Query 018510
Match_columns 355
No_of_seqs 148 out of 1183
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 16:23:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018510.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018510hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gp6_A Leucoanthocyanidin diox 100.0 4.1E-82 1.4E-86 606.1 30.7 335 9-344 3-351 (356)
2 1w9y_A 1-aminocyclopropane-1-c 100.0 7.4E-76 2.5E-80 554.5 24.1 299 45-351 2-307 (319)
3 3oox_A Putative 2OG-Fe(II) oxy 100.0 2.2E-74 7.6E-79 543.9 28.0 291 45-338 5-309 (312)
4 1dcs_A Deacetoxycephalosporin 100.0 1.9E-71 6.4E-76 523.2 19.4 279 45-340 3-307 (311)
5 1odm_A Isopenicillin N synthas 100.0 3.4E-70 1.1E-74 519.1 26.7 284 44-339 6-325 (331)
6 3on7_A Oxidoreductase, iron/as 100.0 1E-65 3.5E-70 477.1 25.1 260 45-338 2-277 (280)
7 3dkq_A PKHD-type hydroxylase S 96.1 0.019 6.6E-07 51.0 8.6 105 178-300 74-194 (243)
8 2rg4_A Uncharacterized protein 93.4 1 3.4E-05 39.1 12.0 43 249-303 166-209 (216)
9 2hbt_A EGL nine homolog 1; pro 91.5 0.55 1.9E-05 41.7 7.9 183 65-300 16-212 (247)
10 2jig_A Prolyl-4 hydroxylase; h 86.5 1.2 4E-05 38.6 6.2 88 204-301 99-217 (224)
11 3itq_A Prolyl 4-hydroxylase, a 83.5 4.3 0.00015 35.1 8.2 104 178-300 94-211 (216)
12 3s57_A Alpha-ketoglutarate-dep 82.8 3.2 0.00011 35.5 7.2 81 203-298 100-200 (204)
13 2iuw_A Alkylated repair protei 82.4 4.2 0.00014 35.6 7.9 85 203-300 126-229 (238)
14 3i3q_A Alpha-ketoglutarate-dep 71.8 7.8 0.00027 33.3 6.4 80 203-299 105-201 (211)
15 3tht_A Alkylated DNA repair pr 68.8 5.1 0.00018 37.2 4.8 95 202-304 197-316 (345)
16 2dbn_A Hypothetical protein YB 62.3 5.5 0.00019 38.2 3.7 54 44-102 98-151 (461)
17 3o2g_A Gamma-butyrobetaine dio 51.9 5.9 0.0002 37.3 2.0 52 46-103 122-173 (388)
18 3ghf_A Septum site-determining 41.7 29 0.00098 26.8 4.2 36 49-88 51-86 (120)
19 1otj_A Alpha-ketoglutarate-dep 37.7 29 0.00099 30.6 4.2 44 43-90 14-57 (283)
20 4ay7_A Methylcobalamin\: coenz 36.4 75 0.0026 28.9 7.0 47 55-102 298-348 (348)
21 3kt7_A PKHD-type hydroxylase T 34.9 1.4E+02 0.0047 29.8 8.7 102 178-300 105-227 (633)
22 3rcq_A Aspartyl/asparaginyl be 33.9 60 0.002 27.4 5.3 42 263-304 141-187 (197)
23 2da7_A Zinc finger homeobox pr 31.4 21 0.00071 24.9 1.6 42 159-200 14-55 (71)
24 1oih_A Putative alkylsulfatase 30.0 45 0.0016 29.7 4.2 53 43-102 24-77 (301)
25 2opi_A L-fuculose-1-phosphate 25.9 35 0.0012 28.9 2.5 36 46-85 125-160 (212)
26 1e5r_A Proline oxidase; oxidor 25.4 73 0.0025 28.6 4.6 65 221-299 103-175 (290)
27 3pvj_A Alpha-ketoglutarate-dep 22.6 63 0.0022 28.5 3.6 51 43-100 12-62 (277)
28 2fk5_A Fuculose-1-phosphate al 20.4 57 0.0019 27.3 2.7 36 46-85 117-153 (200)
No 1
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=4.1e-82 Score=606.09 Aligned_cols=335 Identities=32% Similarity=0.608 Sum_probs=300.1
Q ss_pred CchhHHHHHhCCCCCCCCCCCCCCCCCCCCCC---CC---CCCCCceeeCCCCCCCCch--hHHHHHHHHHHhhcceEEE
Q 018510 9 LVPSVQELAENPMVAVPPRYIRPEQDAPVISD---NT---LISKFPVIDMQSLLSEESV--DSELANLDFACREWGFFQL 80 (355)
Q Consensus 9 ~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~---~~---~~~~iPvIDls~l~~~d~~--~~~~~~l~~A~~~~Gff~l 80 (355)
++++||+|+++|+.+||+.|++|+++++.... .. ...+||||||+.+.+++.. .+.+++|.+||++||||||
T Consensus 3 ~~~~v~~l~~~~~~~vP~~~~~p~~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF~v 82 (356)
T 1gp6_A 3 AVERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHL 82 (356)
T ss_dssp CCCCHHHHHHTTCSSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEE
T ss_pred CcccHHHHHhcCCCCCCHHhcCCchhcccccccccccccccCCCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCEEEE
Confidence 57889999999999999999999877654321 00 0246999999999765542 2356999999999999999
Q ss_pred EecCCCHHHHHHHHHHHHHHhcCCHHHHhhhccCC--CCcccccccccccccccCCcccccccccCcccCCCCCCCCCCC
Q 018510 81 VNHGVSLALVDKVKKEIQEFFNLSMEEKKKYWQYP--GEVEGFGQAFVVSEEQRLDWGDLFFMTTLPVHLRKPHLFPKLP 158 (355)
Q Consensus 81 ~nhgi~~~l~~~~~~~~~~fF~lP~e~K~~~~~~~--~~~~Gy~~~~~~~~~~~~d~~e~~~~~~~p~~~~~~n~wP~~~ 158 (355)
+||||+.++++++++.+++||+||.|+|+++.... ..++||+........+..||+|.|++...|.....+|.||+.+
T Consensus 83 ~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~~p~~~~~~~~wP~~~ 162 (356)
T 1gp6_A 83 INHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTP 162 (356)
T ss_dssp ESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCCSS
T ss_pred eCCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhheeeeecCCccccccccCCCcc
Confidence 99999999999999999999999999999997754 3689998766555567889999999887665446789999999
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHhhh---cccceeeeeccCCCCCCCCcccccCccCCCceEEEE
Q 018510 159 PSLRDTLEVYSTEVNALAMNLISRMAKVLHIKDEEVREFFE---NGLQSMRMNYYPPCPQPGKVMGLTPHSDSVALTILL 235 (355)
Q Consensus 159 ~~fr~~~~~y~~~~~~la~~ll~~l~~~Lgl~~~~~~~~~~---~~~~~lrl~~Yp~~~~~~~~~~~~~HtD~~~lTll~ 235 (355)
+.||+.+++|+++|.+|+..||++|+++||+++++|.+.+. .+.+.||++|||||++++..+|+++|||+|+||||+
T Consensus 163 ~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~ 242 (356)
T 1gp6_A 163 SDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFIL 242 (356)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEEE
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcccCCccceeeeeecCCCCCcccccCcCCccCCCeEEEEE
Confidence 99999999999999999999999999999999999999987 467899999999999888889999999999999999
Q ss_pred eCCCCCceeEeeCCeeEeccCCCCeEEEEecchhhhhhCCcccccccccccCCCCCeeEEEEeecCCCCc-EEecCCCcc
Q 018510 236 QINEAEGLQIKKDGKWFPVRPLPNAFIVNIGDMLEVITNGVYPSIEHRAVVNSEQERLSIATFHLVKYDG-EVGPAPSLI 314 (355)
Q Consensus 236 q~~~~~GLqv~~~g~W~~V~p~~g~~vVnvGd~L~~~TnG~~~s~~HRVv~~~~~~R~Si~~F~~p~~d~-~i~pl~~~~ 314 (355)
| ++++||||+++|+|++|+|+||++|||+||+||+||||+||||+|||+.++..+|||++||++|+.|+ +|.|+++|+
T Consensus 243 q-d~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~~i~pl~~~~ 321 (356)
T 1gp6_A 243 H-NMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMV 321 (356)
T ss_dssp E-CSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGGGC
T ss_pred E-cCCCCeEEecCCcEEECcCCCCeEEEEeccHHHHhcCCEeeccCceecCCCCCCEEEEEEeecCCCCCcEEeCChhhc
Confidence 9 57999999999999999999999999999999999999999999999998888999999999999999 999999999
Q ss_pred CCCCCCCCCcccHHHHHHHHHhhccccccc
Q 018510 315 TEKTPALFRRVTTEEFLKAVFSRELHEKSL 344 (355)
Q Consensus 315 ~~~~~~~y~~~~~~e~~~~~~~~~~~~~~~ 344 (355)
++++|++|++++++||+..+++.+++|+..
T Consensus 322 ~~~~p~~y~~~t~~eyl~~~~~~~~d~~~~ 351 (356)
T 1gp6_A 322 SVESPAKFPPRTFAQHIEHKLFGKEQEELV 351 (356)
T ss_dssp CSSSCCSSCCEEHHHHHHHHHHHHHHHHC-
T ss_pred CCCCCccCCCccHHHHHHHHHHhccCcchh
Confidence 998999999999999999999998877653
No 2
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=7.4e-76 Score=554.50 Aligned_cols=299 Identities=28% Similarity=0.576 Sum_probs=264.5
Q ss_pred CCCceeeCCCCCCCCchhHHHHHHHHHHhhcceEEEEecCCCHHHHHHHHHHHHHHhcCCHHHHhhhccCCCCccccccc
Q 018510 45 SKFPVIDMQSLLSEESVDSELANLDFACREWGFFQLVNHGVSLALVDKVKKEIQEFFNLSMEEKKKYWQYPGEVEGFGQA 124 (355)
Q Consensus 45 ~~iPvIDls~l~~~d~~~~~~~~l~~A~~~~Gff~l~nhgi~~~l~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~Gy~~~ 124 (355)
.+||||||+.+...+ ..+.+++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... .+||+..
T Consensus 2 ~~iPvIDls~l~~~~-~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~---~~Gy~~~ 77 (319)
T 1w9y_A 2 ENFPIISLDKVNGVE-RAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVA---SKALEGV 77 (319)
T ss_dssp CCCCEEEGGGGGSTT-HHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHTTC
T ss_pred CCCCEEECcccCccc-HHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccC---CCCCCcc
Confidence 359999999985322 234679999999999999999999999999999999999999999999998642 3488654
Q ss_pred ccccccccCCcccccccccCcccCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHhhhc---c
Q 018510 125 FVVSEEQRLDWGDLFFMTTLPVHLRKPHLFPKLPPSLRDTLEVYSTEVNALAMNLISRMAKVLHIKDEEVREFFEN---G 201 (355)
Q Consensus 125 ~~~~~~~~~d~~e~~~~~~~p~~~~~~n~wP~~~~~fr~~~~~y~~~~~~la~~ll~~l~~~Lgl~~~~~~~~~~~---~ 201 (355)
. .+.+..||+|.+++...|. ..+|.||+.++.||+.+++|+++|.+++..||++|+++||+++++|.+.+.. +
T Consensus 78 ~--~e~~~~d~ke~~~~~~~p~--~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~ 153 (319)
T 1w9y_A 78 Q--AEVTDMDWESTFFLKHLPI--SNISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGP 153 (319)
T ss_dssp C--CCGGGCCCCEEEEEEEESC--CGGGGCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHHHHTTTCC
T ss_pred c--ccCCCCChhhheeeecCCc--ccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCcCCc
Confidence 2 2346789999998876553 3578999999999999999999999999999999999999999999998874 4
Q ss_pred cceeeeeccCCCCCCCCcccccCccCCCceEEEEeCCCCCceeEeeCCeeEeccCCCCeEEEEecchhhhhhCCcccccc
Q 018510 202 LQSMRMNYYPPCPQPGKVMGLTPHSDSVALTILLQINEAEGLQIKKDGKWFPVRPLPNAFIVNIGDMLEVITNGVYPSIE 281 (355)
Q Consensus 202 ~~~lrl~~Yp~~~~~~~~~~~~~HtD~~~lTll~q~~~~~GLqv~~~g~W~~V~p~~g~~vVnvGd~L~~~TnG~~~s~~ 281 (355)
.+.||++|||||++++..+|+++|||+|+||||+|+++++||||+++|+|++|+|+||++|||+||+||+||||+||||+
T Consensus 154 ~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~SnG~~kS~~ 233 (319)
T 1w9y_A 154 NFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVM 233 (319)
T ss_dssp EEEEEEEECCCCSCGGGGSSCCCBCCSSSEEEEEESSSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCC
T ss_pred cceeEEEecCCCcccccccccccccCCCceEEEEecCCCCeeeEeeCCeEEEcccCCCcEEEEhHHHHHHHhCCeeeccc
Confidence 67899999999998888899999999999999999547999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCeeEEEEeecCCCCcEEecCCCccCCC---CCCCCCcccHHHHHHHHHhhccccccc-chhhccc
Q 018510 282 HRAVVNSEQERLSIATFHLVKYDGEVGPAPSLITEK---TPALFRRVTTEEFLKAVFSRELHEKSL-LDYMRIE 351 (355)
Q Consensus 282 HRVv~~~~~~R~Si~~F~~p~~d~~i~pl~~~~~~~---~~~~y~~~~~~e~~~~~~~~~~~~~~~-~~~~~~~ 351 (355)
|||+.+++++|||++||++|+.|++|.|+|+|++++ +|++|++++++||++.+++..+.++.. ++.+||.
T Consensus 234 HRVv~~~~~~R~Sia~F~~p~~d~~i~pl~~l~~~~~~~~p~~Y~~~t~~ey~~~~~~~~~~~~~~~~~~~~~~ 307 (319)
T 1w9y_A 234 HRVIAQKDGARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGLKFQAKEPRFEAMKAM 307 (319)
T ss_dssp EEECCCSSSCCEEEEEEEECCTTCEECCCGGGC--------CCCCCEEHHHHHHTTTTTTCSSHHHHHHHHHHC
T ss_pred ceecCCCCCCceEEEEEecCCCCCeEeCchhhcCcccccCccccCcEeHHHHHHHHHhhhcCcchhHHHHHHHH
Confidence 999998888999999999999999999999999887 599999999999999999998888764 6777775
No 3
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=2.2e-74 Score=543.85 Aligned_cols=291 Identities=24% Similarity=0.419 Sum_probs=257.2
Q ss_pred CCCceeeCCCCCCCCchhHHHHHHHHHHhhcceEEEEecCCCHHHHHHHHHHHHHHhcCCHHHHhhhccCCCCccccccc
Q 018510 45 SKFPVIDMQSLLSEESVDSELANLDFACREWGFFQLVNHGVSLALVDKVKKEIQEFFNLSMEEKKKYWQYPGEVEGFGQA 124 (355)
Q Consensus 45 ~~iPvIDls~l~~~d~~~~~~~~l~~A~~~~Gff~l~nhgi~~~l~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~Gy~~~ 124 (355)
.+||||||+.+.+ +. .+.+++|.+||+++|||||+||||+.++++++++.+++||+||.|+|+++.......+||...
T Consensus 5 ~~iPvIDls~~~~-~~-~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~Gy~~~ 82 (312)
T 3oox_A 5 SAIDPVSFSLYAK-DF-TRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGVKGGARGYIPF 82 (312)
T ss_dssp CSSCCEETHHHHH-CH-HHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSSGGGTSEEECC
T ss_pred CCCCeEEChHhcc-cH-HHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccCCCCccccccc
Confidence 5699999998854 22 346799999999999999999999999999999999999999999999997644567899764
Q ss_pred cccc--ccccCCcccccccccC-cc-----cCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHH
Q 018510 125 FVVS--EEQRLDWGDLFFMTTL-PV-----HLRKPHLFPKLPPSLRDTLEVYSTEVNALAMNLISRMAKVLHIKDEEVRE 196 (355)
Q Consensus 125 ~~~~--~~~~~d~~e~~~~~~~-p~-----~~~~~n~wP~~~~~fr~~~~~y~~~~~~la~~ll~~l~~~Lgl~~~~~~~ 196 (355)
+.+. .....||+|.|.++.. +. ....+|.||+.+++||+.+++|+++|.+++..||++|+++||+++++|.+
T Consensus 83 g~e~~~~~~~~D~kE~~~~~~~~~~~~~~~~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~ 162 (312)
T 3oox_A 83 GVETAKGADHYDLKEFWHMGRDLPPGHRFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLERDFFKP 162 (312)
T ss_dssp CCCCSTTSCSCCCCEEEEECCCCCTTCGGGGTSCCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTTHH
T ss_pred cceecCCCCCCCceeeeEeecCCCcCCcchhccCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHH
Confidence 4332 2356899998887542 11 12457999999999999999999999999999999999999999999999
Q ss_pred hhhcccceeeeeccCCCCCCCCcccccCccCCCceEEEEeCCCCCceeEee-CCeeEeccCCCCeEEEEecchhhhhhCC
Q 018510 197 FFENGLQSMRMNYYPPCPQPGKVMGLTPHSDSVALTILLQINEAEGLQIKK-DGKWFPVRPLPNAFIVNIGDMLEVITNG 275 (355)
Q Consensus 197 ~~~~~~~~lrl~~Yp~~~~~~~~~~~~~HtD~~~lTll~q~~~~~GLqv~~-~g~W~~V~p~~g~~vVnvGd~L~~~TnG 275 (355)
.+..+.+.||++|||||+.++..+|+++|||+|+||||+| ++++||||+. +|+|++|+|+||++||||||+||+||||
T Consensus 163 ~~~~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~g~lTlL~q-d~v~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~TnG 241 (312)
T 3oox_A 163 TVQDGNSVLRLLHYPPIPKDATGVRAGAHGDINTITLLLG-AEEGGLEVLDRDGQWLPINPPPGCLVINIGDMLERLTNN 241 (312)
T ss_dssp HHTTCCCEEEEEEECCCSSCCC--CEEEECCCSSEEEEEC-CTTSCEEEECTTSCEEECCCCSSCEEEEECHHHHHHTTT
T ss_pred HhcCCcceeeeEecCCCCCCcCCcCccceecCceEEEEeE-cCcCceEEECCCCcEEECCCCCCeEEEEhHHHHHHHhCC
Confidence 9988889999999999987655599999999999999999 5799999975 8999999999999999999999999999
Q ss_pred cccccccccccCC----CCCeeEEEEeecCCCCcEEecCCCccCCCCCCCCC-cccHHHHHHHHHhhc
Q 018510 276 VYPSIEHRAVVNS----EQERLSIATFHLVKYDGEVGPAPSLITEKTPALFR-RVTTEEFLKAVFSRE 338 (355)
Q Consensus 276 ~~~s~~HRVv~~~----~~~R~Si~~F~~p~~d~~i~pl~~~~~~~~~~~y~-~~~~~e~~~~~~~~~ 338 (355)
+||||+|||+.++ ..+|||++||++|+.|++|.|+++|+++++|++|+ +++++||++.+++..
T Consensus 242 ~~kS~~HRVv~~~~~~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~t~~eyl~~r~~~~ 309 (312)
T 3oox_A 242 VLPSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTLQNCVTAENPDRYPESITADEFLQQRLREI 309 (312)
T ss_dssp SSCCCCEEECCCCGGGTTSCEEECCEEECCCTTCEECCCGGGCCSSSCCSCSSCEEHHHHHHHHHHHH
T ss_pred eecCCCceEeCCCccCCCCCEEEEEEEecCCCCcEEecCccccCCCCcccCCCCeeHHHHHHHHHHHh
Confidence 9999999998764 45799999999999999999999999999999999 999999999999864
No 4
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=100.00 E-value=1.9e-71 Score=523.21 Aligned_cols=279 Identities=18% Similarity=0.238 Sum_probs=239.5
Q ss_pred CCCceeeCCCCCCCCchhHHHHHHHHHHhhcceEEEEecCCCHHHHHHHHHHHHHHhcCC-HHHHhhhccCC-CCccccc
Q 018510 45 SKFPVIDMQSLLSEESVDSELANLDFACREWGFFQLVNHGVSLALVDKVKKEIQEFFNLS-MEEKKKYWQYP-GEVEGFG 122 (355)
Q Consensus 45 ~~iPvIDls~l~~~d~~~~~~~~l~~A~~~~Gff~l~nhgi~~~l~~~~~~~~~~fF~lP-~e~K~~~~~~~-~~~~Gy~ 122 (355)
.+||||||+.+.+++. . ++|.+||+++|||||+||||+.++++++++++++||+|| .|+|+++.... ...+||+
T Consensus 3 ~~iPvIDls~l~~~~~-~---~~l~~A~~~~GFf~l~nHGi~~~l~~~~~~~~~~fF~lP~~e~K~~~~~~~~~~~~Gy~ 78 (311)
T 1dcs_A 3 TTVPTFSLAELQQGLH-Q---DEFRRCLRDKGLFYLTDCGLTDTELKSAKDLVIDFFEHGSEAEKRAVTSPVPTMRRGFT 78 (311)
T ss_dssp CCCCEEEHHHHHTTCS-H---HHHHHHHHHTCEEEEESSSCCHHHHHHHHHHHHHHHHHCCHHHHHHTBCSSCCSSSEEE
T ss_pred CCCcEEEchhhcCCCH-H---HHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHcCCcHHHhHHhhccCCCCCCcee
Confidence 5699999998865543 2 399999999999999999999999999999999999999 99999998754 5689998
Q ss_pred ccccc------cccccCCcccccccccCcccCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHcCC----Chh
Q 018510 123 QAFVV------SEEQRLDWGDLFFMTTLPVHLRKPHLFPKLPPSLRDTLEVYSTEVNALAMNLISRMAKVLHI----KDE 192 (355)
Q Consensus 123 ~~~~~------~~~~~~d~~e~~~~~~~p~~~~~~n~wP~~~~~fr~~~~~y~~~~~~la~~ll~~l~~~Lgl----~~~ 192 (355)
..+.+ ...+..||+|.|++... +|.|| ++.|++.+++|+++|.+++..|+++|+++||+ +++
T Consensus 79 ~~~~e~~~~~~~~~~~~d~~E~~~~~~~------~n~wP--~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~ 150 (311)
T 1dcs_A 79 GLESESTAQITNTGSYSDYSMCYSMGTA------DNLFP--SGDFERIWTQYFDRQYTASRAVAREVLRATGTEPDGGVE 150 (311)
T ss_dssp EC-----------------CEEEEECSS------SCCCS--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCTTCHH
T ss_pred eccccccccccCCCCCCCcceeeeccCC------CCCCC--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCcHh
Confidence 75533 22467899999988753 68999 89999999999999999999999999999999 888
Q ss_pred HHHHhhhcccceeeeeccCCCCCCC--C--cccccCccCCCceEEEEeCCCCCc---eeEeeCCeeEeccCCCCeEEEEe
Q 018510 193 EVREFFENGLQSMRMNYYPPCPQPG--K--VMGLTPHSDSVALTILLQINEAEG---LQIKKDGKWFPVRPLPNAFIVNI 265 (355)
Q Consensus 193 ~~~~~~~~~~~~lrl~~Yp~~~~~~--~--~~~~~~HtD~~~lTll~q~~~~~G---Lqv~~~g~W~~V~p~~g~~vVnv 265 (355)
+|.+. .+.||++|||||++++ + .+|+++|||+|+||||+|+++++| |||+++|+|++|+|+||++|||+
T Consensus 151 ~f~~~----~~~lrl~~YPp~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~v~G~~~LqV~~~g~W~~V~p~pg~lvVNi 226 (311)
T 1dcs_A 151 AFLDC----EPLLRFRYFPQVPEHRSAEEQPLRMAPHYDLSMVTLIQQTPCANGFVSLQAEVGGAFTDLPYRPDAVLVFC 226 (311)
T ss_dssp HHHSC----CCEEEEEEECC-----------CCEEEEEECSSEEEEEEECCTTCCCCEEEEETTEEEECCCCTTCEEEEE
T ss_pred HHhhc----chhhheecCCCCCcccccCccccccccccCCCeEEEEecCCCCCCceeEEEEeCCEEEeCcCCCCeEEEEH
Confidence 88765 6889999999998753 3 678999999999999999427899 99999999999999999999999
Q ss_pred cchhhhhhCCcccccccccccCC-----CCCeeEEEEeecCCCCcEEecCCCccCCCCCCCC--CcccHHHHHHHHHhhc
Q 018510 266 GDMLEVITNGVYPSIEHRAVVNS-----EQERLSIATFHLVKYDGEVGPAPSLITEKTPALF--RRVTTEEFLKAVFSRE 338 (355)
Q Consensus 266 Gd~L~~~TnG~~~s~~HRVv~~~-----~~~R~Si~~F~~p~~d~~i~pl~~~~~~~~~~~y--~~~~~~e~~~~~~~~~ 338 (355)
||+||+||||+||||+|||+.++ ..+|||++||++|+.|++|. +|+|+++++|++| ++++++||++.++++.
T Consensus 227 GD~l~~~TnG~~kS~~HRVv~~~~~~~~~~~R~Si~~F~~p~~d~~i~-l~~~~~~~~p~~y~~~~~t~~ey~~~~~~~~ 305 (311)
T 1dcs_A 227 GAIATLVTGGQVKAPRHHVAAPRRDQIAGSSRTSSVFFLRPNADFTFS-VPLARECGFDVSLDGETATFQDWIGGNYVNI 305 (311)
T ss_dssp CHHHHHHTTSCSCCCCEEECCC----CTTCCEEEEEEEECCCTTCEEE-HHHHHHTTCCCCCCSSEEEHHHHHCSSCCCE
T ss_pred HHHHHHHhCCcccCCCceEeCCCcccCCCCCeEEEEEEEcCCCCcEEe-CCcccCCCCccccCCCCccHHHHHHHHHHHH
Confidence 99999999999999999999887 67899999999999999999 9999988899999 9999999999888776
Q ss_pred cc
Q 018510 339 LH 340 (355)
Q Consensus 339 ~~ 340 (355)
+.
T Consensus 306 ~~ 307 (311)
T 1dcs_A 306 RR 307 (311)
T ss_dssp EC
T ss_pred hc
Confidence 63
No 5
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=3.4e-70 Score=519.14 Aligned_cols=284 Identities=20% Similarity=0.316 Sum_probs=251.8
Q ss_pred CCCCceeeCCCCCCCCch--hHHHHHHHHHHhhcceEEEEecCCCHHHHHHHHHHHHHH-hcCCHHHHhhhccCCCCccc
Q 018510 44 ISKFPVIDMQSLLSEESV--DSELANLDFACREWGFFQLVNHGVSLALVDKVKKEIQEF-FNLSMEEKKKYWQYPGEVEG 120 (355)
Q Consensus 44 ~~~iPvIDls~l~~~d~~--~~~~~~l~~A~~~~Gff~l~nhgi~~~l~~~~~~~~~~f-F~lP~e~K~~~~~~~~~~~G 120 (355)
..+||||||+.+.+++.. .+.+++|.+||++||||||+|||| +++++++++++| |+||.|+|+++.. +|
T Consensus 6 ~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi---l~~~~~~~~~~F~F~lP~eeK~~~~~-----~G 77 (331)
T 1odm_A 6 KANVPKIDVSPLFGDDQAAKMRVAQQIDAASRDTGFFYAVNHGI---NVQRLSQKTKEFHMSITPEEKWDLAI-----RA 77 (331)
T ss_dssp BCCCCEEECGGGGSSCHHHHHHHHHHHHHHHHTTSEEEEESCCC---CHHHHHHHHHHHHHHCCHHHHHHHBC-----TT
T ss_pred CCCCCEEEchHhcCCChHHHHHHHHHHHHHHHhCCEEEEEccce---eHHHHHHHHHhccCCCCHHHHHhhhh-----cC
Confidence 367999999998766542 235699999999999999999999 999999999999 9999999999975 57
Q ss_pred cccccccc--c------cccCCcccccccccCccc----------CCCCCCCCCC--CccHHHHHHHHHHHHHHHHHHHH
Q 018510 121 FGQAFVVS--E------EQRLDWGDLFFMTTLPVH----------LRKPHLFPKL--PPSLRDTLEVYSTEVNALAMNLI 180 (355)
Q Consensus 121 y~~~~~~~--~------~~~~d~~e~~~~~~~p~~----------~~~~n~wP~~--~~~fr~~~~~y~~~~~~la~~ll 180 (355)
|.....+. . .+..||+|.|++...... ...+|.||+. +++||+.+++|+++|.+++..|+
T Consensus 78 y~~~~~e~~~~~~~~~~~~~~d~kE~~~~~~~~~~~~p~~~~~~~~~~~n~wP~~~~~p~fr~~~~~y~~~~~~l~~~ll 157 (331)
T 1odm_A 78 YNKEHQDQVRAGYYLSIPGKKAVESFCYLNPNFTPDHPRIQAKTPTHEVNVWPDETKHPGFQDFAEQYYWDVFGLSSALL 157 (331)
T ss_dssp TCTTCTTCSSSEEECCBTTTBCCEEEEECCTTCCTTSHHHHTTCTTCCCCCCCCTTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcCCccccccccccccCCCCChhheEecccCCccccccccccccccCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHH
Confidence 75433221 1 257799999988753210 2458999987 89999999999999999999999
Q ss_pred HHHHHHcCCChhHHHHhhhcccceee--eeccC------C---CCCCCC-cccccCccCCCceEEEEeCCCCCceeEee-
Q 018510 181 SRMAKVLHIKDEEVREFFENGLQSMR--MNYYP------P---CPQPGK-VMGLTPHSDSVALTILLQINEAEGLQIKK- 247 (355)
Q Consensus 181 ~~l~~~Lgl~~~~~~~~~~~~~~~lr--l~~Yp------~---~~~~~~-~~~~~~HtD~~~lTll~q~~~~~GLqv~~- 247 (355)
++|+++||+++++|.+.+..+.+.|| ++||| | |++++. .+|+++|||+|+||||+| ++++||||++
T Consensus 158 ~~la~~Lgl~~~~f~~~~~~~~~~lr~~l~~YP~~~~~~p~~~~~~~~~~~~g~~~HtD~g~lTlL~q-d~v~GLQV~~~ 236 (331)
T 1odm_A 158 KGYALALGKEENFFARHFKPDDTLASVVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVSLITVLYQ-SNVQNLQVETA 236 (331)
T ss_dssp HHHHHHTTSCTTTTGGGCCTTTCCCEEEEEEECCCSSCCGGGCEECTTSCEEEEEEECCSSSEEEEEE-CSSCCEEEEET
T ss_pred HHHHHHhCCCHHHHHHHhcCcHHHHHHHHhhCCCcccccccccCCCccccccccccccCCCeEEEEee-CCCCCEEEEcC
Confidence 99999999999999999988889999 99999 7 777665 899999999999999999 5799999994
Q ss_pred CCeeEeccCCCCeEEEEecchhhhhhCCcccccccccccCCCCCeeEEEEeecCCCCcEEecCCCccCCCCCCCCCcccH
Q 018510 248 DGKWFPVRPLPNAFIVNIGDMLEVITNGVYPSIEHRAVVNSEQERLSIATFHLVKYDGEVGPAPSLITEKTPALFRRVTT 327 (355)
Q Consensus 248 ~g~W~~V~p~~g~~vVnvGd~L~~~TnG~~~s~~HRVv~~~~~~R~Si~~F~~p~~d~~i~pl~~~~~~~~~~~y~~~~~ 327 (355)
+| |++|+|+||++|||+||+||+||||+||||+|||+. +..+|||++||++|+.|++|.|+++++++++ ++|+++++
T Consensus 237 ~g-Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~-~~~~R~Sia~F~~P~~d~~i~pl~~~~~~~~-~~y~~~t~ 313 (331)
T 1odm_A 237 AG-YQDIEADDTGYLINCGSYMAHLTNNYYKAPIHRVKW-VNAERQSLPFFVNLGYDSVIDPFDPREPNGK-SDREPLSY 313 (331)
T ss_dssp TE-EEECCCCTTSEEEEECHHHHHHTTTSSCCCCEEEEC-CCSCEEEEEEEECCCTTCBCCCCCTTSTTCC-CSSCCCBH
T ss_pred CC-eEECCCCCCeEEEEccHHHHHHhCCEeeCCCceeCC-CCCCEEEEEEEEcCCCCCEEeCCCccccccc-cCCCCccH
Confidence 78 999999999999999999999999999999999985 4679999999999999999999999998877 89999999
Q ss_pred HHHHHHHHhhcc
Q 018510 328 EEFLKAVFSREL 339 (355)
Q Consensus 328 ~e~~~~~~~~~~ 339 (355)
+||++.++++.+
T Consensus 314 ~e~l~~~~~~~~ 325 (331)
T 1odm_A 314 GDYLQNGLVSLI 325 (331)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999998764
No 6
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=100.00 E-value=1e-65 Score=477.11 Aligned_cols=260 Identities=27% Similarity=0.394 Sum_probs=224.4
Q ss_pred CCCceeeCCCCCCCCchhHHHHHHHHHHhhcceEEEEecCCCHHHHHHHHHHHHHHhcCCHHHHhhhccCCCCccccccc
Q 018510 45 SKFPVIDMQSLLSEESVDSELANLDFACREWGFFQLVNHGVSLALVDKVKKEIQEFFNLSMEEKKKYWQYPGEVEGFGQA 124 (355)
Q Consensus 45 ~~iPvIDls~l~~~d~~~~~~~~l~~A~~~~Gff~l~nhgi~~~l~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~Gy~~~ 124 (355)
++||||||+.. + ++++|.+||++||||||+||||+.++++++++++++||++ |+|+++...+...+||...
T Consensus 2 ~~IPvIDls~~------~-~~~~l~~A~~~~GFF~v~nHGi~~~li~~~~~~~~~FF~l--e~K~k~~~~~~~~~GY~~~ 72 (280)
T 3on7_A 2 MKLETIDYRAA------D-SAKRFVESLRETGFGVLSNHPIDKELVERIYTEWQAFFNS--EAKNEFMFNRETHDGFFPA 72 (280)
T ss_dssp --CCEEETTST------T-HHHHHHHHHHHHSEEEEESCSSCHHHHHHHHHHHHHHHTS--GGGGGGBCCTTTCCEEECC
T ss_pred CCCCEEECCCh------h-HHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHhhh--HHHHHhccCCCCCCccccC
Confidence 57999999963 1 5799999999999999999999999999999999999998 8999997766668999765
Q ss_pred c-ccc--ccccCCcccccccccCcccCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCh--hH---HHH
Q 018510 125 F-VVS--EEQRLDWGDLFFMTTLPVHLRKPHLFPKLPPSLRDTLEVYSTEVNALAMNLISRMAKVLHIKD--EE---VRE 196 (355)
Q Consensus 125 ~-~~~--~~~~~d~~e~~~~~~~p~~~~~~n~wP~~~~~fr~~~~~y~~~~~~la~~ll~~l~~~Lgl~~--~~---~~~ 196 (355)
. .+. .....||+|.+.+. .||+.++.||+.+++|+++|.+++.+||++|+++||++. ++ |.+
T Consensus 73 ~~~e~~~~~~~~D~kE~~~~~----------p~~~~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~ 142 (280)
T 3on7_A 73 SISETAKGHTVKDIKEYYHVY----------PWGRIPDSLRANILAYYEKANTLASELLEWIETYSPDEIKAKFSIPLPE 142 (280)
T ss_dssp C--------CCCCSCEEEEEC----------TTSCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHTTCSSCHHH
T ss_pred ccccccCCCCcccHHHHHhcC----------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcchhhhhHHHHH
Confidence 3 221 23467999987652 378888999999999999999999999999999999863 22 566
Q ss_pred hhhccc-ceeeeeccCCCCCCC--CcccccCccCCCceEEEEeCCCCCceeEee-CCeeEeccCCCCeEEEEecchhhhh
Q 018510 197 FFENGL-QSMRMNYYPPCPQPG--KVMGLTPHSDSVALTILLQINEAEGLQIKK-DGKWFPVRPLPNAFIVNIGDMLEVI 272 (355)
Q Consensus 197 ~~~~~~-~~lrl~~Yp~~~~~~--~~~~~~~HtD~~~lTll~q~~~~~GLqv~~-~g~W~~V~p~~g~~vVnvGd~L~~~ 272 (355)
.+..+. +.||++|||||+.++ ..+|+++|||+|+||||+| ++++||||++ +|+|++|+|+||++|||+||+||+|
T Consensus 143 ~~~~~~~~~lr~~~YP~~~~~~~~~~~g~~~HtD~g~lTlL~q-d~~~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~ 221 (280)
T 3on7_A 143 MIANSHKTLLRILHYPPMTGDEEMGAIRAAAHEDINLITVLPT-ANEPGLQVKAKDGSWLDVPSDFGNIIINIGDMLQEA 221 (280)
T ss_dssp HHTTCSSCEEEEEEECCCCTTCCCCSEEEEEECCCSSEEEEEC-CSCCCEEEECTTSCEEECCCCTTCEEEEECHHHHHH
T ss_pred HhcCCccceEEEEECCCCCCccccCcccccCCCCCCeEEEEEe-cCCCCeEEEcCCCCEEECcCCCCEEEEEcChHHHHH
Confidence 666654 899999999998654 5789999999999999999 5799999995 8999999999999999999999999
Q ss_pred hCCcccccccccccCC----CCCeeEEEEeecCCCCcEEecCCCccCCCCCCCCCcccHHHHHHHHHhhc
Q 018510 273 TNGVYPSIEHRAVVNS----EQERLSIATFHLVKYDGEVGPAPSLITEKTPALFRRVTTEEFLKAVFSRE 338 (355)
Q Consensus 273 TnG~~~s~~HRVv~~~----~~~R~Si~~F~~p~~d~~i~pl~~~~~~~~~~~y~~~~~~e~~~~~~~~~ 338 (355)
|||+||||+|||+.++ ..+|||++||++|+.|++|.| ++|++||+++|++..
T Consensus 222 Tng~~kS~~HRVv~~~~~~~~~~R~Si~~F~~P~~d~~i~p--------------~ita~~~l~~rl~~~ 277 (280)
T 3on7_A 222 SDGYFPSTSHRVINPEGTDKTKSRISLPLFLHPHPSVVLSE--------------RYTADSYLMERLREL 277 (280)
T ss_dssp TTTSSCCCCEEEECCTTCCTTSCEEECCEEECCCTTCBCSS--------------SCBHHHHHHHHHHHT
T ss_pred hCCcccCCCceEeCCCCCCCCCCeEEEEEEEcCCCCCEECC--------------CccHHHHHHHHHHHh
Confidence 9999999999999874 458999999999999999873 699999999999864
No 7
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=96.11 E-value=0.019 Score=51.05 Aligned_cols=105 Identities=15% Similarity=0.081 Sum_probs=64.6
Q ss_pred HHHHHHHHHcCCChhHHHHhhhcccceeeeeccCCCCCCCCcccccCccCCC-----------ceEEEEeCCC----C-C
Q 018510 178 NLISRMAKVLHIKDEEVREFFENGLQSMRMNYYPPCPQPGKVMGLTPHSDSV-----------ALTILLQINE----A-E 241 (355)
Q Consensus 178 ~ll~~l~~~Lgl~~~~~~~~~~~~~~~lrl~~Yp~~~~~~~~~~~~~HtD~~-----------~lTll~q~~~----~-~ 241 (355)
.|.+.|...|+..+.+..-.+.....-+++++|.+. -...+|.|.. .+|+++.-++ . |
T Consensus 74 ~l~~~i~~~l~~~~~f~~~~L~~~~e~~~~~rY~~G------~~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GG 147 (243)
T 3dkq_A 74 ALGQQIMDRLLAHPQFVSAALPLQFYPPLFNRYQGG------ETFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGG 147 (243)
T ss_dssp HHHHHHHHHHHTCHHHHHHHCEEEEEEEEEEEECTT------CEEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEEC
T ss_pred HHHHHHHHHHccCcchhhcccccccccceEEEECCC------CeeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCc
Confidence 334444444555433322222233446889999772 1246677763 5666665333 2 3
Q ss_pred ceeEeeCCeeEeccCCCCeEEEEecchhhhhhCCcccccccccccCCCCCeeEEEEeec
Q 018510 242 GLQIKKDGKWFPVRPLPNAFIVNIGDMLEVITNGVYPSIEHRAVVNSEQERLSIATFHL 300 (355)
Q Consensus 242 GLqv~~~g~W~~V~p~~g~~vVnvGd~L~~~TnG~~~s~~HRVv~~~~~~R~Si~~F~~ 300 (355)
.|.+.+...=..|+|..|++|+.-. .++|+|..-....|++++.+++
T Consensus 148 etvf~~~~~~~~V~P~~G~~v~F~s------------~~lH~v~pV~~G~R~~~~~Wi~ 194 (243)
T 3dkq_A 148 ELVIQDTYGQQSIKLSAGSLVLYPS------------SSLHQVTPVLSGERTAAFMWLQ 194 (243)
T ss_dssp CEEEEETTEEEEECCCTTCEEEEET------------TSEEEECCEEEECEEEEEEEEE
T ss_pred eEEEeeCCCcEEEecCCCEEEEECC------------CCeEcCccccccCEEEEEEehh
Confidence 3666654444789999999999753 3689997544458999999986
No 8
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=93.43 E-value=1 Score=39.07 Aligned_cols=43 Identities=16% Similarity=0.148 Sum_probs=33.2
Q ss_pred CeeEeccCCCCeEEEEecchhhhhhCCcccccccccccCC-CCCeeEEEEeecCCC
Q 018510 249 GKWFPVRPLPNAFIVNIGDMLEVITNGVYPSIEHRAVVNS-EQERLSIATFHLVKY 303 (355)
Q Consensus 249 g~W~~V~p~~g~~vVnvGd~L~~~TnG~~~s~~HRVv~~~-~~~R~Si~~F~~p~~ 303 (355)
..+..|.|.+|.+|+.-+. -.|+|..+. +++|+||+|-+.+..
T Consensus 166 ~~~~~i~P~~G~lvlFpS~------------l~H~V~p~~~~~~RiSIsFN~~~~~ 209 (216)
T 2rg4_A 166 RTFRSVAPKVGDVLLWESW------------LRHEVPMNMAEEDRISVSFNYAWGE 209 (216)
T ss_dssp CSEEEECCCTTEEEEEETT------------SCEEECCCCSSSCEEEEEEEEEC--
T ss_pred CCeeEecCCCCeEEEECCC------------CEEeccCCCCCCCEEEEEEEeecCC
Confidence 3567899999999988764 379998654 468999999998764
No 9
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=91.50 E-value=0.55 Score=41.66 Aligned_cols=183 Identities=15% Similarity=0.194 Sum_probs=98.1
Q ss_pred HHHHHHHHhhcceEEEEecCCCHHHHHHHHHHHHHHhcCCHHHHhhhccCCCCcccccccccccccccCCcccccccccC
Q 018510 65 LANLDFACREWGFFQLVNHGVSLALVDKVKKEIQEFFNLSMEEKKKYWQYPGEVEGFGQAFVVSEEQRLDWGDLFFMTTL 144 (355)
Q Consensus 65 ~~~l~~A~~~~Gff~l~nhgi~~~l~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~Gy~~~~~~~~~~~~d~~e~~~~~~~ 144 (355)
...+..++.+.|++++.|- ++++.++.+.+.++.+-+. -.+. +. ..|-... ....+.+.
T Consensus 16 ~~~i~~~L~~~g~~Vid~f-Ls~ee~~~L~~~~~~~~~~-----g~~~--~a-~i~~~~~-----~~~~~iR~------- 74 (247)
T 2hbt_A 16 LEYIVPCMNKHGICVVDDF-LGKETGQQIGDEVRALHDT-----GKFT--DG-QLVSQKS-----DSSKDIRG------- 74 (247)
T ss_dssp HHTHHHHHHHTSEEEESSS-SCHHHHHHHHHHHHHHHHT-----TCSC--SC-CEEECCS-----SSTTCEEC-------
T ss_pred HHHHHHHhccCCEEEECCC-CCHHHHHHHHHHHHhhhhc-----CCcc--cc-ccccccc-----cccccccc-------
Confidence 3678899999999887766 8999999999888774210 0011 10 0110000 00000000
Q ss_pred cccCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHhhhcccceeeeeccCCCCCCCCcccccC
Q 018510 145 PVHLRKPHLFPKLPPSLRDTLEVYSTEVNALAMNLISRMAKVLHIKDEEVREFFENGLQSMRMNYYPPCPQPGKVMGLTP 224 (355)
Q Consensus 145 p~~~~~~n~wP~~~~~fr~~~~~y~~~~~~la~~ll~~l~~~Lgl~~~~~~~~~~~~~~~lrl~~Yp~~~~~~~~~~~~~ 224 (355)
....|-+......+.+..|.+.|.++.. .+...||+.. . ....-+.+.+|++. .-...+
T Consensus 75 -----d~i~wl~~~~~~~~~~~~l~~~i~~l~~----~ln~~lGl~~------i-~~~~e~~~~~Y~~~-----G~~y~~ 133 (247)
T 2hbt_A 75 -----DKITWIEGKEPGCETIGLLMSSMDDLIR----HCNGKLGSYK------I-NGRTKAMVACYPGN-----GTGYVR 133 (247)
T ss_dssp -----CEEEEECSCSTTCHHHHHHHHHHHHHHH----HTTTTSTTCC------E-EEECCEEEEEECSS-----SCCEEE
T ss_pred -----cceeeecccccchhHHHHHHHHHHHHHH----HHhhhcCccc------c-cccceEEEEEecCC-----CCcccc
Confidence 0001111000011223345555544433 2222234320 0 01233678888751 112456
Q ss_pred ccCCC-----ceEEEEeCCC------CCc-eeEeeCC--eeEeccCCCCeEEEEecchhhhhhCCcccccccccccCCCC
Q 018510 225 HSDSV-----ALTILLQINE------AEG-LQIKKDG--KWFPVRPLPNAFIVNIGDMLEVITNGVYPSIEHRAVVNSEQ 290 (355)
Q Consensus 225 HtD~~-----~lTll~q~~~------~~G-Lqv~~~g--~W~~V~p~~g~~vVnvGd~L~~~TnG~~~s~~HRVv~~~~~ 290 (355)
|.|.. .+|+++.-++ .+| |.+..++ ....|.|..|.+|++-.+. -.+|.|.. ...
T Consensus 134 H~D~~~~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~~~~~~~v~P~~grlv~F~s~~----------~~~H~V~p-~~~ 202 (247)
T 2hbt_A 134 HVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDR----------RNPHEVQP-AYA 202 (247)
T ss_dssp ECSSCSCCSEEEEEEEECBTTCCHHHHBCCEEECCTTCSSCEEECCBTTEEEEEECST----------TCCEEECC-BSS
T ss_pred cccCCCCCCceEEEEEEeCCCCCCCCCceeEEEecCCCCceEEEEcCCCEEEEEecCC----------Cceeeecc-CCC
Confidence 77762 6888876332 144 6777644 6789999999999987531 15899875 456
Q ss_pred CeeEEEEeec
Q 018510 291 ERLSIATFHL 300 (355)
Q Consensus 291 ~R~Si~~F~~ 300 (355)
.|+||+.++.
T Consensus 203 ~R~sit~W~~ 212 (247)
T 2hbt_A 203 TRYAITVWYF 212 (247)
T ss_dssp CEEEEEEEEE
T ss_pred EEEEEEEEEc
Confidence 8999998764
No 10
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=86.49 E-value=1.2 Score=38.64 Aligned_cols=88 Identities=16% Similarity=0.285 Sum_probs=54.4
Q ss_pred eeeeeccCCCCCCCCcccccCccCC--------------CceEEEEeCCC--CCc-eeEeeCC-------------eeEe
Q 018510 204 SMRMNYYPPCPQPGKVMGLTPHSDS--------------VALTILLQINE--AEG-LQIKKDG-------------KWFP 253 (355)
Q Consensus 204 ~lrl~~Yp~~~~~~~~~~~~~HtD~--------------~~lTll~q~~~--~~G-Lqv~~~g-------------~W~~ 253 (355)
.+++++|.+.. ...+|.|+ ..+|+++.-++ .+| +.....+ .-+.
T Consensus 99 ~~qv~rY~~G~------~y~~H~D~~~~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~~~~~~~~~~~~c~~~~~~ 172 (224)
T 2jig_A 99 GLQVLHYHDGQ------KYEPHYDYFHDPVNAGPEHGGQRVVTMLMYLTTVEEGGETVLPNAEQKVTGDGWSECAKRGLA 172 (224)
T ss_dssp CCEEEEEETTC------CEEEECCSSCCTTSSSCCCCSCEEEEEEEECSCCSEECCEEETTSSSCCCSTTSCTTGGGSEE
T ss_pred ceEEEecCCCc------cccCcccCCCCccccccccCCCeEEEEEEEecCCCCCCceeCCCcccccccccccccccCceE
Confidence 47888887621 13456664 25788876333 344 3332211 2478
Q ss_pred ccCCCCeEEEEecchhhhhhCCcc-cccccccccCCCCCeeEEEEeecC
Q 018510 254 VRPLPNAFIVNIGDMLEVITNGVY-PSIEHRAVVNSEQERLSIATFHLV 301 (355)
Q Consensus 254 V~p~~g~~vVnvGd~L~~~TnG~~-~s~~HRVv~~~~~~R~Si~~F~~p 301 (355)
|.|..|.+|+.-- ...+|.. ..++|+|..-....||++..+++-
T Consensus 173 V~P~~G~al~f~~----~~~~g~~d~~~lH~~~PV~~G~K~~~~~Wi~~ 217 (224)
T 2jig_A 173 VKPIKGDALMFYS----LKPDGSNDPASLHGSCPTLKGDKWSATKWIHV 217 (224)
T ss_dssp ECCCTTCEEEEES----BCTTSCBCGGGCEEECCEEESEEEEEEEEEES
T ss_pred EecccCcEEEEEe----eCCCCCCCCCCcccCCccccceEEEEEEeEEc
Confidence 9999999988753 1233433 678999875444579999998864
No 11
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=83.46 E-value=4.3 Score=35.07 Aligned_cols=104 Identities=11% Similarity=0.096 Sum_probs=61.5
Q ss_pred HHHHHHHHHcCCChhHHHHhhhcccceeeeeccCCCCCCCCcccccCccCCC-----------ceEEEEeCCC--CCcee
Q 018510 178 NLISRMAKVLHIKDEEVREFFENGLQSMRMNYYPPCPQPGKVMGLTPHSDSV-----------ALTILLQINE--AEGLQ 244 (355)
Q Consensus 178 ~ll~~l~~~Lgl~~~~~~~~~~~~~~~lrl~~Yp~~~~~~~~~~~~~HtD~~-----------~lTll~q~~~--~~GLq 244 (355)
.|.+.|+..+|++.+ ..-.+++++|.+.. ...+|.|+. .+|+++.-++ .+|=-
T Consensus 94 ~i~~Ri~~~~gl~~~--------~~E~lqv~~Y~~G~------~y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT 159 (216)
T 3itq_A 94 KIEKRISSIMNVPAS--------HGEGLHILNYEVDQ------QYKAHYDYFAEHSRSAANNRISTLVMYLNDVEEGGET 159 (216)
T ss_dssp HHHHHHHHHHTSCGG--------GBCCCEEEEECBTC------CEEEECSSCCTTSGGGGGCEEEEEEEECSCCSEECCE
T ss_pred HHHHHHHHhcCceec--------cccceeEEEeCCCC------ccccccCCCcCCCcccCCceEEEEEEecccCCcCcee
Confidence 444445555677531 12358888887622 135677653 4788876433 23422
Q ss_pred EeeCCeeEeccCCCCeEEEEecchhhhhhCCc-ccccccccccCCCCCeeEEEEeec
Q 018510 245 IKKDGKWFPVRPLPNAFIVNIGDMLEVITNGV-YPSIEHRAVVNSEQERLSIATFHL 300 (355)
Q Consensus 245 v~~~g~W~~V~p~~g~~vVnvGd~L~~~TnG~-~~s~~HRVv~~~~~~R~Si~~F~~ 300 (355)
+..+ .=+.|.|..|.+|+.-.- ..+|. -..++|+|..-....|+++..+++
T Consensus 160 ~Fp~-~~~~V~P~~G~al~f~~~----~~~g~~d~~~lH~~~PV~~G~K~v~~~W~~ 211 (216)
T 3itq_A 160 FFPK-LNLSVHPRKGMAVYFEYF----YQDQSLNELTLHGGAPVTKGEKWIATQWVR 211 (216)
T ss_dssp EETT-TTEEECCCTTCEEEEECC----CSSHHHHHTTCEEECCEEESCEEEEEEEEE
T ss_pred EecC-CCCEEecCCCeEEEEecc----CCCCCCCCccccccceeccccEEEEEeeEe
Confidence 2222 127899999999886541 12332 246899987544457999998875
No 12
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=82.81 E-value=3.2 Score=35.46 Aligned_cols=81 Identities=9% Similarity=0.041 Sum_probs=51.8
Q ss_pred ceeeeeccCCCCCCCCcccccCccCCC--------ceEEEEeCCCCCceeEee----------CCeeEeccCCCCeEEEE
Q 018510 203 QSMRMNYYPPCPQPGKVMGLTPHSDSV--------ALTILLQINEAEGLQIKK----------DGKWFPVRPLPNAFIVN 264 (355)
Q Consensus 203 ~~lrl~~Yp~~~~~~~~~~~~~HtD~~--------~lTll~q~~~~~GLqv~~----------~g~W~~V~p~~g~~vVn 264 (355)
..+-+|+|.+ +.-++++|.|-. +.++-+. ...-+.+.. .+..+.+...+|+++|+
T Consensus 100 n~~LvN~Y~~-----G~d~i~~H~D~~~~~~~~~~IasvSLG--~~~~f~~~~~~~~~~~~~~~~~~~~~~L~~GsllvM 172 (204)
T 3s57_A 100 NFVLINRYKD-----GSDHICEHRDDERELAPGSPIASVSFG--ASRDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMM 172 (204)
T ss_dssp SEEEEEEESS-----TTCCEEEECCCCTTBCTTCCEEEEEEE--SCEEEEEEEGGGCSSSCSCCCCCEEEEECTTEEEEE
T ss_pred ceeEEEEECC-----CCCcccceecChhhccCCCcEEEEECC--CceEEEEEEcCCCccccccCCceEEEECCCCCEEEE
Confidence 4466899977 233678898862 2233332 122233432 12578899999999999
Q ss_pred ecchhhhhhCCcccccccccccCC--CCCeeEEEEe
Q 018510 265 IGDMLEVITNGVYPSIEHRAVVNS--EQERLSIATF 298 (355)
Q Consensus 265 vGd~L~~~TnG~~~s~~HRVv~~~--~~~R~Si~~F 298 (355)
-|++=..|. |.|-... ...|+|+.|-
T Consensus 173 ~g~~q~~w~--------H~Ip~~~~~~~~RislTFR 200 (204)
T 3s57_A 173 NHPTNTHWY--------HSLPVRKKVLAPRVNLTFR 200 (204)
T ss_dssp ETTHHHHEE--------EEECCCTTCCSCEEEEEEE
T ss_pred CchhhheeE--------eeccccCCCCCCEEEEEee
Confidence 998877776 5543322 3579999985
No 13
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=82.37 E-value=4.2 Score=35.61 Aligned_cols=85 Identities=13% Similarity=0.141 Sum_probs=54.4
Q ss_pred ceeeeeccCCCCCCCCcccccCccCCC--------ceEEEEeCCCCCceeEee-C----------CeeEeccCCCCeEEE
Q 018510 203 QSMRMNYYPPCPQPGKVMGLTPHSDSV--------ALTILLQINEAEGLQIKK-D----------GKWFPVRPLPNAFIV 263 (355)
Q Consensus 203 ~~lrl~~Yp~~~~~~~~~~~~~HtD~~--------~lTll~q~~~~~GLqv~~-~----------g~W~~V~p~~g~~vV 263 (355)
..+-+++|.+ +.-++++|.|-. +.||-+. ...=+.+.. . +..+.+...+|+++|
T Consensus 126 n~~LvN~Y~~-----G~d~i~~H~D~~~~~~~~~~IaslSLG--~~~~f~f~~~~~~~~~~~~~~~~~~~i~L~~gsllv 198 (238)
T 2iuw_A 126 NSLLCNLYRN-----EKDSVDWHSDDEPSLGRCPIIASLSFG--ATRTFEMRKKPPPEENGDYTYVERVKIPLDHGTLLI 198 (238)
T ss_dssp CEEEEEEECS-----TTCCEEEECCCCGGGCSSCCEEEEEEE--SCEEEEEEECCC--------CCCEEEEEECTTCEEE
T ss_pred CEEEEEEECC-----CCCceeCCcCChhhcCCCCcEEEEECC--CCEEEEEeccCCccccCcccCCceEEEEcCCCCEEE
Confidence 4567899977 234678888852 3333332 111233332 1 368899999999999
Q ss_pred EecchhhhhhCCcccccccccccCCCCCeeEEEEeec
Q 018510 264 NIGDMLEVITNGVYPSIEHRAVVNSEQERLSIATFHL 300 (355)
Q Consensus 264 nvGd~L~~~TnG~~~s~~HRVv~~~~~~R~Si~~F~~ 300 (355)
+-|++=..|.-|.-+.. .....|+|+.|=..
T Consensus 199 M~G~~r~~w~H~I~~~~------~~~~~RIsLTfR~v 229 (238)
T 2iuw_A 199 MEGATQADWQHRVPKEY------HSREPRVNLTFRTV 229 (238)
T ss_dssp EEETHHHHEEEEECCCS------SCCCCEEEEEEECC
T ss_pred EChhhhCccEecCCCcC------CCCCCEEEEEeeec
Confidence 99998777765443321 12457999999753
No 14
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=71.79 E-value=7.8 Score=33.25 Aligned_cols=80 Identities=15% Similarity=0.106 Sum_probs=51.2
Q ss_pred ceeeeeccCCCCCCCCcccccCccCC-----C--ceEEEEeCCCCCceeEee---CCeeEeccCCCCeEEEEecchhhhh
Q 018510 203 QSMRMNYYPPCPQPGKVMGLTPHSDS-----V--ALTILLQINEAEGLQIKK---DGKWFPVRPLPNAFIVNIGDMLEVI 272 (355)
Q Consensus 203 ~~lrl~~Yp~~~~~~~~~~~~~HtD~-----~--~lTll~q~~~~~GLqv~~---~g~W~~V~p~~g~~vVnvGd~L~~~ 272 (355)
..+-+++|.+ +. ++++|.|- + ++|+-+. ...-+.+.. .+....+...+|+++|.-|++- .|
T Consensus 105 n~~LvN~Y~~-----G~-~i~~H~D~~e~~~~~pI~svSLG--~~~~f~f~~~~~~~~~~~i~L~~GsllvM~G~~r-~~ 175 (211)
T 3i3q_A 105 DACLINRYAP-----GA-KLSLHQDKDEPDLRAPIVSVSLG--LPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESR-LF 175 (211)
T ss_dssp CEEEEEEECT-----TC-CEEEECCCCCSCTTSCEEEEEEE--SCEEEEECCSSTTSCCEEEEECTTCEEEECGGGT-TC
T ss_pred CEEEEEEEcC-----CC-CcccccCCCccccCCCEEEEECC--CCeEEEEecccCCCceEEEECCCCCEEEECchHH-ce
Confidence 4577899977 23 78899993 2 2344343 122244432 3568899999999999988762 23
Q ss_pred hCCcccccccccccCC-------CCCeeEEEEee
Q 018510 273 TNGVYPSIEHRAVVNS-------EQERLSIATFH 299 (355)
Q Consensus 273 TnG~~~s~~HRVv~~~-------~~~R~Si~~F~ 299 (355)
.|.|.... +..|+|+.|-.
T Consensus 176 --------~H~I~~~~~~~~p~~~~~RIsLTFR~ 201 (211)
T 3i3q_A 176 --------YHGIQPLKAGFHPLTIDCRYNLTFRQ 201 (211)
T ss_dssp --------CEEECCCCCCCBTTTBTCEEEEEEEC
T ss_pred --------EeccCcccCCcCCCCCCCEEEEEeee
Confidence 36665332 23599999974
No 15
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=68.79 E-value=5.1 Score=37.19 Aligned_cols=95 Identities=20% Similarity=0.235 Sum_probs=61.3
Q ss_pred cceeeeeccCCCCCCCCcccccCccCCC------ceEEEEeCCCCCceeEee-CCeeEeccCCCCeEEEEecchhhhhhC
Q 018510 202 LQSMRMNYYPPCPQPGKVMGLTPHSDSV------ALTILLQINEAEGLQIKK-DGKWFPVRPLPNAFIVNIGDMLEVITN 274 (355)
Q Consensus 202 ~~~lrl~~Yp~~~~~~~~~~~~~HtD~~------~lTll~q~~~~~GLqv~~-~g~W~~V~p~~g~~vVnvGd~L~~~Tn 274 (355)
...+-+++|.+ + -++++|.|.. ..|+-+. ...-+.+.. +|.++.+...+|+++|+-|++=..|.-
T Consensus 197 ~n~~lvN~Y~~-----G-~~I~~H~D~~~~~~~~I~slSLG--~~~~f~f~~~~~~~~~l~L~~gsLlvM~G~~r~~w~H 268 (345)
T 3tht_A 197 PDQMTINQYEP-----G-QGIPAHIDTHSAFEDEIVSLSLG--SEIVMDFKHPDGIAVPVMLPRRSLLVMTGESRYLWTH 268 (345)
T ss_dssp CSEEEEEEECT-----T-CCEEEECCCTTTBCSCEEEEEES--SCEEEEEECTTSCEEEEEECTTEEEEECTHHHHTSEE
T ss_pred CCEEEEEEecC-----C-CCEeeccCCchhcCCeEEEEECC--CceeEEEccCCCceEEEEcCCCcEEEEChHHhhceEc
Confidence 34577888976 2 2788999984 2333332 122233333 567899999999999999999999976
Q ss_pred Cccccccccccc------------------CCCCCeeEEEEeecCCCC
Q 018510 275 GVYPSIEHRAVV------------------NSEQERLSIATFHLVKYD 304 (355)
Q Consensus 275 G~~~s~~HRVv~------------------~~~~~R~Si~~F~~p~~d 304 (355)
|.-+-...-+-. .+...|+|+.|=..+...
T Consensus 269 ~I~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~r~~RiSlT~R~v~~~~ 316 (345)
T 3tht_A 269 GITCRKFDTVQASESLKSGIITSDVGDLTLSKRGLRTSFTFRKVRQTP 316 (345)
T ss_dssp EECCCSEEEEESGGGSSCEECCSSSSCEEEEECCCEEEEEEECBCSSC
T ss_pred cCCcccCCccCcccccccccccccCCCceeccCCCEEEEEEEecCCCC
Confidence 655433322210 012469999999766653
No 16
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=62.28 E-value=5.5 Score=38.25 Aligned_cols=54 Identities=9% Similarity=0.159 Sum_probs=40.9
Q ss_pred CCCCceeeCCCCCCCCchhHHHHHHHHHHhhcceEEEEecCCCHHHHHHHHHHHHHHhc
Q 018510 44 ISKFPVIDMQSLLSEESVDSELANLDFACREWGFFQLVNHGVSLALVDKVKKEIQEFFN 102 (355)
Q Consensus 44 ~~~iPvIDls~l~~~d~~~~~~~~l~~A~~~~Gff~l~nhgi~~~l~~~~~~~~~~fF~ 102 (355)
+..||.||++++.++... ++..+.+++.|++.|+|. ||.+...+..+....|.+
T Consensus 98 ~~~iP~i~f~di~~~~~s----~~~~~~ir~rG~vVIRgv-vp~e~A~~~~~~~~~yl~ 151 (461)
T 2dbn_A 98 DAVWPVLSYADIKAGHVT----AEQREQIKRRGCAVIKGH-FPREQALGWDQSMLDYLD 151 (461)
T ss_dssp CCSSCEEEHHHHHHTCCC----HHHHHHHHHHSEEEEETS-SCHHHHHHHHHHHHHHHH
T ss_pred CCCcceecHHHhcCCCCC----HHHHHHHHhccEEEECCC-CCHHHHHHHHHHHHHHHH
Confidence 357999999988654321 455577899999999887 898888777777777764
No 17
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=51.90 E-value=5.9 Score=37.33 Aligned_cols=52 Identities=17% Similarity=0.164 Sum_probs=38.9
Q ss_pred CCceeeCCCCCCCCchhHHHHHHHHHHhhcceEEEEecCCCHHHHHHHHHHHHHHhcC
Q 018510 46 KFPVIDMQSLLSEESVDSELANLDFACREWGFFQLVNHGVSLALVDKVKKEIQEFFNL 103 (355)
Q Consensus 46 ~iPvIDls~l~~~d~~~~~~~~l~~A~~~~Gff~l~nhgi~~~l~~~~~~~~~~fF~l 103 (355)
++|.||++++.+. ++.++++.+++.++|++.+.+-.++.+. ..+.++.|=.+
T Consensus 122 ~~~~~~~~~~l~~---d~~~~~~~~~l~~~Gvv~frg~~~~~~~---~~~~a~~~G~l 173 (388)
T 3o2g_A 122 QLPTLDFEDVLRY---DEHAYKWLSTLKKVGIVRLTGASDKPGE---VSKLGKRMGFL 173 (388)
T ss_dssp CCCEEEHHHHHHC---HHHHHHHHHHHHHHSEEEEECCCSSTTH---HHHHHHHHSCC
T ss_pred CCCccCHHHHhcC---HHHHHHHHHHHHhcCEEEEeCCCCCHHH---HHHHHHHhCCC
Confidence 5899999987642 2367999999999999999999887543 33456666443
No 18
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=41.71 E-value=29 Score=26.77 Aligned_cols=36 Identities=22% Similarity=0.165 Sum_probs=28.0
Q ss_pred eeeCCCCCCCCchhHHHHHHHHHHhhcceEEEEecCCCHH
Q 018510 49 VIDMQSLLSEESVDSELANLDFACREWGFFQLVNHGVSLA 88 (355)
Q Consensus 49 vIDls~l~~~d~~~~~~~~l~~A~~~~Gff~l~nhgi~~~ 88 (355)
|||++.+.. .. ....|.+.|+++|+..+--.|.+.+
T Consensus 51 VlDl~~l~~-~~---dl~~L~~~l~~~gl~~vGV~g~~~~ 86 (120)
T 3ghf_A 51 VINVSGLES-PV---NWPELHKIVTSTGLRIIGVSGCKDA 86 (120)
T ss_dssp EEEEEECCS-SC---CHHHHHHHHHTTTCEEEEEESCCCH
T ss_pred EEEccccCC-hH---HHHHHHHHHHHcCCEEEEEeCCCcH
Confidence 669988852 22 4688999999999999988886654
No 19
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=37.65 E-value=29 Score=30.63 Aligned_cols=44 Identities=16% Similarity=0.167 Sum_probs=33.9
Q ss_pred CCCCCceeeCCCCCCCCchhHHHHHHHHHHhhcceEEEEecCCCHHHH
Q 018510 43 LISKFPVIDMQSLLSEESVDSELANLDFACREWGFFQLVNHGVSLALV 90 (355)
Q Consensus 43 ~~~~iPvIDls~l~~~d~~~~~~~~l~~A~~~~Gff~l~nhgi~~~l~ 90 (355)
..++|+-||+++..+ ++.+++|.+++.++|++.+.+-.++.+..
T Consensus 14 ~Gaei~gvdl~~~l~----~~~~~~l~~~l~~~Gvv~frg~~~~~~~~ 57 (283)
T 1otj_A 14 IGAQISGADLTRPLS----DNQFEQLYHAVLRHQVVFLRDQAITPQQQ 57 (283)
T ss_dssp SCEEEESCCSSSCCC----HHHHHHHHHHHHHHSEEEECSCCCCHHHH
T ss_pred ceEEEECCCcCccCC----HHHHHHHHHHHHHCCEEEECCCCCCHHHH
Confidence 346788889988542 23679999999999999999988765433
No 20
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=36.43 E-value=75 Score=28.91 Aligned_cols=47 Identities=21% Similarity=0.114 Sum_probs=34.1
Q ss_pred CCCCCchhHHHHHHHHHHhhcceEEEEecCCC----HHHHHHHHHHHHHHhc
Q 018510 55 LLSEESVDSELANLDFACREWGFFQLVNHGVS----LALVDKVKKEIQEFFN 102 (355)
Q Consensus 55 l~~~d~~~~~~~~l~~A~~~~Gff~l~nhgi~----~~l~~~~~~~~~~fF~ 102 (355)
|..++. ++..+++.+.++.-||+.=.+|||+ .+.++.++++++.|++
T Consensus 298 l~~g~~-e~i~~~v~~~l~~~g~I~~~Ghgi~p~tp~env~a~v~av~ey~A 348 (348)
T 4ay7_A 298 LLPGPV-DKIKAEAKEALEGGIDVLAPGCGIAPMTPLENVKALVAARDEFYA 348 (348)
T ss_dssp CTTCCH-HHHHHHHHHHHHTTCSEEEESSSCCTTCCHHHHHHHHHHHHHHTC
T ss_pred hcCCCH-HHHHHHHHHHHhCCCCEEeCCCccCCCCCHHHHHHHHHHHHHhcC
Confidence 344444 3233677777888888766789864 5889999999999985
No 21
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A
Probab=34.88 E-value=1.4e+02 Score=29.85 Aligned_cols=102 Identities=18% Similarity=0.158 Sum_probs=58.0
Q ss_pred HHHHHHHHHcCCChhHHHHhhhcccceeeeeccCCCCCCCCcccccCccCC-C--ceEEEEeCCC---------CCceeE
Q 018510 178 NLISRMAKVLHIKDEEVREFFENGLQSMRMNYYPPCPQPGKVMGLTPHSDS-V--ALTILLQINE---------AEGLQI 245 (355)
Q Consensus 178 ~ll~~l~~~Lgl~~~~~~~~~~~~~~~lrl~~Yp~~~~~~~~~~~~~HtD~-~--~lTll~q~~~---------~~GLqv 245 (355)
.++..|+...|++. +.+...-+-+.+|++. -....|.|. + .+|+++.-+. -|-|++
T Consensus 105 ~Fr~~Ls~iTGi~~------Lsg~~~D~~~a~Y~~G------~fL~~H~D~~~~RrvS~VLYLN~pd~~W~~e~GGeL~L 172 (633)
T 3kt7_A 105 QYRDFFGYVTKAGK------LSGSKTDMSINTYTKG------CHLLTHDDVIGSRRISFILYLPDPDRKWKSHYGGGLRL 172 (633)
T ss_dssp HHHHHHHHHHTCCC------CCSSCCCEEEEEECTT------CEEEEECCCCTTEEEEEEEECSCTTSCCCGGGBCCEEE
T ss_pred HHHHHHHHHhCCcc------cCCCceeEEEEEeCCC------CeeeecCCCCCCeEEEEEEEcCCCCCCCCccCCceEEE
Confidence 34456666666521 1111122566778662 235678884 2 4666664222 233888
Q ss_pred eeC--------CeeEeccCCCCeEEEEecchhhhhhCCccccccccccc-CCCCCeeEEEEeec
Q 018510 246 KKD--------GKWFPVRPLPNAFIVNIGDMLEVITNGVYPSIEHRAVV-NSEQERLSIATFHL 300 (355)
Q Consensus 246 ~~~--------g~W~~V~p~~g~~vVnvGd~L~~~TnG~~~s~~HRVv~-~~~~~R~Si~~F~~ 300 (355)
++. .....|.|.-|++|++.-. -+ .+.|.|.. .++..|+||+-.++
T Consensus 173 yd~d~~~~P~~d~~~~I~P~fNrLV~F~vs------p~---~S~H~V~eV~~~~~RlSItGWF~ 227 (633)
T 3kt7_A 173 FPSILPNVPHSDPSAKLVPQFNQIAFFKVL------PG---FSFHDXEEVKVDKHRLSIQGWYH 227 (633)
T ss_dssp CCEEETTEECSSCSEEECCCTTEEEEEECC------TT---TCCEEECCBCSSCCEEEEEEEEE
T ss_pred ecCCCcCCCCCCceEEEecCCCeEEEEEcC------CC---CCcCCCCccCCCCCEEEEEEEec
Confidence 752 2367899999999987531 02 23565531 12678999987764
No 22
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=33.94 E-value=60 Score=27.35 Aligned_cols=42 Identities=14% Similarity=0.144 Sum_probs=30.9
Q ss_pred EEecchhhhhhCCcc----cccccccccCCCCCeeEEEE-eecCCCC
Q 018510 263 VNIGDMLEVITNGVY----PSIEHRAVVNSEQERLSIAT-FHLVKYD 304 (355)
Q Consensus 263 VnvGd~L~~~TnG~~----~s~~HRVv~~~~~~R~Si~~-F~~p~~d 304 (355)
+.||+.-..|..|.. -|-.|.|.+.++.+|+-+.+ |.+|+.+
T Consensus 141 i~V~~~~~~w~eGe~~~fDds~~Hev~N~~d~~RvvL~~D~~rPdl~ 187 (197)
T 3rcq_A 141 IRCANETKTWEEGKVLIFDDSFEHEVWQDASSFRLIFIVDVWHPELT 187 (197)
T ss_dssp EEETTEEECCCBTCEEEECTTSCEEEEECSSSCEEEEEEEEECTTSC
T ss_pred EEECCEEEEeeCCcEEEEcCCeEEEEEECCCCCEEEEEEeeeCCCCC
Confidence 556777777777765 46789999988888977666 4567654
No 23
>2da7_A Zinc finger homeobox protein 1B; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=31.38 E-value=21 Score=24.90 Aligned_cols=42 Identities=17% Similarity=0.243 Sum_probs=35.0
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHhhhc
Q 018510 159 PSLRDTLEVYSTEVNALAMNLISRMAKVLHIKDEEVREFFEN 200 (355)
Q Consensus 159 ~~fr~~~~~y~~~~~~la~~ll~~l~~~Lgl~~~~~~~~~~~ 200 (355)
.+-+..++.||..-.+-...-+..||..+||+.+.+...|.+
T Consensus 14 k~ql~~Lk~yF~~n~~Ps~eei~~LA~~lgL~~~VVrVWFqN 55 (71)
T 2da7_A 14 KDHMSVLKAYYAMNMEPNSDELLKISIAVGLPQEFVKEWFEQ 55 (71)
T ss_dssp THHHHHHHHHHHHCSSCCHHHHHHHHHHHTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCHHHHHHHHhh
Confidence 455888999999988888888999999999999877665543
No 24
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=29.97 E-value=45 Score=29.67 Aligned_cols=53 Identities=4% Similarity=-0.032 Sum_probs=37.8
Q ss_pred CCCCCceeeCCCCCCCCchhHHHHHHHHHHhhcceEEEEecC-CCHHHHHHHHHHHHHHhc
Q 018510 43 LISKFPVIDMQSLLSEESVDSELANLDFACREWGFFQLVNHG-VSLALVDKVKKEIQEFFN 102 (355)
Q Consensus 43 ~~~~iPvIDls~l~~~d~~~~~~~~l~~A~~~~Gff~l~nhg-i~~~l~~~~~~~~~~fF~ 102 (355)
..++|+-||+++..+ ++.+++|.+++.++|++.+.+-. ++. +...+.++.|=.
T Consensus 24 ~Gaei~gvdl~~~l~----~~~~~~l~~~l~~~Gvv~fRg~~~l~~---~~~~~~~~~fG~ 77 (301)
T 1oih_A 24 IGAEIRGVKLSPDLD----AATVEAIQAALVRHKVIFFRGQTHLDD---QSQEGFAKLLGE 77 (301)
T ss_dssp SCEEEESCCCCTTCC----HHHHHHHHHHHHHHSEEEECCCTTCCH---HHHHHHHHTTSC
T ss_pred cceEEeCCCccccCC----HHHHHHHHHHHHHCCEEEECCCCCCCH---HHHHHHHHHhCC
Confidence 346788889987542 22679999999999999999987 774 334445555543
No 25
>2opi_A L-fuculose-1-phosphate aldolase; L-fuculose-1-phosphate aldolas structural genomics, PSI-2, protein structure initiative; 2.50A {Bacteroides thetaiotaomicron}
Probab=25.87 E-value=35 Score=28.87 Aligned_cols=36 Identities=25% Similarity=0.135 Sum_probs=27.7
Q ss_pred CCceeeCCCCCCCCchhHHHHHHHHHHhhcceEEEEecCC
Q 018510 46 KFPVIDMQSLLSEESVDSELANLDFACREWGFFQLVNHGV 85 (355)
Q Consensus 46 ~iPvIDls~l~~~d~~~~~~~~l~~A~~~~Gff~l~nhgi 85 (355)
.||++++.... . .+..+.+.+++++.-.+.|.|||+
T Consensus 125 ~v~~~~y~~~g---~-~~la~~i~~~l~~~~avll~nHG~ 160 (212)
T 2opi_A 125 EIPVIPYYRPG---S-PELAKAVVEAMLKHNSVLLTNHGQ 160 (212)
T ss_dssp CCCEECCCCTT---C-HHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CeEEEcCCCCC---c-HHHHHHHHHHhccCCEEEEcCCCc
Confidence 69999987542 2 225688889998888899999995
No 26
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=25.45 E-value=73 Score=28.59 Aligned_cols=65 Identities=18% Similarity=0.196 Sum_probs=40.7
Q ss_pred cccCccCC--------CceEEEEeCCCCCceeEeeCCeeEeccCCCCeEEEEecchhhhhhCCcccccccccccCCCCCe
Q 018510 221 GLTPHSDS--------VALTILLQINEAEGLQIKKDGKWFPVRPLPNAFIVNIGDMLEVITNGVYPSIEHRAVVNSEQER 292 (355)
Q Consensus 221 ~~~~HtD~--------~~lTll~q~~~~~GLqv~~~g~W~~V~p~~g~~vVnvGd~L~~~TnG~~~s~~HRVv~~~~~~R 292 (355)
.+.+|.|. +.+-++..-...+|.....+|+-+.-++ |...+ .| -+..|.|.+.+..+|
T Consensus 103 ~I~~HrD~~~l~~~~~~~~RlHIPL~Tnp~~~f~vdg~~~~m~~--GE~w~---------~d---~~~~H~v~N~g~~~R 168 (290)
T 1e5r_A 103 IVIPHRDFVELDREVDRYFRTFMVLEDSPLAFHSNEDTVIHMRP--GEIWF---------LD---AATVHSAVNFSEISR 168 (290)
T ss_dssp EEEEECCC--------CBCCEEEECSCCTTEEEEETTEEECCCT--TEEEE---------CC---TTSCEEEEESSSSCC
T ss_pred EeeCccCccccccccCCceEEEeeEecCCCcEEEECCEEEecCC--CCEEE---------Ec---CCCeeEEEcCCCCCe
Confidence 47889998 3344555432346666666665444443 44321 11 245899999998899
Q ss_pred eEEEEee
Q 018510 293 LSIATFH 299 (355)
Q Consensus 293 ~Si~~F~ 299 (355)
+.+.+=+
T Consensus 169 IhLv~D~ 175 (290)
T 1e5r_A 169 QSLCVDF 175 (290)
T ss_dssp CEEEEEE
T ss_pred EEEEEEe
Confidence 9988766
No 27
>3pvj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, Fe(II) binding, oxidoreductas; 1.85A {Pseudomonas putida KT2440} SCOP: b.82.2.5 PDB: 3v15_A 3v17_A*
Probab=22.58 E-value=63 Score=28.50 Aligned_cols=51 Identities=14% Similarity=0.135 Sum_probs=37.1
Q ss_pred CCCCCceeeCCCCCCCCchhHHHHHHHHHHhhcceEEEEecCCCHHHHHHHHHHHHHH
Q 018510 43 LISKFPVIDMQSLLSEESVDSELANLDFACREWGFFQLVNHGVSLALVDKVKKEIQEF 100 (355)
Q Consensus 43 ~~~~iPvIDls~l~~~d~~~~~~~~l~~A~~~~Gff~l~nhgi~~~l~~~~~~~~~~f 100 (355)
..++|.=|||++.++ ++..++|.+|+.++|++.+.+-.++.+.+ .+.++.|
T Consensus 12 ~Gaei~gvdl~~~l~----~~~~~~l~~~l~~~gvv~fR~q~l~~~~~---~~fa~~f 62 (277)
T 3pvj_A 12 LGAQISGVDISRDIS----AEERDAIEQALLQHQVLFLRDQPINPEQQ---ARFAARF 62 (277)
T ss_dssp SCEEEESCCTTSCCC----HHHHHHHHHHHHHHSEEEESSCCCCHHHH---HHHHGGG
T ss_pred eeEEEeCCCccccCC----HHHHHHHHHHHHHCCEEEECCCCCCHHHH---HHHHHHh
Confidence 456788899987442 23679999999999999999988875433 3344544
No 28
>2fk5_A Fuculose-1-phosphate aldolase; class II aldolase, metal binding, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2flf_A
Probab=20.39 E-value=57 Score=27.32 Aligned_cols=36 Identities=22% Similarity=0.252 Sum_probs=26.9
Q ss_pred CCcee-eCCCCCCCCchhHHHHHHHHHHhhcceEEEEecCC
Q 018510 46 KFPVI-DMQSLLSEESVDSELANLDFACREWGFFQLVNHGV 85 (355)
Q Consensus 46 ~iPvI-Dls~l~~~d~~~~~~~~l~~A~~~~Gff~l~nhgi 85 (355)
.||++ ++.... . .+..+.+.+++++.-.+.|.|||+
T Consensus 117 ~ip~~~~y~~~g---~-~ela~~i~~~l~~~~avll~nHG~ 153 (200)
T 2fk5_A 117 EVPVLAPKTVSA---T-EEAALSVAEALREHRACLLRGHGA 153 (200)
T ss_dssp CEEEECCSCCSS---S-HHHHHHHHHHHHHCSEEEETTTEE
T ss_pred CceEecCCCCCC---c-HHHHHHHHHHhCcCCEEEECCCCc
Confidence 69999 776432 2 235688889998888899999994
Done!