confidence 34578899988 999999999999999999999 45577 777766543 22 1
Q ss_pred C---CCeEEcCCCCCHH------------HHHHHHhcC-CCeEeecCCCCHHHHHHHHHHcCCCCCCCCCCccccccccc
Q 018508 135 G---TPAILRLPESCPT------------WAKKALDLG-PQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASG 198 (355)
Q Consensus 135 g---~~~iVRV~~~~~~------------~i~~aLdaG-a~GImvP~Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~ 198 (355)
| ....||||+.+.. .++.++..| ..+|++||+++++|++.+.+.+.+... .
T Consensus 168 g~~~~e~~VRiNg~~~p~~l~D~~l~~~~Dl~~l~~~g~g~~i~LPK~es~~Ev~~~~~~f~~~E~-------------~ 234 (532)
T 3cuz_A 168 GLHLPEKHVTWRGEAIPGSLFDFALYFFHNYQALLAKGSGPYFYLPKTQSWQEAAWWSEVFSYAED-------------R 234 (532)
T ss_dssp CTTCEEEEEEETTEEEEHHHHHHHHHHHHHHHHHHHTTCCCEEEECCCCCHHHHHHHHHHHHHHHH-------------H
T ss_pred CCCCCeeEEEECCCcCchHHHHHHHHHHHHHHHHHcCCCCCeEEccCCCCHHHHHHHHHHHHHHHH-------------h
Confidence 1 2367888886532 244555544 389999999999999988776643210 0
Q ss_pred CCCCccccccCCCceEEEEEEccHHHHHHHHHHhc--cCCccEEEEChhhHHhhcCCCC----C---C------CCHHHH
Q 018508 199 YGIDEGYLSNYEEELLIMCQVESEEGVKRAEDIAA--VDGVDCVQMGPLDLSASMGYLW----D---P------GHRKVR 263 (355)
Q Consensus 199 ~g~~~~y~~~~n~~i~vi~mIET~~av~nieeIaa--vpgVD~l~iGp~DLs~slG~~~----~---~------~~p~v~ 263 (355)
.| -..+.+.+++||||+.|+.|++||+. .+++.++.+|..||+.++.... + + ....+.
T Consensus 235 lG-------lp~gtiki~vlIET~~a~~n~~eIa~al~~rv~gLn~G~~Dy~~s~i~~~~~~~~~~lpdr~~~~~~~~~l 307 (532)
T 3cuz_A 235 FN-------LPRGTIKATLLIETLPAVFQMDEILHALRDHIVGLNCGRWDYIFSYIKTLKNYPDRVLPDRQAVTMDKPFL 307 (532)
T ss_dssp TT-------CCTTCSEEEEECCSHHHHTSHHHHHHHTTTTEEEEECCSHHHHHHHHHHTTTCGGGCCCCGGGCCTTSHHH
T ss_pred cC-------CCCCceEEEEEeccHHHHHhHHHHHHhccCCceEEEcCHHHHHHHHHhhcccCCCccCccccccccchHHH
Confidence 01 01246889999999999999999995 5999999999999999983211 0 1 022477
Q ss_pred HHHHHHH-HHHHhCCCceeecccC--C---ch-----------hHHHHHHCCCCE--EEecchHHHHHHHHHH
Q 018508 264 EMMRVAE-KGVLGGGKAYLAGFAM--P---HD-----------APLEMKSRGYHM--VSGAVDVGLFRSAAVE 317 (355)
Q Consensus 264 ~ai~~iv-~aa~a~g~~~~g~~~~--d---~~-----------~a~~~~~~G~~~--vs~~~D~~ll~~~~~~ 317 (355)
.++.+++ .+|+++|+..+||++. + ++ ++..-..+||++ +.+...+.+.++.+..
T Consensus 308 ~Ay~~llv~ac~a~G~~aIdGm~a~~p~kD~e~~~~~~~~l~~dk~~~~~~GfdGkwviHP~qv~~~n~~F~~ 380 (532)
T 3cuz_A 308 NAYSRLLIKTCHKRGAFAMGGMAAFIPSKDEEHNNQVLNKVKADKSLEANNGHDGTWIAHPGLADTAMAVFND 380 (532)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEECBCCCSSGGGCHHHHHHHHHHHHHHHHHTCSEEEESSGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCccCccccCCCCChhHHHHHHHHHHHHHHHHHHCCCCccccCCHHHHHHHHHHHhh
Confidence 8888887 9999999988885322 2 22 234567899996 4445555555555543
No 19
>1a3w_A Pyruvate kinase; allosteric regulation, tranferase, transfer; HET: FBP; 3.00A {Saccharomyces cerevisiae} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1a3x_A
Probab=99.72 E-value=6.1e-18 Score=172.74 Aligned_cols=128 Identities=14% Similarity=0.098 Sum_probs=109.6
Q ss_pred HHHHHHHHhcCCCeEeecCCCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEEccHHHHH
Q 018508 147 PTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVK 226 (355)
Q Consensus 147 ~~~i~~aLdaGa~GImvP~Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mIET~~av~ 226 (355)
...++++++.|+++|++|||++++|++++++++.. .+.++.+++||||++||+
T Consensus 196 ~~DI~~~l~~g~d~I~lpfV~saeDv~~~~~~l~~---------------------------~~~~i~IiakIEt~eav~ 248 (500)
T 1a3w_A 196 KEDLRFGVKNGVHMVFASFIRTANDVLTIREVLGE---------------------------QGKDVKIIVKIENQQGVN 248 (500)
T ss_dssp HHHHHHHHHHTCSEEEECSCCSHHHHHHHHHHHHH---------------------------HHTTSEEEEEECSSHHHH
T ss_pred HHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHHHh---------------------------cCCCcEEEEEECChHHHH
Confidence 45689999999999999999999999999987642 134689999999999999
Q ss_pred HHHHHhccCCccEEEEChhhHHhhcCCCCCCCCHHHHHHHHHHHHHHHhCCCceee--------cccCCch-----hHHH
Q 018508 227 RAEDIAAVDGVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVAEKGVLGGGKAYLA--------GFAMPHD-----APLE 293 (355)
Q Consensus 227 nieeIaavpgVD~l~iGp~DLs~slG~~~~~~~p~v~~ai~~iv~aa~a~g~~~~g--------~~~~d~~-----~a~~ 293 (355)
|++||+++ +|+|+||++||+.++| ++++..++++++.+|+++|++++. .....|. ++..
T Consensus 249 nldeI~~~--~DgImvgrgDLgvelg------~~~v~~aqk~ii~aaraaGkpvi~ATQMLeSMi~~~~ptraEvsdva~ 320 (500)
T 1a3w_A 249 NFDEILKV--TDGVMVARGDLGIEIP------APEVLAVQKKLIAKSNLAGKPVICATQMLESMTYNPRPTRAEVSDVGN 320 (500)
T ss_dssp SHHHHHHH--SSEEEECHHHHHHHTT------GGGHHHHHHHHHHHHHHHTCCEEECSSTTGGGGSCSSCCHHHHHHHHH
T ss_pred hHHHHHHh--CCEEEECchHhhhhcC------cHHHHHHHHHHHHHHHhcCCCEEEEeehhhhhccCCCchHHHHHHHHH
Confidence 99999985 7999999999999998 467999999999999999987542 2344455 5578
Q ss_pred HHHCCCCEEEecchHH
Q 018508 294 MKSRGYHMVSGAVDVG 309 (355)
Q Consensus 294 ~~~~G~~~vs~~~D~~ 309 (355)
++..|++++.++.|+.
T Consensus 321 av~~G~d~vmLs~eta 336 (500)
T 1a3w_A 321 AILDGADCVMLSGETA 336 (500)
T ss_dssp HHHHTCSEECBSTTTT
T ss_pred HHHhCCCEEEecchhh
Confidence 8899999999999974
No 20
>1kbl_A PPDK, pyruvate phosphate dikinase; transferase, phosphotransferase; 1.94A {Clostridium symbiosum} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1kc7_A* 1dik_A 1ggo_A 1jde_A 2dik_A 2r82_A 2fm4_A
Probab=99.70 E-value=2.4e-16 Score=170.19 Aligned_cols=212 Identities=16% Similarity=0.092 Sum_probs=155.3
Q ss_pred cEEEEEEecCCHHHHHHhhhcCCcE-EEEeCCCCCCCH---HHHHH------------------------HHHHH-HhCC
Q 018508 85 TLYGLFLLSFSPTLAEISGLAGYDF-VVVDMEHGPGGI---SDALA------------------------CLHAL-AATG 135 (355)
Q Consensus 85 ~~~gl~v~~~sp~~~e~aa~~G~D~-vilDlEh~~~~~---~~a~~------------------------~i~a~-~~~g 135 (355)
+.+.+++|+.+|..++.+...|+|. -++-.||--.+. ...++ ....+ ...|
T Consensus 531 ~~~~v~aN~~~p~da~~a~~~ga~GIGL~RtE~mf~~~~~~~~~~~mi~~~~~~~r~~~l~~l~~~q~~~y~~i~~a~~~ 610 (873)
T 1kbl_A 531 RTLKVRTNADTPEDTLNAVKLGAEGIGLCRTEHMFFEADRIMKIRKMILSDSVEAREEALNELIPFQKGDFKAMYKALEG 610 (873)
T ss_dssp CCSEEEEECCSHHHHHHHHHTTCCSEEEECCTHHHHSHHHHHHHHHHHHCCSHHHHHHHHHTTHHHHHHHHHHHHHHHTT
T ss_pred eEEEEEEecCCHHHHHHHHhCCCcceeehhhHHHHhhcccCCCHHHHhhcCchhhHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 5679999999999999999999987 456677753222 11111 11111 2478
Q ss_pred CCeEEcCCCC----------------------C---------------H--------------H----HHHHHHh---c-
Q 018508 136 TPAILRLPES----------------------C---------------P--------------T----WAKKALD---L- 156 (355)
Q Consensus 136 ~~~iVRV~~~----------------------~---------------~--------------~----~i~~aLd---a- 156 (355)
.+++||.-+. + | + +++++++ .
T Consensus 611 ~pV~iR~lD~pl~eflp~~~~~~~~~a~~~G~dk~~~~~~~~~~~E~NP~LG~RG~Rl~l~~peif~~QlrAi~~Aa~~~ 690 (873)
T 1kbl_A 611 RPMTVRYLDPPLHEFVPHTEEEQAELAKNMGLTLAEVKAKVDELHEFNPMMGHRGCRLAVTYPEIAKMQTRAVMEAAIEV 690 (873)
T ss_dssp CCEEEECCCSCGGGGSCCSHHHHHHHHHHHTCCHHHHHHHHHHHCCSCGGGSSCTHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEecCCcccccccchHHHHHHHHHHcCCCHHHHHHHhcCCcCCCCCcccceeccccCChHHHHHHHHHHHHHHHHH
Confidence 9999998775 0 1 0 1223332 1
Q ss_pred ----CC---CeEeecCCCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEEccHHHHHHHH
Q 018508 157 ----GP---QGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKRAE 229 (355)
Q Consensus 157 ----Ga---~GImvP~Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mIET~~av~nie 229 (355)
|. -+||+|||+|++|++.+.+.+++.-.... ..+|. ..++.+++|||||.|+.+++
T Consensus 691 ~~~~G~~~~~~ImiP~V~t~~E~~~~~~~i~~~~~~~~---------~~~g~--------~~~~~vg~MIEtP~a~l~ad 753 (873)
T 1kbl_A 691 KEETGIDIVPEIMIPLVGEKKELKFVKDVVVEVAEQVK---------KEKGS--------DMQYHIGTMIEIPRAALTAD 753 (873)
T ss_dssp HHHHCCCCCCEEEECSCCSHHHHHHHHHHHHHHHHHHH---------HHHTC--------CCCCEEEEEECSHHHHHTHH
T ss_pred HHhcCCCCCEEEEEecCCCHHHHHHHHHHHHHHHHHHH---------HhcCC--------CcCcEEEEEEccHHHHHHHH
Confidence 64 38999999999999999888764300000 00111 12578999999999999999
Q ss_pred HHhccCCccEEEEChhhHHhh-cCCC------------------CCCCC----HHHHHHHHHHHHHHHhC--CCc--eee
Q 018508 230 DIAAVDGVDCVQMGPLDLSAS-MGYL------------------WDPGH----RKVREMMRVAEKGVLGG--GKA--YLA 282 (355)
Q Consensus 230 eIaavpgVD~l~iGp~DLs~s-lG~~------------------~~~~~----p~v~~ai~~iv~aa~a~--g~~--~~g 282 (355)
+||+ .+|+++||+|||+|. ||.. .+|.| |.|.+++++++++|+++ |++ +||
T Consensus 754 ~iA~--~vdf~siGtNDLtQ~~lg~dR~~~~~~~~~~~~~~i~~~dp~~~ld~paV~~li~~~~~~~~~~~~g~~vgiCG 831 (873)
T 1kbl_A 754 AIAE--EAEFFSFGTNDLTQMTFGFSRDDAGKFLDSYYKAKIYESDPFARLDQTGVGQLVEMAVKKGRQTRPGLKCGICG 831 (873)
T ss_dssp HHTT--TCSEEEECHHHHHHHHHTCCHHHHHHHHHHHHHTTSCSSCTTTSCCTTTHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred HHHH--hCCEEEECHHHHHHHHhCCCCCchhhhHHHHHhccccccCchhhhchHHHHHHHHHHHHHHHHhCCCCeEEECC
Confidence 9997 499999999999964 5653 25667 99999999999999986 665 588
Q ss_pred cccCCchhHHHHHHCCCCEEEecchHHHHHHHH
Q 018508 283 GFAMPHDAPLEMKSRGYHMVSGAVDVGLFRSAA 315 (355)
Q Consensus 283 ~~~~d~~~a~~~~~~G~~~vs~~~D~~ll~~~~ 315 (355)
..+++|+.++.++++|++.+|++++.+...+-+
T Consensus 832 e~~gdP~~~~~l~~~Gl~~vS~sp~~v~~~rla 864 (873)
T 1kbl_A 832 EHGGDPSSVEFCHKVGLNYVSCSPFRVPIARLA 864 (873)
T ss_dssp GGGGSHHHHHHHHHTTCSEEEECGGGHHHHHHH
T ss_pred CCCCCHHHHHHHHHcCCCEEEEChhHHHHHHHH
Confidence 888899999999999999999999998765544
No 21
>1h6z_A Pyruvate phosphate dikinase; transferase, tropical parasite, trypanosome; 3.00A {Trypanosoma brucei} PDB: 2x0s_A
Probab=99.66 E-value=3.6e-15 Score=161.18 Aligned_cols=212 Identities=18% Similarity=0.123 Sum_probs=151.5
Q ss_pred cEEEEEEecCCHHHHHHhhhcCCcEE-EEeCCCCCCC---HHHHHH------------------------HHHHHH-hCC
Q 018508 85 TLYGLFLLSFSPTLAEISGLAGYDFV-VVDMEHGPGG---ISDALA------------------------CLHALA-ATG 135 (355)
Q Consensus 85 ~~~gl~v~~~sp~~~e~aa~~G~D~v-ilDlEh~~~~---~~~a~~------------------------~i~a~~-~~g 135 (355)
+.+.+++|+.+|+.++.+...|+|.| ++-.||--.+ ....++ ....++ ..|
T Consensus 558 ~~~~v~aN~~~p~da~~a~~~gaeGIGL~RTEfmf~~~~~~p~~~~mi~a~~eee~~~al~~l~~~Q~~~y~~i~~a~~g 637 (913)
T 1h6z_A 558 KRLGVRTNADTPADAAKARSFGAEGVGLCRTEHMFFEGSRINFIREMILADSASGRKAALDKLLPIQRADFVGILRAMRG 637 (913)
T ss_dssp CCSEEEEECSSHHHHHHHHTTTCCSEEECBCSGGGSTTTHHHHHHHHHSCSSHHHHHHHHHHHHHHHHHHHHHHHTTTSS
T ss_pred eEEEEEEeCCCHHHHHHHHhCCCceeccCccHHHhhcCccCccHHHHhcCCCHHHHHHHHHHhhhhhHHHHHHHHHHcCC
Confidence 56899999999999999999999764 5566775322 111111 111111 468
Q ss_pred CCeEEcCCCC-------------------------------------CH------------------HHHHHHHhc----
Q 018508 136 TPAILRLPES-------------------------------------CP------------------TWAKKALDL---- 156 (355)
Q Consensus 136 ~~~iVRV~~~-------------------------------------~~------------------~~i~~aLda---- 156 (355)
.+++||.-+. +| .++++++++
T Consensus 638 ~PV~IRtlD~pl~eflp~~~~~~~e~a~~~G~~~dk~~~~~~~~~E~NPmLG~RG~Rl~l~~peif~~QlrAi~rAa~~~ 717 (913)
T 1h6z_A 638 LPVTIRLLDPPLHEFVPHDAAAQFELAQKLGMPAEKVRNRVNALHELNPMLGHRGCRLGITYPEIYNMQVRAIIEAAIAV 717 (913)
T ss_dssp SCEEEECCCSCGGGGCCSSCSSTTTTSCSSSCCHHHHHHHHHSSCCSSSTTSSCHHHHHHHSTTHHHHHHHHHHHHHHHH
T ss_pred CeEEEECCCCcccccCCchhhHHHHHHHHcCCCHHHHHhhhcCCCCCCCCCccchhccCCCChHHHHHHHHHHHHHHHHH
Confidence 8999997552 01 012333332
Q ss_pred ---CCC---eEeecCCCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEEccHHHHHHHHH
Q 018508 157 ---GPQ---GVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKRAED 230 (355)
Q Consensus 157 ---Ga~---GImvP~Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mIET~~av~niee 230 (355)
|.. .||+|||.+++|++.+.+.+...-... . ...|. ...+.+++|||+|.++..+++
T Consensus 718 ~~~G~~~~~~IMiPmV~t~~E~~~~~~~i~~~~~el--------~-~e~g~--------~~~~~vG~MiEvPsaal~ad~ 780 (913)
T 1h6z_A 718 SEEGSSVIPEIMVPLVGKKEELSLIREEVVKTAEAV--------I-TKSGK--------RVHYTVGTMIEVPRAAVTADS 780 (913)
T ss_dssp HTTTCCCCEEEEECCCCSHHHHHHHHHHHHHHHHHH--------H-HHSCS--------CCCCEEEEEECSHHHHHTHHH
T ss_pred HhcCCCCCeEEEecCCCCHHHHHHHHHHHHHHHHHH--------H-HhcCC--------CCCceEEEEecchHHHHHHHH
Confidence 643 799999999999987777643100000 0 00011 124789999999999999999
Q ss_pred HhccCCccEEEEChhhHHhh-cCCCC------------------CCCC----HHHHHHHHHHHHHHHh--CCCc--eeec
Q 018508 231 IAAVDGVDCVQMGPLDLSAS-MGYLW------------------DPGH----RKVREMMRVAEKGVLG--GGKA--YLAG 283 (355)
Q Consensus 231 IaavpgVD~l~iGp~DLs~s-lG~~~------------------~~~~----p~v~~ai~~iv~aa~a--~g~~--~~g~ 283 (355)
|++ .+|+++||+|||+|. ||+.. +|.| |.|.++++.++++|++ +|++ +||.
T Consensus 781 ia~--~~DFfSiGTNDLTQ~tlg~dRd~~~~~l~~y~~~~i~~~dPf~~ld~paV~~lI~~ai~~a~~~~~g~~vgICGE 858 (913)
T 1h6z_A 781 IAQ--KADFFSFGTNDLTQMGCGFSRDDAGPFLRHYGNLGIYAQDPFQSIDQEGIGELVRIAVTKGRRVKPMLKMGICGE 858 (913)
T ss_dssp HTT--TCSEEEECTTHHHHHHHTCCGGGCHHHHTTTTTTCSSSSCTTTSCCTTTHHHHHHHHHHHHHHHSTTCEEEECSG
T ss_pred HHH--hCCEEEEChHHHHHHHhccCCCchHHHHHHHHhccccccCcccccChHHHHHHHHHHHHHHHhcCCCCEEEEcCC
Confidence 997 599999999999996 46532 3333 9999999999999997 4665 5888
Q ss_pred ccCCchhHHHHHHCCCCEEEecchHHHHHHHH
Q 018508 284 FAMPHDAPLEMKSRGYHMVSGAVDVGLFRSAA 315 (355)
Q Consensus 284 ~~~d~~~a~~~~~~G~~~vs~~~D~~ll~~~~ 315 (355)
.+++|+.+..++++|++.+|++++.+...+-+
T Consensus 859 ~~gdP~~~~~l~~~Gid~vS~sp~~Vp~arla 890 (913)
T 1h6z_A 859 HGGDPATIGFCHKVGLDYVSCSPFRVPVAIVA 890 (913)
T ss_dssp GGGCHHHHHHHHHHTCSEEEECGGGHHHHHHH
T ss_pred CCCCHHHHHHHHHcCCCEEEECchHHHHHHHH
Confidence 99999999999999999999999998765444
No 22
>2x0s_A Pyruvate phosphate dikinase; transferase, tropical parasite; 3.00A {Trypanosoma brucei}
Probab=99.62 E-value=3.5e-15 Score=162.29 Aligned_cols=207 Identities=18% Similarity=0.116 Sum_probs=145.4
Q ss_pred cEEEEEEecCCHHHHHHhhhcCCcEE-EEeCCCCCCCHHH---HHH------------------------HHHHH-HhCC
Q 018508 85 TLYGLFLLSFSPTLAEISGLAGYDFV-VVDMEHGPGGISD---ALA------------------------CLHAL-AATG 135 (355)
Q Consensus 85 ~~~gl~v~~~sp~~~e~aa~~G~D~v-ilDlEh~~~~~~~---a~~------------------------~i~a~-~~~g 135 (355)
+.+.+++|+.+|..++.+...|+|.| ++-.||--.+... .++ ....+ ...|
T Consensus 558 ~~~~v~~N~~~p~da~~a~~~ga~GIGL~RtEf~f~~~~~~~~~~e~~~~~~~~~r~~~l~~l~~~q~~~~~~i~~a~~~ 637 (913)
T 2x0s_A 558 KRLGVRTNADTPADAAKARSFGAEGVGLCRTEHMFFEGSRINFIREMILADSASGRKAALDKLLPIQRADFVGILRAMRG 637 (913)
T ss_dssp CCSEEEEECCSHHHHHHHHTTTCCSEEEEESGGGTSTTHHHHHHHHHHHCSSHHHHHHHHHTTHHHHHHHHHHHHHHTSS
T ss_pred ceeeeeecCCCHHHHHHHHhCCCCCccccchHHHhhccccCCcHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 45789999999999999999999886 7888886433111 111 11111 2478
Q ss_pred CCeEEcCCCC-------------------------------------CH--------------H----HHHHHHhc----
Q 018508 136 TPAILRLPES-------------------------------------CP--------------T----WAKKALDL---- 156 (355)
Q Consensus 136 ~~~iVRV~~~-------------------------------------~~--------------~----~i~~aLda---- 156 (355)
.+++||.-+. +| + +++..+.+
T Consensus 638 ~pV~iRtlD~~~de~lp~~~~~~~e~~~~~~~~~e~~~~~~~~~~E~NPmLG~RGiR~~l~~peif~~Q~rAi~rA~~~~ 717 (913)
T 2x0s_A 638 LPVTIRLLDPPLHEFVPHDAAAQFELAQKLGMPAEKVRNRVNALHELNPMLGHRGCRLGITYPEIYNMQVRAIIEAAIAV 717 (913)
T ss_dssp SEEEEECCCSCGGGSCCSSCSSHHHHCCSSSCCTTTTSHHHHSSCCSSGGGSSCHHHHHHHSCHHHHHHHHHHHHHHHHH
T ss_pred CceEEEecccccccccCchhhHHHHHHhhhCCchHHHhhhcccccCCChhhhccchhhhccCcHHHHHHHHHHHHHHHHH
Confidence 8999998662 11 1 12333332
Q ss_pred ---CCC---eEeecCCCCHHHHHHHHHHcCCC--CC-CCCCCcccccccccCCCCccccccCCCceEEEEEEccHHHHHH
Q 018508 157 ---GPQ---GVMFPMIDSPEAAKEAVSYCRFP--PS-GVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKR 227 (355)
Q Consensus 157 ---Ga~---GImvP~Vesaeea~~vv~a~~~p--P~-G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mIET~~av~n 227 (355)
|.. -||+|||.+++|++.+.+.+... .. ..+ | .+..+.|++|||+|.++..
T Consensus 718 ~~~~~~~~~~IMiPmV~~~~E~~~~~~~v~~~~~~~~~~~------------g--------~~~~~~vG~MiEvPsaal~ 777 (913)
T 2x0s_A 718 SEEGSSVIPEIMVPLVGKKEELSLIREEVVKTAEAVITKS------------G--------KRVHYTVGTMIEVPRAAVT 777 (913)
T ss_dssp HHTTCCCEEEEEETTCCSHHHHHHHHHHHHHHHHHHHHHH------------C--------CCCCCEEEEEECSHHHHHT
T ss_pred HHhCCCCcEEEEeeecCCHHHHHHHHHHHHHHHHHHHHhc------------C--------CCCCCeEEEEEeHHHHHHH
Confidence 322 49999999999997665543210 00 000 1 1224689999999999999
Q ss_pred HHHHhccCCccEEEEChhhHHhh-cCCC------------------CCCCCH----HHHHHHHHHHHHHHhCC--C--ce
Q 018508 228 AEDIAAVDGVDCVQMGPLDLSAS-MGYL------------------WDPGHR----KVREMMRVAEKGVLGGG--K--AY 280 (355)
Q Consensus 228 ieeIaavpgVD~l~iGp~DLs~s-lG~~------------------~~~~~p----~v~~ai~~iv~aa~a~g--~--~~ 280 (355)
+++|+. .+||++||+|||+|. ||+. .++.|| .|...++.+++++|+.+ + .+
T Consensus 778 ad~~a~--~~DFfSiGTNDLTQ~tlg~DRd~~~~~~~~y~~~~~~~~dp~~~~~~~~v~~li~~a~~~gr~~~~~i~vgI 855 (913)
T 2x0s_A 778 ADSIAQ--KADFFSFGTNDLTQMGCGFSRDDAGPFLRHYGNLGIYAQDPFQSIDQEGIGELVRIAVTKGRRVKPMLKMGI 855 (913)
T ss_dssp HHHHGG--GCSEEEECTTHHHHHHHTCCGGGCHHHHHHHHHHTSSSSCTTTSCCTTTHHHHHHHHHHHHHHHSTTCEEEE
T ss_pred HHHHHH--HCCEEEECHhHHHHHHHHHhcCCchhhhhhhhhccccccCCCchhHHHHHHHHHHHHHHHhhhcCCCCeEEE
Confidence 999998 699999999999995 4543 244455 56677777777777654 2 26
Q ss_pred eecccCCchhHHHHHHCCCCEEEecchHHHHHH
Q 018508 281 LAGFAMPHDAPLEMKSRGYHMVSGAVDVGLFRS 313 (355)
Q Consensus 281 ~g~~~~d~~~a~~~~~~G~~~vs~~~D~~ll~~ 313 (355)
||..++||+.++.++++|++.+|++++.+...+
T Consensus 856 CGE~~gdP~~~~~L~~~Gid~~S~sP~~Vp~~r 888 (913)
T 2x0s_A 856 CGEHGGDPATIGFCHKVGLDYVSCSPFRVPVAI 888 (913)
T ss_dssp CSGGGGCHHHHHHHHHHTCSEEEECGGGHHHHH
T ss_pred eCCcccCHHHHHHHHHcCCCEEEEChHHHHHHH
Confidence 898999999999999999999999999876544
No 23
>1p7t_A MSG, malate synthase G; TIM barrel, glyoxylate cycle, acetyl-COA, cysteine-sulfenic lyase; HET: ACO PG4; 1.95A {Escherichia coli str} SCOP: c.1.13.1 PDB: 1y8b_A 1d8c_A* 2jqx_A
Probab=99.58 E-value=7.1e-15 Score=153.44 Aligned_cols=197 Identities=14% Similarity=-0.000 Sum_probs=136.1
Q ss_pred CCHHHHHHhhhcCCcEEEEeCCCCC-----CCHHHHHHHHHH--------------------HHh----C----------
Q 018508 94 FSPTLAEISGLAGYDFVVVDMEHGP-----GGISDALACLHA--------------------LAA----T---------- 134 (355)
Q Consensus 94 ~sp~~~e~aa~~G~D~vilDlEh~~-----~~~~~a~~~i~a--------------------~~~----~---------- 134 (355)
.+|..++++...|+|.+++||||+. .+|..+|..-.. +.. .
T Consensus 251 sdp~~l~kA~~~~AD~vIlDLEDSVApvda~dK~~AR~~W~~l~~G~l~~~~~k~g~~l~~aL~~~~~yt~~~G~~y~L~ 330 (731)
T 1p7t_A 251 DDPAHINDVIVEAAISTILDCEDSVAAVDAEDKILLYRNLLGLMQGTLQEKMEKNGRQIVRKLNDDRHYTAADGSEISLH 330 (731)
T ss_dssp GCTTCEEEEEEECCSEEEEESSTTCCCCSHHHHHHHHHHHHHHHHTCCEEEC-----CCEEECCCCEEEEETTSCEEEEC
T ss_pred CCHHHHHHHHhcCCCEEEeccccccCCCchhhHHHHHHhhhhhcccchhhhhccchHHHHHHHhcCCCccCCCCceeecC
Confidence 4778889999999999999999994 357788762111 110 0
Q ss_pred -CCCeEEcCCCCC--------------H--------------HHHHHHHhc--CCCeEeecCCCCHHHHHHHHHHcCCCC
Q 018508 135 -GTPAILRLPESC--------------P--------------TWAKKALDL--GPQGVMFPMIDSPEAAKEAVSYCRFPP 183 (355)
Q Consensus 135 -g~~~iVRV~~~~--------------~--------------~~i~~aLda--Ga~GImvP~Vesaeea~~vv~a~~~pP 183 (355)
....+||+|+.. + ..++.++.. |.++|++||+++++|++.+.+.+.+.+
T Consensus 331 g~~~l~VRiNGl~m~~~~il~~dG~~vp~~l~D~~~t~l~~~hDl~al~~sg~G~~yIvLPKmespeEV~~~~~lf~~~E 410 (731)
T 1p7t_A 331 GRSLLFIRNVGHLMTIPVIWDSEGNEIPEGILDGVMTGAIALYDLKVQKNSRTGSVYIVKPKMHGPQEVAFANKLFTRIE 410 (731)
T ss_dssp SSCEEEEECCCSSCEEEEEECTTSCEEEHHHHHHHHHHHHHHHHHHHCSSCSSSCEEEEECSCCSHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEcCCCccCcchhhccCCCCCcchhhhHHHHHHHHHhhHHHHhhCCCCCcEEEeCCCCCHHHHHHHHHHHHHHH
Confidence 245799999983 1 112333433 467999999999999998877654321
Q ss_pred CCCCCCcccccccccCCCCccccccCCCceEEEEEEccHHHHHHHHHHh--ccCCccEEEEChhhHHhhc-CCCC-----
Q 018508 184 SGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKRAEDIA--AVDGVDCVQMGPLDLSASM-GYLW----- 255 (355)
Q Consensus 184 ~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mIET~~av~nieeIa--avpgVD~l~iGp~DLs~sl-G~~~----- 255 (355)
. . .| -..+.+.+++||||+.|+.|++||+ +.++|.+|.+|..||+.++ +...
T Consensus 411 ~-~------------lG-------lp~gTIKi~vLIET~ra~~nl~EI~~aa~~Rv~gLn~G~~Dyt~d~I~t~~~~~~~ 470 (731)
T 1p7t_A 411 T-M------------LG-------MAPNTLKMGIMDEERRTSLNLRSCIAQARNRVAFINTGFLDRTGDEMHSVMEAGPM 470 (731)
T ss_dssp H-H------------TT-------CCTTCEEEEEEECSHHHHTTHHHHHHTTTTTEEEEEECHHHHHHHHHHHTGGGSCB
T ss_pred H-h------------hC-------CCCCceEEEEEECCHHHHHhHHHHHHhhccceEEEEcCHHHHhhhhhcccccCCcc
Confidence 0 0 01 1134689999999999999999996 4589999999999999995 5422
Q ss_pred -----CCCCHHHHHHHHH--HH--HHHHhCCCceee-cccCCch-------hHHHHHHCCCCE-EEecchHHHH
Q 018508 256 -----DPGHRKVREMMRV--AE--KGVLGGGKAYLA-GFAMPHD-------APLEMKSRGYHM-VSGAVDVGLF 311 (355)
Q Consensus 256 -----~~~~p~v~~ai~~--iv--~aa~a~g~~~~g-~~~~d~~-------~a~~~~~~G~~~-vs~~~D~~ll 311 (355)
....| +..+..+ +. .+|+++|+..+| +++.++. +..+-..+||+. .+.++...-+
T Consensus 471 vR~~~t~~~~-~~~AY~r~~V~~gLAcraaG~~aIgkGm~a~p~dmeg~~~dk~~~~~~GfdGkwViHP~qV~l 543 (731)
T 1p7t_A 471 LRKNQMKSTP-WIKAYERNNVLSGLFCGLRGKAQIGKGMWAMPDLMADMYSQKGDQLRAGANTAWVPSPTAATL 543 (731)
T ss_dssp CCGGGSTTCH-HHHHHHHHHHHHHHHTTCTTTSEEEECCCCCTTCHHHHHHHTHHHHHTTCSEEEESSHHHHHH
T ss_pred cccccccchH-HHHHHHHHhhhhHHHHHHcCCCCcccccccChhhHHHHHHHHHHHHhCCCCCcccCCHHHHHH
Confidence 12233 5555333 33 389999999999 9988763 344557999997 3444444433
No 24
>1e0t_A Pyruvate kinase, PK; phosphotransferase, glycolysis, allostery; 1.8A {Escherichia coli} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1pky_A 1e0u_A
Probab=99.56 E-value=1.5e-14 Score=146.60 Aligned_cols=136 Identities=14% Similarity=0.111 Sum_probs=106.7
Q ss_pred EcCCCCC---HHHHHHHHhcCCCeEeecCCCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEE
Q 018508 140 LRLPESC---PTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIM 216 (355)
Q Consensus 140 VRV~~~~---~~~i~~aLdaGa~GImvP~Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi 216 (355)
+.+|... ...++.+++.|+++|++|||++++|++++.+.++.. .+.++.++
T Consensus 165 ~~lp~ltekD~~Di~~~l~~gvD~I~lsfV~saeDv~~~~~~l~~~--------------------------~~~~i~Ii 218 (470)
T 1e0t_A 165 IALPALAEKDKQDLIFGCEQGVDFVAASFIRKRSDVIEIREHLKAH--------------------------GGENIHII 218 (470)
T ss_dssp CCCCSSCHHHHHHHHHHHHHTCSEEEESSCCSHHHHHHHHHHHHTT--------------------------TCTTCEEE
T ss_pred CCCCCCCcCCHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHHHHh--------------------------cCCCceEE
Confidence 3444444 346899999999999999999999999999987531 02358899
Q ss_pred EEEccHHHHHHHHHHhccCCccEEEEChhhHHhhcCCCCCCCCHHHHHHHHHHHHHHHhCCCceeec------ccCC--c
Q 018508 217 CQVESEEGVKRAEDIAAVDGVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVAEKGVLGGGKAYLAG------FAMP--H 288 (355)
Q Consensus 217 ~mIET~~av~nieeIaavpgVD~l~iGp~DLs~slG~~~~~~~p~v~~ai~~iv~aa~a~g~~~~g~------~~~d--~ 288 (355)
++|||++||+|++||+++ .|+|+||++||+.++|. +++..++++++.+|+++|++++.. +..+ |
T Consensus 219 akIEt~eav~nldeI~~~--sDgImVargDLgveig~------e~v~~~qk~ii~~araaGkpvI~ATQMLeSMi~~p~P 290 (470)
T 1e0t_A 219 SKIENQEGLNNFDEILEA--SDGIMVARGDLGVEIPV------EEVIFAQKMMIEKCIRARKVVITATMMLDSMIKNPRP 290 (470)
T ss_dssp EEECSHHHHHTHHHHHHH--SSEEEEEHHHHHHHSCH------HHHHHHHHHHHHHHHHHTCEEEEECC---------CC
T ss_pred EEECCHHHHHhHHHHHHH--CCEEEECchHhhhhcCH------HHHHHHHHHHHHHHHHcCCCEEEechhhHhhccCCCc
Confidence 999999999999999975 79999999999999985 679999999999999999875321 1111 2
Q ss_pred -----hhHHHHHHCCCCEEEecchHH
Q 018508 289 -----DAPLEMKSRGYHMVSGAVDVG 309 (355)
Q Consensus 289 -----~~a~~~~~~G~~~vs~~~D~~ 309 (355)
.++...+-.|.+.+.++.++.
T Consensus 291 TRAEvsDVanAV~dG~DavMLSgETA 316 (470)
T 1e0t_A 291 TDAEAGDVANAILDGTDAVMLSGESA 316 (470)
T ss_dssp CHHHHHHHHHHHHHTCSEEEECCC--
T ss_pred cHHHHhhhhHhhhcCccEEEeccccc
Confidence 234456678999999987765
No 25
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus}
Probab=99.56 E-value=1.6e-14 Score=150.09 Aligned_cols=135 Identities=15% Similarity=0.120 Sum_probs=108.6
Q ss_pred EcCCCCC---HHHHHHHHhcCCCeEeecCCCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCC-CceEE
Q 018508 140 LRLPESC---PTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYE-EELLI 215 (355)
Q Consensus 140 VRV~~~~---~~~i~~aLdaGa~GImvP~Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n-~~i~v 215 (355)
+.+|... ...|+++++.|+++|++|||++++|+++++++++.. + +++.+
T Consensus 166 ~~lp~ltekD~~di~~~l~~g~d~v~~sfV~~a~dv~~~~~~l~~~---------------------------~~~~~~i 218 (587)
T 2e28_A 166 VNLPGITEKDRADILFGIRQGIDFIAASFVRRASDVLEIRELLEAH---------------------------DALHIQI 218 (587)
T ss_dssp CCCCSCCHHHHHHHHHHHHHTCSEEEESSCCSHHHHHHHHHHHHHT---------------------------TCTTSEE
T ss_pred CCCCCCCcccHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHHHHc---------------------------CCCCceE
Confidence 3444443 456899999999999999999999999999987521 2 36899
Q ss_pred EEEEccHHHHHHHHHHhccCCccEEEEChhhHHhhcCCCCCCCCHHHHHHHHHHHHHHHhCCCceee-c-----ccCC--
Q 018508 216 MCQVESEEGVKRAEDIAAVDGVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVAEKGVLGGGKAYLA-G-----FAMP-- 287 (355)
Q Consensus 216 i~mIET~~av~nieeIaavpgVD~l~iGp~DLs~slG~~~~~~~p~v~~ai~~iv~aa~a~g~~~~g-~-----~~~d-- 287 (355)
+++|||++|++|+|||+++ .|+||+|++||+.++|. +++..++++++++|+++||+++- + +..+
T Consensus 219 iakIE~~eav~nldeIl~~--~DgImVargDLgvei~~------~~v~~~qk~ii~~~~~~gkpvi~ATQmLeSMi~~p~ 290 (587)
T 2e28_A 219 IAKIENEEGVANIDEILEA--ADGLMVARGDLGVEIPA------EEVPLIQKLLIKKSNMLGKPVITATQMLDSMQRNPR 290 (587)
T ss_dssp EEEECSHHHHHTHHHHHHH--SSEEEEEHHHHHHHSCG------GGHHHHHHHHHHHHHHHTCCEEEESSSSGGGGTCSS
T ss_pred EEEECCHHHHHhHHHHHHh--CCEEEEcCchhhhhcCH------HHHHHHHHHHHHHHHHcCCCeEEechhhHhhccCCC
Confidence 9999999999999999987 49999999999999985 67888889999999999987432 1 1112
Q ss_pred c-----hhHHHHHHCCCCEEEecchHH
Q 018508 288 H-----DAPLEMKSRGYHMVSGAVDVG 309 (355)
Q Consensus 288 ~-----~~a~~~~~~G~~~vs~~~D~~ 309 (355)
| .++...+-.|.+.+.++.++.
T Consensus 291 PTRAE~sDvanav~dG~DavMLSgETA 317 (587)
T 2e28_A 291 PTRAEASDVANAIFDGTDAVMLSGETA 317 (587)
T ss_dssp CCHHHHHHHHHHHHHTCSEEEESHHHH
T ss_pred ccHHHHhccchhhhhCcceeeeccccc
Confidence 2 234456678999999987774
No 26
>3gr4_A Pyruvate kinase isozymes M1/M2; activator, acetylation, allosteric enzyme, alternative splicing, glycolysis, magnesium, metal-binding; HET: FBP TLA DYY ADP; 1.60A {Homo sapiens} PDB: 3gqy_A* 3h6o_A* 3me3_A* 3srh_A 3srd_A 1zjh_A 4b2d_A* 4b2d_D* 3u2z_A* 3g2g_A 1t5a_A* 3bjt_A 4g1n_A* 3bjf_A* 3srf_C 1f3x_A 3n25_A 1f3w_A 1a49_A* 1a5u_A* ...
Probab=99.44 E-value=7.1e-13 Score=136.26 Aligned_cols=127 Identities=15% Similarity=0.126 Sum_probs=104.5
Q ss_pred HHHHHHHhcCCCeEeecCCCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEEccHHHHHH
Q 018508 148 TWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKR 227 (355)
Q Consensus 148 ~~i~~aLdaGa~GImvP~Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mIET~~av~n 227 (355)
..|+.+++.|+|.|.+|+|++++|++++.+.+... +.++.++++|||++||+|
T Consensus 246 ~dl~f~~~~~vD~ia~SfVr~a~Dv~~~r~~L~~~---------------------------g~~i~IIAKIE~~eav~n 298 (550)
T 3gr4_A 246 QDLKFGVEQDVDMVFASFIRKASDVHEVRKVLGEK---------------------------GKNIKIISKIENHEGVRR 298 (550)
T ss_dssp HHHHHHHHTTCSEEEETTCCSHHHHHHHHHHHTTT---------------------------TTTSEEEEEECSHHHHHT
T ss_pred HHHHHHHHcCCCEEEecCCCCHHHHHHHHHHHHhc---------------------------CCCceEEEEeCCHHHHHH
Confidence 35788999999999999999999999999987631 235889999999999999
Q ss_pred HHHHhccCCccEEEEChhhHHhhcCCCCCCCCHHHHHHHHHHHHHHHhCCCceee-c-----ccCC--ch-----hHHHH
Q 018508 228 AEDIAAVDGVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVAEKGVLGGGKAYLA-G-----FAMP--HD-----APLEM 294 (355)
Q Consensus 228 ieeIaavpgVD~l~iGp~DLs~slG~~~~~~~p~v~~ai~~iv~aa~a~g~~~~g-~-----~~~d--~~-----~a~~~ 294 (355)
++||+++ .|+|+||++||+.++|. +++..++++++.+|+++|++++- + +... |. ++...
T Consensus 299 ldeIl~~--sDgImVaRGDLgvei~~------e~vp~~Qk~iI~~c~~agkpVi~ATQMLeSMi~~p~PTRAEvsDVanA 370 (550)
T 3gr4_A 299 FDEILEA--SDGIMVARGDLGIEIPA------EKVFLAQKMMIGRCNRAGKPVICATQMLESMIKKPRPTRAEGSDVANA 370 (550)
T ss_dssp HHHHHHH--SSEEEEEHHHHHHHSCG------GGHHHHHHHHHHHHHHHTCCEEEESSTTGGGGTCSSCCHHHHHHHHHH
T ss_pred HHHHHHh--CCEEEEccchhcccCCH------HHHHHHHHHHHHHHHHhCCCEEEEehhhHHhhcCCCccHHHHHHHHHH
Confidence 9999985 79999999999999986 46888889999999999987431 1 1112 32 34566
Q ss_pred HHCCCCEEEecchHH
Q 018508 295 KSRGYHMVSGAVDVG 309 (355)
Q Consensus 295 ~~~G~~~vs~~~D~~ 309 (355)
+-.|.+.+.++.++.
T Consensus 371 vldG~DavMLSgETA 385 (550)
T 3gr4_A 371 VLDGADCIMLSGETA 385 (550)
T ss_dssp HHHTCSEEEESHHHH
T ss_pred HHcCCcEEEEecCcc
Confidence 778999999987774
No 27
>3hqn_D Pyruvate kinase, PK; TIM barrel, T-state enzyme, transferase, allosteric enzyme, binding, glycolysis, magnesium, metal-binding, NUCL binding; 2.00A {Leishmania mexicana} PDB: 1pkl_A 3hqo_K* 3hqp_A* 3hqq_A* 3is4_A* 3ktx_A* 3qv6_A* 3qv7_D* 3qv8_D* 3srk_A* 3e0w_A 3e0v_A 3pp7_A* 3qv9_A*
Probab=99.43 E-value=9.1e-13 Score=134.31 Aligned_cols=127 Identities=15% Similarity=0.177 Sum_probs=105.0
Q ss_pred HHHHHHHhcCCCeEeecCCCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEEccHHHHHH
Q 018508 148 TWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKR 227 (355)
Q Consensus 148 ~~i~~aLdaGa~GImvP~Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mIET~~av~n 227 (355)
..|..+++.|++.|.+|+|++++|++++.+.+.. .+.++.++++|||++||+|
T Consensus 196 ~dl~~~~~~~vD~i~~sfVr~a~dv~~~r~~l~~---------------------------~~~~i~IiaKIE~~eav~n 248 (499)
T 3hqn_D 196 VDLQFGVEQGVDMIFASFIRSAEQVGDVRKALGP---------------------------KGRDIMIICKIENHQGVQN 248 (499)
T ss_dssp HHHHHHHHTTCSEEEETTCCSHHHHHHHHHHHCG---------------------------GGTTSEEEEEECSHHHHHT
T ss_pred HHHHHHHHcCCCEEEecCCCCHHHHHHHHHHHHh---------------------------cCCCCeEEEEECCHHHHHh
Confidence 3578899999999999999999999999998852 1246889999999999999
Q ss_pred HHHHhccCCccEEEEChhhHHhhcCCCCCCCCHHHHHHHHHHHHHHHhCCCceeec------ccCC--ch-----hHHHH
Q 018508 228 AEDIAAVDGVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVAEKGVLGGGKAYLAG------FAMP--HD-----APLEM 294 (355)
Q Consensus 228 ieeIaavpgVD~l~iGp~DLs~slG~~~~~~~p~v~~ai~~iv~aa~a~g~~~~g~------~~~d--~~-----~a~~~ 294 (355)
++||+++ .|+|++|++||+.++|. +++..++++++.+|+++|++++.. +... |. ++...
T Consensus 249 ldeIl~~--sDgImVaRGDLgvEi~~------e~vp~~Qk~iI~~c~~agkpVi~ATQmLeSMi~~p~PTRAEvsDVana 320 (499)
T 3hqn_D 249 IDSIIEE--SDGIMVARGDLGVEIPA------EKVVVAQKILISKCNVAGKPVICATQMLESMTYNPRPTRAEVSDVANA 320 (499)
T ss_dssp HHHHHHH--SSEEEEEHHHHHHHSCH------HHHHHHHHHHHHHHHHHTCCEEEESSSSGGGGTSSSCCHHHHHHHHHH
T ss_pred HHHHHHh--CCcEEEccccccCcCCH------HHHHHHHHHHHHHHHHcCCCeEEeehhHHHhccCCCccHHHHHHHHHH
Confidence 9999985 79999999999999974 588999999999999999874321 1112 32 34566
Q ss_pred HHCCCCEEEecchHH
Q 018508 295 KSRGYHMVSGAVDVG 309 (355)
Q Consensus 295 ~~~G~~~vs~~~D~~ 309 (355)
+-.|.+.+.++.++.
T Consensus 321 V~dG~DavMLSgETA 335 (499)
T 3hqn_D 321 VFNGADCVMLSGETA 335 (499)
T ss_dssp HHHTCSEEEESHHHH
T ss_pred HHcCCcEEEEecccc
Confidence 789999999987764
No 28
>3qtg_A Pyruvate kinase, PK; TIM barrel, glycolysis, transferase; 2.20A {Pyrobaculum aerophilum}
Probab=99.40 E-value=1.8e-12 Score=130.90 Aligned_cols=135 Identities=13% Similarity=0.083 Sum_probs=107.6
Q ss_pred EcCCCCCH---HHHH--HHHhcCCCeEeecCCCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceE
Q 018508 140 LRLPESCP---TWAK--KALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELL 214 (355)
Q Consensus 140 VRV~~~~~---~~i~--~aLdaGa~GImvP~Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~ 214 (355)
+.+|.... ..++ .+++.|+++|.+|+|++++|++++.+.+... +.++.
T Consensus 174 ~~lp~lTekD~~dl~~~~~~~~~vD~Ia~SfVr~a~Dv~~~r~~l~~~---------------------------g~~~~ 226 (461)
T 3qtg_A 174 YDISTPAEEDVEALKAISPIRDNIDYVAISLAKSCKDVDSVRSLLTEL---------------------------GFQSQ 226 (461)
T ss_dssp CCCCSSCHHHHHHHHHHGGGGGGCCEEEECSCCSHHHHHHHHHHHHHT---------------------------TCCCE
T ss_pred CCCCCCCHHHHHHHHHHHHhhcCCCEEEecCCCCHHHHHHHHHHHHhc---------------------------CCCce
Confidence 34444443 3577 7899999999999999999999999877521 23588
Q ss_pred EEEEEccHHHHHHHHHHhccCCccEEEEChhhHHhhcCCCCCCCCHHHHHHHHHHHHHHHhCCCceeec------ccCC-
Q 018508 215 IMCQVESEEGVKRAEDIAAVDGVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVAEKGVLGGGKAYLAG------FAMP- 287 (355)
Q Consensus 215 vi~mIET~~av~nieeIaavpgVD~l~iGp~DLs~slG~~~~~~~p~v~~ai~~iv~aa~a~g~~~~g~------~~~d- 287 (355)
++++|||++||+|++||+++ .|+|++|++||+.++|. +++..++++++.+|+++|++++-. +...
T Consensus 227 iiaKIE~~eav~nldeIl~~--sDgImVaRGDLgvei~~------e~v~~~Qk~ii~~~~~~gkpvi~ATQMLeSMi~~p 298 (461)
T 3qtg_A 227 VAVKIETKGAVNNLEELVQC--SDYVVVARGDLGLHYGL------DALPIVQRRIVHTSLKYGKPIAVATQLLDSMQSSP 298 (461)
T ss_dssp EEEEECSHHHHHTHHHHHHT--CSEEEEEHHHHTTTSCT------TTHHHHHHHHHHHHHHTTCCEEEESSSSGGGGTCS
T ss_pred EEEEECCHHHHHhHHHHHHh--cccEEEccccccccCCH------HHHHHHHHHHHHHHHHhCCCEEEeccchHhhccCC
Confidence 99999999999999999985 79999999999999975 378889999999999999874321 1112
Q ss_pred -ch-----hHHHHHHCCCCEEEecchHH
Q 018508 288 -HD-----APLEMKSRGYHMVSGAVDVG 309 (355)
Q Consensus 288 -~~-----~a~~~~~~G~~~vs~~~D~~ 309 (355)
|. ++...+-.|.+.+.++.++.
T Consensus 299 ~PTRAEvsDVanAV~dGaDavMLSgETA 326 (461)
T 3qtg_A 299 IPTRAEINDVFTTASMGVDSLWLTNETA 326 (461)
T ss_dssp SCCHHHHHHHHHHHHTTCSEEEECHHHH
T ss_pred CccHHHHHHHHHHHHhCCcEEEEccccc
Confidence 32 34567889999999998775
No 29
>3khd_A Pyruvate kinase; malaria, structural genomics, structural GE consortium, SGC, transferase; 2.70A {Plasmodium falciparum 3D7}
Probab=99.34 E-value=4.7e-12 Score=129.44 Aligned_cols=126 Identities=15% Similarity=0.097 Sum_probs=103.1
Q ss_pred HH-HHHHhcCCCeEeecCCCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEEccHHHHHH
Q 018508 149 WA-KKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKR 227 (355)
Q Consensus 149 ~i-~~aLdaGa~GImvP~Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mIET~~av~n 227 (355)
.| ..+++.|+|.|.+|+|++++|++++.+.+... +.++.++++|||++||+|
T Consensus 221 dl~~f~~~~~vD~Ia~SFVr~a~Dv~~~r~~l~~~---------------------------g~~i~IIAKIE~~eav~n 273 (520)
T 3khd_A 221 DILNFAIPMGCNFIAASFIQSADDVRLIRNLLGPR---------------------------GRHIKIIPKIENIEGIIH 273 (520)
T ss_dssp HHHHTHHHHTCCEEEETTCCSHHHHHHHHHHHTTT---------------------------TTTSEEEEEECSHHHHHT
T ss_pred HHHHHHHHcCCCEEEECCCCCHHHHHHHHHHHHhc---------------------------CCCCcEEEEECCHHHHHh
Confidence 46 78899999999999999999999999988631 235789999999999999
Q ss_pred HHHHhccCCccEEEEChhhHHhhcCCCCCCCCHHHHHHHHHHHHHHHhCCCceeec------ccCC--ch-----hHHHH
Q 018508 228 AEDIAAVDGVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVAEKGVLGGGKAYLAG------FAMP--HD-----APLEM 294 (355)
Q Consensus 228 ieeIaavpgVD~l~iGp~DLs~slG~~~~~~~p~v~~ai~~iv~aa~a~g~~~~g~------~~~d--~~-----~a~~~ 294 (355)
++||+++ .|+|+||++||+.++|. +++..++++++.+|+++|++++-. +... |. ++...
T Consensus 274 ldeIl~~--sDGIMVARGDLgvEi~~------e~vp~~Qk~iI~~c~~aGKPVi~ATQMLeSMi~~p~PTRAEvsDVanA 345 (520)
T 3khd_A 274 FDKILAE--SDGIMIARGDLGMEISP------EKVFLAQKLMISKCNLQGKPIITATQMLESMTKNPRPTRAEVTDVANA 345 (520)
T ss_dssp HHHHHHH--SSCEEECHHHHTTTSCG------GGHHHHHHHHHHHHHHHTCCEEECCCCCGGGGTCSSCCHHHHHHHHHH
T ss_pred HHHHHHh--CCcEEEccccccccCCH------HHHHHHHHHHHHHHHHcCCCeEEeehhhHHHhcCCCccHHHHHHHHHH
Confidence 9999975 59999999999999875 378888999999999999874311 1112 32 34566
Q ss_pred HHCCCCEEEecchHH
Q 018508 295 KSRGYHMVSGAVDVG 309 (355)
Q Consensus 295 ~~~G~~~vs~~~D~~ 309 (355)
+-.|.+.+.++.++.
T Consensus 346 VldGaDavMLSgETA 360 (520)
T 3khd_A 346 VLDGTDCVMLSGETA 360 (520)
T ss_dssp HHHTCSEEEESHHHH
T ss_pred HHhCCCEEEeccccc
Confidence 778999999987764
No 30
>3gg8_A Pyruvate kinase; malaria, genomics, proteomics, glycolysis, magnesium, transferase, structural genomics, STRU genomics consortium, SGC; 2.21A {Toxoplasma gondii} PDB: 3eoe_A
Probab=99.28 E-value=1.8e-11 Score=125.08 Aligned_cols=126 Identities=13% Similarity=0.081 Sum_probs=103.3
Q ss_pred HH-HHHHhcCCCeEeecCCCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEEccHHHHHH
Q 018508 149 WA-KKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKR 227 (355)
Q Consensus 149 ~i-~~aLdaGa~GImvP~Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mIET~~av~n 227 (355)
.| ..+++.|+|.|.+|+|++++|++++.+.+... +.++.++++|||++||+|
T Consensus 212 Dl~~f~~~~~vD~Ia~SFVr~a~Dv~~~r~~l~~~---------------------------~~~~~iiaKIE~~eav~n 264 (511)
T 3gg8_A 212 DILNFGIPMGCNFIAASFVQSADDVRYIRGLLGPR---------------------------GRHIRIIPKIENVEGLVN 264 (511)
T ss_dssp HHHHTTTTTTCCEEEETTCCSHHHHHHHHHHHTGG---------------------------GTTCEEEEEECSHHHHHT
T ss_pred HHHHHHHHcCCCEEEEcCCCCHHHHHHHHHHHHhc---------------------------CCCCeEEEEECCHHHHHh
Confidence 46 77888999999999999999999999987521 235789999999999999
Q ss_pred HHHHhccCCccEEEEChhhHHhhcCCCCCCCCHHHHHHHHHHHHHHHhCCCceeec------ccCC--ch-----hHHHH
Q 018508 228 AEDIAAVDGVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVAEKGVLGGGKAYLAG------FAMP--HD-----APLEM 294 (355)
Q Consensus 228 ieeIaavpgVD~l~iGp~DLs~slG~~~~~~~p~v~~ai~~iv~aa~a~g~~~~g~------~~~d--~~-----~a~~~ 294 (355)
++||++. .|+|++|++||+.++|. +++..++++++.+|+++|++++-. +... |. ++...
T Consensus 265 ldeIl~~--sDgimVaRGDLgvei~~------e~v~~~qk~ii~~~~~~gkpvi~ATQmLeSMi~~p~PTRAEvsDVAnA 336 (511)
T 3gg8_A 265 FDEILAE--ADGIMIARGDLGMEIPP------EKVFLAQKMMIAKCNVVGKPVITATQMLESMIKNPRPTRAEAADVANA 336 (511)
T ss_dssp HHHHHHH--CSCEEEEHHHHHHHSCH------HHHHHHHHHHHHHHHHTTCCEEEESSSSGGGGTCSSCCHHHHHHHHHH
T ss_pred HHHHHHh--CCeEEEecchhcCcCCH------HHHHHHHHHHHHHHHHcCCCeEEehHHHHHhhcCCCccHHHHHHHHHH
Confidence 9999975 59999999999999974 589999999999999999874321 1112 22 34567
Q ss_pred HHCCCCEEEecchHH
Q 018508 295 KSRGYHMVSGAVDVG 309 (355)
Q Consensus 295 ~~~G~~~vs~~~D~~ 309 (355)
+-.|.+.+.++.++.
T Consensus 337 V~dGaDavMLSgETA 351 (511)
T 3gg8_A 337 VLDGTDCVMLSGETA 351 (511)
T ss_dssp HHHTCSEEEESHHHH
T ss_pred HHhCCCEEEeccccc
Confidence 788999999987774
No 31
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A*
Probab=99.27 E-value=1.7e-11 Score=127.64 Aligned_cols=127 Identities=13% Similarity=0.105 Sum_probs=104.3
Q ss_pred HHHHHHHhcCCCeEeecCCCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEEccHHHHHH
Q 018508 148 TWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKR 227 (355)
Q Consensus 148 ~~i~~aLdaGa~GImvP~Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mIET~~av~n 227 (355)
..|+.+++.|+|.|.+++|++++|++++.+.+.. .+.++.++++|||++||+|
T Consensus 197 ~dl~f~~~~~vD~Ia~SFVr~a~Dv~~~r~~l~~---------------------------~~~~i~IiaKIE~~eav~n 249 (606)
T 3t05_A 197 EDIRFGIKENVDFIAASFVRRPSDVLEIREILEE---------------------------QKANISVFPKIENQEGIDN 249 (606)
T ss_dssp HHHHHHHHTTCSEEEETTCCSHHHHHHHHHHHHH---------------------------TTCCCEEEECCCSHHHHHT
T ss_pred HHHHHHHHcCCCEEEECCCCCHHHHHHHHHHHHh---------------------------cCCCCeEEEEeCCHHHHHh
Confidence 4578899999999999999999999999987752 1346899999999999999
Q ss_pred HHHHhccCCccEEEEChhhHHhhcCCCCCCCCHHHHHHHHHHHHHHHhCCCceeec------ccCC--ch-----hHHHH
Q 018508 228 AEDIAAVDGVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVAEKGVLGGGKAYLAG------FAMP--HD-----APLEM 294 (355)
Q Consensus 228 ieeIaavpgVD~l~iGp~DLs~slG~~~~~~~p~v~~ai~~iv~aa~a~g~~~~g~------~~~d--~~-----~a~~~ 294 (355)
++||+++ .|+|++|++||+.++|. +++..++++++.+|+++||+++-. +..+ |. ++...
T Consensus 250 ldeIl~~--sDGImVARGDLgvei~~------e~vp~~Qk~ii~~~~~~gkpvi~ATQMLeSMi~~p~PTRAEvsDVanA 321 (606)
T 3t05_A 250 IEEILEV--SDGLMVARGDMGVEIPP------EKVPMVQKDLIRQCNKLGKPVITATQMLDSMQRNPRATRAEASDVANA 321 (606)
T ss_dssp HHHHHHH--CSCEEEEHHHHHHHSCG------GGHHHHHHHHHHHHHHHTCCEEEESSSSGGGTTCSSCCHHHHHHHHHH
T ss_pred HHHHHHh--CCEEEEccccccCcCCH------HHHHHHHHHHHHHHHHcCCCeEEehHHHHHhhcCCCccHHHHHHHHHH
Confidence 9999985 89999999999999985 478888999999999999875321 1112 22 34566
Q ss_pred HHCCCCEEEecchHH
Q 018508 295 KSRGYHMVSGAVDVG 309 (355)
Q Consensus 295 ~~~G~~~vs~~~D~~ 309 (355)
+-.|.+.+.++.++.
T Consensus 322 v~dGaDavMLSgETA 336 (606)
T 3t05_A 322 IYDGTDAVMLSGETA 336 (606)
T ss_dssp HHHTCSEEEECHHHH
T ss_pred HHcCCCEEEeccccc
Confidence 778999999987663
No 32
>4drs_A Pyruvate kinase; glycolysis, allosteric EN transferase; 2.50A {Cryptosporidium parvum} PDB: 3ma8_A*
Probab=98.70 E-value=1e-07 Score=97.80 Aligned_cols=132 Identities=12% Similarity=0.075 Sum_probs=101.8
Q ss_pred HHHHHhcCCCeEeecCCCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEEccHHHHHHHH
Q 018508 150 AKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKRAE 229 (355)
Q Consensus 150 i~~aLdaGa~GImvP~Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mIET~~av~nie 229 (355)
+..+++.|+|.|-+.+|+++++++++.+.+... |....+ ...++.+++-||+++|++|++
T Consensus 222 l~fa~~~~vD~ialSFVr~~~Dv~~~r~~l~~~--g~~~~~------------------~~~~i~IiaKIE~~~av~Nld 281 (526)
T 4drs_A 222 VDFALKYNLDFIALSFVQNGADVQLCRQIISEN--TQYSNG------------------IPSSIKIISKIENLEGVINFD 281 (526)
T ss_dssp HHTTTTTTCSEEEETTCCSHHHHHHHHHHHHTC--CTTTTT------------------CCCCCEEEEEECSHHHHHTHH
T ss_pred HHHHHHhccCeeeecccCchhhHHHHHHHHHhh--Cccccc------------------ccccceeeeehhccHHHHHHH
Confidence 345677889999999999999999999988642 211111 124688999999999999999
Q ss_pred HHhccCCccEEEEChhhHHhhcCCCCCCCCHHHHHHHHHHHHHHHhCCCceee-c-----ccCC--c-----hhHHHHHH
Q 018508 230 DIAAVDGVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVAEKGVLGGGKAYLA-G-----FAMP--H-----DAPLEMKS 296 (355)
Q Consensus 230 eIaavpgVD~l~iGp~DLs~slG~~~~~~~p~v~~ai~~iv~aa~a~g~~~~g-~-----~~~d--~-----~~a~~~~~ 296 (355)
||... -|+|++..+||...++. +++..+.++++..|+++||+++- + +... | .++...+-
T Consensus 282 eIi~~--sDgIMVARGDLgvEip~------e~vp~~QK~II~~c~~~gKPVI~ATQmLeSMi~np~PTRAEvsDVAnAV~ 353 (526)
T 4drs_A 282 SICSE--SDGIMVARGDLGMEIPP------EKIFVAQKCMISKCNVAGKPVVTATQMLESMIKSNRPTRAEMTDVANAVL 353 (526)
T ss_dssp HHHHH--SSEEEEECTTHHHHSCG------GGHHHHHHHHHHHHHHHTCCEEEESCTTGGGGSSSSCCHHHHHHHHHHHH
T ss_pred HHHhh--ccEEEEECCcccccCCH------HHHHHHHHHHHHHHHHcCCeEEEhhhhhHHHhhCCCCCCchHHHHHHHHH
Confidence 99973 69999999999999986 36777889999999999998532 1 1111 2 23456677
Q ss_pred CCCCEEEecchHH
Q 018508 297 RGYHMVSGAVDVG 309 (355)
Q Consensus 297 ~G~~~vs~~~D~~ 309 (355)
.|.+.+.++.++.
T Consensus 354 DGaDavMLSgETA 366 (526)
T 4drs_A 354 DGSDCVMLSGETA 366 (526)
T ss_dssp HTCSEEEESHHHH
T ss_pred hCCceEEEcchhh
Confidence 8999999997764
No 33
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=98.10 E-value=5e-05 Score=70.61 Aligned_cols=195 Identities=15% Similarity=0.177 Sum_probs=110.3
Q ss_pred HHHHHHcCCcEEEEEEecCCH--H----HHHHhhhcCCcEEEEeCCC------CC-------------CCHHHHHHHHHH
Q 018508 76 LKYRLQSNETLYGLFLLSFSP--T----LAEISGLAGYDFVVVDMEH------GP-------------GGISDALACLHA 130 (355)
Q Consensus 76 lk~~L~~G~~~~gl~v~~~sp--~----~~e~aa~~G~D~vilDlEh------~~-------------~~~~~a~~~i~a 130 (355)
|++.-++|+..+..|+..++| + .++.+...|+|+|-++.-. ++ .+.+.....+++
T Consensus 9 ~~~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ 88 (262)
T 1rd5_A 9 MAALMAKGKTAFIPYITAGDPDLATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLRE 88 (262)
T ss_dssp HHHHHHTTCCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHH
T ss_pred HHHHHhcCCceEEEEeeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 333334688888888877766 2 4566678899999999533 22 123334455666
Q ss_pred HHh-CCCCeEE--cCCCCCHHHHHHHHhcCCCeEeecCCCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccc
Q 018508 131 LAA-TGTPAIL--RLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLS 207 (355)
Q Consensus 131 ~~~-~g~~~iV--RV~~~~~~~i~~aLdaGa~GImvP~Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~ 207 (355)
++. ...++++ +.|......+.++.++|++||++|-.. .++++.+++.++.. | .
T Consensus 89 ir~~~~~Pv~~m~~~~~~~~~~~~~a~~aGadgv~v~d~~-~~~~~~~~~~~~~~--g---~------------------ 144 (262)
T 1rd5_A 89 VTPELSCPVVLLSYYKPIMFRSLAKMKEAGVHGLIVPDLP-YVAAHSLWSEAKNN--N---L------------------ 144 (262)
T ss_dssp HGGGCSSCEEEECCSHHHHSCCTHHHHHTTCCEEECTTCB-TTTHHHHHHHHHHT--T---C------------------
T ss_pred HHhcCCCCEEEEecCcHHHHHHHHHHHHcCCCEEEEcCCC-hhhHHHHHHHHHHc--C---C------------------
Confidence 653 3455544 333110012455899999999998643 35677777766521 1 0
Q ss_pred cCCCceEEEEEEccHHHHHHHHHHhccCCccEEEEChhhHHhhcCCCCC--CCCHHHHHHHHHHHHHHHhCCCceeeccc
Q 018508 208 NYEEELLIMCQVESEEGVKRAEDIAAVDGVDCVQMGPLDLSASMGYLWD--PGHRKVREMMRVAEKGVLGGGKAYLAGFA 285 (355)
Q Consensus 208 ~~n~~i~vi~mIET~~av~nieeIaavpgVD~l~iGp~DLs~slG~~~~--~~~p~v~~ai~~iv~aa~a~g~~~~g~~~ 285 (355)
...+.+...|+ .+.++++++. +.+++++++ ..|+.++ ...+...+.+.++.+. ...+++.+..
T Consensus 145 ----~~i~~~a~~t~--~e~~~~~~~~-~~g~v~~~s-----~~G~tG~~~~~~~~~~~~i~~v~~~---~~~pI~vgGG 209 (262)
T 1rd5_A 145 ----ELVLLTTPAIP--EDRMKEITKA-SEGFVYLVS-----VNGVTGPRANVNPRVESLIQEVKKV---TNKPVAVGFG 209 (262)
T ss_dssp ----EECEEECTTSC--HHHHHHHHHH-CCSCEEEEC-----SSCCBCTTSCBCTHHHHHHHHHHHH---CSSCEEEESC
T ss_pred ----ceEEEECCCCC--HHHHHHHHhc-CCCeEEEec-----CCCCCCCCcCCCchHHHHHHHHHhh---cCCeEEEECC
Confidence 11122222232 3455555542 124666665 1344333 2234455555554432 2455444444
Q ss_pred CC-chhHHHHHHCCCCEEEecchHH
Q 018508 286 MP-HDAPLEMKSRGYHMVSGAVDVG 309 (355)
Q Consensus 286 ~d-~~~a~~~~~~G~~~vs~~~D~~ 309 (355)
-+ ++.+..+++.|.+.+.+|+-..
T Consensus 210 I~~~e~~~~~~~~GAdgvvVGSai~ 234 (262)
T 1rd5_A 210 ISKPEHVKQIAQWGADGVIIGSAMV 234 (262)
T ss_dssp CCSHHHHHHHHHTTCSEEEECHHHH
T ss_pred cCCHHHHHHHHHcCCCEEEEChHHH
Confidence 44 8889999999999999997653
No 34
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=97.81 E-value=0.0017 Score=60.60 Aligned_cols=187 Identities=17% Similarity=0.161 Sum_probs=103.6
Q ss_pred cCCcEEEEEEecCCHH------HHHHhhhcCCcEEEEeCCCC-CC-C---H--------------HHHHHHHHHHHhC--
Q 018508 82 SNETLYGLFLLSFSPT------LAEISGLAGYDFVVVDMEHG-PG-G---I--------------SDALACLHALAAT-- 134 (355)
Q Consensus 82 ~G~~~~gl~v~~~sp~------~~e~aa~~G~D~vilDlEh~-~~-~---~--------------~~a~~~i~a~~~~-- 134 (355)
+|+..+-.|+...+|. .++.+...|+|.|-|+.-.+ |. + . +...++++.++..
T Consensus 14 ~~~~~~i~~i~~g~p~~~~~~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~ 93 (262)
T 2ekc_A 14 KREKALVSYLMVGYPDYETSLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFP 93 (262)
T ss_dssp HTBCEEEEEEETTSSCHHHHHHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCT
T ss_pred cCCceEEEEecCCCCChHHHHHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcC
Confidence 4777776676665553 56677789999999998665 21 1 1 1122335555432
Q ss_pred CCCeEEcCCCCCH-------HHHHHHHhcCCCeEeecCCCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccc
Q 018508 135 GTPAILRLPESCP-------TWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLS 207 (355)
Q Consensus 135 g~~~iVRV~~~~~-------~~i~~aLdaGa~GImvP~Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~ 207 (355)
..++++ ..-.++ ..++.+.++|++||++|-+. .+++..+++.++.. |
T Consensus 94 ~~Pi~~-m~y~n~v~~~g~~~f~~~~~~aG~dgvii~dl~-~ee~~~~~~~~~~~--g---------------------- 147 (262)
T 2ekc_A 94 DIPFLL-MTYYNPIFRIGLEKFCRLSREKGIDGFIVPDLP-PEEAEELKAVMKKY--V---------------------- 147 (262)
T ss_dssp TSCEEE-ECCHHHHHHHCHHHHHHHHHHTTCCEEECTTCC-HHHHHHHHHHHHHT--T----------------------
T ss_pred CCCEEE-EecCcHHHHhhHHHHHHHHHHcCCCEEEECCCC-HHHHHHHHHHHHHc--C----------------------
Confidence 455544 211111 34577889999999999764 57888888877531 1
Q ss_pred cCCCceEEEEEEccHHHHHHHHHHhcc-CCccEEEE-ChhhHHhhcCCCCCCCC-HHHHHHHHHHHHHHHhCCCceeecc
Q 018508 208 NYEEELLIMCQVESEEGVKRAEDIAAV-DGVDCVQM-GPLDLSASMGYLWDPGH-RKVREMMRVAEKGVLGGGKAYLAGF 284 (355)
Q Consensus 208 ~~n~~i~vi~mIET~~av~nieeIaav-pgVD~l~i-Gp~DLs~slG~~~~~~~-p~v~~ai~~iv~aa~a~g~~~~g~~ 284 (355)
+.++.++.-....+.+.+|++. .+ +++. +..+.+ |.. .+.. +.+.+.++++.+. .+.+++.++
T Consensus 148 -----l~~i~l~~p~t~~~rl~~ia~~a~g--fiy~vs~~g~T---G~~-~~~~~~~~~~~v~~vr~~---~~~pv~vG~ 213 (262)
T 2ekc_A 148 -----LSFVPLGAPTSTRKRIKLICEAADE--MTYFVSVTGTT---GAR-EKLPYERIKKKVEEYREL---CDKPVVVGF 213 (262)
T ss_dssp -----CEECCEECTTCCHHHHHHHHHHCSS--CEEEESSCC-------------CHHHHHHHHHHHHH---CCSCEEEES
T ss_pred -----CcEEEEeCCCCCHHHHHHHHHhCCC--CEEEEecCCcc---CCC-CCcCcccHHHHHHHHHhh---cCCCEEEeC
Confidence 1223333222233577777753 33 2332 332222 111 1122 4444555544332 244554445
Q ss_pred cC-CchhHHHHHHCCCCEEEecchHH
Q 018508 285 AM-PHDAPLEMKSRGYHMVSGAVDVG 309 (355)
Q Consensus 285 ~~-d~~~a~~~~~~G~~~vs~~~D~~ 309 (355)
.. +++.+.. +..|.+.+.+|+-+.
T Consensus 214 GI~t~e~~~~-~~~gADgvIVGSai~ 238 (262)
T 2ekc_A 214 GVSKKEHARE-IGSFADGVVVGSALV 238 (262)
T ss_dssp SCCSHHHHHH-HHTTSSEEEECHHHH
T ss_pred CCCCHHHHHH-HHcCCCEEEECHHHH
Confidence 44 4788887 678999999997664
No 35
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=97.68 E-value=0.00062 Score=63.76 Aligned_cols=189 Identities=11% Similarity=0.074 Sum_probs=107.0
Q ss_pred HcCCcEEEEEEecCCH--H----HHHHhhhcCCcEEEEeCCCC------CCCH-------------HHHHHHHHHHHhC-
Q 018508 81 QSNETLYGLFLLSFSP--T----LAEISGLAGYDFVVVDMEHG------PGGI-------------SDALACLHALAAT- 134 (355)
Q Consensus 81 ~~G~~~~gl~v~~~sp--~----~~e~aa~~G~D~vilDlEh~------~~~~-------------~~a~~~i~a~~~~- 134 (355)
++|+..+.-++...+| . .++.+...|+|+|-+|.-.+ +.-. ....+.++.++..
T Consensus 13 ~~~~~~~i~~i~~gdp~~~~~~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~ 92 (268)
T 1qop_A 13 DRREGAFVPFVTLGDPGIEQSLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKH 92 (268)
T ss_dssp HTTCCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHC
T ss_pred hcCCceEEEEeeCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcC
Confidence 3578877777777666 3 45566778999999999444 2111 1112345555433
Q ss_pred -CCCeEE--cCCCC---C-HHHHHHHHhcCCCeEeecCCCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccc
Q 018508 135 -GTPAIL--RLPES---C-PTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLS 207 (355)
Q Consensus 135 -g~~~iV--RV~~~---~-~~~i~~aLdaGa~GImvP~Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~ 207 (355)
..++++ -.|.. . ...+..+.++|++||++|-.. .+++..+++.++.. |
T Consensus 93 ~~~Pv~lm~y~n~v~~~g~~~~~~~~~~aGadgii~~d~~-~e~~~~~~~~~~~~--g---------------------- 147 (268)
T 1qop_A 93 PTIPIGLLMYANLVFNNGIDAFYARCEQVGVDSVLVADVP-VEESAPFRQAALRH--N---------------------- 147 (268)
T ss_dssp SSSCEEEEECHHHHHTTCHHHHHHHHHHHTCCEEEETTCC-GGGCHHHHHHHHHT--T----------------------
T ss_pred CCCCEEEEEcccHHHHhhHHHHHHHHHHcCCCEEEEcCCC-HHHHHHHHHHHHHc--C----------------------
Confidence 455433 22311 1 245788999999999999765 46777777777531 1
Q ss_pred cCCCceEEEEEEccHHHHHHHHHHhcc-CCccEEEEChhhHHhhcCCCCC--CCCHHHHHHHHHHHHHHHhCCCceeecc
Q 018508 208 NYEEELLIMCQVESEEGVKRAEDIAAV-DGVDCVQMGPLDLSASMGYLWD--PGHRKVREMMRVAEKGVLGGGKAYLAGF 284 (355)
Q Consensus 208 ~~n~~i~vi~mIET~~av~nieeIaav-pgVD~l~iGp~DLs~slG~~~~--~~~p~v~~ai~~iv~aa~a~g~~~~g~~ 284 (355)
+.++..+.-..-.+.+++|++. ++ ++++..- .|..|+ ...+.+.+.++++.+.. +.+++.+.
T Consensus 148 -----~~~i~l~~p~t~~~~i~~i~~~~~g--~v~~~s~-----~G~tG~~~~~~~~~~~~i~~lr~~~---~~pi~vgg 212 (268)
T 1qop_A 148 -----IAPIFICPPNADDDLLRQVASYGRG--YTYLLSR-----SGVTGAENRGALPLHHLIEKLKEYH---AAPALQGF 212 (268)
T ss_dssp -----CEEECEECTTCCHHHHHHHHHHCCS--CEEEESS-----SSCCCSSSCC--CCHHHHHHHHHTT---CCCEEEES
T ss_pred -----CcEEEEECCCCCHHHHHHHHhhCCC--cEEEEec-----CCcCCCccCCCchHHHHHHHHHhcc---CCcEEEEC
Confidence 1223333221234566777753 33 3333211 144443 22233344444443222 44544444
Q ss_pred cCC-chhHHHHHHCCCCEEEecchHH
Q 018508 285 AMP-HDAPLEMKSRGYHMVSGAVDVG 309 (355)
Q Consensus 285 ~~d-~~~a~~~~~~G~~~vs~~~D~~ 309 (355)
.-. ++.+...+..|.+.+.+|+-+.
T Consensus 213 GI~t~e~~~~~~~agAD~vVVGSai~ 238 (268)
T 1qop_A 213 GISSPEQVSAAVRAGAAGAISGSAIV 238 (268)
T ss_dssp SCCSHHHHHHHHHTTCSEEEECHHHH
T ss_pred CCCCHHHHHHHHHcCCCEEEEChHHh
Confidence 444 8889888899999999998764
No 36
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=97.57 E-value=0.0011 Score=60.60 Aligned_cols=186 Identities=13% Similarity=0.118 Sum_probs=104.1
Q ss_pred cCCcEEEEEEecCCH---H---HHHHhhhcCCcEEEEe------CCCCCC-------------CHHHHHHHHHHHHh-CC
Q 018508 82 SNETLYGLFLLSFSP---T---LAEISGLAGYDFVVVD------MEHGPG-------------GISDALACLHALAA-TG 135 (355)
Q Consensus 82 ~G~~~~gl~v~~~sp---~---~~e~aa~~G~D~vilD------lEh~~~-------------~~~~a~~~i~a~~~-~g 135 (355)
+|++.+..++...+| . .++.+... +|+|-+| .-|++. +.....+.++.++. ..
T Consensus 2 ~~~~~~~~~i~~~~~~~~~~~~~a~~~~~~-ad~iel~~p~sdp~~DG~~~~~~~~~al~~g~~~~~~~~~i~~i~~~~~ 80 (248)
T 1geq_A 2 FKDGSLIPYLTAGDPDKQSTLNFLLALDEY-AGAIELGIPFSDPIADGKTIQESHYRALKNGFKLREAFWIVKEFRRHSS 80 (248)
T ss_dssp CCTTEEEEEEETTSSCHHHHHHHHHHHGGG-BSCEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTCC
T ss_pred CCCccEEEEEeCCCCCHHHHHHHHHHHHHc-CCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHhhCC
Confidence 366777778887777 2 34555667 9999999 666643 33334556666653 23
Q ss_pred CCeE--EcCCCC---C-HHHHHHHHhcCCCeEeecCCCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccC
Q 018508 136 TPAI--LRLPES---C-PTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNY 209 (355)
Q Consensus 136 ~~~i--VRV~~~---~-~~~i~~aLdaGa~GImvP~Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~ 209 (355)
.++. +.+|.. . ...+..++++|+++|++|-. ..++.+.+.+.++.. |
T Consensus 81 ~pv~~~~~~~~~~~~~~~~~~~~~~~~Gad~v~~~~~-~~~~~~~~~~~~~~~--g------------------------ 133 (248)
T 1geq_A 81 TPIVLMTYYNPIYRAGVRNFLAEAKASGVDGILVVDL-PVFHAKEFTEIAREE--G------------------------ 133 (248)
T ss_dssp CCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTC-CGGGHHHHHHHHHHH--T------------------------
T ss_pred CCEEEEeccchhhhcCHHHHHHHHHHCCCCEEEECCC-ChhhHHHHHHHHHHh--C------------------------
Confidence 4433 322210 0 24678899999999999854 456777777776521 1
Q ss_pred CCceEEEEEEccHHHHHHHHHHhccCCcc-EEEEChhhHHhhcCCCCCC--CCHHHHHHHHHHHHHHHhCCCceeecccC
Q 018508 210 EEELLIMCQVESEEGVKRAEDIAAVDGVD-CVQMGPLDLSASMGYLWDP--GHRKVREMMRVAEKGVLGGGKAYLAGFAM 286 (355)
Q Consensus 210 n~~i~vi~mIET~~av~nieeIaavpgVD-~l~iGp~DLs~slG~~~~~--~~p~v~~ai~~iv~aa~a~g~~~~g~~~~ 286 (355)
..+++.+....-.+.+.++.. ++| .+++++-+ |..++. ..|...+.++++.+.. +.+++.+-.-
T Consensus 134 ---~~~~~~i~~~t~~e~~~~~~~--~~d~~i~~~~~~-----G~~g~~~~~~~~~~~~i~~l~~~~---~~pi~~~GGI 200 (248)
T 1geq_A 134 ---IKTVFLAAPNTPDERLKVIDD--MTTGFVYLVSLY-----GTTGAREEIPKTAYDLLRRAKRIC---RNKVAVGFGV 200 (248)
T ss_dssp ---CEEEEEECTTCCHHHHHHHHH--HCSSEEEEECCC------------CCCHHHHHHHHHHHHHC---SSCEEEESCC
T ss_pred ---CCeEEEECCCCHHHHHHHHHh--cCCCeEEEEECC-----ccCCCCCCCChhHHHHHHHHHhhc---CCCEEEEeec
Confidence 123334432122344445543 244 55554321 211211 2355555565554432 4454332223
Q ss_pred -CchhHHHHHHCCCCEEEecchH
Q 018508 287 -PHDAPLEMKSRGYHMVSGAVDV 308 (355)
Q Consensus 287 -d~~~a~~~~~~G~~~vs~~~D~ 308 (355)
+++.+..+++.|++.+.+|+-.
T Consensus 201 ~~~e~i~~~~~~Gad~vivGsai 223 (248)
T 1geq_A 201 SKREHVVSLLKEGANGVVVGSAL 223 (248)
T ss_dssp CSHHHHHHHHHTTCSEEEECHHH
T ss_pred CCHHHHHHHHHcCCCEEEEcHHH
Confidence 3488888889999999999654
No 37
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=97.44 E-value=0.0003 Score=65.65 Aligned_cols=185 Identities=11% Similarity=0.093 Sum_probs=112.5
Q ss_pred HHHHHhhhcCCcEEEEeCCCCCC------CHHHHHHHHHHHHhC-CCCeEE--cCCCCCHHHHHHHHhcCCCeEeecCCC
Q 018508 97 TLAEISGLAGYDFVVVDMEHGPG------GISDALACLHALAAT-GTPAIL--RLPESCPTWAKKALDLGPQGVMFPMID 167 (355)
Q Consensus 97 ~~~e~aa~~G~D~vilDlEh~~~------~~~~a~~~i~a~~~~-g~~~iV--RV~~~~~~~i~~aLdaGa~GImvP~Ve 167 (355)
+.++.+...|+||+-+|.-|+.+ ..+. ...++.. . ..+.-| -|+.++ .++..+.++||+.|.|.. +
T Consensus 44 ~~i~~l~~~G~d~lHvDVmDg~FVpnit~G~~~-v~~lr~~--~p~~~ldvHLmv~~p~-~~i~~~~~aGAd~itvH~-E 118 (246)
T 3inp_A 44 DDVKAVLAAGADNIHFDVMDNHYVPNLTFGPMV-LKALRDY--GITAGMDVHLMVKPVD-ALIESFAKAGATSIVFHP-E 118 (246)
T ss_dssp HHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHH-HHHHHHH--TCCSCEEEEEECSSCH-HHHHHHHHHTCSEEEECG-G
T ss_pred HHHHHHHHcCCCEEEEEecCCCcCcchhcCHHH-HHHHHHh--CCCCeEEEEEeeCCHH-HHHHHHHHcCCCEEEEcc-c
Confidence 34577778899999999999843 3322 2223322 2 233222 244443 368889999999999975 4
Q ss_pred CHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEEccHHHHHHHHHHhccCCccEEEEChhhH
Q 018508 168 SPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKRAEDIAAVDGVDCVQMGPLDL 247 (355)
Q Consensus 168 saeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mIET~~av~nieeIaavpgVD~l~iGp~DL 247 (355)
..+++.+.++.++.. | ..+++.|-...-++.+++++. .+|.|.+.+-
T Consensus 119 a~~~~~~~i~~ir~~--G---------------------------~k~Gvalnp~Tp~e~l~~~l~--~vD~VlvMsV-- 165 (246)
T 3inp_A 119 ASEHIDRSLQLIKSF--G---------------------------IQAGLALNPATGIDCLKYVES--NIDRVLIMSV-- 165 (246)
T ss_dssp GCSCHHHHHHHHHTT--T---------------------------SEEEEEECTTCCSGGGTTTGG--GCSEEEEECS--
T ss_pred cchhHHHHHHHHHHc--C---------------------------CeEEEEecCCCCHHHHHHHHh--cCCEEEEeee--
Confidence 445677777777631 1 233444533334467777775 6898888643
Q ss_pred HhhcCCCCCCCCHHHHHHHHHHHHHHHhCCCc----eeecccCCchhHHHHHHCCCCEEEecchHHHHH-HHHHHHHHHH
Q 018508 248 SASMGYLWDPGHRKVREMMRVAEKGVLGGGKA----YLAGFAMPHDAPLEMKSRGYHMVSGAVDVGLFR-SAAVEDVARF 322 (355)
Q Consensus 248 s~slG~~~~~~~p~v~~ai~~iv~aa~a~g~~----~~g~~~~d~~~a~~~~~~G~~~vs~~~D~~ll~-~~~~~~~~~~ 322 (355)
.-|..+|...|...+-++++.+...++|.. +-||+ +++.++.+++.|.+.+++|+. ++. .-.++.++.+
T Consensus 166 --~PGfgGQ~fi~~~l~KI~~lr~~~~~~~~~~~I~VDGGI--~~~ti~~~~~aGAD~~V~GSa--If~a~dp~~~i~~l 239 (246)
T 3inp_A 166 --NPGFGGQKFIPAMLDKAKEISKWISSTDRDILLEIDGGV--NPYNIAEIAVCGVNAFVAGSA--IFNSDSYKQTIDKM 239 (246)
T ss_dssp --CTTC--CCCCTTHHHHHHHHHHHHHHHTSCCEEEEESSC--CTTTHHHHHTTTCCEEEESHH--HHTSSCHHHHHHHH
T ss_pred --cCCCCCcccchHHHHHHHHHHHHHHhcCCCeeEEEECCc--CHHHHHHHHHcCCCEEEEehH--HhCCCCHHHHHHHH
Confidence 345556655666666677666665554422 23333 467888999999999999963 332 1234455555
Q ss_pred HHh
Q 018508 323 KMN 325 (355)
Q Consensus 323 r~~ 325 (355)
|..
T Consensus 240 ~~~ 242 (246)
T 3inp_A 240 RDE 242 (246)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
No 38
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=97.41 E-value=0.0019 Score=60.86 Aligned_cols=204 Identities=13% Similarity=0.103 Sum_probs=112.7
Q ss_pred HcCCcEEEEEEecCCHH------HHHHhhhcCCcEEEEeCCCC-C------------------CCHHHHHHHHHHHHhC-
Q 018508 81 QSNETLYGLFLLSFSPT------LAEISGLAGYDFVVVDMEHG-P------------------GGISDALACLHALAAT- 134 (355)
Q Consensus 81 ~~G~~~~gl~v~~~sp~------~~e~aa~~G~D~vilDlEh~-~------------------~~~~~a~~~i~a~~~~- 134 (355)
++|+..+-.|+..++|. .++.+... +|+|.|+...+ | ...+...+++++++..
T Consensus 12 ~~~~~~li~~i~~GdP~~~~~~~~~~~l~~~-aD~IElG~PfsdP~adGp~Iq~a~~~Al~~G~~~~~~~~~v~~ir~~~ 90 (271)
T 1ujp_A 12 SEGRAALIPYLTAGFPSREGFLQAVEEVLPY-ADLLEIGLPYSDPLGDGPVIQRASELALRKGMSVQGALELVREVRALT 90 (271)
T ss_dssp HTTBCEEEEEEETTSSCHHHHHHHHHHHGGG-CSSEEEECCCCC----CHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHC
T ss_pred HcCCceEEEEecCCCCChHHHHHHHHHHHhc-CCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcC
Confidence 35788888888776663 44556677 99999997665 2 1112222344555433
Q ss_pred CCCeEEc--CCCCC----HHHHHHHHhcCCCeEeecCCCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCcccccc
Q 018508 135 GTPAILR--LPESC----PTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSN 208 (355)
Q Consensus 135 g~~~iVR--V~~~~----~~~i~~aLdaGa~GImvP~Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~ 208 (355)
..++++= .|... ...++.+.++|++||++|-+-. +++..+++.++.. |
T Consensus 91 ~~Pii~m~y~n~v~~~g~~~f~~~~~~aG~dGviv~Dl~~-ee~~~~~~~~~~~-----g-------------------- 144 (271)
T 1ujp_A 91 EKPLFLMTYLNPVLAWGPERFFGLFKQAGATGVILPDLPP-DEDPGLVRLAQEI-----G-------------------- 144 (271)
T ss_dssp CSCEEEECCHHHHHHHCHHHHHHHHHHHTCCEEECTTCCG-GGCHHHHHHHHHH-----T--------------------
T ss_pred CCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEecCCCH-HHHHHHHHHHHHc-----C--------------------
Confidence 4555541 12110 1236778899999999998853 6666666666421 0
Q ss_pred CCCceEEEEEEccHHHHHHHHHHhccCCccEEEEChhhHHhhcCCCCCCC--CHHHHHHHHHHHHHHHhC-CCceeeccc
Q 018508 209 YEEELLIMCQVESEEGVKRAEDIAAVDGVDCVQMGPLDLSASMGYLWDPG--HRKVREMMRVAEKGVLGG-GKAYLAGFA 285 (355)
Q Consensus 209 ~n~~i~vi~mIET~~av~nieeIaavpgVD~l~iGp~DLs~slG~~~~~~--~p~v~~ai~~iv~aa~a~-g~~~~g~~~ 285 (355)
+.++.++--....+.+++|++. ...++++.. ..|+.|... .+.+.+.+ +..++. +.+.+.++.
T Consensus 145 ----l~~i~liap~s~~eri~~ia~~-~~gfiy~vs-----~~G~TG~~~~~~~~~~~~v----~~vr~~~~~Pv~vGfG 210 (271)
T 1ujp_A 145 ----LETVFLLAPTSTDARIATVVRH-ATGFVYAVS-----VTGVTGMRERLPEEVKDLV----RRIKARTALPVAVGFG 210 (271)
T ss_dssp ----CEEECEECTTCCHHHHHHHHTT-CCSCEEEEC-----C------------CCHHHH----HHHHTTCCSCEEEESC
T ss_pred ----CceEEEeCCCCCHHHHHHHHHh-CCCCEEEEe-----cCcccCCCCCCCccHHHHH----HHHHhhcCCCEEEEcC
Confidence 1122333222334688888864 223444432 134433221 11222333 334433 445444444
Q ss_pred C-CchhHHHHHHCCCCEEEecchHHHHHH---HHHHHHHHHHHhcC
Q 018508 286 M-PHDAPLEMKSRGYHMVSGAVDVGLFRS---AAVEDVARFKMNLT 327 (355)
Q Consensus 286 ~-d~~~a~~~~~~G~~~vs~~~D~~ll~~---~~~~~~~~~r~~~~ 327 (355)
- +++.++.+ .|.+.+.+|+-..-... .+++-++.+|..+.
T Consensus 211 I~t~e~a~~~--~~ADgVIVGSAi~~~~~~~~~~~~fv~~l~~~~~ 254 (271)
T 1ujp_A 211 VSGKATAAQA--AVADGVVVGSALVRALEEGRSLAPLLQEIRQGLQ 254 (271)
T ss_dssp CCSHHHHHHH--TTSSEEEECHHHHHHHHTTCCHHHHHHHHHHHHB
T ss_pred CCCHHHHHHh--cCCCEEEEChHHhcccchHHHHHHHHHHHHHHHH
Confidence 4 48888885 99999999987764443 46667777777653
No 39
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=97.39 E-value=0.0002 Score=65.93 Aligned_cols=169 Identities=12% Similarity=0.087 Sum_probs=102.4
Q ss_pred HHHHHhhhcCCcEEEEeCCCCCC------CHHHHHHHHHHHHhCCCCeE--EcCCCCCHHHHHHHHhcCCCeEeecCCCC
Q 018508 97 TLAEISGLAGYDFVVVDMEHGPG------GISDALACLHALAATGTPAI--LRLPESCPTWAKKALDLGPQGVMFPMIDS 168 (355)
Q Consensus 97 ~~~e~aa~~G~D~vilDlEh~~~------~~~~a~~~i~a~~~~g~~~i--VRV~~~~~~~i~~aLdaGa~GImvP~Ves 168 (355)
+.++.+...|+|++-+|.-|+.+ ..+..+ .++..-....+.- +-|+.++ .++..+.++|++.|.++. ++
T Consensus 21 ~~i~~l~~~g~d~~h~DVmDg~Fvpn~~~G~~~v~-~ir~~~~~~~~~dvhLmv~~p~-~~i~~~~~aGad~itvH~-Ea 97 (228)
T 3ovp_A 21 AECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVE-SLRKQLGQDPFFDMHMMVSKPE-QWVKPMAVAGANQYTFHL-EA 97 (228)
T ss_dssp HHHHHHHHTTCSCEEEEEEBSSSSSCBCBCHHHHH-HHHHHHCSSSCEEEEEECSCGG-GGHHHHHHHTCSEEEEEG-GG
T ss_pred HHHHHHHHcCCCEEEEEecCCCcCcccccCHHHHH-HHHHhhCCCCcEEEEEEeCCHH-HHHHHHHHcCCCEEEEcc-CC
Confidence 34567778899999999998853 333322 2332210122222 2345443 357889999999999965 55
Q ss_pred HHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEEccHHHHHHHHHHhccCCccEEEEChhhHH
Q 018508 169 PEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKRAEDIAAVDGVDCVQMGPLDLS 248 (355)
Q Consensus 169 aeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mIET~~av~nieeIaavpgVD~l~iGp~DLs 248 (355)
.+++.+.++.++.. | ..+++.+-+..-++.+++++. .+|.|.+.+-
T Consensus 98 ~~~~~~~i~~i~~~--G---------------------------~k~gval~p~t~~e~l~~~l~--~~D~Vl~msv--- 143 (228)
T 3ovp_A 98 TENPGALIKDIREN--G---------------------------MKVGLAIKPGTSVEYLAPWAN--QIDMALVMTV--- 143 (228)
T ss_dssp CSCHHHHHHHHHHT--T---------------------------CEEEEEECTTSCGGGTGGGGG--GCSEEEEESS---
T ss_pred chhHHHHHHHHHHc--C---------------------------CCEEEEEcCCCCHHHHHHHhc--cCCeEEEeee---
Confidence 45666677766521 1 234444543334677777775 5888887443
Q ss_pred hhcCCCCCCCCHHHHHHHHHHHHHHHhCCCc--eeecccCCchhHHHHHHCCCCEEEecch
Q 018508 249 ASMGYLWDPGHRKVREMMRVAEKGVLGGGKA--YLAGFAMPHDAPLEMKSRGYHMVSGAVD 307 (355)
Q Consensus 249 ~slG~~~~~~~p~v~~ai~~iv~aa~a~g~~--~~g~~~~d~~~a~~~~~~G~~~vs~~~D 307 (355)
.-|..++...|...+-++++.+.. .+.. +.||+ +++.++.+++.|.+.+++|+-
T Consensus 144 -~pGf~Gq~f~~~~l~ki~~lr~~~--~~~~I~VdGGI--~~~t~~~~~~aGAd~~VvGsa 199 (228)
T 3ovp_A 144 -EPGFGGQKFMEDMMPKVHWLRTQF--PSLDIEVDGGV--GPDTVHKCAEAGANMIVSGSA 199 (228)
T ss_dssp -CTTTCSCCCCGGGHHHHHHHHHHC--TTCEEEEESSC--STTTHHHHHHHTCCEEEESHH
T ss_pred -cCCCCCcccCHHHHHHHHHHHHhc--CCCCEEEeCCc--CHHHHHHHHHcCCCEEEEeHH
Confidence 346666666666555555443321 1222 34444 578889999999999999964
No 40
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=97.35 E-value=0.011 Score=55.82 Aligned_cols=195 Identities=13% Similarity=0.111 Sum_probs=113.2
Q ss_pred hHHHHHH----HcCCcEEEEEEecCCHH------HHHHhhhcCCcEEEEeCCCC-C-CC---HHH--------------H
Q 018508 74 ESLKYRL----QSNETLYGLFLLSFSPT------LAEISGLAGYDFVVVDMEHG-P-GG---ISD--------------A 124 (355)
Q Consensus 74 n~lk~~L----~~G~~~~gl~v~~~sp~------~~e~aa~~G~D~vilDlEh~-~-~~---~~~--------------a 124 (355)
|++++++ ++|+..+-.|+..+.|. .++.+...|+|+|=|....+ | .+ .+. .
T Consensus 5 ~ri~~~f~~~~~~~~~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~ 84 (271)
T 3nav_A 5 NRYQALFQRLSAAQQGAFVPFVTIGDPNPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDIC 84 (271)
T ss_dssp CHHHHHHHHHHHTTBCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHH
T ss_pred HHHHHHHHHHHhcCCCeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHH
Confidence 4455444 46888888898887653 34556778999999998876 2 11 221 1
Q ss_pred HHHHHHHHh--CCCCeEEc--CCCC---C-HHHHHHHHhcCCCeEeecCCCCHHHHHHHHHHcCCCCCCCCCCccccccc
Q 018508 125 LACLHALAA--TGTPAILR--LPES---C-PTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRA 196 (355)
Q Consensus 125 ~~~i~a~~~--~g~~~iVR--V~~~---~-~~~i~~aLdaGa~GImvP~Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra 196 (355)
-++++.++. ...+.++= .|.. . ...++++.++|++||++|-.- .|+...+++.++..
T Consensus 85 ~~~v~~~r~~~~~~Pivlm~Y~n~v~~~g~~~f~~~~~~aGvdGvIipDlp-~ee~~~~~~~~~~~-------------- 149 (271)
T 3nav_A 85 FELIAQIRARNPETPIGLLMYANLVYARGIDDFYQRCQKAGVDSVLIADVP-TNESQPFVAAAEKF-------------- 149 (271)
T ss_dssp HHHHHHHHHHCTTSCEEEEECHHHHHHTCHHHHHHHHHHHTCCEEEETTSC-GGGCHHHHHHHHHT--------------
T ss_pred HHHHHHHHhcCCCCCEEEEecCcHHHHHhHHHHHHHHHHCCCCEEEECCCC-HHHHHHHHHHHHHc--------------
Confidence 234455543 23444332 1211 1 224788999999999999864 46677777776521
Q ss_pred ccCCCCccccccCCCceEEEEEEccHH-HHHHHHHHhccCCccEEEEChhhHHhhcCCCCCC--CCHHHHHHHHHHHHHH
Q 018508 197 SGYGIDEGYLSNYEEELLIMCQVESEE-GVKRAEDIAAVDGVDCVQMGPLDLSASMGYLWDP--GHRKVREMMRVAEKGV 273 (355)
Q Consensus 197 ~~~g~~~~y~~~~n~~i~vi~mIET~~-av~nieeIaavpgVD~l~iGp~DLs~slG~~~~~--~~p~v~~ai~~iv~aa 273 (355)
| +.++.++ +|. -.+.+.+|++. +-++|+.-+ .+|..|.. ..+.+.+.++++
T Consensus 150 ---g------------l~~I~lv-ap~t~~eri~~i~~~-~~gfiY~vs-----~~GvTG~~~~~~~~~~~~v~~v---- 203 (271)
T 3nav_A 150 ---G------------IQPIFIA-PPTASDETLRAVAQL-GKGYTYLLS-----RAGVTGAETKANMPVHALLERL---- 203 (271)
T ss_dssp ---T------------CEEEEEE-CTTCCHHHHHHHHHH-CCSCEEECC-----CC--------CCHHHHHHHHHH----
T ss_pred ---C------------CeEEEEE-CCCCCHHHHHHHHHH-CCCeEEEEe-----ccCCCCcccCCchhHHHHHHHH----
Confidence 1 2233333 222 24677788754 345566533 23443321 234455555544
Q ss_pred HhC-CCceeecccC-CchhHHHHHHCCCCEEEecchHH
Q 018508 274 LGG-GKAYLAGFAM-PHDAPLEMKSRGYHMVSGAVDVG 309 (355)
Q Consensus 274 ~a~-g~~~~g~~~~-d~~~a~~~~~~G~~~vs~~~D~~ 309 (355)
++. ..+.+.++.- +++.++..+..|.+.+.+|+-..
T Consensus 204 r~~~~~Pv~vGfGIst~e~~~~~~~~gADgvIVGSAiv 241 (271)
T 3nav_A 204 QQFDAPPALLGFGISEPAQVKQAIEAGAAGAISGSAVV 241 (271)
T ss_dssp HHTTCCCEEECSSCCSHHHHHHHHHTTCSEEEESHHHH
T ss_pred HHhcCCCEEEECCCCCHHHHHHHHHcCCCEEEECHHHH
Confidence 333 3455555544 58888878899999999998765
No 41
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=97.27 E-value=0.0068 Score=57.10 Aligned_cols=188 Identities=13% Similarity=0.122 Sum_probs=107.9
Q ss_pred HcCCcEEEEEEecCCH------HHHHHhhhcCCcEEEEeCCCC-C-CC---HH--------------HHHHHHHHHHh--
Q 018508 81 QSNETLYGLFLLSFSP------TLAEISGLAGYDFVVVDMEHG-P-GG---IS--------------DALACLHALAA-- 133 (355)
Q Consensus 81 ~~G~~~~gl~v~~~sp------~~~e~aa~~G~D~vilDlEh~-~-~~---~~--------------~a~~~i~a~~~-- 133 (355)
++|+..+-.|+..++| +.++.+...|+|+|=|+...+ | .| .+ ..-++++.++.
T Consensus 14 ~~~~~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~ 93 (267)
T 3vnd_A 14 AQDKGAFVPFVTIGDPSPELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQH 93 (267)
T ss_dssp HHTCCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHC
T ss_pred hcCCCeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcC
Confidence 4688888889988776 245667789999999995554 1 11 11 11234455543
Q ss_pred CCCCeEEcC--CCC---C-HHHHHHHHhcCCCeEeecCCCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccc
Q 018508 134 TGTPAILRL--PES---C-PTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLS 207 (355)
Q Consensus 134 ~g~~~iVRV--~~~---~-~~~i~~aLdaGa~GImvP~Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~ 207 (355)
...++++=. |.. . ...++++.++|++||++|-.- .|+...+++.++.. |
T Consensus 94 ~~~Pivlm~Y~npv~~~g~e~f~~~~~~aGvdgvii~Dlp-~ee~~~~~~~~~~~-----------------g------- 148 (267)
T 3vnd_A 94 PDMPIGLLLYANLVFANGIDEFYTKAQAAGVDSVLIADVP-VEESAPFSKAAKAH-----------------G------- 148 (267)
T ss_dssp TTCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTSC-GGGCHHHHHHHHHT-----------------T-------
T ss_pred CCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEeCCCC-HhhHHHHHHHHHHc-----------------C-------
Confidence 234443321 211 1 224788999999999999764 46777777777521 1
Q ss_pred cCCCceEEEEEEccHH-HHHHHHHHhccCCccEEEEChhhHHhhcCCCCCCC--CHHHHHHHHHHHHHHHhC-CCceeec
Q 018508 208 NYEEELLIMCQVESEE-GVKRAEDIAAVDGVDCVQMGPLDLSASMGYLWDPG--HRKVREMMRVAEKGVLGG-GKAYLAG 283 (355)
Q Consensus 208 ~~n~~i~vi~mIET~~-av~nieeIaavpgVD~l~iGp~DLs~slG~~~~~~--~p~v~~ai~~iv~aa~a~-g~~~~g~ 283 (355)
+.++..| +|. -.+.+..|++. .-++|+.- ...|..|... .+.+.+.++ .+++. ..+.+.+
T Consensus 149 -----l~~i~li-aP~t~~eri~~i~~~-~~gfvY~v-----S~~GvTG~~~~~~~~~~~~v~----~vr~~~~~pv~vG 212 (267)
T 3vnd_A 149 -----IAPIFIA-PPNADADTLKMVSEQ-GEGYTYLL-----SRAGVTGTESKAGEPIENILT----QLAEFNAPPPLLG 212 (267)
T ss_dssp -----CEEECEE-CTTCCHHHHHHHHHH-CCSCEEES-----CCCCCC--------CHHHHHH----HHHTTTCCCEEEC
T ss_pred -----CeEEEEE-CCCCCHHHHHHHHHh-CCCcEEEE-----ecCCCCCCccCCcHHHHHHHH----HHHHhcCCCEEEE
Confidence 2223333 221 24688888863 12345553 1234444321 233444444 44443 3455545
Q ss_pred ccC-CchhHHHHHHCCCCEEEecchHH
Q 018508 284 FAM-PHDAPLEMKSRGYHMVSGAVDVG 309 (355)
Q Consensus 284 ~~~-d~~~a~~~~~~G~~~vs~~~D~~ 309 (355)
+.- +++.++..+..|.+.+++|+-..
T Consensus 213 fGI~~~e~~~~~~~~gADgvVVGSaiv 239 (267)
T 3vnd_A 213 FGIAEPEQVRAAIKAGAAGAISGSAVV 239 (267)
T ss_dssp SSCCSHHHHHHHHHTTCSEEEECHHHH
T ss_pred CCcCCHHHHHHHHHcCCCEEEECHHHH
Confidence 544 57888878899999999998543
No 42
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=96.83 E-value=0.0031 Score=57.76 Aligned_cols=188 Identities=13% Similarity=0.061 Sum_probs=109.0
Q ss_pred HHHHHhhhcCCcEEEEeCCCCCC--CHHHHHHHHHHHHh-CCCCeE--EcCCCCCHHHHHHHHhcCCCeEeecCC--CCH
Q 018508 97 TLAEISGLAGYDFVVVDMEHGPG--GISDALACLHALAA-TGTPAI--LRLPESCPTWAKKALDLGPQGVMFPMI--DSP 169 (355)
Q Consensus 97 ~~~e~aa~~G~D~vilDlEh~~~--~~~~a~~~i~a~~~-~g~~~i--VRV~~~~~~~i~~aLdaGa~GImvP~V--esa 169 (355)
+.++.+...|+|++=+|.-|+.+ +...-...++.++. ...+.. .=|++++ .++..++++|++||.++.- .+
T Consensus 21 ~~i~~~~~~Gad~ihldi~DG~fvp~~~~g~~~v~~lr~~~~~~~~vhlmv~dp~-~~i~~~~~aGadgv~vh~e~~~~- 98 (230)
T 1tqj_A 21 EEIKAVDEAGADWIHVDVMDGRFVPNITIGPLIVDAIRPLTKKTLDVHLMIVEPE-KYVEDFAKAGADIISVHVEHNAS- 98 (230)
T ss_dssp HHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHGGGCCSEEEEEEESSSGG-GTHHHHHHHTCSEEEEECSTTTC-
T ss_pred HHHHHHHHcCCCEEEEEEEecCCCcchhhhHHHHHHHHhhcCCcEEEEEEccCHH-HHHHHHHHcCCCEEEECcccccc-
Confidence 45677778899999999887742 21111134444432 222222 3344432 3578899999999999965 32
Q ss_pred HHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEE--ccHHHHHHHHHHhccCCccEEEEChhhH
Q 018508 170 EAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQV--ESEEGVKRAEDIAAVDGVDCVQMGPLDL 247 (355)
Q Consensus 170 eea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mI--ET~~av~nieeIaavpgVD~l~iGp~DL 247 (355)
++..++++.++-. ...+++.+ .|+ ++.+++++. ++|.|.+|+-.-
T Consensus 99 ~~~~~~~~~i~~~-----------------------------g~~~gv~~~p~t~--~e~~~~~~~--~~D~v~~msv~p 145 (230)
T 1tqj_A 99 PHLHRTLCQIREL-----------------------------GKKAGAVLNPSTP--LDFLEYVLP--VCDLILIMSVNP 145 (230)
T ss_dssp TTHHHHHHHHHHT-----------------------------TCEEEEEECTTCC--GGGGTTTGG--GCSEEEEESSCC
T ss_pred hhHHHHHHHHHHc-----------------------------CCcEEEEEeCCCc--HHHHHHHHh--cCCEEEEEEecc
Confidence 4555666655421 13456666 555 445566654 789998887643
Q ss_pred HhhcCCCCCCCCHHHHHHHHHHHHHHHhCC--CceeecccCCchhHHHHHHCCCCEEEecchHHHHHH-HHHHHHHHHHH
Q 018508 248 SASMGYLWDPGHRKVREMMRVAEKGVLGGG--KAYLAGFAMPHDAPLEMKSRGYHMVSGAVDVGLFRS-AAVEDVARFKM 324 (355)
Q Consensus 248 s~slG~~~~~~~p~v~~ai~~iv~aa~a~g--~~~~g~~~~d~~~a~~~~~~G~~~vs~~~D~~ll~~-~~~~~~~~~r~ 324 (355)
... ++...|...+-++++.+...+++ .++...-.-+.+.+..+.+.|.+.+++|+-+ +.. -..+.+..+|.
T Consensus 146 g~g----gq~~~~~~~~~i~~lr~~~~~~~~~~~I~v~GGI~~~~~~~~~~aGad~vvvGSai--~~a~d~~~~~~~l~~ 219 (230)
T 1tqj_A 146 GFG----GQSFIPEVLPKIRALRQMCDERGLDPWIEVDGGLKPNNTWQVLEAGANAIVAGSAV--FNAPNYAEAIAGVRN 219 (230)
T ss_dssp --------CCCCGGGHHHHHHHHHHHHHHTCCCEEEEESSCCTTTTHHHHHHTCCEEEESHHH--HTSSCHHHHHHHHHT
T ss_pred ccC----CccCcHHHHHHHHHHHHHHHhcCCCCcEEEECCcCHHHHHHHHHcCCCEEEECHHH--HCCCCHHHHHHHHHH
Confidence 322 23334555566666655554333 3322222234577888889999999999654 321 24455666665
Q ss_pred h
Q 018508 325 N 325 (355)
Q Consensus 325 ~ 325 (355)
.
T Consensus 220 ~ 220 (230)
T 1tqj_A 220 S 220 (230)
T ss_dssp C
T ss_pred H
Confidence 3
No 43
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=96.80 E-value=0.38 Score=46.06 Aligned_cols=204 Identities=15% Similarity=0.127 Sum_probs=119.2
Q ss_pred chHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeC---------CCC-CCCHHHHHHHHHHH-HhCCCCeEEc
Q 018508 73 PESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDM---------EHG-PGGISDALACLHAL-AATGTPAILR 141 (355)
Q Consensus 73 ~n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDl---------Eh~-~~~~~~a~~~i~a~-~~~g~~~iVR 141 (355)
...||++++.|+++. ..+.-+...+.++..+|||.|++-- .|. +.+.++....++.+ +....+++|=
T Consensus 18 a~~lr~l~~~~~~i~--~~~ayD~~sA~l~e~aG~dai~vs~~s~a~~~G~pD~~~vt~~em~~~~~~I~r~~~~pviaD 95 (305)
T 3ih1_A 18 ANRFRALVEANEILQ--IPGAHDAMAALVARNTGFLALYLSGAAYTASKGLPDLGIVTSTEVAERARDLVRATDLPVLVD 95 (305)
T ss_dssp HHHHHHHHHSSSCEE--EEBCSSHHHHHHHHHTTCSCEEECHHHHHHHHTCCSSSCSCHHHHHHHHHHHHHHHCCCEEEE
T ss_pred HHHHHHHHhCCCcEE--EecCcCHHHHHHHHHcCCCEEEECcHHHHHhCCCCCCCcCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 467999999998854 3456788888888899999999853 333 45677766655554 3456677776
Q ss_pred CCCC--CHH----HHHHHHhcCCCeEee-----cCC---------CCHHHHHHHHHHcCCCCCCCCCCcccccccccCCC
Q 018508 142 LPES--CPT----WAKKALDLGPQGVMF-----PMI---------DSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGI 201 (355)
Q Consensus 142 V~~~--~~~----~i~~aLdaGa~GImv-----P~V---------esaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~ 201 (355)
.+.. ++. .++++.++|+.||.+ |+. -+.++...-+++++..
T Consensus 96 ~d~Gyg~~~~v~~~v~~l~~aGaagv~iED~~~~krcGh~~gk~l~~~~e~~~rI~Aa~~A------------------- 156 (305)
T 3ih1_A 96 IDTGFGGVLNVARTAVEMVEAKVAAVQIEDQQLPKKCGHLNGKKLVTTEELVQKIKAIKEV------------------- 156 (305)
T ss_dssp CTTCSSSHHHHHHHHHHHHHTTCSEEEEECBCSSCCTTCTTCCCBCCHHHHHHHHHHHHHH-------------------
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCcEEEECCCCCCcccCCCCCCcccCHHHHHHHHHHHHHc-------------------
Confidence 6654 333 256678899988743 432 1233332222222211
Q ss_pred CccccccCCCceEEEEEEccH------HHHHHHHHHhccCCccEEEE-ChhhHHhhcCCCCCCCCHHHHHHHHHHHHHHH
Q 018508 202 DEGYLSNYEEELLIMCQVESE------EGVKRAEDIAAVDGVDCVQM-GPLDLSASMGYLWDPGHRKVREMMRVAEKGVL 274 (355)
Q Consensus 202 ~~~y~~~~n~~i~vi~mIET~------~av~nieeIaavpgVD~l~i-Gp~DLs~slG~~~~~~~p~v~~ai~~iv~aa~ 274 (355)
+....|++=.|.. ++++.+....+. |.|+||+ |.- .++ .+.++.++
T Consensus 157 --------~~~~~I~ARtda~~~~g~~~ai~Ra~ay~eA-GAD~i~~e~~~-------------~~~---~~~~i~~~-- 209 (305)
T 3ih1_A 157 --------APSLYIVARTDARGVEGLDEAIERANAYVKA-GADAIFPEALQ-------------SEE---EFRLFNSK-- 209 (305)
T ss_dssp --------CTTSEEEEEECCHHHHCHHHHHHHHHHHHHH-TCSEEEETTCC-------------SHH---HHHHHHHH--
T ss_pred --------CCCeEEEEeeccccccCHHHHHHHHHHHHHc-CCCEEEEcCCC-------------CHH---HHHHHHHH--
Confidence 1235677777765 566666666643 8999998 321 122 22333333
Q ss_pred hCCCceeecc---cCCc-hhHHHHHHCCCCEEEecchHH-HHHHHHHHHHHHHHHh
Q 018508 275 GGGKAYLAGF---AMPH-DAPLEMKSRGYHMVSGAVDVG-LFRSAAVEDVARFKMN 325 (355)
Q Consensus 275 a~g~~~~g~~---~~d~-~~a~~~~~~G~~~vs~~~D~~-ll~~~~~~~~~~~r~~ 325 (355)
-.++....+ ..+| -..+++.++||+.++++.-.. ....++.+.+..++..
T Consensus 210 -~~~P~~~n~~~~g~tp~~~~~eL~~lGv~~v~~~~~~~raa~~a~~~~~~~i~~~ 264 (305)
T 3ih1_A 210 -VNAPLLANMTEFGKTPYYSAEEFANMGFQMVIYPVTSLRVAAKAYENVFTLIKET 264 (305)
T ss_dssp -SCSCBEEECCTTSSSCCCCHHHHHHTTCSEEEECSHHHHHHHHHHHHHHHHHHHH
T ss_pred -cCCCEEEeecCCCCCCCCCHHHHHHcCCCEEEEchHHHHHHHHHHHHHHHHHHhc
Confidence 234543222 1122 346788999999999997542 2233344444445443
No 44
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=96.78 E-value=0.0047 Score=55.81 Aligned_cols=187 Identities=14% Similarity=0.090 Sum_probs=99.1
Q ss_pred HHHHHhhhcCCcEEEEeCCCCCC--CHHHHHHHHHHHHh-CCCC--eEEcCCCCCH-HHHHHHHhcCCCeEeecCC--CC
Q 018508 97 TLAEISGLAGYDFVVVDMEHGPG--GISDALACLHALAA-TGTP--AILRLPESCP-TWAKKALDLGPQGVMFPMI--DS 168 (355)
Q Consensus 97 ~~~e~aa~~G~D~vilDlEh~~~--~~~~a~~~i~a~~~-~g~~--~iVRV~~~~~-~~i~~aLdaGa~GImvP~V--es 168 (355)
+.++.+...|+|++=||..|+++ +.....+.++.++. .+.+ +.+-||+ + ..+..+.++|+++|.++.- .+
T Consensus 27 ~~i~~~~~~G~d~i~l~~~dg~f~~~~~~~~~~i~~l~~~~~~~~~v~l~vnd--~~~~v~~~~~~Gad~v~vh~~~~~~ 104 (230)
T 1rpx_A 27 EQVKAIEQAGCDWIHVDVMDGRFVPNITIGPLVVDSLRPITDLPLDVHLMIVE--PDQRVPDFIKAGADIVSVHCEQSST 104 (230)
T ss_dssp HHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHGGGCCSCEEEEEESSS--HHHHHHHHHHTTCSEEEEECSTTTC
T ss_pred HHHHHHHHCCCCEEEEeeccCCcccccccCHHHHHHHHhccCCcEEEEEEecC--HHHHHHHHHHcCCCEEEEEecCccc
Confidence 45677778899999888655432 11111233333332 2333 4455665 4 3688889999999988876 44
Q ss_pred HHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEE--ccHHHHHHHHHHhccCCccEEEEChhh
Q 018508 169 PEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQV--ESEEGVKRAEDIAAVDGVDCVQMGPLD 246 (355)
Q Consensus 169 aeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mI--ET~~av~nieeIaavpgVD~l~iGp~D 246 (355)
++..++++.++.. | ..++..+ .|+ .+.+.++. +++|.|++..-.
T Consensus 105 -~~~~~~~~~~~~~--g---------------------------~~ig~~~~p~t~--~e~~~~~~--~~~d~vl~~~~~ 150 (230)
T 1rpx_A 105 -IHLHRTINQIKSL--G---------------------------AKAGVVLNPGTP--LTAIEYVL--DAVDLVLIMSVN 150 (230)
T ss_dssp -SCHHHHHHHHHHT--T---------------------------SEEEEEECTTCC--GGGGTTTT--TTCSEEEEESSC
T ss_pred -hhHHHHHHHHHHc--C---------------------------CcEEEEeCCCCC--HHHHHHHH--hhCCEEEEEEEc
Confidence 4445555555421 1 2244444 332 23333433 468887543221
Q ss_pred HHhhcCCCCCCCCHHHHHHHHHHHHHHHhC--CCceeecccCCchhHHHHHHCCCCEEEecchHHHHHH-HHHHHHHHHH
Q 018508 247 LSASMGYLWDPGHRKVREMMRVAEKGVLGG--GKAYLAGFAMPHDAPLEMKSRGYHMVSGAVDVGLFRS-AAVEDVARFK 323 (355)
Q Consensus 247 Ls~slG~~~~~~~p~v~~ai~~iv~aa~a~--g~~~~g~~~~d~~~a~~~~~~G~~~vs~~~D~~ll~~-~~~~~~~~~r 323 (355)
-|..++...+.....++++.+...+. ..+++.+..-+++.+..+++.|.+.+.+|+-+. .. -..+.+..++
T Consensus 151 ----pg~~g~~~~~~~~~~i~~l~~~~~~~~~~~pi~v~GGI~~~n~~~~~~aGad~vvvgSaI~--~a~dp~~a~~~l~ 224 (230)
T 1rpx_A 151 ----PGFGGQSFIESQVKKISDLRKICAERGLNPWIEVDGGVGPKNAYKVIEAGANALVAGSAVF--GAPDYAEAIKGIK 224 (230)
T ss_dssp ----TTCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEEEESSCCTTTHHHHHHHTCCEEEESHHHH--TSSCHHHHHHHHH
T ss_pred ----CCCCCccccHHHHHHHHHHHHHHHhcCCCceEEEECCCCHHHHHHHHHcCCCEEEEChhhh--CCCCHHHHHHHHH
Confidence 13333333344444444444443322 333322223346788888899999999997643 21 1334455555
Q ss_pred Hh
Q 018508 324 MN 325 (355)
Q Consensus 324 ~~ 325 (355)
..
T Consensus 225 ~~ 226 (230)
T 1rpx_A 225 TS 226 (230)
T ss_dssp TC
T ss_pred HH
Confidence 43
No 45
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=96.72 E-value=0.29 Score=43.51 Aligned_cols=156 Identities=18% Similarity=0.126 Sum_probs=90.5
Q ss_pred HHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCC---CeEEcCCCCCHHHHHHHHhcCCCeEeecCC-CCHHHHH
Q 018508 98 LAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGT---PAILRLPESCPTWAKKALDLGPQGVMFPMI-DSPEAAK 173 (355)
Q Consensus 98 ~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~---~~iVRV~~~~~~~i~~aLdaGa~GImvP~V-esaeea~ 173 (355)
.++.+...|+|+|.++..+ .+.+++...++.+...+. .++|. ..+..+++.|+++|-++.- ...++++
T Consensus 34 ~~~~~~~~G~~~v~lr~~~--~~~~~~~~~~~~l~~~~~~~~~l~v~------~~~~~a~~~gad~v~l~~~~~~~~~~~ 105 (221)
T 1yad_A 34 RIIITIQNEVDFIHIRERS--KSAADILKLLDLIFEGGIDKRKLVMN------GRVDIALFSTIHRVQLPSGSFSPKQIR 105 (221)
T ss_dssp HHHHHHGGGCSEEEECCTT--SCHHHHHHHHHHHHHTTCCGGGEEEE------SCHHHHHTTTCCEEEECTTSCCHHHHH
T ss_pred HHHHHHHCCCCEEEEccCC--CCHHHHHHHHHHHHHhcCcCCeEEEe------ChHHHHHHcCCCEEEeCCCccCHHHHH
Confidence 3666778899999998554 456666777766654322 24442 1356788999999999865 3344443
Q ss_pred HHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEEccHHHHHHHHHHhccCCccEEEEChhhHHhhcCC
Q 018508 174 EAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKRAEDIAAVDGVDCVQMGPLDLSASMGY 253 (355)
Q Consensus 174 ~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mIET~~av~nieeIaavpgVD~l~iGp~DLs~slG~ 253 (355)
++ . + ...+++-+.|++-+..+. ..|+|.|.+|+.=-+.+ .
T Consensus 106 ~~----~-~-----------------------------~~~ig~sv~t~~~~~~a~----~~gaD~i~~~~~f~~~~--~ 145 (221)
T 1yad_A 106 AR----F-P-----------------------------HLHIGRSVHSLEEAVQAE----KEDADYVLFGHVFETDC--K 145 (221)
T ss_dssp HH----C-T-----------------------------TCEEEEEECSHHHHHHHH----HTTCSEEEEECCC-------
T ss_pred HH----C-C-----------------------------CCEEEEEcCCHHHHHHHH----hCCCCEEEECCccccCC--C
Confidence 32 1 1 124555667765443332 24799999988400100 0
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCCc--eeecccCCchhHHHHHHCCCCEEEecchH
Q 018508 254 LWDPGHRKVREMMRVAEKGVLGGGKA--YLAGFAMPHDAPLEMKSRGYHMVSGAVDV 308 (355)
Q Consensus 254 ~~~~~~p~v~~ai~~iv~aa~a~g~~--~~g~~~~d~~~a~~~~~~G~~~vs~~~D~ 308 (355)
++. .+.-.+.+.++.. ...++ ..||+ +++.+..+++.|++++.+++-+
T Consensus 146 ~g~--~~~~~~~l~~~~~---~~~~pvia~GGI--~~~nv~~~~~~Ga~gv~vgs~i 195 (221)
T 1yad_A 146 KGL--EGRGVSLLSDIKQ---RISIPVIAIGGM--TPDRLRDVKQAGADGIAVMSGI 195 (221)
T ss_dssp -------CHHHHHHHHHH---HCCSCEEEESSC--CGGGHHHHHHTTCSEEEESHHH
T ss_pred CCC--CCCCHHHHHHHHH---hCCCCEEEECCC--CHHHHHHHHHcCCCEEEEhHHh
Confidence 000 0111233333322 22444 35555 6888999999999999999754
No 46
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=96.68 E-value=0.12 Score=45.37 Aligned_cols=155 Identities=18% Similarity=0.119 Sum_probs=88.6
Q ss_pred HHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHH----HhCCCCeEEcCCCCCHHHHHHHHhcCCCeEeecCC-CCHHH
Q 018508 97 TLAEISGLAGYDFVVVDMEHGPGGISDALACLHAL----AATGTPAILRLPESCPTWAKKALDLGPQGVMFPMI-DSPEA 171 (355)
Q Consensus 97 ~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~----~~~g~~~iVRV~~~~~~~i~~aLdaGa~GImvP~V-esaee 171 (355)
+.++.+...|+|+|-++.... +.+...+.++.+ ...+..++|- ..+..++++|+++|.+|.. ...++
T Consensus 30 ~~~~~~~~~G~~~i~l~~~~~--~~~~~~~~~~~l~~~~~~~~v~v~v~------~~~~~a~~~gad~v~l~~~~~~~~~ 101 (215)
T 1xi3_A 30 ESVREALEGGATAIQMRIKNA--PTREMYEIGKTLRQLTREYDALFFVD------DRVDVALAVDADGVQLGPEDMPIEV 101 (215)
T ss_dssp HHHHHHHHTTCSEEEECCCSC--CHHHHHHHHHHHHHHHHHTTCEEEEE------SCHHHHHHHTCSEEEECTTSCCHHH
T ss_pred HHHHHHHHCCCCEEEECCCCC--CHHHHHHHHHHHHHHHHHcCCeEEEc------ChHHHHHHcCCCEEEECCccCCHHH
Confidence 567888889999998885432 344333333322 3345666662 2456788999999999854 34444
Q ss_pred HHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEEccHHHHHHHHHHhccCCccEEEEChh-h-HHh
Q 018508 172 AKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKRAEDIAAVDGVDCVQMGPL-D-LSA 249 (355)
Q Consensus 172 a~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mIET~~av~nieeIaavpgVD~l~iGp~-D-Ls~ 249 (355)
++++ . + .+.+.+-+.|++-+..+. ..|+|.|.+++- + .+.
T Consensus 102 ~~~~----~-~-----------------------------~~~~~v~~~t~~e~~~~~----~~g~d~i~~~~~~~~~~~ 143 (215)
T 1xi3_A 102 AKEI----A-P-----------------------------NLIIGASVYSLEEALEAE----KKGADYLGAGSVFPTKTK 143 (215)
T ss_dssp HHHH----C-T-----------------------------TSEEEEEESSHHHHHHHH----HHTCSEEEEECSSCC---
T ss_pred HHHh----C-C-----------------------------CCEEEEecCCHHHHHHHH----hcCCCEEEEcCCccCCCC
Confidence 4332 1 1 123455567876554322 137999998752 1 110
Q ss_pred hcCCCCCCCCHHHHHHHHHHHHHHHhCCCce--eecccCCchhHHHHHHCCCCEEEecchH
Q 018508 250 SMGYLWDPGHRKVREMMRVAEKGVLGGGKAY--LAGFAMPHDAPLEMKSRGYHMVSGAVDV 308 (355)
Q Consensus 250 slG~~~~~~~p~v~~ai~~iv~aa~a~g~~~--~g~~~~d~~~a~~~~~~G~~~vs~~~D~ 308 (355)
-| +.+. -.+.+.++... ..+++ .||+ +++.++.+++.|++.+.+++-.
T Consensus 144 -~~--~~~~---~~~~l~~l~~~---~~~pvia~GGI--~~~nv~~~~~~Ga~gv~vgs~i 193 (215)
T 1xi3_A 144 -ED--ARVI---GLEGLRKIVES---VKIPVVAIGGI--NKDNAREVLKTGVDGIAVISAV 193 (215)
T ss_dssp --C--CCCC---HHHHHHHHHHH---CSSCEEEESSC--CTTTHHHHHTTTCSEEEESHHH
T ss_pred -CC--CCCc---CHHHHHHHHHh---CCCCEEEECCc--CHHHHHHHHHcCCCEEEEhHHH
Confidence 01 1111 22333333322 24443 3444 3788888899999999999643
No 47
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=96.60 E-value=0.24 Score=45.76 Aligned_cols=162 Identities=17% Similarity=0.119 Sum_probs=94.1
Q ss_pred HHHHHhhhcCCcEEEEeCCCCC-------CCHHHHHH----HHHHHHhCCCCeEEcCCCCCHHHHHHHHhcCCCeEeecC
Q 018508 97 TLAEISGLAGYDFVVVDMEHGP-------GGISDALA----CLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPM 165 (355)
Q Consensus 97 ~~~e~aa~~G~D~vilDlEh~~-------~~~~~a~~----~i~a~~~~g~~~iVRV~~~~~~~i~~aLdaGa~GImvP~ 165 (355)
+.++.+...|.++|.|-.-+.+ .+..+..+ +...++.++.+.+| |+ ...+ ++..|++||-++.
T Consensus 47 ~~~~~al~~Gv~~vqlR~K~~~~~~~~~~l~~~~~~~~a~~l~~l~~~~~~~liI--nd--~~~l--A~~~gAdGVHLg~ 120 (243)
T 3o63_A 47 QFAEAALAGGVDIIQLRDKGSPGELRFGPLQARDELAACEILADAAHRYGALFAV--ND--RADI--ARAAGADVLHLGQ 120 (243)
T ss_dssp HHHHHHHHTTCSEEEECCTTCHHHHHHCSCCHHHHHHHHHHHHHHHHHTTCEEEE--ES--CHHH--HHHHTCSEEEECT
T ss_pred HHHHHHHHCCCCEEEEccCCCCccccccCCCHHHHHHHHHHHHHHHHhhCCEEEE--eC--HHHH--HHHhCCCEEEecC
Confidence 5677888999999999877743 44444333 33344567777776 32 3333 7778999999987
Q ss_pred CCC-HHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEEccHHHHHHHHHHhccCCccEEEECh
Q 018508 166 IDS-PEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKRAEDIAAVDGVDCVQMGP 244 (355)
Q Consensus 166 Ves-aeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mIET~~av~nieeIaavpgVD~l~iGp 244 (355)
-.- ..+++++ +. ....+++-+-|++-+..+.+ .|+|.|.+|+
T Consensus 121 ~dl~~~~~r~~---~~------------------------------~~~~iG~S~ht~~Ea~~A~~----~GaDyI~vgp 163 (243)
T 3o63_A 121 RDLPVNVARQI---LA------------------------------PDTLIGRSTHDPDQVAAAAA----GDADYFCVGP 163 (243)
T ss_dssp TSSCHHHHHHH---SC------------------------------TTCEEEEEECSHHHHHHHHH----SSCSEEEECC
T ss_pred CcCCHHHHHHh---hC------------------------------CCCEEEEeCCCHHHHHHHhh----CCCCEEEEcC
Confidence 543 3444432 11 12356677777765544433 4899999998
Q ss_pred hhHHhhcCCCC-CCCCHHHHHHHHHHHHHHHhCCCc--eeecccCCchhHHHHHHCCCCEEEecchHH
Q 018508 245 LDLSASMGYLW-DPGHRKVREMMRVAEKGVLGGGKA--YLAGFAMPHDAPLEMKSRGYHMVSGAVDVG 309 (355)
Q Consensus 245 ~DLs~slG~~~-~~~~p~v~~ai~~iv~aa~a~g~~--~~g~~~~d~~~a~~~~~~G~~~vs~~~D~~ 309 (355)
---+. . -+. .+.. .+.+.++.... ...++ ..||+ +++.+..+++.|++++.+++.+.
T Consensus 164 vf~T~-t-K~~~~~~g---l~~l~~~~~~~-~~~iPvvAiGGI--~~~ni~~~~~aGa~gvav~sai~ 223 (243)
T 3o63_A 164 CWPTP-T-KPGRAAPG---LGLVRVAAELG-GDDKPWFAIGGI--NAQRLPAVLDAGARRIVVVRAIT 223 (243)
T ss_dssp SSCCC-C------CCC---HHHHHHHHTC----CCCEEEESSC--CTTTHHHHHHTTCCCEEESHHHH
T ss_pred ccCCC-C-CCCcchhh---HHHHHHHHHhc-cCCCCEEEecCC--CHHHHHHHHHcCCCEEEEeHHHh
Confidence 31000 0 000 0111 22233322210 01344 34555 67889999999999999987553
No 48
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=96.55 E-value=0.25 Score=48.43 Aligned_cols=219 Identities=18% Similarity=0.147 Sum_probs=123.6
Q ss_pred CCCCccccccccccccccC-CCCCCCCCCCCCCCCCCCchHHHHHHHcCCcEEEEEE-ecCCHHHHHHhhhcCCcEEEEe
Q 018508 36 GNKSKIVFPKLKLTPSVSR-SPSDLSPGDPLSPSPSPSPESLKYRLQSNETLYGLFL-LSFSPTLAEISGLAGYDFVVVD 113 (355)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~n~lk~~L~~G~~~~gl~v-~~~sp~~~e~aa~~G~D~vilD 113 (355)
..+....|.++.|-|..|. .|++ ++. .++|.+.+.-+-|++.-=+ ....++++..++..|- .-+|
T Consensus 9 ~~~~~~~fddv~lvp~~~~~~~~~------vdl-----~t~lt~~~~l~~Pii~apM~~vs~~~lA~avA~aGG-lg~i- 75 (366)
T 4fo4_A 9 IAKEALTFDDVLLVPAHSTVLPNT------ADL-----RTRLTKNIALNIPMVSASMDTVTEARLAIALAQEGG-IGFI- 75 (366)
T ss_dssp CCCCCCCGGGEEECCCCCCCCGGG------CBC-----CEEEETTEEESSSEEECCCTTTCSHHHHHHHHHTTC-EEEE-
T ss_pred hhcccCCcceEEEECCCCCCChhh------ccc-----ceecccccccCCCEEeCCCCCCChHHHHHHHHHcCC-ceEe-
Confidence 4456678999999997442 2111 111 1222222223345443222 2356777766666554 2233
Q ss_pred CCCCCCCHHHHHHHHHHHHhCC---CCeEEcCCCCCHHHHHHHHhcCCCeEee--cCCCCHHHHHHHHHHcCCCCCCCCC
Q 018508 114 MEHGPGGISDALACLHALAATG---TPAILRLPESCPTWAKKALDLGPQGVMF--PMIDSPEAAKEAVSYCRFPPSGVRG 188 (355)
Q Consensus 114 lEh~~~~~~~a~~~i~a~~~~g---~~~iVRV~~~~~~~i~~aLdaGa~GImv--P~Vesaeea~~vv~a~~~pP~G~Rg 188 (355)
|...+.++.++.++.++..+ ....+-++......+..++++|++.|.+ ++..+.. +.+.++.++..
T Consensus 76 --~~~~s~e~~~~~i~~vk~~~~l~vga~vg~~~~~~~~~~~lieaGvd~I~idta~G~~~~-~~~~I~~ik~~------ 146 (366)
T 4fo4_A 76 --HKNMSIEQQAAQVHQVKISGGLRVGAAVGAAPGNEERVKALVEAGVDVLLIDSSHGHSEG-VLQRIRETRAA------ 146 (366)
T ss_dssp --CSSSCHHHHHHHHHHHHTTTSCCCEEECCSCTTCHHHHHHHHHTTCSEEEEECSCTTSHH-HHHHHHHHHHH------
T ss_pred --ecCCCHHHHHHHHHHHHhcCceeEEEEeccChhHHHHHHHHHhCCCCEEEEeCCCCCCHH-HHHHHHHHHHh------
Confidence 34467788888887776532 2223334444567789999999999887 6655543 33334433310
Q ss_pred CcccccccccCCCCccccccCCCceEE-EEEEccHHHHHHHHHHhccCCccEEEEC--hhhH--Hhh-cCCCCCCCCHHH
Q 018508 189 SAHTVVRASGYGIDEGYLSNYEEELLI-MCQVESEEGVKRAEDIAAVDGVDCVQMG--PLDL--SAS-MGYLWDPGHRKV 262 (355)
Q Consensus 189 ~g~~~~ra~~~g~~~~y~~~~n~~i~v-i~mIET~~av~nieeIaavpgVD~l~iG--p~DL--s~s-lG~~~~~~~p~v 262 (355)
...+.+ +..+-|++....+.+. |+|+|.+| ++-- +.. .|. ..|.
T Consensus 147 ---------------------~p~v~Vi~G~v~t~e~A~~a~~a----GAD~I~vG~gpGs~~~tr~~~g~----g~p~- 196 (366)
T 4fo4_A 147 ---------------------YPHLEIIGGNVATAEGARALIEA----GVSAVKVGIGPGSICTTRIVTGV----GVPQ- 196 (366)
T ss_dssp ---------------------CTTCEEEEEEECSHHHHHHHHHH----TCSEEEECSSCSTTBCHHHHHCC----CCCH-
T ss_pred ---------------------cCCCceEeeeeCCHHHHHHHHHc----CCCEEEEecCCCCCCCcccccCc----ccch-
Confidence 002333 4468898888777652 78999996 2210 000 011 1232
Q ss_pred HHHHHHHHHHHHhCCCceee--cccCCchhHHHHHHCCCCEEEecch
Q 018508 263 REMMRVAEKGVLGGGKAYLA--GFAMPHDAPLEMKSRGYHMVSGAVD 307 (355)
Q Consensus 263 ~~ai~~iv~aa~a~g~~~~g--~~~~d~~~a~~~~~~G~~~vs~~~D 307 (355)
..++..+.++++..+++++. ++ .++.++..++++|.+.+.+|+-
T Consensus 197 ~~~l~~v~~~~~~~~iPVIA~GGI-~~~~di~kala~GAd~V~vGs~ 242 (366)
T 4fo4_A 197 ITAIADAAGVANEYGIPVIADGGI-RFSGDISKAIAAGASCVMVGSM 242 (366)
T ss_dssp HHHHHHHHHHHGGGTCCEEEESCC-CSHHHHHHHHHTTCSEEEESTT
T ss_pred HHHHHHHHHHHhhcCCeEEEeCCC-CCHHHHHHHHHcCCCEEEEChH
Confidence 34566666666666776433 33 3567788889999999999864
No 49
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=96.55 E-value=0.017 Score=53.99 Aligned_cols=194 Identities=14% Similarity=0.159 Sum_probs=112.2
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHH------HHHHhhhcCCcEEEEeCCCC-C-CC---HHHHH-----------HHHHHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPT------LAEISGLAGYDFVVVDMEHG-P-GG---ISDAL-----------ACLHAL 131 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~------~~e~aa~~G~D~vilDlEh~-~-~~---~~~a~-----------~~i~a~ 131 (355)
|+++++++ +..+-.|+..+.|. .++.+...|+|.|=|-+=.+ | .| .+.+. +++..+
T Consensus 5 ~ri~~~f~--~~ali~yitaG~P~~~~t~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~g~~~~~~~~~~ 82 (252)
T 3tha_A 5 VDFRKFYK--ENANVAYTVLGYPNLQTSEAFLQRLDQSPIDILELGVAYSDPIADGEIIADAAKIALDQGVDIHSVFELL 82 (252)
T ss_dssp CCGGGSCS--SSEEEEEEETTSSCHHHHHHHHHTGGGSSCSEEEEECCCSCCCSCCCHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHhc--CCCeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCcHHHHHHHHHHHHCCCCHHHHHHHH
Confidence 45555553 67788888876652 34556789999999998887 2 22 22211 111111
Q ss_pred HhC--CCCeEEcC--CCC---C-HHHHHHHHhcCCCeEeecCCCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCc
Q 018508 132 AAT--GTPAILRL--PES---C-PTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDE 203 (355)
Q Consensus 132 ~~~--g~~~iVRV--~~~---~-~~~i~~aLdaGa~GImvP~Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~ 203 (355)
+.- ..+.++-. |.. . ...++++.++|++|+++|.. -.||...+.+.++.. |
T Consensus 83 ~~~r~~~Pivlm~Y~N~i~~~G~e~F~~~~~~aGvdG~IipDL-P~eE~~~~~~~~~~~-----------------G--- 141 (252)
T 3tha_A 83 ARIKTKKALVFMVYYNLIFSYGLEKFVKKAKSLGICALIVPEL-SFEESDDLIKECERY-----------------N--- 141 (252)
T ss_dssp HHCCCSSEEEEECCHHHHHHHCHHHHHHHHHHTTEEEEECTTC-CGGGCHHHHHHHHHT-----------------T---
T ss_pred HHHhcCCCEEEEeccCHHHHhhHHHHHHHHHHcCCCEEEeCCC-CHHHHHHHHHHHHHc-----------------C---
Confidence 111 12222211 110 1 12467889999999999998 456777777776521 1
Q ss_pred cccccCCCceEEEEEEccHH-HHHHHHHHhccCCccEEEEChhhHHhhcCCCCCCCCHHHHHHHHHHHHHHHhC-CCcee
Q 018508 204 GYLSNYEEELLIMCQVESEE-GVKRAEDIAAVDGVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVAEKGVLGG-GKAYL 281 (355)
Q Consensus 204 ~y~~~~n~~i~vi~mIET~~-av~nieeIaavpgVD~l~iGp~DLs~slG~~~~~~~p~v~~ai~~iv~aa~a~-g~~~~ 281 (355)
+.++.+| +|. -.+.+.+|++. .-++++.-+ .+|..|.. ..+...+...++..|+. ..+.+
T Consensus 142 ---------l~~I~lv-aP~t~~eRi~~ia~~-a~gFiY~Vs-----~~GvTG~~--~~~~~~~~~~v~~vr~~~~~Pv~ 203 (252)
T 3tha_A 142 ---------IALITLV-SVTTPKERVKKLVKH-AKGFIYLLA-----SIGITGTK--SVEEAILQDKVKEIRSFTNLPIF 203 (252)
T ss_dssp ---------CEECEEE-ETTSCHHHHHHHHTT-CCSCEEEEC-----CSCSSSCS--HHHHHHHHHHHHHHHTTCCSCEE
T ss_pred ---------CeEEEEe-CCCCcHHHHHHHHHh-CCCeEEEEe-----cCCCCCcc--cCCCHHHHHHHHHHHHhcCCcEE
Confidence 2233333 232 25888888864 234565532 35766643 23334456666777765 34445
Q ss_pred ecccC-CchhHHHHHHCCCCEEEecchHH
Q 018508 282 AGFAM-PHDAPLEMKSRGYHMVSGAVDVG 309 (355)
Q Consensus 282 g~~~~-d~~~a~~~~~~G~~~vs~~~D~~ 309 (355)
.++.- ++++++.+.+ +.+++.+|+=..
T Consensus 204 vGfGIst~e~a~~~~~-~ADGVIVGSAiV 231 (252)
T 3tha_A 204 VGFGIQNNQDVKRMRK-VADGVIVGTSIV 231 (252)
T ss_dssp EESSCCSHHHHHHHTT-TSSEEEECHHHH
T ss_pred EEcCcCCHHHHHHHHh-cCCEEEECHHHH
Confidence 45544 6788887654 799999997664
No 50
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=96.52 E-value=0.18 Score=47.42 Aligned_cols=190 Identities=16% Similarity=0.115 Sum_probs=104.3
Q ss_pred hHHHHHHHcCC-----------cEEEEEEecCCHH-HHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHH-hCCCCeEE
Q 018508 74 ESLKYRLQSNE-----------TLYGLFLLSFSPT-LAEISGLAGYDFVVVDMEHGPGGISDALACLHALA-ATGTPAIL 140 (355)
Q Consensus 74 n~lk~~L~~G~-----------~~~gl~v~~~sp~-~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~-~~g~~~iV 140 (355)
..|++.|++.. |.-|......+|. +++.....|+++|=+=.|+.-+ ..-.+.++.++ ....+++.
T Consensus 41 ~~f~~al~~~~~~~IaE~K~asPs~g~i~~~~~p~~~A~~y~~~GA~~isvltd~~~f--~Gs~~~l~~ir~~v~lPvl~ 118 (272)
T 3qja_A 41 LDVMAALREPGIGVIAEVKRASPSAGALATIADPAKLAQAYQDGGARIVSVVTEQRRF--QGSLDDLDAVRASVSIPVLR 118 (272)
T ss_dssp CCHHHHHTSSSCEEEEEEC-------------CHHHHHHHHHHTTCSEEEEECCGGGH--HHHHHHHHHHHHHCSSCEEE
T ss_pred CCHHHHHhcCCCeEEEEEecCCCCCCccCCCCCHHHHHHHHHHcCCCEEEEecChhhc--CCCHHHHHHHHHhCCCCEEE
Confidence 34777776533 2334443333554 5556667899997654443321 22122333332 34555554
Q ss_pred cCCCCCHHHHHHHHhcCCCeEeecC-CCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEE
Q 018508 141 RLPESCPTWAKKALDLGPQGVMFPM-IDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQV 219 (355)
Q Consensus 141 RV~~~~~~~i~~aLdaGa~GImvP~-Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mI 219 (355)
.=--.++.++..++.+||++|++.. .-+.++++.+++.++.. | +.+++-+
T Consensus 119 kdfiid~~qv~~A~~~GAD~VlLi~a~l~~~~l~~l~~~a~~l-----------------G------------l~~lvev 169 (272)
T 3qja_A 119 KDFVVQPYQIHEARAHGADMLLLIVAALEQSVLVSMLDRTESL-----------------G------------MTALVEV 169 (272)
T ss_dssp ESCCCSHHHHHHHHHTTCSEEEEEGGGSCHHHHHHHHHHHHHT-----------------T------------CEEEEEE
T ss_pred CccccCHHHHHHHHHcCCCEEEEecccCCHHHHHHHHHHHHHC-----------------C------------CcEEEEc
Confidence 4333466679999999999998832 23467888888877531 1 2355666
Q ss_pred ccHHHHHHHHHHhccCCccEEEEChhhHHhhcCCCCCCCCHHHHHHHHHHHHHHHhCCCceeeccc-CCchhHHHHHHCC
Q 018508 220 ESEEGVKRAEDIAAVDGVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVAEKGVLGGGKAYLAGFA-MPHDAPLEMKSRG 298 (355)
Q Consensus 220 ET~~av~nieeIaavpgVD~l~iGp~DLs~slG~~~~~~~p~v~~ai~~iv~aa~a~g~~~~g~~~-~d~~~a~~~~~~G 298 (355)
-|.+-++.+.+ . |+|.|-+++-||.. ..++-.. ..++...+. .+++++..-. .++++++.+.+.|
T Consensus 170 ~t~ee~~~A~~---~-Gad~IGv~~r~l~~-----~~~dl~~----~~~l~~~v~-~~~pvVaegGI~t~edv~~l~~~G 235 (272)
T 3qja_A 170 HTEQEADRALK---A-GAKVIGVNARDLMT-----LDVDRDC----FARIAPGLP-SSVIRIAESGVRGTADLLAYAGAG 235 (272)
T ss_dssp SSHHHHHHHHH---H-TCSEEEEESBCTTT-----CCBCTTH----HHHHGGGSC-TTSEEEEESCCCSHHHHHHHHHTT
T ss_pred CCHHHHHHHHH---C-CCCEEEECCCcccc-----cccCHHH----HHHHHHhCc-ccCEEEEECCCCCHHHHHHHHHcC
Confidence 67765555443 2 78988888655421 1111111 223322221 1344322222 3578999999999
Q ss_pred CCEEEecchH
Q 018508 299 YHMVSGAVDV 308 (355)
Q Consensus 299 ~~~vs~~~D~ 308 (355)
++.+.+|+-.
T Consensus 236 adgvlVGsal 245 (272)
T 3qja_A 236 ADAVLVGEGL 245 (272)
T ss_dssp CSEEEECHHH
T ss_pred CCEEEEcHHH
Confidence 9999999644
No 51
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=96.43 E-value=0.68 Score=44.13 Aligned_cols=205 Identities=13% Similarity=0.130 Sum_probs=119.8
Q ss_pred chHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEE-e-----CCCC-----CCCHHHHHHHHHHH-HhCCCCeEE
Q 018508 73 PESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVV-D-----MEHG-----PGGISDALACLHAL-AATGTPAIL 140 (355)
Q Consensus 73 ~n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vil-D-----lEh~-----~~~~~~a~~~i~a~-~~~g~~~iV 140 (355)
...||++++.|++++. .+.-++..+.++..+|||.|++ | .-++ +.+.++....++.+ +....+++|
T Consensus 11 ~~~lr~l~~~~~~i~~--~~a~D~~sA~l~e~aGf~ai~vs~~s~a~~~~G~pD~~~vt~~em~~~~~~I~r~~~~Pvia 88 (298)
T 3eoo_A 11 GAKFRAAVAAEQPLQV--VGAITAYAAKMAEAVGFKAVYLSGGGVAANSLGIPDLGISTMDDVLVDANRITNATNLPLLV 88 (298)
T ss_dssp HHHHHHHHHHSSSEEE--EECSSHHHHHHHHHHTCSCEEECHHHHHHHTTCCCSSSCCCHHHHHHHHHHHHHHCCSCEEE
T ss_pred HHHHHHHHhCCCcEEE--ecCCCHHHHHHHHHcCCCEEEECcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhhcCCeEEE
Confidence 4689999999998653 3566888888888899999998 3 2233 34567766666654 456677777
Q ss_pred cCCCC--CHH----HHHHHHhcCCCeEee-----cCC---------CCHH-HHHHHHHHcCCCCCCCCCCcccccccccC
Q 018508 141 RLPES--CPT----WAKKALDLGPQGVMF-----PMI---------DSPE-AAKEAVSYCRFPPSGVRGSAHTVVRASGY 199 (355)
Q Consensus 141 RV~~~--~~~----~i~~aLdaGa~GImv-----P~V---------esae-ea~~vv~a~~~pP~G~Rg~g~~~~ra~~~ 199 (355)
=.+.. ++. .++++.++|+.||.+ |+. -+.+ .++++..+..-.
T Consensus 89 D~d~Gyg~~~~v~~~v~~l~~aGaagv~iEDq~~~k~cGh~~gk~l~~~~e~~~ri~Aa~~A~----------------- 151 (298)
T 3eoo_A 89 DIDTGWGGAFNIARTIRSFIKAGVGAVHLEDQVGQKRCGHRPGKECVPAGEMVDRIKAAVDAR----------------- 151 (298)
T ss_dssp ECTTCSSSHHHHHHHHHHHHHTTCSEEEEECBCCCCCTTCCCCCCBCCHHHHHHHHHHHHHHC-----------------
T ss_pred ECCCCCCCHHHHHHHHHHHHHhCCeEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHhc-----------------
Confidence 66654 333 256778899987654 321 1233 333333322110
Q ss_pred CCCccccccCCCceEEEEEEccHH------HHHHHHHHhccCCccEEEE-ChhhHHhhcCCCCCCCCHHHHHHHHHHHHH
Q 018508 200 GIDEGYLSNYEEELLIMCQVESEE------GVKRAEDIAAVDGVDCVQM-GPLDLSASMGYLWDPGHRKVREMMRVAEKG 272 (355)
Q Consensus 200 g~~~~y~~~~n~~i~vi~mIET~~------av~nieeIaavpgVD~l~i-Gp~DLs~slG~~~~~~~p~v~~ai~~iv~a 272 (355)
.+..+.|++=.|+.. +++.+...++ -|.|+||+ |.. .+ +.+.++.++
T Consensus 152 ---------~~~~~~I~ARTDa~~~~gldeai~Ra~ay~~-AGAD~if~~~~~-------------~~---ee~~~~~~~ 205 (298)
T 3eoo_A 152 ---------TDETFVIMARTDAAAAEGIDAAIERAIAYVE-AGADMIFPEAMK-------------TL---DDYRRFKEA 205 (298)
T ss_dssp ---------SSTTSEEEEEECTHHHHHHHHHHHHHHHHHH-TTCSEEEECCCC-------------SH---HHHHHHHHH
T ss_pred ---------cCCCeEEEEeehhhhhcCHHHHHHHHHhhHh-cCCCEEEeCCCC-------------CH---HHHHHHHHH
Confidence 023567888888763 4444444443 38999998 321 12 223444444
Q ss_pred HHhCCCceeecc---cCCc-hhHHHHHHCCCCEEEecchHH-HHHHHHHHHHHHHHHh
Q 018508 273 VLGGGKAYLAGF---AMPH-DAPLEMKSRGYHMVSGAVDVG-LFRSAAVEDVARFKMN 325 (355)
Q Consensus 273 a~a~g~~~~g~~---~~d~-~~a~~~~~~G~~~vs~~~D~~-ll~~~~~~~~~~~r~~ 325 (355)
. .++....+ ..+| -..+++.++||+.++++.-.. ....++.+.+..+++.
T Consensus 206 ~---~~Pl~~n~~~~g~tp~~~~~eL~~lGv~~v~~~~~~~raa~~a~~~~~~~i~~~ 260 (298)
T 3eoo_A 206 V---KVPILANLTEFGSTPLFTLDELKGANVDIALYCCGAYRAMNKAALNFYETVRRD 260 (298)
T ss_dssp H---CSCBEEECCTTSSSCCCCHHHHHHTTCCEEEECSHHHHHHHHHHHHHHHHHHHH
T ss_pred c---CCCeEEEeccCCCCCCCCHHHHHHcCCeEEEEchHHHHHHHHHHHHHHHHHHHc
Confidence 3 24432222 1122 346788999999999997652 2334444455555543
No 52
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=96.41 E-value=0.0042 Score=57.21 Aligned_cols=186 Identities=9% Similarity=0.016 Sum_probs=109.1
Q ss_pred HHHHHhhhcCCcEEEEeCCCCCC--CHHHHHHHHHHHHh-CCCC--eEEcCCCCCHHHHHHHHhcCCCeEeecCCC-CHH
Q 018508 97 TLAEISGLAGYDFVVVDMEHGPG--GISDALACLHALAA-TGTP--AILRLPESCPTWAKKALDLGPQGVMFPMID-SPE 170 (355)
Q Consensus 97 ~~~e~aa~~G~D~vilDlEh~~~--~~~~a~~~i~a~~~-~g~~--~iVRV~~~~~~~i~~aLdaGa~GImvP~Ve-sae 170 (355)
+.++.+ ..|+||+=+|.-|+.+ +..--...+++++. ...+ +-.-|.+++. ++..+.++||++|.++.-. + .
T Consensus 17 ~~i~~~-~~gad~lHvDvmDG~fvpn~t~G~~~v~~lr~~~~~~~dvhLmv~dp~~-~i~~~~~aGAd~itvh~Ea~~-~ 93 (231)
T 3ctl_A 17 EQIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLATKPLDCHLMVTRPQD-YIAQLARAGADFITLHPETIN-G 93 (231)
T ss_dssp HHHHHH-HTTCSCEEEEEECSSSSSCCCBCHHHHHHHHTTCCSCEEEEEESSCGGG-THHHHHHHTCSEEEECGGGCT-T
T ss_pred HHHHHH-HcCCCEEEEEEEeCccCccchhcHHHHHHHHhccCCcEEEEEEecCHHH-HHHHHHHcCCCEEEECcccCC-c
Confidence 345677 8999999999888741 21111224444443 2232 2333443322 5788999999999988533 3 4
Q ss_pred HHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEE--ccHHHHHHHHHHhccCCccEEEEChhhHH
Q 018508 171 AAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQV--ESEEGVKRAEDIAAVDGVDCVQMGPLDLS 248 (355)
Q Consensus 171 ea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mI--ET~~av~nieeIaavpgVD~l~iGp~DLs 248 (355)
.+.++++.++.. | ..+++.+ .|| ++.+++++. ++|.|.+.+
T Consensus 94 ~~~~~i~~i~~~--G---------------------------~k~gv~lnp~tp--~~~~~~~l~--~~D~Vlvms---- 136 (231)
T 3ctl_A 94 QAFRLIDEIRRH--D---------------------------MKVGLILNPETP--VEAMKYYIH--KADKITVMT---- 136 (231)
T ss_dssp THHHHHHHHHHT--T---------------------------CEEEEEECTTCC--GGGGTTTGG--GCSEEEEES----
T ss_pred cHHHHHHHHHHc--C---------------------------CeEEEEEECCCc--HHHHHHHHh--cCCEEEEee----
Confidence 567777776531 1 1233333 344 666777765 789888743
Q ss_pred hhcCCCCCCCCHHHHHHHHHHHHHHHhCCCc--e--eecccCCchhHHHHHHCCCCEEEec-chHHHHHHH-HHHHHHHH
Q 018508 249 ASMGYLWDPGHRKVREMMRVAEKGVLGGGKA--Y--LAGFAMPHDAPLEMKSRGYHMVSGA-VDVGLFRSA-AVEDVARF 322 (355)
Q Consensus 249 ~slG~~~~~~~p~v~~ai~~iv~aa~a~g~~--~--~g~~~~d~~~a~~~~~~G~~~vs~~-~D~~ll~~~-~~~~~~~~ 322 (355)
..-|..+|...|...+-++++.+...+.|.. + -|| -+++.+..+++.|.+.+++| +-+.- ..- ..+.++.+
T Consensus 137 V~pGfggQ~f~~~~l~kI~~lr~~~~~~~~~~~I~VdGG--I~~~~~~~~~~aGAd~~V~G~saif~-~~d~~~~~~~~l 213 (231)
T 3ctl_A 137 VDPGFAGQPFIPEMLDKLAELKAWREREGLEYEIEVDGS--CNQATYEKLMAAGADVFIVGTSGLFN-HAENIDEAWRIM 213 (231)
T ss_dssp SCTTCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEEEESC--CSTTTHHHHHHHTCCEEEECTTTTGG-GCSSHHHHHHHH
T ss_pred eccCcCCccccHHHHHHHHHHHHHHhccCCCceEEEECC--cCHHHHHHHHHcCCCEEEEccHHHhC-CCCcHHHHHHHH
Confidence 3345556655666776666666655544322 2 232 24677888999999999999 54321 101 34445555
Q ss_pred HHh
Q 018508 323 KMN 325 (355)
Q Consensus 323 r~~ 325 (355)
|..
T Consensus 214 ~~~ 216 (231)
T 3ctl_A 214 TAQ 216 (231)
T ss_dssp HHH
T ss_pred HHH
Confidence 553
No 53
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=96.35 E-value=0.13 Score=50.12 Aligned_cols=218 Identities=14% Similarity=0.104 Sum_probs=118.2
Q ss_pred CCCCccccccccccccccCCCCCCCCCCCCCCCCCCCchHHHHHHHcCCcEEEEEE-ecCCHHHHHHhhh-cCCcEEEEe
Q 018508 36 GNKSKIVFPKLKLTPSVSRSPSDLSPGDPLSPSPSPSPESLKYRLQSNETLYGLFL-LSFSPTLAEISGL-AGYDFVVVD 113 (355)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~lk~~L~~G~~~~gl~v-~~~sp~~~e~aa~-~G~D~vilD 113 (355)
+.+....|.++.|-|..|. ..| ..++. ..+|.+.+.-+-|++.--+ ....++++..++. .|..++
T Consensus 8 ~~~~~~~fddv~l~p~~~~----~~~-~~vdl-----~t~l~~~~~l~~Pii~apM~~vt~~~lA~avA~~GGlgii--- 74 (361)
T 3khj_A 8 NIGKGLTFEDILLVPNYSE----VLP-REVSL-----ETKLTKNVSLKIPLISSAMDTVTEHLMAVGMARLGGIGII--- 74 (361)
T ss_dssp EEEECCCGGGEEECCCCBC----CCG-GGCCC-----CEESSSSCEESSSEEECSSTTTCSHHHHHHHHHTTCEEEE---
T ss_pred ccccCCCcceEEEECCCCC----CCH-HHccC-----ceecccccccCCCEEeecCCCCCcHHHHHHHHHcCCCeEE---
Confidence 3345667889999987431 111 11111 1112112222334332222 2346677765554 444444
Q ss_pred CCCCCCCHHHHHHHHHHHHhC-CCCeEEcCCCCCHHHHHHHHhcCCCeEee--cCCCCHHHHHHHHHHcCCCCCCCCCCc
Q 018508 114 MEHGPGGISDALACLHALAAT-GTPAILRLPESCPTWAKKALDLGPQGVMF--PMIDSPEAAKEAVSYCRFPPSGVRGSA 190 (355)
Q Consensus 114 lEh~~~~~~~a~~~i~a~~~~-g~~~iVRV~~~~~~~i~~aLdaGa~GImv--P~Vesaeea~~vv~a~~~pP~G~Rg~g 190 (355)
|...+.++..+.++.++.. ..++.+=+.-.....+..++++|++.|.+ ++-++ +.+.+.++.++..
T Consensus 75 --~~~~s~e~~~~~I~~vk~~~~~pvga~ig~~~~e~a~~l~eaGad~I~ld~a~G~~-~~~~~~i~~i~~~-------- 143 (361)
T 3khj_A 75 --HKNMDMESQVNEVLKVKNSGGLRVGAAIGVNEIERAKLLVEAGVDVIVLDSAHGHS-LNIIRTLKEIKSK-------- 143 (361)
T ss_dssp --CSSSCHHHHHHHHHHHHHTTCCCCEEEECTTCHHHHHHHHHTTCSEEEECCSCCSB-HHHHHHHHHHHHH--------
T ss_pred --ecCCCHHHHHHHHHHHHhccCceEEEEeCCCHHHHHHHHHHcCcCeEEEeCCCCCc-HHHHHHHHHHHHh--------
Confidence 3455677777777776543 33433333333366788899999999886 55444 3333334333210
Q ss_pred ccccccccCCCCccccccCCCceEEE-EEEccHHHHHHHHHHhccCCccEEEEC--hhhHH--hh-cCCCCCCCCHHHHH
Q 018508 191 HTVVRASGYGIDEGYLSNYEEELLIM-CQVESEEGVKRAEDIAAVDGVDCVQMG--PLDLS--AS-MGYLWDPGHRKVRE 264 (355)
Q Consensus 191 ~~~~ra~~~g~~~~y~~~~n~~i~vi-~mIET~~av~nieeIaavpgVD~l~iG--p~DLs--~s-lG~~~~~~~p~v~~ 264 (355)
- .+.++ ..+-|++.+..+.+ -|+|+|.+| ++... .. .|. ..|. ..
T Consensus 144 -------------------~-~~~Vivg~v~t~e~A~~l~~----aGaD~I~VG~~~Gs~~~tr~~~g~----g~p~-~~ 194 (361)
T 3khj_A 144 -------------------M-NIDVIVGNVVTEEATKELIE----NGADGIKVGIGPGSICTTRIVAGV----GVPQ-IT 194 (361)
T ss_dssp -------------------C-CCEEEEEEECSHHHHHHHHH----TTCSEEEECSSCCTTCCHHHHTCB----CCCH-HH
T ss_pred -------------------c-CCcEEEccCCCHHHHHHHHH----cCcCEEEEecCCCcCCCcccccCC----CCCc-HH
Confidence 0 13344 37889887766654 288999986 22110 00 011 1233 24
Q ss_pred HHHHHHHHHHhCCCcee--ecccCCchhHHHHHHCCCCEEEecch
Q 018508 265 MMRVAEKGVLGGGKAYL--AGFAMPHDAPLEMKSRGYHMVSGAVD 307 (355)
Q Consensus 265 ai~~iv~aa~a~g~~~~--g~~~~d~~~a~~~~~~G~~~vs~~~D 307 (355)
++..+.+.++..+++++ |++ .+++++..++++|.+.+.+|+=
T Consensus 195 ~i~~v~~~~~~~~iPVIA~GGI-~~~~di~kala~GAd~V~vGs~ 238 (361)
T 3khj_A 195 AIEKCSSVASKFGIPIIADGGI-RYSGDIGKALAVGASSVMIGSI 238 (361)
T ss_dssp HHHHHHHHHHHHTCCEEEESCC-CSHHHHHHHHHHTCSEEEESTT
T ss_pred HHHHHHHHHhhcCCeEEEECCC-CCHHHHHHHHHcCCCEEEEChh
Confidence 55666666665566643 233 3567888889999999998854
No 54
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=96.29 E-value=0.0078 Score=53.65 Aligned_cols=173 Identities=11% Similarity=0.042 Sum_probs=91.0
Q ss_pred HHHHHhhhcCCcEEEEeCCCCC--CCHHHHHHHHHHHHh-CCCCe--EEcCCCCCHHHHHHHHhcCCCeEeecCCCCHHH
Q 018508 97 TLAEISGLAGYDFVVVDMEHGP--GGISDALACLHALAA-TGTPA--ILRLPESCPTWAKKALDLGPQGVMFPMIDSPEA 171 (355)
Q Consensus 97 ~~~e~aa~~G~D~vilDlEh~~--~~~~~a~~~i~a~~~-~g~~~--iVRV~~~~~~~i~~aLdaGa~GImvP~Vesaee 171 (355)
+.++.+...|+|++-+|.-++. .....-.+.++.++. .+.+. .+-|++. ...+..++++|+++|.++-..+ +.
T Consensus 20 ~~~~~~~~~G~~~i~~~~~dg~~~~~~~~g~~~i~~i~~~~~~~~~v~l~v~d~-~~~i~~~~~~gad~v~vh~~~~-~~ 97 (220)
T 2fli_A 20 SELARIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKHSKLVFDCHLMVVDP-ERYVEAFAQAGADIMTIHTEST-RH 97 (220)
T ss_dssp HHHHHHHHTTCCEEEEEEEBSSSSSCBCBCHHHHHHHHTTCCSEEEEEEESSSG-GGGHHHHHHHTCSEEEEEGGGC-SC
T ss_pred HHHHHHHHcCCCEEEEEeecCCCCCccccCHHHHHHHHHhCCCCEEEEEeecCH-HHHHHHHHHcCCCEEEEccCcc-cc
Confidence 4567777889999877754443 221111222333322 23332 3334443 2256889999999999976544 44
Q ss_pred HHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEEccHHHHHHHHHHhccCCccEEEEChhhHHhhc
Q 018508 172 AKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKRAEDIAAVDGVDCVQMGPLDLSASM 251 (355)
Q Consensus 172 a~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mIET~~av~nieeIaavpgVD~l~iGp~DLs~sl 251 (355)
...+++.++.. | ..+++.+-+..-.+.++++. +++|.|.+..-+ -
T Consensus 98 ~~~~~~~~~~~--g---------------------------~~i~~~~~~~t~~e~~~~~~--~~~d~vl~~~~~----~ 142 (220)
T 2fli_A 98 IHGALQKIKAA--G---------------------------MKAGVVINPGTPATALEPLL--DLVDQVLIMTVN----P 142 (220)
T ss_dssp HHHHHHHHHHT--T---------------------------SEEEEEECTTSCGGGGGGGT--TTCSEEEEESSC----T
T ss_pred HHHHHHHHHHc--C---------------------------CcEEEEEcCCCCHHHHHHHH--hhCCEEEEEEEC----C
Confidence 44555555311 1 12444452222223333333 468888652221 2
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHhC--CCce--eecccCCchhHHHHHHCCCCEEEecchH
Q 018508 252 GYLWDPGHRKVREMMRVAEKGVLGG--GKAY--LAGFAMPHDAPLEMKSRGYHMVSGAVDV 308 (355)
Q Consensus 252 G~~~~~~~p~v~~ai~~iv~aa~a~--g~~~--~g~~~~d~~~a~~~~~~G~~~vs~~~D~ 308 (355)
|..++...+...+-++++.+.+.+. ..++ .||+ +++.+..+++.|.+.+.+|+-+
T Consensus 143 g~~g~~~~~~~~~~i~~~~~~~~~~~~~~~i~v~GGI--~~~~~~~~~~~Gad~vvvGsai 201 (220)
T 2fli_A 143 GFGGQAFIPECLEKVATVAKWRDEKGLSFDIEVDGGV--DNKTIRACYEAGANVFVAGSYL 201 (220)
T ss_dssp TCSSCCCCGGGHHHHHHHHHHHHHTTCCCEEEEESSC--CTTTHHHHHHHTCCEEEESHHH
T ss_pred CCcccccCHHHHHHHHHHHHHHHhcCCCceEEEECcC--CHHHHHHHHHcCCCEEEEChHH
Confidence 4444433444444444444444333 3332 3444 3677777888899999999654
No 55
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=96.25 E-value=0.007 Score=54.92 Aligned_cols=170 Identities=14% Similarity=0.100 Sum_probs=96.4
Q ss_pred HHHHHhhhcCCcEEEEeCCCCCC------CHHHHHHHHHHHHh-CCCC--eEEcCCCCCHHHHHHHHhcCCCeEeecCCC
Q 018508 97 TLAEISGLAGYDFVVVDMEHGPG------GISDALACLHALAA-TGTP--AILRLPESCPTWAKKALDLGPQGVMFPMID 167 (355)
Q Consensus 97 ~~~e~aa~~G~D~vilDlEh~~~------~~~~a~~~i~a~~~-~g~~--~iVRV~~~~~~~i~~aLdaGa~GImvP~Ve 167 (355)
+.++.+...|+|++=+|.-|+++ ..+.+ +.++. ...+ +-+=|+++ ...+..++++|+++|.++--.
T Consensus 23 ~~i~~~~~~Gad~i~l~i~Dg~fv~~~~~~~~~~----~~lr~~~~~~~~v~lmv~d~-~~~i~~~~~agad~v~vH~~~ 97 (228)
T 1h1y_A 23 AEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVI----QSLRKHTKAYLDCHLMVTNP-SDYVEPLAKAGASGFTFHIEV 97 (228)
T ss_dssp HHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHH----HHHHTTCCSEEEEEEESSCG-GGGHHHHHHHTCSEEEEEGGG
T ss_pred HHHHHHHHcCCCEEEEEEecCCcCcchhhCHHHH----HHHHhhcCCcEEEEEEecCH-HHHHHHHHHcCCCEEEECCCC
Confidence 45677788899998788665542 23333 33322 2222 22445553 235888999999999998876
Q ss_pred CHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEE--ccHHHHHHHHHHhcc-CCccEEEECh
Q 018508 168 SPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQV--ESEEGVKRAEDIAAV-DGVDCVQMGP 244 (355)
Q Consensus 168 saeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mI--ET~~av~nieeIaav-pgVD~l~iGp 244 (355)
+.+.+..+++.++.. ...+++.+ .|+ ++.++++... -++|.|.+++
T Consensus 98 ~~~~~~~~~~~i~~~-----------------------------g~~igv~~~p~t~--~e~~~~~~~~~~~~d~vl~~s 146 (228)
T 1h1y_A 98 SRDNWQELIQSIKAK-----------------------------GMRPGVSLRPGTP--VEEVFPLVEAENPVELVLVMT 146 (228)
T ss_dssp CTTTHHHHHHHHHHT-----------------------------TCEEEEEECTTSC--GGGGHHHHHSSSCCSEEEEES
T ss_pred cccHHHHHHHHHHHc-----------------------------CCCEEEEEeCCCC--HHHHHHHHhcCCCCCEEEEEe
Confidence 544324555554311 12455666 443 4455565531 1589999976
Q ss_pred hhHHhhcCCCCCCCCHHHHHHHHHHHHHHHhCCCceeecccCCchhHHHHHHCCCCEEEecchH
Q 018508 245 LDLSASMGYLWDPGHRKVREMMRVAEKGVLGGGKAYLAGFAMPHDAPLEMKSRGYHMVSGAVDV 308 (355)
Q Consensus 245 ~DLs~slG~~~~~~~p~v~~ai~~iv~aa~a~g~~~~g~~~~d~~~a~~~~~~G~~~vs~~~D~ 308 (355)
-.- |..++...+...+.++++.+.. .+.++...-.-+++.+..+++.|.+.+++|+-+
T Consensus 147 v~p----g~~g~~~~~~~l~~i~~~~~~~--~~~pi~v~GGI~~~ni~~~~~aGaD~vvvGsai 204 (228)
T 1h1y_A 147 VEP----GFGGQKFMPEMMEKVRALRKKY--PSLDIEVDGGLGPSTIDVAASAGANCIVAGSSI 204 (228)
T ss_dssp SCT----TCSSCCCCGGGHHHHHHHHHHC--TTSEEEEESSCSTTTHHHHHHHTCCEEEESHHH
T ss_pred ecC----CCCcccCCHHHHHHHHHHHHhc--CCCCEEEECCcCHHHHHHHHHcCCCEEEECHHH
Confidence 532 3333433444444444443322 144432222234577888888899999999654
No 56
>3odm_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta-barrel, lyase; 2.95A {Clostridium perfringens}
Probab=96.13 E-value=0.059 Score=55.31 Aligned_cols=159 Identities=17% Similarity=0.125 Sum_probs=109.4
Q ss_pred cCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCC------CeEEcCCCCCHH----H------HHH----HHh-cCC---Ce
Q 018508 105 AGYDFVVVDMEHGPGGISDALACLHALAATGT------PAILRLPESCPT----W------AKK----ALD-LGP---QG 160 (355)
Q Consensus 105 ~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~------~~iVRV~~~~~~----~------i~~----aLd-aGa---~G 160 (355)
.|+|=++.|.|--..+..+.++++......+. ....|||.+.-+ . |-. +.. .|. ..
T Consensus 63 lGcdE~MwD~EGK~td~~~~~kl~s~~~~~~~~lG~d~flT~RvPNp~~E~~er~~l~lesi~~a~d~a~~y~g~~aI~~ 142 (560)
T 3odm_A 63 LGIEEVMIDFEGKLTPYHQTSQIALGLISNGIIPGKDVRVTPRIPNANKESVFRQLMSIMSIIETNVQSKELTGTPAISE 142 (560)
T ss_dssp CCCCEEEEECSSBCCCTTHHHHHHHHHHTTTCCBTTTBEEEEECCCTTTSCHHHHHHHHHHHHHHHHHHHHHHSSCSCCE
T ss_pred CCCceeeecCCCCcCcHHHHHHHHHhhhhcCCCCCCceEEecCCCChhhhhHHHHHHHHHHHHHHHHHHHHhCCCcccCe
Confidence 69999999999887777888887654433332 357899987421 1 100 111 143 46
Q ss_pred EeecCCCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEEccHHHHHHHHHHhc-------
Q 018508 161 VMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKRAEDIAA------- 233 (355)
Q Consensus 161 ImvP~Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mIET~~av~nieeIaa------- 233 (355)
+++||+++++++.++...++.- .|. .+ ...|.. .....+.|++++||.+.+.|+.+|+.
T Consensus 143 yIISMT~sasDlL~V~~L~k~~-aGL-------~~-~e~g~~-----~~~~~i~VVPLFETieDL~~a~~Il~~ll~~~r 208 (560)
T 3odm_A 143 VVVPMIETGKEISEFQDRVNSV-VDM-------GN-KNYKTK-----LDLNSVRIIPLVEDVPALANIDRILDEHYEIEK 208 (560)
T ss_dssp EEESSCCSHHHHHHHHHHHHHH-HHH-------HH-HHCSSC-----CCTTSSEEEEEECCHHHHHTTHHHHHHHHHHHH
T ss_pred EEecCCCCHHHHHHHHHHHHHH-hcc-------cc-cccCCC-----CCCCCCCeECCcCCHHHHHhhHHHHHHHHHHHH
Confidence 9999999999999887777420 000 00 000100 01235789999999999999999974
Q ss_pred ----cCCccEEEEChhhHHhhcCCCCCCCCHHHHHHHHHHHHHHHhCCCc
Q 018508 234 ----VDGVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVAEKGVLGGGKA 279 (355)
Q Consensus 234 ----vpgVD~l~iGp~DLs~slG~~~~~~~p~v~~ai~~iv~aa~a~g~~ 279 (355)
.++.=-||+|-.|=+.+-|+.. ....+..|+.++.+.++++|++
T Consensus 209 ~l~~~~~~QeVMLGYSDSaKDgG~la--S~waly~Aq~~L~~~~~e~gI~ 256 (560)
T 3odm_A 209 SKGHILKDLRIMIARSDTAMSYGLIS--GVLSVLMAVDGAYKWGEKHGVT 256 (560)
T ss_dssp HTTCCCSEEEEEEESHHHHHHHCHHH--HHHHHHHHHHHHHHHHHHHTCE
T ss_pred HhcccCCeEEEEEeeccCcchhhHHH--HHHHHHHHHHHHHHHHHHcCCc
Confidence 2456689999999998888642 2346788999999999999986
No 57
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=95.98 E-value=0.5 Score=41.82 Aligned_cols=160 Identities=18% Similarity=0.173 Sum_probs=87.2
Q ss_pred HHHHhhhcCCcEEEEeCCCCC-CCH---HHHHHHHHH-HHhCCCCeEEcCCCCCHHHHHHHHhcCCCeEeecCCCCHHHH
Q 018508 98 LAEISGLAGYDFVVVDMEHGP-GGI---SDALACLHA-LAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAA 172 (355)
Q Consensus 98 ~~e~aa~~G~D~vilDlEh~~-~~~---~~a~~~i~a-~~~~g~~~iVRV~~~~~~~i~~aLdaGa~GImvP~Vesaeea 172 (355)
.++.+...|+|+|-++.-+.. ... .+....++. +...+.+++| + ..+..++++|+++|.+|...- ++
T Consensus 36 ~~~~~~~~G~~~i~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~v~v--~----~~~~~a~~~gad~v~l~~~~~--~~ 107 (227)
T 2tps_A 36 VVQKALKGGATLYQFREKGGDALTGEARIKFAEKAQAACREAGVPFIV--N----DDVELALNLKADGIHIGQEDA--NA 107 (227)
T ss_dssp HHHHHHHHTCSEEEECCCSTTCCCHHHHHHHHHHHHHHHHHHTCCEEE--E----SCHHHHHHHTCSEEEECTTSS--CH
T ss_pred HHHHHHHCCCCEEEEecCCCCHhHHHHHHHHHHHHHHHHHHcCCeEEE--c----CHHHHHHHcCCCEEEECCCcc--CH
Confidence 678888899999999976653 344 233333332 2344666776 2 235678899999999986542 23
Q ss_pred HHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEEccHHHHHHHHHHhccCCccEEEEChhhHHhh-c
Q 018508 173 KEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKRAEDIAAVDGVDCVQMGPLDLSAS-M 251 (355)
Q Consensus 173 ~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mIET~~av~nieeIaavpgVD~l~iGp~DLs~s-l 251 (355)
..+.+.. +. ..+.+-+.|++-+..+. ..|+|.|.+|+.-=+.. -
T Consensus 108 ~~~~~~~------------------------------g~-~~~~~s~~t~~e~~~a~----~~g~d~v~~~~v~~t~~~~ 152 (227)
T 2tps_A 108 KEVRAAI------------------------------GD-MILGVSAHTMSEVKQAE----EDGADYVGLGPIYPTETKK 152 (227)
T ss_dssp HHHHHHH------------------------------TT-SEEEEEECSHHHHHHHH----HHTCSEEEECCSSCCCSSS
T ss_pred HHHHHhc------------------------------CC-cEEEEecCCHHHHHHHH----hCCCCEEEECCCcCCCCCC
Confidence 2222211 01 23344456765433322 13799999876210000 0
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHhCCCce--eecccCCchhHHHHHHCCCCEEEecchH
Q 018508 252 GYLWDPGHRKVREMMRVAEKGVLGGGKAY--LAGFAMPHDAPLEMKSRGYHMVSGAVDV 308 (355)
Q Consensus 252 G~~~~~~~p~v~~ai~~iv~aa~a~g~~~--~g~~~~d~~~a~~~~~~G~~~vs~~~D~ 308 (355)
|. +.+...+ .+.++.... .++++ .||+ +++.+..+++.|++++.+++-+
T Consensus 153 ~~-~~~~~~~---~l~~~~~~~--~~~pvia~GGI--~~~nv~~~~~~Ga~gv~vgs~i 203 (227)
T 2tps_A 153 DT-RAVQGVS---LIEAVRRQG--ISIPIVGIGGI--TIDNAAPVIQAGADGVSMISAI 203 (227)
T ss_dssp SC-CCCCTTH---HHHHHHHTT--CCCCEEEESSC--CTTTSHHHHHTTCSEEEESHHH
T ss_pred CC-CCccCHH---HHHHHHHhC--CCCCEEEEcCC--CHHHHHHHHHcCCCEEEEhHHh
Confidence 00 1112222 233322221 12443 3444 3777888889999999999754
No 58
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=95.96 E-value=0.55 Score=44.14 Aligned_cols=168 Identities=16% Similarity=0.105 Sum_probs=96.9
Q ss_pred CHH-HHHHhhhcCCcEEEE-eCCCC-CCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHHHhcCCCeEeecC-CCCHH
Q 018508 95 SPT-LAEISGLAGYDFVVV-DMEHG-PGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPM-IDSPE 170 (355)
Q Consensus 95 sp~-~~e~aa~~G~D~vil-DlEh~-~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~aLdaGa~GImvP~-Vesae 170 (355)
+|. +++.....|+++|=+ +.++. ..+.+.++... ...+.|++.+=--.++.++..+..+||++|++-. .-+.+
T Consensus 80 dp~~~A~~y~~~GA~~IsVltd~~~f~Gs~~~L~~ir---~~v~lPVl~Kdfi~d~~qi~ea~~~GAD~VlLi~a~L~~~ 156 (272)
T 3tsm_A 80 DPPALAKAYEEGGAACLSVLTDTPSFQGAPEFLTAAR---QACSLPALRKDFLFDPYQVYEARSWGADCILIIMASVDDD 156 (272)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCSTTTCCCHHHHHHHH---HTSSSCEEEESCCCSTHHHHHHHHTTCSEEEEETTTSCHH
T ss_pred CHHHHHHHHHHCCCCEEEEeccccccCCCHHHHHHHH---HhcCCCEEECCccCCHHHHHHHHHcCCCEEEEcccccCHH
Confidence 444 566777899999744 43333 23444433222 2345666544333577889999999999977654 44678
Q ss_pred HHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEEccHHHHHHHHHHhccCCccEEEEChhhHHhh
Q 018508 171 AAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKRAEDIAAVDGVDCVQMGPLDLSAS 250 (355)
Q Consensus 171 ea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mIET~~av~nieeIaavpgVD~l~iGp~DLs~s 250 (355)
+++.+++.++.. | +.+++-+-|.+=++.+ ++ -|.|.|-++.-||..
T Consensus 157 ~l~~l~~~a~~l--G---------------------------l~~lvevh~~eEl~~A---~~-~ga~iIGinnr~l~t- 202 (272)
T 3tsm_A 157 LAKELEDTAFAL--G---------------------------MDALIEVHDEAEMERA---LK-LSSRLLGVNNRNLRS- 202 (272)
T ss_dssp HHHHHHHHHHHT--T---------------------------CEEEEEECSHHHHHHH---TT-SCCSEEEEECBCTTT-
T ss_pred HHHHHHHHHHHc--C---------------------------CeEEEEeCCHHHHHHH---Hh-cCCCEEEECCCCCcc-
Confidence 899998887632 1 2344444444333222 22 367877776656532
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHHHhCCCceeecc-cCCchhHHHHHHCCCCEEEecchH
Q 018508 251 MGYLWDPGHRKVREMMRVAEKGVLGGGKAYLAGF-AMPHDAPLEMKSRGYHMVSGAVDV 308 (355)
Q Consensus 251 lG~~~~~~~p~v~~ai~~iv~aa~a~g~~~~g~~-~~d~~~a~~~~~~G~~~vs~~~D~ 308 (355)
...+-... .+++.... .++..+..- -.++++++.+.+.|++.+.+|+-.
T Consensus 203 ----~~~dl~~~----~~L~~~ip-~~~~vIaesGI~t~edv~~l~~~Ga~gvLVG~al 252 (272)
T 3tsm_A 203 ----FEVNLAVS----ERLAKMAP-SDRLLVGESGIFTHEDCLRLEKSGIGTFLIGESL 252 (272)
T ss_dssp ----CCBCTHHH----HHHHHHSC-TTSEEEEESSCCSHHHHHHHHTTTCCEEEECHHH
T ss_pred ----CCCChHHH----HHHHHhCC-CCCcEEEECCCCCHHHHHHHHHcCCCEEEEcHHH
Confidence 12222222 22322222 233332222 236899999999999999999654
No 59
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=95.92 E-value=0.016 Score=53.63 Aligned_cols=190 Identities=12% Similarity=0.046 Sum_probs=107.2
Q ss_pred HHHHhhhcCCcEEEEeCCCCCC--CHHHHHHHHHHHHh-C--CCCeEEcCCCCCHHHHHHHHhcCCCeEeecCCCCHHHH
Q 018508 98 LAEISGLAGYDFVVVDMEHGPG--GISDALACLHALAA-T--GTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAA 172 (355)
Q Consensus 98 ~~e~aa~~G~D~vilDlEh~~~--~~~~a~~~i~a~~~-~--g~~~iVRV~~~~~~~i~~aLdaGa~GImvP~Vesaeea 172 (355)
.++.+...|+|++=+|.-|+.+ ...---..+++++. . ....+|. .+ ..++..+.++||++|.|+--.+ +++
T Consensus 31 ~i~~~~~~gad~lhvDvmDG~fvpn~t~G~~~v~~lr~~~~~DvhLMv~--~p-~~~i~~~~~aGAd~itvH~ea~-~~~ 106 (237)
T 3cu2_A 31 EVTTLLENQINVLHFDIADGQFSSLFTVGAIGIKYFPTHCFKDVHLMVR--NQ-LEVAKAVVANGANLVTLQLEQY-HDF 106 (237)
T ss_dssp HHHHHHHTTCCEEEEEEEBSSSSSCBCBCTHHHHTSCTTSEEEEEEECS--CH-HHHHHHHHHTTCSEEEEETTCT-TSH
T ss_pred HHHHHHHcCCCEEEEEEecCccccchhhhHHHHHHHhhhCCCCeEEEEE--CH-HHHHHHHHHcCCCEEEEecCCc-ccH
Confidence 4567778899999899877632 11100122332221 1 2233333 21 3468889999999998875444 667
Q ss_pred HHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEE--ccHHHHHHHHHHhccCCccEEEE---ChhhH
Q 018508 173 KEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQV--ESEEGVKRAEDIAAVDGVDCVQM---GPLDL 247 (355)
Q Consensus 173 ~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mI--ET~~av~nieeIaavpgVD~l~i---Gp~DL 247 (355)
..+++.++.... .|. +......+++-+ +|+ ++.+++++. ++|.|.+ +|
T Consensus 107 ~~~i~~i~~~~~-------------------~~~-~~~~g~~~gv~l~p~Tp--~~~l~~~l~--~~D~vlvMsv~p--- 159 (237)
T 3cu2_A 107 ALTIEWLAKQKT-------------------TYA-NQVYPVLIGACLCPETP--ISELEPYLD--QIDVIQLLTLDP--- 159 (237)
T ss_dssp HHHHHHHTTCEE-------------------EET-TEEEECEEEEEECTTSC--GGGGTTTTT--TCSEEEEESEET---
T ss_pred HHHHHHHHhccc-------------------ccc-cccCCceEEEEEeCCCh--HHHHHHHhh--cCceeeeeeecc---
Confidence 788888763200 000 000112455555 565 556666654 7898866 44
Q ss_pred HhhcCCCCCCCCHHHHHHHHHHHHHHHhCC--CceeecccCCchhHHHHHH--CCCCEEEecchHHHHHHHHHHHHHHHH
Q 018508 248 SASMGYLWDPGHRKVREMMRVAEKGVLGGG--KAYLAGFAMPHDAPLEMKS--RGYHMVSGAVDVGLFRSAAVEDVARFK 323 (355)
Q Consensus 248 s~slG~~~~~~~p~v~~ai~~iv~aa~a~g--~~~~g~~~~d~~~a~~~~~--~G~~~vs~~~D~~ll~~~~~~~~~~~r 323 (355)
|..++...|...+-++++.+...++| ..+...-.-+.+.+..+++ .|.+.+++|+-+. ..-..+.++.+|
T Consensus 160 ----gfggq~f~~~~l~ki~~lr~~~~~~~~~~~I~vdGGI~~~~~~~~~~~~aGad~~VvGSaIf--~~d~~~~~~~l~ 233 (237)
T 3cu2_A 160 ----RNGTKYPSELILDRVIQVEKRLGNRRVEKLINIDGSMTLELAKYFKQGTHQIDWLVSGSALF--SGELKTNLKVWK 233 (237)
T ss_dssp ----TTTEECCHHHHHHHHHHHHHHHGGGGGGCEEEEESSCCHHHHHHHHHSSSCCCCEEECGGGG--SSCHHHHHHHHH
T ss_pred ----CcCCeecChhHHHHHHHHHHHHHhcCCCceEEEECCcCHHHHHHHHHhCCCCcEEEEeeHHh--CCCHHHHHHHHH
Confidence 34455555666666766666554433 2221111235678889999 9999999996542 212344555555
Q ss_pred H
Q 018508 324 M 324 (355)
Q Consensus 324 ~ 324 (355)
.
T Consensus 234 ~ 234 (237)
T 3cu2_A 234 S 234 (237)
T ss_dssp H
T ss_pred H
Confidence 4
No 60
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=95.82 E-value=0.2 Score=44.10 Aligned_cols=94 Identities=10% Similarity=0.051 Sum_probs=61.1
Q ss_pred CCcEEEEEEecCCHHH-HHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcC-CCCCH-HHHHHHHhcCCC
Q 018508 83 NETLYGLFLLSFSPTL-AEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRL-PESCP-TWAKKALDLGPQ 159 (355)
Q Consensus 83 G~~~~gl~v~~~sp~~-~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV-~~~~~-~~i~~aLdaGa~ 159 (355)
+.|++.-..-...++. ++.+..+|+|+|++-.+. ..+.....+..++..|..++|-+ +..++ ..++.+++.|++
T Consensus 53 ~~~i~~~~~~~~~~~~~~~~~~~~Gad~v~v~~~~---~~~~~~~~~~~~~~~g~~~~v~~~~~~t~~~~~~~~~~~g~d 129 (211)
T 3f4w_A 53 HKEVLADAKIMDGGHFESQLLFDAGADYVTVLGVT---DVLTIQSCIRAAKEAGKQVVVDMICVDDLPARVRLLEEAGAD 129 (211)
T ss_dssp TSEEEEEEEECSCHHHHHHHHHHTTCSEEEEETTS---CHHHHHHHHHHHHHHTCEEEEECTTCSSHHHHHHHHHHHTCC
T ss_pred CCEEEEEEEeccchHHHHHHHHhcCCCEEEEeCCC---ChhHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHcCCC
Confidence 4455444444455555 899999999999995553 34556667777776787777653 33333 568889999999
Q ss_pred eEee-cC-------CCCHHHHHHHHHHc
Q 018508 160 GVMF-PM-------IDSPEAAKEAVSYC 179 (355)
Q Consensus 160 GImv-P~-------Vesaeea~~vv~a~ 179 (355)
.|.+ |. ..+.+.++++.+.+
T Consensus 130 ~i~v~~g~~g~~~~~~~~~~i~~l~~~~ 157 (211)
T 3f4w_A 130 MLAVHTGTDQQAAGRKPIDDLITMLKVR 157 (211)
T ss_dssp EEEEECCHHHHHTTCCSHHHHHHHHHHC
T ss_pred EEEEcCCCcccccCCCCHHHHHHHHHHc
Confidence 8765 22 12456666666554
No 61
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=95.76 E-value=1.5 Score=42.00 Aligned_cols=212 Identities=13% Similarity=0.130 Sum_probs=122.8
Q ss_pred CCchHHHHHHHcC-CcEEEEEEecCCHHHHHHhhhcCCcEEEE--e--------CCCC-CCCHHHHHHHHHHHHh-C--C
Q 018508 71 PSPESLKYRLQSN-ETLYGLFLLSFSPTLAEISGLAGYDFVVV--D--------MEHG-PGGISDALACLHALAA-T--G 135 (355)
Q Consensus 71 ~~~n~lk~~L~~G-~~~~gl~v~~~sp~~~e~aa~~G~D~vil--D--------lEh~-~~~~~~a~~~i~a~~~-~--g 135 (355)
....+||++|.++ ++++. .+.-+...+.++..+|||.|++ | ..|. +.+.+++...++.+.. . .
T Consensus 11 ~~a~~lr~ll~~~~~~i~~--~~a~D~~sA~l~e~aGf~ai~vsG~~~a~s~~G~pD~~~vt~~em~~~~~~i~r~~~~~ 88 (307)
T 3lye_A 11 SGAKKLRHLLENTDELIVC--PGVYDGLSARTAMELGFKSLYMTGAGTTASRLGQPDLAIAQLHDMRDNADMIANLDPFG 88 (307)
T ss_dssp CHHHHHHHHHHHCCCCEEE--EEECSHHHHHHHHHTTCSCEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHTSSTTS
T ss_pred hHHHHHHHHHhCCCCeEEE--ecCcCHHHHHHHHHcCCCEEEeccHHHHHHhcCCCCCCCCCHHHHHHHHHhhhccCCCC
Confidence 3457899999875 55422 2445888888888999999998 3 1222 3566776666666543 3 3
Q ss_pred CCeEEcCCCC--CHH----HHHHHHhcCCCeEee-----cC---------CCCHHH-HHHHHHHcCCCCCCCCCCccccc
Q 018508 136 TPAILRLPES--CPT----WAKKALDLGPQGVMF-----PM---------IDSPEA-AKEAVSYCRFPPSGVRGSAHTVV 194 (355)
Q Consensus 136 ~~~iVRV~~~--~~~----~i~~aLdaGa~GImv-----P~---------Vesaee-a~~vv~a~~~pP~G~Rg~g~~~~ 194 (355)
.+++|=.+.. ++. .++++.++|+.||.+ |+ +-+.++ ++++..+..-
T Consensus 89 ~PviaD~d~Gyg~~~~v~~~v~~l~~aGaagv~iEDq~~~k~cgh~~gk~l~~~~e~~~rI~Aa~~A------------- 155 (307)
T 3lye_A 89 PPLIADMDTGYGGPIMVARTVEHYIRSGVAGAHLEDQILTKRCGHLSGKKVVSRDEYLVRIRAAVAT------------- 155 (307)
T ss_dssp CCEEEECTTCSSSHHHHHHHHHHHHHTTCCEEEECCBCCCC--------CBCCHHHHHHHHHHHHHH-------------
T ss_pred CcEEEECCCCCCCHHHHHHHHHHHHHcCCeEEEEcCCCCCcccCCCCCCeecCHHHHHHHHHHHHHH-------------
Confidence 6777766654 332 356778899987754 32 123333 2333222210
Q ss_pred ccccCCCCccccccCCCceEEEEEEccH------HHHHHHHHHhccCCccEEEE-ChhhHHhhcCCCCCCCCHHHHHHHH
Q 018508 195 RASGYGIDEGYLSNYEEELLIMCQVESE------EGVKRAEDIAAVDGVDCVQM-GPLDLSASMGYLWDPGHRKVREMMR 267 (355)
Q Consensus 195 ra~~~g~~~~y~~~~n~~i~vi~mIET~------~av~nieeIaavpgVD~l~i-Gp~DLs~slG~~~~~~~p~v~~ai~ 267 (355)
| ...+..+.|++=.|+. ++++.+....+ .|.|+||+ |.. .++ .++
T Consensus 156 ~-----------~~~~~d~~I~ARTDa~~~~gldeAi~Ra~ay~e-AGAD~ifi~~~~-------------~~~---~~~ 207 (307)
T 3lye_A 156 K-----------RRLRSDFVLIARTDALQSLGYEECIERLRAARD-EGADVGLLEGFR-------------SKE---QAA 207 (307)
T ss_dssp H-----------HHTTCCCEEEEEECCHHHHCHHHHHHHHHHHHH-TTCSEEEECCCS-------------CHH---HHH
T ss_pred H-----------HhcCCCeEEEEechhhhccCHHHHHHHHHHHHH-CCCCEEEecCCC-------------CHH---HHH
Confidence 0 0012357788888886 56666666554 48999997 321 122 233
Q ss_pred HHHHHHHhCCCceeec-c--cCCc-hhHHHHHHCCCCEEEecchHH-HHHHHHHHHHHHHHHhcC
Q 018508 268 VAEKGVLGGGKAYLAG-F--AMPH-DAPLEMKSRGYHMVSGAVDVG-LFRSAAVEDVARFKMNLT 327 (355)
Q Consensus 268 ~iv~aa~a~g~~~~g~-~--~~d~-~~a~~~~~~G~~~vs~~~D~~-ll~~~~~~~~~~~r~~~~ 327 (355)
+++++.. +++.... + ...| -...++.++||+.++++.-.. ....++++.+..++....
T Consensus 208 ~i~~~~~--~~Pv~~n~~~~g~~p~~t~~eL~~lGv~~v~~~~~~~raa~~a~~~~~~~l~~~g~ 270 (307)
T 3lye_A 208 AAVAALA--PWPLLLNSVENGHSPLITVEEAKAMGFRIMIFSFATLAPAYAAIRETLVRLRDHGV 270 (307)
T ss_dssp HHHHHHT--TSCBEEEEETTSSSCCCCHHHHHHHTCSEEEEETTTHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHcc--CCceeEEeecCCCCCCCCHHHHHHcCCeEEEEChHHHHHHHHHHHHHHHHHHHhCC
Confidence 4444432 3343221 1 1122 246788999999998887543 345566666666666543
No 62
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=95.52 E-value=0.77 Score=41.32 Aligned_cols=82 Identities=21% Similarity=0.109 Sum_probs=52.4
Q ss_pred HHHHHhhhcCCcEEEE-eCCCCCCCHHHHHHHHHHHHh-CCCCeEEcCCCC-CHHHHHHHHhcCCCeEeecC--CCCHHH
Q 018508 97 TLAEISGLAGYDFVVV-DMEHGPGGISDALACLHALAA-TGTPAILRLPES-CPTWAKKALDLGPQGVMFPM--IDSPEA 171 (355)
Q Consensus 97 ~~~e~aa~~G~D~vil-DlEh~~~~~~~a~~~i~a~~~-~g~~~iVRV~~~-~~~~i~~aLdaGa~GImvP~--Vesaee 171 (355)
+.++.+...|+|+|.+ |............+.++.+.. .+.++++ .... +...+..++..|+++|+++. .+.++.
T Consensus 35 ~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~~~iPvi~-~Ggi~~~~~~~~~~~~Gad~V~lg~~~l~~p~~ 113 (252)
T 1ka9_F 35 EAARAYDEAGADELVFLDISATHEERAILLDVVARVAERVFIPLTV-GGGVRSLEDARKLLLSGADKVSVNSAAVRRPEL 113 (252)
T ss_dssp HHHHHHHHHTCSCEEEEECCSSTTCHHHHHHHHHHHHTTCCSCEEE-ESSCCSHHHHHHHHHHTCSEEEECHHHHHCTHH
T ss_pred HHHHHHHHcCCCEEEEEcCCccccCccccHHHHHHHHHhCCCCEEE-ECCcCCHHHHHHHHHcCCCEEEEChHHHhCcHH
Confidence 4667788899997544 766432333333445555543 4555554 2222 46789999999999999976 456666
Q ss_pred HHHHHHHc
Q 018508 172 AKEAVSYC 179 (355)
Q Consensus 172 a~~vv~a~ 179 (355)
++++.+..
T Consensus 114 ~~~~~~~~ 121 (252)
T 1ka9_F 114 IRELADHF 121 (252)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHc
Confidence 77776654
No 63
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=95.49 E-value=0.12 Score=50.35 Aligned_cols=79 Identities=19% Similarity=0.216 Sum_probs=56.5
Q ss_pred cCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHh-CCCCeEEcCCCCCHHHHHHHHhcCCCe
Q 018508 82 SNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAA-TGTPAILRLPESCPTWAKKALDLGPQG 160 (355)
Q Consensus 82 ~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~-~g~~~iVRV~~~~~~~i~~aLdaGa~G 160 (355)
.++..++.-+.....+.++.+...|+|+|.||..|+.. +...+.++.++. .+.++++- +-.....++++.++|+++
T Consensus 93 ~~~~pvga~ig~~~~e~a~~l~eaGad~I~ld~a~G~~--~~~~~~i~~i~~~~~~~Vivg-~v~t~e~A~~l~~aGaD~ 169 (361)
T 3khj_A 93 SGGLRVGAAIGVNEIERAKLLVEAGVDVIVLDSAHGHS--LNIIRTLKEIKSKMNIDVIVG-NVVTEEATKELIENGADG 169 (361)
T ss_dssp TTCCCCEEEECTTCHHHHHHHHHTTCSEEEECCSCCSB--HHHHHHHHHHHHHCCCEEEEE-EECSHHHHHHHHHTTCSE
T ss_pred ccCceEEEEeCCCHHHHHHHHHHcCcCeEEEeCCCCCc--HHHHHHHHHHHHhcCCcEEEc-cCCCHHHHHHHHHcCcCE
Confidence 35555666666666788999999999999999999732 334445554432 36666652 224577889999999999
Q ss_pred Eee
Q 018508 161 VMF 163 (355)
Q Consensus 161 Imv 163 (355)
|.+
T Consensus 170 I~V 172 (361)
T 3khj_A 170 IKV 172 (361)
T ss_dssp EEE
T ss_pred EEE
Confidence 998
No 64
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=95.21 E-value=0.19 Score=49.88 Aligned_cols=78 Identities=18% Similarity=0.215 Sum_probs=56.3
Q ss_pred CCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHh-CCCCeEEcCCCCCHHHHHHHHhcCCCeE
Q 018508 83 NETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAA-TGTPAILRLPESCPTWAKKALDLGPQGV 161 (355)
Q Consensus 83 G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~-~g~~~iVRV~~~~~~~i~~aLdaGa~GI 161 (355)
|.-.++.-+...+.+.++.+...|+|+|+||..|+.. +...+.++.++. .+.++++- +-.....++++.++|+++|
T Consensus 133 g~l~v~~~v~~~~~e~~~~lveaGvdvIvldta~G~~--~~~~e~I~~ik~~~~i~Vi~g-~V~t~e~A~~a~~aGAD~I 209 (400)
T 3ffs_A 133 GRLRVGAAIGVNEIERAKLLVEAGVDVIVLDSAHGHS--LNIIRTLKEIKSKMNIDVIVG-NVVTEEATKELIENGADGI 209 (400)
T ss_dssp SSBCCEEEECCC-CHHHHHHHHHTCSEEEECCSCCSB--HHHHHHHHHHHTTCCCEEEEE-EECSHHHHHHHHHTTCSEE
T ss_pred cceeEEeecCCCHHHHHHHHHHcCCCEEEEeCCCCCc--ccHHHHHHHHHhcCCCeEEEe-ecCCHHHHHHHHHcCCCEE
Confidence 4445666666666788999999999999999998732 344555665544 36666652 2245778899999999999
Q ss_pred ee
Q 018508 162 MF 163 (355)
Q Consensus 162 mv 163 (355)
.+
T Consensus 210 ~v 211 (400)
T 3ffs_A 210 KV 211 (400)
T ss_dssp EE
T ss_pred EE
Confidence 98
No 65
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=95.01 E-value=0.44 Score=43.45 Aligned_cols=78 Identities=12% Similarity=-0.016 Sum_probs=55.2
Q ss_pred CCcEEEEEEe---------cCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHH
Q 018508 83 NETLYGLFLL---------SFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKA 153 (355)
Q Consensus 83 G~~~~gl~v~---------~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~a 153 (355)
+.|++|.+-. .+..+.++.+...|+|+|++|.-+.... +...++++.++..+..+++=+. +...++++
T Consensus 69 ~~Pvig~~k~d~~~~~~~I~~~~~~i~~~~~~Gad~V~l~~~~~~~p-~~l~~~i~~~~~~g~~v~~~v~--t~eea~~a 145 (232)
T 3igs_A 69 SVPIIGIIKRDLDESPVRITPFLDDVDALAQAGAAIIAVDGTARQRP-VAVEALLARIHHHHLLTMADCS--SVDDGLAC 145 (232)
T ss_dssp CSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEEEEECCSSCCS-SCHHHHHHHHHHTTCEEEEECC--SHHHHHHH
T ss_pred CCCEEEEEeecCCCcceEeCccHHHHHHHHHcCCCEEEECccccCCH-HHHHHHHHHHHHCCCEEEEeCC--CHHHHHHH
Confidence 5788886532 1344567888999999999999864211 3455566666666888887654 46778899
Q ss_pred HhcCCCeEee
Q 018508 154 LDLGPQGVMF 163 (355)
Q Consensus 154 LdaGa~GImv 163 (355)
.+.|++.|.+
T Consensus 146 ~~~Gad~Ig~ 155 (232)
T 3igs_A 146 QRLGADIIGT 155 (232)
T ss_dssp HHTTCSEEEC
T ss_pred HhCCCCEEEE
Confidence 9999998854
No 66
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=95.00 E-value=2.3 Score=39.50 Aligned_cols=204 Identities=11% Similarity=0.094 Sum_probs=115.3
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeC-----CCC-----CCCHHHHHHHHHHH-HhCCCCeEEcC
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDM-----EHG-----PGGISDALACLHAL-AATGTPAILRL 142 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDl-----Eh~-----~~~~~~a~~~i~a~-~~~g~~~iVRV 142 (355)
..||++++.|++.+ ..+..+...+..+..+|||.|++-- -++ +.+.+++...++++ +....++++=.
T Consensus 10 ~~lr~l~~~~~~i~--~~~ayD~~sA~~~~~aG~dai~vg~~s~a~~~G~pD~~~vt~~em~~~~~~I~r~~~~pviaD~ 87 (255)
T 2qiw_A 10 TKFASDHESGKLLV--LPTVWDTWSAGLVEEAGFSGLTIGSHPVADATGSSDGENMNFADYMAVVKKITSAVSIPVSVDV 87 (255)
T ss_dssp HHHHHHHHTCCCEE--CCEESSHHHHHHHHHTTCSCEEECHHHHHHHTTCCTTTCSCHHHHHHHHHHHHHHCSSCEEEEC
T ss_pred HHHHHHHhCCCcEE--EecCcCHHHHHHHHHcCCCEEEEChHHHHHhCCCCCCCCcCHHHHHHHHHHHHhcCCCCEEecc
Confidence 46899999898854 3456688888888899999998851 223 35677776666654 34567777766
Q ss_pred CCC---C-HHHHHHHHhcCCCeEeecCC--------CCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCC
Q 018508 143 PES---C-PTWAKKALDLGPQGVMFPMI--------DSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYE 210 (355)
Q Consensus 143 ~~~---~-~~~i~~aLdaGa~GImvP~V--------esaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n 210 (355)
+.. . ...+++++++|+.||.+=-- -+.++...-+++++.. .+.. .
T Consensus 88 ~~Gyg~~~~~~~~~l~~aGa~gv~iEd~~~~~~k~l~~~~e~~~~I~a~~~a---~~~~--------------------g 144 (255)
T 2qiw_A 88 ESGYGLSPADLIAQILEAGAVGINVEDVVHSEGKRVREAQEHADYIAAARQA---ADVA--------------------G 144 (255)
T ss_dssp TTCTTCCHHHHHHHHHHTTCCEEEECSEEGGGTTEECCHHHHHHHHHHHHHH---HHHH--------------------T
T ss_pred CCCcCcHHHHHHHHHHHcCCcEEEECCCCCCCCCcccCHHHHHHHHHHHHHH---HHhc--------------------C
Confidence 654 1 23467888999988865211 1223332222222210 0000 0
Q ss_pred CceEEEEEEcc------------HHHHHHHHHHhccCCccEEEEChhhHHhhcCCCCCCCCHHHHHHHHHHHHHHHhCCC
Q 018508 211 EELLIMCQVES------------EEGVKRAEDIAAVDGVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVAEKGVLGGGK 278 (355)
Q Consensus 211 ~~i~vi~mIET------------~~av~nieeIaavpgVD~l~iGp~DLs~slG~~~~~~~p~v~~ai~~iv~aa~a~g~ 278 (355)
....|++-++. .++++.+....+ -|.|+||+=. . ..++. ++++.+ +-.+
T Consensus 145 ~~~~v~aRtd~~~~g~~~~~~~~~~ai~ra~a~~e-AGAd~i~~e~--------~----~~~~~---~~~i~~---~~~~ 205 (255)
T 2qiw_A 145 VDVVINGRTDAVKLGADVFEDPMVEAIKRIKLMEQ-AGARSVYPVG--------L----STAEQ---VERLVD---AVSV 205 (255)
T ss_dssp CCCEEEEEECHHHHCTTTSSSHHHHHHHHHHHHHH-HTCSEEEECC--------C----CSHHH---HHHHHT---TCSS
T ss_pred CCeEEEEEechhhccCCcchHHHHHHHHHHHHHHH-cCCcEEEEcC--------C----CCHHH---HHHHHH---hCCC
Confidence 12355566654 355556655554 2899998811 1 11222 222222 2223
Q ss_pred ceeecccCC---c-hhHHHHHHCCCCEEEecchHHHHHHHHHHHHHHHHH
Q 018508 279 AYLAGFAMP---H-DAPLEMKSRGYHMVSGAVDVGLFRSAAVEDVARFKM 324 (355)
Q Consensus 279 ~~~g~~~~d---~-~~a~~~~~~G~~~vs~~~D~~ll~~~~~~~~~~~r~ 324 (355)
+........ | -...++.++||+.+++++- ...++++.+..++.
T Consensus 206 P~n~~~~~~~~~p~~~~~eL~~lGv~~v~~~~~---a~~a~~~~~~~i~~ 252 (255)
T 2qiw_A 206 PVNITAHPVDGHGAGDLATLAGLGVRRVTFGPL---WQKWLAATSAQQLK 252 (255)
T ss_dssp CBEEECBTTTBBTTBCHHHHHHTTCCEEECTTH---HHHHHHHHHHHHHG
T ss_pred CEEEEecCCCCCCCCCHHHHHHcCCCEEEEHHH---HHHHHHHHHHHHHh
Confidence 321111111 1 3467899999999999988 55566666665554
No 67
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=94.96 E-value=2.6 Score=39.98 Aligned_cols=208 Identities=18% Similarity=0.169 Sum_probs=114.7
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEe-C----CCC-----CCCHHHHHHHHHHH-HhCCCCeEEcC
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVD-M----EHG-----PGGISDALACLHAL-AATGTPAILRL 142 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilD-l----Eh~-----~~~~~~a~~~i~a~-~~~g~~~iVRV 142 (355)
..||++++.|++++ ..+.-++..+.++..+|||.|++- . -++ +.+.+++.+.++.+ +....+++|=.
T Consensus 9 ~~lr~l~~~~~~i~--~~~a~D~~sA~~~~~aG~~ai~vsg~~~a~~lG~pD~~~vt~~em~~~~~~I~~~~~~PviaD~ 86 (295)
T 1s2w_A 9 TQLKQMLNSKDLEF--IMEAHNGLSARIVQEAGFKGIWGSGLSVSAQLGVRDSNEASWTQVVEVLEFMSDASDVPILLDA 86 (295)
T ss_dssp HHHHHHHHSSSCEE--EEEECSHHHHHHHHHHTCSCEEECCHHHHHTC---------CHHHHHHHHHHHHTCSSCEEEEC
T ss_pred HHHHHHHhCCCcEE--EecCCCHHHHHHHHHcCCCEEEeChHHHHHhCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEecC
Confidence 57999999998754 345668888888888999999986 1 233 12344444445444 34567777776
Q ss_pred CCC--CHH----HHHHHHhcCCCeEee-----cCC-----------CCHHH-HHHHHHHcCCCCCCCCCCcccccccccC
Q 018508 143 PES--CPT----WAKKALDLGPQGVMF-----PMI-----------DSPEA-AKEAVSYCRFPPSGVRGSAHTVVRASGY 199 (355)
Q Consensus 143 ~~~--~~~----~i~~aLdaGa~GImv-----P~V-----------esaee-a~~vv~a~~~pP~G~Rg~g~~~~ra~~~ 199 (355)
+.. ++. .++++.++|+.||.+ |++ -+.++ +.++..+..-. +
T Consensus 87 d~Gyg~~~~v~~~v~~l~~aGaagv~iED~~~~k~cgH~gg~~k~l~p~~e~~~rI~Aa~~a~----~------------ 150 (295)
T 1s2w_A 87 DTGYGNFNNARRLVRKLEDRGVAGACLEDKLFPKTNSLHDGRAQPLADIEEFALKIKACKDSQ----T------------ 150 (295)
T ss_dssp CSSCSSHHHHHHHHHHHHHTTCCEEEEECBCC--------CTTCCBCCHHHHHHHHHHHHHHC----S------------
T ss_pred CCCCCCHHHHHHHHHHHHHcCCcEEEECCCCCCccccccCCCCCcccCHHHHHHHHHHHHHhc----c------------
Confidence 644 232 357788899987764 221 12222 33322222100 0
Q ss_pred CCCccccccCCCceEEEEEEcc-------HHHHHHHHHHhccCCccEEEEChhhHHhhcCCCCCCCCHHHHHHHHHHHHH
Q 018508 200 GIDEGYLSNYEEELLIMCQVES-------EEGVKRAEDIAAVDGVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVAEKG 272 (355)
Q Consensus 200 g~~~~y~~~~n~~i~vi~mIET-------~~av~nieeIaavpgVD~l~iGp~DLs~slG~~~~~~~p~v~~ai~~iv~a 272 (355)
.....|++-.|. .++++.+....+. |.|+||+=+ +. ++.++ +.++.++
T Consensus 151 ----------~~~~~i~aRtda~~a~~g~~~ai~Ra~ay~eA-GAd~i~~e~-------~~---~~~~~----~~~i~~~ 205 (295)
T 1s2w_A 151 ----------DPDFCIVARVEAFIAGWGLDEALKRAEAYRNA-GADAILMHS-------KK---ADPSD----IEAFMKA 205 (295)
T ss_dssp ----------STTCEEEEEECTTTTTCCHHHHHHHHHHHHHT-TCSEEEECC-------CS---SSSHH----HHHHHHH
T ss_pred ----------cCCcEEEEeehHHhccccHHHHHHHHHHHHHc-CCCEEEEcC-------CC---CCHHH----HHHHHHH
Confidence 123456666654 4677777777753 899999831 01 11122 2333333
Q ss_pred HHhCCCceeecccC-CchhHHHHHHCCCCEEEecchHH-HHHHHHHHHHHHHHHh
Q 018508 273 VLGGGKAYLAGFAM-PHDAPLEMKSRGYHMVSGAVDVG-LFRSAAVEDVARFKMN 325 (355)
Q Consensus 273 a~a~g~~~~g~~~~-d~~~a~~~~~~G~~~vs~~~D~~-ll~~~~~~~~~~~r~~ 325 (355)
.. ..++.+..+.. ..-...++.++||+.++++.-.. ....++.+.+..++..
T Consensus 206 ~~-~~~P~i~~~~~~~~~~~~eL~~lGv~~v~~~~~~~raa~~a~~~~~~~i~~~ 259 (295)
T 1s2w_A 206 WN-NQGPVVIVPTKYYKTPTDHFRDMGVSMVIWANHNLRASVSAIQQTTKQIYDD 259 (295)
T ss_dssp HT-TCSCEEECCSTTTTSCHHHHHHHTCCEEEECSHHHHHHHHHHHHHHHHHHHH
T ss_pred cC-CCCCEEEeCCCCCCCCHHHHHHcCCcEEEEChHHHHHHHHHHHHHHHHHHHc
Confidence 32 11333222211 11237788999999999997653 2334444455555553
No 68
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=94.96 E-value=1.7 Score=44.54 Aligned_cols=180 Identities=16% Similarity=0.083 Sum_probs=105.7
Q ss_pred HHHHHhhhcCCcEEEEeCCCCCCC--HHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHHHhcCCCeEeecCCCC-HHHHH
Q 018508 97 TLAEISGLAGYDFVVVDMEHGPGG--ISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDS-PEAAK 173 (355)
Q Consensus 97 ~~~e~aa~~G~D~vilDlEh~~~~--~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~aLdaGa~GImvP~Ves-aeea~ 173 (355)
+.++.+...|.++|-|..-+.... .+.++.+...++.++.+.+| |+ .+.-++..|++||=++.-+- ..+++
T Consensus 29 ~~ve~al~~Gv~~vQlR~K~~~~~~~~~~a~~l~~l~~~~~v~liI--ND----~~dlA~~~gAdGVHLgq~dl~~~~ar 102 (540)
T 3nl6_A 29 GQVEAGLQNGVTLVQIREKDADTKFFIEEALQIKELCHAHNVPLII--ND----RIDVAMAIGADGIHVGQDDMPIPMIR 102 (540)
T ss_dssp HHHHHHHHTTCSEEEECCSSSCTTHHHHHHHHHHHHHHHTTCCEEE--CS----CSHHHHHTTCSEEEECTTSSCHHHHH
T ss_pred HHHHHHHHCCCCEEEEecCCCCHHHHHHHHHHHHHHHHhcCCEEEE--eC----cHHHHHHcCCCEEEEChhhcCHHHHH
Confidence 457788888999999988877543 22344444455677888775 44 24457789999999987653 34444
Q ss_pred HHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEEccHHHHHHHHHHhccCC---ccEEEEChhhHHhh
Q 018508 174 EAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKRAEDIAAVDG---VDCVQMGPLDLSAS 250 (355)
Q Consensus 174 ~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mIET~~av~nieeIaavpg---VD~l~iGp~DLs~s 250 (355)
++. . ....+++-+-|++-+..+.+ .| +|.|.+||---+.+
T Consensus 103 ~~l-----g----------------------------~~~iiG~S~ht~eea~~A~~----~G~~~aDYv~~Gpvf~T~t 145 (540)
T 3nl6_A 103 KLV-----G----------------------------PDMVIGWSVGFPEEVDELSK----MGPDMVDYIGVGTLFPTLT 145 (540)
T ss_dssp HHH-----C----------------------------TTSEEEEEECSHHHHHHHHH----TCC--CCEEEESCCSCCCC
T ss_pred HHh-----C----------------------------CCCEEEEECCCHHHHHHHHH----cCCCCCCEEEEcCCCCCCC
Confidence 432 1 12357777878766554443 36 89999998621110
Q ss_pred cCCCCCCC-CHHHHHHHHHHHHHHHhC---CCc--eeecccCCchhHHHHHH--------CCCCEEEecchHHH---HHH
Q 018508 251 MGYLWDPG-HRKVREMMRVAEKGVLGG---GKA--YLAGFAMPHDAPLEMKS--------RGYHMVSGAVDVGL---FRS 313 (355)
Q Consensus 251 lG~~~~~~-~p~v~~ai~~iv~aa~a~---g~~--~~g~~~~d~~~a~~~~~--------~G~~~vs~~~D~~l---l~~ 313 (355)
-+. .. .|.-.+.++++.+.+++. .++ .+||+ +++.+..+++ .|++++++.+.+.- ..+
T Consensus 146 --K~~-~~~~~~G~~~l~~i~~~~~~~~~~~iPvvAIGGI--~~~ni~~v~~~~~~~g~~~GadgvAVvsaI~~a~dp~~ 220 (540)
T 3nl6_A 146 --KKN-PKKAPMGTAGAIRVLDALERNNAHWCRTVGIGGL--HPDNIERVLYQCVSSNGKRSLDGICVVSDIIASLDAAK 220 (540)
T ss_dssp --CC-----CCCHHHHHHHHHHHHHHTTCTTCEEEEESSC--CTTTHHHHHHHCBCTTSSCBCSCEEESHHHHTCTTHHH
T ss_pred --CCC-cCCCCCCHHHHHHHHHHHHhhccCCCCEEEEcCC--CHHHHHHHHHhhcccccccCceEEEEeHHHhcCCCHHH
Confidence 000 00 001133444555544332 344 35555 5677888876 89999999987642 334
Q ss_pred HHHHHHHHHHH
Q 018508 314 AAVEDVARFKM 324 (355)
Q Consensus 314 ~~~~~~~~~r~ 324 (355)
++++..+.++.
T Consensus 221 a~~~l~~~~~~ 231 (540)
T 3nl6_A 221 STKILRGLIDK 231 (540)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHHh
Confidence 44444444444
No 69
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=94.83 E-value=0.4 Score=43.68 Aligned_cols=78 Identities=13% Similarity=0.035 Sum_probs=55.5
Q ss_pred CCcEEEEEEe---------cCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHH
Q 018508 83 NETLYGLFLL---------SFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKA 153 (355)
Q Consensus 83 G~~~~gl~v~---------~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~a 153 (355)
+.|++|++-. .+..+.++.+...|+|+|++|.-+.... +...++++.++..+..+++=+. +...++++
T Consensus 69 ~~Pvig~~k~~~~~~~~~I~~~~~~i~~~~~aGad~I~l~~~~~~~p-~~l~~~i~~~~~~g~~v~~~v~--t~eea~~a 145 (229)
T 3q58_A 69 SVPIIGIIKRDLTGSPVRITPYLQDVDALAQAGADIIAFDASFRSRP-VDIDSLLTRIRLHGLLAMADCS--TVNEGISC 145 (229)
T ss_dssp CSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEEEEECCSSCCS-SCHHHHHHHHHHTTCEEEEECS--SHHHHHHH
T ss_pred CCCEEEEEeecCCCCceEeCccHHHHHHHHHcCCCEEEECccccCCh-HHHHHHHHHHHHCCCEEEEecC--CHHHHHHH
Confidence 5788887642 1334467888899999999999864211 3455566666666888887654 46778899
Q ss_pred HhcCCCeEee
Q 018508 154 LDLGPQGVMF 163 (355)
Q Consensus 154 LdaGa~GImv 163 (355)
.++|++.|.+
T Consensus 146 ~~~Gad~Ig~ 155 (229)
T 3q58_A 146 HQKGIEFIGT 155 (229)
T ss_dssp HHTTCSEEEC
T ss_pred HhCCCCEEEe
Confidence 9999998864
No 70
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=94.76 E-value=0.61 Score=42.48 Aligned_cols=182 Identities=14% Similarity=0.146 Sum_probs=99.5
Q ss_pred chHHHHHHHcCCcEEEEEEecC-----CH----HHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHh-CCCCeE--E
Q 018508 73 PESLKYRLQSNETLYGLFLLSF-----SP----TLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAA-TGTPAI--L 140 (355)
Q Consensus 73 ~n~lk~~L~~G~~~~gl~v~~~-----sp----~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~-~g~~~i--V 140 (355)
.+.+.+.|+....++-.....+ ++ .+++.+...|+..|-+. +. +.+++++. ...|++ .
T Consensus 7 ~~~~~~~~~~~~~livscq~~~~~pl~~~~~~~~~A~a~~~~Ga~~i~~~------~~----~~i~~ir~~v~~Pvig~~ 76 (229)
T 3q58_A 7 LARLEQSVHENGGLIVSCQPVPGSPMDKPEIVAAMAQAAASAGAVAVRIE------GI----ENLRTVRPHLSVPIIGII 76 (229)
T ss_dssp HHHHHHHHHHHCCEEEECCCCTTSTTCSHHHHHHHHHHHHHTTCSEEEEE------SH----HHHHHHGGGCCSCEEEEC
T ss_pred HHHHHHHhhhcCCEEEEEeCCCCCCCCCcchHHHHHHHHHHCCCcEEEEC------CH----HHHHHHHHhcCCCEEEEE
Confidence 3567788833233333332222 23 34455567899998872 22 23455443 344443 2
Q ss_pred cCCC--------CCHHHHHHHHhcCCCeEeecC--CCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCC
Q 018508 141 RLPE--------SCPTWAKKALDLGPQGVMFPM--IDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYE 210 (355)
Q Consensus 141 RV~~--------~~~~~i~~aLdaGa~GImvP~--Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n 210 (355)
|... ....++..++++|++.|++=- ..++++++++++.++..
T Consensus 77 k~~~~~~~~~I~~~~~~i~~~~~aGad~I~l~~~~~~~p~~l~~~i~~~~~~---------------------------- 128 (229)
T 3q58_A 77 KRDLTGSPVRITPYLQDVDALAQAGADIIAFDASFRSRPVDIDSLLTRIRLH---------------------------- 128 (229)
T ss_dssp BCCCSSCCCCBSCSHHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHT----------------------------
T ss_pred eecCCCCceEeCccHHHHHHHHHcCCCEEEECccccCChHHHHHHHHHHHHC----------------------------
Confidence 3211 123468889999999887532 23566777777776521
Q ss_pred CceEEEEEEccHHHHHHHHHHhccCCccEEEEChhhHHhhcCCCCCCCCHHHHHHHHHHHHHHHhCCCcee--ecccCCc
Q 018508 211 EELLIMCQVESEEGVKRAEDIAAVDGVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVAEKGVLGGGKAYL--AGFAMPH 288 (355)
Q Consensus 211 ~~i~vi~mIET~~av~nieeIaavpgVD~l~iGp~DLs~slG~~~~~~~p~v~~ai~~iv~aa~a~g~~~~--g~~~~d~ 288 (355)
.+.+++-+-|.+-...+.+ -|+|.|.++...++... ... .|.+ +.+.++.. .+++++ |++ .++
T Consensus 129 -g~~v~~~v~t~eea~~a~~----~Gad~Ig~~~~g~t~~~-~~~---~~~~-~li~~l~~----~~ipvIA~GGI-~t~ 193 (229)
T 3q58_A 129 -GLLAMADCSTVNEGISCHQ----KGIEFIGTTLSGYTGPI-TPV---EPDL-AMVTQLSH----AGCRVIAEGRY-NTP 193 (229)
T ss_dssp -TCEEEEECSSHHHHHHHHH----TTCSEEECTTTTSSSSC-CCS---SCCH-HHHHHHHT----TTCCEEEESSC-CSH
T ss_pred -CCEEEEecCCHHHHHHHHh----CCCCEEEecCccCCCCC-cCC---CCCH-HHHHHHHH----cCCCEEEECCC-CCH
Confidence 2355666666655544433 38898865443332211 111 1221 33333332 255532 333 367
Q ss_pred hhHHHHHHCCCCEEEecch
Q 018508 289 DAPLEMKSRGYHMVSGAVD 307 (355)
Q Consensus 289 ~~a~~~~~~G~~~vs~~~D 307 (355)
+++..+++.|++.+.+|+-
T Consensus 194 ~d~~~~~~~GadgV~VGsa 212 (229)
T 3q58_A 194 ALAANAIEHGAWAVTVGSA 212 (229)
T ss_dssp HHHHHHHHTTCSEEEECHH
T ss_pred HHHHHHHHcCCCEEEEchH
Confidence 8899999999999999943
No 71
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=94.53 E-value=1.6 Score=39.69 Aligned_cols=158 Identities=15% Similarity=0.142 Sum_probs=89.4
Q ss_pred HHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHh-CCCCeE--EcCC--C------CCHHHHHHHHhcCCCeEeecC-
Q 018508 98 LAEISGLAGYDFVVVDMEHGPGGISDALACLHALAA-TGTPAI--LRLP--E------SCPTWAKKALDLGPQGVMFPM- 165 (355)
Q Consensus 98 ~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~-~g~~~i--VRV~--~------~~~~~i~~aLdaGa~GImvP~- 165 (355)
+++.+...|+..+-+. +. +.++.++. ...|++ .|.. + ....++..++++|++.|++=-
T Consensus 41 ~A~a~~~~Ga~~i~~~------~~----~~i~~ir~~v~~Pvig~~k~d~~~~~~~I~~~~~~i~~~~~~Gad~V~l~~~ 110 (232)
T 3igs_A 41 MALAAEQAGAVAVRIE------GI----DNLRMTRSLVSVPIIGIIKRDLDESPVRITPFLDDVDALAQAGAAIIAVDGT 110 (232)
T ss_dssp HHHHHHHTTCSEEEEE------SH----HHHHHHHTTCCSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHCCCeEEEEC------CH----HHHHHHHHhcCCCEEEEEeecCCCcceEeCccHHHHHHHHHcCCCEEEECcc
Confidence 4455567899988762 22 33444443 344443 1421 1 123468889999999887532
Q ss_pred -CCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEEccHHHHHHHHHHhccCCccEEEECh
Q 018508 166 -IDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKRAEDIAAVDGVDCVQMGP 244 (355)
Q Consensus 166 -Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mIET~~av~nieeIaavpgVD~l~iGp 244 (355)
..++++++++++.++.. .+.+++-+-|.+-+..+++ -|+|.|.++.
T Consensus 111 ~~~~p~~l~~~i~~~~~~-----------------------------g~~v~~~v~t~eea~~a~~----~Gad~Ig~~~ 157 (232)
T 3igs_A 111 ARQRPVAVEALLARIHHH-----------------------------HLLTMADCSSVDDGLACQR----LGADIIGTTM 157 (232)
T ss_dssp SSCCSSCHHHHHHHHHHT-----------------------------TCEEEEECCSHHHHHHHHH----TTCSEEECTT
T ss_pred ccCCHHHHHHHHHHHHHC-----------------------------CCEEEEeCCCHHHHHHHHh----CCCCEEEEcC
Confidence 23566777777776521 2355666666655544443 3789886544
Q ss_pred hhHHhhcCCCCCCCCHHHHHHHHHHHHHHHhCCCcee--ecccCCchhHHHHHHCCCCEEEecchH
Q 018508 245 LDLSASMGYLWDPGHRKVREMMRVAEKGVLGGGKAYL--AGFAMPHDAPLEMKSRGYHMVSGAVDV 308 (355)
Q Consensus 245 ~DLs~slG~~~~~~~p~v~~ai~~iv~aa~a~g~~~~--g~~~~d~~~a~~~~~~G~~~vs~~~D~ 308 (355)
..++.... ...+ .. +.+.++.. .+++++ ||+ .+++++..+++.|++.+.+|+-.
T Consensus 158 ~g~t~~~~-~~~~-~~---~~i~~l~~----~~ipvIA~GGI-~t~~d~~~~~~~GadgV~VGsal 213 (232)
T 3igs_A 158 SGYTTPDT-PEEP-DL---PLVKALHD----AGCRVIAEGRY-NSPALAAEAIRYGAWAVTVGSAI 213 (232)
T ss_dssp TTSSSSSC-CSSC-CH---HHHHHHHH----TTCCEEEESCC-CSHHHHHHHHHTTCSEEEECHHH
T ss_pred ccCCCCCC-CCCC-CH---HHHHHHHh----cCCcEEEECCC-CCHHHHHHHHHcCCCEEEEehHh
Confidence 43322111 1112 11 33333332 255533 333 36788999999999999999443
No 72
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=94.48 E-value=0.91 Score=44.95 Aligned_cols=124 Identities=14% Similarity=0.022 Sum_probs=72.1
Q ss_pred HHHHHHHHhcCCCeEee--cCCCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEE-EEEccHH
Q 018508 147 PTWAKKALDLGPQGVMF--PMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIM-CQVESEE 223 (355)
Q Consensus 147 ~~~i~~aLdaGa~GImv--P~Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi-~mIET~~ 223 (355)
...+..++++|++-|++ .+..+ +.+.+.++.++.. - .+.++ ..+=|++
T Consensus 146 ~e~~~~lveaGvdvIvldta~G~~-~~~~e~I~~ik~~---------------------------~-~i~Vi~g~V~t~e 196 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAHGHS-LNIIRTLKEIKSK---------------------------M-NIDVIVGNVVTEE 196 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSCCSB-HHHHHHHHHHHTT---------------------------C-CCEEEEEEECSHH
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCc-ccHHHHHHHHHhc---------------------------C-CCeEEEeecCCHH
Confidence 45677788888888776 44433 3333444444321 0 23455 4788887
Q ss_pred HHHHHHHHhccCCccEEEEChhhHHhhcCCCC---CCCCHHHHHHHHHHHHHHHhCCCcee--ecccCCchhHHHHHHCC
Q 018508 224 GVKRAEDIAAVDGVDCVQMGPLDLSASMGYLW---DPGHRKVREMMRVAEKGVLGGGKAYL--AGFAMPHDAPLEMKSRG 298 (355)
Q Consensus 224 av~nieeIaavpgVD~l~iGp~DLs~slG~~~---~~~~p~v~~ai~~iv~aa~a~g~~~~--g~~~~d~~~a~~~~~~G 298 (355)
....+.+. |+|+|.+|...= +.+... ....|. ..++.++.+++++.+++++ |++ .++.++..++++|
T Consensus 197 ~A~~a~~a----GAD~I~vG~g~G--s~~~tr~~~g~g~p~-~~al~~v~~~~~~~~IPVIA~GGI-~~~~di~kalalG 268 (400)
T 3ffs_A 197 ATKELIEN----GADGIKVGIGPG--SICTTRIVAGVGVPQ-ITAIEKCSSVASKFGIPIIADGGI-RYSGDIGKALAVG 268 (400)
T ss_dssp HHHHHHHT----TCSEEEECC-----------CCSCBCCCH-HHHHHHHHHHHTTTTCCEEEESCC-CSHHHHHHHHTTT
T ss_pred HHHHHHHc----CCCEEEEeCCCC--cCcccccccccchhH-HHHHHHHHHHHHhcCCCEEecCCC-CCHHHHHHHHHcC
Confidence 77666542 899999975321 111100 111233 3556667666665566643 334 4577888889999
Q ss_pred CCEEEecch
Q 018508 299 YHMVSGAVD 307 (355)
Q Consensus 299 ~~~vs~~~D 307 (355)
.+.+.+|+=
T Consensus 269 Ad~V~vGt~ 277 (400)
T 3ffs_A 269 ASSVMIGSI 277 (400)
T ss_dssp CSEEEECGG
T ss_pred CCEEEEChH
Confidence 999999854
No 73
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=94.46 E-value=3.5 Score=39.27 Aligned_cols=212 Identities=16% Similarity=0.177 Sum_probs=122.6
Q ss_pred CchHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEE--e--------CCCC-CCCHHHHHHHHHHHHh-C-CCCe
Q 018508 72 SPESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVV--D--------MEHG-PGGISDALACLHALAA-T-GTPA 138 (355)
Q Consensus 72 ~~n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vil--D--------lEh~-~~~~~~a~~~i~a~~~-~-g~~~ 138 (355)
...+||++|.+++..+ ...+.-+...+.++..+|||.|++ | ..|. +.+.+++...++.+.. . ..++
T Consensus 5 ~~~~Lr~ll~~~~~~i-~~~~a~D~~sA~l~e~aGf~ai~vsG~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~~~~Pv 83 (302)
T 3fa4_A 5 AATSLRRALENPDSFI-VAPGVYDGLSARVALSAGFDALYMTGAGTAASVHGQADLGICTLNDMRANAEMISNISPSTPV 83 (302)
T ss_dssp HHHHHHHHHHSTTCCE-EEEEECSHHHHHHHHTTTCSCEEECHHHHHHHHHSCCSSSCCCHHHHHHHHHHHHTTSTTSCE
T ss_pred HHHHHHHHHhCCCCeE-EEecCcCHHHHHHHHHcCCCEEEeCcHHHHHHHcCCCCCCcCCHHHHHHHHHHHHhhccCCCE
Confidence 3478999999876422 122455888888888999999998 2 1222 3556676666665543 2 5677
Q ss_pred EEcCCCC--CHH----HHHHHHhcCCCeEee-----cC---------CCCHHH-HHHHHHHcCCCCCCCCCCcccccccc
Q 018508 139 ILRLPES--CPT----WAKKALDLGPQGVMF-----PM---------IDSPEA-AKEAVSYCRFPPSGVRGSAHTVVRAS 197 (355)
Q Consensus 139 iVRV~~~--~~~----~i~~aLdaGa~GImv-----P~---------Vesaee-a~~vv~a~~~pP~G~Rg~g~~~~ra~ 197 (355)
+|=.+.. ++. .++++.++|+.||.+ |+ +-+.++ +.++..+..- |
T Consensus 84 iaD~d~Gyg~~~~v~~tv~~l~~aGaagv~iEDq~~~Krcgh~~gk~l~~~~e~~~rI~Aa~~A-------------~-- 148 (302)
T 3fa4_A 84 IADADTGYGGPIMVARTTEQYSRSGVAAFHIEDQVQTKRCGHLAGKILVDTDTYVTRIRAAVQA-------------R-- 148 (302)
T ss_dssp EEECTTTTSSHHHHHHHHHHHHHTTCCEEEECSBCCC-------CCCBCCHHHHHHHHHHHHHH-------------H--
T ss_pred EEECCCCCCCHHHHHHHHHHHHHcCCcEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHH-------------H--
Confidence 7776654 332 356778899988754 32 123333 3333322210 0
Q ss_pred cCCCCccccccCCCceEEEEEEccH------HHHHHHHHHhccCCccEEEE-ChhhHHhhcCCCCCCCCHHHHHHHHHHH
Q 018508 198 GYGIDEGYLSNYEEELLIMCQVESE------EGVKRAEDIAAVDGVDCVQM-GPLDLSASMGYLWDPGHRKVREMMRVAE 270 (355)
Q Consensus 198 ~~g~~~~y~~~~n~~i~vi~mIET~------~av~nieeIaavpgVD~l~i-Gp~DLs~slG~~~~~~~p~v~~ai~~iv 270 (355)
...+.++.|++=.|+. ++++.+...++ -|-|+||+ |.. .++ .+++++
T Consensus 149 ---------~~~~~d~~I~ARTDa~~~~gldeAi~Ra~ay~e-AGAD~ifi~g~~-------------~~~---ei~~~~ 202 (302)
T 3fa4_A 149 ---------QRIGSDIVVIARTDSLQTHGYEESVARLRAARD-AGADVGFLEGIT-------------SRE---MARQVI 202 (302)
T ss_dssp ---------HHHTCCCEEEEEECCHHHHCHHHHHHHHHHHHT-TTCSEEEETTCC-------------CHH---HHHHHH
T ss_pred ---------HhcCCCEEEEEEecccccCCHHHHHHHHHHHHH-cCCCEEeecCCC-------------CHH---HHHHHH
Confidence 0013457888888876 35666666654 38999997 321 122 233333
Q ss_pred HHHHhCCCceeecc-c--CCc-hhHHHHHHCCCCEEEecchHH-HHHHHHHHHHHHHHHhcC
Q 018508 271 KGVLGGGKAYLAGF-A--MPH-DAPLEMKSRGYHMVSGAVDVG-LFRSAAVEDVARFKMNLT 327 (355)
Q Consensus 271 ~aa~a~g~~~~g~~-~--~d~-~~a~~~~~~G~~~vs~~~D~~-ll~~~~~~~~~~~r~~~~ 327 (355)
++.. +++....+ . ..+ -...++.++||+.++++.-.. ....++++.+..++....
T Consensus 203 ~~~~--~~Pl~~n~~~~g~~p~~~~~eL~~lGv~~v~~~~~~~raa~~A~~~~~~~i~~~g~ 262 (302)
T 3fa4_A 203 QDLA--GWPLLLNMVEHGATPSISAAEAKEMGFRIIIFPFAALGPAVAAMREAMEKLKRDGI 262 (302)
T ss_dssp HHTT--TSCEEEECCTTSSSCCCCHHHHHHHTCSEEEETTTTHHHHHHHHHHHHHHHHHHSS
T ss_pred HHhc--CCceeEEEecCCCCCCCCHHHHHHcCCCEEEEchHHHHHHHHHHHHHHHHHHHcCC
Confidence 3331 33322221 1 122 246788999999999997763 345566666666666543
No 74
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=94.36 E-value=1.2 Score=41.03 Aligned_cols=188 Identities=16% Similarity=0.098 Sum_probs=105.5
Q ss_pred chHHHHHHHcCCcEEEEEEe--cCC---------HHHHHHhhhcCCcEEEE-eCCCCC-CCHHHHHHHHHHHHhCCCCeE
Q 018508 73 PESLKYRLQSNETLYGLFLL--SFS---------PTLAEISGLAGYDFVVV-DMEHGP-GGISDALACLHALAATGTPAI 139 (355)
Q Consensus 73 ~n~lk~~L~~G~~~~gl~v~--~~s---------p~~~e~aa~~G~D~vil-DlEh~~-~~~~~a~~~i~a~~~~g~~~i 139 (355)
+..|+++|++..+.+=.=+. .+| .+.++.+...|+++|=+ |.++.- ...+..+...+ ..+.+++
T Consensus 34 ~~~~~~al~~~~~~~IaE~k~aSPskg~i~~~~p~~~A~~~~~~GA~~isvlt~~~~f~G~~~~l~~i~~---~v~lPvl 110 (254)
T 1vc4_A 34 VPSFKEALLRPGLSVIAEVKRQSPSEGLIREVDPVEAALAYARGGARAVSVLTEPHRFGGSLLDLKRVRE---AVDLPLL 110 (254)
T ss_dssp CCCHHHHHTSSSCEEEEEECSCCTTTCCCCSCCHHHHHHHHHHTTCSEEEEECCCSSSCCCHHHHHHHHH---HCCSCEE
T ss_pred ccCHHHHHhhcCCcEEeeecCCCcCCCcCCCCCHHHHHHHHHHcCCCEEEEecchhhhccCHHHHHHHHH---hcCCCEE
Confidence 34688888754332222222 222 35667778899999766 555442 24444333332 3456655
Q ss_pred EcCCCCCHHHHHHHHhcCCCeEeecCC-CCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEE
Q 018508 140 LRLPESCPTWAKKALDLGPQGVMFPMI-DSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQ 218 (355)
Q Consensus 140 VRV~~~~~~~i~~aLdaGa~GImvP~V-esaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~m 218 (355)
++=--.++.++..++.+||++|++-.. -+ ++++++++.++. +| +.+.+-
T Consensus 111 ~kdfI~d~~qi~~a~~~GAD~VlL~~~~l~-~~l~~l~~~a~~-----------------lG------------l~~lve 160 (254)
T 1vc4_A 111 RKDFVVDPFMLEEARAFGASAALLIVALLG-ELTGAYLEEARR-----------------LG------------LEALVE 160 (254)
T ss_dssp EESCCCSHHHHHHHHHTTCSEEEEEHHHHG-GGHHHHHHHHHH-----------------HT------------CEEEEE
T ss_pred ECCcCCCHHHHHHHHHcCCCEEEECccchH-HHHHHHHHHHHH-----------------CC------------CeEEEE
Confidence 443335677899999999999987443 12 567777665431 11 233455
Q ss_pred EccHHHHHHHHHHhccCCccEEEEChhhHHhhcCCCCCCCCHHHHHHHHHHHHHHHhC--CCce--eecccCCchhHHHH
Q 018508 219 VESEEGVKRAEDIAAVDGVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVAEKGVLGG--GKAY--LAGFAMPHDAPLEM 294 (355)
Q Consensus 219 IET~~av~nieeIaavpgVD~l~iGp~DLs~slG~~~~~~~p~v~~ai~~iv~aa~a~--g~~~--~g~~~~d~~~a~~~ 294 (355)
+.+.+=+..+.+. +.|.+-+++-||. .++ ++-... .++....... ++.. .||+ .+++++..+
T Consensus 161 v~~~~E~~~a~~~----gad~IGvn~~~l~-~~~----~dl~~~----~~L~~~i~~~~~~~~vIAegGI-~s~~dv~~l 226 (254)
T 1vc4_A 161 VHTERELEIALEA----GAEVLGINNRDLA-TLH----INLETA----PRLGRLARKRGFGGVLVAESGY-SRKEELKAL 226 (254)
T ss_dssp ECSHHHHHHHHHH----TCSEEEEESBCTT-TCC----BCTTHH----HHHHHHHHHTTCCSEEEEESCC-CSHHHHHTT
T ss_pred ECCHHHHHHHHHc----CCCEEEEccccCc-CCC----CCHHHH----HHHHHhCccccCCCeEEEEcCC-CCHHHHHHH
Confidence 5565544433332 4588888888764 221 222222 2333333322 3332 2333 357889999
Q ss_pred HHCCCCEEEecchH
Q 018508 295 KSRGYHMVSGAVDV 308 (355)
Q Consensus 295 ~~~G~~~vs~~~D~ 308 (355)
.+ |++.+.+|+-.
T Consensus 227 ~~-Ga~gvlVGsAl 239 (254)
T 1vc4_A 227 EG-LFDAVLIGTSL 239 (254)
T ss_dssp TT-TCSEEEECHHH
T ss_pred Hc-CCCEEEEeHHH
Confidence 99 99999998643
No 75
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=94.35 E-value=0.76 Score=40.29 Aligned_cols=116 Identities=11% Similarity=0.056 Sum_probs=68.7
Q ss_pred HHHHHHhcCCCeEeecCCCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEE---EccHHHH
Q 018508 149 WAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQ---VESEEGV 225 (355)
Q Consensus 149 ~i~~aLdaGa~GImvP~Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~m---IET~~av 225 (355)
.+..+.++|+++|++|-....++++.+++.++.. | ..+++- .+|+ +
T Consensus 69 ~~~~~~~~Gad~v~v~~~~~~~~~~~~~~~~~~~--g---------------------------~~~~v~~~~~~t~--~ 117 (211)
T 3f4w_A 69 ESQLLFDAGADYVTVLGVTDVLTIQSCIRAAKEA--G---------------------------KQVVVDMICVDDL--P 117 (211)
T ss_dssp HHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHH--T---------------------------CEEEEECTTCSSH--H
T ss_pred HHHHHHhcCCCEEEEeCCCChhHHHHHHHHHHHc--C---------------------------CeEEEEecCCCCH--H
Confidence 4899999999999998776667778888877531 1 112221 3454 3
Q ss_pred HHHHHHhccCCccEEEEChhhHHhhcCCCCCCCCHHHHHHHHHHHHHHHhCCCce--eecccCCchhHHHHHHCCCCEEE
Q 018508 226 KRAEDIAAVDGVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVAEKGVLGGGKAY--LAGFAMPHDAPLEMKSRGYHMVS 303 (355)
Q Consensus 226 ~nieeIaavpgVD~l~iGp~DLs~slG~~~~~~~p~v~~ai~~iv~aa~a~g~~~--~g~~~~d~~~a~~~~~~G~~~vs 303 (355)
+.++.+... |+|+|.+.++==.+..+ +... +.++++.+.. ...++ .||+ +++.++.+++.|.+.+.
T Consensus 118 ~~~~~~~~~-g~d~i~v~~g~~g~~~~----~~~~---~~i~~l~~~~--~~~~i~~~gGI--~~~~~~~~~~~Gad~vv 185 (211)
T 3f4w_A 118 ARVRLLEEA-GADMLAVHTGTDQQAAG----RKPI---DDLITMLKVR--RKARIAVAGGI--SSQTVKDYALLGPDVVI 185 (211)
T ss_dssp HHHHHHHHH-TCCEEEEECCHHHHHTT----CCSH---HHHHHHHHHC--SSCEEEEESSC--CTTTHHHHHTTCCSEEE
T ss_pred HHHHHHHHc-CCCEEEEcCCCcccccC----CCCH---HHHHHHHHHc--CCCcEEEECCC--CHHHHHHHHHcCCCEEE
Confidence 445555543 68888876431111221 1122 2233332221 13333 4445 47889999999999999
Q ss_pred ecch
Q 018508 304 GAVD 307 (355)
Q Consensus 304 ~~~D 307 (355)
+|+-
T Consensus 186 vGsa 189 (211)
T 3f4w_A 186 VGSA 189 (211)
T ss_dssp ECHH
T ss_pred ECHH
Confidence 9963
No 76
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=94.28 E-value=3.7 Score=38.87 Aligned_cols=206 Identities=15% Similarity=0.162 Sum_probs=118.5
Q ss_pred chHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeC------CCC-----CCCHHHHHHHHHHH-HhCCCCeEE
Q 018508 73 PESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDM------EHG-----PGGISDALACLHAL-AATGTPAIL 140 (355)
Q Consensus 73 ~n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDl------Eh~-----~~~~~~a~~~i~a~-~~~g~~~iV 140 (355)
...||++++.|+++. ..+.-+...+.++..+|||.|++-- -++ +.+.+++...++.+ +....+++|
T Consensus 6 ~~~lr~l~~~~~~i~--~~~a~D~~sA~~~~~aG~~ai~vs~~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~~~Pvia 83 (295)
T 1xg4_A 6 GKAFRAALTKENPLQ--IVGTINANHALLAQRAGYQAIYLSGGGVAAGSLGLPDLGISTLDDVLTDIRRITDVCSLPLLV 83 (295)
T ss_dssp HHHHHHHHHHSSSEE--EEECSSHHHHHHHHHTTCSCEEECHHHHHHTTTCCCSSSCSCHHHHHHHHHHHHHHCCSCEEE
T ss_pred HHHHHHHHhCCCcEE--EecCcCHHHHHHHHHcCCCEEEECchHhhhhhcCCCCCCCCCHHHHHHHHHHHHhhCCCCEEe
Confidence 367999999998854 3456788888888899999988741 122 34667776666654 355677777
Q ss_pred cCCCC---CHH----HHHHHHhcCCCeEee-----cCC---------CCH-HHHHHHHHHcCCCCCCCCCCccccccccc
Q 018508 141 RLPES---CPT----WAKKALDLGPQGVMF-----PMI---------DSP-EAAKEAVSYCRFPPSGVRGSAHTVVRASG 198 (355)
Q Consensus 141 RV~~~---~~~----~i~~aLdaGa~GImv-----P~V---------esa-eea~~vv~a~~~pP~G~Rg~g~~~~ra~~ 198 (355)
=.+.. ++. .++++.++|+.||.+ |++ -+. +.+.++..+..-.
T Consensus 84 D~d~Gyg~~~~~~~~~v~~l~~aGa~gv~iEd~~~~k~cgH~~gk~L~p~~~~~~~I~Aa~~a~---------------- 147 (295)
T 1xg4_A 84 DADIGFGSSAFNVARTVKSMIKAGAAGLHIEDQVGAKRSGHRPNKAIVSKEEMVDRIRAAVDAK---------------- 147 (295)
T ss_dssp ECTTCSSSSHHHHHHHHHHHHHHTCSEEEEECBCSSCCCTTSSSCCBCCHHHHHHHHHHHHHHC----------------
T ss_pred cCCcccCCCHHHHHHHHHHHHHcCCeEEEECCCCCCcccCCCCCCccCCHHHHHHHHHHHHHhc----------------
Confidence 77544 333 356778899987764 222 111 2223322222110
Q ss_pred CCCCccccccCCCceEEEEEEccH------HHHHHHHHHhccCCccEEEEChhhHHhhcCCCCCCCCHHHHHHHHHHHHH
Q 018508 199 YGIDEGYLSNYEEELLIMCQVESE------EGVKRAEDIAAVDGVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVAEKG 272 (355)
Q Consensus 199 ~g~~~~y~~~~n~~i~vi~mIET~------~av~nieeIaavpgVD~l~iGp~DLs~slG~~~~~~~p~v~~ai~~iv~a 272 (355)
.+....|.+-.|.. ++++.+....+ -|.|+||+=. . + .++ .+.++.++
T Consensus 148 ----------~~~~~~i~aRtda~~~~gl~~ai~ra~ay~e-AGAd~i~~e~--------~---~-~~~---~~~~i~~~ 201 (295)
T 1xg4_A 148 ----------TDPDFVIMARTDALAVEGLDAAIERAQAYVE-AGAEMLFPEA--------I---T-ELA---MYRQFADA 201 (295)
T ss_dssp ----------SSTTSEEEEEECCHHHHCHHHHHHHHHHHHH-TTCSEEEETT--------C---C-SHH---HHHHHHHH
T ss_pred ----------cCCCcEEEEecHHhhhcCHHHHHHHHHHHHH-cCCCEEEEeC--------C---C-CHH---HHHHHHHH
Confidence 01235667777653 45666665554 3899999821 1 1 122 23334333
Q ss_pred HHhCCCceeeccc---CCc-hhHHHHHHCCCCEEEecchHH-HHHHHHHHHHHHHHHh
Q 018508 273 VLGGGKAYLAGFA---MPH-DAPLEMKSRGYHMVSGAVDVG-LFRSAAVEDVARFKMN 325 (355)
Q Consensus 273 a~a~g~~~~g~~~---~d~-~~a~~~~~~G~~~vs~~~D~~-ll~~~~~~~~~~~r~~ 325 (355)
. .++.+..+. .++ -..+++.++||+.++++.-.. ....++.+.+..++..
T Consensus 202 ~---~iP~~~N~~~~g~~p~~~~~eL~~~G~~~v~~~~~~~~aa~~a~~~~~~~i~~~ 256 (295)
T 1xg4_A 202 V---QVPILANITEFGATPLFTTDELRSAHVAMALYPLSAFRAMNRAAEHVYNVLRQE 256 (295)
T ss_dssp H---CSCBEEECCSSSSSCCCCHHHHHHTTCSEEEESSHHHHHHHHHHHHHHHHHHHH
T ss_pred c---CCCEEEEecccCCCCCCCHHHHHHcCCCEEEEChHHHHHHHHHHHHHHHHHHHh
Confidence 3 244332221 222 346789999999999987643 2333444455555553
No 77
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=94.23 E-value=0.94 Score=40.36 Aligned_cols=94 Identities=16% Similarity=0.100 Sum_probs=61.1
Q ss_pred CCcEEEEEEecCCHH-HHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEE-cCCCCCHHHHHHHHhcCCCe
Q 018508 83 NETLYGLFLLSFSPT-LAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAIL-RLPESCPTWAKKALDLGPQG 160 (355)
Q Consensus 83 G~~~~gl~v~~~sp~-~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iV-RV~~~~~~~i~~aLdaGa~G 160 (355)
+.+++.-+-....|. .++.++.+|+|++++..|-. .+.+...++.++..|..+.+ -++...+..+..+.+.|++-
T Consensus 59 ~~~i~ld~~l~d~p~~~~~~~~~aGad~i~vh~~~~---~~~~~~~~~~~~~~g~~~~~d~l~~~T~~~~~~~~~~g~d~ 135 (218)
T 3jr2_A 59 NHILVCDMKTTDGGAILSRMAFEAGADWITVSAAAH---IATIAACKKVADELNGEIQIEIYGNWTMQDAKAWVDLGITQ 135 (218)
T ss_dssp TSEEEEEEEECSCHHHHHHHHHHHTCSEEEEETTSC---HHHHHHHHHHHHHHTCEEEEECCSSCCHHHHHHHHHTTCCE
T ss_pred CCcEEEEEeecccHHHHHHHHHhcCCCEEEEecCCC---HHHHHHHHHHHHHhCCccceeeeecCCHHHHHHHHHcCccc
Confidence 345553332234454 57889999999999998854 34556666666667777766 45555677788888889997
Q ss_pred EeecCC---------CCHHHHHHHHHHc
Q 018508 161 VMFPMI---------DSPEAAKEAVSYC 179 (355)
Q Consensus 161 ImvP~V---------esaeea~~vv~a~ 179 (355)
+++.+. -++++++.+.+..
T Consensus 136 v~~~~~~~~~~~g~~~~~~~l~~i~~~~ 163 (218)
T 3jr2_A 136 AIYHRSRDAELAGIGWTTDDLDKMRQLS 163 (218)
T ss_dssp EEEECCHHHHHHTCCSCHHHHHHHHHHH
T ss_pred eeeeeccccccCCCcCCHHHHHHHHHHh
Confidence 766432 2445555555543
No 78
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=94.18 E-value=0.46 Score=48.18 Aligned_cols=79 Identities=16% Similarity=0.090 Sum_probs=54.9
Q ss_pred CCcEEEEEEec--CCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHh-C-CCCeEEcCCCCCHHHHHHHHhcCC
Q 018508 83 NETLYGLFLLS--FSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAA-T-GTPAILRLPESCPTWAKKALDLGP 158 (355)
Q Consensus 83 G~~~~gl~v~~--~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~-~-g~~~iVRV~~~~~~~i~~aLdaGa 158 (355)
|+..++.-+.. ...+.++.+...|+|+|.||.-|+-. +...+.++.++. . +.++++ -+-......+.+.++|+
T Consensus 218 grL~v~aavG~~~d~~~~a~~l~~aG~d~I~id~a~g~~--~~~~~~i~~ir~~~p~~~Vi~-g~v~t~e~a~~l~~aGa 294 (496)
T 4fxs_A 218 GRLRVGAAVGAAPGNEERVKALVEAGVDVLLIDSSHGHS--EGVLQRIRETRAAYPHLEIIG-GNVATAEGARALIEAGV 294 (496)
T ss_dssp SCBCCEEECCSSSCCHHHHHHHHHTTCSEEEEECSCTTS--HHHHHHHHHHHHHCTTCCEEE-EEECSHHHHHHHHHHTC
T ss_pred cceeeeeeeccccchHHHHHHHHhccCceEEeccccccc--hHHHHHHHHHHHHCCCceEEE-cccCcHHHHHHHHHhCC
Confidence 44455555443 45678888999999999999999632 445556665543 3 455555 23345678899999999
Q ss_pred CeEeec
Q 018508 159 QGVMFP 164 (355)
Q Consensus 159 ~GImvP 164 (355)
++|.+.
T Consensus 295 D~I~Vg 300 (496)
T 4fxs_A 295 SAVKVG 300 (496)
T ss_dssp SEEEEC
T ss_pred CEEEEC
Confidence 999985
No 79
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=94.06 E-value=0.68 Score=36.89 Aligned_cols=103 Identities=13% Similarity=0.115 Sum_probs=64.3
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHh----CCCCeEEcCCCCCHHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAA----TGTPAILRLPESCPTW 149 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~----~g~~~iVRV~~~~~~~ 149 (355)
..+++.|..-...+-+....+..+..+.+....+|.|++|+.-...+--+ .++.++. ...++++=....+...
T Consensus 19 ~~l~~~L~~~~~~~~v~~~~~~~~a~~~l~~~~~dlii~D~~l~~~~g~~---~~~~lr~~~~~~~~pii~~s~~~~~~~ 95 (144)
T 3kht_A 19 ALIRRVLDRKDIHCQLEFVDNGAKALYQVQQAKYDLIILDIGLPIANGFE---VMSAVRKPGANQHTPIVILTDNVSDDR 95 (144)
T ss_dssp HHHHHHHHHTTCCEEEEEESSHHHHHHHHTTCCCSEEEECTTCGGGCHHH---HHHHHHSSSTTTTCCEEEEETTCCHHH
T ss_pred HHHHHHHHhcCCCeeEEEECCHHHHHHHhhcCCCCEEEEeCCCCCCCHHH---HHHHHHhcccccCCCEEEEeCCCCHHH
Confidence 45666776543332233333445566777778899999999865433333 3333332 2345555555667788
Q ss_pred HHHHHhcCCCeEeecCCCCHHHHHHHHHHc
Q 018508 150 AKKALDLGPQGVMFPMIDSPEAAKEAVSYC 179 (355)
Q Consensus 150 i~~aLdaGa~GImvP~Vesaeea~~vv~a~ 179 (355)
+.++++.|+++++.--+.+.+++...++.+
T Consensus 96 ~~~~~~~ga~~~l~Kp~~~~~~l~~~i~~~ 125 (144)
T 3kht_A 96 AKQCMAAGASSVVDKSSNNVTDFYGRIYAI 125 (144)
T ss_dssp HHHHHHTTCSEEEECCTTSHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECCCCcHHHHHHHHHHH
Confidence 899999999997654443788887666543
No 80
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=94.04 E-value=1.8 Score=38.09 Aligned_cols=175 Identities=17% Similarity=0.142 Sum_probs=90.8
Q ss_pred HHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHH-hCCCCeE--EcCC--C------CCHHHHHHHHhcCCCeEeecC
Q 018508 97 TLAEISGLAGYDFVVVDMEHGPGGISDALACLHALA-ATGTPAI--LRLP--E------SCPTWAKKALDLGPQGVMFPM 165 (355)
Q Consensus 97 ~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~-~~g~~~i--VRV~--~------~~~~~i~~aLdaGa~GImvP~ 165 (355)
++++.+...|++++-++ +.+. ++.++ ..+.+.+ +|-. + .....+..++++|++.|.+..
T Consensus 27 ~~a~~~~~~Ga~~i~~~------~~~~----i~~i~~~~~~pv~~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~v~l~~ 96 (223)
T 1y0e_A 27 KMALAAYEGGAVGIRAN------TKED----ILAIKETVDLPVIGIVKRDYDHSDVFITATSKEVDELIESQCEVIALDA 96 (223)
T ss_dssp HHHHHHHHHTCSEEEEE------SHHH----HHHHHHHCCSCEEEECBCCCTTCCCCBSCSHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHCCCeeeccC------CHHH----HHHHHHhcCCCEEeeeccCCCccccccCCcHHHHHHHHhCCCCEEEEee
Confidence 45566677899998775 2233 33332 2344432 1211 1 234578889999999988654
Q ss_pred CC--CH-HHHHHHHHHcC--CCCCCCCCCcccccccccCCCCccccccCCCceEEEEEEccHHHHHHHHHHhccCCccEE
Q 018508 166 ID--SP-EAAKEAVSYCR--FPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKRAEDIAAVDGVDCV 240 (355)
Q Consensus 166 Ve--sa-eea~~vv~a~~--~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mIET~~av~nieeIaavpgVD~l 240 (355)
.. ++ +.+.++++.++ || ...+++-+-|++-+..++ --|+|.|
T Consensus 97 ~~~~~p~~~~~~~i~~~~~~~~-----------------------------~~~v~~~~~t~~e~~~~~----~~G~d~i 143 (223)
T 1y0e_A 97 TLQQRPKETLDELVSYIRTHAP-----------------------------NVEIMADIATVEEAKNAA----RLGFDYI 143 (223)
T ss_dssp SCSCCSSSCHHHHHHHHHHHCT-----------------------------TSEEEEECSSHHHHHHHH----HTTCSEE
T ss_pred ecccCcccCHHHHHHHHHHhCC-----------------------------CceEEecCCCHHHHHHHH----HcCCCEE
Confidence 32 11 22334444433 11 123455566655433322 2378998
Q ss_pred EEChhhHHhhcCCCCCCC-CHHHHHHHHHHHHHHHhCCCce--eecccCCchhHHHHHHCCCCEEEecchHHHHHHHHHH
Q 018508 241 QMGPLDLSASMGYLWDPG-HRKVREMMRVAEKGVLGGGKAY--LAGFAMPHDAPLEMKSRGYHMVSGAVDVGLFRSAAVE 317 (355)
Q Consensus 241 ~iGp~DLs~slG~~~~~~-~p~v~~ai~~iv~aa~a~g~~~--~g~~~~d~~~a~~~~~~G~~~vs~~~D~~ll~~~~~~ 317 (355)
.+++..++. ...+.. ...-.+.+.++... .+.++ .|++ .+++.+..+++.|++.+.+|+- ++. -..
T Consensus 144 ~~~~~g~t~---~~~~~~~~~~~~~~~~~~~~~---~~ipvia~GGI-~~~~~~~~~~~~Gad~v~vG~a--l~~--p~~ 212 (223)
T 1y0e_A 144 GTTLHGYTS---YTQGQLLYQNDFQFLKDVLQS---VDAKVIAEGNV-ITPDMYKRVMDLGVHCSVVGGA--ITR--PKE 212 (223)
T ss_dssp ECTTTTSST---TSTTCCTTHHHHHHHHHHHHH---CCSEEEEESSC-CSHHHHHHHHHTTCSEEEECHH--HHC--HHH
T ss_pred EeCCCcCcC---CCCCCCCCcccHHHHHHHHhh---CCCCEEEecCC-CCHHHHHHHHHcCCCEEEEChH--HcC--cHH
Confidence 876643321 111110 12223344444332 34443 3333 3678899999999999999954 343 233
Q ss_pred HHHHHHHh
Q 018508 318 DVARFKMN 325 (355)
Q Consensus 318 ~~~~~r~~ 325 (355)
..+.+++.
T Consensus 213 ~~~~~~~~ 220 (223)
T 1y0e_A 213 ITKRFVQV 220 (223)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHH
Confidence 44455443
No 81
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=94.03 E-value=2.1 Score=38.44 Aligned_cols=83 Identities=13% Similarity=0.023 Sum_probs=50.2
Q ss_pred HHHHHhhhcCCcEEEEeCCCCCCC-HHHHHHHHHHHHh-CCCCeEEcCCCCCHHHHHHHHhcCCCeEeecCC--CCHHHH
Q 018508 97 TLAEISGLAGYDFVVVDMEHGPGG-ISDALACLHALAA-TGTPAILRLPESCPTWAKKALDLGPQGVMFPMI--DSPEAA 172 (355)
Q Consensus 97 ~~~e~aa~~G~D~vilDlEh~~~~-~~~a~~~i~a~~~-~g~~~iVRV~~~~~~~i~~aLdaGa~GImvP~V--esaeea 172 (355)
+.++.+...|+|++.+.-.++... .......++.+.. .+.++++=-.-.++..+..++++|+++|++..- ++++.+
T Consensus 34 ~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~~~ipvi~~ggI~~~~~~~~~~~~Gad~V~lg~~~l~~p~~~ 113 (253)
T 1thf_D 34 ELGKFYSEIGIDELVFLDITASVEKRKTMLELVEKVAEQIDIPFTVGGGIHDFETASELILRGADKVSINTAAVENPSLI 113 (253)
T ss_dssp HHHHHHHHTTCCEEEEEESSCSSSHHHHHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHHHTTCSEEEESHHHHHCTHHH
T ss_pred HHHHHHHHcCCCEEEEECCchhhcCCcccHHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHcCCCEEEEChHHHhChHHH
Confidence 456777889999976654444322 2223344555543 455555422223467899999999999998763 445556
Q ss_pred HHHHHHc
Q 018508 173 KEAVSYC 179 (355)
Q Consensus 173 ~~vv~a~ 179 (355)
.++.+.+
T Consensus 114 ~~~~~~~ 120 (253)
T 1thf_D 114 TQIAQTF 120 (253)
T ss_dssp HHHHHHH
T ss_pred HHHHHHc
Confidence 6665543
No 82
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=93.84 E-value=4.5 Score=38.24 Aligned_cols=215 Identities=16% Similarity=0.146 Sum_probs=119.8
Q ss_pred CchHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCC--------------CC-CH-HHHHHHHHHHH--h
Q 018508 72 SPESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHG--------------PG-GI-SDALACLHALA--A 133 (355)
Q Consensus 72 ~~n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~--------------~~-~~-~~a~~~i~a~~--~ 133 (355)
...+||+++++|+|++|.-. .+.-.++.+...|+|+|++ +--+ |+ +- +-..++.+.+. .
T Consensus 16 il~~l~~~i~~~~~iig~ga--GtGlsAk~~e~gGaDlii~-ynsGrfR~~G~~slag~lpygnaN~iv~e~~~evlp~v 92 (286)
T 2p10_A 16 LVDRFQKKIRAGEPIIGGGA--GTGLSAKSEEAGDIDLIVI-YNSGRYRMAGRGSLAGLLAYGNANQIVVDMAREVLPVV 92 (286)
T ss_dssp HHHHHHHHHHTTCCEEEEEE--SSHHHHHHHHHTTCSEEEE-CHHHHHHHTTCCGGGGGBTEEEHHHHHHHHHHHHGGGC
T ss_pred HHHHHHHHHhcCCceEEEec--ccchhhHHHHhCCCCEEEE-eccchhhhcCccchhhhccccCHHHHHHHHHHhhhccC
Confidence 35678899999999999764 5556667777789999987 2111 00 00 11112222221 2
Q ss_pred CCCCeEEcCCCCCHH-----HHHHHHhcCCCeEe-ecCC---C------------CHHHHHHHHHHcCCCCCCCCCCccc
Q 018508 134 TGTPAILRLPESCPT-----WAKKALDLGPQGVM-FPMI---D------------SPEAAKEAVSYCRFPPSGVRGSAHT 192 (355)
Q Consensus 134 ~g~~~iVRV~~~~~~-----~i~~aLdaGa~GIm-vP~V---e------------saeea~~vv~a~~~pP~G~Rg~g~~ 192 (355)
...+++.=|+..+|. .+..+.++|+.||+ +|-| + +-++..++++.++.
T Consensus 93 ~~iPV~Agv~~~DP~~~~g~~Le~lk~~Gf~Gv~N~ptvglidG~fr~~LEE~gm~~~~eve~I~~A~~----------- 161 (286)
T 2p10_A 93 RHTPVLAGVNGTDPFMVMSTFLRELKEIGFAGVQNFPTVGLIDGLFRQNLEETGMSYAQEVEMIAEAHK----------- 161 (286)
T ss_dssp SSSCEEEEECTTCTTCCHHHHHHHHHHHTCCEEEECSCGGGCCHHHHHHHHHTTCCHHHHHHHHHHHHH-----------
T ss_pred CCCCEEEEECCcCCCcCHHHHHHHHHHhCCceEEECCCcccccchhhhhHhhcCCCHHHHHHHHHHHHH-----------
Confidence 356777777777652 45677789999983 5511 1 23333334433331
Q ss_pred ccccccCCCCccccccCCCceEEEEEEccHHHHHHHHHHhccCCccEEEEChh----hHHhhcCCCCCCCCHHHHHHHHH
Q 018508 193 VVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKRAEDIAAVDGVDCVQMGPL----DLSASMGYLWDPGHRKVREMMRV 268 (355)
Q Consensus 193 ~~ra~~~g~~~~y~~~~n~~i~vi~mIET~~av~nieeIaavpgVD~l~iGp~----DLs~slG~~~~~~~p~v~~ai~~ 268 (355)
..+..++-+=+++= +.++++. |.|.|.+=+. -| +|......-.+-.+.+++
T Consensus 162 ------------------~gL~Ti~~v~~~ee---A~amA~a-gpDiI~~h~glT~ggl---IG~~~avs~~~~~e~i~~ 216 (286)
T 2p10_A 162 ------------------LDLLTTPYVFSPED---AVAMAKA-GADILVCHMGLTTGGA---IGARSGKSMDDCVSLINE 216 (286)
T ss_dssp ------------------TTCEECCEECSHHH---HHHHHHH-TCSEEEEECSCC------------CCCHHHHHHHHHH
T ss_pred ------------------CCCeEEEecCCHHH---HHHHHHc-CCCEEEECCCCCCCCc---ccCCCcccHHHhHHHHHH
Confidence 11233333333322 2223322 5677666444 22 222111112222456777
Q ss_pred HHHHHHhCCCc---eeec-ccCCchhHHHHHHC--CCCEEEecchHHHH--HHHHHHHHHHHHHh
Q 018508 269 AEKGVLGGGKA---YLAG-FAMPHDAPLEMKSR--GYHMVSGAVDVGLF--RSAAVEDVARFKMN 325 (355)
Q Consensus 269 iv~aa~a~g~~---~~g~-~~~d~~~a~~~~~~--G~~~vs~~~D~~ll--~~~~~~~~~~~r~~ 325 (355)
+++++++-... .|++ .-.+++++...+++ |.+++..++-+.-+ .+++++.+..||..
T Consensus 217 i~~a~~~vnpdvivLc~gGpIstpeDv~~~l~~t~G~~G~~gASsier~p~e~ai~~~~~~fk~~ 281 (286)
T 2p10_A 217 CIEAARTIRDDIIILSHGGPIANPEDARFILDSCQGCHGFYGASSMERLPAEEAIRSQTLAFKAI 281 (286)
T ss_dssp HHHHHHHHCSCCEEEEESTTCCSHHHHHHHHHHCTTCCEEEESHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHhCCCcEEEecCCCCCCHHHHHHHHhcCCCccEEEeehhhhcCCHHHHHHHHHHHHHhc
Confidence 77888775432 3443 55678999999999 99999888766544 56667777777764
No 83
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=93.82 E-value=4.9 Score=38.54 Aligned_cols=203 Identities=14% Similarity=0.204 Sum_probs=118.0
Q ss_pred chHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeC----------CCC-CCCHHHHHHHHHHH-HhC-CCCeE
Q 018508 73 PESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDM----------EHG-PGGISDALACLHAL-AAT-GTPAI 139 (355)
Q Consensus 73 ~n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDl----------Eh~-~~~~~~a~~~i~a~-~~~-g~~~i 139 (355)
...||++++.|++++. .+.-+...+.++..+|||.|++-- .|. +.+.+++...++.+ +.. ..+++
T Consensus 28 ~~~lr~l~~~~~~i~~--~~ayD~~sA~i~e~aGfdai~vs~~~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~~~Pvi 105 (318)
T 1zlp_A 28 KTTMHRLIEEHGSVLM--PGVQDALSAAVVEKTGFHAAFVSGYSVSAAMLGLPDFGLLTTTEVVEATRRITAAAPNLCVV 105 (318)
T ss_dssp CCHHHHHHHHSSSEEE--EEECSHHHHHHHHHTTCSEEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHHHSSSSEEE
T ss_pred HHHHHHHHhCCCcEEE--ecCCCHHHHHHHHHcCCCEEEECcHHHhhHhcCCCCCCCCCHHHHHHHHHHHHhhccCCCEE
Confidence 4679999999988543 446688888888889999998742 221 35667766666654 344 66777
Q ss_pred EcCCCC--CHH----HHHHHHhcCCCeEee-----cCC---------CCHHH----HHHHHHHcCCCCCCCCCCcccccc
Q 018508 140 LRLPES--CPT----WAKKALDLGPQGVMF-----PMI---------DSPEA----AKEAVSYCRFPPSGVRGSAHTVVR 195 (355)
Q Consensus 140 VRV~~~--~~~----~i~~aLdaGa~GImv-----P~V---------esaee----a~~vv~a~~~pP~G~Rg~g~~~~r 195 (355)
|=.+.. ++. .++++.++|+.||.+ |++ -+.++ ++.++++..
T Consensus 106 aD~d~Gyg~~~~v~~tv~~l~~aGaagv~iED~~~~k~cgH~~gk~L~p~~e~~~rI~Aa~~A~~--------------- 170 (318)
T 1zlp_A 106 VDGDTGGGGPLNVQRFIRELISAGAKGVFLEDQVWPKKCGHMRGKAVVPAEEHALKIAAAREAIG--------------- 170 (318)
T ss_dssp EECTTCSSSHHHHHHHHHHHHHTTCCEEEEECBCSSCCCSSSSCCCBCCHHHHHHHHHHHHHHHT---------------
T ss_pred EeCCCCCCCHHHHHHHHHHHHHcCCcEEEECCCCCCccccCCCCCccCCHHHHHHHHHHHHHhcc---------------
Confidence 776654 333 357788899987654 221 12222 223333322
Q ss_pred cccCCCCccccccCCCceEEEEEEccH------HHHHHHHHHhccCCccEEEEChhhHHhhcCCCCCCCCHHHHHHHHHH
Q 018508 196 ASGYGIDEGYLSNYEEELLIMCQVESE------EGVKRAEDIAAVDGVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVA 269 (355)
Q Consensus 196 a~~~g~~~~y~~~~n~~i~vi~mIET~------~av~nieeIaavpgVD~l~iGp~DLs~slG~~~~~~~p~v~~ai~~i 269 (355)
.....|++-.|.. ++++.+....+ -|.|+||+=. . + .++. ++++
T Consensus 171 --------------~~~~~I~ARtda~a~~gl~~ai~Ra~Ay~e-AGAd~i~~e~--------~---~-~~e~---~~~i 220 (318)
T 1zlp_A 171 --------------DSDFFLVARTDARAPHGLEEGIRRANLYKE-AGADATFVEA--------P---A-NVDE---LKEV 220 (318)
T ss_dssp --------------TSCCEEEEEECTHHHHHHHHHHHHHHHHHH-TTCSEEEECC--------C---C-SHHH---HHHH
T ss_pred --------------cCCcEEEEeeHHhhhcCHHHHHHHHHHHHH-cCCCEEEEcC--------C---C-CHHH---HHHH
Confidence 1235677777764 35555555554 3899999821 1 1 2222 2333
Q ss_pred HHHHHhCCCceeeccc---C-CchhHHHHHHCCCCEEEecchHH-HHHHHHHHHHHHHHHh
Q 018508 270 EKGVLGGGKAYLAGFA---M-PHDAPLEMKSRGYHMVSGAVDVG-LFRSAAVEDVARFKMN 325 (355)
Q Consensus 270 v~aa~a~g~~~~g~~~---~-d~~~a~~~~~~G~~~vs~~~D~~-ll~~~~~~~~~~~r~~ 325 (355)
.++. .++....+. . ..-..+++.++||+.++++.-.. ....++.+.+..++..
T Consensus 221 ~~~l---~~P~lan~~~~g~~~~~~~~eL~~lGv~~v~~~~~~~raa~~a~~~~~~~l~~~ 278 (318)
T 1zlp_A 221 SAKT---KGLRIANMIEGGKTPLHTPEEFKEMGFHLIAHSLTAVYATARALVNIMKILKEK 278 (318)
T ss_dssp HHHS---CSEEEEEECTTSSSCCCCHHHHHHHTCCEEEECSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhc---CCCEEEEeccCCCCCCCCHHHHHHcCCeEEEEchHHHHHHHHHHHHHHHHHHHc
Confidence 3322 344322221 1 12346788999999999997653 2334444555555554
No 84
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=93.77 E-value=3.1 Score=36.13 Aligned_cols=169 Identities=15% Similarity=0.160 Sum_probs=92.7
Q ss_pred HHHHcCCcEEEEEEecCCHH----HHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHh-CCCCeEEcC-CCCCHHHHH
Q 018508 78 YRLQSNETLYGLFLLSFSPT----LAEISGLAGYDFVVVDMEHGPGGISDALACLHALAA-TGTPAILRL-PESCPTWAK 151 (355)
Q Consensus 78 ~~L~~G~~~~gl~v~~~sp~----~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~-~g~~~iVRV-~~~~~~~i~ 151 (355)
++|.. .+++..... .+++ .++.+...|+|++-+.++- + ... +.++.++. .+...+|-+ .-.++..+.
T Consensus 5 ~~~~~-~~~i~~~~~-~~~~~~~~~~~~~~~~G~~~iev~~~~-~-~~~---~~i~~ir~~~~~~~~ig~~~v~~~~~~~ 77 (205)
T 1wa3_A 5 ELFKK-HKIVAVLRA-NSVEEAKEKALAVFEGGVHLIEITFTV-P-DAD---TVIKELSFLKEKGAIIGAGTVTSVEQCR 77 (205)
T ss_dssp HHHHH-HCEEEEECC-SSHHHHHHHHHHHHHTTCCEEEEETTS-T-THH---HHHHHTHHHHHTTCEEEEESCCSHHHHH
T ss_pred HHHhh-CCEEEEEec-CCHHHHHHHHHHHHHCCCCEEEEeCCC-h-hHH---HHHHHHHHHCCCCcEEEecccCCHHHHH
Confidence 34432 455555433 3333 4566677899999998774 2 222 22333221 122233444 224677889
Q ss_pred HHHhcCCCeEeecCCCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEEccHHHHHHHHHH
Q 018508 152 KALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKRAEDI 231 (355)
Q Consensus 152 ~aLdaGa~GImvP~Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mIET~~av~nieeI 231 (355)
.+.++|++.|+.|... . .+++.++.. .+.+++-+-|++=+..+
T Consensus 78 ~a~~~Gad~iv~~~~~-~----~~~~~~~~~-----------------------------g~~vi~g~~t~~e~~~a--- 120 (205)
T 1wa3_A 78 KAVESGAEFIVSPHLD-E----EISQFCKEK-----------------------------GVFYMPGVMTPTELVKA--- 120 (205)
T ss_dssp HHHHHTCSEEECSSCC-H----HHHHHHHHH-----------------------------TCEEECEECSHHHHHHH---
T ss_pred HHHHcCCCEEEcCCCC-H----HHHHHHHHc-----------------------------CCcEECCcCCHHHHHHH---
Confidence 9999999999777754 2 344444310 13455555576543332
Q ss_pred hccCCccEEEEChhhHHhhcCCCCCCCCHHHHHHHHHHHHHHHhC-CCc--eeecccCCchhHHHHHHCCCCEEEecchH
Q 018508 232 AAVDGVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVAEKGVLGG-GKA--YLAGFAMPHDAPLEMKSRGYHMVSGAVDV 308 (355)
Q Consensus 232 aavpgVD~l~iGp~DLs~slG~~~~~~~p~v~~ai~~iv~aa~a~-g~~--~~g~~~~d~~~a~~~~~~G~~~vs~~~D~ 308 (355)
.. -|+|.+-+-+..+. | + ..+.++.. .. +.+ ..||+ +++.+..+++.|++.+.+|+-.
T Consensus 121 ~~-~Gad~vk~~~~~~~---g-------~---~~~~~l~~---~~~~~pvia~GGI--~~~~~~~~~~~Ga~~v~vGs~i 181 (205)
T 1wa3_A 121 MK-LGHTILKLFPGEVV---G-------P---QFVKAMKG---PFPNVKFVPTGGV--NLDNVCEWFKAGVLAVGVGSAL 181 (205)
T ss_dssp HH-TTCCEEEETTHHHH---H-------H---HHHHHHHT---TCTTCEEEEBSSC--CTTTHHHHHHHTCSCEEECHHH
T ss_pred HH-cCCCEEEEcCcccc---C-------H---HHHHHHHH---hCCCCcEEEcCCC--CHHHHHHHHHCCCCEEEECccc
Confidence 11 37888877553321 1 1 12222221 12 333 24555 3678899999999999999754
Q ss_pred H
Q 018508 309 G 309 (355)
Q Consensus 309 ~ 309 (355)
.
T Consensus 182 ~ 182 (205)
T 1wa3_A 182 V 182 (205)
T ss_dssp H
T ss_pred c
Confidence 3
No 85
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=93.77 E-value=0.33 Score=45.18 Aligned_cols=87 Identities=16% Similarity=0.029 Sum_probs=58.7
Q ss_pred HHHHHHhhhcCCcEEEEeCC-CC----CCCHHHHHHHHHHHHhC----CCC--eEEcCCCC--------C--HHHH---H
Q 018508 96 PTLAEISGLAGYDFVVVDME-HG----PGGISDALACLHALAAT----GTP--AILRLPES--------C--PTWA---K 151 (355)
Q Consensus 96 p~~~e~aa~~G~D~vilDlE-h~----~~~~~~a~~~i~a~~~~----g~~--~iVRV~~~--------~--~~~i---~ 151 (355)
-+.+..+..+|++.|-|.=. |. ..+.++..+.|+++... |.+ ++-|+... + ...| +
T Consensus 96 ~~~~~~l~~aGa~gv~iEd~~~~~~k~l~~~~e~~~~I~a~~~a~~~~g~~~~v~aRtd~~~~g~~~~~~~~~~ai~ra~ 175 (255)
T 2qiw_A 96 ADLIAQILEAGAVGINVEDVVHSEGKRVREAQEHADYIAAARQAADVAGVDVVINGRTDAVKLGADVFEDPMVEAIKRIK 175 (255)
T ss_dssp HHHHHHHHHTTCCEEEECSEEGGGTTEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECHHHHCTTTSSSHHHHHHHHHH
T ss_pred HHHHHHHHHcCCcEEEECCCCCCCCCcccCHHHHHHHHHHHHHHHHhcCCCeEEEEEechhhccCCcchHHHHHHHHHHH
Confidence 45566677799998876433 22 24456666666665433 666 67787631 1 1223 4
Q ss_pred HHHhcCCCeEeecCCCCHHHHHHHHHHcCCC
Q 018508 152 KALDLGPQGVMFPMIDSPEAAKEAVSYCRFP 182 (355)
Q Consensus 152 ~aLdaGa~GImvP~Vesaeea~~vv~a~~~p 182 (355)
...++||++|++|.+.+.++++++.+.+..|
T Consensus 176 a~~eAGAd~i~~e~~~~~~~~~~i~~~~~~P 206 (255)
T 2qiw_A 176 LMEQAGARSVYPVGLSTAEQVERLVDAVSVP 206 (255)
T ss_dssp HHHHHTCSEEEECCCCSHHHHHHHHTTCSSC
T ss_pred HHHHcCCcEEEEcCCCCHHHHHHHHHhCCCC
Confidence 5668999999999999999999999887643
No 86
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=93.71 E-value=0.34 Score=47.42 Aligned_cols=78 Identities=17% Similarity=0.107 Sum_probs=52.7
Q ss_pred CCcEEEEEEec--CCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHh-C-CCCeEEcCCCCCHHHHHHHHhcCC
Q 018508 83 NETLYGLFLLS--FSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAA-T-GTPAILRLPESCPTWAKKALDLGP 158 (355)
Q Consensus 83 G~~~~gl~v~~--~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~-~-g~~~iVRV~~~~~~~i~~aLdaGa 158 (355)
+.-.+++-+.. ...+.++.+...|+|+|+||.-|+.. +...+.++.++. . +.++++- +-.....++++.++|+
T Consensus 95 ~~l~vga~vg~~~~~~~~~~~lieaGvd~I~idta~G~~--~~~~~~I~~ik~~~p~v~Vi~G-~v~t~e~A~~a~~aGA 171 (366)
T 4fo4_A 95 GGLRVGAAVGAAPGNEERVKALVEAGVDVLLIDSSHGHS--EGVLQRIRETRAAYPHLEIIGG-NVATAEGARALIEAGV 171 (366)
T ss_dssp TSCCCEEECCSCTTCHHHHHHHHHTTCSEEEEECSCTTS--HHHHHHHHHHHHHCTTCEEEEE-EECSHHHHHHHHHHTC
T ss_pred CceeEEEEeccChhHHHHHHHHHhCCCCEEEEeCCCCCC--HHHHHHHHHHHHhcCCCceEee-eeCCHHHHHHHHHcCC
Confidence 33344444332 34678899999999999999988743 344455555543 2 4454442 2345778899999999
Q ss_pred CeEee
Q 018508 159 QGVMF 163 (355)
Q Consensus 159 ~GImv 163 (355)
++|.+
T Consensus 172 D~I~v 176 (366)
T 4fo4_A 172 SAVKV 176 (366)
T ss_dssp SEEEE
T ss_pred CEEEE
Confidence 99999
No 87
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=93.62 E-value=1.8 Score=34.77 Aligned_cols=105 Identities=9% Similarity=0.051 Sum_probs=66.5
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKA 153 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~a 153 (355)
..+++.|......+-+..-.+..+..+.+....+|.|++|+.-...+--++...++.. ....++++=....+...+.++
T Consensus 34 ~~l~~~L~~~~~~~~v~~~~~~~~al~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~-~~~~~ii~ls~~~~~~~~~~~ 112 (150)
T 4e7p_A 34 DAMCQLLTLQPDVESVLQAKNGQEAIQLLEKESVDIAILDVEMPVKTGLEVLEWIRSE-KLETKVVVVTTFKRAGYFERA 112 (150)
T ss_dssp HHHHHHHHTSTTEEEEEEESSHHHHHHHHTTSCCSEEEECSSCSSSCHHHHHHHHHHT-TCSCEEEEEESCCCHHHHHHH
T ss_pred HHHHHHHHhCCCcEEEEEECCHHHHHHHhhccCCCEEEEeCCCCCCcHHHHHHHHHHh-CCCCeEEEEeCCCCHHHHHHH
Confidence 3566677654333334433444556677778889999999987654433333333331 223445555555667788899
Q ss_pred HhcCCCeEeecCCCCHHHHHHHHHHcC
Q 018508 154 LDLGPQGVMFPMIDSPEAAKEAVSYCR 180 (355)
Q Consensus 154 LdaGa~GImvP~Vesaeea~~vv~a~~ 180 (355)
+..|+++++. +=-+.+++...++.+.
T Consensus 113 ~~~g~~~~l~-Kp~~~~~l~~~i~~~~ 138 (150)
T 4e7p_A 113 VKAGVDAYVL-KERSIADLMQTLHTVL 138 (150)
T ss_dssp HHTTCSEEEE-TTSCHHHHHHHHHHHH
T ss_pred HHCCCcEEEe-cCCCHHHHHHHHHHHH
Confidence 9999998765 3347888887776653
No 88
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=93.62 E-value=1.5 Score=38.15 Aligned_cols=159 Identities=10% Similarity=0.040 Sum_probs=83.7
Q ss_pred HHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHh-C-CCCeEE--cCCCCCHH-HHHHHHhcCCCeEeecCCCCHHHHHH
Q 018508 100 EISGLAGYDFVVVDMEHGPGGISDALACLHALAA-T-GTPAIL--RLPESCPT-WAKKALDLGPQGVMFPMIDSPEAAKE 174 (355)
Q Consensus 100 e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~-~-g~~~iV--RV~~~~~~-~i~~aLdaGa~GImvP~Vesaeea~~ 174 (355)
+.+.. |.|++=+-+.+. .......++.++. . +.+.++ -+.+. +. .+..+.++|+++|.++-....+.++.
T Consensus 20 ~~~~~-~v~~iev~~~~~---~~~g~~~i~~l~~~~~~~~i~~~l~~~di-~~~~~~~a~~~Gad~v~vh~~~~~~~~~~ 94 (207)
T 3ajx_A 20 GKVAE-YVDIIELGTPLI---KAEGLSVITAVKKAHPDKIVFADMKTMDA-GELEADIAFKAGADLVTVLGSADDSTIAG 94 (207)
T ss_dssp HHHGG-GCSEEEECHHHH---HHHCTHHHHHHHHHSTTSEEEEEEEECSC-HHHHHHHHHHTTCSEEEEETTSCHHHHHH
T ss_pred HHhhc-cCCEEEECcHHH---HhhCHHHHHHHHHhCCCCeEEEEEEecCc-cHHHHHHHHhCCCCEEEEeccCChHHHHH
Confidence 44444 667744422221 1222234544443 2 444443 44432 33 47889999999999876666677777
Q ss_pred HHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEE---ccHHH-HHHHHHHhccCCccEEEEChhhHHhh
Q 018508 175 AVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQV---ESEEG-VKRAEDIAAVDGVDCVQMGPLDLSAS 250 (355)
Q Consensus 175 vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mI---ET~~a-v~nieeIaavpgVD~l~iGp~DLs~s 250 (355)
+++.++.. | ..+++-+ .|+.- +..+.+ . ++|.|-+++.-....
T Consensus 95 ~~~~~~~~--g---------------------------~~~gv~~~s~~~p~~~~~~~~~---~-g~d~v~~~~~~~~~~ 141 (207)
T 3ajx_A 95 AVKAAQAH--N---------------------------KGVVVDLIGIEDKATRAQEVRA---L-GAKFVEMHAGLDEQA 141 (207)
T ss_dssp HHHHHHHH--T---------------------------CEEEEECTTCSSHHHHHHHHHH---T-TCSEEEEECCHHHHT
T ss_pred HHHHHHHc--C---------------------------CceEEEEecCCChHHHHHHHHH---h-CCCEEEEEecccccc
Confidence 77776420 1 1133322 24443 333333 2 688884443333444
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHHHhCCCc--eeecccCCchhHHHHHHCCCCEEEecchH
Q 018508 251 MGYLWDPGHRKVREMMRVAEKGVLGGGKA--YLAGFAMPHDAPLEMKSRGYHMVSGAVDV 308 (355)
Q Consensus 251 lG~~~~~~~p~v~~ai~~iv~aa~a~g~~--~~g~~~~d~~~a~~~~~~G~~~vs~~~D~ 308 (355)
.|.. + .+ +.+++ .+.. ..+ +.||+ +++.++.+++.|.+.+++|+-+
T Consensus 142 ~g~~--~-~~---~~i~~---~~~~-~~pi~v~GGI--~~~~~~~~~~aGad~vvvGsaI 189 (207)
T 3ajx_A 142 KPGF--D-LN---GLLAA---GEKA-RVPFSVAGGV--KVATIPAVQKAGAEVAVAGGAI 189 (207)
T ss_dssp STTC--C-TH---HHHHH---HHHH-TSCEEEESSC--CGGGHHHHHHTTCSEEEESHHH
T ss_pred cCCC--c-hH---HHHHH---hhCC-CCCEEEECCc--CHHHHHHHHHcCCCEEEEeeec
Confidence 4432 1 11 22222 2221 333 33444 4678888999999999999765
No 89
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=93.62 E-value=3.6 Score=36.31 Aligned_cols=83 Identities=14% Similarity=0.148 Sum_probs=49.4
Q ss_pred CHHHHHHhhhcCCcEEEEe-CCCCCCCHHHHHHHHHHHH-hCCCCeEEcCCCCCHHHHHHHHhcCCCeEeecC--CCCHH
Q 018508 95 SPTLAEISGLAGYDFVVVD-MEHGPGGISDALACLHALA-ATGTPAILRLPESCPTWAKKALDLGPQGVMFPM--IDSPE 170 (355)
Q Consensus 95 sp~~~e~aa~~G~D~vilD-lEh~~~~~~~a~~~i~a~~-~~g~~~iVRV~~~~~~~i~~aLdaGa~GImvP~--Vesae 170 (355)
..+.++.+...|+|++.+. +.............++.+. ..+.++++=-.-.++..+..++++|+++|++.. ..+++
T Consensus 35 ~~~~a~~~~~~G~d~i~v~~~~~~~~~~~~~~~~i~~i~~~~~ipvi~~g~i~~~~~~~~~~~~Gad~V~i~~~~~~~~~ 114 (253)
T 1h5y_A 35 PVEMAVRYEEEGADEIAILDITAAPEGRATFIDSVKRVAEAVSIPVLVGGGVRSLEDATTLFRAGADKVSVNTAAVRNPQ 114 (253)
T ss_dssp HHHHHHHHHHTTCSCEEEEECCCCTTTHHHHHHHHHHHHHHCSSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHHCTH
T ss_pred HHHHHHHHHHcCCCEEEEEeCCccccCCcccHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCCEEEEChHHhhCcH
Confidence 3457788889999977554 4332223333344455443 345555543333456778899999999999764 23344
Q ss_pred HHHHHHH
Q 018508 171 AAKEAVS 177 (355)
Q Consensus 171 ea~~vv~ 177 (355)
.+.++.+
T Consensus 115 ~~~~~~~ 121 (253)
T 1h5y_A 115 LVALLAR 121 (253)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4444443
No 90
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=93.61 E-value=0.52 Score=43.21 Aligned_cols=156 Identities=16% Similarity=0.162 Sum_probs=85.1
Q ss_pred HHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHH---hCCCCeEEcCCCCC-----------HHHHHHHHhcCCCeE-
Q 018508 97 TLAEISGLAGYDFVVVDMEHGPGGISDALACLHALA---ATGTPAILRLPESC-----------PTWAKKALDLGPQGV- 161 (355)
Q Consensus 97 ~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~---~~g~~~iVRV~~~~-----------~~~i~~aLdaGa~GI- 161 (355)
..++.+...|++.|+++. . .+..+. ....+.+|.++... ...+.++++.|++.|
T Consensus 49 ~~~~~~~~~g~~~i~~~~--------~---~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~~~~~v~~a~~~Ga~~v~ 117 (273)
T 2qjg_A 49 KTVNDVAEGGANAVLLHK--------G---IVRHGHRGYGKDVGLIIHLSGGTAISPNPLKKVIVTTVEEAIRMGADAVS 117 (273)
T ss_dssp HHHHHHHHHTCSEEEECH--------H---HHHSCCCSSSCCCEEEEECEECCTTSSSTTCCEECSCHHHHHHTTCSEEE
T ss_pred HHHHHHHhcCCCEEEeCH--------H---HHHHHHHhhcCCCCEEEEEcCCCcCCCCcccchHHHHHHHHHHcCCCEEE
Confidence 356677788899888642 1 111110 12345566665433 345889999999999
Q ss_pred --eecCCCCHH----HHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEE----------ccHHHH
Q 018508 162 --MFPMIDSPE----AAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQV----------ESEEGV 225 (355)
Q Consensus 162 --mvP~Vesae----ea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mI----------ET~~av 225 (355)
+.....+.+ +++++++.|+. || +.+++.+ -|+.-+
T Consensus 118 ~~l~~~~~~~~~~~~~~~~v~~~~~~-----------------~g------------~~viv~~~~~G~~l~~~~~~~~~ 168 (273)
T 2qjg_A 118 IHVNVGSDEDWEAYRDLGMIAETCEY-----------------WG------------MPLIAMMYPRGKHIQNERDPELV 168 (273)
T ss_dssp EEEEETSTTHHHHHHHHHHHHHHHHH-----------------HT------------CCEEEEEEECSTTCSCTTCHHHH
T ss_pred EEEecCCCCHHHHHHHHHHHHHHHHH-----------------cC------------CCEEEEeCCCCcccCCCCCHhHH
Confidence 555655544 45666666641 11 1122222 234434
Q ss_pred HHHHHHhccCCccEEEEChhhHHhhcCCCCCCCCHHHHHHHHHHHHHHHhCCCceeecccCC-chh----HHHHHHCCCC
Q 018508 226 KRAEDIAAVDGVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVAEKGVLGGGKAYLAGFAMP-HDA----PLEMKSRGYH 300 (355)
Q Consensus 226 ~nieeIaavpgVD~l~iGp~DLs~slG~~~~~~~p~v~~ai~~iv~aa~a~g~~~~g~~~~d-~~~----a~~~~~~G~~ 300 (355)
+.+-+++.--|+|.|.+++ + ..++ .+.++...+ .-.+...||+... .++ +..+++.|++
T Consensus 169 ~~~a~~a~~~Gad~i~~~~---------~---~~~~---~l~~i~~~~-~ipvva~GGi~~~~~~~~~~~~~~~~~~Ga~ 232 (273)
T 2qjg_A 169 AHAARLGAELGADIVKTSY---------T---GDID---SFRDVVKGC-PAPVVVAGGPKTNTDEEFLQMIKDAMEAGAA 232 (273)
T ss_dssp HHHHHHHHHTTCSEEEECC---------C---SSHH---HHHHHHHHC-SSCEEEECCSCCSSHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHcCCCEEEECC---------C---CCHH---HHHHHHHhC-CCCEEEEeCCCCCCHHHHHHHHHHHHHcCCc
Confidence 4443344345899999884 1 1222 233333332 1222246666543 444 6666789999
Q ss_pred EEEecchH
Q 018508 301 MVSGAVDV 308 (355)
Q Consensus 301 ~vs~~~D~ 308 (355)
++.+++..
T Consensus 233 gv~vg~~i 240 (273)
T 2qjg_A 233 GVAVGRNI 240 (273)
T ss_dssp EEECCHHH
T ss_pred EEEeeHHh
Confidence 99998765
No 91
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=93.29 E-value=0.49 Score=44.89 Aligned_cols=119 Identities=13% Similarity=0.105 Sum_probs=81.1
Q ss_pred HHHHhhhcCCcEEEEeCCCC----------CCCHHHHHHHHHHHHhC----CCCeEEcCCCCC----HHHH---HHHHhc
Q 018508 98 LAEISGLAGYDFVVVDMEHG----------PGGISDALACLHALAAT----GTPAILRLPESC----PTWA---KKALDL 156 (355)
Q Consensus 98 ~~e~aa~~G~D~vilDlEh~----------~~~~~~a~~~i~a~~~~----g~~~iVRV~~~~----~~~i---~~aLda 156 (355)
.+..+..+|++.|-|.=... ..+.++....|+++... +..+.-|... . ...| +...++
T Consensus 102 ~v~~l~~aGa~gv~iED~~~pKrcgh~~gkl~~~~e~~~~I~aa~~a~~~~~~~i~aRtda-a~~gl~~ai~Ra~ay~eA 180 (287)
T 3b8i_A 102 TVVELERAGIAALTIEDTLLPAQFGRKSTDLICVEEGVGKIRAALEARVDPALTIIARTNA-ELIDVDAVIQRTLAYQEA 180 (287)
T ss_dssp HHHHHHHHTCSEEEEECBCCSCCTTTCTTCBCCHHHHHHHHHHHHHHCCSTTSEEEEEEET-TTSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHhCCeEEEEcCCCCccccCCCCCCccCHHHHHHHHHHHHHcCCCCCcEEEEechh-hhcCHHHHHHHHHHHHHc
Confidence 44556679999988754422 24556666667665432 3346678765 3 2334 445689
Q ss_pred CCCeEeecCCCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEEcc-HHHHHHHHHHhccC
Q 018508 157 GPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVES-EEGVKRAEDIAAVD 235 (355)
Q Consensus 157 Ga~GImvP~Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mIET-~~av~nieeIaavp 235 (355)
||++|++|.+.+.++++++.+.+.-| ++ ++|. ....-+.+|+.+.
T Consensus 181 GAd~i~~e~~~~~~~~~~i~~~~~~P--------------------------------~i-i~~~g~~~~~~~~eL~~l- 226 (287)
T 3b8i_A 181 GADGICLVGVRDFAHLEAIAEHLHIP--------------------------------LM-LVTYGNPQLRDDARLARL- 226 (287)
T ss_dssp TCSEEEEECCCSHHHHHHHHTTCCSC--------------------------------EE-EECTTCGGGCCHHHHHHT-
T ss_pred CCCEEEecCCCCHHHHHHHHHhCCCC--------------------------------EE-EeCCCCCCCCCHHHHHHc-
Confidence 99999999999999999999876532 33 6664 3345667888876
Q ss_pred CccEEEEChhhHHhhc
Q 018508 236 GVDCVQMGPLDLSASM 251 (355)
Q Consensus 236 gVD~l~iGp~DLs~sl 251 (355)
|+..+++|..=+..++
T Consensus 227 Gv~~v~~~~~~~raa~ 242 (287)
T 3b8i_A 227 GVRVVVNGHAAYFAAI 242 (287)
T ss_dssp TEEEEECCCHHHHHHH
T ss_pred CCcEEEEChHHHHHHH
Confidence 8999999988665554
No 92
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=93.17 E-value=4.4 Score=36.01 Aligned_cols=150 Identities=17% Similarity=0.154 Sum_probs=86.8
Q ss_pred HHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCC-CCHHHHHHHHhcCCCeEeecCCCCHHHHHHH
Q 018508 97 TLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPE-SCPTWAKKALDLGPQGVMFPMIDSPEAAKEA 175 (355)
Q Consensus 97 ~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~-~~~~~i~~aLdaGa~GImvP~Vesaeea~~v 175 (355)
..++.+...|.++|=+.+-. ....+.++.++. ....+...- .....+..++++|+++|+.|.. +. ++.+.
T Consensus 29 ~~~~~l~~gGv~~iel~~k~-----~~~~~~i~~~~~--~~~~~gag~vl~~d~~~~A~~~GAd~v~~~~~-d~-~v~~~ 99 (207)
T 2yw3_A 29 GLARVLEEEGVGALEITLRT-----EKGLEALKALRK--SGLLLGAGTVRSPKEAEAALEAGAAFLVSPGL-LE-EVAAL 99 (207)
T ss_dssp HHHHHHHHTTCCEEEEECSS-----THHHHHHHHHTT--SSCEEEEESCCSHHHHHHHHHHTCSEEEESSC-CH-HHHHH
T ss_pred HHHHHHHHcCCCEEEEeCCC-----hHHHHHHHHHhC--CCCEEEeCeEeeHHHHHHHHHcCCCEEEcCCC-CH-HHHHH
Confidence 46788888899999888543 233455554444 222222221 2357889999999999999964 33 33222
Q ss_pred HHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEEccHHHHHHHHHHhccCCccEEEEChhhHHhhcCCCC
Q 018508 176 VSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKRAEDIAAVDGVDCVQMGPLDLSASMGYLW 255 (355)
Q Consensus 176 v~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mIET~~av~nieeIaavpgVD~l~iGp~DLs~slG~~~ 255 (355)
.+... +.+++-+.|++=+..+.+ .|.|.|-+-| .
T Consensus 100 ~~~~g--------------------------------~~~i~G~~t~~e~~~A~~----~Gad~v~~fp----------a 133 (207)
T 2yw3_A 100 AQARG--------------------------------VPYLPGVLTPTEVERALA----LGLSALKFFP----------A 133 (207)
T ss_dssp HHHHT--------------------------------CCEEEEECSHHHHHHHHH----TTCCEEEETT----------T
T ss_pred HHHhC--------------------------------CCEEecCCCHHHHHHHHH----CCCCEEEEec----------C
Confidence 22211 123444778765555443 2789887744 1
Q ss_pred CCC-CHHHHHHHHHHHHHHHhCCCce--eecccCCchhHHHHHHCCCCEEEecchH
Q 018508 256 DPG-HRKVREMMRVAEKGVLGGGKAY--LAGFAMPHDAPLEMKSRGYHMVSGAVDV 308 (355)
Q Consensus 256 ~~~-~p~v~~ai~~iv~aa~a~g~~~--~g~~~~d~~~a~~~~~~G~~~vs~~~D~ 308 (355)
... .++.+ +.+.... .++++ +||+ +.+.+..+++.|...+.+++..
T Consensus 134 ~~~gG~~~l---k~l~~~~--~~ipvvaiGGI--~~~n~~~~l~aGa~~vavgSai 182 (207)
T 2yw3_A 134 EPFQGVRVL---RAYAEVF--PEVRFLPTGGI--KEEHLPHYAALPNLLAVGGSWL 182 (207)
T ss_dssp TTTTHHHHH---HHHHHHC--TTCEEEEBSSC--CGGGHHHHHTCSSBSCEEESGG
T ss_pred ccccCHHHH---HHHHhhC--CCCcEEEeCCC--CHHHHHHHHhCCCcEEEEehhh
Confidence 111 23332 2221111 14443 4444 4688999999999999888764
No 93
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=93.13 E-value=1.5 Score=34.08 Aligned_cols=104 Identities=8% Similarity=-0.033 Sum_probs=63.4
Q ss_pred hHHHHHHHcCCcEEEEEEecCCH-HHHHHhhh-------cCCcEEEEeCCCCCCCHHHHHHHHHHHH-hCCCCeEEcCCC
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSP-TLAEISGL-------AGYDFVVVDMEHGPGGISDALACLHALA-ATGTPAILRLPE 144 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp-~~~e~aa~-------~G~D~vilDlEh~~~~~~~a~~~i~a~~-~~g~~~iVRV~~ 144 (355)
..+++.|..-...+-+. ...+. +..+.+.. ..+|.|++|++-...+--++...++... ....++++=...
T Consensus 16 ~~l~~~L~~~~~~~~v~-~~~~~~~a~~~l~~~~~~~~~~~~dlvi~d~~~~~~~g~~~~~~l~~~~~~~~~pii~ls~~ 94 (140)
T 1k68_A 16 RLIQEALANSTVPHEVV-TVRDGMEAMAYLRQEGEYANASRPDLILLXLNLPKKDGREVLAEIKSDPTLKRIPVVVLSTS 94 (140)
T ss_dssp HHHHHHHHTCSSCCEEE-EECSHHHHHHHHTTCGGGGSCCCCSEEEECSSCSSSCHHHHHHHHHHSTTGGGSCEEEEESC
T ss_pred HHHHHHHHhcCCCceEE-EECCHHHHHHHHHcccccccCCCCcEEEEecCCCcccHHHHHHHHHcCcccccccEEEEecC
Confidence 45677776543311222 23344 44555555 5799999999876544334434443321 134556665666
Q ss_pred CCHHHHHHHHhcCCCeEeecCCCCHHHHHHHHHHc
Q 018508 145 SCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYC 179 (355)
Q Consensus 145 ~~~~~i~~aLdaGa~GImvP~Vesaeea~~vv~a~ 179 (355)
.+...+..+++.|+++++ ++--+.+++...++.+
T Consensus 95 ~~~~~~~~~~~~g~~~~l-~kP~~~~~l~~~i~~~ 128 (140)
T 1k68_A 95 INEDDIFHSYDLHVNCYI-TKSANLSQLFQIVKGI 128 (140)
T ss_dssp CCHHHHHHHHHTTCSEEE-ECCSSHHHHHHHHHHH
T ss_pred CcHHHHHHHHHhchhhee-cCCCCHHHHHHHHHHH
Confidence 677788899999999864 5555788887766654
No 94
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=93.06 E-value=4.5 Score=35.89 Aligned_cols=194 Identities=17% Similarity=0.143 Sum_probs=102.1
Q ss_pred hHHHHHHHcCCcEEEEEEecC------C----HHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHh-CCCCeE--E
Q 018508 74 ESLKYRLQSNETLYGLFLLSF------S----PTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAA-TGTPAI--L 140 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~------s----p~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~-~g~~~i--V 140 (355)
+.+.++| .++....+..... . .+.++.+...|++++.+| + .+ .++.++. .+.+.+ +
T Consensus 8 ~~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~~~~~a~~~~~~G~~~i~~~---~---~~----~i~~i~~~~~~p~i~~~ 76 (234)
T 1yxy_A 8 EKLMEQL-KGGIIVSCQALPGEPLYSETGGIMPLMAKAAQEAGAVGIRAN---S---VR----DIKEIQAITDLPIIGII 76 (234)
T ss_dssp HHHHHHH-TTSCEEECCCCTTSTTCCTTCCSHHHHHHHHHHHTCSEEEEE---S---HH----HHHHHHTTCCSCEEEEC
T ss_pred HHHHHHH-hCCEEEEeeCCCCCCCcCCccchHHHHHHHHHHCCCcEeecC---C---HH----HHHHHHHhCCCCEEeeE
Confidence 4577788 6666665555441 2 346777888999999887 1 22 2333332 344431 1
Q ss_pred cC--CC------CCHHHHHHHHhcCCCeEeecCCCC--H--HHHHHHHHHcCCCCCCCCCCcccccccccCCCCcccccc
Q 018508 141 RL--PE------SCPTWAKKALDLGPQGVMFPMIDS--P--EAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSN 208 (355)
Q Consensus 141 RV--~~------~~~~~i~~aLdaGa~GImvP~Ves--a--eea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~ 208 (355)
|- ++ ....++..++++|++.|.+..... + +.+.++++.++.. +
T Consensus 77 ~~~~~~~~~~i~~~~~~i~~~~~~Gad~V~l~~~~~~~~~~~~~~~~i~~i~~~----------------~--------- 131 (234)
T 1yxy_A 77 KKDYPPQEPFITATMTEVDQLAALNIAVIAMDCTKRDRHDGLDIASFIRQVKEK----------------Y--------- 131 (234)
T ss_dssp BCCCTTSCCCBSCSHHHHHHHHTTTCSEEEEECCSSCCTTCCCHHHHHHHHHHH----------------C---------
T ss_pred cCCCCccccccCChHHHHHHHHHcCCCEEEEcccccCCCCCccHHHHHHHHHHh----------------C---------
Confidence 21 11 124578999999999998843311 1 1223333333210 0
Q ss_pred CCCceEEEEEEccHHHHHHHHHHhccCCccEE---EEChhhHHhhcCCCCCCCCHHHHHHHHHHHHHHHhCCCce--eec
Q 018508 209 YEEELLIMCQVESEEGVKRAEDIAAVDGVDCV---QMGPLDLSASMGYLWDPGHRKVREMMRVAEKGVLGGGKAY--LAG 283 (355)
Q Consensus 209 ~n~~i~vi~mIET~~av~nieeIaavpgVD~l---~iGp~DLs~slG~~~~~~~p~v~~ai~~iv~aa~a~g~~~--~g~ 283 (355)
....+++-+.|++-+..+. ..|+|.| +.|.++ ...+. ..+.+ +.+.++.. . ++++ .||
T Consensus 132 --~~~~v~~~~~t~~ea~~a~----~~Gad~i~~~v~g~~~--~~~~~----~~~~~-~~i~~~~~---~-~ipvia~GG 194 (234)
T 1yxy_A 132 --PNQLLMADISTFDEGLVAH----QAGIDFVGTTLSGYTP--YSRQE----AGPDV-ALIEALCK---A-GIAVIAEGK 194 (234)
T ss_dssp --TTCEEEEECSSHHHHHHHH----HTTCSEEECTTTTSST--TSCCS----SSCCH-HHHHHHHH---T-TCCEEEESC
T ss_pred --CCCeEEEeCCCHHHHHHHH----HcCCCEEeeeccccCC--CCcCC----CCCCH-HHHHHHHh---C-CCCEEEECC
Confidence 0134566666765533322 2478988 344433 11111 11111 22333322 2 4443 333
Q ss_pred ccCCchhHHHHHHCCCCEEEecchHHHHHHHHHHHHHHHHHh
Q 018508 284 FAMPHDAPLEMKSRGYHMVSGAVDVGLFRSAAVEDVARFKMN 325 (355)
Q Consensus 284 ~~~d~~~a~~~~~~G~~~vs~~~D~~ll~~~~~~~~~~~r~~ 325 (355)
+ .+++.+..+++.|++.+.+|+- ++. -...+..++..
T Consensus 195 I-~s~~~~~~~~~~Gad~v~vGsa--l~~--p~~~~~~l~~~ 231 (234)
T 1yxy_A 195 I-HSPEEAKKINDLGVAGIVVGGA--ITR--PKEIAERFIEA 231 (234)
T ss_dssp C-CSHHHHHHHHTTCCSEEEECHH--HHC--HHHHHHHHHHH
T ss_pred C-CCHHHHHHHHHCCCCEEEEchH--HhC--hHHHHHHHHHH
Confidence 3 3578899999999999999973 333 33444555543
No 95
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=93.05 E-value=6.1 Score=37.30 Aligned_cols=208 Identities=15% Similarity=0.166 Sum_probs=119.1
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeC-----CCC-----CCCHHHHHHHHHHHH-hCCCCeEEcC
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDM-----EHG-----PGGISDALACLHALA-ATGTPAILRL 142 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDl-----Eh~-----~~~~~~a~~~i~a~~-~~g~~~iVRV 142 (355)
..||++++.|++++ ..+.-+...+.++..+|||.|++-- -++ +.+.+++...++.+. ....+++|=.
T Consensus 5 ~~lr~l~~~~~~i~--~~~a~D~~sA~~~~~aG~~ai~vs~~~~a~~~G~pD~~~vt~~em~~~~~~I~~~~~~PviaD~ 82 (290)
T 2hjp_A 5 QALRAALDSGRLFT--AMAAHNPLVAKLAEQAGFGGIWGSGFELSASYAVPDANILSMSTHLEMMRAIASTVSIPLIADI 82 (290)
T ss_dssp HHHHHHHHHCCCEE--EEECSSHHHHHHHHHHTCSEEEECHHHHHHHTTSCTTTCSCHHHHHHHHHHHHTTCSSCEEEEC
T ss_pred HHHHHHHhCCCcEE--EecCCCHHHHHHHHHcCCCEEEEChHHHHHhCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEC
Confidence 57999999998854 3456788888888899999999861 133 356777777666654 4556666666
Q ss_pred CCC--CHH----HHHHHHhcCCCeEee-----cCC-----------CCHHH-HHHHHHHcCCCCCCCCCCcccccccccC
Q 018508 143 PES--CPT----WAKKALDLGPQGVMF-----PMI-----------DSPEA-AKEAVSYCRFPPSGVRGSAHTVVRASGY 199 (355)
Q Consensus 143 ~~~--~~~----~i~~aLdaGa~GImv-----P~V-----------esaee-a~~vv~a~~~pP~G~Rg~g~~~~ra~~~ 199 (355)
+.. ++. .++++.++|+.||.+ |++ -+.++ +.++..+..-.
T Consensus 83 d~Gyg~~~~~~~~v~~l~~aGa~gv~iED~~~~k~cgH~~~~~k~l~p~~e~~~kI~Aa~~a~----------------- 145 (290)
T 2hjp_A 83 DTGFGNAVNVHYVVPQYEAAGASAIVMEDKTFPKDTSLRTDGRQELVRIEEFQGKIAAATAAR----------------- 145 (290)
T ss_dssp TTTTSSHHHHHHHHHHHHHHTCSEEEEECBCSSCCC-------CCBCCHHHHHHHHHHHHHHC-----------------
T ss_pred CCCCCCHHHHHHHHHHHHHhCCeEEEEcCCCCCccccccccCCCcccCHHHHHHHHHHHHHhc-----------------
Confidence 544 333 357788899987764 321 12222 33333222110
Q ss_pred CCCccccccCCCceEEEEEEcc-------HHHHHHHHHHhccCCccEEEEChhhHHhhcCCCCCCCCHHHHHHHHHHHHH
Q 018508 200 GIDEGYLSNYEEELLIMCQVES-------EEGVKRAEDIAAVDGVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVAEKG 272 (355)
Q Consensus 200 g~~~~y~~~~n~~i~vi~mIET-------~~av~nieeIaavpgVD~l~iGp~DLs~slG~~~~~~~p~v~~ai~~iv~a 272 (355)
......|++-.|. .++++.+....+ -|.|+||+=. +. +..+++ .++.++
T Consensus 146 ---------~~~~~~i~aRtda~~a~~g~~~ai~Ra~ay~e-AGAd~i~~e~-------~~---~~~~~~----~~i~~~ 201 (290)
T 2hjp_A 146 ---------ADRDFVVIARVEALIAGLGQQEAVRRGQAYEE-AGADAILIHS-------RQ---KTPDEI----LAFVKS 201 (290)
T ss_dssp ---------SSTTSEEEEEECTTTTTCCHHHHHHHHHHHHH-TTCSEEEECC-------CC---SSSHHH----HHHHHH
T ss_pred ---------ccCCcEEEEeehHhhccccHHHHHHHHHHHHH-cCCcEEEeCC-------CC---CCHHHH----HHHHHH
Confidence 0123455666654 367777777764 3899999821 01 111222 333333
Q ss_pred HHhCCCceeeccc-CCchhHHHHHHCC-CCEEEecchHH-HHHHHHHHHHHHHHHh
Q 018508 273 VLGGGKAYLAGFA-MPHDAPLEMKSRG-YHMVSGAVDVG-LFRSAAVEDVARFKMN 325 (355)
Q Consensus 273 a~a~g~~~~g~~~-~d~~~a~~~~~~G-~~~vs~~~D~~-ll~~~~~~~~~~~r~~ 325 (355)
.. ..++.+..+. ...-..+++.++| |+.++++.-.. ....++.+.+..++..
T Consensus 202 ~~-~~vP~i~n~~~~~~~~~~eL~~lG~v~~v~~~~~~~raa~~a~~~~~~~i~~~ 256 (290)
T 2hjp_A 202 WP-GKVPLVLVPTAYPQLTEADIAALSKVGIVIYGNHAIRAAVGAVREVFARIRRD 256 (290)
T ss_dssp CC-CSSCEEECGGGCTTSCHHHHHTCTTEEEEEECSHHHHHHHHHHHHHHHHHHHH
T ss_pred cC-CCCCEEEeccCCCCCCHHHHHhcCCeeEEEechHHHHHHHHHHHHHHHHHHHc
Confidence 21 1144332221 1223467899999 99999997753 2334444455555553
No 96
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=92.99 E-value=0.81 Score=43.59 Aligned_cols=137 Identities=10% Similarity=0.002 Sum_probs=85.8
Q ss_pred HHHHhhhcCCcEEEEeCCCC-----------CCCHHHHHHHHHHHHh----CCCCeEEcCCCCCHH----HH---HHHHh
Q 018508 98 LAEISGLAGYDFVVVDMEHG-----------PGGISDALACLHALAA----TGTPAILRLPESCPT----WA---KKALD 155 (355)
Q Consensus 98 ~~e~aa~~G~D~vilDlEh~-----------~~~~~~a~~~i~a~~~----~g~~~iVRV~~~~~~----~i---~~aLd 155 (355)
.++.+..+|+..|-|.=+-. ..+.+++.+-|+++.. .+..++.|+...... .| +...+
T Consensus 103 ~v~~l~~aGaagv~iEDq~~~k~cGh~~gk~l~~~~e~~~ri~Aa~~A~~~~~~~I~ARTDa~~~~gldeai~Ra~ay~~ 182 (298)
T 3eoo_A 103 TIRSFIKAGVGAVHLEDQVGQKRCGHRPGKECVPAGEMVDRIKAAVDARTDETFVIMARTDAAAAEGIDAAIERAIAYVE 182 (298)
T ss_dssp HHHHHHHTTCSEEEEECBCCCCCTTCCCCCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCeEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHhccCCCeEEEEeehhhhhcCHHHHHHHHHhhHh
Confidence 34666779999987655433 2356666666665532 234567788765322 23 44578
Q ss_pred cCCCeEeecCCCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEEccH-HHHHHHHHHhcc
Q 018508 156 LGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESE-EGVKRAEDIAAV 234 (355)
Q Consensus 156 aGa~GImvP~Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mIET~-~av~nieeIaav 234 (355)
+|||+|++|-+.+.++++++.+.+.-| . +.-++|-. ...-+.+|+.+.
T Consensus 183 AGAD~if~~~~~~~ee~~~~~~~~~~P-l------------------------------~~n~~~~g~tp~~~~~eL~~l 231 (298)
T 3eoo_A 183 AGADMIFPEAMKTLDDYRRFKEAVKVP-I------------------------------LANLTEFGSTPLFTLDELKGA 231 (298)
T ss_dssp TTCSEEEECCCCSHHHHHHHHHHHCSC-B------------------------------EEECCTTSSSCCCCHHHHHHT
T ss_pred cCCCEEEeCCCCCHHHHHHHHHHcCCC-e------------------------------EEEeccCCCCCCCCHHHHHHc
Confidence 999999999999999999999998633 1 11111110 001236777776
Q ss_pred CCccEEEEChhhHHhhcCCCCCCCCHHHHHHHHHHHHHHHhCCC
Q 018508 235 DGVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVAEKGVLGGGK 278 (355)
Q Consensus 235 pgVD~l~iGp~DLs~slG~~~~~~~p~v~~ai~~iv~aa~a~g~ 278 (355)
|+..+++|..=+...+ .++.++.+..++.|.
T Consensus 232 -Gv~~v~~~~~~~raa~------------~a~~~~~~~i~~~g~ 262 (298)
T 3eoo_A 232 -NVDIALYCCGAYRAMN------------KAALNFYETVRRDGT 262 (298)
T ss_dssp -TCCEEEECSHHHHHHH------------HHHHHHHHHHHHHSS
T ss_pred -CCeEEEEchHHHHHHH------------HHHHHHHHHHHHcCC
Confidence 8999999988665443 344555555555553
No 97
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=92.96 E-value=0.8 Score=43.85 Aligned_cols=136 Identities=18% Similarity=0.245 Sum_probs=86.7
Q ss_pred HHHHhhhcCCcEEE----EeCCCCCCCHH---HHHHHHHHHHhCCCCeEE------c-----CCCCCHHHH----HHHHh
Q 018508 98 LAEISGLAGYDFVV----VDMEHGPGGIS---DALACLHALAATGTPAIL------R-----LPESCPTWA----KKALD 155 (355)
Q Consensus 98 ~~e~aa~~G~D~vi----lDlEh~~~~~~---~a~~~i~a~~~~g~~~iV------R-----V~~~~~~~i----~~aLd 155 (355)
.+|.+...|+|.|- +++.. +.+.+ ++.+.+..+...|.++++ | .++.++..+ +-+.+
T Consensus 133 sVe~AvrlGADaV~~l~~i~~Gs-~~e~~~l~~la~vv~ea~~~GlP~~~ep~~y~r~gg~v~~~~dp~~Va~aaRiAaE 211 (307)
T 3fok_A 133 NVSSMVDRGVDFAKTLVRINLSD-AGTAPTLEATAHAVNEAAAAQLPIMLEPFMSNWVNGKVVNDLSTDAVIQSVAIAAG 211 (307)
T ss_dssp CHHHHHHHTCCEEEEEEEECTTC-TTHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEEETTEEEECCSHHHHHHHHHHHHT
T ss_pred CHHHHHHCCCCEEEEEEEECCCC-hhHHHHHHHHHHHHHHHHHcCCcEEEEeeccccCCCCcCCCCCHHHHHHHHHHHHH
Confidence 56888889999944 55543 33333 334455667778887654 4 244567654 44667
Q ss_pred cCCC----eEeecCCCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEE-ccHHHHHHHHH
Q 018508 156 LGPQ----GVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQV-ESEEGVKRAED 230 (355)
Q Consensus 156 aGa~----GImvP~Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mI-ET~~av~niee 230 (355)
.|++ -|=+|.+ ++.+++++.|.- |.=..| | ... ...+.++.+++
T Consensus 212 LGADs~~tivK~~y~---e~f~~Vv~a~~v-PVViaG-----------G----------------~k~~~~~e~L~~v~~ 260 (307)
T 3fok_A 212 LGNDSSYTWMKLPVV---EEMERVMESTTM-PTLLLG-----------G----------------EGGNDPDATFASWEH 260 (307)
T ss_dssp CSSCCSSEEEEEECC---TTHHHHGGGCSS-CEEEEC-----------C----------------SCC--CHHHHHHHHH
T ss_pred hCCCcCCCEEEeCCc---HHHHHHHHhCCC-CEEEeC-----------C----------------CCCCCHHHHHHHHHH
Confidence 8999 8889998 567788888742 210000 0 012 24688889999
Q ss_pred HhccCCccEEEEChhhHHhhcCCCCCCCCHHHHHHHHHHHHHH
Q 018508 231 IAAVDGVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVAEKGV 273 (355)
Q Consensus 231 IaavpgVD~l~iGp~DLs~slG~~~~~~~p~v~~ai~~iv~aa 273 (355)
..+++|.-|+.+|.| -+|+.|+....+++.+..-.
T Consensus 261 A~~~aGa~Gv~vGRN--------IfQ~~~~dp~~~v~al~~iV 295 (307)
T 3fok_A 261 ALTLPGVRGLTVGRT--------LLYPQDGDVAAAVDTAARLV 295 (307)
T ss_dssp HTTSTTEEEEEECTT--------TSSCSSSCHHHHHHHHHHHH
T ss_pred HHHhCCCeEEeechh--------hccCCCCCHHHHHHHHHHHH
Confidence 888889999999998 24654565556665554444
No 98
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=92.82 E-value=2 Score=34.49 Aligned_cols=104 Identities=15% Similarity=0.093 Sum_probs=64.1
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKA 153 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~a 153 (355)
..+++.|..-....-+..-.+..+..+.+....+|.|++|+.-...+--++...++.. ....++++=....+...+..+
T Consensus 29 ~~l~~~L~~~~~~~~v~~~~~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~-~~~~~ii~~s~~~~~~~~~~~ 107 (152)
T 3eul_A 29 EGVVRALSLSGSVNVVGEADDGAAALELIKAHLPDVALLDYRMPGMDGAQVAAAVRSY-ELPTRVLLISAHDEPAIVYQA 107 (152)
T ss_dssp HHHHHHHHHHSSEEEEEEESSHHHHHHHHHHHCCSEEEEETTCSSSCHHHHHHHHHHT-TCSCEEEEEESCCCHHHHHHH
T ss_pred HHHHHHHhhCCCeEEEEEeCCHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhc-CCCCeEEEEEccCCHHHHHHH
Confidence 3566666543322112222334456677777889999999987655544444444332 223445554555667778899
Q ss_pred HhcCCCeEeecCCCCHHHHHHHHHHc
Q 018508 154 LDLGPQGVMFPMIDSPEAAKEAVSYC 179 (355)
Q Consensus 154 LdaGa~GImvP~Vesaeea~~vv~a~ 179 (355)
+++|+++++. +=-+.+++...++.+
T Consensus 108 ~~~g~~~~l~-Kp~~~~~l~~~i~~~ 132 (152)
T 3eul_A 108 LQQGAAGFLL-KDSTRTEIVKAVLDC 132 (152)
T ss_dssp HHTTCSEEEE-TTCCHHHHHHHHHHH
T ss_pred HHcCCCEEEe-cCCCHHHHHHHHHHH
Confidence 9999998654 445778887777655
No 99
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=92.81 E-value=6.2 Score=37.38 Aligned_cols=183 Identities=13% Similarity=0.044 Sum_probs=104.0
Q ss_pred hHHHHHHHcCCcEEEEEE-ecCCHHHHHHhhhcCC-cEEEEeCCCCCCCHHHHHHHHHHHHh-CCCCeEEcCC--CCC-H
Q 018508 74 ESLKYRLQSNETLYGLFL-LSFSPTLAEISGLAGY-DFVVVDMEHGPGGISDALACLHALAA-TGTPAILRLP--ESC-P 147 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v-~~~sp~~~e~aa~~G~-D~vilDlEh~~~~~~~a~~~i~a~~~-~g~~~iVRV~--~~~-~ 147 (355)
++|.+.|.-.-|.+.-=+ ...+++.+..+...|. .++.. + ..+.+++++.++.++. ...+..|-+- ..+ .
T Consensus 3 t~~~~~l~~~~Pii~apM~g~s~~~la~av~~aG~lG~i~~--~--~~~~~~~~~~i~~i~~~~~~p~gvnl~~~~~~~~ 78 (332)
T 2z6i_A 3 TRITELLKIDYPIFQGGMAWVADGDLAGAVSKAGGLGIIGG--G--NAPKEVVKANIDKIKSLTDKPFGVNIMLLSPFVE 78 (332)
T ss_dssp CHHHHHHTCSSSEEECCCTTTCCHHHHHHHHHHTSBEEEEC--T--TCCHHHHHHHHHHHHHHCCSCEEEEECTTSTTHH
T ss_pred ChhhHHhCCCCCEEeCCCCCCCcHHHHHHHHhCCCcEEeCC--C--CCCHHHHHHHHHHHHHhcCCCEEEEecCCCCCHH
Confidence 456666654445442211 3467888888888886 55532 2 2456677776666543 3334334332 223 3
Q ss_pred HHHHHHHhcCCCeEeecCCCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEEccHHHHHH
Q 018508 148 TWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKR 227 (355)
Q Consensus 148 ~~i~~aLdaGa~GImvP~Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mIET~~av~n 227 (355)
..+..+++.|+++|.+..-...+ +++.++. ..+.+++.|.|++-+..
T Consensus 79 ~~~~~a~~~g~d~V~~~~g~p~~----~i~~l~~-----------------------------~g~~v~~~v~~~~~a~~ 125 (332)
T 2z6i_A 79 DIVDLVIEEGVKVVTTGAGNPSK----YMERFHE-----------------------------AGIIVIPVVPSVALAKR 125 (332)
T ss_dssp HHHHHHHHTTCSEEEECSSCGGG----THHHHHH-----------------------------TTCEEEEEESSHHHHHH
T ss_pred HHHHHHHHCCCCEEEECCCChHH----HHHHHHH-----------------------------cCCeEEEEeCCHHHHHH
Confidence 45788899999999998743222 2222221 02457788888876554
Q ss_pred HHHHhccCCccEEEE-ChhhHHhhcCCCCCCCCHHHHHHHHHHHHHHHhCCCce--eecccCCchhHHHHHHCCCCEEEe
Q 018508 228 AEDIAAVDGVDCVQM-GPLDLSASMGYLWDPGHRKVREMMRVAEKGVLGGGKAY--LAGFAMPHDAPLEMKSRGYHMVSG 304 (355)
Q Consensus 228 ieeIaavpgVD~l~i-Gp~DLs~slG~~~~~~~p~v~~ai~~iv~aa~a~g~~~--~g~~~~d~~~a~~~~~~G~~~vs~ 304 (355)
+++ .|+|+|.+ |.. .-|..++. + ....+.++.+. ..+++ .|++ .+++.+..++++|.+++.+
T Consensus 126 ~~~----~GaD~i~v~g~~----~GG~~g~~--~-~~~ll~~i~~~---~~iPViaaGGI-~~~~~~~~al~~GAdgV~v 190 (332)
T 2z6i_A 126 MEK----IGADAVIAEGME----AGGHIGKL--T-TMTLVRQVATA---ISIPVIAAGGI-ADGEGAAAGFMLGAEAVQV 190 (332)
T ss_dssp HHH----TTCSCEEEECTT----SSEECCSS--C-HHHHHHHHHHH---CSSCEEEESSC-CSHHHHHHHHHTTCSEEEE
T ss_pred HHH----cCCCEEEEECCC----CCCCCCCc--c-HHHHHHHHHHh---cCCCEEEECCC-CCHHHHHHHHHcCCCEEEe
Confidence 443 37899888 541 11222221 1 22344444332 24443 3333 3578888888999999999
Q ss_pred cchH
Q 018508 305 AVDV 308 (355)
Q Consensus 305 ~~D~ 308 (355)
|+-.
T Consensus 191 Gs~~ 194 (332)
T 2z6i_A 191 GTRF 194 (332)
T ss_dssp CHHH
T ss_pred cHHH
Confidence 8654
No 100
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=92.76 E-value=1.4 Score=44.40 Aligned_cols=78 Identities=19% Similarity=0.121 Sum_probs=53.0
Q ss_pred CCcEEEEEEecC--CHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHh-C-CCCeEEcCCCCCHHHHHHHHhcCC
Q 018508 83 NETLYGLFLLSF--SPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAA-T-GTPAILRLPESCPTWAKKALDLGP 158 (355)
Q Consensus 83 G~~~~gl~v~~~--sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~-~-g~~~iVRV~~~~~~~i~~aLdaGa 158 (355)
|+..++.-+... ..+.++.+...|+|+|.||.-|+-. ....+.++.++. . +.++++- +-.....++++.++|+
T Consensus 216 grl~v~aavG~~~~~~~~a~~l~~aG~d~I~id~a~g~~--~~~~~~v~~i~~~~p~~~Vi~g-~v~t~e~a~~l~~aGa 292 (490)
T 4avf_A 216 GRLRVGAAVGTGADTGERVAALVAAGVDVVVVDTAHGHS--KGVIERVRWVKQTFPDVQVIGG-NIATAEAAKALAEAGA 292 (490)
T ss_dssp SCBCCEEEECSSTTHHHHHHHHHHTTCSEEEEECSCCSB--HHHHHHHHHHHHHCTTSEEEEE-EECSHHHHHHHHHTTC
T ss_pred CcceeeeeeccccchHHHHHHHhhcccceEEecccCCcc--hhHHHHHHHHHHHCCCceEEEe-eeCcHHHHHHHHHcCC
Confidence 444555555443 3567888889999999999998732 344455555532 3 4455552 3345778899999999
Q ss_pred CeEee
Q 018508 159 QGVMF 163 (355)
Q Consensus 159 ~GImv 163 (355)
++|.+
T Consensus 293 D~I~v 297 (490)
T 4avf_A 293 DAVKV 297 (490)
T ss_dssp SEEEE
T ss_pred CEEEE
Confidence 99998
No 101
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=92.61 E-value=0.91 Score=43.40 Aligned_cols=137 Identities=13% Similarity=0.028 Sum_probs=85.3
Q ss_pred HHHHhhhcCCcEEEEeCCCC-----------CCCHHHHHHHHHHHHhCC--CCeEEcCCCCC----HHHH---HHHHhcC
Q 018508 98 LAEISGLAGYDFVVVDMEHG-----------PGGISDALACLHALAATG--TPAILRLPESC----PTWA---KKALDLG 157 (355)
Q Consensus 98 ~~e~aa~~G~D~vilDlEh~-----------~~~~~~a~~~i~a~~~~g--~~~iVRV~~~~----~~~i---~~aLdaG 157 (355)
.++.+..+|++.|-|.=.-. ..+.+++...|+++...+ ..++-|..... ...| +...++|
T Consensus 109 ~v~~l~~aGaagv~iED~~~~krcGh~~gk~l~~~~e~~~rI~Aa~~A~~~~~I~ARtda~~~~g~~~ai~Ra~ay~eAG 188 (305)
T 3ih1_A 109 TAVEMVEAKVAAVQIEDQQLPKKCGHLNGKKLVTTEELVQKIKAIKEVAPSLYIVARTDARGVEGLDEAIERANAYVKAG 188 (305)
T ss_dssp HHHHHHHTTCSEEEEECBCSSCCTTCTTCCCBCCHHHHHHHHHHHHHHCTTSEEEEEECCHHHHCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhCCcEEEECCCCCCcccCCCCCCcccCHHHHHHHHHHHHHcCCCeEEEEeeccccccCHHHHHHHHHHHHHcC
Confidence 34666779999988654422 234566666676654333 34566876531 1223 4457899
Q ss_pred CCeEeecCCCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEEcc-HHHHHHHHHHhccCC
Q 018508 158 PQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVES-EEGVKRAEDIAAVDG 236 (355)
Q Consensus 158 a~GImvP~Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mIET-~~av~nieeIaavpg 236 (355)
|++|++|.+.+.++++++.+.+.-| . +.-|+|- ....-+.+|+.+. |
T Consensus 189 AD~i~~e~~~~~~~~~~i~~~~~~P-~------------------------------~~n~~~~g~tp~~~~~eL~~l-G 236 (305)
T 3ih1_A 189 ADAIFPEALQSEEEFRLFNSKVNAP-L------------------------------LANMTEFGKTPYYSAEEFANM-G 236 (305)
T ss_dssp CSEEEETTCCSHHHHHHHHHHSCSC-B------------------------------EEECCTTSSSCCCCHHHHHHT-T
T ss_pred CCEEEEcCCCCHHHHHHHHHHcCCC-E------------------------------EEeecCCCCCCCCCHHHHHHc-C
Confidence 9999999999999999999988643 1 1112221 0001236777766 8
Q ss_pred ccEEEEChhhHHhhcCCCCCCCCHHHHHHHHHHHHHHHhCCC
Q 018508 237 VDCVQMGPLDLSASMGYLWDPGHRKVREMMRVAEKGVLGGGK 278 (355)
Q Consensus 237 VD~l~iGp~DLs~slG~~~~~~~p~v~~ai~~iv~aa~a~g~ 278 (355)
+..+++|..=+...+ .++.++.+..++.|.
T Consensus 237 v~~v~~~~~~~raa~------------~a~~~~~~~i~~~g~ 266 (305)
T 3ih1_A 237 FQMVIYPVTSLRVAA------------KAYENVFTLIKETGS 266 (305)
T ss_dssp CSEEEECSHHHHHHH------------HHHHHHHHHHHHHSS
T ss_pred CCEEEEchHHHHHHH------------HHHHHHHHHHHhcCC
Confidence 999999987665443 344555555555553
No 102
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=92.49 E-value=2.4 Score=33.23 Aligned_cols=105 Identities=12% Similarity=0.002 Sum_probs=62.3
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKA 153 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~a 153 (355)
..+++.|.......-+....+..+..+.+....+|.|++|+.-...+--++...++.. ....++++=....+...+.++
T Consensus 17 ~~l~~~l~~~~~~~~v~~~~~~~~al~~~~~~~~dlvilD~~lp~~~g~~~~~~l~~~-~~~~~ii~ls~~~~~~~~~~~ 95 (133)
T 3b2n_A 17 QAMVQLIKLHGDFEILADTDNGLDAMKLIEEYNPNVVILDIEMPGMTGLEVLAEIRKK-HLNIKVIIVTTFKRPGYFEKA 95 (133)
T ss_dssp HHHHHHHHHHSSEEEEEEESCHHHHHHHHHHHCCSEEEECSSCSSSCHHHHHHHHHHT-TCSCEEEEEESCCCHHHHHHH
T ss_pred HHHHHHHhhCCCcEEEEEcCCHHHHHHHHhhcCCCEEEEecCCCCCCHHHHHHHHHHH-CCCCcEEEEecCCCHHHHHHH
Confidence 3456666542211112222233455666667789999999986544433333334331 223444544455567778899
Q ss_pred HhcCCCeEeecCCCCHHHHHHHHHHcC
Q 018508 154 LDLGPQGVMFPMIDSPEAAKEAVSYCR 180 (355)
Q Consensus 154 LdaGa~GImvP~Vesaeea~~vv~a~~ 180 (355)
+..|+++.+ +|=-+.+++...++.+.
T Consensus 96 ~~~ga~~~l-~Kp~~~~~L~~~i~~~~ 121 (133)
T 3b2n_A 96 VVNDVDAYV-LKERSIEELVETINKVN 121 (133)
T ss_dssp HHTTCSEEE-ETTSCHHHHHHHHHHHH
T ss_pred HHcCCcEEE-ECCCCHHHHHHHHHHHH
Confidence 999999875 45557888887776653
No 103
>3s9z_A Malate synthase G; inhibitor complex, structural genomics, mycobacterium tuberc structural proteomics project, XMTB; HET: I92; 1.79A {Mycobacterium tuberculosis} PDB: 3s9i_A* 3sad_A* 3saz_A* 3sb0_A* 1n8i_A 1n8w_A* 2gq3_A* 4ex4_A
Probab=92.37 E-value=0.18 Score=53.04 Aligned_cols=71 Identities=15% Similarity=0.109 Sum_probs=56.5
Q ss_pred eEeecCCCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEEccHHHHHHHHHHhc--cCCc
Q 018508 160 GVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKRAEDIAA--VDGV 237 (355)
Q Consensus 160 GImvP~Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mIET~~av~nieeIaa--vpgV 237 (355)
-|+.||.++++|++-..+...+. .+++.-....+.+.+||||..+.-|++||.. -++|
T Consensus 394 YivkPKmhgp~Evaf~~~lF~~v--------------------E~~LgLp~~TiK~gVmdEerrts~nl~eci~alr~rv 453 (741)
T 3s9z_A 394 YIVKPKMHGPAEVAFTCELFSRV--------------------EDVLGLPQNTMKIGIMDEERRTTVNLKACIKAAADRV 453 (741)
T ss_dssp EEEECCCCSHHHHHHHHHHHHHH--------------------HHHHTCCTTCEEEEEEECSHHHHTTHHHHHHHTTTTE
T ss_pred eEEecCCCChHHHHHHHHHHHHH--------------------HHHhCCCCCcEEEEEEeccchhhhhHHHHHHHHHhhe
Confidence 59999999999998666554321 1222233567999999999999999999983 4789
Q ss_pred cEEEEChhhHHhh
Q 018508 238 DCVQMGPLDLSAS 250 (355)
Q Consensus 238 D~l~iGp~DLs~s 250 (355)
-+|-.|.-|++.|
T Consensus 454 vfINtGfwDrtgs 466 (741)
T 3s9z_A 454 VFINTGFLDRTGD 466 (741)
T ss_dssp EEEEECHHHHHHH
T ss_pred eecccChhhhhhh
Confidence 9999999999886
No 104
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=92.36 E-value=2.9 Score=32.67 Aligned_cols=103 Identities=18% Similarity=0.088 Sum_probs=65.2
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKA 153 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~a 153 (355)
..+++.|+.+...+.. -.+..+..+.+....+|.|++|++-...+--++...++.. ....++++=....+.....++
T Consensus 21 ~~l~~~L~~~~~~v~~--~~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~-~~~~~ii~~s~~~~~~~~~~~ 97 (137)
T 3hdg_A 21 EWLSTIISNHFPEVWS--AGDGEEGERLFGLHAPDVIITDIRMPKLGGLEMLDRIKAG-GAKPYVIVISAFSEMKYFIKA 97 (137)
T ss_dssp HHHHHHHHTTCSCEEE--ESSHHHHHHHHHHHCCSEEEECSSCSSSCHHHHHHHHHHT-TCCCEEEECCCCCCHHHHHHH
T ss_pred HHHHHHHHhcCcEEEE--ECCHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHhc-CCCCcEEEEecCcChHHHHHH
Confidence 4577778765443332 2233445667777889999999986654443443334331 123444554555567778899
Q ss_pred HhcCCCeEeecCCCCHHHHHHHHHHcC
Q 018508 154 LDLGPQGVMFPMIDSPEAAKEAVSYCR 180 (355)
Q Consensus 154 LdaGa~GImvP~Vesaeea~~vv~a~~ 180 (355)
+..|+++++ ++=-+.+++...++.+.
T Consensus 98 ~~~g~~~~l-~kP~~~~~l~~~i~~~~ 123 (137)
T 3hdg_A 98 IELGVHLFL-PKPIEPGRLMETLEDFR 123 (137)
T ss_dssp HHHCCSEEC-CSSCCHHHHHHHHHHHH
T ss_pred HhCCcceeE-cCCCCHHHHHHHHHHHH
Confidence 999999864 45567888887777664
No 105
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=92.35 E-value=2.4 Score=39.73 Aligned_cols=70 Identities=13% Similarity=0.007 Sum_probs=41.8
Q ss_pred ecCCHHHHHHhhhcCCcEE-EEe----CCCC-C-----CCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHHHhcCCCe
Q 018508 92 LSFSPTLAEISGLAGYDFV-VVD----MEHG-P-----GGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQG 160 (355)
Q Consensus 92 ~~~sp~~~e~aa~~G~D~v-ilD----lEh~-~-----~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~aLdaGa~G 160 (355)
.....+.++.+...|+|+| ++| .+.. . .+.+.++.+. +..+.++++.+.......++.++++|+++
T Consensus 27 ~~~~~~~a~~~~~~Ga~~I~~l~p~~~~~~~~~G~~~~~~~~~i~~I~---~~~~iPv~~k~r~g~~~~~~~~~a~GAd~ 103 (305)
T 2nv1_A 27 DVINAEQAKIAEEAGAVAVMALERVPADIRAAGGVARMADPTIVEEVM---NAVSIPVMAKARIGHIVEARVLEAMGVDY 103 (305)
T ss_dssp EESSHHHHHHHHHTTCSEEEECCC-------CCCCCCCCCHHHHHHHH---HHCSSCEEEEECTTCHHHHHHHHHHTCSE
T ss_pred cCCHHHHHHHHHHcCCCEEEEcCCCcchhhhccCcccCCCHHHHHHHH---HhCCCCEEecccccchHHHHHHHHCCCCE
Confidence 4566788899999999999 775 2211 1 1333333332 23455655433322245677788899999
Q ss_pred Eeec
Q 018508 161 VMFP 164 (355)
Q Consensus 161 ImvP 164 (355)
|...
T Consensus 104 V~~~ 107 (305)
T 2nv1_A 104 IDES 107 (305)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 9743
No 106
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=92.31 E-value=1.5 Score=34.04 Aligned_cols=104 Identities=18% Similarity=0.136 Sum_probs=59.9
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKA 153 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~a 153 (355)
..+++.|..-...+ ..-.+..+..+.+....+|.|++|++-...+--+....++. .....++++=....+......+
T Consensus 21 ~~l~~~L~~~g~~v--~~~~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~-~~~~~~ii~~t~~~~~~~~~~~ 97 (130)
T 3eod_A 21 SLLDSWFSSLGATT--VLAADGVDALELLGGFTPDLMICDIAMPRMNGLKLLEHIRN-RGDQTPVLVISATENMADIAKA 97 (130)
T ss_dssp HHHHHHHHHTTCEE--EEESCHHHHHHHHTTCCCSEEEECCC-----CHHHHHHHHH-TTCCCCEEEEECCCCHHHHHHH
T ss_pred HHHHHHHHhCCceE--EEeCCHHHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHh-cCCCCCEEEEEcCCCHHHHHHH
Confidence 45666666533222 22233344566777778999999997543221222222322 1224455555566677778899
Q ss_pred HhcCCCeEeecCCCCHHHHHHHHHHcC
Q 018508 154 LDLGPQGVMFPMIDSPEAAKEAVSYCR 180 (355)
Q Consensus 154 LdaGa~GImvP~Vesaeea~~vv~a~~ 180 (355)
++.|+++++.--+.+.+++..+++.+-
T Consensus 98 ~~~g~~~~l~KP~~~~~~l~~~i~~~l 124 (130)
T 3eod_A 98 LRLGVEDVLLKPVKDLNRLREMVFACL 124 (130)
T ss_dssp HHHCCSEEEESCC---CHHHHHHHHHH
T ss_pred HHcCCCEEEeCCCCcHHHHHHHHHHHh
Confidence 999999977655557888888887764
No 107
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=92.19 E-value=1.1 Score=42.67 Aligned_cols=122 Identities=16% Similarity=0.099 Sum_probs=76.4
Q ss_pred HHHHhhhcCCcEEEEeCCCCC-----------CCHHHHHHHHHHHHh------CCCCeEEcCCCCCH----HHH---HHH
Q 018508 98 LAEISGLAGYDFVVVDMEHGP-----------GGISDALACLHALAA------TGTPAILRLPESCP----TWA---KKA 153 (355)
Q Consensus 98 ~~e~aa~~G~D~vilDlEh~~-----------~~~~~a~~~i~a~~~------~g~~~iVRV~~~~~----~~i---~~a 153 (355)
.++.+..+|+..|-|.=+..+ .+.+++..-|+++.. ....++.|+..... +.| +..
T Consensus 100 tv~~l~~aGaagv~iEDq~~~Krcgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTDa~~~~gldeAi~Ra~ay 179 (302)
T 3fa4_A 100 TTEQYSRSGVAAFHIEDQVQTKRCGHLAGKILVDTDTYVTRIRAAVQARQRIGSDIVVIARTDSLQTHGYEESVARLRAA 179 (302)
T ss_dssp HHHHHHHTTCCEEEECSBCCC-------CCCBCCHHHHHHHHHHHHHHHHHHTCCCEEEEEECCHHHHCHHHHHHHHHHH
T ss_pred HHHHHHHcCCcEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCEEEEEEecccccCCHHHHHHHHHHH
Confidence 456677899998886544322 345666665655421 23456779876421 123 456
Q ss_pred HhcCCCeEeecCCCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEEccHH-HHHHHHHHh
Q 018508 154 LDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEE-GVKRAEDIA 232 (355)
Q Consensus 154 LdaGa~GImvP~Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mIET~~-av~nieeIa 232 (355)
.++|||+|++|-+.+.++++++++.+.--| +++-|+|... .....+|+.
T Consensus 180 ~eAGAD~ifi~g~~~~~ei~~~~~~~~~~P------------------------------l~~n~~~~g~~p~~~~~eL~ 229 (302)
T 3fa4_A 180 RDAGADVGFLEGITSREMARQVIQDLAGWP------------------------------LLLNMVEHGATPSISAAEAK 229 (302)
T ss_dssp HTTTCSEEEETTCCCHHHHHHHHHHTTTSC------------------------------EEEECCTTSSSCCCCHHHHH
T ss_pred HHcCCCEEeecCCCCHHHHHHHHHHhcCCc------------------------------eeEEEecCCCCCCCCHHHHH
Confidence 789999999999999999999999874111 2233344311 122456666
Q ss_pred ccCCccEEEEChhhHHhh
Q 018508 233 AVDGVDCVQMGPLDLSAS 250 (355)
Q Consensus 233 avpgVD~l~iGp~DLs~s 250 (355)
+. ||..+++|..=|..+
T Consensus 230 ~l-Gv~~v~~~~~~~raa 246 (302)
T 3fa4_A 230 EM-GFRIIIFPFAALGPA 246 (302)
T ss_dssp HH-TCSEEEETTTTHHHH
T ss_pred Hc-CCCEEEEchHHHHHH
Confidence 55 788888877655444
No 108
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=92.08 E-value=2.7 Score=38.02 Aligned_cols=71 Identities=8% Similarity=-0.012 Sum_probs=42.0
Q ss_pred HHHHHHhhhcCCcEEEE-eCCCCCCCHHHHHHHHHHHH-hCCCCeEEcCCCCCHHHHHHHHhcCCCeEeecCC
Q 018508 96 PTLAEISGLAGYDFVVV-DMEHGPGGISDALACLHALA-ATGTPAILRLPESCPTWAKKALDLGPQGVMFPMI 166 (355)
Q Consensus 96 p~~~e~aa~~G~D~vil-DlEh~~~~~~~a~~~i~a~~-~~g~~~iVRV~~~~~~~i~~aLdaGa~GImvP~V 166 (355)
.+.++.+...|+|+|.+ |+...........+.++.+. ..+.++++--.-.+...+..+++.|+++|+++..
T Consensus 33 ~~~a~~~~~~Ga~~i~v~d~~~~~~~~g~~~~~i~~i~~~~~iPvi~~ggi~~~~~i~~~~~~Gad~v~lg~~ 105 (266)
T 2w6r_A 33 RDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAGADKALAASV 105 (266)
T ss_dssp HHHHHHHHHHTCSEEEEEETTTSSCSSCCCHHHHHHHGGGCCSCEEEESCCCSTHHHHHHHHHTCSEEECCCC
T ss_pred HHHHHHHHHCCCCEEEEEecCcccCCCcccHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCcHhhhhHH
Confidence 45778888999998775 54422111000122333332 3455655522212456788999999999999874
No 109
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=92.08 E-value=1 Score=39.73 Aligned_cols=68 Identities=9% Similarity=-0.039 Sum_probs=46.0
Q ss_pred CCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhC--CCCeEEcCCCCCHHHHHHHHhcCCCeEee
Q 018508 94 FSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAAT--GTPAILRLPESCPTWAKKALDLGPQGVMF 163 (355)
Q Consensus 94 ~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~--g~~~iVRV~~~~~~~i~~aLdaGa~GImv 163 (355)
++.+.++.+...|+|+|.+..+......+...+.++.++.. +..+++.+. ++..+.++.+.|++.|++
T Consensus 76 ~~~~~i~~~~~~Gad~v~l~~~~~~~p~~~~~~~i~~~~~~~~~~~v~~~~~--t~~e~~~~~~~G~d~i~~ 145 (223)
T 1y0e_A 76 ATSKEVDELIESQCEVIALDATLQQRPKETLDELVSYIRTHAPNVEIMADIA--TVEEAKNAARLGFDYIGT 145 (223)
T ss_dssp CSHHHHHHHHHHTCSEEEEECSCSCCSSSCHHHHHHHHHHHCTTSEEEEECS--SHHHHHHHHHTTCSEEEC
T ss_pred CcHHHHHHHHhCCCCEEEEeeecccCcccCHHHHHHHHHHhCCCceEEecCC--CHHHHHHHHHcCCCEEEe
Confidence 34567888899999999999987421002234445444433 666776554 466788889999999876
No 110
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=92.06 E-value=1.3 Score=41.65 Aligned_cols=118 Identities=17% Similarity=0.146 Sum_probs=76.9
Q ss_pred HHHHhhhcCCcEEEEeCCC--C---CCCHHHHHHHHHHHHhC----CC--CeEEcCCCCC-----------HHHH---HH
Q 018508 98 LAEISGLAGYDFVVVDMEH--G---PGGISDALACLHALAAT----GT--PAILRLPESC-----------PTWA---KK 152 (355)
Q Consensus 98 ~~e~aa~~G~D~vilDlEh--~---~~~~~~a~~~i~a~~~~----g~--~~iVRV~~~~-----------~~~i---~~ 152 (355)
.+..+..+|+..|-|.=.- . ..+.++....|+++... |. .+.-|..... ...| +.
T Consensus 97 ~v~~l~~aGaagv~iED~~~~~~k~l~~~~e~~~~I~aa~~a~~~~g~~~~i~aRtda~~~~~g~~~~~~~~~ai~Ra~a 176 (275)
T 2ze3_A 97 TVEHFAALGVAGVNLEDATGLTPTELYDLDSQLRRIEAARAAIDASGVPVFLNARTDTFLKGHGATDEERLAETVRRGQA 176 (275)
T ss_dssp HHHHHHHTTCSEEEEECBCSSSSSCBCCHHHHHHHHHHHHHHHHHHTSCCEEEEECCTTTTTCSSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCcEEEECCCcCCCCCccCCHHHHHHHHHHHHHhHhhcCCCeEEEEechhhhccccccchhhHHHHHHHHHH
Confidence 4556667999998774332 1 24566776666655322 44 3566876631 1123 44
Q ss_pred HHhcCCCeEeecCCCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEEccHHHHHHHHHHh
Q 018508 153 ALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKRAEDIA 232 (355)
Q Consensus 153 aLdaGa~GImvP~Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mIET~~av~nieeIa 232 (355)
..++||++|++|.+.+.++++++.+.+..| + .+++++ .....+|+.
T Consensus 177 y~eAGAd~i~~e~~~~~~~~~~i~~~~~~P------------------------------~---n~~~~~-~~~~~~eL~ 222 (275)
T 2ze3_A 177 YADAGADGIFVPLALQSQDIRALADALRVP------------------------------L---NVMAFP-GSPVPRALL 222 (275)
T ss_dssp HHHTTCSEEECTTCCCHHHHHHHHHHCSSC------------------------------E---EEECCT-TSCCHHHHH
T ss_pred HHHCCCCEEEECCCCCHHHHHHHHHhcCCC------------------------------E---EEecCC-CCCCHHHHH
Confidence 567899999999999999999999998743 1 112222 244567877
Q ss_pred ccCCccEEEEChhhHHhh
Q 018508 233 AVDGVDCVQMGPLDLSAS 250 (355)
Q Consensus 233 avpgVD~l~iGp~DLs~s 250 (355)
+. |+..+++|..=+...
T Consensus 223 ~l-Gv~~v~~~~~~~raa 239 (275)
T 2ze3_A 223 DA-GAARVSFGQSLMLAT 239 (275)
T ss_dssp HT-TCSEEECTTHHHHHH
T ss_pred Hc-CCcEEEEChHHHHHH
Confidence 76 899999988755443
No 111
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=91.68 E-value=3.9 Score=31.89 Aligned_cols=101 Identities=14% Similarity=0.104 Sum_probs=63.5
Q ss_pred hHHHHHHHcCCcEEEEE-EecCCHHHHHHhhhcCCcEEEEeCCCC-CCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHH
Q 018508 74 ESLKYRLQSNETLYGLF-LLSFSPTLAEISGLAGYDFVVVDMEHG-PGGISDALACLHALAATGTPAILRLPESCPTWAK 151 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~-v~~~sp~~~e~aa~~G~D~vilDlEh~-~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~ 151 (355)
..+++.|..-.. -+. ...+..+..+.+....+|.|++|++-. ..+-.+....++.. ...++++=....+...+.
T Consensus 23 ~~l~~~L~~~g~--~v~~~~~~~~~a~~~~~~~~~dlii~d~~~~~~~~g~~~~~~l~~~--~~~~ii~ls~~~~~~~~~ 98 (140)
T 3cg0_A 23 ATLRIQLESLGY--DVLGVFDNGEEAVRCAPDLRPDIALVDIMLCGALDGVETAARLAAG--CNLPIIFITSSQDVETFQ 98 (140)
T ss_dssp HHHHHHHHHHTC--EEEEEESSHHHHHHHHHHHCCSEEEEESSCCSSSCHHHHHHHHHHH--SCCCEEEEECCCCHHHHH
T ss_pred HHHHHHHHHCCC--eeEEEECCHHHHHHHHHhCCCCEEEEecCCCCCCCHHHHHHHHHhC--CCCCEEEEecCCCHHHHH
Confidence 456666664222 222 122334456667777899999999875 34444444444443 456666666666777888
Q ss_pred HHHhcCCCeEeecCCCCHHHHHHHHHHc
Q 018508 152 KALDLGPQGVMFPMIDSPEAAKEAVSYC 179 (355)
Q Consensus 152 ~aLdaGa~GImvP~Vesaeea~~vv~a~ 179 (355)
++++.|+++++ ++--+.+++...++.+
T Consensus 99 ~~~~~g~~~~l-~kp~~~~~l~~~i~~~ 125 (140)
T 3cg0_A 99 RAKRVNPFGYL-AKPVAADTLHRSIEMA 125 (140)
T ss_dssp HHHTTCCSEEE-EESCCHHHHHHHHHHH
T ss_pred HHHhcCCCEEE-eCCCCHHHHHHHHHHH
Confidence 99999999875 4445678877666554
No 112
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=91.68 E-value=9 Score=36.11 Aligned_cols=205 Identities=12% Similarity=0.097 Sum_probs=121.8
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEe----------CCCC-CCCHHHHHHHHHHHH-hCCCCeEEc
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVD----------MEHG-PGGISDALACLHALA-ATGTPAILR 141 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilD----------lEh~-~~~~~~a~~~i~a~~-~~g~~~iVR 141 (355)
..||+++++|++++ ..+.-+...+.++..+|||.|++- ..|. +.+.++....++.+. ....+++|=
T Consensus 11 ~~lr~l~~~~~~i~--~~~a~D~~sA~i~e~aGf~ai~vs~s~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~~PviaD 88 (287)
T 3b8i_A 11 AMFRALLDSSRCYH--TASVFDPMSARIAADLGFECGILGGSVASLQVLAAPDFALITLSEFVEQATRIGRVARLPVIAD 88 (287)
T ss_dssp HHHHHHHHSSCCEE--CEECCSHHHHHHHHHTTCSCEEECHHHHHHHHHSCCSSSCSCHHHHHHHHHHHHTTCSSCEEEE
T ss_pred HHHHHHHhCCCcEE--EecCCCHHHHHHHHHcCCCEEEeCcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEE
Confidence 57999999988854 345678888889989999998863 2221 356777776666653 456677776
Q ss_pred CCCC--CHH----HHHHHHhcCCCeEee-----cC--------CCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCC
Q 018508 142 LPES--CPT----WAKKALDLGPQGVMF-----PM--------IDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGID 202 (355)
Q Consensus 142 V~~~--~~~----~i~~aLdaGa~GImv-----P~--------Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~ 202 (355)
.+.. ++. .++++.++|+.||.+ || +-+.++...-+++++.. +.
T Consensus 89 ~d~Gyg~~~~~~~~v~~l~~aGa~gv~iED~~~pKrcgh~~gkl~~~~e~~~~I~aa~~a--~~---------------- 150 (287)
T 3b8i_A 89 ADHGYGNALNVMRTVVELERAGIAALTIEDTLLPAQFGRKSTDLICVEEGVGKIRAALEA--RV---------------- 150 (287)
T ss_dssp CTTCSSSHHHHHHHHHHHHHHTCSEEEEECBCCSCCTTTCTTCBCCHHHHHHHHHHHHHH--CC----------------
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCeEEEEcCCCCccccCCCCCCccCHHHHHHHHHHHHHc--CC----------------
Confidence 6643 343 357788899988765 32 22334433333333211 00
Q ss_pred ccccccCCCceEEEEEEcc-----HHHHHHHHHHhccCCccEEEEChhhHHhhcCCCCCCCCHHHHHHHHHHHHHHHhCC
Q 018508 203 EGYLSNYEEELLIMCQVES-----EEGVKRAEDIAAVDGVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVAEKGVLGGG 277 (355)
Q Consensus 203 ~~y~~~~n~~i~vi~mIET-----~~av~nieeIaavpgVD~l~iGp~DLs~slG~~~~~~~p~v~~ai~~iv~aa~a~g 277 (355)
.....|++-.|. .++++.+....+ -|.|+||+= +. ..++. +.++. ++-.
T Consensus 151 -------~~~~~i~aRtdaa~~gl~~ai~Ra~ay~e-AGAd~i~~e--------~~----~~~~~---~~~i~---~~~~ 204 (287)
T 3b8i_A 151 -------DPALTIIARTNAELIDVDAVIQRTLAYQE-AGADGICLV--------GV----RDFAH---LEAIA---EHLH 204 (287)
T ss_dssp -------STTSEEEEEEETTTSCHHHHHHHHHHHHH-TTCSEEEEE--------CC----CSHHH---HHHHH---TTCC
T ss_pred -------CCCcEEEEechhhhcCHHHHHHHHHHHHH-cCCCEEEec--------CC----CCHHH---HHHHH---HhCC
Confidence 123456666665 246666666664 389999882 11 11222 22222 2223
Q ss_pred Cceeecc--cCCc-hhHHHHHHCCCCEEEecchHHHHHHHHHHHHHHHHHhcC
Q 018508 278 KAYLAGF--AMPH-DAPLEMKSRGYHMVSGAVDVGLFRSAAVEDVARFKMNLT 327 (355)
Q Consensus 278 ~~~~g~~--~~d~-~~a~~~~~~G~~~vs~~~D~~ll~~~~~~~~~~~r~~~~ 327 (355)
++.. .+ ..++ -...++.++||+.++++.-. ++.++++.+..++....
T Consensus 205 ~P~i-i~~~g~~~~~~~~eL~~lGv~~v~~~~~~--~raa~~a~~~~l~~~g~ 254 (287)
T 3b8i_A 205 IPLM-LVTYGNPQLRDDARLARLGVRVVVNGHAA--YFAAIKATYDCLREERG 254 (287)
T ss_dssp SCEE-EECTTCGGGCCHHHHHHTTEEEEECCCHH--HHHHHHHHHHHHHHHHT
T ss_pred CCEE-EeCCCCCCCCCHHHHHHcCCcEEEEChHH--HHHHHHHHHHHHHHcCC
Confidence 4444 22 1222 34678999999999999764 55666556667776543
No 113
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=91.38 E-value=2.8 Score=42.10 Aligned_cols=67 Identities=9% Similarity=0.007 Sum_probs=54.4
Q ss_pred cCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHHHhcCCCeEee
Q 018508 93 SFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMF 163 (355)
Q Consensus 93 ~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~aLdaGa~GImv 163 (355)
+-++..+..+...|+|.|+|+.- ..+.+++.+++..++..|..++|=|.. ...+.+++++|++-|-+
T Consensus 117 I~d~~Qi~ea~~~GAD~ILLi~a--~l~~~~l~~l~~~a~~lgm~~LvEvh~--~eE~~~A~~lga~iIGi 183 (452)
T 1pii_A 117 IIDPYQIYLARYYQADACLLMLS--VLDDDQYRQLAAVAHSLEMGVLTEVSN--EEEQERAIALGAKVVGI 183 (452)
T ss_dssp CCSHHHHHHHHHTTCSEEEEETT--TCCHHHHHHHHHHHHHTTCEEEEEECS--HHHHHHHHHTTCSEEEE
T ss_pred cCCHHHHHHHHHcCCCEEEEEcc--cCCHHHHHHHHHHHHHcCCeEEEEeCC--HHHHHHHHHCCCCEEEE
Confidence 45676666688999999999988 456788888888888889999998864 67789999999985444
No 114
>3lg3_A Isocitrate lyase; conserved, CD, proteomics evidence (cytopl periplasmic), drug target functions; 1.40A {Yersinia pestis} SCOP: c.1.12.7 PDB: 1igw_A
Probab=91.30 E-value=13 Score=37.17 Aligned_cols=39 Identities=15% Similarity=0.088 Sum_probs=29.8
Q ss_pred CchHHHHHHHc---CCcEEEEEEecCCHHHHHHhhhcCCcEEEE
Q 018508 72 SPESLKYRLQS---NETLYGLFLLSFSPTLAEISGLAGYDFVVV 112 (355)
Q Consensus 72 ~~n~lk~~L~~---G~~~~gl~v~~~sp~~~e~aa~~G~D~vil 112 (355)
...+|++.|.. +++++ ....-++..+.++..+||+.|++
T Consensus 50 ~a~~Lr~ll~~~~~~~~~~--~~Ga~d~~sA~~~~~aGf~Aiy~ 91 (435)
T 3lg3_A 50 GAKKLWELLHGGSRKGYIN--CLGALTGGQALQQAKAGVEAIYM 91 (435)
T ss_dssp HHHHHHHHHTTTSSSSSEE--EEBCCSHHHHHHHHHHTCCSEEE
T ss_pred HHHHHHHHHHhhccCCcEE--eCCCCcHHHHHHHHHcCCCEEEe
Confidence 34789999988 66533 23456888888888899999987
No 115
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=91.10 E-value=5 Score=32.13 Aligned_cols=102 Identities=15% Similarity=0.032 Sum_probs=64.7
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKA 153 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~a 153 (355)
..+++.|...... +..-.+..+..+.+....+|.|++|+.-...+--++...++. .....++++=....+...+..+
T Consensus 28 ~~l~~~L~~~g~~--v~~~~~~~~a~~~l~~~~~dlvi~D~~l~~~~g~~~~~~l~~-~~~~~~ii~~s~~~~~~~~~~~ 104 (153)
T 3hv2_A 28 QRLQQLLSPLPYT--LHFARDATQALQLLASREVDLVISAAHLPQMDGPTLLARIHQ-QYPSTTRILLTGDPDLKLIAKA 104 (153)
T ss_dssp HHHHHHHTTSSCE--EEEESSHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHH-HCTTSEEEEECCCCCHHHHHHH
T ss_pred HHHHHHhcccCcE--EEEECCHHHHHHHHHcCCCCEEEEeCCCCcCcHHHHHHHHHh-HCCCCeEEEEECCCCHHHHHHH
Confidence 4566677654332 222233445667777888999999998765544444444443 2234556665666677788899
Q ss_pred HhcC-CCeEeecCCCCHHHHHHHHHHc
Q 018508 154 LDLG-PQGVMFPMIDSPEAAKEAVSYC 179 (355)
Q Consensus 154 LdaG-a~GImvP~Vesaeea~~vv~a~ 179 (355)
+..| +++++ ++=-+.+++...++.+
T Consensus 105 ~~~g~~~~~l-~KP~~~~~l~~~i~~~ 130 (153)
T 3hv2_A 105 INEGEIYRYL-SKPWDDQELLLALRQA 130 (153)
T ss_dssp HHTTCCSEEE-CSSCCHHHHHHHHHHH
T ss_pred HhCCCcceEE-eCCCCHHHHHHHHHHH
Confidence 9999 88764 4455678877666544
No 116
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=91.05 E-value=4.2 Score=31.11 Aligned_cols=102 Identities=13% Similarity=0.046 Sum_probs=63.7
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKA 153 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~a 153 (355)
..+++.|......+ ....+..+..+.+....+|.|++|+.-...+--++...++.. ....++++=....+.....++
T Consensus 17 ~~l~~~l~~~~~~v--~~~~~~~~a~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~-~~~~~ii~~s~~~~~~~~~~~ 93 (124)
T 1srr_A 17 ILLNEVFNKEGYQT--FQAANGLQALDIVTKERPDLVLLDMKIPGMDGIEILKRMKVI-DENIRVIIMTAYGELDMIQES 93 (124)
T ss_dssp HHHHHHHHTTTCEE--EEESSHHHHHHHHHHHCCSEEEEESCCTTCCHHHHHHHHHHH-CTTCEEEEEESSCCHHHHHHH
T ss_pred HHHHHHHHHCCcEE--EEeCCHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHh-CCCCCEEEEEccCchHHHHHH
Confidence 45667776533322 222333455666667789999999987654433433344332 233444554455566778889
Q ss_pred HhcCCCeEeecCCCCHHHHHHHHHHc
Q 018508 154 LDLGPQGVMFPMIDSPEAAKEAVSYC 179 (355)
Q Consensus 154 LdaGa~GImvP~Vesaeea~~vv~a~ 179 (355)
+..|+++.+ +|=-+.+++...++.+
T Consensus 94 ~~~g~~~~l-~KP~~~~~l~~~i~~~ 118 (124)
T 1srr_A 94 KELGALTHF-AKPFDIDEIRDAVKKY 118 (124)
T ss_dssp HHHTCCCEE-ESSCCHHHHHHHHHHH
T ss_pred HhcChHhhc-cCCCCHHHHHHHHHHH
Confidence 999998875 5556788888877765
No 117
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=91.04 E-value=1.9 Score=41.23 Aligned_cols=83 Identities=17% Similarity=0.010 Sum_probs=56.4
Q ss_pred HHHHhhhcCCcEEEEeCCCCC-----------CCHHHHHHHHHHHH----h--CCCCeEEcCCCCCH----HHH---HHH
Q 018508 98 LAEISGLAGYDFVVVDMEHGP-----------GGISDALACLHALA----A--TGTPAILRLPESCP----TWA---KKA 153 (355)
Q Consensus 98 ~~e~aa~~G~D~vilDlEh~~-----------~~~~~a~~~i~a~~----~--~g~~~iVRV~~~~~----~~i---~~a 153 (355)
.++.+..+|+..|-|.=+-.+ .+.+++.+-|+++. . .+..++.|+..... ..| +..
T Consensus 108 ~v~~l~~aGaagv~iEDq~~~k~cgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTDa~~~~gldeAi~Ra~ay 187 (307)
T 3lye_A 108 TVEHYIRSGVAGAHLEDQILTKRCGHLSGKKVVSRDEYLVRIRAAVATKRRLRSDFVLIARTDALQSLGYEECIERLRAA 187 (307)
T ss_dssp HHHHHHHTTCCEEEECCBCCCC--------CBCCHHHHHHHHHHHHHHHHHTTCCCEEEEEECCHHHHCHHHHHHHHHHH
T ss_pred HHHHHHHcCCeEEEEcCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEechhhhccCHHHHHHHHHHH
Confidence 456677899998875444322 24556555555442 1 23456778876422 234 445
Q ss_pred HhcCCCeEeecCCCCHHHHHHHHHHcC
Q 018508 154 LDLGPQGVMFPMIDSPEAAKEAVSYCR 180 (355)
Q Consensus 154 LdaGa~GImvP~Vesaeea~~vv~a~~ 180 (355)
.++|||+|++|-+.+.++++++++.+.
T Consensus 188 ~eAGAD~ifi~~~~~~~~~~~i~~~~~ 214 (307)
T 3lye_A 188 RDEGADVGLLEGFRSKEQAAAAVAALA 214 (307)
T ss_dssp HHTTCSEEEECCCSCHHHHHHHHHHHT
T ss_pred HHCCCCEEEecCCCCHHHHHHHHHHcc
Confidence 789999999999999999999999885
No 118
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=90.89 E-value=3.4 Score=32.23 Aligned_cols=103 Identities=9% Similarity=-0.055 Sum_probs=62.9
Q ss_pred hHHHHHHHc-CCcE-EEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHH-HhCCCCeEEcCCCCCHHHH
Q 018508 74 ESLKYRLQS-NETL-YGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHAL-AATGTPAILRLPESCPTWA 150 (355)
Q Consensus 74 n~lk~~L~~-G~~~-~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~-~~~g~~~iVRV~~~~~~~i 150 (355)
..+++.|.. .... +..+ .+..+..+.+....+|.|++|+.-...+--++...++.. .....++++=....+...+
T Consensus 22 ~~l~~~L~~~~~~~~v~~~--~~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~ 99 (143)
T 3cnb_A 22 DMLTQFLENLFPYAKIKIA--YNPFDAGDLLHTVKPDVVMLDLMMVGMDGFSICHRIKSTPATANIIVIAMTGALTDDNV 99 (143)
T ss_dssp HHHHHHHHHHCTTCEEEEE--CSHHHHHHHHHHTCCSEEEEETTCTTSCHHHHHHHHHTSTTTTTSEEEEEESSCCHHHH
T ss_pred HHHHHHHHhccCccEEEEE--CCHHHHHHHHHhcCCCEEEEecccCCCcHHHHHHHHHhCccccCCcEEEEeCCCCHHHH
Confidence 456777765 3332 3322 223445566777789999999987654433333333321 1123455555556667778
Q ss_pred HHHHhcCCCeEeecCCCCHHHHHHHHHHc
Q 018508 151 KKALDLGPQGVMFPMIDSPEAAKEAVSYC 179 (355)
Q Consensus 151 ~~aLdaGa~GImvP~Vesaeea~~vv~a~ 179 (355)
.++++.|+++++ ++--+.+++...++.+
T Consensus 100 ~~~~~~g~~~~l-~kP~~~~~l~~~i~~~ 127 (143)
T 3cnb_A 100 SRIVALGAETCF-GKPLNFTLLEKTIKQL 127 (143)
T ss_dssp HHHHHTTCSEEE-ESSCCHHHHHHHHHHH
T ss_pred HHHHhcCCcEEE-eCCCCHHHHHHHHHHH
Confidence 899999999875 4445788887777654
No 119
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=90.82 E-value=4.3 Score=32.76 Aligned_cols=103 Identities=16% Similarity=0.031 Sum_probs=64.0
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHh-CCCCeEEcCCCCCHHHHHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAA-TGTPAILRLPESCPTWAKK 152 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~-~g~~~iVRV~~~~~~~i~~ 152 (355)
..+++.|+.-...+ ..-.+..+..+.+....+|.|++|++-...+--++...++.... ...++++=....+...+.+
T Consensus 21 ~~l~~~L~~~g~~v--~~~~~~~~al~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~~~~~~~~~ 98 (154)
T 3gt7_A 21 EHLKHILEETGYQT--EHVRNGREAVRFLSLTRPDLIISDVLMPEMDGYALCRWLKGQPDLRTIPVILLTILSDPRDVVR 98 (154)
T ss_dssp HHHHHHHHTTTCEE--EEESSHHHHHHHHTTCCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEECCCSHHHHHH
T ss_pred HHHHHHHHHCCCEE--EEeCCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCCCcCCCCEEEEECCCChHHHHH
Confidence 45777777644333 22233345567777788999999998765554444444443221 3345555455566778889
Q ss_pred HHhcCCCeEeecCCCCHHHHHHHHHHc
Q 018508 153 ALDLGPQGVMFPMIDSPEAAKEAVSYC 179 (355)
Q Consensus 153 aLdaGa~GImvP~Vesaeea~~vv~a~ 179 (355)
+++.|+++++. |=-+.+++...++.+
T Consensus 99 ~~~~g~~~~l~-KP~~~~~l~~~i~~~ 124 (154)
T 3gt7_A 99 SLECGADDFIT-KPCKDVVLASHVKRL 124 (154)
T ss_dssp HHHHCCSEEEE-SSCCHHHHHHHHHHH
T ss_pred HHHCCCCEEEe-CCCCHHHHHHHHHHH
Confidence 99999998654 445677776665543
No 120
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=90.76 E-value=5 Score=31.50 Aligned_cols=102 Identities=16% Similarity=0.074 Sum_probs=61.9
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhh--hcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISG--LAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAK 151 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa--~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~ 151 (355)
..+++.|...... +..-.+..+..+.+. ...+|.|++|++-...+--++...++.. ....+++|=....+...+.
T Consensus 17 ~~l~~~l~~~g~~--v~~~~~~~~a~~~~~~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~-~~~~~ii~ls~~~~~~~~~ 93 (143)
T 3jte_A 17 QNIKFLLEIDGNE--VLTASSSTEGLRIFTENCNSIDVVITDMKMPKLSGMDILREIKKI-TPHMAVIILTGHGDLDNAI 93 (143)
T ss_dssp HHHHHHHHHTTCE--EEEESSHHHHHHHHHHTTTTCCEEEEESCCSSSCHHHHHHHHHHH-CTTCEEEEEECTTCHHHHH
T ss_pred HHHHHHHHhCCce--EEEeCCHHHHHHHHHhCCCCCCEEEEeCCCCCCcHHHHHHHHHHh-CCCCeEEEEECCCCHHHHH
Confidence 3466667643332 222233344555665 4679999999987654444444444432 2334555555556677788
Q ss_pred HHHhcCCCeEeecCCCCHHHHHHHHHHc
Q 018508 152 KALDLGPQGVMFPMIDSPEAAKEAVSYC 179 (355)
Q Consensus 152 ~aLdaGa~GImvP~Vesaeea~~vv~a~ 179 (355)
++++.|+++++. +=-+.+++...++.+
T Consensus 94 ~~~~~g~~~~l~-kp~~~~~l~~~l~~~ 120 (143)
T 3jte_A 94 LAMKEGAFEYLR-KPVTAQDLSIAINNA 120 (143)
T ss_dssp HHHHTTCSEEEE-SSCCHHHHHHHHHHH
T ss_pred HHHHhCcceeEe-CCCCHHHHHHHHHHH
Confidence 999999998643 445778877666544
No 121
>3i4e_A Isocitrate lyase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.69A {Burkholderia pseudomallei}
Probab=90.74 E-value=15 Score=36.82 Aligned_cols=38 Identities=16% Similarity=0.063 Sum_probs=30.3
Q ss_pred chHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEE
Q 018508 73 PESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVV 112 (355)
Q Consensus 73 ~n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vil 112 (355)
...||+.|..+++++ ....-++..+.++..+||+.|++
T Consensus 54 a~~Lr~ll~~~~~l~--~~Ga~D~~sA~~~~~aGf~Aiy~ 91 (439)
T 3i4e_A 54 AEKLWTLINNEPFVN--ALGALTGNQAMQQVKAGLKAIYL 91 (439)
T ss_dssp HHHHHHHHHHSSCEE--EEBCCSHHHHHHHHHHTCSCEEE
T ss_pred HHHHHHHHhcCCCEE--eCCCCCHHHHHHHHHhCCCEEEe
Confidence 478999999988753 23456888888888899999987
No 122
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=90.64 E-value=1.1 Score=42.54 Aligned_cols=85 Identities=9% Similarity=0.028 Sum_probs=56.8
Q ss_pred HHHHhhhcCCcEEEEeCCCC-----------CCCHHHHHHHHHHHHh----CCCCeEEcCCCCC----HHHH---HHHHh
Q 018508 98 LAEISGLAGYDFVVVDMEHG-----------PGGISDALACLHALAA----TGTPAILRLPESC----PTWA---KKALD 155 (355)
Q Consensus 98 ~~e~aa~~G~D~vilDlEh~-----------~~~~~~a~~~i~a~~~----~g~~~iVRV~~~~----~~~i---~~aLd 155 (355)
.+..+..+|++.|-|.-.-+ ....++....|+++.. .+..+.-|..... ...| ++..+
T Consensus 99 ~v~~l~~aGa~gv~iEd~~~~k~cgH~~gk~L~p~~~~~~~I~Aa~~a~~~~~~~i~aRtda~~~~gl~~ai~ra~ay~e 178 (295)
T 1xg4_A 99 TVKSMIKAGAAGLHIEDQVGAKRSGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMARTDALAVEGLDAAIERAQAYVE 178 (295)
T ss_dssp HHHHHHHHTCSEEEEECBCSSCCCTTSSSCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECCHHHHCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCeEEEECCCCCCcccCCCCCCccCCHHHHHHHHHHHHHhccCCCcEEEEecHHhhhcCHHHHHHHHHHHHH
Confidence 44556678999887755532 2345555555655532 2344667876432 1223 45668
Q ss_pred cCCCeEeecCCCCHHHHHHHHHHcCCC
Q 018508 156 LGPQGVMFPMIDSPEAAKEAVSYCRFP 182 (355)
Q Consensus 156 aGa~GImvP~Vesaeea~~vv~a~~~p 182 (355)
+||++|+++.+.+.++++++.+.+.-|
T Consensus 179 AGAd~i~~e~~~~~~~~~~i~~~~~iP 205 (295)
T 1xg4_A 179 AGAEMLFPEAITELAMYRQFADAVQVP 205 (295)
T ss_dssp TTCSEEEETTCCSHHHHHHHHHHHCSC
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHcCCC
Confidence 999999999999999999999998743
No 123
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=90.52 E-value=2.9 Score=33.07 Aligned_cols=103 Identities=8% Similarity=0.024 Sum_probs=63.0
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHH-HhCCCCeEEcCCCCCHHHHHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHAL-AATGTPAILRLPESCPTWAKK 152 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~-~~~g~~~iVRV~~~~~~~i~~ 152 (355)
..+++.|..-. +-+....+..+..+.+....+|.|++|++-...+--++...++.. .....++++=....+...+..
T Consensus 22 ~~l~~~L~~~g--~~v~~~~~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~pii~ls~~~~~~~~~~ 99 (147)
T 2zay_A 22 AASISALSQEG--FDIIQCGNAIEAVPVAVKTHPHLIITEANMPKISGMDLFNSLKKNPQTASIPVIALSGRATAKEEAQ 99 (147)
T ss_dssp HHHHHHHHHHT--EEEEEESSHHHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHTSTTTTTSCEEEEESSCCHHHHHH
T ss_pred HHHHHHHHHcC--CeEEEeCCHHHHHHHHHcCCCCEEEEcCCCCCCCHHHHHHHHHcCcccCCCCEEEEeCCCCHHHHHH
Confidence 56777776522 223322333445666777789999999987654433333333321 123455565556666777889
Q ss_pred HHhcCCCeEeecCCCCHHHHHHHHHHc
Q 018508 153 ALDLGPQGVMFPMIDSPEAAKEAVSYC 179 (355)
Q Consensus 153 aLdaGa~GImvP~Vesaeea~~vv~a~ 179 (355)
+++.|+++++ ++--+.+++...++.+
T Consensus 100 ~~~~g~~~~l-~kp~~~~~L~~~i~~~ 125 (147)
T 2zay_A 100 LLDMGFIDFI-AKPVNAIRLSARIKRV 125 (147)
T ss_dssp HHHHTCSEEE-ESSCCHHHHHHHHHHH
T ss_pred HHhCCCCEEE-eCCCCHHHHHHHHHHH
Confidence 9999999875 4445678877666544
No 124
>1dz3_A Stage 0 sporulation protein A; response regulator, domain swapping; 1.65A {Bacillus stearothermophilus} SCOP: c.23.1.1 PDB: 1qmp_A*
Probab=90.50 E-value=2.8 Score=32.48 Aligned_cols=104 Identities=13% Similarity=0.008 Sum_probs=59.8
Q ss_pred hHHHHHHHcCCcEEEEEEecCC-HHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFS-PTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKK 152 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~s-p~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~ 152 (355)
..+++.|..- +-+-......+ .+..+.+....+|.|++|+.-...+--++...++.......++++=....+.....+
T Consensus 16 ~~l~~~l~~~-~~~~~~~~~~~~~~a~~~~~~~~~dlvllD~~l~~~~g~~~~~~l~~~~~~~~~ii~ls~~~~~~~~~~ 94 (130)
T 1dz3_A 16 SLLDEYISSQ-PDMEVIGTAYNGQDCLQMLEEKRPDILLLDIIMPHLDGLAVLERIRAGFEHQPNVIMLTAFGQEDVTKK 94 (130)
T ss_dssp HHHHHHHHTS-TTEEEEEEESSHHHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHHHCSSCCEEEEEEETTCHHHHHH
T ss_pred HHHHHHHHhC-CCceEEEEeCCHHHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCcEEEEecCCCHHHHHH
Confidence 3456666542 11222212333 455666667789999999987654444444444432112333444444556677888
Q ss_pred HHhcCCCeEeecCCCCHHHHHHHHHHc
Q 018508 153 ALDLGPQGVMFPMIDSPEAAKEAVSYC 179 (355)
Q Consensus 153 aLdaGa~GImvP~Vesaeea~~vv~a~ 179 (355)
+++.|+++++ +|=-+.+++...++.+
T Consensus 95 ~~~~ga~~~l-~KP~~~~~l~~~i~~~ 120 (130)
T 1dz3_A 95 AVELGASYFI-LKPFDMENLAHHIRQV 120 (130)
T ss_dssp HHHTTCEEEE-ECSSCCTTHHHHHHHH
T ss_pred HHHcCCCEEE-eCCCCHHHHHHHHHHH
Confidence 9999998865 3334566776666554
No 125
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=90.44 E-value=2 Score=33.80 Aligned_cols=103 Identities=9% Similarity=-0.018 Sum_probs=61.6
Q ss_pred hHHHHHHHcCCc--EEEEEEecCCHHHHHHhhh----------cCCcEEEEeCCCCCCCHHHHHHHHHHHH-hCCCCeEE
Q 018508 74 ESLKYRLQSNET--LYGLFLLSFSPTLAEISGL----------AGYDFVVVDMEHGPGGISDALACLHALA-ATGTPAIL 140 (355)
Q Consensus 74 n~lk~~L~~G~~--~~gl~v~~~sp~~~e~aa~----------~G~D~vilDlEh~~~~~~~a~~~i~a~~-~~g~~~iV 140 (355)
..+++.|..-.. .+.. -.+..+..+.+.. ..+|.|++|++-...+--++...++... ....++++
T Consensus 20 ~~l~~~L~~~g~~~~v~~--~~~~~~al~~l~~~~~~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~ 97 (149)
T 1k66_A 20 STFQRLLQREGVVNPIYR--CITGDQALDFLYQTGSYCNPDIAPRPAVILLDLNLPGTDGREVLQEIKQDEVLKKIPVVI 97 (149)
T ss_dssp HHHHHHHHHTTBCSCEEE--ECSHHHHHHHHHTCCSSSCGGGCCCCSEEEECSCCSSSCHHHHHHHHTTSTTGGGSCEEE
T ss_pred HHHHHHHHHcCCCceEEE--ECCHHHHHHHHHhcccccCcccCCCCcEEEEECCCCCCCHHHHHHHHHhCcccCCCeEEE
Confidence 456677765332 2222 2233445555554 6799999999876544333333333211 13345565
Q ss_pred cCCCCCHHHHHHHHhcCCCeEeecCCCCHHHHHHHHHHc
Q 018508 141 RLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYC 179 (355)
Q Consensus 141 RV~~~~~~~i~~aLdaGa~GImvP~Vesaeea~~vv~a~ 179 (355)
=....+...+..+++.|+++++ ++--+.+++...++.+
T Consensus 98 ~t~~~~~~~~~~~~~~g~~~~l-~kP~~~~~l~~~i~~~ 135 (149)
T 1k66_A 98 MTTSSNPKDIEICYSYSISSYI-VKPLEIDRLTETVQTF 135 (149)
T ss_dssp EESCCCHHHHHHHHHTTCSEEE-ECCSSHHHHHHHHHHH
T ss_pred EeCCCCHHHHHHHHHCCCCEEE-eCCCCHHHHHHHHHHH
Confidence 5566667788899999999875 4555788887666554
No 126
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=90.40 E-value=4.7 Score=30.62 Aligned_cols=101 Identities=13% Similarity=0.002 Sum_probs=59.7
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKA 153 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~a 153 (355)
..+++.|......+ ....+..+..+.+....+|.+++|++-...+--++...++. ....++++=....+......+
T Consensus 16 ~~l~~~L~~~~~~v--~~~~~~~~~~~~~~~~~~dlvi~d~~l~~~~g~~~~~~l~~--~~~~~ii~~s~~~~~~~~~~~ 91 (122)
T 1zgz_A 16 ARLQSYFTQEGYTV--SVTASGAGLREIMQNQSVDLILLDINLPDENGLMLTRALRE--RSTVGIILVTGRSDRIDRIVG 91 (122)
T ss_dssp HHHHHHHHHTTCEE--EEESSHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHT--TCCCEEEEEESSCCHHHHHHH
T ss_pred HHHHHHHHHCCCeE--EEecCHHHHHHHHhcCCCCEEEEeCCCCCCChHHHHHHHHh--cCCCCEEEEECCCChhhHHHH
Confidence 45666676433322 22233344556666677999999998765443333333332 233444444455566677889
Q ss_pred HhcCCCeEeecCCCCHHHHHHHHHHc
Q 018508 154 LDLGPQGVMFPMIDSPEAAKEAVSYC 179 (355)
Q Consensus 154 LdaGa~GImvP~Vesaeea~~vv~a~ 179 (355)
++.|+++++. |--+.+++...++.+
T Consensus 92 ~~~ga~~~l~-Kp~~~~~l~~~i~~~ 116 (122)
T 1zgz_A 92 LEMGADDYVT-KPLELRELVVRVKNL 116 (122)
T ss_dssp HHHTCSEEEE-SSCCHHHHHHHHHHH
T ss_pred HHhCHHHHcc-CCCCHHHHHHHHHHH
Confidence 9999998654 334677777666543
No 127
>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}
Probab=90.35 E-value=5.4 Score=31.19 Aligned_cols=107 Identities=6% Similarity=-0.145 Sum_probs=68.6
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhhh-----cCCcEEEEeCCCCCCCHHHHHHHHHHH---HhCCCCeEEcCCCC
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISGL-----AGYDFVVVDMEHGPGGISDALACLHAL---AATGTPAILRLPES 145 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~-----~G~D~vilDlEh~~~~~~~a~~~i~a~---~~~g~~~iVRV~~~ 145 (355)
..+++.|.......-+..-.+..+..+.+.. ..+|.|++|+.-...+--++...++.. .....++++=....
T Consensus 23 ~~l~~~l~~~~~~~~v~~~~~~~~a~~~l~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~~~ii~~t~~~ 102 (146)
T 3ilh_A 23 FLNTTIIRMTHRVEEIQSVTSGNAAINKLNELYAAGRWPSIICIDINMPGINGWELIDLFKQHFQPMKNKSIVCLLSSSL 102 (146)
T ss_dssp HHHHHHHHTTCCEEEEEEESSHHHHHHHHHHHHTSSCCCSEEEEESSCSSSCHHHHHHHHHHHCGGGTTTCEEEEECSSC
T ss_pred HHHHHHHHhcCCCeeeeecCCHHHHHHHHHHhhccCCCCCEEEEcCCCCCCCHHHHHHHHHHhhhhccCCCeEEEEeCCC
Confidence 4566777665542222322334445566666 779999999987655544554555542 12344555555666
Q ss_pred CHHHHHHHHhcC-CCeEeecCCCCHHHHHHHHHHcCC
Q 018508 146 CPTWAKKALDLG-PQGVMFPMIDSPEAAKEAVSYCRF 181 (355)
Q Consensus 146 ~~~~i~~aLdaG-a~GImvP~Vesaeea~~vv~a~~~ 181 (355)
+.....+++..| +++++ +|=-+.+++...++.+..
T Consensus 103 ~~~~~~~~~~~g~~~~~l-~KP~~~~~L~~~i~~~~~ 138 (146)
T 3ilh_A 103 DPRDQAKAEASDWVDYYV-SKPLTANALNNLYNKVLN 138 (146)
T ss_dssp CHHHHHHHHHCSSCCEEE-CSSCCHHHHHHHHHHHHC
T ss_pred ChHHHHHHHhcCCcceee-eCCCCHHHHHHHHHHHHH
Confidence 777888999999 88864 455678999888877654
No 128
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=90.35 E-value=5.9 Score=32.01 Aligned_cols=103 Identities=10% Similarity=-0.049 Sum_probs=63.9
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhhhc--CCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISGLA--GYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAK 151 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~--G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~ 151 (355)
..+++.|..-...+ ...-.+..+..+.+... .+|.|++|+.-...+--++...++.. ....++++=....+...+.
T Consensus 50 ~~l~~~L~~~g~~v-~~~~~~~~~al~~l~~~~~~~dliilD~~l~~~~g~~~~~~lr~~-~~~~~ii~ls~~~~~~~~~ 127 (157)
T 3hzh_A 50 KQLTQIFTSEGFNI-IDTAADGEEAVIKYKNHYPNIDIVTLXITMPKMDGITCLSNIMEF-DKNARVIMISALGKEQLVK 127 (157)
T ss_dssp HHHHHHHHHTTCEE-EEEESSHHHHHHHHHHHGGGCCEEEECSSCSSSCHHHHHHHHHHH-CTTCCEEEEESCCCHHHHH
T ss_pred HHHHHHHHhCCCeE-EEEECCHHHHHHHHHhcCCCCCEEEEeccCCCccHHHHHHHHHhh-CCCCcEEEEeccCcHHHHH
Confidence 45666776433222 11223334456666666 79999999987655544444444432 2345555555666777888
Q ss_pred HHHhcCCCeEeecCCCCHHHHHHHHHHc
Q 018508 152 KALDLGPQGVMFPMIDSPEAAKEAVSYC 179 (355)
Q Consensus 152 ~aLdaGa~GImvP~Vesaeea~~vv~a~ 179 (355)
++++.|+++++ +|=-+.+++...++.+
T Consensus 128 ~~~~~g~~~~l-~KP~~~~~l~~~i~~~ 154 (157)
T 3hzh_A 128 DCLIKGAKTFI-VKPLDRAKVLQRVMSV 154 (157)
T ss_dssp HHHHTTCSEEE-ESSCCHHHHHHHHHHT
T ss_pred HHHHcCCCEEE-eCCCCHHHHHHHHHHH
Confidence 99999999865 4555778887777654
No 129
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=90.21 E-value=3.3 Score=38.76 Aligned_cols=67 Identities=18% Similarity=0.085 Sum_probs=54.6
Q ss_pred cCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHHHhcCCCeEee
Q 018508 93 SFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMF 163 (355)
Q Consensus 93 ~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~aLdaGa~GImv 163 (355)
+-++..+..+...|+|.|+|+... .+.+++++++..+...|..++|=|. +...+.++++.|++-|-+
T Consensus 129 i~d~~qi~ea~~~GAD~VlLi~a~--L~~~~l~~l~~~a~~lGl~~lvevh--~~eEl~~A~~~ga~iIGi 195 (272)
T 3tsm_A 129 LFDPYQVYEARSWGADCILIIMAS--VDDDLAKELEDTAFALGMDALIEVH--DEAEMERALKLSSRLLGV 195 (272)
T ss_dssp CCSTHHHHHHHHTTCSEEEEETTT--SCHHHHHHHHHHHHHTTCEEEEEEC--SHHHHHHHTTSCCSEEEE
T ss_pred cCCHHHHHHHHHcCCCEEEEcccc--cCHHHHHHHHHHHHHcCCeEEEEeC--CHHHHHHHHhcCCCEEEE
Confidence 467878888999999999999874 4567888888888888999998875 467789999999985544
No 130
>1jqn_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta barrel, Mn2+ and DCDP complex, lyase; HET: DCO; 2.35A {Escherichia coli} SCOP: c.1.12.3 PDB: 1fiy_A* 1qb4_A
Probab=90.13 E-value=0.55 Score=50.96 Aligned_cols=95 Identities=14% Similarity=0.155 Sum_probs=77.0
Q ss_pred CCeEeecCCCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEEccHHHHHHHHHHhc----
Q 018508 158 PQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKRAEDIAA---- 233 (355)
Q Consensus 158 a~GImvP~Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mIET~~av~nieeIaa---- 233 (355)
....+++|++++.++.++.-..|.. |. ...+.|+++.||.+.++|+++|+.
T Consensus 469 ~~~yIISmt~s~sDvL~V~~L~ke~--Gl-----------------------~~~l~VvPLFETi~DL~~a~~im~~ll~ 523 (883)
T 1jqn_A 469 IAAYVISMAKTPSDVLAVHLLLKEA--GI-----------------------GFAMPVAPLFETLDDLNNANDVMTQLLN 523 (883)
T ss_dssp EEEEEEETCCSHHHHHHHHHHHHTT--TC-----------------------CSCCCEEEEECSHHHHHHHHHHHHHHHH
T ss_pred cCeEEeCCCCCHHHHHHHHHHHHHh--CC-----------------------CCCcCeeCCCCCHHHHHhHHHHHHHHHh
Confidence 3569999999999999999888753 21 125789999999999999999984
Q ss_pred -------cCCccEEEEChhhHHhhcCCCCCCCCHHHHHHHHHHHHHHHhCCCc
Q 018508 234 -------VDGVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVAEKGVLGGGKA 279 (355)
Q Consensus 234 -------vpgVD~l~iGp~DLs~slG~~~~~~~p~v~~ai~~iv~aa~a~g~~ 279 (355)
+.+.=-||+|-.|=+.+-|+.. ..-++..+..++.+.|+++|++
T Consensus 524 ~p~yr~~l~~~qeVMlGYSDS~KD~G~la--A~w~ly~Aq~~L~~v~~~~gV~ 574 (883)
T 1jqn_A 524 IDWYRGLIQGKQMVMIGYSDSAKDAGVMA--ASWAQYQAQDALIKTCEKAGIE 574 (883)
T ss_dssp SHHHHHHTTTEEEEEECHHHHHHHHCHHH--HHHHHHHHHHHHHHHHHHHTCE
T ss_pred ChHHHHhhCCeEEEEEeeccccccccHHH--HHHHHHHHHHHHHHHHHHcCCe
Confidence 2456689999999888888642 2346788899999999999987
No 131
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=90.11 E-value=2.1 Score=43.51 Aligned_cols=76 Identities=18% Similarity=0.145 Sum_probs=49.8
Q ss_pred CcEEEEEEecC--CHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHh-CC-CCeEE-cCCCCCHHHHHHHHhcCC
Q 018508 84 ETLYGLFLLSF--SPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAA-TG-TPAIL-RLPESCPTWAKKALDLGP 158 (355)
Q Consensus 84 ~~~~gl~v~~~--sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~-~g-~~~iV-RV~~~~~~~i~~aLdaGa 158 (355)
+..++.-+... ..+.++.+...|+|.|++|..|+- .....+.++.++. .+ .++++ -| ......+.+.++|+
T Consensus 244 rl~V~aavg~~~d~~era~aLveaGvd~I~Id~a~g~--~~~v~~~i~~i~~~~~~~~vi~g~v--~t~e~a~~~~~aGa 319 (511)
T 3usb_A 244 RLLVGAAVGVTADAMTRIDALVKASVDAIVLDTAHGH--SQGVIDKVKEVRAKYPSLNIIAGNV--ATAEATKALIEAGA 319 (511)
T ss_dssp CBCCEEEECSSTTHHHHHHHHHHTTCSEEEEECSCTT--SHHHHHHHHHHHHHCTTSEEEEEEE--CSHHHHHHHHHHTC
T ss_pred ceeeeeeeeeccchHHHHHHHHhhccceEEecccccc--hhhhhhHHHHHHHhCCCceEEeeee--ccHHHHHHHHHhCC
Confidence 33445554433 356777888999999999999863 2344556655542 33 44443 23 35677889999999
Q ss_pred CeEee
Q 018508 159 QGVMF 163 (355)
Q Consensus 159 ~GImv 163 (355)
++|.+
T Consensus 320 d~i~v 324 (511)
T 3usb_A 320 NVVKV 324 (511)
T ss_dssp SEEEE
T ss_pred CEEEE
Confidence 99986
No 132
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=90.11 E-value=1.2 Score=43.52 Aligned_cols=89 Identities=16% Similarity=-0.002 Sum_probs=58.1
Q ss_pred CchHHHHHHHcCCcEEEEEEec--CCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHh--CCCCeEEcCCCCCH
Q 018508 72 SPESLKYRLQSNETLYGLFLLS--FSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAA--TGTPAILRLPESCP 147 (355)
Q Consensus 72 ~~n~lk~~L~~G~~~~gl~v~~--~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~--~g~~~iVRV~~~~~ 147 (355)
.+..+.+.++.-+..++..+.. ...+.++.+..+|+|+|.+|..|+.. +...+.++.++. .+.++++. +-.++
T Consensus 76 s~ee~~~~i~~~~~~~~~~~g~~~~~~e~~~~a~~aGvdvI~id~a~G~~--~~~~e~I~~ir~~~~~~~Vi~G-~V~T~ 152 (361)
T 3r2g_A 76 TIEENIQEFKKCKGPVFVSVGCTENELQRAEALRDAGADFFCVDVAHAHA--KYVGKTLKSLRQLLGSRCIMAG-NVATY 152 (361)
T ss_dssp CHHHHHHHHHTCCSCCBEEECSSHHHHHHHHHHHHTTCCEEEEECSCCSS--HHHHHHHHHHHHHHTTCEEEEE-EECSH
T ss_pred CHHHHHHHHhhcceEEEEEcCCCHHHHHHHHHHHHcCCCEEEEeCCCCCc--HhHHHHHHHHHHhcCCCeEEEc-CcCCH
Confidence 3445666665544444444322 23457788889999999999998742 233445555543 36677774 12357
Q ss_pred HHHHHHHhcCCCeEee
Q 018508 148 TWAKKALDLGPQGVMF 163 (355)
Q Consensus 148 ~~i~~aLdaGa~GImv 163 (355)
...+.+.++|+|+|.+
T Consensus 153 e~A~~a~~aGaD~I~V 168 (361)
T 3r2g_A 153 AGADYLASCGADIIKA 168 (361)
T ss_dssp HHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHcCCCEEEE
Confidence 7889999999999998
No 133
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=90.06 E-value=4.3 Score=31.35 Aligned_cols=104 Identities=10% Similarity=-0.022 Sum_probs=62.9
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKA 153 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~a 153 (355)
..+++.|......+ ..-.+..+..+.+....+|.|++|+.-...+--++...++.......+++|=+...+...+.++
T Consensus 20 ~~l~~~L~~~g~~v--~~~~~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~~~~~~~~~~~~ 97 (132)
T 3lte_A 20 AAIERVLKRDHWQV--EIAHNGFDAGIKLSTFEPAIMTLDLSMPKLDGLDVIRSLRQNKVANQPKILVVSGLDKAKLQQA 97 (132)
T ss_dssp HHHHHHHHHTTCEE--EEESSHHHHHHHHHHTCCSEEEEESCBTTBCHHHHHHHHHTTTCSSCCEEEEECCSCSHHHHHH
T ss_pred HHHHHHHHHCCcEE--EEeCCHHHHHHHHHhcCCCEEEEecCCCCCCHHHHHHHHHhcCccCCCeEEEEeCCChHHHHHH
Confidence 45667776533332 2223344566777788899999999865444333333333221113445444455555578889
Q ss_pred HhcCCCeEeecCCCCHHHHHHHHHHcC
Q 018508 154 LDLGPQGVMFPMIDSPEAAKEAVSYCR 180 (355)
Q Consensus 154 LdaGa~GImvP~Vesaeea~~vv~a~~ 180 (355)
++.|+++++. +=-+.+++...++.+.
T Consensus 98 ~~~g~~~~l~-kP~~~~~l~~~i~~~~ 123 (132)
T 3lte_A 98 VTEGADDYLE-KPFDNDALLDRIHDLV 123 (132)
T ss_dssp HHHTCCEEEC-SSCCHHHHHHHHHHHH
T ss_pred HHhChHHHhh-CCCCHHHHHHHHHHHc
Confidence 9999998654 4457788887776654
No 134
>1jqo_A Phosphoenolpyruvate carboxylase; beta barrel, carbon dioxide fixation, lyase; 3.00A {Zea mays} SCOP: c.1.12.3
Probab=90.01 E-value=0.65 Score=50.85 Aligned_cols=102 Identities=18% Similarity=0.140 Sum_probs=80.2
Q ss_pred HHHHhcCCC---eEeecCCCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEEccHHHHHH
Q 018508 151 KKALDLGPQ---GVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKR 227 (355)
Q Consensus 151 ~~aLdaGa~---GImvP~Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mIET~~av~n 227 (355)
+.+-+.|.+ ..++||++++.++.++.-.+|.. |. ...+.|++.+||.+.++|
T Consensus 519 ~~i~~~g~~a~~~yIISmt~s~sDvL~V~~L~ke~--Gl-----------------------~~~l~VVPLFETi~DL~~ 573 (970)
T 1jqo_A 519 HVLAELPPDSFGPYIISMATAPSDVLAVELLQREC--GV-----------------------RQPLPVVPLFERLADLQS 573 (970)
T ss_dssp HHHHHSCSTTEEEEEETTCCSTHHHHHHHHHHHHT--CC-----------------------SSCCCEEEEECSHHHHHT
T ss_pred HHHHHhChhhhCeEEeCCCCCHHHHHHHHHHHHHc--CC-----------------------CCCCCeeCCCCCHHHHHh
Confidence 444456654 58999999999999998887743 21 124789999999999999
Q ss_pred HHHHhc----c-------CCccEEEEChhhHHhhcCCCCCCCCHHHHHHHHHHHHHHHhCCCc
Q 018508 228 AEDIAA----V-------DGVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVAEKGVLGGGKA 279 (355)
Q Consensus 228 ieeIaa----v-------pgVD~l~iGp~DLs~slG~~~~~~~p~v~~ai~~iv~aa~a~g~~ 279 (355)
+++|+. . .+.=-||+|-.|=+.+-|+.. ..-++..+..++.+.|+++|++
T Consensus 574 a~~im~~ll~~p~yr~~l~~~QeVMLGYSDS~KD~G~la--A~w~ly~Aq~~L~~v~~~~gV~ 634 (970)
T 1jqo_A 574 APASVERLFSVDWYMDRIKGKQQVMVGYSDSGKDAGRLS--AAWQLYRAQEEMAQVAKRYGVK 634 (970)
T ss_dssp HHHHHHHHHTCHHHHHHHTSEEEEEEESTTHHHHSCHHH--HHHHHHHHHHHHHHHHHTTTCE
T ss_pred HHHHHHHHHhChHHHHhhCCeEEEEEecccccccccHHH--HHHHHHHHHHHHHHHHHHcCCc
Confidence 999984 2 456689999999888888642 2346788999999999999987
No 135
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=89.99 E-value=4.1 Score=37.10 Aligned_cols=85 Identities=21% Similarity=0.180 Sum_probs=54.3
Q ss_pred HHHHHHhhhcCCcEEEEeCCCCCCCHH----HHHHHHHHHHhCCCCeEEcC--------CCCCHH---HH-HHHHhcCCC
Q 018508 96 PTLAEISGLAGYDFVVVDMEHGPGGIS----DALACLHALAATGTPAILRL--------PESCPT---WA-KKALDLGPQ 159 (355)
Q Consensus 96 p~~~e~aa~~G~D~vilDlEh~~~~~~----~a~~~i~a~~~~g~~~iVRV--------~~~~~~---~i-~~aLdaGa~ 159 (355)
...++.+...|+|+|-+.+-.+..+.+ .++.++..++..|.+++|-+ .+.+.. .+ +.+.+.|++
T Consensus 102 ~~~v~~a~~~Ga~~v~~~l~~~~~~~~~~~~~~~~v~~~~~~~g~~viv~~~~~G~~l~~~~~~~~~~~~a~~a~~~Gad 181 (273)
T 2qjg_A 102 VTTVEEAIRMGADAVSIHVNVGSDEDWEAYRDLGMIAETCEYWGMPLIAMMYPRGKHIQNERDPELVAHAARLGAELGAD 181 (273)
T ss_dssp CSCHHHHHHTTCSEEEEEEEETSTTHHHHHHHHHHHHHHHHHHTCCEEEEEEECSTTCSCTTCHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHcCCCEEEEEEecCCCCHHHHHHHHHHHHHHHHHcCCCEEEEeCCCCcccCCCCCHhHHHHHHHHHHHcCCC
Confidence 467888889999999444333333333 34445555556677777644 112332 23 678889999
Q ss_pred eEeecCCCCHHHHHHHHHHcC
Q 018508 160 GVMFPMIDSPEAAKEAVSYCR 180 (355)
Q Consensus 160 GImvP~Vesaeea~~vv~a~~ 180 (355)
.|.+...-+.+.++++.+.+.
T Consensus 182 ~i~~~~~~~~~~l~~i~~~~~ 202 (273)
T 2qjg_A 182 IVKTSYTGDIDSFRDVVKGCP 202 (273)
T ss_dssp EEEECCCSSHHHHHHHHHHCS
T ss_pred EEEECCCCCHHHHHHHHHhCC
Confidence 888765567787888777664
No 136
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=89.98 E-value=0.65 Score=41.81 Aligned_cols=122 Identities=18% Similarity=0.175 Sum_probs=65.5
Q ss_pred HHHHHhcCCCeEeecCC---CCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEE-ccHHHH
Q 018508 150 AKKALDLGPQGVMFPMI---DSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQV-ESEEGV 225 (355)
Q Consensus 150 i~~aLdaGa~GImvP~V---esaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mI-ET~~av 225 (355)
+..+.++|+++|++++. ...+++++.++.++.. .+.+++.| |+.+ .
T Consensus 75 ~~~~~~~Gad~Vll~~ser~l~~~e~~~~~~~a~~~-----------------------------Gl~~iv~v~~~~e-~ 124 (219)
T 2h6r_A 75 AEAIKDCGCKGTLINHSEKRMLLADIEAVINKCKNL-----------------------------GLETIVCTNNINT-S 124 (219)
T ss_dssp HHHHHHHTCCEEEESBTTBCCBHHHHHHHHHHHHHH-----------------------------TCEEEEEESSSHH-H
T ss_pred HHHHHHcCCCEEEECCccccCCHHHHHHHHHHHHHC-----------------------------CCeEEEEeCCchH-H
Confidence 67888999999999995 5567888888776521 12333333 5554 3
Q ss_pred HHHHHHhccCCccEEEEChhhHHhhcCCCCCCCCHH-HHHHHHHHHHHHHhCCCceeecccC-CchhHHHHHHCCCCEEE
Q 018508 226 KRAEDIAAVDGVDCVQMGPLDLSASMGYLWDPGHRK-VREMMRVAEKGVLGGGKAYLAGFAM-PHDAPLEMKSRGYHMVS 303 (355)
Q Consensus 226 ~nieeIaavpgVD~l~iGp~DLs~slG~~~~~~~p~-v~~ai~~iv~aa~a~g~~~~g~~~~-d~~~a~~~~~~G~~~vs 303 (355)
+.+. .+ +.+.+.+.|-++-. .|..-....|+ +.... +.++... .+.+++.+..- +++.++.+.+.|++.+.
T Consensus 125 ~~~~---~~-~~~~i~~~~~~~iG-tG~~~~t~~~~~~~~~~-~~ir~~~-~~~~ii~ggGI~~~~~~~~~~~~gaDgvl 197 (219)
T 2h6r_A 125 KAVA---AL-SPDCIAVEPPELIG-TGIPVSKANPEVVEGTV-RAVKEIN-KDVKVLCGAGISKGEDVKAALDLGAEGVL 197 (219)
T ss_dssp HHHT---TT-CCSEEEECCCC---------------CSHHHH-HHHHHHC-TTCEEEECSSCCSHHHHHHHHTTTCCCEE
T ss_pred HHHH---hC-CCCEEEEEeccccc-cCCCCccCCHHHHHHHH-HHHHhcc-CCCeEEEEeCcCcHHHHHHHhhCCCCEEE
Confidence 3333 32 45788888877632 33110111122 22222 1222221 23443333333 46788888999999999
Q ss_pred ecchH
Q 018508 304 GAVDV 308 (355)
Q Consensus 304 ~~~D~ 308 (355)
+|+-.
T Consensus 198 VGsAi 202 (219)
T 2h6r_A 198 LASGV 202 (219)
T ss_dssp ESHHH
T ss_pred EcHHH
Confidence 99543
No 137
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=89.97 E-value=0.79 Score=42.28 Aligned_cols=71 Identities=8% Similarity=0.060 Sum_probs=52.5
Q ss_pred CHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHHHhcCCCeEeecCCCCHHHH
Q 018508 95 SPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAA 172 (355)
Q Consensus 95 sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~aLdaGa~GImvP~Vesaeea 172 (355)
+.+.++.+..+|.|.|+|-..++. ..+...++++.++....|+++=+.. +..+ -.|+|++++|.+=+-++.
T Consensus 25 ~~~~l~~~~~~GtDaI~vGgs~gv-t~~~~~~~v~~ik~~~~Piil~p~~--~~~~----~~gaD~il~pslln~~~~ 95 (235)
T 3w01_A 25 SDDDLDAICMSQTDAIMIGGTDDV-TEDNVIHLMSKIRRYPLPLVLEISN--IESV----MPGFDFYFVPTVLNSTDV 95 (235)
T ss_dssp CHHHHHHHHTSSCSEEEECCSSCC-CHHHHHHHHHHHTTSCSCEEEECCC--STTC----CTTCSEEEEEEETTBSSG
T ss_pred CHHHHHHHHHcCCCEEEECCcCCc-CHHHHHHHHHHhcCcCCCEEEecCC--HHHh----hcCCCEEEEccccCCCCc
Confidence 556788889999999999998775 6788888888887766666664433 2222 459999999988554443
No 138
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=89.71 E-value=3.9 Score=39.87 Aligned_cols=65 Identities=15% Similarity=0.115 Sum_probs=45.2
Q ss_pred HHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHh-C-CCCeEEcCCCCCHHHHHHHHhcCCCeEee
Q 018508 96 PTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAA-T-GTPAILRLPESCPTWAKKALDLGPQGVMF 163 (355)
Q Consensus 96 p~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~-~-g~~~iVRV~~~~~~~i~~aLdaGa~GImv 163 (355)
.+.++.+...|+|+|.|+.-|+. .+...+.+..++. . +.+++|- +..+...++++.++|+++|.+
T Consensus 155 ~~~a~~~~~~G~d~i~i~~~~g~--~~~~~e~i~~ir~~~~~~pviv~-~v~~~~~a~~a~~~Gad~I~v 221 (404)
T 1eep_A 155 IERVEELVKAHVDILVIDSAHGH--STRIIELIKKIKTKYPNLDLIAG-NIVTKEAALDLISVGADCLKV 221 (404)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCS--SHHHHHHHHHHHHHCTTCEEEEE-EECSHHHHHHHHTTTCSEEEE
T ss_pred HHHHHHHHHCCCCEEEEeCCCCC--hHHHHHHHHHHHHHCCCCeEEEc-CCCcHHHHHHHHhcCCCEEEE
Confidence 34566677789999999877652 2445566665543 3 6677762 223467788999999999999
No 139
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=89.70 E-value=1.2 Score=39.69 Aligned_cols=183 Identities=9% Similarity=0.002 Sum_probs=94.7
Q ss_pred cEEEEEEecCCHHHH-HHhh--hcCCcEEEEeCCCCCCCHHHHHHHHHHHHhC--CCCe--EEcCCCCCHHHHHHHHhcC
Q 018508 85 TLYGLFLLSFSPTLA-EISG--LAGYDFVVVDMEHGPGGISDALACLHALAAT--GTPA--ILRLPESCPTWAKKALDLG 157 (355)
Q Consensus 85 ~~~gl~v~~~sp~~~-e~aa--~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~--g~~~--iVRV~~~~~~~i~~aLdaG 157 (355)
+.+-+-+-.++.+.. +.+. ..|.|++=+.++ .....-...+++++.. +.+. -+.+.+.....+..+.++|
T Consensus 7 ~~lilalD~~~~~~~~~~~~~~~~~vd~ie~g~~---~~~~~G~~~i~~lr~~~~~~~i~ld~~l~d~p~~~~~~~~~aG 83 (218)
T 3jr2_A 7 PMIQIALDQTNLTDAVAVASNVASYVDVIEVGTI---LAFAEGMKAVSTLRHNHPNHILVCDMKTTDGGAILSRMAFEAG 83 (218)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHGGGCSEEEECHH---HHHHHTTHHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHHT
T ss_pred CCeEEEeCCCCHHHHHHHHHHhcCCceEEEeCcH---HHHhcCHHHHHHHHHhCCCCcEEEEEeecccHHHHHHHHHhcC
Confidence 334444445555422 2222 346776644432 1122223455555432 3333 2333332234578899999
Q ss_pred CCeEeecCCCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEE-EEEEccHHHHHHHHHHhccCC
Q 018508 158 PQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLI-MCQVESEEGVKRAEDIAAVDG 236 (355)
Q Consensus 158 a~GImvP~Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~v-i~mIET~~av~nieeIaavpg 236 (355)
+++|.+|-....+.++++++.++.. | -...+ ++-+-|++ .+.++... |
T Consensus 84 ad~i~vh~~~~~~~~~~~~~~~~~~--g-------------------------~~~~~d~l~~~T~~---~~~~~~~~-g 132 (218)
T 3jr2_A 84 ADWITVSAAAHIATIAACKKVADEL--N-------------------------GEIQIEIYGNWTMQ---DAKAWVDL-G 132 (218)
T ss_dssp CSEEEEETTSCHHHHHHHHHHHHHH--T-------------------------CEEEEECCSSCCHH---HHHHHHHT-T
T ss_pred CCEEEEecCCCHHHHHHHHHHHHHh--C-------------------------CccceeeeecCCHH---HHHHHHHc-C
Confidence 9999999877766677888777521 1 01111 22235764 44444433 7
Q ss_pred ccEEEEChhhHHhhcCCCCCCCCHHHHHHHHHHHHHHHhCCCceeecccCCchhHHHHHHCCCCEEEecchH
Q 018508 237 VDCVQMGPLDLSASMGYLWDPGHRKVREMMRVAEKGVLGGGKAYLAGFAMPHDAPLEMKSRGYHMVSGAVDV 308 (355)
Q Consensus 237 VD~l~iGp~DLs~slG~~~~~~~p~v~~ai~~iv~aa~a~g~~~~g~~~~d~~~a~~~~~~G~~~vs~~~D~ 308 (355)
+|.+.+.+.-....-| +...+...+.++++. ....+.+.+..-+++.++.+++.|.+.+++|+-+
T Consensus 133 ~d~v~~~~~~~~~~~g---~~~~~~~l~~i~~~~----~~~~pi~v~GGI~~~~~~~~~~aGAd~vvvGsaI 197 (218)
T 3jr2_A 133 ITQAIYHRSRDAELAG---IGWTTDDLDKMRQLS----ALGIELSITGGIVPEDIYLFEGIKTKTFIAGRAL 197 (218)
T ss_dssp CCEEEEECCHHHHHHT---CCSCHHHHHHHHHHH----HTTCEEEEESSCCGGGGGGGTTSCEEEEEESGGG
T ss_pred ccceeeeeccccccCC---CcCCHHHHHHHHHHh----CCCCCEEEECCCCHHHHHHHHHcCCCEEEEchhh
Confidence 8876554322222223 222344444443332 2344332222335788888999999999999754
No 140
>1i3c_A Response regulator RCP1; phytochrome, signaling protein; 1.90A {Synechocystis SP} SCOP: c.23.1.1 PDB: 1jlk_A
Probab=89.65 E-value=6.7 Score=31.28 Aligned_cols=104 Identities=8% Similarity=-0.001 Sum_probs=61.5
Q ss_pred hHHHHHHHcCCcEEEEEEecCCH-HHHHHhhh-------cCCcEEEEeCCCCCCCHHHHHHHHHHHHh-CCCCeEEcCCC
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSP-TLAEISGL-------AGYDFVVVDMEHGPGGISDALACLHALAA-TGTPAILRLPE 144 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp-~~~e~aa~-------~G~D~vilDlEh~~~~~~~a~~~i~a~~~-~g~~~iVRV~~ 144 (355)
..++..|+.....+-+. ...+. +..+.+.. ..+|.|++|++-...+--++...++.... ...++++=...
T Consensus 22 ~~l~~~L~~~~~~~~v~-~~~~~~~al~~l~~~~~~~~~~~~dlillD~~lp~~~g~~l~~~l~~~~~~~~~piiils~~ 100 (149)
T 1i3c_A 22 RLVQEVLKTSTIDHELI-ILRDGLAAMAFLQQQGEYENSPRPNLILLDLNLPKKDGREVLAEIKQNPDLKRIPVVVLTTS 100 (149)
T ss_dssp HHHHHHHHSCCSCEEEE-EECSHHHHHHHHTTCGGGTTCCCCSEEEECSCCSSSCHHHHHHHHHHCTTTTTSCEEEEESC
T ss_pred HHHHHHHHhcCCCccEE-EeCCHHHHHHHHHhccccccCCCCCEEEEeCCCCCCcHHHHHHHHHhCcCcCCCeEEEEECC
Confidence 45667776533211122 23343 44455543 36899999998765443344334443211 23455555555
Q ss_pred CCHHHHHHHHhcCCCeEeecCCCCHHHHHHHHHHc
Q 018508 145 SCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYC 179 (355)
Q Consensus 145 ~~~~~i~~aLdaGa~GImvP~Vesaeea~~vv~a~ 179 (355)
.+...+.++++.|+++.+ +|=-+.+++...++.+
T Consensus 101 ~~~~~~~~~~~~ga~~~l-~KP~~~~~L~~~i~~~ 134 (149)
T 1i3c_A 101 HNEDDVIASYELHVNCYL-TKSRNLKDLFKMVQGI 134 (149)
T ss_dssp CCHHHHHHHHHTTCSEEE-ECCSSHHHHHHHHHHH
T ss_pred CChHHHHHHHHcCCcEEE-ECCCCHHHHHHHHHHH
Confidence 667778899999999864 5555788887776654
No 141
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=89.50 E-value=2.4 Score=39.55 Aligned_cols=77 Identities=14% Similarity=0.109 Sum_probs=52.6
Q ss_pred CCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHHHhcCCCeEe
Q 018508 83 NETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVM 162 (355)
Q Consensus 83 G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~aLdaGa~GIm 162 (355)
+-|++. .-.+-++..++.+...|+|.|+|=... .+.+++++++..+...|..++|=+. +...+.++++.|++.|-
T Consensus 113 ~lPvl~-kdfiid~~qv~~A~~~GAD~VlLi~a~--l~~~~l~~l~~~a~~lGl~~lvev~--t~ee~~~A~~~Gad~IG 187 (272)
T 3qja_A 113 SIPVLR-KDFVVQPYQIHEARAHGADMLLLIVAA--LEQSVLVSMLDRTESLGMTALVEVH--TEQEADRALKAGAKVIG 187 (272)
T ss_dssp SSCEEE-ESCCCSHHHHHHHHHTTCSEEEEEGGG--SCHHHHHHHHHHHHHTTCEEEEEES--SHHHHHHHHHHTCSEEE
T ss_pred CCCEEE-CccccCHHHHHHHHHcCCCEEEEeccc--CCHHHHHHHHHHHHHCCCcEEEEcC--CHHHHHHHHHCCCCEEE
Confidence 445552 223457777888889999999882221 1246677777777777888887654 45678888889998776
Q ss_pred ec
Q 018508 163 FP 164 (355)
Q Consensus 163 vP 164 (355)
+-
T Consensus 188 v~ 189 (272)
T 3qja_A 188 VN 189 (272)
T ss_dssp EE
T ss_pred EC
Confidence 64
No 142
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=89.47 E-value=10 Score=33.04 Aligned_cols=152 Identities=15% Similarity=0.123 Sum_probs=83.1
Q ss_pred HHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCC-CCHHHHHHHHhcCCCeEeecCCCCHHHHHHHH
Q 018508 98 LAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPE-SCPTWAKKALDLGPQGVMFPMIDSPEAAKEAV 176 (355)
Q Consensus 98 ~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~-~~~~~i~~aLdaGa~GImvP~Vesaeea~~vv 176 (355)
.++.+...|+|+|-++..+. ...+..+.+.+ ..+.+.+|-... .+...+..++++|+++|.+|.. ..+ ++
T Consensus 24 ~~~~~~~~G~~~i~l~~~~~-~~~~~i~~i~~---~~~~~l~vg~g~~~~~~~i~~a~~~Gad~V~~~~~-~~~----~~ 94 (212)
T 2v82_A 24 HVGAVIDAGFDAVEIPLNSP-QWEQSIPAIVD---AYGDKALIGAGTVLKPEQVDALARMGCQLIVTPNI-HSE----VI 94 (212)
T ss_dssp HHHHHHHHTCCEEEEETTST-THHHHHHHHHH---HHTTTSEEEEECCCSHHHHHHHHHTTCCEEECSSC-CHH----HH
T ss_pred HHHHHHHCCCCEEEEeCCCh-hHHHHHHHHHH---hCCCCeEEEeccccCHHHHHHHHHcCCCEEEeCCC-CHH----HH
Confidence 45666778999999987763 22222222222 235556662111 1356789999999999998863 222 23
Q ss_pred HHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEEccHHHHHHHHHHhccCCccEEEEChhhHHhhcCCCCC
Q 018508 177 SYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKRAEDIAAVDGVDCVQMGPLDLSASMGYLWD 256 (355)
Q Consensus 177 ~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mIET~~av~nieeIaavpgVD~l~iGp~DLs~slG~~~~ 256 (355)
+.++.. | ..+++-+.|++-+.... ..|+|.|.+-+.+ .+|
T Consensus 95 ~~~~~~--g---------------------------~~~~~g~~t~~e~~~a~----~~G~d~v~v~~t~---~~g---- 134 (212)
T 2v82_A 95 RRAVGY--G---------------------------MTVCPGCATATEAFTAL----EAGAQALKIFPSS---AFG---- 134 (212)
T ss_dssp HHHHHT--T---------------------------CEEECEECSHHHHHHHH----HTTCSEEEETTHH---HHC----
T ss_pred HHHHHc--C---------------------------CCEEeecCCHHHHHHHH----HCCCCEEEEecCC---CCC----
Confidence 333210 1 11222267776543332 2478998874432 111
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCc--eeecccCCchhHHHHHHCCCCEEEecch
Q 018508 257 PGHRKVREMMRVAEKGVLGGGKA--YLAGFAMPHDAPLEMKSRGYHMVSGAVD 307 (355)
Q Consensus 257 ~~~p~v~~ai~~iv~aa~a~g~~--~~g~~~~d~~~a~~~~~~G~~~vs~~~D 307 (355)
+ +.+.++..... .+.+ ..||+ +++.+..+++.|++.+.+|+-
T Consensus 135 ---~---~~~~~l~~~~~-~~ipvia~GGI--~~~~i~~~~~~Ga~gv~vGsa 178 (212)
T 2v82_A 135 ---P---QYIKALKAVLP-SDIAVFAVGGV--TPENLAQWIDAGCAGAGLGSD 178 (212)
T ss_dssp ---H---HHHHHHHTTSC-TTCEEEEESSC--CTTTHHHHHHHTCSEEEECTT
T ss_pred ---H---HHHHHHHHhcc-CCCeEEEeCCC--CHHHHHHHHHcCCCEEEEChH
Confidence 1 22233222211 1233 24555 368888899999999998853
No 143
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=89.26 E-value=5.6 Score=31.82 Aligned_cols=101 Identities=12% Similarity=-0.029 Sum_probs=62.1
Q ss_pred hHHHHHHHcCCcEEEEEEecCCH-HHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSP-TLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKK 152 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp-~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~ 152 (355)
..+++.|..-...+ . ...+. +..+.+....+|.|++|++-...+--++...++.. ....++++=....+......
T Consensus 17 ~~l~~~L~~~g~~v--~-~~~~~~~a~~~l~~~~~dliild~~l~~~~g~~~~~~l~~~-~~~~pii~ls~~~~~~~~~~ 92 (155)
T 1qkk_A 17 KAMQQTLELAGFTV--S-SFASATEALAGLSADFAGIVISDIRMPGMDGLALFRKILAL-DPDLPMILVTGHGDIPMAVQ 92 (155)
T ss_dssp HHHHHHHHHTTCEE--E-EESCHHHHHHTCCTTCCSEEEEESCCSSSCHHHHHHHHHHH-CTTSCEEEEECGGGHHHHHH
T ss_pred HHHHHHHHHcCcEE--E-EECCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhh-CCCCCEEEEECCCChHHHHH
Confidence 45667776433322 2 23344 45566666779999999987654444444444432 23445555455555667888
Q ss_pred HHhcCCCeEeecCCCCHHHHHHHHHHc
Q 018508 153 ALDLGPQGVMFPMIDSPEAAKEAVSYC 179 (355)
Q Consensus 153 aLdaGa~GImvP~Vesaeea~~vv~a~ 179 (355)
++..|+++++ ++--+.+++...++.+
T Consensus 93 ~~~~g~~~~l-~kP~~~~~L~~~i~~~ 118 (155)
T 1qkk_A 93 AIQDGAYDFI-AKPFAADRLVQSARRA 118 (155)
T ss_dssp HHHTTCCEEE-ESSCCHHHHHHHHHHH
T ss_pred HHhcCCCeEE-eCCCCHHHHHHHHHHH
Confidence 9999999875 4555788887766654
No 144
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=89.25 E-value=4.6 Score=38.45 Aligned_cols=83 Identities=16% Similarity=0.147 Sum_probs=53.3
Q ss_pred CCcEEEEEEecCCHHHH-HHhhhcCCcEEEEeCCCCCC-----CHH---HHHHHHHHHH-hCCCCeEEcC--CCCCHHHH
Q 018508 83 NETLYGLFLLSFSPTLA-EISGLAGYDFVVVDMEHGPG-----GIS---DALACLHALA-ATGTPAILRL--PESCPTWA 150 (355)
Q Consensus 83 G~~~~gl~v~~~sp~~~-e~aa~~G~D~vilDlEh~~~-----~~~---~a~~~i~a~~-~~g~~~iVRV--~~~~~~~i 150 (355)
+.|+++-.....++..+ +.+...|+|+|-|++.+... ... .+.+.++.++ ..+.+++|+. +..+...+
T Consensus 116 ~~pv~~~i~~~~~~~~~~~~~~~~gad~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~vr~~~~~Pv~vK~~~~~~~~~~a 195 (349)
T 1p0k_A 116 NGLIFANLGSEATAAQAKEAVEMIGANALQIHLNVIQEIVMPEGDRSFSGALKRIEQICSRVSVPVIVKEVGFGMSKASA 195 (349)
T ss_dssp SSCEEEEEETTCCHHHHHHHHHHTTCSEEEEEECTTTTC--------CTTHHHHHHHHHHHCSSCEEEEEESSCCCHHHH
T ss_pred CceeEEeecCCCCHHHHHHHHHhcCCCeEEecccchhhhcCCCCCcchHHHHHHHHHHHHHcCCCEEEEecCCCCCHHHH
Confidence 44655554423455544 44556899999999876320 111 1345555554 4578888874 33567889
Q ss_pred HHHHhcCCCeEeecC
Q 018508 151 KKALDLGPQGVMFPM 165 (355)
Q Consensus 151 ~~aLdaGa~GImvP~ 165 (355)
+.+.++|+++|+++.
T Consensus 196 ~~a~~~Gad~I~v~~ 210 (349)
T 1p0k_A 196 GKLYEAGAAAVDIGG 210 (349)
T ss_dssp HHHHHHTCSEEEEEC
T ss_pred HHHHHcCCCEEEEcC
Confidence 999999999999983
No 145
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=88.84 E-value=15 Score=34.26 Aligned_cols=86 Identities=17% Similarity=0.166 Sum_probs=59.1
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEe-C----CCC-----CCCHHHHHHHHHHH-HhCCCCeEEcC
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVD-M----EHG-----PGGISDALACLHAL-AATGTPAILRL 142 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilD-l----Eh~-----~~~~~~a~~~i~a~-~~~g~~~iVRV 142 (355)
..||++++. + -...+.-+...+..+..+|||.|++= . -++ +.+.++....++.+ +....+++|=.
T Consensus 8 ~~lr~l~~~-~---i~~~~a~D~~sA~~~~~aG~~ai~vsg~s~a~~~G~pD~~~vt~~em~~~~~~I~~~~~~pviaD~ 83 (275)
T 2ze3_A 8 RSFHALHQT-G---FLLPNAWDVASARLLEAAGFTAIGTTSAGIAHARGRTDGQTLTRDEMGREVEAIVRAVAIPVNADI 83 (275)
T ss_dssp HHHHHHHHH-C---EEECEESSHHHHHHHHHHTCSCEEECHHHHHHHSCCCSSSSSCHHHHHHHHHHHHHHCSSCEEEEC
T ss_pred HHHHHHhhC-C---eeEecccCHHHHHHHHHcCCCEEEECcHHHHHhCCCCCCCCCCHHHHHHHHHHHHhhcCCCEEeec
Confidence 468888875 3 23345678888888889999999986 1 223 35667776666654 34567777777
Q ss_pred CCC---CHH----HHHHHHhcCCCeEee
Q 018508 143 PES---CPT----WAKKALDLGPQGVMF 163 (355)
Q Consensus 143 ~~~---~~~----~i~~aLdaGa~GImv 163 (355)
+.. ++. .++++.++|+.||.+
T Consensus 84 d~Gyg~~~~~~~~~v~~l~~aGaagv~i 111 (275)
T 2ze3_A 84 EAGYGHAPEDVRRTVEHFAALGVAGVNL 111 (275)
T ss_dssp TTCSSSSHHHHHHHHHHHHHTTCSEEEE
T ss_pred CCCCCCCHHHHHHHHHHHHHcCCcEEEE
Confidence 665 332 357788999998876
No 146
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=88.74 E-value=6.4 Score=29.86 Aligned_cols=101 Identities=10% Similarity=0.022 Sum_probs=61.4
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKA 153 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~a 153 (355)
..+++.|......+ ..-.+..+..+.+....+|.|++|++-...+--+....++.. ...++++=....+.....++
T Consensus 17 ~~l~~~l~~~~~~v--~~~~~~~~a~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~--~~~~ii~~s~~~~~~~~~~~ 92 (123)
T 1xhf_A 17 NTLKSIFEAEGYDV--FEATDGAEMHQILSEYDINLVIMDINLPGKNGLLLARELREQ--ANVALMFLTGRDNEVDKILG 92 (123)
T ss_dssp HHHHHHHHTTTCEE--EEESSHHHHHHHHHHSCCSEEEECSSCSSSCHHHHHHHHHHH--CCCEEEEEESCCSHHHHHHH
T ss_pred HHHHHHHhhCCcEE--EEeCCHHHHHHHHhcCCCCEEEEcCCCCCCCHHHHHHHHHhC--CCCcEEEEECCCChHHHHHH
Confidence 45677776533332 222233445566677789999999987554433443444432 34444444444556677889
Q ss_pred HhcCCCeEeecCCCCHHHHHHHHHHc
Q 018508 154 LDLGPQGVMFPMIDSPEAAKEAVSYC 179 (355)
Q Consensus 154 LdaGa~GImvP~Vesaeea~~vv~a~ 179 (355)
++.|+++++ +|--+.+++...++.+
T Consensus 93 ~~~g~~~~l-~KP~~~~~l~~~i~~~ 117 (123)
T 1xhf_A 93 LEIGADDYI-TKPFNPRELTIRARNL 117 (123)
T ss_dssp HHHTCSEEE-ESSCCHHHHHHHHHHH
T ss_pred HhcCcceEE-eCCCCHHHHHHHHHHH
Confidence 999999865 4555788887766543
No 147
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=88.68 E-value=10 Score=35.86 Aligned_cols=177 Identities=12% Similarity=0.032 Sum_probs=101.0
Q ss_pred EEEecCCHHHHHHhhhcCCcEEEEeCCCCC----CCHHHHHHHHHHHHhCCCCeEEcCCCCCH-----------HHHHHH
Q 018508 89 LFLLSFSPTLAEISGLAGYDFVVVDMEHGP----GGISDALACLHALAATGTPAILRLPESCP-----------TWAKKA 153 (355)
Q Consensus 89 l~v~~~sp~~~e~aa~~G~D~vilDlEh~~----~~~~~a~~~i~a~~~~g~~~iVRV~~~~~-----------~~i~~a 153 (355)
+=+-..+.+.+..+...|+|.|=|+-.+.. .+........... .-+..++||..+.+. ..|..+
T Consensus 42 lEvc~~s~~~a~~A~~gGAdRIELc~~l~~GGlTPS~g~i~~a~~~~-~ipV~vMIRPRgGdF~Ys~~E~~~M~~dI~~~ 120 (287)
T 3iwp_A 42 MEVCVDSVESAVNAERGGADRIELCSGLSEGGTTPSMGVLQVVKQSV-QIPVFVMIRPRGGDFLYSDREIEVMKADIRLA 120 (287)
T ss_dssp EEEEESSHHHHHHHHHHTCSEEEECBCGGGTCBCCCHHHHHHHHTTC-CSCEEEECCSSSSCSCCCHHHHHHHHHHHHHH
T ss_pred EEEEeCCHHHHHHHHHhCCCEEEECCCCCCCCCCCCHHHHHHHHHhc-CCCeEEEEecCCCCcccCHHHHHHHHHHHHHH
Confidence 445578999999999999999999955431 2333332222111 123456889776531 246778
Q ss_pred HhcCCCeEeecCC-----CCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEEccHHHHHHH
Q 018508 154 LDLGPQGVMFPMI-----DSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKRA 228 (355)
Q Consensus 154 LdaGa~GImvP~V-----esaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mIET~~av~ni 228 (355)
.++|++||++=.. -+.+..+++++.++- .+..+.|+... ++.-.+.+
T Consensus 121 ~~~GAdGvVfG~L~~dg~iD~~~~~~Li~~a~~-------l~vTFHRAFD~---------------------~~d~~~Al 172 (287)
T 3iwp_A 121 KLYGADGLVFGALTEDGHIDKELCMSLMAICRP-------LPVTFHRAFDM---------------------VHDPMAAL 172 (287)
T ss_dssp HHTTCSEEEECCBCTTSCBCHHHHHHHHHHHTT-------SCEEECGGGGG---------------------CSCHHHHH
T ss_pred HHcCCCEEEEeeeCCCCCcCHHHHHHHHHHcCC-------CcEEEECchhc---------------------cCCHHHHH
Confidence 8999999998631 245677888887652 22333443211 11134566
Q ss_pred HHHhccCCccEEEEChhhHHhhcCCCCCCCCHHHHHHHHHHHHHHHhCCCceeecccCCchhHHHHHH-CCCCEEEecc
Q 018508 229 EDIAAVDGVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVAEKGVLGGGKAYLAGFAMPHDAPLEMKS-RGYHMVSGAV 306 (355)
Q Consensus 229 eeIaavpgVD~l~iGp~DLs~slG~~~~~~~p~v~~ai~~iv~aa~a~g~~~~g~~~~d~~~a~~~~~-~G~~~vs~~~ 306 (355)
+.++.. |+|.|+-+-. .+.. ++=...++++++.+. ..+.+..+=..+++.++.+++ .|++.+-.+.
T Consensus 173 e~Li~l-GvdrILTSG~-------~~~a---~~Gl~~Lk~Lv~~a~-~rI~ImaGGGV~~~Ni~~l~~~tG~~~~H~S~ 239 (287)
T 3iwp_A 173 ETLLTL-GFERVLTSGC-------DSSA---LEGLPLIKRLIEQAK-GRIVVMPGGGITDRNLQRILEGSGATEFHCSA 239 (287)
T ss_dssp HHHHHH-TCSEEEECTT-------SSST---TTTHHHHHHHHHHHT-TSSEEEECTTCCTTTHHHHHHHHCCSEEEECC
T ss_pred HHHHHc-CCCEEECCCC-------CCCh---HHhHHHHHHHHHHhC-CCCEEEECCCcCHHHHHHHHHhhCCCEEeECc
Confidence 677766 8999888432 1111 122334455554442 123333222335566666655 8998876553
No 148
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=88.68 E-value=2.4 Score=38.41 Aligned_cols=122 Identities=16% Similarity=0.009 Sum_probs=72.0
Q ss_pred HHHhCCCCeEEcCCCCCH--HHHHHHHhcCCCeEeecCCCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccc
Q 018508 130 ALAATGTPAILRLPESCP--TWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLS 207 (355)
Q Consensus 130 a~~~~g~~~iVRV~~~~~--~~i~~aLdaGa~GImvP~Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~ 207 (355)
.+...+..+++|..+.+. ..++++++.|++.|-+..- +....+.+.+..+..|
T Consensus 13 ~l~~~~ii~vir~~~~~~~~~~~~al~~gGv~~iel~~k-~~~~~~~i~~l~~~~~------------------------ 67 (224)
T 1vhc_A 13 KLRELKIVPVIALDNADDILPLADTLAKNGLSVAEITFR-SEAAADAIRLLRANRP------------------------ 67 (224)
T ss_dssp HHHHHCEEEEECCSSGGGHHHHHHHHHHTTCCEEEEETT-STTHHHHHHHHHHHCT------------------------
T ss_pred HHHHCCeEEEEeCCCHHHHHHHHHHHHHcCCCEEEEecc-CchHHHHHHHHHHhCc------------------------
Confidence 344568889999987664 3578899999999999864 3333332222322111
Q ss_pred cCCCceEEEE--EEccHHHHHHHHHHhccCCccEEEEChhhHHhhcCCCCCCCCHHHHHHHHHHHHHHHhCCCceeeccc
Q 018508 208 NYEEELLIMC--QVESEEGVKRAEDIAAVDGVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVAEKGVLGGGKAYLAGFA 285 (355)
Q Consensus 208 ~~n~~i~vi~--mIET~~av~nieeIaavpgVD~l~iGp~DLs~slG~~~~~~~p~v~~ai~~iv~aa~a~g~~~~g~~~ 285 (355)
+..+.+ .+ +. +.++.-.+. |.|++..|..| ..+++.|++.|...+-+ +
T Consensus 68 ----~l~vgaGtvl-~~---d~~~~A~~a-GAd~v~~p~~d--------------------~~v~~~ar~~g~~~i~G-v 117 (224)
T 1vhc_A 68 ----DFLIAAGTVL-TA---EQVVLAKSS-GADFVVTPGLN--------------------PKIVKLCQDLNFPITPG-V 117 (224)
T ss_dssp ----TCEEEEESCC-SH---HHHHHHHHH-TCSEEECSSCC--------------------HHHHHHHHHTTCCEECE-E
T ss_pred ----CcEEeeCcEe-eH---HHHHHHHHC-CCCEEEECCCC--------------------HHHHHHHHHhCCCEEec-c
Confidence 111111 11 33 333332222 67898766543 22445777777764444 5
Q ss_pred CCchhHHHHHHCCCCEEEecc
Q 018508 286 MPHDAPLEMKSRGYHMVSGAV 306 (355)
Q Consensus 286 ~d~~~a~~~~~~G~~~vs~~~ 306 (355)
.+++++....+.|++.+-+-+
T Consensus 118 ~t~~e~~~A~~~Gad~vk~Fp 138 (224)
T 1vhc_A 118 NNPMAIEIALEMGISAVKFFP 138 (224)
T ss_dssp CSHHHHHHHHHTTCCEEEETT
T ss_pred CCHHHHHHHHHCCCCEEEEee
Confidence 568888888899999886644
No 149
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=88.61 E-value=5.6 Score=36.73 Aligned_cols=81 Identities=16% Similarity=0.037 Sum_probs=52.1
Q ss_pred CcEEEEEEecCCHHHH----HHhhh-cCCcEEEEeCCCC---------CCCHHHHHHHHHHHHh-CCCCeEEcCCC-C-C
Q 018508 84 ETLYGLFLLSFSPTLA----EISGL-AGYDFVVVDMEHG---------PGGISDALACLHALAA-TGTPAILRLPE-S-C 146 (355)
Q Consensus 84 ~~~~gl~v~~~sp~~~----e~aa~-~G~D~vilDlEh~---------~~~~~~a~~~i~a~~~-~g~~~iVRV~~-~-~ 146 (355)
+..++.-+..++++.. +.+.. .|+|+|-|.+-.- ..+.+.+.+.+++++. .+.+++||+.. . +
T Consensus 98 ~~p~~v~l~~~~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~~~~pv~vk~~~~~~~ 177 (311)
T 1ep3_A 98 ELPIIANVAGSEEADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAVSKVPLYVKLSPNVTD 177 (311)
T ss_dssp TSCEEEEECCSSHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHHCSSCEEEEECSCSSC
T ss_pred CCcEEEEEcCCCHHHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHhcCCCEEEEECCChHH
Confidence 4445555555566533 33344 8999999987421 1244556677777654 37889999863 2 3
Q ss_pred -HHHHHHHHhcCCCeEeec
Q 018508 147 -PTWAKKALDLGPQGVMFP 164 (355)
Q Consensus 147 -~~~i~~aLdaGa~GImvP 164 (355)
...++.+.++|+++|.+.
T Consensus 178 ~~~~a~~l~~~G~d~i~v~ 196 (311)
T 1ep3_A 178 IVPIAKAVEAAGADGLTMI 196 (311)
T ss_dssp SHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHHcCCCEEEEe
Confidence 334678889999999994
No 150
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=88.59 E-value=0.96 Score=40.48 Aligned_cols=84 Identities=14% Similarity=0.000 Sum_probs=50.7
Q ss_pred CH-HHHHHhhhcCCcEEEEeCCCCCCC-HHHHHHHHHHHH-hCCCCeEEcCCCCCHHHHHHHHhcCCCeEeecC--CCCH
Q 018508 95 SP-TLAEISGLAGYDFVVVDMEHGPGG-ISDALACLHALA-ATGTPAILRLPESCPTWAKKALDLGPQGVMFPM--IDSP 169 (355)
Q Consensus 95 sp-~~~e~aa~~G~D~vilDlEh~~~~-~~~a~~~i~a~~-~~g~~~iVRV~~~~~~~i~~aLdaGa~GImvP~--Vesa 169 (355)
+| +.++.+...|+|++-++-.++.+. .... ..++.+. ..+.+++|=-.-.++..+..++++|+++|++-. ..++
T Consensus 32 d~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~-~~i~~i~~~~~ipv~v~ggi~~~~~~~~~l~~Gad~V~lg~~~l~~p 110 (244)
T 2y88_A 32 SAVDAALGWQRDGAEWIHLVDLDAAFGRGSNH-ELLAEVVGKLDVQVELSGGIRDDESLAAALATGCARVNVGTAALENP 110 (244)
T ss_dssp EHHHHHHHHHHTTCSEEEEEEHHHHTTSCCCH-HHHHHHHHHCSSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHHCH
T ss_pred CHHHHHHHHHHcCCCEEEEEcCcccccCCChH-HHHHHHHHhcCCcEEEECCCCCHHHHHHHHHcCCCEEEECchHhhCh
Confidence 44 466778889999999876443110 0111 3444432 345555553222357789999999999998743 2455
Q ss_pred HHHHHHHHHc
Q 018508 170 EAAKEAVSYC 179 (355)
Q Consensus 170 eea~~vv~a~ 179 (355)
+.+.++++.+
T Consensus 111 ~~~~~~~~~~ 120 (244)
T 2y88_A 111 QWCARVIGEH 120 (244)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHc
Confidence 5566666543
No 151
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=88.58 E-value=4.5 Score=32.33 Aligned_cols=103 Identities=11% Similarity=0.060 Sum_probs=61.7
Q ss_pred hHHHHHHHcCCc--EEEEEEecCCHHHHHHh---------hhcCCcEEEEeCCCCCCCHHHHHHHHHHHH-hCCCCeEEc
Q 018508 74 ESLKYRLQSNET--LYGLFLLSFSPTLAEIS---------GLAGYDFVVVDMEHGPGGISDALACLHALA-ATGTPAILR 141 (355)
Q Consensus 74 n~lk~~L~~G~~--~~gl~v~~~sp~~~e~a---------a~~G~D~vilDlEh~~~~~~~a~~~i~a~~-~~g~~~iVR 141 (355)
..+++.|+.-.. .+..+ .+..+..+.+ ....+|.|++|++-...+--++...++... ....+++|=
T Consensus 18 ~~l~~~L~~~g~~~~v~~~--~~~~~al~~l~~~~~~~~~~~~~~dliilD~~l~~~~g~~~~~~lr~~~~~~~~pii~~ 95 (152)
T 3heb_A 18 RLIEKNIRRAGVNNEIIAF--TDGTSALNYLFGDDKSGRVSAGRAQLVLLDLNLPDMTGIDILKLVKENPHTRRSPVVIL 95 (152)
T ss_dssp HHHHHHHHHTTCCCCEEEE--SSHHHHHHHHHCTTSSSGGGTTCBEEEEECSBCSSSBHHHHHHHHHHSTTTTTSCEEEE
T ss_pred HHHHHHHHhCCCcceEEEe--CCHHHHHHHHhccccccccccCCCCEEEEeCCCCCCcHHHHHHHHHhcccccCCCEEEE
Confidence 456666765433 22222 2333444555 256799999999865444333333343321 234455665
Q ss_pred CCCCCHHHHHHHHhcCCCeEeecCCCCHHHHHHHHHHc
Q 018508 142 LPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYC 179 (355)
Q Consensus 142 V~~~~~~~i~~aLdaGa~GImvP~Vesaeea~~vv~a~ 179 (355)
....+...+.++++.|+++++ +|=-+.+++...++.+
T Consensus 96 t~~~~~~~~~~~~~~g~~~~l-~KP~~~~~l~~~i~~~ 132 (152)
T 3heb_A 96 TTTDDQREIQRCYDLGANVYI-TKPVNYENFANAIRQL 132 (152)
T ss_dssp ESCCCHHHHHHHHHTTCSEEE-ECCSSHHHHHHHHHHH
T ss_pred ecCCCHHHHHHHHHCCCcEEE-eCCCCHHHHHHHHHHH
Confidence 566667778899999999865 4555788887766654
No 152
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=88.54 E-value=2.1 Score=39.25 Aligned_cols=126 Identities=12% Similarity=0.009 Sum_probs=74.4
Q ss_pred HHHHHHhCCCCeEEcCCCCCH--HHHHHHHhcCCCeEeecCCCCHHHHHHHHHHcC-CCCCCCCCCcccccccccCCCCc
Q 018508 127 CLHALAATGTPAILRLPESCP--TWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCR-FPPSGVRGSAHTVVRASGYGIDE 203 (355)
Q Consensus 127 ~i~a~~~~g~~~iVRV~~~~~--~~i~~aLdaGa~GImvP~Vesaeea~~vv~a~~-~pP~G~Rg~g~~~~ra~~~g~~~ 203 (355)
.+..+...+.-++||..+.+. ..++++++.|+..|-+++- |+...+.+.+..+ || .
T Consensus 27 ~~~~l~~~~vv~Vir~~~~~~a~~~a~al~~gGi~~iEvt~~-t~~a~e~I~~l~~~~~-~------------------- 85 (232)
T 4e38_A 27 INNQLKALKVIPVIAIDNAEDIIPLGKVLAENGLPAAEITFR-SDAAVEAIRLLRQAQP-E------------------- 85 (232)
T ss_dssp HHHHHHHHCEEEEECCSSGGGHHHHHHHHHHTTCCEEEEETT-STTHHHHHHHHHHHCT-T-------------------
T ss_pred HHHHHHhCCEEEEEEcCCHHHHHHHHHHHHHCCCCEEEEeCC-CCCHHHHHHHHHHhCC-C-------------------
Confidence 344455678899999998764 3467889999999999874 4443322222211 22 1
Q ss_pred cccccCCCceEEEEEEccHHHHHHHHHHhccCCccEEEEChhhHHhhcCCCCCCCCHHHHHHHHHHHHHHHhCCCceeec
Q 018508 204 GYLSNYEEELLIMCQVESEEGVKRAEDIAAVDGVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVAEKGVLGGGKAYLAG 283 (355)
Q Consensus 204 ~y~~~~n~~i~vi~mIET~~av~nieeIaavpgVD~l~iGp~DLs~slG~~~~~~~p~v~~ai~~iv~aa~a~g~~~~g~ 283 (355)
..+.+- |.--.+.++...+. |.|++..+. . .+ .+++.|+++|+.++.+
T Consensus 86 ---------~~iGaG--TVlt~~~a~~Ai~A-GA~fIvsP~------------~-~~-------~vi~~~~~~gi~~ipG 133 (232)
T 4e38_A 86 ---------MLIGAG--TILNGEQALAAKEA-GATFVVSPG------------F-NP-------NTVRACQEIGIDIVPG 133 (232)
T ss_dssp ---------CEEEEE--CCCSHHHHHHHHHH-TCSEEECSS------------C-CH-------HHHHHHHHHTCEEECE
T ss_pred ---------CEEeEC--CcCCHHHHHHHHHc-CCCEEEeCC------------C-CH-------HHHHHHHHcCCCEEcC
Confidence 111111 11113344443332 788886321 1 22 3446677788876555
Q ss_pred ccCCchhHHHHHHCCCCEEEecc
Q 018508 284 FAMPHDAPLEMKSRGYHMVSGAV 306 (355)
Q Consensus 284 ~~~d~~~a~~~~~~G~~~vs~~~ 306 (355)
+ .++.++....+.|++.+-+-+
T Consensus 134 v-~TptEi~~A~~~Gad~vK~FP 155 (232)
T 4e38_A 134 V-NNPSTVEAALEMGLTTLKFFP 155 (232)
T ss_dssp E-CSHHHHHHHHHTTCCEEEECS
T ss_pred C-CCHHHHHHHHHcCCCEEEECc
Confidence 4 478888888999999875543
No 153
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=88.53 E-value=8 Score=30.71 Aligned_cols=104 Identities=14% Similarity=0.112 Sum_probs=64.7
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhC---CCCeEEcCCCCCHHHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAAT---GTPAILRLPESCPTWA 150 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~---g~~~iVRV~~~~~~~i 150 (355)
..+++.|..-...+. .-.+..+..+.+....+|.|++|++-...+--++...++..... ..++++=....+...+
T Consensus 28 ~~l~~~L~~~g~~v~--~~~~~~~al~~~~~~~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~~~~pii~~s~~~~~~~~ 105 (143)
T 3m6m_D 28 MVLQRLLEKAGHKVL--CVNGAEQVLDAMAEEDYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSADVTPEAI 105 (143)
T ss_dssp HHHHHHHHC--CEEE--EESSHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHHHHTTCCCCCEEEEESCCCHHHH
T ss_pred HHHHHHHHHcCCeEE--EeCCHHHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhchhccCCCCeEEEEeCCCCHHHH
Confidence 456666764332222 22233445667777889999999987655544555555543322 2444544455567778
Q ss_pred HHHHhcCCCeEeecCCCCHHHHHHHHHHcC
Q 018508 151 KKALDLGPQGVMFPMIDSPEAAKEAVSYCR 180 (355)
Q Consensus 151 ~~aLdaGa~GImvP~Vesaeea~~vv~a~~ 180 (355)
.+++++|+++.+ +|=-+.+++...++.+.
T Consensus 106 ~~~~~~Ga~~~l-~KP~~~~~L~~~l~~~~ 134 (143)
T 3m6m_D 106 RACEQAGARAFL-AKPVVAAKLLDTLADLA 134 (143)
T ss_dssp HHHHHTTCSEEE-ESSCCHHHHHHHHHHHC
T ss_pred HHHHHcChhhee-eCCCCHHHHHHHHHHHH
Confidence 899999999874 45567888887777654
No 154
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=88.22 E-value=6.9 Score=29.55 Aligned_cols=103 Identities=14% Similarity=0.003 Sum_probs=61.2
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKA 153 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~a 153 (355)
..+++.|......+ ...-.+..+..+.+....+|.|++|+.-...+--+....++.. ....++++=....+.....++
T Consensus 16 ~~l~~~l~~~g~~v-v~~~~~~~~a~~~~~~~~~dlil~D~~l~~~~g~~~~~~l~~~-~~~~~ii~~s~~~~~~~~~~~ 93 (120)
T 1tmy_A 16 MMLKDIITKAGYEV-AGEATNGREAVEKYKELKPDIVTMDITMPEMNGIDAIKEIMKI-DPNAKIIVCSAMGQQAMVIEA 93 (120)
T ss_dssp HHHHHHHHHTTCEE-EEEESSHHHHHHHHHHHCCSEEEEECSCGGGCHHHHHHHHHHH-CTTCCEEEEECTTCHHHHHHH
T ss_pred HHHHHHHhhcCcEE-EEEECCHHHHHHHHHhcCCCEEEEeCCCCCCcHHHHHHHHHhh-CCCCeEEEEeCCCCHHHHHHH
Confidence 34666676433221 1112233455666777789999999986543333333333332 233455554455567778889
Q ss_pred HhcCCCeEeecCCCCHHHHHHHHHHc
Q 018508 154 LDLGPQGVMFPMIDSPEAAKEAVSYC 179 (355)
Q Consensus 154 LdaGa~GImvP~Vesaeea~~vv~a~ 179 (355)
++.|+++++ +|--+.+++...++.+
T Consensus 94 ~~~g~~~~l-~KP~~~~~l~~~i~~~ 118 (120)
T 1tmy_A 94 IKAGAKDFI-VKPFQPSRVVEALNKV 118 (120)
T ss_dssp HHTTCCEEE-ESSCCHHHHHHHHHHH
T ss_pred HHhCcceeE-eCCCCHHHHHHHHHHH
Confidence 999999865 4556788887776643
No 155
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=88.20 E-value=9.8 Score=35.72 Aligned_cols=105 Identities=20% Similarity=0.165 Sum_probs=72.0
Q ss_pred CCchHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEe---------CCCC-CCCHHHHHHHHHHHH-hCC-CCe
Q 018508 71 PSPESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVD---------MEHG-PGGISDALACLHALA-ATG-TPA 138 (355)
Q Consensus 71 ~~~n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilD---------lEh~-~~~~~~a~~~i~a~~-~~g-~~~ 138 (355)
...+.||++.++|++... .+.-+...+..+..+|+|.|+.- .++. +...+++....+++. ... .++
T Consensus 16 ~t~~~lr~~~~~g~~i~m--~tayDa~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vtldem~~h~~aV~r~~~~~~v 93 (275)
T 3vav_A 16 VTVPKLQAMREAGEKIAM--LTCYDASFAALLDRANVDVQLIGDSLGNVLQGQTTTLPVTLDDIAYHTACVARAQPRALI 93 (275)
T ss_dssp CCHHHHHHHHHHTCCEEE--EECCSHHHHHHHHHTTCSEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHTCCSSEE
T ss_pred cCHHHHHHHHHCCCcEEE--EeCcCHHHHHHHHHcCCCEEEECcHHHHHHcCCCCCCccCHHHHHHHHHHHHhcCCCCCE
Confidence 356889999999998654 45678888899999999999774 2332 456777777666654 343 456
Q ss_pred EEcCCCC---CHHH----HHHHHhcCCCeEeecC-CCCHHHHHHHHH
Q 018508 139 ILRLPES---CPTW----AKKALDLGPQGVMFPM-IDSPEAAKEAVS 177 (355)
Q Consensus 139 iVRV~~~---~~~~----i~~aLdaGa~GImvP~-Vesaeea~~vv~ 177 (355)
++=.+-. ++.. +.+++++|+++|-+=- ++-++.++.+++
T Consensus 94 vaD~pfgsY~s~~~a~~~a~rl~kaGa~aVklEdg~~~~~~i~~l~~ 140 (275)
T 3vav_A 94 VADLPFGTYGTPADAFASAVKLMRAGAQMVKFEGGEWLAETVRFLVE 140 (275)
T ss_dssp EEECCTTSCSSHHHHHHHHHHHHHTTCSEEEEECCGGGHHHHHHHHH
T ss_pred EEecCCCCCCCHHHHHHHHHHHHHcCCCEEEECCchhHHHHHHHHHH
Confidence 7777753 3443 4678889999998643 233555666654
No 156
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=88.19 E-value=6.4 Score=30.57 Aligned_cols=102 Identities=13% Similarity=0.047 Sum_probs=60.6
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCC-----CCCHHHHHHHHHHHHhCCCCeEEcCCCCCHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHG-----PGGISDALACLHALAATGTPAILRLPESCPT 148 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~-----~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~ 148 (355)
..+++.|+.-...+ ....+..+..+.+....+|.|++|++-. ..+--+....++.. ....++++=....+..
T Consensus 17 ~~l~~~L~~~g~~v--~~~~~~~~a~~~l~~~~~dlvi~d~~~~~~~~~~~~g~~~~~~l~~~-~~~~~ii~ls~~~~~~ 93 (140)
T 2qr3_A 17 TAVQLLLKNHFSKV--ITLSSPVSLSTVLREENPEVVLLDMNFTSGINNGNEGLFWLHEIKRQ-YRDLPVVLFTAYADID 93 (140)
T ss_dssp HHHHHHHTTTSSEE--EEECCHHHHHHHHHHSCEEEEEEETTTTC-----CCHHHHHHHHHHH-CTTCCEEEEEEGGGHH
T ss_pred HHHHHHHHhCCcEE--EEeCCHHHHHHHHHcCCCCEEEEeCCcCCCCCCCccHHHHHHHHHhh-CcCCCEEEEECCCCHH
Confidence 45666776533322 2222334456677777899999999864 33333333333332 2345555544445566
Q ss_pred HHHHHHhcCCCeEeecCCCCHHHHHHHHHHc
Q 018508 149 WAKKALDLGPQGVMFPMIDSPEAAKEAVSYC 179 (355)
Q Consensus 149 ~i~~aLdaGa~GImvP~Vesaeea~~vv~a~ 179 (355)
.+.++++.|+++++. +=-+.+++...++.+
T Consensus 94 ~~~~~~~~g~~~~l~-kp~~~~~l~~~l~~~ 123 (140)
T 2qr3_A 94 LAVRGIKEGASDFVV-KPWDNQKLLETLLNA 123 (140)
T ss_dssp HHHHHHHTTCCEEEE-ESCCHHHHHHHHHHH
T ss_pred HHHHHHHcCchheee-CCCCHHHHHHHHHHH
Confidence 788899999998753 444678887776655
No 157
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=88.15 E-value=2.5 Score=40.58 Aligned_cols=121 Identities=12% Similarity=0.037 Sum_probs=76.1
Q ss_pred HHHHhhhcCCcEEEEeCCC-------C----CCCHHHHHHHHHHHH----hCCCCeEEcCCCCCH----HHH---HHHHh
Q 018508 98 LAEISGLAGYDFVVVDMEH-------G----PGGISDALACLHALA----ATGTPAILRLPESCP----TWA---KKALD 155 (355)
Q Consensus 98 ~~e~aa~~G~D~vilDlEh-------~----~~~~~~a~~~i~a~~----~~g~~~iVRV~~~~~----~~i---~~aLd 155 (355)
.+..+..+|+..|-|.=.- - ....++....|+++. ..+..++-|...... ..| +...+
T Consensus 121 tv~~l~~aGaagv~iED~~~~k~cgH~~gk~L~p~~e~~~rI~Aa~~A~~~~~~~I~ARtda~a~~gl~~ai~Ra~Ay~e 200 (318)
T 1zlp_A 121 FIRELISAGAKGVFLEDQVWPKKCGHMRGKAVVPAEEHALKIAAAREAIGDSDFFLVARTDARAPHGLEEGIRRANLYKE 200 (318)
T ss_dssp HHHHHHHTTCCEEEEECBCSSCCCSSSSCCCBCCHHHHHHHHHHHHHHHTTSCCEEEEEECTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCcEEEECCCCCCccccCCCCCccCCHHHHHHHHHHHHHhcccCCcEEEEeeHHhhhcCHHHHHHHHHHHHH
Confidence 4456667999998875442 1 234555555555543 234556778765422 223 44568
Q ss_pred cCCCeEeecCCCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEEcc-HHHHHHHHHHhcc
Q 018508 156 LGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVES-EEGVKRAEDIAAV 234 (355)
Q Consensus 156 aGa~GImvP~Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mIET-~~av~nieeIaav 234 (355)
+||++|+++.+.+.++++++.+.+..| .+.-++|- .......+|+.+.
T Consensus 201 AGAd~i~~e~~~~~e~~~~i~~~l~~P-------------------------------~lan~~~~g~~~~~~~~eL~~l 249 (318)
T 1zlp_A 201 AGADATFVEAPANVDELKEVSAKTKGL-------------------------------RIANMIEGGKTPLHTPEEFKEM 249 (318)
T ss_dssp TTCSEEEECCCCSHHHHHHHHHHSCSE-------------------------------EEEEECTTSSSCCCCHHHHHHH
T ss_pred cCCCEEEEcCCCCHHHHHHHHHhcCCC-------------------------------EEEEeccCCCCCCCCHHHHHHc
Confidence 999999999999999999999998643 11112220 0012236777765
Q ss_pred CCccEEEEChhhHHhh
Q 018508 235 DGVDCVQMGPLDLSAS 250 (355)
Q Consensus 235 pgVD~l~iGp~DLs~s 250 (355)
|+..+++|..=+...
T Consensus 250 -Gv~~v~~~~~~~raa 264 (318)
T 1zlp_A 250 -GFHLIAHSLTAVYAT 264 (318)
T ss_dssp -TCCEEEECSHHHHHH
T ss_pred -CCeEEEEchHHHHHH
Confidence 899999998865443
No 158
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=88.15 E-value=7.5 Score=29.90 Aligned_cols=102 Identities=18% Similarity=0.070 Sum_probs=61.2
Q ss_pred HHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHh-CCCCeEEcCCCCCHHHHHHH
Q 018508 75 SLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAA-TGTPAILRLPESCPTWAKKA 153 (355)
Q Consensus 75 ~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~-~g~~~iVRV~~~~~~~i~~a 153 (355)
.++..|...... +..-.+..+..+.+....+|.|++|+.-...+--++...++.... ...++++=....+.....++
T Consensus 17 ~l~~~l~~~g~~--v~~~~~~~~al~~l~~~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~~~~~~~~~~ 94 (122)
T 3gl9_A 17 IVSFNLKKEGYE--VIEAENGQIALEKLSEFTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAKGGEEDESLA 94 (122)
T ss_dssp HHHHHHHHTTCE--EEEESSHHHHHHHHTTBCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESCCSHHHHHHH
T ss_pred HHHHHHHHCCcE--EEEeCCHHHHHHHHHhcCCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecCCchHHHHHH
Confidence 456666543332 222233445667777788999999998655443333333332111 23444554445567778899
Q ss_pred HhcCCCeEeecCCCCHHHHHHHHHHc
Q 018508 154 LDLGPQGVMFPMIDSPEAAKEAVSYC 179 (355)
Q Consensus 154 LdaGa~GImvP~Vesaeea~~vv~a~ 179 (355)
++.|+++.+ +|=-+.+++...++.+
T Consensus 95 ~~~Ga~~~l-~KP~~~~~L~~~i~~~ 119 (122)
T 3gl9_A 95 LSLGARKVM-RKPFSPSQFIEEVKHL 119 (122)
T ss_dssp HHTTCSEEE-ESSCCHHHHHHHHHHH
T ss_pred HhcChhhhc-cCCCCHHHHHHHHHHH
Confidence 999999865 4445678877666543
No 159
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=88.06 E-value=1.4 Score=40.45 Aligned_cols=69 Identities=16% Similarity=0.157 Sum_probs=50.6
Q ss_pred HHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHHHhcCCCeEeecCCCCHHH
Q 018508 96 PTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEA 171 (355)
Q Consensus 96 p~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~aLdaGa~GImvP~Vesaee 171 (355)
.+.++++..+|.|+|++-..++. ..+...+++..++....|+++=+.. +.. +-.|+|++++|.+=+.++
T Consensus 21 ~~~~~~~~~~GtD~i~vGGs~gv-t~~~~~~~v~~ik~~~~Pvvlfp~~--~~~----v~~gaD~~l~pslln~~~ 89 (228)
T 3vzx_A 21 DEQLEILCESGTDAVIIGGSDGV-TEDNVLRMMSKVRRFLVPCVLEVSA--IEA----IVPGFDLYFIPSVLNSKN 89 (228)
T ss_dssp TTHHHHHHTSSCSEEEECCCSCC-CHHHHHHHHHHHTTSSSCEEEECSC--GGG----CCSCCSEEEEEEETTBSS
T ss_pred HHHHHHHHHcCCCEEEECCcCCC-CHHHHHHHHHHhhccCCCEEEeCCC--HHH----ccccCCEEEEeeecCCCC
Confidence 45678889999999999998875 4688888888887677777664433 322 236999999997754433
No 160
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=88.01 E-value=4.5 Score=31.47 Aligned_cols=104 Identities=13% Similarity=0.013 Sum_probs=61.4
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcC-CcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISGLAG-YDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKK 152 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G-~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~ 152 (355)
..+++.|+.-...+ ..-.+..+..+.+.... +|.|++|++-...+--+....++.......++++=....+.....+
T Consensus 21 ~~l~~~L~~~g~~v--~~~~~~~~a~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~ii~~s~~~~~~~~~~ 98 (136)
T 3hdv_A 21 EALILYLKSRGIDA--VGADGAEEARLYLHYQKRIGLMITDLRMQPESGLDLIRTIRASERAALSIIVVSGDTDVEEAVD 98 (136)
T ss_dssp HHHHHHHHHTTCCE--EEESSHHHHHHHHHHCTTEEEEEECSCCSSSCHHHHHHHHHTSTTTTCEEEEEESSCCHHHHHH
T ss_pred HHHHHHHHHcCceE--EEeCCHHHHHHHHHhCCCCcEEEEeccCCCCCHHHHHHHHHhcCCCCCCEEEEeCCCChHHHHH
Confidence 45667776532222 22223334455565566 9999999987654433333333321112234444445556777889
Q ss_pred HHhcCCCeEeecCCCCHHHHHHHHHHcC
Q 018508 153 ALDLGPQGVMFPMIDSPEAAKEAVSYCR 180 (355)
Q Consensus 153 aLdaGa~GImvP~Vesaeea~~vv~a~~ 180 (355)
++..|+++++. +=-+.+++...++.+.
T Consensus 99 ~~~~g~~~~l~-KP~~~~~l~~~i~~~~ 125 (136)
T 3hdv_A 99 VMHLGVVDFLL-KPVDLGKLLELVNKEL 125 (136)
T ss_dssp HHHTTCSEEEE-SSCCHHHHHHHHHHHH
T ss_pred HHhCCcceEEe-CCCCHHHHHHHHHHHh
Confidence 99999998654 4457888887776654
No 161
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=87.77 E-value=15 Score=34.67 Aligned_cols=69 Identities=17% Similarity=0.256 Sum_probs=47.5
Q ss_pred EEEEEEecCC---HHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHHHhcCCCeEe
Q 018508 86 LYGLFLLSFS---PTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVM 162 (355)
Q Consensus 86 ~~gl~v~~~s---p~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~aLdaGa~GIm 162 (355)
.++.-+...+ .+.++.+...|+|+|.+-..+ | . ..++.++..+..+++-|. +...++++.+.|+++|+
T Consensus 79 p~gVnl~~~~~~~~~~~~~~~~~g~d~V~l~~g~-p---~---~~~~~l~~~g~~v~~~v~--s~~~a~~a~~~GaD~i~ 149 (326)
T 3bo9_A 79 PFGVNIILVSPWADDLVKVCIEEKVPVVTFGAGN-P---T---KYIRELKENGTKVIPVVA--SDSLARMVERAGADAVI 149 (326)
T ss_dssp CEEEEEETTSTTHHHHHHHHHHTTCSEEEEESSC-C---H---HHHHHHHHTTCEEEEEES--SHHHHHHHHHTTCSCEE
T ss_pred CEEEEEeccCCCHHHHHHHHHHCCCCEEEECCCC-c---H---HHHHHHHHcCCcEEEEcC--CHHHHHHHHHcCCCEEE
Confidence 4454444433 457788889999999997764 2 2 234445556777777664 46678889999999998
Q ss_pred e
Q 018508 163 F 163 (355)
Q Consensus 163 v 163 (355)
+
T Consensus 150 v 150 (326)
T 3bo9_A 150 A 150 (326)
T ss_dssp E
T ss_pred E
Confidence 8
No 162
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=87.65 E-value=5.3 Score=31.44 Aligned_cols=100 Identities=14% Similarity=-0.015 Sum_probs=61.2
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHh-CCCCeEEcCCCCCHHHHHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAA-TGTPAILRLPESCPTWAKK 152 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~-~g~~~iVRV~~~~~~~i~~ 152 (355)
..++..|......+ ..-.+..+..+.+....+|.|++|+.-...+--+ .++.++. ...++++=....+...+..
T Consensus 18 ~~l~~~L~~~g~~v--~~~~~~~~al~~~~~~~~dlvllD~~l~~~~g~~---l~~~l~~~~~~~ii~ls~~~~~~~~~~ 92 (136)
T 2qzj_A 18 QKLKGFLEEKGISI--DLAYNCEEAIGKIFSNKYDLIFLEIILSDGDGWT---LCKKIRNVTTCPIVYMTYINEDQSILN 92 (136)
T ss_dssp HHHHHHHHTTTCEE--EEESSHHHHHHHHHHCCCSEEEEESEETTEEHHH---HHHHHHTTCCCCEEEEESCCCHHHHHH
T ss_pred HHHHHHHHHCCCEE--EEECCHHHHHHHHHhcCCCEEEEeCCCCCCCHHH---HHHHHccCCCCCEEEEEcCCCHHHHHH
Confidence 45777776533332 2223334556677777899999999864333223 3333332 2445555455556777889
Q ss_pred HHhcCCCeEeecCCCCHHHHHHHHHHc
Q 018508 153 ALDLGPQGVMFPMIDSPEAAKEAVSYC 179 (355)
Q Consensus 153 aLdaGa~GImvP~Vesaeea~~vv~a~ 179 (355)
+++.|+++++ +|--+.+++...++.+
T Consensus 93 ~~~~ga~~~l-~KP~~~~~L~~~l~~~ 118 (136)
T 2qzj_A 93 ALNSGGDDYL-IKPLNLEILYAKVKAI 118 (136)
T ss_dssp HHHTTCCEEE-ESSCCHHHHHHHHHHH
T ss_pred HHHcCCcEEE-ECCCCHHHHHHHHHHH
Confidence 9999999865 4445678887766554
No 163
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=87.58 E-value=4 Score=38.93 Aligned_cols=64 Identities=8% Similarity=0.198 Sum_probs=42.3
Q ss_pred HHHHhhhcC--CcEEEEeCCCCCCCHHHHHHHHHHHHh-CCCCeEEcCCCCCHHHHHHHHhcCCCeEee
Q 018508 98 LAEISGLAG--YDFVVVDMEHGPGGISDALACLHALAA-TGTPAILRLPESCPTWAKKALDLGPQGVMF 163 (355)
Q Consensus 98 ~~e~aa~~G--~D~vilDlEh~~~~~~~a~~~i~a~~~-~g~~~iVRV~~~~~~~i~~aLdaGa~GImv 163 (355)
.++.+...| +|++.+|+-++ +.....+.++.++. .+.++++--+-.+....+++.++|+++|++
T Consensus 110 ~a~~~~~~g~~~~~i~i~~~~G--~~~~~~~~i~~lr~~~~~~~vi~G~v~s~e~A~~a~~aGad~Ivv 176 (336)
T 1ypf_A 110 FVQQLAAEHLTPEYITIDIAHG--HSNAVINMIQHIKKHLPESFVIAGNVGTPEAVRELENAGADATKV 176 (336)
T ss_dssp HHHHHHHTTCCCSEEEEECSSC--CSHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHhcCCCCCEEEEECCCC--CcHHHHHHHHHHHHhCCCCEEEECCcCCHHHHHHHHHcCCCEEEE
Confidence 345566778 99999998664 33444555665543 333444422234577899999999999999
No 164
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=87.53 E-value=2.5 Score=42.30 Aligned_cols=65 Identities=22% Similarity=0.297 Sum_probs=46.0
Q ss_pred HHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHh-C-CCCeEEcCCCCCHHHHHHHHhcCCCeEee
Q 018508 96 PTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAA-T-GTPAILRLPESCPTWAKKALDLGPQGVMF 163 (355)
Q Consensus 96 p~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~-~-g~~~iVRV~~~~~~~i~~aLdaGa~GImv 163 (355)
.+.++.+..+|+|+|.++.-|+.. ....+.++.++. . +.++++- +......++++.++|+++|.+
T Consensus 239 ~~~a~~l~~aGvd~v~i~~~~G~~--~~~~e~i~~i~~~~p~~pvi~g-~~~t~e~a~~l~~~G~d~I~v 305 (494)
T 1vrd_A 239 MERVEKLVKAGVDVIVIDTAHGHS--RRVIETLEMIKADYPDLPVVAG-NVATPEGTEALIKAGADAVKV 305 (494)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCSS--HHHHHHHHHHHHHCTTSCEEEE-EECSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHhCCCEEEEEecCCch--HHHHHHHHHHHHHCCCceEEeC-CcCCHHHHHHHHHcCCCEEEE
Confidence 467778889999999999988732 333444554432 3 5666552 344567788999999999998
No 165
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=87.45 E-value=6.4 Score=37.23 Aligned_cols=83 Identities=8% Similarity=-0.001 Sum_probs=56.5
Q ss_pred HHHHhhhcCCcEEEEeCCCC-------------CCCHHHHHHHHHHHHh----CCCCeEEcCCCC-C----HHHH---HH
Q 018508 98 LAEISGLAGYDFVVVDMEHG-------------PGGISDALACLHALAA----TGTPAILRLPES-C----PTWA---KK 152 (355)
Q Consensus 98 ~~e~aa~~G~D~vilDlEh~-------------~~~~~~a~~~i~a~~~----~g~~~iVRV~~~-~----~~~i---~~ 152 (355)
.+..+..+|+..|-|.=.-. ....++..+-|+++.. .+..++-|.... . ...| +.
T Consensus 99 ~v~~l~~aGaagv~iED~~~~k~cgH~gg~~k~l~p~~e~~~rI~Aa~~a~~~~~~~i~aRtda~~a~~g~~~ai~Ra~a 178 (295)
T 1s2w_A 99 LVRKLEDRGVAGACLEDKLFPKTNSLHDGRAQPLADIEEFALKIKACKDSQTDPDFCIVARVEAFIAGWGLDEALKRAEA 178 (295)
T ss_dssp HHHHHHHTTCCEEEEECBCC--------CTTCCBCCHHHHHHHHHHHHHHCSSTTCEEEEEECTTTTTCCHHHHHHHHHH
T ss_pred HHHHHHHcCCcEEEECCCCCCccccccCCCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehHHhccccHHHHHHHHHH
Confidence 44556689999988754421 2445566666666542 334567787654 2 2334 45
Q ss_pred HHhcCCCeEeecC-CCCHHHHHHHHHHcC
Q 018508 153 ALDLGPQGVMFPM-IDSPEAAKEAVSYCR 180 (355)
Q Consensus 153 aLdaGa~GImvP~-Vesaeea~~vv~a~~ 180 (355)
..++||++|+++. +.+.++++++.+.++
T Consensus 179 y~eAGAd~i~~e~~~~~~~~~~~i~~~~~ 207 (295)
T 1s2w_A 179 YRNAGADAILMHSKKADPSDIEAFMKAWN 207 (295)
T ss_dssp HHHTTCSEEEECCCSSSSHHHHHHHHHHT
T ss_pred HHHcCCCEEEEcCCCCCHHHHHHHHHHcC
Confidence 6689999999986 889999999999986
No 166
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=87.43 E-value=8.9 Score=36.25 Aligned_cols=59 Identities=15% Similarity=0.225 Sum_probs=43.8
Q ss_pred HHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHHHhcCCCeEee
Q 018508 96 PTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMF 163 (355)
Q Consensus 96 p~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~aLdaGa~GImv 163 (355)
.+.++.+...|+|+|.+-..+. ...++.++..+.++++++. ....++.+.+.|+++|++
T Consensus 78 ~~~~~~a~~~g~d~V~~~~g~p-------~~~i~~l~~~g~~v~~~v~--~~~~a~~~~~~GaD~i~v 136 (332)
T 2z6i_A 78 EDIVDLVIEEGVKVVTTGAGNP-------SKYMERFHEAGIIVIPVVP--SVALAKRMEKIGADAVIA 136 (332)
T ss_dssp HHHHHHHHHTTCSEEEECSSCG-------GGTHHHHHHTTCEEEEEES--SHHHHHHHHHTTCSCEEE
T ss_pred HHHHHHHHHCCCCEEEECCCCh-------HHHHHHHHHcCCeEEEEeC--CHHHHHHHHHcCCCEEEE
Confidence 3567888899999999987642 1234444456888888885 355678888999999988
No 167
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=87.40 E-value=8.1 Score=29.49 Aligned_cols=103 Identities=15% Similarity=0.070 Sum_probs=60.2
Q ss_pred hHHHHHHHcCCc-EEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHh-CCCCeEEcCCCCCHHHHH
Q 018508 74 ESLKYRLQSNET-LYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAA-TGTPAILRLPESCPTWAK 151 (355)
Q Consensus 74 n~lk~~L~~G~~-~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~-~g~~~iVRV~~~~~~~i~ 151 (355)
..+++.|..-.. .+..+ .+..+..+.+....+|.+++|+.-...+--+....++.... ...++++=....+...+.
T Consensus 18 ~~l~~~l~~~~~~~v~~~--~~~~~a~~~~~~~~~dlvi~D~~l~~~~g~~l~~~l~~~~~~~~~~ii~~s~~~~~~~~~ 95 (128)
T 1jbe_A 18 RIVRNLLKELGFNNVEEA--EDGVDALNKLQAGGYGFVISDWNMPNMDGLELLKTIRAXXAMSALPVLMVTAEAKKENII 95 (128)
T ss_dssp HHHHHHHHHTTCCCEEEE--SSHHHHHHHHTTCCCCEEEEESCCSSSCHHHHHHHHHC--CCTTCCEEEEESSCCHHHHH
T ss_pred HHHHHHHHHcCCcEEEee--CCHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhcccCCCcEEEEecCccHHHHH
Confidence 346666654222 22221 23344556666777999999998765443343333433212 234444444555677788
Q ss_pred HHHhcCCCeEeecCCCCHHHHHHHHHHc
Q 018508 152 KALDLGPQGVMFPMIDSPEAAKEAVSYC 179 (355)
Q Consensus 152 ~aLdaGa~GImvP~Vesaeea~~vv~a~ 179 (355)
++++.|+++++ +|--+.+++...++.+
T Consensus 96 ~~~~~ga~~~l-~KP~~~~~l~~~i~~~ 122 (128)
T 1jbe_A 96 AAAQAGASGYV-VKPFTAATLEEKLNKI 122 (128)
T ss_dssp HHHHTTCSEEE-ESSCCHHHHHHHHHHH
T ss_pred HHHHhCcCcee-ecCCCHHHHHHHHHHH
Confidence 99999999865 4445678877666543
No 168
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=87.37 E-value=7.6 Score=29.12 Aligned_cols=101 Identities=10% Similarity=0.031 Sum_probs=61.5
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKA 153 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~a 153 (355)
..+++.|......+. .-.+..+..+.+....+|.+++|++-...+--++...++. ....++++=....+.....++
T Consensus 15 ~~l~~~l~~~~~~v~--~~~~~~~a~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~--~~~~~ii~~s~~~~~~~~~~~ 90 (120)
T 2a9o_A 15 DIIKFNMTKEGYEVV--TAFNGREALEQFEAEQPDIIILDLMLPEIDGLEVAKTIRK--TSSVPILMLSAKDSEFDKVIG 90 (120)
T ss_dssp HHHHHHHHHTTCEEE--EESSHHHHHHHHHHHCCSEEEECSSCSSSCHHHHHHHHHH--HCCCCEEEEESCCSHHHHHHH
T ss_pred HHHHHHHHhcCcEEE--EecCHHHHHHHHHhCCCCEEEEeccCCCCCHHHHHHHHHh--CCCCCEEEEecCCchHHHHHH
Confidence 346666654333222 2223344556666778999999998765444444444443 234555554455566677889
Q ss_pred HhcCCCeEeecCCCCHHHHHHHHHHc
Q 018508 154 LDLGPQGVMFPMIDSPEAAKEAVSYC 179 (355)
Q Consensus 154 LdaGa~GImvP~Vesaeea~~vv~a~ 179 (355)
++.|+++++ +|--+.+++...++.+
T Consensus 91 ~~~g~~~~l-~Kp~~~~~l~~~i~~~ 115 (120)
T 2a9o_A 91 LELGADDYV-TKPFSNRELQARVKAL 115 (120)
T ss_dssp HHHTCSEEE-ESSCCHHHHHHHHHHH
T ss_pred HhCCHhheE-eCCCCHHHHHHHHHHH
Confidence 999999865 4445778887766543
No 169
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=87.24 E-value=1 Score=41.05 Aligned_cols=183 Identities=10% Similarity=0.087 Sum_probs=100.5
Q ss_pred HHHHHhhhcCCcEEEEeCCCCC--CCHHHHHHHHHHHHh-C-CCCeE--EcCCCCCHHHHHHHHhcCCCeEeecCCCCHH
Q 018508 97 TLAEISGLAGYDFVVVDMEHGP--GGISDALACLHALAA-T-GTPAI--LRLPESCPTWAKKALDLGPQGVMFPMIDSPE 170 (355)
Q Consensus 97 ~~~e~aa~~G~D~vilDlEh~~--~~~~~a~~~i~a~~~-~-g~~~i--VRV~~~~~~~i~~aLdaGa~GImvP~Vesae 170 (355)
+.++.+...|+||+=+|.-|+. ....--...+++++. . ..+.- .-|++++. ++....+ |+.|.|- .+...
T Consensus 22 ~~i~~~~~~g~d~iHvDvmDg~fvpn~t~G~~~v~~lr~~~p~~~~dvhLmv~dp~~-~i~~~~~--Ad~itvH-~ea~~ 97 (227)
T 1tqx_A 22 EETQRMESLGAEWIHLDVMDMHFVPNLSFGPPVINNLKKYTKSIFFDVHLMVEYPEK-YVPLLKT--SNQLTFH-FEALN 97 (227)
T ss_dssp HHHHHHHHTTCSEEEEEEEBSSSSSCBCCCHHHHHHHGGGCSSCEEEEEEESSCGGG-GGGGCTT--SSEEEEE-GGGGT
T ss_pred HHHHHHHHcCCCEEEEEEEeCCcCcchhcCHHHHHHHHHhCCCCcEEEEEEEcCHHH-HHHHHHh--CCEEEEe-ecCCc
Confidence 4456777889999999987763 121111234444443 2 23322 33444322 3444444 6666543 34333
Q ss_pred -HHHHHHH---HcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEE--ccHHHHHHHHHHhccCCccEEEECh
Q 018508 171 -AAKEAVS---YCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQV--ESEEGVKRAEDIAAVDGVDCVQMGP 244 (355)
Q Consensus 171 -ea~~vv~---a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mI--ET~~av~nieeIaavpgVD~l~iGp 244 (355)
.+.++++ .++.. | ..+++-+ +|+ ++.+++++....+|.|.+++
T Consensus 98 ~~~~~~i~~~~~i~~~--G---------------------------~k~gvalnp~tp--~~~~~~~l~~g~~D~Vlvms 146 (227)
T 1tqx_A 98 EDTERCIQLAKEIRDN--N---------------------------LWCGISIKPKTD--VQKLVPILDTNLINTVLVMT 146 (227)
T ss_dssp TCHHHHHHHHHHHHTT--T---------------------------CEEEEEECTTSC--GGGGHHHHTTTCCSEEEEES
T ss_pred cCHHHHHHHHHHHHHc--C---------------------------CeEEEEeCCCCc--HHHHHHHhhcCCcCEEEEee
Confidence 5666676 55421 1 2344444 455 67778887643599998866
Q ss_pred hhHHhhcCCCCCCCCHHHHHHHHHHHHHHHhCCCce--eecccCCchhHHHHHHCCCCEEEecchHHHHHH-HHHHHHHH
Q 018508 245 LDLSASMGYLWDPGHRKVREMMRVAEKGVLGGGKAY--LAGFAMPHDAPLEMKSRGYHMVSGAVDVGLFRS-AAVEDVAR 321 (355)
Q Consensus 245 ~DLs~slG~~~~~~~p~v~~ai~~iv~aa~a~g~~~--~g~~~~d~~~a~~~~~~G~~~vs~~~D~~ll~~-~~~~~~~~ 321 (355)
-. -|..+|...|...+-++++.+... +..+ -||+ +++.+..+++.|.+.+++|+-+ +.. -..+.++.
T Consensus 147 V~----pGf~gq~f~~~~l~ki~~lr~~~~--~~~I~VdGGI--~~~ti~~~~~aGAd~~V~GsaI--f~~~d~~~~i~~ 216 (227)
T 1tqx_A 147 VE----PGFGGQSFMHDMMGKVSFLRKKYK--NLNIQVDGGL--NIETTEISASHGANIIVAGTSI--FNAEDPKYVIDT 216 (227)
T ss_dssp SC----TTCSSCCCCGGGHHHHHHHHHHCT--TCEEEEESSC--CHHHHHHHHHHTCCEEEESHHH--HTCSSHHHHHHH
T ss_pred ec----cCCCCcccchHHHHHHHHHHHhcc--CCeEEEECCC--CHHHHHHHHHcCCCEEEEeHHH--hCCCCHHHHHHH
Confidence 43 344456555655555554433321 3332 3333 4678889999999999999654 321 23444555
Q ss_pred HHH
Q 018508 322 FKM 324 (355)
Q Consensus 322 ~r~ 324 (355)
+|.
T Consensus 217 l~~ 219 (227)
T 1tqx_A 217 MRV 219 (227)
T ss_dssp HHH
T ss_pred HHH
Confidence 544
No 170
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=87.19 E-value=7.3 Score=30.46 Aligned_cols=99 Identities=11% Similarity=0.010 Sum_probs=60.2
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHh--CCCCeEEcCCCCCHHHHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAA--TGTPAILRLPESCPTWAK 151 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~--~g~~~iVRV~~~~~~~i~ 151 (355)
..+++.|+.-... +..-.+..+..+.+....+|.|++|+ -.. . ...+.++.++. ...++++=....+...+.
T Consensus 18 ~~l~~~L~~~g~~--v~~~~~~~~a~~~l~~~~~dlvi~d~-~~~--~-~g~~~~~~l~~~~~~~pii~ls~~~~~~~~~ 91 (142)
T 2qxy_A 18 LAVKNALEKDGFN--VIWAKNEQEAFTFLRREKIDLVFVDV-FEG--E-ESLNLIRRIREEFPDTKVAVLSAYVDKDLII 91 (142)
T ss_dssp HHHHHHHGGGTCE--EEEESSHHHHHHHHTTSCCSEEEEEC-TTT--H-HHHHHHHHHHHHCTTCEEEEEESCCCHHHHH
T ss_pred HHHHHHHHhCCCE--EEEECCHHHHHHHHhccCCCEEEEeC-CCC--C-cHHHHHHHHHHHCCCCCEEEEECCCCHHHHH
Confidence 4567777653322 22223334566777778899999999 322 2 22333443332 234555545555677788
Q ss_pred HHHhcCCCeEeecCCCCHHHHHHHHHHc
Q 018508 152 KALDLGPQGVMFPMIDSPEAAKEAVSYC 179 (355)
Q Consensus 152 ~aLdaGa~GImvP~Vesaeea~~vv~a~ 179 (355)
+++..|+++++ ++--+.+++...++.+
T Consensus 92 ~~~~~g~~~~l-~kP~~~~~l~~~i~~~ 118 (142)
T 2qxy_A 92 NSVKAGAVDYI-LKPFRLDYLLERVKKI 118 (142)
T ss_dssp HHHHHTCSCEE-ESSCCHHHHHHHHHHH
T ss_pred HHHHCCcceeE-eCCCCHHHHHHHHHHH
Confidence 99999999864 4555788887777654
No 171
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=87.07 E-value=3.8 Score=31.08 Aligned_cols=102 Identities=10% Similarity=-0.055 Sum_probs=60.2
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCC-CCCHHHHHHHHHHHH-hCCCCeEEcCCCCCHHHHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHG-PGGISDALACLHALA-ATGTPAILRLPESCPTWAK 151 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~-~~~~~~a~~~i~a~~-~~g~~~iVRV~~~~~~~i~ 151 (355)
..+++.|+.-...+ ....+..+..+.+....+|.|++|+.-. ..+-.+....++... ....++++= ...+.....
T Consensus 19 ~~l~~~L~~~g~~v--~~~~~~~~a~~~~~~~~~dlvi~d~~~~~~~~g~~~~~~l~~~~~~~~~~ii~~-~~~~~~~~~ 95 (127)
T 2gkg_A 19 ATLRSALEGRGFTV--DETTDGKGSVEQIRRDRPDLVVLAVDLSAGQNGYLICGKLKKDDDLKNVPIVII-GNPDGFAQH 95 (127)
T ss_dssp HHHHHHHHHHTCEE--EEECCHHHHHHHHHHHCCSEEEEESBCGGGCBHHHHHHHHHHSTTTTTSCEEEE-ECGGGHHHH
T ss_pred HHHHHHHHhcCceE--EEecCHHHHHHHHHhcCCCEEEEeCCCCCCCCHHHHHHHHhcCccccCCCEEEE-ecCCchhHH
Confidence 45666676522222 2223334456666777899999999865 444333333343321 123444433 555566778
Q ss_pred HHHhcCCCeEeecCCCCHHHHHHHHHHc
Q 018508 152 KALDLGPQGVMFPMIDSPEAAKEAVSYC 179 (355)
Q Consensus 152 ~aLdaGa~GImvP~Vesaeea~~vv~a~ 179 (355)
.+++.|+++++ ++--+.+++...++.+
T Consensus 96 ~~~~~g~~~~l-~kp~~~~~l~~~i~~~ 122 (127)
T 2gkg_A 96 RKLKAHADEYV-AKPVDADQLVERAGAL 122 (127)
T ss_dssp HHSTTCCSEEE-ESSCCHHHHHHHHHHH
T ss_pred HHHHhCcchhe-eCCCCHHHHHHHHHHH
Confidence 89999999865 4555778887666554
No 172
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=87.03 E-value=15 Score=33.61 Aligned_cols=69 Identities=16% Similarity=0.161 Sum_probs=45.5
Q ss_pred CHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHHHhcCCCeEeecCCCCHH
Q 018508 95 SPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPE 170 (355)
Q Consensus 95 sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~aLdaGa~GImvP~Vesae 170 (355)
+.+.++.+..+|+|.|.+=...+ ...+...+++++++....|+++=.-..++ +..|++|+++|-+-..|
T Consensus 22 t~~~~~~l~~~GaD~ielG~S~G-vt~~~~~~~v~~ir~~~~Pivlm~y~~n~------i~~G~dg~iiPdLp~ee 90 (240)
T 1viz_A 22 PDEQLEILCESGTDAVIIGGSDG-VTEDNVLRMMSKVRRFLVPCVLEVSAIEA------IVPGFDLYFIPSVLNSK 90 (240)
T ss_dssp CHHHHHHHHTSCCSEEEECC-----CHHHHHHHHHHHTTSSSCEEEECSCGGG------CCSCCSEEEEEEETTBS
T ss_pred cHHHHHHHHHcCCCEEEECCCCC-CCHHHHHHHHHHhhCcCCCEEEecCcccc------ccCCCCEEEEcccCccc
Confidence 44678889999999999999655 34666778888887644454442221111 16899999999885543
No 173
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=86.98 E-value=4.4 Score=36.27 Aligned_cols=123 Identities=11% Similarity=0.043 Sum_probs=73.4
Q ss_pred HHHHhCCCCeEEcCCCCCH--HHHHHHHhcCCCeEeecCCCCHHHHHHHHHHc-CCCCCCCCCCcccccccccCCCCccc
Q 018508 129 HALAATGTPAILRLPESCP--TWAKKALDLGPQGVMFPMIDSPEAAKEAVSYC-RFPPSGVRGSAHTVVRASGYGIDEGY 205 (355)
Q Consensus 129 ~a~~~~g~~~iVRV~~~~~--~~i~~aLdaGa~GImvP~Vesaeea~~vv~a~-~~pP~G~Rg~g~~~~ra~~~g~~~~y 205 (355)
..+...+..+++|..+.+. ..+.++++.|++.|-+..- +....+.+.+.. +|+.
T Consensus 11 ~~l~~~~~i~v~r~~~~~~~~~~~~al~~gGv~~iel~~k-~~~~~~~i~~l~~~~~~---------------------- 67 (214)
T 1wbh_A 11 SILTTGPVVPVIVVKKLEHAVPMAKALVAGGVRVLNVTLR-TECAVDAIRAIAKEVPE---------------------- 67 (214)
T ss_dssp HHHHSCSEEEEECCSSGGGHHHHHHHHHHTTCCEEEEESC-STTHHHHHHHHHHHCTT----------------------
T ss_pred HHHHHCCEEEEEECCCHHHHHHHHHHHHHcCCCEEEEeCC-ChhHHHHHHHHHHHCcC----------------------
Confidence 3455678889999987664 3578899999999999864 333332222222 2221
Q ss_pred cccCCCceEEEEE-EccHHHHHHHHHHhccCCccEEEEChhhHHhhcCCCCCCCCHHHHHHHHHHHHHHHhCCCceeecc
Q 018508 206 LSNYEEELLIMCQ-VESEEGVKRAEDIAAVDGVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVAEKGVLGGGKAYLAGF 284 (355)
Q Consensus 206 ~~~~n~~i~vi~m-IET~~av~nieeIaavpgVD~l~iGp~DLs~slG~~~~~~~p~v~~ai~~iv~aa~a~g~~~~g~~ 284 (355)
..+.+- +=+. +.++.-.+. |.|++..|..|. .+++.|+..|...+-|
T Consensus 68 -------~~vgagtvi~~---d~~~~A~~a-GAd~v~~p~~d~--------------------~v~~~~~~~g~~~i~G- 115 (214)
T 1wbh_A 68 -------AIVGAGTVLNP---QQLAEVTEA-GAQFAISPGLTE--------------------PLLKAATEGTIPLIPG- 115 (214)
T ss_dssp -------SEEEEESCCSH---HHHHHHHHH-TCSCEEESSCCH--------------------HHHHHHHHSSSCEEEE-
T ss_pred -------CEEeeCEEEEH---HHHHHHHHc-CCCEEEcCCCCH--------------------HHHHHHHHhCCCEEEe-
Confidence 111111 1122 333332222 678888665432 3556777788765544
Q ss_pred cCCchhHHHHHHCCCCEEEecc
Q 018508 285 AMPHDAPLEMKSRGYHMVSGAV 306 (355)
Q Consensus 285 ~~d~~~a~~~~~~G~~~vs~~~ 306 (355)
+.+++++....+.|++.+-+-+
T Consensus 116 ~~t~~e~~~A~~~Gad~v~~Fp 137 (214)
T 1wbh_A 116 ISTVSELMLGMDYGLKEFKFFP 137 (214)
T ss_dssp ESSHHHHHHHHHTTCCEEEETT
T ss_pred cCCHHHHHHHHHCCCCEEEEec
Confidence 4668888888899999886643
No 174
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=86.95 E-value=3.1 Score=39.32 Aligned_cols=120 Identities=16% Similarity=0.108 Sum_probs=77.3
Q ss_pred HHHHhhhcCCcEEEEeCCCC-------------CCCHHHHHHHHHHHHh----CCCCeEEcCCCC-C----HHHH---HH
Q 018508 98 LAEISGLAGYDFVVVDMEHG-------------PGGISDALACLHALAA----TGTPAILRLPES-C----PTWA---KK 152 (355)
Q Consensus 98 ~~e~aa~~G~D~vilDlEh~-------------~~~~~~a~~~i~a~~~----~g~~~iVRV~~~-~----~~~i---~~ 152 (355)
.+..+..+|+..|-|.=.-. ....+++..-|+++.. .+..++-|.... . ...| +.
T Consensus 95 ~v~~l~~aGa~gv~iED~~~~k~cgH~~~~~k~l~p~~e~~~kI~Aa~~a~~~~~~~i~aRtda~~a~~g~~~ai~Ra~a 174 (290)
T 2hjp_A 95 VVPQYEAAGASAIVMEDKTFPKDTSLRTDGRQELVRIEEFQGKIAAATAARADRDFVVIARVEALIAGLGQQEAVRRGQA 174 (290)
T ss_dssp HHHHHHHHTCSEEEEECBCSSCCC-------CCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTTTTTCCHHHHHHHHHH
T ss_pred HHHHHHHhCCeEEEEcCCCCCccccccccCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehHhhccccHHHHHHHHHH
Confidence 44556679999988754421 2345565666665532 344567787654 1 2334 44
Q ss_pred HHhcCCCeEeecC-CCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEE-EEccHHHHHHHHH
Q 018508 153 ALDLGPQGVMFPM-IDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMC-QVESEEGVKRAED 230 (355)
Q Consensus 153 aLdaGa~GImvP~-Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~-mIET~~av~niee 230 (355)
..++||++|+++. +.+.++++++.+.+.-| +.+++ +.|-+ ....+|
T Consensus 175 y~eAGAd~i~~e~~~~~~~~~~~i~~~~~~~------------------------------vP~i~n~~~~~--~~~~~e 222 (290)
T 2hjp_A 175 YEEAGADAILIHSRQKTPDEILAFVKSWPGK------------------------------VPLVLVPTAYP--QLTEAD 222 (290)
T ss_dssp HHHTTCSEEEECCCCSSSHHHHHHHHHCCCS------------------------------SCEEECGGGCT--TSCHHH
T ss_pred HHHcCCcEEEeCCCCCCHHHHHHHHHHcCCC------------------------------CCEEEeccCCC--CCCHHH
Confidence 5679999999999 99999999999988621 11222 22331 225688
Q ss_pred HhccCC-ccEEEEChhhHHhh
Q 018508 231 IAAVDG-VDCVQMGPLDLSAS 250 (355)
Q Consensus 231 Iaavpg-VD~l~iGp~DLs~s 250 (355)
+.+. | +..+++|..=+..+
T Consensus 223 L~~l-G~v~~v~~~~~~~raa 242 (290)
T 2hjp_A 223 IAAL-SKVGIVIYGNHAIRAA 242 (290)
T ss_dssp HHTC-TTEEEEEECSHHHHHH
T ss_pred HHhc-CCeeEEEechHHHHHH
Confidence 8876 7 99999998855443
No 175
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=86.87 E-value=3.6 Score=31.81 Aligned_cols=101 Identities=11% Similarity=-0.055 Sum_probs=57.1
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHh-CCCCeEEcCCCCCHHHHHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAA-TGTPAILRLPESCPTWAKK 152 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~-~g~~~iVRV~~~~~~~i~~ 152 (355)
..+++.|..| ..+ ..-.+..+..+.+....+|.|++|+.-...+--++...++.... ...++++=....+... ..
T Consensus 18 ~~l~~~l~~~-~~v--~~~~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~~~~~~~-~~ 93 (133)
T 3nhm_A 18 ETLRLLLSGE-FDC--TTAADGASGLQQALAHPPDVLISDVNMDGMDGYALCGHFRSEPTLKHIPVIFVSGYAPRTE-GP 93 (133)
T ss_dssp HHHHHHHTTT-SEE--EEESSHHHHHHHHHHSCCSEEEECSSCSSSCHHHHHHHHHHSTTTTTCCEEEEESCCC------
T ss_pred HHHHHHHhCC-cEE--EEECCHHHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhCCccCCCCEEEEeCCCcHhH-HH
Confidence 4566777633 322 22233445667777788999999998765454444444443211 2344444444444444 78
Q ss_pred HHhcCCCeEeecCCCCHHHHHHHHHHc
Q 018508 153 ALDLGPQGVMFPMIDSPEAAKEAVSYC 179 (355)
Q Consensus 153 aLdaGa~GImvP~Vesaeea~~vv~a~ 179 (355)
++..|+++++ ++=-+.+++...++.+
T Consensus 94 ~~~~g~~~~l-~KP~~~~~l~~~i~~~ 119 (133)
T 3nhm_A 94 ADQPVPDAYL-VKPVKPPVLIAQLHAL 119 (133)
T ss_dssp TTSCCCSEEE-ESSCCHHHHHHHHHHH
T ss_pred HhhcCCceEE-eccCCHHHHHHHHHHH
Confidence 8899998865 4556788887766654
No 176
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=86.78 E-value=21 Score=33.49 Aligned_cols=188 Identities=13% Similarity=0.032 Sum_probs=103.6
Q ss_pred chHHHHHHHcCCcEEEEE-EecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHh-CCCC--eEEcCC----C
Q 018508 73 PESLKYRLQSNETLYGLF-LLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAA-TGTP--AILRLP----E 144 (355)
Q Consensus 73 ~n~lk~~L~~G~~~~gl~-v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~-~g~~--~iVRV~----~ 144 (355)
.++|.+.|.-.-|++.-= ....+++.+..+...|.-.++.- +. ..+.+.+++.++.++. ...+ +-+=++ .
T Consensus 5 ~~~~~~~l~~~~Pii~apM~gvs~~~la~av~~aGglG~i~~-~~-~~s~~~l~~~i~~i~~~~~~p~~v~l~v~~~~~~ 82 (328)
T 2gjl_A 5 RTRFTETFGVEHPIMQGGMQWVGRAEMAAAVANAGGLATLSA-LT-QPSPEALAAEIARCRELTDRPFGVNLTLLPTQKP 82 (328)
T ss_dssp CCHHHHHHTCSSSEEECCCTTTCSHHHHHHHHHTTSBCEEET-TT-SSSHHHHHHHHHHHHHHCSSCCEEEEEECCCSSC
T ss_pred hhhHHHHhCCCCCEEECCCCCCCcHHHHHHHHHCCCeEEeCC-CC-CCCHHHHHHHHHHHHHhcCCCeEEEEeccccccC
Confidence 356777775555655322 24578888888888886544432 11 1235666666666542 2222 222223 2
Q ss_pred CC-HHHHHHHHhcCCCeEeecCCCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEEccHH
Q 018508 145 SC-PTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEE 223 (355)
Q Consensus 145 ~~-~~~i~~aLdaGa~GImvP~Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mIET~~ 223 (355)
.+ ...+..+++.|+++|.+..-...+ +++.++.. .+.++..+-|++
T Consensus 83 ~~~~~~~~~~~~~g~d~V~~~~g~p~~----~~~~l~~~-----------------------------gi~vi~~v~t~~ 129 (328)
T 2gjl_A 83 VPYAEYRAAIIEAGIRVVETAGNDPGE----HIAEFRRH-----------------------------GVKVIHKCTAVR 129 (328)
T ss_dssp CCHHHHHHHHHHTTCCEEEEEESCCHH----HHHHHHHT-----------------------------TCEEEEEESSHH
T ss_pred ccHHHHHHHHHhcCCCEEEEcCCCcHH----HHHHHHHc-----------------------------CCCEEeeCCCHH
Confidence 23 356788899999999988655433 33333210 245667787776
Q ss_pred HHHHHHHHhccCCccEEEE-ChhhHHhhcCCCCCCCCHHHHHHHHHHHHHHHhCCCce--eecccCCchhHHHHHHCCCC
Q 018508 224 GVKRAEDIAAVDGVDCVQM-GPLDLSASMGYLWDPGHRKVREMMRVAEKGVLGGGKAY--LAGFAMPHDAPLEMKSRGYH 300 (355)
Q Consensus 224 av~nieeIaavpgVD~l~i-Gp~DLs~slG~~~~~~~p~v~~ai~~iv~aa~a~g~~~--~g~~~~d~~~a~~~~~~G~~ 300 (355)
-...+.+ .|+|+|.+ |.. .=|..+....+. ...+.++.+. ..+++ .|++ .+++.+..++++|.+
T Consensus 130 ~a~~~~~----~GaD~i~v~g~~----~GG~~G~~~~~~-~~~l~~v~~~---~~iPviaaGGI-~~~~~v~~al~~GAd 196 (328)
T 2gjl_A 130 HALKAER----LGVDAVSIDGFE----CAGHPGEDDIPG-LVLLPAAANR---LRVPIIASGGF-ADGRGLVAALALGAD 196 (328)
T ss_dssp HHHHHHH----TTCSEEEEECTT----CSBCCCSSCCCH-HHHHHHHHTT---CCSCEEEESSC-CSHHHHHHHHHHTCS
T ss_pred HHHHHHH----cCCCEEEEECCC----CCcCCCCccccH-HHHHHHHHHh---cCCCEEEECCC-CCHHHHHHHHHcCCC
Confidence 5443322 47899988 542 012322211122 2333333221 24443 2333 356778888889999
Q ss_pred EEEecchH
Q 018508 301 MVSGAVDV 308 (355)
Q Consensus 301 ~vs~~~D~ 308 (355)
++.+|+-.
T Consensus 197 gV~vGs~~ 204 (328)
T 2gjl_A 197 AINMGTRF 204 (328)
T ss_dssp EEEESHHH
T ss_pred EEEECHHH
Confidence 99999654
No 177
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=86.74 E-value=2.2 Score=38.18 Aligned_cols=76 Identities=18% Similarity=0.188 Sum_probs=43.4
Q ss_pred CHHHHHHhhhcCCcEEEE-eCCC----CCCCHHHHHHHHHHHHhCCCCeEEcCCCC-CHHHHHHHHhcCCCeEeecCC--
Q 018508 95 SPTLAEISGLAGYDFVVV-DMEH----GPGGISDALACLHALAATGTPAILRLPES-CPTWAKKALDLGPQGVMFPMI-- 166 (355)
Q Consensus 95 sp~~~e~aa~~G~D~vil-DlEh----~~~~~~~a~~~i~a~~~~g~~~iVRV~~~-~~~~i~~aLdaGa~GImvP~V-- 166 (355)
..+.++.+...|+|+|.+ |+.. ...+.+ .++.+...+.+ ++...+. +...+..+++.|+++|+++..
T Consensus 32 ~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~----~i~~i~~~~ip-vi~~Ggi~~~~~~~~~~~~Gad~V~lg~~~l 106 (241)
T 1qo2_A 32 PVELVEKLIEEGFTLIHVVDLSNAIENSGENLP----VLEKLSEFAEH-IQIGGGIRSLDYAEKLRKLGYRRQIVSSKVL 106 (241)
T ss_dssp HHHHHHHHHHTTCCCEEEEEHHHHHHCCCTTHH----HHHHGGGGGGG-EEEESSCCSHHHHHHHHHTTCCEEEECHHHH
T ss_pred HHHHHHHHHHcCCCEEEEecccccccCCchhHH----HHHHHHhcCCc-EEEECCCCCHHHHHHHHHCCCCEEEECchHh
Confidence 345678888899998765 3211 112222 23332222334 3333333 456788999999999998764
Q ss_pred CCHHHHHHH
Q 018508 167 DSPEAAKEA 175 (355)
Q Consensus 167 esaeea~~v 175 (355)
++++.++++
T Consensus 107 ~~p~~~~~~ 115 (241)
T 1qo2_A 107 EDPSFLKSL 115 (241)
T ss_dssp HCTTHHHHH
T ss_pred hChHHHHHH
Confidence 344445555
No 178
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=86.72 E-value=22 Score=34.27 Aligned_cols=146 Identities=10% Similarity=0.020 Sum_probs=76.6
Q ss_pred CHHHHHHHHHHHHhCCCCeEEcCCCCCHH-HHHHHHhcCCCeEeecCC-------C---CHHHHHHHHHHcCCCCCCCCC
Q 018508 120 GISDALACLHALAATGTPAILRLPESCPT-WAKKALDLGPQGVMFPMI-------D---SPEAAKEAVSYCRFPPSGVRG 188 (355)
Q Consensus 120 ~~~~a~~~i~a~~~~g~~~iVRV~~~~~~-~i~~aLdaGa~GImvP~V-------e---saeea~~vv~a~~~pP~G~Rg 188 (355)
+.+...+.++.++..+.+++|-+...... ..+.+.++|++.|.+.-. . +.++++++.+..
T Consensus 140 d~~~~~~~i~~~~~~g~~v~~~v~~~~~~e~a~~~~~agad~i~i~~~~~~~~~~~~~~~~~~i~~l~~~~--------- 210 (393)
T 2qr6_A 140 DTELLSERIAQVRDSGEIVAVRVSPQNVREIAPIVIKAGADLLVIQGTLISAEHVNTGGEALNLKEFIGSL--------- 210 (393)
T ss_dssp CHHHHHHHHHHHHHTTSCCEEEECTTTHHHHHHHHHHTTCSEEEEECSSCCSSCCCC-----CHHHHHHHC---------
T ss_pred CHHHHHHHHHHHhhcCCeEEEEeCCccHHHHHHHHHHCCCCEEEEeCCccccccCCCcccHHHHHHHHHhc---------
Confidence 55666667776666677777655544433 345556788888876411 1 122233333322
Q ss_pred CcccccccccCCCCccccccCCCceEEE-EEEccHHHHHHHHHHhccCCccEEEEChhh--HHhhcCCCCCCCCHHHHHH
Q 018508 189 SAHTVVRASGYGIDEGYLSNYEEELLIM-CQVESEEGVKRAEDIAAVDGVDCVQMGPLD--LSASMGYLWDPGHRKVREM 265 (355)
Q Consensus 189 ~g~~~~ra~~~g~~~~y~~~~n~~i~vi-~mIET~~av~nieeIaavpgVD~l~iGp~D--Ls~slG~~~~~~~p~v~~a 265 (355)
.+.++ -.|-|++-...+.+ -|+|+|.+|.+- -..-.|. + +....+
T Consensus 211 -----------------------~~pvi~ggi~t~e~a~~~~~----~Gad~i~vg~Gg~~~~~~~~~-g----~~~~~~ 258 (393)
T 2qr6_A 211 -----------------------DVPVIAGGVNDYTTALHMMR----TGAVGIIVGGGENTNSLALGM-E----VSMATA 258 (393)
T ss_dssp -----------------------SSCEEEECCCSHHHHHHHHT----TTCSEEEESCCSCCHHHHTSC-C----CCHHHH
T ss_pred -----------------------CCCEEECCcCCHHHHHHHHH----cCCCEEEECCCcccccccCCC-C----CChHHH
Confidence 12222 35667665444432 389999997521 1111111 1 123344
Q ss_pred HHHHHHHH----HhCC---Cce--eecccCCchhHHHHHHCCCCEEEecch
Q 018508 266 MRVAEKGV----LGGG---KAY--LAGFAMPHDAPLEMKSRGYHMVSGAVD 307 (355)
Q Consensus 266 i~~iv~aa----~a~g---~~~--~g~~~~d~~~a~~~~~~G~~~vs~~~D 307 (355)
+.++.+++ .+.+ +++ .|++ .+..++.+++.+|.+.+.+|.-
T Consensus 259 l~~v~~~~~~~~~~~~~~~ipvia~GGI-~~~~dv~kalalGA~~V~iG~~ 308 (393)
T 2qr6_A 259 IADVAAARRDYLDETGGRYVHIIADGSI-ENSGDVVKAIACGADAVVLGSP 308 (393)
T ss_dssp HHHHHHHHHHHHHHHTSCCCEEEECSSC-CSHHHHHHHHHHTCSEEEECGG
T ss_pred HHHHHHHHHHhHhhcCCcceEEEEECCC-CCHHHHHHHHHcCCCEEEECHH
Confidence 55555543 1123 332 2333 3567778888999999999865
No 179
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=86.66 E-value=7.7 Score=30.91 Aligned_cols=101 Identities=13% Similarity=0.051 Sum_probs=59.5
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcC-CcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISGLAG-YDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKK 152 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G-~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~ 152 (355)
..+++.|..| . -+..-.+..+..+.+.... +|.|++|++-...+--++...++.. ....++++=....+...+.+
T Consensus 18 ~~l~~~L~~~-~--~v~~~~~~~~a~~~l~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~-~~~~~ii~~s~~~~~~~~~~ 93 (151)
T 3kcn_A 18 NTLKRNLSFD-F--EVTTCESGPEALACIKKSDPFSVIMVDMRMPGMEGTEVIQKARLI-SPNSVYLMLTGNQDLTTAME 93 (151)
T ss_dssp HHHHHHHTTT-S--EEEEESSHHHHHHHHHHSCCCSEEEEESCCSSSCHHHHHHHHHHH-CSSCEEEEEECGGGHHHHHH
T ss_pred HHHHHHhccC-c--eEEEeCCHHHHHHHHHcCCCCCEEEEeCCCCCCcHHHHHHHHHhc-CCCcEEEEEECCCCHHHHHH
Confidence 4567777654 2 2222233344556666554 7999999987655544444444432 23344444444455667888
Q ss_pred HHhcC-CCeEeecCCCCHHHHHHHHHHc
Q 018508 153 ALDLG-PQGVMFPMIDSPEAAKEAVSYC 179 (355)
Q Consensus 153 aLdaG-a~GImvP~Vesaeea~~vv~a~ 179 (355)
++..| +++++. +=-+.+++...++.+
T Consensus 94 ~~~~g~~~~~l~-KP~~~~~L~~~i~~~ 120 (151)
T 3kcn_A 94 AVNEGQVFRFLN-KPCQMSDIKAAINAG 120 (151)
T ss_dssp HHHHTCCSEEEE-SSCCHHHHHHHHHHH
T ss_pred HHHcCCeeEEEc-CCCCHHHHHHHHHHH
Confidence 99999 887653 444778877666544
No 180
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=86.59 E-value=9.7 Score=29.53 Aligned_cols=102 Identities=12% Similarity=0.016 Sum_probs=61.2
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKA 153 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~a 153 (355)
..++..|+.....+ ..-.+..+..+.+....+|.|++|++-...+--++...++.. ....++++=....+.....++
T Consensus 17 ~~l~~~L~~~g~~v--~~~~~~~~al~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~-~~~~~ii~~s~~~~~~~~~~~ 93 (132)
T 3crn_A 17 DSTKQILEFEGYEV--EIAATAGEGLAKIENEFFNLALFXIKLPDMEGTELLEKAHKL-RPGMKKIMVTGYASLENSVFS 93 (132)
T ss_dssp HHHHHHHHHTTCEE--EEESSHHHHHHHHHHSCCSEEEECSBCSSSBHHHHHHHHHHH-CTTSEEEEEESCCCHHHHHHH
T ss_pred HHHHHHHHHCCceE--EEeCCHHHHHHHHhcCCCCEEEEecCCCCCchHHHHHHHHhh-CCCCcEEEEeccccHHHHHHH
Confidence 45667776433322 222333455666777789999999986544433333334332 223444444455566778889
Q ss_pred HhcCCCeEeecCCCCHHHHHHHHHHc
Q 018508 154 LDLGPQGVMFPMIDSPEAAKEAVSYC 179 (355)
Q Consensus 154 LdaGa~GImvP~Vesaeea~~vv~a~ 179 (355)
+..|+++.+. |=-+.+++...++.+
T Consensus 94 ~~~ga~~~l~-KP~~~~~L~~~i~~~ 118 (132)
T 3crn_A 94 LNAGADAYIM-KPVNPRDLLEKIKEK 118 (132)
T ss_dssp HHTTCSEEEE-SSCCHHHHHHHHHHH
T ss_pred Hhccchhhcc-CCCCHHHHHHHHHHH
Confidence 9999998753 334678887766654
No 181
>1a04_A Nitrate/nitrite response regulator protein NARL; signal transduction protein, response regulators, two- component systems; 2.20A {Escherichia coli} SCOP: a.4.6.2 c.23.1.1 PDB: 1rnl_A
Probab=86.55 E-value=12 Score=31.81 Aligned_cols=103 Identities=14% Similarity=0.026 Sum_probs=60.7
Q ss_pred hHHHHHHHcCCcEEEE-EEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHH
Q 018508 74 ESLKYRLQSNETLYGL-FLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKK 152 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl-~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~ 152 (355)
..+++.|.... -+-. ..-.+..+..+.+....+|.|++|+.-...+--++...++.. ....+++|=....+...+..
T Consensus 19 ~~l~~~L~~~~-~~~vv~~~~~~~~al~~~~~~~~dlvllD~~lp~~~g~~~~~~lr~~-~~~~~ii~ls~~~~~~~~~~ 96 (215)
T 1a04_A 19 TGVKQLISMAP-DITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGLETLDKLREK-SLSGRIVVFSVSNHEEDVVT 96 (215)
T ss_dssp HHHHHHHTTCT-TEEEEEEESSHHHHHHHHHHHCCSEEEEETTSTTSCHHHHHHHHHHS-CCCSEEEEEECCCCHHHHHH
T ss_pred HHHHHHHhcCC-CcEEEEEeCCHHHHHHHHHhcCCCEEEEeCCCCCCcHHHHHHHHHHh-CCCCcEEEEECCCCHHHHHH
Confidence 34566665421 1222 222233445667777789999999986544433333333321 12334444444556777889
Q ss_pred HHhcCCCeEeecCCCCHHHHHHHHHHc
Q 018508 153 ALDLGPQGVMFPMIDSPEAAKEAVSYC 179 (355)
Q Consensus 153 aLdaGa~GImvP~Vesaeea~~vv~a~ 179 (355)
+++.|+++++ +|--+.+++...++.+
T Consensus 97 ~~~~Ga~~~l-~Kp~~~~~L~~~i~~~ 122 (215)
T 1a04_A 97 ALKRGADGYL-LKDMEPEDLLKALHQA 122 (215)
T ss_dssp HHHTTCSEEE-ETTCCHHHHHHHHHHH
T ss_pred HHHcCCcEEE-eCCCCHHHHHHHHHHH
Confidence 9999999875 4555788887777665
No 182
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=86.46 E-value=9.7 Score=29.87 Aligned_cols=102 Identities=11% Similarity=0.083 Sum_probs=60.7
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKA 153 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~a 153 (355)
..+++.|......+ ..-.+..+..+.+....+|.|++|+.-...+--++...++.. ....++++=....+......+
T Consensus 18 ~~l~~~L~~~g~~v--~~~~~~~~a~~~l~~~~~dlvllD~~l~~~~g~~l~~~l~~~-~~~~~ii~ls~~~~~~~~~~~ 94 (137)
T 3cfy_A 18 ILYKQYVKDEPYDI--FHVETGRDAIQFIERSKPQLIILDLKLPDMSGEDVLDWINQN-DIPTSVIIATAHGSVDLAVNL 94 (137)
T ss_dssp HHHHHHTTTSSSEE--EEESSHHHHHHHHHHHCCSEEEECSBCSSSBHHHHHHHHHHT-TCCCEEEEEESSCCHHHHHHH
T ss_pred HHHHHHHHhcCceE--EEeCCHHHHHHHHHhcCCCEEEEecCCCCCCHHHHHHHHHhc-CCCCCEEEEEecCcHHHHHHH
Confidence 45666676433322 222333456667777789999999976544433333333321 123344444445566778889
Q ss_pred HhcCCCeEeecCCCCHHHHHHHHHHc
Q 018508 154 LDLGPQGVMFPMIDSPEAAKEAVSYC 179 (355)
Q Consensus 154 LdaGa~GImvP~Vesaeea~~vv~a~ 179 (355)
++.|+++++ +|=-+.+++...++.+
T Consensus 95 ~~~ga~~~l-~KP~~~~~L~~~i~~~ 119 (137)
T 3cfy_A 95 IQKGAEDFL-EKPINADRLKTSVALH 119 (137)
T ss_dssp HHTTCSEEE-ESSCCHHHHHHHHHHH
T ss_pred HHCCccEEE-eCCCCHHHHHHHHHHH
Confidence 999999865 4445678887766554
No 183
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=86.33 E-value=2.8 Score=37.53 Aligned_cols=83 Identities=17% Similarity=0.059 Sum_probs=48.9
Q ss_pred CH-HHHHHhhhcCCcEEEEeCCCCCC-CHHHHHHHHHHHH-hCCCCeEEcCCCCCHHHHHHHHhcCCCeEeecC--CCCH
Q 018508 95 SP-TLAEISGLAGYDFVVVDMEHGPG-GISDALACLHALA-ATGTPAILRLPESCPTWAKKALDLGPQGVMFPM--IDSP 169 (355)
Q Consensus 95 sp-~~~e~aa~~G~D~vilDlEh~~~-~~~~a~~~i~a~~-~~g~~~iVRV~~~~~~~i~~aLdaGa~GImvP~--Vesa 169 (355)
+| +.++.+...|+|++-++-.++.+ ..... ..++.+. ..+.+++|=-.-.++..+..++++|+++|++-. ..++
T Consensus 33 d~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~-~~i~~i~~~~~ipv~v~ggI~~~~~~~~~l~~Gad~V~lg~~~l~~p 111 (244)
T 1vzw_A 33 SPLEAALAWQRSGAEWLHLVDLDAAFGTGDNR-ALIAEVAQAMDIKVELSGGIRDDDTLAAALATGCTRVNLGTAALETP 111 (244)
T ss_dssp CHHHHHHHHHHTTCSEEEEEEHHHHHTSCCCH-HHHHHHHHHCSSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHHCH
T ss_pred CHHHHHHHHHHcCCCEEEEecCchhhcCCChH-HHHHHHHHhcCCcEEEECCcCCHHHHHHHHHcCCCEEEECchHhhCH
Confidence 44 45677788999999887544311 00111 3344432 345555553222357789999999999988742 2345
Q ss_pred HHHHHHHHH
Q 018508 170 EAAKEAVSY 178 (355)
Q Consensus 170 eea~~vv~a 178 (355)
+.+.++++.
T Consensus 112 ~~~~~~~~~ 120 (244)
T 1vzw_A 112 EWVAKVIAE 120 (244)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 555555554
No 184
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=86.29 E-value=4.6 Score=32.22 Aligned_cols=103 Identities=17% Similarity=0.167 Sum_probs=53.4
Q ss_pred hHHHHHHHc--CCcEEEEEEecCCHHHHHHhhh-cCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHH
Q 018508 74 ESLKYRLQS--NETLYGLFLLSFSPTLAEISGL-AGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWA 150 (355)
Q Consensus 74 n~lk~~L~~--G~~~~gl~v~~~sp~~~e~aa~-~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i 150 (355)
..+++.|.. |-..+. ...+..+..+.+.. ..+|.|++|++-...+--++...++.. ....++++=....+...+
T Consensus 17 ~~l~~~L~~~~g~~~v~--~~~~~~~a~~~l~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~-~~~~~ii~ls~~~~~~~~ 93 (154)
T 2qsj_A 17 AGAKNLLEGAFSGMRVE--GAETVSDALAFLEADNTVDLILLDVNLPDAEAIDGLVRLKRF-DPSNAVALISGETDHELI 93 (154)
T ss_dssp HHHHHHHHHHCTTEEEE--EESSHHHHHHHHHTTCCCSEEEECC------CHHHHHHHHHH-CTTSEEEEC-----CHHH
T ss_pred HHHHHHHHhCCCceEEE--EecCHHHHHHHHhccCCCCEEEEeCCCCCCchHHHHHHHHHh-CCCCeEEEEeCCCCHHHH
Confidence 346666654 221222 22233445566666 779999999986432222222223321 223444544444455678
Q ss_pred HHHHhcCCCeEeecCCCCHHHHHHHHHHcC
Q 018508 151 KKALDLGPQGVMFPMIDSPEAAKEAVSYCR 180 (355)
Q Consensus 151 ~~aLdaGa~GImvP~Vesaeea~~vv~a~~ 180 (355)
..++..|+++++ ++--+.+++...++.+.
T Consensus 94 ~~~~~~g~~~~l-~kp~~~~~L~~~l~~~~ 122 (154)
T 2qsj_A 94 RAALEAGADGFI-PKSADPQVLIHAVSLIL 122 (154)
T ss_dssp HHHHHTTCCBBC-CTTSCHHHHHHHHHHHH
T ss_pred HHHHHccCCEEE-eCCCCHHHHHHHHHHHH
Confidence 889999999865 44457888877776653
No 185
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=86.29 E-value=7.2 Score=39.18 Aligned_cols=64 Identities=22% Similarity=0.275 Sum_probs=46.0
Q ss_pred HHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHh-C-CCCeEE-cCCCCCHHHHHHHHhcCCCeEee
Q 018508 96 PTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAA-T-GTPAIL-RLPESCPTWAKKALDLGPQGVMF 163 (355)
Q Consensus 96 p~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~-~-g~~~iV-RV~~~~~~~i~~aLdaGa~GImv 163 (355)
.+.++.+...|+|+|.||.-|+.. ....+.++.++. . +.++++ .| .....++++.++|+++|.+
T Consensus 257 ~~~a~~~~~aG~d~v~i~~~~G~~--~~~~~~i~~i~~~~~~~pvi~~~v--~t~~~a~~l~~aGad~I~v 323 (514)
T 1jcn_A 257 KYRLDLLTQAGVDVIVLDSSQGNS--VYQIAMVHYIKQKYPHLQVIGGNV--VTAAQAKNLIDAGVDGLRV 323 (514)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCCS--HHHHHHHHHHHHHCTTCEEEEEEE--CSHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEeeccCCcc--hhHHHHHHHHHHhCCCCceEeccc--chHHHHHHHHHcCCCEEEE
Confidence 456677888999999999998743 233455555543 2 566665 34 4567789999999999988
No 186
>1zh2_A KDP operon transcriptional regulatory protein KDPE; two-component system, gene regulation, transcription factor, KDP potassium transport system; 2.00A {Escherichia coli} SCOP: c.23.1.1 PDB: 1zh4_A
Probab=86.23 E-value=8.9 Score=28.77 Aligned_cols=101 Identities=14% Similarity=0.066 Sum_probs=59.4
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKA 153 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~a 153 (355)
..+++.|......+ ....+..+..+.+....+|.+++|++-...+--++...++ .....++++=....+.....++
T Consensus 15 ~~l~~~l~~~~~~v--~~~~~~~~~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~--~~~~~~ii~~s~~~~~~~~~~~ 90 (121)
T 1zh2_A 15 RFLRTALEGDGMRV--FEAETLQRGLLEAATRKPDLIILDLGLPDGDGIEFIRDLR--QWSAVPVIVLSARSEESDKIAA 90 (121)
T ss_dssp HHHHHHHHTTTCEE--EEESSHHHHHHHHHHHCCSEEEEESEETTEEHHHHHHHHH--TTCCCCEEEEESCCSHHHHHHH
T ss_pred HHHHHHHhcCCCEE--EEeCCHHHHHHHHhcCCCCEEEEeCCCCCCcHHHHHHHHH--hCCCCcEEEEECCCCHHHHHHH
Confidence 34666776533322 2222334455556666799999999865433223333333 1233444544455566678889
Q ss_pred HhcCCCeEeecCCCCHHHHHHHHHHc
Q 018508 154 LDLGPQGVMFPMIDSPEAAKEAVSYC 179 (355)
Q Consensus 154 LdaGa~GImvP~Vesaeea~~vv~a~ 179 (355)
++.|+++++ +|--+.+++...++.+
T Consensus 91 ~~~g~~~~l-~Kp~~~~~l~~~i~~~ 115 (121)
T 1zh2_A 91 LDAGADDYL-SKPFGIGELQARLRVA 115 (121)
T ss_dssp HHHTCSEEE-ESSCCHHHHHHHHHHH
T ss_pred HhcCCCeEE-eCCcCHHHHHHHHHHH
Confidence 999998865 4445688887766554
No 187
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=86.21 E-value=9 Score=28.97 Aligned_cols=103 Identities=9% Similarity=-0.048 Sum_probs=57.0
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHh-CCCCeEEcCCCCCHHHHHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAA-TGTPAILRLPESCPTWAKK 152 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~-~g~~~iVRV~~~~~~~i~~ 152 (355)
..+++.|..-...+ ....+..+..+.+....+|.|++|+.-...+--++...++.... ...++++=....+.....+
T Consensus 15 ~~l~~~L~~~~~~v--~~~~~~~~a~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~ 92 (124)
T 1mb3_A 15 KLFHDLLEAQGYET--LQTREGLSALSIARENKPDLILMDIQLPEISGLEVTKWLKEDDDLAHIPVVAVTAFAMKGDEER 92 (124)
T ss_dssp HHHHHHHHHTTCEE--EEESCHHHHHHHHHHHCCSEEEEESBCSSSBHHHHHHHHHHSTTTTTSCEEEEC------CHHH
T ss_pred HHHHHHHHHcCcEE--EEeCCHHHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHcCccccCCcEEEEECCCCHHHHHH
Confidence 44666676433222 22223344556666778999999998754443333333433211 2344454444444555778
Q ss_pred HHhcCCCeEeecCCCCHHHHHHHHHHc
Q 018508 153 ALDLGPQGVMFPMIDSPEAAKEAVSYC 179 (355)
Q Consensus 153 aLdaGa~GImvP~Vesaeea~~vv~a~ 179 (355)
++..|+++++ +|--+.+++...++.+
T Consensus 93 ~~~~g~~~~l-~KP~~~~~l~~~i~~~ 118 (124)
T 1mb3_A 93 IREGGCEAYI-SKPISVVHFLETIKRL 118 (124)
T ss_dssp HHHHTCSEEE-CSSCCHHHHHHHHHHH
T ss_pred HHhCCCCEEE-eCCCCHHHHHHHHHHH
Confidence 8999999875 4445788887776654
No 188
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=86.20 E-value=6.2 Score=37.32 Aligned_cols=127 Identities=13% Similarity=0.056 Sum_probs=78.7
Q ss_pred HHHHHhhhcCCcEEE----EeCCCCC-CCHHHHHHHHHHHHhCCCCeEEc-------CCC-CCH-HH----HHHHHhcCC
Q 018508 97 TLAEISGLAGYDFVV----VDMEHGP-GGISDALACLHALAATGTPAILR-------LPE-SCP-TW----AKKALDLGP 158 (355)
Q Consensus 97 ~~~e~aa~~G~D~vi----lDlEh~~-~~~~~a~~~i~a~~~~g~~~iVR-------V~~-~~~-~~----i~~aLdaGa 158 (355)
..+|.+...|+|+|- ++-++.. ...+++.++...++..|.+.+|= +.. .++ .. ++.+.+.|+
T Consensus 112 ~~ve~a~~~GAdaV~vlv~~~~d~~~~~~~~~i~~v~~~~~~~G~p~lv~~~~~g~~v~~~~~~~~~v~~aa~~a~~lGa 191 (304)
T 1to3_A 112 INAQAVKRDGAKALKLLVLWRSDEDAQQRLNMVKEFNELCHSNGLLSIIEPVVRPPRCGDKFDREQAIIDAAKELGDSGA 191 (304)
T ss_dssp CCHHHHHHTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHTTTCEEEEEEEECCCSSCSCCCHHHHHHHHHHHHTTSSC
T ss_pred hhHHHHHHcCCCEEEEEEEcCCCccHHHHHHHHHHHHHHHHHcCCcEEEEEECCCCccccCCChhHHHHHHHHHHHHcCC
Confidence 457888899999986 7754422 12234445566677788775432 211 233 32 456677899
Q ss_pred CeEeecCC----CCHHHHHHHHHH----cCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEEccHHHHHHHHH
Q 018508 159 QGVMFPMI----DSPEAAKEAVSY----CRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKRAED 230 (355)
Q Consensus 159 ~GImvP~V----esaeea~~vv~a----~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mIET~~av~niee 230 (355)
|-|-++.. .+.++++++++. |.-| | +.+..-|-..+-++++.+
T Consensus 192 D~iKv~~~~~~~g~~~~~~~vv~~~~~~~~~P----------------~-------------Vv~aGG~~~~~~~~~~~~ 242 (304)
T 1to3_A 192 DLYKVEMPLYGKGARSDLLTASQRLNGHINMP----------------W-------------VILSSGVDEKLFPRAVRV 242 (304)
T ss_dssp SEEEECCGGGGCSCHHHHHHHHHHHHHTCCSC----------------E-------------EECCTTSCTTTHHHHHHH
T ss_pred CEEEeCCCcCCCCCHHHHHHHHHhccccCCCC----------------e-------------EEEecCCCHHHHHHHHHH
Confidence 98877774 578898888887 4321 0 000011112234567777
Q ss_pred HhccCCccEEEEChhhHHhhcCC
Q 018508 231 IAAVDGVDCVQMGPLDLSASMGY 253 (355)
Q Consensus 231 IaavpgVD~l~iGp~DLs~slG~ 253 (355)
.... |+++|.+|.+=+...++.
T Consensus 243 a~~a-Ga~Gv~vGRaI~q~~~~~ 264 (304)
T 1to3_A 243 AMEA-GASGFLAGRAVWSSVIGL 264 (304)
T ss_dssp HHHT-TCCEEEESHHHHGGGTTC
T ss_pred HHHc-CCeEEEEehHHhCccccC
Confidence 7754 899999999988776654
No 189
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=85.99 E-value=9.9 Score=29.06 Aligned_cols=102 Identities=16% Similarity=0.095 Sum_probs=61.5
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKA 153 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~a 153 (355)
..++..|......+. ...+..+..+.+....+|.|++|++-...+--+....++.. ....++++=....+.....++
T Consensus 17 ~~l~~~l~~~~~~v~--~~~~~~~~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~-~~~~~ii~~s~~~~~~~~~~~ 93 (126)
T 1dbw_A 17 KSLAFMLTMNGFAVK--MHQSAEAFLAFAPDVRNGVLVTDLRMPDMSGVELLRNLGDL-KINIPSIVITGHGDVPMAVEA 93 (126)
T ss_dssp HHHHHHHHHTTCEEE--EESCHHHHHHHGGGCCSEEEEEECCSTTSCHHHHHHHHHHT-TCCCCEEEEECTTCHHHHHHH
T ss_pred HHHHHHHHhCCcEEE--EeCCHHHHHHHHhcCCCCEEEEECCCCCCCHHHHHHHHHhc-CCCCCEEEEECCCCHHHHHHH
Confidence 446666764333222 22233445566667779999999986544433333333331 123445554455566778899
Q ss_pred HhcCCCeEeecCCCCHHHHHHHHHHc
Q 018508 154 LDLGPQGVMFPMIDSPEAAKEAVSYC 179 (355)
Q Consensus 154 LdaGa~GImvP~Vesaeea~~vv~a~ 179 (355)
++.|+++.+ +|--+.+++...++.+
T Consensus 94 ~~~ga~~~l-~Kp~~~~~l~~~i~~~ 118 (126)
T 1dbw_A 94 MKAGAVDFI-EKPFEDTVIIEAIERA 118 (126)
T ss_dssp HHTTCSEEE-ESSCCHHHHHHHHHHH
T ss_pred HHhCHHHhe-eCCCCHHHHHHHHHHH
Confidence 999999865 4445788887777655
No 190
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=85.93 E-value=5.1 Score=40.59 Aligned_cols=175 Identities=13% Similarity=0.065 Sum_probs=94.3
Q ss_pred HHHHHhhhcCCcE-EEEeCCCCC---CCHHHHHHHHHHHH-----hCCCCeEEcCCCC--CHHHHHHHHhcCCCeEeecC
Q 018508 97 TLAEISGLAGYDF-VVVDMEHGP---GGISDALACLHALA-----ATGTPAILRLPES--CPTWAKKALDLGPQGVMFPM 165 (355)
Q Consensus 97 ~~~e~aa~~G~D~-vilDlEh~~---~~~~~a~~~i~a~~-----~~g~~~iVRV~~~--~~~~i~~aLdaGa~GImvP~ 165 (355)
+..+.+...+... .++|-+... ....++.+.+..-. .....+.+-+... ....+..++++|++.|.+=.
T Consensus 197 eal~~m~~~~i~~lpVVDe~g~l~GiIT~~Dil~~~~~p~a~~D~~~rl~V~aavg~~~d~~era~aLveaGvd~I~Id~ 276 (511)
T 3usb_A 197 EAEKILQKYKIEKLPLVDNNGVLQGLITIKDIEKVIEFPNSAKDKQGRLLVGAAVGVTADAMTRIDALVKASVDAIVLDT 276 (511)
T ss_dssp HHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHCTTCCBCTTSCBCCEEEECSSTTHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHcCCCEEEEEeCCCCEeeeccHHHHHHhhhcccchhhhccceeeeeeeeeccchHHHHHHHHhhccceEEecc
Confidence 3556666777765 556644332 23343333322100 0111222333222 23457788999999888732
Q ss_pred CC-CHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEEccHHHHHHHHHHhccCCccEEEECh
Q 018508 166 ID-SPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKRAEDIAAVDGVDCVQMGP 244 (355)
Q Consensus 166 Ve-saeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mIET~~av~nieeIaavpgVD~l~iGp 244 (355)
.+ ..+.+.++++.++.. | .+...++..|-|.+....+.+. |+|+|.+|.
T Consensus 277 a~g~~~~v~~~i~~i~~~----------------~----------~~~~vi~g~v~t~e~a~~~~~a----Gad~i~vg~ 326 (511)
T 3usb_A 277 AHGHSQGVIDKVKEVRAK----------------Y----------PSLNIIAGNVATAEATKALIEA----GANVVKVGI 326 (511)
T ss_dssp SCTTSHHHHHHHHHHHHH----------------C----------TTSEEEEEEECSHHHHHHHHHH----TCSEEEECS
T ss_pred cccchhhhhhHHHHHHHh----------------C----------CCceEEeeeeccHHHHHHHHHh----CCCEEEECC
Confidence 22 223444445444310 0 1123444578888877666552 789998753
Q ss_pred hh----HHhh-cCCCCCCCCHHHHHHHHHHHHHHHhCCCcee--ecccCCchhHHHHHHCCCCEEEecch
Q 018508 245 LD----LSAS-MGYLWDPGHRKVREMMRVAEKGVLGGGKAYL--AGFAMPHDAPLEMKSRGYHMVSGAVD 307 (355)
Q Consensus 245 ~D----Ls~s-lG~~~~~~~p~v~~ai~~iv~aa~a~g~~~~--g~~~~d~~~a~~~~~~G~~~vs~~~D 307 (355)
.- .... .| ...|.+ .++..+.+++++.+++++ ||+ .++.++.+++++|.+.+.+|+=
T Consensus 327 g~gsi~~~~~~~g----~g~p~~-~~l~~v~~~~~~~~iPVIa~GGI-~~~~di~kala~GA~~V~vGs~ 390 (511)
T 3usb_A 327 GPGSICTTRVVAG----VGVPQL-TAVYDCATEARKHGIPVIADGGI-KYSGDMVKALAAGAHVVMLGSM 390 (511)
T ss_dssp SCSTTCCHHHHHC----CCCCHH-HHHHHHHHHHHTTTCCEEEESCC-CSHHHHHHHHHTTCSEEEESTT
T ss_pred CCccccccccccC----CCCCcH-HHHHHHHHHHHhCCCcEEEeCCC-CCHHHHHHHHHhCchhheecHH
Confidence 21 1111 12 112333 556677777777777754 344 4677788888999999999963
No 191
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=85.68 E-value=8.5 Score=35.44 Aligned_cols=181 Identities=16% Similarity=0.062 Sum_probs=94.3
Q ss_pred HHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCH-----------HHHHHHHhcCCCeEee-c-
Q 018508 98 LAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCP-----------TWAKKALDLGPQGVMF-P- 164 (355)
Q Consensus 98 ~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~-----------~~i~~aLdaGa~GImv-P- 164 (355)
.++.+...|++.|+++. ..+.... ..+...+|+++.... ..+.++++.|++.|-+ -
T Consensus 46 ~~~~a~~~~~~av~v~~-------~~v~~~~----~~~~~liv~~~~~~~~~g~~~~~~~~~~ve~Ai~~Ga~~v~~~~n 114 (263)
T 1w8s_A 46 ILRLARDAGFDGVVFQR-------GIAEKYY----DGSVPLILKLNGKTTLYNGEPVSVANCSVEEAVSLGASAVGYTIY 114 (263)
T ss_dssp HHHHHHHHTCSEEEECH-------HHHHHHC----CSSSCEEEECEECCTTCCSSCCCEESSCHHHHHHTTCSEEEEEEC
T ss_pred HHHHHHhhCCCEEEECH-------HHHHHhh----cCCCcEEEEEeCCCCcCCCCccchHHHHHHHHHHCCCCEEEEEEe
Confidence 56777788888888761 1111111 344666777644321 2378899999998643 2
Q ss_pred -CCCCH----HHHHHHHHHcCCCCCCCCCCcccccccccCCCC---ccccccCCCceEEEEEEccHHHHHHHHHHhccCC
Q 018508 165 -MIDSP----EAAKEAVSYCRFPPSGVRGSAHTVVRASGYGID---EGYLSNYEEELLIMCQVESEEGVKRAEDIAAVDG 236 (355)
Q Consensus 165 -~Vesa----eea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~---~~y~~~~n~~i~vi~mIET~~av~nieeIaavpg 236 (355)
.-.+. ++++++++.|+. ||.. ..|+.. .++ .+--|++-+..+-+++.--|
T Consensus 115 ig~~~~~~~~~~~~~v~~~~~~-----------------~~~~vIi~~~~~G--~~~---~~~~s~~~i~~a~~~a~~~G 172 (263)
T 1w8s_A 115 PGSGFEWKMFEELARIKRDAVK-----------------FDLPLVVESFPRG--GKV---VNETAPEIVAYAARIALELG 172 (263)
T ss_dssp TTSTTHHHHHHHHHHHHHHHHH-----------------HTCCEEEEECCCS--TTC---CCTTCHHHHHHHHHHHHHHT
T ss_pred cCCcCHHHHHHHHHHHHHHHHH-----------------cCCeEEEEeeCCC--Ccc---ccCCCHHHHHHHHHHHHHcC
Confidence 33333 334555555531 1110 011100 000 00015666666656665568
Q ss_pred ccEEEEChhhHHhhcCCCCCCCCHHHHHHHHHHHHHHHhCCCceeecccC-CchhH----HHHHHCCCCEEEecchHHHH
Q 018508 237 VDCVQMGPLDLSASMGYLWDPGHRKVREMMRVAEKGVLGGGKAYLAGFAM-PHDAP----LEMKSRGYHMVSGAVDVGLF 311 (355)
Q Consensus 237 VD~l~iGp~DLs~slG~~~~~~~p~v~~ai~~iv~aa~a~g~~~~g~~~~-d~~~a----~~~~~~G~~~vs~~~D~~ll 311 (355)
.|+|=+|.. + .+ +.++++.+.+....++..||+.. +.+++ ...++.|.++++++..+.-=
T Consensus 173 AD~vkt~~~---------~---~~---e~~~~~~~~~~~~pV~asGGi~~~~~~~~l~~i~~~~~aGA~GvsvgraI~~~ 237 (263)
T 1w8s_A 173 ADAMKIKYT---------G---DP---KTFSWAVKVAGKVPVLMSGGPKTKTEEDFLKQVEGVLEAGALGIAVGRNVWQR 237 (263)
T ss_dssp CSEEEEECC---------S---SH---HHHHHHHHHTTTSCEEEECCSCCSSHHHHHHHHHHHHHTTCCEEEESHHHHTS
T ss_pred CCEEEEcCC---------C---CH---HHHHHHHHhCCCCeEEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEehhhcCC
Confidence 999888731 1 22 33445555552114556777764 34444 34458999999998765321
Q ss_pred HHHHHHHHHHHHHhcC
Q 018508 312 RSAAVEDVARFKMNLT 327 (355)
Q Consensus 312 ~~~~~~~~~~~r~~~~ 327 (355)
.--.+.+++++....
T Consensus 238 -~dp~~~~~~l~~~v~ 252 (263)
T 1w8s_A 238 -RDALKFARALAELVY 252 (263)
T ss_dssp -TTHHHHHHHHHHHHC
T ss_pred -cCHHHHHHHHHHHHh
Confidence 112344455555444
No 192
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=85.65 E-value=12 Score=34.95 Aligned_cols=67 Identities=12% Similarity=0.008 Sum_probs=53.5
Q ss_pred cCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHHHhcCCCeEee
Q 018508 93 SFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMF 163 (355)
Q Consensus 93 ~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~aLdaGa~GImv 163 (355)
+-+|.-+..+...|+|.|+|-.. ..+.+++..++..+..-|..++|=|. +...+.++++.|+.-|-|
T Consensus 113 iid~yQI~eAr~~GADaILLI~a--~L~~~~l~~l~~~A~~lGl~~LvEVh--~~~El~rAl~~~a~iIGI 179 (258)
T 4a29_A 113 IVKESQIDDAYNLGADTVLLIVK--ILTERELESLLEYARSYGMEPLILIN--DENDLDIALRIGARFIGI 179 (258)
T ss_dssp CCSHHHHHHHHHHTCSEEEEEGG--GSCHHHHHHHHHHHHHTTCCCEEEES--SHHHHHHHHHTTCSEEEE
T ss_pred cccHHHHHHHHHcCCCeeehHHh--hcCHHHHHHHHHHHHHHhHHHHHhcc--hHHHHHHHhcCCCcEEEE
Confidence 34777777788889999998774 46778888888888888999999876 467799999999975543
No 193
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=85.58 E-value=2.7 Score=39.89 Aligned_cols=119 Identities=14% Similarity=0.131 Sum_probs=75.2
Q ss_pred HHHHhhhcCCcEEEEeCCCCCCCHH----HHHHHHHHHHhCCCCeEEcCCC-----CCHHH----HHHHHhcCCCeEeec
Q 018508 98 LAEISGLAGYDFVVVDMEHGPGGIS----DALACLHALAATGTPAILRLPE-----SCPTW----AKKALDLGPQGVMFP 164 (355)
Q Consensus 98 ~~e~aa~~G~D~vilDlEh~~~~~~----~a~~~i~a~~~~g~~~iVRV~~-----~~~~~----i~~aLdaGa~GImvP 164 (355)
.+|.+...|+|.|-+..--+..... ++.+++..+...|.++++=.+. .++.. .+.+.++||+.|-+|
T Consensus 130 ~ve~Av~~GAdaV~~~i~~Gs~~~~~~l~~i~~v~~~a~~~GlpvIie~~~G~~~~~d~e~i~~aariA~elGAD~VKt~ 209 (295)
T 3glc_A 130 SMDDAVRLNSCAVAAQVYIGSEYEHQSIKNIIQLVDAGMKVGMPTMAVTGVGKDMVRDQRYFSLATRIAAEMGAQIIKTY 209 (295)
T ss_dssp CHHHHHHTTCSEEEEEECTTSTTHHHHHHHHHHHHHHHHTTTCCEEEEECC----CCSHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHCCCCEEEEEEECCCCcHHHHHHHHHHHHHHHHHcCCEEEEECCCCCccCCCHHHHHHHHHHHHHhCCCEEEeC
Confidence 4788889999998887766643322 2334555666678887762111 24442 345778999999999
Q ss_pred CCCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEEccHHHHHHHHHHhccCCccEEEECh
Q 018508 165 MIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKRAEDIAAVDGVDCVQMGP 244 (355)
Q Consensus 165 ~Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mIET~~av~nieeIaavpgVD~l~iGp 244 (355)
.. .+..+++++.+.-| .-. .| | ....+.+.++++.+.... |.+++.+|.
T Consensus 210 ~t--~e~~~~vv~~~~vP-Vv~--~G---------G----------------~~~~~~~~l~~v~~ai~a-GA~Gv~vGR 258 (295)
T 3glc_A 210 YV--EKGFERIVAGCPVP-IVI--AG---------G----------------KKLPEREALEMCWQAIDQ-GASGVDMGR 258 (295)
T ss_dssp CC--TTTHHHHHHTCSSC-EEE--EC---------C----------------SCCCHHHHHHHHHHHHHT-TCSEEEESH
T ss_pred CC--HHHHHHHHHhCCCc-EEE--EE---------C----------------CCCCHHHHHHHHHHHHHh-CCeEEEeHH
Confidence 75 35567777766421 100 00 0 001356788888777754 899999999
Q ss_pred hhH
Q 018508 245 LDL 247 (355)
Q Consensus 245 ~DL 247 (355)
|=+
T Consensus 259 nI~ 261 (295)
T 3glc_A 259 NIF 261 (295)
T ss_dssp HHH
T ss_pred HHh
Confidence 844
No 194
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=85.52 E-value=4.3 Score=40.97 Aligned_cols=125 Identities=18% Similarity=0.118 Sum_probs=73.7
Q ss_pred CHHHHHHHHhcCCCeEeecCC--CCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEEccHH
Q 018508 146 CPTWAKKALDLGPQGVMFPMI--DSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEE 223 (355)
Q Consensus 146 ~~~~i~~aLdaGa~GImvP~V--esaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mIET~~ 223 (355)
....+.+++++|++.|.+=.. ++ +.+.+.++.++.. | .+-..++..+-|++
T Consensus 232 ~~~~a~~l~~aG~d~I~id~a~g~~-~~~~~~i~~ir~~----------------~----------p~~~Vi~g~v~t~e 284 (496)
T 4fxs_A 232 NEERVKALVEAGVDVLLIDSSHGHS-EGVLQRIRETRAA----------------Y----------PHLEIIGGNVATAE 284 (496)
T ss_dssp CHHHHHHHHHTTCSEEEEECSCTTS-HHHHHHHHHHHHH----------------C----------TTCCEEEEEECSHH
T ss_pred hHHHHHHHHhccCceEEeccccccc-hHHHHHHHHHHHH----------------C----------CCceEEEcccCcHH
Confidence 456688899999998876322 22 3333334333210 0 01123345688888
Q ss_pred HHHHHHHHhccCCccEEEEChhh----HHhh-cCCCCCCCCHHHHHHHHHHHHHHHhCCCceee--cccCCchhHHHHHH
Q 018508 224 GVKRAEDIAAVDGVDCVQMGPLD----LSAS-MGYLWDPGHRKVREMMRVAEKGVLGGGKAYLA--GFAMPHDAPLEMKS 296 (355)
Q Consensus 224 av~nieeIaavpgVD~l~iGp~D----Ls~s-lG~~~~~~~p~v~~ai~~iv~aa~a~g~~~~g--~~~~d~~~a~~~~~ 296 (355)
....+.+. |+|+|.+|-.. .+.. .|. ..| -..++.++.+++++.++++++ |+ .++.++..+++
T Consensus 285 ~a~~l~~a----GaD~I~Vg~g~Gs~~~tr~~~g~----g~p-~~~~i~~v~~~~~~~~iPVIa~GGI-~~~~di~kala 354 (496)
T 4fxs_A 285 GARALIEA----GVSAVKVGIGPGSICTTRIVTGV----GVP-QITAIADAAGVANEYGIPVIADGGI-RFSGDISKAIA 354 (496)
T ss_dssp HHHHHHHH----TCSEEEECSSCCTTBCHHHHHCC----CCC-HHHHHHHHHHHHGGGTCCEEEESCC-CSHHHHHHHHH
T ss_pred HHHHHHHh----CCCEEEECCCCCcCcccccccCC----Ccc-HHHHHHHHHHHhccCCCeEEEeCCC-CCHHHHHHHHH
Confidence 77666542 79999986321 1111 121 122 235667777777777777533 33 46778888889
Q ss_pred CCCCEEEecch
Q 018508 297 RGYHMVSGAVD 307 (355)
Q Consensus 297 ~G~~~vs~~~D 307 (355)
+|.+++.+|+=
T Consensus 355 ~GAd~V~iGs~ 365 (496)
T 4fxs_A 355 AGASCVMVGSM 365 (496)
T ss_dssp TTCSEEEESTT
T ss_pred cCCCeEEecHH
Confidence 99999999953
No 195
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=85.52 E-value=25 Score=33.18 Aligned_cols=186 Identities=13% Similarity=0.033 Sum_probs=110.6
Q ss_pred CchHHHHHHHcCCcEEEEEE-ecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhC-CCCeEEcCC--CCC-
Q 018508 72 SPESLKYRLQSNETLYGLFL-LSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAAT-GTPAILRLP--ESC- 146 (355)
Q Consensus 72 ~~n~lk~~L~~G~~~~gl~v-~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~-g~~~iVRV~--~~~- 146 (355)
..++|.+.|.-.-|++.-=+ ...+++.+..+...|.-.++. . ...+.+++++.++.++.. ..+..|-+. ..+
T Consensus 15 ~~t~~~~~l~~~~Pii~apM~gvs~~~la~av~~aGglG~i~-~--~~~~~~~l~~~i~~i~~~~~~p~gVnl~~~~~~~ 91 (326)
T 3bo9_A 15 VRTRVTDLLEIEHPILMGGMAWAGTPTLAAAVSEAGGLGIIG-S--GAMKPDDLRKAISELRQKTDKPFGVNIILVSPWA 91 (326)
T ss_dssp CCCHHHHHHTCSSSEEECCCTTTSCHHHHHHHHHTTSBEEEE-C--TTCCHHHHHHHHHHHHTTCSSCEEEEEETTSTTH
T ss_pred ecchhHHhcCCCCCEEECCCCCCCCHHHHHHHHhCCCcEEeC-C--CCCCHHHHHHHHHHHHHhcCCCEEEEEeccCCCH
Confidence 34678888876667654322 357889998888888755553 2 234677778777776542 233333322 222
Q ss_pred HHHHHHHHhcCCCeEeecCCCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEEccHHHHH
Q 018508 147 PTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVK 226 (355)
Q Consensus 147 ~~~i~~aLdaGa~GImvP~Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mIET~~av~ 226 (355)
...+..+++.|++.|.+..-...+.+ +.++.. .+.+++.|-+++-+.
T Consensus 92 ~~~~~~~~~~g~d~V~l~~g~p~~~~----~~l~~~-----------------------------g~~v~~~v~s~~~a~ 138 (326)
T 3bo9_A 92 DDLVKVCIEEKVPVVTFGAGNPTKYI----RELKEN-----------------------------GTKVIPVVASDSLAR 138 (326)
T ss_dssp HHHHHHHHHTTCSEEEEESSCCHHHH----HHHHHT-----------------------------TCEEEEEESSHHHHH
T ss_pred HHHHHHHHHCCCCEEEECCCCcHHHH----HHHHHc-----------------------------CCcEEEEcCCHHHHH
Confidence 34577788999999999776554333 333210 245677787876665
Q ss_pred HHHHHhccCCccEEEE-ChhhHHhhcCCCCCCCCHHHHHHHHHHHHHHHhCCCce--eecccCCchhHHHHHHCCCCEEE
Q 018508 227 RAEDIAAVDGVDCVQM-GPLDLSASMGYLWDPGHRKVREMMRVAEKGVLGGGKAY--LAGFAMPHDAPLEMKSRGYHMVS 303 (355)
Q Consensus 227 nieeIaavpgVD~l~i-Gp~DLs~slG~~~~~~~p~v~~ai~~iv~aa~a~g~~~--~g~~~~d~~~a~~~~~~G~~~vs 303 (355)
.+.+ -|+|+|.+ |+. . =|..++. +. ...+.++.+. ..+++ .||+ .+++.+..++++|.+++.
T Consensus 139 ~a~~----~GaD~i~v~g~~-~---GG~~G~~--~~-~~ll~~i~~~---~~iPviaaGGI-~~~~dv~~al~~GA~gV~ 203 (326)
T 3bo9_A 139 MVER----AGADAVIAEGME-S---GGHIGEV--TT-FVLVNKVSRS---VNIPVIAAGGI-ADGRGMAAAFALGAEAVQ 203 (326)
T ss_dssp HHHH----TTCSCEEEECTT-S---SEECCSS--CH-HHHHHHHHHH---CSSCEEEESSC-CSHHHHHHHHHHTCSEEE
T ss_pred HHHH----cCCCEEEEECCC-C---CccCCCc--cH-HHHHHHHHHH---cCCCEEEECCC-CCHHHHHHHHHhCCCEEE
Confidence 5443 37898888 642 1 1222221 22 2334444332 24443 3444 356778888889999999
Q ss_pred ecchH
Q 018508 304 GAVDV 308 (355)
Q Consensus 304 ~~~D~ 308 (355)
+|+-.
T Consensus 204 vGs~~ 208 (326)
T 3bo9_A 204 MGTRF 208 (326)
T ss_dssp ESHHH
T ss_pred echHH
Confidence 99654
No 196
>3n53_A Response regulator receiver modulated diguanylate; diguanylate cyclase, protein structure I II(PSI II), NYSGXRC, structural genomics; 2.20A {Pelobacter carbinolicus} SCOP: c.23.1.0
Probab=85.36 E-value=1.5 Score=34.65 Aligned_cols=99 Identities=16% Similarity=0.065 Sum_probs=55.3
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHh----CCCCeEEcCCCCCHHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAA----TGTPAILRLPESCPTW 149 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~----~g~~~iVRV~~~~~~~ 149 (355)
..+++.|... +-+..-.+..+..+.+....+|.|++|+.-...+ ..+.++.++. ...++++=....+...
T Consensus 17 ~~l~~~l~~~---~~v~~~~~~~~a~~~~~~~~~dlvi~D~~l~~~~---g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~ 90 (140)
T 3n53_A 17 IELKNFLDSE---YLVIESKNEKEALEQIDHHHPDLVILDMDIIGEN---SPNLCLKLKRSKGLKNVPLILLFSSEHKEA 90 (140)
T ss_dssp HHHHHHHTTT---SEEEEESSHHHHHHHHHHHCCSEEEEETTC---------CHHHHHHTSTTCTTCCEEEEECC----C
T ss_pred HHHHHHHHhc---ceEEEeCCHHHHHHHHhcCCCCEEEEeCCCCCCc---HHHHHHHHHcCcccCCCCEEEEecCCCHHH
Confidence 3566667655 3333333445566777778899999999864322 2223333332 2344444344444555
Q ss_pred HHHHHhcCCCeEeecCCCCHHHHHHHHHHc
Q 018508 150 AKKALDLGPQGVMFPMIDSPEAAKEAVSYC 179 (355)
Q Consensus 150 i~~aLdaGa~GImvP~Vesaeea~~vv~a~ 179 (355)
+.++++.|+++++. +=-+.+++...++.+
T Consensus 91 ~~~~~~~g~~~~l~-KP~~~~~l~~~i~~~ 119 (140)
T 3n53_A 91 IVNGLHSGADDYLT-KPFNRNDLLSRIEIH 119 (140)
T ss_dssp TTTTTTCCCSEEEE-SSCCHHHHHHHHHHH
T ss_pred HHHHHhcCCCeeee-CCCCHHHHHHHHHHH
Confidence 67788999988754 445778887666554
No 197
>2qvg_A Two component response regulator; NYSGXRC, PSI-2, structural genomics, protein structure initiative; 1.50A {Legionella pneumophila subsp}
Probab=85.30 E-value=5.2 Score=31.32 Aligned_cols=103 Identities=8% Similarity=-0.084 Sum_probs=59.7
Q ss_pred hHHHHHHHc-CCc-EEEEEEecCCHHHHHHhhh------cCCcEEEEeCCCCCCCHHHHHHHHHHHHh-CCCCeEEcCCC
Q 018508 74 ESLKYRLQS-NET-LYGLFLLSFSPTLAEISGL------AGYDFVVVDMEHGPGGISDALACLHALAA-TGTPAILRLPE 144 (355)
Q Consensus 74 n~lk~~L~~-G~~-~~gl~v~~~sp~~~e~aa~------~G~D~vilDlEh~~~~~~~a~~~i~a~~~-~g~~~iVRV~~ 144 (355)
..+++.|.. |-. .+.. -.+..+..+.+.. ..+|.|++|++-...+--++...++.... ...++++=...
T Consensus 21 ~~l~~~L~~~g~~~~v~~--~~~~~~a~~~l~~~~~~~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~ls~~ 98 (143)
T 2qvg_A 21 QSVERVFHKISSLIKIEI--AKSGNQALDMLYGRNKENKIHPKLILLDINIPKMNGIEFLKELRDDSSFTDIEVFVLTAA 98 (143)
T ss_dssp HHHHHHHHHHCTTCCEEE--ESSHHHHHHHHHTCTTCCCCCCSEEEEETTCTTSCHHHHHHHHTTSGGGTTCEEEEEESC
T ss_pred HHHHHHHHHhCCCceEEE--ECCHHHHHHHHHhcccccCCCCCEEEEecCCCCCCHHHHHHHHHcCccccCCcEEEEeCC
Confidence 456666764 321 2222 2223344555554 57999999998654443333333332111 33445555555
Q ss_pred CCHHHHHHHHhcCCCeEeecCCCCHHHHHHHHHHc
Q 018508 145 SCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYC 179 (355)
Q Consensus 145 ~~~~~i~~aLdaGa~GImvP~Vesaeea~~vv~a~ 179 (355)
.+......+++.|+++++ ++=-+.+++.+.+...
T Consensus 99 ~~~~~~~~~~~~g~~~~l-~kP~~~~~L~~~~~~~ 132 (143)
T 2qvg_A 99 YTSKDKLAFESLNIRGHL-IKPLDYGEAIKLFWIL 132 (143)
T ss_dssp CCHHHHHHHTTTTCCEEE-ESSCCHHHHHHHHHHH
T ss_pred CCHHHHHHHHhcCCCeEE-ECCCCHHHHHHHHHHH
Confidence 667788899999999875 4445778887765543
No 198
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=85.11 E-value=5 Score=36.29 Aligned_cols=124 Identities=10% Similarity=0.017 Sum_probs=74.4
Q ss_pred HHHHHHhCCCCeEEcCCCCCH--HHHHHHHhcCCCeEeecCCCCHHHHHHHHHHc-CCCCCCCCCCcccccccccCCCCc
Q 018508 127 CLHALAATGTPAILRLPESCP--TWAKKALDLGPQGVMFPMIDSPEAAKEAVSYC-RFPPSGVRGSAHTVVRASGYGIDE 203 (355)
Q Consensus 127 ~i~a~~~~g~~~iVRV~~~~~--~~i~~aLdaGa~GImvP~Vesaeea~~vv~a~-~~pP~G~Rg~g~~~~ra~~~g~~~ 203 (355)
.+..+...+..++||..+.+. ..+.++++.|++.|-+..- +....+.+.+.. +|+.
T Consensus 19 ~~~~l~~~~ii~V~r~~~~~~~~~~~~al~~gGv~~iel~~k-~~~~~~~i~~l~~~~~~-------------------- 77 (225)
T 1mxs_A 19 IDAICEKARILPVITIAREEDILPLADALAAGGIRTLEVTLR-SQHGLKAIQVLREQRPE-------------------- 77 (225)
T ss_dssp HHHHHHHHSEEEEECCSCGGGHHHHHHHHHHTTCCEEEEESS-STHHHHHHHHHHHHCTT--------------------
T ss_pred HHHHHHHCCEEEEEeCCCHHHHHHHHHHHHHCCCCEEEEecC-CccHHHHHHHHHHhCcc--------------------
Confidence 444555678889999977653 3578899999999999964 433333222222 2221
Q ss_pred cccccCCCceEEEEE--EccHHHHHHHHHHhccCCccEEEEChhhHHhhcCCCCCCCCHHHHHHHHHHHHHHHhCCCcee
Q 018508 204 GYLSNYEEELLIMCQ--VESEEGVKRAEDIAAVDGVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVAEKGVLGGGKAYL 281 (355)
Q Consensus 204 ~y~~~~n~~i~vi~m--IET~~av~nieeIaavpgVD~l~iGp~DLs~slG~~~~~~~p~v~~ai~~iv~aa~a~g~~~~ 281 (355)
..+.+- + +. +.++.-.+. |-|++..|..|. .+++.|+..|...+
T Consensus 78 ---------~~igagtvl-~~---d~~~~A~~a-GAd~v~~p~~d~--------------------~v~~~~~~~g~~~i 123 (225)
T 1mxs_A 78 ---------LCVGAGTVL-DR---SMFAAVEAA-GAQFVVTPGITE--------------------DILEAGVDSEIPLL 123 (225)
T ss_dssp ---------SEEEEECCC-SH---HHHHHHHHH-TCSSEECSSCCH--------------------HHHHHHHHCSSCEE
T ss_pred ---------cEEeeCeEe-eH---HHHHHHHHC-CCCEEEeCCCCH--------------------HHHHHHHHhCCCEE
Confidence 111111 2 33 223222222 678887554332 35567777887655
Q ss_pred ecccCCchhHHHHHHCCCCEEEecc
Q 018508 282 AGFAMPHDAPLEMKSRGYHMVSGAV 306 (355)
Q Consensus 282 g~~~~d~~~a~~~~~~G~~~vs~~~ 306 (355)
-| +.+++++....+.|++.+-+-+
T Consensus 124 ~G-~~t~~e~~~A~~~Gad~vk~FP 147 (225)
T 1mxs_A 124 PG-ISTPSEIMMGYALGYRRFKLFP 147 (225)
T ss_dssp CE-ECSHHHHHHHHTTTCCEEEETT
T ss_pred Ee-eCCHHHHHHHHHCCCCEEEEcc
Confidence 34 5677888888899999987744
No 199
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=84.96 E-value=5 Score=31.43 Aligned_cols=100 Identities=15% Similarity=0.186 Sum_probs=60.9
Q ss_pred hHHHHHHHc-CCcEEEEEEecCCH-HHHHHhhh-cCCcEEEEeCCCCCCCHHHHHHHHHHHHh----CCCCeEEcCCCCC
Q 018508 74 ESLKYRLQS-NETLYGLFLLSFSP-TLAEISGL-AGYDFVVVDMEHGPGGISDALACLHALAA----TGTPAILRLPESC 146 (355)
Q Consensus 74 n~lk~~L~~-G~~~~gl~v~~~sp-~~~e~aa~-~G~D~vilDlEh~~~~~~~a~~~i~a~~~----~g~~~iVRV~~~~ 146 (355)
..+++.|.. ....+ . ...+. +..+.+.. ..+|.|++|+.-.. .....+.++.++. ...++++=....+
T Consensus 18 ~~l~~~L~~~~~~~v--~-~~~~~~~a~~~l~~~~~~dlvi~D~~l~~--~~~g~~~~~~l~~~~~~~~~~ii~ls~~~~ 92 (140)
T 3lua_A 18 EKTKIIFDNIGEYDF--I-EVENLKKFYSIFKDLDSITLIIMDIAFPV--EKEGLEVLSAIRNNSRTANTPVIIATKSDN 92 (140)
T ss_dssp HHHHHHHHHHCCCEE--E-EECSHHHHHTTTTTCCCCSEEEECSCSSS--HHHHHHHHHHHHHSGGGTTCCEEEEESCCC
T ss_pred HHHHHHHHhccCccE--E-EECCHHHHHHHHhcCCCCcEEEEeCCCCC--CCcHHHHHHHHHhCcccCCCCEEEEeCCCC
Confidence 456777776 43322 2 23344 45566666 78999999998540 2233334444332 3455555555666
Q ss_pred HHHHHHHHhcCCCeEeecCCCCHHHHHHHHHHc
Q 018508 147 PTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYC 179 (355)
Q Consensus 147 ~~~i~~aLdaGa~GImvP~Vesaeea~~vv~a~ 179 (355)
...+.+++..|+++++. |=-+.+++...++.+
T Consensus 93 ~~~~~~~~~~g~~~~l~-KP~~~~~l~~~i~~~ 124 (140)
T 3lua_A 93 PGYRHAALKFKVSDYIL-KPYPTKRLENSVRSV 124 (140)
T ss_dssp HHHHHHHHHSCCSEEEE-SSCCTTHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEE-CCCCHHHHHHHHHHH
Confidence 77889999999998654 334567777666655
No 200
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=84.96 E-value=9.8 Score=35.74 Aligned_cols=69 Identities=20% Similarity=0.103 Sum_probs=49.0
Q ss_pred EEEEEEe----cCC-HHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHHHhcCCCe
Q 018508 86 LYGLFLL----SFS-PTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQG 160 (355)
Q Consensus 86 ~~gl~v~----~~s-p~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~aLdaGa~G 160 (355)
.++++++ -+. .+.++.+...|+|+|.+..++. ...++.++..+..+++-+. +....+++.+.|+++
T Consensus 71 ~v~l~v~~~~~~~~~~~~~~~~~~~g~d~V~~~~g~p-------~~~~~~l~~~gi~vi~~v~--t~~~a~~~~~~GaD~ 141 (328)
T 2gjl_A 71 GVNLTLLPTQKPVPYAEYRAAIIEAGIRVVETAGNDP-------GEHIAEFRRHGVKVIHKCT--AVRHALKAERLGVDA 141 (328)
T ss_dssp EEEEEECCCSSCCCHHHHHHHHHHTTCCEEEEEESCC-------HHHHHHHHHTTCEEEEEES--SHHHHHHHHHTTCSE
T ss_pred EEEEeccccccCccHHHHHHHHHhcCCCEEEEcCCCc-------HHHHHHHHHcCCCEEeeCC--CHHHHHHHHHcCCCE
Confidence 5667765 222 3678889999999999998752 2344445555777776553 456778889999999
Q ss_pred Eee
Q 018508 161 VMF 163 (355)
Q Consensus 161 Imv 163 (355)
|++
T Consensus 142 i~v 144 (328)
T 2gjl_A 142 VSI 144 (328)
T ss_dssp EEE
T ss_pred EEE
Confidence 998
No 201
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=84.77 E-value=12 Score=29.17 Aligned_cols=103 Identities=9% Similarity=-0.075 Sum_probs=63.1
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHH-hCCCCeEEcCCCCCHHHHHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALA-ATGTPAILRLPESCPTWAKK 152 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~-~~g~~~iVRV~~~~~~~i~~ 152 (355)
..++..|..-...+ ..-.+..+..+.+....+|.|++|+.-...+--++...++... ....++++=....+.....+
T Consensus 18 ~~l~~~L~~~g~~v--~~~~~~~~al~~~~~~~~dlvl~D~~lp~~~g~~~~~~lr~~~~~~~~pii~~t~~~~~~~~~~ 95 (136)
T 3t6k_A 18 EMLELVLRGAGYEV--RRAASGEEALQQIYKNLPDALICDVLLPGIDGYTLCKRVRQHPLTKTLPILMLTAQGDISAKIA 95 (136)
T ss_dssp HHHHHHHHHTTCEE--EEESSHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHSGGGTTCCEEEEECTTCHHHHHH
T ss_pred HHHHHHHHHCCCEE--EEeCCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHcCCCcCCccEEEEecCCCHHHHHH
Confidence 34666666433322 2223344556777778899999999875544444444444321 22345555455556777888
Q ss_pred HHhcCCCeEeecCCCCHHHHHHHHHHc
Q 018508 153 ALDLGPQGVMFPMIDSPEAAKEAVSYC 179 (355)
Q Consensus 153 aLdaGa~GImvP~Vesaeea~~vv~a~ 179 (355)
++.+|+++++ +|=-+.+++...++.+
T Consensus 96 ~~~~ga~~~l-~KP~~~~~L~~~i~~~ 121 (136)
T 3t6k_A 96 GFEAGANDYL-AKPFEPQELVYRVKNI 121 (136)
T ss_dssp HHHHTCSEEE-ETTCCHHHHHHHHHHH
T ss_pred HHhcCcceEE-eCCCCHHHHHHHHHHH
Confidence 9999999864 4545678887666654
No 202
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=84.39 E-value=6.2 Score=34.97 Aligned_cols=65 Identities=9% Similarity=-0.029 Sum_probs=43.8
Q ss_pred CHHHHHHhhhcCCcEEEEeCCCCCCC-HHHHHHHHHHHHh--CCCCeEEcCCCCCHHHHHHHHhcCCCeE
Q 018508 95 SPTLAEISGLAGYDFVVVDMEHGPGG-ISDALACLHALAA--TGTPAILRLPESCPTWAKKALDLGPQGV 161 (355)
Q Consensus 95 sp~~~e~aa~~G~D~vilDlEh~~~~-~~~a~~~i~a~~~--~g~~~iVRV~~~~~~~i~~aLdaGa~GI 161 (355)
..+.++.+...|+|+|.++.++.... -....+.++.++. .+..+++.+. ....+.++++.|++.|
T Consensus 90 ~~~~i~~~~~~Gad~V~l~~~~~~~~~~~~~~~~i~~i~~~~~~~~v~~~~~--t~~ea~~a~~~Gad~i 157 (234)
T 1yxy_A 90 TMTEVDQLAALNIAVIAMDCTKRDRHDGLDIASFIRQVKEKYPNQLLMADIS--TFDEGLVAHQAGIDFV 157 (234)
T ss_dssp SHHHHHHHHTTTCSEEEEECCSSCCTTCCCHHHHHHHHHHHCTTCEEEEECS--SHHHHHHHHHTTCSEE
T ss_pred hHHHHHHHHHcCCCEEEEcccccCCCCCccHHHHHHHHHHhCCCCeEEEeCC--CHHHHHHHHHcCCCEE
Confidence 45678889999999999999875210 0122344444432 2566777664 3566888899999988
No 203
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=84.28 E-value=15 Score=35.53 Aligned_cols=64 Identities=20% Similarity=0.187 Sum_probs=40.4
Q ss_pred HHHHHhhhcCCcEEEEeCC-----CCCC--CHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHHHhcCCCeEeec
Q 018508 97 TLAEISGLAGYDFVVVDME-----HGPG--GISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFP 164 (355)
Q Consensus 97 ~~~e~aa~~G~D~vilDlE-----h~~~--~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~aLdaGa~GImvP 164 (355)
+.++.+...|+|++.+|.. |... ..+....+ .+..+.++++. ...++..+++++++|+++|++-
T Consensus 169 e~a~~~~~agad~i~i~~~~~~~~~~~~~~~~~~i~~l---~~~~~~pvi~g-gi~t~e~a~~~~~~Gad~i~vg 239 (393)
T 2qr6_A 169 EIAPIVIKAGADLLVIQGTLISAEHVNTGGEALNLKEF---IGSLDVPVIAG-GVNDYTTALHMMRTGAVGIIVG 239 (393)
T ss_dssp HHHHHHHHTTCSEEEEECSSCCSSCCCC-----CHHHH---HHHCSSCEEEE-CCCSHHHHHHHHTTTCSEEEES
T ss_pred HHHHHHHHCCCCEEEEeCCccccccCCCcccHHHHHHH---HHhcCCCEEEC-CcCCHHHHHHHHHcCCCEEEEC
Confidence 3455666789999999843 3211 22222222 23457777773 3345778999999999999994
No 204
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=84.28 E-value=12 Score=28.53 Aligned_cols=100 Identities=11% Similarity=0.045 Sum_probs=59.3
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHh-CCCCeEEcCCCCCHHHHHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAA-TGTPAILRLPESCPTWAKK 152 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~-~g~~~iVRV~~~~~~~i~~ 152 (355)
..++..|......+. ...+..+..+.+....+|.|++|+.-...+- .+.++.++. ...++++=....+.....+
T Consensus 16 ~~l~~~L~~~g~~v~--~~~~~~~al~~~~~~~~dlii~D~~~p~~~g---~~~~~~lr~~~~~~ii~~t~~~~~~~~~~ 90 (120)
T 3f6p_A 16 DILEFNLRKEGYEVH--CAHDGNEAVEMVEELQPDLILLDIMLPNKDG---VEVCREVRKKYDMPIIMLTAKDSEIDKVI 90 (120)
T ss_dssp HHHHHHHHHTTCEEE--EESSHHHHHHHHHTTCCSEEEEETTSTTTHH---HHHHHHHHTTCCSCEEEEEESSCHHHHHH
T ss_pred HHHHHHHHhCCEEEE--EeCCHHHHHHHHhhCCCCEEEEeCCCCCCCH---HHHHHHHHhcCCCCEEEEECCCChHHHHH
Confidence 346666654433332 2233345567777788999999998643322 233333332 3445554444556667788
Q ss_pred HHhcCCCeEeecCCCCHHHHHHHHHHc
Q 018508 153 ALDLGPQGVMFPMIDSPEAAKEAVSYC 179 (355)
Q Consensus 153 aLdaGa~GImvP~Vesaeea~~vv~a~ 179 (355)
+++.|+++.+. |=-+.+++...++.+
T Consensus 91 ~~~~ga~~~l~-KP~~~~~l~~~i~~~ 116 (120)
T 3f6p_A 91 GLEIGADDYVT-KPFSTRELLARVKAN 116 (120)
T ss_dssp HHHTTCCEEEE-ESCCHHHHHHHHHHH
T ss_pred HHhCCcceeEc-CCCCHHHHHHHHHHH
Confidence 99999988654 334677776666543
No 205
>1kgs_A DRRD, DNA binding response regulator D; DNA-binding protein, ALPH-beta sandwich, winged-helix, helix helix, DNA binding protein; HET: DNA MSE; 1.50A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nnn_A*
Probab=84.09 E-value=9.2 Score=32.60 Aligned_cols=102 Identities=13% Similarity=0.073 Sum_probs=60.9
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKA 153 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~a 153 (355)
..+++.|......+. .-.+..+..+.+....+|.|++|+.-...+--++...++.. ....++++=....+...+..+
T Consensus 16 ~~l~~~L~~~g~~v~--~~~~~~~a~~~~~~~~~dlvllD~~l~~~~g~~~~~~lr~~-~~~~~ii~ls~~~~~~~~~~~ 92 (225)
T 1kgs_A 16 DLITEALKKEMFTVD--VCYDGEEGMYMALNEPFDVVILDIMLPVHDGWEILKSMRES-GVNTPVLMLTALSDVEYRVKG 92 (225)
T ss_dssp HHHHHHHHHTTCEEE--EESSHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHT-TCCCCEEEEESSCHHHHHHHT
T ss_pred HHHHHHHHHCCCEEE--EECCHHHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhc-CCCCCEEEEeCCCCHHHHHHH
Confidence 346667765333332 22333455667777889999999986544433333333321 123444444444455678889
Q ss_pred HhcCCCeEeecCCCCHHHHHHHHHHc
Q 018508 154 LDLGPQGVMFPMIDSPEAAKEAVSYC 179 (355)
Q Consensus 154 LdaGa~GImvP~Vesaeea~~vv~a~ 179 (355)
++.|+++++ ++--+.+++...++.+
T Consensus 93 ~~~ga~~~l-~Kp~~~~~l~~~i~~~ 117 (225)
T 1kgs_A 93 LNMGADDYL-PKPFDLRELIARVRAL 117 (225)
T ss_dssp CCCCCSEEE-ESSCCHHHHHHHHHHH
T ss_pred HhCCccEEE-eCCCCHHHHHHHHHHH
Confidence 999999875 4445788887666654
No 206
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=84.01 E-value=14 Score=29.27 Aligned_cols=102 Identities=13% Similarity=-0.029 Sum_probs=60.2
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKA 153 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~a 153 (355)
..+++.|..-... +..-.+..+..+.+....+|.|++|+.-...+--++...++.. ....++++=....+...+..+
T Consensus 21 ~~l~~~L~~~g~~--v~~~~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~-~~~~~ii~ls~~~~~~~~~~~ 97 (154)
T 2rjn_A 21 NSLKRLIKRLGCN--IITFTSPLDALEALKGTSVQLVISDMRMPEMGGEVFLEQVAKS-YPDIERVVISGYADAQATIDA 97 (154)
T ss_dssp HHHHHHHHTTTCE--EEEESCHHHHHHHHTTSCCSEEEEESSCSSSCHHHHHHHHHHH-CTTSEEEEEECGGGHHHHHHH
T ss_pred HHHHHHHHHcCCe--EEEeCCHHHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHh-CCCCcEEEEecCCCHHHHHHH
Confidence 4567777653322 2222333445666777789999999986554433443344332 223445554454556677888
Q ss_pred HhcC-CCeEeecCCCCHHHHHHHHHHc
Q 018508 154 LDLG-PQGVMFPMIDSPEAAKEAVSYC 179 (355)
Q Consensus 154 LdaG-a~GImvP~Vesaeea~~vv~a~ 179 (355)
+..| +++++ ++--+.+++...++.+
T Consensus 98 ~~~g~~~~~l-~kP~~~~~L~~~i~~~ 123 (154)
T 2rjn_A 98 VNRGKISRFL-LKPWEDEDVFKVVEKG 123 (154)
T ss_dssp HHTTCCSEEE-ESSCCHHHHHHHHHHH
T ss_pred Hhccchheee-eCCCCHHHHHHHHHHH
Confidence 9887 88765 3444677776666543
No 207
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=83.95 E-value=13 Score=28.59 Aligned_cols=103 Identities=14% Similarity=0.129 Sum_probs=59.2
Q ss_pred hHHHHHHHcCCcEEEEE-EecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHH
Q 018508 74 ESLKYRLQSNETLYGLF-LLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKK 152 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~-v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~ 152 (355)
..+++.|.... +... .-.+..+..+.+....+|.|++|+.-...+--+....++.. ....++++=....+.....+
T Consensus 15 ~~l~~~L~~~g--~~v~~~~~~~~~a~~~~~~~~~dlii~d~~l~~~~g~~~~~~l~~~-~~~~~ii~~s~~~~~~~~~~ 91 (134)
T 3f6c_A 15 AAIRNLLIKND--IEILAELTEGGSAVQRVETLKPDIVIIDVDIPGVNGIQVLETLRKR-QYSGIIIIVSAKNDHFYGKH 91 (134)
T ss_dssp HHHHHHHHHTT--EEEEEEESSSTTHHHHHHHHCCSEEEEETTCSSSCHHHHHHHHHHT-TCCSEEEEEECC---CTHHH
T ss_pred HHHHHHHhhCC--cEEEEEcCCHHHHHHHHHhcCCCEEEEecCCCCCChHHHHHHHHhc-CCCCeEEEEeCCCChHHHHH
Confidence 34666666433 2222 22334456677777889999999987655544444444431 12333343334444556788
Q ss_pred HHhcCCCeEeecCCCCHHHHHHHHHHcC
Q 018508 153 ALDLGPQGVMFPMIDSPEAAKEAVSYCR 180 (355)
Q Consensus 153 aLdaGa~GImvP~Vesaeea~~vv~a~~ 180 (355)
++..|+++++.- --+.+++...++.+.
T Consensus 92 ~~~~g~~~~l~k-p~~~~~l~~~i~~~~ 118 (134)
T 3f6c_A 92 CADAGANGFVSK-KEGMNNIIAAIEAAK 118 (134)
T ss_dssp HHHTTCSEEEEG-GGCTHHHHHHHHHHH
T ss_pred HHHhCCCEEEeC-CCCHHHHHHHHHHHH
Confidence 999999986543 346677777666553
No 208
>1p6q_A CHEY2; chemotaxis, signal transduction, response regulator, structural proteomics in europe, spine, structural genomics; NMR {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1p6u_A
Probab=83.78 E-value=10 Score=28.88 Aligned_cols=102 Identities=18% Similarity=0.043 Sum_probs=59.4
Q ss_pred hHHHHHHHcCCc-EEEEEEecCC-HHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHh-CCCCeEEcCCCCCHHHH
Q 018508 74 ESLKYRLQSNET-LYGLFLLSFS-PTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAA-TGTPAILRLPESCPTWA 150 (355)
Q Consensus 74 n~lk~~L~~G~~-~~gl~v~~~s-p~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~-~g~~~iVRV~~~~~~~i 150 (355)
..+++.|..... .+. ...+ .+..+.+....+|.|++|+.-...+--+....++.... ...++++=....+....
T Consensus 20 ~~l~~~L~~~g~~~v~---~~~~~~~a~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~ 96 (129)
T 1p6q_A 20 LLLGDALQQLGFKQIT---AAGDGEQGMKIMAQNPHHLVISDFNMPKMDGLGLLQAVRANPATKKAAFIILTAQGDRALV 96 (129)
T ss_dssp HHHHHHHHTTTCSCEE---CCSSHHHHHHHHHTSCCSEEEECSSSCSSCHHHHHHHHTTCTTSTTCEEEECCSCCCHHHH
T ss_pred HHHHHHHHHCCCcEEE---ecCCHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHhcCccccCCCEEEEeCCCCHHHH
Confidence 456677764322 222 2334 34556666677999999998754443333333322111 22334443444456677
Q ss_pred HHHHhcCCCeEeecCCCCHHHHHHHHHHc
Q 018508 151 KKALDLGPQGVMFPMIDSPEAAKEAVSYC 179 (355)
Q Consensus 151 ~~aLdaGa~GImvP~Vesaeea~~vv~a~ 179 (355)
.++++.|+++++ +|--+.+++...++.+
T Consensus 97 ~~~~~~g~~~~l-~KP~~~~~l~~~i~~~ 124 (129)
T 1p6q_A 97 QKAAALGANNVL-AKPFTIEKMKAAIEAV 124 (129)
T ss_dssp HHHHHHTCSCEE-CCCSSHHHHHHHHHHH
T ss_pred HHHHHcCCCEEE-ECCCCHHHHHHHHHHH
Confidence 889999998864 4555788887777654
No 209
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=83.60 E-value=20 Score=34.20 Aligned_cols=60 Identities=13% Similarity=0.080 Sum_probs=43.7
Q ss_pred HHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHHHhcCCCeEee
Q 018508 96 PTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMF 163 (355)
Q Consensus 96 p~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~aLdaGa~GImv 163 (355)
...++.+...|+|+|.+-.+.. .. +.++.++..+..+++.+. +...++++.+.|+|.|++
T Consensus 112 ~~~~~~~~~~g~~~V~~~~g~~--~~----~~i~~~~~~g~~v~~~v~--t~~~a~~a~~~GaD~i~v 171 (369)
T 3bw2_A 112 DAKLAVLLDDPVPVVSFHFGVP--DR----EVIARLRRAGTLTLVTAT--TPEEARAVEAAGADAVIA 171 (369)
T ss_dssp HHHHHHHHHSCCSEEEEESSCC--CH----HHHHHHHHTTCEEEEEES--SHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHhcCCCEEEEeCCCC--cH----HHHHHHHHCCCeEEEECC--CHHHHHHHHHcCCCEEEE
Confidence 4567888889999999976542 22 334444456788888875 356688889999999988
No 210
>2oqr_A Sensory transduction protein REGX3; response regulator, winged-helix-turn-helix, DNA-binding, 3D swapping, two component system; 2.03A {Mycobacterium tuberculosis H37RV}
Probab=83.03 E-value=11 Score=32.33 Aligned_cols=102 Identities=17% Similarity=0.138 Sum_probs=61.6
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKA 153 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~a 153 (355)
..+++.|......+. .-.+..+..+.+....+|.|++|+.-...+--++...++. ....++++=....+......+
T Consensus 18 ~~l~~~L~~~g~~v~--~~~~~~~al~~~~~~~~dlvllD~~l~~~~g~~~~~~l~~--~~~~~ii~lt~~~~~~~~~~~ 93 (230)
T 2oqr_A 18 DPLAFLLRKEGFEAT--VVTDGPAALAEFDRAGADIVLLDLMLPGMSGTDVCKQLRA--RSSVPVIMVTARDSEIDKVVG 93 (230)
T ss_dssp HHHHHHHHHTTCEEE--EECSHHHHHHHHHHHCCSEEEEESSCSSSCHHHHHHHHHH--HCSCSEEEEECCHHHHHHHHH
T ss_pred HHHHHHHHHCCCEEE--EECCHHHHHHHHhccCCCEEEEECCCCCCCHHHHHHHHHc--CCCCCEEEEeCCCcHHHHHHH
Confidence 456667764333322 2223344556666778999999998654443344444443 234455544444445567889
Q ss_pred HhcCCCeEeecCCCCHHHHHHHHHHcC
Q 018508 154 LDLGPQGVMFPMIDSPEAAKEAVSYCR 180 (355)
Q Consensus 154 LdaGa~GImvP~Vesaeea~~vv~a~~ 180 (355)
++.|+++++ ++--+.+++...++.+.
T Consensus 94 ~~~ga~~~l-~Kp~~~~~l~~~i~~~~ 119 (230)
T 2oqr_A 94 LELGADDYV-TKPYSARELIARIRAVL 119 (230)
T ss_dssp HHHCCSCCC-CSSCCHHHHHHHHHHHH
T ss_pred HHcCCCEEE-eCCCCHHHHHHHHHHHH
Confidence 999999864 45557888887776653
No 211
>1mvo_A PHOP response regulator; phosphate regulon, transcriptional regulatory protein, alpha/beta doubly wound fold, phosphorylation; 1.60A {Bacillus subtilis} SCOP: c.23.1.1
Probab=82.82 E-value=13 Score=28.52 Aligned_cols=102 Identities=16% Similarity=0.038 Sum_probs=58.9
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKA 153 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~a 153 (355)
..+++.|......+. .-.+..+..+.+....+|.|++|+.-...+--++...++.. ....++++=....+......+
T Consensus 17 ~~l~~~L~~~g~~v~--~~~~~~~a~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~-~~~~~ii~~s~~~~~~~~~~~ 93 (136)
T 1mvo_A 17 TLLQYNLERSGYDVI--TASDGEEALKKAETEKPDLIVLDVMLPKLDGIEVCKQLRQQ-KLMFPILMLTAKDEEFDKVLG 93 (136)
T ss_dssp HHHHHHHHHTTCEEE--EESSHHHHHHHHHHHCCSEEEEESSCSSSCHHHHHHHHHHT-TCCCCEEEEECTTCCCCHHHH
T ss_pred HHHHHHHHHCCcEEE--EecCHHHHHHHHhhcCCCEEEEecCCCCCCHHHHHHHHHcC-CCCCCEEEEECCCCHHHHHHH
Confidence 346666764333322 22233445566667789999999987654433333333331 123344443333444456778
Q ss_pred HhcCCCeEeecCCCCHHHHHHHHHHc
Q 018508 154 LDLGPQGVMFPMIDSPEAAKEAVSYC 179 (355)
Q Consensus 154 LdaGa~GImvP~Vesaeea~~vv~a~ 179 (355)
++.|+++++ +|=-+.+++...++.+
T Consensus 94 ~~~g~~~~l-~KP~~~~~l~~~i~~~ 118 (136)
T 1mvo_A 94 LELGADDYM-TKPFSPREVNARVKAI 118 (136)
T ss_dssp HHTTCCEEE-ESSCCHHHHHHHHHHH
T ss_pred HhCCCCEEE-ECCCCHHHHHHHHHHH
Confidence 999999865 4445778887766654
No 212
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=82.63 E-value=8.2 Score=30.06 Aligned_cols=103 Identities=8% Similarity=-0.047 Sum_probs=59.6
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHh-CCCCeEEcCCCCCHHHHH-
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAA-TGTPAILRLPESCPTWAK- 151 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~-~g~~~iVRV~~~~~~~i~- 151 (355)
..+++.|......+. .-.+..+..+.+....+|.|++|++-...+--++...++.... ...++++=....+.....
T Consensus 20 ~~l~~~l~~~g~~v~--~~~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~ 97 (140)
T 3grc_A 20 RLLNLMLEKGGFDSD--MVHSAAQALEQVARRPYAAMTVDLNLPDQDGVSLIRALRRDSRTRDLAIVVVSANAREGELEF 97 (140)
T ss_dssp HHHHHHHHHTTCEEE--EECSHHHHHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHTSGGGTTCEEEEECTTHHHHHHHH
T ss_pred HHHHHHHHHCCCeEE--EECCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCcccCCCCEEEEecCCChHHHHH
Confidence 456677765444332 2233445667777888999999998765454444344433112 233444433333334455
Q ss_pred HHHhcCCCeEeecCCCCHHHHHHHHHHc
Q 018508 152 KALDLGPQGVMFPMIDSPEAAKEAVSYC 179 (355)
Q Consensus 152 ~aLdaGa~GImvP~Vesaeea~~vv~a~ 179 (355)
.++..|+++++. +=-+.+++...++.+
T Consensus 98 ~~~~~g~~~~l~-kP~~~~~l~~~i~~~ 124 (140)
T 3grc_A 98 NSQPLAVSTWLE-KPIDENLLILSLHRA 124 (140)
T ss_dssp CCTTTCCCEEEC-SSCCHHHHHHHHHHH
T ss_pred HhhhcCCCEEEe-CCCCHHHHHHHHHHH
Confidence 788899988654 334778877666554
No 213
>3t8y_A CHEB, chemotaxis response regulator protein-glutamate methylesterase; CHEA, hydrolase; 1.90A {Thermotoga maritima}
Probab=82.60 E-value=18 Score=29.36 Aligned_cols=89 Identities=16% Similarity=0.008 Sum_probs=50.2
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCC--HHHHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESC--PTWAK 151 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~--~~~i~ 151 (355)
..+++.|..-....-+..-.+..+..+.+....+|.|++|++-...+--++...++.. ...++++=....+ ...+.
T Consensus 39 ~~l~~~L~~~~~~~~v~~~~~~~~al~~l~~~~~dlvilD~~l~~~~g~~l~~~lr~~--~~~~ii~~s~~~~~~~~~~~ 116 (164)
T 3t8y_A 39 MVLKDIIDSQPDMKVVGFAKDGLEAVEKAIELKPDVITMDIEMPNLNGIEALKLIMKK--APTRVIMVSSLTEEGAAITI 116 (164)
T ss_dssp HHHHHHHHTSTTEEEEEEESSHHHHHHHHHHHCCSEEEECSSCSSSCHHHHHHHHHHH--SCCEEEEEESSCCTTCHHHH
T ss_pred HHHHHHHhcCCCeEEEEecCCHHHHHHHhccCCCCEEEEeCCCCCCCHHHHHHHHHhc--CCceEEEEecCCccchHHHH
Confidence 3566777653222222222334456677777889999999986655544444444432 3333332222222 33577
Q ss_pred HHHhcCCCeEeec
Q 018508 152 KALDLGPQGVMFP 164 (355)
Q Consensus 152 ~aLdaGa~GImvP 164 (355)
++++.|+++++.=
T Consensus 117 ~~~~~ga~~~l~K 129 (164)
T 3t8y_A 117 EALRNGAVDFITK 129 (164)
T ss_dssp HHHHTTCCEEEEC
T ss_pred HHHHcCcCEEEeC
Confidence 8999999987653
No 214
>1f8m_A Isocitrate lyase, ICL; alpha-beta barrel, helix-swapping, closed conformation, bromopyuvate modification, structural genomics; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.1.12.7 PDB: 1f61_A 1f8i_A
Probab=82.44 E-value=42 Score=33.43 Aligned_cols=39 Identities=21% Similarity=0.106 Sum_probs=29.0
Q ss_pred chHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEe
Q 018508 73 PESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVD 113 (355)
Q Consensus 73 ~n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilD 113 (355)
...|++.|..++++ ...+.-++..+..+..+||+.|++-
T Consensus 54 a~~lr~lL~~~~~~--~~~ga~d~~sA~~~~~aGf~Aiy~S 92 (429)
T 1f8m_A 54 AEVLWEQLHDLEWV--NALGALTGNMAVQQVRAGLKAIYLS 92 (429)
T ss_dssp HHHHHHHHHHSSCE--EEEBCCSHHHHHHHHHTTCSCEEEC
T ss_pred HHHHHHHHhcCCce--ecCCCCCHHHHHHHHHcCCCEEEec
Confidence 46788899887652 2334568888888888999999874
No 215
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=82.21 E-value=18 Score=31.69 Aligned_cols=102 Identities=16% Similarity=0.031 Sum_probs=62.8
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKA 153 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~a 153 (355)
..++..|......+ ..-.+..+..+.+....+|.|++|+.-...+--++...++.. ....++++=....+...+.++
T Consensus 37 ~~l~~~L~~~g~~v--~~~~~~~~al~~~~~~~~dlvllD~~lp~~~g~~~~~~lr~~-~~~~~ii~lt~~~~~~~~~~~ 113 (250)
T 3r0j_A 37 ELLSVSLKFQGFEV--YTATNGAQALDRARETRPDAVILDVXMPGMDGFGVLRRLRAD-GIDAPALFLTARDSLQDKIAG 113 (250)
T ss_dssp HHHHHHHHHTTCEE--EEESSHHHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHHT-TCCCCEEEEECSTTHHHHHHH
T ss_pred HHHHHHHHHCCCEE--EEECCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhc-CCCCCEEEEECCCCHHHHHHH
Confidence 35666676443332 222344456677777889999999986544433333333321 123455554455566778899
Q ss_pred HhcCCCeEeecCCCCHHHHHHHHHHc
Q 018508 154 LDLGPQGVMFPMIDSPEAAKEAVSYC 179 (355)
Q Consensus 154 LdaGa~GImvP~Vesaeea~~vv~a~ 179 (355)
+++|+++.+. |=-+.+++...++.+
T Consensus 114 ~~~Ga~~yl~-Kp~~~~~L~~~i~~~ 138 (250)
T 3r0j_A 114 LTLGGDDYVT-KPFSLEEVVARLRVI 138 (250)
T ss_dssp HTSTTCEEEE-SSCCHHHHHHHHHHH
T ss_pred HHcCCcEEEe-CCCCHHHHHHHHHHH
Confidence 9999998754 445778887666654
No 216
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=81.83 E-value=3.6 Score=37.46 Aligned_cols=116 Identities=17% Similarity=0.133 Sum_probs=72.5
Q ss_pred HHHhhhcCCcEEEEeCCCCC--CCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHHHhcCCCeEee----------c-C
Q 018508 99 AEISGLAGYDFVVVDMEHGP--GGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMF----------P-M 165 (355)
Q Consensus 99 ~e~aa~~G~D~vilDlEh~~--~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~aLdaGa~GImv----------P-~ 165 (355)
++.+...|+|+|+|- |+- ....+....+..+...|..++|=|.+ .....++++.++.-|-+ | +
T Consensus 81 ~~~l~~~Ga~~Vllg--hseRR~~~~e~~~k~~~A~~~GL~~ivcVge--~~e~~~~~~~~~~iIayep~waiGtG~~v~ 156 (225)
T 1hg3_A 81 PEAVKEAGAVGTLLN--HSENRMILADLEAAIRRAEEVGLMTMVCSNN--PAVSAAVAALNPDYVAVEPPELIGTGIPVS 156 (225)
T ss_dssp HHHHHHTTCCEEEES--CGGGCCBHHHHHHHHHHHHHHTCEEEEEESS--HHHHHHHHTTCCSEEEECCTTTTTTSCCTT
T ss_pred HHHHHHcCCCEEEEC--cchhcCCHHHHHHHHHHHHHCCCEEEEEeCC--HHHHHHHhcCCCCEEEEeChhhhccCCCCC
Confidence 678889999999964 443 55566777777777889999998875 44456666666542222 0 3
Q ss_pred CCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEEccHHHHHHHHHHhccCCccEEEEChh
Q 018508 166 IDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKRAEDIAAVDGVDCVQMGPL 245 (355)
Q Consensus 166 Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mIET~~av~nieeIaavpgVD~l~iGp~ 245 (355)
.-++++++...+.++.-|.+. .+.-..-|-+. |..++++.+++|++.+|..
T Consensus 157 t~~~d~~~~~~~~ir~~~~~~-------------------------~ilyggsV~~~----n~~~~~~~~~vDG~LVG~a 207 (225)
T 1hg3_A 157 KAKPEVITNTVELVKKVNPEV-------------------------KVLCGAGISTG----EDVKKAIELGTVGVLLASG 207 (225)
T ss_dssp TSCTHHHHHHHHHHHHHCTTS-------------------------EEEEESSCCSH----HHHHHHHHTTCSEEEESHH
T ss_pred CCChhHHHHHHHHHHhccCCC-------------------------EEEEeCCCCcH----HHHHHHHhCCCCEEEeCHH
Confidence 456677777666665422111 11122224444 3444555679999999976
Q ss_pred hH
Q 018508 246 DL 247 (355)
Q Consensus 246 DL 247 (355)
=|
T Consensus 208 ~l 209 (225)
T 1hg3_A 208 VT 209 (225)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 217
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=81.76 E-value=1.7 Score=40.01 Aligned_cols=66 Identities=15% Similarity=0.071 Sum_probs=48.5
Q ss_pred cCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHHHhcCCCeEee
Q 018508 93 SFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMF 163 (355)
Q Consensus 93 ~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~aLdaGa~GImv 163 (355)
+-++..++.+...|+|.|+|....-+ +++++++..+...|..++|-+.+ ...+.++++.|++-|-+
T Consensus 115 I~d~~qi~~a~~~GAD~VlL~~~~l~---~~l~~l~~~a~~lGl~~lvev~~--~~E~~~a~~~gad~IGv 180 (254)
T 1vc4_A 115 VVDPFMLEEARAFGASAALLIVALLG---ELTGAYLEEARRLGLEALVEVHT--ERELEIALEAGAEVLGI 180 (254)
T ss_dssp CCSHHHHHHHHHTTCSEEEEEHHHHG---GGHHHHHHHHHHHTCEEEEEECS--HHHHHHHHHHTCSEEEE
T ss_pred CCCHHHHHHHHHcCCCEEEECccchH---HHHHHHHHHHHHCCCeEEEEECC--HHHHHHHHHcCCCEEEE
Confidence 35776778888999999999877543 56777777666668887777664 45677899999876544
No 218
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=81.61 E-value=6.7 Score=30.67 Aligned_cols=100 Identities=11% Similarity=-0.038 Sum_probs=60.1
Q ss_pred hHHHHHHHcCCcEEEEEEecCCH-HHHHHhhhcCCcEEEEeCCCCC--CCHHHHHHHHHHHHh--CCCCeEEcCCCCCHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSP-TLAEISGLAGYDFVVVDMEHGP--GGISDALACLHALAA--TGTPAILRLPESCPT 148 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp-~~~e~aa~~G~D~vilDlEh~~--~~~~~a~~~i~a~~~--~g~~~iVRV~~~~~~ 148 (355)
..+++.|..-... +. ...+. +..+.+....+|.|++|+.-.. .+- .+.++.++. ...++++=....+..
T Consensus 20 ~~l~~~L~~~g~~--v~-~~~~~~~a~~~l~~~~~dlvi~D~~l~~~~~~g---~~~~~~l~~~~~~~~ii~~s~~~~~~ 93 (136)
T 3kto_A 20 AALSKLLSPLDVT--IQ-CFASAESFMRQQISDDAIGMIIEAHLEDKKDSG---IELLETLVKRGFHLPTIVMASSSDIP 93 (136)
T ss_dssp HHHHHHHTTSSSE--EE-EESSHHHHTTSCCCTTEEEEEEETTGGGBTTHH---HHHHHHHHHTTCCCCEEEEESSCCHH
T ss_pred HHHHHHHHHCCcE--EE-EeCCHHHHHHHHhccCCCEEEEeCcCCCCCccH---HHHHHHHHhCCCCCCEEEEEcCCCHH
Confidence 3566667653332 22 23344 3445566677999999998543 332 233333332 234555545555677
Q ss_pred HHHHHHhcCCCeEeecCCCCHHHHHHHHHHcC
Q 018508 149 WAKKALDLGPQGVMFPMIDSPEAAKEAVSYCR 180 (355)
Q Consensus 149 ~i~~aLdaGa~GImvP~Vesaeea~~vv~a~~ 180 (355)
...++++.|+++++. |=-+.+++...++.+.
T Consensus 94 ~~~~~~~~ga~~~l~-KP~~~~~l~~~i~~~~ 124 (136)
T 3kto_A 94 TAVRAMRASAADFIE-KPFIEHVLVHDVQQII 124 (136)
T ss_dssp HHHHHHHTTCSEEEE-SSBCHHHHHHHHHHHH
T ss_pred HHHHHHHcChHHhee-CCCCHHHHHHHHHHHH
Confidence 788999999998654 4457788877776653
No 219
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=81.57 E-value=12 Score=34.61 Aligned_cols=74 Identities=18% Similarity=0.085 Sum_probs=42.4
Q ss_pred ecCCHHHHHHhhhcCCcEEEEeCCCCCCCHH--------HHHHHHHHHH-hCCCCeEEcCCCCCHHHHHHHHhcCCCeEe
Q 018508 92 LSFSPTLAEISGLAGYDFVVVDMEHGPGGIS--------DALACLHALA-ATGTPAILRLPESCPTWAKKALDLGPQGVM 162 (355)
Q Consensus 92 ~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~--------~a~~~i~a~~-~~g~~~iVRV~~~~~~~i~~aLdaGa~GIm 162 (355)
.+...+.++.+...|+++|-+- |-.+.+.. ...+.++.+. ..+.+.++-..-.....++.++++|+++|.
T Consensus 27 ~~~~~~~a~~~~~~Ga~~i~~~-e~v~~~~~~~~G~~~~~~~~~i~~i~~~~~~Pvi~~~~~~~~~~~~~~~~aGad~v~ 105 (297)
T 2zbt_A 27 DVTTPEQAVIAEEAGAVAVMAL-ERVPADIRAQGGVARMSDPKIIKEIMAAVSIPVMAKVRIGHFVEAMILEAIGVDFID 105 (297)
T ss_dssp EESSHHHHHHHHHHTCSEEEEC-SSCHHHHHHTTCCCCCCCHHHHHHHHTTCSSCEEEEEETTCHHHHHHHHHTTCSEEE
T ss_pred eechHHHHHHHHHCCCcEEEec-cccchHHHhhcCCccCCCHHHHHHHHHhcCCCeEEEeccCCHHHHHHHHHCCCCEEe
Confidence 3445888899999999998762 11111000 0112344443 345555542222246778999999999995
Q ss_pred ecCC
Q 018508 163 FPMI 166 (355)
Q Consensus 163 vP~V 166 (355)
.+.+
T Consensus 106 ~~~~ 109 (297)
T 2zbt_A 106 ESEV 109 (297)
T ss_dssp EETT
T ss_pred eeCC
Confidence 5443
No 220
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=81.50 E-value=33 Score=31.64 Aligned_cols=159 Identities=11% Similarity=-0.059 Sum_probs=82.9
Q ss_pred HHHHHHHHHHHH-hC--CCCeEEcCCCCCHHH----HHHHHhcCCC-eEee----cCC-------CCHHHHHHHHHHcCC
Q 018508 121 ISDALACLHALA-AT--GTPAILRLPESCPTW----AKKALDLGPQ-GVMF----PMI-------DSPEAAKEAVSYCRF 181 (355)
Q Consensus 121 ~~~a~~~i~a~~-~~--g~~~iVRV~~~~~~~----i~~aLdaGa~-GImv----P~V-------esaeea~~vv~a~~~ 181 (355)
.+...+.+.... .. +.+++|=+.+.+... ++++.++|++ +|-+ |.+ .+++.+.+++++++.
T Consensus 76 ~~~~~~~~~~~~~~~~~~~p~~~~i~g~~~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~ 155 (311)
T 1jub_A 76 FDYYLDYVLKNQKENAQEGPIFFSIAGMSAAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFT 155 (311)
T ss_dssp HHHHHHHHHHHHHHTCSSSCCEEEECCSSHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEcCCCCHHHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHH
Confidence 444444444332 23 566777777666543 4556678999 8877 444 267777888887763
Q ss_pred CCCCCCCCcccccccccCCCCccccccCCCceEEEEEEc---cHHHHHHHHHHhccCCccEEEECh-------hhHHh--
Q 018508 182 PPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVE---SEEGVKRAEDIAAVDGVDCVQMGP-------LDLSA-- 249 (355)
Q Consensus 182 pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mIE---T~~av~nieeIaavpgVD~l~iGp-------~DLs~-- 249 (355)
.- .+.+++.|= +.+.+..+-+.+.--|+|+|.+-. -|...
T Consensus 156 ~~----------------------------~~Pv~vKi~~~~~~~~~~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~ 207 (311)
T 1jub_A 156 FF----------------------------TKPLGVKLPPYFDLVHFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAES 207 (311)
T ss_dssp TC----------------------------CSCEEEEECCCCSHHHHHHHHHHHTTSCCCEEEECCCEEEEECEETTTTE
T ss_pred hc----------------------------CCCEEEEECCCCCHHHHHHHHHHHHHcCCcEEEecCCCCcCceeccCCCC
Confidence 20 122333321 344444444444445899987732 12100
Q ss_pred --------hcCCCCCCCCHHHHHHHHHHHHHHHhCCCce--eecccCCchhHHHHHHCCCCEEEecchHH
Q 018508 250 --------SMGYLWDPGHRKVREMMRVAEKGVLGGGKAY--LAGFAMPHDAPLEMKSRGYHMVSGAVDVG 309 (355)
Q Consensus 250 --------slG~~~~~~~p~v~~ai~~iv~aa~a~g~~~--~g~~~~d~~~a~~~~~~G~~~vs~~~D~~ 309 (355)
.-|+.+.+.+|.-.+.+.++.++.. ..+++ .|++ .+++++.+++..|.+.|.++.-..
T Consensus 208 ~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~~~-~~ipvi~~GGI-~~~~da~~~l~~GAd~V~vg~~~l 275 (311)
T 1jub_A 208 VVIKPKDGFGGIGGAYIKPTALANVRAFYTRLK-PEIQIIGTGGI-ETGQDAFEHLLCGATMLQIGTALH 275 (311)
T ss_dssp ESCSGGGGEEEEESGGGHHHHHHHHHHHHTTSC-TTSEEEEESSC-CSHHHHHHHHHHTCSEEEECHHHH
T ss_pred cccccCCCCCccccccccHHHHHHHHHHHHhcC-CCCCEEEECCC-CCHHHHHHHHHcCCCEEEEchHHH
Confidence 0122222223333333333322210 03333 3333 357888888889999999986543
No 221
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=81.49 E-value=14 Score=32.57 Aligned_cols=121 Identities=17% Similarity=0.087 Sum_probs=72.9
Q ss_pred HHhCCCCeEEcCCCCCH--HHHHHHHhcCCCeEeecCCCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCcccccc
Q 018508 131 LAATGTPAILRLPESCP--TWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSN 208 (355)
Q Consensus 131 ~~~~g~~~iVRV~~~~~--~~i~~aLdaGa~GImvP~Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~ 208 (355)
+...+..++||..+.+. ..++++++.|+..|-+..- ++.. .+.++.++. |.-.+|.|
T Consensus 10 l~~~~ii~vi~~~~~~~~~~~~~~l~~gGv~~iel~~k-~~~~-~~~i~~~~~-~~~~~gag------------------ 68 (207)
T 2yw3_A 10 LAESRLLPLLTVRGGEDLLGLARVLEEEGVGALEITLR-TEKG-LEALKALRK-SGLLLGAG------------------ 68 (207)
T ss_dssp HHHHCEEEEECCCSCCCHHHHHHHHHHTTCCEEEEECS-STHH-HHHHHHHTT-SSCEEEEE------------------
T ss_pred HHhCCEEEEEeCCCHHHHHHHHHHHHHcCCCEEEEeCC-ChHH-HHHHHHHhC-CCCEEEeC------------------
Confidence 34567788899877763 3578889999999999864 4444 355555553 31111111
Q ss_pred CCCceEEEEEEccHHHHHHHHHHhccCCccEEEEChhhHHhhcCCCCCCCCHHHHHHHHHHHHHHHhCCCceeecccCCc
Q 018508 209 YEEELLIMCQVESEEGVKRAEDIAAVDGVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVAEKGVLGGGKAYLAGFAMPH 288 (355)
Q Consensus 209 ~n~~i~vi~mIET~~av~nieeIaavpgVD~l~iGp~DLs~slG~~~~~~~p~v~~ai~~iv~aa~a~g~~~~g~~~~d~ 288 (355)
+ .+ +. +.++.-.+. |.|++..|..|. .++++++..|...+-+ +.++
T Consensus 69 ----~----vl-~~---d~~~~A~~~-GAd~v~~~~~d~--------------------~v~~~~~~~g~~~i~G-~~t~ 114 (207)
T 2yw3_A 69 ----T----VR-SP---KEAEAALEA-GAAFLVSPGLLE--------------------EVAALAQARGVPYLPG-VLTP 114 (207)
T ss_dssp ----S----CC-SH---HHHHHHHHH-TCSEEEESSCCH--------------------HHHHHHHHHTCCEEEE-ECSH
T ss_pred ----e----Ee-eH---HHHHHHHHc-CCCEEEcCCCCH--------------------HHHHHHHHhCCCEEec-CCCH
Confidence 1 11 22 333333332 788888664332 2445666667665434 4568
Q ss_pred hhHHHHHHCCCCEEEecc
Q 018508 289 DAPLEMKSRGYHMVSGAV 306 (355)
Q Consensus 289 ~~a~~~~~~G~~~vs~~~ 306 (355)
+++....+.|++++.+-+
T Consensus 115 ~e~~~A~~~Gad~v~~fp 132 (207)
T 2yw3_A 115 TEVERALALGLSALKFFP 132 (207)
T ss_dssp HHHHHHHHTTCCEEEETT
T ss_pred HHHHHHHHCCCCEEEEec
Confidence 888888899999887654
No 222
>3q9s_A DNA-binding response regulator; DNA binding protein; 2.40A {Deinococcus radiodurans}
Probab=81.43 E-value=13 Score=32.97 Aligned_cols=101 Identities=13% Similarity=0.069 Sum_probs=63.2
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhC-CCCeEEcCCCCCHHHHHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAAT-GTPAILRLPESCPTWAKK 152 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~-g~~~iVRV~~~~~~~i~~ 152 (355)
..++..|......+. .-.+..+..+.+....+|.|++|+.-.. ....+.++.++.. ..+++|=....+...+.+
T Consensus 51 ~~l~~~L~~~g~~v~--~~~~~~~al~~~~~~~~DlvllD~~lp~---~~G~~l~~~lr~~~~~~iI~lt~~~~~~~~~~ 125 (249)
T 3q9s_A 51 NVLRMDLTDAGYVVD--HADSAMNGLIKAREDHPDLILLDLGLPD---FDGGDVVQRLRKNSALPIIVLTARDTVEEKVR 125 (249)
T ss_dssp HHHHHHHHTTTCEEE--EESSHHHHHHHHHHSCCSEEEEECCSCH---HHHHHHHHHHHTTCCCCEEEEESCCSHHHHHH
T ss_pred HHHHHHHHHCCCEEE--EeCCHHHHHHHHhcCCCCEEEEcCCCCC---CCHHHHHHHHHcCCCCCEEEEECCCCHHHHHH
Confidence 456666765443333 2233445567777788999999997532 2333444444433 344454445556778899
Q ss_pred HHhcCCCeEeecCCCCHHHHHHHHHHcC
Q 018508 153 ALDLGPQGVMFPMIDSPEAAKEAVSYCR 180 (355)
Q Consensus 153 aLdaGa~GImvP~Vesaeea~~vv~a~~ 180 (355)
++++|+++++. |=-+.+++...++.+.
T Consensus 126 a~~~Ga~~yl~-Kp~~~~~L~~~i~~~l 152 (249)
T 3q9s_A 126 LLGLGADDYLI-KPFHPDELLARVKVQL 152 (249)
T ss_dssp HHHHTCSEEEE-SSCCHHHHHHHHHHHH
T ss_pred HHHCCCcEEEE-CCCCHHHHHHHHHHHH
Confidence 99999999764 4457788877776653
No 223
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=81.37 E-value=8.8 Score=35.09 Aligned_cols=87 Identities=14% Similarity=0.141 Sum_probs=53.8
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHH----HHHHHHHHhC--CCCeEEcCCCCCH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDA----LACLHALAAT--GTPAILRLPESCP 147 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a----~~~i~a~~~~--g~~~iVRV~~~~~ 147 (355)
..+|+.+ .....+|+- ..+++.++.+...|+|+|.+--=.....|+.. .+.++.+... ...|+|=+.+.++
T Consensus 126 ~~~r~~~-~~~~~iG~S--~ht~~Ea~~A~~~GaDyI~vgpvf~T~tK~~~~~~gl~~l~~~~~~~~~~iPvvAiGGI~~ 202 (243)
T 3o63_A 126 NVARQIL-APDTLIGRS--THDPDQVAAAAAGDADYFCVGPCWPTPTKPGRAAPGLGLVRVAAELGGDDKPWFAIGGINA 202 (243)
T ss_dssp HHHHHHS-CTTCEEEEE--ECSHHHHHHHHHSSCSEEEECCSSCCCC-----CCCHHHHHHHHTC---CCCEEEESSCCT
T ss_pred HHHHHhh-CCCCEEEEe--CCCHHHHHHHhhCCCCEEEEcCccCCCCCCCcchhhHHHHHHHHHhccCCCCEEEecCCCH
Confidence 3444443 334566664 47788888888999999999542222223221 1233333322 1345666777788
Q ss_pred HHHHHHHhcCCCeEee
Q 018508 148 TWAKKALDLGPQGVMF 163 (355)
Q Consensus 148 ~~i~~aLdaGa~GImv 163 (355)
..+..++++|++||.+
T Consensus 203 ~ni~~~~~aGa~gvav 218 (243)
T 3o63_A 203 QRLPAVLDAGARRIVV 218 (243)
T ss_dssp TTHHHHHHTTCCCEEE
T ss_pred HHHHHHHHcCCCEEEE
Confidence 8899999999999876
No 224
>2fiq_A Putative tagatose 6-phosphate kinase 1; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics; 2.25A {Escherichia coli} SCOP: c.1.10.7
Probab=81.30 E-value=18 Score=36.01 Aligned_cols=66 Identities=15% Similarity=0.247 Sum_probs=38.8
Q ss_pred cCCchhHHHHHHCCCCEEEecchHHHH-HHHHHHHHHHHHHhcCCCCCCCCCCchhHHhhhhccccccccC
Q 018508 285 AMPHDAPLEMKSRGYHMVSGAVDVGLF-RSAAVEDVARFKMNLTDDADDDDDDDDDAWRERIKDADDKYWS 354 (355)
Q Consensus 285 ~~d~~~a~~~~~~G~~~vs~~~D~~ll-~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (355)
+.+.+..+++++.|+.-+-++++..+. ++++.+ +..+-..+.. ..+.+.-.+.-.+.+++ +.|||.
T Consensus 261 g~~~e~l~~~v~~Gi~kiNV~t~l~~a~~~al~~-l~~ie~~l~~--~~~~~~l~~~~~~~m~~-~~~~w~ 327 (420)
T 2fiq_A 261 YQTRTAYWELVRDHFAILKVGPALTFALREAIFA-LAQIEQELIA--PENRSGCLAVIEEVMLD-EPQYWK 327 (420)
T ss_dssp TCCHHHHHHHHHTTEEEEEECHHHHHHHHHHHHH-HHHHHHHHSC--TTTCCCHHHHHHHHHHH-SGGGTT
T ss_pred CCCHHHHHHHHHcCCCEEEECHHHHHHHHHHHHH-HHHhhhhhcc--ccchhhhHHHHHHHHHH-hHHHHH
Confidence 345677899999999999999999876 555544 3333333221 12222232333344444 667774
No 225
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=81.18 E-value=10 Score=36.39 Aligned_cols=63 Identities=8% Similarity=0.025 Sum_probs=40.7
Q ss_pred HHHhhhc--CCcEEEEeCCCCCCCHHHHHHHHHHHHh-C-CCCeEEcCCCCCHHHHHHHHhcCCCeEeec
Q 018508 99 AEISGLA--GYDFVVVDMEHGPGGISDALACLHALAA-T-GTPAILRLPESCPTWAKKALDLGPQGVMFP 164 (355)
Q Consensus 99 ~e~aa~~--G~D~vilDlEh~~~~~~~a~~~i~a~~~-~-g~~~iVRV~~~~~~~i~~aLdaGa~GImvP 164 (355)
++.+... |+|++.+|+-++. .....+.++.++. . +.++++. +-.+....+++.++|+++|.+-
T Consensus 123 ~~~l~~~~~g~~~i~i~~~~g~--~~~~~~~i~~lr~~~~~~~vi~g-~v~t~e~A~~a~~aGaD~I~v~ 189 (351)
T 2c6q_A 123 LEQILEAIPQVKYICLDVANGY--SEHFVEFVKDVRKRFPQHTIMAG-NVVTGEMVEELILSGADIIKVG 189 (351)
T ss_dssp HHHHHHHCTTCCEEEEECSCTT--BHHHHHHHHHHHHHCTTSEEEEE-EECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHhccCCCCEEEEEecCCC--cHHHHHHHHHHHHhcCCCeEEEE-eCCCHHHHHHHHHhCCCEEEEC
Confidence 3344444 8999999987652 2334455555543 3 5566654 2345778899999999999773
No 226
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=81.10 E-value=2.4 Score=33.29 Aligned_cols=103 Identities=10% Similarity=-0.007 Sum_probs=59.2
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHh-CCCCeEEcCCCCCHHHHHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAA-TGTPAILRLPESCPTWAKK 152 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~-~g~~~iVRV~~~~~~~i~~ 152 (355)
..+++.|..-... +..-.+..+..+.+....+|.|++|++-...+--++...++.... ...++++=....+......
T Consensus 21 ~~l~~~L~~~g~~--v~~~~~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~~~~~~~~~~ 98 (142)
T 3cg4_A 21 IAVKTILSDAGFH--IISADSGGQCIDLLKKGFSGVVLLDIMMPGMDGWDTIRAILDNSLEQGIAIVMLTAKNAPDAKMI 98 (142)
T ss_dssp HHHHHHHHHTTCE--EEEESSHHHHHHHHHTCCCEEEEEESCCSSSCHHHHHHHHHHTTCCTTEEEEEEECTTCCCCSST
T ss_pred HHHHHHHHHCCeE--EEEeCCHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhcccCCCCEEEEECCCCHHHHHH
Confidence 4566777653332 222233344566677778999999998765443333333333111 2234444444444445667
Q ss_pred HHhcCCCeEeecCCCCHHHHHHHHHHc
Q 018508 153 ALDLGPQGVMFPMIDSPEAAKEAVSYC 179 (355)
Q Consensus 153 aLdaGa~GImvP~Vesaeea~~vv~a~ 179 (355)
+++.|+++++ ++--+.+++...++.+
T Consensus 99 ~~~~g~~~~l-~kp~~~~~l~~~i~~~ 124 (142)
T 3cg4_A 99 GLQEYVVDYI-TKPFDNEDLIEKTTFF 124 (142)
T ss_dssp TGGGGEEEEE-ESSCCHHHHHHHHHHH
T ss_pred HHhcCccEEE-eCCCCHHHHHHHHHHH
Confidence 8889998865 4555778877666554
No 227
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=80.92 E-value=8.5 Score=38.72 Aligned_cols=72 Identities=28% Similarity=0.159 Sum_probs=47.3
Q ss_pred ecCCHHHHHHhhhcCCcEEEEeCCCCCC------------CHHHHHHHHHHHHhCCCCeEEcCCCC-CHHHHHHHHhcCC
Q 018508 92 LSFSPTLAEISGLAGYDFVVVDMEHGPG------------GISDALACLHALAATGTPAILRLPES-CPTWAKKALDLGP 158 (355)
Q Consensus 92 ~~~sp~~~e~aa~~G~D~vilDlEh~~~------------~~~~a~~~i~a~~~~g~~~iVRV~~~-~~~~i~~aLdaGa 158 (355)
+..+++.++.+..+|+|+|.+-...+.. ......++..+++..+.+++. -.+. ++..+.++|.+||
T Consensus 277 ~v~t~e~a~~l~~aGaD~I~vg~g~Gs~~~t~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa-~GGI~~~~di~kal~~GA 355 (490)
T 4avf_A 277 NIATAEAAKALAEAGADAVKVGIGPGSICTTRIVAGVGVPQISAIANVAAALEGTGVPLIA-DGGIRFSGDLAKAMVAGA 355 (490)
T ss_dssp EECSHHHHHHHHHTTCSEEEECSSCSTTCHHHHHTCBCCCHHHHHHHHHHHHTTTTCCEEE-ESCCCSHHHHHHHHHHTC
T ss_pred eeCcHHHHHHHHHcCCCEEEECCCCCcCCCccccCCCCccHHHHHHHHHHHhccCCCcEEE-eCCCCCHHHHHHHHHcCC
Confidence 4678899999999999999984433221 122223344444344555543 2233 4778999999999
Q ss_pred CeEeec
Q 018508 159 QGVMFP 164 (355)
Q Consensus 159 ~GImvP 164 (355)
++||+=
T Consensus 356 d~V~vG 361 (490)
T 4avf_A 356 YCVMMG 361 (490)
T ss_dssp SEEEEC
T ss_pred Ceeeec
Confidence 999984
No 228
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=80.85 E-value=19 Score=28.47 Aligned_cols=103 Identities=15% Similarity=0.153 Sum_probs=62.8
Q ss_pred hHHHHHHHc-CCcEEEEEEecCCH-HHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHH
Q 018508 74 ESLKYRLQS-NETLYGLFLLSFSP-TLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAK 151 (355)
Q Consensus 74 n~lk~~L~~-G~~~~gl~v~~~sp-~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~ 151 (355)
..+++.|.. .. +.......+. +..+.+....+|.|++|++-...+-.++...++.. ....++++=....+.....
T Consensus 19 ~~l~~~L~~~~~--~~v~~~~~~~~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~-~~~~~ii~ls~~~~~~~~~ 95 (153)
T 3cz5_A 19 EGYRRLIERRPG--YAVVAEAADAGEAYRLYRETTPDIVVMDLTLPGPGGIEATRHIRQW-DGAARILIFTMHQGSAFAL 95 (153)
T ss_dssp HHHHHHHTTSTT--EEEEEEESSHHHHHHHHHTTCCSEEEECSCCSSSCHHHHHHHHHHH-CTTCCEEEEESCCSHHHHH
T ss_pred HHHHHHHhhCCC--cEEEEEeCCHHHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHh-CCCCeEEEEECCCCHHHHH
Confidence 456667764 22 2222123343 45566677789999999987654433443444332 2345555555566677788
Q ss_pred HHHhcCCCeEeecCCCCHHHHHHHHHHcC
Q 018508 152 KALDLGPQGVMFPMIDSPEAAKEAVSYCR 180 (355)
Q Consensus 152 ~aLdaGa~GImvP~Vesaeea~~vv~a~~ 180 (355)
+++..|+++++. +--+.+++...++.+.
T Consensus 96 ~~~~~g~~~~l~-kp~~~~~L~~~i~~~~ 123 (153)
T 3cz5_A 96 KAFEAGASGYVT-KSSDPAELVQAIEAIL 123 (153)
T ss_dssp HHHHTTCSEEEE-TTSCTTHHHHHHHHHT
T ss_pred HHHHCCCcEEEe-cCCCHHHHHHHHHHHH
Confidence 999999998754 4445677777776653
No 229
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=80.82 E-value=19 Score=33.83 Aligned_cols=105 Identities=17% Similarity=0.184 Sum_probs=67.4
Q ss_pred CchHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEe---------CCCC-CCCHHHHHHHHHHH-HhCCCCeEE
Q 018508 72 SPESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVD---------MEHG-PGGISDALACLHAL-AATGTPAIL 140 (355)
Q Consensus 72 ~~n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilD---------lEh~-~~~~~~a~~~i~a~-~~~g~~~iV 140 (355)
....|+++.++|+++. .++.-+...+..+..+|+|.|++- .++. +.+.+++....+++ +....+++|
T Consensus 22 t~~~lr~~k~~g~~i~--~~tayDa~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vv 99 (281)
T 1oy0_A 22 RTHHLQRWKADGHKWA--MLTAYDYSTARIFDEAGIPVLLVGDSAANVVYGYDTTVPISIDELIPLVRGVVRGAPHALVV 99 (281)
T ss_dssp CHHHHHHHHHHTCCEE--EEECCSHHHHHHHHTTTCCEEEECTTHHHHTTCCSSSSSCCGGGTHHHHHHHHHHCTTSEEE
T ss_pred CHHHHHHHHhCCCcEE--EEeCcCHHHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhcCCCCeEE
Confidence 5678999999999854 345678889999999999998762 1111 34556665555554 344545544
Q ss_pred -cCCCC----CHHH----HHHHHh-cCCCeEeecCC-CCHHHHHHHHHH
Q 018508 141 -RLPES----CPTW----AKKALD-LGPQGVMFPMI-DSPEAAKEAVSY 178 (355)
Q Consensus 141 -RV~~~----~~~~----i~~aLd-aGa~GImvP~V-esaeea~~vv~a 178 (355)
=.+-. ++.. ..++++ +|+++|-+=-- +-++.++.++++
T Consensus 100 aD~pfgsy~~s~~~a~~na~rl~~eaGa~aVklEdg~e~~~~I~al~~a 148 (281)
T 1oy0_A 100 ADLPFGSYEAGPTAALAAATRFLKDGGAHAVKLEGGERVAEQIACLTAA 148 (281)
T ss_dssp EECCTTSSTTCHHHHHHHHHHHHHTTCCSEEEEEBSGGGHHHHHHHHHH
T ss_pred EECCCCcccCCHHHHHHHHHHHHHHhCCeEEEECCcHHHHHHHHHHHHC
Confidence 33432 3443 356676 99999987543 445556666553
No 230
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=80.71 E-value=4.9 Score=36.58 Aligned_cols=116 Identities=22% Similarity=0.195 Sum_probs=72.5
Q ss_pred HHHhhhcCCcEEEEeCCCCC--CCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHHHhcCCCeEeec-----------C
Q 018508 99 AEISGLAGYDFVVVDMEHGP--GGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFP-----------M 165 (355)
Q Consensus 99 ~e~aa~~G~D~vilDlEh~~--~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~aLdaGa~GImvP-----------~ 165 (355)
++.+...|+|+|+|- |+- ....+....+..+...|..++|=|.+ +.....++..++.-|-+= +
T Consensus 78 ~~~l~~~Ga~~Vllg--hseRR~~~~e~~~k~~~A~~~GL~~ivcVge--~~e~~~~~~~~~~iIayep~waiGtG~~v~ 153 (226)
T 1w0m_A 78 LENIKEAGGSGVILN--HSEAPLKLNDLARLVAKAKSLGLDVVVCAPD--PRTSLAAAALGPHAVAVEPPELIGTGRAVS 153 (226)
T ss_dssp HHHHHHHTCCEEEEC--CTTSCCBHHHHHHHHHHHHHTTCEEEEEESS--HHHHHHHHHTCCSEEEECCGGGTTTSCCHH
T ss_pred HHHHHHcCCCEEEEe--eeeccCCHHHHHHHHHHHHHCCCEEEEEeCC--HHHHHHHhcCCCCEEEEcChhhhccCCCCC
Confidence 677888999999965 443 55666777788888899999998876 444556666666432220 2
Q ss_pred CCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEEccHHHHHHHHHHhccCCccEEEEChh
Q 018508 166 IDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKRAEDIAAVDGVDCVQMGPL 245 (355)
Q Consensus 166 Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mIET~~av~nieeIaavpgVD~l~iGp~ 245 (355)
.-++++++...+.++..|.+. .+.-..-|-+. |.-+++..+++|++.+|..
T Consensus 154 t~~~d~~~~~~~~ir~~~~~~-------------------------~ilyggsV~~~----n~~~~~~~~giDG~LVG~a 204 (226)
T 1w0m_A 154 RYKPEAIVETVGLVSRHFPEV-------------------------SVITGAGIESG----DDVAAALRLGTRGVLLASA 204 (226)
T ss_dssp HHCHHHHHHHHHHHHHHCTTS-------------------------EEEEESSCCSH----HHHHHHHHTTCSEEEECHH
T ss_pred CCChhHHHHHHHHHHhccCCC-------------------------EEEEeCCCCcH----HHHHHHHhCCCCEEEECHH
Confidence 345677777766665422111 11112224344 3444555679999999976
Q ss_pred hH
Q 018508 246 DL 247 (355)
Q Consensus 246 DL 247 (355)
=|
T Consensus 205 ~l 206 (226)
T 1w0m_A 205 AV 206 (226)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 231
>2r25_B Osmosensing histidine protein kinase SLN1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: c.23.1.1 PDB: 1oxk_B 1oxb_B
Probab=80.70 E-value=18 Score=28.09 Aligned_cols=104 Identities=12% Similarity=0.010 Sum_probs=60.4
Q ss_pred hHHHHHHHc-CCcEEEEEEecCCHHHHHHhhh-----cCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCH
Q 018508 74 ESLKYRLQS-NETLYGLFLLSFSPTLAEISGL-----AGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCP 147 (355)
Q Consensus 74 n~lk~~L~~-G~~~~gl~v~~~sp~~~e~aa~-----~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~ 147 (355)
..++..|.. |-..+... .+..+..+.+.. ..+|.|++|+.-...+--++...++.......++++=....+.
T Consensus 16 ~~l~~~L~~~g~~~v~~~--~~~~~al~~~~~~~~~~~~~dlvllD~~mp~~~G~~~~~~lr~~~~~~~~ii~lt~~~~~ 93 (133)
T 2r25_B 16 EVIKRMLNLEGIENIELA--CDGQEAFDKVKELTSKGENYNMIFMDVQMPKVDGLLSTKMIRRDLGYTSPIVALTAFADD 93 (133)
T ss_dssp HHHHHHHHHTTCCCEEEE--SSHHHHHHHHHHHHHHTCCCSEEEECSCCSSSCHHHHHHHHHHHSCCCSCEEEEESCCSH
T ss_pred HHHHHHHHHcCCceEEEE--CCHHHHHHHHHHHHhcCCCCCEEEEeCCCCCCChHHHHHHHHhhcCCCCCEEEEECCCCH
Confidence 346666654 32223322 223344555544 5699999999875444333333444321223444444444566
Q ss_pred HHHHHHHhcCCCeEeecCCCCHHHHHHHHHHcC
Q 018508 148 TWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCR 180 (355)
Q Consensus 148 ~~i~~aLdaGa~GImvP~Vesaeea~~vv~a~~ 180 (355)
....++++.|+++.+ +|=-+.+++..+++.+.
T Consensus 94 ~~~~~~~~~ga~~~l-~KP~~~~~L~~~l~~~~ 125 (133)
T 2r25_B 94 SNIKECLESGMNGFL-SKPIKRPKLKTILTEFC 125 (133)
T ss_dssp HHHHHHHHTTCSEEE-ESSCCHHHHHHHHHHHC
T ss_pred HHHHHHHHcCCCEEE-eCCCCHHHHHHHHHHHH
Confidence 778899999998865 44457888887777653
No 232
>1p2f_A Response regulator; DRRB, OMPR/PHOB, transcription; HET: MSE; 1.80A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nns_A*
Probab=80.52 E-value=14 Score=31.46 Aligned_cols=98 Identities=14% Similarity=0.028 Sum_probs=58.6
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHH-HHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPT-LAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKK 152 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~-~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~ 152 (355)
..+++.|..-. .+. ...+.. ..+.+ ..+|.|++|+.-...+--++...++.. ....++++=....+...+.+
T Consensus 16 ~~l~~~L~~~~-~v~---~~~~~~~al~~~--~~~dlvllD~~lp~~~g~~~~~~lr~~-~~~~~ii~lt~~~~~~~~~~ 88 (220)
T 1p2f_A 16 KKVSEKLQQLG-RVK---TFLTGEDFLNDE--EAFHVVVLDVMLPDYSGYEICRMIKET-RPETWVILLTLLSDDESVLK 88 (220)
T ss_dssp HHHHHHHTTTE-EEE---EESSHHHHHHCC--SCCSEEEEESBCSSSBHHHHHHHHHHH-CTTSEEEEEESCCSHHHHHH
T ss_pred HHHHHHHHhCC-CEE---EECCHHHHHHhc--CCCCEEEEeCCCCCCCHHHHHHHHHhc-CCCCcEEEEEcCCCHHHHHH
Confidence 34666665432 222 234444 33434 679999999987544433333333332 13444555445556777889
Q ss_pred HHhcCCCeEeecCCCCHHHHHHHHHHc
Q 018508 153 ALDLGPQGVMFPMIDSPEAAKEAVSYC 179 (355)
Q Consensus 153 aLdaGa~GImvP~Vesaeea~~vv~a~ 179 (355)
+++.|+++++ ++--+.+++...++.+
T Consensus 89 ~~~~ga~~~l-~Kp~~~~~L~~~i~~~ 114 (220)
T 1p2f_A 89 GFEAGADDYV-TKPFNPEILLARVKRF 114 (220)
T ss_dssp HHHHTCSEEE-ESSCCHHHHHHHHHHH
T ss_pred HHHcCCCEEE-ECCCCHHHHHHHHHHH
Confidence 9999999975 4555788887777655
No 233
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=80.51 E-value=4.1 Score=35.64 Aligned_cols=61 Identities=16% Similarity=0.163 Sum_probs=40.9
Q ss_pred cCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHHHhcCCCeEee
Q 018508 93 SFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMF 163 (355)
Q Consensus 93 ~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~aLdaGa~GImv 163 (355)
..++..++.+...|+|+|.+... +. ..++.++..|...++-+ .++..+.++.+.|++.|.+
T Consensus 67 ~~~~~~i~~a~~~Gad~V~~~~~----~~----~~~~~~~~~g~~~~~g~--~t~~e~~~a~~~G~d~v~v 127 (212)
T 2v82_A 67 VLKPEQVDALARMGCQLIVTPNI----HS----EVIRRAVGYGMTVCPGC--ATATEAFTALEAGAQALKI 127 (212)
T ss_dssp CCSHHHHHHHHHTTCCEEECSSC----CH----HHHHHHHHTTCEEECEE--CSHHHHHHHHHTTCSEEEE
T ss_pred ccCHHHHHHHHHcCCCEEEeCCC----CH----HHHHHHHHcCCCEEeec--CCHHHHHHHHHCCCCEEEE
Confidence 45678899999999999974332 22 23344444565544432 3566778889999999875
No 234
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=80.47 E-value=14 Score=35.58 Aligned_cols=72 Identities=24% Similarity=0.270 Sum_probs=46.9
Q ss_pred ecCCHHHHHHhhhcCCcEEEEeCCCCC------------CCHHHHHHHHHHHHhCCCCeEE--cCCCCCHHHHHHHHhcC
Q 018508 92 LSFSPTLAEISGLAGYDFVVVDMEHGP------------GGISDALACLHALAATGTPAIL--RLPESCPTWAKKALDLG 157 (355)
Q Consensus 92 ~~~sp~~~e~aa~~G~D~vilDlEh~~------------~~~~~a~~~i~a~~~~g~~~iV--RV~~~~~~~i~~aLdaG 157 (355)
...+++.++.+..+|+|+|++-..-+. .....+..+..++...+.+++. .|. ++..+.++|.+|
T Consensus 168 ~v~t~e~A~~a~~aGaD~I~v~~g~G~~~~~r~~~g~~~p~~~~l~~v~~~~~~~~ipvIa~GGI~--~g~di~kAlalG 245 (351)
T 2c6q_A 168 NVVTGEMVEELILSGADIIKVGIGPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCS--CPGDVAKAFGAG 245 (351)
T ss_dssp EECSHHHHHHHHHTTCSEEEECSSCSTTBCHHHHHCBCCCHHHHHHHHHHHHHHTTCEEEEESCCC--SHHHHHHHHHTT
T ss_pred eCCCHHHHHHHHHhCCCEEEECCCCCcCcCccccCCCCccHHHHHHHHHHHHhhcCCcEEEeCCCC--CHHHHHHHHHcC
Confidence 456899999999999999988643221 1112223333333344566554 333 477899999999
Q ss_pred CCeEeecC
Q 018508 158 PQGVMFPM 165 (355)
Q Consensus 158 a~GImvP~ 165 (355)
|++|++=.
T Consensus 246 A~~V~vG~ 253 (351)
T 2c6q_A 246 ADFVMLGG 253 (351)
T ss_dssp CSEEEEST
T ss_pred CCceeccH
Confidence 99998743
No 235
>2gwr_A DNA-binding response regulator MTRA; two-component regulatory system, transcription regulation, phosphorylation, OMPR family; 2.10A {Mycobacterium tuberculosis} PDB: 3nhz_A
Probab=80.09 E-value=8 Score=33.68 Aligned_cols=102 Identities=15% Similarity=0.060 Sum_probs=61.7
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKA 153 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~a 153 (355)
..+++.|......+. .-.+..+..+.+....+|.|++|+.-...+--++...++. ....++++=....+...+..+
T Consensus 19 ~~l~~~L~~~g~~v~--~~~~~~~al~~l~~~~~dlvilD~~l~~~~g~~~~~~lr~--~~~~~ii~lt~~~~~~~~~~~ 94 (238)
T 2gwr_A 19 EMLTIVLRGEGFDTA--VIGDGTQALTAVRELRPDLVLLDLMLPGMNGIDVCRVLRA--DSGVPIVMLTAKTDTVDVVLG 94 (238)
T ss_dssp HHHHHHHHHTTCEEE--EECCGGGHHHHHHHHCCSEEEEESSCSSSCHHHHHHHHHT--TCCCCEEEEEETTCCSCHHHH
T ss_pred HHHHHHHHHCCCEEE--EECCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHh--CCCCcEEEEeCCCCHHHHHHH
Confidence 456677765333332 2233445566777778999999998654443333333332 124555544444455567889
Q ss_pred HhcCCCeEeecCCCCHHHHHHHHHHcC
Q 018508 154 LDLGPQGVMFPMIDSPEAAKEAVSYCR 180 (355)
Q Consensus 154 LdaGa~GImvP~Vesaeea~~vv~a~~ 180 (355)
++.|+++++ ++--+.+++...++.+.
T Consensus 95 ~~~Ga~~~l-~Kp~~~~~L~~~i~~~~ 120 (238)
T 2gwr_A 95 LESGADDYI-MKPFKPKELVARVRARL 120 (238)
T ss_dssp HHTTCCEEE-EESCCHHHHHHHHHHHC
T ss_pred HHCCCCEEE-eCCCCHHHHHHHHHHHH
Confidence 999999875 44457888887777653
No 236
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=79.63 E-value=8.8 Score=30.21 Aligned_cols=100 Identities=14% Similarity=0.112 Sum_probs=59.9
Q ss_pred hHHHHHHHc-CCcEEEEEEecCCHHHHHHhhh--cCCcEEEEeCCCCCCCHHHHHHHHHHHH--hCCCCeEEcCCCCCHH
Q 018508 74 ESLKYRLQS-NETLYGLFLLSFSPTLAEISGL--AGYDFVVVDMEHGPGGISDALACLHALA--ATGTPAILRLPESCPT 148 (355)
Q Consensus 74 n~lk~~L~~-G~~~~gl~v~~~sp~~~e~aa~--~G~D~vilDlEh~~~~~~~a~~~i~a~~--~~g~~~iVRV~~~~~~ 148 (355)
..+++.|.. |... +..-.+..+.+..+.. ..+|.|++|+.-... ...+.++.++ ....+++|=....+..
T Consensus 34 ~~l~~~L~~~g~~~--v~~~~~~~~~~~~~~~~~~~~dlvi~D~~l~~~---~g~~~~~~l~~~~~~~~ii~lt~~~~~~ 108 (146)
T 4dad_A 34 AHLARLVGDAGRYR--VTRTVGRAAQIVQRTDGLDAFDILMIDGAALDT---AELAAIEKLSRLHPGLTCLLVTTDASSQ 108 (146)
T ss_dssp HHHHHHHHHHCSCE--EEEECCCHHHHTTCHHHHTTCSEEEEECTTCCH---HHHHHHHHHHHHCTTCEEEEEESCCCHH
T ss_pred HHHHHHHhhCCCeE--EEEeCCHHHHHHHHHhcCCCCCEEEEeCCCCCc---cHHHHHHHHHHhCCCCcEEEEeCCCCHH
Confidence 356666654 3232 2223344445555554 789999999986432 2233333332 2234445444555677
Q ss_pred HHHHHHhcCCCeEeecCCCCHHHHHHHHHHc
Q 018508 149 WAKKALDLGPQGVMFPMIDSPEAAKEAVSYC 179 (355)
Q Consensus 149 ~i~~aLdaGa~GImvP~Vesaeea~~vv~a~ 179 (355)
.+.+++.+|+++++ +|=-+.+++...++.+
T Consensus 109 ~~~~~~~~ga~~~l-~Kp~~~~~L~~~i~~~ 138 (146)
T 4dad_A 109 TLLDAMRAGVRDVL-RWPLEPRALDDALKRA 138 (146)
T ss_dssp HHHHHHTTTEEEEE-ESSCCHHHHHHHHHHH
T ss_pred HHHHHHHhCCceeE-cCCCCHHHHHHHHHHH
Confidence 78899999998864 4445788888777665
No 237
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=79.59 E-value=9.3 Score=34.02 Aligned_cols=84 Identities=13% Similarity=-0.115 Sum_probs=59.9
Q ss_pred EecCCHHHHHHhhhcCCcEEEEeC-CCCC--CCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHHH-hcCCCeEeecCC
Q 018508 91 LLSFSPTLAEISGLAGYDFVVVDM-EHGP--GGISDALACLHALAATGTPAILRLPESCPTWAKKAL-DLGPQGVMFPMI 166 (355)
Q Consensus 91 v~~~sp~~~e~aa~~G~D~vilDl-Eh~~--~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~aL-daGa~GImvP~V 166 (355)
+.+.+++.++.+..+|+|++=|-. +.+| .+.++++.++..+...-..+-|=+|. +...+..++ ..+.+.|.+---
T Consensus 6 CGit~~eda~~a~~~GaD~iGfif~~~SpR~V~~~~a~~i~~~~~~~~~~VgVfvn~-~~~~i~~~~~~~~ld~vQLHG~ 84 (203)
T 1v5x_A 6 CGITRLEDALLAEALGAFALGFVLAPGSRRRIAPEAARAIGEALGPFVVRVGVFRDQ-PPEEVLRLMEEARLQVAQLHGE 84 (203)
T ss_dssp CCCCCHHHHHHHHHHTCSEEEEECCTTCTTBCCHHHHHHHHHHSCSSSEEEEEESSC-CHHHHHHHHHHTTCSEEEECSC
T ss_pred cCCCcHHHHHHHHHcCCCEEEEEecCCCCCcCCHHHHHHHHHhCCCCCCEEEEEeCC-CHHHHHHHHHhhCCCEEEECCC
Confidence 456799999999999999976664 6665 56788888876543222334443444 455565544 578999999888
Q ss_pred CCHHHHHHH
Q 018508 167 DSPEAAKEA 175 (355)
Q Consensus 167 esaeea~~v 175 (355)
++++.++++
T Consensus 85 e~~~~~~~l 93 (203)
T 1v5x_A 85 EPPEWAEAV 93 (203)
T ss_dssp CCHHHHHHH
T ss_pred CCHHHHHHh
Confidence 999988775
No 238
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=79.37 E-value=65 Score=35.13 Aligned_cols=66 Identities=15% Similarity=0.106 Sum_probs=44.8
Q ss_pred HHHHhhhcCCcEEEEeCCCC--C----------CCHHHHHHHHHHHHh-CCCCeEEcCCCC--CH-HHHHHHHhcCCCeE
Q 018508 98 LAEISGLAGYDFVVVDMEHG--P----------GGISDALACLHALAA-TGTPAILRLPES--CP-TWAKKALDLGPQGV 161 (355)
Q Consensus 98 ~~e~aa~~G~D~vilDlEh~--~----------~~~~~a~~~i~a~~~-~g~~~iVRV~~~--~~-~~i~~aLdaGa~GI 161 (355)
.++.+...|+|+|.|.+--- + .+.+.+.+++++++. .+.+++|++... +. ...+.+.++|+++|
T Consensus 653 ~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~~~Pv~vK~~~~~~~~~~~a~~~~~~G~d~i 732 (1025)
T 1gte_A 653 LSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQIPFFAKLTPNVTDIVSIARAAKEGGADGV 732 (1025)
T ss_dssp HHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHCSSCEEEEECSCSSCHHHHHHHHHHHTCSEE
T ss_pred HHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHhhCCceEEEeCCChHHHHHHHHHHHHcCCCEE
Confidence 33445568999999987421 0 234556667777653 478999988653 22 33577789999999
Q ss_pred ee
Q 018508 162 MF 163 (355)
Q Consensus 162 mv 163 (355)
.+
T Consensus 733 ~v 734 (1025)
T 1gte_A 733 TA 734 (1025)
T ss_dssp EE
T ss_pred EE
Confidence 88
No 239
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=79.21 E-value=7.8 Score=33.21 Aligned_cols=85 Identities=12% Similarity=0.089 Sum_probs=51.0
Q ss_pred CCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHHHhcCCCeEeecC--CCCHHH
Q 018508 94 FSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPM--IDSPEA 171 (355)
Q Consensus 94 ~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~aLdaGa~GImvP~--Vesaee 171 (355)
+..+..+.+...++|.+++|+.-...+--++...++.... ..++.|=+.......+.++++.|++++++.- ++..+-
T Consensus 13 ~~~~a~~~~~~~~~dlvl~D~~~p~~~g~~~~~~l~~~~~-~~~i~vi~~~~~~~~~~~~~~~Ga~~~l~kp~~~~~~~l 91 (237)
T 3cwo_X 13 NGREAVEKYKELKPDIVTMDITMPEMNGIDAIKEIMKIDP-NAKIIVCSAMGQQAMVIEAIKAGAKDFIVNTAAVENPSL 91 (237)
T ss_dssp SSSTTHHHHHHHCCSCEEEECCSTTSSHHHHHHHHHHHSS-SCCEEEECCSSTHHHHHHHHHTTCCEEEESHHHHHCTHH
T ss_pred CHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHhCC-CCCEEEEECCCCHHHHHHHHHCCHHheEeCCcccChHHH
Confidence 3445667777788999999998654443333333433221 2222222333346678899999999988753 455555
Q ss_pred HHHHHHHc
Q 018508 172 AKEAVSYC 179 (355)
Q Consensus 172 a~~vv~a~ 179 (355)
+..+.+..
T Consensus 92 ~~~i~~~~ 99 (237)
T 3cwo_X 92 ITQIAQTF 99 (237)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 55555544
No 240
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=79.14 E-value=8.1 Score=33.78 Aligned_cols=57 Identities=21% Similarity=0.128 Sum_probs=36.2
Q ss_pred HHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHHHhcCCCeEee
Q 018508 98 LAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMF 163 (355)
Q Consensus 98 ~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~aLdaGa~GImv 163 (355)
.++.+...|+|+|.+-.++ .....+++ ..+. .++.+...++..+.++.+.|++.|++
T Consensus 86 ~~~~a~~~gad~v~l~~~~--~~~~~~~~------~~g~-~~~~~s~~t~~e~~~a~~~g~d~v~~ 142 (227)
T 2tps_A 86 DVELALNLKADGIHIGQED--ANAKEVRA------AIGD-MILGVSAHTMSEVKQAEEDGADYVGL 142 (227)
T ss_dssp CHHHHHHHTCSEEEECTTS--SCHHHHHH------HHTT-SEEEEEECSHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHcCCCEEEECCCc--cCHHHHHH------hcCC-cEEEEecCCHHHHHHHHhCCCCEEEE
Confidence 4677888899999984333 23222222 1233 45555445566688888999999986
No 241
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=78.90 E-value=6.1 Score=34.74 Aligned_cols=127 Identities=19% Similarity=0.129 Sum_probs=68.1
Q ss_pred CCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCC-----------eEEcCCCC------
Q 018508 83 NETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTP-----------AILRLPES------ 145 (355)
Q Consensus 83 G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~-----------~iVRV~~~------ 145 (355)
+-|++ .-..+.+++.++.+..+|+|+|.+-.+.- .+.+...+.++........ ..|.+...
T Consensus 77 ~ipvi-~~g~i~~~~~~~~~~~~Gad~V~i~~~~~-~~~~~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~~~~~~~~~ 154 (253)
T 1h5y_A 77 SIPVL-VGGGVRSLEDATTLFRAGADKVSVNTAAV-RNPQLVALLAREFGSQSTVVAIDAKWNGEYYEVYVKGGREATGL 154 (253)
T ss_dssp SSCEE-EESSCCSHHHHHHHHHHTCSEEEESHHHH-HCTHHHHHHHHHHCGGGEEEEEEEEECSSSEEEEETTTTEEEEE
T ss_pred CCCEE-EECCCCCHHHHHHHHHcCCCEEEEChHHh-hCcHHHHHHHHHcCCCcEEEEEEeecCCCcEEEEEeCCeecCCC
Confidence 34444 23346788889999999999999875432 1122233333322100000 13333221
Q ss_pred CH-HHHHHHHhcCCCeEeecCCC--------CHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEE
Q 018508 146 CP-TWAKKALDLGPQGVMFPMID--------SPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIM 216 (355)
Q Consensus 146 ~~-~~i~~aLdaGa~GImvP~Ve--------saeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi 216 (355)
++ ..++.+.+.|++.|.+--++ +.+.++++.+.+..| +...
T Consensus 155 ~~~e~~~~~~~~G~d~i~~~~~~~~g~~~~~~~~~i~~l~~~~~~p------------------------------via~ 204 (253)
T 1h5y_A 155 DAVKWAKEVEELGAGEILLTSIDRDGTGLGYDVELIRRVADSVRIP------------------------------VIAS 204 (253)
T ss_dssp EHHHHHHHHHHHTCSEEEEEETTTTTTCSCCCHHHHHHHHHHCSSC------------------------------EEEE
T ss_pred CHHHHHHHHHhCCCCEEEEecccCCCCcCcCCHHHHHHHHHhcCCC------------------------------EEEe
Confidence 22 45778889999998773332 344455555443211 2222
Q ss_pred EEEccHHHHHHHHHHhccCCccEEEEChh
Q 018508 217 CQVESEEGVKRAEDIAAVDGVDCVQMGPL 245 (355)
Q Consensus 217 ~mIET~~av~nieeIaavpgVD~l~iGp~ 245 (355)
--|.++ +++.++.+ -|+|++++|.+
T Consensus 205 GGi~~~---~~~~~~~~-~Ga~~v~vgsa 229 (253)
T 1h5y_A 205 GGAGRV---EHFYEAAA-AGADAVLAASL 229 (253)
T ss_dssp SCCCSH---HHHHHHHH-TTCSEEEESHH
T ss_pred CCCCCH---HHHHHHHH-cCCcHHHHHHH
Confidence 234454 45555554 38999999986
No 242
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=78.87 E-value=8 Score=30.38 Aligned_cols=101 Identities=11% Similarity=0.089 Sum_probs=59.3
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhhh-cCCcEEEEeCCCCC-CCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISGL-AGYDFVVVDMEHGP-GGISDALACLHALAATGTPAILRLPESCPTWAK 151 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~-~G~D~vilDlEh~~-~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~ 151 (355)
..+++.|..-...+ ..-.+..+..+.+.. ..+|.|++|++-.. .+--++...++.. ...+++|=....+...+.
T Consensus 19 ~~l~~~L~~~g~~v--~~~~~~~~a~~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~~~--~~~~ii~ls~~~~~~~~~ 94 (140)
T 3h5i_A 19 KTIANILNKYGYTV--EIALTGEAAVEKVSGGWYPDLILMDIELGEGMDGVQTALAIQQI--SELPVVFLTAHTEPAVVE 94 (140)
T ss_dssp HHHHHHHHHTTCEE--EEESSHHHHHHHHHTTCCCSEEEEESSCSSSCCHHHHHHHHHHH--CCCCEEEEESSSSCCCCG
T ss_pred HHHHHHHHHcCCEE--EEecChHHHHHHHhcCCCCCEEEEeccCCCCCCHHHHHHHHHhC--CCCCEEEEECCCCHHHHH
Confidence 45666776543322 222334445566655 67999999998642 4433444444432 345555544444444567
Q ss_pred HHHhcCCCeEeecCCCCHHHHHHHHHHc
Q 018508 152 KALDLGPQGVMFPMIDSPEAAKEAVSYC 179 (355)
Q Consensus 152 ~aLdaGa~GImvP~Vesaeea~~vv~a~ 179 (355)
++++.|+++++. |=-+.+++...++.+
T Consensus 95 ~~~~~g~~~~l~-KP~~~~~l~~~i~~~ 121 (140)
T 3h5i_A 95 KIRSVTAYGYVM-KSATEQVLITIVEMA 121 (140)
T ss_dssp GGGGSCEEEEEE-TTCCHHHHHHHHHHH
T ss_pred HHHhCCCcEEEe-CCCCHHHHHHHHHHH
Confidence 788999988654 445778887666554
No 243
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=78.86 E-value=9.1 Score=34.09 Aligned_cols=85 Identities=14% Similarity=-0.101 Sum_probs=60.0
Q ss_pred EecCCHHHHHHhhhcCCcEEEEeC-CCCC--CCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHHH-hcCCCeEeecCC
Q 018508 91 LLSFSPTLAEISGLAGYDFVVVDM-EHGP--GGISDALACLHALAATGTPAILRLPESCPTWAKKAL-DLGPQGVMFPMI 166 (355)
Q Consensus 91 v~~~sp~~~e~aa~~G~D~vilDl-Eh~~--~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~aL-daGa~GImvP~V 166 (355)
+.+.+++.++.+..+|+|++=|-. +.+| .+.++++.++..+...-..+-|=+|. +...+..++ ..+.+.|.+---
T Consensus 7 CGit~~eda~~a~~~GaD~iGfif~~~SpR~V~~~~a~~i~~~~~~~~~~VgVfvn~-~~~~i~~~~~~~~ld~vQLHG~ 85 (205)
T 1nsj_A 7 CGITNLEDALFSVESGADAVGFVFYPKSKRYISPEDARRISVELPPFVFRVGVFVNE-EPEKILDVASYVQLNAVQLHGE 85 (205)
T ss_dssp CCCCSHHHHHHHHHHTCSEEEEECCTTCTTBCCHHHHHHHHHHSCSSSEEEEEESSC-CHHHHHHHHHHHTCSEEEECSC
T ss_pred CCCCcHHHHHHHHHcCCCEEEEEecCCCCCcCCHHHHHHHHHhCCCCCCEEEEEeCC-CHHHHHHHHHhhCCCEEEECCC
Confidence 456799999999999999976664 6665 56788888876543222334443444 455555544 578999999888
Q ss_pred CCHHHHHHHH
Q 018508 167 DSPEAAKEAV 176 (355)
Q Consensus 167 esaeea~~vv 176 (355)
++++.++++.
T Consensus 86 e~~~~~~~l~ 95 (205)
T 1nsj_A 86 EPIELCRKIA 95 (205)
T ss_dssp CCHHHHHHHH
T ss_pred CCHHHHHHHh
Confidence 9998887653
No 244
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=78.73 E-value=33 Score=29.95 Aligned_cols=156 Identities=19% Similarity=0.138 Sum_probs=89.9
Q ss_pred HHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHH-HhCCCCeEEcCCCCCHHHHHHHHhcCCCeEeecCCCCHHHHHHH
Q 018508 97 TLAEISGLAGYDFVVVDMEHGPGGISDALACLHAL-AATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEA 175 (355)
Q Consensus 97 ~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~-~~~g~~~iVRV~~~~~~~i~~aLdaGa~GImvP~Vesaeea~~v 175 (355)
+.++.+...|+++|-+-..+ .+.+++.+.++.+ +..+...+| |+ .+..+++.|++||-++.-+-
T Consensus 17 ~~~~~a~~~Gv~~v~lr~k~--~~~~~~~~~i~~l~~~~~~~liv--nd----~~~~A~~~gadgvhl~~~~~------- 81 (210)
T 3ceu_A 17 KIITALFEEGLDILHLRKPE--TPAMYSERLLTLIPEKYHRRIVT--HE----HFYLKEEFNLMGIHLNARNP------- 81 (210)
T ss_dssp HHHHHHHHTTCCEEEECCSS--CCHHHHHHHHHHSCGGGGGGEEE--SS----CTTHHHHTTCSEEECCSSSC-------
T ss_pred HHHHHHHHCCCCEEEEccCC--CCHHHHHHHHHHHHHHhCCeEEE--eC----CHHHHHHcCCCEEEECcccc-------
Confidence 56778888999999888443 3556666666554 334555665 32 23567889999997765321
Q ss_pred HHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEEccHHHHHHHHHHhccCCccEEEEChhhHHhh-cCCC
Q 018508 176 VSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKRAEDIAAVDGVDCVQMGPLDLSAS-MGYL 254 (355)
Q Consensus 176 v~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mIET~~av~nieeIaavpgVD~l~iGp~DLs~s-lG~~ 254 (355)
..+ . .....+++-+-|++-+..++ .|+|.|.+||-==+.+ -|.
T Consensus 82 ----~~~-~-------------------------~~~~~ig~s~~t~~e~~~A~-----~GaDyv~~g~vf~t~sk~~~- 125 (210)
T 3ceu_A 82 ----SEP-H-------------------------DYAGHVSCSCHSVEEVKNRK-----HFYDYVFMSPIYDSISKVNY- 125 (210)
T ss_dssp ----SCC-T-------------------------TCCSEEEEEECSHHHHHTTG-----GGSSEEEECCCC---------
T ss_pred ----ccc-c-------------------------ccCCEEEEecCCHHHHHHHh-----hCCCEEEECCcCCCCCCCCC-
Confidence 000 0 01246777788876654442 3799999998411111 111
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCce--eecccCCchhHHHHHHCCCCEEEecchHH
Q 018508 255 WDPGHRKVREMMRVAEKGVLGGGKAY--LAGFAMPHDAPLEMKSRGYHMVSGAVDVG 309 (355)
Q Consensus 255 ~~~~~p~v~~ai~~iv~aa~a~g~~~--~g~~~~d~~~a~~~~~~G~~~vs~~~D~~ 309 (355)
+.+..++. +..+.... ...+++ +||+ +++.+..+++.|+.++.+++.+.
T Consensus 126 ~~~~g~~~---l~~~~~~~-~~~iPviaiGGI--~~~nv~~~~~~Ga~gVav~s~i~ 176 (210)
T 3ceu_A 126 YSTYTAEE---LREAQKAK-IIDSKVMALGGI--NEDNLLEIKDFGFGGAVVLGDLW 176 (210)
T ss_dssp -CCCCHHH---HHHHHHTT-CSSTTEEEESSC--CTTTHHHHHHTTCSEEEESHHHH
T ss_pred CCCCCHHH---HHHHHHhc-CCCCCEEEECCC--CHHHHHHHHHhCCCEEEEhHHhH
Confidence 11222332 22221110 024443 4554 47788889999999999998763
No 245
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=78.45 E-value=2.3 Score=38.21 Aligned_cols=59 Identities=17% Similarity=0.116 Sum_probs=41.4
Q ss_pred HHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHHHhcCCC
Q 018508 99 AEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQ 159 (355)
Q Consensus 99 ~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~aLdaGa~ 159 (355)
++.+..+|+|+|+|....-....++.++.+..+...|..++|=|.... ...++.+.|+.
T Consensus 75 ~~~~~~~Gad~Vll~~ser~l~~~e~~~~~~~a~~~Gl~~iv~v~~~~--e~~~~~~~~~~ 133 (219)
T 2h6r_A 75 AEAIKDCGCKGTLINHSEKRMLLADIEAVINKCKNLGLETIVCTNNIN--TSKAVAALSPD 133 (219)
T ss_dssp HHHHHHHTCCEEEESBTTBCCBHHHHHHHHHHHHHHTCEEEEEESSSH--HHHHHTTTCCS
T ss_pred HHHHHHcCCCEEEECCccccCCHHHHHHHHHHHHHCCCeEEEEeCCch--HHHHHHhCCCC
Confidence 688899999999994322123456678888877778998888886543 35566666664
No 246
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=78.28 E-value=6.7 Score=37.08 Aligned_cols=132 Identities=21% Similarity=0.186 Sum_probs=78.4
Q ss_pred HHHHHHHcCC-cEEEEEEecCCHHHHHHh-hhcC---------CcEEEEeCCCCC--CCHHHHHHHHHHHHhCCCCeEEc
Q 018508 75 SLKYRLQSNE-TLYGLFLLSFSPTLAEIS-GLAG---------YDFVVVDMEHGP--GGISDALACLHALAATGTPAILR 141 (355)
Q Consensus 75 ~lk~~L~~G~-~~~gl~v~~~sp~~~e~a-a~~G---------~D~vilDlEh~~--~~~~~a~~~i~a~~~~g~~~iVR 141 (355)
++.++++..+ .++++-=..|.-+.+++. ...| +|.|+|-=.|-. .+...+.+.++.. .......|=
T Consensus 126 ~~v~~~~g~~~~i~dTRKT~PglR~l~kyAV~~GGg~nHR~gL~d~vlikdNHi~~~G~i~~Av~~ar~~-~~~~~IeVE 204 (287)
T 3tqv_A 126 KLVKLISQYKTKLLDTRKTIPGFRLAQKYAVRCGGGFNHRIGLFDAYLIKENHIRSAGGIAKAVTKAKKL-DSNKVVEVE 204 (287)
T ss_dssp HHHHHHTTSSCEEECCSCCCTTCHHHHHHHHHHTTCBCCCSSSSSSEEECTTTC----CHHHHHHHHHHH-CTTSCEEEE
T ss_pred HHHHHhCCCCeEEEeecccCcchHHHHHHHHHhcCchheeccCccEEEEeHHHHHHhCCHHHHHHHHHhh-CCCCcEEEE
Confidence 4455554322 222322234555666553 3333 478888778863 2344444444432 223445554
Q ss_pred CCCCCHHHHHHHHhcCCCeEeecCCCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEEcc
Q 018508 142 LPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVES 221 (355)
Q Consensus 142 V~~~~~~~i~~aLdaGa~GImvP~Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mIET 221 (355)
|.. ..++..++++|++.||+=. -++++++++++.++- | +. ||-
T Consensus 205 v~t--l~ea~eAl~aGaD~I~LDn-~~~~~l~~av~~~~~-----~-------------------------v~----iea 247 (287)
T 3tqv_A 205 VTN--LDELNQAIAAKADIVMLDN-FSGEDIDIAVSIARG-----K-------------------------VA----LEV 247 (287)
T ss_dssp ESS--HHHHHHHHHTTCSEEEEES-CCHHHHHHHHHHHTT-----T-------------------------CE----EEE
T ss_pred eCC--HHHHHHHHHcCCCEEEEcC-CCHHHHHHHHHhhcC-----C-------------------------ce----EEE
Confidence 443 4678999999999999976 578999999998751 0 00 111
Q ss_pred HH--HHHHHHHHhccCCccEEEEChh
Q 018508 222 EE--GVKRAEDIAAVDGVDCVQMGPL 245 (355)
Q Consensus 222 ~~--av~nieeIaavpgVD~l~iGp~ 245 (355)
.. -++|+.++++. |||+|.+|.-
T Consensus 248 SGGIt~~~i~~~a~t-GVD~IsvGal 272 (287)
T 3tqv_A 248 SGNIDRNSIVAIAKT-GVDFISVGAI 272 (287)
T ss_dssp ESSCCTTTHHHHHTT-TCSEEECSHH
T ss_pred ECCCCHHHHHHHHHc-CCCEEEEChh
Confidence 11 24678888874 8999999874
No 247
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=77.75 E-value=7.4 Score=30.77 Aligned_cols=82 Identities=11% Similarity=0.015 Sum_probs=45.1
Q ss_pred HHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHHHhcCCCeEeecCCCCHHHHHHH
Q 018508 96 PTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEA 175 (355)
Q Consensus 96 p~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~aLdaGa~GImvP~Vesaeea~~v 175 (355)
.+..+.+....+|.|++|+.-...+--++...++.. ....++++=....+...+.+++..|+++++ +|=-+.+++...
T Consensus 39 ~~al~~~~~~~~dlvllD~~lp~~~g~~l~~~l~~~-~~~~~ii~ls~~~~~~~~~~~~~~ga~~~l-~KP~~~~~L~~~ 116 (141)
T 3cu5_A 39 INAIQIALKHPPNVLLTDVRMPRMDGIELVDNILKL-YPDCSVIFMSGYSDKEYLKAAIKFRAIRYV-EKPIDPSEIMDA 116 (141)
T ss_dssp HHHHHHHTTSCCSEEEEESCCSSSCHHHHHHHHHHH-CTTCEEEEECCSTTTCCC------CCCEEE-CSSCCHHHHHHH
T ss_pred HHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhh-CCCCcEEEEeCCCcHHHHHHHHhCCccEEE-eCCCCHHHHHHH
Confidence 445566666779999999987544433433344331 233444444444444456788899998865 455577887766
Q ss_pred HHHc
Q 018508 176 VSYC 179 (355)
Q Consensus 176 v~a~ 179 (355)
++.+
T Consensus 117 i~~~ 120 (141)
T 3cu5_A 117 LKQS 120 (141)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6543
No 248
>3kyj_B CHEY6 protein, putative histidine protein kinase; protein-protein interaction, histidine kinase, response regulator, phosphorylation; 1.40A {Rhodobacter sphaeroides} PDB: 3kyi_B*
Probab=77.25 E-value=12 Score=29.49 Aligned_cols=86 Identities=16% Similarity=0.115 Sum_probs=45.6
Q ss_pred hHHHHHHHcCCcEEEEEEecCCH-HHHHHhhhc-CCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCC---CCCHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSP-TLAEISGLA-GYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLP---ESCPT 148 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp-~~~e~aa~~-G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~---~~~~~ 148 (355)
..+++.|..- +-+.......+. +..+.+... .+|.|++|+.-...+--++...++.. .. .+++=+. ..+..
T Consensus 27 ~~l~~~L~~~-~~~~~v~~~~~~~~al~~l~~~~~~dlvilD~~l~~~~g~~~~~~lr~~--~~-~~iiil~~~~~~~~~ 102 (145)
T 3kyj_B 27 LYIASFIKTL-PDFKVVAQAANGQEALDKLAAQPNVDLILLDIEMPVMDGMEFLRHAKLK--TR-AKICMLSSVAVSGSP 102 (145)
T ss_dssp HHHHHHHTTC-TTEEEEEEESSHHHHHHHHHHCTTCCEEEECTTSCCCTTCHHHHHHHHH--CC-CEEC-CBSSCSTTSS
T ss_pred HHHHHHHHhC-CCceEEEEECCHHHHHHHHhcCCCCCEEEEeCCCCCCCHHHHHHHHHhc--CC-CCeEEEEEeccCChH
Confidence 3456666542 112222133444 455666666 79999999986543322233333322 23 3333232 23345
Q ss_pred HHHHHHhcCCCeEee
Q 018508 149 WAKKALDLGPQGVMF 163 (355)
Q Consensus 149 ~i~~aLdaGa~GImv 163 (355)
.+.++++.|+++.+.
T Consensus 103 ~~~~~~~~ga~~~l~ 117 (145)
T 3kyj_B 103 HAARARELGADGVVA 117 (145)
T ss_dssp HHHHHHHTTCSCCCB
T ss_pred HHHHHHhCCCCEEEe
Confidence 678899999987553
No 249
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=77.20 E-value=9.8 Score=33.40 Aligned_cols=86 Identities=13% Similarity=0.184 Sum_probs=51.8
Q ss_pred chHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHH----HHHHHHHHHH-hCCCCeEEcCCCCCH
Q 018508 73 PESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGIS----DALACLHALA-ATGTPAILRLPESCP 147 (355)
Q Consensus 73 ~n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~----~a~~~i~a~~-~~g~~~iVRV~~~~~ 147 (355)
...+++.. . ...+|+ ...++..++.+...|+|+|+++--.....+. .-...++.+. ... .+++=..+.++
T Consensus 101 ~~~~~~~~-~-~~~ig~--sv~t~~~~~~a~~~gaD~i~~~~~f~~~~~~g~~~~~~~~l~~~~~~~~-~pvia~GGI~~ 175 (221)
T 1yad_A 101 PKQIRARF-P-HLHIGR--SVHSLEEAVQAEKEDADYVLFGHVFETDCKKGLEGRGVSLLSDIKQRIS-IPVIAIGGMTP 175 (221)
T ss_dssp HHHHHHHC-T-TCEEEE--EECSHHHHHHHHHTTCSEEEEECCC----------CHHHHHHHHHHHCC-SCEEEESSCCG
T ss_pred HHHHHHHC-C-CCEEEE--EcCCHHHHHHHHhCCCCEEEECCccccCCCCCCCCCCHHHHHHHHHhCC-CCEEEECCCCH
Confidence 34455443 3 445565 4468888888889999999997532111111 0122333332 223 34555667778
Q ss_pred HHHHHHHhcCCCeEee
Q 018508 148 TWAKKALDLGPQGVMF 163 (355)
Q Consensus 148 ~~i~~aLdaGa~GImv 163 (355)
..+..++++|++||.+
T Consensus 176 ~nv~~~~~~Ga~gv~v 191 (221)
T 1yad_A 176 DRLRDVKQAGADGIAV 191 (221)
T ss_dssp GGHHHHHHTTCSEEEE
T ss_pred HHHHHHHHcCCCEEEE
Confidence 8899999999999876
No 250
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=77.05 E-value=6.9 Score=40.27 Aligned_cols=79 Identities=14% Similarity=0.155 Sum_probs=53.1
Q ss_pred CCcEEEEEEecC--CHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHH-hCCCCeEEcCCCCCHHHHHHHHhcCCC
Q 018508 83 NETLYGLFLLSF--SPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALA-ATGTPAILRLPESCPTWAKKALDLGPQ 159 (355)
Q Consensus 83 G~~~~gl~v~~~--sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~-~~g~~~iVRV~~~~~~~i~~aLdaGa~ 159 (355)
|+-.+|.-+... .-+.++.+..+|+|+|+||.-|+-. +...++++.++ ..+..+++==|-..++..+.++++||+
T Consensus 268 grL~VgAAVgv~~d~~eR~~aLv~AGvD~iviD~ahGhs--~~v~~~i~~ik~~~p~~~viaGNVaT~e~a~~Li~aGAD 345 (556)
T 4af0_A 268 KQLYCGAAIGTRPGDKDRLKLLAEAGLDVVVLDSSQGNS--VYQIEFIKWIKQTYPKIDVIAGNVVTREQAAQLIAAGAD 345 (556)
T ss_dssp CCBCCEEEECSSHHHHHHHHHHHHTTCCEEEECCSCCCS--HHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHTCS
T ss_pred hceeeEEEeccCccHHHHHHHHHhcCCcEEEEecccccc--HHHHHHHHHHHhhCCcceEEeccccCHHHHHHHHHcCCC
Confidence 344566666543 3457788889999999999999843 33345555543 233334444455567888889999999
Q ss_pred eEee
Q 018508 160 GVMF 163 (355)
Q Consensus 160 GImv 163 (355)
+|.|
T Consensus 346 ~vkV 349 (556)
T 4af0_A 346 GLRI 349 (556)
T ss_dssp EEEE
T ss_pred EEee
Confidence 8865
No 251
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=76.84 E-value=39 Score=32.20 Aligned_cols=78 Identities=17% Similarity=0.176 Sum_probs=48.6
Q ss_pred EEEEEEecCCHHHH----HHhhhcCCcEEEEeCCCC-------------CCCHHHHHHHHHHHHh-CCCCeEE--cCCCC
Q 018508 86 LYGLFLLSFSPTLA----EISGLAGYDFVVVDMEHG-------------PGGISDALACLHALAA-TGTPAIL--RLPES 145 (355)
Q Consensus 86 ~~gl~v~~~sp~~~----e~aa~~G~D~vilDlEh~-------------~~~~~~a~~~i~a~~~-~g~~~iV--RV~~~ 145 (355)
.+++-+.+.+|+.+ +.+...|||.|-|.+-.- ..+.+.+.+++.++.. .+.++.| |+...
T Consensus 59 p~~vQL~g~~p~~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~~PV~vKiR~g~~ 138 (350)
T 3b0p_A 59 PIALQLAGSDPKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRLGLE 138 (350)
T ss_dssp SEEEEEECSCHHHHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHCSSCEEEEEESCBT
T ss_pred eEEEEeCCCCHHHHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHhCCceEEEEecCcC
Confidence 34455556677533 444567999998887411 0134455667776643 5788888 65433
Q ss_pred C-------HHHHHHHHhcCCCeEee
Q 018508 146 C-------PTWAKKALDLGPQGVMF 163 (355)
Q Consensus 146 ~-------~~~i~~aLdaGa~GImv 163 (355)
+ ...++.+.++|+++|.+
T Consensus 139 ~~~~~~~~~~~a~~l~~aG~d~I~V 163 (350)
T 3b0p_A 139 GKETYRGLAQSVEAMAEAGVKVFVV 163 (350)
T ss_dssp TCCCHHHHHHHHHHHHHTTCCEEEE
T ss_pred ccccHHHHHHHHHHHHHcCCCEEEE
Confidence 2 12356778899999987
No 252
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=76.79 E-value=10 Score=28.91 Aligned_cols=103 Identities=12% Similarity=-0.076 Sum_probs=59.9
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHH-hCCCCeEEcCCCCCHHHHHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALA-ATGTPAILRLPESCPTWAKK 152 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~-~~g~~~iVRV~~~~~~~i~~ 152 (355)
..+++.|..-...+ ..-.+..+..+.+....+|.|++|+.-...+--++...++... ....++++=....+... ..
T Consensus 17 ~~l~~~L~~~g~~v--~~~~~~~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~-~~ 93 (127)
T 3i42_A 17 ETFKELLEMLGFQA--DYVMSGTDALHAMSTRGYDAVFIDLNLPDTSGLALVKQLRALPMEKTSKFVAVSGFAKNDL-GK 93 (127)
T ss_dssp HHHHHHHHHTTEEE--EEESSHHHHHHHHHHSCCSEEEEESBCSSSBHHHHHHHHHHSCCSSCCEEEEEECC-CTTC-CH
T ss_pred HHHHHHHHHcCCCE--EEECCHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhhccCCCCEEEEECCcchhH-HH
Confidence 35666676543322 2223344566777778899999999876544334333343321 12334444444444444 67
Q ss_pred HHhcCCCeEeecCCCCHHHHHHHHHHcC
Q 018508 153 ALDLGPQGVMFPMIDSPEAAKEAVSYCR 180 (355)
Q Consensus 153 aLdaGa~GImvP~Vesaeea~~vv~a~~ 180 (355)
++..|++++ +++=-+.+++.+.++...
T Consensus 94 ~~~~g~~~~-l~KP~~~~~L~~~i~~~~ 120 (127)
T 3i42_A 94 EACELFDFY-LEKPIDIASLEPILQSIE 120 (127)
T ss_dssp HHHHHCSEE-EESSCCHHHHHHHHHHHC
T ss_pred HHHHhhHHh-eeCCCCHHHHHHHHHHhh
Confidence 788898884 445557888888777654
No 253
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=76.78 E-value=12 Score=36.39 Aligned_cols=78 Identities=21% Similarity=0.037 Sum_probs=46.6
Q ss_pred CCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCC------------CCCCCHHHHHHHHHHHHhCCCCeEEcCCCC-CHHH
Q 018508 83 NETLYGLFLLSFSPTLAEISGLAGYDFVVVDME------------HGPGGISDALACLHALAATGTPAILRLPES-CPTW 149 (355)
Q Consensus 83 G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlE------------h~~~~~~~a~~~i~a~~~~g~~~iVRV~~~-~~~~ 149 (355)
+.|++. -...+++.++.+...|+|+|++-.+ |+....+.+..+...+...+.+++. ..+. ++..
T Consensus 194 ~~pviv--~~v~~~~~a~~a~~~Gad~I~vg~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~~~ipVia-~GGI~~~~d 270 (404)
T 1eep_A 194 NLDLIA--GNIVTKEAALDLISVGADCLKVGIGPGSICTTRIVAGVGVPQITAICDVYEACNNTNICIIA-DGGIRFSGD 270 (404)
T ss_dssp TCEEEE--EEECSHHHHHHHHTTTCSEEEECSSCSTTSHHHHHHCCCCCHHHHHHHHHHHHTTSSCEEEE-ESCCCSHHH
T ss_pred CCeEEE--cCCCcHHHHHHHHhcCCCEEEECCCCCcCcCccccCCCCcchHHHHHHHHHHHhhcCceEEE-ECCCCCHHH
Confidence 445542 2456789999999999999999432 2211222222222222223444433 2333 3678
Q ss_pred HHHHHhcCCCeEee
Q 018508 150 AKKALDLGPQGVMF 163 (355)
Q Consensus 150 i~~aLdaGa~GImv 163 (355)
+.+++.+||++|++
T Consensus 271 ~~~ala~GAd~V~i 284 (404)
T 1eep_A 271 VVKAIAAGADSVMI 284 (404)
T ss_dssp HHHHHHHTCSEEEE
T ss_pred HHHHHHcCCCHHhh
Confidence 89999999999988
No 254
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=76.63 E-value=13 Score=33.42 Aligned_cols=79 Identities=20% Similarity=0.262 Sum_probs=51.0
Q ss_pred HHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeE--EcCCCCCH-----H----HHHHHHhcCCCeEeecCC
Q 018508 98 LAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAI--LRLPESCP-----T----WAKKALDLGPQGVMFPMI 166 (355)
Q Consensus 98 ~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~i--VRV~~~~~-----~----~i~~aLdaGa~GImvP~V 166 (355)
.++.+...|+|++.+=.+ ...+.++..+..++..+..++ ......+. . ..+.+.+.|.+|++++.
T Consensus 83 ~~~~~~~~gad~vtvh~~---~G~~~l~~~~~~~~~~g~~v~vLt~~s~~~~~~~~~~~~~~~a~~a~~~G~~GvV~~a- 158 (228)
T 3m47_A 83 ICRATFKAGADAIIVHGF---PGADSVRACLNVAEEMGREVFLLTEMSHPGAEMFIQGAADEIARMGVDLGVKNYVGPS- 158 (228)
T ss_dssp HHHHHHHTTCSEEEEEST---TCHHHHHHHHHHHHHHTCEEEEECCCCSGGGGTTHHHHHHHHHHHHHHTTCCEEECCS-
T ss_pred HHHHHHhCCCCEEEEecc---CCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHHHHHHHHHHHHHHHhCCcEEEECC-
Confidence 556678899999999554 345556666665544343343 34443321 1 13446678999999887
Q ss_pred CCHHHHHHHHHHcC
Q 018508 167 DSPEAAKEAVSYCR 180 (355)
Q Consensus 167 esaeea~~vv~a~~ 180 (355)
..+++++.+.+.+.
T Consensus 159 t~~~e~~~ir~~~~ 172 (228)
T 3m47_A 159 TRPERLSRLREIIG 172 (228)
T ss_dssp SCHHHHHHHHHHHC
T ss_pred CChHHHHHHHHhcC
Confidence 56888988888764
No 255
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=76.61 E-value=6 Score=30.81 Aligned_cols=103 Identities=14% Similarity=0.071 Sum_probs=59.9
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKA 153 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~a 153 (355)
..+++.|..-.. +-+..-.+..+..+.+....+|.|++|+.-...+--++...++.. ....++++=....+.....++
T Consensus 28 ~~l~~~L~~~g~-~~v~~~~~~~~a~~~l~~~~~dlvi~D~~l~~~~g~~~~~~l~~~-~~~~~ii~~s~~~~~~~~~~~ 105 (135)
T 3snk_A 28 RDVATRLDALAI-YDVRVSETDDFLKGPPADTRPGIVILDLGGGDLLGKPGIVEARAL-WATVPLIAVSDELTSEQTRVL 105 (135)
T ss_dssp HHHHHHHHHTSS-EEEEEECGGGGGGCCCTTCCCSEEEEEEETTGGGGSTTHHHHHGG-GTTCCEEEEESCCCHHHHHHH
T ss_pred HHHHHHHhhcCC-eEEEEeccHHHHHHHHhccCCCEEEEeCCCCCchHHHHHHHHHhh-CCCCcEEEEeCCCCHHHHHHH
Confidence 456667764331 222222233345566667789999999875432211122222221 124455554455567788899
Q ss_pred HhcCCCeEeecCCCCHHHHHHHHHHc
Q 018508 154 LDLGPQGVMFPMIDSPEAAKEAVSYC 179 (355)
Q Consensus 154 LdaGa~GImvP~Vesaeea~~vv~a~ 179 (355)
++.|+++++. |=-+.+++...++.+
T Consensus 106 ~~~g~~~~l~-KP~~~~~L~~~i~~~ 130 (135)
T 3snk_A 106 VRMNASDWLH-KPLDGKELLNAVTFH 130 (135)
T ss_dssp HHTTCSEEEE-SSCCHHHHHHHHHHT
T ss_pred HHcCcHhhcc-CCCCHHHHHHHHHHH
Confidence 9999998654 445788888777665
No 256
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=76.13 E-value=2 Score=40.99 Aligned_cols=114 Identities=18% Similarity=0.182 Sum_probs=71.1
Q ss_pred ecCCHHHHHHh-hhcC---------CcEEEEeCCCCC--CCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHHHhcCCC
Q 018508 92 LSFSPTLAEIS-GLAG---------YDFVVVDMEHGP--GGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQ 159 (355)
Q Consensus 92 ~~~sp~~~e~a-a~~G---------~D~vilDlEh~~--~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~aLdaGa~ 159 (355)
..|.-+.+++- ...| +|.|+|-=+|-. -+...+...++.. .......|=|.. ..++..++++|++
T Consensus 153 T~PGlR~lekyAV~~GGg~nHR~gL~D~vLIKdNHi~~~G~i~~Av~~ar~~-~p~~kIeVEv~t--l~e~~eAl~aGaD 229 (300)
T 3l0g_A 153 TTPGLRMLDKYSVCIGGGESYRDNLCDGVLIKDNHIASCGSITLAIQRLRKN-LKNEYIAIECDN--ISQVEESLSNNVD 229 (300)
T ss_dssp CCTTCHHHHHHHHHHTTCBCSCSSTTSCEEECHHHHHHHSCHHHHHHHHHHH-SSSCCEEEEESS--HHHHHHHHHTTCS
T ss_pred cChhhhHHHHHHHHhcCCcccccCCcceEEEcHhHHHHhCCHHHHHHHHHHh-CCCCCEEEEECC--HHHHHHHHHcCCC
Confidence 45555666653 3333 477777666741 2344444333332 123444444433 5788999999999
Q ss_pred eEeecCCCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEEccHH--HHHHHHHHhccCCc
Q 018508 160 GVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEE--GVKRAEDIAAVDGV 237 (355)
Q Consensus 160 GImvP~Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mIET~~--av~nieeIaavpgV 237 (355)
.||+=.. ++++++++++.++- | + .||-.. -++|+.++++. ||
T Consensus 230 iImLDn~-s~~~l~~av~~~~~-----~-------------------------v----~leaSGGIt~~~i~~~A~t-GV 273 (300)
T 3l0g_A 230 MILLDNM-SISEIKKAVDIVNG-----K-------------------------S----VLEVSGCVNIRNVRNIALT-GV 273 (300)
T ss_dssp EEEEESC-CHHHHHHHHHHHTT-----S-------------------------S----EEEEESSCCTTTHHHHHTT-TC
T ss_pred EEEECCC-CHHHHHHHHHhhcC-----c-------------------------e----EEEEECCCCHHHHHHHHHc-CC
Confidence 9999774 78999999998751 0 0 122111 24678888874 89
Q ss_pred cEEEECh
Q 018508 238 DCVQMGP 244 (355)
Q Consensus 238 D~l~iGp 244 (355)
|+|.+|.
T Consensus 274 D~IsvGa 280 (300)
T 3l0g_A 274 DYISIGC 280 (300)
T ss_dssp SEEECGG
T ss_pred CEEEeCc
Confidence 9999997
No 257
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=76.07 E-value=8 Score=35.72 Aligned_cols=67 Identities=9% Similarity=0.096 Sum_probs=53.4
Q ss_pred cCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHHHhc-CCCeEee
Q 018508 93 SFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDL-GPQGVMF 163 (355)
Q Consensus 93 ~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~aLda-Ga~GImv 163 (355)
+-++..+..+...|+|.|+|+.- ..+.+++..++..++..|..++|=|.. ...+.+++++ |++-|-+
T Consensus 110 i~~~~qi~ea~~~GAD~ilLi~a--~l~~~~l~~l~~~a~~lGl~~lvEv~~--~eE~~~A~~l~g~~iIGi 177 (251)
T 1i4n_A 110 YIDTVQVKLASSVGADAILIIAR--ILTAEQIKEIYEAAEELGMDSLVEVHS--REDLEKVFSVIRPKIIGI 177 (251)
T ss_dssp CCSTHHHHHHHHTTCSEEEEEGG--GSCHHHHHHHHHHHHTTTCEEEEEECS--HHHHHHHHTTCCCSEEEE
T ss_pred CCCHHHHHHHHHcCCCEEEEecc--cCCHHHHHHHHHHHHHcCCeEEEEeCC--HHHHHHHHhcCCCCEEEE
Confidence 34565666688999999999987 456688888888888889999998874 6678999999 9985544
No 258
>1ys7_A Transcriptional regulatory protein PRRA; response regulator, DNA binding domain, phosphorylation; 1.58A {Mycobacterium tuberculosis} SCOP: a.4.6.1 c.23.1.1 PDB: 1ys6_A
Probab=76.07 E-value=9.8 Score=32.63 Aligned_cols=102 Identities=13% Similarity=-0.014 Sum_probs=60.0
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKA 153 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~a 153 (355)
..+++.|......+ ..-.+..+..+.+....+|.|++|+.-...+--++...++.. ....++++=....+......+
T Consensus 21 ~~l~~~L~~~g~~v--~~~~~~~~a~~~~~~~~~dlvllD~~l~~~~g~~~~~~l~~~-~~~~~ii~lt~~~~~~~~~~~ 97 (233)
T 1ys7_A 21 ASLERGLRLSGFEV--ATAVDGAEALRSATENRPDAIVLDINMPVLDGVSVVTALRAM-DNDVPVCVLSARSSVDDRVAG 97 (233)
T ss_dssp HHHHHHHHHTTCEE--EEESSHHHHHHHHHHSCCSEEEEESSCSSSCHHHHHHHHHHT-TCCCCEEEEECCCTTTCCCTT
T ss_pred HHHHHHHHhCCCEE--EEECCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhc-CCCCCEEEEEcCCCHHHHHHH
Confidence 45667776533332 222333445666777789999999986544433333333321 134444444444445556778
Q ss_pred HhcCCCeEeecCCCCHHHHHHHHHHc
Q 018508 154 LDLGPQGVMFPMIDSPEAAKEAVSYC 179 (355)
Q Consensus 154 LdaGa~GImvP~Vesaeea~~vv~a~ 179 (355)
++.|+++++ ++--+.+++...++.+
T Consensus 98 ~~~ga~~~l-~Kp~~~~~L~~~i~~~ 122 (233)
T 1ys7_A 98 LEAGADDYL-VKPFVLAELVARVKAL 122 (233)
T ss_dssp TTTTCSEEE-ESSCCHHHHHHHHHHH
T ss_pred HHcCCCEEE-eCCCCHHHHHHHHHHH
Confidence 899999865 4455778877666654
No 259
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=76.03 E-value=19 Score=34.71 Aligned_cols=69 Identities=19% Similarity=0.124 Sum_probs=44.0
Q ss_pred CCHHHHHHhhhcCCcEEEEeC------CCCCCCHHHHHHHHHHHHhCCCCeEEcCCCC-CHHHHHHHHhcCCCeEeec
Q 018508 94 FSPTLAEISGLAGYDFVVVDM------EHGPGGISDALACLHALAATGTPAILRLPES-CPTWAKKALDLGPQGVMFP 164 (355)
Q Consensus 94 ~sp~~~e~aa~~G~D~vilDl------Eh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~-~~~~i~~aLdaGa~GImvP 164 (355)
.+++.++.+..+|+|+|++.. ..++...+.+.++..++. ...++ +=-.+. +...+.++|..||++|++=
T Consensus 238 ~~~e~a~~a~~~Gad~I~vs~~ggr~~~~g~~~~~~l~~v~~~v~-~~ipV-ia~GGI~~g~D~~kalalGAd~V~iG 313 (368)
T 2nli_A 238 QHPEDADMAIKRGASGIWVSNHGARQLYEAPGSFDTLPAIAERVN-KRVPI-VFDSGVRRGEHVAKALASGADVVALG 313 (368)
T ss_dssp CSHHHHHHHHHTTCSEEEECCGGGTSCSSCCCHHHHHHHHHHHHT-TSSCE-EECSSCCSHHHHHHHHHTTCSEEEEC
T ss_pred CCHHHHHHHHHcCCCEEEEcCCCcCCCCCCCChHHHHHHHHHHhC-CCCeE-EEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 689999999999999999953 112333333333333321 12333 323333 4668899999999999974
No 260
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=75.42 E-value=5.9 Score=38.57 Aligned_cols=70 Identities=19% Similarity=0.175 Sum_probs=44.8
Q ss_pred ecCCHHHHHHhhhcCCcEEEEeCCCCCC---------CHHHHHHHHHHHHhCCCCeEEcCCCC-CHHHHHHHHhcCCCeE
Q 018508 92 LSFSPTLAEISGLAGYDFVVVDMEHGPG---------GISDALACLHALAATGTPAILRLPES-CPTWAKKALDLGPQGV 161 (355)
Q Consensus 92 ~~~sp~~~e~aa~~G~D~vilDlEh~~~---------~~~~a~~~i~a~~~~g~~~iVRV~~~-~~~~i~~aLdaGa~GI 161 (355)
+..+++.++.+..+|+|+|.+-..-+.. ...++. .+..+..... +++=..+. ++..+.++|.+||++|
T Consensus 148 ~V~T~e~A~~a~~aGaD~I~Vg~g~G~~~~tr~~~g~g~p~l~-aI~~~~~~~~-PVIAdGGI~~~~di~kALa~GAd~V 225 (361)
T 3r2g_A 148 NVATYAGADYLASCGADIIKAGIGGGSVCSTRIKTGFGVPMLT-CIQDCSRADR-SIVADGGIKTSGDIVKALAFGADFV 225 (361)
T ss_dssp EECSHHHHHHHHHTTCSEEEECCSSSSCHHHHHHHCCCCCHHH-HHHHHTTSSS-EEEEESCCCSHHHHHHHHHTTCSEE
T ss_pred CcCCHHHHHHHHHcCCCEEEEcCCCCcCccccccCCccHHHHH-HHHHHHHhCC-CEEEECCCCCHHHHHHHHHcCCCEE
Confidence 5689999999999999999995442211 011121 2222211111 55544454 4778999999999999
Q ss_pred ee
Q 018508 162 MF 163 (355)
Q Consensus 162 mv 163 (355)
|+
T Consensus 226 ~i 227 (361)
T 3r2g_A 226 MI 227 (361)
T ss_dssp EE
T ss_pred EE
Confidence 97
No 261
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=75.40 E-value=15 Score=32.65 Aligned_cols=74 Identities=9% Similarity=-0.149 Sum_probs=43.7
Q ss_pred ecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHh-C--CCCe---EEcCCCC-----CH-HHHHHHHhcCCC
Q 018508 92 LSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAA-T--GTPA---ILRLPES-----CP-TWAKKALDLGPQ 159 (355)
Q Consensus 92 ~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~-~--g~~~---iVRV~~~-----~~-~~i~~aLdaGa~ 159 (355)
.+.+|+.++.+..+|+|.|.+..|.-. +.+...+.++.... . +..+ .|.+.+. ++ +.++.+.+.|++
T Consensus 83 gI~~~~~~~~~l~~Gad~V~lg~~~l~-~p~~~~~~~~~~g~~~~~~l~~~~g~v~~~g~~~~~~~~~e~~~~~~~~G~~ 161 (244)
T 1vzw_A 83 GIRDDDTLAAALATGCTRVNLGTAALE-TPEWVAKVIAEHGDKIAVGLDVRGTTLRGRGWTRDGGDLYETLDRLNKEGCA 161 (244)
T ss_dssp SCCSHHHHHHHHHTTCSEEEECHHHHH-CHHHHHHHHHHHGGGEEEEEEEETTEECCSSSCCCCCBHHHHHHHHHHTTCC
T ss_pred CcCCHHHHHHHHHcCCCEEEECchHhh-CHHHHHHHHHHcCCcEEEEEEccCCEEEEcCcccCCCCHHHHHHHHHhCCCC
Confidence 357899999999999999998776432 23334444443310 0 1111 1222221 33 346888899999
Q ss_pred eEeecCC
Q 018508 160 GVMFPMI 166 (355)
Q Consensus 160 GImvP~V 166 (355)
.|++--+
T Consensus 162 ~i~~~~~ 168 (244)
T 1vzw_A 162 RYVVTDI 168 (244)
T ss_dssp CEEEEEC
T ss_pred EEEEecc
Confidence 8877443
No 262
>3eol_A Isocitrate lyase; seattle structural center for infectious disease, ssgcid; 2.00A {Brucella melitensis} PDB: 3oq8_A 3e5b_A 3p0x_A*
Probab=75.28 E-value=69 Score=31.89 Aligned_cols=38 Identities=16% Similarity=0.052 Sum_probs=29.8
Q ss_pred chHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEE
Q 018508 73 PESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVV 112 (355)
Q Consensus 73 ~n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vil 112 (355)
..+||+.|..+++++ ..+.-++..+.++..+||+.|++
T Consensus 50 a~~lr~Ll~~~~~l~--~~ga~D~~sA~~~~~aGf~Aiy~ 87 (433)
T 3eol_A 50 ANRLWKLIHEEDFVN--ALGALSGNQAMQMVRAGLKAIYL 87 (433)
T ss_dssp HHHHHHHHHHSSCEE--EEBCSSHHHHHHHHHTTCCCEEE
T ss_pred HHHHHHHhccCCCEE--eCCCCcHHHHHHHHHhCCCEEEe
Confidence 478999999887743 33566888888888899998886
No 263
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=75.21 E-value=55 Score=30.72 Aligned_cols=212 Identities=17% Similarity=0.189 Sum_probs=115.6
Q ss_pred CchHHHHHHHcCCcEEEEEEecCCHHH----HHHhhhcCCcEEEEeCCCCC----CCHHHHHHHHHH-HH--hCCCCeEE
Q 018508 72 SPESLKYRLQSNETLYGLFLLSFSPTL----AEISGLAGYDFVVVDMEHGP----GGISDALACLHA-LA--ATGTPAIL 140 (355)
Q Consensus 72 ~~n~lk~~L~~G~~~~gl~v~~~sp~~----~e~aa~~G~D~vilDlEh~~----~~~~~a~~~i~a-~~--~~g~~~iV 140 (355)
....+-+.-++++..++.| |..+-+. ++.+...+...| |..--+. ...+.+..++++ ++ ..+.|+.+
T Consensus 8 ~~~~ll~~A~~~~yAV~Af-Nv~n~e~~~avi~AAee~~sPvI-lq~s~~~~~~~~g~~~~~~~v~~~A~~~~~~VPVal 85 (288)
T 3q94_A 8 SMKEMLNKALEGKYAVGQF-NMNNLEWTQAILAAAEEEKSPVI-LGVSEGAARHMTGFKTVVAMVKALIEEMNITVPVAI 85 (288)
T ss_dssp CSHHHHHHHHHHTCCEEEE-ECCSHHHHHHHHHHHHHTTCCEE-EEEEHHHHHHTSCHHHHHHHHHHHHHHTTCCSCEEE
T ss_pred CHHHHHHHHHHCCcEEEEE-eeCCHHHHHHHHHHHHHhCCCEE-EECChhhhhhcCCHHHHHHHHHHHHHhcCCCCcEEE
Confidence 4455666666778888888 4555543 455566777754 4432221 245556666654 34 56778777
Q ss_pred cCCCC-CHHHHHHHHhcCCCeEee-----cCCCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceE
Q 018508 141 RLPES-CPTWAKKALDLGPQGVMF-----PMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELL 214 (355)
Q Consensus 141 RV~~~-~~~~i~~aLdaGa~GImv-----P~Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~ 214 (355)
=.... +...+.+++++|...||+ |.=++.+..+++++.++.. |..-- .--...|...+.... ++.
T Consensus 86 HlDHg~~~e~i~~ai~~GFtSVMiDgS~~p~eeNi~~Tk~vv~~ah~~-----gvsVE-aElG~vgG~Ed~~~~-~~~-- 156 (288)
T 3q94_A 86 HLDHGSSFEKCKEAIDAGFTSVMIDASHHPFEENVETTKKVVEYAHAR-----NVSVE-AELGTVGGQEDDVIA-EGV-- 156 (288)
T ss_dssp EEEEECSHHHHHHHHHHTCSEEEECCTTSCHHHHHHHHHHHHHHHHTT-----TCEEE-EEESBCBCSCSSCGG-GGC--
T ss_pred ECCCCCCHHHHHHHHHcCCCeEEEeCCCCCHHHHHHHHHHHHHHHHHc-----CCeEE-EEeeeeccccCCcCC-ccc--
Confidence 66554 567899999999999996 7777888889999988632 21100 000000100000000 000
Q ss_pred EEEEEccHHHHHHHHHHhccCCccEEEEChhhHHhhcCC-CCCC-CCHHHHHHHHHHHHHHHhCCCce-e-ecccCCchh
Q 018508 215 IMCQVESEEGVKRAEDIAAVDGVDCVQMGPLDLSASMGY-LWDP-GHRKVREMMRVAEKGVLGGGKAY-L-AGFAMPHDA 290 (355)
Q Consensus 215 vi~mIET~~av~nieeIaavpgVD~l~iGp~DLs~slG~-~~~~-~~p~v~~ai~~iv~aa~a~g~~~-~-g~~~~d~~~ 290 (355)
+.=+| +.+.++++--|||.|-+.-+-- =|. ++.+ -.++.+..+++ +. +.+. + |+-..+.++
T Consensus 157 ---~yT~P---eea~~Fv~~TgvD~LAvaiGt~---HG~Y~~~p~Ld~~~L~~I~~---~v---~vpLVlHGgSG~~~e~ 221 (288)
T 3q94_A 157 ---IYADP---AECKHLVEATGIDCLAPALGSV---HGPYKGEPNLGFAEMEQVRD---FT---GVPLVLHGGTGIPTAD 221 (288)
T ss_dssp ---BCCCH---HHHHHHHHHHCCSEEEECSSCB---SSCCSSSCCCCHHHHHHHHH---HH---CSCEEECCCTTCCHHH
T ss_pred ---cCCCH---HHHHHHHHHHCCCEEEEEcCcc---cCCcCCCCccCHHHHHHHHH---hc---CCCEEEeCCCCCCHHH
Confidence 01122 4445555434788776633210 121 2222 13344433333 22 3331 1 222233577
Q ss_pred HHHHHHCCCCEEEecchHH
Q 018508 291 PLEMKSRGYHMVSGAVDVG 309 (355)
Q Consensus 291 a~~~~~~G~~~vs~~~D~~ 309 (355)
.++.++.|+.-+.+.+|..
T Consensus 222 i~~ai~~Gv~KiNi~Tdl~ 240 (288)
T 3q94_A 222 IEKAISLGTSKINVNTENQ 240 (288)
T ss_dssp HHHHHHTTEEEEEECHHHH
T ss_pred HHHHHHcCCeEEEEChHHH
Confidence 8999999999999999974
No 264
>4a3q_A Alanine racemase 1; isomerase, PLP-dependent enzymes; HET: PLP; 2.15A {Staphylococcus aureus} PDB: 3oo2_A
Probab=75.07 E-value=62 Score=31.27 Aligned_cols=90 Identities=18% Similarity=0.060 Sum_probs=56.1
Q ss_pred HHHHHHcCCcEEEEEEec-----CCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCC-CeEEcCCCCCHHH
Q 018508 76 LKYRLQSNETLYGLFLLS-----FSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGT-PAILRLPESCPTW 149 (355)
Q Consensus 76 lk~~L~~G~~~~gl~v~~-----~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~-~~iVRV~~~~~~~ 149 (355)
+|+++. .+..+..-+.. +.+..++.+...|++.+. ....+++..+. ..|. .+++-+....+..
T Consensus 24 l~~~~~-~~~~l~aVvKAnaYGhg~~~va~~l~~~G~~~f~------Va~~~Ea~~lr----~aGi~~~ilvlg~~~~~~ 92 (382)
T 4a3q_A 24 VFSTLH-PNKTVMAVVKANAYGLGSVKVARHLMENGATFFA------VATLDEAIELR----MHGITAKILVLGVLPAKD 92 (382)
T ss_dssp HHHHHC-TTSEEEEECHHHHHTTCHHHHHHHHHHTTCCEEE------ESSHHHHHHHH----TTTCCSEEEECSCCCGGG
T ss_pred HHhhcC-CCCEEEEEEeeccccCCHHHHHHHHHHCCCCEEE------EeEHHHHHHHH----hCCCCCCEEEEeCCCHHH
Confidence 555553 33444444444 236667778889998765 24556665543 2343 3444455556667
Q ss_pred HHHHHhcCCCeEeecCCCCHHHHHHHHHHcC
Q 018508 150 AKKALDLGPQGVMFPMIDSPEAAKEAVSYCR 180 (355)
Q Consensus 150 i~~aLdaGa~GImvP~Vesaeea~~vv~a~~ 180 (355)
+..+++.+ +.|.|+|.++++.+.+.++
T Consensus 93 ~~~~~~~~----i~~~V~s~~~l~~l~~~a~ 119 (382)
T 4a3q_A 93 IDKAIQHR----VALTVPSKQWLKEAIKNIS 119 (382)
T ss_dssp HHHHHHTT----CBEEECCHHHHHHHHHTCC
T ss_pred HHHHHHcC----CEEEECCHHHHHHHHHHHH
Confidence 88888754 3578999999999988765
No 265
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=74.87 E-value=12 Score=31.10 Aligned_cols=99 Identities=15% Similarity=0.137 Sum_probs=58.8
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCC-CHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPG-GISDALACLHALAATGTPAILRLPESCPTWAKK 152 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~-~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~ 152 (355)
..+++.|..-...+ ..-.+..+..+.+....+|.|++|+.-... ..+-++ .++.. ....++++=....+...+.+
T Consensus 21 ~~l~~~L~~~g~~v--~~~~~~~~al~~~~~~~~dlvl~D~~lp~~~g~~~~~-~l~~~-~~~~~ii~lt~~~~~~~~~~ 96 (184)
T 3rqi_A 21 GTLARGLERRGYAV--RQAHNKDEALKLAGAEKFEFITVXLHLGNDSGLSLIA-PLCDL-QPDARILVLTGYASIATAVQ 96 (184)
T ss_dssp HHHHHHHHHTTCEE--EEECSHHHHHHHHTTSCCSEEEECSEETTEESHHHHH-HHHHH-CTTCEEEEEESSCCHHHHHH
T ss_pred HHHHHHHHHCCCEE--EEeCCHHHHHHHHhhCCCCEEEEeccCCCccHHHHHH-HHHhc-CCCCCEEEEeCCCCHHHHHH
Confidence 34666676533333 222344456677777889999999875432 233322 23321 23344444445556777889
Q ss_pred HHhcCCCeEeecCCCCHHHHHHHHH
Q 018508 153 ALDLGPQGVMFPMIDSPEAAKEAVS 177 (355)
Q Consensus 153 aLdaGa~GImvP~Vesaeea~~vv~ 177 (355)
+++.|+++++. |=-+.+++...++
T Consensus 97 a~~~Ga~~~l~-KP~~~~~L~~~i~ 120 (184)
T 3rqi_A 97 AVKDGADNYLA-KPANVESILAALQ 120 (184)
T ss_dssp HHHHTCSEEEE-SSCCHHHHHHHTS
T ss_pred HHHhCHHHhee-CCCCHHHHHHHHH
Confidence 99999998654 4456777665554
No 266
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=74.85 E-value=24 Score=35.03 Aligned_cols=70 Identities=24% Similarity=0.244 Sum_probs=44.5
Q ss_pred ecCCHHHHHHhhhcCCcEEEEeCCCCC------------CCHHHHHHHHHHHHhCCCCeEE--cCCCCCHHHHHHHHhcC
Q 018508 92 LSFSPTLAEISGLAGYDFVVVDMEHGP------------GGISDALACLHALAATGTPAIL--RLPESCPTWAKKALDLG 157 (355)
Q Consensus 92 ~~~sp~~~e~aa~~G~D~vilDlEh~~------------~~~~~a~~~i~a~~~~g~~~iV--RV~~~~~~~i~~aLdaG 157 (355)
+..+++.++.+...|+|+|.+-.+-+. ........+..++...+.+++. .|. ++..+.++|.+|
T Consensus 285 ~~~t~e~a~~l~~~G~d~I~v~~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~~~ipvia~GGI~--~~~di~kala~G 362 (494)
T 1vrd_A 285 NVATPEGTEALIKAGADAVKVGVGPGSICTTRVVAGVGVPQLTAVMECSEVARKYDVPIIADGGIR--YSGDIVKALAAG 362 (494)
T ss_dssp EECSHHHHHHHHHTTCSEEEECSSCSTTCHHHHHHCCCCCHHHHHHHHHHHHHTTTCCEEEESCCC--SHHHHHHHHHTT
T ss_pred CcCCHHHHHHHHHcCCCEEEEcCCCCccccccccCCCCccHHHHHHHHHHHHhhcCCCEEEECCcC--CHHHHHHHHHcC
Confidence 356788888899999999999665431 1111222222233334556555 333 467889999999
Q ss_pred CCeEee
Q 018508 158 PQGVMF 163 (355)
Q Consensus 158 a~GImv 163 (355)
|++|++
T Consensus 363 Ad~V~i 368 (494)
T 1vrd_A 363 AESVMV 368 (494)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 999987
No 267
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=74.81 E-value=19 Score=34.78 Aligned_cols=76 Identities=20% Similarity=0.151 Sum_probs=47.8
Q ss_pred CCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCC-------CCCHHHHHHHHHHHHhCCCCeEEcCCCC-CHHHHHHHH
Q 018508 83 NETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHG-------PGGISDALACLHALAATGTPAILRLPES-CPTWAKKAL 154 (355)
Q Consensus 83 G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~-------~~~~~~a~~~i~a~~~~g~~~iVRV~~~-~~~~i~~aL 154 (355)
+.|++-=.+ .+++.++.+...|+|+|++.. |+ +...+.+.++.+++ .+..+++=-.+. +...+.++|
T Consensus 217 ~~PvivK~v--~~~e~A~~a~~~GaD~I~vsn-~GG~~~d~~~~~~~~L~~i~~av--~~~ipVia~GGI~~g~Dv~kaL 291 (352)
T 3sgz_A 217 RLPIILKGI--LTKEDAELAMKHNVQGIVVSN-HGGRQLDEVSASIDALREVVAAV--KGKIEVYMDGGVRTGTDVLKAL 291 (352)
T ss_dssp CSCEEEEEE--CSHHHHHHHHHTTCSEEEECC-GGGTSSCSSCCHHHHHHHHHHHH--TTSSEEEEESSCCSHHHHHHHH
T ss_pred CCCEEEEec--CcHHHHHHHHHcCCCEEEEeC-CCCCccCCCccHHHHHHHHHHHh--CCCCeEEEECCCCCHHHHHHHH
Confidence 556543322 678999999999999999965 33 22233333333332 222333333333 466789999
Q ss_pred hcCCCeEee
Q 018508 155 DLGPQGVMF 163 (355)
Q Consensus 155 daGa~GImv 163 (355)
.+||++|++
T Consensus 292 alGA~aV~i 300 (352)
T 3sgz_A 292 ALGARCIFL 300 (352)
T ss_dssp HTTCSEEEE
T ss_pred HcCCCEEEE
Confidence 999999987
No 268
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=74.74 E-value=33 Score=31.53 Aligned_cols=189 Identities=13% Similarity=0.027 Sum_probs=100.8
Q ss_pred chHHHHHHHc-CCcEEEEEEecC-----------CHH-HHHHhhhcCCcEEEE--eCCCCCCCHHHHHHHHHHHHhCCCC
Q 018508 73 PESLKYRLQS-NETLYGLFLLSF-----------SPT-LAEISGLAGYDFVVV--DMEHGPGGISDALACLHALAATGTP 137 (355)
Q Consensus 73 ~n~lk~~L~~-G~~~~gl~v~~~-----------sp~-~~e~aa~~G~D~vil--DlEh~~~~~~~a~~~i~a~~~~g~~ 137 (355)
+..|+++|++ |++.+=.=+.-. +|. ++..+... +..|=+ |-.+...+.+.++..-. ....|
T Consensus 28 ~~~f~~al~~~~~~~vIaE~K~aSPSkG~i~~~~~~~~iA~~y~~~-A~~IsVlTd~~~F~gs~~dL~~ir~---~v~lP 103 (251)
T 1i4n_A 28 NHRFLEVLSGKERVKIIAEFKKASPSAGDINADASLEDFIRMYDEL-ADAISILTEKHYFKGDPAFVRAARN---LTCRP 103 (251)
T ss_dssp CCHHHHHHCCSSSCEEEEEECSBCSSSCBSCTTCCHHHHHHHHHHH-CSEEEEECCCSSSCCCTHHHHHHHT---TCCSC
T ss_pred CcCHHHHHhhCCCceEEEeecCCCCCCCccCCCCCHHHHHHHHHHh-CCceEEEecccccCCCHHHHHHHHH---hCCCC
Confidence 4578888874 333222222212 233 33334344 766554 44444344444333222 23556
Q ss_pred eEEcCCCCCHHHHHHHHhcCCCeEeecCCC-CHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEE
Q 018508 138 AILRLPESCPTWAKKALDLGPQGVMFPMID-SPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIM 216 (355)
Q Consensus 138 ~iVRV~~~~~~~i~~aLdaGa~GImvP~Ve-saeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi 216 (355)
++-+=.-.++.++..+..+||++|++=..- +.++++.+++.++.. | ..++
T Consensus 104 vLrKDfi~~~~qi~ea~~~GAD~ilLi~a~l~~~~l~~l~~~a~~l--G---------------------------l~~l 154 (251)
T 1i4n_A 104 ILAKDFYIDTVQVKLASSVGADAILIIARILTAEQIKEIYEAAEEL--G---------------------------MDSL 154 (251)
T ss_dssp EEEECCCCSTHHHHHHHHTTCSEEEEEGGGSCHHHHHHHHHHHHTT--T---------------------------CEEE
T ss_pred EEEeeCCCCHHHHHHHHHcCCCEEEEecccCCHHHHHHHHHHHHHc--C---------------------------CeEE
Confidence 655544456778888999999998765553 668999999888642 1 2233
Q ss_pred EEEccHHHHHHHHHHhccCCccEEEEChhhHHhhcCCCCCCCCHHHHHHHHHHHHHHHhCCCce-eecccCCchhHHHHH
Q 018508 217 CQVESEEGVKRAEDIAAVDGVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVAEKGVLGGGKAY-LAGFAMPHDAPLEMK 295 (355)
Q Consensus 217 ~mIET~~av~nieeIaavpgVD~l~iGp~DLs~slG~~~~~~~p~v~~ai~~iv~aa~a~g~~~-~g~~~~d~~~a~~~~ 295 (355)
+-+-|.+= ++..++.+|.|.|-+=.-||.. ...+-....+ ++.... .++.. +.+=-.++++++.+.
T Consensus 155 vEv~~~eE---~~~A~~l~g~~iIGinnr~l~t-----~~~d~~~~~~----l~~~ip-~~~~vIaEsGI~t~edv~~~~ 221 (251)
T 1i4n_A 155 VEVHSRED---LEKVFSVIRPKIIGINTRDLDT-----FEIKKNVLWE----LLPLVP-DDTVVVAESGIKDPRELKDLR 221 (251)
T ss_dssp EEECSHHH---HHHHHTTCCCSEEEEECBCTTT-----CCBCTTHHHH----HGGGSC-TTSEEEEESCCCCGGGHHHHT
T ss_pred EEeCCHHH---HHHHHhcCCCCEEEEeCccccc-----CCCCHHHHHH----HHHhCC-CCCEEEEeCCCCCHHHHHHHH
Confidence 33334333 3333444467876666666522 1222112222 222211 22222 222224689999999
Q ss_pred HCCCCEEEecchH
Q 018508 296 SRGYHMVSGAVDV 308 (355)
Q Consensus 296 ~~G~~~vs~~~D~ 308 (355)
+. ++.|.+|.-.
T Consensus 222 ~~-a~avLVG~ai 233 (251)
T 1i4n_A 222 GK-VNAVLVGTSI 233 (251)
T ss_dssp TT-CSEEEECHHH
T ss_pred Hh-CCEEEEcHHH
Confidence 99 9999998654
No 269
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=74.48 E-value=26 Score=33.14 Aligned_cols=66 Identities=20% Similarity=0.210 Sum_probs=42.2
Q ss_pred HHHHhhhcCCcEEEEeCCCC--------CC----------CH----HHHHHHHHHHH-hCCCCeEEcCCCC-------CH
Q 018508 98 LAEISGLAGYDFVVVDMEHG--------PG----------GI----SDALACLHALA-ATGTPAILRLPES-------CP 147 (355)
Q Consensus 98 ~~e~aa~~G~D~vilDlEh~--------~~----------~~----~~a~~~i~a~~-~~g~~~iVRV~~~-------~~ 147 (355)
.++.+..+|||.|=|.+-|+ |. +. .-+.+++++++ ....++.||+... +.
T Consensus 149 aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v~~pv~vris~~~~~~~g~~~ 228 (338)
T 1z41_A 149 AAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVWDGPLFVRVSASDYTDKGLDI 228 (338)
T ss_dssp HHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEECCCCSTTSCCH
T ss_pred HHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHcCCcEEEEecCcccCCCCCCH
Confidence 45566789999999999874 31 11 12344555554 2378899998663 22
Q ss_pred H----HHHHHHhcCCCeEee
Q 018508 148 T----WAKKALDLGPQGVMF 163 (355)
Q Consensus 148 ~----~i~~aLdaGa~GImv 163 (355)
. .++.+.+.|++.|-+
T Consensus 229 ~~~~~~a~~l~~~Gvd~i~v 248 (338)
T 1z41_A 229 ADHIGFAKWMKEQGVDLIDC 248 (338)
T ss_dssp HHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEE
Confidence 2 245566789998776
No 270
>3e5p_A Alanine racemase; ALR, PLP, SCP, isomerase, pyridoxal phosph; HET: PLP EPE 2PE; 2.50A {Enterococcus faecalis} PDB: 3e6e_A*
Probab=74.25 E-value=17 Score=35.16 Aligned_cols=83 Identities=12% Similarity=0.017 Sum_probs=50.7
Q ss_pred CcEEEEEEec-----CCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCC-eEEcCCCCCHHHHHHHHhcC
Q 018508 84 ETLYGLFLLS-----FSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTP-AILRLPESCPTWAKKALDLG 157 (355)
Q Consensus 84 ~~~~gl~v~~-----~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~-~iVRV~~~~~~~i~~aLdaG 157 (355)
...+..-+.. +.+..++.+...|++.+. ....+++..+.. .|.. +++-.....+..+..+++.+
T Consensus 32 ~~~l~avvKanaYGhg~~~va~~l~~~G~~~f~------va~~~Ea~~lr~----~G~~~~Ilvlg~~~~~~~~~~~~~~ 101 (371)
T 3e5p_A 32 GTALFAVVKANGYGHGAVESAKAAKKGGATGFC------VALLDEAIELRE----AGVQDPILILSVVDLAYVPLLIQYD 101 (371)
T ss_dssp SSEEEEECHHHHHTTCHHHHHHHHHHTTCCCEE------ESSHHHHHHHHT----TTCCSCEEEEEECCGGGHHHHHHHT
T ss_pred CCEEEEEECcccccCCHHHHHHHHHHcCCCEEE------EEeHHHHHHHHh----cCCCCCEEEEcCCCHHHHHHHHHCC
Confidence 3444444444 456677778888987654 245566554432 3332 33323444566677777764
Q ss_pred CCeEeecCCCCHHHHHHH-HHHcC
Q 018508 158 PQGVMFPMIDSPEAAKEA-VSYCR 180 (355)
Q Consensus 158 a~GImvP~Vesaeea~~v-v~a~~ 180 (355)
+ .+.|+|.++++.+ .+.++
T Consensus 102 ---i-~~~V~s~~~l~~l~~~~a~ 121 (371)
T 3e5p_A 102 ---L-SVTVATQEWLEAALQQLTP 121 (371)
T ss_dssp ---C-EEEECCHHHHHHHHHHHCS
T ss_pred ---C-EEEECCHHHHHHHHHHHHH
Confidence 3 5789999999999 87764
No 271
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=74.10 E-value=49 Score=29.60 Aligned_cols=172 Identities=12% Similarity=0.084 Sum_probs=92.2
Q ss_pred hHHHHHHHcCCcEEEEEEecCC---HHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHH-hCCCCeEEcCCC-CCHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFS---PTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALA-ATGTPAILRLPE-SCPT 148 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~s---p~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~-~~g~~~iVRV~~-~~~~ 148 (355)
..+.++|.. .+++-+.-..+. ...++.+...|.++|=+.+-. +. +.+.++.+. ..+ ..+|.... ....
T Consensus 8 ~~~~~~l~~-~~ii~vir~~~~~~~~~~~~al~~gGv~~iel~~k~-~~----~~~~i~~l~~~~~-~l~vgaGtvl~~d 80 (224)
T 1vhc_A 8 QQIIEKLRE-LKIVPVIALDNADDILPLADTLAKNGLSVAEITFRS-EA----AADAIRLLRANRP-DFLIAAGTVLTAE 80 (224)
T ss_dssp HHHHHHHHH-HCEEEEECCSSGGGHHHHHHHHHHTTCCEEEEETTS-TT----HHHHHHHHHHHCT-TCEEEEESCCSHH
T ss_pred HHHHHHHHH-CCeEEEEeCCCHHHHHHHHHHHHHcCCCEEEEeccC-ch----HHHHHHHHHHhCc-CcEEeeCcEeeHH
Confidence 445566654 445554433222 246788888999999998543 22 233343221 222 22222211 2457
Q ss_pred HHHHHHhcCCCeEeecCCCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEEccHHHHHHH
Q 018508 149 WAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKRA 228 (355)
Q Consensus 149 ~i~~aLdaGa~GImvP~Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mIET~~av~ni 228 (355)
.+..++++||++|+.|.. +.+-++.+.+ + | +.+++-+.|++-+..+
T Consensus 81 ~~~~A~~aGAd~v~~p~~-d~~v~~~ar~---~---g---------------------------~~~i~Gv~t~~e~~~A 126 (224)
T 1vhc_A 81 QVVLAKSSGADFVVTPGL-NPKIVKLCQD---L---N---------------------------FPITPGVNNPMAIEIA 126 (224)
T ss_dssp HHHHHHHHTCSEEECSSC-CHHHHHHHHH---T---T---------------------------CCEECEECSHHHHHHH
T ss_pred HHHHHHHCCCCEEEECCC-CHHHHHHHHH---h---C---------------------------CCEEeccCCHHHHHHH
Confidence 899999999999999964 3332332222 1 1 1122236777665554
Q ss_pred HHHhccCCccEEEEChhhHHhhcCCCCCCC-CHHHHHHHHHHHHHHHhCCCce--eecccCCchhHHHHHHC-CCCEEEe
Q 018508 229 EDIAAVDGVDCVQMGPLDLSASMGYLWDPG-HRKVREMMRVAEKGVLGGGKAY--LAGFAMPHDAPLEMKSR-GYHMVSG 304 (355)
Q Consensus 229 eeIaavpgVD~l~iGp~DLs~slG~~~~~~-~p~v~~ai~~iv~aa~a~g~~~--~g~~~~d~~~a~~~~~~-G~~~vs~ 304 (355)
.+ .|.|.|-+ + +.... .++.+..+. ... .++++ .||+ +++.+..+++. |...+.
T Consensus 127 ~~----~Gad~vk~----F------pa~~~gG~~~lk~l~---~~~--~~ipvvaiGGI--~~~N~~~~l~agga~~v~- 184 (224)
T 1vhc_A 127 LE----MGISAVKF----F------PAEASGGVKMIKALL---GPY--AQLQIMPTGGI--GLHNIRDYLAIPNIVACG- 184 (224)
T ss_dssp HH----TTCCEEEE----T------TTTTTTHHHHHHHHH---TTT--TTCEEEEBSSC--CTTTHHHHHTSTTBCCEE-
T ss_pred HH----CCCCEEEE----e------eCccccCHHHHHHHH---hhC--CCCeEEEECCc--CHHHHHHHHhcCCCEEEE-
Confidence 43 37888877 1 11111 233332222 111 13443 4444 56788999998 988887
Q ss_pred cchH
Q 018508 305 AVDV 308 (355)
Q Consensus 305 ~~D~ 308 (355)
++.+
T Consensus 185 gS~i 188 (224)
T 1vhc_A 185 GSWF 188 (224)
T ss_dssp ECGG
T ss_pred Echh
Confidence 5543
No 272
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=73.91 E-value=17 Score=34.48 Aligned_cols=32 Identities=16% Similarity=-0.083 Sum_probs=23.7
Q ss_pred CCcEEEEEE-ecCCHHHHHHhhhcCCcEEEEeC
Q 018508 83 NETLYGLFL-LSFSPTLAEISGLAGYDFVVVDM 114 (355)
Q Consensus 83 G~~~~gl~v-~~~sp~~~e~aa~~G~D~vilDl 114 (355)
+.|++--.+ +..+++.++.+..+|+|+|++..
T Consensus 178 ~~Pv~vK~~~~~~~~~~a~~a~~~Gad~I~v~~ 210 (349)
T 1p0k_A 178 SVPVIVKEVGFGMSKASAGKLYEAGAAAVDIGG 210 (349)
T ss_dssp SSCEEEEEESSCCCHHHHHHHHHHTCSEEEEEC
T ss_pred CCCEEEEecCCCCCHHHHHHHHHcCCCEEEEcC
Confidence 556554332 33578999999999999999975
No 273
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=73.87 E-value=13 Score=34.49 Aligned_cols=75 Identities=9% Similarity=0.014 Sum_probs=50.6
Q ss_pred EecCCHH----HHHHhhhcCCc-EEEEeCCCC--------CCCHHHHHHHHHHHHh-CCCCeEEcCCCC-CHHH----HH
Q 018508 91 LLSFSPT----LAEISGLAGYD-FVVVDMEHG--------PGGISDALACLHALAA-TGTPAILRLPES-CPTW----AK 151 (355)
Q Consensus 91 v~~~sp~----~~e~aa~~G~D-~vilDlEh~--------~~~~~~a~~~i~a~~~-~g~~~iVRV~~~-~~~~----i~ 151 (355)
+...+++ .++.+...|+| +|-|.+-.- ..+.+.+.+++++++. .+.+++|++... +... ++
T Consensus 100 i~g~~~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~~~~Pv~vKi~~~~~~~~~~~~a~ 179 (311)
T 1jub_A 100 IAGMSAAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFFTKPLGVKLPPYFDLVHFDIMAE 179 (311)
T ss_dssp ECCSSHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTCCSCEEEEECCCCSHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHH
Confidence 3345554 44556678999 999987411 1256677788888764 367899998754 3332 46
Q ss_pred HHHhcCCCeEeecC
Q 018508 152 KALDLGPQGVMFPM 165 (355)
Q Consensus 152 ~aLdaGa~GImvP~ 165 (355)
.+.++|+++|.++-
T Consensus 180 ~~~~~G~d~i~v~~ 193 (311)
T 1jub_A 180 ILNQFPLTYVNSVN 193 (311)
T ss_dssp HHTTSCCCEEEECC
T ss_pred HHHHcCCcEEEecC
Confidence 67789999998864
No 274
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=73.71 E-value=38 Score=32.17 Aligned_cols=67 Identities=22% Similarity=0.262 Sum_probs=43.5
Q ss_pred HHHHhhhcCCcEEEEeCCCC--------CC----------CHH-H---HHHHHHHHH-hCCCCeEEcCCCCC--------
Q 018508 98 LAEISGLAGYDFVVVDMEHG--------PG----------GIS-D---ALACLHALA-ATGTPAILRLPESC-------- 146 (355)
Q Consensus 98 ~~e~aa~~G~D~vilDlEh~--------~~----------~~~-~---a~~~i~a~~-~~g~~~iVRV~~~~-------- 146 (355)
.++.+..+|||.|=|..-|+ |. +.+ . +.+++++++ ....++.||++..+
T Consensus 149 aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v~~pv~vRls~~~~~~~g~~~ 228 (340)
T 3gr7_A 149 GARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVWDGPLFVRISASDYHPDGLTA 228 (340)
T ss_dssp HHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEESCCCSTTSCCG
T ss_pred HHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhcCCceEEEeccccccCCCCCH
Confidence 45666778999999999983 31 112 1 234555554 34778999998642
Q ss_pred --H-HHHHHHHhcCCCeEeec
Q 018508 147 --P-TWAKKALDLGPQGVMFP 164 (355)
Q Consensus 147 --~-~~i~~aLdaGa~GImvP 164 (355)
. ..++.+.++|++.|-+-
T Consensus 229 ~~~~~la~~L~~~Gvd~i~vs 249 (340)
T 3gr7_A 229 KDYVPYAKRMKEQGVDLVDVS 249 (340)
T ss_dssp GGHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEe
Confidence 1 23456667899987764
No 275
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=73.68 E-value=7.5 Score=34.22 Aligned_cols=72 Identities=13% Similarity=0.003 Sum_probs=43.8
Q ss_pred EecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHH-----HHHHHHHHhC--CCCeEEcCCCCCHHHHHHHHhcCCCeEee
Q 018508 91 LLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDA-----LACLHALAAT--GTPAILRLPESCPTWAKKALDLGPQGVMF 163 (355)
Q Consensus 91 v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a-----~~~i~a~~~~--g~~~iVRV~~~~~~~i~~aLdaGa~GImv 163 (355)
+...+++.+..+. .|+|+|.++-=....++... ...++.+... ...|+|=+.+.++..+..++++|++||-+
T Consensus 93 ~s~~t~~e~~~A~-~GaDyv~~g~vf~t~sk~~~~~~~g~~~l~~~~~~~~~~iPviaiGGI~~~nv~~~~~~Ga~gVav 171 (210)
T 3ceu_A 93 CSCHSVEEVKNRK-HFYDYVFMSPIYDSISKVNYYSTYTAEELREAQKAKIIDSKVMALGGINEDNLLEIKDFGFGGAVV 171 (210)
T ss_dssp EEECSHHHHHTTG-GGSSEEEECCCC---------CCCCHHHHHHHHHTTCSSTTEEEESSCCTTTHHHHHHTTCSEEEE
T ss_pred EecCCHHHHHHHh-hCCCEEEECCcCCCCCCCCCCCCCCHHHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHhCCCEEEE
Confidence 4456888888887 89999987643211111111 1223333222 22345557888888899999999999865
No 276
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=73.47 E-value=25 Score=32.23 Aligned_cols=66 Identities=21% Similarity=0.281 Sum_probs=46.6
Q ss_pred HHHHhcCCCeEeecCCCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEE--Ec-cHHHHHH
Q 018508 151 KKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQ--VE-SEEGVKR 227 (355)
Q Consensus 151 ~~aLdaGa~GImvP~Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~m--IE-T~~av~n 227 (355)
+.+.+.|++.|-++...+.+.++.+++.+.--| +...-- .+ ...++++
T Consensus 166 ~~a~~~GAD~vkt~~~~~~e~~~~~~~~~~~~p-----------------------------V~asGGi~~~~~~~~l~~ 216 (263)
T 1w8s_A 166 RIALELGADAMKIKYTGDPKTFSWAVKVAGKVP-----------------------------VLMSGGPKTKTEEDFLKQ 216 (263)
T ss_dssp HHHHHHTCSEEEEECCSSHHHHHHHHHHTTTSC-----------------------------EEEECCSCCSSHHHHHHH
T ss_pred HHHHHcCCCEEEEcCCCCHHHHHHHHHhCCCCe-----------------------------EEEEeCCCCCCHHHHHHH
Confidence 446788999999997668899999998873212 111111 22 3567788
Q ss_pred HHHHhccCCccEEEEChhh
Q 018508 228 AEDIAAVDGVDCVQMGPLD 246 (355)
Q Consensus 228 ieeIaavpgVD~l~iGp~D 246 (355)
+.+..+ .|.+|+.+|.+=
T Consensus 217 i~~~~~-aGA~GvsvgraI 234 (263)
T 1w8s_A 217 VEGVLE-AGALGIAVGRNV 234 (263)
T ss_dssp HHHHHH-TTCCEEEESHHH
T ss_pred HHHHHH-cCCeEEEEehhh
Confidence 888776 489999999983
No 277
>2qv0_A Protein MRKE; structural genomics, transcription, PSI-2, protein structure initiative; 2.40A {Klebsiella pneumoniae}
Probab=73.33 E-value=25 Score=27.27 Aligned_cols=98 Identities=7% Similarity=-0.019 Sum_probs=55.1
Q ss_pred hHHHHHHHc-CCcEEEEEEecCCH-HHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHh-CCCCe-EEcCCCCCHHH
Q 018508 74 ESLKYRLQS-NETLYGLFLLSFSP-TLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAA-TGTPA-ILRLPESCPTW 149 (355)
Q Consensus 74 n~lk~~L~~-G~~~~gl~v~~~sp-~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~-~g~~~-iVRV~~~~~~~ 149 (355)
..+++.|.. +... ......+. +..+.+....+|.|++|+.-...+--++ ++.++. ....+ ++=... ...
T Consensus 23 ~~l~~~L~~~~~~~--~v~~~~~~~~al~~l~~~~~dlvi~d~~l~~~~g~~~---~~~l~~~~~~~~ii~~s~~--~~~ 95 (143)
T 2qv0_A 23 QELSWLINTHSQME--IVGSFDDGLDVLKFLQHNKVDAIFLDINIPSLDGVLL---AQNISQFAHKPFIVFITAW--KEH 95 (143)
T ss_dssp HHHHHHHHHHSCCE--EEEEESCHHHHHHHHHHCCCSEEEECSSCSSSCHHHH---HHHHTTSTTCCEEEEEESC--CTT
T ss_pred HHHHHHHHhCCCce--EEEEeCCHHHHHHHHHhCCCCEEEEecCCCCCCHHHH---HHHHHccCCCceEEEEeCC--HHH
Confidence 456666654 2222 11123444 4556666778999999998765443333 333332 23332 322222 235
Q ss_pred HHHHHhcCCCeEeecCCCCHHHHHHHHHHc
Q 018508 150 AKKALDLGPQGVMFPMIDSPEAAKEAVSYC 179 (355)
Q Consensus 150 i~~aLdaGa~GImvP~Vesaeea~~vv~a~ 179 (355)
+.+++..|+++++ ++--+.+++...++.+
T Consensus 96 ~~~~~~~g~~~~l-~KP~~~~~l~~~i~~~ 124 (143)
T 2qv0_A 96 AVEAFELEAFDYI-LKPYQESRIINMLQKL 124 (143)
T ss_dssp HHHHHHTTCSEEE-ESSCCHHHHHHHHHHH
T ss_pred HHHHHhCCcceEE-eCCCCHHHHHHHHHHH
Confidence 6778899999875 3445678877666554
No 278
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=73.17 E-value=18 Score=33.06 Aligned_cols=64 Identities=19% Similarity=0.224 Sum_probs=33.2
Q ss_pred HHHHhhhc-CCcEEEEeCC-CCCCCHHHHHHHHHHHHhC---CCCeEEcCCCCCHHHHHHHHhcCCCeEe
Q 018508 98 LAEISGLA-GYDFVVVDME-HGPGGISDALACLHALAAT---GTPAILRLPESCPTWAKKALDLGPQGVM 162 (355)
Q Consensus 98 ~~e~aa~~-G~D~vilDlE-h~~~~~~~a~~~i~a~~~~---g~~~iVRV~~~~~~~i~~aLdaGa~GIm 162 (355)
+++.+..+ |.++|-+|+= +.+...++....+..++.. |..+++-+. .++..++++.+.|++.|+
T Consensus 84 f~~~a~~agg~~~i~l~i~~d~~~~~~e~~~~~~~a~~~~~~g~~vi~~~~-~~~~~a~~~~~~gad~v~ 152 (264)
T 1xm3_A 84 IARLAKASGLCDMIKVEVIGCSRSLLPDPVETLKASEQLLEEGFIVLPYTS-DDVVLARKLEELGVHAIM 152 (264)
T ss_dssp HHHHHHHTTCCSSEEECCBCCTTTCCBCHHHHHHHHHHHHHTTCCEEEEEC-SCHHHHHHHHHHTCSCBE
T ss_pred HHHHHHHcCCCCeEEEeecCCCcccccchHHHHHHHHHHHCCCeEEEEEcC-CCHHHHHHHHHhCCCEEE
Confidence 34445444 5677666541 2221123333444444333 666653222 245678888888988773
No 279
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=73.13 E-value=23 Score=26.25 Aligned_cols=100 Identities=16% Similarity=-0.008 Sum_probs=55.3
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKA 153 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~a 153 (355)
..+++.|......+ ..-.+..+..+.+....+|.+++|+.-...+--+....++.. ....++++=....+.. ..+
T Consensus 15 ~~l~~~l~~~~~~v--~~~~~~~~a~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~-~~~~~ii~~s~~~~~~--~~~ 89 (116)
T 3a10_A 15 ELLKEELQEEGYEI--DTAENGEEALKKFFSGNYDLVILDIEMPGISGLEVAGEIRKK-KKDAKIILLTAYSHYR--SDM 89 (116)
T ss_dssp HHHHHHHHHTTCEE--EEESSHHHHHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHHH-CTTCCEEEEESCGGGG--GCG
T ss_pred HHHHHHHHHCCCEE--EEeCCHHHHHHHHhcCCCCEEEEECCCCCCCHHHHHHHHHcc-CCCCeEEEEECCcchH--HHH
Confidence 34566666433322 222333455666677789999999986544433444444432 1233433333322222 567
Q ss_pred HhcCCCeEeecCCCCHHHHHHHHHHc
Q 018508 154 LDLGPQGVMFPMIDSPEAAKEAVSYC 179 (355)
Q Consensus 154 LdaGa~GImvP~Vesaeea~~vv~a~ 179 (355)
+..|+++++ +|--+.+++...++.+
T Consensus 90 ~~~g~~~~l-~Kp~~~~~l~~~i~~~ 114 (116)
T 3a10_A 90 SSWAADEYV-VKSFNFDELKEKVKKL 114 (116)
T ss_dssp GGGGSSEEE-ECCSSTHHHHHHHHHH
T ss_pred HhccccceE-ECCCCHHHHHHHHHHH
Confidence 788998865 4555677777666543
No 280
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=73.12 E-value=29 Score=31.69 Aligned_cols=92 Identities=21% Similarity=0.198 Sum_probs=52.9
Q ss_pred CCcEEEEEEecCCHHHHHHhhhcCCcEEEEeC-----CCCCCCHHHHHHHHHHHHhCCCCeEEcCCCC-CHHHHHHHHhc
Q 018508 83 NETLYGLFLLSFSPTLAEISGLAGYDFVVVDM-----EHGPGGISDALACLHALAATGTPAILRLPES-CPTWAKKALDL 156 (355)
Q Consensus 83 G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDl-----Eh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~-~~~~i~~aLda 156 (355)
|-.+ +++..++++.++.+...|+|||+.=. ..+..+.+ ....++. ....+++|= -+. ++.++.+++.+
T Consensus 126 g~~v--i~~~~~~~~~a~~~~~~gad~v~~~~~~~Gt~~~~~~~~-~l~~i~~--~~~iPviv~-gGI~t~eda~~~~~~ 199 (264)
T 1xm3_A 126 GFIV--LPYTSDDVVLARKLEELGVHAIMPGASPIGSGQGILNPL-NLSFIIE--QAKVPVIVD-AGIGSPKDAAYAMEL 199 (264)
T ss_dssp TCCE--EEEECSCHHHHHHHHHHTCSCBEECSSSTTCCCCCSCHH-HHHHHHH--HCSSCBEEE-SCCCSHHHHHHHHHT
T ss_pred CeEE--EEEcCCCHHHHHHHHHhCCCEEEECCcccCCCCCCCCHH-HHHHHHh--cCCCCEEEE-eCCCCHHHHHHHHHc
Confidence 5444 33445678888999999999984311 11122322 2222222 344555543 344 47899999999
Q ss_pred CCCeEeecC----CCCH-HHHHHHHHHcC
Q 018508 157 GPQGVMFPM----IDSP-EAAKEAVSYCR 180 (355)
Q Consensus 157 Ga~GImvP~----Vesa-eea~~vv~a~~ 180 (355)
|++||+|=- ..++ +.++++++.++
T Consensus 200 GAdgViVGSAi~~a~dp~~~~~~l~~~v~ 228 (264)
T 1xm3_A 200 GADGVLLNTAVSGADDPVKMARAMKLAVE 228 (264)
T ss_dssp TCSEEEESHHHHTSSSHHHHHHHHHHHHH
T ss_pred CCCEEEEcHHHhCCCCHHHHHHHHHHHHH
Confidence 999988631 1233 44556665554
No 281
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=73.00 E-value=9.3 Score=38.46 Aligned_cols=70 Identities=16% Similarity=0.149 Sum_probs=47.1
Q ss_pred ecCCHHHHHHhhhcCCcEEEEeCCCCC------------CCHHHHHHHHHHHHhC------CCCeEE--cCCCCCHHHHH
Q 018508 92 LSFSPTLAEISGLAGYDFVVVDMEHGP------------GGISDALACLHALAAT------GTPAIL--RLPESCPTWAK 151 (355)
Q Consensus 92 ~~~sp~~~e~aa~~G~D~vilDlEh~~------------~~~~~a~~~i~a~~~~------g~~~iV--RV~~~~~~~i~ 151 (355)
+..+++.++.+..+|+|++.+-.+-+. .......++..++... +.+++. .|. ++..+.
T Consensus 291 ~V~t~~~a~~l~~aGad~I~Vg~~~g~~~~~r~~~~~g~p~~~~l~~v~~~~~~~~~~~~~~ipvia~GGi~--~~~di~ 368 (503)
T 1me8_A 291 NIVDGEGFRYLADAGADFIKIGIGGGSICITREQKGIGRGQATAVIDVVAERNKYFEETGIYIPVCSDGGIV--YDYHMT 368 (503)
T ss_dssp EECSHHHHHHHHHHTCSEEEECSSCSTTCCSTTTTCCCCCHHHHHHHHHHHHHHHHHHHSEECCEEEESCCC--SHHHHH
T ss_pred cccCHHHHHHHHHhCCCeEEecccCCcCcccccccCCCCchHHHHHHHHHHHHHHhhhcCCCceEEEeCCCC--CHHHHH
Confidence 567888999999999999999554431 1112222333333322 466655 443 477899
Q ss_pred HHHhcCCCeEee
Q 018508 152 KALDLGPQGVMF 163 (355)
Q Consensus 152 ~aLdaGa~GImv 163 (355)
++|.+||++|++
T Consensus 369 kAlalGA~~V~i 380 (503)
T 1me8_A 369 LALAMGADFIML 380 (503)
T ss_dssp HHHHTTCSEEEE
T ss_pred HHHHcCCCEEEE
Confidence 999999999997
No 282
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=72.74 E-value=29 Score=35.71 Aligned_cols=135 Identities=14% Similarity=0.021 Sum_probs=79.5
Q ss_pred EcCCCCCHHHHHHHHhcCCCeEee--cCCCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEE
Q 018508 140 LRLPESCPTWAKKALDLGPQGVMF--PMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMC 217 (355)
Q Consensus 140 VRV~~~~~~~i~~aLdaGa~GImv--P~Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~ 217 (355)
|.+++.....+..++++|++-|++ .+.++... .+.++.++.. ..+-..+.-
T Consensus 276 Vgv~~d~~eR~~aLv~AGvD~iviD~ahGhs~~v-~~~i~~ik~~--------------------------~p~~~viaG 328 (556)
T 4af0_A 276 IGTRPGDKDRLKLLAEAGLDVVVLDSSQGNSVYQ-IEFIKWIKQT--------------------------YPKIDVIAG 328 (556)
T ss_dssp ECSSHHHHHHHHHHHHTTCCEEEECCSCCCSHHH-HHHHHHHHHH--------------------------CTTSEEEEE
T ss_pred eccCccHHHHHHHHHhcCCcEEEEeccccccHHH-HHHHHHHHhh--------------------------CCcceEEec
Confidence 444433334567788999998775 44454333 3444444310 012245667
Q ss_pred EEccHHHHHHHHHHhccCCccEEEEChhhHHhhc-CCCCCCCCHHHHHHHHHHHHHHHhCCCcee-ecccCCchhHHHHH
Q 018508 218 QVESEEGVKRAEDIAAVDGVDCVQMGPLDLSASM-GYLWDPGHRKVREMMRVAEKGVLGGGKAYL-AGFAMPHDAPLEMK 295 (355)
Q Consensus 218 mIET~~av~nieeIaavpgVD~l~iGp~DLs~sl-G~~~~~~~p~v~~ai~~iv~aa~a~g~~~~-g~~~~d~~~a~~~~ 295 (355)
.|-|+++...+-+ + |+|+|-+|.+==|... ..--...-|.+ .++..+.+++++.|++++ +|=...+-+..+.+
T Consensus 329 NVaT~e~a~~Li~--a--GAD~vkVGiGpGSiCtTr~v~GvG~PQ~-tAi~~~a~~a~~~~vpvIADGGI~~sGDi~KAl 403 (556)
T 4af0_A 329 NVVTREQAAQLIA--A--GADGLRIGMGSGSICITQEVMAVGRPQG-TAVYAVAEFASRFGIPCIADGGIGNIGHIAKAL 403 (556)
T ss_dssp EECSHHHHHHHHH--H--TCSEEEECSSCSTTBCCTTTCCSCCCHH-HHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHH
T ss_pred cccCHHHHHHHHH--c--CCCEEeecCCCCcccccccccCCCCcHH-HHHHHHHHHHHHcCCCEEecCCcCcchHHHHHh
Confidence 9999999988765 2 7888887654212211 00001123454 466677888888887743 22223445566778
Q ss_pred HCCCCEEEecc
Q 018508 296 SRGYHMVSGAV 306 (355)
Q Consensus 296 ~~G~~~vs~~~ 306 (355)
..|.++|.+|+
T Consensus 404 aaGAd~VMlGs 414 (556)
T 4af0_A 404 ALGASAVMMGG 414 (556)
T ss_dssp HTTCSEEEEST
T ss_pred hcCCCEEEEch
Confidence 99999999985
No 283
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=72.56 E-value=51 Score=29.17 Aligned_cols=173 Identities=10% Similarity=0.073 Sum_probs=93.9
Q ss_pred chHHHHHHHcCCcEEEEEEecCC---HHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHH-HhCCCCeEEcCC-CCCH
Q 018508 73 PESLKYRLQSNETLYGLFLLSFS---PTLAEISGLAGYDFVVVDMEHGPGGISDALACLHAL-AATGTPAILRLP-ESCP 147 (355)
Q Consensus 73 ~n~lk~~L~~G~~~~gl~v~~~s---p~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~-~~~g~~~iVRV~-~~~~ 147 (355)
...+.++|.. .+++-+.-..+- ...++.+...|.+++=+.+-+ +... +.++.+ +..+ ..+|... -...
T Consensus 6 ~~~~~~~l~~-~~~i~v~r~~~~~~~~~~~~al~~gGv~~iel~~k~-~~~~----~~i~~l~~~~~-~~~vgagtvi~~ 78 (214)
T 1wbh_A 6 KTSAESILTT-GPVVPVIVVKKLEHAVPMAKALVAGGVRVLNVTLRT-ECAV----DAIRAIAKEVP-EAIVGAGTVLNP 78 (214)
T ss_dssp SSCHHHHHHS-CSEEEEECCSSGGGHHHHHHHHHHTTCCEEEEESCS-TTHH----HHHHHHHHHCT-TSEEEEESCCSH
T ss_pred HHHHHHHHHH-CCEEEEEECCCHHHHHHHHHHHHHcCCCEEEEeCCC-hhHH----HHHHHHHHHCc-CCEEeeCEEEEH
Confidence 3446667765 555555543322 246788889999999999643 3222 333322 1222 2222211 1245
Q ss_pred HHHHHHHhcCCCeEeecCCCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEEccHHHHHH
Q 018508 148 TWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKR 227 (355)
Q Consensus 148 ~~i~~aLdaGa~GImvP~Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mIET~~av~n 227 (355)
..+..++++||++|+.|.. +.+ + .++++. +| +.+++-+.|++=+..
T Consensus 79 d~~~~A~~aGAd~v~~p~~-d~~-v---~~~~~~-----------------~g------------~~~i~G~~t~~e~~~ 124 (214)
T 1wbh_A 79 QQLAEVTEAGAQFAISPGL-TEP-L---LKAATE-----------------GT------------IPLIPGISTVSELML 124 (214)
T ss_dssp HHHHHHHHHTCSCEEESSC-CHH-H---HHHHHH-----------------SS------------SCEEEEESSHHHHHH
T ss_pred HHHHHHHHcCCCEEEcCCC-CHH-H---HHHHHH-----------------hC------------CCEEEecCCHHHHHH
Confidence 7889999999999999963 332 2 222221 00 123334778765544
Q ss_pred HHHHhccCCccEEEEChhhHHhhcCCCCCC-CCHHHHHHHHHHHHHHHhCCCce--eecccCCchhHHHHHHC-CCCEEE
Q 018508 228 AEDIAAVDGVDCVQMGPLDLSASMGYLWDP-GHRKVREMMRVAEKGVLGGGKAY--LAGFAMPHDAPLEMKSR-GYHMVS 303 (355)
Q Consensus 228 ieeIaavpgVD~l~iGp~DLs~slG~~~~~-~~p~v~~ai~~iv~aa~a~g~~~--~g~~~~d~~~a~~~~~~-G~~~vs 303 (355)
+.+ .|.|.|-+ + +... ..++.+..+. ... .++++ .||+ +++.+..+++. |...+.
T Consensus 125 A~~----~Gad~v~~----F------pa~~~gG~~~lk~i~---~~~--~~ipvvaiGGI--~~~n~~~~l~agg~~~v~ 183 (214)
T 1wbh_A 125 GMD----YGLKEFKF----F------PAEANGGVKALQAIA---GPF--SQVRFCPTGGI--SPANYRDYLALKSVLCIG 183 (214)
T ss_dssp HHH----TTCCEEEE----T------TTTTTTHHHHHHHHH---TTC--TTCEEEEBSSC--CTTTHHHHHTSTTBSCEE
T ss_pred HHH----CCCCEEEE----e------cCccccCHHHHHHHh---hhC--CCCeEEEECCC--CHHHHHHHHhcCCCeEEE
Confidence 432 37888877 1 1111 1233322221 111 13443 4444 56788999998 888888
Q ss_pred ecchH
Q 018508 304 GAVDV 308 (355)
Q Consensus 304 ~~~D~ 308 (355)
++..
T Consensus 184 -gS~i 187 (214)
T 1wbh_A 184 -GSWL 187 (214)
T ss_dssp -EGGG
T ss_pred -eccc
Confidence 6554
No 284
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=72.55 E-value=13 Score=35.17 Aligned_cols=102 Identities=17% Similarity=0.160 Sum_probs=68.7
Q ss_pred CchHHHHHHHcCCcEEEEEEecC--CHH----HHHHhhhcCCcEEEEeCCCCCCC-HHHHHHHHHHHHh-CCCCeEEcCC
Q 018508 72 SPESLKYRLQSNETLYGLFLLSF--SPT----LAEISGLAGYDFVVVDMEHGPGG-ISDALACLHALAA-TGTPAILRLP 143 (355)
Q Consensus 72 ~~n~lk~~L~~G~~~~gl~v~~~--sp~----~~e~aa~~G~D~vilDlEh~~~~-~~~a~~~i~a~~~-~g~~~iVRV~ 143 (355)
.|.++.++|+..++.+-..+--. .+. .++.+..+|.|+|+|- -++..+ .+...+++.+++. ...++++.-|
T Consensus 26 ~~~~~~~~l~~~~~~~~~liDPdK~~~~~~~~~~~~~~~sGtDai~VG-S~~vt~~~~~~~~~v~~ik~~~~lPvil~fP 104 (286)
T 3vk5_A 26 RPGRVLARLREHQPGPVHIIDPFKVPVTEAVEKAAELTRLGFAAVLLA-STDYESFESHMEPYVAAVKAATPLPVVLHFP 104 (286)
T ss_dssp SCCHHHHHHHHSCCEEEEEECTTTSCHHHHHHHHHHHHHTTCSCEEEE-CSCCSSHHHHHHHHHHHHHHHCSSCEEEECC
T ss_pred CchHHHHHHHhccCCceEEECCCCCCcHHHHHHHHHHHhcCCCEEEEc-cCCCCcchHHHHHHHHHHHHhCCCCEEEECC
Confidence 36777788877676555444211 222 4677888999999999 555432 5677888888876 7888888344
Q ss_pred -CC-CHHHHHHHHhcCCCeEeecCCCCHHHHHHHHHH
Q 018508 144 -ES-CPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSY 178 (355)
Q Consensus 144 -~~-~~~~i~~aLdaGa~GImvP~Vesaeea~~vv~a 178 (355)
.. +.. .+..|+|++++|.|=+..+...++.+
T Consensus 105 P~~g~~~----~i~~~aDa~l~psvlNs~n~~~i~g~ 137 (286)
T 3vk5_A 105 PRPGAGF----PVVRGADALLLPALLGSGDDYFVWKS 137 (286)
T ss_dssp CBTTTBS----CCCTTCSEEEEEEETTBSSHHHHTHH
T ss_pred CCCCCcc----ccccCCCEEEEEEEecCCCcccccCc
Confidence 11 111 22459999999999887777766665
No 285
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=71.96 E-value=18 Score=32.20 Aligned_cols=62 Identities=15% Similarity=0.056 Sum_probs=38.6
Q ss_pred HHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHHHhcCCCeE
Q 018508 96 PTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGV 161 (355)
Q Consensus 96 p~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~aLdaGa~GI 161 (355)
.+.++.+..+|+|+|++..+.. ++.+..++.++..|...++=++...+....+.+..+++++
T Consensus 98 ~~~~~~~~~~Gad~v~~~~~~~----~~~~~~~~~~~~~g~~~~~~i~~~t~~e~~~~~~~~~d~~ 159 (248)
T 1geq_A 98 RNFLAEAKASGVDGILVVDLPV----FHAKEFTEIAREEGIKTVFLAAPNTPDERLKVIDDMTTGF 159 (248)
T ss_dssp HHHHHHHHHHTCCEEEETTCCG----GGHHHHHHHHHHHTCEEEEEECTTCCHHHHHHHHHHCSSE
T ss_pred HHHHHHHHHCCCCEEEECCCCh----hhHHHHHHHHHHhCCCeEEEECCCCHHHHHHHHHhcCCCe
Confidence 3788999999999999964432 3455666666666766665555544444333444446643
No 286
>2ayx_A Sensor kinase protein RCSC; two independent structural domains, transferase; NMR {Escherichia coli} SCOP: c.23.1.1 c.23.1.6 PDB: 2ayz_A 2ayy_A
Probab=71.84 E-value=40 Score=29.83 Aligned_cols=101 Identities=12% Similarity=0.023 Sum_probs=61.6
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKA 153 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~a 153 (355)
..+++.|..-...+ ..-.+..+..+.+....+|.|++|++-...+--++...++... ...++++=....+.....++
T Consensus 143 ~~l~~~L~~~g~~v--~~a~~~~eal~~l~~~~~dlvl~D~~mp~~~G~~l~~~ir~~~-~~~piI~lt~~~~~~~~~~~ 219 (254)
T 2ayx_A 143 RLLADQLGSLGYQC--KTANDGVDALNVLSKNHIDIVLSDVNMPNMDGYRLTQRIRQLG-LTLPVIGVTANALAEEKQRC 219 (254)
T ss_dssp HHHHHHHHHHTSEE--EEECCSHHHHHHHHHSCCSEEEEEESSCSSCCHHHHHHHHHHH-CCSCEEEEESSTTSHHHHHH
T ss_pred HHHHHHHHHcCCEE--EEECCHHHHHHHHHhCCCCEEEEcCCCCCCCHHHHHHHHHhcC-CCCcEEEEECCCCHHHHHHH
Confidence 34666665422222 2334455667777778899999999875433233333444322 24455544444456678889
Q ss_pred HhcCCCeEeecCCCCHHHHHHHHHH
Q 018508 154 LDLGPQGVMFPMIDSPEAAKEAVSY 178 (355)
Q Consensus 154 LdaGa~GImvP~Vesaeea~~vv~a 178 (355)
+++|+++++ +|=-+.+++...++.
T Consensus 220 ~~~G~~~~l-~KP~~~~~L~~~l~~ 243 (254)
T 2ayx_A 220 LESGMDSCL-SKPVTLDVIKQTLTL 243 (254)
T ss_dssp HHCCCEEEE-ESSCCHHHHHHHHHH
T ss_pred HHcCCceEE-ECCCCHHHHHHHHHH
Confidence 999998865 444567888766654
No 287
>1yio_A Response regulatory protein; transcription regulation, DNA binding protein; 2.20A {Pseudomonas fluorescens} SCOP: a.4.6.2 c.23.1.1 PDB: 1zn2_A
Probab=71.71 E-value=20 Score=30.07 Aligned_cols=102 Identities=18% Similarity=0.140 Sum_probs=59.7
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKA 153 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~a 153 (355)
..++..|..-...+. .-.+..+..+.+....+|.|++|+.-...+--++...++.. ....++++=....+...+.++
T Consensus 18 ~~l~~~L~~~g~~v~--~~~~~~~al~~~~~~~~dlvl~D~~lp~~~g~~~~~~l~~~-~~~~~ii~ls~~~~~~~~~~a 94 (208)
T 1yio_A 18 EGLRNLLRSAGFEVE--TFDCASTFLEHRRPEQHGCLVLDMRMPGMSGIELQEQLTAI-SDGIPIVFITAHGDIPMTVRA 94 (208)
T ss_dssp HHHHHHHHTTTCEEE--EESSHHHHHHHCCTTSCEEEEEESCCSSSCHHHHHHHHHHT-TCCCCEEEEESCTTSCCCHHH
T ss_pred HHHHHHHHhCCceEE--EcCCHHHHHHhhhccCCCEEEEeCCCCCCCHHHHHHHHHhc-CCCCCEEEEeCCCCHHHHHHH
Confidence 456677765333222 22233445566667779999999986544433333333331 234455554444455567889
Q ss_pred HhcCCCeEeecCCCCHHHHHHHHHHc
Q 018508 154 LDLGPQGVMFPMIDSPEAAKEAVSYC 179 (355)
Q Consensus 154 LdaGa~GImvP~Vesaeea~~vv~a~ 179 (355)
++.|+++++ ++--+.+++...++.+
T Consensus 95 ~~~Ga~~~l-~Kp~~~~~L~~~i~~~ 119 (208)
T 1yio_A 95 MKAGAIEFL-PKPFEEQALLDAIEQG 119 (208)
T ss_dssp HHTTEEEEE-ESSCCHHHHHHHHHHH
T ss_pred HHCCCcEEE-eCCCCHHHHHHHHHHH
Confidence 999998865 3445778877666554
No 288
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=71.59 E-value=42 Score=31.61 Aligned_cols=92 Identities=11% Similarity=0.149 Sum_probs=54.7
Q ss_pred EEEEEcc----HHHHHHHHHHhccCCccEEEEChhhHHhhcCCCCCCCCHHHHHHHHHHHHHH-HhCCCceeecccCCch
Q 018508 215 IMCQVES----EEGVKRAEDIAAVDGVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVAEKGV-LGGGKAYLAGFAMPHD 289 (355)
Q Consensus 215 vi~mIET----~~av~nieeIaavpgVD~l~iGp~DLs~slG~~~~~~~p~v~~ai~~iv~aa-~a~g~~~~g~~~~d~~ 289 (355)
+=++||| .+-+..+-+|+.--|.|+|=-. .|.......++-.+.+.++++.. ..-++++.||+. +.+
T Consensus 176 lKVIlEt~~Lt~eei~~A~~ia~eaGADfVKTS-------TGf~~~GAT~edv~lmr~~v~~~g~~v~VKAAGGIr-t~e 247 (288)
T 3oa3_A 176 LKVILETSQLTADEIIAGCVLSSLAGADYVKTS-------TGFNGPGASIENVSLMSAVCDSLQSETRVKASGGIR-TIE 247 (288)
T ss_dssp EEEECCGGGCCHHHHHHHHHHHHHTTCSEEECC-------CSSSSCCCCHHHHHHHHHHHHHSSSCCEEEEESSCC-SHH
T ss_pred ceEEEECCCCCHHHHHHHHHHHHHcCCCEEEcC-------CCCCCCCCCHHHHHHHHHHHHHhCCCceEEEeCCCC-CHH
Confidence 5566777 3445555556644588877443 23321112233345555555321 123445667764 568
Q ss_pred hHHHHHHCCCCEEEecchHHHHHHH
Q 018508 290 APLEMKSRGYHMVSGAVDVGLFRSA 314 (355)
Q Consensus 290 ~a~~~~~~G~~~vs~~~D~~ll~~~ 314 (355)
++..+++.|.+.+-.++-..++.++
T Consensus 248 dAl~mi~aGA~RiGtS~g~~I~~~~ 272 (288)
T 3oa3_A 248 DCVKMVRAGAERLGASAGVKIVNET 272 (288)
T ss_dssp HHHHHHHTTCSEEEESCHHHHHHHH
T ss_pred HHHHHHHcCCceeehhhHHHHHHHH
Confidence 8999999999988888877777664
No 289
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=71.44 E-value=17 Score=36.86 Aligned_cols=86 Identities=19% Similarity=0.222 Sum_probs=47.8
Q ss_pred CCCCeEEcCCCCCHHHHHHHHhcCCCeEeecCC---------CCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCcc
Q 018508 134 TGTPAILRLPESCPTWAKKALDLGPQGVMFPMI---------DSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEG 204 (355)
Q Consensus 134 ~g~~~iVRV~~~~~~~i~~aLdaGa~GImvP~V---------esaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~ 204 (355)
.+.+++|+-- ......+++.++|+++|.|-.- .+.+-+.++.++++- ++.
T Consensus 342 ~~~PvivKgv-~~~e~A~~a~~aGad~I~vs~hgG~~~d~~~~~~~~l~~v~~~v~~-----~~~--------------- 400 (511)
T 1kbi_A 342 TKLPIVIKGV-QRTEDVIKAAEIGVSGVVLSNHGGRQLDFSRAPIEVLAETMPILEQ-----RNL--------------- 400 (511)
T ss_dssp CSSCEEEEEE-CSHHHHHHHHHTTCSEEEECCTTTTSSTTCCCHHHHHHHHHHHHHT-----TTC---------------
T ss_pred hCCcEEEEeC-CCHHHHHHHHHcCCCEEEEcCCCCccCCCCCchHHHHHHHHHHHHh-----hcc---------------
Confidence 5677888721 2366678888889998888210 011223333333321 000
Q ss_pred ccccCCCceEEEEEEccHHHHHHHHHHhccCCccEEEEChhhH
Q 018508 205 YLSNYEEELLIMCQVESEEGVKRAEDIAAVDGVDCVQMGPLDL 247 (355)
Q Consensus 205 y~~~~n~~i~vi~mIET~~av~nieeIaavpgVD~l~iGp~DL 247 (355)
..++.|++.=--..+.+-+..|+. |.|+|++|..=|
T Consensus 401 -----~~~ipVia~GGI~~g~Dv~kaLal--GAdaV~iGr~~l 436 (511)
T 1kbi_A 401 -----KDKLEVFVDGGVRRGTDVLKALCL--GAKGVGLGRPFL 436 (511)
T ss_dssp -----BTTBEEEEESSCCSHHHHHHHHHH--TCSEEEECHHHH
T ss_pred -----CCCcEEEEECCCCCHHHHHHHHHc--CCCEEEECHHHH
Confidence 124566664434444455556664 899999998544
No 290
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=71.41 E-value=29 Score=25.83 Aligned_cols=101 Identities=10% Similarity=-0.048 Sum_probs=59.9
Q ss_pred hHHHHHHHcCCcEEEEEEecCC-HHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFS-PTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKK 152 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~s-p~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~ 152 (355)
..+++.|......+. ...+ .+..+.+....+|.+++|+.-...+--+....++.. ....++++=....+.....+
T Consensus 14 ~~l~~~l~~~g~~v~---~~~~~~~a~~~~~~~~~dlil~D~~l~~~~g~~~~~~l~~~-~~~~~ii~~s~~~~~~~~~~ 89 (121)
T 2pl1_A 14 HHLKVQIQDAGHQVD---DAEDAKEADYYLNEHIPDIAIVDLGLPDEDGLSLIRRWRSN-DVSLPILVLTARESWQDKVE 89 (121)
T ss_dssp HHHHHHHHHTTCEEE---EESSHHHHHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHHT-TCCSCEEEEESCCCHHHHHH
T ss_pred HHHHHHHhhcCCEEE---EeCCHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHhc-CCCCCEEEEecCCCHHHHHH
Confidence 346666664333222 2334 345566667789999999987544433333333321 22345555445556677888
Q ss_pred HHhcCCCeEeecCCCCHHHHHHHHHHc
Q 018508 153 ALDLGPQGVMFPMIDSPEAAKEAVSYC 179 (355)
Q Consensus 153 aLdaGa~GImvP~Vesaeea~~vv~a~ 179 (355)
+++.|+++++. |--+.+++...++.+
T Consensus 90 ~~~~g~~~~l~-kp~~~~~l~~~i~~~ 115 (121)
T 2pl1_A 90 VLSAGADDYVT-KPFHIEEVMARMQAL 115 (121)
T ss_dssp HHHTTCSEEEE-SSCCHHHHHHHHHHH
T ss_pred HHHcCccceEE-CCCCHHHHHHHHHHH
Confidence 99999998653 445678877666543
No 291
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=71.35 E-value=10 Score=34.43 Aligned_cols=55 Identities=24% Similarity=0.291 Sum_probs=31.4
Q ss_pred CCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHHHhcCC----CeEeecCCCCHHHHHHHHH
Q 018508 118 PGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGP----QGVMFPMIDSPEAAKEAVS 177 (355)
Q Consensus 118 ~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~aLdaGa----~GImvP~Vesaeea~~vv~ 177 (355)
..+.++++..+.+ |..-+| .|..+++.++.+.+.|. +|.++|-|.|++|+.++.+
T Consensus 72 Vlt~~~a~~ai~A----GA~fiv-sP~~~~evi~~~~~~~v~~~~~~~~~PG~~TptE~~~A~~ 130 (217)
T 3lab_A 72 VCTADDFQKAIDA----GAQFIV-SPGLTPELIEKAKQVKLDGQWQGVFLPGVATASEVMIAAQ 130 (217)
T ss_dssp CCSHHHHHHHHHH----TCSEEE-ESSCCHHHHHHHHHHHHHCSCCCEEEEEECSHHHHHHHHH
T ss_pred ccCHHHHHHHHHc----CCCEEE-eCCCcHHHHHHHHHcCCCccCCCeEeCCCCCHHHHHHHHH
Confidence 3455555555443 333222 24456666666555544 5677888888887776654
No 292
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=70.97 E-value=72 Score=30.23 Aligned_cols=176 Identities=16% Similarity=0.153 Sum_probs=99.9
Q ss_pred CcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCC--HHHHHHHHHHHHhCCCCeE---EcCCCCCHHHHHHHHhcCC
Q 018508 84 ETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGG--ISDALACLHALAATGTPAI---LRLPESCPTWAKKALDLGP 158 (355)
Q Consensus 84 ~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~--~~~a~~~i~a~~~~g~~~i---VRV~~~~~~~i~~aLdaGa 158 (355)
-|+.--.=...+.+.+..+..+||..|+||.-|-|++ .+..++.+..+...|..+= =+|.+.+
T Consensus 75 VPValHLDHg~~~e~~~~ai~~GFtSVMiDgS~~p~eeNi~~Tk~vv~~ah~~gvsVEaELG~igG~E------------ 142 (307)
T 3n9r_A 75 IPVALHLDHGTTFESCEKAVKAGFTSVMIDASHHAFEENLELTSKVVKMAHNAGVSVEAELGRLMGIE------------ 142 (307)
T ss_dssp SCEEEEEEEECSHHHHHHHHHHTCSEEEECCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCCCCC-------------
T ss_pred CcEEEECCCCCCHHHHHHHHHhCCCcEEEECCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeecccc------------
Confidence 4444333456788999999999999999999999864 2333455555555555431 1232221
Q ss_pred CeEee----cCCCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCC-ccccccCCCceEEEEEEccHHHHHHHHHHhc
Q 018508 159 QGVMF----PMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGID-EGYLSNYEEELLIMCQVESEEGVKRAEDIAA 233 (355)
Q Consensus 159 ~GImv----P~Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~-~~y~~~~n~~i~vi~mIET~~av~nieeIaa 233 (355)
+++.. -.-.+|+|++++++... .- .-|..+|+. ..|-...+..+ . ++.+++|.+
T Consensus 143 d~~~~~~~~~~yT~Peea~~Fv~~Tg-----vD------~LAvaiGt~HG~Yk~~~~p~L-------d---~~~L~~I~~ 201 (307)
T 3n9r_A 143 DNISVDEKDAVLVNPKEAEQFVKESQ-----VD------YLAPAIGTSHGAFKFKGEPKL-------D---FERLQEVKR 201 (307)
T ss_dssp ---------CCSCCHHHHHHHHHHHC-----CS------EEEECSSCCSSSBCCSSSCCC-------C---HHHHHHHHH
T ss_pred CCcccccccccCCCHHHHHHHHHHHC-----CC------EEEEecCCcccccCCCCCCcc-------C---HHHHHHHHh
Confidence 12211 12478999999998753 11 122334432 12321111111 2 233444433
Q ss_pred cCCccEEEEChhhHHhhcCCCCCCCCHHHHHHHHHHHHHHHhCCCceeecccCCchhHHHHHHCCCCEEEecchHHH
Q 018508 234 VDGVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVAEKGVLGGGKAYLAGFAMPHDAPLEMKSRGYHMVSGAVDVGL 310 (355)
Q Consensus 234 vpgVD~l~iGp~DLs~slG~~~~~~~p~v~~ai~~iv~aa~a~g~~~~g~~~~d~~~a~~~~~~G~~~vs~~~D~~l 310 (355)
.+++-.|+=|.. +. | +..++.+++.|+..-+....+.++.++.++.|+.-+.+.+|..+
T Consensus 202 ~~~~PLVlHGgS------~v------p------~~~~~~~~~~gg~~~~~~G~p~e~i~~ai~~GV~KiNi~Tdl~~ 260 (307)
T 3n9r_A 202 LTNIPLVLHGAS------AI------P------DNVRKSYLDAGGDLKGSKGVPFEFLQESVKGGINKVNTDTDLRI 260 (307)
T ss_dssp HHCSCEEESSCC------CC------C------HHHHHHHHHTTCCCTTCBCCCHHHHHHHHHTTEEEEEECHHHHH
T ss_pred cCCCCeEEeCCC------Cc------c------hHHHHHHHHhcCccCCCCCCCHHHHHHHHHcCceEEEechHHHH
Confidence 333445554532 11 1 23345667788876555555668899999999999999999743
No 293
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=70.73 E-value=15 Score=34.82 Aligned_cols=69 Identities=22% Similarity=0.124 Sum_probs=43.3
Q ss_pred ecCCHHHHHHhhhcCCcEEEEeCCCCCCCHH---H--------HHHHHHHH-HhCCCCeEE--cCCCCCHHHHHHHHhcC
Q 018508 92 LSFSPTLAEISGLAGYDFVVVDMEHGPGGIS---D--------ALACLHAL-AATGTPAIL--RLPESCPTWAKKALDLG 157 (355)
Q Consensus 92 ~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~---~--------a~~~i~a~-~~~g~~~iV--RV~~~~~~~i~~aLdaG 157 (355)
++.+++.++.+..+|+|+|++-. |+..... . ....+..+ +..+.+++. -|. +...+.++|..|
T Consensus 156 ~v~s~e~A~~a~~aGad~Ivvs~-hgG~~~~~~~~~~~g~~g~~~~~l~~v~~~~~ipVIa~GGI~--~g~Dv~kalalG 232 (336)
T 1ypf_A 156 NVGTPEAVRELENAGADATKVGI-GPGKVCITKIKTGFGTGGWQLAALRWCAKAASKPIIADGGIR--TNGDVAKSIRFG 232 (336)
T ss_dssp EECSHHHHHHHHHHTCSEEEECS-SCSTTCHHHHHHSCSSTTCHHHHHHHHHHTCSSCEEEESCCC--STHHHHHHHHTT
T ss_pred CcCCHHHHHHHHHcCCCEEEEec-CCCceeecccccCcCCchhHHHHHHHHHHHcCCcEEEeCCCC--CHHHHHHHHHcC
Confidence 36789999999999999999932 4421111 0 12222222 233555554 222 356788899999
Q ss_pred CCeEee
Q 018508 158 PQGVMF 163 (355)
Q Consensus 158 a~GImv 163 (355)
|++|++
T Consensus 233 AdaV~i 238 (336)
T 1ypf_A 233 ATMVMI 238 (336)
T ss_dssp CSEEEE
T ss_pred CCEEEe
Confidence 999987
No 294
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=70.56 E-value=42 Score=29.26 Aligned_cols=82 Identities=16% Similarity=0.062 Sum_probs=54.8
Q ss_pred CHH-HHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCC-CCCHHHHHHHHhcCCCeEee--------c
Q 018508 95 SPT-LAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLP-ESCPTWAKKALDLGPQGVMF--------P 164 (355)
Q Consensus 95 sp~-~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~-~~~~~~i~~aLdaGa~GImv--------P 164 (355)
.|. .++.++.+|+|+|.+..|-+ .+..+..++.++..|..+.|.+. .........+.+.|..-+++ |
T Consensus 68 ip~t~~~~~~~~Gad~itvh~~~g---~~~l~~~~~~~~~~g~~~~~~ll~~~t~~~~~~l~~~~~~~~vl~~a~~~~~~ 144 (216)
T 1q6o_A 68 AGKILSRMCFEANADWVTVICCAD---INTAKGALDVAKEFNGDVQIELTGYWTWEQAQQWRDAGIGQVVYHRSRDAQAA 144 (216)
T ss_dssp CHHHHHHHHHHTTCSEEEEETTSC---HHHHHHHHHHHHHTTCEEEEEECSCCCHHHHHHHHHTTCCEEEEECCHHHHHT
T ss_pred cHHHHHHHHHhCCCCEEEEeccCC---HHHHHHHHHHHHHcCCCceeeeeeCCChhhHHHHHhcCcHHHHHHHHHHHHhc
Confidence 454 45778899999999999976 34455666666667777766555 44333444444556665555 6
Q ss_pred CCC-CHHHHHHHHHHc
Q 018508 165 MID-SPEAAKEAVSYC 179 (355)
Q Consensus 165 ~Ve-saeea~~vv~a~ 179 (355)
-.. ++++++.+.+.+
T Consensus 145 G~~g~~~~i~~lr~~~ 160 (216)
T 1q6o_A 145 GVAWGEADITAIKRLS 160 (216)
T ss_dssp TCCCCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHhc
Confidence 555 588888887776
No 295
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=70.21 E-value=43 Score=27.26 Aligned_cols=102 Identities=18% Similarity=0.070 Sum_probs=64.5
Q ss_pred HHHHHHHc-CCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHh-CCCCeEEcCCCCCHHHHHH
Q 018508 75 SLKYRLQS-NETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAA-TGTPAILRLPESCPTWAKK 152 (355)
Q Consensus 75 ~lk~~L~~-G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~-~g~~~iVRV~~~~~~~i~~ 152 (355)
.+++.|+. |=..+. .-.+..+..+.+....+|.|++|+.=-..+--++...+++... ...++++=....+.....+
T Consensus 27 ~l~~~L~~~G~~~v~--~a~~g~~al~~~~~~~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~~~~~~~~~ 104 (134)
T 3to5_A 27 IVKNLLRDLGFNNTQ--EADDGLTALPMLKKGDFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEAKREQIIE 104 (134)
T ss_dssp HHHHHHHHTTCCCEE--EESSHHHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESSCCHHHHHH
T ss_pred HHHHHHHHcCCcEEE--EECCHHHHHHHHHhCCCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECCCCHHHHHH
Confidence 45666654 322222 1233445677788889999999998765554555555554322 3445555455556778899
Q ss_pred HHhcCCCeEeecCCCCHHHHHHHHHHc
Q 018508 153 ALDLGPQGVMFPMIDSPEAAKEAVSYC 179 (355)
Q Consensus 153 aLdaGa~GImvP~Vesaeea~~vv~a~ 179 (355)
++++|+++.+. |==+++++.+.++.+
T Consensus 105 ~~~~Ga~~yl~-KP~~~~~L~~~i~~~ 130 (134)
T 3to5_A 105 AAQAGVNGYIV-KPFTAATLKEKLDKI 130 (134)
T ss_dssp HHHTTCCEEEE-SSCCHHHHHHHHHHH
T ss_pred HHHCCCCEEEE-CCCCHHHHHHHHHHH
Confidence 99999988653 334678887766554
No 296
>4ecl_A Serine racemase, vantg; antibiotic resistance, vancomycin resistance, center for STR genomics of infectious diseases (csgid); HET: MSE; 2.02A {Enterococcus faecalis}
Probab=70.20 E-value=78 Score=30.31 Aligned_cols=81 Identities=11% Similarity=-0.015 Sum_probs=52.0
Q ss_pred CcEEEEEEec-----CCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCC-CeEEcCCCCCHHHHHHHHhcC
Q 018508 84 ETLYGLFLLS-----FSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGT-PAILRLPESCPTWAKKALDLG 157 (355)
Q Consensus 84 ~~~~gl~v~~-----~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~-~~iVRV~~~~~~~i~~aLdaG 157 (355)
...+..-+.. +.+..++.+...|++.+. ....+++..+.. .|. .+++-+....+..+..+++.+
T Consensus 30 ~~~l~avvKanaYGhg~~~va~~l~~~G~~~f~------va~~~Ea~~lr~----~G~~~~ilvlg~~~~~~~~~~~~~~ 99 (374)
T 4ecl_A 30 KCELMAVVKAEAYGHGMYEVTTYLEQIGVSSFA------VATIDEGIRLRK----YGISSEILILGYTSPSRAKELCKYE 99 (374)
T ss_dssp TCEEEEECHHHHHTTCHHHHHHHHHHTTCCEEE------ESSHHHHHHHHH----TTCCSEEEECSCCCGGGHHHHHHTT
T ss_pred CCEEEEEEccCccCCCHHHHHHHHHHCCCCEEE------EEEHHHHHHHHh----cCCCCCEEEEeCCCHHHHHHHHHCC
Confidence 3444444545 456777888889998654 245566655433 233 244445556666788888754
Q ss_pred CCeEeecCCCCHHHHHHHHHH
Q 018508 158 PQGVMFPMIDSPEAAKEAVSY 178 (355)
Q Consensus 158 a~GImvP~Vesaeea~~vv~a 178 (355)
+ .+.|+|.++++++.+.
T Consensus 100 ---i-~~~v~s~~~l~~l~~~ 116 (374)
T 4ecl_A 100 ---L-TQTLIDYRYSLLLNKQ 116 (374)
T ss_dssp ---C-EEEECCHHHHHHHHTT
T ss_pred ---C-EEEECCHHHHHHHHhc
Confidence 3 4789999999988765
No 297
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=70.07 E-value=28 Score=25.33 Aligned_cols=100 Identities=13% Similarity=-0.006 Sum_probs=55.8
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHh-CCCCeEEcCCCCCHHHHHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAA-TGTPAILRLPESCPTWAKK 152 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~-~g~~~iVRV~~~~~~~i~~ 152 (355)
..+++.|..-...+ ....+..+..+.+....+|.+++|+.....+-.+....++.... ...++++=.+..+.. .
T Consensus 15 ~~l~~~l~~~g~~v--~~~~~~~~~~~~l~~~~~dlii~d~~~~~~~~~~~~~~l~~~~~~~~~~ii~~~~~~~~~---~ 89 (119)
T 2j48_A 15 TVVCEMLTAAGFKV--IWLVDGSTALDQLDLLQPIVILMAWPPPDQSCLLLLQHLREHQADPHPPLVLFLGEPPVD---P 89 (119)
T ss_dssp HHHHHHHHHTTCEE--EEESCHHHHHHHHHHHCCSEEEEECSTTCCTHHHHHHHHHHTCCCSSCCCEEEESSCCSS---H
T ss_pred HHHHHHHHhCCcEE--EEecCHHHHHHHHHhcCCCEEEEecCCCCCCHHHHHHHHHhccccCCCCEEEEeCCCCch---h
Confidence 45666676433322 22223344556667778999999998765444344344433211 234444433333333 7
Q ss_pred HHhcCCCeEeecCCCCHHHHHHHHHHc
Q 018508 153 ALDLGPQGVMFPMIDSPEAAKEAVSYC 179 (355)
Q Consensus 153 aLdaGa~GImvP~Vesaeea~~vv~a~ 179 (355)
++..|+++++ ++--+.+++...++.+
T Consensus 90 ~~~~g~~~~l-~kp~~~~~l~~~l~~~ 115 (119)
T 2j48_A 90 LLTAQASAIL-SKPLDPQLLLTTLQGL 115 (119)
T ss_dssp HHHHHCSEEC-SSCSTTHHHHHHHHTT
T ss_pred hhhcCHHHhc-cCCCCHHHHHHHHHHH
Confidence 8889998865 4444566776666543
No 298
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=69.87 E-value=17 Score=32.09 Aligned_cols=72 Identities=8% Similarity=-0.201 Sum_probs=43.5
Q ss_pred ecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhC---CC---------CeEEcCCCC----C-HHHHHHHH
Q 018508 92 LSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAAT---GT---------PAILRLPES----C-PTWAKKAL 154 (355)
Q Consensus 92 ~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~---g~---------~~iVRV~~~----~-~~~i~~aL 154 (355)
.+.+|+.++.+..+|+|.|.+..+.-. +.+.+.+.++.+... +. .+.+| ... + ...++++.
T Consensus 82 gi~~~~~~~~~l~~Gad~V~lg~~~l~-~p~~~~~~~~~~g~~~~~~ld~~~~~~~~~v~~~-g~~~~~~~~~e~~~~~~ 159 (244)
T 2y88_A 82 GIRDDESLAAALATGCARVNVGTAALE-NPQWCARVIGEHGDQVAVGLDVQIIDGEHRLRGR-GWETDGGDLWDVLERLD 159 (244)
T ss_dssp SCCSHHHHHHHHHTTCSEEEECHHHHH-CHHHHHHHHHHHGGGEEEEEEEEEETTEEEEEEG-GGTEEEEEHHHHHHHHH
T ss_pred CCCCHHHHHHHHHcCCCEEEECchHhh-ChHHHHHHHHHcCCCEEEEEeccccCCCCEEEEC-CccCCCCCHHHHHHHHH
Confidence 457899999999999999999877532 233444444443210 11 11222 111 2 34568888
Q ss_pred hcCCCeEeecC
Q 018508 155 DLGPQGVMFPM 165 (355)
Q Consensus 155 daGa~GImvP~ 165 (355)
+.|++.|++--
T Consensus 160 ~~G~~~i~~~~ 170 (244)
T 2y88_A 160 SEGCSRFVVTD 170 (244)
T ss_dssp HTTCCCEEEEE
T ss_pred hCCCCEEEEEe
Confidence 99998887643
No 299
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=69.70 E-value=24 Score=35.69 Aligned_cols=79 Identities=19% Similarity=0.027 Sum_probs=47.4
Q ss_pred CCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCC-------CCHHHHHHHHHHHHh---CCCCeEEcCCCC-CHHHHH
Q 018508 83 NETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGP-------GGISDALACLHALAA---TGTPAILRLPES-CPTWAK 151 (355)
Q Consensus 83 G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~-------~~~~~a~~~i~a~~~---~g~~~iVRV~~~-~~~~i~ 151 (355)
+.|++-= ...+++.++.+..+|+|+|++.. |+. ...+.+..+..++.. .+..+++=-.+. +...+.
T Consensus 343 ~~PvivK--gv~~~e~A~~a~~aGad~I~vs~-hgG~~~d~~~~~~~~l~~v~~~v~~~~~~~~ipVia~GGI~~g~Dv~ 419 (511)
T 1kbi_A 343 KLPIVIK--GVQRTEDVIKAAEIGVSGVVLSN-HGGRQLDFSRAPIEVLAETMPILEQRNLKDKLEVFVDGGVRRGTDVL 419 (511)
T ss_dssp SSCEEEE--EECSHHHHHHHHHTTCSEEEECC-TTTTSSTTCCCHHHHHHHHHHHHHTTTCBTTBEEEEESSCCSHHHHH
T ss_pred CCcEEEE--eCCCHHHHHHHHHcCCCEEEEcC-CCCccCCCCCchHHHHHHHHHHHHhhccCCCcEEEEECCCCCHHHHH
Confidence 5564422 23468899999999999999965 543 122233333334321 122233223333 456788
Q ss_pred HHHhcCCCeEeec
Q 018508 152 KALDLGPQGVMFP 164 (355)
Q Consensus 152 ~aLdaGa~GImvP 164 (355)
++|..||++|++=
T Consensus 420 kaLalGAdaV~iG 432 (511)
T 1kbi_A 420 KALCLGAKGVGLG 432 (511)
T ss_dssp HHHHHTCSEEEEC
T ss_pred HHHHcCCCEEEEC
Confidence 9999999999873
No 300
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=69.55 E-value=44 Score=31.74 Aligned_cols=68 Identities=21% Similarity=0.289 Sum_probs=44.0
Q ss_pred HHHHHhhhcCCcEEEEeCCCC--------CC----------CHH-H---HHHHHHHHHh-C--CCCeEEcCCCC------
Q 018508 97 TLAEISGLAGYDFVVVDMEHG--------PG----------GIS-D---ALACLHALAA-T--GTPAILRLPES------ 145 (355)
Q Consensus 97 ~~~e~aa~~G~D~vilDlEh~--------~~----------~~~-~---a~~~i~a~~~-~--g~~~iVRV~~~------ 145 (355)
..++.+..+|||.|=|..-|+ |. +.+ . +.+.+++++. . ..++.||++..
T Consensus 156 ~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~pV~vRls~~~~~~~g 235 (349)
T 3hgj_A 156 EGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPRELPLFVRVSATDWGEGG 235 (349)
T ss_dssp HHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTSCEEEEEESCCCSTTS
T ss_pred HHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCceEEEEeccccccCCC
Confidence 345667789999999999995 21 111 1 3445666543 3 45789999863
Q ss_pred -CHHH----HHHHHhcCCCeEeec
Q 018508 146 -CPTW----AKKALDLGPQGVMFP 164 (355)
Q Consensus 146 -~~~~----i~~aLdaGa~GImvP 164 (355)
+... ++.+.+.|++.|-+.
T Consensus 236 ~~~~~~~~la~~L~~~Gvd~i~vs 259 (349)
T 3hgj_A 236 WSLEDTLAFARRLKELGVDLLDCS 259 (349)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEe
Confidence 2222 455667899988776
No 301
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=69.45 E-value=25 Score=35.20 Aligned_cols=70 Identities=27% Similarity=0.228 Sum_probs=45.9
Q ss_pred ecCCHHHHHHhhhcCCcEEEEeCCCCC---------CC--HHHHHHHHHHH-HhCCCCeEE--cCCCCCHHHHHHHHhcC
Q 018508 92 LSFSPTLAEISGLAGYDFVVVDMEHGP---------GG--ISDALACLHAL-AATGTPAIL--RLPESCPTWAKKALDLG 157 (355)
Q Consensus 92 ~~~sp~~~e~aa~~G~D~vilDlEh~~---------~~--~~~a~~~i~a~-~~~g~~~iV--RV~~~~~~~i~~aLdaG 157 (355)
...+++.++.+..+|+|+|.+-.+-+. .. .......+..+ +..+.+++. .|. ++..+.+++.+|
T Consensus 303 ~v~t~~~a~~l~~aGad~I~vg~~~G~~~~t~~~~~~g~~~~~~~~~~~~~~~~~~ipVia~GGI~--~~~di~kala~G 380 (514)
T 1jcn_A 303 NVVTAAQAKNLIDAGVDGLRVGMGCGSICITQEVMACGRPQGTAVYKVAEYARRFGVPIIADGGIQ--TVGHVVKALALG 380 (514)
T ss_dssp EECSHHHHHHHHHHTCSEEEECSSCSCCBTTBCCCSCCCCHHHHHHHHHHHHGGGTCCEEEESCCC--SHHHHHHHHHTT
T ss_pred ccchHHHHHHHHHcCCCEEEECCCCCcccccccccCCCccchhHHHHHHHHHhhCCCCEEEECCCC--CHHHHHHHHHcC
Confidence 457888999999999999999443221 11 23333444433 334555554 333 367899999999
Q ss_pred CCeEee
Q 018508 158 PQGVMF 163 (355)
Q Consensus 158 a~GImv 163 (355)
|++|++
T Consensus 381 Ad~V~i 386 (514)
T 1jcn_A 381 ASTVMM 386 (514)
T ss_dssp CSEEEE
T ss_pred CCeeeE
Confidence 999987
No 302
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=69.31 E-value=36 Score=26.00 Aligned_cols=103 Identities=14% Similarity=0.024 Sum_probs=60.0
Q ss_pred hHHHHHHHc-CCcEEEEEEecCCHHHHHHhhhc-CCcEEEEeCCCCCCCHHHHHHHHHHHHh-CCCCeEEcCCCCCHHHH
Q 018508 74 ESLKYRLQS-NETLYGLFLLSFSPTLAEISGLA-GYDFVVVDMEHGPGGISDALACLHALAA-TGTPAILRLPESCPTWA 150 (355)
Q Consensus 74 n~lk~~L~~-G~~~~gl~v~~~sp~~~e~aa~~-G~D~vilDlEh~~~~~~~a~~~i~a~~~-~g~~~iVRV~~~~~~~i 150 (355)
..+++.|.. |-..+. ...+..+..+.+... .+|.|++|+.-...+--++...++.... ...++++=....+....
T Consensus 19 ~~l~~~L~~~g~~~v~--~~~~~~~a~~~~~~~~~~dlvi~D~~~p~~~g~~~~~~lr~~~~~~~~pii~~s~~~~~~~~ 96 (129)
T 3h1g_A 19 RIIKNTLSRLGYEDVL--EAEHGVEAWEKLDANADTKVLITDWNMPEMNGLDLVKKVRSDSRFKEIPIIMITAEGGKAEV 96 (129)
T ss_dssp HHHHHHHHHTTCCCEE--EESSHHHHHHHHHHCTTCCEEEECSCCSSSCHHHHHHHHHTSTTCTTCCEEEEESCCSHHHH
T ss_pred HHHHHHHHHcCCcEEE--EeCCHHHHHHHHHhCCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCCeEEEEeCCCChHHH
Confidence 346666654 322222 223344555666554 6999999998654443333333332111 23445554455566778
Q ss_pred HHHHhcCCCeEeecCCCCHHHHHHHHHHc
Q 018508 151 KKALDLGPQGVMFPMIDSPEAAKEAVSYC 179 (355)
Q Consensus 151 ~~aLdaGa~GImvP~Vesaeea~~vv~a~ 179 (355)
.++++.|+++.+. |=-+.+++...++.+
T Consensus 97 ~~~~~~g~~~~l~-KP~~~~~L~~~l~~~ 124 (129)
T 3h1g_A 97 ITALKAGVNNYIV-KPFTPQVLKEKLEVV 124 (129)
T ss_dssp HHHHHHTCCEEEE-SCCCHHHHHHHHHHH
T ss_pred HHHHHcCccEEEe-CCCCHHHHHHHHHHH
Confidence 8999999998654 445788888777654
No 303
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=68.95 E-value=12 Score=30.33 Aligned_cols=80 Identities=10% Similarity=0.081 Sum_probs=48.9
Q ss_pred EEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHH-h-CCCCeEEcCCCCCHHHHHHHHhcCCCeEeecCCC
Q 018508 90 FLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALA-A-TGTPAILRLPESCPTWAKKALDLGPQGVMFPMID 167 (355)
Q Consensus 90 ~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~-~-~g~~~iVRV~~~~~~~i~~aLdaGa~GImvP~Ve 167 (355)
+....++...+.+.-.++|++++=+.+. +.....+..++ . ....+++|+++ +.....+..+|++-|+.|.-.
T Consensus 55 ~gd~~~~~~l~~a~i~~ad~vi~~~~~~----~~n~~~~~~a~~~~~~~~iiar~~~--~~~~~~l~~~G~d~vi~p~~~ 128 (140)
T 3fwz_A 55 LGNAANEEIMQLAHLECAKWLILTIPNG----YEAGEIVASARAKNPDIEIIARAHY--DDEVAYITERGANQVVMGERE 128 (140)
T ss_dssp ESCTTSHHHHHHTTGGGCSEEEECCSCH----HHHHHHHHHHHHHCSSSEEEEEESS--HHHHHHHHHTTCSEEEEHHHH
T ss_pred ECCCCCHHHHHhcCcccCCEEEEECCCh----HHHHHHHHHHHHHCCCCeEEEEECC--HHHHHHHHHCCCCEEECchHH
Confidence 3345566666666556677777655432 22222222332 2 35678999886 455566677999999999876
Q ss_pred CHHHHHHH
Q 018508 168 SPEAAKEA 175 (355)
Q Consensus 168 saeea~~v 175 (355)
.+..+.+.
T Consensus 129 ~a~~i~~~ 136 (140)
T 3fwz_A 129 IARTMLEL 136 (140)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66555443
No 304
>1s8n_A Putative antiterminator; RV1626, structural genomics, transcriptional antiterminator, component system, PSI; 1.48A {Mycobacterium tuberculosis} SCOP: c.23.1.1 PDB: 1sd5_A
Probab=68.92 E-value=30 Score=28.96 Aligned_cols=101 Identities=17% Similarity=0.104 Sum_probs=59.5
Q ss_pred hHHHHHHHc-CCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHH
Q 018508 74 ESLKYRLQS-NETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKK 152 (355)
Q Consensus 74 n~lk~~L~~-G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~ 152 (355)
..+++.|.. |-.+++.+ .+..+..+.+....+|.|++|+.-...+--++...++. ....++++=....+......
T Consensus 27 ~~l~~~L~~~g~~v~~~~--~~~~~al~~~~~~~~dlvi~D~~~p~~~g~~~~~~l~~--~~~~pii~lt~~~~~~~~~~ 102 (205)
T 1s8n_A 27 MDLAEMLREEGYEIVGEA--GDGQEAVELAELHKPDLVIMDVKMPRRDGIDAASEIAS--KRIAPIVVLTAFSQRDLVER 102 (205)
T ss_dssp HHHHHHHHHTTCEEEEEE--SSHHHHHHHHHHHCCSEEEEESSCSSSCHHHHHHHHHH--TTCSCEEEEEEGGGHHHHHT
T ss_pred HHHHHHHHHCCCEEEEEe--CCHHHHHHHHhhcCCCEEEEeCCCCCCChHHHHHHHHh--cCCCCEEEEecCCCHHHHHH
Confidence 456677764 32222222 23344556677778999999998765443333333333 22334444344445666788
Q ss_pred HHhcCCCeEeecCCCCHHHHHHHHHHc
Q 018508 153 ALDLGPQGVMFPMIDSPEAAKEAVSYC 179 (355)
Q Consensus 153 aLdaGa~GImvP~Vesaeea~~vv~a~ 179 (355)
+++.|+++++. +--+.+++...++.+
T Consensus 103 ~~~~ga~~~l~-KP~~~~~L~~~i~~~ 128 (205)
T 1s8n_A 103 ARDAGAMAYLV-KPFSISDLIPAIELA 128 (205)
T ss_dssp TGGGSCEEEEE-ESCCHHHHHHHHHHH
T ss_pred HHhcCCcEEEe-CCCCHHHHHHHHHHH
Confidence 99999988653 334678877666554
No 305
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=68.64 E-value=34 Score=31.30 Aligned_cols=81 Identities=17% Similarity=0.151 Sum_probs=47.8
Q ss_pred HHHHHHhhhcCCcEEEE---------eCCCC-------------CCCHHHHHHHHHHHHhCCCCeEEcCCCC-CHHHHHH
Q 018508 96 PTLAEISGLAGYDFVVV---------DMEHG-------------PGGISDALACLHALAATGTPAILRLPES-CPTWAKK 152 (355)
Q Consensus 96 p~~~e~aa~~G~D~vil---------DlEh~-------------~~~~~~a~~~i~a~~~~g~~~iVRV~~~-~~~~i~~ 152 (355)
.+.++.+...|+|+|.+ |.+.. +..+......++.+...-..+++=..+. ++..+.+
T Consensus 179 ~~~a~~l~~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i~~~~~ipvia~GGI~~~~d~~~ 258 (311)
T 1ep3_A 179 VPIAKAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKLIHQVAQDVDIPIIGMGGVANAQDVLE 258 (311)
T ss_dssp HHHHHHHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHHHTTCSSCEEECSSCCSHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchHHHHHHHHHHHHhcCCCEEEECCcCCHHHHHH
Confidence 45688899999999998 44211 1112223345554443223345545555 5778999
Q ss_pred HHhcCCCeEeec--CCCCHHHHHHHH
Q 018508 153 ALDLGPQGVMFP--MIDSPEAAKEAV 176 (355)
Q Consensus 153 aLdaGa~GImvP--~Vesaeea~~vv 176 (355)
++.+||++|++= .+.+++-++++.
T Consensus 259 ~l~~GAd~V~vg~~~l~~p~~~~~i~ 284 (311)
T 1ep3_A 259 MYMAGASAVAVGTANFADPFVCPKII 284 (311)
T ss_dssp HHHHTCSEEEECTHHHHCTTHHHHHH
T ss_pred HHHcCCCEEEECHHHHcCcHHHHHHH
Confidence 999999999863 223444444443
No 306
>3c3w_A Two component transcriptional regulatory protein; response regulator, two-component regulatory system, DNA-BIN protein; 2.20A {Mycobacterium tuberculosis}
Probab=68.60 E-value=11 Score=32.53 Aligned_cols=103 Identities=14% Similarity=-0.026 Sum_probs=58.7
Q ss_pred hHHHHHHHcCCcEEEEEEecCC-HHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFS-PTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKK 152 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~s-p~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~ 152 (355)
..+++.|..-. -+.......+ .+..+.+....+|.|++|+.-...+--++...++.. ....++++=....+...+..
T Consensus 15 ~~l~~~L~~~~-~~~vv~~~~~~~~al~~l~~~~~dlvllD~~lp~~~g~~~~~~lr~~-~~~~~ii~lt~~~~~~~~~~ 92 (225)
T 3c3w_A 15 RGLVDLLGADP-ELDVVGEAGSVAEAMARVPAARPDVAVLDVRLPDGNGIELCRDLLSR-MPDLRCLILTSYTSDEAMLD 92 (225)
T ss_dssp HHHHHHHHTCT-TEEEEEEESSHHHHHHHHHHHCCSEEEECSEETTEEHHHHHHHHHHH-CTTCEEEEGGGSSSHHHHHH
T ss_pred HHHHHHHhcCC-CcEEEEEECCHHHHHHHHhhcCCCEEEEeCCCCCCCHHHHHHHHHHh-CCCCcEEEEECCCCHHHHHH
Confidence 34666676422 1221112334 445666777789999999975433323333333332 23445555455556777889
Q ss_pred HHhcCCCeEeecCCCCHHHHHHHHHHc
Q 018508 153 ALDLGPQGVMFPMIDSPEAAKEAVSYC 179 (355)
Q Consensus 153 aLdaGa~GImvP~Vesaeea~~vv~a~ 179 (355)
+++.|+++++. |--+.+++...++.+
T Consensus 93 ~~~~Ga~~~l~-Kp~~~~~L~~~i~~~ 118 (225)
T 3c3w_A 93 AILAGASGYVV-KDIKGMELARAVKDV 118 (225)
T ss_dssp HHHHTCCCHHH-HHHHHHHHHHHHHHH
T ss_pred HHHCCCCEEEE-CCCCHHHHHHHHHHH
Confidence 99999998653 333566666555544
No 307
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=68.46 E-value=20 Score=33.67 Aligned_cols=71 Identities=17% Similarity=0.036 Sum_probs=52.2
Q ss_pred cEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHHHhcCCCeEee
Q 018508 85 TLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMF 163 (355)
Q Consensus 85 ~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~aLdaGa~GImv 163 (355)
..++. ...+.+.++.+...|+|+|.+|- ...++.++.++.+. +..+++=+.+.+...+....+.|+++|.+
T Consensus 197 ~~IgV--ev~t~eea~eA~~aGaD~I~ld~----~~~~~~k~av~~v~--~~ipi~AsGGIt~eni~~~a~tGvD~IsV 267 (286)
T 1x1o_A 197 LKVEV--EVRSLEELEEALEAGADLILLDN----FPLEALREAVRRVG--GRVPLEASGNMTLERAKAAAEAGVDYVSV 267 (286)
T ss_dssp SCEEE--EESSHHHHHHHHHHTCSEEEEES----CCHHHHHHHHHHHT--TSSCEEEESSCCHHHHHHHHHHTCSEEEC
T ss_pred CEEEE--EeCCHHHHHHHHHcCCCEEEECC----CCHHHHHHHHHHhC--CCCeEEEEcCCCHHHHHHHHHcCCCEEEE
Confidence 35666 44678888888899999999997 44555555554432 23344446778899999999999999886
No 308
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=68.41 E-value=8.7 Score=34.40 Aligned_cols=80 Identities=10% Similarity=0.026 Sum_probs=49.9
Q ss_pred HHHHHHhhhcCCcEEEE-eCCCCC----CCHHHHHHHHHHHH-hCCCCeEEcCCCCCHHHHHHHHhcCCCeEeecCC--C
Q 018508 96 PTLAEISGLAGYDFVVV-DMEHGP----GGISDALACLHALA-ATGTPAILRLPESCPTWAKKALDLGPQGVMFPMI--D 167 (355)
Q Consensus 96 p~~~e~aa~~G~D~vil-DlEh~~----~~~~~a~~~i~a~~-~~g~~~iVRV~~~~~~~i~~aLdaGa~GImvP~V--e 167 (355)
.+.++.+...|+|+|.+ |+.... .+.+ .++.+. ..+.++++-=.-.++..+..+++.|+++|++... +
T Consensus 38 ~~~a~~~~~~G~~~i~v~d~~~~~~~~~~~~~----~i~~i~~~~~ipvi~~Ggi~~~~~~~~~l~~Gad~V~ig~~~l~ 113 (247)
T 3tdn_A 38 RDWVVEVEKRGAGEILLTSIDRDGTKSGYDTE----MIRFVRPLTTLPIIASGGAGKMEHFLEAFLRGADKVSINTAAVE 113 (247)
T ss_dssp HHHHHHHHHTTCSEEEEEETTTTTCSSCCCHH----HHHHHGGGCCSCEEEESCCCSHHHHHHHHHTTCSEECCSHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEecCcccCCCcccHH----HHHHHHHhCCCCEEEeCCCCCHHHHHHHHHcCCCeeehhhHHhh
Confidence 46778888999999764 665432 2333 333332 3455555432223567899999999999998753 5
Q ss_pred CHHHHHHHHHHc
Q 018508 168 SPEAAKEAVSYC 179 (355)
Q Consensus 168 saeea~~vv~a~ 179 (355)
+++-++++.+.+
T Consensus 114 dp~~~~~~~~~~ 125 (247)
T 3tdn_A 114 NPSLITQIAQTF 125 (247)
T ss_dssp CTHHHHHHHHHH
T ss_pred ChHHHHHHHHHh
Confidence 556566665543
No 309
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=68.12 E-value=13 Score=33.95 Aligned_cols=68 Identities=10% Similarity=0.163 Sum_probs=49.3
Q ss_pred CHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHHHhcCCCeEeecCCCCH
Q 018508 95 SPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSP 169 (355)
Q Consensus 95 sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~aLdaGa~GImvP~Vesa 169 (355)
+.+.++.+..+|+|.|.|=..++ .+.+...++++.++....|+++=.-.+++- .+|++|+++|-+-.-
T Consensus 22 t~~~~~~l~~~GaD~IelG~S~g-~t~~~~~~~v~~ir~~~~Pivl~~y~~n~i------~~gvDg~iipdLp~e 89 (234)
T 2f6u_A 22 TDEIIKAVADSGTDAVMISGTQN-VTYEKARTLIEKVSQYGLPIVVEPSDPSNV------VYDVDYLFVPTVLNS 89 (234)
T ss_dssp CHHHHHHHHTTTCSEEEECCCTT-CCHHHHHHHHHHHTTSCCCEEECCSSCCCC------CCCSSEEEEEEETTB
T ss_pred cHHHHHHHHHcCCCEEEECCCCC-CCHHHHHHHHHHhcCCCCCEEEecCCcchh------hcCCCEEEEcccCCC
Confidence 44678889999999999999655 457778888888876555655543332221 789999999987543
No 310
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=67.70 E-value=80 Score=29.47 Aligned_cols=104 Identities=15% Similarity=0.146 Sum_probs=67.6
Q ss_pred CchHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEe---------CCCC-CCCHHHHHHHHHHHH-hCCCCe-E
Q 018508 72 SPESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVD---------MEHG-PGGISDALACLHALA-ATGTPA-I 139 (355)
Q Consensus 72 ~~n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilD---------lEh~-~~~~~~a~~~i~a~~-~~g~~~-i 139 (355)
....||++.++|+++.. .+.-+...+..+..+|+|.|++- .++. +.+.+++....+++. ....++ +
T Consensus 5 t~~~lr~~k~~g~~i~~--~tayDa~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vv 82 (275)
T 1o66_A 5 TVNTLQKMKAAGEKIAM--LTAYESSFAALMDDAGVEMLLVGDSLGMAVQGRKSTLPVSLRDMCYHTECVARGAKNAMIV 82 (275)
T ss_dssp CHHHHHHHHHHTCCEEE--EECCSHHHHHHHHHTTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCSSSEEE
T ss_pred CHHHHHHHHhCCCcEEE--EeCcCHHHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhhCCCCeEE
Confidence 45789999999998544 45678889999999999999862 1222 355777766666553 445444 4
Q ss_pred EcCCCC----CHHH----HHHHHhcCCCeEeecCC-CCHHHHHHHHH
Q 018508 140 LRLPES----CPTW----AKKALDLGPQGVMFPMI-DSPEAAKEAVS 177 (355)
Q Consensus 140 VRV~~~----~~~~----i~~aLdaGa~GImvP~V-esaeea~~vv~ 177 (355)
+=.+-. ++.. +.+++++|+++|-+=-- +-++.++.+++
T Consensus 83 aD~pfgsy~~s~~~a~~na~rl~kaGa~aVklEdg~e~~~~I~al~~ 129 (275)
T 1o66_A 83 SDLPFGAYQQSKEQAFAAAAELMAAGAHMVKLEGGVWMAETTEFLQM 129 (275)
T ss_dssp EECCTTSSSSCHHHHHHHHHHHHHTTCSEEEEECSGGGHHHHHHHHH
T ss_pred EECCCCCccCCHHHHHHHHHHHHHcCCcEEEECCcHHHHHHHHHHHH
Confidence 444542 2433 35788899999987543 33455555554
No 311
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=67.68 E-value=4 Score=38.44 Aligned_cols=73 Identities=19% Similarity=0.244 Sum_probs=51.4
Q ss_pred CeEEcCCCCCHHHHHHHHhcCCCeEeecCCCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEE
Q 018508 137 PAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIM 216 (355)
Q Consensus 137 ~~iVRV~~~~~~~i~~aLdaGa~GImvP~Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi 216 (355)
...|-|. +...++.++++|++.||+... ++++++++++.++-+ ..++
T Consensus 196 ~I~Vev~--t~eea~eal~aGaD~I~LDn~-~~~~~~~~v~~l~~~---------------------------~~~v--- 242 (284)
T 1qpo_A 196 PCEVEVD--SLEQLDAVLPEKPELILLDNF-AVWQTQTAVQRRDSR---------------------------APTV--- 242 (284)
T ss_dssp CEEEEES--SHHHHHHHGGGCCSEEEEETC-CHHHHHHHHHHHHHH---------------------------CTTC---
T ss_pred CEEEEeC--CHHHHHHHHHcCCCEEEECCC-CHHHHHHHHHHhhcc---------------------------CCCe---
Confidence 4455444 367899999999999999995 789999999887521 0011
Q ss_pred EEEccHHH--HHHHHHHhccCCccEEEECh
Q 018508 217 CQVESEEG--VKRAEDIAAVDGVDCVQMGP 244 (355)
Q Consensus 217 ~mIET~~a--v~nieeIaavpgVD~l~iGp 244 (355)
.||-..| .+|+.++++. |||++.+|.
T Consensus 243 -~ieaSGGIt~~~i~~~a~t-GVD~isvG~ 270 (284)
T 1qpo_A 243 -MLESSGGLSLQTAATYAET-GVDYLAVGA 270 (284)
T ss_dssp -EEEEESSCCTTTHHHHHHT-TCSEEECGG
T ss_pred -EEEEECCCCHHHHHHHHhc-CCCEEEECH
Confidence 2333333 3677888864 799999997
No 312
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A
Probab=66.77 E-value=38 Score=31.94 Aligned_cols=98 Identities=17% Similarity=0.118 Sum_probs=54.2
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKA 153 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~a 153 (355)
..+++.|+.-.. .+..-.+..+..+.+....+|.|++|+.=...+--++...++.. ....++++=....+...+.++
T Consensus 19 ~~l~~~L~~~g~--~v~~a~~~~~al~~~~~~~~dlvllD~~mp~~~G~~~~~~lr~~-~~~~pii~lt~~~~~~~~~~a 95 (394)
T 3eq2_A 19 ESLAAYLEDSNF--KVLQALNGLQGLQIFESEQPDLVICDLRMPQIDGLELIRRIRQT-ASETPIIVLSGAGVMSDAVEA 95 (394)
T ss_dssp HHHHHHHHHTTE--EEEECSSHHHHHHHHHHSCCSEEEECCCSSSSCTHHHHHHHHHT-TCCCCEEEC---CHHHHHHHH
T ss_pred HHHHHHHHhCCC--EEEEECCHHHHHHHHhhCCCCEEEEcCCCCCCCHHHHHHHHHhh-CCCCcEEEEEcCCCHHHHHHH
Confidence 346666764332 22222333456677778889999999985433323333333331 223444443333445678899
Q ss_pred HhcCCCeEeecCCCCHHHHHH
Q 018508 154 LDLGPQGVMFPMIDSPEAAKE 174 (355)
Q Consensus 154 LdaGa~GImvP~Vesaeea~~ 174 (355)
++.|+++.+.==++..+++..
T Consensus 96 ~~~ga~~yl~KP~~~~~~l~~ 116 (394)
T 3eq2_A 96 LRLGAADYLIKPLEDLAVLEH 116 (394)
T ss_dssp HHHTCSEECCSSCSCTHHHHH
T ss_pred HhcChhhEEECCCChHHHHHH
Confidence 999998866543445555543
No 313
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=66.60 E-value=2.4 Score=40.10 Aligned_cols=34 Identities=26% Similarity=0.290 Sum_probs=29.9
Q ss_pred CHHHHHHHHhcCCCeEeecCCCCHHHHHHHHHHcC
Q 018508 146 CPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCR 180 (355)
Q Consensus 146 ~~~~i~~aLdaGa~GImvP~Vesaeea~~vv~a~~ 180 (355)
+..+++.++++|++.||+... ++++++++++.++
T Consensus 202 tleea~eA~~aGaD~I~LDn~-~~e~l~~av~~l~ 235 (285)
T 1o4u_A 202 NLEDALRAVEAGADIVMLDNL-SPEEVKDISRRIK 235 (285)
T ss_dssp SHHHHHHHHHTTCSEEEEESC-CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCEEEECCC-CHHHHHHHHHHhh
Confidence 467889999999999999995 7899999998874
No 314
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=66.52 E-value=92 Score=29.73 Aligned_cols=106 Identities=17% Similarity=0.158 Sum_probs=68.8
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHH----HHHhhhcCCcEEEEeCCCCC---CCHHHHHHHHHHH-Hh-CCCCeEEcCCC
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTL----AEISGLAGYDFVVVDMEHGP---GGISDALACLHAL-AA-TGTPAILRLPE 144 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~----~e~aa~~G~D~vilDlEh~~---~~~~~a~~~i~a~-~~-~g~~~iVRV~~ 144 (355)
..+-+.-+.+...++.| |..+.+. ++.+...+...|+ ..-.+. ...+.+..++.++ +. .+.|+.+=...
T Consensus 7 ~~ll~~A~~~~yAV~Af-Nv~n~e~~~Ail~AAee~~sPvIl-q~s~g~~~y~g~~~~~~~v~~aa~~~~~VPValHlDH 84 (323)
T 2isw_A 7 RQMLGEARKHKYGVGAF-NVNNMEQIQGIMKAVVQLKSPVIL-QCSRGALKYSDMIYLKKLCEAALEKHPDIPICIHLDH 84 (323)
T ss_dssp HHHHHHHHHTTCCEEEE-ECCSHHHHHHHHHHHHHTTCCEEE-EEEHHHHHHTTTHHHHHHHHHHHHHCTTSCEEEEEEE
T ss_pred HHHHHHHHHCCceEEEE-eeCCHHHHHHHHHHHHHhCCCEEE-ECChhHHHhCCHHHHHHHHHHHHHhcCCCcEEEECCC
Confidence 33444445677788877 5656554 4555667777544 332221 2334455666554 33 56777776654
Q ss_pred C-CHHHHHHHHhcCCCeEee-----cCCCCHHHHHHHHHHcCC
Q 018508 145 S-CPTWAKKALDLGPQGVMF-----PMIDSPEAAKEAVSYCRF 181 (355)
Q Consensus 145 ~-~~~~i~~aLdaGa~GImv-----P~Vesaeea~~vv~a~~~ 181 (355)
. +...+.+++++|...||+ |.=++.+..+++++.++.
T Consensus 85 g~~~e~i~~ai~~GFtSVMiDgS~~p~eENi~~Tk~vv~~ah~ 127 (323)
T 2isw_A 85 GDTLESVKMAIDLGFSSVMIDASHHPFDENVRITKEVVAYAHA 127 (323)
T ss_dssp ECSHHHHHHHHHTTCSEEEECCTTSCHHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHcCCCeEEecCCCCCHHHHHHHHHHHHHHHHH
Confidence 4 467899999999999997 777788888899998863
No 315
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=66.49 E-value=14 Score=33.73 Aligned_cols=64 Identities=13% Similarity=0.099 Sum_probs=42.4
Q ss_pred CHHHHHHhhhcCC-----cEEEEeCCCCCCCHHHHHHHHHHHH-hC-CCCeEEcCCCCCHHHHHHHHhcCCCeEee
Q 018508 95 SPTLAEISGLAGY-----DFVVVDMEHGPGGISDALACLHALA-AT-GTPAILRLPESCPTWAKKALDLGPQGVMF 163 (355)
Q Consensus 95 sp~~~e~aa~~G~-----D~vilDlEh~~~~~~~a~~~i~a~~-~~-g~~~iVRV~~~~~~~i~~aLdaGa~GImv 163 (355)
+|+.++..+..|. .||.+|. .+.... .++++.+. .. ..+++|=-.=.++++++++++ ||++|++
T Consensus 147 ~~e~~~~~a~~g~~~l~~~~Vyl~~-~G~~~~---~~~i~~i~~~~~~~Pv~vGgGI~s~e~a~~~~~-gAd~VIV 217 (234)
T 2f6u_A 147 DKELAASYALVGEKLFNLPIIYIEY-SGTYGN---PELVAEVKKVLDKARLFYGGGIDSREKAREMLR-YADTIIV 217 (234)
T ss_dssp CHHHHHHHHHHHHHTTCCSEEEEEC-TTSCCC---HHHHHHHHHHCSSSEEEEESCCCSHHHHHHHHH-HSSEEEE
T ss_pred CHHHHHHHHHhhhhhcCCCEEEEeC-CCCcch---HHHHHHHHHhCCCCCEEEEecCCCHHHHHHHHh-CCCEEEE
Confidence 7777777666665 9999998 453221 22333332 23 566666555557889999999 9999986
No 316
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=66.26 E-value=12 Score=35.14 Aligned_cols=65 Identities=26% Similarity=0.289 Sum_probs=47.2
Q ss_pred CHHHHHHHHhcCCCeEeecCCCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEEccHHHH
Q 018508 146 CPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGV 225 (355)
Q Consensus 146 ~~~~i~~aLdaGa~GImvP~Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mIET~~av 225 (355)
+..+++.++++|++.||+..+ ++++.+++++.++.. . .+...--| | +
T Consensus 205 t~eea~eA~~aGaD~I~ld~~-~~~~~k~av~~v~~~------i----------------------pi~AsGGI-t---~ 251 (286)
T 1x1o_A 205 SLEELEEALEAGADLILLDNF-PLEALREAVRRVGGR------V----------------------PLEASGNM-T---L 251 (286)
T ss_dssp SHHHHHHHHHHTCSEEEEESC-CHHHHHHHHHHHTTS------S----------------------CEEEESSC-C---H
T ss_pred CHHHHHHHHHcCCCEEEECCC-CHHHHHHHHHHhCCC------C----------------------eEEEEcCC-C---H
Confidence 467789999999999999997 789999988876410 0 01111112 2 6
Q ss_pred HHHHHHhccCCccEEEECh
Q 018508 226 KRAEDIAAVDGVDCVQMGP 244 (355)
Q Consensus 226 ~nieeIaavpgVD~l~iGp 244 (355)
+|+.++++. |+|+|.+|.
T Consensus 252 eni~~~a~t-GvD~IsVgs 269 (286)
T 1x1o_A 252 ERAKAAAEA-GVDYVSVGA 269 (286)
T ss_dssp HHHHHHHHH-TCSEEECTH
T ss_pred HHHHHHHHc-CCCEEEEcH
Confidence 788888875 899999987
No 317
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=65.61 E-value=87 Score=29.13 Aligned_cols=85 Identities=18% Similarity=0.106 Sum_probs=53.5
Q ss_pred ecCCHHHHHHhhhcCCcEEEEeCC-CC----CCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHHHhcCCCeEeec--
Q 018508 92 LSFSPTLAEISGLAGYDFVVVDME-HG----PGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFP-- 164 (355)
Q Consensus 92 ~~~sp~~~e~aa~~G~D~vilDlE-h~----~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~aLdaGa~GImvP-- 164 (355)
-.++|..++.+...|.++|+-=-+ -+ ..+.+-.+.++. ..+.++++==.=..+.++.++++.|++||++=
T Consensus 142 ~~dd~~~akrl~~~G~~aVmPlg~pIGsG~Gi~~~~lI~~I~e---~~~vPVI~eGGI~TPsDAa~AmeLGAdgVlVgSA 218 (265)
T 1wv2_A 142 TSDDPIIARQLAEIGCIAVMPLAGLIGSGLGICNPYNLRIILE---EAKVPVLVDAGVGTASDAAIAMELGCEAVLMNTA 218 (265)
T ss_dssp ECSCHHHHHHHHHSCCSEEEECSSSTTCCCCCSCHHHHHHHHH---HCSSCBEEESCCCSHHHHHHHHHHTCSEEEESHH
T ss_pred eCCCHHHHHHHHHhCCCEEEeCCccCCCCCCcCCHHHHHHHHh---cCCCCEEEeCCCCCHHHHHHHHHcCCCEEEEChH
Confidence 478899999999999999944122 11 234333322222 34667776222235889999999999999873
Q ss_pred --CCCCHHH-HHHHHHHc
Q 018508 165 --MIDSPEA-AKEAVSYC 179 (355)
Q Consensus 165 --~Vesaee-a~~vv~a~ 179 (355)
+.+++.+ ++++++++
T Consensus 219 I~~a~dP~~ma~af~~Av 236 (265)
T 1wv2_A 219 IAHAKDPVMMAEAMKHAI 236 (265)
T ss_dssp HHTSSSHHHHHHHHHHHH
T ss_pred HhCCCCHHHHHHHHHHHH
Confidence 3444553 34555554
No 318
>2jba_A Phosphate regulon transcriptional regulatory PROT; transcription factor, sensory transduction, phosphate regula transcription regulation; 1.45A {Escherichia coli} PDB: 2jba_B 1b00_A 2iyn_A 2jb9_A 1zes_A
Probab=65.58 E-value=10 Score=28.73 Aligned_cols=99 Identities=11% Similarity=0.040 Sum_probs=56.4
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHH-HHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHh----CCCCeEEcCCCCCHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPT-LAEISGLAGYDFVVVDMEHGPGGISDALACLHALAA----TGTPAILRLPESCPT 148 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~-~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~----~g~~~iVRV~~~~~~ 148 (355)
..+++.|......+. ...+.. ..+.+....+|.|++|++-...+--+ .++.++. ...++++=....+..
T Consensus 16 ~~l~~~l~~~g~~v~---~~~~~~~a~~~~~~~~~dlvi~D~~l~~~~g~~---~~~~l~~~~~~~~~~ii~~s~~~~~~ 89 (127)
T 2jba_A 16 EMVCFVLEQNGFQPV---EAEDYDSAVNQLNEPWPDLILLAWMLPGGSGIQ---FIKHLRRESMTRDIPVVMLTARGEEE 89 (127)
T ss_dssp HHHHHHHHHTTCEEE---EECSHHHHHTTCSSSCCSEEEEESEETTEEHHH---HHHHHHTSTTTTTSCEEEEEETTHHH
T ss_pred HHHHHHHHHCCceEE---EeCCHHHHHHHHhccCCCEEEEecCCCCCCHHH---HHHHHHhCcccCCCCEEEEeCCCCHH
Confidence 356666764333222 234443 44555566799999999765433223 3333332 233444433333455
Q ss_pred HHHHHHhcCCCeEeecCCCCHHHHHHHHHHc
Q 018508 149 WAKKALDLGPQGVMFPMIDSPEAAKEAVSYC 179 (355)
Q Consensus 149 ~i~~aLdaGa~GImvP~Vesaeea~~vv~a~ 179 (355)
...++++.|+++++ +|--+.+++...++.+
T Consensus 90 ~~~~~~~~ga~~~l-~Kp~~~~~l~~~i~~~ 119 (127)
T 2jba_A 90 DRVRGLETGADDCI-TKPFSPKELVARIKAV 119 (127)
T ss_dssp HHHTTCCCSCSEEE-EESCCHHHHHHHHHHH
T ss_pred HHHHHHhcCCCeEE-eCCCCHHHHHHHHHHH
Confidence 67788899998865 3444678887766654
No 319
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=64.69 E-value=66 Score=27.41 Aligned_cols=80 Identities=21% Similarity=0.192 Sum_probs=48.3
Q ss_pred CCcEEEEEEecCC-HHH-HHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCC-CHHH-HHHHHhcCC
Q 018508 83 NETLYGLFLLSFS-PTL-AEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPES-CPTW-AKKALDLGP 158 (355)
Q Consensus 83 G~~~~gl~v~~~s-p~~-~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~-~~~~-i~~aLdaGa 158 (355)
+.+++.-+. ..+ |.. ++.+..+|+|+|.+..+.+. +.....++.++..|..+.|=+... ++.. +..+.+.|+
T Consensus 53 ~~~i~~~l~-~~di~~~~~~~a~~~Gad~v~vh~~~~~---~~~~~~~~~~~~~g~~~gv~~~s~~~p~~~~~~~~~~g~ 128 (207)
T 3ajx_A 53 DKIVFADMK-TMDAGELEADIAFKAGADLVTVLGSADD---STIAGAVKAAQAHNKGVVVDLIGIEDKATRAQEVRALGA 128 (207)
T ss_dssp TSEEEEEEE-ECSCHHHHHHHHHHTTCSEEEEETTSCH---HHHHHHHHHHHHHTCEEEEECTTCSSHHHHHHHHHHTTC
T ss_pred CCeEEEEEE-ecCccHHHHHHHHhCCCCEEEEeccCCh---HHHHHHHHHHHHcCCceEEEEecCCChHHHHHHHHHhCC
Confidence 445553222 235 554 89999999999999887542 344444444544455554544333 3444 556667799
Q ss_pred CeE-eecCC
Q 018508 159 QGV-MFPMI 166 (355)
Q Consensus 159 ~GI-mvP~V 166 (355)
+.| +.|-+
T Consensus 129 d~v~~~~~~ 137 (207)
T 3ajx_A 129 KFVEMHAGL 137 (207)
T ss_dssp SEEEEECCH
T ss_pred CEEEEEecc
Confidence 998 77643
No 320
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=64.67 E-value=22 Score=34.66 Aligned_cols=68 Identities=24% Similarity=0.178 Sum_probs=42.8
Q ss_pred CCHHHHHHhhhcCCcEEEEeCCCC-------CCCHHHHHHHHHHHHhCCCCeEEcCCCC-CHHHHHHHHhcCCCeEeec
Q 018508 94 FSPTLAEISGLAGYDFVVVDMEHG-------PGGISDALACLHALAATGTPAILRLPES-CPTWAKKALDLGPQGVMFP 164 (355)
Q Consensus 94 ~sp~~~e~aa~~G~D~vilDlEh~-------~~~~~~a~~~i~a~~~~g~~~iVRV~~~-~~~~i~~aLdaGa~GImvP 164 (355)
.+++.++.+...|+|+|++.. |+ +...+.+.++.+++. ...++++ -.+. +...+.++|..||++|++=
T Consensus 261 ~~~e~A~~a~~aGad~I~vs~-~ggr~~~~g~~~~~~l~~v~~av~-~~ipVia-~GGI~~g~Dv~kalalGAd~V~iG 336 (392)
T 2nzl_A 261 LRGDDAREAVKHGLNGILVSN-HGARQLDGVPATIDVLPEIVEAVE-GKVEVFL-DGGVRKGTDVLKALALGAKAVFVG 336 (392)
T ss_dssp CCHHHHHHHHHTTCCEEEECC-GGGTSSTTCCCHHHHHHHHHHHHT-TSSEEEE-CSSCCSHHHHHHHHHTTCSEEEEC
T ss_pred CCHHHHHHHHHcCCCEEEeCC-CCCCcCCCCcChHHHHHHHHHHcC-CCCEEEE-ECCCCCHHHHHHHHHhCCCeeEEC
Confidence 579999999999999999953 32 222333333333321 1233332 2333 4667889999999999874
No 321
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=64.62 E-value=65 Score=27.28 Aligned_cols=101 Identities=9% Similarity=0.059 Sum_probs=57.3
Q ss_pred hHHHHHHHcCCc-EEEEEEecCCHHHHHHhhhc-------------CCcEEEEeCCCCCCCHHHHHHHHHHHHh---CCC
Q 018508 74 ESLKYRLQSNET-LYGLFLLSFSPTLAEISGLA-------------GYDFVVVDMEHGPGGISDALACLHALAA---TGT 136 (355)
Q Consensus 74 n~lk~~L~~G~~-~~gl~v~~~sp~~~e~aa~~-------------G~D~vilDlEh~~~~~~~a~~~i~a~~~---~g~ 136 (355)
..+++.|..-.. .+..+ .+..+.++.+... .+|.|++|+.-...+--++...++.... ...
T Consensus 75 ~~l~~~L~~~g~~~v~~a--~~~~eal~~l~~~~~~~~~~~~~~~~~~dlillD~~lp~~~G~el~~~lr~~~~~~~~~~ 152 (206)
T 3mm4_A 75 KVATGKLKKMGVSEVEQC--DSGKEALRLVTEGLTQREEQGSVDKLPFDYIFMDCQMPEMDGYEATREIRKVEKSYGVRT 152 (206)
T ss_dssp HHHHHHHHHTTCSEEEEE--SSHHHHHHHHHHHHHHHHHHTCSSCCSCSEEEEESCCSSSCHHHHHHHHHHHHHTTTCCC
T ss_pred HHHHHHHHHcCCCeeeee--CCHHHHHHHHHhhcccccccccccCCCCCEEEEcCCCCCCCHHHHHHHHHhhhhhcCCCC
Confidence 346666765332 22222 2333455555543 7999999998755454444444544321 234
Q ss_pred CeEEcCCCC-CHHHHHHHHhcCCCeEeecCCCCHHHHHHHHHHc
Q 018508 137 PAILRLPES-CPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYC 179 (355)
Q Consensus 137 ~~iVRV~~~-~~~~i~~aLdaGa~GImvP~Vesaeea~~vv~a~ 179 (355)
++++=.... +...+.++++.|+++++.=-++ ++...++.+
T Consensus 153 piI~ls~~~~~~~~~~~~~~~Ga~~~l~KP~~---~L~~~i~~~ 193 (206)
T 3mm4_A 153 PIIAVSGHDPGSEEARETIQAGMDAFLDKSLN---QLANVIREI 193 (206)
T ss_dssp CEEEEESSCCCHHHHHHHHHHTCSEEEETTCT---THHHHHHHH
T ss_pred cEEEEECCCCcHHHHHHHHhCCCCEEEcCcHH---HHHHHHHHH
Confidence 444433333 5677888999999986643333 666666554
No 322
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=64.61 E-value=22 Score=32.98 Aligned_cols=68 Identities=13% Similarity=-0.094 Sum_probs=49.6
Q ss_pred ecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHh-CCCCeEEcCCCCCHHHHHHHHhcCCCeEee
Q 018508 92 LSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAA-TGTPAILRLPESCPTWAKKALDLGPQGVMF 163 (355)
Q Consensus 92 ~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~-~g~~~iVRV~~~~~~~i~~aLdaGa~GImv 163 (355)
...+++.++.+...|+|+|.+|- .+.+..+.+++.+.. .+..+++=..+.+...+...+++|+++|-+
T Consensus 188 ev~tlee~~~A~~aGaD~I~ld~----~~~~~l~~~v~~l~~~~~~~~i~AsGGI~~~ni~~~~~aGaD~i~v 256 (273)
T 2b7n_A 188 ECESFEEAKNAMNAGADIVMCDN----LSVLETKEIAAYRDAHYPFVLLEASGNISLESINAYAKSGVDAISV 256 (273)
T ss_dssp EESSHHHHHHHHHHTCSEEEEET----CCHHHHHHHHHHHHHHCTTCEEEEESSCCTTTHHHHHTTTCSEEEC
T ss_pred EcCCHHHHHHHHHcCCCEEEECC----CCHHHHHHHHHHhhccCCCcEEEEECCCCHHHHHHHHHcCCcEEEE
Confidence 45667778888889999999996 456777666665542 222345556677788899999999998865
No 323
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=64.44 E-value=29 Score=34.79 Aligned_cols=73 Identities=11% Similarity=-0.074 Sum_probs=44.8
Q ss_pred EEEEecCC-HHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHh--CC-CCeEEcCCCCCHHHHHHHHhcCCCeEee
Q 018508 88 GLFLLSFS-PTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAA--TG-TPAILRLPESCPTWAKKALDLGPQGVMF 163 (355)
Q Consensus 88 gl~v~~~s-p~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~--~g-~~~iVRV~~~~~~~i~~aLdaGa~GImv 163 (355)
+..++..+ .+.++.+...|.+++.+|..|+... ...+.+..+.. .+ .++++. +-.+......+.++|+++|.+
T Consensus 235 ~a~v~~~~~~e~~~~l~e~gv~~l~Vd~~~g~~~--~~~~~i~~lk~~~~~~~~Vi~G-~V~t~~~a~~l~~aGad~I~V 311 (503)
T 1me8_A 235 GAGINTRDFRERVPALVEAGADVLCIDSSDGFSE--WQKITIGWIREKYGDKVKVGAG-NIVDGEGFRYLADAGADFIKI 311 (503)
T ss_dssp EEEECSSSHHHHHHHHHHHTCSEEEECCSCCCSH--HHHHHHHHHHHHHGGGSCEEEE-EECSHHHHHHHHHHTCSEEEE
T ss_pred ccccCchhHHHHHHHHHhhhccceEEecccCccc--chhhHHHHHHHhCCCCceEeec-cccCHHHHHHHHHhCCCeEEe
Confidence 33444333 3456777788999999999987432 23333333322 13 444432 223466788899999999987
No 324
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=64.29 E-value=71 Score=31.46 Aligned_cols=65 Identities=23% Similarity=0.169 Sum_probs=42.5
Q ss_pred HHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHH-hC-CCCeEEcCCC-CCHHHHHHHHhcCCCeEeec
Q 018508 96 PTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALA-AT-GTPAILRLPE-SCPTWAKKALDLGPQGVMFP 164 (355)
Q Consensus 96 p~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~-~~-g~~~iVRV~~-~~~~~i~~aLdaGa~GImvP 164 (355)
.+.++.+...|+|.|+++.-++- .+...+.+..+. .. ..+++ ... .+.....+++++|+++|.+=
T Consensus 235 ~~~a~~l~~~G~d~ivi~~a~g~--~~~~~~~i~~l~~~~p~~pvi--~G~v~t~~~a~~~~~~Gad~I~vg 302 (491)
T 1zfj_A 235 FERAEALFEAGADAIVIDTAHGH--SAGVLRKIAEIRAHFPNRTLI--AGNIATAEGARALYDAGVDVVKVG 302 (491)
T ss_dssp HHHHHHHHHHTCSEEEECCSCTT--CHHHHHHHHHHHHHCSSSCEE--EEEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHcCCCeEEEeeecCc--chhHHHHHHHHHHHCCCCcEe--CCCccCHHHHHHHHHcCCCEEEEC
Confidence 46778888899999999986652 233444454443 23 33333 222 24567888999999999774
No 325
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=63.80 E-value=6.4 Score=37.41 Aligned_cols=99 Identities=22% Similarity=0.357 Sum_probs=53.5
Q ss_pred CcEEEEeCCCCC--CCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHHHhcCCCeEeecCCCCHHHHHHHHHHcCCCCC
Q 018508 107 YDFVVVDMEHGP--GGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPS 184 (355)
Q Consensus 107 ~D~vilDlEh~~--~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~aLdaGa~GImvP~Vesaeea~~vv~a~~~pP~ 184 (355)
+|.++|-=.|-. .+...+....+.. .......|-|.. ...++.++++|+++||+=. -++++++++++.+. +
T Consensus 180 ~d~vlikdNHi~~~G~i~~Av~~~r~~-~p~~~ieVEvdt--lde~~eAl~aGaD~I~LDn-~~~~~l~~av~~i~-~-- 252 (298)
T 3gnn_A 180 YAGILIKENHIAAAGGVGEALDAAFAL-NAEVPVQIEVET--LDQLRTALAHGARSVLLDN-FTLDMMRDAVRVTE-G-- 252 (298)
T ss_dssp ---------------CHHHHHHHHHHH-C--CCCEEEESS--HHHHHHHHHTTCEEEEEES-CCHHHHHHHHHHHT-T--
T ss_pred CcEEEEeHHHHHHcCCHHHHHHHHHHh-CCCCCEEEEeCC--HHHHHHHHHcCCCEEEECC-CCHHHHHHHHHHhC-C--
Confidence 367777666652 2334443333322 113444555544 4578899999999999976 57899999998762 1
Q ss_pred CCCCCcccccccccCCCCccccccCCCceEEEEEEccHH--HHHHHHHHhccCCccEEEECh
Q 018508 185 GVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEE--GVKRAEDIAAVDGVDCVQMGP 244 (355)
Q Consensus 185 G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mIET~~--av~nieeIaavpgVD~l~iGp 244 (355)
++ .||-.. -.+|+.++++. |||+|.+|.
T Consensus 253 ---------------------------~v----~ieaSGGI~~~~i~~~a~t-GVD~isvG~ 282 (298)
T 3gnn_A 253 ---------------------------RA----VLEVSGGVNFDTVRAIAET-GVDRISIGA 282 (298)
T ss_dssp ---------------------------SE----EEEEESSCSTTTHHHHHHT-TCSEEECGG
T ss_pred ---------------------------CC----eEEEEcCCCHHHHHHHHHc-CCCEEEECC
Confidence 11 112111 13577888864 899999998
No 326
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=63.16 E-value=17 Score=33.61 Aligned_cols=96 Identities=14% Similarity=0.088 Sum_probs=62.8
Q ss_pred CcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCC--------CCCHH----HHHHHHHHHHhCCCCeE--EcCC------
Q 018508 84 ETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHG--------PGGIS----DALACLHALAATGTPAI--LRLP------ 143 (355)
Q Consensus 84 ~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~--------~~~~~----~a~~~i~a~~~~g~~~i--VRV~------ 143 (355)
...+..++ .+...++.+..+|+|.|-++.-=+ -.+.+ .+++.++.++..|..+- |..-
T Consensus 72 ~~~v~~l~--~n~~~i~~a~~~G~~~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~ 149 (295)
T 1ydn_A 72 GVRYSVLV--PNMKGYEAAAAAHADEIAVFISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVVECPYD 149 (295)
T ss_dssp SSEEEEEC--SSHHHHHHHHHTTCSEEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSSEETTT
T ss_pred CCEEEEEe--CCHHHHHHHHHCCCCEEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEecCCcC
Confidence 44555554 678889999999999999985222 12233 33445666666776543 1111
Q ss_pred -CCCHHH----HHHHHhcCCCeEeecC---CCCHHHHHHHHHHcCC
Q 018508 144 -ESCPTW----AKKALDLGPQGVMFPM---IDSPEAAKEAVSYCRF 181 (355)
Q Consensus 144 -~~~~~~----i~~aLdaGa~GImvP~---Vesaeea~~vv~a~~~ 181 (355)
..++.. ++++.+.|++.|.++- +-+|+++.++++.++.
T Consensus 150 ~~~~~~~~~~~~~~~~~~G~d~i~l~Dt~G~~~P~~~~~lv~~l~~ 195 (295)
T 1ydn_A 150 GPVTPQAVASVTEQLFSLGCHEVSLGDTIGRGTPDTVAAMLDAVLA 195 (295)
T ss_dssp EECCHHHHHHHHHHHHHHTCSEEEEEETTSCCCHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHhcCCCEEEecCCCCCcCHHHHHHHHHHHHH
Confidence 123443 4567789999999883 3689999999998863
No 327
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=62.91 E-value=1.1e+02 Score=29.35 Aligned_cols=30 Identities=20% Similarity=0.297 Sum_probs=22.4
Q ss_pred hCCCCeEEcCCCCCHHHHHHHHhcCCCeEee
Q 018508 133 ATGTPAILRLPESCPTWAKKALDLGPQGVMF 163 (355)
Q Consensus 133 ~~g~~~iVRV~~~~~~~i~~aLdaGa~GImv 163 (355)
..+.+++|+.- .++..+++++++|+++|.+
T Consensus 223 ~~~~pv~vK~~-~~~e~a~~a~~~Gad~I~v 252 (370)
T 1gox_A 223 ITSLPILVKGV-ITAEDARLAVQHGAAGIIV 252 (370)
T ss_dssp HCCSCEEEECC-CSHHHHHHHHHTTCSEEEE
T ss_pred HhCCCEEEEec-CCHHHHHHHHHcCCCEEEE
Confidence 35677777654 4567788888999998887
No 328
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=62.41 E-value=56 Score=30.23 Aligned_cols=91 Identities=18% Similarity=0.150 Sum_probs=60.6
Q ss_pred chHHHHHHHc-CCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCC-----HHHHHHHHHHHHh-CCCCeEEcCCCC
Q 018508 73 PESLKYRLQS-NETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGG-----ISDALACLHALAA-TGTPAILRLPES 145 (355)
Q Consensus 73 ~n~lk~~L~~-G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~-----~~~a~~~i~a~~~-~g~~~iVRV~~~ 145 (355)
...+++.+++ |-..+-+..|..+++.++.++..+-+||..=---+... .+...++++.++. ...+++|-..=.
T Consensus 139 ~~~~~~~~~~~gl~~I~lvap~t~~eri~~i~~~~~gfiY~vs~~GvTG~~~~~~~~~~~~v~~vr~~~~~Pv~vGfGIs 218 (271)
T 3nav_A 139 SQPFVAAAEKFGIQPIFIAPPTASDETLRAVAQLGKGYTYLLSRAGVTGAETKANMPVHALLERLQQFDAPPALLGFGIS 218 (271)
T ss_dssp CHHHHHHHHHTTCEEEEEECTTCCHHHHHHHHHHCCSCEEECCCC--------CCHHHHHHHHHHHHTTCCCEEECSSCC
T ss_pred HHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHHCCCeEEEEeccCCCCcccCCchhHHHHHHHHHHhcCCCEEEECCCC
Confidence 4567777765 54556666666778888888888888877622222111 1335566666543 467788866555
Q ss_pred CHHHHHHHHhcCCCeEee
Q 018508 146 CPTWAKKALDLGPQGVMF 163 (355)
Q Consensus 146 ~~~~i~~aLdaGa~GImv 163 (355)
++.++++++..||+||+|
T Consensus 219 t~e~~~~~~~~gADgvIV 236 (271)
T 3nav_A 219 EPAQVKQAIEAGAAGAIS 236 (271)
T ss_dssp SHHHHHHHHHTTCSEEEE
T ss_pred CHHHHHHHHHcCCCEEEE
Confidence 788999899999999987
No 329
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=61.93 E-value=51 Score=31.82 Aligned_cols=67 Identities=25% Similarity=0.283 Sum_probs=40.7
Q ss_pred HHHHhhhcCCcEEEEeCCCC--------CC----------CH-HH---HHHHHHHHHh-CC-CCeEEcCCCCC-------
Q 018508 98 LAEISGLAGYDFVVVDMEHG--------PG----------GI-SD---ALACLHALAA-TG-TPAILRLPESC------- 146 (355)
Q Consensus 98 ~~e~aa~~G~D~vilDlEh~--------~~----------~~-~~---a~~~i~a~~~-~g-~~~iVRV~~~~------- 146 (355)
.++.+..+|||.|=|.+-|+ |. +. .. +.+++++++. .| .++.||++..+
T Consensus 171 aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~v~vrls~~~~~~~~~~ 250 (377)
T 2r14_A 171 AAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPERVGIRLTPFLELFGLTD 250 (377)
T ss_dssp HHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCCTTCCC
T ss_pred HHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcCCCcEEEEeccccccCCCCC
Confidence 34555678999999999884 21 11 12 3345565542 23 28899986531
Q ss_pred ---HH----HHHHHHhcCCCeEeec
Q 018508 147 ---PT----WAKKALDLGPQGVMFP 164 (355)
Q Consensus 147 ---~~----~i~~aLdaGa~GImvP 164 (355)
.. .++.+-+.|++.|-+.
T Consensus 251 ~~~~~~~~~la~~le~~Gvd~i~v~ 275 (377)
T 2r14_A 251 DEPEAMAFYLAGELDRRGLAYLHFN 275 (377)
T ss_dssp SCHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 11 2455667899987763
No 330
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=61.74 E-value=90 Score=28.92 Aligned_cols=104 Identities=15% Similarity=0.126 Sum_probs=65.9
Q ss_pred CchHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeC-----CCC-----CCCHHHHHHHHHHHH-hCCCCe-E
Q 018508 72 SPESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDM-----EHG-----PGGISDALACLHALA-ATGTPA-I 139 (355)
Q Consensus 72 ~~n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDl-----Eh~-----~~~~~~a~~~i~a~~-~~g~~~-i 139 (355)
....||++.++|+++.. .+.-+...+..+..+|+|.|++-- -++ +.+.+++....+++. ....++ +
T Consensus 5 t~~~lr~~k~~g~~i~~--~tayD~~sA~l~e~aG~d~ilvGdsl~~~~lG~~dt~~vtldemi~h~~aV~r~~~~~~vv 82 (264)
T 1m3u_A 5 TISLLQKYKQEKKRFAT--ITAYDYSFAKLFADEGLNVMLVGDSLGMTVQGHDSTLPVTVADIAYHTAAVRRGAPNCLLL 82 (264)
T ss_dssp CHHHHHHHHHHTCCEEE--EECCSHHHHHHHHHHTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCTTSEEE
T ss_pred CHHHHHHHHHCCCcEEE--EeCcCHHHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCcCHHHHHHHHHHHHhhCCCCcEE
Confidence 45789999999998644 456788889999999999999830 111 245666666565553 444443 4
Q ss_pred EcCCCC---CHHH----HHHHHhcCCCeEeecCC-CCHHHHHHHHH
Q 018508 140 LRLPES---CPTW----AKKALDLGPQGVMFPMI-DSPEAAKEAVS 177 (355)
Q Consensus 140 VRV~~~---~~~~----i~~aLdaGa~GImvP~V-esaeea~~vv~ 177 (355)
+=.+-. ++.. +.+++++|+++|-+=-- +-++.++.+++
T Consensus 83 aD~pfgsy~~~~~a~~~a~rl~kaGa~aVklEgg~e~~~~I~al~~ 128 (264)
T 1m3u_A 83 ADLPFMAYATPEQAFENAATVMRAGANMVKIEGGEWLVETVQMLTE 128 (264)
T ss_dssp EECCTTSSSSHHHHHHHHHHHHHTTCSEEECCCSGGGHHHHHHHHH
T ss_pred EECCCCCcCCHHHHHHHHHHHHHcCCCEEEECCcHHHHHHHHHHHH
Confidence 444543 3433 35788899999976322 23444444443
No 331
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=61.53 E-value=79 Score=30.26 Aligned_cols=68 Identities=16% Similarity=0.200 Sum_probs=41.7
Q ss_pred HHHHhhhcCCcEEEEeCCCC--------CC-----C-----HH----HHHHHHHHHHh-CC-CCeEEcCCCCC-------
Q 018508 98 LAEISGLAGYDFVVVDMEHG--------PG-----G-----IS----DALACLHALAA-TG-TPAILRLPESC------- 146 (355)
Q Consensus 98 ~~e~aa~~G~D~vilDlEh~--------~~-----~-----~~----~a~~~i~a~~~-~g-~~~iVRV~~~~------- 146 (355)
.++.+..+|||.|=|.+-|+ |. + .+ -+.+++++++. .| .++.||++..+
T Consensus 166 aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~~v~vrls~~~~~~~~~~ 245 (364)
T 1vyr_A 166 AVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSADRIGIRVSPIGTFQNVDN 245 (364)
T ss_dssp HHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGGGEEEEECCSSCBTTBCC
T ss_pred HHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCCcEEEEEccccccccccC
Confidence 34556779999999999874 21 1 11 23445666542 33 37899887642
Q ss_pred ---H-H----HHHHHHhcCCCeEeecC
Q 018508 147 ---P-T----WAKKALDLGPQGVMFPM 165 (355)
Q Consensus 147 ---~-~----~i~~aLdaGa~GImvP~ 165 (355)
. . .++.+-+.|++.|-++-
T Consensus 246 ~~~~~~~~~~~a~~l~~~G~d~i~v~~ 272 (364)
T 1vyr_A 246 GPNEEADALYLIEELAKRGIAYLHMSE 272 (364)
T ss_dssp CTTHHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEEec
Confidence 1 1 14556678999887753
No 332
>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei}
Probab=61.53 E-value=42 Score=31.44 Aligned_cols=147 Identities=16% Similarity=0.180 Sum_probs=96.5
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCC--------C---CCCHHHHHHHHHHHHhCCCCeEEcC
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEH--------G---PGGISDALACLHALAATGTPAILRL 142 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh--------~---~~~~~~a~~~i~a~~~~g~~~iVRV 142 (355)
..||+.+ +..+.+=+ .+.+++++++...-.|.|+|==|. | ....+.+...+..++..|..+-+=|
T Consensus 87 ~~L~~~i---~t~lNlEm-a~t~emi~ial~~kP~~vtLVPEkreE~TTegGlDv~~~~~~L~~~i~~L~~~GIrVSLFI 162 (278)
T 3gk0_A 87 RTLRPRV---KTRMNLEC-AVTPEMLDIACEIRPHDACLVPEKRSELTTEGGLDVVGHFDAVRAACKQLADAGVRVSLFI 162 (278)
T ss_dssp HHHHHHC---SSCEEEEE-CSSHHHHHHHHHHCCSEEEECCCSGGGBCSSSSBCTTTTHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHc---CCCEEeec-CCCHHHHHHHHHcCCCEEEECCCCCCCcCCCcchhhhccHHHHHHHHHHHHHCCCEEEEEe
Confidence 3455554 34444443 358899999999999999986554 3 2346677788888888887543323
Q ss_pred CCCCHHHHHHHHhcCCCeEee---cCCC------CHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCce
Q 018508 143 PESCPTWAKKALDLGPQGVMF---PMID------SPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEEL 213 (355)
Q Consensus 143 ~~~~~~~i~~aLdaGa~GImv---P~Ve------saeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i 213 (355)
++++.+|..+.+.|++.|=+ |..+ ..++++.+.++.+|.- ..|.+
T Consensus 163 -Dpd~~qI~aA~~~GAd~IELhTG~YA~a~~~~~~~~el~rl~~aA~~A~--~lGL~----------------------- 216 (278)
T 3gk0_A 163 -DPDEAQIRAAHETGAPVIELHTGRYADAHDAAEQQREFERIATGVDAGI--ALGLK----------------------- 216 (278)
T ss_dssp -CSCHHHHHHHHHHTCSEEEECCHHHHTCSSHHHHHHHHHHHHHHHHHHH--HTTCE-----------------------
T ss_pred -CCCHHHHHHHHHhCcCEEEEecchhhccCCchhHHHHHHHHHHHHHHHH--HcCCE-----------------------
Confidence 67899999999999998877 3333 2245666666666531 11111
Q ss_pred EEEEEEccHHHHHHHHHHhccCCccEEEEChhhHHhhc--CC
Q 018508 214 LIMCQVESEEGVKRAEDIAAVDGVDCVQMGPLDLSASM--GY 253 (355)
Q Consensus 214 ~vi~mIET~~av~nieeIaavpgVD~l~iGp~DLs~sl--G~ 253 (355)
+.-=.=--+.|+..|+++|++.-|.||-.=.+.++ |+
T Consensus 217 ---VnAGHGL~y~Nv~~ia~ip~i~ElnIGHaiIa~Al~~Gl 255 (278)
T 3gk0_A 217 ---VNAGHGLHYTNVQAIAALPGIAELNIGHAIVAHAVFVGW 255 (278)
T ss_dssp ---EEECTTCCTTTHHHHHTCTTEEEEEECHHHHHHHHHHCH
T ss_pred ---EecCCCCCHHHHHHHHhCCCCeEEecCHHHHHHHHHHhH
Confidence 11111112467888999999999999998776665 54
No 333
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=61.48 E-value=71 Score=29.90 Aligned_cols=105 Identities=16% Similarity=0.203 Sum_probs=69.6
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHH----HHHhhhcCCcEEEEeCCCCC---CCHHHHHHHHHH-HHhCCCCeEEcCCCC
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTL----AEISGLAGYDFVVVDMEHGP---GGISDALACLHA-LAATGTPAILRLPES 145 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~----~e~aa~~G~D~vilDlEh~~---~~~~~a~~~i~a-~~~~g~~~iVRV~~~ 145 (355)
..+-+.-+.+...++.| |..+-+. ++.+...+...| |..-.+. ...+.+..++++ ++.++.|+.+=....
T Consensus 7 ~~ll~~A~~~~yAv~Af-Nv~n~e~~~avl~AAe~~~sPvI-lq~s~~~~~y~g~~~~~~~v~~~a~~~~VPValHlDHg 84 (286)
T 1gvf_A 7 KYLLQDAQANGYAVPAF-NIHNAETIQAILEVCSEMRSPVI-LAGTPGTFKHIALEEIYALCSAYSTTYNMPLALHLDHH 84 (286)
T ss_dssp HHHHHHHHHHTCCEEEE-ECCSHHHHHHHHHHHHHHTCCCE-EEECTTHHHHSCHHHHHHHHHHHHHHTTSCBEEEEEEE
T ss_pred HHHHHHHHHCCCEEEEE-eeCCHHHHHHHHHHHHHhCCCEE-EECChhHHhhcCHHHHHHHHHHHHHhCCCcEEEEcCCC
Confidence 34444445567777777 5555554 355556777754 4443331 234555666654 356778877766544
Q ss_pred -CHHHHHHHHhcCCCeEee-----cCCCCHHHHHHHHHHcC
Q 018508 146 -CPTWAKKALDLGPQGVMF-----PMIDSPEAAKEAVSYCR 180 (355)
Q Consensus 146 -~~~~i~~aLdaGa~GImv-----P~Vesaeea~~vv~a~~ 180 (355)
+...+.+++++|...||+ |.=++.+..+++++.++
T Consensus 85 ~~~e~i~~ai~~GFtSVMiDgS~lp~eeNi~~Tk~vv~~ah 125 (286)
T 1gvf_A 85 ESLDDIRRKVHAGVRSAMIDGSHFPFAENVKLVKSVVDFCH 125 (286)
T ss_dssp CCHHHHHHHHHTTCCEEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCeEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 567899999999999997 77778888889998886
No 334
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=60.43 E-value=20 Score=30.77 Aligned_cols=84 Identities=14% Similarity=0.112 Sum_probs=49.1
Q ss_pred ecCCHHHHHHhhhcCCcEEEEeC-CCC-------CCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHHHhcCCCeEee
Q 018508 92 LSFSPTLAEISGLAGYDFVVVDM-EHG-------PGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMF 163 (355)
Q Consensus 92 ~~~sp~~~e~aa~~G~D~vilDl-Eh~-------~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~aLdaGa~GImv 163 (355)
...++..+..+...|+|+|+++. -.+ +.+.+..+.+.. ....++++ ..+..+..+..+++.|++||++
T Consensus 114 ~~~t~~e~~~~~~~g~d~i~~~~~~~~~~~~~~~~~~~~~l~~l~~---~~~~pvia-~GGI~~~nv~~~~~~Ga~gv~v 189 (215)
T 1xi3_A 114 SVYSLEEALEAEKKGADYLGAGSVFPTKTKEDARVIGLEGLRKIVE---SVKIPVVA-IGGINKDNAREVLKTGVDGIAV 189 (215)
T ss_dssp EESSHHHHHHHHHHTCSEEEEECSSCC----CCCCCHHHHHHHHHH---HCSSCEEE-ESSCCTTTHHHHHTTTCSEEEE
T ss_pred ecCCHHHHHHHHhcCCCEEEEcCCccCCCCCCCCCcCHHHHHHHHH---hCCCCEEE-ECCcCHHHHHHHHHcCCCEEEE
Confidence 34677777777889999999975 111 223333333222 22344433 4556677788889999999875
Q ss_pred cC----CCCH-HHHHHHHHHc
Q 018508 164 PM----IDSP-EAAKEAVSYC 179 (355)
Q Consensus 164 P~----Vesa-eea~~vv~a~ 179 (355)
=- -.++ +.++++++.+
T Consensus 190 gs~i~~~~d~~~~~~~~~~~~ 210 (215)
T 1xi3_A 190 ISAVMGAEDVRKATEELRKIV 210 (215)
T ss_dssp SHHHHTSSSHHHHHHHHHHHH
T ss_pred hHHHhCCCCHHHHHHHHHHHH
Confidence 32 1233 3445555544
No 335
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=60.07 E-value=41 Score=31.46 Aligned_cols=75 Identities=21% Similarity=0.180 Sum_probs=46.4
Q ss_pred HhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeE---------------EcCCCCC---HHHH---HHHHhcCCC
Q 018508 101 ISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAI---------------LRLPESC---PTWA---KKALDLGPQ 159 (355)
Q Consensus 101 ~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~i---------------VRV~~~~---~~~i---~~aLdaGa~ 159 (355)
.+..+|++.|-| |++ ++..+.|+++...|.+++ -||-+.+ ...+ ++..++||+
T Consensus 103 rl~kaGa~aVkl--Edg----~e~~~~I~al~~agIpV~gHiGLtPQs~~~~ggf~v~grt~~a~~~i~rA~a~~eAGA~ 176 (275)
T 1o66_A 103 ELMAAGAHMVKL--EGG----VWMAETTEFLQMRGIPVCAHIGLTPQSVFAFGGYKVQGRGGKAQALLNDAKAHDDAGAA 176 (275)
T ss_dssp HHHHTTCSEEEE--ECS----GGGHHHHHHHHHTTCCEEEEEESCGGGTTC-----------CHHHHHHHHHHHHHTTCS
T ss_pred HHHHcCCcEEEE--CCc----HHHHHHHHHHHHcCCCeEeeeccCceeecccCCeEEEeChHHHHHHHHHHHHHHHcCCc
Confidence 455589998865 444 234455666656676654 1121111 1223 445689999
Q ss_pred eEeecCCCCHHHHHHHHHHcCCC
Q 018508 160 GVMFPMIDSPEAAKEAVSYCRFP 182 (355)
Q Consensus 160 GImvP~Vesaeea~~vv~a~~~p 182 (355)
+|+++.|. .+.++++.+.+.-|
T Consensus 177 ~ivlE~vp-~~~a~~it~~l~iP 198 (275)
T 1o66_A 177 VVLMECVL-AELAKKVTETVSCP 198 (275)
T ss_dssp EEEEESCC-HHHHHHHHHHCSSC
T ss_pred EEEEecCC-HHHHHHHHHhCCCC
Confidence 99999996 58889999888644
No 336
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=60.02 E-value=66 Score=30.71 Aligned_cols=69 Identities=17% Similarity=0.192 Sum_probs=43.4
Q ss_pred HHHHHhhhcCCcEEEEeCCCC--------CC----------CHH-H---HHHHHHHHHh-C--CCCeEEcCCCCC-----
Q 018508 97 TLAEISGLAGYDFVVVDMEHG--------PG----------GIS-D---ALACLHALAA-T--GTPAILRLPESC----- 146 (355)
Q Consensus 97 ~~~e~aa~~G~D~vilDlEh~--------~~----------~~~-~---a~~~i~a~~~-~--g~~~iVRV~~~~----- 146 (355)
..++.+..+|||.|=|..-|+ |. +.+ . +.+++++++. . ..++.||++..+
T Consensus 162 ~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~pV~vRis~~~~~~~G 241 (363)
T 3l5l_A 162 DAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENLPLTARFGVLEYDGRD 241 (363)
T ss_dssp HHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTSCEEEEEEEECSSSCH
T ss_pred HHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCceEEEEecchhcCCCC
Confidence 345667788999999999884 21 122 1 3345666653 2 357899997532
Q ss_pred ---HH----HHHHHHhcCCCeEeecC
Q 018508 147 ---PT----WAKKALDLGPQGVMFPM 165 (355)
Q Consensus 147 ---~~----~i~~aLdaGa~GImvP~ 165 (355)
.. .++.+-++|++.|-+.-
T Consensus 242 ~~~~~~~~~la~~L~~~Gvd~i~vs~ 267 (363)
T 3l5l_A 242 EQTLEESIELARRFKAGGLDLLSVSV 267 (363)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEec
Confidence 11 14556678999877653
No 337
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=59.67 E-value=1e+02 Score=27.89 Aligned_cols=174 Identities=11% Similarity=0.092 Sum_probs=100.1
Q ss_pred CchHHHHHHHcCCcEEEEEEecCCH----HHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHh-CCCCeEEcCC-CC
Q 018508 72 SPESLKYRLQSNETLYGLFLLSFSP----TLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAA-TGTPAILRLP-ES 145 (355)
Q Consensus 72 ~~n~lk~~L~~G~~~~gl~v~~~sp----~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~-~g~~~iVRV~-~~ 145 (355)
..+.+.++|+. .+++-+.. ..++ .+++.+...|+++|=+.+... . +.+.++.+.. .+. .+|-.. -.
T Consensus 23 ~m~~~~~~l~~-~~vv~Vir-~~~~~~a~~~a~al~~gGi~~iEvt~~t~-~----a~e~I~~l~~~~~~-~~iGaGTVl 94 (232)
T 4e38_A 23 MMSTINNQLKA-LKVIPVIA-IDNAEDIIPLGKVLAENGLPAAEITFRSD-A----AVEAIRLLRQAQPE-MLIGAGTIL 94 (232)
T ss_dssp CHHHHHHHHHH-HCEEEEEC-CSSGGGHHHHHHHHHHTTCCEEEEETTST-T----HHHHHHHHHHHCTT-CEEEEECCC
T ss_pred HHHHHHHHHHh-CCEEEEEE-cCCHHHHHHHHHHHHHCCCCEEEEeCCCC-C----HHHHHHHHHHhCCC-CEEeECCcC
Confidence 35678888876 35555543 3333 356677788999999987642 2 3333433321 221 222211 12
Q ss_pred CHHHHHHHHhcCCCeEeecCCCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEEccHHHH
Q 018508 146 CPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGV 225 (355)
Q Consensus 146 ~~~~i~~aLdaGa~GImvP~Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mIET~~av 225 (355)
+..+++.++++||+.|+.|.. +++-++.+.+. .+.+++-+-|+.=+
T Consensus 95 t~~~a~~Ai~AGA~fIvsP~~-~~~vi~~~~~~---------------------------------gi~~ipGv~TptEi 140 (232)
T 4e38_A 95 NGEQALAAKEAGATFVVSPGF-NPNTVRACQEI---------------------------------GIDIVPGVNNPSTV 140 (232)
T ss_dssp SHHHHHHHHHHTCSEEECSSC-CHHHHHHHHHH---------------------------------TCEEECEECSHHHH
T ss_pred CHHHHHHHHHcCCCEEEeCCC-CHHHHHHHHHc---------------------------------CCCEEcCCCCHHHH
Confidence 578899999999999999984 44444332221 23455556687766
Q ss_pred HHHHHHhccCCccEEEEChhhHHhhcCCCCCCC-CHHHHHHHHHHHHHHHhCCCc--eeecccCCchhHHHHHHCCCCEE
Q 018508 226 KRAEDIAAVDGVDCVQMGPLDLSASMGYLWDPG-HRKVREMMRVAEKGVLGGGKA--YLAGFAMPHDAPLEMKSRGYHMV 302 (355)
Q Consensus 226 ~nieeIaavpgVD~l~iGp~DLs~slG~~~~~~-~p~v~~ai~~iv~aa~a~g~~--~~g~~~~d~~~a~~~~~~G~~~v 302 (355)
.++.+ -|.|.|-+=|. +.. .+..+.++.. .. ...+ +.||+ +++.+..|++.|...+
T Consensus 141 ~~A~~----~Gad~vK~FPa----------~~~gG~~~lkal~~---p~--p~ip~~ptGGI--~~~n~~~~l~aGa~~~ 199 (232)
T 4e38_A 141 EAALE----MGLTTLKFFPA----------EASGGISMVKSLVG---PY--GDIRLMPTGGI--TPSNIDNYLAIPQVLA 199 (232)
T ss_dssp HHHHH----TTCCEEEECST----------TTTTHHHHHHHHHT---TC--TTCEEEEBSSC--CTTTHHHHHTSTTBCC
T ss_pred HHHHH----cCCCEEEECcC----------ccccCHHHHHHHHH---Hh--cCCCeeeEcCC--CHHHHHHHHHCCCeEE
Confidence 66543 26777766332 111 2433332211 11 1334 34444 5788999999999887
Q ss_pred EecchH
Q 018508 303 SGAVDV 308 (355)
Q Consensus 303 s~~~D~ 308 (355)
+.|+-.
T Consensus 200 vgGs~l 205 (232)
T 4e38_A 200 CGGTWM 205 (232)
T ss_dssp EEECGG
T ss_pred EECchh
Confidence 777644
No 338
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=59.57 E-value=49 Score=31.07 Aligned_cols=153 Identities=16% Similarity=0.084 Sum_probs=83.3
Q ss_pred cCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCH-----------HHHHHHHhcCCCeEeec-CCC-----
Q 018508 105 AGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCP-----------TWAKKALDLGPQGVMFP-MID----- 167 (355)
Q Consensus 105 ~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~-----------~~i~~aLdaGa~GImvP-~Ve----- 167 (355)
.|+|.|++. +-.++...+. ..+.+.+||++...+ ..+..+++.||++|.+= .+.
T Consensus 84 ~g~dav~~~-------~G~~~~~~~~--~~~~~lil~l~~~t~~~~~~~~~~l~~~ve~Av~~GAdaV~~~i~~Gs~~~~ 154 (295)
T 3glc_A 84 EHADVLMCT-------RGILRSVVPP--ATNRPVVLRASGANSILAELSNEAVALSMDDAVRLNSCAVAAQVYIGSEYEH 154 (295)
T ss_dssp GGCSEEEEC-------HHHHHHHSCG--GGCCCEEEECEECCCTTSCTTCCEECSCHHHHHHTTCSEEEEEECTTSTTHH
T ss_pred cCCCEEEEC-------HhHHhhhccc--cCCccEEEEEcCCCcCCCCCccchhHHHHHHHHHCCCCEEEEEEECCCCcHH
Confidence 468988854 5555544333 236778999976542 13788999999986542 111
Q ss_pred -CHHHHHHHHHHcCCCCCCCCCCcccccccccCCCC--ccccccCCCceEEEEEEccHHHHHHHHHHhccCCccEEEECh
Q 018508 168 -SPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGID--EGYLSNYEEELLIMCQVESEEGVKRAEDIAAVDGVDCVQMGP 244 (355)
Q Consensus 168 -saeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~--~~y~~~~n~~i~vi~mIET~~av~nieeIaavpgVD~l~iGp 244 (355)
..+++.++++.|+. ||.. -+|. .+..+ -.+++.+..+-.|++--|.|+|=...
T Consensus 155 ~~l~~i~~v~~~a~~-----------------~GlpvIie~~--~G~~~-----~~d~e~i~~aariA~elGAD~VKt~~ 210 (295)
T 3glc_A 155 QSIKNIIQLVDAGMK-----------------VGMPTMAVTG--VGKDM-----VRDQRYFSLATRIAAEMGAQIIKTYY 210 (295)
T ss_dssp HHHHHHHHHHHHHHT-----------------TTCCEEEEEC--C---------CCSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHHHHHHH-----------------cCCEEEEECC--CCCcc-----CCCHHHHHHHHHHHHHhCCCEEEeCC
Confidence 33445567777642 1110 0010 00000 02345555566676555888766651
Q ss_pred hhHHhhcCCCCCCCCHHHHHHHHHHHHHHHhCCCceeecccCCc----hhHHHHHHCCCCEEEecchH
Q 018508 245 LDLSASMGYLWDPGHRKVREMMRVAEKGVLGGGKAYLAGFAMPH----DAPLEMKSRGYHMVSGAVDV 308 (355)
Q Consensus 245 ~DLs~slG~~~~~~~p~v~~ai~~iv~aa~a~g~~~~g~~~~d~----~~a~~~~~~G~~~vs~~~D~ 308 (355)
++ +.++++++.|. -.+...||...+. +.++..++.|.+++++|.-+
T Consensus 211 ---------t~--------e~~~~vv~~~~-vPVv~~GG~~~~~~~~l~~v~~ai~aGA~Gv~vGRnI 260 (295)
T 3glc_A 211 ---------VE--------KGFERIVAGCP-VPIVIAGGKKLPEREALEMCWQAIDQGASGVDMGRNI 260 (295)
T ss_dssp ---------CT--------TTHHHHHHTCS-SCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEESHHH
T ss_pred ---------CH--------HHHHHHHHhCC-CcEEEEECCCCCHHHHHHHHHHHHHhCCeEEEeHHHH
Confidence 11 11344544442 2223455554443 34566778999999999644
No 339
>1xfc_A Alanine racemase; alpha-beta barrel, beta-structure for C-terminal domain, INT aldimine form, isomerase; HET: PLP; 1.90A {Mycobacterium tuberculosis}
Probab=59.36 E-value=1.2e+02 Score=28.68 Aligned_cols=91 Identities=16% Similarity=0.021 Sum_probs=55.2
Q ss_pred hHHHHHHHcCCcEEEEEEec-----CCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCC-eEEcCCCCCH
Q 018508 74 ESLKYRLQSNETLYGLFLLS-----FSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTP-AILRLPESCP 147 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~-----~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~-~iVRV~~~~~ 147 (355)
+.+++++. ...+..-+.. +++.+++.+...|++.+- ....+++..+..+ |.. .++=++...+
T Consensus 26 ~~l~~~~~--~~~l~~vvKanaYG~~~~~i~~~l~~~G~~~~~------vas~~Ea~~~~~~----G~~~~Il~~g~~~~ 93 (384)
T 1xfc_A 26 RVLREHAG--HAQLMAVVKADGYGHGATRVAQTALGAGAAELG------VATVDEALALRAD----GITAPVLAWLHPPG 93 (384)
T ss_dssp HHHHHHHT--TSEEEEECHHHHHTTCHHHHHHHHHHTTCCEEE------ESCHHHHHHHHHT----TCCSCEEECCCCTT
T ss_pred HHHHHhCC--CCEEEEEEeeCCcCCChHHHHHHHHHCCCCEEE------EeEHHHHHHHHhc----CCCCCEEEEcCCCH
Confidence 34555553 3444444443 466777877788987543 2455666555432 332 3443444445
Q ss_pred HHHHHHHhcCCCeEeecCCCCHHHHHHHHHHcC
Q 018508 148 TWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCR 180 (355)
Q Consensus 148 ~~i~~aLdaGa~GImvP~Vesaeea~~vv~a~~ 180 (355)
..+..+++.+ | .+.|+|.++++.+.+.++
T Consensus 94 ~~~~~~~~~~---i-~~~vds~~~l~~l~~~a~ 122 (384)
T 1xfc_A 94 IDFGPALLAD---V-QVAVSSLRQLDELLHAVR 122 (384)
T ss_dssp CCCHHHHHTT---C-EEEECSHHHHHHHHHHHH
T ss_pred HHHHHHHHcC---c-EEEECCHHHHHHHHHHHH
Confidence 5677788754 3 488999999999887653
No 340
>3eqz_A Response regulator; structural genomics, unknown function, PSI-2, protein struct initiative; 2.15A {Colwellia psychrerythraea} SCOP: c.23.1.0
Probab=59.08 E-value=36 Score=25.73 Aligned_cols=101 Identities=10% Similarity=-0.050 Sum_probs=56.2
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHh-CCCCeEEcCCCCCH-----
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAA-TGTPAILRLPESCP----- 147 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~-~g~~~iVRV~~~~~----- 147 (355)
..+++.|......+ ....+...+.......+|.|++|+.-...+-- +.++.++. ....++|=+.+...
T Consensus 17 ~~l~~~L~~~~~~v---~~~~~~~~~~~~~~~~~dlvi~D~~l~~~~g~---~~~~~l~~~~~~~~ii~~s~~~~~~~~~ 90 (135)
T 3eqz_A 17 NLLKTIVEPIFGNV---EAFQHPRAFLTLSLNKQDIIILDLMMPDMDGI---EVIRHLAEHKSPASLILISGYDSGVLHS 90 (135)
T ss_dssp HHHHHHHTTTCSCE---EEESCHHHHTTSCCCTTEEEEEECCTTTTHHH---HHHHHHHHTTCCCEEEEEESSCHHHHHH
T ss_pred HHHHHHHHhhccee---eeecCHHHHHHhhccCCCEEEEeCCCCCCCHH---HHHHHHHhCCCCCCEEEEEeccchhHHH
Confidence 45666665442222 23445554443333339999999986543322 33333332 23334443444443
Q ss_pred -HHHHHHHhcCCCeEeecCCCCHHHHHHHHHHcCC
Q 018508 148 -TWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRF 181 (355)
Q Consensus 148 -~~i~~aLdaGa~GImvP~Vesaeea~~vv~a~~~ 181 (355)
..+.+++..|+++++ +|=-+.+++...++.+..
T Consensus 91 ~~~~~~~~~~g~~~~l-~KP~~~~~l~~~l~~~~~ 124 (135)
T 3eqz_A 91 AETLALSCGLNVINTF-TKPINTEVLTCFLTSLSN 124 (135)
T ss_dssp HHHHHHHTTCEEEEEE-ESSCCHHHHHHHHHHHSC
T ss_pred HHHHHHHcCCCcceee-CCCCCHHHHHHHHHHHHh
Confidence 445667888887764 455578999888887753
No 341
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=59.07 E-value=43 Score=31.12 Aligned_cols=91 Identities=19% Similarity=0.147 Sum_probs=56.2
Q ss_pred cEEEEEEecC---CHHH-H---HHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeE---------------EcC
Q 018508 85 TLYGLFLLSF---SPTL-A---EISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAI---------------LRL 142 (355)
Q Consensus 85 ~~~gl~v~~~---sp~~-~---e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~i---------------VRV 142 (355)
+.+-.=+|.. +|+. + ..+..+|++.|- +|++. +..+.|+++...|.+++ -|+
T Consensus 79 ~~vvaD~pfgsy~~~~~a~~~a~rl~kaGa~aVk--lEgg~----e~~~~I~al~~agipV~gHiGLtPq~v~~~ggf~v 152 (264)
T 1m3u_A 79 CLLLADLPFMAYATPEQAFENAATVMRAGANMVK--IEGGE----WLVETVQMLTERAVPVCGHLGLTPQSVNIFGGYKV 152 (264)
T ss_dssp SEEEEECCTTSSSSHHHHHHHHHHHHHTTCSEEE--CCCSG----GGHHHHHHHHHTTCCEEEEEESCGGGHHHHTSSCC
T ss_pred CcEEEECCCCCcCCHHHHHHHHHHHHHcCCCEEE--ECCcH----HHHHHHHHHHHCCCCeEeeecCCceeecccCCeEE
Confidence 4444445554 5542 2 245558998775 56662 34455666656676655 233
Q ss_pred CCCCHH----H---HHHHHhcCCCeEeecCCCCHHHHHHHHHHcCCC
Q 018508 143 PESCPT----W---AKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFP 182 (355)
Q Consensus 143 ~~~~~~----~---i~~aLdaGa~GImvP~Vesaeea~~vv~a~~~p 182 (355)
-+.+.. . .++..++||++|+++.+. .+.++++.+.+.-|
T Consensus 153 ~grt~~~a~~~i~rA~a~~eAGA~~ivlE~vp-~~~a~~it~~l~iP 198 (264)
T 1m3u_A 153 QGRGDEAGDQLLSDALALEAAGAQLLVLECVP-VELAKRITEALAIP 198 (264)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHTCCEEEEESCC-HHHHHHHHHHCSSC
T ss_pred EeCCHHHHHHHHHHHHHHHHCCCcEEEEecCC-HHHHHHHHHhCCCC
Confidence 333322 1 345567999999999996 58889999888644
No 342
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=59.05 E-value=1.2e+02 Score=28.64 Aligned_cols=118 Identities=14% Similarity=0.056 Sum_probs=64.4
Q ss_pred HHHHHHHhcCCCeEeecCCCC-HHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEEccHHHHH
Q 018508 148 TWAKKALDLGPQGVMFPMIDS-PEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVK 226 (355)
Q Consensus 148 ~~i~~aLdaGa~GImvP~Ves-aeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mIET~~av~ 226 (355)
..+..+++.|++.|.+++-.. .+.++++.+. .+.+++.+-|++-+.
T Consensus 113 ~~~~~~~~~g~~~V~~~~g~~~~~~i~~~~~~---------------------------------g~~v~~~v~t~~~a~ 159 (369)
T 3bw2_A 113 AKLAVLLDDPVPVVSFHFGVPDREVIARLRRA---------------------------------GTLTLVTATTPEEAR 159 (369)
T ss_dssp HHHHHHHHSCCSEEEEESSCCCHHHHHHHHHT---------------------------------TCEEEEEESSHHHHH
T ss_pred HHHHHHHhcCCCEEEEeCCCCcHHHHHHHHHC---------------------------------CCeEEEECCCHHHHH
Confidence 356777788888888876442 3444443220 135667777776433
Q ss_pred HHHHHhccCCccEEEE-ChhhHHhhcCCCCCCCC------HHHHHHHHHHHHHHHhCCCce--eecccCCchhHHHHHHC
Q 018508 227 RAEDIAAVDGVDCVQM-GPLDLSASMGYLWDPGH------RKVREMMRVAEKGVLGGGKAY--LAGFAMPHDAPLEMKSR 297 (355)
Q Consensus 227 nieeIaavpgVD~l~i-Gp~DLs~slG~~~~~~~------p~v~~ai~~iv~aa~a~g~~~--~g~~~~d~~~a~~~~~~ 297 (355)
.+++ .|+|+|.+ |+. .....|.. .+.. ......+.++... ..+++ .|++ .+++.+..+++.
T Consensus 160 ~a~~----~GaD~i~v~g~~-~GGh~g~~-~~~~~~~~~~~~~~~~l~~i~~~---~~iPViaaGGI-~~~~~~~~~l~~ 229 (369)
T 3bw2_A 160 AVEA----AGADAVIAQGVE-AGGHQGTH-RDSSEDDGAGIGLLSLLAQVREA---VDIPVVAAGGI-MRGGQIAAVLAA 229 (369)
T ss_dssp HHHH----TTCSEEEEECTT-CSEECCCS-SCCGGGTTCCCCHHHHHHHHHHH---CSSCEEEESSC-CSHHHHHHHHHT
T ss_pred HHHH----cCCCEEEEeCCC-cCCcCCCc-ccccccccccccHHHHHHHHHHh---cCceEEEECCC-CCHHHHHHHHHc
Confidence 3322 47999999 763 10011111 0000 0123334444332 24443 3333 367888888999
Q ss_pred CCCEEEecchH
Q 018508 298 GYHMVSGAVDV 308 (355)
Q Consensus 298 G~~~vs~~~D~ 308 (355)
|.+++.+++-.
T Consensus 230 GAd~V~vGs~~ 240 (369)
T 3bw2_A 230 GADAAQLGTAF 240 (369)
T ss_dssp TCSEEEESHHH
T ss_pred CCCEEEEChHH
Confidence 99999998543
No 343
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=59.03 E-value=63 Score=29.80 Aligned_cols=91 Identities=11% Similarity=0.083 Sum_probs=59.9
Q ss_pred chHHHHHHHc-CCcEEEEEEecCCHHHHHHhhhcCCcEEEE-eCCCCC-CC---HHHHHHHHHHHHh-CCCCeEEcCCCC
Q 018508 73 PESLKYRLQS-NETLYGLFLLSFSPTLAEISGLAGYDFVVV-DMEHGP-GG---ISDALACLHALAA-TGTPAILRLPES 145 (355)
Q Consensus 73 ~n~lk~~L~~-G~~~~gl~v~~~sp~~~e~aa~~G~D~vil-DlEh~~-~~---~~~a~~~i~a~~~-~g~~~iVRV~~~ 145 (355)
...+++.+++ |-..+-+..|..+++.++.++..+-+||.+ ..-... .. .+...+.++.++. ...+++|--.-.
T Consensus 137 ~~~~~~~~~~~gl~~i~liaP~t~~eri~~i~~~~~gfvY~vS~~GvTG~~~~~~~~~~~~v~~vr~~~~~pv~vGfGI~ 216 (267)
T 3vnd_A 137 SAPFSKAAKAHGIAPIFIAPPNADADTLKMVSEQGEGYTYLLSRAGVTGTESKAGEPIENILTQLAEFNAPPPLLGFGIA 216 (267)
T ss_dssp CHHHHHHHHHTTCEEECEECTTCCHHHHHHHHHHCCSCEEESCCCCCC--------CHHHHHHHHHTTTCCCEEECSSCC
T ss_pred HHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHhCCCcEEEEecCCCCCCccCCcHHHHHHHHHHHHhcCCCEEEECCcC
Confidence 4677887765 444555555667778888888877778776 333211 11 1224556666554 456777766555
Q ss_pred CHHHHHHHHhcCCCeEee
Q 018508 146 CPTWAKKALDLGPQGVMF 163 (355)
Q Consensus 146 ~~~~i~~aLdaGa~GImv 163 (355)
++.++++++..||+||++
T Consensus 217 ~~e~~~~~~~~gADgvVV 234 (267)
T 3vnd_A 217 EPEQVRAAIKAGAAGAIS 234 (267)
T ss_dssp SHHHHHHHHHTTCSEEEE
T ss_pred CHHHHHHHHHcCCCEEEE
Confidence 688999899999999987
No 344
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=58.84 E-value=40 Score=31.75 Aligned_cols=76 Identities=24% Similarity=0.194 Sum_probs=50.2
Q ss_pred EEEEecCCHHHHHHhhhcCCcEEEEeCC---------CCCCCHHHHHHHH----HHHHhCC--CCeEEcC-CCCCHHHHH
Q 018508 88 GLFLLSFSPTLAEISGLAGYDFVVVDME---------HGPGGISDALACL----HALAATG--TPAILRL-PESCPTWAK 151 (355)
Q Consensus 88 gl~v~~~sp~~~e~aa~~G~D~vilDlE---------h~~~~~~~a~~~i----~a~~~~g--~~~iVRV-~~~~~~~i~ 151 (355)
-+.+-..+++.++.++.+|+|.|++.+- ..+.+++++.+.+ .+++.-. ..++.-= +=..+..++
T Consensus 165 ~Ti~~v~~~eeA~amA~agpDiI~~h~glT~gglIG~~~avs~~~~~e~i~~i~~a~~~vnpdvivLc~gGpIstpeDv~ 244 (286)
T 2p10_A 165 LTTPYVFSPEDAVAMAKAGADILVCHMGLTTGGAIGARSGKSMDDCVSLINECIEAARTIRDDIIILSHGGPIANPEDAR 244 (286)
T ss_dssp EECCEECSHHHHHHHHHHTCSEEEEECSCC---------CCCHHHHHHHHHHHHHHHHHHCSCCEEEEESTTCCSHHHHH
T ss_pred eEEEecCCHHHHHHHHHcCCCEEEECCCCCCCCcccCCCcccHHHhHHHHHHHHHHHHHhCCCcEEEecCCCCCCHHHHH
Confidence 3344568999999999999999999998 2234666654444 3343322 2333333 224578899
Q ss_pred HHHhc--CCCeEee
Q 018508 152 KALDL--GPQGVMF 163 (355)
Q Consensus 152 ~aLda--Ga~GImv 163 (355)
.+++. |++|++.
T Consensus 245 ~~l~~t~G~~G~~g 258 (286)
T 2p10_A 245 FILDSCQGCHGFYG 258 (286)
T ss_dssp HHHHHCTTCCEEEE
T ss_pred HHHhcCCCccEEEe
Confidence 99998 8998775
No 345
>2nr5_A Hypothetical protein SO2669; PSI-2, MCSG, MAD, structural G protein structure initiative, midwest center for structural genomics; 1.90A {Shewanella oneidensis} SCOP: a.25.6.1
Probab=58.13 E-value=2 Score=30.75 Aligned_cols=39 Identities=23% Similarity=0.515 Sum_probs=24.1
Q ss_pred HHHHHHHHhcCCCC--CCCCCCchhHHhhhhccccccccCC
Q 018508 317 EDVARFKMNLTDDA--DDDDDDDDDAWRERIKDADDKYWSE 355 (355)
Q Consensus 317 ~~~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (355)
..++++|..-+.+. |+.|-.|-.-|..|||.-.+-.|-|
T Consensus 23 gklkairqlcgaedssdssdmqeveiwtnrikeledwlwge 63 (67)
T 2nr5_A 23 GKLKAIRQLCGAEDSSDSSDMQEVEIWTNRIKELEDWLWGE 63 (67)
T ss_dssp HHHHHHHHTTTTTCC----HHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCccCCcchhhHHHHHHHHHHHHHHHHhhcC
Confidence 45677777654433 2222234568999999977777754
No 346
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=58.02 E-value=23 Score=33.85 Aligned_cols=70 Identities=21% Similarity=0.254 Sum_probs=49.3
Q ss_pred CeEEcCCCCCHHHHHHHHhcCCCeEeecCCCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEE
Q 018508 137 PAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIM 216 (355)
Q Consensus 137 ~~iVRV~~~~~~~i~~aLdaGa~GImvP~Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi 216 (355)
.+.|=|.. ...+..++++|+++||+=. -++++++++++.++- ++.
T Consensus 233 kIeVEVdt--ldea~eAl~aGaD~I~LDn-~~~~~l~~av~~l~~------------------------------~v~-- 277 (320)
T 3paj_A 233 PVEVETET--LAELEEAISAGADIIMLDN-FSLEMMREAVKINAG------------------------------RAA-- 277 (320)
T ss_dssp CEEEEESS--HHHHHHHHHTTCSEEEEES-CCHHHHHHHHHHHTT------------------------------SSE--
T ss_pred eEEEEECC--HHHHHHHHHcCCCEEEECC-CCHHHHHHHHHHhCC------------------------------CCe--
Confidence 34444433 4678889999999999977 478999999988751 011
Q ss_pred EEEccHHH--HHHHHHHhccCCccEEEECh
Q 018508 217 CQVESEEG--VKRAEDIAAVDGVDCVQMGP 244 (355)
Q Consensus 217 ~mIET~~a--v~nieeIaavpgVD~l~iGp 244 (355)
||-..| .+|+.++++. |||++.+|.
T Consensus 278 --ieaSGGIt~~~I~~~a~t-GVD~isvGa 304 (320)
T 3paj_A 278 --LENSGNITLDNLKECAET-GVDYISVGA 304 (320)
T ss_dssp --EEEESSCCHHHHHHHHTT-TCSEEECTH
T ss_pred --EEEECCCCHHHHHHHHHc-CCCEEEECc
Confidence 111111 6788888874 899999998
No 347
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=57.91 E-value=1.3e+02 Score=28.97 Aligned_cols=69 Identities=19% Similarity=0.146 Sum_probs=42.3
Q ss_pred HHHHHhhhcCCcEEEEeCCCC--------CC----------CHH-H---HHHHHHHHHh-CC-CCeEEcCCCCC------
Q 018508 97 TLAEISGLAGYDFVVVDMEHG--------PG----------GIS-D---ALACLHALAA-TG-TPAILRLPESC------ 146 (355)
Q Consensus 97 ~~~e~aa~~G~D~vilDlEh~--------~~----------~~~-~---a~~~i~a~~~-~g-~~~iVRV~~~~------ 146 (355)
..++.+..+|||.|=|..-|+ |. +.+ . +.+++++++. .| .++.||++..+
T Consensus 157 ~AA~~a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGGslenR~rf~~eiv~aVr~~vg~~~v~vRls~~~~~~g~~ 236 (362)
T 4ab4_A 157 SGAENAKAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGGSLENRARLLLEVTDAAIEVWGAQRVGVHLAPRADAHDMG 236 (362)
T ss_dssp HHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCSSSCC
T ss_pred HHHHHHHHcCCCEEEECCcCccHHHhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHhcCCCceEEEeeccccccccC
Confidence 345667789999999999994 21 111 1 2345555542 22 27899998652
Q ss_pred ---H-H---H-HHHHHhcCCCeEeecC
Q 018508 147 ---P-T---W-AKKALDLGPQGVMFPM 165 (355)
Q Consensus 147 ---~-~---~-i~~aLdaGa~GImvP~ 165 (355)
+ . . ++.+-++|++.|-+.-
T Consensus 237 ~~~~~~~~~~la~~l~~~Gvd~i~v~~ 263 (362)
T 4ab4_A 237 DADRAETFTYVARELGKRGIAFICSRE 263 (362)
T ss_dssp CTTHHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCCcHHHHHHHHHHHHHhCCCEEEECC
Confidence 1 1 1 3445568998877643
No 348
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0
Probab=57.82 E-value=20 Score=29.43 Aligned_cols=54 Identities=11% Similarity=0.060 Sum_probs=39.8
Q ss_pred cHHHHHHHHHHhc--cCCccEEEEChhhHHhhcCCCCCCCCHHHHHHHHHHHHHHHhCCCce
Q 018508 221 SEEGVKRAEDIAA--VDGVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVAEKGVLGGGKAY 280 (355)
Q Consensus 221 T~~av~nieeIaa--vpgVD~l~iGp~DLs~slG~~~~~~~p~v~~ai~~iv~aa~a~g~~~ 280 (355)
+...+..++.... -|.+-.|++|.||+... ..-.++...++++++.+++++.++
T Consensus 51 ~~~~~~~~~~~~~~~~pd~vvi~~G~ND~~~~------~~~~~~~~~~~~~i~~~~~~~~~v 106 (185)
T 3hp4_A 51 SGGALRRLDALLEQYEPTHVLIELGANDGLRG------FPVKKMQTNLTALVKKSQAANAMT 106 (185)
T ss_dssp HHHHHHHHHHHHHHHCCSEEEEECCHHHHHTT------CCHHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHhhcCCCEEEEEeecccCCCC------cCHHHHHHHHHHHHHHHHHcCCeE
Confidence 3556777777764 57778888999999642 123567888999999999987653
No 349
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=57.70 E-value=62 Score=31.94 Aligned_cols=134 Identities=16% Similarity=0.068 Sum_probs=77.9
Q ss_pred HHHHHHhcCCCeEeecCCCCHHHHHHH---HHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEE--ccHH
Q 018508 149 WAKKALDLGPQGVMFPMIDSPEAAKEA---VSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQV--ESEE 223 (355)
Q Consensus 149 ~i~~aLdaGa~GImvP~Vesaeea~~v---v~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mI--ET~~ 223 (355)
+|.++.++|++-|-+. |.+.++++.+ .+.+.. . +-++.+++=| .-..
T Consensus 43 QI~~L~~aG~eiVRva-Vp~~~~A~al~~I~~~l~~-----~----------------------~~~vPLVADiHF~~~~ 94 (406)
T 4g9p_A 43 QVLELHRAGSEIVRLT-VNDEEAAKAVPEIKRRLLA-----E----------------------GVEVPLVGDFHFNGHL 94 (406)
T ss_dssp HHHHHHHHTCSEEEEE-CCSHHHHHHHHHHHHHHHH-----T----------------------TCCCCEEEECCSSHHH
T ss_pred HHHHHHHcCCCEEEEe-cCCHHHHHhHHHHHHHHHh-----c----------------------CCCCceEeeecccHHH
Confidence 5777888898865554 4455555444 433221 0 1123455544 4466
Q ss_pred HHHHHHHHhccCCccEEEEChhhHHhhcCCCCCCCCHHHHHHHHHHHHHHHhCCCce-eecccCCc--------------
Q 018508 224 GVKRAEDIAAVDGVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVAEKGVLGGGKAY-LAGFAMPH-------------- 288 (355)
Q Consensus 224 av~nieeIaavpgVD~l~iGp~DLs~slG~~~~~~~p~v~~ai~~iv~aa~a~g~~~-~g~~~~d~-------------- 288 (355)
++..+++.++ ++|.+=|-|+-+ | . .....+.+..++++|+++++++ +|.-++..
T Consensus 95 al~a~~~~a~--~~dkiRINPGNi----g---~--~~k~~e~~~~vv~~ak~~~~pIRIGVN~GSL~~~ll~k~~d~~~~ 163 (406)
T 4g9p_A 95 LLRKYPKMAE--ALDKFRINPGTL----G---R--GRHKDEHFAEMIRIAMDLGKPVRIGANWGSLDPALLTELMDRNAS 163 (406)
T ss_dssp HHHHCHHHHH--HCSEEEECTTSS----C---S--THHHHHHHHHHHHHHHHHTCCEEEEEEGGGCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHh--HHhhcccCcccc----C---c--cccHHHHHHHHHHHHHHccCCceeccccccccHHHHHHhhccccc
Confidence 7777777776 688888877632 1 1 1223455677889999999874 33222211
Q ss_pred --------------------hhHHHHHHCCCCE----EEe-cchHHHHHHHHHHHHHH
Q 018508 289 --------------------DAPLEMKSRGYHM----VSG-AVDVGLFRSAAVEDVAR 321 (355)
Q Consensus 289 --------------------~~a~~~~~~G~~~----vs~-~~D~~ll~~~~~~~~~~ 321 (355)
+.++.+.++||.+ +|+ ++|+..+-++++...+.
T Consensus 164 ~~~p~~~~~v~~eamVeSAl~~~~~~~~~~f~~~~iviS~KaSdv~~~i~aYr~la~~ 221 (406)
T 4g9p_A 164 RPEPKSAHEVVLEALVESAVRAYEAALEMGLGEDKLVLSAKVSKARDLVWVYRELARR 221 (406)
T ss_dssp SSSCCCHHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEECSSHHHHHHHHHHHHHH
T ss_pred CCCccchhhhHHHHHHHHHHHHHHHHHHcCCChhheEEEeecCCHHHHHHHHHHHHHh
Confidence 1123344567643 555 78999999988776543
No 350
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=57.25 E-value=63 Score=24.78 Aligned_cols=101 Identities=12% Similarity=-0.004 Sum_probs=56.9
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKA 153 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~a 153 (355)
..++..|..+ .. +..-.+..+..+.+....+|.|++|+.-...+--++...++.. ....++++=....+...+..+
T Consensus 15 ~~l~~~l~~~-~~--v~~~~~~~~a~~~~~~~~~dlvl~D~~lp~~~g~~~~~~l~~~-~~~~~ii~~s~~~~~~~~~~~ 90 (139)
T 2jk1_A 15 AAMKLALEDD-FD--VLTAQGAEAAIAILEEEWVQVIICDQRMPGRTGVDFLTEVRER-WPETVRIIITGYTDSASMMAA 90 (139)
T ss_dssp HHHHHHHTTT-SC--EEEESSHHHHHHHHHHSCEEEEEEESCCSSSCHHHHHHHHHHH-CTTSEEEEEESCTTCHHHHHH
T ss_pred HHHHHHhhcC-ce--EEEcCCHHHHHHHHhcCCCCEEEEeCCCCCCcHHHHHHHHHHh-CCCCcEEEEeCCCChHHHHHH
Confidence 3466677654 32 2222233445566667789999999986544433333334332 223344443333444566667
Q ss_pred Hhc-CCCeEeecCCCCHHHHHHHHHHc
Q 018508 154 LDL-GPQGVMFPMIDSPEAAKEAVSYC 179 (355)
Q Consensus 154 Lda-Ga~GImvP~Vesaeea~~vv~a~ 179 (355)
+.. |+++.+ +|--+.+++...++.+
T Consensus 91 ~~~~ga~~~l-~KP~~~~~L~~~i~~~ 116 (139)
T 2jk1_A 91 INDAGIHQFL-TKPWHPEQLLSSARNA 116 (139)
T ss_dssp HHHTTCCEEE-ESSCCHHHHHHHHHHH
T ss_pred HHhhchhhhc-cCCCCHHHHHHHHHHH
Confidence 765 587754 4445678887776654
No 351
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=57.10 E-value=48 Score=31.14 Aligned_cols=66 Identities=9% Similarity=-0.001 Sum_probs=49.0
Q ss_pred ecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHHHhcCCCeEee
Q 018508 92 LSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMF 163 (355)
Q Consensus 92 ~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~aLdaGa~GImv 163 (355)
-..+.+.++.+...|+|+|.+|- .+.++++.+++.+ .+..+++=..+.+...+....+.|+++|-+
T Consensus 214 ev~tlee~~eA~~aGaD~I~ld~----~~~e~l~~~v~~~--~~~~~I~ASGGIt~~~i~~~a~~GvD~isv 279 (296)
T 1qap_A 214 EVENLDELDDALKAGADIIMLDN----FNTDQMREAVKRV--NGQARLEVSGNVTAETLREFAETGVDFISV 279 (296)
T ss_dssp EESSHHHHHHHHHTTCSEEEESS----CCHHHHHHHHHTT--CTTCCEEECCCSCHHHHHHHHHTTCSEEEC
T ss_pred EeCCHHHHHHHHHcCCCEEEECC----CCHHHHHHHHHHh--CCCCeEEEECCCCHHHHHHHHHcCCCEEEE
Confidence 45566777778889999999985 6677777766543 223344446677889999999999998876
No 352
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=57.08 E-value=41 Score=31.59 Aligned_cols=111 Identities=19% Similarity=0.164 Sum_probs=60.5
Q ss_pred CCCCCCCCchHHHHHHHcC--CcEEEEEEecC----CHHH-----HHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHh
Q 018508 65 LSPSPSPSPESLKYRLQSN--ETLYGLFLLSF----SPTL-----AEISGLAGYDFVVVDMEHGPGGISDALACLHALAA 133 (355)
Q Consensus 65 ~~~~~~~~~n~lk~~L~~G--~~~~gl~v~~~----sp~~-----~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~ 133 (355)
-.+.+....-..-+++..| .+.+-.=++.. +++. .+.+.++|++.|-| |++. +..+.|+++..
T Consensus 74 t~~vTldemi~h~~aV~r~~~~~~vvaD~pfgsy~~s~~~a~~na~rl~~eaGa~aVkl--Edg~----e~~~~I~al~~ 147 (281)
T 1oy0_A 74 TVPISIDELIPLVRGVVRGAPHALVVADLPFGSYEAGPTAALAAATRFLKDGGAHAVKL--EGGE----RVAEQIACLTA 147 (281)
T ss_dssp SSSCCGGGTHHHHHHHHHHCTTSEEEEECCTTSSTTCHHHHHHHHHHHHHTTCCSEEEE--EBSG----GGHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHhcCCCCeEEEECCCCcccCCHHHHHHHHHHHHHHhCCeEEEE--CCcH----HHHHHHHHHHH
Confidence 3344444443333444433 35555444542 5653 34455689998865 4442 33444555544
Q ss_pred CCCCeE---------E------cCCCCCH---HHH---HHHHhcCCCeEeecCCCCHHHHHHHHHHcCCC
Q 018508 134 TGTPAI---------L------RLPESCP---TWA---KKALDLGPQGVMFPMIDSPEAAKEAVSYCRFP 182 (355)
Q Consensus 134 ~g~~~i---------V------RV~~~~~---~~i---~~aLdaGa~GImvP~Vesaeea~~vv~a~~~p 182 (355)
.|.+++ | ||-+.+. ..+ ++..++||++|+++.|. .+.++++.+.+.-|
T Consensus 148 agIpV~gHiGLtPqsv~~~ggf~v~grt~~a~~~i~rA~a~~eAGA~~ivlE~vp-~~~a~~it~~l~iP 216 (281)
T 1oy0_A 148 AGIPVMAHIGFTPQSVNTLGGFRVQGRGDAAEQTIADAIAVAEAGAFAVVMEMVP-AELATQITGKLTIP 216 (281)
T ss_dssp HTCCEEEEEECCC--------------CHHHHHHHHHHHHHHHHTCSEEEEESCC-HHHHHHHHHHCSSC
T ss_pred CCCCEEeeecCCcceecccCCeEEEeCcHHHHHHHHHHHHHHHcCCcEEEEecCC-HHHHHHHHHhCCCC
Confidence 566554 1 2222221 122 44567999999999996 58888998888644
No 353
>1bd0_A Alanine racemase; isomerase, pyridoxal phosphate, alanine phosphonate; HET: IN5; 1.60A {Geobacillus stearothermophilus} SCOP: b.49.2.2 c.1.6.1 PDB: 1sft_A* 2sfp_A* 1l6g_A* 1niu_A* 1l6f_A* 1xql_A* 1xqk_A* 1epv_A* 1ftx_A* 3uw6_A
Probab=56.93 E-value=1.4e+02 Score=28.52 Aligned_cols=72 Identities=22% Similarity=0.095 Sum_probs=48.1
Q ss_pred CCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCC-eEEcCCCCCHHHHHHHHhcCCCeEeecCCCCHHHH
Q 018508 94 FSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTP-AILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAA 172 (355)
Q Consensus 94 ~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~-~iVRV~~~~~~~i~~aLdaGa~GImvP~Vesaeea 172 (355)
+.+..++.+...|++.+- ....+++..+..+ |.. +++=++...+..+..+++.+ | .+.|+|.+++
T Consensus 46 g~~~v~~~l~~~G~~~f~------vas~~Ea~~lr~a----G~~~~Il~~g~~~~~~~~~~~~~~---i-~~~vds~~~l 111 (388)
T 1bd0_A 46 GDVQVARTALEAGASRLA------VAFLDEALALREK----GIEAPILVLGASRPADAALAAQQR---I-ALTVFRSDWL 111 (388)
T ss_dssp CHHHHHHHHHHHTCCEEE------ESSHHHHHHHHHT----TCCSCEEECSCCCGGGHHHHHHTT---E-EEEECCHHHH
T ss_pred CHHHHHHHHHHCCCCEEE------EeeHHHHHHHHhC----CcCCCEEEECCCCHHHHHHHHHcC---C-EEEECCHHHH
Confidence 456777878888987544 2456666654432 332 33334445566788888854 4 4889999999
Q ss_pred HHHHHHc
Q 018508 173 KEAVSYC 179 (355)
Q Consensus 173 ~~vv~a~ 179 (355)
+.+.+.+
T Consensus 112 ~~l~~~a 118 (388)
T 1bd0_A 112 EEASALY 118 (388)
T ss_dssp HHHHHHC
T ss_pred HHHHHHh
Confidence 9998876
No 354
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=56.91 E-value=1.4e+02 Score=28.73 Aligned_cols=59 Identities=15% Similarity=0.264 Sum_probs=39.5
Q ss_pred CCcEEEEeCCCCC-------CCHHHHHHHHHHHHh--------CCCCeEEcCCCCCH-H----HHHHHHhcCCCeEeec
Q 018508 106 GYDFVVVDMEHGP-------GGISDALACLHALAA--------TGTPAILRLPESCP-T----WAKKALDLGPQGVMFP 164 (355)
Q Consensus 106 G~D~vilDlEh~~-------~~~~~a~~~i~a~~~--------~g~~~iVRV~~~~~-~----~i~~aLdaGa~GImvP 164 (355)
++|+|-|.+-.-. .+.+.+.+++.++.. ...+++|++...-. . .++.+.++|++||++-
T Consensus 176 ~ad~ielNisCPn~~G~~~l~~~~~l~~ll~av~~~~~~~~~~~~~Pv~vKi~p~~~~~~~~~ia~~~~~aGadgi~v~ 254 (367)
T 3zwt_A 176 LADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLVKIAPDLTSQDKEDIASVVKELGIDGLIVT 254 (367)
T ss_dssp GCSEEEEECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHTSCGGGCCEEEEEECSCCCHHHHHHHHHHHHHHTCCEEEEC
T ss_pred hCCEEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHhhccccCCceEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 4899999885321 235566667666532 46788999876422 2 2466788999999874
No 355
>1w25_A Stalked-cell differentiation controlling protein; two-component system, ggdef domain, cyclic dinucleotide, cyclic-digmp; HET: C2E; 2.70A {Caulobacter vibrioides} SCOP: c.23.1.1 c.23.1.1 d.58.29.2 PDB: 2v0n_A* 2wb4_A*
Probab=56.68 E-value=1e+02 Score=29.32 Aligned_cols=102 Identities=12% Similarity=-0.034 Sum_probs=60.7
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHH-hCCCCeEEcCCCCCHHHHHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALA-ATGTPAILRLPESCPTWAKK 152 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~-~~g~~~iVRV~~~~~~~i~~ 152 (355)
..++..|......+. .-.+..+..+.+....+|.|++|+.-...+--++...++... ....++++=....+.....+
T Consensus 15 ~~l~~~L~~~~~~v~--~a~~~~~al~~~~~~~~dlvllD~~mp~~~G~~~~~~l~~~~~~~~~pii~lt~~~~~~~~~~ 92 (459)
T 1w25_A 15 RLLEAKLTAEYYEVS--TAMDGPTALAMAARDLPDIILLDVMMPGMDGFTVCRKLKDDPTTRHIPVVLITALDGRGDRIQ 92 (459)
T ss_dssp HHHHHHHHHTTCEEE--EESSHHHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEECSSCHHHHHH
T ss_pred HHHHHHHHHcCCEEE--EECCHHHHHHHHhcCCCCEEEEcCCCCCCCHHHHHHHHhcCcccCCCCEEEEECCCCHHHHHH
Confidence 446666765333332 223345566777777899999999865444334433444321 12345555555556777889
Q ss_pred HHhcCCCeEeecCCCCHHHHHHHHHH
Q 018508 153 ALDLGPQGVMFPMIDSPEAAKEAVSY 178 (355)
Q Consensus 153 aLdaGa~GImvP~Vesaeea~~vv~a 178 (355)
++++|+++.+. |=-+.+++...++.
T Consensus 93 a~~~Ga~~~l~-KP~~~~~l~~~i~~ 117 (459)
T 1w25_A 93 GLESGASDFLT-KPIDDVMLFARVRS 117 (459)
T ss_dssp HHHHTCCEEEE-SSCCHHHHHHHHHH
T ss_pred HHHcCCCEEEe-CCCCHHHHHHHHHH
Confidence 99999988653 44466776554443
No 356
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=56.63 E-value=1e+02 Score=27.44 Aligned_cols=88 Identities=15% Similarity=0.117 Sum_probs=60.9
Q ss_pred hHHHHHHHcCCcEE-EEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHH--HHHHHHHHh-CCCCeEEcCCCCCHHH
Q 018508 74 ESLKYRLQSNETLY-GLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDA--LACLHALAA-TGTPAILRLPESCPTW 149 (355)
Q Consensus 74 n~lk~~L~~G~~~~-gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a--~~~i~a~~~-~g~~~iVRV~~~~~~~ 149 (355)
.-++.+-+.|.+.+ | ..+|..+..+...|+|+|-+ + | .+.. ...++++.. .+..++|=+.+.++..
T Consensus 110 ~v~~~~~~~g~~~i~G----~~t~~e~~~A~~~Gad~vk~---F-P--a~~~~G~~~lk~i~~~~~~ipvvaiGGI~~~N 179 (225)
T 1mxs_A 110 DILEAGVDSEIPLLPG----ISTPSEIMMGYALGYRRFKL---F-P--AEISGGVAAIKAFGGPFGDIRFCPTGGVNPAN 179 (225)
T ss_dssp HHHHHHHHCSSCEECE----ECSHHHHHHHHTTTCCEEEE---T-T--HHHHTHHHHHHHHHTTTTTCEEEEBSSCCTTT
T ss_pred HHHHHHHHhCCCEEEe----eCCHHHHHHHHHCCCCEEEE---c-c--CccccCHHHHHHHHhhCCCCeEEEECCCCHHH
Confidence 33455555665544 5 56788888899999999988 2 3 2222 355666653 3356788888888889
Q ss_pred HHHHHh-cCCCeEeecCCCCHHH
Q 018508 150 AKKALD-LGPQGVMFPMIDSPEA 171 (355)
Q Consensus 150 i~~aLd-aGa~GImvP~Vesaee 171 (355)
+...++ .|+++|..--+-.++.
T Consensus 180 ~~~~l~~~Ga~~v~gSai~~~~~ 202 (225)
T 1mxs_A 180 VRNYMALPNVMCVGTTWMLDSSW 202 (225)
T ss_dssp HHHHHHSTTBCCEEECTTSCHHH
T ss_pred HHHHHhccCCEEEEEchhcCchh
Confidence 999999 6999987766666554
No 357
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=56.02 E-value=23 Score=33.18 Aligned_cols=60 Identities=12% Similarity=0.104 Sum_probs=38.4
Q ss_pred cCCcEEEEeCCCCC-------CCHHHHHHHHHHHHh-C---------CCCeEEcCCCC-CHH----HHHHHHhcCCCeEe
Q 018508 105 AGYDFVVVDMEHGP-------GGISDALACLHALAA-T---------GTPAILRLPES-CPT----WAKKALDLGPQGVM 162 (355)
Q Consensus 105 ~G~D~vilDlEh~~-------~~~~~a~~~i~a~~~-~---------g~~~iVRV~~~-~~~----~i~~aLdaGa~GIm 162 (355)
.|+|+|.+.+-.-. .+.+...+.+++++. . +.+++||+... +.. ..+.+.++|+++|.
T Consensus 164 ~g~d~iein~~sP~~~g~~~~~~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi~~~~~~~~~~~~a~~l~~~Gvd~i~ 243 (336)
T 1f76_A 164 AYAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPDLSEEELIQVADSLVRHNIDGVI 243 (336)
T ss_dssp GGCSEEEEECCCSSSTTGGGGGSHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEECCSCCCHHHHHHHHHHHHHTTCSEEE
T ss_pred ccCCEEEEEccCCCCCCcccccCHHHHHHHHHHHHHHHHhhhhcccccCceEEEecCCCCHHHHHHHHHHHHHcCCcEEE
Confidence 38999999874221 123334455555532 1 68999999754 222 24677889999998
Q ss_pred ec
Q 018508 163 FP 164 (355)
Q Consensus 163 vP 164 (355)
+-
T Consensus 244 vs 245 (336)
T 1f76_A 244 AT 245 (336)
T ss_dssp EC
T ss_pred Ee
Confidence 85
No 358
>3klo_A Transcriptional regulator VPST; REC domain, HTH domain, DNA-binding, transcription regulation; HET: C2E TAR; 2.80A {Vibrio cholerae} PDB: 3kln_A*
Probab=55.78 E-value=16 Score=31.41 Aligned_cols=105 Identities=11% Similarity=-0.027 Sum_probs=57.3
Q ss_pred hHHHHHHHc-CCcEEEEEEecCCHHHHHH-hhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHH
Q 018508 74 ESLKYRLQS-NETLYGLFLLSFSPTLAEI-SGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAK 151 (355)
Q Consensus 74 n~lk~~L~~-G~~~~gl~v~~~sp~~~e~-aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~ 151 (355)
..+++.|.. +...+ .....++.+.+.. +....+|.|++|+.-...+--++...++.......+++|=....+.....
T Consensus 21 ~~l~~~L~~~~~~~v-~~~~~~~~~~~~~~~~~~~~dlvllD~~mp~~~G~~~~~~lr~~~~~~~~ii~lt~~~~~~~~~ 99 (225)
T 3klo_A 21 RLLKEALESKLPLAL-EITPFSELWLEENKPESRSIQMLVIDYSRISDDVLTDYSSFKHISCPDAKEVIINCPQDIEHKL 99 (225)
T ss_dssp HHHHHHHHHHSSEEE-EEECGGGHHHHTTCSGGGGCCEEEEEGGGCCHHHHHHHHHHHHHHCTTCEEEEEEECTTCCHHH
T ss_pred HHHHHHHhhCCCceE-EEEeCCcHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHhhCCCCcEEEEECCcchhHHH
Confidence 456667763 22211 1112344444543 45667999999997543221122222322112234444333333444677
Q ss_pred HHHhcCCCeEeecCCCCHHHHHHHHHHcC
Q 018508 152 KALDLGPQGVMFPMIDSPEAAKEAVSYCR 180 (355)
Q Consensus 152 ~aLdaGa~GImvP~Vesaeea~~vv~a~~ 180 (355)
.++..|+++++ +|--+.+++...++.+.
T Consensus 100 ~~~~~Ga~~~l-~Kp~~~~~L~~~i~~~~ 127 (225)
T 3klo_A 100 LFKWNNLAGVF-YIDDDMDTLIKGMSKIL 127 (225)
T ss_dssp HTTSTTEEEEE-ETTCCHHHHHHHHHHHH
T ss_pred HHHHhCCCEEE-ecCCCHHHHHHHHHHHH
Confidence 88899998875 45568888888777664
No 359
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=55.53 E-value=33 Score=30.64 Aligned_cols=81 Identities=10% Similarity=-0.009 Sum_probs=40.6
Q ss_pred HHHHHHhhhcCCcEEEEe-CC-CC---CCCHHHHHHHHHHHHhCCCCeEEcCCCCC-HHHHHHHHhcCCCeEeecC--CC
Q 018508 96 PTLAEISGLAGYDFVVVD-ME-HG---PGGISDALACLHALAATGTPAILRLPESC-PTWAKKALDLGPQGVMFPM--ID 167 (355)
Q Consensus 96 p~~~e~aa~~G~D~vilD-lE-h~---~~~~~~a~~~i~a~~~~g~~~iVRV~~~~-~~~i~~aLdaGa~GImvP~--Ve 167 (355)
.+.++.+...|+++|++- .. ++ ..+.+..+.+. +....++ |=..+.. +..+.+++.+|++||++=. ..
T Consensus 159 ~e~~~~~~~~G~~~i~~t~~~~~g~~~g~~~~~i~~l~---~~~~ipv-ia~GGI~~~ed~~~~~~~Gadgv~vgsal~~ 234 (266)
T 2w6r_A 159 RDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVR---PLTTLPI-IASGGAGKMEHFLEAFLAGADAALAASVFHF 234 (266)
T ss_dssp HHHHHHHHHTTCSEEEEEETTTTTTCSCCCHHHHHHHG---GGCCSCE-EEESCCCSHHHHHHHHHHTCSEEEESTTTC-
T ss_pred HHHHHHHHHcCCCEEEEEeecCCCCcCCCCHHHHHHHH---HHcCCCE-EEeCCCCCHHHHHHHHHcCCHHHHccHHHHc
Confidence 356688889999999972 21 11 23433332222 1234443 3344444 6889999999999988854 34
Q ss_pred CHHHHHHHHHHcC
Q 018508 168 SPEAAKEAVSYCR 180 (355)
Q Consensus 168 saeea~~vv~a~~ 180 (355)
.....+++.++++
T Consensus 235 ~~~~~~~~~~~l~ 247 (266)
T 2w6r_A 235 REIDMRELKEYLK 247 (266)
T ss_dssp -------------
T ss_pred CCCCHHHHHHHHH
Confidence 4445555555543
No 360
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=55.37 E-value=1.2e+02 Score=28.09 Aligned_cols=29 Identities=21% Similarity=0.326 Sum_probs=22.4
Q ss_pred eEEEEEEccHHHHHHHHHHhccCCccEEEEChh
Q 018508 213 LLIMCQVESEEGVKRAEDIAAVDGVDCVQMGPL 245 (355)
Q Consensus 213 i~vi~mIET~~av~nieeIaavpgVD~l~iGp~ 245 (355)
+.+-.-|-||+-+..+-|+ |.|+|++|+.
T Consensus 190 VI~eGGI~TPsDAa~AmeL----GAdgVlVgSA 218 (265)
T 1wv2_A 190 VLVDAGVGTASDAAIAMEL----GCEAVLMNTA 218 (265)
T ss_dssp BEEESCCCSHHHHHHHHHH----TCSEEEESHH
T ss_pred EEEeCCCCCHHHHHHHHHc----CCCEEEEChH
Confidence 3444568899888877775 7899999986
No 361
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=55.15 E-value=19 Score=33.90 Aligned_cols=73 Identities=8% Similarity=-0.204 Sum_probs=50.5
Q ss_pred EEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHh-CCCCeEEcCCCCCHHHHHHHHhcCCCeEeec
Q 018508 86 LYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAA-TGTPAILRLPESCPTWAKKALDLGPQGVMFP 164 (355)
Q Consensus 86 ~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~-~g~~~iVRV~~~~~~~i~~aLdaGa~GImvP 164 (355)
.++. -..+.+.++.+...|+|+|.+|- .+.++.++.++.+.. ....++.=..+.+...+....+.|+++|.+=
T Consensus 195 ~I~V--EV~tleea~eA~~aGaD~I~LDn----~~~e~l~~av~~l~~~~~~v~ieASGGIt~eni~~~a~tGVD~IsvG 268 (285)
T 1o4u_A 195 KIEV--EVENLEDALRAVEAGADIVMLDN----LSPEEVKDISRRIKDINPNVIVEVSGGITEENVSLYDFETVDVISSS 268 (285)
T ss_dssp CEEE--EESSHHHHHHHHHTTCSEEEEES----CCHHHHHHHHHHHHHHCTTSEEEEEECCCTTTGGGGCCTTCCEEEEG
T ss_pred eEEE--EeCCHHHHHHHHHcCCCEEEECC----CCHHHHHHHHHHhhccCCCceEEEECCCCHHHHHHHHHcCCCEEEEe
Confidence 4454 45678888888999999999998 566777776665542 1122333334456667888888999988763
No 362
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=54.96 E-value=16 Score=31.19 Aligned_cols=57 Identities=9% Similarity=-0.036 Sum_probs=38.4
Q ss_pred cHHHHHHHHHH-hc-cCCccEEEEChhhHHhhcCCCCCCCCHHHHHHHHHHHHHHHhCCCce
Q 018508 221 SEEGVKRAEDI-AA-VDGVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVAEKGVLGGGKAY 280 (355)
Q Consensus 221 T~~av~nieeI-aa-vpgVD~l~iGp~DLs~slG~~~~~~~p~v~~ai~~iv~aa~a~g~~~ 280 (355)
|...+.++++. .+ -|.+-.|++|.||+....+. .....+..-+..+++.+++.+.++
T Consensus 63 t~~~l~r~~~~v~~~~Pd~vvi~~G~ND~~~~~~~---~~~~~~~~~l~~ii~~~~~~~~~i 121 (209)
T 4hf7_A 63 SYQFLLRFREDVINLSPALVVINAGTNDVAENTGA---YNEDYTFGNIASMAELAKANKIKV 121 (209)
T ss_dssp HHHHHHHHHHHTGGGCCSEEEECCCHHHHTTSSSS---CCHHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHhcCCCEEEEEeCCCcCcccccc---ccHHHHHHHHHHhhHHHhccCceE
Confidence 56677888774 33 47788888999998644332 122345666788888888877653
No 363
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=54.70 E-value=43 Score=31.32 Aligned_cols=31 Identities=16% Similarity=0.251 Sum_probs=25.8
Q ss_pred HHHHhcCCCeEeecCCCCHHHHHHHHHHcCCC
Q 018508 151 KKALDLGPQGVMFPMIDSPEAAKEAVSYCRFP 182 (355)
Q Consensus 151 ~~aLdaGa~GImvP~Vesaeea~~vv~a~~~p 182 (355)
++..++||++|+++.|.+. .++++.+.+.-|
T Consensus 180 ~a~~eAGA~~ivlE~vp~~-~a~~It~~l~iP 210 (275)
T 3vav_A 180 RAVEEAGAQLIVLEAVPTL-VAAEVTRELSIP 210 (275)
T ss_dssp HHHHHHTCSEEEEESCCHH-HHHHHHHHCSSC
T ss_pred HHHHHcCCCEEEecCCCHH-HHHHHHHhCCCC
Confidence 4456799999999999775 899999988755
No 364
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=54.46 E-value=49 Score=30.56 Aligned_cols=68 Identities=12% Similarity=0.163 Sum_probs=49.1
Q ss_pred HHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCH--------H----HHHHHHhcCCCeEee
Q 018508 96 PTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCP--------T----WAKKALDLGPQGVMF 163 (355)
Q Consensus 96 p~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~--------~----~i~~aLdaGa~GImv 163 (355)
.+.++.+...|||.|=|.---.....++-...|+.+...|..++-=|..-++ . .+++.|++||+-||+
T Consensus 88 ~~yl~~~k~lGf~~iEiS~G~i~l~~~~~~~~I~~~~~~G~~v~~EvG~k~~~~~~~~~~~~~I~~~~~~LeAGA~~Vii 167 (251)
T 1qwg_A 88 DEFLNECEKLGFEAVEISDGSSDISLEERNNAIKRAKDNGFMVLTEVGKKMPDKDKQLTIDDRIKLINFDLDAGADYVII 167 (251)
T ss_dssp HHHHHHHHHHTCCEEEECCSSSCCCHHHHHHHHHHHHHTTCEEEEEECCSSHHHHTTCCHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHCCCEEeeeccccCCcccCCCCHHHHHHHHHHHHHCCCcEEEE
Confidence 3467788889999877665555677788888888887777666555444333 2 357789999999998
No 365
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=54.32 E-value=19 Score=33.41 Aligned_cols=79 Identities=10% Similarity=0.034 Sum_probs=50.7
Q ss_pred EEEEEecCCHH----HHHHhhhcCCc---EEEEeCCCC--------CCCHHHHHHHHHHHHh-CCCCeEEcCCCC-CHHH
Q 018508 87 YGLFLLSFSPT----LAEISGLAGYD---FVVVDMEHG--------PGGISDALACLHALAA-TGTPAILRLPES-CPTW 149 (355)
Q Consensus 87 ~gl~v~~~sp~----~~e~aa~~G~D---~vilDlEh~--------~~~~~~a~~~i~a~~~-~g~~~iVRV~~~-~~~~ 149 (355)
++.-+...+++ .++.+...|+| +|-|.+-.- ..+.+.+.+.+++++. .+.+++|++... +...
T Consensus 96 ~~~~i~g~~~~~~~~~a~~~~~~g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~~~~Pv~vK~~~~~~~~~ 175 (314)
T 2e6f_A 96 LFLSISGLSVEENVAMVRRLAPVAQEKGVLLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLAYGLPFGVKMPPYFDIAH 175 (314)
T ss_dssp EEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHHHCSCEEEEECCCCCHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHHhCCCcCceEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHhcCCCEEEEECCCCCHHH
Confidence 33334455654 34455667899 899987411 1155666777777653 377899998653 3333
Q ss_pred ----HHHHHhcC-CCeEeecC
Q 018508 150 ----AKKALDLG-PQGVMFPM 165 (355)
Q Consensus 150 ----i~~aLdaG-a~GImvP~ 165 (355)
++.+.++| +++|.++-
T Consensus 176 ~~~~a~~~~~aG~~d~i~v~~ 196 (314)
T 2e6f_A 176 FDTAAAVLNEFPLVKFVTCVN 196 (314)
T ss_dssp HHHHHHHHHTCTTEEEEEECC
T ss_pred HHHHHHHHHhcCCceEEEEeC
Confidence 45677899 99999865
No 366
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=54.08 E-value=62 Score=25.50 Aligned_cols=81 Identities=16% Similarity=0.093 Sum_probs=50.1
Q ss_pred EEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHH-hCCCCeEEcCCCCCHHHHHHHHhcCCCeEeecCCC
Q 018508 89 LFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALA-ATGTPAILRLPESCPTWAKKALDLGPQGVMFPMID 167 (355)
Q Consensus 89 l~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~-~~g~~~iVRV~~~~~~~i~~aLdaGa~GImvP~Ve 167 (355)
+.....++..++.+...++|+|++=.. +.+.-...+..++ ......++|++... ....+..+|++-|+.|.-.
T Consensus 53 ~~gd~~~~~~l~~~~~~~~d~vi~~~~----~~~~n~~~~~~a~~~~~~~iia~~~~~~--~~~~l~~~G~~~vi~p~~~ 126 (141)
T 3llv_A 53 VIADPTDESFYRSLDLEGVSAVLITGS----DDEFNLKILKALRSVSDVYAIVRVSSPK--KKEEFEEAGANLVVLVADA 126 (141)
T ss_dssp EECCTTCHHHHHHSCCTTCSEEEECCS----CHHHHHHHHHHHHHHCCCCEEEEESCGG--GHHHHHHTTCSEEEEHHHH
T ss_pred EECCCCCHHHHHhCCcccCCEEEEecC----CHHHHHHHHHHHHHhCCceEEEEEcChh--HHHHHHHcCCCEEECHHHH
Confidence 344566777777765567898887544 2232222333332 23556789988754 3445567899999999876
Q ss_pred CHHHHHHH
Q 018508 168 SPEAAKEA 175 (355)
Q Consensus 168 saeea~~v 175 (355)
.+..+...
T Consensus 127 ~~~~l~~~ 134 (141)
T 3llv_A 127 VKQAFMDK 134 (141)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 65555443
No 367
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=53.49 E-value=74 Score=24.41 Aligned_cols=103 Identities=11% Similarity=0.008 Sum_probs=55.6
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHh-CCCCeEEcCCCCCHHHHHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAA-TGTPAILRLPESCPTWAKK 152 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~-~g~~~iVRV~~~~~~~i~~ 152 (355)
..+++.|......+ ..-.+..+..+.+....+|.|++|+.-...+--++...++.... ...++++=....+......
T Consensus 17 ~~l~~~L~~~g~~v--~~~~~~~~al~~l~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~ls~~~~~~~~~~ 94 (138)
T 3c3m_A 17 DVFVTMLERGGYRP--ITAFSGEECLEALNATPPDLVLLDIMMEPMDGWETLERIKTDPATRDIPVLMLTAKPLTPEEAN 94 (138)
T ss_dssp HHHHHHHHHTTCEE--EEESSHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEESSCCCHHHHH
T ss_pred HHHHHHHHHcCceE--EEeCCHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHcCcccCCCCEEEEECCCChHHHHH
Confidence 45666776433222 22223345566777778999999998755443333333433211 2334443333333333344
Q ss_pred HHhcCCCeEeecCCCCHHHHHHHHHHc
Q 018508 153 ALDLGPQGVMFPMIDSPEAAKEAVSYC 179 (355)
Q Consensus 153 aLdaGa~GImvP~Vesaeea~~vv~a~ 179 (355)
.+.+|+++++ +|--+.+++...++.+
T Consensus 95 ~~~~~~~~~l-~KP~~~~~L~~~i~~~ 120 (138)
T 3c3m_A 95 EYGSYIEDYI-LKPTTHHQLYEAIEHV 120 (138)
T ss_dssp HTTTTCSEEE-ECCCHHHHHHHHHHHH
T ss_pred HhhcCHhheE-eCCCCHHHHHHHHHHH
Confidence 5566677754 4555778887777654
No 368
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=53.36 E-value=62 Score=31.18 Aligned_cols=67 Identities=21% Similarity=0.191 Sum_probs=41.4
Q ss_pred HHHHhhhcCCcEEEEeCCCC--------CC-----C-----H-HH---HHHHHHHHHh-CC-CCeEEcCCCCC-------
Q 018508 98 LAEISGLAGYDFVVVDMEHG--------PG-----G-----I-SD---ALACLHALAA-TG-TPAILRLPESC------- 146 (355)
Q Consensus 98 ~~e~aa~~G~D~vilDlEh~--------~~-----~-----~-~~---a~~~i~a~~~-~g-~~~iVRV~~~~------- 146 (355)
.++.+..+|||.|=|.+-|+ |. + . .. +.+++++++. .| .++.||++..+
T Consensus 172 AA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~V~vrls~~~~~~g~~~ 251 (376)
T 1icp_A 172 AARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSDRVGIRISPFAHYNEAGD 251 (376)
T ss_dssp HHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCTTTCCC
T ss_pred HHHHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHhcCCceEEEeccccccCCCCC
Confidence 44566779999999999884 21 1 1 12 3345566542 23 28899997431
Q ss_pred --H----H-HHHHHHhcCCCeEeec
Q 018508 147 --P----T-WAKKALDLGPQGVMFP 164 (355)
Q Consensus 147 --~----~-~i~~aLdaGa~GImvP 164 (355)
+ . .++.+-+.|++.|-++
T Consensus 252 ~~~~~~~~~la~~le~~Gvd~i~v~ 276 (376)
T 1icp_A 252 TNPTALGLYMVESLNKYDLAYCHVV 276 (376)
T ss_dssp SCHHHHHHHHHHHHGGGCCSEEEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEc
Confidence 1 1 2345557899988774
No 369
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=53.31 E-value=37 Score=31.85 Aligned_cols=68 Identities=15% Similarity=-0.079 Sum_probs=49.7
Q ss_pred ecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHh-CCCCeEEcCCCCCHHHHHHHHhcCCCeEee
Q 018508 92 LSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAA-TGTPAILRLPESCPTWAKKALDLGPQGVMF 163 (355)
Q Consensus 92 ~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~-~g~~~iVRV~~~~~~~i~~aLdaGa~GImv 163 (355)
-..+.+.++.+...|+|+|.+|- .+.+..+.+++.+.. .+..+++=..+.+...+...++.|+++|-+
T Consensus 203 ev~tlee~~~A~~aGaD~I~ld~----~~~~~l~~~v~~l~~~~~~~~I~ASGGIt~~ni~~~~~aGaD~i~v 271 (299)
T 2jbm_A 203 ECSSLQEAVQAAEAGADLVLLDN----FKPEELHPTATVLKAQFPSVAVEASGGITLDNLPQFCGPHIDVISM 271 (299)
T ss_dssp EESSHHHHHHHHHTTCSEEEEES----CCHHHHHHHHHHHHHHCTTSEEEEESSCCTTTHHHHCCTTCCEEEC
T ss_pred ecCCHHHHHHHHHcCCCEEEECC----CCHHHHHHHHHHhhccCCCeeEEEECCCCHHHHHHHHHCCCCEEEE
Confidence 44566777778889999999986 456777766665542 222345555677788899999999999876
No 370
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=53.16 E-value=54 Score=32.33 Aligned_cols=72 Identities=21% Similarity=0.076 Sum_probs=43.9
Q ss_pred ecCCHHHHHHhhhcCCcEEEEeCCCC------------CCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHHHhcCCC
Q 018508 92 LSFSPTLAEISGLAGYDFVVVDMEHG------------PGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQ 159 (355)
Q Consensus 92 ~~~sp~~~e~aa~~G~D~vilDlEh~------------~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~aLdaGa~ 159 (355)
++.+.+.+..+...|+|+|.+-...+ ....+...++..++...+.++++==.-.++..+.+++.+||+
T Consensus 281 ~v~t~~~a~~~~~~Gad~I~vg~g~g~~~~tr~~~~~~~p~~~~l~~~~~~~~~~~ipvia~GGi~~~~di~kal~~GA~ 360 (491)
T 1zfj_A 281 NIATAEGARALYDAGVDVVKVGIGPGSICTTRVVAGVGVPQVTAIYDAAAVAREYGKTIIADGGIKYSGDIVKALAAGGN 360 (491)
T ss_dssp EECSHHHHHHHHHTTCSEEEECSSCCTTBCHHHHTCCCCCHHHHHHHHHHHHHHTTCEEEEESCCCSHHHHHHHHHTTCS
T ss_pred CccCHHHHHHHHHcCCCEEEECccCCcceEEeeecCCCCCcHHHHHHHHHHHhhcCCCEEeeCCCCCHHHHHHHHHcCCc
Confidence 34566777788899999998864322 112233333444333445555441111246788899999999
Q ss_pred eEee
Q 018508 160 GVMF 163 (355)
Q Consensus 160 GImv 163 (355)
+|++
T Consensus 361 ~v~v 364 (491)
T 1zfj_A 361 AVML 364 (491)
T ss_dssp EEEE
T ss_pred ceee
Confidence 9998
No 371
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=53.16 E-value=80 Score=30.49 Aligned_cols=68 Identities=21% Similarity=0.163 Sum_probs=41.6
Q ss_pred HHHHhh-hcCCcEEEEeCCCC--------CC------------CHH----HHHHHHHHHHh-CC-CCeEEcCCCCC----
Q 018508 98 LAEISG-LAGYDFVVVDMEHG--------PG------------GIS----DALACLHALAA-TG-TPAILRLPESC---- 146 (355)
Q Consensus 98 ~~e~aa-~~G~D~vilDlEh~--------~~------------~~~----~a~~~i~a~~~-~g-~~~iVRV~~~~---- 146 (355)
.++.+. .+|||.|=|..-|+ |. +.+ -+.+++++++. .| .++.||++..+
T Consensus 179 AA~~a~~~aGfDgVEih~a~GYLl~QFlsp~~N~R~~D~yGG~slenR~r~~~eiv~aVr~avg~~~v~vRis~~~~~~~ 258 (379)
T 3aty_A 179 GAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKSVCDAVGSDRVGLRISPLNGVHG 258 (379)
T ss_dssp HHHHHHHTSCCSEEEEEECTTSHHHHHHSTTTCCCCSSTTCTTSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCGGG
T ss_pred HHHHHHHhcCCCEEEEcCcCchHHhhccCCCCCccccCCCCccChhhhHHHHHHHHHHHHHhcCCCeEEEEECccccccc
Confidence 456667 89999999998774 21 222 12345555542 23 36899987643
Q ss_pred -----H-H----HHHHHHhcCCCeEeecC
Q 018508 147 -----P-T----WAKKALDLGPQGVMFPM 165 (355)
Q Consensus 147 -----~-~----~i~~aLdaGa~GImvP~ 165 (355)
+ . .++.+.+.|++.|-++-
T Consensus 259 ~~~~~~~~~~~~la~~l~~~Gvd~i~v~~ 287 (379)
T 3aty_A 259 MIDSNPEALTKHLCKKIEPLSLAYLHYLR 287 (379)
T ss_dssp CCCSCHHHHHHHHHHHHGGGCCSEEEEEC
T ss_pred CCCCCCHHHHHHHHHHHHHhCCCEEEEcC
Confidence 1 1 23455578999887754
No 372
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=52.70 E-value=29 Score=33.66 Aligned_cols=64 Identities=19% Similarity=0.056 Sum_probs=45.9
Q ss_pred HHhhhcCCcEEEEeCCCC--------CCCHHHHHHHHHHHH-hCCCCeEEcCCC--CCHHHHHHHHhcCCCeEee
Q 018508 100 EISGLAGYDFVVVDMEHG--------PGGISDALACLHALA-ATGTPAILRLPE--SCPTWAKKALDLGPQGVMF 163 (355)
Q Consensus 100 e~aa~~G~D~vilDlEh~--------~~~~~~a~~~i~a~~-~~g~~~iVRV~~--~~~~~i~~aLdaGa~GImv 163 (355)
+.+-..|+|++.+++-.. ..+.....+.++.+. ..+.+++|..-+ ..+..++++.++|+++|.|
T Consensus 162 ~~ve~~~adal~ihln~~qe~~~p~Gd~~~~~~~~~I~~l~~~~~~PVivK~vg~g~s~e~A~~l~~aGad~I~V 236 (365)
T 3sr7_A 162 QAVRDLQPLFLQVHINLMQELLMPEGEREFRSWKKHLSDYAKKLQLPFILKEVGFGMDVKTIQTAIDLGVKTVDI 236 (365)
T ss_dssp HHHHHHCCSCEEEEECHHHHHTSSSSCCCCHHHHHHHHHHHHHCCSCEEEEECSSCCCHHHHHHHHHHTCCEEEC
T ss_pred HHHHhcCCCEEEEeccccccccCCCCCCcHHHHHHHHHHHHHhhCCCEEEEECCCCCCHHHHHHHHHcCCCEEEE
Confidence 334478999999998753 234445556666654 468899999322 4677889999999999997
No 373
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=51.80 E-value=50 Score=31.66 Aligned_cols=77 Identities=22% Similarity=0.171 Sum_probs=45.9
Q ss_pred CCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCC-------CCCHHHHHHHHHHHHhCCCCeEEcCCCC-CHHHHHHHH
Q 018508 83 NETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHG-------PGGISDALACLHALAATGTPAILRLPES-CPTWAKKAL 154 (355)
Q Consensus 83 G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~-------~~~~~~a~~~i~a~~~~g~~~iVRV~~~-~~~~i~~aL 154 (355)
+.|++.= ...+++.++.+..+|+|+|.+-. |+ +...+...++..++ .+..+++=..+. +...+.+++
T Consensus 225 ~~pv~vK--~~~~~e~a~~a~~~Gad~I~vs~-~ggr~~~~~~~~~~~l~~v~~~~--~~~ipvia~GGI~~~~D~~k~l 299 (370)
T 1gox_A 225 SLPILVK--GVITAEDARLAVQHGAAGIIVSN-HGARQLDYVPATIMALEEVVKAA--QGRIPVFLDGGVRRGTDVFKAL 299 (370)
T ss_dssp CSCEEEE--CCCSHHHHHHHHHTTCSEEEECC-GGGTSSTTCCCHHHHHHHHHHHT--TTSSCEEEESSCCSHHHHHHHH
T ss_pred CCCEEEE--ecCCHHHHHHHHHcCCCEEEECC-CCCccCCCcccHHHHHHHHHHHh--CCCCEEEEECCCCCHHHHHHHH
Confidence 5565421 24678999999999999999943 32 12222222222221 222334333444 356788899
Q ss_pred hcCCCeEeec
Q 018508 155 DLGPQGVMFP 164 (355)
Q Consensus 155 daGa~GImvP 164 (355)
.+||++|++=
T Consensus 300 ~~GAdaV~iG 309 (370)
T 1gox_A 300 ALGAAGVFIG 309 (370)
T ss_dssp HHTCSEEEEC
T ss_pred HcCCCEEeec
Confidence 9999998873
No 374
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=51.79 E-value=72 Score=29.76 Aligned_cols=72 Identities=7% Similarity=-0.121 Sum_probs=49.0
Q ss_pred EEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhC-CCCeEEcCCCCCHHHHHHHHhcCCCeEeec
Q 018508 89 LFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAAT-GTPAILRLPESCPTWAKKALDLGPQGVMFP 164 (355)
Q Consensus 89 l~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~-g~~~iVRV~~~~~~~i~~aLdaGa~GImvP 164 (355)
+-+-..+.+.++.+...|+|+|.+|- .+.++.++.++.+... ....+.=..+.++..+....+.|+++|.+=
T Consensus 197 I~Vev~t~eea~eal~aGaD~I~LDn----~~~~~~~~~v~~l~~~~~~v~ieaSGGIt~~~i~~~a~tGVD~isvG 269 (284)
T 1qpo_A 197 CEVEVDSLEQLDAVLPEKPELILLDN----FAVWQTQTAVQRRDSRAPTVMLESSGGLSLQTAATYAETGVDYLAVG 269 (284)
T ss_dssp EEEEESSHHHHHHHGGGCCSEEEEET----CCHHHHHHHHHHHHHHCTTCEEEEESSCCTTTHHHHHHTTCSEEECG
T ss_pred EEEEeCCHHHHHHHHHcCCCEEEECC----CCHHHHHHHHHHhhccCCCeEEEEECCCCHHHHHHHHhcCCCEEEEC
Confidence 33445578888888899999999998 4567776666655431 112222223456778899999999998753
No 375
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=51.36 E-value=96 Score=30.17 Aligned_cols=48 Identities=21% Similarity=0.291 Sum_probs=30.4
Q ss_pred HHHHhhhcCCcEEEEeCCCC--------CC----------CH-HH---HHHHHHHHHh-CC-CCeEEcCCCC
Q 018508 98 LAEISGLAGYDFVVVDMEHG--------PG----------GI-SD---ALACLHALAA-TG-TPAILRLPES 145 (355)
Q Consensus 98 ~~e~aa~~G~D~vilDlEh~--------~~----------~~-~~---a~~~i~a~~~-~g-~~~iVRV~~~ 145 (355)
.++.+..+|||.|=|.+-|+ |. +. .. +.+++++++. .| .++.||++..
T Consensus 176 AA~~a~~AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~yGGslenR~rf~~Eiv~aVr~avg~~~V~vRls~~ 247 (402)
T 2hsa_B 176 SALNAIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRCKFITQVVQAVVSAIGADRVGVRVSPA 247 (402)
T ss_dssp HHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECSS
T ss_pred HHHHHHHcCCCEEEECCccchHHHhccCCccCccCCccCcChhhhhHHHHHHHHHHHHHhCCCcEEEEeccc
Confidence 44566679999999999884 32 11 12 3345566542 23 3789998754
No 376
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=51.34 E-value=70 Score=30.50 Aligned_cols=67 Identities=15% Similarity=0.047 Sum_probs=48.6
Q ss_pred EecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHHHhcCCCeEee
Q 018508 91 LLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMF 163 (355)
Q Consensus 91 v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~aLdaGa~GImv 163 (355)
+-..+.+.++.+...|+|.|.||- .+.+++++.++.++ +...+.=-.+.+...+....+.|+|+|.+
T Consensus 236 VEVdtldea~eAl~aGaD~I~LDn----~~~~~l~~av~~l~--~~v~ieaSGGIt~~~I~~~a~tGVD~isv 302 (320)
T 3paj_A 236 VETETLAELEEAISAGADIIMLDN----FSLEMMREAVKINA--GRAALENSGNITLDNLKECAETGVDYISV 302 (320)
T ss_dssp EEESSHHHHHHHHHTTCSEEEEES----CCHHHHHHHHHHHT--TSSEEEEESSCCHHHHHHHHTTTCSEEEC
T ss_pred EEECCHHHHHHHHHcCCCEEEECC----CCHHHHHHHHHHhC--CCCeEEEECCCCHHHHHHHHHcCCCEEEE
Confidence 355667778888889999999997 45677777666543 22333333556788899999999999865
No 377
>3kw3_A Alanine racemase; niaid, ssgcid, seattle structural genomics center for infect disease, iodide SOAK, LLP, CAT-scratch DI isomerase; HET: LLP; 2.04A {Bartonella henselae}
Probab=51.31 E-value=1e+02 Score=29.64 Aligned_cols=73 Identities=16% Similarity=0.137 Sum_probs=47.2
Q ss_pred CHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhC-CCCeEEcCCCCCHHHHHHHHhcCCCeEeecCCCCHHHHH
Q 018508 95 SPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAAT-GTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAK 173 (355)
Q Consensus 95 sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~-g~~~iVRV~~~~~~~i~~aLdaGa~GImvP~Vesaeea~ 173 (355)
.+..++.+...|++.+. ....+++..+..+ . -..+++-+....+..+..+++.+ + .+.|++.++++
T Consensus 59 ~~~va~~l~~~G~~~f~------Va~~~Ea~~lr~a---g~~~~~ilvl~~~~~~~~~~~~~~~---i-~~~V~s~~~l~ 125 (376)
T 3kw3_A 59 AHKIAPALYQAGCRTFF------VAQIEEALQLKAV---LPENVMIALLNGFPHKAEEFVAQSG---I-IPLLNSWSTIE 125 (376)
T ss_dssp HHHHHHHHHHTTCCEEE------ESSHHHHHHHHHH---SCSSCEEEETTCCCTTCHHHHHHTT---C-EEEECSHHHHH
T ss_pred HHHHHHHHHHcCCCEEE------EeEHHHHHHHHhc---CCCCCCEEEEeCCCHHHHHHHHHCC---C-EEEECCHHHHH
Confidence 36677888889998654 3456666554332 2 12345555555555567777654 3 47899999999
Q ss_pred HHHHHcC
Q 018508 174 EAVSYCR 180 (355)
Q Consensus 174 ~vv~a~~ 180 (355)
.+.+.++
T Consensus 126 ~l~~~a~ 132 (376)
T 3kw3_A 126 DWQTLCQ 132 (376)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9887664
No 378
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=50.54 E-value=56 Score=29.57 Aligned_cols=70 Identities=10% Similarity=0.050 Sum_probs=48.1
Q ss_pred cCCcEEEEeCCCC-CCCHHHHHHHHHHHH-hC-CCCeEEcCCCCCHHHHHHHHhcCCCeEeec--CCCCHHHHHHHHHHc
Q 018508 105 AGYDFVVVDMEHG-PGGISDALACLHALA-AT-GTPAILRLPESCPTWAKKALDLGPQGVMFP--MIDSPEAAKEAVSYC 179 (355)
Q Consensus 105 ~G~D~vilDlEh~-~~~~~~a~~~i~a~~-~~-g~~~iVRV~~~~~~~i~~aLdaGa~GImvP--~Vesaeea~~vv~a~ 179 (355)
.|+++|.+|. -+ ..+. ++++.++ .. ..+++|--.=.+++++++++ .||++|++= -+++++.++++++++
T Consensus 152 ~g~~~VYld~-sG~~~~~----~~i~~i~~~~~~~Pv~vGGGI~t~e~a~~~~-~gAD~VVVGSa~v~~p~~~~~~v~a~ 225 (228)
T 3vzx_A 152 LQLPIFYLEY-SGVLGDI----EAVKKTKAVLETSTLFYGGGIKDAETAKQYA-EHADVIVVGNAVYEDFDRALKTVAAV 225 (228)
T ss_dssp TTCSEEEEEC-TTSCCCH----HHHHHHHHHCSSSEEEEESSCCSHHHHHHHH-TTCSEEEECTHHHHCHHHHHHHHHHH
T ss_pred cCCCEEEecC-CCCcCCH----HHHHHHHHhcCCCCEEEeCCCCCHHHHHHHH-hCCCEEEEChHHhcCHHHHHHHHHHH
Confidence 5689999998 34 3332 3333332 34 56777766656788999988 799999973 356778888888776
Q ss_pred C
Q 018508 180 R 180 (355)
Q Consensus 180 ~ 180 (355)
+
T Consensus 226 ~ 226 (228)
T 3vzx_A 226 K 226 (228)
T ss_dssp H
T ss_pred h
Confidence 4
No 379
>2vd8_A Alanine racemase; pyridoxal 5'-phosphate, peptidoglycan synthesis, PLP, OPPF, L-alanine, isomerase, D- alanine, pyridoxal phosphate; HET: MLY LLP; 1.47A {Bacillus anthracis} PDB: 2vd9_A* 3ha1_A*
Probab=50.07 E-value=1.7e+02 Score=27.71 Aligned_cols=90 Identities=20% Similarity=0.069 Sum_probs=55.7
Q ss_pred HHHHHHHcCCcEEEEEEec-----CCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCC-eEEcCCCCCHH
Q 018508 75 SLKYRLQSNETLYGLFLLS-----FSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTP-AILRLPESCPT 148 (355)
Q Consensus 75 ~lk~~L~~G~~~~gl~v~~-----~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~-~iVRV~~~~~~ 148 (355)
.+|+++. +...+..-+.. +.+..++.+...|++.+- ....+++..+..+ |.. +++=++...+.
T Consensus 27 ~l~~~~~-~~~~l~~vvKanaYGhg~~~v~~~l~~~G~~~f~------vas~~Ea~~lr~~----G~~~~il~~g~~~~~ 95 (391)
T 2vd8_A 27 HIXEFIP-SDVEIFAVVKGNAYGHDYVPVAXIALEAGATRLA------VAFLDEALVLRRA----GITAPILVLGPSPPR 95 (391)
T ss_dssp HHHHHSC-TTCEEEEECHHHHHTTCHHHHHHHHHHTTCCEEE------ESSHHHHHHHHHT----TCCSCEEECSCCCGG
T ss_pred HHHHhcC-CCCEEEEEEEecccCCChHHHHHHHHHcCCCeEE------eecHHHHHHHHhc----CCCCceEEecCCChH
Confidence 3444442 23444444444 467788888889987544 2456666654432 322 23324545666
Q ss_pred HHHHHHhcCCCeEeecCCCCHHHHHHHHHHcC
Q 018508 149 WAKKALDLGPQGVMFPMIDSPEAAKEAVSYCR 180 (355)
Q Consensus 149 ~i~~aLdaGa~GImvP~Vesaeea~~vv~a~~ 180 (355)
.+..+++.+ | .+.|+|.++++.+.+ ++
T Consensus 96 ~~~~~~~~~---i-~~~vds~~~l~~l~~-a~ 122 (391)
T 2vd8_A 96 DINVAAEND---V-ALTVFQXEWVDEAIX-LW 122 (391)
T ss_dssp GHHHHHHTT---E-EEECCCHHHHHHHHH-HC
T ss_pred HHHHHHHCC---e-EEEEcCHHHHHHHHH-HH
Confidence 788888754 4 579999999999988 54
No 380
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=49.78 E-value=87 Score=27.49 Aligned_cols=64 Identities=16% Similarity=0.039 Sum_probs=36.5
Q ss_pred HHHHHhhhcCCcEEEEeC-C----CCCCCHHHHHHHHHHHHhCCCCeEEcCCCCC-HHHHHHHHhc-----C-CCeEeec
Q 018508 97 TLAEISGLAGYDFVVVDM-E----HGPGGISDALACLHALAATGTPAILRLPESC-PTWAKKALDL-----G-PQGVMFP 164 (355)
Q Consensus 97 ~~~e~aa~~G~D~vilDl-E----h~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~-~~~i~~aLda-----G-a~GImvP 164 (355)
+.++.+...|+++|++-- . ....+.+..+++.... ..++++ ..+.. +..+.++++. | ++||++=
T Consensus 148 e~~~~~~~~G~~~i~~t~~~~~g~~~g~~~~~i~~l~~~~---~iPvia-~GGI~~~~d~~~~~~~~~~~~G~adgv~vg 223 (241)
T 1qo2_A 148 SLLKRLKEYGLEEIVHTEIEKDGTLQEHDFSLTKKIAIEA---EVKVLA-AGGISSENSLKTAQKVHTETNGLLKGVIVG 223 (241)
T ss_dssp HHHHHHHTTTCCEEEEEETTHHHHTCCCCHHHHHHHHHHH---TCEEEE-ESSCCSHHHHHHHHHHHHHTTTSEEEEEEC
T ss_pred HHHHHHHhCCCCEEEEEeecccccCCcCCHHHHHHHHHhc---CCcEEE-ECCCCCHHHHHHHHhcccccCCeEeEEEee
Confidence 456677788999877721 1 0113444444443332 333333 33333 5788888887 8 8888873
No 381
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=49.69 E-value=67 Score=30.41 Aligned_cols=95 Identities=12% Similarity=-0.069 Sum_probs=63.2
Q ss_pred CcEEEEE-Ee-cCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcC---CCCCHHH----HHHHH
Q 018508 84 ETLYGLF-LL-SFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRL---PESCPTW----AKKAL 154 (355)
Q Consensus 84 ~~~~gl~-v~-~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV---~~~~~~~----i~~aL 154 (355)
...+..| .+ ....+.++.+..+|.|.+.|-+ ...+.+.+...+..++..|..+.+=+ +..++.. ++++.
T Consensus 82 ~~~i~~l~~p~~~~~~~i~~a~~aGvd~v~I~~--~~s~~~~~~~~i~~ak~~G~~v~~~~~~a~~~~~e~~~~ia~~~~ 159 (345)
T 1nvm_A 82 HAQIATLLLPGIGSVHDLKNAYQAGARVVRVAT--HCTEADVSKQHIEYARNLGMDTVGFLMMSHMIPAEKLAEQGKLME 159 (345)
T ss_dssp SSEEEEEECBTTBCHHHHHHHHHHTCCEEEEEE--ETTCGGGGHHHHHHHHHHTCEEEEEEESTTSSCHHHHHHHHHHHH
T ss_pred CCEEEEEecCCcccHHHHHHHHhCCcCEEEEEE--eccHHHHHHHHHHHHHHCCCEEEEEEEeCCCCCHHHHHHHHHHHH
Confidence 3455555 33 3468889999999999987753 23344566777777766665432222 2223443 46677
Q ss_pred hcCCCeEeecCC---CCHHHHHHHHHHcC
Q 018508 155 DLGPQGVMFPMI---DSPEAAKEAVSYCR 180 (355)
Q Consensus 155 daGa~GImvP~V---esaeea~~vv~a~~ 180 (355)
++|++.|.++-+ .+++++.++++.++
T Consensus 160 ~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~ 188 (345)
T 1nvm_A 160 SYGATCIYMADSGGAMSMNDIRDRMRAFK 188 (345)
T ss_dssp HHTCSEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred HCCCCEEEECCCcCccCHHHHHHHHHHHH
Confidence 889999988853 56999999998875
No 382
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=49.62 E-value=1.2e+02 Score=27.91 Aligned_cols=77 Identities=19% Similarity=0.149 Sum_probs=51.5
Q ss_pred HHHHHhhhcCCcEEEEeCCCC---CCCHHHHHHHHHHHH---hCCCCeEEcCCCCCHHH----HHHHHhcCCCeEee--c
Q 018508 97 TLAEISGLAGYDFVVVDMEHG---PGGISDALACLHALA---ATGTPAILRLPESCPTW----AKKALDLGPQGVMF--P 164 (355)
Q Consensus 97 ~~~e~aa~~G~D~vilDlEh~---~~~~~~a~~~i~a~~---~~g~~~iVRV~~~~~~~----i~~aLdaGa~GImv--P 164 (355)
..++.+...|.|.+++=---| ..+.++-.++++.+. ....++++=+...+... .+.+-++|+++||+ |
T Consensus 32 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 111 (297)
T 3flu_A 32 DLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAGADYTLSVVP 111 (297)
T ss_dssp HHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEECCC
Confidence 356677789999999876655 346666556555432 34578899988877653 56788899999764 5
Q ss_pred CC--CCHHHHH
Q 018508 165 MI--DSPEAAK 173 (355)
Q Consensus 165 ~V--esaeea~ 173 (355)
.- -|.+++.
T Consensus 112 ~y~~~~~~~l~ 122 (297)
T 3flu_A 112 YYNKPSQEGIY 122 (297)
T ss_dssp CSSCCCHHHHH
T ss_pred CCCCCCHHHHH
Confidence 43 3445543
No 383
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=49.61 E-value=1.1e+02 Score=28.73 Aligned_cols=105 Identities=12% Similarity=-0.002 Sum_probs=64.1
Q ss_pred cHHHHHHHHHHhccCCcc--EEEEChhhHHhhcCCCCCCCCHHHHHHHHHHHHHHHhCCCceeecc----cCCc----hh
Q 018508 221 SEEGVKRAEDIAAVDGVD--CVQMGPLDLSASMGYLWDPGHRKVREMMRVAEKGVLGGGKAYLAGF----AMPH----DA 290 (355)
Q Consensus 221 T~~av~nieeIaavpgVD--~l~iGp~DLs~slG~~~~~~~p~v~~ai~~iv~aa~a~g~~~~g~~----~~d~----~~ 290 (355)
...+++..-+-+.--|++ .+|+..+|+-..-.+.. ...+.++.+.++++.|++.|..++-+. ..++ +.
T Consensus 79 ~~~~i~~a~~al~~ag~~~v~i~~s~Sd~~~~~~l~~--s~~e~l~~~~~~v~~a~~~g~~v~f~~~d~~~~~~~~~~~~ 156 (325)
T 3eeg_A 79 KEADINIAGEALRFAKRSRIHTGIGSSDIHIEHKLRS--TRENILEMAVAAVKQAKKVVHEVEFFCEDAGRADQAFLARM 156 (325)
T ss_dssp CHHHHHHHHHHHTTCSSEEEEEEEECSHHHHC----C--CCTTGGGTTHHHHHHHHTTSSEEEEEEETGGGSCHHHHHHH
T ss_pred CHHHHHHHHHhhcccCCCEEEEEecccHHHHHHHhCC--CHHHHHHHHHHHHHHHHHCCCEEEEEccccccchHHHHHHH
Confidence 355665443333212444 36778899876543322 234566777888899999887643221 1233 34
Q ss_pred HHHHHHCCCCEEEecchHHHHH-HHHHHHHHHHHHhcC
Q 018508 291 PLEMKSRGYHMVSGAVDVGLFR-SAAVEDVARFKMNLT 327 (355)
Q Consensus 291 a~~~~~~G~~~vs~~~D~~ll~-~~~~~~~~~~r~~~~ 327 (355)
++.+.++|.+.+++...++++. ..+.+.+..+|...+
T Consensus 157 ~~~~~~~G~~~i~l~DT~G~~~P~~v~~lv~~l~~~~~ 194 (325)
T 3eeg_A 157 VEAVIEAGADVVNIPDTTGYMLPWQYGERIKYLMDNVS 194 (325)
T ss_dssp HHHHHHHTCSEEECCBSSSCCCHHHHHHHHHHHHHHCS
T ss_pred HHHHHhcCCCEEEecCccCCcCHHHHHHHHHHHHHhCC
Confidence 6677899999999887776553 455677777777654
No 384
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=49.27 E-value=1.4e+02 Score=26.57 Aligned_cols=122 Identities=15% Similarity=0.115 Sum_probs=67.2
Q ss_pred HHHHHHhcCCCeEe-ecCCC-----C----HHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEE
Q 018508 149 WAKKALDLGPQGVM-FPMID-----S----PEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQ 218 (355)
Q Consensus 149 ~i~~aLdaGa~GIm-vP~Ve-----s----aeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~m 218 (355)
.++.+++.||+.|- +..+. . .+++++++++|.. ..+=++
T Consensus 76 e~~~Ai~~GAdevd~vinig~~~~g~~~~v~~ei~~v~~a~~~-------------------------------~~lkvI 124 (220)
T 1ub3_A 76 EAALACARGADEVDMVLHLGRAKAGDLDYLEAEVRAVREAVPQ-------------------------------AVLKVI 124 (220)
T ss_dssp HHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHSTT-------------------------------SEEEEE
T ss_pred HHHHHHHcCCCEEEecccchhhhCCCHHHHHHHHHHHHHHHcC-------------------------------CCceEE
Confidence 36789999999763 23332 2 2345566666531 133446
Q ss_pred Ec----cHHHHHHHHHHhccCCccEEEEChhhHHhhcCCCCCCCCHHHHHHHHHHHHHHHhCCCceeecccCCchhHHHH
Q 018508 219 VE----SEEGVKRAEDIAAVDGVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVAEKGVLGGGKAYLAGFAMPHDAPLEM 294 (355)
Q Consensus 219 IE----T~~av~nieeIaavpgVD~l~iGp~DLs~slG~~~~~~~p~v~~ai~~iv~aa~a~g~~~~g~~~~d~~~a~~~ 294 (355)
|| |.+-+..+-+|+.--|.|+|=-. .|.......++-.+.+.+++ .+ .-++++.||+- +.+++..+
T Consensus 125 let~~l~~e~i~~a~~ia~eaGADfVKTs-------TGf~~~gat~~dv~~m~~~v-g~-~v~VkaaGGir-t~~~al~~ 194 (220)
T 1ub3_A 125 LETGYFSPEEIARLAEAAIRGGADFLKTS-------TGFGPRGASLEDVALLVRVA-QG-RAQVKAAGGIR-DRETALRM 194 (220)
T ss_dssp CCGGGSCHHHHHHHHHHHHHHTCSEEECC-------CSSSSCCCCHHHHHHHHHHH-TT-SSEEEEESSCC-SHHHHHHH
T ss_pred EecCCCCHHHHHHHHHHHHHhCCCEEEeC-------CCCCCCCCCHHHHHHHHHhh-CC-CCeEEEECCCC-CHHHHHHH
Confidence 67 45556666666644477876443 23321112233333344433 22 24556677775 66888889
Q ss_pred HHCCCCEEEecchHHHH
Q 018508 295 KSRGYHMVSGAVDVGLF 311 (355)
Q Consensus 295 ~~~G~~~vs~~~D~~ll 311 (355)
++.|.+-+-.++=..++
T Consensus 195 i~aGa~RiG~S~g~~I~ 211 (220)
T 1ub3_A 195 LKAGASRLGTSSGVALV 211 (220)
T ss_dssp HHTTCSEEEETTHHHHH
T ss_pred HHCCCcccchhHHHHHH
Confidence 99999955444444444
No 385
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=48.61 E-value=72 Score=30.77 Aligned_cols=31 Identities=13% Similarity=0.159 Sum_probs=25.9
Q ss_pred HHHHHhcCCCeEeecC---CCCHHHHHHHHHHcC
Q 018508 150 AKKALDLGPQGVMFPM---IDSPEAAKEAVSYCR 180 (355)
Q Consensus 150 i~~aLdaGa~GImvP~---Vesaeea~~vv~a~~ 180 (355)
++++.++|++.|.+|- +-+|.++.+++++++
T Consensus 163 ~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~ 196 (370)
T 3rmj_A 163 CGAVIEAGATTINIPDTVGYSIPYKTEEFFRELI 196 (370)
T ss_dssp HHHHHHHTCCEEEEECSSSCCCHHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEecCccCCcCHHHHHHHHHHHH
Confidence 4667889999999987 468999999998875
No 386
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=48.51 E-value=1.5e+02 Score=27.06 Aligned_cols=107 Identities=13% Similarity=0.007 Sum_probs=61.0
Q ss_pred EEEEEEccHHHHHHHHHHhccCCccEEEE--ChhhHHhhcCCCCCCCCHHHHHHHHHHHHHHHhCCCceeecc-------
Q 018508 214 LIMCQVESEEGVKRAEDIAAVDGVDCVQM--GPLDLSASMGYLWDPGHRKVREMMRVAEKGVLGGGKAYLAGF------- 284 (355)
Q Consensus 214 ~vi~mIET~~av~nieeIaavpgVD~l~i--Gp~DLs~slG~~~~~~~p~v~~ai~~iv~aa~a~g~~~~g~~------- 284 (355)
.+.+++-+.++++.+-+ . |++.|.+ ..+|.-....+. ....+..+...++++.|+++|+.+.+.+
T Consensus 74 ~v~~l~~n~~~i~~a~~---~-G~~~V~i~~~~S~~h~~~~~~--~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~~~e 147 (295)
T 1ydn_A 74 RYSVLVPNMKGYEAAAA---A-HADEIAVFISASEGFSKANIN--CTIAESIERLSPVIGAAINDGLAIRGYVSCVVECP 147 (295)
T ss_dssp EEEEECSSHHHHHHHHH---T-TCSEEEEEEESCHHHHHHHTS--SCHHHHHHHHHHHHHHHHHTTCEEEEEEECSSEET
T ss_pred EEEEEeCCHHHHHHHHH---C-CCCEEEEEEecCHHHHHHHcC--CCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEecCC
Confidence 44455544444443322 2 5555444 466665544322 1245677778888999999998753221
Q ss_pred ---cCCchh----HHHHHHCCCCEEEecchHHHH-HHHHHHHHHHHHHhc
Q 018508 285 ---AMPHDA----PLEMKSRGYHMVSGAVDVGLF-RSAAVEDVARFKMNL 326 (355)
Q Consensus 285 ---~~d~~~----a~~~~~~G~~~vs~~~D~~ll-~~~~~~~~~~~r~~~ 326 (355)
..+++. ++.+.+.|.+.+++..-++++ -.-..+.+..++...
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~G~d~i~l~Dt~G~~~P~~~~~lv~~l~~~~ 197 (295)
T 1ydn_A 148 YDGPVTPQAVASVTEQLFSLGCHEVSLGDTIGRGTPDTVAAMLDAVLAIA 197 (295)
T ss_dssp TTEECCHHHHHHHHHHHHHHTCSEEEEEETTSCCCHHHHHHHHHHHHTTS
T ss_pred cCCCCCHHHHHHHHHHHHhcCCCEEEecCCCCCcCHHHHHHHHHHHHHhC
Confidence 124443 455668999999888555543 233445566666543
No 387
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=48.43 E-value=1.1e+02 Score=28.05 Aligned_cols=77 Identities=18% Similarity=0.220 Sum_probs=51.4
Q ss_pred HHHHHhhhcCCcEEEEeCCCC---CCCHHHHHHHHHHHH---hCCCCeEEcCCCCCHHH----HHHHHhcCCCeEee--c
Q 018508 97 TLAEISGLAGYDFVVVDMEHG---PGGISDALACLHALA---ATGTPAILRLPESCPTW----AKKALDLGPQGVMF--P 164 (355)
Q Consensus 97 ~~~e~aa~~G~D~vilDlEh~---~~~~~~a~~~i~a~~---~~g~~~iVRV~~~~~~~----i~~aLdaGa~GImv--P 164 (355)
..++.+...|.|.+++=---+ ..+.++-.++++.+. ....++++=+...+... .+.+-++|+++||+ |
T Consensus 26 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 105 (291)
T 3tak_A 26 KLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGTGANSTREAIELTKAAKDLGADAALLVTP 105 (291)
T ss_dssp HHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 355677788999998876655 245666666655432 34578899888877653 56788899999764 5
Q ss_pred CCC--CHHHHH
Q 018508 165 MID--SPEAAK 173 (355)
Q Consensus 165 ~Ve--saeea~ 173 (355)
.-. |.+++.
T Consensus 106 ~y~~~~~~~l~ 116 (291)
T 3tak_A 106 YYNKPTQEGLY 116 (291)
T ss_dssp CSSCCCHHHHH
T ss_pred CCCCCCHHHHH
Confidence 432 445543
No 388
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=48.32 E-value=92 Score=29.16 Aligned_cols=77 Identities=13% Similarity=0.189 Sum_probs=50.9
Q ss_pred HHHHHhhhcCCcEEEEeCCCC---CCCHHHHHHHHHHH-H--hCCCCeEEcCCCCCHHH----HHHHHhcCCCeEee--c
Q 018508 97 TLAEISGLAGYDFVVVDMEHG---PGGISDALACLHAL-A--ATGTPAILRLPESCPTW----AKKALDLGPQGVMF--P 164 (355)
Q Consensus 97 ~~~e~aa~~G~D~vilDlEh~---~~~~~~a~~~i~a~-~--~~g~~~iVRV~~~~~~~----i~~aLdaGa~GImv--P 164 (355)
..++.+...|.|.+++=---| ..+.++-.++++.+ + ....++++=+...+... .+.+-++|+++||+ |
T Consensus 48 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P 127 (314)
T 3qze_A 48 KLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGTGANSTREAVALTEAAKSGGADACLLVTP 127 (314)
T ss_dssp HHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 355667789999999864333 45666666666543 2 34578899888877643 56788899999764 5
Q ss_pred CCC--CHHHHH
Q 018508 165 MID--SPEAAK 173 (355)
Q Consensus 165 ~Ve--saeea~ 173 (355)
.-. |.+++.
T Consensus 128 ~y~~~s~~~l~ 138 (314)
T 3qze_A 128 YYNKPTQEGMY 138 (314)
T ss_dssp CSSCCCHHHHH
T ss_pred CCCCCCHHHHH
Confidence 432 445543
No 389
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=48.27 E-value=63 Score=30.22 Aligned_cols=32 Identities=6% Similarity=0.116 Sum_probs=26.2
Q ss_pred HHHHHhcCCCeEeecC---CCCHHHHHHHHHHcCC
Q 018508 150 AKKALDLGPQGVMFPM---IDSPEAAKEAVSYCRF 181 (355)
Q Consensus 150 i~~aLdaGa~GImvP~---Vesaeea~~vv~a~~~ 181 (355)
++++.++|++.|.++- +-+|+++.++++.++.
T Consensus 163 ~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~ 197 (307)
T 1ydo_A 163 SEALFEFGISELSLGDTIGAANPAQVETVLEALLA 197 (307)
T ss_dssp HHHHHHHTCSCEEEECSSCCCCHHHHHHHHHHHHT
T ss_pred HHHHHhcCCCEEEEcCCCCCcCHHHHHHHHHHHHH
Confidence 4667789999998884 5789999999999863
No 390
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=48.01 E-value=37 Score=31.93 Aligned_cols=69 Identities=12% Similarity=-0.110 Sum_probs=48.3
Q ss_pred EEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHHHhcCCCeEee
Q 018508 89 LFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMF 163 (355)
Q Consensus 89 l~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~aLdaGa~GImv 163 (355)
+-+-..+.+.++.+..+|+|.|.+|- .+.+++++.++.+. +...+.=-.+.+...+....+.|+|.|-+
T Consensus 201 IeVEv~tl~ea~eAl~aGaD~I~LDn----~~~~~l~~av~~~~--~~v~ieaSGGIt~~~i~~~a~tGVD~Isv 269 (287)
T 3tqv_A 201 VEVEVTNLDELNQAIAAKADIVMLDN----FSGEDIDIAVSIAR--GKVALEVSGNIDRNSIVAIAKTGVDFISV 269 (287)
T ss_dssp EEEEESSHHHHHHHHHTTCSEEEEES----CCHHHHHHHHHHHT--TTCEEEEESSCCTTTHHHHHTTTCSEEEC
T ss_pred EEEEeCCHHHHHHHHHcCCCEEEEcC----CCHHHHHHHHHhhc--CCceEEEECCCCHHHHHHHHHcCCCEEEE
Confidence 44566788888888899999999997 55677777666543 22222222344667788889999998875
No 391
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=47.93 E-value=34 Score=30.02 Aligned_cols=68 Identities=21% Similarity=0.082 Sum_probs=37.3
Q ss_pred EEecCCHH-HHHHhhhcCCcEEEEeCC--CCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHHHhcCCCeE
Q 018508 90 FLLSFSPT-LAEISGLAGYDFVVVDME--HGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGV 161 (355)
Q Consensus 90 ~v~~~sp~-~~e~aa~~G~D~vilDlE--h~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~aLdaGa~GI 161 (355)
.+..++|. .++.+..+|+|+|.+-.+ ... . ....++.++..|..+++=++...+....+.+..+++.|
T Consensus 74 ~l~vnd~~~~v~~~~~~Gad~v~vh~~~~~~~-~---~~~~~~~~~~~g~~ig~~~~p~t~~e~~~~~~~~~d~v 144 (230)
T 1rpx_A 74 HLMIVEPDQRVPDFIKAGADIVSVHCEQSSTI-H---LHRTINQIKSLGAKAGVVLNPGTPLTAIEYVLDAVDLV 144 (230)
T ss_dssp EEESSSHHHHHHHHHHTTCSEEEEECSTTTCS-C---HHHHHHHHHHTTSEEEEEECTTCCGGGGTTTTTTCSEE
T ss_pred EEEecCHHHHHHHHHHcCCCEEEEEecCccch-h---HHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHhhCCEE
Confidence 33445564 788889999999999988 432 2 23444444445554444443222222222223456655
No 392
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=47.93 E-value=87 Score=29.33 Aligned_cols=77 Identities=16% Similarity=-0.004 Sum_probs=51.8
Q ss_pred HHHHHhhhcCCcEEEEeCCCC---CCCHHHHHHHHHHHH---hCCCCeEEcCCCCCHHH----HHHHHhcCCCeEee--c
Q 018508 97 TLAEISGLAGYDFVVVDMEHG---PGGISDALACLHALA---ATGTPAILRLPESCPTW----AKKALDLGPQGVMF--P 164 (355)
Q Consensus 97 ~~~e~aa~~G~D~vilDlEh~---~~~~~~a~~~i~a~~---~~g~~~iVRV~~~~~~~----i~~aLdaGa~GImv--P 164 (355)
..++.+...|.|.+++=---+ ..+.++-.++++.+. ....++++=+...+... .+.+-++|+++||+ |
T Consensus 49 ~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 128 (315)
T 3na8_A 49 RSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVSDLTTAKTVRRAQFAESLGAEAVMVLPI 128 (315)
T ss_dssp HHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEECCC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 456777789999999876333 456666666665432 34578899888877643 56788899999775 4
Q ss_pred CC--CCHHHHH
Q 018508 165 MI--DSPEAAK 173 (355)
Q Consensus 165 ~V--esaeea~ 173 (355)
.- -|.+++.
T Consensus 129 ~y~~~s~~~l~ 139 (315)
T 3na8_A 129 SYWKLNEAEVF 139 (315)
T ss_dssp CSSCCCHHHHH
T ss_pred CCCCCCHHHHH
Confidence 42 2555553
No 393
>3bre_A Probable two-component response regulator; protein-nucleotide complex, signaling protein; HET: C2E; 2.40A {Pseudomonas aeruginosa} PDB: 3i5a_A*
Probab=47.68 E-value=1e+02 Score=28.09 Aligned_cols=83 Identities=11% Similarity=0.065 Sum_probs=50.1
Q ss_pred CCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHH-hCCCCeEEcCCCCCHHHHHHHHhcCCCeEeecCCCCHHHH
Q 018508 94 FSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALA-ATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAA 172 (355)
Q Consensus 94 ~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~-~~g~~~iVRV~~~~~~~i~~aLdaGa~GImvP~Vesaeea 172 (355)
+..+.++.+....+|.|++|+.-...+--++...++... ....++++=....+.....+++..|+++.+. |--+.+++
T Consensus 51 ~~~~al~~~~~~~~dlvl~D~~mp~~~G~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~a~~~Ga~~~l~-Kp~~~~~l 129 (358)
T 3bre_A 51 DPQQAVAVANQIKPTVILQDLVMPGVDGLTLLAAYRGNPATRDIPIIVLSTKEEPTVKSAAFAAGANDYLV-KLPDAIEL 129 (358)
T ss_dssp CHHHHHHHHHHHCCSEEEEESBCSSSBHHHHHHHHTTSTTTTTSCEEEEESSCCHHHHHHHHHTTCSEEEE-SCCCHHHH
T ss_pred CHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHhcCcccCCCcEEEEeCCCCHHHHHHHHhcChheEee-ccCCHHHH
Confidence 334566777777899999999865444333323332211 1234455544445667788899999988654 43366666
Q ss_pred HHHHH
Q 018508 173 KEAVS 177 (355)
Q Consensus 173 ~~vv~ 177 (355)
...+.
T Consensus 130 ~~~v~ 134 (358)
T 3bre_A 130 VARIR 134 (358)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55444
No 394
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=47.57 E-value=1.5e+02 Score=28.31 Aligned_cols=68 Identities=18% Similarity=0.056 Sum_probs=41.3
Q ss_pred HHHHhhhcCCcEEEEeCCCC--------CC----------CHH----HHHHHHHHHHh-CC-CCeEEcCCCCC-------
Q 018508 98 LAEISGLAGYDFVVVDMEHG--------PG----------GIS----DALACLHALAA-TG-TPAILRLPESC------- 146 (355)
Q Consensus 98 ~~e~aa~~G~D~vilDlEh~--------~~----------~~~----~a~~~i~a~~~-~g-~~~iVRV~~~~------- 146 (355)
.++.+..+|||.|=|.+-|+ |. +.+ -+.+++++++. .| .++.||++..+
T Consensus 166 aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~pv~vris~~~~~~~~~~ 245 (365)
T 2gou_A 166 AALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIGAERVGVRLAPLTTLNGTVD 245 (365)
T ss_dssp HHHHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECSSCCTTSCCC
T ss_pred HHHHHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHcCCCcEEEEEccccccCCCCC
Confidence 34556789999999998774 21 111 23345555542 22 28899987632
Q ss_pred --H-H----HHHHHHhcCCCeEeecC
Q 018508 147 --P-T----WAKKALDLGPQGVMFPM 165 (355)
Q Consensus 147 --~-~----~i~~aLdaGa~GImvP~ 165 (355)
+ . .++.+.+.|++.|-+.-
T Consensus 246 ~~~~~~~~~~a~~l~~~G~d~i~v~~ 271 (365)
T 2gou_A 246 ADPILTYTAAAALLNKHRIVYLHIAE 271 (365)
T ss_dssp SSHHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeC
Confidence 1 1 14556678999887753
No 395
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=47.54 E-value=1.4e+02 Score=27.47 Aligned_cols=106 Identities=11% Similarity=0.028 Sum_probs=63.1
Q ss_pred eEEEEEEccHHHHHHHHHHhccCCccEE--EEChhhHHh--hcCCCCCCCCHHHHHHHHHHHHHHHhCCCceeecc---c
Q 018508 213 LLIMCQVESEEGVKRAEDIAAVDGVDCV--QMGPLDLSA--SMGYLWDPGHRKVREMMRVAEKGVLGGGKAYLAGF---A 285 (355)
Q Consensus 213 i~vi~mIET~~av~nieeIaavpgVD~l--~iGp~DLs~--slG~~~~~~~p~v~~ai~~iv~aa~a~g~~~~g~~---~ 285 (355)
+.+.+++.+.+.++.+-+ + |++.| +++.+|+-. -++.+ ..+.++...++++.|+++|+.+.+.+ +
T Consensus 77 ~~~~~l~~~~~~i~~a~~--a--G~~~v~i~~~~s~~~~~~~~~~s----~ee~l~~~~~~v~~a~~~G~~V~~~l~~~~ 148 (302)
T 2ftp_A 77 VTYAALAPNLKGFEAALE--S--GVKEVAVFAAASEAFSQRNINCS----IKDSLERFVPVLEAARQHQVRVRGYISCVL 148 (302)
T ss_dssp SEEEEECCSHHHHHHHHH--T--TCCEEEEEEESCHHHHHHHHSSC----HHHHHHHHHHHHHHHHHTTCEEEEEEECTT
T ss_pred CEEEEEeCCHHHHHHHHh--C--CcCEEEEEEecCHHHHHHHhCCC----HHHHHHHHHHHHHHHHHCCCeEEEEEEEEe
Confidence 344555556665554433 2 56654 456668643 34442 46778888899999999998753221 1
Q ss_pred -------CCchh----HHHHHHCCCCEEEecchHHHH-HHHHHHHHHHHHHhc
Q 018508 286 -------MPHDA----PLEMKSRGYHMVSGAVDVGLF-RSAAVEDVARFKMNL 326 (355)
Q Consensus 286 -------~d~~~----a~~~~~~G~~~vs~~~D~~ll-~~~~~~~~~~~r~~~ 326 (355)
.+++. ++.+.+.|.+.+++...++++ =.-..+.++.++...
T Consensus 149 ~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~DT~G~~~P~~~~~lv~~l~~~~ 201 (302)
T 2ftp_A 149 GCPYDGDVDPRQVAWVARELQQMGCYEVSLGDTIGVGTAGATRRLIEAVASEV 201 (302)
T ss_dssp CBTTTBCCCHHHHHHHHHHHHHTTCSEEEEEESSSCCCHHHHHHHHHHHTTTS
T ss_pred eCCcCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCCcCHHHHHHHHHHHHHhC
Confidence 23443 445568999999888555443 233345555665543
No 396
>1a2o_A CHEB methylesterase; bacterial chemotaxis, adaptation, serine hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.23.1.1 c.40.1.1
Probab=47.46 E-value=1.8e+02 Score=27.25 Aligned_cols=88 Identities=15% Similarity=0.119 Sum_probs=48.9
Q ss_pred hHHHHHHHcCCcEEEEEEecCC-HHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCH---HH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFS-PTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCP---TW 149 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~s-p~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~---~~ 149 (355)
..+++.|..- +-+-......+ .+..+.+....+|.|++|++-...+--++.+.++. ....++++ +..... ..
T Consensus 17 ~~L~~~L~~~-~g~~vv~~a~~~~eAl~~l~~~~pDlVllDi~mp~~dGlell~~l~~--~~p~pVIv-lS~~~~~~~~~ 92 (349)
T 1a2o_A 17 QIMTEIINSH-SDMEMVATAPDPLVARDLIKKFNPDVLTLDVEMPRMDGLDFLEKLMR--LRPMPVVM-VSSLTGKGSEV 92 (349)
T ss_dssp HHHHHHHHTS-TTEEEEEEESSHHHHHHHHHHHCCSEEEEECCCSSSCHHHHHHHHHH--SSCCCEEE-EECCTHHHHHH
T ss_pred HHHHHHHhcC-CCcEEEEEeCCHHHHHHHHhccCCCEEEEECCCCCCCHHHHHHHHHh--cCCCcEEE-EECCCcccHHH
Confidence 4466667642 11221112334 44567777778999999998765443333333332 23344433 333332 34
Q ss_pred HHHHHhcCCCeEe-ecC
Q 018508 150 AKKALDLGPQGVM-FPM 165 (355)
Q Consensus 150 i~~aLdaGa~GIm-vP~ 165 (355)
..++++.|+.+++ -|.
T Consensus 93 ~~~al~~Ga~d~l~KP~ 109 (349)
T 1a2o_A 93 TLRALELGAIDFVTKPQ 109 (349)
T ss_dssp HHHHHHHTCCEEEECSS
T ss_pred HHHHHhCCceEEEECCC
Confidence 7789999998755 443
No 397
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=47.46 E-value=69 Score=30.27 Aligned_cols=31 Identities=19% Similarity=0.232 Sum_probs=23.9
Q ss_pred HHHHHhcCCCeEeecC---CCCHHHHHHHHHHcC
Q 018508 150 AKKALDLGPQGVMFPM---IDSPEAAKEAVSYCR 180 (355)
Q Consensus 150 i~~aLdaGa~GImvP~---Vesaeea~~vv~a~~ 180 (355)
++++.++|++.|.++- +-+|+++.++++.++
T Consensus 157 ~~~~~~~G~~~i~l~DT~G~~~P~~v~~lv~~l~ 190 (325)
T 3eeg_A 157 VEAVIEAGADVVNIPDTTGYMLPWQYGERIKYLM 190 (325)
T ss_dssp HHHHHHHTCSEEECCBSSSCCCHHHHHHHHHHHH
T ss_pred HHHHHhcCCCEEEecCccCCcCHHHHHHHHHHHH
Confidence 4556778888888876 468899999988875
No 398
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=47.28 E-value=57 Score=29.69 Aligned_cols=83 Identities=8% Similarity=-0.015 Sum_probs=51.8
Q ss_pred CCHHHHHHhhhcC----CcEEEEeCCCCCCCHHHHHHHHHHHH-hC-CCCeEEcCCCCCHHHHHHHHhcCCCeEeecC--
Q 018508 94 FSPTLAEISGLAG----YDFVVVDMEHGPGGISDALACLHALA-AT-GTPAILRLPESCPTWAKKALDLGPQGVMFPM-- 165 (355)
Q Consensus 94 ~sp~~~e~aa~~G----~D~vilDlEh~~~~~~~a~~~i~a~~-~~-g~~~iVRV~~~~~~~i~~aLdaGa~GImvP~-- 165 (355)
.+|+.+...+..| ..||.++- -+... ..++++.+. .. ..+++|=-.=.++++++++++ ||++|++=-
T Consensus 139 ~~~~~~~~~a~~g~~~~~~~VYl~s-~G~~~---~~~~i~~i~~~~~~~Pv~vGgGI~t~e~a~~~~~-gAd~VIVGSa~ 213 (240)
T 1viz_A 139 LNMDDIVAYARVSELLQLPIFYLEY-SGVLG---DIEAVKKTKAVLETSTLFYGGGIKDAETAKQYAE-HADVIVVGNAV 213 (240)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEEC-TTSCC---CHHHHHHHHHTCSSSEEEEESSCCSHHHHHHHHT-TCSEEEECTHH
T ss_pred CCHHHHHHHHHhCcccCCCEEEEeC-CCccC---hHHHHHHHHHhcCCCCEEEEeccCCHHHHHHHHh-CCCEEEEChHH
Confidence 3467777776555 48888887 44322 223344333 33 556666555557889999999 999999743
Q ss_pred CCCHH-HHHHHHHHcCCC
Q 018508 166 IDSPE-AAKEAVSYCRFP 182 (355)
Q Consensus 166 Vesae-ea~~vv~a~~~p 182 (355)
++.++ -+++ +++.+-.
T Consensus 214 v~~~~~~~~~-v~~~~~~ 230 (240)
T 1viz_A 214 YEDFDRALKT-VAAVKGE 230 (240)
T ss_dssp HHCHHHHHTH-HHHHHCC
T ss_pred HhCHHHHHHH-HHHHHhc
Confidence 45666 4455 6566543
No 399
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=47.15 E-value=2e+02 Score=27.53 Aligned_cols=69 Identities=20% Similarity=0.076 Sum_probs=42.7
Q ss_pred HHHHHhhhcCCcEEEEeCCCC--------CC----------CHH----HHHHHHHHHHh-CC-CCeEEcCCCCC------
Q 018508 97 TLAEISGLAGYDFVVVDMEHG--------PG----------GIS----DALACLHALAA-TG-TPAILRLPESC------ 146 (355)
Q Consensus 97 ~~~e~aa~~G~D~vilDlEh~--------~~----------~~~----~a~~~i~a~~~-~g-~~~iVRV~~~~------ 146 (355)
..++.+..+|||.|=|..-|+ |. +.+ -+.+++++++. .| .++.||++..+
T Consensus 165 ~AA~~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~vg~~~v~vRls~~~~~~g~~ 244 (361)
T 3gka_A 165 RGAENARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVWSAARVGVHLAPRGDAHTMG 244 (361)
T ss_dssp HHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHHCGGGEEEEECTTCCSSSCC
T ss_pred HHHHHHHHcCCCEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHcCCCeEEEecccccccCCCC
Confidence 345667789999999999994 21 111 22345555542 22 27899998642
Q ss_pred ---H-H----HHHHHHhcCCCeEeecC
Q 018508 147 ---P-T----WAKKALDLGPQGVMFPM 165 (355)
Q Consensus 147 ---~-~----~i~~aLdaGa~GImvP~ 165 (355)
+ . .++.+-++|++.|-+.-
T Consensus 245 ~~~~~~~~~~la~~l~~~Gvd~i~v~~ 271 (361)
T 3gka_A 245 DSDPAATFGHVARELGRRRIAFLFARE 271 (361)
T ss_dssp CSCHHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCCcHHHHHHHHHHHHHcCCCEEEECC
Confidence 1 1 23455568998877653
No 400
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=47.11 E-value=48 Score=30.58 Aligned_cols=73 Identities=15% Similarity=-0.032 Sum_probs=45.6
Q ss_pred eEEEEEEccHHHHHHHHHHhccCCccEEEEChhhHHhhcCCCCCCCCHHHHHHHHHHHHHHHhC--CCc--eeecccCCc
Q 018508 213 LLIMCQVESEEGVKRAEDIAAVDGVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVAEKGVLGG--GKA--YLAGFAMPH 288 (355)
Q Consensus 213 i~vi~mIET~~av~nieeIaavpgVD~l~iGp~DLs~slG~~~~~~~p~v~~ai~~iv~aa~a~--g~~--~~g~~~~d~ 288 (355)
..+++-++|.+-+.. -+. .|+|+|.+++.+ |+. ++++++..+.. +.+ ..|++ ++
T Consensus 183 ~~i~vev~tlee~~~---A~~-aGaD~I~ld~~~-------------~~~---l~~~v~~l~~~~~~~~i~AsGGI--~~ 240 (273)
T 2b7n_A 183 AKIEIECESFEEAKN---AMN-AGADIVMCDNLS-------------VLE---TKEIAAYRDAHYPFVLLEASGNI--SL 240 (273)
T ss_dssp CCEEEEESSHHHHHH---HHH-HTCSEEEEETCC-------------HHH---HHHHHHHHHHHCTTCEEEEESSC--CT
T ss_pred ceEEEEcCCHHHHHH---HHH-cCCCEEEECCCC-------------HHH---HHHHHHHhhccCCCcEEEEECCC--CH
Confidence 467778888854333 222 289999998632 322 22333333321 122 45655 77
Q ss_pred hhHHHHHHCCCCEEEecch
Q 018508 289 DAPLEMKSRGYHMVSGAVD 307 (355)
Q Consensus 289 ~~a~~~~~~G~~~vs~~~D 307 (355)
+.++.+++.|.+.+++|+-
T Consensus 241 ~ni~~~~~aGaD~i~vGs~ 259 (273)
T 2b7n_A 241 ESINAYAKSGVDAISVGAL 259 (273)
T ss_dssp TTHHHHHTTTCSEEECTHH
T ss_pred HHHHHHHHcCCcEEEEcHH
Confidence 8899999999999999864
No 401
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=46.92 E-value=34 Score=33.06 Aligned_cols=66 Identities=23% Similarity=0.206 Sum_probs=41.7
Q ss_pred cCCHHHHHHhhhcCCcEEEEeCCCCC-------CCHHHHHHHHHHHHhCCCCeEEcCCCC-CHHHHHHHHhcCCCeEee
Q 018508 93 SFSPTLAEISGLAGYDFVVVDMEHGP-------GGISDALACLHALAATGTPAILRLPES-CPTWAKKALDLGPQGVMF 163 (355)
Q Consensus 93 ~~sp~~~e~aa~~G~D~vilDlEh~~-------~~~~~a~~~i~a~~~~g~~~iVRV~~~-~~~~i~~aLdaGa~GImv 163 (355)
..+++.++.+..+|+|.|++- .|+. .+.+.+.++..++ +. +++=..+. +...+.++|.+||++|++
T Consensus 233 v~t~e~a~~a~~aGad~I~vs-~~gg~~~d~~~~~~~~l~~v~~~~---~~-pVia~GGI~~~~dv~kal~~GAdaV~i 306 (380)
T 1p4c_A 233 LLSAEDADRCIAEGADGVILS-NHGGRQLDCAISPMEVLAQSVAKT---GK-PVLIDSGFRRGSDIVKALALGAEAVLL 306 (380)
T ss_dssp ECCHHHHHHHHHTTCSEEEEC-CGGGTSCTTCCCGGGTHHHHHHHH---CS-CEEECSSCCSHHHHHHHHHTTCSCEEE
T ss_pred cCcHHHHHHHHHcCCCEEEEc-CCCCCcCCCCcCHHHHHHHHHHHc---CC-eEEEECCCCCHHHHHHHHHhCCcHhhe
Confidence 368999999999999999993 2331 2222222222222 22 34333443 356788888899999887
No 402
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=46.89 E-value=1.8e+02 Score=26.89 Aligned_cols=87 Identities=7% Similarity=-0.046 Sum_probs=59.1
Q ss_pred EEEEChhhHHhhcCCCCCCCCHHHHHHHHHHHHHHHhCCCceeeccc----CCc----hhHHHHHHCCCCEEEecchHHH
Q 018508 239 CVQMGPLDLSASMGYLWDPGHRKVREMMRVAEKGVLGGGKAYLAGFA----MPH----DAPLEMKSRGYHMVSGAVDVGL 310 (355)
Q Consensus 239 ~l~iGp~DLs~slG~~~~~~~p~v~~ai~~iv~aa~a~g~~~~g~~~----~d~----~~a~~~~~~G~~~vs~~~D~~l 310 (355)
.+|+..+|+-....+. ....+.++.+.++++.|++.|..+..... .++ +.++.+.++|.+.+++...+++
T Consensus 98 ~i~~~~Sd~~~~~nl~--~s~~e~l~~~~~~v~~a~~~g~~v~~~~~d~~~~~~~~~~~~~~~~~~~G~~~i~l~DT~G~ 175 (293)
T 3ewb_X 98 HIFLATSDVHMEYKLK--MSRAEVLASIKHHISYARQKFDVVQFSPEDATRSDRAFLIEAVQTAIDAGATVINIPDTVGY 175 (293)
T ss_dssp EEEEECSHHHHHHTTC--CCHHHHHHHHHHHHHHHHTTCSCEEEEEETGGGSCHHHHHHHHHHHHHTTCCEEEEECSSSC
T ss_pred EEEecCcHHHHHHHhC--CCHHHHHHHHHHHHHHHHhCCCEEEEEeccCCCCCHHHHHHHHHHHHHcCCCEEEecCCCCC
Confidence 3778899987654432 23567888889999999998877543321 233 3466788999999988876654
Q ss_pred H-HHHHHHHHHHHHHhcC
Q 018508 311 F-RSAAVEDVARFKMNLT 327 (355)
Q Consensus 311 l-~~~~~~~~~~~r~~~~ 327 (355)
+ -....+.+..+|...+
T Consensus 176 ~~P~~v~~lv~~l~~~~~ 193 (293)
T 3ewb_X 176 TNPTEFGQLFQDLRREIK 193 (293)
T ss_dssp CCHHHHHHHHHHHHHHCT
T ss_pred CCHHHHHHHHHHHHHhcC
Confidence 3 3344566666766554
No 403
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=46.53 E-value=1.2e+02 Score=28.50 Aligned_cols=87 Identities=16% Similarity=0.135 Sum_probs=57.6
Q ss_pred EEEEEecCCH-------------HHHHHhhhcCCcEEEEeCCCC---CCCHHHHHHHHHHHH---hCCCCeEEcCCCCCH
Q 018508 87 YGLFLLSFSP-------------TLAEISGLAGYDFVVVDMEHG---PGGISDALACLHALA---ATGTPAILRLPESCP 147 (355)
Q Consensus 87 ~gl~v~~~sp-------------~~~e~aa~~G~D~vilDlEh~---~~~~~~a~~~i~a~~---~~g~~~iVRV~~~~~ 147 (355)
-|+|++...| ..++.+...|.|.+++=---| ..+.++-.++++.+. ..+.++++=+...+.
T Consensus 24 ~Gv~~alvTPf~~dg~iD~~~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st 103 (315)
T 3si9_A 24 KGAVTALITPFDDNGAIDEKAFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGAGSNST 103 (315)
T ss_dssp CEEEEECCCCBCTTSCBCHHHHHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSH
T ss_pred CceeEeeECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCH
Confidence 3777765433 356677789999999776555 345666555555432 346788999988776
Q ss_pred HH----HHHHHhcCCCeEee--cCCC--CHHHHH
Q 018508 148 TW----AKKALDLGPQGVMF--PMID--SPEAAK 173 (355)
Q Consensus 148 ~~----i~~aLdaGa~GImv--P~Ve--saeea~ 173 (355)
.. .+.+-++|+++||+ |.-. |.+++.
T Consensus 104 ~~ai~la~~A~~~Gadavlv~~P~y~~~~~~~l~ 137 (315)
T 3si9_A 104 SEAVELAKHAEKAGADAVLVVTPYYNRPNQRGLY 137 (315)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHH
T ss_pred HHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHH
Confidence 53 56788899999764 4432 445543
No 404
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=46.51 E-value=86 Score=31.87 Aligned_cols=105 Identities=14% Similarity=0.091 Sum_probs=63.9
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcC---CcEEEEeCCCC----------CCCHHHHHHHHHHHHhC--CCCe
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISGLAG---YDFVVVDMEHG----------PGGISDALACLHALAAT--GTPA 138 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G---~D~vilDlEh~----------~~~~~~a~~~i~a~~~~--g~~~ 138 (355)
..+|+.+. .+..+|.-+ .+++.+..+...| +|||.+--=.. +...+..+++...+... ...|
T Consensus 99 ~~ar~~lg-~~~iiG~S~--ht~eea~~A~~~G~~~aDYv~~Gpvf~T~tK~~~~~~~~G~~~l~~i~~~~~~~~~~~iP 175 (540)
T 3nl6_A 99 PMIRKLVG-PDMVIGWSV--GFPEEVDELSKMGPDMVDYIGVGTLFPTLTKKNPKKAPMGTAGAIRVLDALERNNAHWCR 175 (540)
T ss_dssp HHHHHHHC-TTSEEEEEE--CSHHHHHHHHHTCC--CCEEEESCCSCCCCCC----CCCHHHHHHHHHHHHHHTTCTTCE
T ss_pred HHHHHHhC-CCCEEEEEC--CCHHHHHHHHHcCCCCCCEEEEcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHhhccCCCC
Confidence 34555543 345667665 5788889999999 99999832211 12233344444443322 2457
Q ss_pred EEcCCCCCHHHHHHHHh--------cCCCeEeec----CCCCHHH-HHHHHHHcCC
Q 018508 139 ILRLPESCPTWAKKALD--------LGPQGVMFP----MIDSPEA-AKEAVSYCRF 181 (355)
Q Consensus 139 iVRV~~~~~~~i~~aLd--------aGa~GImvP----~Vesaee-a~~vv~a~~~ 181 (355)
+|=+.+.++..+.+++. .|++||.+= .-+++++ ++++.+.++.
T Consensus 176 vvAIGGI~~~ni~~v~~~~~~~g~~~GadgvAVvsaI~~a~dp~~a~~~l~~~~~~ 231 (540)
T 3nl6_A 176 TVGIGGLHPDNIERVLYQCVSSNGKRSLDGICVVSDIIASLDAAKSTKILRGLIDK 231 (540)
T ss_dssp EEEESSCCTTTHHHHHHHCBCTTSSCBCSCEEESHHHHTCTTHHHHHHHHHHHHHC
T ss_pred EEEEcCCCHHHHHHHHHhhcccccccCceEEEEeHHHhcCCCHHHHHHHHHHHHHh
Confidence 77788888888888887 789987641 2234443 4555555544
No 405
>1ny5_A Transcriptional regulator (NTRC family); AAA+ ATPase, sigma54 activator, bacterial transcription, DIM transcription; HET: ADP; 2.40A {Aquifex aeolicus} SCOP: c.23.1.1 c.37.1.20 PDB: 1ny6_A* 3m0e_A* 1zy2_A*
Probab=46.34 E-value=1.4e+02 Score=28.40 Aligned_cols=101 Identities=11% Similarity=-0.003 Sum_probs=58.3
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKA 153 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~a 153 (355)
..+++.|......+ ..-.+..+..+.+....+|.|++|+.-...+--++...++.. ....++++=....+......+
T Consensus 14 ~~l~~~L~~~g~~v--~~a~~~~eal~~l~~~~~DlvllD~~mp~~dG~ell~~lr~~-~~~~pvIvlT~~~~~~~~~~a 90 (387)
T 1ny5_A 14 GLLEEYLSMKGIKV--ESAERGKEAYKLLSEKHFNVVLLDLLLPDVNGLEILKWIKER-SPETEVIVITGHGTIKTAVEA 90 (387)
T ss_dssp HHHHHHHHHHTCEE--EEESSHHHHHHHHHHSCCSEEEEESBCSSSBHHHHHHHHHHH-CTTSEEEEEEETTCHHHHHHH
T ss_pred HHHHHHHHHCCCEE--EEECCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhh-CCCCcEEEEeCCCCHHHHHHH
Confidence 34566665422222 222333445667777789999999987544433333334331 223444544445566778899
Q ss_pred HhcCCCeEeecCCCCHHHHHHHHHH
Q 018508 154 LDLGPQGVMFPMIDSPEAAKEAVSY 178 (355)
Q Consensus 154 LdaGa~GImvP~Vesaeea~~vv~a 178 (355)
+..|+++.+. |=-+.+++...++.
T Consensus 91 ~~~Ga~dyl~-KP~~~~~L~~~i~~ 114 (387)
T 1ny5_A 91 MKMGAYDFLT-KPCMLEEIELTINK 114 (387)
T ss_dssp HTTTCCEEEE-ESCCHHHHHHHHHH
T ss_pred HhcCceEEec-CCCCHHHHHHHHHH
Confidence 9999987643 33367777655543
No 406
>1dc7_A NTRC, nitrogen regulation protein; receiver domain, phosphorylation, signal transduction, conformational rearrangement; NMR {Salmonella typhimurium} SCOP: c.23.1.1 PDB: 1j56_A 1krw_A 1krx_A 1ntr_A 1dc8_A*
Probab=46.15 E-value=10 Score=28.44 Aligned_cols=100 Identities=17% Similarity=0.072 Sum_probs=54.9
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHH--hCCCCeEEcCCCCCHHHHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALA--ATGTPAILRLPESCPTWAK 151 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~--~~g~~~iVRV~~~~~~~i~ 151 (355)
..+++.|......+. .-.+.....+.+....+|.+++|+.-.. ....+.++.++ ....++++=....+.....
T Consensus 17 ~~l~~~l~~~~~~v~--~~~~~~~~~~~~~~~~~dlvi~d~~~~~---~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~ 91 (124)
T 1dc7_A 17 WVLERALAGAGLTCT--TFENGNEVLAALASKTPDVLLSDIRMPG---MDGLALLKQIKQRHPMLPVIIMTAHSDLDAAV 91 (124)
T ss_dssp HHHHHHHTTTTCCCE--ECCCTTHHHHHSSSCCCSCEEECSCSSH---HHHCSTHHHHHHHCTTSCCCCBCCSTTSTTTT
T ss_pred HHHHHHHHhCCcEEE--EeCCHHHHHHHHhcCCCCEEEEeeecCC---CCHHHHHHHHHhhCCCCCEEEEecCCCHHHHH
Confidence 456777764332222 2223344556666677999999998642 11112233322 1233333333333444566
Q ss_pred HHHhcCCCeEeecCCCCHHHHHHHHHHc
Q 018508 152 KALDLGPQGVMFPMIDSPEAAKEAVSYC 179 (355)
Q Consensus 152 ~aLdaGa~GImvP~Vesaeea~~vv~a~ 179 (355)
++++.|+++++ ++--+.+++...++.+
T Consensus 92 ~~~~~g~~~~l-~kp~~~~~l~~~i~~~ 118 (124)
T 1dc7_A 92 SAYQQGAFDYL-PKPFDIDEAVALVERA 118 (124)
T ss_dssp SSCTTCCCCCB-CSSCCHHHHHHHHHHH
T ss_pred HHHhcCcceEe-eCCCCHHHHHHHHHHH
Confidence 78889998864 4445778877666544
No 407
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=45.72 E-value=93 Score=26.66 Aligned_cols=91 Identities=10% Similarity=-0.061 Sum_probs=48.2
Q ss_pred CchHHHHHHHcCCcEEEEEEecCCHH-HHHHhhhcCCcEEEEeCCCCC-----CCH---HHHHHHHHHHHhCC-CCeEEc
Q 018508 72 SPESLKYRLQSNETLYGLFLLSFSPT-LAEISGLAGYDFVVVDMEHGP-----GGI---SDALACLHALAATG-TPAILR 141 (355)
Q Consensus 72 ~~n~lk~~L~~G~~~~gl~v~~~sp~-~~e~aa~~G~D~vilDlEh~~-----~~~---~~a~~~i~a~~~~g-~~~iVR 141 (355)
.+..+.+.++.-...++.-+...++. .++.. ..++|+|+++.-+.. ... +..+.+-+.....+ ..+++=
T Consensus 97 ~~~~~~~~~~~~g~~i~~~~~~~t~~e~~~~~-~~~~d~vl~~~~~~g~~g~~~~~~~~~~i~~~~~~~~~~~~~~~i~v 175 (220)
T 2fli_A 97 HIHGALQKIKAAGMKAGVVINPGTPATALEPL-LDLVDQVLIMTVNPGFGGQAFIPECLEKVATVAKWRDEKGLSFDIEV 175 (220)
T ss_dssp CHHHHHHHHHHTTSEEEEEECTTSCGGGGGGG-TTTCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHHHHTTCCCEEEE
T ss_pred cHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHH-HhhCCEEEEEEECCCCcccccCHHHHHHHHHHHHHHHhcCCCceEEE
Confidence 34455566654334466666444333 33333 356999998876532 121 11221111111121 234433
Q ss_pred CCCCCHHHHHHHHhcCCCeEee
Q 018508 142 LPESCPTWAKKALDLGPQGVMF 163 (355)
Q Consensus 142 V~~~~~~~i~~aLdaGa~GImv 163 (355)
..+.++..+..++++|++||++
T Consensus 176 ~GGI~~~~~~~~~~~Gad~vvv 197 (220)
T 2fli_A 176 DGGVDNKTIRACYEAGANVFVA 197 (220)
T ss_dssp ESSCCTTTHHHHHHHTCCEEEE
T ss_pred ECcCCHHHHHHHHHcCCCEEEE
Confidence 5666667788888899999876
No 408
>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}
Probab=45.69 E-value=1.6e+02 Score=26.14 Aligned_cols=71 Identities=14% Similarity=0.094 Sum_probs=46.4
Q ss_pred HHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHHHhcCCCeEeecCCCCHHHHHHHH
Q 018508 97 TLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAV 176 (355)
Q Consensus 97 ~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~aLdaGa~GImvP~Vesaeea~~vv 176 (355)
...+.+...|++++-++... .+. ..++.+...|..++|=.. .++..++++++.|++||+- +.++.+++++
T Consensus 178 ~~~~~~~~~~~~~i~~~~~~--~~~----~~v~~~~~~G~~v~~WTv-n~~~~~~~l~~~GVdgIiT---D~P~~~~~~l 247 (252)
T 3qvq_A 178 AWQERLEHLDCAGLHIHQSF--FDV----QQVSDIKAAGYKVLAFTI-NDESLALKLYNQGLDAVFS---DYPQKIQSAI 247 (252)
T ss_dssp THHHHHHHHTCSEEEEEGGG--CCH----HHHHHHHHTTCEEEEECC-CCHHHHHHHHHTTCCEEEE---SSHHHHHHHH
T ss_pred hHHHHHHHcCCeEEecchhh--CCH----HHHHHHHHCCCEEEEEcC-CCHHHHHHHHHcCCCEEEe---CCHHHHHHHH
Confidence 34455556677776665432 222 345556667777666543 3578899999999999985 7777777665
Q ss_pred H
Q 018508 177 S 177 (355)
Q Consensus 177 ~ 177 (355)
+
T Consensus 248 ~ 248 (252)
T 3qvq_A 248 D 248 (252)
T ss_dssp H
T ss_pred H
Confidence 4
No 409
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=45.66 E-value=70 Score=30.22 Aligned_cols=74 Identities=14% Similarity=0.172 Sum_probs=41.2
Q ss_pred HHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCe---EEcC-CCCCHH----------------HHHHHHhcCC
Q 018508 99 AEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPA---ILRL-PESCPT----------------WAKKALDLGP 158 (355)
Q Consensus 99 ~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~---iVRV-~~~~~~----------------~i~~aLdaGa 158 (355)
++.++..|+|++.+ |+....+.++..+.++...+..+ .|=+ .+.+.. ..+.+.++|.
T Consensus 96 v~~~a~lGaD~vTV---Ha~~G~~~m~aa~e~a~~~~~~~~llaVtvLTS~s~~~l~~l~~~~~~e~V~~lA~~a~~~G~ 172 (303)
T 3ru6_A 96 CEEVSKLGVDMINI---HASAGKIAIQEVMTRLSKFSKRPLVLAVSALTSFDEENFFSIYRQKIEEAVINFSKISYENGL 172 (303)
T ss_dssp HHHHHTTTCSEEEE---EGGGCHHHHHHHHHHHTTSSSCCEEEEECSCTTCCHHHHHHHHSSCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHhcCCCEEEE---eccCCHHHHHHHHHHHHhcCCCceEEEEEEecCCCHHHHHHHHcCCHHHHHHHHHHHHHHcCC
Confidence 35566789999998 55445566666666655444321 1211 122211 1233557899
Q ss_pred CeEeecCCCCHHHHHHHHHHc
Q 018508 159 QGVMFPMIDSPEAAKEAVSYC 179 (355)
Q Consensus 159 ~GImvP~Vesaeea~~vv~a~ 179 (355)
+||+.+. .|++.+.+.+
T Consensus 173 dGvV~s~----~E~~~IR~~~ 189 (303)
T 3ru6_A 173 DGMVCSV----FESKKIKEHT 189 (303)
T ss_dssp SEEECCT----TTHHHHHHHS
T ss_pred CEEEECH----HHHHHHHHhC
Confidence 9988844 4455555544
No 410
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=45.45 E-value=43 Score=29.49 Aligned_cols=90 Identities=16% Similarity=0.016 Sum_probs=50.6
Q ss_pred hHHHHHHHcCCcEEEEEEecCCH-HHHHHhhhc--CCcEEEEeCCCCCCCH----HHHHHHHHHHH-hCCCCeEEcCCCC
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSP-TLAEISGLA--GYDFVVVDMEHGPGGI----SDALACLHALA-ATGTPAILRLPES 145 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp-~~~e~aa~~--G~D~vilDlEh~~~~~----~~a~~~i~a~~-~~g~~~iVRV~~~ 145 (355)
..+.++++.-...+|+-++..++ +.++..... +.|+|.++-=+...+. ....+.++.++ ..+..+++=..+.
T Consensus 103 ~~~~~~i~~~g~~igv~~~p~t~~e~~~~~~~~~~~~d~vl~~sv~pg~~g~~~~~~~l~~i~~~~~~~~~~pi~v~GGI 182 (228)
T 1h1y_A 103 QELIQSIKAKGMRPGVSLRPGTPVEEVFPLVEAENPVELVLVMTVEPGFGGQKFMPEMMEKVRALRKKYPSLDIEVDGGL 182 (228)
T ss_dssp HHHHHHHHHTTCEEEEEECTTSCGGGGHHHHHSSSCCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHCTTSEEEEESSC
T ss_pred HHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEeecCCCCcccCCHHHHHHHHHHHHhcCCCCEEEECCc
Confidence 34445554434556666644444 445555554 8999999876642111 11222233332 2223344445666
Q ss_pred CHHHHHHHHhcCCCeEee
Q 018508 146 CPTWAKKALDLGPQGVMF 163 (355)
Q Consensus 146 ~~~~i~~aLdaGa~GImv 163 (355)
++..+..++.+|+++|++
T Consensus 183 ~~~ni~~~~~aGaD~vvv 200 (228)
T 1h1y_A 183 GPSTIDVAASAGANCIVA 200 (228)
T ss_dssp STTTHHHHHHHTCCEEEE
T ss_pred CHHHHHHHHHcCCCEEEE
Confidence 677788888999999776
No 411
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=45.44 E-value=1.1e+02 Score=26.77 Aligned_cols=65 Identities=15% Similarity=0.117 Sum_probs=41.0
Q ss_pred HHHHHHhhhcCCcEEEE-eCC-CC---CCCHHHHHHHHHHHHhCCCCeEEcCCCCC-HHHHHHHHhcCCCeEeec
Q 018508 96 PTLAEISGLAGYDFVVV-DME-HG---PGGISDALACLHALAATGTPAILRLPESC-PTWAKKALDLGPQGVMFP 164 (355)
Q Consensus 96 p~~~e~aa~~G~D~vil-DlE-h~---~~~~~~a~~~i~a~~~~g~~~iVRV~~~~-~~~i~~aLdaGa~GImvP 164 (355)
.+.++.+...|++.+++ +.. ++ ..+.+..+.+... .+.++++ ..+.. +..+.+++..|++||++=
T Consensus 155 ~e~~~~~~~~G~~~i~~~~~~~~g~~~g~~~~~i~~l~~~---~~ipvia-~GGI~~~~d~~~~~~~Gadgv~vg 225 (252)
T 1ka9_F 155 VEWAVKGVELGAGEILLTSMDRDGTKEGYDLRLTRMVAEA---VGVPVIA-SGGAGRMEHFLEAFQAGAEAALAA 225 (252)
T ss_dssp HHHHHHHHHHTCCEEEEEETTTTTTCSCCCHHHHHHHHHH---CSSCEEE-ESCCCSHHHHHHHHHTTCSEEEES
T ss_pred HHHHHHHHHcCCCEEEEecccCCCCcCCCCHHHHHHHHHH---cCCCEEE-eCCCCCHHHHHHHHHCCCHHHHHH
Confidence 56778888999998776 322 11 2344444444332 3444433 34444 688999999999999874
No 412
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=45.38 E-value=93 Score=23.24 Aligned_cols=99 Identities=14% Similarity=0.042 Sum_probs=56.4
Q ss_pred hHHHHHHHcCCcEEEEEEecCCH-HHHHHhhhc-CCcEEEEeCCCCC-CCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSP-TLAEISGLA-GYDFVVVDMEHGP-GGISDALACLHALAATGTPAILRLPESCPTWA 150 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp-~~~e~aa~~-G~D~vilDlEh~~-~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i 150 (355)
..+++.|......+ .. ..+. +..+.+... .+|.|++|+.-.. .+--+....++.. ....++++=....+....
T Consensus 19 ~~l~~~L~~~g~~v--~~-~~~~~~a~~~l~~~~~~dlvi~d~~l~~~~~g~~~~~~l~~~-~~~~~ii~~s~~~~~~~~ 94 (132)
T 2rdm_A 19 LDFESTLTDAGFLV--TA-VSSGAKAIEMLKSGAAIDGVVTDIRFCQPPDGWQVARVAREI-DPNMPIVYISGHAALEWA 94 (132)
T ss_dssp HHHHHHHHHTTCEE--EE-ESSHHHHHHHHHTTCCCCEEEEESCCSSSSCHHHHHHHHHHH-CTTCCEEEEESSCCTTHH
T ss_pred HHHHHHHHHcCCEE--EE-ECCHHHHHHHHHcCCCCCEEEEeeeCCCCCCHHHHHHHHHhc-CCCCCEEEEeCCccHHHH
Confidence 45667776433322 22 3444 455666665 7999999998753 4433433344432 234455554444445555
Q ss_pred HHHHhcCCCeEeecCCCCHHHHHHHHHHc
Q 018508 151 KKALDLGPQGVMFPMIDSPEAAKEAVSYC 179 (355)
Q Consensus 151 ~~aLdaGa~GImvP~Vesaeea~~vv~a~ 179 (355)
..+++.| + .+++--+.+++...++.+
T Consensus 95 ~~~~~~~--~-~l~kP~~~~~l~~~i~~~ 120 (132)
T 2rdm_A 95 SNGVPDS--I-ILEKPFTSAQLITAVSQL 120 (132)
T ss_dssp HHSCTTC--E-EEESSCCHHHHHHHHHHH
T ss_pred HhhcCCc--c-eEeCCCCHHHHHHHHHHH
Confidence 6666665 3 566666788888777665
No 413
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=45.37 E-value=94 Score=28.96 Aligned_cols=85 Identities=13% Similarity=0.126 Sum_probs=0.0
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCC------CCCCHHHHHHHHHHHHhCC-CCeEEcCCCCC
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEH------GPGGISDALACLHALAATG-TPAILRLPESC 146 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh------~~~~~~~a~~~i~a~~~~g-~~~iVRV~~~~ 146 (355)
+..++..+.|=.++-... ++|..++.+...|.|.| +.+-- +..+.+..+.++.. ... .++++==.=..
T Consensus 115 ~aa~~L~k~Gf~Vlpy~~--~D~~~ak~l~~~G~~aV-mPlg~pIGsG~Gi~~~~~L~~i~~~--~~~~vPVI~~GGI~t 189 (268)
T 2htm_A 115 KAAERLIEEDFLVLPYMG--PDLVLAKRLAALGTATV-MPLAAPIGSGWGVRTRALLELFARE--KASLPPVVVDAGLGL 189 (268)
T ss_dssp HHHHHHHHTTCEECCEEC--SCHHHHHHHHHHTCSCB-EEBSSSTTTCCCSTTHHHHHHHHHT--TTTSSCBEEESCCCS
T ss_pred HHHHHHHHCCCEEeeccC--CCHHHHHHHHhcCCCEE-EecCccCcCCcccCCHHHHHHHHHh--cCCCCeEEEeCCCCC
Q ss_pred HHHHHHHHhcCCCeEee
Q 018508 147 PTWAKKALDLGPQGVMF 163 (355)
Q Consensus 147 ~~~i~~aLdaGa~GImv 163 (355)
+.++..+++.|++||++
T Consensus 190 psDAa~AmeLGAdgVlV 206 (268)
T 2htm_A 190 PSHAAEVMELGLDAVLV 206 (268)
T ss_dssp HHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHcCCCEEEE
No 414
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=45.27 E-value=97 Score=29.13 Aligned_cols=72 Identities=13% Similarity=0.015 Sum_probs=45.4
Q ss_pred hhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhC--CCCeEEcCCCCCHHHHHHHHhcCCCeEeec--CCCC--HHHHHHH
Q 018508 102 SGLAGYDFVVVDMEHGPGGISDALACLHALAAT--GTPAILRLPESCPTWAKKALDLGPQGVMFP--MIDS--PEAAKEA 175 (355)
Q Consensus 102 aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~--g~~~iVRV~~~~~~~i~~aLdaGa~GImvP--~Ves--aeea~~v 175 (355)
.+..|+++|.+|.--.+...+..+.+.+ .. ..+++|-=.=.+++++++++++||++|++= .+++ ++-++++
T Consensus 195 gad~G~~lV~LD~~~~~v~~e~V~~I~~---~~~~~iPV~vGGGIrs~Eda~~ll~aGAD~VVVGSAav~d~~Pelv~e~ 271 (286)
T 3vk5_A 195 ARAFGFHMVYLYSRNEHVPPEVVRHFRK---GLGPDQVLFVSGNVRSGRQVTEYLDSGADYVGFAGALEQPDWRSALAEI 271 (286)
T ss_dssp HHHTTCSEEEEECSSSCCCHHHHHHHHH---HSCTTCEEEEESSCCSHHHHHHHHHTTCSEEEESGGGSSTTHHHHHHHH
T ss_pred HHHcCCCEEEEcCCCCcCCHHHHHHHHH---hcCCCCCEEEEeCCCCHHHHHHHHHcCCCEEEECchhhcCCCHHHHHHH
Confidence 3456789999996443333333333222 23 456666533346789999999999999973 4566 6666666
Q ss_pred H
Q 018508 176 V 176 (355)
Q Consensus 176 v 176 (355)
+
T Consensus 272 a 272 (286)
T 3vk5_A 272 A 272 (286)
T ss_dssp H
T ss_pred H
Confidence 5
No 415
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=45.04 E-value=42 Score=31.49 Aligned_cols=69 Identities=12% Similarity=-0.016 Sum_probs=43.1
Q ss_pred HHHHHHh-hhcCCcEEEEeCCCC-------CCCHHHHHHHHHHHHhCCCCeEEc-CCC-CCHHHHHHHHhcCCCeEeec
Q 018508 96 PTLAEIS-GLAGYDFVVVDMEHG-------PGGISDALACLHALAATGTPAILR-LPE-SCPTWAKKALDLGPQGVMFP 164 (355)
Q Consensus 96 p~~~e~a-a~~G~D~vilDlEh~-------~~~~~~a~~~i~a~~~~g~~~iVR-V~~-~~~~~i~~aLdaGa~GImvP 164 (355)
+..+..+ ...++|.+.+|+.+. ..+.....+.+++++..+.+++|+ |.. ..+...+++.++|+++|.+-
T Consensus 134 ~~~~~~a~~~~~~~a~~i~~n~~~~~~~~~~~~~~~~~~~i~~vr~~~~Pv~vK~v~~g~~~e~a~~~~~~G~d~I~vs 212 (332)
T 1vcf_A 134 RDDLLRLVEMLEADALAFHVNPLQEAVQRGDTDFRGLVERLAELLPLPFPVMVKEVGHGLSREAALALRDLPLAAVDVA 212 (332)
T ss_dssp HHHHHHHHHHHTCSEEEEECCHHHHHHTTSCCCCTTHHHHHHHHCSCSSCEEEECSSSCCCHHHHHHHTTSCCSEEECC
T ss_pred hHHHHHHHhhcCCCceeeccchHHHHhcCCCccHHHHHHHHHHHHcCCCCEEEEecCCCCCHHHHHHHHHcCCCEEEeC
Confidence 4444333 345789888887542 122112344565554467889999 522 35667888899999999983
No 416
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=44.38 E-value=1.1e+02 Score=28.13 Aligned_cols=101 Identities=9% Similarity=0.039 Sum_probs=61.9
Q ss_pred EEccHHHHHHHHHHhccCCcc--EEEEChhhHHhh--cCCCCCCCCHHHHHHHHHHHHHHHhCCCceeeccc--------
Q 018508 218 QVESEEGVKRAEDIAAVDGVD--CVQMGPLDLSAS--MGYLWDPGHRKVREMMRVAEKGVLGGGKAYLAGFA-------- 285 (355)
Q Consensus 218 mIET~~av~nieeIaavpgVD--~l~iGp~DLs~s--lG~~~~~~~p~v~~ai~~iv~aa~a~g~~~~g~~~-------- 285 (355)
++.+..+++.+-+ . |+| .|++..+|.-.. ++. ..++.++.+.++++.++++|+.+.+.+.
T Consensus 79 l~~~~~~i~~a~~---a-g~~~v~i~~~~sd~~~~~~~~~----~~~e~l~~~~~~i~~a~~~G~~v~~~l~~~~~~~~~ 150 (298)
T 2cw6_A 79 LTPNLKGFEAAVA---A-GAKEVVIFGAASELFTKKNINC----SIEESFQRFDAILKAAQSANISVRGYVSCALGCPYE 150 (298)
T ss_dssp ECCSHHHHHHHHH---T-TCSEEEEEEESCHHHHHHHHSC----CHHHHHHHHHHHHHHHHHTTCEEEEEEETTTCBTTT
T ss_pred EcCCHHhHHHHHH---C-CCCEEEEEecCCHHHHHHHhCC----CHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcC
Confidence 3455555554433 1 444 356677776433 333 3467788888899999999987643321
Q ss_pred --CCch----hHHHHHHCCCCEEEecchHHHH-HHHHHHHHHHHHHhc
Q 018508 286 --MPHD----APLEMKSRGYHMVSGAVDVGLF-RSAAVEDVARFKMNL 326 (355)
Q Consensus 286 --~d~~----~a~~~~~~G~~~vs~~~D~~ll-~~~~~~~~~~~r~~~ 326 (355)
.+++ .++.+.+.|.+.+.+...++++ -....+.+..+|...
T Consensus 151 ~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~ 198 (298)
T 2cw6_A 151 GKISPAKVAEVTKKFYSMGCYEISLGDTIGVGTPGIMKDMLSAVMQEV 198 (298)
T ss_dssp BSCCHHHHHHHHHHHHHTTCSEEEEEETTSCCCHHHHHHHHHHHHHHS
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEecCCCCCcCHHHHHHHHHHHHHhC
Confidence 1333 4667789999999888665543 334455666666654
No 417
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=44.14 E-value=1.1e+02 Score=28.41 Aligned_cols=77 Identities=21% Similarity=0.218 Sum_probs=51.6
Q ss_pred HHHHHhhhcCCcEEEEeCCCC---CCCHHHHHHHHHHHH---hCCCCeEEcCCCCCHHH----HHHHHhcCCCeEee--c
Q 018508 97 TLAEISGLAGYDFVVVDMEHG---PGGISDALACLHALA---ATGTPAILRLPESCPTW----AKKALDLGPQGVMF--P 164 (355)
Q Consensus 97 ~~~e~aa~~G~D~vilDlEh~---~~~~~~a~~~i~a~~---~~g~~~iVRV~~~~~~~----i~~aLdaGa~GImv--P 164 (355)
..++.+...|.|.+++=---| ..+.++-.++++.+. ....++++=+...+... .+.+-++|+++||+ |
T Consensus 41 ~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~st~~ai~la~~A~~~Gadavlv~~P 120 (304)
T 3cpr_A 41 EVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGVGTNNTRTSVELAEAAASAGADGLLVVTP 120 (304)
T ss_dssp HHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecCCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 456677788999999876433 456666666555432 34577888998877643 56678899999765 5
Q ss_pred CC--CCHHHHH
Q 018508 165 MI--DSPEAAK 173 (355)
Q Consensus 165 ~V--esaeea~ 173 (355)
.- -+.+++.
T Consensus 121 ~y~~~~~~~l~ 131 (304)
T 3cpr_A 121 YYSKPSQEGLL 131 (304)
T ss_dssp CSSCCCHHHHH
T ss_pred CCCCCCHHHHH
Confidence 43 2555554
No 418
>1vfs_A Alanine racemase; TIM-barrel, greek-KEY motief, isomerase; HET: KCX DCS; 1.90A {Streptomyces lavendulae} SCOP: b.49.2.2 c.1.6.1 PDB: 1vfh_A* 1vft_A*
Probab=43.92 E-value=2.1e+02 Score=26.97 Aligned_cols=73 Identities=16% Similarity=0.026 Sum_probs=47.3
Q ss_pred CCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCC-eEEcCCCCCHHHHHHHHhcCCCeEeecCCCCHHHH
Q 018508 94 FSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTP-AILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAA 172 (355)
Q Consensus 94 ~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~-~iVRV~~~~~~~i~~aLdaGa~GImvP~Vesaeea 172 (355)
+++.+++.+...|++.+- ....+++..+..+ |.. +++=++...+..+..+++.+ | .+.|+|.+++
T Consensus 45 g~~~i~~~l~~~G~~~f~------vas~~Ea~~~~~~----G~~~~il~~~~~~~~~~~~~~~~~---i-~~~vds~~~l 110 (386)
T 1vfs_A 45 GAVPCARAAQEAGAAWLG------TATPEEALELRAA----GIQGRIMCWLWTPGGPWREAIETD---I-DVSVSGMWAL 110 (386)
T ss_dssp CHHHHHHHHHHHTCCEEE------ESSHHHHHHHHHT----TCCSEEEECCCCTTCCHHHHHHTT---C-EEEECSHHHH
T ss_pred CHHHHHHHHHHCCCCEEE------EeeHHHHHHHHhc----CCCCCEEEECCCCHHHHHHHHHcC---C-EEEECCHHHH
Confidence 457778878888987543 2456666554432 332 33335555555688888754 3 4689999999
Q ss_pred HHHHHHcC
Q 018508 173 KEAVSYCR 180 (355)
Q Consensus 173 ~~vv~a~~ 180 (355)
+.+.+.++
T Consensus 111 ~~l~~~a~ 118 (386)
T 1vfs_A 111 DEVRAAAR 118 (386)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99887653
No 419
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=43.86 E-value=2.1e+02 Score=26.76 Aligned_cols=75 Identities=15% Similarity=0.055 Sum_probs=42.6
Q ss_pred EEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHH--------HHHHHHHHHHh-CCCCeEE--cCCCCCHHHHHHHHhc
Q 018508 88 GLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGIS--------DALACLHALAA-TGTPAIL--RLPESCPTWAKKALDL 156 (355)
Q Consensus 88 gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~--------~a~~~i~a~~~-~g~~~iV--RV~~~~~~~i~~aLda 156 (355)
|.......++.++.....|+|.|.+ ||..+.+.. .-.+.|+.++. ...|+++ |+.. -..++.++.+
T Consensus 23 gv~~d~~~~e~A~~ye~~GA~~lsv-Le~~~~Di~~~~g~~R~~~~~~i~~i~~~v~iPvl~k~~i~~--ide~qil~aa 99 (297)
T 4adt_A 23 GVIMDVKNVEQAKIAEKAGAIGVMI-LENIPSELRNTDGVARSVDPLKIEEIRKCISINVLAKVRIGH--FVEAQILEEL 99 (297)
T ss_dssp CEEEEESSHHHHHHHHHHTCSEEEE-CCCCC-----CCCCCCCCCHHHHHHHHTTCCSEEEEEEETTC--HHHHHHHHHT
T ss_pred CcccCCCcHHHHHHHHHcCCCEEEE-ecCCCCcchhcCCcccCCCHHHHHHHHHhcCCCEEEeccCCc--HHHHHHHHHc
Confidence 3444667889999999999998543 333322111 11234444433 3445443 4443 4556777789
Q ss_pred CCCeEeecC
Q 018508 157 GPQGVMFPM 165 (355)
Q Consensus 157 Ga~GImvP~ 165 (355)
||+.|-.+.
T Consensus 100 GAD~Id~s~ 108 (297)
T 4adt_A 100 KVDMLDESE 108 (297)
T ss_dssp TCSEEEEET
T ss_pred CCCEEEcCC
Confidence 999994333
No 420
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=43.79 E-value=36 Score=28.84 Aligned_cols=67 Identities=9% Similarity=0.016 Sum_probs=41.9
Q ss_pred HHHHHhhhcCCcE-EEEeC-CCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCC-HHHHHHHHhcCCCeEeec
Q 018508 97 TLAEISGLAGYDF-VVVDM-EHGPGGISDALACLHALAATGTPAILRLPESC-PTWAKKALDLGPQGVMFP 164 (355)
Q Consensus 97 ~~~e~aa~~G~D~-vilDl-Eh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~-~~~i~~aLdaGa~GImvP 164 (355)
+.++.+...|+.. ++.++ +++... .-..+.++.+......|+|=+++.. +..+.++++.|++|+++=
T Consensus 134 ~~i~~~~~~~~~~vli~~~~~~g~~~-g~~~~~i~~~~~~~~~Pvia~~g~~~~~~~~~~~~~G~~~~~vg 203 (237)
T 3cwo_X 134 DWVVEVEKRGAGEILLTSIDRDGTKS-GYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAGADAALAA 203 (237)
T ss_dssp HHHHHHHHHTCSEEEEEETTTTTCCS-CCCHHHHHHHGGGCCSCEEEESCCCSHHHHHHHHHHTCSEEEES
T ss_pred HHHHHHhhcCCCeEEEEecCCCCccc-cccHHHHHHHHHhcCCCEEecCCCCCHHHHHHHHHcCcHHHhhh
Confidence 5667788888874 55565 555321 1113445544433345666666664 778899999999998753
No 421
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=43.75 E-value=96 Score=26.77 Aligned_cols=77 Identities=13% Similarity=0.167 Sum_probs=40.0
Q ss_pred HHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhC-CCCeE--EcCCCC--C-HHHHHHHHhcCCCeEeecCCCCHHH
Q 018508 98 LAEISGLAGYDFVVVDMEHGPGGISDALACLHALAAT-GTPAI--LRLPES--C-PTWAKKALDLGPQGVMFPMIDSPEA 171 (355)
Q Consensus 98 ~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~-g~~~i--VRV~~~--~-~~~i~~aLdaGa~GImvP~Vesaee 171 (355)
..+.+...|.+++.+|..++-+ ...=...++.++.. +..++ +...+. . ...+..+.++|++.|.+=-.-+.+-
T Consensus 14 ~~~~~~~~~~~~~~~kv~~~~f-~~~G~~~i~~lr~~~~~~v~~D~kl~DI~~t~~~~v~~~~~~Gad~vtvh~~~g~~~ 92 (208)
T 2czd_A 14 AIKIAKSVKDYISMIKVNWPLI-LGSGVDIIRRLKEETGVEIIADLKLADIPNTNRLIARKVFGAGADYVIVHTFVGRDS 92 (208)
T ss_dssp HHHHHHHHGGGCSEEEEEHHHH-HHHCTTHHHHHHHHHCCEEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEESTTCHHH
T ss_pred HHHHHHHhcccccEEEecHHHH-HhhCHHHHHHHHHcCCCEEEEEeeeCchHHHHHHHHHHHHhcCCCEEEEeccCCHHH
Confidence 4455566778888888877643 11001123333322 44332 333322 1 2346778899999886644444444
Q ss_pred HHHH
Q 018508 172 AKEA 175 (355)
Q Consensus 172 a~~v 175 (355)
++.+
T Consensus 93 i~~~ 96 (208)
T 2czd_A 93 VMAV 96 (208)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4444
No 422
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=43.08 E-value=69 Score=29.99 Aligned_cols=21 Identities=19% Similarity=-0.181 Sum_probs=18.8
Q ss_pred CCHHHHHHhhhcCCcEEEEeC
Q 018508 94 FSPTLAEISGLAGYDFVVVDM 114 (355)
Q Consensus 94 ~sp~~~e~aa~~G~D~vilDl 114 (355)
.+++.++.+...|+|+|.+..
T Consensus 193 ~~~e~a~~~~~~G~d~I~vs~ 213 (332)
T 1vcf_A 193 LSREAALALRDLPLAAVDVAG 213 (332)
T ss_dssp CCHHHHHHHTTSCCSEEECCC
T ss_pred CCHHHHHHHHHcCCCEEEeCC
Confidence 688899999999999999975
No 423
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=43.01 E-value=2.6e+02 Score=27.63 Aligned_cols=113 Identities=16% Similarity=0.230 Sum_probs=0.0
Q ss_pred HHHHHhhhcCCcEEEEeCCCCCCCH--------HHHHHHHHHHHh-----------------------------------
Q 018508 97 TLAEISGLAGYDFVVVDMEHGPGGI--------SDALACLHALAA----------------------------------- 133 (355)
Q Consensus 97 ~~~e~aa~~G~D~vilDlEh~~~~~--------~~a~~~i~a~~~----------------------------------- 133 (355)
..++.+.. ++|+|.|.+ -+|..+ +.+.+++.+++.
T Consensus 201 ~~a~~l~~-~aD~ieiNi-scPnt~Glr~lq~~~~l~~il~~v~~~~~~~~~~~~~~~g~~~~~~~~vv~~~~~~~~~~~ 278 (443)
T 1tv5_A 201 YCINKIGR-YADYIAINV-SSPNTPGLRDNQEAGKLKNIILSVKEEIDNLEKNNIMNDESTYNEDNKIVEKKNNFNKNNS 278 (443)
T ss_dssp HHHHHHGG-GCSEEEEEC-CCTTSTTGGGGGSHHHHHHHHHHHHHHHHHHC-----------------------------
T ss_pred HHHHHHhc-CCCEEEEec-cCCCCcccccccCHHHHHHHHHHHHHHHhhhcccCccccccCHHHHHHHHHHhhcccccch
Q ss_pred ----------------CCCC-eEEcCCC-CCHHH----HHHHHhcCCCeEeecCCCC-----------------------
Q 018508 134 ----------------TGTP-AILRLPE-SCPTW----AKKALDLGPQGVMFPMIDS----------------------- 168 (355)
Q Consensus 134 ----------------~g~~-~iVRV~~-~~~~~----i~~aLdaGa~GImvP~Ves----------------------- 168 (355)
...+ ++||+.. .+... .+.+.++|++||++---..
T Consensus 279 ~~~~~~~~~~~~~~~~~~~P~V~vKispd~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~ 358 (443)
T 1tv5_A 279 HMMKDAKDNFLWFNTTKKKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDI 358 (443)
T ss_dssp ---------CCCCSSSSSCCEEEEEECSCCCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHH
T ss_pred hhhhhhhhcchhcccCCCCCeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHH
Q ss_pred -HHHHHHHHHHc--CCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEEccHHHHHHHHHHhccCCccEEEEChh
Q 018508 169 -PEAAKEAVSYC--RFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKRAEDIAAVDGVDCVQMGPL 245 (355)
Q Consensus 169 -aeea~~vv~a~--~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mIET~~av~nieeIaavpgVD~l~iGp~ 245 (355)
.+-++++.+.+ +-| |++.=--..+-+..+-|.+ |.|+|.+|+.
T Consensus 359 sl~~i~~v~~~v~~~iP--------------------------------VIg~GGI~s~~DA~e~l~a--GAd~Vqigra 404 (443)
T 1tv5_A 359 STKFICEMYNYTNKQIP--------------------------------IIASGGIFSGLDALEKIEA--GASVCQLYSC 404 (443)
T ss_dssp HHHHHHHHHHHTTTCSC--------------------------------EEEESSCCSHHHHHHHHHT--TEEEEEESHH
T ss_pred HHHHHHHHHHHcCCCCc--------------------------------EEEECCCCCHHHHHHHHHc--CCCEEEEcHH
No 424
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=42.61 E-value=1.2e+02 Score=27.94 Aligned_cols=99 Identities=13% Similarity=0.075 Sum_probs=56.9
Q ss_pred CCchHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEc----CC---
Q 018508 71 PSPESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILR----LP--- 143 (355)
Q Consensus 71 ~~~n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVR----V~--- 143 (355)
+....++..+++|-..+.++.+.+....-.++... . ....+.+.+.++.++..|..+.+= +.
T Consensus 81 ~~~~~i~~a~~ag~~~v~i~~~~sd~~~~~~~~~~-~----------~e~l~~~~~~i~~a~~~G~~v~~~l~~~~~~~~ 149 (298)
T 2cw6_A 81 PNLKGFEAAVAAGAKEVVIFGAASELFTKKNINCS-I----------EESFQRFDAILKAAQSANISVRGYVSCALGCPY 149 (298)
T ss_dssp CSHHHHHHHHHTTCSEEEEEEESCHHHHHHHHSCC-H----------HHHHHHHHHHHHHHHHTTCEEEEEEETTTCBTT
T ss_pred CCHHhHHHHHHCCCCEEEEEecCCHHHHHHHhCCC-H----------HHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCc
Confidence 34556788888888888888776654332222110 0 011233344455555555543211 10
Q ss_pred --CCCHH----HHHHHHhcCCCeEeecC---CCCHHHHHHHHHHcC
Q 018508 144 --ESCPT----WAKKALDLGPQGVMFPM---IDSPEAAKEAVSYCR 180 (355)
Q Consensus 144 --~~~~~----~i~~aLdaGa~GImvP~---Vesaeea~~vv~a~~ 180 (355)
..++. .++++.++|++.|.++- +-+|+++.++++.++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~ 195 (298)
T 2cw6_A 150 EGKISPAKVAEVTKKFYSMGCYEISLGDTIGVGTPGIMKDMLSAVM 195 (298)
T ss_dssp TBSCCHHHHHHHHHHHHHTTCSEEEEEETTSCCCHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEecCCCCCcCHHHHHHHHHHHH
Confidence 11233 24667788999888884 468999999998875
No 425
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=42.28 E-value=1.5e+02 Score=27.31 Aligned_cols=96 Identities=15% Similarity=0.042 Sum_probs=59.9
Q ss_pred CcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCC--------CCHHH----HHHHHHHHHhCCCCeE---EcCCC----
Q 018508 84 ETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGP--------GGISD----ALACLHALAATGTPAI---LRLPE---- 144 (355)
Q Consensus 84 ~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~--------~~~~~----a~~~i~a~~~~g~~~i---VRV~~---- 144 (355)
...+..++ .+.+.++.+..+|+|.|-+-.--+. .+.++ +++.++.++..|..+- -.+-+
T Consensus 76 ~~~~~~l~--~~~~~i~~a~~aG~~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~ 153 (302)
T 2ftp_A 76 GVTYAALA--PNLKGFEAALESGVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISCVLGCPYD 153 (302)
T ss_dssp TSEEEEEC--CSHHHHHHHHHTTCCEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTT
T ss_pred CCEEEEEe--CCHHHHHHHHhCCcCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcC
Confidence 34555555 5888899999999999876221111 22333 3445555566665431 11211
Q ss_pred --CCHHH----HHHHHhcCCCeEeecC---CCCHHHHHHHHHHcCC
Q 018508 145 --SCPTW----AKKALDLGPQGVMFPM---IDSPEAAKEAVSYCRF 181 (355)
Q Consensus 145 --~~~~~----i~~aLdaGa~GImvP~---Vesaeea~~vv~a~~~ 181 (355)
.++.. ++++.+.|++.|.++- +-+|+++.++++.++.
T Consensus 154 ~~~~~~~~~~~~~~~~~~G~d~i~l~DT~G~~~P~~~~~lv~~l~~ 199 (302)
T 2ftp_A 154 GDVDPRQVAWVARELQQMGCYEVSLGDTIGVGTAGATRRLIEAVAS 199 (302)
T ss_dssp BCCCHHHHHHHHHHHHHTTCSEEEEEESSSCCCHHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEeCCCCCcCHHHHHHHHHHHHH
Confidence 23443 4556789999999883 4689999999999864
No 426
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=42.02 E-value=1.1e+02 Score=24.61 Aligned_cols=77 Identities=12% Similarity=0.081 Sum_probs=47.8
Q ss_pred EEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHH-h-CCCCeEEcCCCCCHHHHHHHHhcCCCeEeecCCC
Q 018508 90 FLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALA-A-TGTPAILRLPESCPTWAKKALDLGPQGVMFPMID 167 (355)
Q Consensus 90 ~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~-~-~g~~~iVRV~~~~~~~i~~aLdaGa~GImvP~Ve 167 (355)
.....++...+.+.-.++|.|++-..+. +.-......++ . ....+++|+++.+... .+..+|++-|+.|...
T Consensus 55 ~gd~~~~~~l~~a~i~~ad~vi~~~~~d----~~n~~~~~~a~~~~~~~~ii~~~~~~~~~~--~l~~~G~~~vi~p~~~ 128 (153)
T 1id1_A 55 PGDSNDSSVLKKAGIDRCRAILALSDND----ADNAFVVLSAKDMSSDVKTVLAVSDSKNLN--KIKMVHPDIILSPQLF 128 (153)
T ss_dssp ESCTTSHHHHHHHTTTTCSEEEECSSCH----HHHHHHHHHHHHHTSSSCEEEECSSGGGHH--HHHTTCCSEEECHHHH
T ss_pred EcCCCCHHHHHHcChhhCCEEEEecCCh----HHHHHHHHHHHHHCCCCEEEEEECCHHHHH--HHHHcCCCEEEcHHHH
Confidence 3456678887777667899999877542 22222222232 2 3457889998865543 3456899999888654
Q ss_pred CHHHH
Q 018508 168 SPEAA 172 (355)
Q Consensus 168 saeea 172 (355)
.++.+
T Consensus 129 ~~~~l 133 (153)
T 1id1_A 129 GSEIL 133 (153)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44433
No 427
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=41.99 E-value=1.8e+02 Score=27.59 Aligned_cols=66 Identities=21% Similarity=0.256 Sum_probs=39.7
Q ss_pred HHHHhhhcCCcEEEEeCCCC--------CC----------CHH----HHHHHHHHHHh-C--CCCeEEcCCCCC------
Q 018508 98 LAEISGLAGYDFVVVDMEHG--------PG----------GIS----DALACLHALAA-T--GTPAILRLPESC------ 146 (355)
Q Consensus 98 ~~e~aa~~G~D~vilDlEh~--------~~----------~~~----~a~~~i~a~~~-~--g~~~iVRV~~~~------ 146 (355)
.++.+..+|||.|=|..-|+ |. +.+ -+.+++++++. . ..++.||++..+
T Consensus 148 AA~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~pv~vRls~~~~~~~g~ 227 (343)
T 3kru_A 148 AAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENKPIFVRVSADDYMEGGI 227 (343)
T ss_dssp HHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTSCEEEEEECCCSSTTSC
T ss_pred HHhhccccCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCccCCeEEEeechhhhccCc
Confidence 45666778999999997775 11 111 12456666653 3 357899998642
Q ss_pred -HH---H-HHHHHhcCCCeEeec
Q 018508 147 -PT---W-AKKALDLGPQGVMFP 164 (355)
Q Consensus 147 -~~---~-i~~aLdaGa~GImvP 164 (355)
.. . ++.+-++ ++.|-+.
T Consensus 228 ~~~~~~~~a~~l~~~-vd~i~vs 249 (343)
T 3kru_A 228 NIDMMVEYINMIKDK-VDLIDVS 249 (343)
T ss_dssp CHHHHHHHHHHHTTT-CSEEEEE
T ss_pred cHHHHHHHHHHhhcc-ccEEecc
Confidence 11 1 2334455 7777764
No 428
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=41.89 E-value=1e+02 Score=26.09 Aligned_cols=27 Identities=7% Similarity=-0.155 Sum_probs=18.1
Q ss_pred CeEEcCCCCCHHHHHHHHhcCCCeEee
Q 018508 137 PAILRLPESCPTWAKKALDLGPQGVMF 163 (355)
Q Consensus 137 ~~iVRV~~~~~~~i~~aLdaGa~GImv 163 (355)
.+++=..+.++..+..++++|+++|.+
T Consensus 151 ~pvia~GGI~~~~~~~~~~~Ga~~v~v 177 (205)
T 1wa3_A 151 VKFVPTGGVNLDNVCEWFKAGVLAVGV 177 (205)
T ss_dssp CEEEEBSSCCTTTHHHHHHHTCSCEEE
T ss_pred CcEEEcCCCCHHHHHHHHHCCCCEEEE
Confidence 344444555566788888888888765
No 429
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=41.72 E-value=89 Score=31.99 Aligned_cols=66 Identities=23% Similarity=0.149 Sum_probs=40.1
Q ss_pred HHHHhhhcCCcEEEEeCCCC--------CC----------CHH-H---HHHHHHHHHh-C--CCCeEEcCCCC-------
Q 018508 98 LAEISGLAGYDFVVVDMEHG--------PG----------GIS-D---ALACLHALAA-T--GTPAILRLPES------- 145 (355)
Q Consensus 98 ~~e~aa~~G~D~vilDlEh~--------~~----------~~~-~---a~~~i~a~~~-~--g~~~iVRV~~~------- 145 (355)
.++.+..+|||.|=|.+-|+ |. +.+ . +.+++++++. . ..++.||++..
T Consensus 146 aA~~a~~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~~~~v~vrls~~~~~~~g~ 225 (671)
T 1ps9_A 146 CAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDLVEDGG 225 (671)
T ss_dssp HHHHHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEECCSTTCC
T ss_pred HHHHHHHcCCCEEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcCCCceEEEEECccccCCCCC
Confidence 34566679999999998874 21 111 2 3445555542 2 45667998742
Q ss_pred CHH----HHHHHHhcCCCeEee
Q 018508 146 CPT----WAKKALDLGPQGVMF 163 (355)
Q Consensus 146 ~~~----~i~~aLdaGa~GImv 163 (355)
+.. .++.+-++|++.|-+
T Consensus 226 ~~~~~~~~a~~l~~~g~d~i~v 247 (671)
T 1ps9_A 226 TFAETVELAQAIEAAGATIINT 247 (671)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEE
T ss_pred CHHHHHHHHHHHHhcCCCEEEc
Confidence 222 245556789998865
No 430
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=41.71 E-value=2.1e+02 Score=26.33 Aligned_cols=77 Identities=22% Similarity=0.218 Sum_probs=51.4
Q ss_pred HHHHHhhhcCCcEEEEeCCCC---CCCHHHHHHHHHHHH---hCCCCeEEcCCCCCHHH----HHHHHhcCCCeEee--c
Q 018508 97 TLAEISGLAGYDFVVVDMEHG---PGGISDALACLHALA---ATGTPAILRLPESCPTW----AKKALDLGPQGVMF--P 164 (355)
Q Consensus 97 ~~~e~aa~~G~D~vilDlEh~---~~~~~~a~~~i~a~~---~~g~~~iVRV~~~~~~~----i~~aLdaGa~GImv--P 164 (355)
..++.+...|.|.+++=---| ..+.++-.++++.+. ....++++=+...+... .+.+-++|+++||+ |
T Consensus 37 ~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 116 (301)
T 1xky_A 37 KLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTGSNNTHASIDLTKKATEVGVDAVMLVAP 116 (301)
T ss_dssp HHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCCCCCCHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 356677788999998866444 356666666655432 34578889998877643 46678899999765 5
Q ss_pred CCC--CHHHHH
Q 018508 165 MID--SPEAAK 173 (355)
Q Consensus 165 ~Ve--saeea~ 173 (355)
.-. |.+++.
T Consensus 117 ~y~~~s~~~l~ 127 (301)
T 1xky_A 117 YYNKPSQEGMY 127 (301)
T ss_dssp CSSCCCHHHHH
T ss_pred CCCCCCHHHHH
Confidence 432 555554
No 431
>1dcf_A ETR1 protein; beta-alpha five sandwich, transferase; 2.50A {Arabidopsis thaliana} SCOP: c.23.1.2
Probab=41.58 E-value=1.1e+02 Score=23.10 Aligned_cols=102 Identities=13% Similarity=0.008 Sum_probs=56.6
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHH-HHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHH-HHhC--CCCe-EEcCCCCCHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPT-LAEISGLAGYDFVVVDMEHGPGGISDALACLHA-LAAT--GTPA-ILRLPESCPT 148 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~-~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a-~~~~--g~~~-iVRV~~~~~~ 148 (355)
..+++.|..-...+. ...+.. ..+.+.... |.|++|+.-...+--++...++. .... ..++ ++=....+..
T Consensus 21 ~~l~~~L~~~g~~v~---~~~~~~~a~~~~~~~~-dlvllD~~lp~~~g~~~~~~l~~~~~~~~~~~~~ii~~s~~~~~~ 96 (136)
T 1dcf_A 21 MVTKGLLVHLGCEVT---TVSSNEECLRVVSHEH-KVVFMDVCMPGVENYQIALRIHEKFTKQRHQRPLLVALSGNTDKS 96 (136)
T ss_dssp HHHHHHHHHTTCEEE---EESSHHHHHHHCCTTC-SEEEEECCSSTTTTTHHHHHHHHHHC-CCSCCCEEEEEESCCSHH
T ss_pred HHHHHHHHHcCCeEE---EeCCHHHHHHHHhccC-CEEEEeCCCCCCcHHHHHHHHHHhhhhccCCCceEEEEeCCCCHH
Confidence 346666664322222 234443 445554444 99999998643332233333332 1111 2333 3445555677
Q ss_pred HHHHHHhcCCCeEeecCCCCHHHHHHHHHHcC
Q 018508 149 WAKKALDLGPQGVMFPMIDSPEAAKEAVSYCR 180 (355)
Q Consensus 149 ~i~~aLdaGa~GImvP~Vesaeea~~vv~a~~ 180 (355)
...+++..|+++.+ +|=-+.+++...++.+.
T Consensus 97 ~~~~~~~~ga~~~l-~KP~~~~~L~~~l~~~~ 127 (136)
T 1dcf_A 97 TKEKCMSFGLDGVL-LKPVSLDNIRDVLSDLL 127 (136)
T ss_dssp HHHHHHHTTCCEEE-ESSCCHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCeEE-ECCCCHHHHHHHHHHHh
Confidence 78889999998865 33347888887776653
No 432
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=41.56 E-value=1.1e+02 Score=26.95 Aligned_cols=81 Identities=11% Similarity=-0.021 Sum_probs=46.7
Q ss_pred HHHHhhhcCCcEEEEeCCCCC---CCHHHHHHHHHHHHh-CCCCeEEcC----CCCCHHH----HHHHHhcCCCeEeecC
Q 018508 98 LAEISGLAGYDFVVVDMEHGP---GGISDALACLHALAA-TGTPAILRL----PESCPTW----AKKALDLGPQGVMFPM 165 (355)
Q Consensus 98 ~~e~aa~~G~D~vilDlEh~~---~~~~~a~~~i~a~~~-~g~~~iVRV----~~~~~~~----i~~aLdaGa~GImvP~ 165 (355)
.++.+...|+|.|=+-+.-+. .+.+...+.++++.. .+ +++|++ +..+... .+.+.++|+++|....
T Consensus 75 ~~~~A~~~Gad~Id~viN~g~~~~~~~~~~~~~i~~v~~a~~-pv~vKvi~e~~~l~~~~~~~~a~~a~eaGad~I~tst 153 (225)
T 1mzh_A 75 EAVEAVRDGAQELDIVWNLSAFKSEKYDFVVEELKEIFRETP-SAVHKVIVETPYLNEEEIKKAVEICIEAGADFIKTST 153 (225)
T ss_dssp HHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHTCT-TSEEEEECCGGGCCHHHHHHHHHHHHHHTCSEEECCC
T ss_pred HHHHHHHcCCCEEEEEecHHHHhcCChHHHHHHHHHHHHHhc-CceEEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEECC
Confidence 345677788887664343332 234555555666643 34 678887 3344433 4567788999993321
Q ss_pred C-----CCHHHHHHHHHHc
Q 018508 166 I-----DSPEAAKEAVSYC 179 (355)
Q Consensus 166 V-----esaeea~~vv~a~ 179 (355)
- -+.+.++.+.+.+
T Consensus 154 g~~~gga~~~~i~~v~~~v 172 (225)
T 1mzh_A 154 GFAPRGTTLEEVRLIKSSA 172 (225)
T ss_dssp SCSSSCCCHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHh
Confidence 0 1456666666654
No 433
>3mil_A Isoamyl acetate-hydrolyzing esterase; SGNH-hydrolase, hydrolase; 1.60A {Saccharomyces cerevisiae}
Probab=41.41 E-value=26 Score=29.77 Aligned_cols=58 Identities=10% Similarity=-0.100 Sum_probs=39.4
Q ss_pred cHHHHHHHHHHhc---cCCccEEEEChhhHHhhcCCCCCCCCHHHHHHHHHHHHHHHhCCCce
Q 018508 221 SEEGVKRAEDIAA---VDGVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVAEKGVLGGGKAY 280 (355)
Q Consensus 221 T~~av~nieeIaa---vpgVD~l~iGp~DLs~slG~~~~~~~p~v~~ai~~iv~aa~a~g~~~ 280 (355)
|...+..++.+.. -|.+-.|++|.||+...- .....-.++...+.++++.++++|.++
T Consensus 56 ~~~~~~~~~~~~~~~~~pd~vvi~~G~ND~~~~~--~~~~~~~~~~~~l~~~i~~~~~~~~~v 116 (240)
T 3mil_A 56 SRWALKILPEILKHESNIVMATIFLGANDACSAG--PQSVPLPEFIDNIRQMVSLMKSYHIRP 116 (240)
T ss_dssp HHHHHHHHHHHHHHCCCEEEEEEECCTTTTSSSS--TTCCCHHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHhcccCCCCEEEEEeecCcCCccC--CCCCCHHHHHHHHHHHHHHHHHcCCeE
Confidence 3567777887764 245567788999985421 112234567888999999999887653
No 434
>3eol_A Isocitrate lyase; seattle structural center for infectious disease, ssgcid; 2.00A {Brucella melitensis} PDB: 3oq8_A 3e5b_A 3p0x_A*
Probab=41.40 E-value=2.8e+02 Score=27.54 Aligned_cols=132 Identities=10% Similarity=0.017 Sum_probs=77.8
Q ss_pred HHHHHhhhcCCcEEEEeCCCC-C-----------CCHHHHHHHHHHHH------hCCCCeEEcCCCC-------------
Q 018508 97 TLAEISGLAGYDFVVVDMEHG-P-----------GGISDALACLHALA------ATGTPAILRLPES------------- 145 (355)
Q Consensus 97 ~~~e~aa~~G~D~vilDlEh~-~-----------~~~~~a~~~i~a~~------~~g~~~iVRV~~~------------- 145 (355)
+.++.+..+|+-.|-|.=+-. + ...+++..-|+++. .....++.|+...
T Consensus 164 rtVk~~~~AGaAGi~IEDQ~~~~KkCGH~~gk~lvp~ee~v~rI~AAr~A~~~~g~d~vIiARTDA~~a~l~~s~~d~rd 243 (433)
T 3eol_A 164 EIMKAYIEAGAAGVHFEDQLASEKKCGHLGGKVLIPTAAHIRNLNAARLAADVMGTPTLIVARTDAEAAKLLTSDIDERD 243 (433)
T ss_dssp HHHHHHHHHTCSEEEEESBCC---------CCEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECTTTCCEESCCCSTTT
T ss_pred HHHHHHHHcCCeEEEEecCCCCCCcCCCCCCCcccCHHHHHHHHHHHHHHHHhcCCCEEEEEEcCCccccccccCccccc
Confidence 456777889988877654332 1 34566665555542 1234456787642
Q ss_pred --------------------C-HHHHHH---HHhcCCCeEee-cCCCCHHHHHHHHHHcC--CCCCCCCCCccccccccc
Q 018508 146 --------------------C-PTWAKK---ALDLGPQGVMF-PMIDSPEAAKEAVSYCR--FPPSGVRGSAHTVVRASG 198 (355)
Q Consensus 146 --------------------~-~~~i~~---aLdaGa~GImv-P~Vesaeea~~vv~a~~--~pP~G~Rg~g~~~~ra~~ 198 (355)
. ...|.| ..+ |||.|.+ |...+.+|++++++.++ +|- . ...
T Consensus 244 ~~fl~g~g~r~~eG~y~~~~gld~AI~Ra~AY~~-GAD~If~e~~~~~~eei~~f~~~v~~~~P~--~---------~L~ 311 (433)
T 3eol_A 244 QPFVDYEAGRTAEGFYQVKNGIEPCIARAIAYAP-YCDLIWMETSKPDLAQARRFAEAVHKAHPG--K---------LLA 311 (433)
T ss_dssp GGGBCSSSCBCTTCCEEBCCSHHHHHHHHHHHGG-GCSEEEECCSSCCHHHHHHHHHHHHHHSTT--C---------CEE
T ss_pred ccceeccCcccccccccccCCHHHHHHHHHHHHh-cCCEEEEeCCCCCHHHHHHHHHHhcccCCC--c---------ccc
Confidence 1 123444 345 9999999 88889999999999987 441 0 001
Q ss_pred CCCCccccccCCCceEEEEEEccHHHHHHH-HHHhccCCccEEEEChhhHHhh
Q 018508 199 YGIDEGYLSNYEEELLIMCQVESEEGVKRA-EDIAAVDGVDCVQMGPLDLSAS 250 (355)
Q Consensus 199 ~g~~~~y~~~~n~~i~vi~mIET~~av~ni-eeIaavpgVD~l~iGp~DLs~s 250 (355)
|+..+.+.- ... -+.+-+.+. +|+++. |+..+++|..=|...
T Consensus 312 ~~~sPsfnw--~~~-------~~~~~~~~f~~eLa~l-Gv~~v~~~~a~~raa 354 (433)
T 3eol_A 312 YNCSPSFNW--KKN-------LDDATIAKFQRELGAM-GYKFQFITLAGFHQL 354 (433)
T ss_dssp EECCSSSCH--HHH-------SCHHHHHHHHHHHHHH-TEEEEEETTHHHHHH
T ss_pred cCCCCCCcc--ccc-------CChhHHhHHHHHHHHc-CCeEEEeCcHHHHHH
Confidence 111111100 000 155556664 788875 899999998766543
No 435
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=41.15 E-value=1.1e+02 Score=23.08 Aligned_cols=98 Identities=8% Similarity=0.042 Sum_probs=57.6
Q ss_pred hHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhC-CCCeEEcCCCCCHHHHHH
Q 018508 74 ESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAAT-GTPAILRLPESCPTWAKK 152 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~-g~~~iVRV~~~~~~~i~~ 152 (355)
..+++.|..-... +..-.+..+..+.+....+|.|+ +.+ .+--++...++.. . ..++++=....+...+.+
T Consensus 32 ~~l~~~L~~~g~~--v~~~~~~~~al~~l~~~~~dlvi--~~~--~~g~~~~~~l~~~--~~~~~ii~ls~~~~~~~~~~ 103 (137)
T 2pln_A 32 GEIEKGLNVKGFM--ADVTESLEDGEYLMDIRNYDLVM--VSD--KNALSFVSRIKEK--HSSIVVLVSSDNPTSEEEVH 103 (137)
T ss_dssp HHHHHHHHHTTCE--EEEESCHHHHHHHHHHSCCSEEE--ECS--TTHHHHHHHHHHH--STTSEEEEEESSCCHHHHHH
T ss_pred HHHHHHHHHcCcE--EEEeCCHHHHHHHHHcCCCCEEE--EcC--ccHHHHHHHHHhc--CCCccEEEEeCCCCHHHHHH
Confidence 4566777653322 22222334456667777899888 332 2222333334332 3 455566556666778889
Q ss_pred HHhcCCCeEeecCCCCHHHHHHHHHHc
Q 018508 153 ALDLGPQGVMFPMIDSPEAAKEAVSYC 179 (355)
Q Consensus 153 aLdaGa~GImvP~Vesaeea~~vv~a~ 179 (355)
+++.|+++++.--+.+.+++...++.+
T Consensus 104 ~~~~g~~~~l~kP~~~~~~l~~~i~~~ 130 (137)
T 2pln_A 104 AFEQGADDYIAKPYRSIKALVARIEAR 130 (137)
T ss_dssp HHHTTCSEEEESSCSCHHHHHHHHHHH
T ss_pred HHHcCCceeeeCCCCCHHHHHHHHHHH
Confidence 999999987643332778887777655
No 436
>3rjt_A Lipolytic protein G-D-S-L family; PSI-biology, midwest center for structural genomics, MCSG, H; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=41.03 E-value=41 Score=27.78 Aligned_cols=59 Identities=15% Similarity=0.086 Sum_probs=39.0
Q ss_pred HHHHHHHHHH-hc-cCCccEEEEChhhHHhhcCCCC----CCCCHHHHHHHHHHHHHHHhCCCce
Q 018508 222 EEGVKRAEDI-AA-VDGVDCVQMGPLDLSASMGYLW----DPGHRKVREMMRVAEKGVLGGGKAY 280 (355)
Q Consensus 222 ~~av~nieeI-aa-vpgVD~l~iGp~DLs~slG~~~----~~~~p~v~~ai~~iv~aa~a~g~~~ 280 (355)
...+..+++. .. -|.+-.|++|.||+........ ...-..+...+.++++.+++++.++
T Consensus 69 ~~~~~~~~~~~~~~~pd~vvi~~G~ND~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~v 133 (216)
T 3rjt_A 69 ADVARRWEDDVMALQPDYVSLMIGVNDVWRQFDMPLVVERHVGIDEYRDTLRHLVATTKPRVREM 133 (216)
T ss_dssp HHHHHHHHHHTGGGCCSEEEEECCHHHHHHHHHSTTCGGGCCCHHHHHHHHHHHHHHHGGGSSEE
T ss_pred HHHHHHHHhHHhhcCCCEEEEEeeccccchhhccccccccCCCHHHHHHHHHHHHHHHHhcCCeE
Confidence 3455666543 33 4667788889999987653211 1224567888999999999886653
No 437
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=40.96 E-value=91 Score=30.33 Aligned_cols=102 Identities=10% Similarity=0.038 Sum_probs=64.2
Q ss_pred chHHHHHHHcCCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHh-C-CCCeEEcCCCCCHHHH
Q 018508 73 PESLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAA-T-GTPAILRLPESCPTWA 150 (355)
Q Consensus 73 ~n~lk~~L~~G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~-~-g~~~iVRV~~~~~~~i 150 (355)
+..+++.-..|-+ .++....++...+.+.-..+|.|++=+.+ .+....++..++. . ...+++|+++ ....
T Consensus 37 ~~~v~~~~~~g~~--vi~GDat~~~~L~~agi~~A~~viv~~~~----~~~n~~i~~~ar~~~p~~~Iiara~~--~~~~ 108 (413)
T 3l9w_A 37 PDHIETLRKFGMK--VFYGDATRMDLLESAGAAKAEVLINAIDD----PQTNLQLTEMVKEHFPHLQIIARARD--VDHY 108 (413)
T ss_dssp HHHHHHHHHTTCC--CEESCTTCHHHHHHTTTTTCSEEEECCSS----HHHHHHHHHHHHHHCTTCEEEEEESS--HHHH
T ss_pred HHHHHHHHhCCCe--EEEcCCCCHHHHHhcCCCccCEEEECCCC----hHHHHHHHHHHHHhCCCCeEEEEECC--HHHH
Confidence 4444444344544 24446677888887777778888886654 3334444444433 3 3478999886 5667
Q ss_pred HHHHhcCCCeEeecCCCCHHHH-HHHHHHcCCC
Q 018508 151 KKALDLGPQGVMFPMIDSPEAA-KEAVSYCRFP 182 (355)
Q Consensus 151 ~~aLdaGa~GImvP~Vesaeea-~~vv~a~~~p 182 (355)
..+..+|++-|+-|..+++.++ +.+...+..+
T Consensus 109 ~~L~~~Gad~Vi~~~~~~a~~la~~~L~~lg~~ 141 (413)
T 3l9w_A 109 IRLRQAGVEKPERETFEGALKTGRLALESLGLG 141 (413)
T ss_dssp HHHHHTTCSSCEETTHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHCCCCEEECccHHHHHHHHHHHHHHcCCC
Confidence 7778899999999888766664 3444444443
No 438
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=40.81 E-value=1.2e+02 Score=28.21 Aligned_cols=76 Identities=21% Similarity=0.200 Sum_probs=50.7
Q ss_pred HHHHHhhhcCCcEEEEeCCCC---CCCHHHHHHHHHHH-Hh-CCCCeEEcCCCCCHHH----HHHHHhcCCCeEee--cC
Q 018508 97 TLAEISGLAGYDFVVVDMEHG---PGGISDALACLHAL-AA-TGTPAILRLPESCPTW----AKKALDLGPQGVMF--PM 165 (355)
Q Consensus 97 ~~~e~aa~~G~D~vilDlEh~---~~~~~~a~~~i~a~-~~-~g~~~iVRV~~~~~~~----i~~aLdaGa~GImv--P~ 165 (355)
..++.+...|.|.|++=---| ..+.++-.++++.+ +. .+.++++=+...+... .+.+.++|+++||+ |.
T Consensus 33 ~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~ 112 (313)
T 3dz1_A 33 RLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRAKSMQVIVGVSAPGFAAMRRLARLSMDAGAAGVMIAPPP 112 (313)
T ss_dssp HHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHCTTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCT
T ss_pred HHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHcCCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEECCCC
Confidence 456777789999999875443 45666655655543 22 4577888888877643 56788899999876 44
Q ss_pred C-CCHHHH
Q 018508 166 I-DSPEAA 172 (355)
Q Consensus 166 V-esaeea 172 (355)
. -|.+++
T Consensus 113 ~~~s~~~l 120 (313)
T 3dz1_A 113 SLRTDEQI 120 (313)
T ss_dssp TCCSHHHH
T ss_pred CCCCHHHH
Confidence 2 255554
No 439
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=40.50 E-value=1.2e+02 Score=27.98 Aligned_cols=76 Identities=16% Similarity=0.141 Sum_probs=50.5
Q ss_pred HHHHHhhhcCCcEEEEeC---CCCCCCHHHHHHHHHHHH---hCCCCeEEcCCCCCHHH----HHHHHhcCCCeEee--c
Q 018508 97 TLAEISGLAGYDFVVVDM---EHGPGGISDALACLHALA---ATGTPAILRLPESCPTW----AKKALDLGPQGVMF--P 164 (355)
Q Consensus 97 ~~~e~aa~~G~D~vilDl---Eh~~~~~~~a~~~i~a~~---~~g~~~iVRV~~~~~~~----i~~aLdaGa~GImv--P 164 (355)
..++.+...|.|.+++=- |-...+.++-.+.++.+. ....++++=+...+... .+.+-++|+++||+ |
T Consensus 26 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg~~~t~~ai~la~~a~~~Gadavlv~~P 105 (291)
T 3a5f_A 26 ELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIAGTGSNNTAASIAMSKWAESIGVDGLLVITP 105 (291)
T ss_dssp HHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 356667788999998866 333456666666655432 34578899998877643 46678899999765 5
Q ss_pred CCC--CHHHH
Q 018508 165 MID--SPEAA 172 (355)
Q Consensus 165 ~Ve--saeea 172 (355)
.-. |.+++
T Consensus 106 ~y~~~s~~~l 115 (291)
T 3a5f_A 106 YYNKTTQKGL 115 (291)
T ss_dssp CSSCCCHHHH
T ss_pred CCCCCCHHHH
Confidence 543 44443
No 440
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=40.38 E-value=53 Score=29.23 Aligned_cols=85 Identities=18% Similarity=0.117 Sum_probs=50.9
Q ss_pred HHHHHHHc-CCcEEEEEEecCCH-HHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHH
Q 018508 75 SLKYRLQS-NETLYGLFLLSFSP-TLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKK 152 (355)
Q Consensus 75 ~lk~~L~~-G~~~~gl~v~~~sp-~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~ 152 (355)
.+-+.|+. -+..+..-+.+.+| ..++.+..+|+|.|.+=.||.+.+ .....++.++..|..+.|=++...+....+
T Consensus 52 ~~v~~lr~~~~~~~~vhlmv~dp~~~i~~~~~aGadgv~vh~e~~~~~--~~~~~~~~i~~~g~~~gv~~~p~t~~e~~~ 129 (230)
T 1tqj_A 52 LIVDAIRPLTKKTLDVHLMIVEPEKYVEDFAKAGADIISVHVEHNASP--HLHRTLCQIRELGKKAGAVLNPSTPLDFLE 129 (230)
T ss_dssp HHHHHHGGGCCSEEEEEEESSSGGGTHHHHHHHTCSEEEEECSTTTCT--THHHHHHHHHHTTCEEEEEECTTCCGGGGT
T ss_pred HHHHHHHhhcCCcEEEEEEccCHHHHHHHHHHcCCCEEEECcccccch--hHHHHHHHHHHcCCcEEEEEeCCCcHHHHH
Confidence 34444543 23345533444666 367999999999999999964432 345566667677777766666555433222
Q ss_pred HHhcCCCeE
Q 018508 153 ALDLGPQGV 161 (355)
Q Consensus 153 aLdaGa~GI 161 (355)
.+..+++-|
T Consensus 130 ~~~~~~D~v 138 (230)
T 1tqj_A 130 YVLPVCDLI 138 (230)
T ss_dssp TTGGGCSEE
T ss_pred HHHhcCCEE
Confidence 233366654
No 441
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A*
Probab=40.35 E-value=33 Score=28.30 Aligned_cols=53 Identities=15% Similarity=0.134 Sum_probs=37.4
Q ss_pred HHHHHHHHHHhc--cCCccEEEEChhhHHhhcCCCCCCCCHHHHHHHHHHHHHHHhCCCce
Q 018508 222 EEGVKRAEDIAA--VDGVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVAEKGVLGGGKAY 280 (355)
Q Consensus 222 ~~av~nieeIaa--vpgVD~l~iGp~DLs~slG~~~~~~~p~v~~ai~~iv~aa~a~g~~~ 280 (355)
...+..+++... -|.+-.|.+|.||+.. + ..-.++...++++++.+++++.++
T Consensus 48 ~~~~~~~~~~~~~~~pd~Vii~~G~ND~~~--~----~~~~~~~~~l~~li~~~~~~~~~v 102 (190)
T 1ivn_A 48 QQGLARLPALLKQHQPRWVLVELGGNDGLR--G----FQPQQTEQTLRQILQDVKAANAEP 102 (190)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEECCTTTTSS--S----CCHHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHhcCCCEEEEEeecccccc--C----CCHHHHHHHHHHHHHHHHHcCCCE
Confidence 356666766542 4677788889999853 1 223567888999999999877553
No 442
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=39.63 E-value=68 Score=30.38 Aligned_cols=70 Identities=13% Similarity=0.046 Sum_probs=48.8
Q ss_pred EEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcC-CCCCHHHHHHHHhcCCCeEeec
Q 018508 88 GLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRL-PESCPTWAKKALDLGPQGVMFP 164 (355)
Q Consensus 88 gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV-~~~~~~~i~~aLdaGa~GImvP 164 (355)
-+-+-..+.+.++.+..+|+|.|.+|- ++.+++++.+..++ + .+.+=+ .+.....+....+.|+|.|.+=
T Consensus 209 kIeVEv~tl~e~~eAl~aGaDiImLDn----~s~~~l~~av~~~~--~-~v~leaSGGIt~~~i~~~A~tGVD~IsvG 279 (300)
T 3l0g_A 209 YIAIECDNISQVEESLSNNVDMILLDN----MSISEIKKAVDIVN--G-KSVLEVSGCVNIRNVRNIALTGVDYISIG 279 (300)
T ss_dssp CEEEEESSHHHHHHHHHTTCSEEEEES----CCHHHHHHHHHHHT--T-SSEEEEESSCCTTTHHHHHTTTCSEEECG
T ss_pred CEEEEECCHHHHHHHHHcCCCEEEECC----CCHHHHHHHHHhhc--C-ceEEEEECCCCHHHHHHHHHcCCCEEEeC
Confidence 345566788888889999999999996 56677777766543 2 122222 2345667888889999988763
No 443
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=39.59 E-value=1.1e+02 Score=26.77 Aligned_cols=65 Identities=11% Similarity=-0.012 Sum_probs=40.2
Q ss_pred HHHHHHhhhcCCcEEEE-eCCC-C---CCCHHHHHHHHHHHHhCCCCeEEcCCCCC-HHHHHHHHhcCCCeEeec
Q 018508 96 PTLAEISGLAGYDFVVV-DMEH-G---PGGISDALACLHALAATGTPAILRLPESC-PTWAKKALDLGPQGVMFP 164 (355)
Q Consensus 96 p~~~e~aa~~G~D~vil-DlEh-~---~~~~~~a~~~i~a~~~~g~~~iVRV~~~~-~~~i~~aLdaGa~GImvP 164 (355)
.+.++.+...|++.|++ +... + ..+.+....+.. ..+.++++ ..+.. +..+.+++..|++||++=
T Consensus 154 ~e~~~~~~~~G~~~i~~~~~~~~g~~~g~~~~~~~~l~~---~~~ipvia-~GGI~~~~d~~~~~~~Gadgv~vG 224 (253)
T 1thf_D 154 RDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRP---LTTLPIIA-SGGAGKMEHFLEAFLAGADAALAA 224 (253)
T ss_dssp HHHHHHHHHTTCSEEEEEETTTTTSCSCCCHHHHHHHGG---GCCSCEEE-ESCCCSHHHHHHHHHTTCSEEEES
T ss_pred HHHHHHHHHCCCCEEEEEeccCCCCCCCCCHHHHHHHHH---hcCCCEEE-ECCCCCHHHHHHHHHcCChHHHHH
Confidence 45678888999998776 3332 1 234444333322 23444333 34444 588999999999998875
No 444
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=39.53 E-value=1.1e+02 Score=28.25 Aligned_cols=147 Identities=12% Similarity=0.122 Sum_probs=77.5
Q ss_pred HHHHhhhcCCcEEEEeCCCC---CCCHHHHHHHHHHH---HhCCCCeEEcCCCCCHHH----HHHHHhcCCCeEee--cC
Q 018508 98 LAEISGLAGYDFVVVDMEHG---PGGISDALACLHAL---AATGTPAILRLPESCPTW----AKKALDLGPQGVMF--PM 165 (355)
Q Consensus 98 ~~e~aa~~G~D~vilDlEh~---~~~~~~a~~~i~a~---~~~g~~~iVRV~~~~~~~----i~~aLdaGa~GImv--P~ 165 (355)
.++.+...|.|.+++=.--| ..+.++-.++++.+ -..+.++++=+...+... .+.+-++|+++||+ |.
T Consensus 28 lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~ 107 (292)
T 3daq_A 28 HVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQAKALGADAIMLITPY 107 (292)
T ss_dssp HHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred HHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHHcCCCEEEECCCC
Confidence 55677789999999875444 35566655555543 234578899888877653 56788899999764 54
Q ss_pred C--CCHHHHH----HHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEEccHHHHHHHHHHhc-cCCcc
Q 018508 166 I--DSPEAAK----EAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKRAEDIAA-VDGVD 238 (355)
Q Consensus 166 V--esaeea~----~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mIET~~av~nieeIaa-vpgVD 238 (355)
- -|.+++. .+.+++.-| .-. +..| .| .+.....+-+....+...|+..=|+..-+.++.++.+ .++-+
T Consensus 108 y~~~~~~~l~~~f~~ia~a~~lP-iil--Yn~P-~~-tg~~l~~~~~~~La~~pnivgiK~ssgd~~~~~~~~~~~~~~~ 182 (292)
T 3daq_A 108 YNKTNQRGLVKHFEAIADAVKLP-VVL--YNVP-SR-TNMTIEPETVEILSQHPYIVALKDATNDFEYLEEVKKRIDTNS 182 (292)
T ss_dssp SSCCCHHHHHHHHHHHHHHHCSC-EEE--EECH-HH-HSCCCCHHHHHHHHTSTTEEEEEECCCCHHHHHHHHTTSCTTT
T ss_pred CCCCCHHHHHHHHHHHHHhCCCC-EEE--Eecc-cc-cCCCCCHHHHHHHhcCCCEEEEEeCCCCHHHHHHHHHHCCCCC
Confidence 3 3445543 334443222 100 0000 01 1111112221111111224555556555777777774 34312
Q ss_pred -EEEEChhhHHh
Q 018508 239 -CVQMGPLDLSA 249 (355)
Q Consensus 239 -~l~iGp~DLs~ 249 (355)
.++.|..++..
T Consensus 183 f~v~~G~d~~~~ 194 (292)
T 3daq_A 183 FALYSGNDDNVV 194 (292)
T ss_dssp SEEEESCGGGHH
T ss_pred EEEEECCHHHHH
Confidence 46667766544
No 445
>3luf_A Two-component system response regulator/ggdef domain protein; structural genomics, ASA_2441, PSI-2, protein structure initiative; HET: MSE; 1.76A {Aeromonas salmonicida} PDB: 3mf4_A*
Probab=39.42 E-value=2e+02 Score=25.29 Aligned_cols=99 Identities=12% Similarity=-0.053 Sum_probs=54.5
Q ss_pred HHHHHHHcCCcEEEEEEecCCH-HHHHHhhhcC-CcEEEEeCCCCCCCHHHHHHHHHHHHhC-CCCeEEcCCCCCHHHHH
Q 018508 75 SLKYRLQSNETLYGLFLLSFSP-TLAEISGLAG-YDFVVVDMEHGPGGISDALACLHALAAT-GTPAILRLPESCPTWAK 151 (355)
Q Consensus 75 ~lk~~L~~G~~~~gl~v~~~sp-~~~e~aa~~G-~D~vilDlEh~~~~~~~a~~~i~a~~~~-g~~~iVRV~~~~~~~i~ 151 (355)
.++..|......+. ...+. +..+.+.... +|.|++|+.=...+--++...++..... ..++++=....+.....
T Consensus 139 ~l~~~L~~~~~~v~---~a~~~~eal~~l~~~~~~dlvllD~~mP~~dG~~l~~~lr~~~~~~~~~ii~~s~~~~~~~~~ 215 (259)
T 3luf_A 139 RTMAQLRKQLLQVH---EASHAREALATLEQHPAIRLVLVDYYMPEIDGISLVRMLRERYSKQQLAIIGISVSDKRGLSA 215 (259)
T ss_dssp HHHHHHHTTTCEEE---EESSHHHHHHHHHHCTTEEEEEECSCCSSSCHHHHHHHHHHHCCTTTSEEEEEECSSSSSHHH
T ss_pred HHHHHHHHcCcEEE---EeCCHHHHHHHHhcCCCCCEEEEcCCCCCCCHHHHHHHHHhccCCCCCeEEEEEccCCHHHHH
Confidence 34455554333322 23344 4555565554 8999999986544433444444432211 23333333334455678
Q ss_pred HHHhcCCCeEeecCCCCHHHHHHHHH
Q 018508 152 KALDLGPQGVMFPMIDSPEAAKEAVS 177 (355)
Q Consensus 152 ~aLdaGa~GImvP~Vesaeea~~vv~ 177 (355)
+++++|+++.+ +|=-+.+++...++
T Consensus 216 ~a~~~Ga~~yl-~KP~~~~~L~~~i~ 240 (259)
T 3luf_A 216 RYLKQGANDFL-NQPFEPEELQCRVS 240 (259)
T ss_dssp HHHHTTCSEEE-ESSCCHHHHHHHHH
T ss_pred HHHhcChhheE-cCCCCHHHHHHHHH
Confidence 89999999865 44456777754443
No 446
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=39.37 E-value=1.3e+02 Score=28.40 Aligned_cols=91 Identities=11% Similarity=-0.001 Sum_probs=55.9
Q ss_pred EEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCC--------CCH----HHHHHHHHHHHhCCCCeEEcCCCCC-------
Q 018508 86 LYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGP--------GGI----SDALACLHALAATGTPAILRLPESC------- 146 (355)
Q Consensus 86 ~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~--------~~~----~~a~~~i~a~~~~g~~~iVRV~~~~------- 146 (355)
.+..|++.. ..++.+..+|.|.|-+=.--+. .+. +.+...++.++..|..+ ++.-.+
T Consensus 91 ~i~~l~~~~--~~i~~a~~~g~~~v~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~v--~~~~~~~~~~~~~ 166 (337)
T 3ble_A 91 EILGFVDGN--KTVDWIKDSGAKVLNLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLKI--NVYLEDWSNGFRN 166 (337)
T ss_dssp EEEEESSTT--HHHHHHHHHTCCEEEEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCEE--EEEEETHHHHHHH
T ss_pred eEEEEccch--hhHHHHHHCCCCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEE--EEEEEECCCCCcC
Confidence 444554433 3788888888888544221111 122 34445556666666653 433222
Q ss_pred -HH----HHHHHHhcCCCeEeecC---CCCHHHHHHHHHHcC
Q 018508 147 -PT----WAKKALDLGPQGVMFPM---IDSPEAAKEAVSYCR 180 (355)
Q Consensus 147 -~~----~i~~aLdaGa~GImvP~---Vesaeea~~vv~a~~ 180 (355)
+. .++++.++|++.|.++- +-+|+++.++++.++
T Consensus 167 ~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~ 208 (337)
T 3ble_A 167 SPDYVKSLVEHLSKEHIERIFLPDTLGVLSPEETFQGVDSLI 208 (337)
T ss_dssp CHHHHHHHHHHHHTSCCSEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCcCHHHHHHHHHHHH
Confidence 22 35678889999999986 578999999998875
No 447
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=39.30 E-value=1.1e+02 Score=27.29 Aligned_cols=90 Identities=18% Similarity=0.132 Sum_probs=50.5
Q ss_pred chHHHHHHHc-CCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCC--CC--C-HHHHHHHHHHHH-hCCCCeEEcCCCC
Q 018508 73 PESLKYRLQS-NETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHG--PG--G-ISDALACLHALA-ATGTPAILRLPES 145 (355)
Q Consensus 73 ~n~lk~~L~~-G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~--~~--~-~~~a~~~i~a~~-~~g~~~iVRV~~~ 145 (355)
...+.+.+++ |-..+-+..+...++.++.+...+.+|+.+.---+ .. . .....+.++.++ ..+.+++| --+.
T Consensus 132 ~~~~~~~~~~~g~~~i~~~a~~t~~e~~~~~~~~~~g~v~~~s~~G~tG~~~~~~~~~~~~i~~v~~~~~~pI~v-gGGI 210 (262)
T 1rd5_A 132 AHSLWSEAKNNNLELVLLTTPAIPEDRMKEITKASEGFVYLVSVNGVTGPRANVNPRVESLIQEVKKVTNKPVAV-GFGI 210 (262)
T ss_dssp HHHHHHHHHHTTCEECEEECTTSCHHHHHHHHHHCCSCEEEECSSCCBCTTSCBCTHHHHHHHHHHHHCSSCEEE-ESCC
T ss_pred HHHHHHHHHHcCCceEEEECCCCCHHHHHHHHhcCCCeEEEecCCCCCCCCcCCCchHHHHHHHHHhhcCCeEEE-ECCc
Confidence 4455555553 43433333344556676776666667776653211 11 1 123334444443 23555555 4455
Q ss_pred C-HHHHHHHHhcCCCeEee
Q 018508 146 C-PTWAKKALDLGPQGVMF 163 (355)
Q Consensus 146 ~-~~~i~~aLdaGa~GImv 163 (355)
. +..+..++.+||+||++
T Consensus 211 ~~~e~~~~~~~~GAdgvvV 229 (262)
T 1rd5_A 211 SKPEHVKQIAQWGADGVII 229 (262)
T ss_dssp CSHHHHHHHHHTTCSEEEE
T ss_pred CCHHHHHHHHHcCCCEEEE
Confidence 5 88999999999999886
No 448
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=39.09 E-value=1.3e+02 Score=27.99 Aligned_cols=79 Identities=19% Similarity=0.171 Sum_probs=52.6
Q ss_pred HHHHHhhhcCCcEEEEeCCCC---CCCHHHHHHHHHHHH---hCCCCeEEcCCCCCHHH----HHHHHhcCCCeEee--c
Q 018508 97 TLAEISGLAGYDFVVVDMEHG---PGGISDALACLHALA---ATGTPAILRLPESCPTW----AKKALDLGPQGVMF--P 164 (355)
Q Consensus 97 ~~~e~aa~~G~D~vilDlEh~---~~~~~~a~~~i~a~~---~~g~~~iVRV~~~~~~~----i~~aLdaGa~GImv--P 164 (355)
..++.+...|.|.+++=---| ..+.++-.++++.+. ..+.++++=+...+... .+.+.++|+++||+ |
T Consensus 40 ~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 119 (304)
T 3l21_A 40 RLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGAGTYDTAHSIRLAKACAAEGAHGLLVVTP 119 (304)
T ss_dssp HHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCC
Confidence 356777789999999875555 356666666665432 34578889888877643 57788899999764 4
Q ss_pred CCC--CHHHHHHH
Q 018508 165 MID--SPEAAKEA 175 (355)
Q Consensus 165 ~Ve--saeea~~v 175 (355)
+-. |.+++.+-
T Consensus 120 ~y~~~s~~~l~~~ 132 (304)
T 3l21_A 120 YYSKPPQRGLQAH 132 (304)
T ss_dssp CSSCCCHHHHHHH
T ss_pred CCCCCCHHHHHHH
Confidence 432 45555433
No 449
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=38.80 E-value=93 Score=29.64 Aligned_cols=77 Identities=18% Similarity=0.118 Sum_probs=52.5
Q ss_pred HHHHHhhhcCCcEEEEeCCC---CCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHH----HHHHHhcCCCeEee--cCCC
Q 018508 97 TLAEISGLAGYDFVVVDMEH---GPGGISDALACLHALAATGTPAILRLPESCPTW----AKKALDLGPQGVMF--PMID 167 (355)
Q Consensus 97 ~~~e~aa~~G~D~vilDlEh---~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~----i~~aLdaGa~GImv--P~Ve 167 (355)
..++.+...|.|.|++=.-- ...+.++-.++++.....+.++++=+...+... .+.+-++|+++||+ |.-.
T Consensus 51 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~y~ 130 (344)
T 2hmc_A 51 RKGKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVERLVKAGIPVIVGTGAVNTASAVAHAVHAQKVGAKGLMVIPRVLS 130 (344)
T ss_dssp HHHHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHHHHHTTCCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCCSS
T ss_pred HHHHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCccC
Confidence 45566778899999887633 346666666666653345678899998887543 46678899999875 6542
Q ss_pred ---CHHHHH
Q 018508 168 ---SPEAAK 173 (355)
Q Consensus 168 ---saeea~ 173 (355)
|.+++.
T Consensus 131 ~~~s~~~l~ 139 (344)
T 2hmc_A 131 RGSVIAAQK 139 (344)
T ss_dssp STTCHHHHH
T ss_pred CCCCHHHHH
Confidence 455554
No 450
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=38.77 E-value=1.1e+02 Score=28.61 Aligned_cols=148 Identities=12% Similarity=0.102 Sum_probs=78.1
Q ss_pred HHHHhhhcCCcEEEEeCCCC---CCCHHHHHHHHHHHH---hCCCCeEEcCCCCCHHH----HHHHHhcCCCeEee--c-
Q 018508 98 LAEISGLAGYDFVVVDMEHG---PGGISDALACLHALA---ATGTPAILRLPESCPTW----AKKALDLGPQGVMF--P- 164 (355)
Q Consensus 98 ~~e~aa~~G~D~vilDlEh~---~~~~~~a~~~i~a~~---~~g~~~iVRV~~~~~~~----i~~aLdaGa~GImv--P- 164 (355)
.++.+...|.|.+++=.--| ..+.++-.++++.+. ....++++=+...+... .+.+-++|+++||+ |
T Consensus 37 lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~ 116 (318)
T 3qfe_A 37 YYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMAGVGAHSTRQVLEHINDASVAGANYVLVLPPA 116 (318)
T ss_dssp HHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCC
T ss_pred HHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCc
Confidence 56777789999999877433 456666666655432 34578899998877653 56788899999664 6
Q ss_pred CC---CCHHHHH----HHHHHcCCCCCCCCCCcccccccccCCCCccccccCCC-ceEEEEEEccHHHHHHHHHHhc-cC
Q 018508 165 MI---DSPEAAK----EAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEE-ELLIMCQVESEEGVKRAEDIAA-VD 235 (355)
Q Consensus 165 ~V---esaeea~----~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~-~i~vi~mIET~~av~nieeIaa-vp 235 (355)
.. .+.+++. .+.+++.-| .-. +..| .|..++....+.+.+..+ ...|+..=|+..-+.++.+|.+ .+
T Consensus 117 y~~kp~~~~~l~~~f~~ia~a~~lP-iil--Yn~P-~~t~g~~l~~~~~~~La~~~pnIvgiKdssgd~~~~~~~~~~~~ 192 (318)
T 3qfe_A 117 YFGKATTPPVIKSFFDDVSCQSPLP-VVI--YNFP-GVCNGIDLDSDMITTIARKNPNVVGVKLTCASVGKITRLAATLP 192 (318)
T ss_dssp C---CCCHHHHHHHHHHHHHHCSSC-EEE--EECC-C----CCCCHHHHHHHHHHCTTEEEEEESSCCHHHHHHHHHHSC
T ss_pred ccCCCCCHHHHHHHHHHHHhhCCCC-EEE--EeCC-cccCCCCCCHHHHHHHHhhCCCEEEEEeCCCCHHHHHHHHHhcC
Confidence 22 2566654 444444322 100 0000 010011112222211111 1124444466555777777764 33
Q ss_pred Ccc-EEEEChhhHHh
Q 018508 236 GVD-CVQMGPLDLSA 249 (355)
Q Consensus 236 gVD-~l~iGp~DLs~ 249 (355)
+-+ .++-|..++..
T Consensus 193 ~~~f~v~~G~d~~~l 207 (318)
T 3qfe_A 193 PAAFSVFGGQSDFLI 207 (318)
T ss_dssp GGGCEEEESCGGGHH
T ss_pred CCCEEEEEecHHHHH
Confidence 223 36667666554
No 451
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=38.45 E-value=1e+02 Score=27.46 Aligned_cols=72 Identities=10% Similarity=0.156 Sum_probs=43.9
Q ss_pred EEEEEecCCHH-HHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCH-HHHHHHHhcCCCeEee
Q 018508 87 YGLFLLSFSPT-LAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCP-TWAKKALDLGPQGVMF 163 (355)
Q Consensus 87 ~gl~v~~~sp~-~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~-~~i~~aLdaGa~GImv 163 (355)
+..-+...+|. .++.++.+|+|+|.+=.|... +....++.++..|..+.|=++...+ ..+...++ .++.|++
T Consensus 67 ~dvhLmv~~p~~~i~~~~~aGad~itvH~Ea~~----~~~~~i~~i~~~G~k~gval~p~t~~e~l~~~l~-~~D~Vl~ 140 (228)
T 3ovp_A 67 FDMHMMVSKPEQWVKPMAVAGANQYTFHLEATE----NPGALIKDIRENGMKVGLAIKPGTSVEYLAPWAN-QIDMALV 140 (228)
T ss_dssp EEEEEECSCGGGGHHHHHHHTCSEEEEEGGGCS----CHHHHHHHHHHTTCEEEEEECTTSCGGGTGGGGG-GCSEEEE
T ss_pred EEEEEEeCCHHHHHHHHHHcCCCEEEEccCCch----hHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHHhc-cCCeEEE
Confidence 44333355554 678899999999999766543 3455666666677766666665443 23444443 2555543
No 452
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=38.27 E-value=1.2e+02 Score=27.97 Aligned_cols=77 Identities=16% Similarity=0.140 Sum_probs=51.6
Q ss_pred HHHHHhhhcCCcEEEEeCCCC---CCCHHHHHHHHHHHH---hCCCCeEEcCCCCCHHH----HHHHHhcCCCeEee--c
Q 018508 97 TLAEISGLAGYDFVVVDMEHG---PGGISDALACLHALA---ATGTPAILRLPESCPTW----AKKALDLGPQGVMF--P 164 (355)
Q Consensus 97 ~~~e~aa~~G~D~vilDlEh~---~~~~~~a~~~i~a~~---~~g~~~iVRV~~~~~~~----i~~aLdaGa~GImv--P 164 (355)
..++.+...|.|.+++=---| ..+.++-.++++.+. ....++++=+...+... .+.+-++|+++||+ |
T Consensus 25 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 104 (294)
T 2ehh_A 25 NLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTGGNATHEAVHLTAHAKEVGADGALVVVP 104 (294)
T ss_dssp HHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 456777789999998866444 356666666555432 34577888888877643 46778899999765 5
Q ss_pred CC--CCHHHHH
Q 018508 165 MI--DSPEAAK 173 (355)
Q Consensus 165 ~V--esaeea~ 173 (355)
.- -|.+++.
T Consensus 105 ~y~~~s~~~l~ 115 (294)
T 2ehh_A 105 YYNKPTQRGLY 115 (294)
T ss_dssp CSSCCCHHHHH
T ss_pred CCCCCCHHHHH
Confidence 43 2666654
No 453
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=38.25 E-value=2.9e+02 Score=26.85 Aligned_cols=73 Identities=18% Similarity=0.167 Sum_probs=48.7
Q ss_pred CccEEEEChhhHHhhcCCCCCCCCHHHHHHHHHHHHHHHhCCCceeecc-cC-------------Cc--------hhHHH
Q 018508 236 GVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVAEKGVLGGGKAYLAGF-AM-------------PH--------DAPLE 293 (355)
Q Consensus 236 gVD~l~iGp~DLs~slG~~~~~~~p~v~~ai~~iv~aa~a~g~~~~g~~-~~-------------d~--------~~a~~ 293 (355)
|+|.+-|-|+-+. . .+-++.++.+|+++|+++--++ ++ ++ +.++.
T Consensus 105 G~dklRINPGNig-------~------~~~~~~vv~~ak~~~~piRIGvN~GSL~~~ll~~yg~~~~eamVeSAl~~~~~ 171 (366)
T 3noy_A 105 GVHGIRINPGNIG-------K------EEIVREIVEEAKRRGVAVRIGVNSGSLEKDLLEKYGYPSAEALAESALRWSEK 171 (366)
T ss_dssp TCSEEEECHHHHS-------C------HHHHHHHHHHHHHHTCEEEEEEEGGGCCHHHHHHHSSCCHHHHHHHHHHHHHH
T ss_pred CCCeEEECCcccC-------c------hhHHHHHHHHHHHcCCCEEEecCCcCCCHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 8999999998662 1 1335678899999998752221 11 12 23566
Q ss_pred HHHCCCCEEEec---chHHHHHHHHHHHHHH
Q 018508 294 MKSRGYHMVSGA---VDVGLFRSAAVEDVAR 321 (355)
Q Consensus 294 ~~~~G~~~vs~~---~D~~ll~~~~~~~~~~ 321 (355)
+.++||+-+.++ +|+..+-++++...+.
T Consensus 172 ~e~~gf~~iviS~K~S~v~~~i~ayr~la~~ 202 (366)
T 3noy_A 172 FEKWGFTNYKVSIKGSDVLQNVRANLIFAER 202 (366)
T ss_dssp HHHTTCCCEEEEEECSSHHHHHHHHHHHHHH
T ss_pred HHhCCCCeEEEeeecCChHHHHHHHHHHHhc
Confidence 778999866555 5888888888765544
No 454
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=38.21 E-value=2.2e+02 Score=25.55 Aligned_cols=58 Identities=12% Similarity=-0.046 Sum_probs=34.7
Q ss_pred HHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCC-CCHHHHHHHHhcC
Q 018508 96 PTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPE-SCPTWAKKALDLG 157 (355)
Q Consensus 96 p~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~-~~~~~i~~aLdaG 157 (355)
..+++.+..+|+|.+++= + ...++....+..++..|..++.=+.. .....+..+...+
T Consensus 112 ~~f~~~~~~aG~dgvii~--d--l~~ee~~~~~~~~~~~gl~~i~l~~p~t~~~rl~~ia~~a 170 (262)
T 2ekc_A 112 EKFCRLSREKGIDGFIVP--D--LPPEEAEELKAVMKKYVLSFVPLGAPTSTRKRIKLICEAA 170 (262)
T ss_dssp HHHHHHHHHTTCCEEECT--T--CCHHHHHHHHHHHHHTTCEECCEECTTCCHHHHHHHHHHC
T ss_pred HHHHHHHHHcCCCEEEEC--C--CCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHhC
Confidence 467788999999977661 2 22466777777777777543221222 3344555555443
No 455
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=37.99 E-value=98 Score=28.22 Aligned_cols=28 Identities=11% Similarity=-0.165 Sum_probs=21.5
Q ss_pred EEEEecCCHHHHHHhhhcCCcEEEEeCC
Q 018508 88 GLFLLSFSPTLAEISGLAGYDFVVVDME 115 (355)
Q Consensus 88 gl~v~~~sp~~~e~aa~~G~D~vilDlE 115 (355)
.+.+...++..+..+...|+|+|.+.-|
T Consensus 127 ~l~~~v~~~~~~~~a~~~Gad~I~v~G~ 154 (297)
T 2zbt_A 127 PFVCGARNLGEALRRIAEGAAMIRTKGE 154 (297)
T ss_dssp CEEEEESSHHHHHHHHHTTCSEEEECCC
T ss_pred eEEeecCCHHHHHHHHHcCCCEEEEccc
Confidence 3445567888888889999999988743
No 456
>3mz2_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics; HET: MSE PE4; 1.55A {Parabacteroides distasonis}
Probab=37.91 E-value=1.1e+02 Score=28.19 Aligned_cols=81 Identities=15% Similarity=0.127 Sum_probs=53.8
Q ss_pred cCCHHHHHHhhhcCCcE----EEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEc-CCCCC--------HHHHHHHHhcCCC
Q 018508 93 SFSPTLAEISGLAGYDF----VVVDMEHGPGGISDALACLHALAATGTPAILR-LPESC--------PTWAKKALDLGPQ 159 (355)
Q Consensus 93 ~~sp~~~e~aa~~G~D~----vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVR-V~~~~--------~~~i~~aLdaGa~ 159 (355)
..++..++.+...|+++ .++..+..+ .-..++..+...|..++|= |+..+ ...++++++.|++
T Consensus 186 ~~~~~~l~~~~~~g~~~~~~~~~~~~~~~~----~~~~~V~~ah~~G~~V~vWTv~t~d~~~~~~~~~~~~~~L~~~GVD 261 (292)
T 3mz2_A 186 VKTKEAVQDYEDNGIPWSHIMAYVGPKITP----EVREVIDMLHERGVMCMISTAPSDDKLSTPESRAEAYRMIIRQGVD 261 (292)
T ss_dssp CCSHHHHHHHHHTTCCGGGEEEEEESSCCH----HHHHHHHHHHHTTBCEEEECTTTGGGSSSHHHHHHHHHHHHHTTCC
T ss_pred eCCHHHHHHHHHhCCChhheeeeecccccc----cCHHHHHHHHHCCCEEEEEeCCCcchhhhccccHHHHHHHHHcCCC
Confidence 34666666666667642 344444332 2345677777788877653 33332 3478999999999
Q ss_pred eEeecCCCCHHHHHHHHHHcC
Q 018508 160 GVMFPMIDSPEAAKEAVSYCR 180 (355)
Q Consensus 160 GImvP~Vesaeea~~vv~a~~ 180 (355)
||+- +.++.++++++..+
T Consensus 262 gIiT---D~P~~l~~~L~~~~ 279 (292)
T 3mz2_A 262 IIES---DRPIEVAEAISSLI 279 (292)
T ss_dssp EEEE---SCHHHHHHHHGGGS
T ss_pred EEEe---CCHHHHHHHHHHhc
Confidence 9985 88999988887654
No 457
>2dy3_A Alanine racemase; alpha/beta barrel, isomerase; HET: PLP; 2.10A {Corynebacterium glutamicum}
Probab=37.64 E-value=2.5e+02 Score=26.03 Aligned_cols=91 Identities=15% Similarity=0.047 Sum_probs=55.1
Q ss_pred hHHHHHHHcCCcEEEEEEec-----CCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCC-eEEcCCCCCH
Q 018508 74 ESLKYRLQSNETLYGLFLLS-----FSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTP-AILRLPESCP 147 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~-----~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~-~iVRV~~~~~ 147 (355)
+.+++++.. ..+..-+.. +++..++.+...|++.+- ....+++.....+ |.. .++=++...+
T Consensus 18 ~~~~~~~~~--~~l~~vvKanaYG~~~~~i~~~l~~~G~~~~~------vas~~E~~~~~~~----G~~~~il~~~~~~~ 85 (361)
T 2dy3_A 18 RVLKQMAGP--AKLMAVVKANAYNHGVEKVAPVIAAHGADAFG------VATLAEAMQLRDI----GISQEVLCWIWTPE 85 (361)
T ss_dssp HHHHHHHTT--SEEEEECHHHHHHTCHHHHHHHHHHTTCCEEE------ESSHHHHHHHHHT----TCCSEEEECCCCTT
T ss_pred HHHHHhCCC--cEEEEEEEecCcCCCHHHHHHHHHHCCCCEEE------EeEHHHHHHHHhc----CCCCCEEEECCCCH
Confidence 345555532 334444444 567788888888876543 2456666555432 332 3443455555
Q ss_pred HHHHHHHhcCCCeEeecCCCCHHHHHHHHHHcC
Q 018508 148 TWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCR 180 (355)
Q Consensus 148 ~~i~~aLdaGa~GImvP~Vesaeea~~vv~a~~ 180 (355)
..+..+++.+ | .+.|+|.++++++.+.+.
T Consensus 86 ~~~~~~~~~~---i-~~~vds~~~l~~l~~~a~ 114 (361)
T 2dy3_A 86 QDFRAAIDRN---I-DLAVISPAHAKALIETDA 114 (361)
T ss_dssp SCHHHHHTTT---C-EEEECSHHHHHHHHTSCC
T ss_pred HHHHHHHHcC---C-EEEECCHHHHHHHHHhCc
Confidence 5688888754 3 478999999999876543
No 458
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=37.59 E-value=1e+02 Score=28.70 Aligned_cols=143 Identities=13% Similarity=0.106 Sum_probs=79.8
Q ss_pred HHHHhhhcCCcEEEEeCCCC---CCCHHHHHHHHHHHH---hCCCCeEEcCCCCCHHH----HHHHHhcCCCeEee--cC
Q 018508 98 LAEISGLAGYDFVVVDMEHG---PGGISDALACLHALA---ATGTPAILRLPESCPTW----AKKALDLGPQGVMF--PM 165 (355)
Q Consensus 98 ~~e~aa~~G~D~vilDlEh~---~~~~~~a~~~i~a~~---~~g~~~iVRV~~~~~~~----i~~aLdaGa~GImv--P~ 165 (355)
.++.+...|.|.+++=---| ..+.++-.++++.+. ..+.++++=+...+... .+.+-++|+++||+ |.
T Consensus 34 lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~Py 113 (309)
T 3fkr_A 34 AVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTTSHYSTQVCAARSLRAQQLGAAMVMAMPPY 113 (309)
T ss_dssp HHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEECCSC
T ss_pred HHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEecCCchHHHHHHHHHHHHHcCCCEEEEcCCC
Confidence 45677788999988864333 356666555555432 34578899998877653 57788899999765 54
Q ss_pred C-----CCHHHHH----HHHHHcCCCCCCCCCCcccccccccCCCCcccccc-C--CCceEEEEEEccHHHHHHHHHHhc
Q 018508 166 I-----DSPEAAK----EAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSN-Y--EEELLIMCQVESEEGVKRAEDIAA 233 (355)
Q Consensus 166 V-----esaeea~----~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~-~--n~~i~vi~mIET~~av~nieeIaa 233 (355)
- -|.+++. .+.+++.-| .- =+.. +. .+.....+-+.+ + ..+ .+.+..|+..-+.++.++.+
T Consensus 114 y~~~~~~s~~~l~~~f~~va~a~~lP-ii--lYn~--P~-tg~~l~~~~~~~La~~~pn-IvgiK~~~~~~~~~~~~~~~ 186 (309)
T 3fkr_A 114 HGATFRVPEAQIFEFYARVSDAIAIP-IM--VQDA--PA-SGTALSAPFLARMAREIEQ-VAYFXIETPGAANKLRELIR 186 (309)
T ss_dssp BTTTBCCCHHHHHHHHHHHHHHCSSC-EE--EEEC--GG-GCCCCCHHHHHHHHHHSTT-EEEEEECSSSHHHHHHHHHH
T ss_pred CccCCCCCHHHHHHHHHHHHHhcCCC-EE--EEeC--CC-CCCCCCHHHHHHHHhhCCC-EEEEECCCcchHHHHHHHHH
Confidence 2 2566654 344444322 10 0010 01 112222222221 1 233 35666688766778888775
Q ss_pred c-C-CccEEEEChhhH
Q 018508 234 V-D-GVDCVQMGPLDL 247 (355)
Q Consensus 234 v-p-gVD~l~iGp~DL 247 (355)
. + .+..++-|..++
T Consensus 187 ~~~~~~~~~~~G~d~~ 202 (309)
T 3fkr_A 187 LGGDAIEGPWDGEEAI 202 (309)
T ss_dssp HHGGGCCEEEECGGGT
T ss_pred hcCCceeeecCCchHH
Confidence 3 2 233567787664
No 459
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=37.36 E-value=1.1e+02 Score=27.99 Aligned_cols=77 Identities=14% Similarity=0.112 Sum_probs=51.5
Q ss_pred HHHHHhhhcCCcEEEEeCCCC---CCCHHHHHHHHHHHH---hCCCCeEEcCCCCCHHH----HHHHHhcCCCeEee--c
Q 018508 97 TLAEISGLAGYDFVVVDMEHG---PGGISDALACLHALA---ATGTPAILRLPESCPTW----AKKALDLGPQGVMF--P 164 (355)
Q Consensus 97 ~~~e~aa~~G~D~vilDlEh~---~~~~~~a~~~i~a~~---~~g~~~iVRV~~~~~~~----i~~aLdaGa~GImv--P 164 (355)
..++.+...|.|.+++=---| ..+.++-.++++.+. ....++++=+...+... .+.+-++|+++||+ |
T Consensus 25 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 104 (289)
T 2yxg_A 25 ENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAGSNCTEEAIELSVFAEDVGADAVLSITP 104 (289)
T ss_dssp HHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 456777789999999865433 356666666555432 34577888888877643 46678899999765 5
Q ss_pred CC--CCHHHHH
Q 018508 165 MI--DSPEAAK 173 (355)
Q Consensus 165 ~V--esaeea~ 173 (355)
.- -|.+++.
T Consensus 105 ~y~~~s~~~l~ 115 (289)
T 2yxg_A 105 YYNKPTQEGLR 115 (289)
T ss_dssp CSSCCCHHHHH
T ss_pred CCCCCCHHHHH
Confidence 43 2556654
No 460
>3khd_A Pyruvate kinase; malaria, structural genomics, structural GE consortium, SGC, transferase; 2.70A {Plasmodium falciparum 3D7}
Probab=37.32 E-value=86 Score=31.95 Aligned_cols=90 Identities=17% Similarity=0.106 Sum_probs=57.1
Q ss_pred chHHHHHHHcCCcEEEEEEecCCHHHHH----HhhhcCCcEEEE---eC--CCCCCCHHHHHH-HHHHHHhCCCCeEE--
Q 018508 73 PESLKYRLQSNETLYGLFLLSFSPTLAE----ISGLAGYDFVVV---DM--EHGPGGISDALA-CLHALAATGTPAIL-- 140 (355)
Q Consensus 73 ~n~lk~~L~~G~~~~gl~v~~~sp~~~e----~aa~~G~D~vil---Dl--Eh~~~~~~~a~~-~i~a~~~~g~~~iV-- 140 (355)
...+|+.|.....-+.++..+-+++.++ ++.. .|.|++ || |-+......++. +++.++..|+++++
T Consensus 245 v~~~r~~l~~~g~~i~IIAKIE~~eav~nldeIl~~--sDGIMVARGDLgvEi~~e~vp~~Qk~iI~~c~~aGKPVi~AT 322 (520)
T 3khd_A 245 VRLIRNLLGPRGRHIKIIPKIENIEGIIHFDKILAE--SDGIMIARGDLGMEISPEKVFLAQKLMISKCNLQGKPIITAT 322 (520)
T ss_dssp HHHHHHHHTTTTTTSEEEEEECSHHHHHTHHHHHHH--SSCEEECHHHHTTTSCGGGHHHHHHHHHHHHHHHTCCEEECC
T ss_pred HHHHHHHHHhcCCCCcEEEEECCHHHHHhHHHHHHh--CCcEEEccccccccCCHHHHHHHHHHHHHHHHHcCCCeEEee
Confidence 4677888865444568888999988664 3333 588998 44 222234445554 56778888988874
Q ss_pred -------cCCCCCHHH---HHHHHhcCCCeEeec
Q 018508 141 -------RLPESCPTW---AKKALDLGPQGVMFP 164 (355)
Q Consensus 141 -------RV~~~~~~~---i~~aLdaGa~GImvP 164 (355)
+=|.+.... +..+.--|+|+||+.
T Consensus 323 QMLeSMi~~p~PTRAEvsDVanAVldGaDavMLS 356 (520)
T 3khd_A 323 QMLESMTKNPRPTRAEVTDVANAVLDGTDCVMLS 356 (520)
T ss_dssp CCCGGGGTCSSCCHHHHHHHHHHHHHTCSEEEES
T ss_pred hhhHHHhcCCCccHHHHHHHHHHHHhCCCEEEec
Confidence 434444443 344444599999993
No 461
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=37.28 E-value=1.3e+02 Score=27.89 Aligned_cols=79 Identities=16% Similarity=0.145 Sum_probs=52.4
Q ss_pred HHHHHhhhcCCcEEEEeCC---CCCCCHHHHHHHHHHHH---hCCCCeEEcCCCCCHHH----HHHHHhcCCCeEee--c
Q 018508 97 TLAEISGLAGYDFVVVDME---HGPGGISDALACLHALA---ATGTPAILRLPESCPTW----AKKALDLGPQGVMF--P 164 (355)
Q Consensus 97 ~~~e~aa~~G~D~vilDlE---h~~~~~~~a~~~i~a~~---~~g~~~iVRV~~~~~~~----i~~aLdaGa~GImv--P 164 (355)
..++.+...|.|.+++=-- -...+.++-.++++.+. ....++++=+...+... .+.+-++|+++||+ |
T Consensus 37 ~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P 116 (306)
T 1o5k_A 37 RLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAGTNSTEKTLKLVKQAEKLGANGVLVVTP 116 (306)
T ss_dssp HHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCCCccHHHHHHHHHHHHhcCCCEEEECCC
Confidence 3566777889999988663 33466666666665432 34578889998877643 46678899999765 5
Q ss_pred CC--CCHHHHHHH
Q 018508 165 MI--DSPEAAKEA 175 (355)
Q Consensus 165 ~V--esaeea~~v 175 (355)
.- -|.+++.+-
T Consensus 117 ~y~~~s~~~l~~~ 129 (306)
T 1o5k_A 117 YYNKPTQEGLYQH 129 (306)
T ss_dssp CSSCCCHHHHHHH
T ss_pred CCCCCCHHHHHHH
Confidence 43 255665433
No 462
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=37.18 E-value=90 Score=30.06 Aligned_cols=151 Identities=15% Similarity=0.078 Sum_probs=78.5
Q ss_pred CCHHHHHH-hhhcCCcEEEEeCCCC--------CCCHH-HHHHHHHHHH-hCCCCeEEcC--CCCCHHHHHHHHhcCCCe
Q 018508 94 FSPTLAEI-SGLAGYDFVVVDMEHG--------PGGIS-DALACLHALA-ATGTPAILRL--PESCPTWAKKALDLGPQG 160 (355)
Q Consensus 94 ~sp~~~e~-aa~~G~D~vilDlEh~--------~~~~~-~a~~~i~a~~-~~g~~~iVRV--~~~~~~~i~~aLdaGa~G 160 (355)
.+++.++. +...++|++.|++-.. ..+.. ...+.++.+. ..+.+++|.. ++.++..++++.++|+++
T Consensus 135 ~~~~~~~~av~~~~a~al~Ihln~~~~~~~p~g~~~~~~~~~~~i~~i~~~~~vPVivK~vG~g~s~~~A~~l~~aGad~ 214 (368)
T 3vkj_A 135 YGLKEFQDAIQMIEADAIAVHLNPAQEVFQPEGEPEYQIYALEKLRDISKELSVPIIVKESGNGISMETAKLLYSYGIKN 214 (368)
T ss_dssp CCHHHHHHHHHHTTCSEEEEECCHHHHHHSSSCCCBCBTHHHHHHHHHHTTCSSCEEEECSSSCCCHHHHHHHHHTTCCE
T ss_pred CCHHHHHHHHHHhcCCCeEEEecchhhhhCCCCCchhhHHHHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHhCCCCE
Confidence 35666655 4446899999997432 11221 3445566554 4688999994 335688899999999999
Q ss_pred EeecCC--CCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCc-c---ccccCCCceEEEEEEccHHHHHHHHHHhcc
Q 018508 161 VMFPMI--DSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDE-G---YLSNYEEELLIMCQVESEEGVKRAEDIAAV 234 (355)
Q Consensus 161 ImvP~V--esaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~-~---y~~~~n~~i~vi~mIET~~av~nieeIaav 234 (355)
|.|-.- .+..+++.....-. .+.. +..+ .-...||.+. . -....-.++.|++.=--..+.+-+..|+.
T Consensus 215 I~V~g~GGt~~~~iE~~R~~~~-~~~~-~~~~---~~~~~~g~pt~~~l~~v~~~~~~ipvia~GGI~~~~d~~kal~l- 288 (368)
T 3vkj_A 215 FDTSGQGGTNWIAIEMIRDIRR-GNWK-AESA---KNFLDWGVPTAASIMEVRYSVPDSFLVGSGGIRSGLDAAKAIAL- 288 (368)
T ss_dssp EECCCBTSBCHHHHHHHHHHHT-TCTH-HHHH---HHTTTCSCBHHHHHHHHHHHSTTCEEEEESSCCSHHHHHHHHHH-
T ss_pred EEEeCCCCCcccchhhhhcccc-cccc-hhhc---cccccccccHHHHHHHHHHHcCCCcEEEECCCCCHHHHHHHHHc-
Confidence 998331 23333333221100 0000 0000 0011233220 0 01111123566664333334455556664
Q ss_pred CCccEEEEChhhHHhhc
Q 018508 235 DGVDCVQMGPLDLSASM 251 (355)
Q Consensus 235 pgVD~l~iGp~DLs~sl 251 (355)
|-|++++|..=|...+
T Consensus 289 -GA~~v~ig~~~l~~~~ 304 (368)
T 3vkj_A 289 -GADIAGMALPVLKSAI 304 (368)
T ss_dssp -TCSEEEECHHHHHHHH
T ss_pred -CCCEEEEcHHHHHHHh
Confidence 8899999987665443
No 463
>2q0q_A ARYL esterase; SGNH hydrolase, oligomeric enzyme, acyl transfer, ARYL ester hydrolase; 1.50A {Mycobacterium smegmatis} PDB: 2q0s_A*
Probab=37.11 E-value=50 Score=27.55 Aligned_cols=51 Identities=18% Similarity=0.121 Sum_probs=36.5
Q ss_pred HHHHHHHHHhc--cC-CccEEEEChhhHHhhcCCCCCCCCHHHHHHHHHHHHHHHhCC
Q 018508 223 EGVKRAEDIAA--VD-GVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVAEKGVLGGG 277 (355)
Q Consensus 223 ~av~nieeIaa--vp-gVD~l~iGp~DLs~slG~~~~~~~p~v~~ai~~iv~aa~a~g 277 (355)
.++..++..+. -| .+-.|++|.||+....+. .-.++...++++++.+++++
T Consensus 69 ~~~~~l~~~l~~~~p~d~vvi~~G~ND~~~~~~~----~~~~~~~~l~~li~~~~~~~ 122 (216)
T 2q0q_A 69 NGASYLPSCLATHLPLDLVIIMLGTNDTKAYFRR----TPLDIALGMSVLVTQVLTSA 122 (216)
T ss_dssp BHHHHHHHHHHHHCSCSEEEEECCTGGGSGGGCC----CHHHHHHHHHHHHHHHHTCT
T ss_pred cHHHHHHHHHHhCCCCCEEEEEecCcccchhcCC----CHHHHHHHHHHHHHHHHHhc
Confidence 35666766553 35 677888899999654333 23467888999999999887
No 464
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=37.02 E-value=64 Score=30.21 Aligned_cols=72 Identities=14% Similarity=0.118 Sum_probs=45.1
Q ss_pred eEEEEEEccHHHHHHHHHHhccCCccEEEEChhhHHhhcCCCCCCCCHHHHHHHHHHHHHHHhC----CCceeecccCCc
Q 018508 213 LLIMCQVESEEGVKRAEDIAAVDGVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVAEKGVLGG----GKAYLAGFAMPH 288 (355)
Q Consensus 213 i~vi~mIET~~av~nieeIaavpgVD~l~iGp~DLs~slG~~~~~~~p~v~~ai~~iv~aa~a~----g~~~~g~~~~d~ 288 (355)
..+++-++|.+- +.+-+. .|+|+|.+++.+ |+. +.++++..+.. .+...|++ ++
T Consensus 198 ~~i~vev~tlee---~~~A~~-aGaD~I~ld~~~-------------~~~---l~~~v~~l~~~~~~~~I~ASGGI--t~ 255 (299)
T 2jbm_A 198 LKVEVECSSLQE---AVQAAE-AGADLVLLDNFK-------------PEE---LHPTATVLKAQFPSVAVEASGGI--TL 255 (299)
T ss_dssp SCEEEEESSHHH---HHHHHH-TTCSEEEEESCC-------------HHH---HHHHHHHHHHHCTTSEEEEESSC--CT
T ss_pred CeEEEecCCHHH---HHHHHH-cCCCEEEECCCC-------------HHH---HHHHHHHhhccCCCeeEEEECCC--CH
Confidence 457778888843 333333 389999997632 222 23333333321 12245555 67
Q ss_pred hhHHHHHHCCCCEEEecc
Q 018508 289 DAPLEMKSRGYHMVSGAV 306 (355)
Q Consensus 289 ~~a~~~~~~G~~~vs~~~ 306 (355)
+.++.+++.|.+.+++|+
T Consensus 256 ~ni~~~~~aGaD~i~vGs 273 (299)
T 2jbm_A 256 DNLPQFCGPHIDVISMGM 273 (299)
T ss_dssp TTHHHHCCTTCCEEECTH
T ss_pred HHHHHHHHCCCCEEEECh
Confidence 889999999999999986
No 465
>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12}
Probab=36.70 E-value=99 Score=27.93 Aligned_cols=63 Identities=14% Similarity=0.242 Sum_probs=29.7
Q ss_pred CchHHHHHHHcCC-cEEEEEEec---CCHHHH-------HHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCC
Q 018508 72 SPESLKYRLQSNE-TLYGLFLLS---FSPTLA-------EISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTP 137 (355)
Q Consensus 72 ~~n~lk~~L~~G~-~~~gl~v~~---~sp~~~-------e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~ 137 (355)
.||...+.|+.++ ..+|+.++. .+|... +.+...|++.++++.++. .+.-...++.+...+..
T Consensus 48 ~pn~~a~~l~~~~~~~Igvi~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~---~~~~~~~~~~l~~~~vd 121 (338)
T 3dbi_A 48 RPNLLARNLSAKSTQTLGLVVTNTLYHGIYFSELLFHAARMAEEKGRQLLLADGKHS---AEEERQAIQYLLDLRCD 121 (338)
T ss_dssp ------------CCSEEEEEECTTTTSTTHHHHHHHHHHHHHHHTTCEEEEEECTTS---HHHHHHHHHHHHHTTCS
T ss_pred CcCHHHHHhhhCCCCEEEEEecCCcccChhHHHHHHHHHHHHHHCCCEEEEEeCCCC---hHHHHHHHHHHHhCCCC
Confidence 5788888887665 588999874 555432 345678999988886543 23333344444333433
No 466
>3lg3_A Isocitrate lyase; conserved, CD, proteomics evidence (cytopl periplasmic), drug target functions; 1.40A {Yersinia pestis} SCOP: c.1.12.7 PDB: 1igw_A
Probab=36.65 E-value=1.6e+02 Score=29.25 Aligned_cols=131 Identities=15% Similarity=0.080 Sum_probs=77.5
Q ss_pred HHHHHhhhcCCcEEEEeCCCC------------CCCHHHHHHHHHHHH------hCCCCeEEcCCCC-------------
Q 018508 97 TLAEISGLAGYDFVVVDMEHG------------PGGISDALACLHALA------ATGTPAILRLPES------------- 145 (355)
Q Consensus 97 ~~~e~aa~~G~D~vilDlEh~------------~~~~~~a~~~i~a~~------~~g~~~iVRV~~~------------- 145 (355)
+.++.+..+|+-.|.|.=+-. ..+.+++..-|+++. .....++.|+...
T Consensus 171 ~tv~~~~~aGaaGi~IEDq~~~~KkCGh~~gk~lv~~~e~~~rI~Aa~~A~~~~~~d~~IiARTDa~aa~l~~s~~d~rD 250 (435)
T 3lg3_A 171 ELMKAMIEAGAAGVHFEDQLAAVKKCGHMGGKVLVPTQEAIQKLVAARLAADVLGVPTLLIARTDADAADLLTSDCDPYD 250 (435)
T ss_dssp HHHHHHHHHTCSEEEEESBCGGGCBCSTTCBCEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECTTTCCEESCCCCGGG
T ss_pred HHHHHHHHcCCEEEEEecCCCCccccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEEcCCcccccccccccccc
Confidence 456778889998877654321 135666666555542 1234466788742
Q ss_pred ------------------C-HHHHHH---HHhcCCCeEee-cCCCCHHHHHHHHHHcC--CCCCCCCCCcccccccccCC
Q 018508 146 ------------------C-PTWAKK---ALDLGPQGVMF-PMIDSPEAAKEAVSYCR--FPPSGVRGSAHTVVRASGYG 200 (355)
Q Consensus 146 ------------------~-~~~i~~---aLdaGa~GImv-P~Vesaeea~~vv~a~~--~pP~G~Rg~g~~~~ra~~~g 200 (355)
. ...|.| ..+ |||+|.+ |...+.+|++++++.++ +|- . .-.|+
T Consensus 251 ~~fi~G~r~~eG~y~~~~gld~AI~Ra~AY~~-GAD~if~E~~~~~~~ei~~f~~~v~~~~P~--~---------~La~~ 318 (435)
T 3lg3_A 251 REFITGDRTAEGFFRTRAGIEQAISRGLAYAP-YADLVWCETSTPDLALAKRFADAVHAQFPG--K---------LLAYN 318 (435)
T ss_dssp GGGEEEEECTTCCEEECCSHHHHHHHHHHHGG-GCSEEEECCSSCCHHHHHHHHHHHHHHSTT--C---------EEEEE
T ss_pred chhhcccccccccccccCCHHHHHHHHHHHHc-cCCEEEecCCCCCHHHHHHHHHHhccccCC--e---------EEEeC
Confidence 1 123444 345 9999999 99999999999999987 541 0 01122
Q ss_pred CCccccccCCCceEEEEEEccHHHHHH-HHHHhccCCccEEEEChhhHHh
Q 018508 201 IDEGYLSNYEEELLIMCQVESEEGVKR-AEDIAAVDGVDCVQMGPLDLSA 249 (355)
Q Consensus 201 ~~~~y~~~~n~~i~vi~mIET~~av~n-ieeIaavpgVD~l~iGp~DLs~ 249 (355)
..+.|.- ...+ +.+-+.+ .+|+++. |+..++++..=|..
T Consensus 319 ~sPsfnw--~~~~-------~d~~~~~f~~eLa~l-G~~~v~~~la~~ra 358 (435)
T 3lg3_A 319 CSPSFNW--KKNL-------TDQQIASFQDELSAM-GYKYQFITLAGIHS 358 (435)
T ss_dssp CCSSSCH--HHHS-------CHHHHHHHHHHHHHT-TEEEEEETTHHHHH
T ss_pred CCCCccc--cccC-------CHHHHHHHHHHHHHc-CCcEEEeCcHHHHH
Confidence 2211100 0000 4444444 5777765 89999998765543
No 467
>3i4e_A Isocitrate lyase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.69A {Burkholderia pseudomallei}
Probab=36.61 E-value=1.8e+02 Score=28.98 Aligned_cols=132 Identities=16% Similarity=0.120 Sum_probs=77.0
Q ss_pred HHHHHhhhcCCcEEEEeCCCC------------CCCHHHHHHHHHHHH----h--CCCCeEEcCCCCC------------
Q 018508 97 TLAEISGLAGYDFVVVDMEHG------------PGGISDALACLHALA----A--TGTPAILRLPESC------------ 146 (355)
Q Consensus 97 ~~~e~aa~~G~D~vilDlEh~------------~~~~~~a~~~i~a~~----~--~g~~~iVRV~~~~------------ 146 (355)
+.++.+..+|+-.|-|.=+-. ....+++..-|++++ . ....++.|+....
T Consensus 171 ~~vk~~~~aGaaGi~iEDq~~~~KkCGH~~gk~lv~~~e~v~rI~Aar~A~~~~g~d~~IiARTDa~~a~l~~s~~d~~d 250 (439)
T 3i4e_A 171 ELMKAMIEAGASGVHFEDQLASVKKCGHMGGKVLVPTREAVAKLTAARLAADVMGTPTVLVARTDAEAADLITSDIDDND 250 (439)
T ss_dssp HHHHHHHHHTCSEEEEESBCGGGCBCSTTCBCCBCCHHHHHHHHHHHHHHHHHHTCCCEEEEEECTTTCCEESCCCCTTT
T ss_pred HHHHHHHHcCCEEEEEeCCCCCccccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEEcCccccccccccccccc
Confidence 345677888988777654321 135666666555543 1 2344566876521
Q ss_pred --------------------HHHHHHH---HhcCCCeEee-cCCCCHHHHHHHHHHcC--CCCCCCCCCcccccccccCC
Q 018508 147 --------------------PTWAKKA---LDLGPQGVMF-PMIDSPEAAKEAVSYCR--FPPSGVRGSAHTVVRASGYG 200 (355)
Q Consensus 147 --------------------~~~i~~a---LdaGa~GImv-P~Vesaeea~~vv~a~~--~pP~G~Rg~g~~~~ra~~~g 200 (355)
...|.|+ .+ |||+|.+ |...+.++++++++.++ +|- ....|+
T Consensus 251 ~~fi~G~r~~eg~~~~~~gldeAI~Ra~AY~~-GAD~if~E~~~~~~eei~~f~~~v~~~~P~-----------~~l~~~ 318 (439)
T 3i4e_A 251 KPYLTGERTVEGFFRTKPGLEQAISRGLAYAP-YADLIWCETGKPDLEYAKKFAEAIHKQFPG-----------KLLSYN 318 (439)
T ss_dssp GGGEEEEECTTSCEEECCSHHHHHHHHHHHTT-TCSEEEECCSSCCHHHHHHHHHHHHHHSTT-----------CEEEEE
T ss_pred chhhcccCcccccccccCCHHHHHHHHHHHHh-hCCEEEecCCCCCHHHHHHHHHHhcccCCc-----------eEEeeC
Confidence 1234443 45 9999999 98999999999999987 541 001122
Q ss_pred CCccccccCCCceEEEEEEccHHHHHH-HHHHhccCCccEEEEChhhHHhh
Q 018508 201 IDEGYLSNYEEELLIMCQVESEEGVKR-AEDIAAVDGVDCVQMGPLDLSAS 250 (355)
Q Consensus 201 ~~~~y~~~~n~~i~vi~mIET~~av~n-ieeIaavpgVD~l~iGp~DLs~s 250 (355)
..+.|. +...+ +.+-+.+ .+|+.+. |+..++++..=|...
T Consensus 319 ~sPsfn--w~~~~-------~~~~~~~f~~eL~~l-Gv~~v~~~la~~raa 359 (439)
T 3i4e_A 319 CSPSFN--WKKNL-------DDATIAKFQKELGAM-GYKFQFITLAGFHAL 359 (439)
T ss_dssp CCSSSC--HHHHS-------CHHHHHTHHHHHHHH-TCCEEEETTHHHHHH
T ss_pred CCCCCc--CcccC-------CHHHHHHHHHHHHHc-CCeEEEeChHHHHHH
Confidence 211110 00000 4444555 5677765 899999988655443
No 468
>3fxt_A Nucleoside diphosphate-linked moiety X motif 6; nudix, NUDT6, GFG, FGF2AS, antisense basic fibroblast growth FGF-2 regulation, hydrolase; 2.30A {Homo sapiens}
Probab=36.53 E-value=29 Score=28.25 Aligned_cols=28 Identities=14% Similarity=0.176 Sum_probs=24.4
Q ss_pred cCCcEEEEEEecCCHHHHHHhhhcCCcE
Q 018508 82 SNETLYGLFLLSFSPTLAEISGLAGYDF 109 (355)
Q Consensus 82 ~G~~~~gl~v~~~sp~~~e~aa~~G~D~ 109 (355)
+|+..+-+-+|+.....+..+...||.|
T Consensus 67 ~gk~~IWlklpi~~s~lIp~a~~~GF~f 94 (113)
T 3fxt_A 67 EGRTAVWLHIPILQSRFIAPAASLGFCF 94 (113)
T ss_dssp TTCCEEEEEEEGGGGGGHHHHHHTTCEE
T ss_pred cCCeeEEEEcCHHHhhhHHHHHHcCcee
Confidence 4888888888999999999999999954
No 469
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=36.38 E-value=1.2e+02 Score=28.13 Aligned_cols=77 Identities=21% Similarity=0.101 Sum_probs=51.5
Q ss_pred HHHHHhhhcCCcEEEEeCCCC---CCCHHHHHHHHHHHH---hCCCCeEEcCCCCCHHH----HHHHHhcCCCeEee--c
Q 018508 97 TLAEISGLAGYDFVVVDMEHG---PGGISDALACLHALA---ATGTPAILRLPESCPTW----AKKALDLGPQGVMF--P 164 (355)
Q Consensus 97 ~~~e~aa~~G~D~vilDlEh~---~~~~~~a~~~i~a~~---~~g~~~iVRV~~~~~~~----i~~aLdaGa~GImv--P 164 (355)
..++.+...|.|.+++=---| ..+.++-.++++.+. ..+.++++=+...+... .+.+-++|+++||+ |
T Consensus 36 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 115 (303)
T 2wkj_A 36 RLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTP 115 (303)
T ss_dssp HHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhCCCCEEEecCC
Confidence 356677789999999866443 356666666555432 34577888898877643 46678899999765 5
Q ss_pred CC--CCHHHHH
Q 018508 165 MI--DSPEAAK 173 (355)
Q Consensus 165 ~V--esaeea~ 173 (355)
.- -|.+++.
T Consensus 116 ~y~~~s~~~l~ 126 (303)
T 2wkj_A 116 FYYPFSFEEHC 126 (303)
T ss_dssp CSSCCCHHHHH
T ss_pred CCCCCCHHHHH
Confidence 43 2666654
No 470
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=36.26 E-value=27 Score=32.74 Aligned_cols=68 Identities=13% Similarity=-0.114 Sum_probs=33.4
Q ss_pred ecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhC----CCCeEEcCCCCCHHHHHHHHhcCCCeEee
Q 018508 92 LSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAAT----GTPAILRLPESCPTWAKKALDLGPQGVMF 163 (355)
Q Consensus 92 ~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~----g~~~iVRV~~~~~~~i~~aLdaGa~GImv 163 (355)
-..+.+.++.+...|+|+|.+|- .+.+..+.+++.+... +..+++=..+.+...+....+.|+++|-+
T Consensus 205 ev~tlee~~~A~~aGaD~I~ld~----~~~~~l~~~v~~l~~~~~g~~~v~I~ASGGIt~~ni~~~~~~GvD~i~v 276 (294)
T 3c2e_A 205 ECLSEDEATEAIEAGADVIMLDN----FKGDGLKMCAQSLKNKWNGKKHFLLECSGGLNLDNLEEYLCDDIDIYST 276 (294)
T ss_dssp ECSSSHHHHHHHHHTCSEEECCC-------------------------CCEEEEECCCCC------CCCSCSEEEC
T ss_pred ecCCHHHHHHHHHcCCCEEEECC----CCHHHHHHHHHHhcccccCCCCeEEEEECCCCHHHHHHHHHcCCCEEEE
Confidence 44555667777789999999987 3344444444433322 11344445677788899999999998776
No 471
>3r79_A Uncharacterized protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium, TIM barrel; HET: PLP; 1.90A {Agrobacterium tumefaciens}
Probab=36.25 E-value=2.4e+02 Score=25.37 Aligned_cols=171 Identities=13% Similarity=0.025 Sum_probs=92.5
Q ss_pred EEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHh-CCCCeEEcCCCCCHHHHHHHHhcCCCeEeecC
Q 018508 87 YGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAA-TGTPAILRLPESCPTWAKKALDLGPQGVMFPM 165 (355)
Q Consensus 87 ~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~-~g~~~iVRV~~~~~~~i~~aLdaGa~GImvP~ 165 (355)
+..-+.......+..+..+|.+.+- ....+++.....++.. .....|.=+....+..++.+++. ++ +++-
T Consensus 33 l~AVvKahga~~i~~~~~~G~~~fg------en~vqEa~~kr~~~~~~~~~i~wh~iG~lq~nk~~~~v~~-~~--~i~s 103 (244)
T 3r79_A 33 LVAVSKTFDAEAIQPVIDAGQRVFG------ENRVQEAQGKWPALKEKTSDIELHLIGPLQSNKAADAVAL-FD--VVES 103 (244)
T ss_dssp EEEECTTCCHHHHHHHHHTTCCEEE------ESCHHHHHHHHHHHHHHSTTCEEEECSCCCGGGHHHHHHH-CS--EEEE
T ss_pred EEEEECCcCHHHHHHHHHCCCCEEE------EeeHHHHHHHHHhccccCCCeEEEecCCCCHHHHHHHHHH-CC--EEEe
Confidence 3333445455667777889998764 3446666655554332 12222222555666666666642 12 4677
Q ss_pred CCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEEcc-----------HHHHHHHHHHhcc
Q 018508 166 IDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVES-----------EEGVKRAEDIAAV 234 (355)
Q Consensus 166 Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mIET-----------~~av~nieeIaav 234 (355)
|++.+.++.+.+.+... +..+.|.++|.| .+..+-+++|.+.
T Consensus 104 Vds~~~a~~L~~~a~~~---------------------------g~~~~V~LqVdtG~e~~R~Gv~~ee~~~l~~~i~~l 156 (244)
T 3r79_A 104 IDREKIARALSEECARQ---------------------------GRSLRFYVQVNTGLEPQKAGIDPRETVAFVAFCRDE 156 (244)
T ss_dssp ECSHHHHHHHHHHHHHH---------------------------TCCCEEEEEBCTTCCTTSCSBCHHHHHHHHHHHHHT
T ss_pred eCCHHHHHHHHHHHHHc---------------------------CCCceEEEEEECCCCcCCCCCCHHHHHHHHHHHHcC
Confidence 99999999888766421 112345555544 2455666777777
Q ss_pred CCcc--EEEEChhhHHhhcCCCCCCCCH-HHHHHHHHHHHHHHhCCCceeecccCCchhHHHHHHCCCCEEEecchH
Q 018508 235 DGVD--CVQMGPLDLSASMGYLWDPGHR-KVREMMRVAEKGVLGGGKAYLAGFAMPHDAPLEMKSRGYHMVSGAVDV 308 (355)
Q Consensus 235 pgVD--~l~iGp~DLs~slG~~~~~~~p-~v~~ai~~iv~aa~a~g~~~~g~~~~d~~~a~~~~~~G~~~vs~~~D~ 308 (355)
|++. ||| + .+. ..+.| .....+.++.... .-....+|+..|.+. .++.|.+.+-+|+-+
T Consensus 157 ~~L~l~Glm--T------h~a--~~dd~~~~f~~l~~l~~~l--~~~~lSmGmS~d~~~---Ai~~G~t~vRvGtaI 218 (244)
T 3r79_A 157 LKLPVEGLM--C------IPP--AEENPGPHFALLAKLAGQC--GLEKLSMGMSGDFET---AVEFGATSVRVGSAI 218 (244)
T ss_dssp SCCCCCEEE--C------CCC--TTSCSHHHHHHHHHHHHHH--TCCEEECCCTTTHHH---HHHTTCSEEEECHHH
T ss_pred CCCEEEEEE--e------cCC--CCCCHHHHHHHHHHHHHhC--CCCEEEeecchhHHH---HHHcCCCEEEeeHHH
Confidence 7654 544 1 111 11122 2333333333322 122245555555444 478999999999755
No 472
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=36.12 E-value=88 Score=29.49 Aligned_cols=67 Identities=7% Similarity=-0.054 Sum_probs=46.0
Q ss_pred EecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHHHhcCCCeEee
Q 018508 91 LLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMF 163 (355)
Q Consensus 91 v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~aLdaGa~GImv 163 (355)
+-..+.+.++.+..+|+|.|.||- .+.+++++.++.+ .+...+.=-.+.+...+....+.|+|+|-+
T Consensus 214 VEvdtlde~~eAl~aGaD~I~LDn----~~~~~l~~av~~i--~~~v~ieaSGGI~~~~i~~~a~tGVD~isv 280 (298)
T 3gnn_A 214 IEVETLDQLRTALAHGARSVLLDN----FTLDMMRDAVRVT--EGRAVLEVSGGVNFDTVRAIAETGVDRISI 280 (298)
T ss_dssp EEESSHHHHHHHHHTTCEEEEEES----CCHHHHHHHHHHH--TTSEEEEEESSCSTTTHHHHHHTTCSEEEC
T ss_pred EEeCCHHHHHHHHHcCCCEEEECC----CCHHHHHHHHHHh--CCCCeEEEEcCCCHHHHHHHHHcCCCEEEE
Confidence 346677778888889999999997 4567777766654 122112112344667788888999998865
No 473
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=36.02 E-value=83 Score=27.19 Aligned_cols=74 Identities=20% Similarity=0.226 Sum_probs=47.7
Q ss_pred HHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhC-CCCeEEcCCCCC-----HH----HHHHHHhcCCCeEeecCCC
Q 018508 98 LAEISGLAGYDFVVVDMEHGPGGISDALACLHALAAT-GTPAILRLPESC-----PT----WAKKALDLGPQGVMFPMID 167 (355)
Q Consensus 98 ~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~-g~~~iVRV~~~~-----~~----~i~~aLdaGa~GImvP~Ve 167 (355)
.++.+..+|+|+|.+..|-+. + +++.+... |..+...++... .. .+..+.+.|++|+.+.-.
T Consensus 70 ~v~~~~~~Gad~vtvh~~~g~---~----~i~~~~~~~gv~vl~~t~~~~~~~~~~~~v~~~~~~a~~~G~~G~~~~~~- 141 (208)
T 2czd_A 70 IARKVFGAGADYVIVHTFVGR---D----SVMAVKELGEIIMVVEMSHPGALEFINPLTDRFIEVANEIEPFGVIAPGT- 141 (208)
T ss_dssp HHHHHHHTTCSEEEEESTTCH---H----HHHHHHTTSEEEEECCCCSGGGGTTTGGGHHHHHHHHHHHCCSEEECCCS-
T ss_pred HHHHHHhcCCCEEEEeccCCH---H----HHHHHHHhCCcEEEEecCCcchhhHHHHHHHHHHHHHHHhCCcEEEECCC-
Confidence 567788999999999999762 2 24444333 555555554322 11 134566789999887643
Q ss_pred CHHHHHHHHHHc
Q 018508 168 SPEAAKEAVSYC 179 (355)
Q Consensus 168 saeea~~vv~a~ 179 (355)
+.++++.+.+.+
T Consensus 142 ~~~~i~~lr~~~ 153 (208)
T 2czd_A 142 RPERIGYIRDRL 153 (208)
T ss_dssp STHHHHHHHHHS
T ss_pred ChHHHHHHHHhC
Confidence 478888887776
No 474
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=35.97 E-value=2.6e+02 Score=25.76 Aligned_cols=77 Identities=16% Similarity=0.056 Sum_probs=52.4
Q ss_pred HHHHhhhcCCcEEEEeCCCC---CCCHHHHHHHHHHHH-h--CCCCeEEcCCCCCHHH----HHHHHhcCCCeEee--cC
Q 018508 98 LAEISGLAGYDFVVVDMEHG---PGGISDALACLHALA-A--TGTPAILRLPESCPTW----AKKALDLGPQGVMF--PM 165 (355)
Q Consensus 98 ~~e~aa~~G~D~vilDlEh~---~~~~~~a~~~i~a~~-~--~g~~~iVRV~~~~~~~----i~~aLdaGa~GImv--P~ 165 (355)
.++.+...|.|.+++=---+ ..+.++-.++++.+. . .+.++++=+...+... .+.+-++|+++||+ |.
T Consensus 40 lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~ 119 (307)
T 3s5o_A 40 NLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSGCESTQATVEMTVSMAQVGADAAMVVTPC 119 (307)
T ss_dssp HHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCC
T ss_pred HHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCCC
Confidence 45677788999998876433 456666666666543 2 3467788887777643 46788899999886 65
Q ss_pred CC----CHHHHHH
Q 018508 166 ID----SPEAAKE 174 (355)
Q Consensus 166 Ve----saeea~~ 174 (355)
-. |.+++.+
T Consensus 120 y~~~~~s~~~l~~ 132 (307)
T 3s5o_A 120 YYRGRMSSAALIH 132 (307)
T ss_dssp TTGGGCCHHHHHH
T ss_pred cCCCCCCHHHHHH
Confidence 43 6666643
No 475
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=35.83 E-value=1.3e+02 Score=27.71 Aligned_cols=77 Identities=14% Similarity=-0.046 Sum_probs=51.0
Q ss_pred HHHHHhhh-cCCcEEEEeC---CCCCCCHHHHHHHHHHHH---hCCCCeEEcCCCCCHHH----HHHHHhcCCCeEee--
Q 018508 97 TLAEISGL-AGYDFVVVDM---EHGPGGISDALACLHALA---ATGTPAILRLPESCPTW----AKKALDLGPQGVMF-- 163 (355)
Q Consensus 97 ~~~e~aa~-~G~D~vilDl---Eh~~~~~~~a~~~i~a~~---~~g~~~iVRV~~~~~~~----i~~aLdaGa~GImv-- 163 (355)
..++.+.. .|.|.+++=- |-...+.++-.++++.+. ....++++=+...+... .+.+-++|+++||+
T Consensus 28 ~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~ 107 (293)
T 1f6k_A 28 QIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVGSVNLKEAVELGKYATELGYDCLSAVT 107 (293)
T ss_dssp HHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 45666778 8999998865 333456666666665432 34577888888877643 46678899999765
Q ss_pred cCC--CCHHHHH
Q 018508 164 PMI--DSPEAAK 173 (355)
Q Consensus 164 P~V--esaeea~ 173 (355)
|.- -|.+++.
T Consensus 108 P~y~~~~~~~l~ 119 (293)
T 1f6k_A 108 PFYYKFSFPEIK 119 (293)
T ss_dssp CCSSCCCHHHHH
T ss_pred CCCCCCCHHHHH
Confidence 543 2555554
No 476
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=35.80 E-value=1.1e+02 Score=28.21 Aligned_cols=77 Identities=18% Similarity=0.070 Sum_probs=51.5
Q ss_pred HHHHHhhhcCCcEEEEeC---CCCCCCHHHHHHHHHHHH---hCCCCeEEcCCCCCHHH----HHHHHhcCCCeEee--c
Q 018508 97 TLAEISGLAGYDFVVVDM---EHGPGGISDALACLHALA---ATGTPAILRLPESCPTW----AKKALDLGPQGVMF--P 164 (355)
Q Consensus 97 ~~~e~aa~~G~D~vilDl---Eh~~~~~~~a~~~i~a~~---~~g~~~iVRV~~~~~~~----i~~aLdaGa~GImv--P 164 (355)
..++.+...|.|.+++=- |-...+.++-.++++.+. ....++++=+...+... .+.+-++|+++||+ |
T Consensus 25 ~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 104 (297)
T 2rfg_A 25 GLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAGSNNPVEAVRYAQHAQQAGADAVLCVAG 104 (297)
T ss_dssp HHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred HHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEccCCCCHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 456667788999998765 333456666666655432 34578889998877643 46678899999775 5
Q ss_pred CC--CCHHHHH
Q 018508 165 MI--DSPEAAK 173 (355)
Q Consensus 165 ~V--esaeea~ 173 (355)
.- -|.+++.
T Consensus 105 ~y~~~s~~~l~ 115 (297)
T 2rfg_A 105 YYNRPSQEGLY 115 (297)
T ss_dssp TTTCCCHHHHH
T ss_pred CCCCCCHHHHH
Confidence 43 2556654
No 477
>3mub_A Alanine racemase; alpha/beta barrel, extended beta-strand domain, pyridoxal PH cofactor, carba lysine, isomerase; HET: LLP KCX; 2.00A {Streptococcus pneumoniae} PDB: 3s46_A*
Probab=35.52 E-value=3e+02 Score=26.17 Aligned_cols=162 Identities=12% Similarity=-0.019 Sum_probs=84.4
Q ss_pred CHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCC-eEEcCCCCCHHHHHHHHhcCCCeEeecCCCCHHHHH
Q 018508 95 SPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTP-AILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAK 173 (355)
Q Consensus 95 sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~-~iVRV~~~~~~~i~~aLdaGa~GImvP~Vesaeea~ 173 (355)
.+..++.+... ++.+. ....+++..+.. .|.. +++-+....+..+..+++.+ + .+.|+|.++++
T Consensus 48 ~~~va~~l~~~-~~~f~------va~~~Ea~~lr~----~G~~~~ilvlg~~~~~~~~~~~~~~---l-~~~V~s~~~l~ 112 (367)
T 3mub_A 48 AVAVAKAIQDD-VDGFC------VSNIDEAIELRQ----AGLSKPILILGVSEIEAVALAKEYD---F-TLTVAGLEWIQ 112 (367)
T ss_dssp HHHHHHHHGGG-CSEEE------ESSHHHHHHHHH----TTCCSCEEEEEECCGGGHHHHHHTT---E-EEEECCHHHHH
T ss_pred HHHHHHHHHHh-CCeEE------EeEHHHHHHHHH----cCCCCCEEEEcCCCHHHHHHHHHcC---C-EEEECCHHHHH
Confidence 35566666666 77654 345666655433 2322 33223334555677777753 3 58899999999
Q ss_pred HHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEEcc----------HHHHHHHHHHhccCCccEEEEC
Q 018508 174 EAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVES----------EEGVKRAEDIAAVDGVDCVQMG 243 (355)
Q Consensus 174 ~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mIET----------~~av~nieeIaavpgVD~l~iG 243 (355)
.+.+.++.. ....+.++|.| .+..+-++.|.+ |++...-+.
T Consensus 113 ~l~~~a~~~----------------------------~~~~V~lkvdtGm~R~G~~~~ee~~~~~~~i~~-~~l~l~Gl~ 163 (367)
T 3mub_A 113 ALLDKEVDL----------------------------TGLTVHLKIDSGMGRIGFREASEVEQAQDLLQQ-HGVCVEGIF 163 (367)
T ss_dssp HHHHTTCCC----------------------------TTCEEEEEECSSCCSSSBCSHHHHHHHHHHHHH-TTCEEEEEE
T ss_pred HHHHHHHhc----------------------------CCeeEEEEECCCCCcCCCCcHHHHHHHHHHHcc-CCcEEEEEE
Confidence 998866421 01223334333 445566677777 877644433
Q ss_pred hhhHHhhcCCCCCCCCHHHHHHHHHHHHHHHhCCCc-eeecccCCchhHHHHHHCCCCEEEecc
Q 018508 244 PLDLSASMGYLWDPGHRKVREMMRVAEKGVLGGGKA-YLAGFAMPHDAPLEMKSRGYHMVSGAV 306 (355)
Q Consensus 244 p~DLs~slG~~~~~~~p~v~~ai~~iv~aa~a~g~~-~~g~~~~d~~~a~~~~~~G~~~vs~~~ 306 (355)
+. ++...+++++.....+++..+.+...... ..-. ..+......+-+.+++++-.|.
T Consensus 164 tH-----~a~ad~~~~~~~~~Q~~~F~~~~~~l~~~~~~~h-~~NSa~~l~~~~~~~d~vR~Gi 221 (367)
T 3mub_A 164 TH-----FATADEESDDYFNAQLERFKTILASMKEVPELVH-ASNSATTLWHVETIFNAVRMGD 221 (367)
T ss_dssp EC-----CSSTTSSCCHHHHHHHHHHHHHHHTCSSCCSEEE-EECHHHHHHCGGGCCSEEEECT
T ss_pred EE-----ccCCCCCCCHHHHHHHHHHHHHHHHhhhcCCeEE-EecChHHhcCcccCCCeEEhhh
Confidence 32 33333445555555566655544432211 1101 1122222233456777777664
No 478
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A*
Probab=35.41 E-value=99 Score=32.07 Aligned_cols=91 Identities=19% Similarity=0.155 Sum_probs=59.1
Q ss_pred chHHHHHHHcCCcEEEEEEecCCHHHHHH---hhhcCCcEEEE---eC--CCCCCCHHHHHH-HHHHHHhCCCCeEE---
Q 018508 73 PESLKYRLQSNETLYGLFLLSFSPTLAEI---SGLAGYDFVVV---DM--EHGPGGISDALA-CLHALAATGTPAIL--- 140 (355)
Q Consensus 73 ~n~lk~~L~~G~~~~gl~v~~~sp~~~e~---aa~~G~D~vil---Dl--Eh~~~~~~~a~~-~i~a~~~~g~~~iV--- 140 (355)
...+|+.|.....-+.++..+-+++.++. +... .|.|++ || |-+......+++ +++.++..|+++++
T Consensus 221 v~~~r~~l~~~~~~i~IiaKIE~~eav~nldeIl~~-sDGImVARGDLgvei~~e~vp~~Qk~ii~~~~~~gkpvi~ATQ 299 (606)
T 3t05_A 221 VLEIREILEEQKANISVFPKIENQEGIDNIEEILEV-SDGLMVARGDMGVEIPPEKVPMVQKDLIRQCNKLGKPVITATQ 299 (606)
T ss_dssp HHHHHHHHHHTTCCCEEEECCCSHHHHHTHHHHHHH-CSCEEEEHHHHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESS
T ss_pred HHHHHHHHHhcCCCCeEEEEeCCHHHHHhHHHHHHh-CCEEEEccccccCcCCHHHHHHHHHHHHHHHHHcCCCeEEehH
Confidence 46788888754456789999999886632 2233 789998 22 222334445554 56778888999887
Q ss_pred ------cCCCCCHHH---HHHHHhcCCCeEeec
Q 018508 141 ------RLPESCPTW---AKKALDLGPQGVMFP 164 (355)
Q Consensus 141 ------RV~~~~~~~---i~~aLdaGa~GImvP 164 (355)
+=|-+.... +..+.--|+|+||+-
T Consensus 300 MLeSMi~~p~PTRAEvsDVanAv~dGaDavMLS 332 (606)
T 3t05_A 300 MLDSMQRNPRATRAEASDVANAIYDGTDAVMLS 332 (606)
T ss_dssp SSGGGTTCSSCCHHHHHHHHHHHHHTCSEEEEC
T ss_pred HHHHhhcCCCccHHHHHHHHHHHHcCCCEEEec
Confidence 444444443 344555699999996
No 479
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=35.39 E-value=1.8e+02 Score=26.55 Aligned_cols=89 Identities=17% Similarity=0.075 Sum_probs=51.6
Q ss_pred chHHHHHHHc-CCcEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHH-----HHHHHHHHHHh-CCCCeEEcCCCC
Q 018508 73 PESLKYRLQS-NETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGIS-----DALACLHALAA-TGTPAILRLPES 145 (355)
Q Consensus 73 ~n~lk~~L~~-G~~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~-----~a~~~i~a~~~-~g~~~iVRV~~~ 145 (355)
...+++.+++ |-..+-+..+..+++.++.++..+-.|+++.-=-+..... ...+.+..++. .+.+++|=-.-.
T Consensus 133 ~~~~~~~~~~~gl~~i~liap~s~~eri~~ia~~~~gfiy~vs~~G~TG~~~~~~~~~~~~v~~vr~~~~~Pv~vGfGI~ 212 (271)
T 1ujp_A 133 DPGLVRLAQEIGLETVFLLAPTSTDARIATVVRHATGFVYAVSVTGVTGMRERLPEEVKDLVRRIKARTALPVAVGFGVS 212 (271)
T ss_dssp CHHHHHHHHHHTCEEECEECTTCCHHHHHHHHTTCCSCEEEECC------------CCHHHHHHHHTTCCSCEEEESCCC
T ss_pred HHHHHHHHHHcCCceEEEeCCCCCHHHHHHHHHhCCCCEEEEecCcccCCCCCCCccHHHHHHHHHhhcCCCEEEEcCCC
Confidence 3456666653 4445555555666777777766666666666222222211 11345555543 466777766555
Q ss_pred CHHHHHHHHhcCCCeEee
Q 018508 146 CPTWAKKALDLGPQGVMF 163 (355)
Q Consensus 146 ~~~~i~~aLdaGa~GImv 163 (355)
++++++++ .|||||+|
T Consensus 213 t~e~a~~~--~~ADgVIV 228 (271)
T 1ujp_A 213 GKATAAQA--AVADGVVV 228 (271)
T ss_dssp SHHHHHHH--TTSSEEEE
T ss_pred CHHHHHHh--cCCCEEEE
Confidence 68899886 99999987
No 480
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=35.33 E-value=1.9e+02 Score=27.04 Aligned_cols=91 Identities=18% Similarity=0.137 Sum_probs=54.9
Q ss_pred EecCCHHHHHHhhhcCCcEEEEeCCCCCCC-HHHH-------------------------------HHHHHHHH-hCCCC
Q 018508 91 LLSFSPTLAEISGLAGYDFVVVDMEHGPGG-ISDA-------------------------------LACLHALA-ATGTP 137 (355)
Q Consensus 91 v~~~sp~~~e~aa~~G~D~vilDlEh~~~~-~~~a-------------------------------~~~i~a~~-~~g~~ 137 (355)
+-..+...++.+...|+|.|.+..+.+..+ .+.. .++++.+. ..+.+
T Consensus 130 v~v~~~~Ea~~a~~~Gad~I~v~g~~gTG~~~~~v~h~~~~~~eir~l~~~~~d~L~t~~~~~~~~~~ll~~i~~~~~iP 209 (297)
T 4adt_A 130 CGCTNLGEALRRISEGASMIRTKGEAGTGNIIEAIKHIRTVNNEIKYLCSLDESEVYNFAKKLRAPIDLILLTRKLKRLP 209 (297)
T ss_dssp EEESSHHHHHHHHHHTCSEEEECCCTTSCCCHHHHHHHHHHHHHHHHHHHSCTTTHHHHHHHHTCCHHHHHHHHHHTSCS
T ss_pred EEeCCHHHHHHHHhCCCCEEEECCCcCCCchHHHHHHHHHhhhhhhhhccccccccccccccCCCCHHHHHHHHHhcCCC
Confidence 356788888888889999999997733211 1111 11222222 23344
Q ss_pred eE-EcCCCC-CHHHHHHHHhcCCCeEeec----CCCCHH-HHHHHHHHcCC
Q 018508 138 AI-LRLPES-CPTWAKKALDLGPQGVMFP----MIDSPE-AAKEAVSYCRF 181 (355)
Q Consensus 138 ~i-VRV~~~-~~~~i~~aLdaGa~GImvP----~Vesae-ea~~vv~a~~~ 181 (355)
++ |=..+. ++..+.+++++|++||++= +-.+++ .++++++.++.
T Consensus 210 VivvA~GGI~t~~dv~~~~~~GAdgVlVGsai~~a~dp~~~~~~l~~ai~~ 260 (297)
T 4adt_A 210 VVNFAAGGIATPADAAMCMQLGMDGVFVGSGIFESENPQKMASSIVMAVSN 260 (297)
T ss_dssp SEEEEESCCCSHHHHHHHHHTTCSCEEESHHHHTSSCHHHHHHHHHHHHHT
T ss_pred eEEEecCCCCCHHHHHHHHHcCCCEEEEhHHHHcCCCHHHHHHHHHHHHHh
Confidence 33 244555 6788999999999998873 334544 35566666543
No 481
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=35.13 E-value=1.1e+02 Score=28.94 Aligned_cols=77 Identities=17% Similarity=0.117 Sum_probs=52.2
Q ss_pred HHHHHhhhcCCcEEEEeCCCC---CCCHHHHHHHHHHHH---hCCCCeEEcCCCCCHHH----HHHHHhcCCCeEee--c
Q 018508 97 TLAEISGLAGYDFVVVDMEHG---PGGISDALACLHALA---ATGTPAILRLPESCPTW----AKKALDLGPQGVMF--P 164 (355)
Q Consensus 97 ~~~e~aa~~G~D~vilDlEh~---~~~~~~a~~~i~a~~---~~g~~~iVRV~~~~~~~----i~~aLdaGa~GImv--P 164 (355)
..++.+...|.|.|++=---+ ..+.++-.++++.+. ....++++=+...+... .+.+-++|+++||+ |
T Consensus 56 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P 135 (343)
T 2v9d_A 56 ALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGGTNARETIELSQHAQQAGADGIVVINP 135 (343)
T ss_dssp HHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCSSCHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 456677789999999876444 456666666655432 34578889998877643 46678899999765 5
Q ss_pred CC--CCHHHHH
Q 018508 165 MI--DSPEAAK 173 (355)
Q Consensus 165 ~V--esaeea~ 173 (355)
.- -|.+++.
T Consensus 136 ~Y~~~s~~~l~ 146 (343)
T 2v9d_A 136 YYWKVSEANLI 146 (343)
T ss_dssp SSSCCCHHHHH
T ss_pred CCCCCCHHHHH
Confidence 53 2666654
No 482
>4exb_A Putative uncharacterized protein; aldo-keto reductase, NADP+ binding, oxidoreducta; 2.75A {Pseudomonas aeruginosa} PDB: 4exa_A
Probab=35.05 E-value=1.5e+02 Score=27.13 Aligned_cols=100 Identities=12% Similarity=-0.004 Sum_probs=64.2
Q ss_pred HHHHHHHcCCc-EEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCC--------
Q 018508 75 SLKYRLQSNET-LYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPES-------- 145 (355)
Q Consensus 75 ~lk~~L~~G~~-~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~-------- 145 (355)
.|.+..++|+. .+|+ .--++..++.+... ++++-+ |..+..... ..++..++..|..++++-|=.
T Consensus 174 al~~l~~~Gkir~iGv--Sn~~~~~l~~~~~~-~~~~Q~--~~~~~~~~~-~~l~~~~~~~gi~v~a~spL~~G~L~~~~ 247 (292)
T 4exb_A 174 TLAALKREGLIGAYGL--SGKTVEGGLRALRE-GDCAMV--TYNLNERAE-RPVIEYAAAHAKGILVKKALASGHACLGA 247 (292)
T ss_dssp HHHHHHHTTSEEEEEE--ECSSHHHHHHHHHH-SSEEEE--ECSSSCCTT-HHHHHHHHHTTCEEEEECCSCC-------
T ss_pred HHHHHHHCCCceEEEe--CCCCHHHHHHHHHh-hcEEee--ccccccCCH-HHHHHHHHHCCcEEEEeccccCCccCCCC
Confidence 44455566764 3443 34466666666665 665544 556654333 566777777777766654321
Q ss_pred --CHH--HHHHHHhcCCCeEeecCCCCHHHHHHHHHHcC
Q 018508 146 --CPT--WAKKALDLGPQGVMFPMIDSPEAAKEAVSYCR 180 (355)
Q Consensus 146 --~~~--~i~~aLdaGa~GImvP~Vesaeea~~vv~a~~ 180 (355)
.+. .++.++..+.-.+++|...+++++++-++++.
T Consensus 248 g~t~aqvaL~w~l~~~~v~~vI~g~~~~~~l~en~~a~~ 286 (292)
T 4exb_A 248 GQDPVRASFELVFDQPGVAAAIVGTINPLHLAHNVAMAA 286 (292)
T ss_dssp -CCHHHHHHHHHHHSTTCCEEEECCCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHHHhh
Confidence 222 25678888877889999999999999888764
No 483
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=35.00 E-value=1.7e+02 Score=26.66 Aligned_cols=79 Identities=16% Similarity=0.064 Sum_probs=45.8
Q ss_pred HHHhhhcC-CcEEE----------EeCCCC---------------CCCHHHHHHHHHHHHh-CCCCeEEcCCCC-CHHHH
Q 018508 99 AEISGLAG-YDFVV----------VDMEHG---------------PGGISDALACLHALAA-TGTPAILRLPES-CPTWA 150 (355)
Q Consensus 99 ~e~aa~~G-~D~vi----------lDlEh~---------------~~~~~~a~~~i~a~~~-~g~~~iVRV~~~-~~~~i 150 (355)
++.+..+| +|+|+ +|.+.. +..+......++.+.. .+..+++=+.+. ++..+
T Consensus 180 a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~~~~~ipvi~~GGI~~~~da 259 (314)
T 2e6f_A 180 AAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYRRCPDKLVFGCGGVYSGEDA 259 (314)
T ss_dssp HHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHHHCTTSEEEEESSCCSHHHH
T ss_pred HHHHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHHhcCCCCEEEECCCCCHHHH
Confidence 66778899 99986 553221 1112334455554432 234455555555 46788
Q ss_pred HHHHhcCCCeEeec--CC-CCHHHHHHHHH
Q 018508 151 KKALDLGPQGVMFP--MI-DSPEAAKEAVS 177 (355)
Q Consensus 151 ~~aLdaGa~GImvP--~V-esaeea~~vv~ 177 (355)
.+++.+||++|++= .+ +++.-++++.+
T Consensus 260 ~~~l~~GAd~V~ig~~~l~~~p~~~~~i~~ 289 (314)
T 2e6f_A 260 FLHILAGASMVQVGTALQEEGPGIFTRLED 289 (314)
T ss_dssp HHHHHHTCSSEEECHHHHHHCTTHHHHHHH
T ss_pred HHHHHcCCCEEEEchhhHhcCcHHHHHHHH
Confidence 88889999998873 33 35444444443
No 484
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=34.91 E-value=1.6e+02 Score=27.49 Aligned_cols=108 Identities=9% Similarity=-0.070 Sum_probs=61.2
Q ss_pred cCCCCHHHHHHHHHHcCCCCCCCCCCcccccccccCCCCccccccCCCceEEEEEEccHHHHHHHHHHhc--------cC
Q 018508 164 PMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDEGYLSNYEEELLIMCQVESEEGVKRAEDIAA--------VD 235 (355)
Q Consensus 164 P~Vesaeea~~vv~a~~~pP~G~Rg~g~~~~ra~~~g~~~~y~~~~n~~i~vi~mIET~~av~nieeIaa--------vp 235 (355)
|.-=+.|++++++++.++.|.+. |.+..-++-|+.++..+.+.+.+. .|
T Consensus 159 ~~~V~~e~l~~ileaA~~APS~~-----------------------N~Qpwrfivv~d~e~~~~l~~~~~~~~~~~~~Ap 215 (322)
T 4eo3_A 159 KDRVPREELELLIKAAHLAPSCM-----------------------NNQPWRFVVVDEEELLKKIHEALPGGNYWMKNAP 215 (322)
T ss_dssp CCCCCHHHHHHHHHHHHTSCCGG-----------------------GCCCCEEEEECCHHHHHHHHTTSCGGGGGGGGCS
T ss_pred ccccCHHHHHHHHHHHHhCcCcC-----------------------CCcCeEEEEEeCHHHHHHHHHhhhhccccccCCC
Confidence 44446799999999999988542 333344566788888888776542 12
Q ss_pred CccEEEEChhhHHhhcCCCCCCCC--HHHHHHHHHHHHHHHhCCCceeecccCCchhHHHHHHC
Q 018508 236 GVDCVQMGPLDLSASMGYLWDPGH--RKVREMMRVAEKGVLGGGKAYLAGFAMPHDAPLEMKSR 297 (355)
Q Consensus 236 gVD~l~iGp~DLs~slG~~~~~~~--p~v~~ai~~iv~aa~a~g~~~~g~~~~d~~~a~~~~~~ 297 (355)
+-.++++..++... .+..... -..--++..+..+|++.|...|-.-..+++.++..+.+
T Consensus 216 -~~ivv~~~~~~~~~--~~~~~~~~~~d~g~a~~nl~LaA~~~GLgs~~~~~~~~~~v~~~L~l 276 (322)
T 4eo3_A 216 -ALIAVHSKKDFDCA--LPDNRDYFLFDTGLAVGNLLVQATQMGLVAHPVAGYDPVKVKEILKI 276 (322)
T ss_dssp -EEEEEEECGGGSCE--ETTTEECHHHHHHHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHTC
T ss_pred -EEEEEEeecccccc--ccccccchHHHHHHHHHHHHHHHHHcCcCEEEcCccCHHHHHHHcCc
Confidence 22333444333222 1111111 12334567788888888876443223355666666654
No 485
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=34.78 E-value=1.1e+02 Score=28.23 Aligned_cols=80 Identities=15% Similarity=0.106 Sum_probs=52.6
Q ss_pred HHHHHhhhcCCcEEEEeCCCC---CCCHHHHHHHHHHHH---hCCCCeEEcCCCCCHHH----HHHHHhcCCCeEee--c
Q 018508 97 TLAEISGLAGYDFVVVDMEHG---PGGISDALACLHALA---ATGTPAILRLPESCPTW----AKKALDLGPQGVMF--P 164 (355)
Q Consensus 97 ~~~e~aa~~G~D~vilDlEh~---~~~~~~a~~~i~a~~---~~g~~~iVRV~~~~~~~----i~~aLdaGa~GImv--P 164 (355)
..++.+...|.|.+++=---| ..+.++-.++++.+. ..+.++++=+...+... .+.+-++|+++||+ |
T Consensus 26 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 105 (292)
T 2ojp_A 26 KLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTVTP 105 (292)
T ss_dssp HHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHTTTSSCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHhcCCCEEEECCC
Confidence 355667788999998876444 456666666655432 34578888998877643 45677889999765 5
Q ss_pred CC--CCHHHHHHHH
Q 018508 165 MI--DSPEAAKEAV 176 (355)
Q Consensus 165 ~V--esaeea~~vv 176 (355)
.- -|.+++.+-.
T Consensus 106 ~y~~~s~~~l~~~f 119 (292)
T 2ojp_A 106 YYNRPSQEGLYQHF 119 (292)
T ss_dssp CSSCCCHHHHHHHH
T ss_pred CCCCCCHHHHHHHH
Confidence 43 2666655333
No 486
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=34.58 E-value=1.1e+02 Score=28.08 Aligned_cols=77 Identities=18% Similarity=0.118 Sum_probs=51.5
Q ss_pred HHHHHhhhcCCcEEEEeC---CCCCCCHHHHHHHHHHHH---hCCCCeEEcCCCCCHHH----HHHHHhcCCCeEee--c
Q 018508 97 TLAEISGLAGYDFVVVDM---EHGPGGISDALACLHALA---ATGTPAILRLPESCPTW----AKKALDLGPQGVMF--P 164 (355)
Q Consensus 97 ~~~e~aa~~G~D~vilDl---Eh~~~~~~~a~~~i~a~~---~~g~~~iVRV~~~~~~~----i~~aLdaGa~GImv--P 164 (355)
..++.+...|.|.+++=- |-...+.++-.++++.+. ....++++=+...+... .+.+-+.|+++||+ |
T Consensus 25 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 104 (292)
T 2vc6_A 25 DLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGAGSNSTAEAIAFVRHAQNAGADGVLIVSP 104 (292)
T ss_dssp HHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 456677788999988765 333456666666665432 24578888998877643 46678899999765 5
Q ss_pred CCC--CHHHHH
Q 018508 165 MID--SPEAAK 173 (355)
Q Consensus 165 ~Ve--saeea~ 173 (355)
.-. |.+++.
T Consensus 105 ~y~~~s~~~l~ 115 (292)
T 2vc6_A 105 YYNKPTQEGIY 115 (292)
T ss_dssp CSSCCCHHHHH
T ss_pred CCCCCCHHHHH
Confidence 432 666654
No 487
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=34.51 E-value=58 Score=30.56 Aligned_cols=71 Identities=18% Similarity=0.280 Sum_probs=43.6
Q ss_pred EEEEEEccHHHHHHHHHHhccCCccEEEEChhhHHhhcCCCCCCCCHHHHHHHHHHHHHHHh-CCCceeecccCCchhHH
Q 018508 214 LIMCQVESEEGVKRAEDIAAVDGVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVAEKGVLG-GGKAYLAGFAMPHDAPL 292 (355)
Q Consensus 214 ~vi~mIET~~av~nieeIaavpgVD~l~iGp~DLs~slG~~~~~~~p~v~~ai~~iv~aa~a-~g~~~~g~~~~d~~~a~ 292 (355)
.+++-++|.+ .+.+.++. |+|+|.+++.++ ..+..++ +.... ..+...|++ +++.++
T Consensus 210 kI~vev~tle---e~~eA~~a-GaD~I~ld~~~~------------e~l~~~v----~~~~~~~~I~ASGGI--t~~~i~ 267 (296)
T 1qap_A 210 PVEVEVENLD---ELDDALKA-GADIIMLDNFNT------------DQMREAV----KRVNGQARLEVSGNV--TAETLR 267 (296)
T ss_dssp CEEEEESSHH---HHHHHHHT-TCSEEEESSCCH------------HHHHHHH----HTTCTTCCEEECCCS--CHHHHH
T ss_pred cEEEEeCCHH---HHHHHHHc-CCCEEEECCCCH------------HHHHHHH----HHhCCCCeEEEECCC--CHHHHH
Confidence 5677788873 34443432 899999986322 2233222 22211 111235555 678899
Q ss_pred HHHHCCCCEEEecc
Q 018508 293 EMKSRGYHMVSGAV 306 (355)
Q Consensus 293 ~~~~~G~~~vs~~~ 306 (355)
.+++.|.+.+++|+
T Consensus 268 ~~a~~GvD~isvGs 281 (296)
T 1qap_A 268 EFAETGVDFISVGA 281 (296)
T ss_dssp HHHHTTCSEEECSH
T ss_pred HHHHcCCCEEEEeH
Confidence 99999999999986
No 488
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=34.38 E-value=1e+02 Score=28.36 Aligned_cols=77 Identities=18% Similarity=0.151 Sum_probs=51.8
Q ss_pred HHHHHhhhcCCcEEEEeCCCC---CCCHHHHHHHHHHHH-h--CCCCeEEcCCCCCHHH----HHHHHhcCCCeEee--c
Q 018508 97 TLAEISGLAGYDFVVVDMEHG---PGGISDALACLHALA-A--TGTPAILRLPESCPTW----AKKALDLGPQGVMF--P 164 (355)
Q Consensus 97 ~~~e~aa~~G~D~vilDlEh~---~~~~~~a~~~i~a~~-~--~g~~~iVRV~~~~~~~----i~~aLdaGa~GImv--P 164 (355)
..++.+...|.|.+++=---| ..+.++-.++++.+. . .+.++++=+...+... .+.+-++|+++||+ |
T Consensus 28 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 107 (294)
T 3b4u_A 28 AHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVLVDSIEDAADQSAEALNAGARNILLAPP 107 (294)
T ss_dssp HHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEECCSSHHHHHHHHHHHHHTTCSEEEECCC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 456677788999998876444 466676666666543 2 3467888888877543 56678899999875 5
Q ss_pred CC---CCHHHHH
Q 018508 165 MI---DSPEAAK 173 (355)
Q Consensus 165 ~V---esaeea~ 173 (355)
.- -|.+++.
T Consensus 108 ~y~~~~s~~~l~ 119 (294)
T 3b4u_A 108 SYFKNVSDDGLF 119 (294)
T ss_dssp CSSCSCCHHHHH
T ss_pred cCCCCCCHHHHH
Confidence 43 2556554
No 489
>3co8_A Alanine racemase; protein structure initiative II, PSI-II, PLP, TIM barrel, structural genomics, NEW YORK SGX center for structural genomics; HET: PLP; 1.70A {Oenococcus oeni}
Probab=34.30 E-value=2.6e+02 Score=26.28 Aligned_cols=91 Identities=19% Similarity=0.057 Sum_probs=56.2
Q ss_pred hHHHHHHHcCCcEEEEEEec-----CCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCC-eEEcCCCCCH
Q 018508 74 ESLKYRLQSNETLYGLFLLS-----FSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTP-AILRLPESCP 147 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~-----~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~-~iVRV~~~~~ 147 (355)
..+++++ +...+..-+.. +++.+++.+...|++.+- ....+++..+..+ |.. .++=+....+
T Consensus 24 ~~l~~~~--~~~~l~~vvKanaYGhg~~~i~~~l~~~G~~~~~------vas~~Ea~~l~~a----G~~~~il~~g~~~~ 91 (380)
T 3co8_A 24 QYTKQVS--GAKTLWLAVKSNAYGHGLLQVSKIARECGVDGLA------VSVLDEGIAIRQA----GIDDFILILGPIDV 91 (380)
T ss_dssp HHHHHHH--CCSEEEEECHHHHHTTCHHHHHHHHGGGTCCEEE------ESSHHHHHHHHHT----TCCCCEEECSCCCG
T ss_pred HHHHHhC--CCcEEEEEEEecccCCCHHHHHHHHHHcCCCEEE------EeeHHHHHHHHhc----CCCCCEEEECCCCH
Confidence 3455555 34444444444 457788888889987544 2456666554432 332 2332344556
Q ss_pred HHHHHHHhcCCCeEeecCCCCHHHHHHHHHHcC
Q 018508 148 TWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCR 180 (355)
Q Consensus 148 ~~i~~aLdaGa~GImvP~Vesaeea~~vv~a~~ 180 (355)
..+..+++.+ + .+.|+|.++++.+.+.++
T Consensus 92 ~~~~~~~~~~---i-~~~vds~~~l~~l~~~a~ 120 (380)
T 3co8_A 92 KYAPIASKYH---F-LTTVSSLDWLKSADKILG 120 (380)
T ss_dssp GGHHHHHHTT---C-EEEECCHHHHHHHHHHCT
T ss_pred HHHHHHHHCC---C-EEEECCHHHHHHHHHhcc
Confidence 6788888865 3 478999999999988765
No 490
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=34.16 E-value=1.9e+02 Score=26.01 Aligned_cols=91 Identities=13% Similarity=0.110 Sum_probs=51.6
Q ss_pred chHHHHHHHcCC-cEEEEEEecCCHHHHHHhhhcCCcEEEEeCCCCCCC-----HHHHHHHHHHHH-hCCCCeEEcCCCC
Q 018508 73 PESLKYRLQSNE-TLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGG-----ISDALACLHALA-ATGTPAILRLPES 145 (355)
Q Consensus 73 ~n~lk~~L~~G~-~~~gl~v~~~sp~~~e~aa~~G~D~vilDlEh~~~~-----~~~a~~~i~a~~-~~g~~~iVRV~~~ 145 (355)
...+.+.+++-. ..+-+..+..+++.++.++..+-+|+.+.--.+... .+...+.++.++ ..+.+++|=-.-.
T Consensus 136 ~~~~~~~~~~~g~~~i~l~~p~t~~~~i~~i~~~~~g~v~~~s~~G~tG~~~~~~~~~~~~i~~lr~~~~~pi~vggGI~ 215 (268)
T 1qop_A 136 SAPFRQAALRHNIAPIFICPPNADDDLLRQVASYGRGYTYLLSRSGVTGAENRGALPLHHLIEKLKEYHAAPALQGFGIS 215 (268)
T ss_dssp CHHHHHHHHHTTCEEECEECTTCCHHHHHHHHHHCCSCEEEESSSSCCCSSSCC--CCHHHHHHHHHTTCCCEEEESSCC
T ss_pred HHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHhhCCCcEEEEecCCcCCCccCCCchHHHHHHHHHhccCCcEEEECCCC
Confidence 456666666433 333333345666777776666666776654333211 122233343333 2356666644334
Q ss_pred CHHHHHHHHhcCCCeEee
Q 018508 146 CPTWAKKALDLGPQGVMF 163 (355)
Q Consensus 146 ~~~~i~~aLdaGa~GImv 163 (355)
++..+.+++.+||+||++
T Consensus 216 t~e~~~~~~~agAD~vVV 233 (268)
T 1qop_A 216 SPEQVSAAVRAGAAGAIS 233 (268)
T ss_dssp SHHHHHHHHHTTCSEEEE
T ss_pred CHHHHHHHHHcCCCEEEE
Confidence 588899999999999886
No 491
>3gwq_A D-serine deaminase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; HET: MSE; 2.00A {Burkholderia xenovorans LB400}
Probab=33.98 E-value=3.3e+02 Score=26.29 Aligned_cols=97 Identities=11% Similarity=0.031 Sum_probs=57.8
Q ss_pred hHHHHHHHcCCcEEEEEEec-CCHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCC-CCeEEcCCCCCHHHHH
Q 018508 74 ESLKYRLQSNETLYGLFLLS-FSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATG-TPAILRLPESCPTWAK 151 (355)
Q Consensus 74 n~lk~~L~~G~~~~gl~v~~-~sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g-~~~iVRV~~~~~~~i~ 151 (355)
..+++.+......+..-+.. .++.+++.+...|++.+. ....+++..+.. .| ..+++..+-..+..+.
T Consensus 61 ~~l~~~~~~~gv~l~~vvKah~~~~va~~l~~~G~~g~~------vas~~Ea~~l~~----~Gi~~ill~~~~~~~~~~~ 130 (426)
T 3gwq_A 61 KWMQAFVAEYGVKLAPHGKTTMAPQLFRRQLETGAWGIT------LATAHQVRAAYH----GGVSRVLMANQLVGRRNMM 130 (426)
T ss_dssp HHHHHHHHHHCCEECCBCTTTCCHHHHHHHHHTTCCCEE------ESSHHHHHHHHH----TTCCEEEECSCCCSHHHHH
T ss_pred HHHHHHHhhcCCEEEEEEccCCCHHHHHHHHHCCCCeEE------EeCHHHHHHHHH----CCCCeEEEECCcCCHHHHH
Confidence 34555554323333322333 467888888888987554 355666665443 23 3456666655677776
Q ss_pred HHHhcCC--CeEeecCCCCHHHHHHHHHHcC
Q 018508 152 KALDLGP--QGVMFPMIDSPEAAKEAVSYCR 180 (355)
Q Consensus 152 ~aLdaGa--~GImvP~Vesaeea~~vv~a~~ 180 (355)
++.+.-. ..=+.+.|++.++++.+.+.+.
T Consensus 131 ~~~~l~~~~~~~l~~~Vds~~~l~~L~~~a~ 161 (426)
T 3gwq_A 131 MVAELLSDPEFEFFCLVDSVEGVEQLGEFFK 161 (426)
T ss_dssp HHHHHTTCTTCEEEEEECCHHHHHHHHHHHH
T ss_pred HHHHHhhcCCccEEEEeCCHHHHHHHHHHHH
Confidence 6654311 1124788999999999988764
No 492
>3gg8_A Pyruvate kinase; malaria, genomics, proteomics, glycolysis, magnesium, transferase, structural genomics, STRU genomics consortium, SGC; 2.21A {Toxoplasma gondii} PDB: 3eoe_A
Probab=33.98 E-value=72 Score=32.43 Aligned_cols=89 Identities=16% Similarity=0.079 Sum_probs=56.0
Q ss_pred chHHHHHHHcCCcEEEEEEecCCHHHHH----HhhhcCCcEEEEe---C--CCCCCCHHHHH-HHHHHHHhCCCCeEE--
Q 018508 73 PESLKYRLQSNETLYGLFLLSFSPTLAE----ISGLAGYDFVVVD---M--EHGPGGISDAL-ACLHALAATGTPAIL-- 140 (355)
Q Consensus 73 ~n~lk~~L~~G~~~~gl~v~~~sp~~~e----~aa~~G~D~vilD---l--Eh~~~~~~~a~-~~i~a~~~~g~~~iV-- 140 (355)
...+|+.|...+.-+.++..+-+++.++ ++.. .|.|++- | |-+......++ .+++.++..|+++++
T Consensus 236 v~~~r~~l~~~~~~~~iiaKIE~~eav~nldeIl~~--sDgimVaRGDLgvei~~e~v~~~qk~ii~~~~~~gkpvi~AT 313 (511)
T 3gg8_A 236 VRYIRGLLGPRGRHIRIIPKIENVEGLVNFDEILAE--ADGIMIARGDLGMEIPPEKVFLAQKMMIAKCNVVGKPVITAT 313 (511)
T ss_dssp HHHHHHHHTGGGTTCEEEEEECSHHHHHTHHHHHHH--CSCEEEEHHHHHHHSCHHHHHHHHHHHHHHHHHTTCCEEEES
T ss_pred HHHHHHHHHhcCCCCeEEEEECCHHHHHhHHHHHHh--CCeEEEecchhcCcCCHHHHHHHHHHHHHHHHHcCCCeEEeh
Confidence 4678888865434568888899888663 3333 5889883 2 22221222333 356778888999887
Q ss_pred -------cCCCCCHHH---HHHHHhcCCCeEee
Q 018508 141 -------RLPESCPTW---AKKALDLGPQGVMF 163 (355)
Q Consensus 141 -------RV~~~~~~~---i~~aLdaGa~GImv 163 (355)
+=|-+.... +..+.--|+|+||+
T Consensus 314 QmLeSMi~~p~PTRAEvsDVAnAV~dGaDavML 346 (511)
T 3gg8_A 314 QMLESMIKNPRPTRAEAADVANAVLDGTDCVML 346 (511)
T ss_dssp SSSGGGGTCSSCCHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHhhcCCCccHHHHHHHHHHHHhCCCEEEe
Confidence 444444443 34455569999999
No 493
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=33.82 E-value=1.3e+02 Score=27.35 Aligned_cols=69 Identities=12% Similarity=0.064 Sum_probs=47.0
Q ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHHh-C-CCCeEEcCCCCCHHHHHHHHhcCCCeEeec--CCCCHHHHHHHHHHc
Q 018508 106 GYDFVVVDMEHGPGGISDALACLHALAA-T-GTPAILRLPESCPTWAKKALDLGPQGVMFP--MIDSPEAAKEAVSYC 179 (355)
Q Consensus 106 G~D~vilDlEh~~~~~~~a~~~i~a~~~-~-g~~~iVRV~~~~~~~i~~aLdaGa~GImvP--~Vesaeea~~vv~a~ 179 (355)
|+.||.++. -+... ..++++.++. . ..+++|--.=.++++.++++. ||+||++= .+++++.++++++..
T Consensus 159 g~~~vY~e~-sG~~g---~~~~v~~ir~~~~~~pv~vGfGI~~~e~a~~~~~-gAD~VVVGSai~~~~~~~~e~v~~v 231 (235)
T 3w01_A 159 RLPVMYIEY-SGIYG---DVSKVQAVSEHLTETQLFYGGGISSEQQATEMAA-IADTIIVGDIIYKDIKKALKTVKIK 231 (235)
T ss_dssp CCSEEEEEC-TTSCC---CHHHHHHHHTTCSSSEEEEESCCCSHHHHHHHHT-TSSEEEECTHHHHCHHHHHHTTCC-
T ss_pred CCCEEEEec-CCCcC---CHHHHHHHHHhcCCCCEEEECCcCCHHHHHHHHc-CCCEEEECCceecCHHHHHHHHHHH
Confidence 889999998 55443 2344555443 3 567788776678899998887 99999973 345666666655443
No 494
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=33.72 E-value=1e+02 Score=29.05 Aligned_cols=77 Identities=17% Similarity=0.020 Sum_probs=51.8
Q ss_pred HHHHHhhhcCCcEEEEeCCCC---CCCHHHHHHHHHHHH---hCCCCeEEcCCCCCHHH----HHHHHhcCCCeEee--c
Q 018508 97 TLAEISGLAGYDFVVVDMEHG---PGGISDALACLHALA---ATGTPAILRLPESCPTW----AKKALDLGPQGVMF--P 164 (355)
Q Consensus 97 ~~~e~aa~~G~D~vilDlEh~---~~~~~~a~~~i~a~~---~~g~~~iVRV~~~~~~~----i~~aLdaGa~GImv--P 164 (355)
..++.+...|.|.|++=---| ..+.++-.++++.+. ....++++=+...+... .+.+-++|+++||+ |
T Consensus 59 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P 138 (332)
T 2r8w_A 59 ALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGIGALRTDEAVALAKDAEAAGADALLLAPV 138 (332)
T ss_dssp HHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECCSSHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 456667788999999876444 456666666665432 24577888888877643 46678899999775 5
Q ss_pred CC--CCHHHHH
Q 018508 165 MI--DSPEAAK 173 (355)
Q Consensus 165 ~V--esaeea~ 173 (355)
.- -|.+++.
T Consensus 139 ~Y~~~s~~~l~ 149 (332)
T 2r8w_A 139 SYTPLTQEEAY 149 (332)
T ss_dssp CSSCCCHHHHH
T ss_pred CCCCCCHHHHH
Confidence 43 2555554
No 495
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=33.71 E-value=2.2e+02 Score=28.94 Aligned_cols=96 Identities=16% Similarity=0.195 Sum_probs=61.4
Q ss_pred CCcEEEEEEecC------------CHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcC-----CCC
Q 018508 83 NETLYGLFLLSF------------SPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRL-----PES 145 (355)
Q Consensus 83 G~~~~gl~v~~~------------sp~~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV-----~~~ 145 (355)
....+..|+... ....++.+..+|.|.|-|= .+..+.+.++..+..+...|..+-+-+ +..
T Consensus 95 ~~~~l~~L~R~~N~~G~~~ypddv~~~~ve~a~~aGvd~vrIf--~s~sd~~ni~~~i~~ak~~G~~v~~~i~~~~~~~~ 172 (539)
T 1rqb_A 95 PNSRLQMLLRGQNLLGYRHYNDEVVDRFVDKSAENGMDVFRVF--DAMNDPRNMAHAMAAVKKAGKHAQGTICYTISPVH 172 (539)
T ss_dssp TTSCEEEEECGGGTTSSSCCCHHHHHHHHHHHHHTTCCEEEEC--CTTCCTHHHHHHHHHHHHTTCEEEEEEECCCSTTC
T ss_pred CCCEEEEEeccccccCcccCcccccHHHHHHHHhCCCCEEEEE--EehhHHHHHHHHHHHHHHCCCeEEEEEEeeeCCCC
Confidence 356666676322 2346788888999875432 334445677777777777776542122 112
Q ss_pred CHH----HHHHHHhcCCCeEeecC---CCCHHHHHHHHHHcC
Q 018508 146 CPT----WAKKALDLGPQGVMFPM---IDSPEAAKEAVSYCR 180 (355)
Q Consensus 146 ~~~----~i~~aLdaGa~GImvP~---Vesaeea~~vv~a~~ 180 (355)
++. .++++.++|++.|.++- +-++.++.+++++++
T Consensus 173 ~~e~~~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~ 214 (539)
T 1rqb_A 173 TVEGYVKLAGQLLDMGADSIALKDMAALLKPQPAYDIIKAIK 214 (539)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEETTCCCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCCCCCCcCHHHHHHHHHHHH
Confidence 333 35678889999998884 467999988888774
No 496
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=33.50 E-value=1.1e+02 Score=28.44 Aligned_cols=78 Identities=22% Similarity=0.195 Sum_probs=43.9
Q ss_pred HHHHHHHHHHhccCCccEEEE-ChhhHHhhcCCCCCCCCHHHHHHHHHHHHHHHhCCCceeecccCC-c----hhHHHHH
Q 018508 222 EEGVKRAEDIAAVDGVDCVQM-GPLDLSASMGYLWDPGHRKVREMMRVAEKGVLGGGKAYLAGFAMP-H----DAPLEMK 295 (355)
Q Consensus 222 ~~av~nieeIaavpgVD~l~i-Gp~DLs~slG~~~~~~~p~v~~ai~~iv~aa~a~g~~~~g~~~~d-~----~~a~~~~ 295 (355)
.+++..+=+-.--.|||+|++ |+.==+.+ ....+-.+.++.+++.+..+..+++.++... . +.++...
T Consensus 27 ~~~l~~lv~~li~~Gv~gl~v~GttGE~~~------Ls~~Er~~v~~~~~~~~~g~rvpviaGvg~~~t~~ai~la~~a~ 100 (301)
T 3m5v_A 27 EQSYARLIKRQIENGIDAVVPVGTTGESAT------LTHEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKFAK 100 (301)
T ss_dssp HHHHHHHHHHHHHTTCCEEECSSTTTTGGG------SCHHHHHHHHHHHHHHHTTSSCEEEEECCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEECccccChhh------CCHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHHHHH
Confidence 455555444443369999887 44321111 2344555666666665532134555555443 2 5567788
Q ss_pred HCCCCEEEec
Q 018508 296 SRGYHMVSGA 305 (355)
Q Consensus 296 ~~G~~~vs~~ 305 (355)
+.|++.+.+.
T Consensus 101 ~~Gadavlv~ 110 (301)
T 3m5v_A 101 EHGADGILSV 110 (301)
T ss_dssp HTTCSEEEEE
T ss_pred HcCCCEEEEc
Confidence 9999986554
No 497
>3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi}
Probab=33.49 E-value=1.5e+02 Score=27.22 Aligned_cols=71 Identities=13% Similarity=0.088 Sum_probs=0.0
Q ss_pred HHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHhCCCCeEEcCCCCCHHHHHHHHhcCCCeEeecCCCCHHHHHHHHH
Q 018508 98 LAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVS 177 (355)
Q Consensus 98 ~~e~aa~~G~D~vilDlEh~~~~~~~a~~~i~a~~~~g~~~iVRV~~~~~~~i~~aLdaGa~GImvP~Vesaeea~~vv~ 177 (355)
..+.+...|++++-.+..... ...++.++..|..++|=. -.++..++++++.|++||+ .+.++.++++++
T Consensus 237 l~~~~~~~~~~~~~~~~~~~~------~~~v~~~~~~Gl~V~~WT-Vn~~~~~~~l~~~GVDgIi---TD~P~~~~~~l~ 306 (313)
T 3l12_A 237 LPQAVASAGGQLWCPYFLDVT------PELVAEAHDLGLIVLTWT-VNEPEDIRRMATTGVDGIV---TDYPGRTQRILI 306 (313)
T ss_dssp HHHHHHHHTCSEEEEBGGGCC------HHHHHHHHHTTCEEEEBC-CCSHHHHHHHHHHTCSEEE---ESCHHHHHHHHH
T ss_pred HHHHHHHhCCcEEecchhcCC------HHHHHHHHHCCCEEEEEc-CCCHHHHHHHHHcCCCEEE---eCCHHHHHHHHH
Q ss_pred H
Q 018508 178 Y 178 (355)
Q Consensus 178 a 178 (355)
.
T Consensus 307 ~ 307 (313)
T 3l12_A 307 D 307 (313)
T ss_dssp H
T ss_pred h
No 498
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=33.47 E-value=2.9e+02 Score=25.54 Aligned_cols=110 Identities=10% Similarity=0.106 Sum_probs=67.0
Q ss_pred eEEEEEEccHHHHHHHHHHhccCCccEEEEChhhHHhhcCCCCCCCCHHHHHHHHHHHHHHHhCCCceeecc---c----
Q 018508 213 LLIMCQVESEEGVKRAEDIAAVDGVDCVQMGPLDLSASMGYLWDPGHRKVREMMRVAEKGVLGGGKAYLAGF---A---- 285 (355)
Q Consensus 213 i~vi~mIET~~av~nieeIaavpgVD~l~iGp~DLs~slG~~~~~~~p~v~~ai~~iv~aa~a~g~~~~g~~---~---- 285 (355)
+.+.+++....+++.+-+ +.++.| .+++..+|+-..-.+. ....+.++.+.++++.++++|+.+.+.+ +
T Consensus 75 ~~~~~l~~~~~~i~~a~~-~g~~~v-~i~~~~sd~~~~~~l~--~s~~e~l~~~~~~v~~ak~~G~~v~~~i~~~~~~~~ 150 (307)
T 1ydo_A 75 VTYAALVPNQRGLENALE-GGINEA-CVFMSASETHNRKNIN--KSTSESLHILKQVNNDAQKANLTTRAYLSTVFGCPY 150 (307)
T ss_dssp CEEEEECCSHHHHHHHHH-HTCSEE-EEEEESSHHHHHTTTC--SCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTT
T ss_pred CeEEEEeCCHHhHHHHHh-CCcCEE-EEEeecCHHHHHHHhC--CCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEecCCc
Confidence 344555556666655544 223322 3566778875544332 2346788888899999999998753322 1
Q ss_pred ---CCc----hhHHHHHHCCCCEEEecchHHHH-HHHHHHHHHHHHHhc
Q 018508 286 ---MPH----DAPLEMKSRGYHMVSGAVDVGLF-RSAAVEDVARFKMNL 326 (355)
Q Consensus 286 ---~d~----~~a~~~~~~G~~~vs~~~D~~ll-~~~~~~~~~~~r~~~ 326 (355)
.++ +.++.+.+.|.+.+++...++++ =....+.+..+|...
T Consensus 151 ~~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~ 199 (307)
T 1ydo_A 151 EKDVPIEQVIRLSEALFEFGISELSLGDTIGAANPAQVETVLEALLARF 199 (307)
T ss_dssp TBCCCHHHHHHHHHHHHHHTCSCEEEECSSCCCCHHHHHHHHHHHHTTS
T ss_pred CCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCcCHHHHHHHHHHHHHhC
Confidence 123 33567789999999888666543 334456666666644
No 499
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=33.20 E-value=1.6e+02 Score=27.18 Aligned_cols=77 Identities=17% Similarity=0.141 Sum_probs=51.0
Q ss_pred HHHHHhhhcCCcEEEEeCCCC---CCCHHHHHHHHHHHH---hC-CCCeEEcCCCCCHHH----HHHHHhcCCCeEee--
Q 018508 97 TLAEISGLAGYDFVVVDMEHG---PGGISDALACLHALA---AT-GTPAILRLPESCPTW----AKKALDLGPQGVMF-- 163 (355)
Q Consensus 97 ~~~e~aa~~G~D~vilDlEh~---~~~~~~a~~~i~a~~---~~-g~~~iVRV~~~~~~~----i~~aLdaGa~GImv-- 163 (355)
..++.+...|.|.+++=---| ..+.++-.++++.+. .. +.++++=+...+... .+.+-++|+++||+
T Consensus 32 ~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~ 111 (301)
T 3m5v_A 32 RLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKFAKEHGADGILSVA 111 (301)
T ss_dssp HHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 355677789999999875544 356666666655432 23 578899888877653 56788899999764
Q ss_pred cCC--CCHHHHH
Q 018508 164 PMI--DSPEAAK 173 (355)
Q Consensus 164 P~V--esaeea~ 173 (355)
|.- -|.+++.
T Consensus 112 P~y~~~s~~~l~ 123 (301)
T 3m5v_A 112 PYYNKPTQQGLY 123 (301)
T ss_dssp CCSSCCCHHHHH
T ss_pred CCCCCCCHHHHH
Confidence 543 2445543
No 500
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=33.04 E-value=1.5e+02 Score=28.58 Aligned_cols=79 Identities=14% Similarity=0.116 Sum_probs=51.8
Q ss_pred HHHHHhhhcCCcEEEEeCCCC---CCCHHHHHHHHHHH-H--hCCCCeEEcCCCCCHHH----HHHHHhcCCCeEee--c
Q 018508 97 TLAEISGLAGYDFVVVDMEHG---PGGISDALACLHAL-A--ATGTPAILRLPESCPTW----AKKALDLGPQGVMF--P 164 (355)
Q Consensus 97 ~~~e~aa~~G~D~vilDlEh~---~~~~~~a~~~i~a~-~--~~g~~~iVRV~~~~~~~----i~~aLdaGa~GImv--P 164 (355)
..++.+...|.|.+++=.--| ..+.++-.++++.+ + ..+.++++=+...+... .+.+.++|+++||+ |
T Consensus 84 ~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlvv~P 163 (360)
T 4dpp_A 84 DLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNTGSNSTREAIHATEQGFAVGMHAALHINP 163 (360)
T ss_dssp HHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 456677789999999976444 35666655555543 2 34567888888777643 46788899999775 5
Q ss_pred CCC--CHHHHHHH
Q 018508 165 MID--SPEAAKEA 175 (355)
Q Consensus 165 ~Ve--saeea~~v 175 (355)
.-. |.+++.+-
T Consensus 164 yY~k~sq~gl~~h 176 (360)
T 4dpp_A 164 YYGKTSIEGLIAH 176 (360)
T ss_dssp CSSCCCHHHHHHH
T ss_pred CCCCCCHHHHHHH
Confidence 443 45554433
Done!