Query 018512
Match_columns 354
No_of_seqs 161 out of 1304
Neff 7.7
Searched_HMMs 46136
Date Fri Mar 29 09:38:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018512.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018512hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd01337 MDH_glyoxysomal_mitoch 100.0 3.6E-67 7.9E-72 498.1 33.4 309 43-352 1-310 (310)
2 TIGR01772 MDH_euk_gproteo mala 100.0 4.5E-67 9.7E-72 498.2 33.3 311 44-354 1-312 (312)
3 COG0039 Mdh Malate/lactate deh 100.0 1.5E-65 3.3E-70 482.0 30.8 297 43-353 1-312 (313)
4 PLN00106 malate dehydrogenase 100.0 1.2E-63 2.5E-68 476.6 36.0 315 32-346 8-322 (323)
5 PTZ00325 malate dehydrogenase; 100.0 6.6E-62 1.4E-66 464.1 35.4 313 40-354 6-319 (321)
6 cd05290 LDH_3 A subgroup of L- 100.0 2E-62 4.2E-67 466.4 30.9 286 44-345 1-306 (307)
7 KOG1495 Lactate dehydrogenase 100.0 3.4E-62 7.3E-67 439.5 28.0 289 40-345 18-327 (332)
8 PRK05086 malate dehydrogenase; 100.0 2.9E-61 6.4E-66 460.1 34.9 310 43-354 1-312 (312)
9 PLN02602 lactate dehydrogenase 100.0 1.4E-61 2.9E-66 467.0 32.5 311 23-348 17-348 (350)
10 TIGR01759 MalateDH-SF1 malate 100.0 1.1E-61 2.3E-66 463.7 30.5 296 41-348 2-323 (323)
11 cd05293 LDH_1 A subgroup of L- 100.0 2E-61 4.3E-66 460.8 31.3 290 42-346 3-311 (312)
12 PRK00066 ldh L-lactate dehydro 100.0 6.4E-60 1.4E-64 451.4 31.8 292 41-348 5-313 (315)
13 TIGR01771 L-LDH-NAD L-lactate 100.0 2.5E-60 5.4E-65 451.0 27.1 281 47-343 1-299 (299)
14 PRK05442 malate dehydrogenase; 100.0 6.2E-60 1.3E-64 452.1 29.7 298 41-351 3-325 (326)
15 cd00704 MDH Malate dehydrogena 100.0 2.3E-59 5E-64 448.3 29.0 294 43-349 1-323 (323)
16 PLN00112 malate dehydrogenase 100.0 5.4E-59 1.2E-63 457.9 31.6 299 40-351 98-423 (444)
17 TIGR01757 Malate-DH_plant mala 100.0 1E-58 2.3E-63 449.8 31.6 300 39-351 41-367 (387)
18 PTZ00117 malate dehydrogenase; 100.0 3.5E-58 7.7E-63 440.5 33.8 297 41-351 4-317 (319)
19 cd05291 HicDH_like L-2-hydroxy 100.0 1.3E-58 2.8E-63 441.8 30.6 288 43-346 1-305 (306)
20 cd01338 MDH_choloroplast_like 100.0 2.1E-58 4.6E-63 441.4 29.8 295 41-348 1-320 (322)
21 PTZ00082 L-lactate dehydrogena 100.0 7.5E-58 1.6E-62 438.0 33.0 293 41-347 5-319 (321)
22 KOG1494 NAD-dependent malate d 100.0 3.9E-58 8.5E-63 415.1 29.1 337 8-353 3-340 (345)
23 cd00300 LDH_like L-lactate deh 100.0 2.6E-58 5.7E-63 438.2 29.4 286 45-345 1-299 (300)
24 TIGR01763 MalateDH_bact malate 100.0 7.8E-58 1.7E-62 435.4 30.5 289 43-347 2-304 (305)
25 cd05292 LDH_2 A subgroup of L- 100.0 1.5E-56 3.3E-61 427.6 32.0 288 43-346 1-306 (308)
26 TIGR01758 MDH_euk_cyt malate d 100.0 1.4E-56 3.1E-61 429.2 30.3 296 44-349 1-323 (324)
27 cd01336 MDH_cytoplasmic_cytoso 100.0 1.5E-56 3.2E-61 429.7 27.7 296 41-349 1-325 (325)
28 cd01339 LDH-like_MDH L-lactate 100.0 1.3E-54 2.9E-59 413.3 29.6 287 45-345 1-299 (300)
29 PRK06223 malate dehydrogenase; 100.0 3.2E-54 6.9E-59 411.9 32.0 292 42-347 2-305 (307)
30 cd05294 LDH-like_MDH_nadp A la 100.0 2.4E-54 5.2E-59 412.4 30.9 290 43-346 1-307 (309)
31 PLN00135 malate dehydrogenase 100.0 3.1E-54 6.7E-59 409.4 28.1 272 70-353 15-309 (309)
32 cd05295 MDH_like Malate dehydr 100.0 1.8E-54 3.8E-59 425.7 26.8 294 40-349 121-451 (452)
33 TIGR01756 LDH_protist lactate 100.0 3.1E-53 6.7E-58 403.5 27.9 272 70-352 17-312 (313)
34 cd00650 LDH_MDH_like NAD-depen 100.0 5.6E-50 1.2E-54 374.7 28.4 254 45-345 1-262 (263)
35 KOG1496 Malate dehydrogenase [ 100.0 1.8E-46 3.8E-51 332.8 21.6 304 41-353 3-331 (332)
36 PF02866 Ldh_1_C: lactate/mala 100.0 5.9E-33 1.3E-37 244.2 13.7 159 188-352 1-174 (174)
37 PF00056 Ldh_1_N: lactate/mala 100.0 1.3E-31 2.8E-36 227.7 11.8 139 43-186 1-141 (141)
38 cd05197 GH4_glycoside_hydrolas 100.0 1.2E-29 2.5E-34 251.1 25.2 291 43-349 1-392 (425)
39 PRK15076 alpha-galactosidase; 100.0 1.2E-29 2.5E-34 251.9 23.8 291 42-349 1-386 (431)
40 cd05296 GH4_P_beta_glucosidase 100.0 2.8E-29 6.1E-34 248.0 26.1 286 43-348 1-380 (419)
41 cd05298 GH4_GlvA_pagL_like Gly 100.0 6.3E-28 1.4E-32 239.2 28.1 293 43-349 1-395 (437)
42 COG1486 CelF Alpha-galactosida 99.9 3.3E-26 7.1E-31 222.8 22.9 293 41-349 2-398 (442)
43 cd05297 GH4_alpha_glucosidase_ 99.9 1.3E-25 2.8E-30 223.2 24.9 291 43-349 1-389 (423)
44 PF02056 Glyco_hydro_4: Family 99.8 7E-20 1.5E-24 160.9 14.1 152 44-205 1-183 (183)
45 COG1004 Ugd Predicted UDP-gluc 98.9 6.1E-08 1.3E-12 93.8 16.1 114 43-169 1-131 (414)
46 PF02737 3HCDH_N: 3-hydroxyacy 98.7 2.9E-08 6.3E-13 87.8 7.5 118 44-189 1-137 (180)
47 COG1250 FadB 3-hydroxyacyl-CoA 98.7 5.9E-08 1.3E-12 92.2 9.7 122 42-188 3-140 (307)
48 PF01073 3Beta_HSD: 3-beta hyd 98.7 1.8E-07 4E-12 88.4 11.3 111 46-156 1-113 (280)
49 PRK07066 3-hydroxybutyryl-CoA 98.6 4.8E-07 1E-11 87.0 11.6 118 43-187 8-140 (321)
50 PLN02166 dTDP-glucose 4,6-dehy 98.6 6.6E-07 1.4E-11 89.8 13.0 174 39-218 117-297 (436)
51 COG1086 Predicted nucleoside-d 98.6 1E-06 2.2E-11 88.8 13.7 166 42-230 250-433 (588)
52 PRK07819 3-hydroxybutyryl-CoA 98.5 9.4E-07 2E-11 83.8 11.9 119 43-189 6-144 (286)
53 PRK15181 Vi polysaccharide bio 98.5 2.4E-06 5.3E-11 83.0 15.0 174 41-218 14-199 (348)
54 PF03721 UDPG_MGDP_dh_N: UDP-g 98.5 3.4E-07 7.3E-12 81.4 7.7 123 43-179 1-141 (185)
55 PF02719 Polysacc_synt_2: Poly 98.5 6.2E-08 1.3E-12 91.3 3.1 120 45-165 1-138 (293)
56 TIGR02441 fa_ox_alpha_mit fatt 98.5 6.3E-07 1.4E-11 95.3 9.8 119 41-187 334-471 (737)
57 TIGR02437 FadB fatty oxidation 98.4 8E-07 1.7E-11 94.3 10.1 121 40-188 311-450 (714)
58 PRK11730 fadB multifunctional 98.4 1.3E-06 2.9E-11 92.7 11.7 119 42-188 313-450 (715)
59 TIGR01915 npdG NADPH-dependent 98.4 4E-06 8.7E-11 76.3 13.2 102 43-164 1-106 (219)
60 KOG2304 3-hydroxyacyl-CoA dehy 98.4 2.9E-07 6.3E-12 82.6 4.7 124 40-188 9-154 (298)
61 PLN02427 UDP-apiose/xylose syn 98.4 3.6E-06 7.7E-11 82.9 13.0 115 39-159 11-135 (386)
62 PRK11154 fadJ multifunctional 98.4 9.2E-07 2E-11 93.8 9.1 120 41-188 308-447 (708)
63 TIGR02440 FadJ fatty oxidation 98.4 2.7E-06 5.8E-11 90.2 12.6 120 41-188 303-442 (699)
64 PRK08293 3-hydroxybutyryl-CoA 98.4 3.1E-06 6.7E-11 80.3 11.8 119 43-188 4-142 (287)
65 KOG1502 Flavonol reductase/cin 98.3 9.9E-06 2.1E-10 77.4 13.5 106 41-150 5-119 (327)
66 PLN00198 anthocyanidin reducta 98.3 1.5E-05 3.3E-10 76.8 15.0 177 39-218 6-202 (338)
67 PF01210 NAD_Gly3P_dh_N: NAD-d 98.3 2.5E-06 5.5E-11 73.6 8.2 94 44-159 1-103 (157)
68 PLN02662 cinnamyl-alcohol dehy 98.3 1.2E-05 2.5E-10 76.8 13.5 113 42-156 4-124 (322)
69 PLN02206 UDP-glucuronate decar 98.3 8.1E-06 1.8E-10 82.1 12.6 113 39-159 116-232 (442)
70 PLN02650 dihydroflavonol-4-red 98.3 1.9E-05 4.2E-10 76.5 14.7 178 40-219 3-198 (351)
71 COG1087 GalE UDP-glucose 4-epi 98.3 1.4E-05 3E-10 75.0 12.8 165 43-218 1-176 (329)
72 TIGR02622 CDP_4_6_dhtase CDP-g 98.3 2.2E-05 4.7E-10 76.2 14.8 174 42-218 4-193 (349)
73 PRK08125 bifunctional UDP-gluc 98.2 1.4E-05 3.1E-10 84.3 13.9 171 40-218 313-497 (660)
74 PLN02695 GDP-D-mannose-3',5'-e 98.2 1E-05 2.2E-10 79.5 11.8 175 39-219 18-202 (370)
75 TIGR02279 PaaC-3OHAcCoADH 3-hy 98.2 5.7E-06 1.2E-10 84.4 10.0 122 41-189 4-143 (503)
76 PLN02353 probable UDP-glucose 98.2 1E-05 2.2E-10 81.8 11.7 120 42-168 1-137 (473)
77 PRK06035 3-hydroxyacyl-CoA deh 98.2 8.9E-06 1.9E-10 77.2 10.6 118 43-188 4-143 (291)
78 TIGR01181 dTDP_gluc_dehyt dTDP 98.2 2.3E-05 4.9E-10 74.1 13.1 167 44-218 1-184 (317)
79 CHL00194 ycf39 Ycf39; Provisio 98.2 1.1E-05 2.4E-10 77.3 10.8 108 43-158 1-109 (317)
80 PRK05808 3-hydroxybutyryl-CoA 98.2 1.5E-05 3.2E-10 75.4 11.5 118 43-188 4-140 (282)
81 PLN02214 cinnamoyl-CoA reducta 98.2 3.5E-05 7.6E-10 74.8 14.1 170 42-218 10-195 (342)
82 TIGR03589 PseB UDP-N-acetylglu 98.2 1.9E-05 4.1E-10 76.0 11.9 113 42-159 4-124 (324)
83 PRK11908 NAD-dependent epimera 98.1 2.7E-05 5.8E-10 75.5 12.3 164 42-218 1-183 (347)
84 COG0451 WcaG Nucleoside-diphos 98.1 2.1E-05 4.6E-10 74.3 10.7 170 43-220 1-178 (314)
85 TIGR03466 HpnA hopanoid-associ 98.1 3E-05 6.5E-10 73.8 11.7 112 43-159 1-113 (328)
86 PRK08268 3-hydroxy-acyl-CoA de 98.1 2.8E-05 6.1E-10 79.5 12.0 120 43-190 8-146 (507)
87 PRK06130 3-hydroxybutyryl-CoA 98.1 2.2E-05 4.9E-10 75.1 10.5 120 42-188 4-137 (311)
88 PLN02572 UDP-sulfoquinovose sy 98.1 3E-05 6.5E-10 78.1 11.4 187 28-219 34-263 (442)
89 PRK07530 3-hydroxybutyryl-CoA 98.1 1.7E-05 3.8E-10 75.2 9.2 121 42-190 4-143 (292)
90 PRK10084 dTDP-glucose 4,6 dehy 98.1 5.8E-05 1.2E-09 73.1 13.0 176 43-219 1-202 (352)
91 PRK09260 3-hydroxybutyryl-CoA 98.0 2.8E-05 6E-10 73.7 10.1 100 43-164 2-120 (288)
92 PRK06129 3-hydroxyacyl-CoA deh 98.0 3.1E-05 6.7E-10 74.2 10.4 103 42-165 2-122 (308)
93 PLN02545 3-hydroxybutyryl-CoA 98.0 6.5E-05 1.4E-09 71.4 12.4 103 43-165 5-123 (295)
94 TIGR01472 gmd GDP-mannose 4,6- 98.0 8.5E-05 1.8E-09 71.8 13.4 159 43-206 1-177 (343)
95 PRK10217 dTDP-glucose 4,6-dehy 98.0 0.0001 2.2E-09 71.5 13.9 176 43-219 2-195 (355)
96 PRK06194 hypothetical protein; 98.0 7E-05 1.5E-09 70.2 12.4 159 42-216 6-192 (287)
97 PLN02896 cinnamyl-alcohol dehy 98.0 6.4E-05 1.4E-09 73.0 12.4 173 41-218 9-210 (353)
98 PRK07531 bifunctional 3-hydrox 98.0 4.7E-05 1E-09 77.7 11.8 103 43-166 5-121 (495)
99 PLN02778 3,5-epimerase/4-reduc 98.0 9.9E-05 2.1E-09 70.3 13.2 97 40-159 7-110 (298)
100 PRK10675 UDP-galactose-4-epime 98.0 7.3E-05 1.6E-09 71.8 12.5 111 43-155 1-120 (338)
101 PLN02989 cinnamyl-alcohol dehy 98.0 0.00023 4.9E-09 68.2 15.2 175 42-218 5-198 (325)
102 COG0240 GpsA Glycerol-3-phosph 98.0 0.00014 3.1E-09 69.5 13.4 117 42-187 1-131 (329)
103 PLN02260 probable rhamnose bio 98.0 0.00017 3.8E-09 76.2 15.6 180 40-219 4-194 (668)
104 PF13460 NAD_binding_10: NADH( 97.9 0.00016 3.5E-09 63.1 12.0 93 45-158 1-97 (183)
105 PLN02583 cinnamoyl-CoA reducta 97.9 0.00027 5.8E-09 67.1 14.2 112 42-157 6-126 (297)
106 PLN03209 translocon at the inn 97.9 0.00014 3E-09 74.8 12.8 116 42-159 80-208 (576)
107 PLN02986 cinnamyl-alcohol dehy 97.9 0.00035 7.6E-09 66.8 14.9 106 42-149 5-117 (322)
108 TIGR03026 NDP-sugDHase nucleot 97.9 0.0003 6.4E-09 70.1 14.6 119 43-175 1-137 (411)
109 PRK15057 UDP-glucose 6-dehydro 97.9 0.00015 3.2E-09 71.8 12.1 114 43-168 1-127 (388)
110 PLN02653 GDP-mannose 4,6-dehyd 97.9 0.00012 2.6E-09 70.7 11.3 164 38-206 2-183 (340)
111 TIGR01777 yfcH conserved hypot 97.9 0.00012 2.5E-09 68.5 10.9 100 45-153 1-104 (292)
112 COG1088 RfbB dTDP-D-glucose 4, 97.9 0.00017 3.7E-09 67.7 11.6 166 43-208 1-175 (340)
113 PF03807 F420_oxidored: NADP o 97.9 4.5E-05 9.7E-10 59.8 6.6 94 44-161 1-96 (96)
114 COG2085 Predicted dinucleotide 97.8 0.00016 3.4E-09 64.9 10.6 97 42-163 1-97 (211)
115 KOG1429 dTDP-glucose 4-6-dehyd 97.8 4E-05 8.7E-10 71.3 6.5 115 39-159 24-140 (350)
116 PRK09987 dTDP-4-dehydrorhamnos 97.8 8.3E-05 1.8E-09 70.7 8.7 99 43-159 1-103 (299)
117 PRK06522 2-dehydropantoate 2-r 97.8 0.00042 9.1E-09 65.7 13.0 102 43-166 1-107 (304)
118 PRK07201 short chain dehydroge 97.7 0.00054 1.2E-08 72.0 14.5 115 43-159 1-125 (657)
119 PRK00094 gpsA NAD(P)H-dependen 97.7 0.00025 5.5E-09 67.9 10.8 100 42-163 1-109 (325)
120 PRK12921 2-dehydropantoate 2-r 97.7 0.00067 1.5E-08 64.4 13.3 119 43-190 1-127 (305)
121 PLN02253 xanthoxin dehydrogena 97.7 0.00078 1.7E-08 62.9 13.6 147 41-204 17-187 (280)
122 PRK14619 NAD(P)H-dependent gly 97.7 0.00027 5.9E-09 67.7 10.3 79 42-161 4-84 (308)
123 PRK11150 rfaD ADP-L-glycero-D- 97.7 0.00042 9E-09 65.8 11.5 160 45-218 2-174 (308)
124 PLN02240 UDP-glucose 4-epimera 97.7 0.00059 1.3E-08 65.9 12.6 113 42-156 5-129 (352)
125 PRK13394 3-hydroxybutyrate deh 97.7 0.00077 1.7E-08 62.0 12.6 114 42-159 7-143 (262)
126 KOG1430 C-3 sterol dehydrogena 97.7 0.00031 6.7E-09 68.3 10.1 114 40-155 2-122 (361)
127 PTZ00345 glycerol-3-phosphate 97.6 0.00044 9.5E-09 67.8 11.3 106 28-159 3-129 (365)
128 TIGR01214 rmlD dTDP-4-dehydror 97.6 0.0003 6.4E-09 65.9 9.8 89 44-151 1-93 (287)
129 PLN02657 3,8-divinyl protochlo 97.6 0.00062 1.3E-08 67.4 12.4 114 41-159 59-182 (390)
130 PRK08229 2-dehydropantoate 2-r 97.6 0.00052 1.1E-08 66.4 11.7 101 42-165 2-113 (341)
131 PF03446 NAD_binding_2: NAD bi 97.6 0.00035 7.6E-09 60.5 9.4 64 42-117 1-64 (163)
132 PRK05865 hypothetical protein; 97.6 0.00043 9.3E-09 74.6 11.6 104 43-162 1-105 (854)
133 PRK08643 acetoin reductase; Va 97.6 0.0029 6.2E-08 58.2 15.6 114 43-160 3-139 (256)
134 PLN02686 cinnamoyl-CoA reducta 97.6 0.00037 7.9E-09 68.4 10.1 178 39-218 50-250 (367)
135 PF01370 Epimerase: NAD depend 97.6 0.00015 3.3E-09 65.5 6.7 167 45-218 1-174 (236)
136 TIGR02197 heptose_epim ADP-L-g 97.6 0.00051 1.1E-08 65.0 10.6 109 45-159 1-113 (314)
137 COG1748 LYS9 Saccharopine dehy 97.6 0.00081 1.8E-08 66.1 11.8 77 42-121 1-79 (389)
138 PRK14620 NAD(P)H-dependent gly 97.6 0.00054 1.2E-08 66.0 10.5 97 43-163 1-110 (326)
139 PRK06249 2-dehydropantoate 2-r 97.6 0.00052 1.1E-08 65.8 10.2 122 39-190 2-131 (313)
140 PRK14618 NAD(P)H-dependent gly 97.6 0.00073 1.6E-08 65.2 11.3 71 42-118 4-82 (328)
141 PRK05866 short chain dehydroge 97.6 0.0014 3E-08 62.1 13.1 106 12-121 7-128 (293)
142 PRK12384 sorbitol-6-phosphate 97.5 0.0031 6.8E-08 58.0 14.9 117 43-161 3-142 (259)
143 PRK15182 Vi polysaccharide bio 97.5 0.0012 2.5E-08 66.2 12.8 113 40-168 4-130 (425)
144 PRK08267 short chain dehydroge 97.5 0.0019 4E-08 59.6 13.4 114 43-160 2-136 (260)
145 TIGR01179 galE UDP-glucose-4-e 97.5 0.00076 1.6E-08 63.9 10.9 108 44-156 1-118 (328)
146 PRK12320 hypothetical protein; 97.5 0.00076 1.6E-08 71.2 11.8 100 43-159 1-101 (699)
147 PRK07523 gluconate 5-dehydroge 97.5 0.002 4.3E-08 59.3 13.2 115 42-160 10-146 (255)
148 PRK05717 oxidoreductase; Valid 97.5 0.0015 3.2E-08 60.2 12.2 148 42-204 10-176 (255)
149 PRK11064 wecC UDP-N-acetyl-D-m 97.5 0.0014 2.9E-08 65.6 12.6 109 42-168 3-129 (415)
150 PRK12829 short chain dehydroge 97.5 0.0027 5.8E-08 58.4 13.8 114 40-159 9-146 (264)
151 TIGR03376 glycerol3P_DH glycer 97.5 0.00069 1.5E-08 65.9 10.0 96 44-159 1-116 (342)
152 PRK12429 3-hydroxybutyrate deh 97.5 0.001 2.3E-08 60.9 10.8 113 42-159 4-139 (258)
153 PRK12937 short chain dehydroge 97.5 0.0019 4.2E-08 58.7 12.5 147 42-204 5-172 (245)
154 PRK07102 short chain dehydroge 97.5 0.0043 9.3E-08 56.6 14.8 115 43-160 2-135 (243)
155 PRK12439 NAD(P)H-dependent gly 97.5 0.00066 1.4E-08 66.0 9.8 100 40-164 5-116 (341)
156 PRK07231 fabG 3-ketoacyl-(acyl 97.5 0.0039 8.4E-08 56.8 14.4 36 41-78 4-39 (251)
157 PRK07326 short chain dehydroge 97.5 0.0022 4.8E-08 58.1 12.7 114 43-161 7-141 (237)
158 PRK07814 short chain dehydroge 97.4 0.0024 5.2E-08 59.2 12.8 148 41-204 9-179 (263)
159 PRK08340 glucose-1-dehydrogena 97.4 0.0021 4.7E-08 59.3 12.4 113 43-160 1-138 (259)
160 PRK06180 short chain dehydroge 97.4 0.0036 7.9E-08 58.5 14.1 114 42-160 4-137 (277)
161 PRK06924 short chain dehydroge 97.4 0.0023 5E-08 58.6 12.4 34 43-78 2-35 (251)
162 PRK14982 acyl-ACP reductase; P 97.4 0.00085 1.8E-08 65.0 9.8 128 10-165 116-252 (340)
163 PRK05876 short chain dehydroge 97.4 0.003 6.5E-08 59.2 13.2 115 42-160 6-143 (275)
164 PF10727 Rossmann-like: Rossma 97.4 0.001 2.2E-08 55.4 8.7 104 39-168 7-115 (127)
165 PRK07576 short chain dehydroge 97.4 0.0023 5E-08 59.4 12.1 119 42-162 9-146 (264)
166 PRK06482 short chain dehydroge 97.4 0.0043 9.2E-08 57.8 13.7 111 43-159 3-134 (276)
167 PRK07806 short chain dehydroge 97.4 0.0013 2.9E-08 60.0 10.0 114 42-159 6-134 (248)
168 PLN00141 Tic62-NAD(P)-related 97.4 0.0013 2.8E-08 60.7 10.0 114 41-160 16-133 (251)
169 PRK10538 malonic semialdehyde 97.4 0.0023 5.1E-08 58.6 11.7 34 43-78 1-34 (248)
170 PRK12827 short chain dehydroge 97.4 0.0063 1.4E-07 55.3 14.3 102 42-147 6-130 (249)
171 PRK07417 arogenate dehydrogena 97.3 0.001 2.2E-08 62.8 9.2 65 43-118 1-65 (279)
172 PRK07666 fabG 3-ketoacyl-(acyl 97.3 0.0052 1.1E-07 55.8 13.6 116 42-161 7-144 (239)
173 PRK07069 short chain dehydroge 97.3 0.0099 2.2E-07 54.2 15.6 114 44-160 1-138 (251)
174 PRK06172 short chain dehydroge 97.3 0.0031 6.6E-08 57.9 12.2 155 42-215 7-185 (253)
175 PRK09135 pteridine reductase; 97.3 0.0051 1.1E-07 55.9 13.6 147 43-204 7-175 (249)
176 PRK07067 sorbitol dehydrogenas 97.3 0.002 4.3E-08 59.3 10.9 145 43-203 7-171 (257)
177 TIGR01832 kduD 2-deoxy-D-gluco 97.3 0.01 2.2E-07 54.2 15.4 116 41-160 4-140 (248)
178 PRK05875 short chain dehydroge 97.3 0.0053 1.1E-07 57.1 13.8 159 42-216 7-188 (276)
179 PRK08278 short chain dehydroge 97.3 0.0087 1.9E-07 55.9 15.3 160 42-215 6-192 (273)
180 PRK12828 short chain dehydroge 97.3 0.0024 5.3E-08 57.6 11.1 117 41-160 6-141 (239)
181 PRK06124 gluconate 5-dehydroge 97.3 0.0025 5.4E-08 58.6 11.2 120 40-161 9-148 (256)
182 TIGR01746 Thioester-redct thio 97.3 0.003 6.6E-08 60.6 12.2 113 44-157 1-134 (367)
183 PLN02996 fatty acyl-CoA reduct 97.3 0.005 1.1E-07 62.9 14.2 117 42-159 11-161 (491)
184 PRK07832 short chain dehydroge 97.3 0.019 4.1E-07 53.5 17.1 118 43-162 1-140 (272)
185 TIGR03206 benzo_BadH 2-hydroxy 97.3 0.0037 7.9E-08 57.0 12.0 115 42-160 3-139 (250)
186 PRK08945 putative oxoacyl-(acy 97.3 0.0071 1.5E-07 55.3 14.0 118 41-160 11-152 (247)
187 PRK08265 short chain dehydroge 97.3 0.0069 1.5E-07 56.1 13.9 112 42-160 6-137 (261)
188 PRK06914 short chain dehydroge 97.3 0.011 2.4E-07 55.1 15.3 114 43-159 4-139 (280)
189 PRK06181 short chain dehydroge 97.3 0.0042 9.1E-08 57.3 12.2 114 43-160 2-137 (263)
190 PRK12936 3-ketoacyl-(acyl-carr 97.3 0.0035 7.6E-08 56.9 11.5 114 42-161 6-140 (245)
191 PRK12939 short chain dehydroge 97.3 0.0046 9.9E-08 56.3 12.3 116 41-160 6-143 (250)
192 COG0300 DltE Short-chain dehyd 97.2 0.0076 1.7E-07 56.4 13.5 117 39-159 3-142 (265)
193 PRK12746 short chain dehydroge 97.2 0.011 2.5E-07 54.0 14.7 147 42-204 6-179 (254)
194 PRK07856 short chain dehydroge 97.2 0.005 1.1E-07 56.5 12.2 141 42-204 6-167 (252)
195 PRK07890 short chain dehydroge 97.2 0.0028 6E-08 58.2 10.5 115 42-160 5-141 (258)
196 TIGR01830 3oxo_ACP_reduc 3-oxo 97.2 0.0048 1E-07 55.7 11.9 115 45-161 1-136 (239)
197 PRK12745 3-ketoacyl-(acyl-carr 97.2 0.016 3.5E-07 53.0 15.5 34 43-78 3-36 (256)
198 PRK07502 cyclohexadienyl dehyd 97.2 0.0022 4.7E-08 61.4 9.9 68 43-118 7-74 (307)
199 PRK06128 oxidoreductase; Provi 97.2 0.0077 1.7E-07 57.1 13.6 116 41-160 54-192 (300)
200 PRK06182 short chain dehydroge 97.2 0.0046 1E-07 57.5 11.7 113 42-160 3-133 (273)
201 TIGR02354 thiF_fam2 thiamine b 97.2 0.0039 8.6E-08 56.0 10.7 36 40-77 19-54 (200)
202 PRK08213 gluconate 5-dehydroge 97.2 0.0087 1.9E-07 55.1 13.3 118 39-160 9-149 (259)
203 PRK06701 short chain dehydroge 97.2 0.0093 2E-07 56.4 13.7 118 39-160 43-182 (290)
204 PRK07024 short chain dehydroge 97.2 0.0041 8.8E-08 57.4 11.0 35 42-78 2-36 (257)
205 PRK06138 short chain dehydroge 97.2 0.0046 9.9E-08 56.4 11.2 112 42-159 5-139 (252)
206 PRK12826 3-ketoacyl-(acyl-carr 97.2 0.005 1.1E-07 56.0 11.5 113 42-159 6-141 (251)
207 PRK09291 short chain dehydroge 97.2 0.012 2.7E-07 53.8 14.2 115 43-160 3-132 (257)
208 TIGR00872 gnd_rel 6-phosphoglu 97.2 0.0038 8.2E-08 59.5 11.0 95 43-162 1-96 (298)
209 PLN02725 GDP-4-keto-6-deoxyman 97.2 0.0011 2.4E-08 62.5 7.2 96 46-159 1-101 (306)
210 PRK07774 short chain dehydroge 97.1 0.005 1.1E-07 56.2 11.3 114 42-159 6-144 (250)
211 PRK08655 prephenate dehydrogen 97.1 0.003 6.6E-08 63.5 10.6 66 43-118 1-66 (437)
212 COG4221 Short-chain alcohol de 97.1 0.02 4.4E-07 52.6 14.7 157 43-215 7-181 (246)
213 PRK06841 short chain dehydroge 97.1 0.0051 1.1E-07 56.4 11.2 114 41-160 14-148 (255)
214 PLN02688 pyrroline-5-carboxyla 97.1 0.0043 9.3E-08 57.9 10.7 66 43-118 1-69 (266)
215 PRK12935 acetoacetyl-CoA reduc 97.1 0.011 2.5E-07 53.8 13.3 115 42-160 6-143 (247)
216 PRK06101 short chain dehydroge 97.1 0.011 2.4E-07 53.9 13.2 145 43-203 2-159 (240)
217 PRK06179 short chain dehydroge 97.1 0.0058 1.2E-07 56.7 11.5 110 43-160 5-132 (270)
218 TIGR01963 PHB_DH 3-hydroxybuty 97.1 0.0085 1.8E-07 54.7 12.5 113 43-160 2-137 (255)
219 PRK05650 short chain dehydroge 97.1 0.0064 1.4E-07 56.5 11.8 113 43-160 1-136 (270)
220 PF04321 RmlD_sub_bind: RmlD s 97.1 0.00051 1.1E-08 65.1 4.4 96 43-159 1-100 (286)
221 PRK08085 gluconate 5-dehydroge 97.1 0.0066 1.4E-07 55.7 11.7 114 42-159 9-144 (254)
222 PRK12481 2-deoxy-D-gluconate 3 97.1 0.0049 1.1E-07 56.8 10.9 156 42-215 8-184 (251)
223 PRK07097 gluconate 5-dehydroge 97.1 0.0085 1.8E-07 55.5 12.5 147 41-204 9-178 (265)
224 PRK07680 late competence prote 97.1 0.0038 8.2E-08 58.7 10.2 97 43-163 1-100 (273)
225 PRK08993 2-deoxy-D-gluconate 3 97.1 0.013 2.9E-07 53.8 13.7 115 42-160 10-145 (253)
226 PRK11880 pyrroline-5-carboxyla 97.1 0.003 6.5E-08 59.0 9.4 95 42-162 2-97 (267)
227 PRK05854 short chain dehydroge 97.1 0.0084 1.8E-07 57.4 12.7 172 40-215 12-205 (313)
228 PRK08589 short chain dehydroge 97.1 0.009 1.9E-07 55.7 12.6 117 41-161 5-142 (272)
229 PRK07063 short chain dehydroge 97.1 0.022 4.7E-07 52.4 15.1 116 42-160 7-145 (260)
230 PF01118 Semialdhyde_dh: Semia 97.1 0.0013 2.8E-08 54.1 6.1 72 44-118 1-74 (121)
231 PLN02260 probable rhamnose bio 97.1 0.0049 1.1E-07 65.2 12.0 92 39-152 377-475 (668)
232 PLN00016 RNA-binding protein; 97.1 0.0039 8.4E-08 61.3 10.4 101 39-156 49-162 (378)
233 TIGR03325 BphB_TodD cis-2,3-di 97.1 0.0055 1.2E-07 56.7 10.9 35 42-78 5-39 (262)
234 COG2084 MmsB 3-hydroxyisobutyr 97.1 0.0036 7.7E-08 59.2 9.6 65 43-118 1-65 (286)
235 PRK12825 fabG 3-ketoacyl-(acyl 97.1 0.0069 1.5E-07 54.8 11.3 102 41-146 5-126 (249)
236 PRK06935 2-deoxy-D-gluconate 3 97.1 0.0083 1.8E-07 55.3 11.9 115 41-160 14-150 (258)
237 PRK05855 short chain dehydroge 97.1 0.022 4.7E-07 58.5 16.2 118 39-160 312-452 (582)
238 PRK06113 7-alpha-hydroxysteroi 97.0 0.011 2.4E-07 54.3 12.7 116 41-160 10-146 (255)
239 COG2910 Putative NADH-flavin r 97.0 0.0086 1.9E-07 52.7 10.9 104 43-159 1-104 (211)
240 PRK07424 bifunctional sterol d 97.0 0.011 2.3E-07 58.9 13.2 102 41-145 177-283 (406)
241 PRK05653 fabG 3-ketoacyl-(acyl 97.0 0.0066 1.4E-07 54.9 10.9 114 42-159 5-140 (246)
242 PRK07109 short chain dehydroge 97.0 0.013 2.8E-07 56.7 13.5 114 41-159 7-143 (334)
243 TIGR02415 23BDH acetoin reduct 97.0 0.011 2.4E-07 54.0 12.4 112 44-159 2-136 (254)
244 PRK07478 short chain dehydroge 97.0 0.018 3.8E-07 52.9 13.8 147 42-204 6-176 (254)
245 TIGR01505 tartro_sem_red 2-hyd 97.0 0.0031 6.8E-08 59.7 8.9 63 44-118 1-63 (291)
246 PRK11559 garR tartronate semia 97.0 0.0038 8.1E-08 59.3 9.4 64 43-118 3-66 (296)
247 PRK05557 fabG 3-ketoacyl-(acyl 97.0 0.021 4.5E-07 51.7 14.0 115 42-160 5-142 (248)
248 PRK06545 prephenate dehydrogen 97.0 0.0046 1E-07 60.5 10.3 68 43-118 1-68 (359)
249 PRK08642 fabG 3-ketoacyl-(acyl 97.0 0.014 3.1E-07 53.2 13.0 147 42-204 5-178 (253)
250 PRK12823 benD 1,6-dihydroxycyc 97.0 0.012 2.6E-07 54.1 12.6 144 41-203 7-173 (260)
251 PRK08277 D-mannonate oxidoredu 97.0 0.019 4.1E-07 53.5 14.0 36 41-78 9-44 (278)
252 PRK06197 short chain dehydroge 97.0 0.013 2.9E-07 55.5 13.0 117 41-160 15-152 (306)
253 PRK06500 short chain dehydroge 97.0 0.012 2.7E-07 53.5 12.4 101 42-149 6-125 (249)
254 PRK06949 short chain dehydroge 97.0 0.0075 1.6E-07 55.3 11.0 37 40-78 7-43 (258)
255 PRK05993 short chain dehydroge 97.0 0.0072 1.6E-07 56.5 11.0 112 43-160 5-135 (277)
256 PRK08628 short chain dehydroge 97.0 0.026 5.5E-07 51.9 14.5 115 41-159 6-139 (258)
257 PRK05565 fabG 3-ketoacyl-(acyl 97.0 0.012 2.5E-07 53.4 12.1 103 42-148 5-127 (247)
258 COG0677 WecC UDP-N-acetyl-D-ma 97.0 0.0091 2E-07 58.3 11.6 124 42-179 9-149 (436)
259 PRK07825 short chain dehydroge 97.0 0.019 4.2E-07 53.3 13.8 113 42-160 5-137 (273)
260 PRK06198 short chain dehydroge 97.0 0.02 4.3E-07 52.6 13.7 115 42-160 6-144 (260)
261 PRK08226 short chain dehydroge 97.0 0.015 3.3E-07 53.5 13.0 115 41-159 5-140 (263)
262 COG1090 Predicted nucleoside-d 97.0 0.0075 1.6E-07 56.3 10.6 98 45-153 1-103 (297)
263 PRK08339 short chain dehydroge 97.0 0.056 1.2E-06 50.2 16.8 114 43-160 9-144 (263)
264 PF11975 Glyco_hydro_4C: Famil 97.0 0.0056 1.2E-07 56.2 9.8 78 263-349 134-215 (232)
265 PRK08263 short chain dehydroge 97.0 0.0051 1.1E-07 57.4 9.6 111 43-159 4-135 (275)
266 PRK06398 aldose dehydrogenase; 97.0 0.015 3.1E-07 53.9 12.6 148 42-215 6-171 (258)
267 PRK12549 shikimate 5-dehydroge 96.9 0.0051 1.1E-07 58.3 9.6 72 41-117 126-199 (284)
268 TIGR02632 RhaD_aldol-ADH rhamn 96.9 0.013 2.9E-07 62.2 13.7 117 41-159 413-552 (676)
269 PRK07985 oxidoreductase; Provi 96.9 0.041 8.8E-07 52.1 15.9 117 40-160 47-186 (294)
270 PRK12480 D-lactate dehydrogena 96.9 0.0055 1.2E-07 59.4 10.0 63 40-118 144-206 (330)
271 PRK07035 short chain dehydroge 96.9 0.011 2.4E-07 54.1 11.5 115 42-160 8-145 (252)
272 PRK07634 pyrroline-5-carboxyla 96.9 0.0085 1.8E-07 55.1 10.7 70 41-118 3-74 (245)
273 PF05368 NmrA: NmrA-like famil 96.9 0.003 6.4E-08 57.5 7.6 97 45-154 1-98 (233)
274 PRK08269 3-hydroxybutyryl-CoA 96.9 0.0054 1.2E-07 59.0 9.7 111 54-188 1-137 (314)
275 PRK09242 tropinone reductase; 96.9 0.034 7.4E-07 51.0 14.7 116 42-160 9-147 (257)
276 PRK07453 protochlorophyllide o 96.9 0.01 2.2E-07 56.8 11.5 114 42-159 6-144 (322)
277 PRK08264 short chain dehydroge 96.9 0.012 2.6E-07 53.3 11.4 144 42-203 6-164 (238)
278 PRK07060 short chain dehydroge 96.9 0.01 2.2E-07 53.9 10.9 116 41-160 8-137 (245)
279 PRK12367 short chain dehydroge 96.9 0.018 4E-07 53.1 12.7 101 42-146 14-118 (245)
280 PRK12744 short chain dehydroge 96.9 0.024 5.1E-07 52.2 13.4 155 42-215 8-187 (257)
281 PRK12743 oxidoreductase; Provi 96.9 0.054 1.2E-06 49.8 15.8 114 43-160 3-140 (256)
282 PRK12747 short chain dehydroge 96.9 0.03 6.4E-07 51.3 13.9 147 42-204 4-177 (252)
283 PRK09072 short chain dehydroge 96.9 0.013 2.8E-07 54.1 11.5 114 42-160 5-139 (263)
284 PRK06196 oxidoreductase; Provi 96.9 0.016 3.5E-07 55.3 12.4 113 42-160 26-156 (315)
285 PRK05867 short chain dehydroge 96.9 0.019 4.2E-07 52.6 12.5 114 42-159 9-145 (253)
286 PRK08936 glucose-1-dehydrogena 96.9 0.028 6E-07 51.8 13.7 157 41-215 6-186 (261)
287 PRK12742 oxidoreductase; Provi 96.9 0.026 5.7E-07 50.9 13.2 147 42-204 6-165 (237)
288 PRK15461 NADH-dependent gamma- 96.9 0.0067 1.4E-07 57.8 9.6 64 43-118 2-65 (296)
289 PRK08507 prephenate dehydrogen 96.9 0.0071 1.5E-07 56.9 9.7 66 43-118 1-66 (275)
290 PRK06139 short chain dehydroge 96.8 0.022 4.7E-07 55.2 13.2 116 41-159 6-142 (330)
291 PRK08063 enoyl-(acyl carrier p 96.8 0.035 7.6E-07 50.5 14.0 115 42-160 4-141 (250)
292 TIGR03649 ergot_EASG ergot alk 96.8 0.006 1.3E-07 57.2 9.1 95 44-157 1-103 (285)
293 PRK06077 fabG 3-ketoacyl-(acyl 96.8 0.04 8.6E-07 50.2 14.4 147 42-204 6-173 (252)
294 PRK08219 short chain dehydroge 96.8 0.013 2.8E-07 52.5 10.9 75 42-121 3-82 (227)
295 PRK07454 short chain dehydroge 96.8 0.013 2.8E-07 53.3 11.0 114 42-160 6-142 (241)
296 COG0569 TrkA K+ transport syst 96.8 0.0021 4.6E-08 58.8 5.8 70 43-119 1-75 (225)
297 PRK07679 pyrroline-5-carboxyla 96.8 0.012 2.5E-07 55.6 11.0 69 42-118 3-73 (279)
298 PRK11199 tyrA bifunctional cho 96.8 0.0074 1.6E-07 59.5 10.0 53 42-118 98-150 (374)
299 PRK06928 pyrroline-5-carboxyla 96.8 0.011 2.4E-07 55.8 10.6 100 42-164 1-103 (277)
300 PLN02256 arogenate dehydrogena 96.8 0.011 2.3E-07 56.8 10.6 68 38-118 32-100 (304)
301 PF01488 Shikimate_DH: Shikima 96.8 0.005 1.1E-07 51.7 7.4 75 40-121 10-86 (135)
302 PRK06947 glucose-1-dehydrogena 96.8 0.046 1E-06 49.7 14.5 32 43-76 3-34 (248)
303 PRK06057 short chain dehydroge 96.8 0.0087 1.9E-07 55.0 9.5 35 42-78 7-41 (255)
304 PRK05884 short chain dehydroge 96.8 0.0074 1.6E-07 54.7 8.9 34 43-78 1-34 (223)
305 PRK09186 flagellin modificatio 96.8 0.028 6.1E-07 51.4 12.8 35 42-78 4-38 (256)
306 PF03949 Malic_M: Malic enzyme 96.8 0.0067 1.5E-07 56.3 8.4 107 41-167 24-151 (255)
307 PRK07074 short chain dehydroge 96.8 0.019 4.2E-07 52.6 11.7 34 43-78 3-36 (257)
308 PF02558 ApbA: Ketopantoate re 96.8 0.01 2.2E-07 50.2 9.1 118 45-189 1-125 (151)
309 PRK07023 short chain dehydroge 96.8 0.0043 9.3E-08 56.6 7.2 35 42-78 1-35 (243)
310 PRK09009 C factor cell-cell si 96.8 0.073 1.6E-06 48.1 15.3 72 43-122 1-79 (235)
311 PLN02780 ketoreductase/ oxidor 96.8 0.021 4.5E-07 55.0 12.3 116 42-160 53-193 (320)
312 PRK08251 short chain dehydroge 96.7 0.038 8.2E-07 50.3 13.5 114 43-159 3-139 (248)
313 PTZ00142 6-phosphogluconate de 96.7 0.0062 1.3E-07 61.8 8.9 97 43-162 2-104 (470)
314 PRK06200 2,3-dihydroxy-2,3-dih 96.7 0.016 3.4E-07 53.5 11.0 35 42-78 6-40 (263)
315 PRK07904 short chain dehydroge 96.7 0.025 5.5E-07 52.2 12.3 115 41-159 7-145 (253)
316 PRK06123 short chain dehydroge 96.7 0.062 1.3E-06 48.8 14.7 146 44-203 4-175 (248)
317 PRK12490 6-phosphogluconate de 96.7 0.011 2.4E-07 56.3 10.0 64 43-118 1-67 (299)
318 PRK09134 short chain dehydroge 96.7 0.019 4.1E-07 52.8 11.3 114 42-159 9-145 (258)
319 TIGR01831 fabG_rel 3-oxoacyl-( 96.7 0.031 6.8E-07 50.6 12.6 114 45-162 1-138 (239)
320 cd05312 NAD_bind_1_malic_enz N 96.7 0.014 3.1E-07 54.8 10.4 121 41-187 24-165 (279)
321 PRK06171 sorbitol-6-phosphate 96.7 0.01 2.2E-07 54.9 9.3 35 42-78 9-43 (266)
322 PRK05693 short chain dehydroge 96.7 0.024 5.1E-07 52.8 11.8 34 43-78 2-35 (274)
323 PRK12491 pyrroline-5-carboxyla 96.7 0.0088 1.9E-07 56.3 8.8 66 43-118 3-71 (272)
324 PRK07677 short chain dehydroge 96.7 0.026 5.6E-07 51.8 11.8 113 43-159 2-137 (252)
325 PRK08324 short chain dehydroge 96.7 0.022 4.8E-07 60.5 12.8 114 41-159 421-557 (681)
326 PRK08220 2,3-dihydroxybenzoate 96.7 0.024 5.3E-07 51.7 11.6 35 42-78 8-42 (252)
327 PRK08703 short chain dehydroge 96.7 0.09 2E-06 47.7 15.3 35 42-78 6-40 (239)
328 cd01078 NAD_bind_H4MPT_DH NADP 96.7 0.0077 1.7E-07 53.5 7.9 76 41-119 27-106 (194)
329 COG1091 RfbD dTDP-4-dehydrorha 96.6 0.01 2.3E-07 55.9 9.0 145 43-220 1-156 (281)
330 PRK13243 glyoxylate reductase; 96.6 0.012 2.7E-07 57.0 9.7 99 40-165 148-248 (333)
331 PRK07831 short chain dehydroge 96.6 0.13 2.8E-06 47.4 16.3 158 42-215 17-198 (262)
332 PRK06463 fabG 3-ketoacyl-(acyl 96.6 0.035 7.6E-07 51.0 12.4 114 42-160 7-138 (255)
333 PRK05872 short chain dehydroge 96.6 0.024 5.2E-07 53.6 11.6 115 41-160 8-143 (296)
334 PRK06523 short chain dehydroge 96.6 0.004 8.7E-08 57.3 6.0 36 41-78 8-43 (260)
335 PRK07062 short chain dehydroge 96.6 0.073 1.6E-06 49.1 14.5 116 42-160 8-146 (265)
336 COG1893 ApbA Ketopantoate redu 96.6 0.01 2.3E-07 56.8 9.0 120 43-190 1-126 (307)
337 PRK09599 6-phosphogluconate de 96.6 0.014 3E-07 55.7 9.9 64 43-118 1-67 (301)
338 PRK06114 short chain dehydroge 96.6 0.027 5.8E-07 51.8 11.5 116 42-160 8-145 (254)
339 PF00899 ThiF: ThiF family; I 96.6 0.0074 1.6E-07 50.5 6.9 35 42-78 2-36 (135)
340 cd05213 NAD_bind_Glutamyl_tRNA 96.6 0.02 4.3E-07 55.0 10.8 117 40-190 176-296 (311)
341 PRK05599 hypothetical protein; 96.6 0.1 2.2E-06 47.8 15.2 146 43-204 1-169 (246)
342 TIGR02685 pter_reduc_Leis pter 96.6 0.099 2.2E-06 48.4 15.2 32 44-77 3-34 (267)
343 PRK08177 short chain dehydroge 96.6 0.033 7.1E-07 50.2 11.6 34 43-78 2-35 (225)
344 PRK07775 short chain dehydroge 96.6 0.042 9.2E-07 51.2 12.7 34 43-78 11-44 (274)
345 PRK07792 fabG 3-ketoacyl-(acyl 96.6 0.028 6E-07 53.6 11.6 79 40-122 10-101 (306)
346 cd01065 NAD_bind_Shikimate_DH 96.5 0.012 2.5E-07 50.0 8.0 75 40-122 17-93 (155)
347 PRK08416 7-alpha-hydroxysteroi 96.5 0.16 3.4E-06 46.9 16.2 148 41-204 7-184 (260)
348 PRK07201 short chain dehydroge 96.5 0.038 8.3E-07 58.1 13.5 117 38-159 367-508 (657)
349 PRK06550 fabG 3-ketoacyl-(acyl 96.5 0.034 7.3E-07 50.2 11.5 107 42-159 5-126 (235)
350 TIGR02356 adenyl_thiF thiazole 96.5 0.017 3.8E-07 51.8 9.4 37 40-78 19-55 (202)
351 KOG1371 UDP-glucose 4-epimeras 96.5 0.019 4.1E-07 54.8 9.8 110 42-155 2-124 (343)
352 PRK08217 fabG 3-ketoacyl-(acyl 96.5 0.023 5.1E-07 51.6 10.5 35 42-78 5-39 (253)
353 PRK08818 prephenate dehydrogen 96.5 0.024 5.3E-07 55.7 11.0 56 42-118 4-59 (370)
354 PRK15469 ghrA bifunctional gly 96.5 0.032 7E-07 53.6 11.6 92 41-159 135-226 (312)
355 PRK05786 fabG 3-ketoacyl-(acyl 96.5 0.026 5.6E-07 51.0 10.5 34 43-78 6-39 (238)
356 KOG1205 Predicted dehydrogenas 96.5 0.09 1.9E-06 49.7 14.2 120 42-165 12-155 (282)
357 cd01487 E1_ThiF_like E1_ThiF_l 96.5 0.03 6.5E-07 49.1 10.5 33 44-78 1-33 (174)
358 PRK05708 2-dehydropantoate 2-r 96.5 0.04 8.8E-07 52.7 12.2 115 42-187 2-125 (305)
359 PRK05479 ketol-acid reductoiso 96.5 0.022 4.8E-07 55.0 10.2 68 39-118 14-81 (330)
360 PLN02503 fatty acyl-CoA reduct 96.5 0.043 9.3E-07 57.4 13.0 117 42-159 119-268 (605)
361 PTZ00431 pyrroline carboxylate 96.4 0.016 3.4E-07 54.2 8.7 61 42-118 3-65 (260)
362 PRK14194 bifunctional 5,10-met 96.4 0.02 4.3E-07 54.6 9.4 79 39-162 156-235 (301)
363 PRK12824 acetoacetyl-CoA reduc 96.4 0.036 7.9E-07 50.1 11.0 113 43-160 3-139 (245)
364 PRK07574 formate dehydrogenase 96.4 0.028 6E-07 55.6 10.8 101 40-165 190-292 (385)
365 PRK15059 tartronate semialdehy 96.4 0.014 3.1E-07 55.5 8.6 63 43-118 1-63 (292)
366 PRK07577 short chain dehydroge 96.4 0.038 8.3E-07 49.8 11.1 35 42-78 3-37 (234)
367 TIGR01829 AcAcCoA_reduct aceto 96.4 0.081 1.8E-06 47.7 13.2 113 44-160 2-137 (242)
368 PF01113 DapB_N: Dihydrodipico 96.4 0.014 3E-07 48.3 7.3 71 43-117 1-74 (124)
369 PRK12938 acetyacetyl-CoA reduc 96.4 0.049 1.1E-06 49.5 11.8 114 43-160 4-140 (246)
370 PRK07578 short chain dehydroge 96.4 0.052 1.1E-06 47.9 11.5 101 43-159 1-111 (199)
371 PRK08261 fabG 3-ketoacyl-(acyl 96.4 0.039 8.4E-07 55.5 12.0 118 41-160 209-343 (450)
372 PRK08644 thiamine biosynthesis 96.4 0.035 7.5E-07 50.4 10.3 38 39-78 25-62 (212)
373 PLN02712 arogenate dehydrogena 96.4 0.026 5.6E-07 59.8 10.8 67 39-118 49-116 (667)
374 cd00762 NAD_bind_malic_enz NAD 96.3 0.026 5.6E-07 52.4 9.3 123 41-188 24-167 (254)
375 COG0345 ProC Pyrroline-5-carbo 96.3 0.024 5.1E-07 53.2 9.2 93 42-159 1-95 (266)
376 PRK06483 dihydromonapterin red 96.3 0.082 1.8E-06 47.8 12.7 34 43-78 3-36 (236)
377 cd01483 E1_enzyme_family Super 96.3 0.041 8.9E-07 46.3 9.8 33 44-78 1-33 (143)
378 PRK06940 short chain dehydroge 96.3 0.047 1E-06 51.1 11.1 110 44-160 4-126 (275)
379 PRK06476 pyrroline-5-carboxyla 96.3 0.022 4.8E-07 52.9 8.7 68 43-118 1-69 (258)
380 PLN03139 formate dehydrogenase 96.2 0.037 8E-07 54.7 10.6 101 39-164 196-298 (386)
381 COG1712 Predicted dinucleotide 96.2 0.051 1.1E-06 49.4 10.4 95 43-162 1-96 (255)
382 PRK06953 short chain dehydroge 96.2 0.076 1.6E-06 47.7 11.9 113 43-160 2-130 (222)
383 TIGR02853 spore_dpaA dipicolin 96.2 0.022 4.7E-07 54.1 8.6 97 41-165 150-247 (287)
384 PRK06484 short chain dehydroge 96.2 0.058 1.3E-06 55.1 12.4 147 42-204 269-433 (520)
385 PRK07984 enoyl-(acyl carrier p 96.2 0.093 2E-06 48.9 12.7 158 42-215 6-187 (262)
386 cd05311 NAD_bind_2_malic_enz N 96.2 0.075 1.6E-06 48.7 11.8 100 40-163 23-132 (226)
387 PRK12475 thiamine/molybdopteri 96.2 0.033 7.3E-07 54.1 10.0 38 39-78 21-58 (338)
388 PRK08605 D-lactate dehydrogena 96.2 0.023 5.1E-07 55.1 8.8 64 41-118 145-208 (332)
389 KOG2305 3-hydroxyacyl-CoA dehy 96.2 0.0058 1.3E-07 55.4 4.2 105 43-166 4-125 (313)
390 PF02826 2-Hacid_dh_C: D-isome 96.2 0.048 1E-06 47.9 10.0 95 39-160 33-128 (178)
391 COG0287 TyrA Prephenate dehydr 96.2 0.025 5.4E-07 53.5 8.6 69 42-118 3-72 (279)
392 PRK06125 short chain dehydroge 96.2 0.25 5.5E-06 45.3 15.3 114 42-159 7-139 (259)
393 PRK08306 dipicolinate synthase 96.1 0.029 6.2E-07 53.6 9.0 68 40-118 150-218 (296)
394 PRK06079 enoyl-(acyl carrier p 96.1 0.055 1.2E-06 49.8 10.6 35 42-78 7-43 (252)
395 PRK06718 precorrin-2 dehydroge 96.1 0.042 9.2E-07 49.4 9.5 71 41-119 9-79 (202)
396 KOG2666 UDP-glucose/GDP-mannos 96.1 0.025 5.5E-07 53.7 8.1 76 42-123 1-91 (481)
397 PRK14806 bifunctional cyclohex 96.1 0.035 7.5E-07 59.5 10.4 68 43-118 4-71 (735)
398 PRK06484 short chain dehydroge 96.1 0.051 1.1E-06 55.5 11.3 35 42-78 5-39 (520)
399 PRK13304 L-aspartate dehydroge 96.1 0.037 7.9E-07 51.9 9.3 68 42-118 1-69 (265)
400 TIGR00873 gnd 6-phosphoglucona 96.1 0.038 8.2E-07 56.1 10.0 97 44-160 1-99 (467)
401 PF03435 Saccharop_dh: Sacchar 96.1 0.0056 1.2E-07 60.4 3.8 75 45-121 1-78 (386)
402 PRK07688 thiamine/molybdopteri 96.0 0.048 1E-06 53.1 10.2 37 40-78 22-58 (339)
403 PRK00048 dihydrodipicolinate r 96.0 0.25 5.4E-06 46.1 14.7 143 42-220 1-148 (257)
404 cd00757 ThiF_MoeB_HesA_family 96.0 0.042 9.1E-07 50.3 9.3 36 41-78 20-55 (228)
405 TIGR02371 ala_DH_arch alanine 96.0 0.038 8.3E-07 53.4 9.2 74 39-118 125-200 (325)
406 KOG4039 Serine/threonine kinas 96.0 0.041 8.9E-07 48.2 8.2 110 41-162 17-134 (238)
407 PLN02928 oxidoreductase family 95.9 0.038 8.2E-07 53.9 9.0 104 40-159 157-262 (347)
408 PRK13302 putative L-aspartate 95.9 0.07 1.5E-06 50.2 10.5 71 40-119 4-76 (271)
409 PF02423 OCD_Mu_crystall: Orni 95.9 0.031 6.8E-07 53.7 8.2 74 39-118 125-200 (313)
410 PRK08291 ectoine utilization p 95.9 0.052 1.1E-06 52.5 9.8 75 40-119 130-206 (330)
411 PLN02494 adenosylhomocysteinas 95.9 0.18 3.9E-06 51.0 13.7 93 41-164 253-346 (477)
412 KOG1201 Hydroxysteroid 17-beta 95.9 0.26 5.7E-06 46.6 13.9 113 41-159 37-172 (300)
413 TIGR01724 hmd_rel H2-forming N 95.9 0.081 1.8E-06 50.7 10.5 55 55-118 32-89 (341)
414 PRK08303 short chain dehydroge 95.8 0.26 5.6E-06 47.0 14.2 34 42-77 8-41 (305)
415 PRK08017 oxidoreductase; Provi 95.8 0.084 1.8E-06 48.2 10.4 33 44-78 4-36 (256)
416 TIGR02355 moeB molybdopterin s 95.8 0.062 1.3E-06 49.7 9.5 35 42-78 24-58 (240)
417 PF07993 NAD_binding_4: Male s 95.8 0.049 1.1E-06 50.2 8.9 112 47-159 1-135 (249)
418 PLN02350 phosphogluconate dehy 95.8 0.038 8.2E-07 56.4 8.6 70 40-118 4-80 (493)
419 cd00401 AdoHcyase S-adenosyl-L 95.8 0.17 3.6E-06 50.6 12.9 90 41-161 201-291 (413)
420 PLN02712 arogenate dehydrogena 95.8 0.059 1.3E-06 57.1 10.3 67 39-118 366-433 (667)
421 TIGR01035 hemA glutamyl-tRNA r 95.8 0.05 1.1E-06 54.4 9.3 104 40-166 178-284 (417)
422 PRK08618 ornithine cyclodeamin 95.8 0.055 1.2E-06 52.3 9.3 76 39-119 124-201 (325)
423 PRK06719 precorrin-2 dehydroge 95.8 0.12 2.6E-06 44.6 10.4 67 41-118 12-78 (157)
424 PRK08862 short chain dehydroge 95.8 0.33 7.2E-06 44.1 14.0 115 42-160 5-144 (227)
425 TIGR00936 ahcY adenosylhomocys 95.8 0.17 3.8E-06 50.3 12.9 92 40-161 193-284 (406)
426 PRK07340 ornithine cyclodeamin 95.8 0.051 1.1E-06 52.0 8.9 74 39-119 122-197 (304)
427 TIGR01850 argC N-acetyl-gamma- 95.8 0.061 1.3E-06 52.5 9.6 74 43-119 1-77 (346)
428 PRK07533 enoyl-(acyl carrier p 95.7 0.22 4.7E-06 46.0 12.8 35 42-78 10-46 (258)
429 PRK08223 hypothetical protein; 95.7 0.053 1.1E-06 51.4 8.7 36 41-78 26-61 (287)
430 TIGR00465 ilvC ketol-acid redu 95.7 0.075 1.6E-06 51.2 9.8 65 42-118 3-67 (314)
431 TIGR01470 cysG_Nterm siroheme 95.7 0.097 2.1E-06 47.2 10.0 70 42-119 9-78 (205)
432 PRK07041 short chain dehydroge 95.7 0.07 1.5E-06 47.9 9.2 110 46-159 1-123 (230)
433 PRK06603 enoyl-(acyl carrier p 95.7 0.31 6.7E-06 45.1 13.7 155 42-212 8-185 (260)
434 PRK05690 molybdopterin biosynt 95.7 0.11 2.3E-06 48.2 10.4 36 41-78 31-66 (245)
435 PRK06141 ornithine cyclodeamin 95.6 0.072 1.6E-06 51.2 9.5 74 39-118 122-197 (314)
436 PRK08415 enoyl-(acyl carrier p 95.6 0.51 1.1E-05 44.2 15.1 34 43-78 6-41 (274)
437 cd01485 E1-1_like Ubiquitin ac 95.6 0.097 2.1E-06 46.9 9.6 35 42-78 19-53 (198)
438 TIGR01692 HIBADH 3-hydroxyisob 95.6 0.046 1E-06 51.7 7.8 60 47-118 1-60 (288)
439 PTZ00075 Adenosylhomocysteinas 95.6 0.11 2.3E-06 52.6 10.6 91 40-161 252-343 (476)
440 TIGR02992 ectoine_eutC ectoine 95.6 0.083 1.8E-06 51.1 9.6 76 39-119 126-203 (326)
441 TIGR01500 sepiapter_red sepiap 95.6 0.24 5.3E-06 45.5 12.4 33 44-78 2-38 (256)
442 PRK03659 glutathione-regulated 95.5 0.089 1.9E-06 55.2 10.4 137 42-210 400-541 (601)
443 PRK09730 putative NAD(P)-bindi 95.5 0.23 5E-06 44.9 11.8 32 44-77 3-35 (247)
444 PRK14106 murD UDP-N-acetylmura 95.5 0.11 2.4E-06 52.2 10.5 123 42-175 5-132 (450)
445 PRK14874 aspartate-semialdehyd 95.5 0.044 9.6E-07 53.1 7.4 71 42-119 1-72 (334)
446 PLN02968 Probable N-acetyl-gam 95.4 0.033 7.2E-07 55.0 6.5 75 41-119 37-113 (381)
447 PRK06407 ornithine cyclodeamin 95.4 0.072 1.6E-06 50.9 8.6 72 42-118 117-190 (301)
448 TIGR01745 asd_gamma aspartate- 95.4 0.042 9.1E-07 53.8 7.1 71 43-119 1-73 (366)
449 PRK00045 hemA glutamyl-tRNA re 95.4 0.096 2.1E-06 52.5 9.9 105 40-166 180-287 (423)
450 PRK09496 trkA potassium transp 95.4 0.089 1.9E-06 52.8 9.7 71 43-118 1-73 (453)
451 PRK06598 aspartate-semialdehyd 95.4 0.053 1.1E-06 53.2 7.7 72 42-119 1-74 (369)
452 cd01080 NAD_bind_m-THF_DH_Cycl 95.4 0.063 1.4E-06 46.9 7.4 58 39-122 41-99 (168)
453 PRK07877 hypothetical protein; 95.4 0.059 1.3E-06 57.4 8.4 94 23-118 80-204 (722)
454 PRK05476 S-adenosyl-L-homocyst 95.4 0.15 3.3E-06 51.0 10.9 92 41-162 211-302 (425)
455 PRK07589 ornithine cyclodeamin 95.3 0.087 1.9E-06 51.4 9.0 74 39-118 126-201 (346)
456 PRK07791 short chain dehydroge 95.3 0.42 9.2E-06 44.9 13.5 34 42-77 6-39 (286)
457 PRK07411 hypothetical protein; 95.3 0.16 3.5E-06 50.4 10.9 35 42-78 38-72 (390)
458 PRK08690 enoyl-(acyl carrier p 95.3 1.5 3.2E-05 40.5 16.9 35 42-78 6-42 (261)
459 PRK06505 enoyl-(acyl carrier p 95.3 0.63 1.4E-05 43.4 14.3 150 43-212 8-184 (271)
460 PRK05671 aspartate-semialdehyd 95.2 0.048 1E-06 53.0 6.8 72 41-119 3-75 (336)
461 PRK06823 ornithine cyclodeamin 95.2 0.13 2.8E-06 49.5 9.8 74 39-118 125-200 (315)
462 cd01079 NAD_bind_m-THF_DH NAD 95.2 0.077 1.7E-06 47.3 7.5 78 39-122 59-138 (197)
463 TIGR01327 PGDH D-3-phosphoglyc 95.2 0.084 1.8E-06 54.4 9.0 65 41-118 137-201 (525)
464 PLN02383 aspartate semialdehyd 95.2 0.045 9.9E-07 53.3 6.6 71 42-119 7-78 (344)
465 cd01492 Aos1_SUMO Ubiquitin ac 95.2 0.19 4.2E-06 44.9 10.1 35 42-78 21-55 (197)
466 TIGR01289 LPOR light-dependent 95.2 0.28 6.2E-06 46.8 12.0 113 43-159 4-142 (314)
467 PRK13581 D-3-phosphoglycerate 95.2 0.082 1.8E-06 54.5 8.7 92 41-159 139-230 (526)
468 PF02882 THF_DHG_CYH_C: Tetrah 95.2 0.11 2.4E-06 45.0 8.1 58 39-121 33-90 (160)
469 PRK09424 pntA NAD(P) transhydr 95.1 0.13 2.8E-06 52.7 9.8 107 38-161 161-287 (509)
470 PF00106 adh_short: short chai 95.1 0.17 3.8E-06 42.8 9.4 115 44-162 2-137 (167)
471 PRK12859 3-ketoacyl-(acyl-carr 95.1 0.25 5.4E-06 45.4 11.1 34 41-76 5-40 (256)
472 COG0136 Asd Aspartate-semialde 95.1 0.081 1.7E-06 51.0 7.8 73 42-119 1-75 (334)
473 KOG0409 Predicted dehydrogenas 95.1 0.082 1.8E-06 50.0 7.7 68 42-121 35-102 (327)
474 COG0702 Predicted nucleoside-d 95.1 0.055 1.2E-06 49.8 6.6 72 43-121 1-74 (275)
475 smart00822 PKS_KR This enzymat 95.1 0.38 8.3E-06 40.4 11.4 112 44-159 2-135 (180)
476 TIGR03443 alpha_am_amid L-amin 95.1 0.37 8.1E-06 55.2 14.6 120 40-160 969-1110(1389)
477 PRK07370 enoyl-(acyl carrier p 95.1 0.33 7.2E-06 44.8 11.8 153 43-214 7-188 (258)
478 TIGR00518 alaDH alanine dehydr 95.1 0.079 1.7E-06 52.2 7.9 78 38-121 163-241 (370)
479 PRK08159 enoyl-(acyl carrier p 95.1 0.36 7.7E-06 45.1 12.1 158 42-215 10-190 (272)
480 PRK08594 enoyl-(acyl carrier p 95.1 0.96 2.1E-05 41.7 14.9 148 43-204 8-180 (257)
481 PRK13529 malate dehydrogenase; 95.1 0.22 4.7E-06 51.2 11.1 125 41-187 294-442 (563)
482 PRK05600 thiamine biosynthesis 95.0 0.13 2.8E-06 50.7 9.2 36 41-78 40-75 (370)
483 COG0686 Ald Alanine dehydrogen 95.0 0.072 1.6E-06 50.7 6.9 104 3-121 132-242 (371)
484 PRK01438 murD UDP-N-acetylmura 95.0 0.23 5.1E-06 50.4 11.3 124 42-175 16-146 (480)
485 PRK15116 sulfur acceptor prote 94.9 0.3 6.4E-06 45.9 10.9 36 41-78 29-64 (268)
486 PRK08762 molybdopterin biosynt 94.9 0.17 3.6E-06 49.9 9.7 35 41-77 134-168 (376)
487 PRK06199 ornithine cyclodeamin 94.9 0.14 3E-06 50.6 9.1 76 39-118 152-231 (379)
488 cd01491 Ube1_repeat1 Ubiquitin 94.9 0.23 5E-06 47.2 10.2 75 41-118 18-113 (286)
489 PLN03129 NADP-dependent malic 94.9 0.23 4.9E-06 51.3 10.8 104 41-162 320-439 (581)
490 PRK06436 glycerate dehydrogena 94.9 0.13 2.8E-06 49.2 8.6 95 41-165 121-217 (303)
491 PRK12748 3-ketoacyl-(acyl-carr 94.9 0.84 1.8E-05 41.7 13.8 34 42-77 5-40 (256)
492 COG2344 AT-rich DNA-binding pr 94.9 0.17 3.6E-06 44.8 8.4 101 38-165 80-183 (211)
493 PRK05597 molybdopterin biosynt 94.9 0.21 4.5E-06 48.9 10.1 35 42-78 28-62 (355)
494 PRK14192 bifunctional 5,10-met 94.8 0.098 2.1E-06 49.6 7.5 58 39-121 156-213 (283)
495 COG0289 DapB Dihydrodipicolina 94.8 0.22 4.7E-06 46.4 9.5 75 42-117 2-76 (266)
496 PRK11889 flhF flagellar biosyn 94.8 0.74 1.6E-05 45.8 13.7 135 41-192 240-389 (436)
497 PRK06728 aspartate-semialdehyd 94.8 0.065 1.4E-06 52.2 6.3 72 41-119 4-77 (347)
498 PF13241 NAD_binding_7: Putati 94.8 0.18 3.9E-06 40.1 7.9 63 41-118 6-68 (103)
499 PLN00203 glutamyl-tRNA reducta 94.8 0.25 5.4E-06 50.8 10.8 120 41-188 265-390 (519)
500 COG0002 ArgC Acetylglutamate s 94.7 0.073 1.6E-06 51.3 6.4 73 42-117 2-77 (349)
No 1
>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=3.6e-67 Score=498.05 Aligned_cols=309 Identities=68% Similarity=1.075 Sum_probs=280.8
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCCCC
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPR 122 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~~~ 122 (354)
|||+||||+|+||+++|+.|+.+++..||+|+|++.++|+++||+|+.....++.+..++|++++++|||+||++||.|+
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~~a~g~alDL~~~~~~~~i~~~~~~~~~y~~~~daDivvitaG~~~ 80 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIVNTPGVAADLSHINTPAKVTGYLGPEELKKALKGADVVVIPAGVPR 80 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecCccceeehHhHhCCCcceEEEecCCCchHHhcCCCCEEEEeCCCCC
Confidence 69999999899999999999999999999999998678999999998744456643233466799999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEeccchHHHHHHHHHHH
Q 018512 123 KPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEV 202 (354)
Q Consensus 123 ~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~t~ld~~r~~~~la~~ 202 (354)
++|++|.|++..|+++++++++.+++++|++|+|++|||+|++++++++++++.+++|++||||+|.||+.|+++++|++
T Consensus 81 k~g~tR~dll~~N~~i~~~i~~~i~~~~p~a~vivvtNPvDv~~~i~t~~~~~~s~~p~~rviG~~~LDs~R~~~~la~~ 160 (310)
T cd01337 81 KPGMTRDDLFNINAGIVRDLATAVAKACPKALILIISNPVNSTVPIAAEVLKKAGVYDPKRLFGVTTLDVVRANTFVAEL 160 (310)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCchhhHHHHHHHHHHHhcCCCHHHEEeeechHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999889999999999999
Q ss_pred hCCCCCCCcceEEeec-CCccccccccccCCCCCCChHHHHHHHHHHhcchhHHHhhhccCCcchhhHHHHHHHHHHHHH
Q 018512 203 LGLDPRDVDVPVVGGH-AGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACL 281 (354)
Q Consensus 203 l~v~~~~v~~~v~G~h-g~~~~vp~~s~~~v~~~~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~s~A~a~~~ii~si~ 281 (354)
+|+++++|+++||||| |+ ++||+||++.+...++++++++|.+++++++++|++.|.|||+++||+|.++++++++|+
T Consensus 161 l~v~~~~V~~~v~GeHsGd-s~vp~~S~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~~k~gkg~t~~~~a~a~~~iv~aIl 239 (310)
T cd01337 161 LGLDPAKVNVPVIGGHSGV-TILPLLSQCQPPFTFDQEEIEALTHRIQFGGDEVVKAKAGAGSATLSMAYAGARFANSLL 239 (310)
T ss_pred hCcCHHHEEEEEEecCCCC-ceecccccccccccCCHHHHHHHHHHHHHHHHHHHhCccCCCCcchhHHHHHHHHHHHHH
Confidence 9999999999999999 89 999999999875456666689999999999999999766789999999999999999999
Q ss_pred hccCCCCcEEEeeeeeccCCCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHHHHHHHhhhhh
Q 018512 282 RGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFS 352 (354)
Q Consensus 282 ~~~~~~~~v~~~~~~~g~~~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~~~~~~~~ 352 (354)
+|+++++.++++++++|+-.+++|+|+||++|++|+++++++++|+++|+++|++|++.|++.+++|++|+
T Consensus 240 ~~~~~~~~~~~~s~~~~~g~~~v~~s~P~~ig~~Gv~~i~~l~~L~~~E~~~l~~S~~~i~~~~~~g~~~~ 310 (310)
T cd01337 240 RGLKGEKGVIECAYVESDVTEAPFFATPVELGKNGVEKNLGLGKLNDYEKKLLEAALPELKKNIEKGVDFV 310 (310)
T ss_pred HhcCCCcceEEEEEEeccCCCceEEEEEEEEeCCeEEEEeCCCCCCHHHHHHHHHHHHHHHHHHhhhcccC
Confidence 88655555778887766535789999999999999999998525999999999999999999999999875
No 2
>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent. Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.
Probab=100.00 E-value=4.5e-67 Score=498.25 Aligned_cols=311 Identities=59% Similarity=0.949 Sum_probs=281.3
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCCCCC
Q 018512 44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRK 123 (354)
Q Consensus 44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~~~~ 123 (354)
||+||||+|+||+++|+.|+.+++..||+|+|++++.|+++||+|......++.+.+.++++++++|||+||+++|.+++
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~g~a~DL~~~~~~~~i~~~~~~~~~~~~~~daDivvitaG~~~~ 80 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAAGVAADLSHIPTAASVKGFSGEEGLENALKGADVVVIPAGVPRK 80 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCcEEEchhhcCCcCceEEEecCCCchHHHcCCCCEEEEeCCCCCC
Confidence 79999999999999999999999889999999988889999999976333444322223457899999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEeccchHHHHHHHHHHHh
Q 018512 124 PGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVL 203 (354)
Q Consensus 124 ~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~t~ld~~r~~~~la~~l 203 (354)
+|++|+|++..|+++++++++.|++++|++++|++|||+|++++++++++++.+|||++||||+|.||+.||++++|+++
T Consensus 81 ~g~~R~dll~~N~~I~~~i~~~i~~~~p~~iiivvsNPvDv~~~i~t~~~~~~sg~p~~rViG~g~LDsaR~r~~la~~l 160 (312)
T TIGR01772 81 PGMTRDDLFNVNAGIVKDLVAAVAESCPKAMILVITNPVNSTVPIAAEVLKKKGVYDPNKLFGVTTLDIVRANTFVAELK 160 (312)
T ss_pred CCccHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEecCchhhHHHHHHHHHHHhcCCChHHEEeeecchHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999889999999999999999998799999999999999
Q ss_pred CCCCCCCcceEEeecCCccccccccccCCCCCCChHHHHHHHHHHhcchhHHHhhhccCCcchhhHHHHHHHHHHHHHhc
Q 018512 204 GLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRG 283 (354)
Q Consensus 204 ~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~~~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~s~A~a~~~ii~si~~~ 283 (354)
|+++++|+++||||||+.+++|+||.++....++++++++|.+++++++++|++.|+|||+++||+|.++++++++|+++
T Consensus 161 ~v~~~~v~~~ViGeHg~~s~vp~~S~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~~k~gkg~t~~~ia~a~~~iv~ail~~ 240 (312)
T TIGR01772 161 GKDPMEVNVPVIGGHSGETIIPLISQCPGKVLFTEDQLEALIHRIQNAGTEVVKAKAGAGSATLSMAFAGARFVLSLVRG 240 (312)
T ss_pred CCCHHHeEEEEEEecCCCccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCccCCCChhHHHHHHHHHHHHHHHHh
Confidence 99999999999999986589999999986444666668999999999999999976678999999999999999999975
Q ss_pred cCCCCcEEEeeeeeccC-CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhcC
Q 018512 284 LRGDAGVVECAFVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK 354 (354)
Q Consensus 284 ~~~~~~v~~~~~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~~~~~~~~~~ 354 (354)
..+++.++|+++++|+| ++++|||+||+||++|+++++++++|+++|+++|++|++.|++.+++|++|++.
T Consensus 241 ~~d~~~v~~~s~~~g~yg~~~v~~s~P~~ig~~Gv~~i~~~~~L~~~E~~~l~~S~~~i~~~~~~g~~~~~~ 312 (312)
T TIGR01772 241 LKGEEGVVECAYVESDGVTEATFFATPLLLGKNGVEKRLGIGKLSSFEEKMLNGALPELKKNIKKGEEFVAS 312 (312)
T ss_pred hCCCccEEEEEEEccCCCcCceEEEEEEEEcCCeeEEEEccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 33334688988889998 789999999999999999999844899999999999999999999999999873
No 3
>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]
Probab=100.00 E-value=1.5e-65 Score=481.99 Aligned_cols=297 Identities=38% Similarity=0.584 Sum_probs=270.2
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCC--CeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG--AVVRGFLGQPQLENALTGMDLVIIPA 118 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~--~~v~~~~~~~d~~~al~~aDvVIi~a 118 (354)
+||+|||| |+||+++++.|+..++..|++|+|+++ ++|.++||.|+.+. ...+.. .+.+ +++|+|||+||++|
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~-~~~~-y~~~~~aDiVvitA 77 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKIT-GDGD-YEDLKGADIVVITA 77 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEe-cCCC-hhhhcCCCEEEEeC
Confidence 59999999 999999999998778878999999996 79999999998753 234433 2245 58899999999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe-ccchHHHHHH
Q 018512 119 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANT 197 (354)
Q Consensus 119 g~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~-t~ld~~r~~~ 197 (354)
|.||+|||+|+|++..|.++++++++++.++|||++++++|||+|++||++ ++.+|+|++||||+ |.||++||++
T Consensus 78 G~prKpGmtR~DLl~~Na~I~~~i~~~i~~~~~d~ivlVvtNPvD~~ty~~----~k~sg~p~~rvig~gt~LDsaR~~~ 153 (313)
T COG0039 78 GVPRKPGMTRLDLLEKNAKIVKDIAKAIAKYAPDAIVLVVTNPVDILTYIA----MKFSGFPKNRVIGSGTVLDSARFRT 153 (313)
T ss_pred CCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCeEEEEecCcHHHHHHHH----HHhcCCCccceecccchHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998765 89999999999999 8999999999
Q ss_pred HHHHHhCCCCCCCcceEEeecCCccccccccccCCCC----C----CChHHHHHHHHHHhcchhHHHhhhccCCcchhhH
Q 018512 198 FVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----S----FTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSM 269 (354)
Q Consensus 198 ~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~----~----~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~s~ 269 (354)
++|+++|+++++|+++|+|+||+ ++||+||++++.. . .++++++++.+++++++++|+++| |.| +.||+
T Consensus 154 ~lae~~~v~~~~V~~~ViGeHGd-t~vp~~S~a~v~G~pl~~~~~~~~~~~~~~i~~~v~~~g~eII~~k-G~~-t~~~~ 230 (313)
T COG0039 154 FLAEKLGVSPKDVHAYVIGEHGD-TMVPLWSQATVGGKPLEELLKEDTEEDLEELIERVRNAGAEIIEAK-GAG-TYYGP 230 (313)
T ss_pred HHHHHhCCChhHceeeEeccCCC-ceEEeeeeeeECCEEHHHHhhcccHhHHHHHHHHHHhhHHHHHHcc-Ccc-chhhH
Confidence 99999999999999999999999 9999999999853 1 234567899999999999999976 444 99999
Q ss_pred HHHHHHHHHHHHhccCCCCcEEEee-eeeccC-CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 018512 270 AYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQK 347 (354)
Q Consensus 270 A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~~~ 347 (354)
|.++++++++|++|++ +++|++ +++|+| ++++|+|+|+++|++|+++++++ +|+++|+++|++|++.|++.++.
T Consensus 231 A~a~a~~~~ail~d~~---~vl~~s~~l~G~yg~~dv~~gvP~~lg~~Gv~~iie~-~l~~~E~~~l~~s~~~lk~~i~~ 306 (313)
T COG0039 231 AAALARMVEAILRDEK---RVLPVSVYLDGEYGVEDVYFGVPAVLGKNGVEEILEL-LLSDDEQEKLDKSAEELKKNIEL 306 (313)
T ss_pred HHHHHHHHHHHHcCCC---ceEEEEEeecCccCcCCeEEEeeEEEcCCCcEEEecC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999985 489997 789999 89999999999999999999996 99999999999999999999999
Q ss_pred hhhhhc
Q 018512 348 GISFSK 353 (354)
Q Consensus 348 ~~~~~~ 353 (354)
+.+++.
T Consensus 307 ~~~~~~ 312 (313)
T COG0039 307 VKELVL 312 (313)
T ss_pred HHHhhc
Confidence 987764
No 4
>PLN00106 malate dehydrogenase
Probab=100.00 E-value=1.2e-63 Score=476.58 Aligned_cols=315 Identities=79% Similarity=1.208 Sum_probs=284.9
Q ss_pred hhcccCCCCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCC
Q 018512 32 AKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGM 111 (354)
Q Consensus 32 ~~~~~~~~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~a 111 (354)
..||.+++.++.||+||||+|+||+++++.|+.+++..|++|+|+++++++++||.|+.....+..+..++|++++++||
T Consensus 8 ~~~~~~~~~~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a~Dl~~~~~~~~i~~~~~~~d~~~~l~~a 87 (323)
T PLN00106 8 RACRAKGGAPGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVAADVSHINTPAQVRGFLGDDQLGDALKGA 87 (323)
T ss_pred hccccccCCCCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeEchhhhCCcCceEEEEeCCCCHHHHcCCC
Confidence 45788888888999999999999999999999999989999999988888999999987644555544566788999999
Q ss_pred cEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEeccch
Q 018512 112 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLD 191 (354)
Q Consensus 112 DvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~t~ld 191 (354)
|+||++||.++++|++|.|++..|.++++++++++++++|+++|+++|||+|.+++++++++++.+++|++|+||+|.||
T Consensus 88 DiVVitAG~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSNPvD~~~~i~t~~~~~~s~~p~~~viG~~~LD 167 (323)
T PLN00106 88 DLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIISNPVNSTVPIAAEVLKKAGVYDPKKLFGVTTLD 167 (323)
T ss_pred CEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCCCCcceEEEEecch
Confidence 99999999999999999999999999999999999999999999999999997777777788999999999999998899
Q ss_pred HHHHHHHHHHHhCCCCCCCcceEEeecCCccccccccccCCCCCCChHHHHHHHHHHhcchhHHHhhhccCCcchhhHHH
Q 018512 192 VVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAY 271 (354)
Q Consensus 192 ~~r~~~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~~~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~s~A~ 271 (354)
++||++++|+++|+++.+|+++|+||||+.++||+||++.+...++++++++|.+++++++++|++.|.|||+++||+|.
T Consensus 168 s~Rl~~~lA~~lgv~~~~V~~~ViGeHg~~s~vp~~S~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~~k~~kg~t~~~~a~ 247 (323)
T PLN00106 168 VVRANTFVAEKKGLDPADVDVPVVGGHAGITILPLLSQATPKVSFTDEEIEALTKRIQNGGTEVVEAKAGAGSATLSMAY 247 (323)
T ss_pred HHHHHHHHHHHhCCChhheEEEEEEeCCCccEeeehhcceecccCCHHHHHHHHHHHHHHHHHHHhCccCCCCchHHHHH
Confidence 99999999999999999999999999965489999999976434666678999999999999999975568999999999
Q ss_pred HHHHHHHHHHhccCCCCcEEEeeeeeccCCCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHHHHHH
Q 018512 272 AAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQ 346 (354)
Q Consensus 272 a~~~ii~si~~~~~~~~~v~~~~~~~g~~~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~~ 346 (354)
++++++++|++|+++++.++||++++++|.+++|||+||+||++|+++++++++|+++|+++|++|++.|++.++
T Consensus 248 a~~~ii~ail~~~~~~~~v~~~s~~~~~~~~~v~~s~P~~ig~~Gv~~i~~~~~L~~~E~~~l~~S~~~i~~~~~ 322 (323)
T PLN00106 248 AAARFADACLRGLNGEADVVECSYVQSEVTELPFFASKVRLGRNGVEEVLGLGPLSEYEQKGLEALKPELKASIE 322 (323)
T ss_pred HHHHHHHHHHhccCCCceEEEEEEECcccCCceEEEEEEEEcCCeeEEEcCCCCCCHHHHHHHHHHHHHHHHHhh
Confidence 999999999998765656999998777763349999999999999999999559999999999999999998875
No 5
>PTZ00325 malate dehydrogenase; Provisional
Probab=100.00 E-value=6.6e-62 Score=464.14 Aligned_cols=313 Identities=61% Similarity=0.968 Sum_probs=279.1
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512 40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 119 (354)
Q Consensus 40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag 119 (354)
.++.||+||||+|+||+++++.|+..+...+|+|+|++.+.++++||.|......+..+....+++++++|||+||+++|
T Consensus 6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a~Dl~~~~~~~~v~~~td~~~~~~~l~gaDvVVitaG 85 (321)
T PTZ00325 6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVAADLSHIDTPAKVTGYADGELWEKALRGADLVLICAG 85 (321)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCcccccchhhcCcCceEEEecCCCchHHHhCCCCEEEECCC
Confidence 34569999999899999999999988988899999995588999999997653344433222344689999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEeccchHHHHHHHH
Q 018512 120 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFV 199 (354)
Q Consensus 120 ~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~t~ld~~r~~~~l 199 (354)
.++++|++|.|++..|++++++++++|++++|+++|+++|||+|++++++.+.+++.+++|++||||++.||++||++++
T Consensus 86 ~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPvdv~~~~~~~~~~~~sg~p~~~viG~g~LDs~R~r~~l 165 (321)
T PTZ00325 86 VPRKPGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPVNSTVPIAAETLKKAGVYDPRKLFGVTTLDVVRARKFV 165 (321)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHHHhhhhhccCCChhheeechhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999886444568999999999999779999999999
Q ss_pred HHHhCCCCCCCcceEEeecCCccccccccccCCCCCCChHHHHHHHHHHhcchhHHHhhhccCCcchhhHHHHHHHHHHH
Q 018512 200 AEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADA 279 (354)
Q Consensus 200 a~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~~~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~s~A~a~~~ii~s 279 (354)
|+++|++|++|+++||||||+.++||+||.+.. ++++++++++.+++++++++|++.|.|||+|+||+|.++++++++
T Consensus 166 a~~l~v~~~~V~~~VlGeHGd~s~v~~~S~~g~--~l~~~~~~~i~~~v~~~g~~Ii~~k~~kg~t~~g~a~a~~~i~~a 243 (321)
T PTZ00325 166 AEALGMNPYDVNVPVVGGHSGVTIVPLLSQTGL--SLPEEQVEQITHRVQVGGDEVVKAKEGAGSATLSMAYAAAEWSTS 243 (321)
T ss_pred HHHhCcChhheEEEEEeecCCcccccchhccCC--CCCHHHHHHHHHHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHH
Confidence 999999999999999999998449999999943 566777999999999999999998666799999999999999999
Q ss_pred HHhccCCCCcEEEeeeeeccC-CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhcC
Q 018512 280 CLRGLRGDAGVVECAFVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK 354 (354)
Q Consensus 280 i~~~~~~~~~v~~~~~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~~~~~~~~~~ 354 (354)
|++|..+++.++++++++|+| .+++|+|+||++|++|+++++++++|+++|+++|++|++.|++.++++++|.++
T Consensus 244 il~~~~~~~~v~~~~~~~g~yg~~~v~~s~P~~ig~~Gv~~i~~~~~L~~~E~~~l~~S~~~i~~~~~~~~~~~~~ 319 (321)
T PTZ00325 244 VLKALRGDKGIVECAFVESDMRPECPFFSSPVELGKEGVERVLPIGPLNAYEEELLEAAVPDLKKNIEKGLEFARK 319 (321)
T ss_pred HHhhcCCCCCeEEEEEEecCCCCCCeEEEEEEEEcCCeeEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 998744344588888889999 689999999999999999999833999999999999999999999999998764
No 6
>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=2e-62 Score=466.43 Aligned_cols=286 Identities=27% Similarity=0.392 Sum_probs=259.5
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCC---CeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512 44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG---AVVRGFLGQPQLENALTGMDLVIIPA 118 (354)
Q Consensus 44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~---~~v~~~~~~~d~~~al~~aDvVIi~a 118 (354)
||+|||+ |+||+++|+.|+.+++.+||+|+|+++ ++|+++||.|.... ..++.. .+| +++++|||+||++|
T Consensus 1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~--~~~-y~~~~~aDivvita 76 (307)
T cd05290 1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIR--AGD-YDDCADADIIVITA 76 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEE--ECC-HHHhCCCCEEEECC
Confidence 7999999 999999999999999999999999987 78999999997532 235544 246 58899999999999
Q ss_pred CCCCCCCCC--HHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe-ccchHHHH
Q 018512 119 GVPRKPGMT--RDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRA 195 (354)
Q Consensus 119 g~~~~~g~~--r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~-t~ld~~r~ 195 (354)
|.|+++|++ |+|++..|+++++++++++.+++|++++|++|||+|++||++ ++.+|||++||||+ |.||+.||
T Consensus 77 G~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~~p~~i~ivvsNPvDv~t~~~----~k~sg~p~~rviG~gt~LDs~R~ 152 (307)
T cd05290 77 GPSIDPGNTDDRLDLAQTNAKIIREIMGNITKVTKEAVIILITNPLDIAVYIA----ATEFDYPANKVIGTGTMLDTARL 152 (307)
T ss_pred CCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCcHHHHHHHH----HHHhCcChhheecccchHHHHHH
Confidence 999999999 699999999999999999999999999999999999998764 78899999999999 99999999
Q ss_pred HHHHHHHhCCCCCCCcceEEeecCCccccccccccCCCC-C---------CChHHHHHHHHHHhcchhHHHhhhccCCcc
Q 018512 196 NTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-S---------FTQEETEYLTNRIQNGGTEVVEAKAGAGSA 265 (354)
Q Consensus 196 ~~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~-~---------~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~ 265 (354)
++++|+++|+++++|+++||||||+ +++|+||++++++ + ..+.+++++.+++++++++|++ +||++
T Consensus 153 ~~~la~~l~v~~~~V~~~ViGeHGd-s~vp~wS~~~v~g~~l~~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~---~KG~t 228 (307)
T cd05290 153 RRIVADKYGVDPKNVTGYVLGEHGS-HAFPVWSLVNIAGLPLDELEALFGKEPIDKDELLEEVVQAAYDVFN---RKGWT 228 (307)
T ss_pred HHHHHHHhCCCcccEEEEEEecCCC-ceEEeeeeeEECCEEHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHH---ccCee
Confidence 9999999999999999999999999 9999999998753 1 1222478999999999999999 57999
Q ss_pred hhhHHHHHHHHHHHHHhccCCCCcEEEee-eeeccC-CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHHH
Q 018512 266 TLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAG 343 (354)
Q Consensus 266 ~~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~ 343 (354)
+|++|.++++++++|++|.+ .++|++ +++|+| ++++|+|+||+||++|+++++++ +|+++|+++|++|++.|++
T Consensus 229 ~~~ia~a~~~ii~ail~d~~---~v~~vsv~~~G~yg~~~v~~svP~~ig~~Gv~~i~~l-~L~~~E~~~l~~s~~~i~~ 304 (307)
T cd05290 229 NAGIAKSASRLIKAILLDER---SILPVCTLLSGEYGLSDVALSLPTVIGAKGIERVLEI-PLDEWELEKLHKSAKAIRE 304 (307)
T ss_pred hHHHHHHHHHHHHHHHhCCC---eEEEEEEeeCCccCCCCEEEEEEEEEeCCCceEecCC-CCCHHHHHHHHHHHHHHHH
Confidence 99999999999999998865 488887 679999 78999999999999999999995 9999999999999999997
Q ss_pred HH
Q 018512 344 SI 345 (354)
Q Consensus 344 ~~ 345 (354)
.+
T Consensus 305 ~~ 306 (307)
T cd05290 305 TI 306 (307)
T ss_pred Hh
Confidence 65
No 7
>KOG1495 consensus Lactate dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=3.4e-62 Score=439.52 Aligned_cols=289 Identities=23% Similarity=0.356 Sum_probs=264.5
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCC---CeEEEEeCCCcHHhhhCCCcEE
Q 018512 40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG---AVVRGFLGQPQLENALTGMDLV 114 (354)
Q Consensus 40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~---~~v~~~~~~~d~~~al~~aDvV 114 (354)
.+..||+|+|+ |+||.++|..++.+++.+|++|+|.++ ++|++|||+|...+ +.+.. ..|+ .+.+|+++|
T Consensus 18 ~~~~KItVVG~-G~VGmAca~siL~k~Ladel~lvDv~~dklkGE~MDLqH~s~f~~~~~V~~---~~Dy-~~sa~S~lv 92 (332)
T KOG1495|consen 18 FKHNKITVVGV-GQVGMACAISILLKGLADELVLVDVNEDKLKGEMMDLQHGSAFLSTPNVVA---SKDY-SVSANSKLV 92 (332)
T ss_pred ccCceEEEEcc-chHHHHHHHHHHHhhhhhceEEEecCcchhhhhhhhhccccccccCCceEe---cCcc-cccCCCcEE
Confidence 33569999999 999999999999999999999999988 79999999998642 33332 3575 779999999
Q ss_pred EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe-ccchHH
Q 018512 115 IIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVV 193 (354)
Q Consensus 115 Ii~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~-t~ld~~ 193 (354)
|+|||..+++|++|++++++|+.+++.+.+++.+|.|+++++++|||+|++||++ ||.+|||.+||||. |+||+.
T Consensus 93 IiTAGarq~~gesRL~lvQrNV~ifK~iip~lv~ySpd~~llvvSNPVDilTYv~----wKLSgfP~nRViGsGcnLDsa 168 (332)
T KOG1495|consen 93 IITAGARQSEGESRLDLVQRNVDIFKAIIPALVKYSPDCILLVVSNPVDILTYVT----WKLSGFPKNRVIGSGCNLDSA 168 (332)
T ss_pred EEecCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecCchHHHHHHH----HHHcCCcccceeccCcCccHH
Confidence 9999999999999999999999999999999999999999999999999998764 99999999999999 999999
Q ss_pred HHHHHHHHHhCCCCCCCcceEEeecCCccccccccccCCCC------------CCChHHHHHHHHHHhcchhHHHhhhcc
Q 018512 194 RANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC------------SFTQEETEYLTNRIQNGGTEVVEAKAG 261 (354)
Q Consensus 194 r~~~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~------------~~~~~~~~~i~~~v~~~~~~i~~~~~~ 261 (354)
|||++++++||++|+++++|++||||| +.||.||...+.+ ..+++.|+++.++|.+.+|+|+++
T Consensus 169 RFryLi~~~Lg~~pss~hgwIiGEHGd-SsV~vWSgvniAGv~l~~l~~~~~t~~d~e~w~eihK~v~~sayevikl--- 244 (332)
T KOG1495|consen 169 RFRYLIGNRLGVHPSSCHGWIIGEHGD-SSVPVWSGVNIAGVSLKDLNPDLGTDYDPENWKEIHKQVVDSAYEVIKL--- 244 (332)
T ss_pred HHHHHHHHHhCCCcccceEEEeeccCC-ccceecccccccceEHhHhChhhcCCCCHHHHHHHHHHHHHHHHHHHHh---
Confidence 999999999999999999999999999 9999999998631 356678999999999999999995
Q ss_pred CCcchhhHHHHHHHHHHHHHhccCCCCcEEEee-eeeccC--CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHH
Q 018512 262 AGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAK 338 (354)
Q Consensus 262 kg~~~~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~--~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa 338 (354)
||+|+|++|.++++++++|+.|++. +.|++ .++|.| .+|+|||+||++|++|+..++.. +|+++|.++|++||
T Consensus 245 KGyTswaIglsva~l~~ail~n~~~---i~~Vst~~kg~~gI~~dVflSlPc~l~~~Gi~~vv~~-~Lt~~E~akL~kSa 320 (332)
T KOG1495|consen 245 KGYTSWAIGLSVADLAQAILRNLRR---IHPVSTMVKGLYGIDDDVFLSLPCLLGANGITHVVKQ-KLTDEEVAKLKKSA 320 (332)
T ss_pred cCchHHHHHHHHHHHHHHHHhCcCc---eeeeeeccccccCCCCceEEecceeecCCchhhhhcc-cCCHHHHHHHHHHH
Confidence 6999999999999999999999874 88888 579998 67999999999999999999996 99999999999999
Q ss_pred HHHHHHH
Q 018512 339 KELAGSI 345 (354)
Q Consensus 339 ~~i~~~~ 345 (354)
+.|.+..
T Consensus 321 ~tl~~~q 327 (332)
T KOG1495|consen 321 KTLLEAQ 327 (332)
T ss_pred HHHHHHH
Confidence 9998654
No 8
>PRK05086 malate dehydrogenase; Provisional
Probab=100.00 E-value=2.9e-61 Score=460.10 Aligned_cols=310 Identities=56% Similarity=0.880 Sum_probs=277.0
Q ss_pred CeEEEEcCCCchHHHHHHHHHh-CCCCcEEEEEecCC-chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCC
Q 018512 43 FKVAILGAAGGIGQPLAMLMKI-NPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV 120 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~-~~~~~ei~L~D~~~-~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~ 120 (354)
|||+||||+|.+|+++++.|.. .+...+++|+|+++ ..++++|+.|......+..+ ..++++++++|+|+||+++|.
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alDl~~~~~~~~i~~~-~~~d~~~~l~~~DiVIitaG~ 79 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGF-SGEDPTPALEGADVVLISAGV 79 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcceehhhhcCCCCceEEEe-CCCCHHHHcCCCCEEEEcCCC
Confidence 7999999999999999998865 46677999999977 56778999885322234431 235767899999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEeccchHHHHHHHHH
Q 018512 121 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVA 200 (354)
Q Consensus 121 ~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~t~ld~~r~~~~la 200 (354)
++++|++|.|++..|+++++++++.|++++|+++|+++|||+|++|+++++++++.+|+|++||||+|.||+.|+++++|
T Consensus 80 ~~~~~~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvsNP~D~~t~~~~~~~~~~sg~p~~rvig~~~Lds~R~~~~ia 159 (312)
T PRK05086 80 ARKPGMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIITNPVNTTVAIAAEVLKKAGVYDKNKLFGVTTLDVIRSETFVA 159 (312)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCchHHHHHHHHHHHHHhcCCCHHHEEeeecHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998888899999999999998899999999999
Q ss_pred HHhCCCCCCCcceEEeecCCccccccccccCCCCCCChHHHHHHHHHHhcchhHHHhhhccCCcchhhHHHHHHHHHHHH
Q 018512 201 EVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADAC 280 (354)
Q Consensus 201 ~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~~~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~s~A~a~~~ii~si 280 (354)
+++|+++++|+++||||||+.++||+||++ -+.++++++++++.+++++++++|++.|.|+|+++||+|.++++++++|
T Consensus 160 ~~l~~~~~~v~~~v~GeHg~~s~~p~~S~~-~g~~l~~~~~~~i~~~v~~~g~~ii~~k~~~g~t~~~~a~a~~~~v~ai 238 (312)
T PRK05086 160 ELKGKQPGEVEVPVIGGHSGVTILPLLSQV-PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSL 238 (312)
T ss_pred HHhCCChhheEEEEEEecCCCceecccccc-CCccCCHHHHHHHHHHHHHHHHHHHhcccCCCCchhhHHHHHHHHHHHH
Confidence 999999999999999999665899999999 3336777779999999999999999976677999999999999999999
Q ss_pred HhccCCCCcEEEeeeeeccCCCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhcC
Q 018512 281 LRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK 354 (354)
Q Consensus 281 ~~~~~~~~~v~~~~~~~g~~~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~~~~~~~~~~ 354 (354)
++++++++.++|+++++|+-.+++|||+||+||++|+++++++++|+++|+++|++|++.|++.+++|++|+++
T Consensus 239 ~~~~~~~~~v~~~~~~~~~g~~~v~~s~P~~ig~~Gv~~i~~~~~L~~~E~~~l~~s~~~i~~~~~~g~~~~~~ 312 (312)
T PRK05086 239 VRALQGEQGVVECAYVEGDGKYARFFAQPVLLGKNGVEERLPIGTLSAFEQNALEGMLDTLKKDIALGEEFVNK 312 (312)
T ss_pred HhcCCCCCcEEEEEEEeccCCcceEEEEEEEEcCCeeEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 98865555699988777653468999999999999999999955999999999999999999999999999975
No 9
>PLN02602 lactate dehydrogenase
Probab=100.00 E-value=1.4e-61 Score=467.01 Aligned_cols=311 Identities=23% Similarity=0.339 Sum_probs=272.4
Q ss_pred ccchhhhhhhhccc-CCCCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCC-CCeEEEE
Q 018512 23 LQENSCLRQAKCRA-KGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT-GAVVRGF 98 (354)
Q Consensus 23 ~~~~~~~~~~~~~~-~~~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~-~~~v~~~ 98 (354)
+++..++++...+. -...+.+||+|||+ |+||+++++.|+..++..||+|+|+++ ++|+++||+|+.. ....+..
T Consensus 17 ~~~~~~~~~~~~~~~m~~~~~~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i~ 95 (350)
T PLN02602 17 LSQAFFKPIHNSSPPSPTRRHTKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKIL 95 (350)
T ss_pred hhhhhhhcccccccccccCCCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEEE
Confidence 57777776665554 21122269999998 999999999999999999999999987 7899999999863 2223332
Q ss_pred eCCCcHHhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCC
Q 018512 99 LGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGT 178 (354)
Q Consensus 99 ~~~~d~~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~ 178 (354)
.++|+ ++++|||+||++||.++++|++|.|++.+|++++++++++|+++||++|+|++|||+|++|+++ ++.+|
T Consensus 96 -~~~dy-~~~~daDiVVitAG~~~k~g~tR~dll~~N~~I~~~i~~~I~~~~p~~ivivvtNPvdv~t~~~----~k~sg 169 (350)
T PLN02602 96 -ASTDY-AVTAGSDLCIVTAGARQIPGESRLNLLQRNVALFRKIIPELAKYSPDTILLIVSNPVDVLTYVA----WKLSG 169 (350)
T ss_pred -eCCCH-HHhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCchHHHHHHH----HHHhC
Confidence 23465 6699999999999999999999999999999999999999999999999999999999998764 78889
Q ss_pred CCCCCEEEe-ccchHHHHHHHHHHHhCCCCCCCcceEEeecCCccccccccccCCCC------------CCChHHHHHHH
Q 018512 179 YDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC------------SFTQEETEYLT 245 (354)
Q Consensus 179 ~p~~kviG~-t~ld~~r~~~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~------------~~~~~~~~~i~ 245 (354)
||++||||+ |.||+.|+++++|+++|+++++|+++||||||+ +++|+||.+++.+ .+++++++++.
T Consensus 170 ~p~~rviG~gt~LDs~R~r~~lA~~l~v~~~~V~~~ViGeHGd-s~vp~wS~~~i~G~pl~~~~~~~~~~~~~~~~~~i~ 248 (350)
T PLN02602 170 FPANRVIGSGTNLDSSRFRFLIADHLDVNAQDVQAYIVGEHGD-SSVALWSSVSVGGVPVLSFLEKQQIAYEKETLEEIH 248 (350)
T ss_pred CCHHHEEeecchHHHHHHHHHHHHHhCCCccceeeeEEecCCC-ceEeeeeeeeECCEEHHHHhhccCCccCHHHHHHHH
Confidence 999999999 699999999999999999999999999999999 9999999998732 13344578999
Q ss_pred HHHhcchhHHHhhhccCCcchhhHHHHHHHHHHHHHhccCCCCcEEEee-eeeccC-C--CccEEEEeEEEcCCCeEEec
Q 018512 246 NRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-T--ELPFFASKVRLGRQGAEEIF 321 (354)
Q Consensus 246 ~~v~~~~~~i~~~~~~kg~~~~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~-~--~~~~~svPv~ig~~Gv~~i~ 321 (354)
+++++++++|++ +||+|+|++|.++++++++|++|.+ .++|++ +++|+| . +++|+|+||+||++|+++++
T Consensus 249 ~~v~~~g~eIi~---~KG~t~~gia~a~a~ii~ail~d~~---~v~~vsv~~~g~Yg~~~~~v~~s~P~~ig~~Gi~~i~ 322 (350)
T PLN02602 249 RAVVDSAYEVIK---LKGYTSWAIGYSVASLVRSLLRDQR---RIHPVSVLAKGFHGIDEGDVFLSLPAQLGRNGVLGVV 322 (350)
T ss_pred HHHHHHHHHHHh---cCCccHHHHHHHHHHHHHHHHhcCC---CeEEEEEecccccCCCCCCcEEEEEEEEeCCeeEEEe
Confidence 999999999999 5799999999999999999999986 489998 579998 3 79999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 018512 322 QLGPLNEYERIGLEKAKKELAGSIQKG 348 (354)
Q Consensus 322 ~~~~L~~~E~~~l~~sa~~i~~~~~~~ 348 (354)
++ +|+++|+++|++|++.|++.++..
T Consensus 323 ~l-~L~~~E~~~l~~sa~~l~~~~~~~ 348 (350)
T PLN02602 323 NV-HLTDEEAERLRKSAKTLWEVQSQL 348 (350)
T ss_pred cC-CCCHHHHHHHHHHHHHHHHHHHHh
Confidence 95 999999999999999999887754
No 10
>TIGR01759 MalateDH-SF1 malate dehydrogenase. This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.
Probab=100.00 E-value=1.1e-61 Score=463.73 Aligned_cols=296 Identities=27% Similarity=0.377 Sum_probs=262.4
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCCc-----EEEEEecCC----chhHHHHHhcCCC-C-CeEEEEeCCCcHHhhhC
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPLVS-----VLHLYDVVN----TPGVTADISHMDT-G-AVVRGFLGQPQLENALT 109 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~-----ei~L~D~~~----~~g~~~dl~~~~~-~-~~v~~~~~~~d~~~al~ 109 (354)
+|.||+||||+|+||+++++.|+..++++ ||+|+|+++ ++|+++||+|+.. . ..++.. +++ +++++
T Consensus 2 ~p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~--~~~-~~~~~ 78 (323)
T TIGR01759 2 KPVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVAT--TDP-EEAFK 78 (323)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEEe--cCh-HHHhC
Confidence 57899999988999999999999999988 999999954 6899999999863 1 223322 334 68999
Q ss_pred CCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCC-CeEEEEecCCCCCchHHHHHHHHHhC-CCCCCCEEEe
Q 018512 110 GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNSTVPIAAEVFKKAG-TYDPKKLLGV 187 (354)
Q Consensus 110 ~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p-~a~viv~tNPv~~~~~~~~~~~~~~~-~~p~~kviG~ 187 (354)
|||+||++||.++++|++|.|++..|++++++++++|.+++| ++++|++|||+|++||++ ++.+ |||++||||+
T Consensus 79 daDvVVitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNPvDv~t~v~----~k~s~g~p~~rViG~ 154 (323)
T TIGR01759 79 DVDAALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVGNPANTNALIA----SKNAPDIPPKNFSAM 154 (323)
T ss_pred CCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCcHHHHHHHH----HHHcCCCCHHHEEEe
Confidence 999999999999999999999999999999999999999998 999999999999998765 7888 9999999999
Q ss_pred ccchHHHHHHHHHHHhCCCCCCCc-ceEEeecCCccccccccccCCCC----C-CChHH--HHHHHHHHhcchhHHHhhh
Q 018512 188 TMLDVVRANTFVAEVLGLDPRDVD-VPVVGGHAGVTILPLLSQVKPPC----S-FTQEE--TEYLTNRIQNGGTEVVEAK 259 (354)
Q Consensus 188 t~ld~~r~~~~la~~l~v~~~~v~-~~v~G~hg~~~~vp~~s~~~v~~----~-~~~~~--~~~i~~~v~~~~~~i~~~~ 259 (354)
|.||+.||++++|+++|++|++|+ .+||||||+ +++|+||++++.+ . ++++. +++|.+++++++++|++
T Consensus 155 t~LDs~R~r~~la~~l~v~~~~V~~~~V~GeHG~-s~v~~~S~~~v~g~pl~~~~~~~~~~~~~i~~~v~~~g~~Ii~-- 231 (323)
T TIGR01759 155 TRLDHNRAKYQLAAKAGVPVSDVKNVIIWGNHSN-TQVPDFTHATVDGRPVKEVIKDDKWLEGEFIPTVQQRGAAVIE-- 231 (323)
T ss_pred eHHHHHHHHHHHHHHhCcChHHeEEeEEEecCCC-ceeeccccCEECCccHHHHhcchhhHHHHHHHHHHhhHHHHHh--
Confidence 999999999999999999999995 679999999 9999999998753 1 33333 67899999999999999
Q ss_pred ccCCcchh-hHHHHHHHHHHHHHhccCCCCcEEEee-eeec-cC--CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHH
Q 018512 260 AGAGSATL-SMAYAAVKFADACLRGLRGDAGVVECA-FVAS-QV--TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGL 334 (354)
Q Consensus 260 ~~kg~~~~-s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g-~~--~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l 334 (354)
+||+++| ++|.++++++++|++|++.. .++|++ +++| +| |+++|||+||++|++|++++++.++|+++|+++|
T Consensus 232 -~kG~t~~~~~a~a~~~iv~ail~~~~~~-~v~~~s~~~~g~~Yg~~~~v~~s~P~~lg~~Gv~~iv~~l~L~~~E~~~l 309 (323)
T TIGR01759 232 -ARGASSAASAANAAIDHVRDWVTGTPEG-DWVSMGVYSDGNPYGIPEGIIFSFPVTCKGDGEWEIVEGLPLDDFVRGKL 309 (323)
T ss_pred -ccCCcchHHHHHHHHHHHHHHHcCCCCC-cEEEEEEEeCCcccCCCCCeEEEEEEEEcCCeeEEEcCCCCCCHHHHHHH
Confidence 5689999 57799999999999997322 499998 7899 88 4899999999999999999998339999999999
Q ss_pred HHHHHHHHHHHHHh
Q 018512 335 EKAKKELAGSIQKG 348 (354)
Q Consensus 335 ~~sa~~i~~~~~~~ 348 (354)
++|++.|+++++++
T Consensus 310 ~~sa~~lk~~~~~~ 323 (323)
T TIGR01759 310 DATEDELLEEKEEA 323 (323)
T ss_pred HHHHHHHHHHHhcC
Confidence 99999999998764
No 11
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=2e-61 Score=460.79 Aligned_cols=290 Identities=24% Similarity=0.337 Sum_probs=261.0
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCC-eEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGA-VVRGFLGQPQLENALTGMDLVIIPA 118 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~-~v~~~~~~~d~~~al~~aDvVIi~a 118 (354)
.+||+|||| |+||+++++.|+..++..||+|+|+++ +.|+++||+|+.... .... ..++|+ ++++|||+||+++
T Consensus 3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v-~~~~dy-~~~~~adivvita 79 (312)
T cd05293 3 RNKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKI-EADKDY-SVTANSKVVIVTA 79 (312)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEE-EECCCH-HHhCCCCEEEECC
Confidence 469999998 999999999999999999999999987 789999999986322 1222 224575 5699999999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe-ccchHHHHHH
Q 018512 119 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANT 197 (354)
Q Consensus 119 g~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~-t~ld~~r~~~ 197 (354)
|.++++|++|.|++.+|+++++++++.|++++|++|+|++|||+|+++++ +++++|+|++||||+ |.||+.|+++
T Consensus 80 G~~~k~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvsNP~d~~t~~----~~k~sg~p~~~viG~gt~Ld~~R~~~ 155 (312)
T cd05293 80 GARQNEGESRLDLVQRNVDIFKGIIPKLVKYSPNAILLVVSNPVDIMTYV----AWKLSGLPKHRVIGSGCNLDSARFRY 155 (312)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEccChHHHHHHH----HHHHhCCCHHHEEecCchHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999765 478899999999999 9999999999
Q ss_pred HHHHHhCCCCCCCcceEEeecCCccccccccccCCCC------------CCChHHHHHHHHHHhcchhHHHhhhccCCcc
Q 018512 198 FVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC------------SFTQEETEYLTNRIQNGGTEVVEAKAGAGSA 265 (354)
Q Consensus 198 ~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~------------~~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~ 265 (354)
++|+++|+++++|+++||||||+ +++|+||++++.+ ..++++++++.+++++++++|++ +||++
T Consensus 156 ~la~~l~v~~~~v~~~v~GeHG~-s~vp~~S~~~i~g~~l~~~~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~---~kg~t 231 (312)
T cd05293 156 LIAERLGVAPSSVHGWIIGEHGD-SSVPVWSGVNVAGVRLQDLNPDIGTDKDPEKWKEVHKQVVDSAYEVIK---LKGYT 231 (312)
T ss_pred HHHHHhCCChhhEEEEEeecCCC-CccccceeceECCEEHHHHhhhccccccHHHHHHHHHHHHHHHHHHHH---hcCCc
Confidence 99999999999999999999999 9999999998753 11234588999999999999999 57899
Q ss_pred hhhHHHHHHHHHHHHHhccCCCCcEEEee-eeeccC--CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHH
Q 018512 266 TLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELA 342 (354)
Q Consensus 266 ~~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~--~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~ 342 (354)
+|++|.++++++++|++|.+ .++|++ +++|.| +++++||+||+||++|+++++++ +|+++|+++|++|++.|+
T Consensus 232 ~~~~a~a~~~ii~ail~d~~---~~~~vsv~~~g~yg~~~d~~~svP~~ig~~Gi~~i~~l-~L~~~E~~~l~~s~~~i~ 307 (312)
T cd05293 232 SWAIGLSVADLVDAILRNTG---RVHSVSTLVKGLHGIEDEVFLSLPCILGENGITHVIKQ-PLTEEEQEKLQKSADTLW 307 (312)
T ss_pred hHHHHHHHHHHHHHHHcCCC---eEEEEEEEeCCccCCCCCeEEEEeEEEeCCceEEEecC-CCCHHHHHHHHHHHHHHH
Confidence 99999999999999999875 488887 678988 58999999999999999999995 999999999999999999
Q ss_pred HHHH
Q 018512 343 GSIQ 346 (354)
Q Consensus 343 ~~~~ 346 (354)
+.++
T Consensus 308 ~~~~ 311 (312)
T cd05293 308 EVQK 311 (312)
T ss_pred HHhh
Confidence 8764
No 12
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=100.00 E-value=6.4e-60 Score=451.45 Aligned_cols=292 Identities=24% Similarity=0.391 Sum_probs=264.4
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCC-CeEEEEeCCCcHHhhhCCCcEEEEc
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG-AVVRGFLGQPQLENALTGMDLVIIP 117 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~-~~v~~~~~~~d~~~al~~aDvVIi~ 117 (354)
.++||+|||| |.||+++++.|+..++.+||+|+|+++ ++|+++||.|+... ..+... +++ +++++|||+||++
T Consensus 5 ~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~--~~~-~~~~~~adivIit 80 (315)
T PRK00066 5 QHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIY--AGD-YSDCKDADLVVIT 80 (315)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEE--eCC-HHHhCCCCEEEEe
Confidence 4469999999 999999999999999999999999987 68999999998632 234443 345 4789999999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe-ccchHHHHH
Q 018512 118 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRAN 196 (354)
Q Consensus 118 ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~-t~ld~~r~~ 196 (354)
||.|+++|++|.|++..|+++++++++.+++++|++|+|++|||+|++++++ ++.+|+|++||||+ |.||+.|++
T Consensus 81 ag~~~k~g~~R~dll~~N~~i~~~i~~~i~~~~~~~~vivvsNP~d~~~~~~----~k~sg~p~~~viG~gt~LDs~R~~ 156 (315)
T PRK00066 81 AGAPQKPGETRLDLVEKNLKIFKSIVGEVMASGFDGIFLVASNPVDILTYAT----WKLSGFPKERVIGSGTSLDSARFR 156 (315)
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCcHHHHHHHH----HHHhCCCHHHEeecCchHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998754 67789999999999 799999999
Q ss_pred HHHHHHhCCCCCCCcceEEeecCCccccccccccCCCC-----------CCChHHHHHHHHHHhcchhHHHhhhccCCcc
Q 018512 197 TFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-----------SFTQEETEYLTNRIQNGGTEVVEAKAGAGSA 265 (354)
Q Consensus 197 ~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~-----------~~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~ 265 (354)
+++|+++|+++++|+++||||||+ +++|+||++++++ .+++++++++.++++++++++++ +||++
T Consensus 157 ~~la~~l~v~~~~V~~~viGeHG~-s~v~~~S~~~v~g~~l~~~~~~~~~~~~~~~~~i~~~v~~~g~~ii~---~kg~t 232 (315)
T PRK00066 157 YMLSEKLDVDPRSVHAYIIGEHGD-TEFPVWSHANVAGVPLEEYLEENEQYDEEDLDEIFENVRDAAYEIIE---KKGAT 232 (315)
T ss_pred HHHHHHhCCCcccEEEEEEecCCC-cceecceeceECCEEHHHHhhhccCcCHHHHHHHHHHHHHHHHHHHh---cCCee
Confidence 999999999999999999999999 9999999998743 13446688999999999999999 56899
Q ss_pred hhhHHHHHHHHHHHHHhccCCCCcEEEee-eeeccC-CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHHH
Q 018512 266 TLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAG 343 (354)
Q Consensus 266 ~~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~ 343 (354)
+|++|.++++++++|+++.+ .++|++ +++|+| ++++|||+||++|++|+++++++ +|+++|+++|++|+++|++
T Consensus 233 ~~~~a~~~~~i~~ail~~~~---~v~~~sv~~~g~yg~~~v~~S~Pv~ig~~Gv~~i~~l-~L~~~E~~~L~~s~~~l~~ 308 (315)
T PRK00066 233 YYGIAMALARITKAILNNEN---AVLPVSAYLEGQYGEEDVYIGVPAVVNRNGIREIVEL-PLNDDEKQKFAHSADVLKE 308 (315)
T ss_pred hHHHHHHHHHHHHHHHcCCC---eEEEEEEEeccccCCCCEEEEeEEEEeCCcEEEEcCC-CCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999865 488998 679999 78999999999999999999995 9999999999999999999
Q ss_pred HHHHh
Q 018512 344 SIQKG 348 (354)
Q Consensus 344 ~~~~~ 348 (354)
.++..
T Consensus 309 ~~~~~ 313 (315)
T PRK00066 309 IMDEA 313 (315)
T ss_pred HHHHh
Confidence 98764
No 13
>TIGR01771 L-LDH-NAD L-lactate dehydrogenase. This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.
Probab=100.00 E-value=2.5e-60 Score=450.96 Aligned_cols=281 Identities=24% Similarity=0.419 Sum_probs=254.0
Q ss_pred EEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCC--CeEEEEeCCCcHHhhhCCCcEEEEcCCCCC
Q 018512 47 ILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG--AVVRGFLGQPQLENALTGMDLVIIPAGVPR 122 (354)
Q Consensus 47 IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~--~~v~~~~~~~d~~~al~~aDvVIi~ag~~~ 122 (354)
|||+ |+||+++++.|+..++.+||+|+|+++ ++|+++||+|+... ..++.. .++ +++++|||+||++||.|+
T Consensus 1 iIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~--~~~-~~~~~daDivVitag~~r 76 (299)
T TIGR01771 1 IIGA-GNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIR--SGD-YSDCKDADLVVITAGAPQ 76 (299)
T ss_pred CCCc-CHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEe--cCC-HHHHCCCCEEEECCCCCC
Confidence 6898 999999999999999999999999987 79999999998642 223432 345 588999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe-ccchHHHHHHHHHH
Q 018512 123 KPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAE 201 (354)
Q Consensus 123 ~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~-t~ld~~r~~~~la~ 201 (354)
++||+|.|++..|+++++++++++++++|++++|++|||+|++|++ +++.+++|++||||+ |.||+.|+++++|+
T Consensus 77 k~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvsNP~d~~t~~----~~~~sg~p~~~viG~gt~LDs~R~~~~la~ 152 (299)
T TIGR01771 77 KPGETRLELVGRNVRIMKSIVPEVVKSGFDGIFLVATNPVDILTYV----AWKLSGFPKNRVIGSGTVLDTARLRYLLAE 152 (299)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHH----HHHHhCCCHHHEEeccchHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999865 478889999999999 89999999999999
Q ss_pred HhCCCCCCCcceEEeecCCccccccccccCCCC-C---C-------ChHHHHHHHHHHhcchhHHHhhhccCCcchhhHH
Q 018512 202 VLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-S---F-------TQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMA 270 (354)
Q Consensus 202 ~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~-~---~-------~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~s~A 270 (354)
++|+++++|+++|||+||+ +++|+||++++.+ + + .+.+++++.+++++++++|++ +||+++|++|
T Consensus 153 ~l~v~~~~V~~~v~GeHG~-s~vp~~S~~~v~g~pl~~~~~~~~~~~~~~~~~i~~~v~~~g~~ii~---~kG~t~~~~a 228 (299)
T TIGR01771 153 KLGVDPQSVHAYIIGEHGD-SEVPVWSSATIGGVPLLDYLKAKGTETDLDLEEIEKEVRDAAYEIIN---RKGATYYGIG 228 (299)
T ss_pred HhCcCcCeEEEEEEecCCC-ceeeceeeeEECCEEHHHHhhhcccccHHHHHHHHHHHHHHHHHHhh---cCCeeeHHHH
Confidence 9999999999999999999 9999999998743 1 1 133467999999999999999 5789999999
Q ss_pred HHHHHHHHHHHhccCCCCcEEEee-eeeccC-CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHHH
Q 018512 271 YAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAG 343 (354)
Q Consensus 271 ~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~ 343 (354)
.++++++++|++|++ .++||+ +++|+| .+++|||+||+||++|+++++++ +|+++|+++|++|++.|++
T Consensus 229 ~a~~~~i~ail~d~~---~v~~~s~~~~g~yg~~~~~~s~P~~ig~~Gv~~i~~l-~L~~~E~~~l~~s~~~ik~ 299 (299)
T TIGR01771 229 MAVARIVEAILHDEN---RVLPVSAYLDGEYGIKDVYIGVPAVLGRNGVEEIIEL-PLSDEEKEAFQKSAETLKK 299 (299)
T ss_pred HHHHHHHHHHHcCCC---cEEEEEEEecccCCCCCEEEEEEEEEeCCeeEEEccC-CCCHHHHHHHHHHHHHHhC
Confidence 999999999999975 489997 779999 67899999999999999999995 9999999999999999974
No 14
>PRK05442 malate dehydrogenase; Provisional
Probab=100.00 E-value=6.2e-60 Score=452.15 Aligned_cols=298 Identities=22% Similarity=0.301 Sum_probs=262.4
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCCc-----EEEEEecCC----chhHHHHHhcCCC-C-CeEEEEeCCCcHHhhhC
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPLVS-----VLHLYDVVN----TPGVTADISHMDT-G-AVVRGFLGQPQLENALT 109 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~-----ei~L~D~~~----~~g~~~dl~~~~~-~-~~v~~~~~~~d~~~al~ 109 (354)
+|+||+||||+|+||+++++.|+..++++ +|+|+|+++ ++|+++||+|+.. . ..++.. +++ +++++
T Consensus 3 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~--~~~-y~~~~ 79 (326)
T PRK05442 3 APVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVIT--DDP-NVAFK 79 (326)
T ss_pred CCcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEEe--cCh-HHHhC
Confidence 46799999988999999999999988888 999999954 6899999999862 1 234332 344 68999
Q ss_pred CCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHhC-CCCCCCEEEe
Q 018512 110 GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAG-TYDPKKLLGV 187 (354)
Q Consensus 110 ~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~~-~~p~~kviG~ 187 (354)
|||+||++||.++++|++|.|++..|++++++++++|.+++ |++++|++|||+|++||++ ++.+ |||++||||+
T Consensus 80 daDiVVitaG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNPvDv~t~v~----~k~s~g~p~~rViG~ 155 (326)
T PRK05442 80 DADVALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVGNPANTNALIA----MKNAPDLPAENFTAM 155 (326)
T ss_pred CCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCCchHHHHHHH----HHHcCCCCHHHEEee
Confidence 99999999999999999999999999999999999999988 7999999999999998765 6777 9999999999
Q ss_pred ccchHHHHHHHHHHHhCCCCCCCcce-EEeecCCccccccccccCCCC----C-CChHH--HHHHHHHHhcchhHHHhhh
Q 018512 188 TMLDVVRANTFVAEVLGLDPRDVDVP-VVGGHAGVTILPLLSQVKPPC----S-FTQEE--TEYLTNRIQNGGTEVVEAK 259 (354)
Q Consensus 188 t~ld~~r~~~~la~~l~v~~~~v~~~-v~G~hg~~~~vp~~s~~~v~~----~-~~~~~--~~~i~~~v~~~~~~i~~~~ 259 (354)
|.||+.||++++|+++++++++|+++ ||||||+ +++|+||++++.. . +++.+ +++|.+++++++++|++
T Consensus 156 t~LDs~R~r~~la~~l~v~~~~V~~~vV~GeHG~-s~~~~~S~~~v~g~pl~~~~~~~~~~~~~i~~~v~~~g~~Ii~-- 232 (326)
T PRK05442 156 TRLDHNRALSQLAAKAGVPVADIKKMTVWGNHSA-TQYPDFRHATIDGKPAAEVINDQAWLEDTFIPTVQKRGAAIIE-- 232 (326)
T ss_pred eHHHHHHHHHHHHHHhCcChHHeEEeEEEECCcC-ceeeccccCEECCEEHHHHccchhhHHHHHHHHHHhhHHHHHh--
Confidence 99999999999999999999999986 5999999 9999999998853 1 34433 57899999999999999
Q ss_pred ccCCcchhhHHHH-HHHHHHHHHhccCCCCcEEEee-eeeccC--CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHH
Q 018512 260 AGAGSATLSMAYA-AVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLE 335 (354)
Q Consensus 260 ~~kg~~~~s~A~a-~~~ii~si~~~~~~~~~v~~~~-~~~g~~--~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~ 335 (354)
+||+++|++|.+ +++++++|++|.+.+ .++|++ +++|+| |+++|||+||++| +|+++++..++|+++|+++|+
T Consensus 233 -~kG~t~~~~a~~~~~~iv~ail~~~~~~-~i~~~sv~~~g~ygi~~~v~~s~P~~ig-~Gv~~iv~~l~L~~~E~~~l~ 309 (326)
T PRK05442 233 -ARGASSAASAANAAIDHVRDWVLGTPEG-DWVSMGVPSDGSYGIPEGLIFGFPVTCE-NGEYEIVQGLEIDDFSREKID 309 (326)
T ss_pred -CcCCccHHHHHHHHHHHHHHHHhCCCCC-eEEEEEEEecCccCCcCCeEEEEEEEEc-CcEEEEeCCCCCCHHHHHHHH
Confidence 578999999999 599999999995222 499998 569999 5899999999999 999999653499999999999
Q ss_pred HHHHHHHHHHHHhhhh
Q 018512 336 KAKKELAGSIQKGISF 351 (354)
Q Consensus 336 ~sa~~i~~~~~~~~~~ 351 (354)
+|+++|+++.+.+..+
T Consensus 310 ~s~~~l~~~~~~~~~~ 325 (326)
T PRK05442 310 ATLAELEEERDAVKHL 325 (326)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999887654
No 15
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=2.3e-59 Score=448.31 Aligned_cols=294 Identities=28% Similarity=0.381 Sum_probs=260.1
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCc-----EEEEEecCC----chhHHHHHhcCCC--CCeEEEEeCCCcHHhhhCCC
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVS-----VLHLYDVVN----TPGVTADISHMDT--GAVVRGFLGQPQLENALTGM 111 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~-----ei~L~D~~~----~~g~~~dl~~~~~--~~~v~~~~~~~d~~~al~~a 111 (354)
.||+||||+|+||+++++.|+..++++ +|+|+|+++ ++++++||.|+.. ....... . +.+++++||
T Consensus 1 ~KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~~~Dl~d~~~~~~~~~~i~--~-~~~~~~~~a 77 (323)
T cd00704 1 LHVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVMELQDCAFPLLKGVVIT--T-DPEEAFKDV 77 (323)
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccceeeeehhhhcccccCCcEEe--c-ChHHHhCCC
Confidence 389999999999999999999988877 599999985 6888999999852 1223321 2 346899999
Q ss_pred cEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHhCC-CCCCCEEEecc
Q 018512 112 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGT-YDPKKLLGVTM 189 (354)
Q Consensus 112 DvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~~~-~p~~kviG~t~ 189 (354)
|+||++||.|+++|++|.|++..|++++++++++|++++ |++++|++|||+|++|+++ ++.+| +|++||||+|.
T Consensus 78 DiVVitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~----~k~sg~~p~~~vig~t~ 153 (323)
T cd00704 78 DVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVGNPANTNALIA----LKNAPNLPPKNFTALTR 153 (323)
T ss_pred CEEEEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeCCcHHHHHHHH----HHHcCCCCHHHEEEeeH
Confidence 999999999999999999999999999999999999996 9999999999999998764 78889 59999999999
Q ss_pred chHHHHHHHHHHHhCCCCCCC-cceEEeecCCccccccccccCCCC-C--------CChH-HHHHHHHHHhcchhHHHhh
Q 018512 190 LDVVRANTFVAEVLGLDPRDV-DVPVVGGHAGVTILPLLSQVKPPC-S--------FTQE-ETEYLTNRIQNGGTEVVEA 258 (354)
Q Consensus 190 ld~~r~~~~la~~l~v~~~~v-~~~v~G~hg~~~~vp~~s~~~v~~-~--------~~~~-~~~~i~~~v~~~~~~i~~~ 258 (354)
||+.||++++|++++++|++| .++||||||+ +++|+||++++.. + ++++ ..++|.+++++++++|++
T Consensus 154 LDs~R~r~~la~~l~v~~~~V~~~~V~GeHG~-s~v~~~S~~~v~g~~~~~~~~~~~~~~~~~~~i~~~v~~~~~~Ii~- 231 (323)
T cd00704 154 LDHNRAKAQVARKLGVRVSDVKNVIIWGNHSN-TQVPDLSNAVVYGPGGTEWVLDLLDEEWLNDEFVKTVQKRGAAIIK- 231 (323)
T ss_pred HHHHHHHHHHHHHhCcCHHHceeeeEEecccC-ceeeccccceecCccHHHhcccccChHHHHHHHHHHHHhhHHHHHh-
Confidence 999999999999999999999 5689999999 9999999998743 1 2222 257899999999999999
Q ss_pred hccCCcchhh-HHHHHHHHHHHHHhccCCCCcEEEee-eeeccC---CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHH
Q 018512 259 KAGAGSATLS-MAYAAVKFADACLRGLRGDAGVVECA-FVASQV---TELPFFASKVRLGRQGAEEIFQLGPLNEYERIG 333 (354)
Q Consensus 259 ~~~kg~~~~s-~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~---~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~ 333 (354)
+||+++|+ +|.++++++++|++|++.+ .++||+ +++|+| |+++|||+||+||++|++++.++ +|+++|+++
T Consensus 232 --~kg~t~~~~~a~a~~~iv~ail~~~~~~-~v~~~s~~~~g~y~gi~~~v~~s~P~~ig~~Gv~~v~~l-~L~~~E~~~ 307 (323)
T cd00704 232 --KRGASSAASAAKAIADHVKDWLFGTPPG-EIVSMGVYSPGNPYGIPPGIVFSFPCTCKGGGWHVVEDL-KLNDWLREK 307 (323)
T ss_pred --ccCcchhHHHHHHHHHHHHHHHhCCCCC-cEEEEEEEeCCccCCCCCceEEEEEEEEcCCEEEEecCC-CCCHHHHHH
Confidence 46889996 6999999999999998744 499998 789988 47999999999999999999995 999999999
Q ss_pred HHHHHHHHHHHHHHhh
Q 018512 334 LEKAKKELAGSIQKGI 349 (354)
Q Consensus 334 l~~sa~~i~~~~~~~~ 349 (354)
|++|++.|+++.+.++
T Consensus 308 l~~s~~~l~~~~~~~~ 323 (323)
T cd00704 308 LKATEEELIEEKEIAL 323 (323)
T ss_pred HHHHHHHHHHHHHhhC
Confidence 9999999999988764
No 16
>PLN00112 malate dehydrogenase (NADP); Provisional
Probab=100.00 E-value=5.4e-59 Score=457.90 Aligned_cols=299 Identities=22% Similarity=0.268 Sum_probs=263.5
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhC-------CCCcEEEEEecCC--chhHHHHHhcCCC--CCeEEEEeCCCcHHhhh
Q 018512 40 AAGFKVAILGAAGGIGQPLAMLMKIN-------PLVSVLHLYDVVN--TPGVTADISHMDT--GAVVRGFLGQPQLENAL 108 (354)
Q Consensus 40 ~~~~kI~IiGa~G~vG~~~a~~l~~~-------~~~~ei~L~D~~~--~~g~~~dl~~~~~--~~~v~~~~~~~d~~~al 108 (354)
.++.||+||||+|+||+++++.|+.+ ++..||+|+|+++ ++|+++||+|+.+ ...+.. .+++ ++++
T Consensus 98 ~~~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i--~~~~-ye~~ 174 (444)
T PLN00112 98 KKLINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSI--GIDP-YEVF 174 (444)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEE--ecCC-HHHh
Confidence 44689999999999999999999998 6677999999988 7999999999863 122332 2345 5889
Q ss_pred CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhh-hCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe
Q 018512 109 TGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAK-CCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV 187 (354)
Q Consensus 109 ~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~-~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~ 187 (354)
+|||+||++||.|+++|++|.|++..|++++++++++|.+ ++|+++||++|||+|++|+++ ++.+++|++|+||+
T Consensus 175 kdaDiVVitAG~prkpG~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVsNPvDv~t~v~----~k~sg~~~~rViGt 250 (444)
T PLN00112 175 QDAEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNEVASRNVKVIVVGNPCNTNALIC----LKNAPNIPAKNFHA 250 (444)
T ss_pred CcCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcCCcHHHHHHHH----HHHcCCCCcceEEe
Confidence 9999999999999999999999999999999999999999 589999999999999998765 78889999999999
Q ss_pred -ccchHHHHHHHHHHHhCCCCCCC-cceEEeecCCccccccccccCCCC-C----CChHH--HHHHHHHHhcchhHHHhh
Q 018512 188 -TMLDVVRANTFVAEVLGLDPRDV-DVPVVGGHAGVTILPLLSQVKPPC-S----FTQEE--TEYLTNRIQNGGTEVVEA 258 (354)
Q Consensus 188 -t~ld~~r~~~~la~~l~v~~~~v-~~~v~G~hg~~~~vp~~s~~~v~~-~----~~~~~--~~~i~~~v~~~~~~i~~~ 258 (354)
|.||++||+++||+++||++++| +++||||||+ ++||+||++++++ + +++.+ +++|.+++++++++|++
T Consensus 251 gT~LDsaR~r~~LA~~l~V~~~~V~~~~V~GeHGd-sqvp~wS~a~V~G~pl~e~i~~~~~~~~ei~~~v~~~g~~Ii~- 328 (444)
T PLN00112 251 LTRLDENRAKCQLALKAGVFYDKVSNVTIWGNHST-TQVPDFLNAKINGLPVKEVITDHKWLEEEFTPKVQKRGGVLIK- 328 (444)
T ss_pred eccHHHHHHHHHHHHHhCcCHHHcccceEEecCCC-ceeeccceeEECCccHHHhhccccchHHHHHHHHHHHHHHHHh-
Confidence 89999999999999999999999 5699999999 9999999999853 2 23333 67899999999999999
Q ss_pred hccCCcchh-hHHHHHHHHHHHHHhccCCCCcEEEee-eeec-cC--CCccEEEEeEEEcCCCeEEec-cCCCCCHHHHH
Q 018512 259 KAGAGSATL-SMAYAAVKFADACLRGLRGDAGVVECA-FVAS-QV--TELPFFASKVRLGRQGAEEIF-QLGPLNEYERI 332 (354)
Q Consensus 259 ~~~kg~~~~-s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g-~~--~~~~~~svPv~ig~~Gv~~i~-~~~~L~~~E~~ 332 (354)
+||++.| ++|.++++++++|+++.+. +.++|++ +++| +| ++|++||+||++|++|+++++ ++ +|+++|++
T Consensus 329 --~kG~t~~~s~a~ai~~~I~ail~~~d~-~~vlpvsv~l~G~~YGi~~dv~~SvPvvig~~Gv~~Iv~el-~L~~~E~~ 404 (444)
T PLN00112 329 --KWGRSSAASTAVSIADAIKSLVTPTPE-GDWFSTGVYTDGNPYGIAEGLVFSMPCRSKGDGDYEIVKDV-EIDDYLRE 404 (444)
T ss_pred --ccCchhHHHHHHHHHHHHHHHHcCCCC-CeEEEEEEEeCCcccCCCCCeEEEeEEEEeCCeeEEECCCC-CCCHHHHH
Confidence 5677777 9999999999999954433 2599998 6799 58 589999999999999999999 65 99999999
Q ss_pred HHHHHHHHHHHHHHHhhhh
Q 018512 333 GLEKAKKELAGSIQKGISF 351 (354)
Q Consensus 333 ~l~~sa~~i~~~~~~~~~~ 351 (354)
+|++|+++|.++.+.+..+
T Consensus 405 ~l~~Sa~~L~~e~~~~~~~ 423 (444)
T PLN00112 405 RIKKSEAELLAEKRCVAHL 423 (444)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999887654
No 17
>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent. This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.
Probab=100.00 E-value=1e-58 Score=449.78 Aligned_cols=300 Identities=22% Similarity=0.256 Sum_probs=261.4
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHHhCCCCc-----EEEEE--ecCC--chhHHHHHhcCCC-C-CeEEEEeCCCcHHhh
Q 018512 39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVS-----VLHLY--DVVN--TPGVTADISHMDT-G-AVVRGFLGQPQLENA 107 (354)
Q Consensus 39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~-----ei~L~--D~~~--~~g~~~dl~~~~~-~-~~v~~~~~~~d~~~a 107 (354)
..++.||+||||+|+||+++|+.|+..++++ .|+|+ |+++ ++|+++||.|+.+ . ..+... +++ +++
T Consensus 41 ~~~p~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~--~~~-y~~ 117 (387)
T TIGR01757 41 WKKTVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIG--IDP-YEV 117 (387)
T ss_pred CCCCeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEe--cCC-HHH
Confidence 4457899999999999999999999999887 57777 5555 7899999999862 1 223322 345 588
Q ss_pred hCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEE
Q 018512 108 LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLG 186 (354)
Q Consensus 108 l~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG 186 (354)
++|||+||++||.|+++|++|.|++..|+++++++++.|++++ |++++|++|||+|++|+++ ++.+++|++|+||
T Consensus 118 ~kdaDIVVitAG~prkpg~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVsNPvDv~t~v~----~k~sg~~~~rviG 193 (387)
T TIGR01757 118 FEDADWALLIGAKPRGPGMERADLLDINGQIFADQGKALNAVASKNCKVLVVGNPCNTNALIA----MKNAPNIPRKNFH 193 (387)
T ss_pred hCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCcHHHHHHHH----HHHcCCCcccEEE
Confidence 9999999999999999999999999999999999999999987 9999999999999998765 7888999999999
Q ss_pred e-ccchHHHHHHHHHHHhCCCCCCC-cceEEeecCCccccccccccCCCC-C----CChHH--HHHHHHHHhcchhHHHh
Q 018512 187 V-TMLDVVRANTFVAEVLGLDPRDV-DVPVVGGHAGVTILPLLSQVKPPC-S----FTQEE--TEYLTNRIQNGGTEVVE 257 (354)
Q Consensus 187 ~-t~ld~~r~~~~la~~l~v~~~~v-~~~v~G~hg~~~~vp~~s~~~v~~-~----~~~~~--~~~i~~~v~~~~~~i~~ 257 (354)
+ |.||++||+++||+++++++++| +++||||||+ +++|+||++++.+ + +++.+ +++|.+++++++++|++
T Consensus 194 ~gT~LDsaR~r~~LA~~l~v~~~~V~~~~V~GeHGd-s~vp~~S~a~V~G~pl~~~~~~~~~~~~ei~~~v~~~g~eIi~ 272 (387)
T TIGR01757 194 ALTRLDENRAKCQLALKSGKFYTSVSNVTIWGNHST-TQVPDFVNAKIGGRPAKEVIKDTKWLEEEFTPTVQKRGGALIK 272 (387)
T ss_pred ecchhHHHHHHHHHHHHHCcChhHcceeEEEecCCC-cEEecceeeEECCEEhHHhcccccchHHHHHHHHHHHHHHHHh
Confidence 9 89999999999999999999999 5999999999 9999999998753 2 22223 68899999999999999
Q ss_pred hhccCCcchh-hHHHHHHHHHHHHHhccCCCCcEEEee-eeecc-C--CCccEEEEeEEEcCCCeEEec-cCCCCCHHHH
Q 018512 258 AKAGAGSATL-SMAYAAVKFADACLRGLRGDAGVVECA-FVASQ-V--TELPFFASKVRLGRQGAEEIF-QLGPLNEYER 331 (354)
Q Consensus 258 ~~~~kg~~~~-s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~-~--~~~~~~svPv~ig~~Gv~~i~-~~~~L~~~E~ 331 (354)
+||++.| ++|.++++++++|+++.+.+ .++|++ +++|+ | ++++|||+||++|++|+++++ ++ +|+++|+
T Consensus 273 ---~KG~t~~~s~a~ai~~~i~ai~~g~d~~-~il~vsv~~~Ge~YGi~~gv~~S~Pvvig~~Gv~~Iv~~l-~L~~~E~ 347 (387)
T TIGR01757 273 ---KWGRSSAASTAVSIADAIKSLVVPTPEG-DWFSTGVYTDGNPYGIAEGLVFSMPCRSKGDGDYELATDV-SMDDFLR 347 (387)
T ss_pred ---ccCchhHHHHHHHHHHHHHHHhcCCCCC-eEEEEEEEeCCcccCCCCCEEEEEEEEEeCCEEEEECCCC-CCCHHHH
Confidence 4677777 99999999999999554332 599998 56996 8 489999999999999999996 75 9999999
Q ss_pred HHHHHHHHHHHHHHHHhhhh
Q 018512 332 IGLEKAKKELAGSIQKGISF 351 (354)
Q Consensus 332 ~~l~~sa~~i~~~~~~~~~~ 351 (354)
++|++|++.|+++.+.+++.
T Consensus 348 ~~l~~Sa~~L~~e~~~~~~~ 367 (387)
T TIGR01757 348 ERIRKSEDELLKEKECVAHL 367 (387)
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999988764
No 18
>PTZ00117 malate dehydrogenase; Provisional
Probab=100.00 E-value=3.5e-58 Score=440.55 Aligned_cols=297 Identities=31% Similarity=0.514 Sum_probs=265.5
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCC--CeEEEEeCCCcHHhhhCCCcEEEE
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG--AVVRGFLGQPQLENALTGMDLVII 116 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~--~~v~~~~~~~d~~~al~~aDvVIi 116 (354)
+.+||+|||| |+||+++++.++..++ .+|+|+|+++ +.+.++|+.|.... ...+. ..++|+ ++++|||+||+
T Consensus 4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~-~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i-~~~~d~-~~l~~ADiVVi 79 (319)
T PTZ00117 4 KRKKISMIGA-GQIGSTVALLILQKNL-GDVVLYDVIKGVPQGKALDLKHFSTLVGSNINI-LGTNNY-EDIKDSDVVVI 79 (319)
T ss_pred CCcEEEEECC-CHHHHHHHHHHHHCCC-CeEEEEECCCccchhHHHHHhhhccccCCCeEE-EeCCCH-HHhCCCCEEEE
Confidence 3469999999 9999999999998887 5899999987 57889999997532 12333 234676 58999999999
Q ss_pred cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEec-cchHHHH
Q 018512 117 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT-MLDVVRA 195 (354)
Q Consensus 117 ~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~t-~ld~~r~ 195 (354)
++|.++++|++|.|++..|.++++++++.|+++||++|+|++|||+|+++++ +++.+++|++||+|+| .||+.|+
T Consensus 80 tag~~~~~g~~r~dll~~n~~i~~~i~~~i~~~~p~a~vivvsNP~di~t~~----~~~~s~~p~~rviG~gt~lds~R~ 155 (319)
T PTZ00117 80 TAGVQRKEEMTREDLLTINGKIMKSVAESVKKYCPNAFVICVTNPLDCMVKV----FQEKSGIPSNKICGMAGVLDSSRF 155 (319)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecChHHHHHHH----HHHhhCCCcccEEEecchHHHHHH
Confidence 9999999999999999999999999999999999999999999999999765 4788899999999995 8999999
Q ss_pred HHHHHHHhCCCCCCCcceEEeecCCccccccccccCCCC----------CCChHHHHHHHHHHhcchhHHHhhhccCCcc
Q 018512 196 NTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----------SFTQEETEYLTNRIQNGGTEVVEAKAGAGSA 265 (354)
Q Consensus 196 ~~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~----------~~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~ 265 (354)
++.+|+++|+++++|+++|+||||+ +++|+||++++++ .+.+++++++.+++++++++|++.+ |||++
T Consensus 156 ~~~la~~l~v~~~~v~~~viGeHg~-~~v~~~s~~~v~g~p~~~~~~~~~~~~~~~~~i~~~v~~~g~~ii~~~-~kg~t 233 (319)
T PTZ00117 156 RCNLAEKLGVSPGDVSAVVIGGHGD-LMVPLPRYCTVNGIPLSDFVKKGAITEKEINEIIKKTRNMGGEIVKLL-KKGSA 233 (319)
T ss_pred HHHHHHHhCCCcccceEEEeecCCC-cEEeceeeceECCEEHHHHhhccccCHHHHHHHHHHHHHHHHHHHhhc-CCCCh
Confidence 9999999999999999999999999 9999999998742 2456668899999999999999975 78999
Q ss_pred hhhHHHHHHHHHHHHHhccCCCCcEEEee-eeeccC-CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHHH
Q 018512 266 TLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAG 343 (354)
Q Consensus 266 ~~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~ 343 (354)
+||+|.++++++++|++|.+ .++|++ +++|+| .+++|||+||+||++|+++++++ +|+++|+++|++|++.|++
T Consensus 234 ~~~~a~a~~~~~~ail~~~~---~v~~~s~~~~g~yg~~~~~~s~P~~ig~~Gv~~i~~l-~l~~~E~~~l~~s~~~l~~ 309 (319)
T PTZ00117 234 FFAPAAAIVAMIEAYLKDEK---RVLVCSVYLNGQYNCKNLFVGVPVVIGGKGIEKVIEL-ELNAEEKELFDKSIESIQE 309 (319)
T ss_pred HHHHHHHHHHHHHHHhcCCC---eEEEEEEEeccccCCCCeEEEEEEEEeCCeEEEEeCC-CCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999875 499998 679999 46999999999999999999995 9999999999999999999
Q ss_pred HHHHhhhh
Q 018512 344 SIQKGISF 351 (354)
Q Consensus 344 ~~~~~~~~ 351 (354)
.++....+
T Consensus 310 ~~~~~~~~ 317 (319)
T PTZ00117 310 LTQKAKAL 317 (319)
T ss_pred HHHHHHHh
Confidence 99877654
No 19
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=100.00 E-value=1.3e-58 Score=441.80 Aligned_cols=288 Identities=25% Similarity=0.399 Sum_probs=258.9
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCC--CCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT--GAVVRGFLGQPQLENALTGMDLVIIPA 118 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~--~~~v~~~~~~~d~~~al~~aDvVIi~a 118 (354)
+||+|||+ |.+|+++++.|+..++..+|+|+|+++ +++.++||.|+.. ....... ..++ +++++||+||+++
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~--~~~~-~~l~~aDIVIita 76 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIK--AGDY-SDCKDADIVVITA 76 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEE--cCCH-HHhCCCCEEEEcc
Confidence 38999998 999999999999999878999999987 6788999998753 1223332 2454 6799999999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe-ccchHHHHHH
Q 018512 119 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANT 197 (354)
Q Consensus 119 g~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~-t~ld~~r~~~ 197 (354)
|.|+++|++|.|++.+|+++++++++.|++++|++++|++|||+|++|+++ +++++||++||||+ |.||+.|+++
T Consensus 77 g~~~~~g~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivvsNP~d~~~~~~----~~~~g~p~~~v~g~gt~LDs~R~~~ 152 (306)
T cd05291 77 GAPQKPGETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVASNPVDVITYVV----QKLSGLPKNRVIGTGTSLDTARLRR 152 (306)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecChHHHHHHHH----HHHhCcCHHHEeeccchHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998654 77899999999999 7999999999
Q ss_pred HHHHHhCCCCCCCcceEEeecCCccccccccccCCCC----------CCChHHHHHHHHHHhcchhHHHhhhccCCcchh
Q 018512 198 FVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----------SFTQEETEYLTNRIQNGGTEVVEAKAGAGSATL 267 (354)
Q Consensus 198 ~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~----------~~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~ 267 (354)
++|+++|+++++|+++|||+||+ +++|+||++++.+ .+.+++++++.+++++++++|++ +||+++|
T Consensus 153 ~la~~l~v~~~~v~~~V~G~Hg~-s~~~~~S~~~v~g~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~ii~---~kg~t~~ 228 (306)
T cd05291 153 ALAEKLNVDPRSVHAYVLGEHGD-SQFVAWSTVTVGGKPLLDLLKEGKLSELDLDEIEEDVRKAGYEIIN---GKGATYY 228 (306)
T ss_pred HHHHHHCCCcccceEEEEecCCC-ceeecceeeEEcCEEHHHHhhccccChHHHHHHHHHHHHHHHHHHH---ccCccHH
Confidence 99999999999999999999999 9999999998743 13345688999999999999999 5799999
Q ss_pred hHHHHHHHHHHHHHhccCCCCcEEEee-eeeccC-CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHHHHH
Q 018512 268 SMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSI 345 (354)
Q Consensus 268 s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~ 345 (354)
++|.++++++++|+++.+ .++|++ +++|+| ++++|||+||+||++|+++++++ +|+++|+++|++|+++|++.+
T Consensus 229 ~~a~a~~~~~~ail~~~~---~v~~~s~~~~g~yg~~~v~~s~P~~ig~~Gv~~i~~~-~l~~~E~~~l~~s~~~l~~~~ 304 (306)
T cd05291 229 GIATALARIVKAILNDEN---AILPVSAYLDGEYGEKDVYIGVPAIIGRNGVEEVIEL-DLTEEEQEKFEKSADIIKENI 304 (306)
T ss_pred HHHHHHHHHHHHHHcCCC---EEEEEEEEeccccCCCCEEEEEEEEEeCCCEEEEECC-CCCHHHHHHHHHHHHHHHHHh
Confidence 999999999999999865 488998 679999 78999999999999999999995 999999999999999999876
Q ss_pred H
Q 018512 346 Q 346 (354)
Q Consensus 346 ~ 346 (354)
+
T Consensus 305 ~ 305 (306)
T cd05291 305 K 305 (306)
T ss_pred h
Confidence 5
No 20
>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=2.1e-58 Score=441.43 Aligned_cols=295 Identities=22% Similarity=0.306 Sum_probs=262.4
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCCc-----EEEEEecCC----chhHHHHHhcCCC--CCeEEEEeCCCcHHhhhC
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPLVS-----VLHLYDVVN----TPGVTADISHMDT--GAVVRGFLGQPQLENALT 109 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~-----ei~L~D~~~----~~g~~~dl~~~~~--~~~v~~~~~~~d~~~al~ 109 (354)
+|+||+||||+|+||+++++.|+..++++ ||+|+|+++ ++|+++||+|+.. ...++.. +++ +++++
T Consensus 1 ~p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~--~~~-~~~~~ 77 (322)
T cd01338 1 KPVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVIT--DDP-NVAFK 77 (322)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEe--cCc-HHHhC
Confidence 46799999988999999999999999998 999999954 6899999999863 1234432 344 68899
Q ss_pred CCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHhC-CCCCCCEEEe
Q 018512 110 GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAG-TYDPKKLLGV 187 (354)
Q Consensus 110 ~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~~-~~p~~kviG~ 187 (354)
|||+||++||.++++|++|.|++..|++++++++++|++++ |++++|++|||+|++|+++ ++.+ +||++||||+
T Consensus 78 daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~----~k~sg~~p~~~ViG~ 153 (322)
T cd01338 78 DADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNALIA----MKNAPDIPPDNFTAM 153 (322)
T ss_pred CCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHHH----HHHcCCCChHheEEe
Confidence 99999999999999999999999999999999999999999 5999999999999998765 6778 5999999999
Q ss_pred ccchHHHHHHHHHHHhCCCCCCCcc-eEEeecCCccccccccccCCCC-C----CChHH--HHHHHHHHhcchhHHHhhh
Q 018512 188 TMLDVVRANTFVAEVLGLDPRDVDV-PVVGGHAGVTILPLLSQVKPPC-S----FTQEE--TEYLTNRIQNGGTEVVEAK 259 (354)
Q Consensus 188 t~ld~~r~~~~la~~l~v~~~~v~~-~v~G~hg~~~~vp~~s~~~v~~-~----~~~~~--~~~i~~~v~~~~~~i~~~~ 259 (354)
|.||+.||++.+|+++|+++++|++ +|||+||+ +++|+||++.+.+ + +.+.+ +++|.+++++++++|++
T Consensus 154 t~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeHG~-s~vp~~S~~~v~g~pl~~~~~~~~~~~~~i~~~v~~~g~~Ii~-- 230 (322)
T cd01338 154 TRLDHNRAKSQLAKKAGVPVTDVKNMVIWGNHSP-TQYPDFTNATIGGKPAAEVINDRAWLEDEFIPTVQKRGAAIIK-- 230 (322)
T ss_pred hHHHHHHHHHHHHHHhCcChhHeEEEEEEeCCcc-cEEEehhhcEECCEeHHHhcChHhhHHHHHHHHHHhhHHHHHh--
Confidence 9999999999999999999999997 56999999 9999999998742 1 34443 57899999999999999
Q ss_pred ccCCcchhhHH-HHHHHHHHHHHhccCCCCcEEEee-eeeccC--CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHH
Q 018512 260 AGAGSATLSMA-YAAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLE 335 (354)
Q Consensus 260 ~~kg~~~~s~A-~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~--~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~ 335 (354)
+||+++|++| .++++++++|++|++.+ .++|++ +++|+| |+++|||+||++|++|+++++++ +|+++|+++|+
T Consensus 231 -~kG~t~~~~~a~a~~~iv~ail~~~~~~-~i~~~sv~~~g~yg~~~~v~~s~P~~ig~~Gv~~i~~l-~L~~~E~~~l~ 307 (322)
T cd01338 231 -ARGASSAASAANAAIDHMRDWVLGTPEG-DWFSMAVPSDGSYGIPEGLIFSFPVRSKGGGYEIVEGL-EIDDFAREKID 307 (322)
T ss_pred -CcCCccHHHHHHHHHHHHHHHhcCCCCC-eEEEEEEEccCccCCCCCeEEEEEEEEeCCEEEEEeCC-CCCHHHHHHHH
Confidence 5789999999 59999999999998522 489998 569999 58999999999999999999996 99999999999
Q ss_pred HHHHHHHHHHHHh
Q 018512 336 KAKKELAGSIQKG 348 (354)
Q Consensus 336 ~sa~~i~~~~~~~ 348 (354)
+|++.|+++.+.+
T Consensus 308 ~s~~~l~~~~~~~ 320 (322)
T cd01338 308 ATLAELLEEREAV 320 (322)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999988765
No 21
>PTZ00082 L-lactate dehydrogenase; Provisional
Probab=100.00 E-value=7.5e-58 Score=438.03 Aligned_cols=293 Identities=33% Similarity=0.577 Sum_probs=262.0
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCC--CCeEEEEeCCCcHHhhhCCCcEEEE
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT--GAVVRGFLGQPQLENALTGMDLVII 116 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~--~~~v~~~~~~~d~~~al~~aDvVIi 116 (354)
+.+||+|||| |+||+++++.++..++. +|+|+|+++ +.+.++|+.|... ....+.. .++|+ ++++|||+||+
T Consensus 5 ~~~KI~IIGa-G~vG~~ia~~la~~gl~-~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~-~~~d~-~~l~~aDiVI~ 80 (321)
T PTZ00082 5 KRRKISLIGS-GNIGGVMAYLIVLKNLG-DVVLFDIVKNIPQGKALDISHSNVIAGSNSKVI-GTNNY-EDIAGSDVVIV 80 (321)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCC-eEEEEeCCCchhhHHHHHHHhhhhccCCCeEEE-ECCCH-HHhCCCCEEEE
Confidence 4469999998 99999999999998874 699999988 5778899998742 1223332 34676 78999999999
Q ss_pred cCCCCCCCCC-----CHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEec-cc
Q 018512 117 PAGVPRKPGM-----TRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT-ML 190 (354)
Q Consensus 117 ~ag~~~~~g~-----~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~t-~l 190 (354)
++|.++++|+ +|.+++..|++++++++++|+++||++|+|++|||+|++++. +++.+++|++||+|+| .|
T Consensus 81 tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~p~a~~iv~sNP~di~t~~----~~~~sg~p~~rviGlgt~l 156 (321)
T PTZ00082 81 TAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYCPNAFVIVITNPLDVMVKL----LQEHSGLPKNKVCGMAGVL 156 (321)
T ss_pred CCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHH----HHHhcCCChhhEEEecCcc
Confidence 9999999999 999999999999999999999999999999999999999865 4788999999999995 99
Q ss_pred hHHHHHHHHHHHhCCCCCCCcceEEeecCCccccccccccCCCC----------CCChHHHHHHHHHHhcchhHHHhhhc
Q 018512 191 DVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----------SFTQEETEYLTNRIQNGGTEVVEAKA 260 (354)
Q Consensus 191 d~~r~~~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~----------~~~~~~~~~i~~~v~~~~~~i~~~~~ 260 (354)
|+.|+++.+|+++|+++++|+++|+||||+ ++||+||++++.+ .++++++++|.+++++++++|++.+
T Consensus 157 ds~R~~~~la~~l~v~~~~v~~~viGeHg~-s~v~~~S~~~i~g~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~i~~~~- 234 (321)
T PTZ00082 157 DSSRLRTYIAEKLGVNPRDVHASVIGAHGD-KMVPLPRYVTVGGIPLSEFIKKGLITQEEIDEIVERTRNTGKEIVDLL- 234 (321)
T ss_pred cHHHHHHHHHHHhCCCcccceeeEEecCCC-ceEecceeeEECCEEHHHhhhcccCCHHHHHHHHHHHHHHHHHHHhhc-
Confidence 999999999999999999999999999999 9999999998742 1455668999999999999999975
Q ss_pred cCCcchhhHHHHHHHHHHHHHhccCCCCcEEEee-eeeccC-CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHH
Q 018512 261 GAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAK 338 (354)
Q Consensus 261 ~kg~~~~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa 338 (354)
|||+++||+|.++++++++|++|++ .++||+ +++|+| .+++|+|+||+||++|+++++++ +|+++|+++|++|+
T Consensus 235 gkg~t~~~ia~a~~~i~~ail~d~~---~v~~vs~~~~g~yg~~~v~~s~P~~ig~~Gv~~i~~~-~l~~~E~~~l~~sa 310 (321)
T PTZ00082 235 GTGSAYFAPAAAAIEMAEAYLKDKK---RVLPCSAYLEGQYGHKDIYMGTPAVIGANGVEKIIEL-DLTPEEQKKFDESI 310 (321)
T ss_pred CCCccHHHHHHHHHHHHHHHHcCCC---cEEEEEEEecccCCCCCeEEEEEEEEeCCeEEEEeCC-CCCHHHHHHHHHHH
Confidence 7899999999999999999999876 489998 679999 67999999999999999999995 99999999999999
Q ss_pred HHHHHHHHH
Q 018512 339 KELAGSIQK 347 (354)
Q Consensus 339 ~~i~~~~~~ 347 (354)
+.|++.++.
T Consensus 311 ~~i~~~~~~ 319 (321)
T PTZ00082 311 KEVKRLEAL 319 (321)
T ss_pred HHHHHHHhh
Confidence 999988654
No 22
>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=3.9e-58 Score=415.09 Aligned_cols=337 Identities=69% Similarity=1.071 Sum_probs=309.0
Q ss_pred HHHHHHHHhccCCCcccchhhhhhhhcccCCCCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHh
Q 018512 8 NQRIARISAHLYPPNLQENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADIS 87 (354)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~ 87 (354)
.+++-+.++++.+ .+..+|.. +..+..||+|.||+|-+|+.+..+|+.+++.+++.|||+....|.+.||.
T Consensus 3 ~~~~~~~~~~~~~---~~~~~~~~------~~~~~~KVAvlGAaGGIGQPLSLLlK~np~Vs~LaLYDi~~~~GVaaDlS 73 (345)
T KOG1494|consen 3 LKSLIRSSASLSS---GPKRVFSS------GSQRGLKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIANTPGVAADLS 73 (345)
T ss_pred hHHHHHhhhhhcc---CCcccccc------cccCcceEEEEecCCccCccHHHHHhcCcccceeeeeecccCCccccccc
Confidence 3456667777632 22222222 34555699999999999999999999999999999999988899999999
Q ss_pred cCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchH
Q 018512 88 HMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVP 167 (354)
Q Consensus 88 ~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~ 167 (354)
|..+...+.++.+...+++|++|||+|||.||+||+|||+|+|++..|..++++++..+.++||++.+.++|||+|...+
T Consensus 74 HI~T~s~V~g~~g~~~L~~al~~advVvIPAGVPRKPGMTRDDLFn~NAgIv~~l~~aia~~cP~A~i~vIsNPVNstVP 153 (345)
T KOG1494|consen 74 HINTNSSVVGFTGADGLENALKGADVVVIPAGVPRKPGMTRDDLFNINAGIVKTLAAAIAKCCPNALILVISNPVNSTVP 153 (345)
T ss_pred ccCCCCceeccCChhHHHHHhcCCCEEEecCCCCCCCCCcHHHhhhcchHHHHHHHHHHHhhCccceeEeecCcccccch
Confidence 99988888888777889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCEEEeccchHHHHHHHHHHHhCCCC-CCCcceEEeecCCccccccccccCCCCCCChHHHHHHHH
Q 018512 168 IAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDP-RDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTN 246 (354)
Q Consensus 168 ~~~~~~~~~~~~p~~kviG~t~ld~~r~~~~la~~l~v~~-~~v~~~v~G~hg~~~~vp~~s~~~v~~~~~~~~~~~i~~ 246 (354)
++++++++.+.|+++|++|+|.||..|.+.++++.++++| ++++++|+|+|.+.+++|++|+..+...+++++++.|+.
T Consensus 154 IaaevlKk~G~ydpkklfGVTtLDvVRA~tFv~~~~~~~p~~~v~VPVIGGHaG~TIlPLlSQ~~p~~~~~~~~~~~Lt~ 233 (345)
T KOG1494|consen 154 IAAEVLKKAGVYDPKKLFGVTTLDVVRANTFVAEVLNLDPAEDVDVPVIGGHAGITIIPLLSQCKPPFRFTDDEIEALTH 233 (345)
T ss_pred HHHHHHHHcCCCCccceeceehhhhhhHHHHHHHHhCCCchhcCCcceecCcCCceEeeecccCCCcccCCHHHHHHHHH
Confidence 9999999999999999999999999999999999999999 559999999998889999999999888899999999999
Q ss_pred HHhcchhHHHhhhccCCcchhhHHHHHHHHHHHHHhccCCCCcEEEeeeeeccCCCccEEEEeEEEcCCCeEEeccCCCC
Q 018512 247 RIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPL 326 (354)
Q Consensus 247 ~v~~~~~~i~~~~~~kg~~~~s~A~a~~~ii~si~~~~~~~~~v~~~~~~~g~~~~~~~~svPv~ig~~Gv~~i~~~~~L 326 (354)
+++..+.||.++|.|+|+..+|+|+|.++++.+++++.+++..+..|+|+....-+-.||+.|+++|++|++++..+++|
T Consensus 234 RiQ~gGtEVV~AKaGaGSATLSMAyAga~fa~s~lrgl~G~~~v~ecafV~s~~~~~~fFaspv~Lg~~Gv~~v~~l~~l 313 (345)
T KOG1494|consen 234 RIQNGGTEVVKAKAGAGSATLSMAYAGAKFADSLLRGLNGDEDVVECAFVASPVTELPFFATPVTLGKKGVEEVLGLGKL 313 (345)
T ss_pred HHHhCCceEEEeccCCCchhhhHHHHHHHHHHHHHHHhCCCCCeEEEeEEeccccCccceeceEEecCCceeeecCCCcc
Confidence 99999999999999999999999999999999999999876678899998776546689999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 018512 327 NEYERIGLEKAKKELAGSIQKGISFSK 353 (354)
Q Consensus 327 ~~~E~~~l~~sa~~i~~~~~~~~~~~~ 353 (354)
+++|++.|+.+..+|+..++++.+|++
T Consensus 314 sd~E~~~l~~~~~eLk~sI~KGv~F~~ 340 (345)
T KOG1494|consen 314 SDYEEKALEAAKPELKKSIEKGVTFVK 340 (345)
T ss_pred CHHHHHHHHHHHHHHHHHHHhhHHHHh
Confidence 999999999999999999999999875
No 23
>cd00300 LDH_like L-lactate dehydrogenase-like enzymes. Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot
Probab=100.00 E-value=2.6e-58 Score=438.25 Aligned_cols=286 Identities=29% Similarity=0.423 Sum_probs=258.0
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCC-CeEEEEeCCCcHHhhhCCCcEEEEcCCCC
Q 018512 45 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG-AVVRGFLGQPQLENALTGMDLVIIPAGVP 121 (354)
Q Consensus 45 I~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~-~~v~~~~~~~d~~~al~~aDvVIi~ag~~ 121 (354)
|+|||+ |.||+++++.|+..++..+|+|+|+++ +.++++||.|+... ...+... ++| +++++|||+||+++|.|
T Consensus 1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~-~~~-~~~l~~aDiVIitag~p 77 (300)
T cd00300 1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVR-GGD-YADAADADIVVITAGAP 77 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEE-CCC-HHHhCCCCEEEEcCCCC
Confidence 689999 999999999999999988999999987 68999999998642 2223322 345 47899999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe-ccchHHHHHHHHH
Q 018512 122 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVA 200 (354)
Q Consensus 122 ~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~-t~ld~~r~~~~la 200 (354)
+++|++|.|++.+|+++++++++.|+++||++|+|++|||+|+++++ +++++|+|++||+|+ |.||+.|+++++|
T Consensus 78 ~~~~~~R~~l~~~n~~i~~~~~~~i~~~~p~~~viv~sNP~d~~~~~----~~~~sg~~~~kviG~gt~lDs~r~~~~la 153 (300)
T cd00300 78 RKPGETRLDLINRNAPILRSVITNLKKYGPDAIILVVSNPVDILTYV----AQKLSGLPKNRVIGSGTLLDSARFRSLLA 153 (300)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccChHHHHHHH----HHHHhCcCHHHEEecCCcHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999865 478889999999999 7999999999999
Q ss_pred HHhCCCCCCCcceEEeecCCccccccccccCCCC-C------CChHHHHHHHHHHhcchhHHHhhhccCCcchhhHHHHH
Q 018512 201 EVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-S------FTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAA 273 (354)
Q Consensus 201 ~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~-~------~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~s~A~a~ 273 (354)
+++|+++++|+++|+|+||+ +++|+||++++.+ + .++..++++.+++++++++|++ +||+++|++|.++
T Consensus 154 ~~l~v~~~~v~~~viGeHg~-s~v~~~S~~~v~g~p~~~~~~~~~~~~~~l~~~v~~~~~~ii~---~kg~t~~~~a~a~ 229 (300)
T cd00300 154 EKLDVDPQSVHAYVLGEHGD-SQVVAWSTATVGGLPLEELAPFTKLDLEAIEEEVRTSGYEIIR---LKGATNYGIATAI 229 (300)
T ss_pred HHhCCCcccEEEEEEeccCC-ceeeeeeeeEECCEEHHHhhcccHHHHHHHHHHHHHHHHHHHH---ccCcchHHHHHHH
Confidence 99999999999999999999 9999999998753 1 1334578999999999999999 5789999999999
Q ss_pred HHHHHHHHhccCCCCcEEEee-eeeccC-CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHHHHH
Q 018512 274 VKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSI 345 (354)
Q Consensus 274 ~~ii~si~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~ 345 (354)
++++++|+++.+ .++|++ +++|+| ++++|||+||++|++|+++++++ +|+++|+++|++|+++|++.+
T Consensus 230 ~~~~~ai~~~~~---~v~~~s~~~~g~yg~~~~~~s~Pv~ig~~Gi~~i~~l-~L~~~E~~~l~~s~~~l~~~~ 299 (300)
T cd00300 230 ADIVKSILLDER---RVLPVSAVQEGQYGIEDVALSVPAVVGREGVVRILEI-PLTEDEEAKLQKSAEALKEVL 299 (300)
T ss_pred HHHHHHHHcCCC---eEEEEEEEecCccCCCCEEEEEEEEEeCCCeEEEecC-CCCHHHHHHHHHHHHHHHHHh
Confidence 999999999865 489998 579999 78999999999999999999995 999999999999999999765
No 24
>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent. The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.
Probab=100.00 E-value=7.8e-58 Score=435.45 Aligned_cols=289 Identities=31% Similarity=0.510 Sum_probs=259.5
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCC----CeEEEEeCCCcHHhhhCCCcEEEE
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG----AVVRGFLGQPQLENALTGMDLVII 116 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~----~~v~~~~~~~d~~~al~~aDvVIi 116 (354)
|||+|||+ |.||+.+|+.++..++. +|+|+|+++ ..+.++|+.|.... ..++ .++|+ +++++||+||+
T Consensus 2 ~KV~VIGa-G~vG~~iA~~la~~g~~-~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~---~t~d~-~~~~~aDiVIi 75 (305)
T TIGR01763 2 KKISVIGA-GFVGATTAFRLAEKELA-DLVLLDVVEGIPQGKALDMYEASPVGGFDTKVT---GTNNY-ADTANSDIVVI 75 (305)
T ss_pred CEEEEECc-CHHHHHHHHHHHHcCCC-eEEEEeCCCChhHHHHHhhhhhhhccCCCcEEE---ecCCH-HHhCCCCEEEE
Confidence 69999999 99999999999998887 799999987 56777888775421 2233 24676 45999999999
Q ss_pred cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe-ccchHHHH
Q 018512 117 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRA 195 (354)
Q Consensus 117 ~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~-t~ld~~r~ 195 (354)
++|.|+++|++|.|++..|++++++++++|.+++|++++|++|||+|++++++ ++.+|+|++||||+ |.||+.|+
T Consensus 76 tag~p~~~~~sR~~l~~~N~~iv~~i~~~I~~~~p~~~iIv~tNP~di~t~~~----~~~sg~~~~rviG~g~~lds~R~ 151 (305)
T TIGR01763 76 TAGLPRKPGMSREDLLSMNAGIVREVTGRIMEHSPNPIIVVVSNPLDAMTYVA----WQKSGFPKERVIGQAGVLDSARF 151 (305)
T ss_pred cCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHH----HHHHCcCHHHEEEeccchHHHHH
Confidence 99999999999999999999999999999999999999999999999998654 78899999999999 58999999
Q ss_pred HHHHHHHhCCCCCCCcceEEeecCCccccccccccCCCC-C----CChHHHHHHHHHHhcchhHHHhhhccCCcchhhHH
Q 018512 196 NTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-S----FTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMA 270 (354)
Q Consensus 196 ~~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~-~----~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~s~A 270 (354)
++.+|+++++++++|+++||||||+ +++|+||.+++.+ + ++++.++++.+++++++++|++.+ |||+++|++|
T Consensus 152 ~~~la~~l~v~~~~v~~~v~GeHg~-s~~~~wS~~~i~g~~~~~~~~~~~~~~l~~~v~~~g~~ii~~~-~kg~t~~~~a 229 (305)
T TIGR01763 152 RTFIAMELGVSVQDVTACVLGGHGD-AMVPLVRYSTVAGIPVADLISAERIAEIVERTRKGGGEIVNLL-KQGSAYYAPA 229 (305)
T ss_pred HHHHHHHhCcCHHHeeeeEEecCCC-cEEeeeeeeEECCEEHHHhcCHHHHHHHHHHHHHHHHHHHHhc-CCCChHHHHH
Confidence 9999999999999999999999999 9999999998753 2 345558999999999999999975 6899999999
Q ss_pred HHHHHHHHHHHhccCCCCcEEEee-eeeccC-CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 018512 271 YAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQK 347 (354)
Q Consensus 271 ~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~~~ 347 (354)
.++++++++|++|++ .++|++ +++|+| .+++|+|+||+||++|+++++++ +|+++|+++|++|++.|++.++.
T Consensus 230 ~~~~~i~~ai~~~~~---~v~~~s~~~~~~yg~~~v~~s~P~~ig~~Gv~~i~~~-~l~~~E~~~l~~s~~~i~~~~~~ 304 (305)
T TIGR01763 230 ASVVEMVEAILKDRK---RVLPCAAYLDGQYGIDGIYVGVPVILGKNGVEHIYEL-KLDQSELALLNKSAKIVDENCKM 304 (305)
T ss_pred HHHHHHHHHHhCCCC---eEEEEEEEecccCCCCceEEEEEEEEeCCeEEEEeCC-CCCHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999975 489998 679999 68999999999999999999996 99999999999999999988753
No 25
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=1.5e-56 Score=427.59 Aligned_cols=288 Identities=28% Similarity=0.447 Sum_probs=260.3
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCC-CCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT-GAVVRGFLGQPQLENALTGMDLVIIPAG 119 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~-~~~v~~~~~~~d~~~al~~aDvVIi~ag 119 (354)
|||+|||+ |.||+++++.|+..++..+|+|+|+++ +.+.++|+.|... ....... ++++ +++++||+||++++
T Consensus 1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~--~~d~-~~l~~aDiViita~ 76 (308)
T cd05292 1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIY--AGDY-ADCKGADVVVITAG 76 (308)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEe--eCCH-HHhCCCCEEEEccC
Confidence 69999999 999999999999999888999999987 6789999998753 1223332 3565 78999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe-ccchHHHHHHH
Q 018512 120 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTF 198 (354)
Q Consensus 120 ~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~-t~ld~~r~~~~ 198 (354)
.++++|++|.|++..|+++++++++.+++++|+++++++|||+|++++++ ++.+|||++||||+ |.||+.|++++
T Consensus 77 ~~~~~~~~r~dl~~~n~~i~~~~~~~l~~~~~~giiiv~tNP~d~~~~~~----~~~sg~p~~~viG~gt~LDs~R~~~~ 152 (308)
T cd05292 77 ANQKPGETRLDLLKRNVAIFKEIIPQILKYAPDAILLVVTNPVDVLTYVA----YKLSGLPPNRVIGSGTVLDTARFRYL 152 (308)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHH----HHHHCcCHHHeecccchhhHHHHHHH
Confidence 99999999999999999999999999999999999999999999998764 78889999999999 89999999999
Q ss_pred HHHHhCCCCCCCcceEEeecCCccccccccccCCCC------------CCChHHHHHHHHHHhcchhHHHhhhccCCcch
Q 018512 199 VAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC------------SFTQEETEYLTNRIQNGGTEVVEAKAGAGSAT 266 (354)
Q Consensus 199 la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~------------~~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~ 266 (354)
+|+++++++++|+++|||+||+ +++|+||++++.+ .+++++++++.+++++++++|++ +||+++
T Consensus 153 la~~~~v~~~~v~~~viGeHg~-~~~~~~S~~~v~g~~~~~~~~~~~~~~~~~~~~~l~~~v~~~g~~ii~---~kg~t~ 228 (308)
T cd05292 153 LGEHLGVDPRSVHAYIIGEHGD-SEVAVWSSANIGGVPLDEFCKLCGRPFDEEVREEIFEEVRNAAYEIIE---RKGATY 228 (308)
T ss_pred HHHHhCCCccceeceeeccCCC-cEEecceeeeECCEEHHHHhhhcccccCHHHHHHHHHHHHHHHHHHHH---cCCccH
Confidence 9999999999999999999999 9999999998642 23345688999999999999999 468999
Q ss_pred hhHHHHHHHHHHHHHhccCCCCcEEEee-eeeccC-CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHHHH
Q 018512 267 LSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGS 344 (354)
Q Consensus 267 ~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~ 344 (354)
|++|.++++++++|++|.+ .++|++ +++|+| .+++|+|+||+||++|+++++++ +||++|+++|++|++.|++.
T Consensus 229 ~~~a~a~~~i~~ail~~~~---~v~~~s~~~~g~yg~~~~~~s~P~~ig~~Gv~~i~~~-~L~~~E~~~l~~s~~~i~~~ 304 (308)
T cd05292 229 YAIGLALARIVEAILRDEN---SVLTVSSLLDGQYGIKDVALSLPCIVGRSGVERVLPP-PLSEEEEEALRASAEVLKEA 304 (308)
T ss_pred HHHHHHHHHHHHHHHcCCC---cEEEEEEEEcccCCCCCEEEEEEEEEeCCceEEecCC-CCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999865 489997 679999 57999999999999999999995 99999999999999999988
Q ss_pred HH
Q 018512 345 IQ 346 (354)
Q Consensus 345 ~~ 346 (354)
++
T Consensus 305 ~~ 306 (308)
T cd05292 305 IE 306 (308)
T ss_pred Hh
Confidence 76
No 26
>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent. This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography
Probab=100.00 E-value=1.4e-56 Score=429.17 Aligned_cols=296 Identities=24% Similarity=0.321 Sum_probs=254.7
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCCc-----EEEEEecCC----chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEE
Q 018512 44 KVAILGAAGGIGQPLAMLMKINPLVS-----VLHLYDVVN----TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLV 114 (354)
Q Consensus 44 kI~IiGa~G~vG~~~a~~l~~~~~~~-----ei~L~D~~~----~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvV 114 (354)
||+||||+|+||+++++.|+..+++. +|+|+|+++ ++++++||.|+.... ...+..+++.+++++|||+|
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~~a~g~~~Dl~d~~~~~-~~~~~~~~~~~~~~~~aDiV 79 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMKVLEGVVMELMDCAFPL-LDGVVPTHDPAVAFTDVDVA 79 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcccccceeEeehhcccchh-cCceeccCChHHHhCCCCEE
Confidence 69999999999999999999888765 799999954 578999999986311 11122233446899999999
Q ss_pred EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe-ccchH
Q 018512 115 IIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDV 192 (354)
Q Consensus 115 Ii~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~-t~ld~ 192 (354)
|++||.|+++|++|.+++..|++++++++++|.+++ |++++|++|||+|++|+++ ++.+++++.++||+ |.||+
T Consensus 80 VitAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvsNPvDv~t~v~----~~~sg~~~~~vig~gt~LDs 155 (324)
T TIGR01758 80 ILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVGNPANTNALVL----SNYAPSIPPKNFSALTRLDH 155 (324)
T ss_pred EEcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCcHHHHHHHH----HHHcCCCCcceEEEeeehHH
Confidence 999999999999999999999999999999999996 9999999999999998765 77887777789999 89999
Q ss_pred HHHHHHHHHHhCCCCCCCc-ceEEeecCCccccccccccCCC-C----C----CChHH--HHHHHHHHhcchhHHHhhhc
Q 018512 193 VRANTFVAEVLGLDPRDVD-VPVVGGHAGVTILPLLSQVKPP-C----S----FTQEE--TEYLTNRIQNGGTEVVEAKA 260 (354)
Q Consensus 193 ~r~~~~la~~l~v~~~~v~-~~v~G~hg~~~~vp~~s~~~v~-~----~----~~~~~--~~~i~~~v~~~~~~i~~~~~ 260 (354)
+||++++|+++|+++++|+ ++||||||+ +++|+||++++. + + ++++. +++|.+++++++++|++.+
T Consensus 156 ~R~r~~la~~l~v~~~~V~~~~V~GeHG~-s~v~~~S~~~v~~g~~~~pl~~~~~~~~~~~~~i~~~v~~~g~~Ii~~k- 233 (324)
T TIGR01758 156 NRALAQVAERAGVPVSDVKNVIIWGNHSS-TQYPDVNHATVTKGGKQKPVREAIKDDAYLDGEFITTVQQRGAAIIRAR- 233 (324)
T ss_pred HHHHHHHHHHhCCChhhceEeEEEECCCC-CcccccccceecCCCCccCHHHHhcchhhHHHHHHHHHHhCHHHHHhcc-
Confidence 9999999999999999995 699999999 999999999886 3 2 22222 5789999999999999963
Q ss_pred cCCcchhhHHHHHHHHHHHHHhccCCCCcEEEee-eeecc-C--CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHH
Q 018512 261 GAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQ-V--TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEK 336 (354)
Q Consensus 261 ~kg~~~~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~-~--~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~ 336 (354)
++++.|++|.++++++++|+++... +.++|++ +++|+ | |+++|||+||++|++|++.+.++ +|+++|+++|++
T Consensus 234 -~~~t~~~ia~~~~~i~~ai~~~~~~-~~i~~vs~~~~g~~yg~~~~v~~s~P~~ig~g~~~~i~el-~L~~~E~~~l~~ 310 (324)
T TIGR01758 234 -KLSSALSAAKAAVDQMHDWVLGTPE-GTFVSMGVYSDGSPYGVPKGLIFSFPVTCKNGEWKIVEGL-CVDDSSRKKLAL 310 (324)
T ss_pred -CCCHHHHHHHHHHHHHHHHhcCCCC-CeEEEEEeecCCcccCCCCceEEEEEEEEcCCeEEEecCC-CCCHHHHHHHHH
Confidence 4689999999999999999954332 2599998 67999 8 48999999999996666666665 999999999999
Q ss_pred HHHHHHHHHHHhh
Q 018512 337 AKKELAGSIQKGI 349 (354)
Q Consensus 337 sa~~i~~~~~~~~ 349 (354)
|++.|++.++.++
T Consensus 311 s~~~lk~~~~~~~ 323 (324)
T TIGR01758 311 TAKELEEERDEAL 323 (324)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999998875
No 27
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=1.5e-56 Score=429.75 Aligned_cols=296 Identities=24% Similarity=0.330 Sum_probs=258.6
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCCc-----EEEEEecCC----chhHHHHHhcCCC--CCeEEEEeCCCcHHhhhC
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPLVS-----VLHLYDVVN----TPGVTADISHMDT--GAVVRGFLGQPQLENALT 109 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~-----ei~L~D~~~----~~g~~~dl~~~~~--~~~v~~~~~~~d~~~al~ 109 (354)
+|.||+||||+|+||+++++.|+..++.+ +|+|+|+++ +.++++|+.|+.. ...+.. +.+++++++
T Consensus 1 ~~~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~~~~~~~~~~---~~~~~~~l~ 77 (325)
T cd01336 1 EPIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAFPLLKSVVA---TTDPEEAFK 77 (325)
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhccccccCCcee---cCCHHHHhC
Confidence 46799999999999999999999888764 999999954 5778889999752 122322 356779999
Q ss_pred CCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHh-CCCCCCCEEEe
Q 018512 110 GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKA-GTYDPKKLLGV 187 (354)
Q Consensus 110 ~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~-~~~p~~kviG~ 187 (354)
|||+||++||.+++++++|.+++..|+++++++++.|++++ |++++|++|||+|++++++ ++. +++|+++ ||+
T Consensus 78 ~aDiVI~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~----~k~~~~~~~~~-ig~ 152 (325)
T cd01336 78 DVDVAILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGNPANTNALIL----LKYAPSIPKEN-FTA 152 (325)
T ss_pred CCCEEEEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecCcHHHHHHHH----HHHcCCCCHHH-EEe
Confidence 99999999999999999999999999999999999999997 7999999999999998765 666 5788777 888
Q ss_pred -ccchHHHHHHHHHHHhCCCCCCCc-ceEEeecCCccccccccccCCC----C-C----CChHH--HHHHHHHHhcchhH
Q 018512 188 -TMLDVVRANTFVAEVLGLDPRDVD-VPVVGGHAGVTILPLLSQVKPP----C-S----FTQEE--TEYLTNRIQNGGTE 254 (354)
Q Consensus 188 -t~ld~~r~~~~la~~l~v~~~~v~-~~v~G~hg~~~~vp~~s~~~v~----~-~----~~~~~--~~~i~~~v~~~~~~ 254 (354)
|.||+.||++++|+++++++++|+ .+||||||+ +++|+||++++. . + +++++ +++|.+++++++++
T Consensus 153 gt~LDs~R~r~~la~~l~v~~~~v~~~~V~GeHG~-s~~~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~i~~~v~~~g~~ 231 (325)
T cd01336 153 LTRLDHNRAKSQIALKLGVPVSDVKNVIIWGNHSS-TQYPDVNHATVELNGKGKPAREAVKDDAWLNGEFISTVQKRGAA 231 (325)
T ss_pred eehHHHHHHHHHHHHHhCcChhhceEeEEEEcCCC-CeeeccccceeecCCCCccHHHHhcccchhHHHHHHHHHhhHHH
Confidence 999999999999999999999996 569999999 999999999885 3 2 22222 58899999999999
Q ss_pred HHhhhccCCcchhhHHHHHHHHHHHHHhccCCCCcEEEee-eeeccC--CCccEEEEeEEEcCCCeEEeccCCCCCHHHH
Q 018512 255 VVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYER 331 (354)
Q Consensus 255 i~~~~~~kg~~~~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~--~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~ 331 (354)
|++.+ +|++.||+|.++++++++|++|.+. +.++|++ +++|+| ++++|||+||+||++|+.++.++ +|+++|+
T Consensus 232 Ii~~~--~g~t~~~~a~~~~~i~~ail~~~~~-~~v~~vs~~~~g~yg~~~~v~~s~P~~ig~~Gv~~i~~~-~L~~~E~ 307 (325)
T cd01336 232 VIKAR--KLSSAMSAAKAICDHVHDWWFGTPE-GEFVSMGVYSDGSYGVPEGLIFSFPVTCKNGKWKIVQGL-SIDDFSR 307 (325)
T ss_pred HHHcc--ccchHHHHHHHHHHHHHHHHcCCCC-CeEEEEEEecCCCcCCCCceEEEEEEEEeCCEEEEecCC-CCCHHHH
Confidence 99963 6799999999999999999998532 2599998 579999 48999999999999999999996 9999999
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 018512 332 IGLEKAKKELAGSIQKGI 349 (354)
Q Consensus 332 ~~l~~sa~~i~~~~~~~~ 349 (354)
++|++|++.|+++++.++
T Consensus 308 ~~l~~s~~~l~~e~~~~~ 325 (325)
T cd01336 308 EKIDATAKELVEEKETAL 325 (325)
T ss_pred HHHHHHHHHHHHHHHhhC
Confidence 999999999999998764
No 28
>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins. Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas
Probab=100.00 E-value=1.3e-54 Score=413.27 Aligned_cols=287 Identities=34% Similarity=0.568 Sum_probs=256.3
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCC--CeEEEEeCCCcHHhhhCCCcEEEEcCCC
Q 018512 45 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG--AVVRGFLGQPQLENALTGMDLVIIPAGV 120 (354)
Q Consensus 45 I~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~--~~v~~~~~~~d~~~al~~aDvVIi~ag~ 120 (354)
|+|||| |+||+.++..++..++. +|+|+|+++ +.+..+|+.+.... ...+.. .++|+ ++++|||+||+++|.
T Consensus 1 I~IIGa-G~vG~~ia~~la~~~l~-eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~I~-~t~d~-~~l~dADiVIit~g~ 76 (300)
T cd01339 1 ISIIGA-GNVGATLAQLLALKELG-DVVLLDIVEGLPQGKALDISQAAPILGSDTKVT-GTNDY-EDIAGSDVVVITAGI 76 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhCCCc-EEEEEeCCCcHHHHHHHHHHHhhhhcCCCeEEE-EcCCH-HHhCCCCEEEEecCC
Confidence 689999 99999999999998887 999999987 56777888876421 122322 24564 679999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEec-cchHHHHHHHH
Q 018512 121 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT-MLDVVRANTFV 199 (354)
Q Consensus 121 ~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~t-~ld~~r~~~~l 199 (354)
|+++|++|.|.+.+|++++++++++|++++|++++|++|||+|++++++ ++++++|++||+|+| .||+.|+++.+
T Consensus 77 p~~~~~~r~e~~~~n~~i~~~i~~~i~~~~p~~~iIv~sNP~di~t~~~----~~~s~~~~~rviGlgt~lds~r~~~~l 152 (300)
T cd01339 77 PRKPGMSRDDLLGTNAKIVKEVAENIKKYAPNAIVIVVTNPLDVMTYVA----YKASGFPRNRVIGMAGVLDSARFRYFI 152 (300)
T ss_pred CCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHH----HHHhCCCHHHEEEecchHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999998764 788899999999995 89999999999
Q ss_pred HHHhCCCCCCCcceEEeecCCccccccccccCCCC-C----CChHHHHHHHHHHhcchhHHHhhhccCCcchhhHHHHHH
Q 018512 200 AEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-S----FTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAV 274 (354)
Q Consensus 200 a~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~-~----~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~s~A~a~~ 274 (354)
|+++++++++|+++++|+||+ +++|+||++++.+ + +++++++++.+++++++++|++.| |||++.|++|.+++
T Consensus 153 a~~l~v~~~~v~~~v~G~hg~-~~~~~~s~~~v~g~~~~~~~~~~~~~~~~~~v~~~~~~ii~~k-~~g~t~~~~a~~~~ 230 (300)
T cd01339 153 AEELGVSVKDVQAMVLGGHGD-TMVPLPRYSTVGGIPLTELITKEEIDEIVERTRNGGAEIVNLL-KTGSAYYAPAAAIA 230 (300)
T ss_pred HHHhCCCccceEEEEEeCCCC-cceecceecEECCEEHHHhcChHHHHHHHHHHHHHHHHHHhhc-CCCchhHHHHHHHH
Confidence 999999999999999999999 9999999999853 2 345568999999999999999976 67999999999999
Q ss_pred HHHHHHHhccCCCCcEEEee-eeeccC-CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHHHHH
Q 018512 275 KFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSI 345 (354)
Q Consensus 275 ~ii~si~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~ 345 (354)
+++++|++|++ .++|++ +++|+| .+++|||+||+||++|+++++++ +|+++|+++|++|++.|++.+
T Consensus 231 ~i~~ail~~~~---~i~~~s~~~~g~yg~~~~~~s~P~~ig~~G~~~~~~l-~l~~~E~~~l~~s~~~l~~~~ 299 (300)
T cd01339 231 EMVEAILKDKK---RVLPCSAYLEGEYGIKDIFVGVPVVLGKNGVEKIIEL-DLTDEEKEAFDKSVESVKELI 299 (300)
T ss_pred HHHHHHHcCCC---cEEEEEEEeccccCCCCeEEEEEEEEeCCeEEEEeCC-CCCHHHHHHHHHHHHHHHHHh
Confidence 99999999865 489998 679999 56999999999999999999996 999999999999999999865
No 29
>PRK06223 malate dehydrogenase; Reviewed
Probab=100.00 E-value=3.2e-54 Score=411.92 Aligned_cols=292 Identities=32% Similarity=0.565 Sum_probs=260.2
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCC--CeEEEEeCCCcHHhhhCCCcEEEEc
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG--AVVRGFLGQPQLENALTGMDLVIIP 117 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~--~~v~~~~~~~d~~~al~~aDvVIi~ 117 (354)
++||+|||| |+||++++..++..++. +|+|+|+++ +++.++|+.|.... ...+. ..++|+ +++++||+||++
T Consensus 2 ~~KI~VIGa-G~vG~~ia~~la~~~~~-ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i-~~~~d~-~~~~~aDiVii~ 77 (307)
T PRK06223 2 RKKISIIGA-GNVGATLAHLLALKELG-DVVLFDIVEGVPQGKALDIAEAAPVEGFDTKI-TGTNDY-EDIAGSDVVVIT 77 (307)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCe-EEEEEECCCchhHHHHHHHHhhhhhcCCCcEE-EeCCCH-HHHCCCCEEEEC
Confidence 479999999 99999999999998877 999999987 57888888876421 11222 234576 679999999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe-ccchHHHHH
Q 018512 118 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRAN 196 (354)
Q Consensus 118 ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~-t~ld~~r~~ 196 (354)
+|.|+++|++|.|.+.+|++++++++++|++++|++|+|++|||+|++|+++ ++++++|++||||+ |.||+.|++
T Consensus 78 ~~~p~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~viv~tNP~d~~~~~~----~~~s~~~~~~viG~gt~lds~r~~ 153 (307)
T PRK06223 78 AGVPRKPGMSRDDLLGINAKIMKDVAEGIKKYAPDAIVIVVTNPVDAMTYVA----LKESGFPKNRVIGMAGVLDSARFR 153 (307)
T ss_pred CCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHH----HHHhCCCcccEEEeCCCcHHHHHH
Confidence 9999999999999999999999999999999999999999999999998764 68889999999999 599999999
Q ss_pred HHHHHHhCCCCCCCcceEEeecCCccccccccccCCCC-C----CChHHHHHHHHHHhcchhHHHhhhccCCcchhhHHH
Q 018512 197 TFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-S----FTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAY 271 (354)
Q Consensus 197 ~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~-~----~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~s~A~ 271 (354)
+.||+++++++++|+++++|+||+ +++|+||++++.+ + ++++.+++|.++++++++++++.+ +|+++.|++|.
T Consensus 154 ~~la~~l~v~~~~v~~~viGehg~-s~~p~~S~~~v~g~~~~~~~~~~~~~~l~~~v~~~~~~ii~~~-~kg~t~~~~A~ 231 (307)
T PRK06223 154 TFIAEELNVSVKDVTAFVLGGHGD-SMVPLVRYSTVGGIPLEDLLSKEKLDEIVERTRKGGAEIVGLL-KTGSAYYAPAA 231 (307)
T ss_pred HHHHHHhCcChhhCcccEEcCCCC-cceEchhhCEECCEEHHHhCChHHHHHHHHHHHHHHHHHHhhc-ccCChhHHHHH
Confidence 999999999999999999999999 9999999998742 2 455557899999999999999964 57899999999
Q ss_pred HHHHHHHHHHhccCCCCcEEEee-eeeccC-CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 018512 272 AAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQK 347 (354)
Q Consensus 272 a~~~ii~si~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~~~ 347 (354)
++++++++|+.|.+ .++|++ +++|+| .++++||+||+||++|+++++++ +|+++|+++|++|+++|++.++.
T Consensus 232 ~~~~ii~ail~~~~---~~~~~~v~~~g~yg~~~~~~s~P~~i~~~Gv~~i~~~-~l~~~e~~~l~~s~~~l~~~~~~ 305 (307)
T PRK06223 232 SIAEMVEAILKDKK---RVLPCSAYLEGEYGVKDVYVGVPVKLGKNGVEKIIEL-ELDDEEKAAFDKSVEAVKKLIEA 305 (307)
T ss_pred HHHHHHHHHHcCCC---cEEEEEEEecCcCCCCCeEEEeEEEEeCCeEEEEeCC-CCCHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999865 488887 678998 68999999999999999999995 99999999999999999988874
No 30
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=100.00 E-value=2.4e-54 Score=412.36 Aligned_cols=290 Identities=26% Similarity=0.437 Sum_probs=257.3
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC----chhHHHHHhcCCC--CCeEEEEeCCCcHHhhhCCCcEEEE
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN----TPGVTADISHMDT--GAVVRGFLGQPQLENALTGMDLVII 116 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~----~~g~~~dl~~~~~--~~~v~~~~~~~d~~~al~~aDvVIi 116 (354)
|||+|+||+|.+|++++..|+..++..+|+|+|+++ +++..+|+.|... ....+.. .++|+ +++++||+||+
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~-~~~d~-~~l~~aDiVii 78 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIK-ISSDL-SDVAGSDIVII 78 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcEEE-ECCCH-HHhCCCCEEEE
Confidence 799999988999999999999999988999999954 5778899988632 1122322 23464 67999999999
Q ss_pred cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe-ccchHHHH
Q 018512 117 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRA 195 (354)
Q Consensus 117 ~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~-t~ld~~r~ 195 (354)
++|.|+++|++|.|++..|+++++++++.|.+++|+++||+++||+|++|+++ ++.+++|++|+||+ |.||+.|+
T Consensus 79 tag~p~~~~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~npvd~~t~~~----~~~~g~~~~~viG~gt~LDs~R~ 154 (309)
T cd05294 79 TAGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVTNPVDVMTYKA----LKESGFDKNRVFGLGTHLDSLRF 154 (309)
T ss_pred ecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHH----HHhcCCCHHHEeeccchHHHHHH
Confidence 99999999999999999999999999999999999999999999999998764 78889999999999 79999999
Q ss_pred HHHHHHHhCCCCCCCcceEEeecCCccccccccccCCCC-C------CChHHHHHHHHHHhcchhHHHhhhccCCcchhh
Q 018512 196 NTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-S------FTQEETEYLTNRIQNGGTEVVEAKAGAGSATLS 268 (354)
Q Consensus 196 ~~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~-~------~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~s 268 (354)
+++||+++++++++|+++|+||||+ +++|+||++++.+ + +.+.+++++.+++++++++|++. ||++.||
T Consensus 155 ~~~la~~l~v~~~~v~~~viGeHg~-s~~~~~S~~~i~g~~~~~~~~~~~~~~~~i~~~v~~~g~~i~~~---kg~t~~~ 230 (309)
T cd05294 155 KVAIAKHFNVHISEVHTRIIGEHGD-SMVPLISSTSIGGIPIKRFPEYKDFDVEKIVETVKNAGQNIISL---KGGSEYG 230 (309)
T ss_pred HHHHHHHHCcChHHeEEEEEecCCC-ceEeeeeecEECCEEHHHhhcccHHHHHHHHHHHHHHHHHHHHh---cCCchhh
Confidence 9999999999999999999999999 9999999998743 1 22445789999999999999994 6789999
Q ss_pred HHHHHHHHHHHHHhccCCCCcEEEee-eeeccC--CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHHHHH
Q 018512 269 MAYAAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSI 345 (354)
Q Consensus 269 ~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~--~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~ 345 (354)
+|.++++++++|++|++ .++|++ +++|+| .+++++|+||+||++|+++++++ +|+++|+++|++|++.|++.+
T Consensus 231 ~a~~~~~ii~ail~~~~---~v~~vsv~~~g~~~~~~~~~~svP~~ig~~Gv~~i~~l-~l~~~E~~~l~~s~~~i~~~~ 306 (309)
T cd05294 231 PASAISNLVRTIANDER---RILTVSTYLEGEIDGIRDVCIGVPVKLGKNGIEEIVPI-EMDDDEREAFRKSAEIVKKYT 306 (309)
T ss_pred HHHHHHHHHHHHHCCCC---eEEEEEEEECCccCCCCCeEEEeEEEEcCCccEEEeCC-CCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999976 488887 578887 34899999999999999999996 999999999999999999876
Q ss_pred H
Q 018512 346 Q 346 (354)
Q Consensus 346 ~ 346 (354)
+
T Consensus 307 ~ 307 (309)
T cd05294 307 R 307 (309)
T ss_pred h
Confidence 5
No 31
>PLN00135 malate dehydrogenase
Probab=100.00 E-value=3.1e-54 Score=409.38 Aligned_cols=272 Identities=22% Similarity=0.321 Sum_probs=240.9
Q ss_pred EEEEEecCC----chhHHHHHhcCCC-C-CeEEEEeCCCcHHhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHH
Q 018512 70 VLHLYDVVN----TPGVTADISHMDT-G-AVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLC 143 (354)
Q Consensus 70 ei~L~D~~~----~~g~~~dl~~~~~-~-~~v~~~~~~~d~~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~ 143 (354)
.++|+|+++ ++|+++||.|+.. . ..++. +++.+++++|||+||++||.|+++|++|.|++..|++++++++
T Consensus 15 ~l~L~D~~~~~~~a~g~~~Dl~da~~~~~~~i~~---~~~~y~~~~daDiVVitAG~~~k~g~sR~dll~~N~~I~~~i~ 91 (309)
T PLN00135 15 ILHMLDIPPAAEALNGVKMELIDAAFPLLKGVVA---TTDVVEACKGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKSQA 91 (309)
T ss_pred EEEEecCcccccchhhHHHHHHhhhHHhcCCcEe---cCCHHHHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHH
Confidence 899999976 6899999999862 1 22321 3454689999999999999999999999999999999999999
Q ss_pred HHHhhh-CCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe-ccchHHHHHHHHHHHhCCCCCCC-cceEEeecCC
Q 018512 144 EGIAKC-CPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDV-DVPVVGGHAG 220 (354)
Q Consensus 144 ~~i~~~-~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~-t~ld~~r~~~~la~~l~v~~~~v-~~~v~G~hg~ 220 (354)
+.|.++ +|++++|++|||+|++||++ ++.+++|++|+||+ |.||++||++++|+++|+++++| +++||||||+
T Consensus 92 ~~i~~~~~p~aivivvsNPvDv~t~~~----~~~sg~~~~~vig~gt~LDsaR~r~~la~~l~v~~~~V~~~~VlGeHG~ 167 (309)
T PLN00135 92 SALEKHAAPDCKVLVVANPANTNALIL----KEFAPSIPEKNITCLTRLDHNRALGQISERLGVPVSDVKNVIIWGNHSS 167 (309)
T ss_pred HHHHHhcCCCeEEEEeCCcHHHHHHHH----HHHcCCCCccEEEeeehHHHHHHHHHHHHHhCcChhhceeeEEEEcCCC
Confidence 999996 89999999999999998764 78889999999999 89999999999999999999999 6999999999
Q ss_pred ccccccccccCC----CC-C----CChHH--HHHHHHHHhcchhHHHhhhccCCcchhhHHHHHHHHHHHHHhccCCCCc
Q 018512 221 VTILPLLSQVKP----PC-S----FTQEE--TEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAG 289 (354)
Q Consensus 221 ~~~vp~~s~~~v----~~-~----~~~~~--~~~i~~~v~~~~~~i~~~~~~kg~~~~s~A~a~~~ii~si~~~~~~~~~ 289 (354)
++||+||++++ ++ + +.+++ .++|.+++++++++|++.+ ||++.||+|.++++++++|+++++. ..
T Consensus 168 -s~v~~~S~a~v~~~~~g~p~~e~~~~~~~~~~~i~~~v~~~g~~Ii~~~--kg~t~~~ia~a~~~iv~ai~~~~~~-~~ 243 (309)
T PLN00135 168 -TQYPDVNHATVKTPSGEKPVRELVADDAWLNGEFITTVQQRGAAIIKAR--KLSSALSAASSACDHIRDWVLGTPE-GT 243 (309)
T ss_pred -ceeeccccceEecCCCCcCHHHHhCchhhHHHHHHHHHHHHHHHHHHcc--CccHHHHHHHHHHHHHHHHHhCCcC-Ce
Confidence 99999999988 42 2 23333 5789999999999999953 6899999999999999999995421 25
Q ss_pred EEEee-eeeccC--CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 018512 290 VVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSK 353 (354)
Q Consensus 290 v~~~~-~~~g~~--~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~~~~~~~~~ 353 (354)
++|++ +++|+| |+++|||+||++|++|++.+.++ +|+++|+++|++|++.|+++.+.+++.|+
T Consensus 244 v~~vsv~~~g~YGi~~~v~~s~P~vlg~~gve~v~~l-~L~~~E~~~l~~S~~~lk~~~~~~~~~~~ 309 (309)
T PLN00135 244 WVSMGVYSDGSYGVPPGLIYSFPVTCEKGEWSIVQGL-SIDEFSRKKMDATAKELKEEKELAYSCLS 309 (309)
T ss_pred EEEEEEEecCccCCcCCeEEEEEEEEECCEEEEecCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99998 679999 48999999999999999999896 99999999999999999999999998764
No 32
>cd05295 MDH_like Malate dehydrogenase-like. These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=1.8e-54 Score=425.73 Aligned_cols=294 Identities=16% Similarity=0.130 Sum_probs=254.1
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCC-----cEEEEEecC--C--chhHHHHHhcCCCC--CeEEEEeCCCcHHhhh
Q 018512 40 AAGFKVAILGAAGGIGQPLAMLMKINPLV-----SVLHLYDVV--N--TPGVTADISHMDTG--AVVRGFLGQPQLENAL 108 (354)
Q Consensus 40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~-----~ei~L~D~~--~--~~g~~~dl~~~~~~--~~v~~~~~~~d~~~al 108 (354)
.++.+|+|+||+|++|+++++.++....+ -.|+|+|+. . ++|+++||+|+.+. ..+... +++ ++++
T Consensus 121 ~~p~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~--~~~-~ea~ 197 (452)
T cd05295 121 INPLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVT--TDL-DVAF 197 (452)
T ss_pred CCceEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEE--ECC-HHHh
Confidence 34579999999999999999999986432 369999994 3 78999999998631 223433 234 6999
Q ss_pred CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCC--CeEEEEecCCCCCchHHHHHHHHHhC-CCCCCCEE
Q 018512 109 TGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP--NATVNLISNPVNSTVPIAAEVFKKAG-TYDPKKLL 185 (354)
Q Consensus 109 ~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p--~a~viv~tNPv~~~~~~~~~~~~~~~-~~p~~kvi 185 (354)
+|||+||++||.|+++|++|.|++..|++++++++++|.+++| ++++|++|||+|++|+++ ++.+ ++|++||+
T Consensus 198 ~daDvvIitag~prk~G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~tNPvD~~t~i~----~k~apgiP~~rVi 273 (452)
T cd05295 198 KDAHVIVLLDDFLIKEGEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGRTFLNLKTSIL----IKYAPSIPRKNII 273 (452)
T ss_pred CCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHH----HHHcCCCCHHHEE
Confidence 9999999999999999999999999999999999999999999 899999999999998765 5666 99999999
Q ss_pred EeccchHHHHHHHHHHHhCCCCCCC-cceEEeecCCccccccccccCCCC-------------C----CChHH--HHHHH
Q 018512 186 GVTMLDVVRANTFVAEVLGLDPRDV-DVPVVGGHAGVTILPLLSQVKPPC-------------S----FTQEE--TEYLT 245 (354)
Q Consensus 186 G~t~ld~~r~~~~la~~l~v~~~~v-~~~v~G~hg~~~~vp~~s~~~v~~-------------~----~~~~~--~~~i~ 245 (354)
|++.++++|++++||+++||++++| +++||||||+ ++||+||++++.. + +.+++ .+++.
T Consensus 274 g~gtlds~R~r~~LA~kl~V~~~~V~~~~VwGeHG~-sqvpd~S~a~V~G~~~a~~~p~~~~~pl~e~i~d~~w~~~~~~ 352 (452)
T cd05295 274 AVARLQENRAKALLARKLNVNSAGIKDVIVWGNIGG-NTYIDLSKARVYRYDSAIWGPPNYSRPVLELVHDSKWINGEFV 352 (452)
T ss_pred EecchHHHHHHHHHHHHhCcCHHHceeeEEEEccCC-ceeeeeeEEEEcccccccccccccCccHHHHhcchhhhHHHHH
Confidence 9966889999999999999999999 6799999999 9999999998732 1 22333 25677
Q ss_pred HHHhcchhHHHhhhccCCcchhhHHHHHHHHHHHHHhccCCCCcEEEee-eeeccC--CCccEEEEeEEEcCCCeEEecc
Q 018512 246 NRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQ 322 (354)
Q Consensus 246 ~~v~~~~~~i~~~~~~kg~~~~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~--~~~~~~svPv~ig~~Gv~~i~~ 322 (354)
+.++++++ . +||++.||+|.|+++++++|++|++.+ .++||+ +++|+| |+|++||+||++|++|++.+.+
T Consensus 353 ~~v~~rg~---~---rkgsT~~siA~A~~~iv~ail~~t~~~-~ilsvsv~sdG~YGip~gv~~S~Pviig~~Gve~V~~ 425 (452)
T cd05295 353 ATLKSLSS---S---LNHEAAISPAHAIATTLSYWYHGSPPG-EIFSLGVISEGWYGIPEGIVFSMPVKFQNGSWEVVTD 425 (452)
T ss_pred HHHHHHHH---h---ccCChHHHHHHHHHHHHHHHHhCCCCC-eEEEEEEeeccccCCcCCEEEEEEEEEeCCeEEEEeC
Confidence 78888877 2 578999999999999999999998533 499998 679999 6899999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHhh
Q 018512 323 LGPLNEYERIGLEKAKKELAGSIQKGI 349 (354)
Q Consensus 323 ~~~L~~~E~~~l~~sa~~i~~~~~~~~ 349 (354)
+ +|+++|+++|++|+++|.++.+.++
T Consensus 426 L-~L~e~E~~kL~~S~~eL~~E~~~~~ 451 (452)
T cd05295 426 L-ELSEILREVLKRITSDLIQEKLVAL 451 (452)
T ss_pred C-CCCHHHHHHHHHHHHHHHHHHHhhc
Confidence 6 9999999999999999999987764
No 33
>TIGR01756 LDH_protist lactate dehydrogenase. This model represents a family of protist lactate dehydrogenases which have aparrently evolved from a recent protist malate dehydrogenase ancestor. Lactate dehydrogenase converts the hydroxyl at C-2 of lactate to a carbonyl in the product, pyruvate. The preference of this enzyme for NAD or NADP has not been determined. A critical residue in malate dehydrogenase, arginine-91 (T. vaginalis numbering) has been mutated to a leucine, eliminating the positive charge which complemeted the carboxylate in malate which is absent in lactate. Several other more subtle changes are proposed to make the active site smaller to accomadate the less bulky lactate molecule.
Probab=100.00 E-value=3.1e-53 Score=403.52 Aligned_cols=272 Identities=21% Similarity=0.280 Sum_probs=237.2
Q ss_pred EEEEEecCC----chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q 018512 70 VLHLYDVVN----TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEG 145 (354)
Q Consensus 70 ei~L~D~~~----~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~ 145 (354)
.++|+|+++ ++|+++||.|+. .+.......+++++++++|||+||++||.|+++|++|.|++..|++++++++++
T Consensus 17 ~l~L~D~~~~~~~a~g~a~Dl~d~~-~~~~~~~i~~~~~~~~~~daDiVVitaG~~~k~g~tR~dll~~N~~I~~~i~~~ 95 (313)
T TIGR01756 17 CLHLLEIPPALNRLEALAMELEDCA-FPNLAGTIVTTKLEEAFKDIDCAFLVASVPLKPGEVRADLLTKNTPIFKATGEA 95 (313)
T ss_pred EEEEecCCCccchhHhHHHHHHHhc-cccCCceEecCCHHHHhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHH
Confidence 799999976 689999999987 232211112457778999999999999999999999999999999999999999
Q ss_pred HhhhCC-CeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe-ccchHHHHHHHHHHHhCCCCCCCcc-eEEeecCCcc
Q 018512 146 IAKCCP-NATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDV-PVVGGHAGVT 222 (354)
Q Consensus 146 i~~~~p-~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~-t~ld~~r~~~~la~~l~v~~~~v~~-~v~G~hg~~~ 222 (354)
|++++| ++++|++|||+|++|+++. ++.+|||++ +||+ |.||++||++++|++++++|++|+. +||||||+ +
T Consensus 96 i~~~a~~~~ivivvtNPvDv~t~v~~---~~~sg~p~~-vig~gt~LDsaR~r~~la~~l~v~~~~V~~~~V~GeHG~-s 170 (313)
T TIGR01756 96 LSEYAKPTVKVLVIGNPVNTNCLVAM---LHAPKLSAE-NFSSLCMLDHNRAVSRIASKLKVPVDHIYHVVVWGNHAE-S 170 (313)
T ss_pred HHhhCCCCeEEEEeCCchHHHHHHHH---HHcCCCCHH-HEEecccHHHHHHHHHHHHHhCcChhheeeeEEEECCCC-c
Confidence 999995 5889999999999987641 588999998 9999 8999999999999999999999965 59999999 9
Q ss_pred ccccccccCC--CC-C------CChH-HHHHHHHHHhcchhHHHhhhccCCcchhhHH-HHHHHHHHHHHhccCCCCcEE
Q 018512 223 ILPLLSQVKP--PC-S------FTQE-ETEYLTNRIQNGGTEVVEAKAGAGSATLSMA-YAAVKFADACLRGLRGDAGVV 291 (354)
Q Consensus 223 ~vp~~s~~~v--~~-~------~~~~-~~~~i~~~v~~~~~~i~~~~~~kg~~~~s~A-~a~~~ii~si~~~~~~~~~v~ 291 (354)
++|+||++++ .+ + ++++ .++++.+++++++++|++ +||+|+|+++ .++++++++|++|++.+ .++
T Consensus 171 ~vp~~S~~~V~~~G~~~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~---~kg~t~~~~~a~ai~~iv~ail~~~~~~-~i~ 246 (313)
T TIGR01756 171 MVADLTHAEFTKNGKHQKVFDELCRDYPEPDFFEVIAQRAWKILE---MRGFTSAASPVKASLQHMKAWLFGTRPG-EVL 246 (313)
T ss_pred eeecccccEEecCCeehhHhhhcCcHhHHHHHHHHHHHHHHHHHh---CcCCcchHHHHHHHHHHHHHHhcCCCCC-eEE
Confidence 9999999988 43 1 2332 367899999999999999 5789999977 69999999999976533 599
Q ss_pred Eee-eee--ccC--CCccEEEEeEEEcCCCeEEecc-CCCCCHHHHHHHHHHHHHHHHHHHHhhhhh
Q 018512 292 ECA-FVA--SQV--TELPFFASKVRLGRQGAEEIFQ-LGPLNEYERIGLEKAKKELAGSIQKGISFS 352 (354)
Q Consensus 292 ~~~-~~~--g~~--~~~~~~svPv~ig~~Gv~~i~~-~~~L~~~E~~~l~~sa~~i~~~~~~~~~~~ 352 (354)
||+ +++ |+| ++|+++|+||++|++|++++++ + +|+++|+++|++|++.|+++.+.+++.|
T Consensus 247 pvsv~l~~~g~YGi~~~v~~s~P~vig~~Gv~~ive~l-~L~~~E~~~l~~Sa~~l~~e~~~~~~~~ 312 (313)
T TIGR01756 247 SMGIPVPEGNPYGIKPGVIFSFPCTVDEDGKVHVVENF-ELNPWLKTKLAQTEKDLFEERETALKAL 312 (313)
T ss_pred EEEEEecCCCccCCCCCEEEEEEEEEeCCceEEEcCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 998 465 388 4799999999999999999999 6 9999999999999999999999998865
No 34
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=100.00 E-value=5.6e-50 Score=374.66 Aligned_cols=254 Identities=29% Similarity=0.441 Sum_probs=229.4
Q ss_pred EEEEcCCCchHHHHHHHHHhCC--CCcEEEEEecCC--chhHHHHHhcCCCCC-eEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512 45 VAILGAAGGIGQPLAMLMKINP--LVSVLHLYDVVN--TPGVTADISHMDTGA-VVRGFLGQPQLENALTGMDLVIIPAG 119 (354)
Q Consensus 45 I~IiGa~G~vG~~~a~~l~~~~--~~~ei~L~D~~~--~~g~~~dl~~~~~~~-~v~~~~~~~d~~~al~~aDvVIi~ag 119 (354)
|+||||+|.+|+++++.|+..+ ...+|+|+|+++ +++.++|++|+.... ..+.. .++|++++++|||+||+++|
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~-~~~d~~~~~~~aDiVv~t~~ 79 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVS-ITDDPYEAFKDADVVIITAG 79 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEE-ECCchHHHhCCCCEEEECCC
Confidence 6899998999999999999988 778999999987 688999999875432 23332 35677899999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEeccchHHHHHHHH
Q 018512 120 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFV 199 (354)
Q Consensus 120 ~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~t~ld~~r~~~~l 199 (354)
.++++|++|.+++.+|++++++++++|+++||++|+|++|||+|++|+++ ++++|+|++|+||+|.+|+.|+++.+
T Consensus 80 ~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~~i~~tNP~d~~t~~~----~~~sg~~~~kviG~~~ld~~r~~~~l 155 (263)
T cd00650 80 VGRKPGMGRLDLLKRNVPIVKEIGDNIEKYSPDAWIIVVSNPVDIITYLV----WRYSGLPKEKVIGLGTLDPIRFRRIL 155 (263)
T ss_pred CCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHH----HHHhCCCchhEEEeecchHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998654 78889999999999559999999999
Q ss_pred HHHhCCCCCCCcceEEeecCCccccccccccCCCCCCChHHHHHHHHHHhcchhHHHhhhccCCcchhhHHHHHHHHHHH
Q 018512 200 AEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADA 279 (354)
Q Consensus 200 a~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~~~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~s~A~a~~~ii~s 279 (354)
|+++|+++++|+++|||+||+ +++|+||+++ +|.++++++++
T Consensus 156 a~~l~v~~~~v~~~v~G~hg~-~~~~~~s~~~-------------------------------------~a~~~~~ii~a 197 (263)
T cd00650 156 AEKLGVDPDDVKVYILGEHGG-SQVPDWSTVR-------------------------------------IATSIADLIRS 197 (263)
T ss_pred HHHhCCCccceEEEEEEcCCC-ceEeccccch-------------------------------------HHHHHHHHHHH
Confidence 999999999999999999999 8999999765 67899999999
Q ss_pred HHhccCCCCcEEEee-eeeccC--CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHHHHH
Q 018512 280 CLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSI 345 (354)
Q Consensus 280 i~~~~~~~~~v~~~~-~~~g~~--~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~ 345 (354)
|++|++ .++|++ +++|+| +++++||+||++|++|+++++++ +|+++|+++|+++++.++..+
T Consensus 198 i~~~~~---~~~~v~v~~~g~ygi~~~~~~s~P~~i~~~Gi~~~~~~-~l~~~e~~~l~~s~~~~~~~~ 262 (263)
T cd00650 198 LLNDEG---EILPVGVRNNGQIGIPDDVVVSVPCIVGKNGVEEPIEV-GLTDFELEKLQKSADTLKKEL 262 (263)
T ss_pred HHcCCC---EEEEEEEEeCCccCCcCCEEEEEEEEEeCCceEEEecC-CCCHHHHHHHHHHHHHHHHHh
Confidence 999864 488887 568998 58999999999999999999995 999999999999999999764
No 35
>KOG1496 consensus Malate dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=1.8e-46 Score=332.79 Aligned_cols=304 Identities=25% Similarity=0.351 Sum_probs=273.0
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCC-----CCcEEEEEecCC----chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCC
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINP-----LVSVLHLYDVVN----TPGVTADISHMDTGAVVRGFLGQPQLENALTGM 111 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~-----~~~ei~L~D~~~----~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~a 111 (354)
++.+|.|+||+|.+|+++++.++... ....++|+|+.+ ++|..++|+++.. |.++.+..++|..++|+|.
T Consensus 3 epirVlVtGAAGqI~ysll~~ia~G~vfG~dQPiiL~lLdi~~~~~~LegV~mELqD~a~-PlL~~Vvattd~~~afkdv 81 (332)
T KOG1496|consen 3 EPIRVLVTGAAGQIGYSLLPMIARGIVFGKDQPIILHLLDIPPMMSVLEGVKMELQDCAL-PLLKGVVATTDEVEAFKDV 81 (332)
T ss_pred CceEEEeecccchhhHHHHHHHcCceeecCCCceEEEeeCCchHHHHHHHHHHHHHhhhh-hHHHhhhcccChhhhhccC
Confidence 46699999999999999999997631 124899999987 6899999999974 6666655677888999999
Q ss_pred cEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEeccc
Q 018512 112 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTML 190 (354)
Q Consensus 112 DvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~t~l 190 (354)
|+.|..++.|+++||+|.|++..|+++++..+..+.+|+ |+.+|+++.||++..+.++ .++++.+|.+++-++|.|
T Consensus 82 ~~ailvGa~PR~eGMERkDll~~NvkIfk~Qg~AL~k~A~~~~KVlVVgNPaNTNali~---~k~ApsIP~kNfs~lTRL 158 (332)
T KOG1496|consen 82 DVAILVGAMPRREGMERKDLLSANVKIFKSQGAALEKYAKPNVKVLVVGNPANTNALIL---KKFAPSIPEKNFSALTRL 158 (332)
T ss_pred cEEEEeccccCcccchhhhHHhhcceeehhhhHHHHHhcCCCceEEEecCccccchhHH---hhhCCCCchhcchhhhhh
Confidence 999999999999999999999999999999999999998 8999999999999998765 366789999999999999
Q ss_pred hHHHHHHHHHHHhCCCCCCC-cceEEeecCCccccccccccCCCC---------CCChHHH--HHHHHHHhcchhHHHhh
Q 018512 191 DVVRANTFVAEVLGLDPRDV-DVPVVGGHAGVTILPLLSQVKPPC---------SFTQEET--EYLTNRIQNGGTEVVEA 258 (354)
Q Consensus 191 d~~r~~~~la~~l~v~~~~v-~~~v~G~hg~~~~vp~~s~~~v~~---------~~~~~~~--~~i~~~v~~~~~~i~~~ 258 (354)
|.+|...++|.++||+.++| +..+||+|+. +|+|+..++++.. .++|+.| .++...|++|+.-+++.
T Consensus 159 DhNRA~~QlA~klgv~~~~VkNviIWGNHSs-TQyPD~~hA~V~~~~~~~~v~e~v~d~~wL~g~Fi~tVQkRGaavi~a 237 (332)
T KOG1496|consen 159 DHNRALAQLALKLGVPVSDVKNVIIWGNHSS-TQYPDVNHATVNTNGGEKPVKEAVKDDAWLQGEFIETVQKRGAAVIKA 237 (332)
T ss_pred chhhHHHHHHHhhCCchhhcceeEEeccccc-ccCCCccceeeeccCCcccHHHHhccchhhccchhhHHHhcchHhhhh
Confidence 99999999999999999999 7999999999 9999999998742 2566666 68999999999999997
Q ss_pred hccCCcchhhHHHHHHHHHHHHHhccCCCCcEEEee-eeeccC--CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHH
Q 018512 259 KAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLE 335 (354)
Q Consensus 259 ~~~kg~~~~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~--~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~ 335 (354)
+ |.++.+|.|.++++++++|+.+++.+. +++++ +.+|.| |++..||+||++ ++|-|++++..+++++-++++.
T Consensus 238 r--k~SSA~SaA~aacDhi~dw~~gTpeG~-fvSmgV~sDGsYgip~gli~SfPv~~-k~g~wkiVqgl~iddf~r~km~ 313 (332)
T KOG1496|consen 238 R--KLSSAMSAAKAACDHIRDWWFGTPEGT-FVSMGVYSDGSYGIPDGLIFSFPVTI-KNGDWKIVQGLPIDDFSREKMD 313 (332)
T ss_pred h--hhhhhhhHHHhHhhhhhheecCCCCcc-EEEEeeecCCCCCCCCCeEEEcceEe-cCCceEEEcCcchhHHHHHhhh
Confidence 5 678999999999999999999998764 77887 679999 899999999999 7899999998899999999999
Q ss_pred HHHHHHHHHHHHhhhhhc
Q 018512 336 KAKKELAGSIQKGISFSK 353 (354)
Q Consensus 336 ~sa~~i~~~~~~~~~~~~ 353 (354)
.++++|.++.+.++..++
T Consensus 314 ~t~~EL~eEkd~a~~~l~ 331 (332)
T KOG1496|consen 314 LTAKELKEEKDLAYSCLS 331 (332)
T ss_pred hhHHHHHHhHHHHHHhhc
Confidence 999999999999998765
No 36
>PF02866 Ldh_1_C: lactate/malate dehydrogenase, alpha/beta C-terminal domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR022383 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the C-terminal, and is thought to be an is an unusual alpha+beta fold.; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0055114 oxidation-reduction process; PDB: 4MDH_B 5MDH_A 1GV0_A 1GUZ_D 2EWD_B 2FRM_D 2FNZ_B 2FN7_B 2FM3_A 1LTH_T ....
Probab=100.00 E-value=5.9e-33 Score=244.24 Aligned_cols=159 Identities=35% Similarity=0.552 Sum_probs=145.2
Q ss_pred ccchHHHHHHHHHHHhCCCCCCCcceEEeecCCccccccccccCCC-----------CCCChHHHHHHHHHHhcchhHHH
Q 018512 188 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPP-----------CSFTQEETEYLTNRIQNGGTEVV 256 (354)
Q Consensus 188 t~ld~~r~~~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~-----------~~~~~~~~~~i~~~v~~~~~~i~ 256 (354)
|.||++||++++|+++|++|.+++++||||||+ ++||+||++++. ..++++++++|.+++++++++|+
T Consensus 1 T~LDs~R~~~~la~~l~v~~~~v~~~ViGeHg~-s~~~~~S~~~v~g~pl~~~~~~~~~~~~~~~~~l~~~v~~~g~~ii 79 (174)
T PF02866_consen 1 TMLDSARFRYFLAEKLGVNPSSVNAYVIGEHGD-SQVPDWSHAKVGGVPLLSYAKPSGKLSEEELEELTERVRKAGYEII 79 (174)
T ss_dssp THHHHHHHHHHHHHHHTSGGGGEEEEEEBSSST-TEEEEGGGEEETTEEHHHHHHTTTSSSHHHHHHHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHCcCccceEEEEEecCCc-ceeeeeecccccccccccccccccchhHHhhhccccccEeccceee
Confidence 679999999999999999999999999999999 999999999874 23667788999999999999999
Q ss_pred hhhccCCcchhhHHHHHHHHHHHHHhccCCCCcEEEee-eeeccC-CCc--cEEEEeEEEcCCCeEEeccCCCCCHHHHH
Q 018512 257 EAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TEL--PFFASKVRLGRQGAEEIFQLGPLNEYERI 332 (354)
Q Consensus 257 ~~~~~kg~~~~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~-~~~--~~~svPv~ig~~Gv~~i~~~~~L~~~E~~ 332 (354)
+.|. |+++||+|.++++++++|++|++ .++|++ +.+|+| .++ +|||+||+||++|++++++.++|+++|++
T Consensus 80 ~~k~--g~t~~s~A~a~~~~v~ail~~~~---~i~~~sv~~~g~yg~~~~~v~~s~P~~ig~~Gv~~i~~~~~L~~~E~~ 154 (174)
T PF02866_consen 80 KAKG--GSTSYSIAAAAARIVEAILKDER---RILPVSVYLDGEYGIPDGCVYFSVPVVIGKNGVEKIVEDLPLSEEEQE 154 (174)
T ss_dssp HHHS--SSCHHHHHHHHHHHHHHHHTTHT---EEEEEEEEEESGGGEESSSEEEEEEEEEETTEEEEEECSBSSTHHHHH
T ss_pred eecc--ccCcCCHHHHHHHHHHHHhhccc---ccccceeccccccCcccccceecceEEEcCCeeEEEeCCCCCCHHHHH
Confidence 9652 89999999999999999999985 488998 679999 334 99999999999999999984499999999
Q ss_pred HHHHHHHHHHHHHHHhhhhh
Q 018512 333 GLEKAKKELAGSIQKGISFS 352 (354)
Q Consensus 333 ~l~~sa~~i~~~~~~~~~~~ 352 (354)
+|++|++.|++.++.+++|+
T Consensus 155 ~l~~sa~~l~~~i~~~~~f~ 174 (174)
T PF02866_consen 155 KLKESAKELKKEIEKGLEFV 174 (174)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999986
No 37
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=99.97 E-value=1.3e-31 Score=227.67 Aligned_cols=139 Identities=38% Similarity=0.602 Sum_probs=123.1
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCC
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV 120 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~ 120 (354)
|||+||||+|+||+++++.|+..++.+||+|+|+++ ++|+++||+|+.............+ +++++|||+||+++|.
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~-~~~~~~aDivvitag~ 79 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGD-YEALKDADIVVITAGV 79 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESS-GGGGTTESEEEETTST
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccccc-ccccccccEEEEeccc
Confidence 799999999999999999999999999999999996 7999999999864332222222234 6889999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEE
Q 018512 121 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLG 186 (354)
Q Consensus 121 ~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG 186 (354)
++++|++|.|++..|+++++++++++++++|+++++++|||+|+++++ +++.+++|++|+||
T Consensus 80 ~~~~g~sR~~ll~~N~~i~~~~~~~i~~~~p~~~vivvtNPvd~~t~~----~~~~s~~~~~kviG 141 (141)
T PF00056_consen 80 PRKPGMSRLDLLEANAKIVKEIAKKIAKYAPDAIVIVVTNPVDVMTYV----AQKYSGFPPNKVIG 141 (141)
T ss_dssp SSSTTSSHHHHHHHHHHHHHHHHHHHHHHSTTSEEEE-SSSHHHHHHH----HHHHHTSSGGGEEE
T ss_pred cccccccHHHHHHHhHhHHHHHHHHHHHhCCccEEEEeCCcHHHHHHH----HHHhhCcCcccCcC
Confidence 999999999999999999999999999999999999999999988765 58889999999998
No 38
>cd05197 GH4_glycoside_hydrolases Glycoside Hydrases Family 4. Glycoside hydrolases cleave glycosidic bonds to release smaller sugars from oligo- or polysaccharides. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP-PTS). After translocation, these phospho-disaccharides may be hydrolyzed by GH4 glycoside hydrolases. Other organisms (such as archaea and Thermotoga maritima) lack the PEP-PTS system, but have several enzymes normally associated with the PEP-PTS operon. GH4 family members include 6-phospho-beta-glucosidases, 6-phospho-alpha-glucosidases, alpha-glucosidases/alpha-glucuronidases (only from Thermotoga), and alpha-galactosidases. They require two cofactors, NAD+ and a divalent metal (Mn2+, Ni2+, Mg2+), for activity. Some also require reducing conditions. GH4 glycoside hydrolases are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families in
Probab=99.97 E-value=1.2e-29 Score=251.14 Aligned_cols=291 Identities=20% Similarity=0.181 Sum_probs=191.6
Q ss_pred CeEEEEcCCCch-HHHHHHHHHhCC---CCcEEEEEecCC-chh----HHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcE
Q 018512 43 FKVAILGAAGGI-GQPLAMLMKINP---LVSVLHLYDVVN-TPG----VTADISHMDTGAVVRGFLGQPQLENALTGMDL 113 (354)
Q Consensus 43 ~kI~IiGa~G~v-G~~~a~~l~~~~---~~~ei~L~D~~~-~~g----~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDv 113 (354)
|||+|||| |+. ...+...|+... ..+||+|+|+++ ... .+..+.+.. ...++.. .|+|+++|++||||
T Consensus 1 ~KI~iIGg-GS~~tp~li~~l~~~~~~l~~~ei~L~Did~~Rl~~v~~l~~~~~~~~-g~~~~v~-~ttD~~~Al~gADf 77 (425)
T cd05197 1 VKIAIIGG-GSSFTPELVSGLLKTPEELPISEVTLYDIDEERLDIILTIAKRYVEEV-GADIKFE-KTMDLEDAIIDADF 77 (425)
T ss_pred CEEEEECC-chHhHHHHHHHHHcChhhCCCCEEEEEcCCHHHHHHHHHHHHHHHHhh-CCCeEEE-EeCCHHHHhCCCCE
Confidence 69999999 754 112344555443 358999999998 222 223333222 2345543 36799999999999
Q ss_pred EEEcCCC------------CCCCCC--------CHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHH
Q 018512 114 VIIPAGV------------PRKPGM--------TRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVF 173 (354)
Q Consensus 114 VIi~ag~------------~~~~g~--------~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~ 173 (354)
||.+..+ |.+.|. -......+|+++++++++.|+++||++|+|++|||+|++|+++
T Consensus 78 Vi~~irvGg~~~r~~De~Iplk~G~~gqeT~G~GG~~~alrni~ii~~i~~~i~~~~P~a~lin~TNP~di~t~a~---- 153 (425)
T cd05197 78 VINQFRVGGLTYREKDEQIPLKYGVIGQETVGPGGTFSGLRQIPYVLDIARKXEKLSPDAWYLNFTNPAGEVTEAV---- 153 (425)
T ss_pred EEEeeecCChHHHHHHHhHHHHcCcccccccCcchhhhhhhhHHHHHHHHHHHHHhCCCcEEEecCChHHHHHHHH----
Confidence 9997432 223331 1345678999999999999999999999999999999998654
Q ss_pred HHhCCCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEEe-ecCC---------cccccc-----------------
Q 018512 174 KKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG-GHAG---------VTILPL----------------- 226 (354)
Q Consensus 174 ~~~~~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~G-~hg~---------~~~vp~----------------- 226 (354)
++. +|+.||||+|.. +.|+++.+|+.+|+++++|+++++| ||+. .+..|.
T Consensus 154 ~~~--~p~~rviG~c~~-~~r~~~~ia~~lgv~~~~v~~~v~GlnHg~~~s~~~~~G~~l~p~l~~~~~~~~~~~~~~~~ 230 (425)
T cd05197 154 RRY--VPPEKAVGLCNV-PIGVMEIVAKLLGESEEKVDWQYAGLNHGIWLNRVRYNGGDVTPKLDEWVEEKSKDWKTENP 230 (425)
T ss_pred HHh--CCCCcEEEECCC-HHHHHHHHHHHhCCCHHHeEEEEEeccCeEeeEeEEECCeecHHHHHHHHhccCcccccccc
Confidence 666 377899999876 8899999999999999999999999 9974 011111
Q ss_pred -------cccc------CCCCC------CCh----H-------------HHHHHHHHHhcchhHHHh-----hhccCCcc
Q 018512 227 -------LSQV------KPPCS------FTQ----E-------------ETEYLTNRIQNGGTEVVE-----AKAGAGSA 265 (354)
Q Consensus 227 -------~s~~------~v~~~------~~~----~-------------~~~~i~~~v~~~~~~i~~-----~~~~kg~~ 265 (354)
|... .+|+. +.+ + +..+..+++.+....... ....++..
T Consensus 231 ~~~~~~~~~~~~~~~~g~~p~~Yl~yy~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~~~~~~~~~~~~~~~~~r~~~ 310 (425)
T cd05197 231 FVDQLSPAAIDFYRFYGVLPNPYLRYYLSWDKXRKLEADKEITWKTRADEVGKVEKELFEVYKFIKENPSVVELIKRGGR 310 (425)
T ss_pred ccccccchHHHHHHhCCCcccCCccccCccchhhhhhHHhhcccCccHHHHHHHHHHHHHHHhhhhhcCChhhhhhcCCc
Confidence 1100 00110 010 0 001111111110000000 00001223
Q ss_pred hhhHHHHHHHHHHHHHhccCCCCcEEEeee-eeccC---CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHH
Q 018512 266 TLSMAYAAVKFADACLRGLRGDAGVVECAF-VASQV---TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKEL 341 (354)
Q Consensus 266 ~~s~A~a~~~ii~si~~~~~~~~~v~~~~~-~~g~~---~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i 341 (354)
.|+ ..+++++++|.+|++. ++.+++ .+|.+ |+|.++++||+++++|+.++.- ++|++..+++++.-...-
T Consensus 311 ~~~--e~a~~ii~ai~~~~~~---~~~vNv~N~G~I~nLp~d~vVEvp~~v~~~Gi~P~~v-g~lp~~~~~Li~~~~~~e 384 (425)
T cd05197 311 KYS--EAAIPLIRALLNDNGA---RFVVNTRNNGAIANIDDDVVVEVPCLVDKNGPHPIKV-GPLDRFVKGLLRQRKMRE 384 (425)
T ss_pred ccH--HHHHHHHHHHHcCCCe---EEEEECCCCCCCCCCCCCCEEEEeEEEcCCCceeccc-CCCCHHHHHHHHHHHHHH
Confidence 344 7889999999999763 555554 57776 8899999999999999999866 699998888877755544
Q ss_pred HHHHHHhh
Q 018512 342 AGSIQKGI 349 (354)
Q Consensus 342 ~~~~~~~~ 349 (354)
+-.++.++
T Consensus 385 ~l~veAa~ 392 (425)
T cd05197 385 RLALEAFL 392 (425)
T ss_pred HHHHHHHH
Confidence 44454443
No 39
>PRK15076 alpha-galactosidase; Provisional
Probab=99.97 E-value=1.2e-29 Score=251.93 Aligned_cols=291 Identities=17% Similarity=0.146 Sum_probs=196.0
Q ss_pred CCeEEEEcCCCchHHHHHH--HHH-hCCCC-cEEEEEecCC--ch-hHHHHHhcCC--CCCeEEEEeCCCcHHhhhCCCc
Q 018512 42 GFKVAILGAAGGIGQPLAM--LMK-INPLV-SVLHLYDVVN--TP-GVTADISHMD--TGAVVRGFLGQPQLENALTGMD 112 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~--~l~-~~~~~-~ei~L~D~~~--~~-g~~~dl~~~~--~~~~v~~~~~~~d~~~al~~aD 112 (354)
++||+|||| |++|++.+. .++ ..++. .||+|+|+++ ++ +... +.+.. .....+.. .++|+++|++|||
T Consensus 1 ~~KIaIIGa-Gsvg~~~~~~~~i~~~~~l~~~evvLvDid~er~~~~~~l-~~~~~~~~~~~~~i~-~ttD~~eal~dAD 77 (431)
T PRK15076 1 MPKITFIGA-GSTVFTKNLLGDILSVPALRDAEIALMDIDPERLEESEIV-ARKLAESLGASAKIT-ATTDRREALQGAD 77 (431)
T ss_pred CcEEEEECC-CHHHhHHHHHHHHhhCccCCCCEEEEECCCHHHHHHHHHH-HHHHHHhcCCCeEEE-EECCHHHHhCCCC
Confidence 369999999 999998876 665 34443 5999999987 22 2222 33321 12233432 3578889999999
Q ss_pred EEEEcCCCC-CCCC--------------CCHHHH--------HHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHH
Q 018512 113 LVIIPAGVP-RKPG--------------MTRDDL--------FNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIA 169 (354)
Q Consensus 113 vVIi~ag~~-~~~g--------------~~r~d~--------~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~ 169 (354)
|||++++.+ .+++ ++|.|. +.+|++++++++++|+++||++|+|++|||+|++|+.+
T Consensus 78 fVv~ti~vg~~~~~~~~De~Iplk~G~~~~r~et~G~GG~~~~~r~i~~i~~i~~~i~~~~p~a~iin~tNP~divt~~~ 157 (431)
T PRK15076 78 YVINAIQVGGYEPCTVTDFEIPKKYGLRQTIGDTLGIGGIMRALRTIPVLLDICEDMEEVCPDALLLNYVNPMAMNTWAM 157 (431)
T ss_pred EEeEeeeeCCcchhhhhhhhhHHHcCCeeecccCcCccchhhhhhhHHHHHHHHHHHHHHCCCeEEEEcCChHHHHHHHH
Confidence 999998876 3434 445566 89999999999999999999999999999999997643
Q ss_pred HHHHHHhCCCCCCCEEEecc--chHHHHHHHHHHHhCCCCCCCcceEEe-ecCC---------ccccccccc---c----
Q 018512 170 AEVFKKAGTYDPKKLLGVTM--LDVVRANTFVAEVLGLDPRDVDVPVVG-GHAG---------VTILPLLSQ---V---- 230 (354)
Q Consensus 170 ~~~~~~~~~~p~~kviG~t~--ld~~r~~~~la~~l~v~~~~v~~~v~G-~hg~---------~~~vp~~s~---~---- 230 (354)
+ ++|+.||||+|+ +++ .+.+|+.+|+++++|++++.| ||.. ++.+|.... .
T Consensus 158 ----~---~~~~~rviG~c~~~~~~---~~~ia~~l~v~~~~v~~~~~GlNH~~W~~~~~~~G~D~~p~l~~~~~~~~~~ 227 (431)
T PRK15076 158 ----N---RYPGIKTVGLCHSVQGT---AEQLARDLGVPPEELRYRCAGINHMAWYLELERKGEDLYPELRAAAAEGQTR 227 (431)
T ss_pred ----h---cCCCCCEEEECCCHHHH---HHHHHHHhCCCHHHeEEEEEeecchhhheeeeECCcchHHHHHHHHhccCch
Confidence 4 678899999983 554 489999999999999999999 4432 133432110 0
Q ss_pred ---CC-----------CC-----------CC----ChHHHHHHHH----HH------hcchhHHH-hhhccCCcchhhHH
Q 018512 231 ---KP-----------PC-----------SF----TQEETEYLTN----RI------QNGGTEVV-EAKAGAGSATLSMA 270 (354)
Q Consensus 231 ---~v-----------~~-----------~~----~~~~~~~i~~----~v------~~~~~~i~-~~~~~kg~~~~s~A 270 (354)
.+ +. .+ .++..+++.. .. .....+.+ +.+.++..-.-..+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~~y~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (431)
T PRK15076 228 CQDKVRYEMLKRFGYFVTESSEHFAEYVPWFIKPGRPDLIERFNIPLDEYPRRCEEQIANWEKEREELANAERIEIKRSR 307 (431)
T ss_pred hcccccHHHHHHhCCCcccchhhhhhhhcccCcCCCHHHHHHhhcccchhhhhHHHHhhhHHHHHHHhhCCCccccccch
Confidence 01 00 11 2222222221 00 11111111 11111111001134
Q ss_pred HHHHHHHHHHHhccCCCCcEEEeee-eeccC---CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHHHHHH
Q 018512 271 YAAVKFADACLRGLRGDAGVVECAF-VASQV---TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQ 346 (354)
Q Consensus 271 ~a~~~ii~si~~~~~~~~~v~~~~~-~~g~~---~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~~ 346 (354)
..+++++++|.+|.+. ++.+++ .+|.+ |+|.++++||+++++|+.++.- ++|++..+++++.-...-+-.++
T Consensus 308 e~a~~ii~ai~~~~~~---~~~vnv~N~G~I~~Lp~d~vVEvp~~v~~~G~~P~~~-g~lP~~~~~l~~~~~~~e~l~ve 383 (431)
T PRK15076 308 EYASTIIEAIETGEPS---VIYGNVRNNGLIDNLPQGCCVEVPCLVDRNGIQPTKV-GDLPPQLAALNRTNINVQELTVE 383 (431)
T ss_pred HHHHHHHHHHhcCCce---EEEEECCCCCcCCCCCCCCEEEEeEEEcCCcceeeec-CCCCHHHHHHHHHHHHHHHHHHH
Confidence 7899999999988763 555554 46776 8899999999999999999876 69999999988776555555555
Q ss_pred Hhh
Q 018512 347 KGI 349 (354)
Q Consensus 347 ~~~ 349 (354)
.++
T Consensus 384 Aa~ 386 (431)
T PRK15076 384 AAL 386 (431)
T ss_pred HHH
Confidence 443
No 40
>cd05296 GH4_P_beta_glucosidase Glycoside Hydrolases Family 4; Phospho-beta-glucosidase. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP-PTS). After translocation, these phospho-disaccharides may be hydrolyzed by the GH4 glycoside hydrolases such as the phospho-beta-glucosidases. Other organisms (such as archaea and Thermotoga maritima ) lack the PEP-PTS system, but have several enzymes normally associated with the PEP-PTS operon. The 6-phospho-beta-glucosidase from Thermotoga maritima hydrolylzes cellobiose 6-phosphate (6P) into glucose-6P and glucose, in an NAD+ and Mn2+ dependent fashion. The Escherichia coli 6-phospho-beta-glucosidase (also called celF) hydrolyzes a variety of phospho-beta-glucosides including cellobiose-6P, salicin-6P, arbutin-6P, and gentobiose-6P. Phospho-beta-glucosidases are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein
Probab=99.97 E-value=2.8e-29 Score=248.00 Aligned_cols=286 Identities=19% Similarity=0.224 Sum_probs=193.6
Q ss_pred CeEEEEcCCCchHH-HHHHHHHhC-C--CCcEEEEEecC-C--chh---HHHHHhcCCCCCeEEEEeCCCcHHhhhCCCc
Q 018512 43 FKVAILGAAGGIGQ-PLAMLMKIN-P--LVSVLHLYDVV-N--TPG---VTADISHMDTGAVVRGFLGQPQLENALTGMD 112 (354)
Q Consensus 43 ~kI~IiGa~G~vG~-~~a~~l~~~-~--~~~ei~L~D~~-~--~~g---~~~dl~~~~~~~~v~~~~~~~d~~~al~~aD 112 (354)
|||+|||| |++-. .+...|+.. . ..++|+|+|++ + +.. .+.++.... .+.++.. .|+|+++|++|||
T Consensus 1 ~KI~iIGa-GS~~tp~li~~l~~~~~~l~~~ei~L~Did~~~rl~~v~~~~~~~~~~~-~~~~~v~-~t~d~~~al~gad 77 (419)
T cd05296 1 MKLTIIGG-GSSYTPELIEGLIRRYEELPVTELVLVDIDEEEKLEIVGALAKRMVKKA-GLPIKVH-LTTDRREALEGAD 77 (419)
T ss_pred CEEEEECC-chHhHHHHHHHHHhccccCCCCEEEEecCChHHHHHHHHHHHHHHHHhh-CCCeEEE-EeCCHHHHhCCCC
Confidence 69999999 76522 234455553 2 35899999999 5 211 122232222 2334443 3679999999999
Q ss_pred EEEEcCCCCCCCCCCHHH--------------------HHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHH
Q 018512 113 LVIIPAGVPRKPGMTRDD--------------------LFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEV 172 (354)
Q Consensus 113 vVIi~ag~~~~~g~~r~d--------------------~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~ 172 (354)
|||++++.++.+++++++ ...+|+++++++++.|+++||++|+|++|||++++|+.
T Consensus 78 fVi~~~~vg~~~~r~~de~i~~~~Gi~gqET~G~GG~~~a~rni~ii~~i~~~i~~~~Pda~lin~TNP~~ivt~a---- 153 (419)
T cd05296 78 FVFTQIRVGGLEARALDERIPLKHGVIGQETTGAGGFAKALRTIPVILDIAEDVEELAPDAWLINFTNPAGIVTEA---- 153 (419)
T ss_pred EEEEEEeeCCcchhhhhhhhHHHcCCccccCCCcchHHHhhhhHHHHHHHHHHHHHHCCCeEEEEecCHHHHHHHH----
Confidence 999998776555444333 47899999999999999999999999999999999754
Q ss_pred HHHhCCCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEEe-ecCC---------cccccc----------------
Q 018512 173 FKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG-GHAG---------VTILPL---------------- 226 (354)
Q Consensus 173 ~~~~~~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~G-~hg~---------~~~vp~---------------- 226 (354)
+++.+ +.||||+|..+ .|+++.+|+.+|+++++|+++++| ||.. ++.+|.
T Consensus 154 ~~k~~---~~rviGlc~~~-~r~~~~ia~~lg~~~~~v~~~v~GlNH~~w~~~~~~~G~D~~p~l~~~~~~~~~~~~~~~ 229 (419)
T cd05296 154 VLRHT---GDRVIGLCNVP-IGLQRRIAELLGVDPEDVFIDYAGLNHLGWLRRVLLDGEDVLPELLEDLAALLSFEEGLL 229 (419)
T ss_pred HHHhc---cCCEEeeCCcH-HHHHHHHHHHhCCCHHHceEEEEecccceeeeeeeECCcccHHHHHHHhhhccccccccc
Confidence 46765 67999999874 799999999999999999999999 8755 244541
Q ss_pred cccc------CCCCC------CChHHHH--------------HHHHHH----hcch----hHHHhhhccCCcchhhHHHH
Q 018512 227 LSQV------KPPCS------FTQEETE--------------YLTNRI----QNGG----TEVVEAKAGAGSATLSMAYA 272 (354)
Q Consensus 227 ~s~~------~v~~~------~~~~~~~--------------~i~~~v----~~~~----~~i~~~~~~kg~~~~s~A~a 272 (354)
|+.. .+|+. +.++..+ ++.+++ ++.. .+.+. .++...|+ ..
T Consensus 230 ~~~~~~~~~g~~p~~Yl~yy~~~~~~~~~~~~~~~~r~e~~~~~~~~l~~~~~~~~~~~~~~~~~---~r~g~~y~--e~ 304 (419)
T cd05296 230 FGPELLRALGALPNEYLRYYYQTDEALEEILEAAGTRGEVVKEVEKELFELYKDPNLDEKPKELE---KRGGAGYS--EA 304 (419)
T ss_pred hHHHHHHhcCCcccchHHHHCCcHHHHHHhhhhccchHHHHHHHHHHHHHHHhccccccChHhhH---hhcCcchH--HH
Confidence 1111 01110 1121111 111111 1110 00001 12233344 78
Q ss_pred HHHHHHHHHhccCCCCcEEEeee-eeccC---CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 018512 273 AVKFADACLRGLRGDAGVVECAF-VASQV---TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKG 348 (354)
Q Consensus 273 ~~~ii~si~~~~~~~~~v~~~~~-~~g~~---~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~~~~ 348 (354)
+++++++|.+|.+. ++.+++ .+|.+ |+|.++++||.++++|+.++.- ++|++...++++.-...=+-.++.+
T Consensus 305 a~~ii~ai~~~~~~---~~~vNv~N~G~I~~Lp~d~vVEvp~~v~~~G~~P~~v-g~lP~~~~~l~~~~~~~e~l~veAa 380 (419)
T cd05296 305 ALALISAIYNDKGD---IHVVNVRNNGAIPGLPDDAVVEVPCVVDADGAHPLPV-GPLPPAILGLIQQVKAYERLTIEAA 380 (419)
T ss_pred HHHHHHHHhcCCCc---EEEEECCCCCCCCCCCCCCEEEEeEEEcCCCceeccC-CCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999988763 444554 57776 8899999999999999999866 6999998888766544443344444
No 41
>cd05298 GH4_GlvA_pagL_like Glycoside Hydrolases Family 4; GlvA- and pagL-like glycosidases. Bacillus subtilis GlvA and Clostridium acetobutylicum pagL are 6-phospho-alpha-glucosidase, catalyzing the hydrolysis of alpha-glucopyranoside bonds to release glucose from oligosaccharides. The substrate specificities of other members of this subgroup are unknown. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP_PTS). After translocation, these phospho-disaccharides may be hydrolyzed by the GH4 glycoside hydrolases, which include 6-phospho-beta-glucosidases, 6-phospho-alpha-glucosidases, alpha-glucosidases/alpha-glucuronidases (only from Thermotoga), and alpha-galactosidases. Members of this subfamily are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductas
Probab=99.96 E-value=6.3e-28 Score=239.22 Aligned_cols=293 Identities=18% Similarity=0.221 Sum_probs=192.2
Q ss_pred CeEEEEcCCCch-HHHHHHHHHhCC--C-CcEEEEEecCC-chh----HHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcE
Q 018512 43 FKVAILGAAGGI-GQPLAMLMKINP--L-VSVLHLYDVVN-TPG----VTADISHMDTGAVVRGFLGQPQLENALTGMDL 113 (354)
Q Consensus 43 ~kI~IiGa~G~v-G~~~a~~l~~~~--~-~~ei~L~D~~~-~~g----~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDv 113 (354)
|||+|||| |+. +..+...|+... + .++|+|+|+++ ... .+..+.+.. ...++.. .|+|+++|++||||
T Consensus 1 ~KI~iIGa-GS~~tp~li~~l~~~~~~l~~~ei~L~DId~~rl~~v~~l~~~~~~~~-g~~~~v~-~Ttdr~eAl~gADf 77 (437)
T cd05298 1 FKIVIAGG-GSTYTPGIVKSLLDRKEDFPLRELVLYDIDAERQEKVAEAVKILFKEN-YPEIKFV-YTTDPEEAFTDADF 77 (437)
T ss_pred CeEEEECC-cHHHHHHHHHHHHhCcccCCCCEEEEECCCHHHHHHHHHHHHHHHHhh-CCCeEEE-EECCHHHHhCCCCE
Confidence 79999999 754 222344555542 3 58999999998 222 223333222 2345543 36799999999999
Q ss_pred EEEcCCC------------CCCCCC---C-----HHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHH
Q 018512 114 VIIPAGV------------PRKPGM---T-----RDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVF 173 (354)
Q Consensus 114 VIi~ag~------------~~~~g~---~-----r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~ 173 (354)
||.+..+ |.+.|. + ......||++++.++++.|+++||+||+|++|||++++|+. +
T Consensus 78 Vi~~irvGg~~~r~~De~Ip~kyGi~gqET~G~GG~~~alRtip~~~~i~~~i~~~~pda~lin~tNP~~~vt~~----~ 153 (437)
T cd05298 78 VFAQIRVGGYAMREQDEKIPLKHGVVGQETCGPGGFAYGLRSIGPMIELIDDIEKYSPDAWILNYSNPAAIVAEA----L 153 (437)
T ss_pred EEEEeeeCCchHHHHHHhHHHHcCcceecCccHHHHHHHHhhHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHH----H
Confidence 9997432 223332 1 34567899999999999999999999999999999999754 4
Q ss_pred HHhCCCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEEe-ecCC----------ccccccccc-------------
Q 018512 174 KKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG-GHAG----------VTILPLLSQ------------- 229 (354)
Q Consensus 174 ~~~~~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~G-~hg~----------~~~vp~~s~------------- 229 (354)
++. +|+.||||+|+... .++..+|+.+|+++++++..+.| ||.. ++.+|....
T Consensus 154 ~~~--~~~~kviGlC~~~~-~~~~~la~~lg~~~~~v~~~~~GlNH~~w~~~~~~~~G~D~~p~l~e~~~~~~~~~~~~~ 230 (437)
T cd05298 154 RRL--FPNARILNICDMPI-AIMDSMAAILGLDRKDLEPDYFGLNHFGWFTKIYDKQGEDLLPKLREHVKENGYLPPDSD 230 (437)
T ss_pred HHH--CCCCCEEEECCcHH-HHHHHHHHHhCCCHHHceEEEEeecchhhhhheEECCCCchHHHHHHHHhccCCCccccc
Confidence 555 77899999998754 47899999999999999999999 3322 133332110
Q ss_pred -c---C-------------------CCCC-----C-ChHH--------------HHHHHHHHhcchhHHHhhhccCCcch
Q 018512 230 -V---K-------------------PPCS-----F-TQEE--------------TEYLTNRIQNGGTEVVEAKAGAGSAT 266 (354)
Q Consensus 230 -~---~-------------------v~~~-----~-~~~~--------------~~~i~~~v~~~~~~i~~~~~~kg~~~ 266 (354)
. . +++. + .++- +++..+++.+...++.....-+....
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~g~~~p~~y~~yy~~~~~~~~~~~~~~~~~~e~~~~~~~~l~~~~~~~~~~~~~~~~~~ 310 (437)
T cd05298 231 EEHRDPSWNDTFANAKDMMADFPDYLPNTYLQYYLYPDYMVEHSNPNYTRANEVMDGREKRVFEECRKIIETGTAEGSTF 310 (437)
T ss_pred ccccccCchHHHHHHhhHHHhCCCcCCCchhhHhCChHHHHHHhccccccHHHHHHHHHHHHHHHHhhhhhcCChhhhhh
Confidence 0 0 1110 0 1110 11111111110000000000000011
Q ss_pred h--hHHHHHHHHHHHHHhccCCCCcEEEee-eeeccC---CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHH
Q 018512 267 L--SMAYAAVKFADACLRGLRGDAGVVECA-FVASQV---TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKE 340 (354)
Q Consensus 267 ~--s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~---~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~ 340 (354)
. ..|.++++++++|++|.+ .+++++ ..+|.| |+|+++|+||+||++|+.++.- ++|++...++++.-...
T Consensus 311 ~~~~ya~~a~~ii~aI~~d~~---~~~~vnv~n~G~i~nL~~d~~vevP~~v~~~Gi~pi~v-g~lP~~~~~l~~~~~~~ 386 (437)
T cd05298 311 HVDVHGEYIVDLAASIAYNTK---ERFLVIVENNGAIPNLPDDAMVEVPAYIGSNGPEPLVV-GKIPTFYKGLMEQQVAY 386 (437)
T ss_pred hccchHHHHHHHHHHHHcCCC---eEEEEEeecCCccCCCCCCcEEEEEEEEeCCCceeccc-CCCCHHHHHHHHHHHHH
Confidence 0 245889999999999876 478887 457887 6899999999999999999866 69999999887776555
Q ss_pred HHHHHHHhh
Q 018512 341 LAGSIQKGI 349 (354)
Q Consensus 341 i~~~~~~~~ 349 (354)
-+-.++.++
T Consensus 387 e~l~veAa~ 395 (437)
T cd05298 387 EKLLVEAYL 395 (437)
T ss_pred HHHHHHHHH
Confidence 555555443
No 42
>COG1486 CelF Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases [Carbohydrate transport and metabolism]
Probab=99.95 E-value=3.3e-26 Score=222.78 Aligned_cols=293 Identities=20% Similarity=0.248 Sum_probs=191.9
Q ss_pred CCCeEEEEcCCCchHHHH-H-HHHHhCC--CCcEEEEEecCC-chhH----HHHHhcCCCCCeEEEEeCCCcHHhhhCCC
Q 018512 41 AGFKVAILGAAGGIGQPL-A-MLMKINP--LVSVLHLYDVVN-TPGV----TADISHMDTGAVVRGFLGQPQLENALTGM 111 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~-a-~~l~~~~--~~~ei~L~D~~~-~~g~----~~dl~~~~~~~~v~~~~~~~d~~~al~~a 111 (354)
+.+||+|||| |+++..- . -.|...+ ...+|+|+|+++ .... +..+-+.. .+.++.. .++|+++|++||
T Consensus 2 ~~~KI~iIGg-GSt~tp~~v~g~l~~~e~l~~~el~L~Did~~r~~~i~~~~~~~v~~~-g~~~kv~-~ttd~~eAl~gA 78 (442)
T COG1486 2 KKFKIVIIGG-GSTYTPKLLLGDLARTEELPVRELALYDIDEERLKIIAILAKKLVEEA-GAPVKVE-ATTDRREALEGA 78 (442)
T ss_pred CcceEEEECC-CccccHHHHHHHHhcCccCCcceEEEEeCCHHHHHHHHHHHHHHHHhh-CCCeEEE-EecCHHHHhcCC
Confidence 4579999999 8776653 2 2333333 357999999997 2222 22232222 2335554 367899999999
Q ss_pred cEEEEcCCC------------CCCCCCC--------HHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHH
Q 018512 112 DLVIIPAGV------------PRKPGMT--------RDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAE 171 (354)
Q Consensus 112 DvVIi~ag~------------~~~~g~~--------r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~ 171 (354)
||||.+..+ |.+.|.. ..-...+++|++.+|++.|+++||+||++++|||+.++|.
T Consensus 79 dfVi~~~rvG~l~~r~~De~IplkyG~~gqET~G~GGi~~glRtIpvildi~~~m~~~~P~Aw~lNytNP~~~vTe---- 154 (442)
T COG1486 79 DFVITQIRVGGLEAREKDERIPLKHGLYGQETNGPGGIFYGLRTIPVILDIAKDMEKVCPNAWMLNYTNPAAIVTE---- 154 (442)
T ss_pred CEEEEEEeeCCcccchhhhccchhhCccccccccccHHHhhcccchHHHHHHHHHHHhCCCceEEeccChHHHHHH----
Confidence 999996432 3444422 2345578999999999999999999999999999999964
Q ss_pred HHHHhCCCCCCCEEEeccchHHHHHHHHHHHhCCCC-CCCcceEEe-ecCC---------cccccc--------------
Q 018512 172 VFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDP-RDVDVPVVG-GHAG---------VTILPL-------------- 226 (354)
Q Consensus 172 ~~~~~~~~p~~kviG~t~ld~~r~~~~la~~l~v~~-~~v~~~v~G-~hg~---------~~~vp~-------------- 226 (354)
++.+. +|..|+||+|+... .....+|+.||+++ ++++..+.| +|.. .+.+|.
T Consensus 155 Av~r~--~~~~K~VGlCh~~~-g~~~~lAe~L~~~~~~~l~~~~aGlNH~~w~~~~~~~G~d~~p~l~~~~~~~~~~~~~ 231 (442)
T COG1486 155 AVRRL--YPKIKIVGLCHGPI-GIAMELAEVLGLEPREDLRYRVAGLNHMVWILRVRDDGEDLYPELLEALEEGGSPSEP 231 (442)
T ss_pred HHHHh--CCCCcEEeeCCchH-HHHHHHHHHhCCCchhceeEEEeechhhhhhhHhhhcCccchHHHHHHHhccccCCcc
Confidence 45664 45459999998654 57899999999975 999999999 3322 122221
Q ss_pred ---------ccccC----C---CCC------CChH----HHHH------HHHHHhcchhHHHhhh------------ccC
Q 018512 227 ---------LSQVK----P---PCS------FTQE----ETEY------LTNRIQNGGTEVVEAK------------AGA 262 (354)
Q Consensus 227 ---------~s~~~----v---~~~------~~~~----~~~~------i~~~v~~~~~~i~~~~------------~~k 262 (354)
|.... . ++. +++. ...+ -.+++.++..+.++.+ ..+
T Consensus 232 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ra~ev~~re~~~~~~~~~~~~~~~p~~~~~~ 311 (442)
T COG1486 232 ENKNIQSPVWIDMFLKYGYPVLPSSYHRYYYYPYDMKEKKPDEIEKFGTRANEVMKREKELFELYKKPELKEKPEELEKR 311 (442)
T ss_pred ccccccCcchHHHHHHhCcCcccCcchhhheehHhhhhccchhhhhcCCCHHHHHHHHHHHHHHHhhhhhhcCchhhhhc
Confidence 11100 0 000 0000 0000 0111121111111110 112
Q ss_pred Ccc--hhhHHHHHHHHHHHHHhccCCCCcEEEeee-eeccC---CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHH
Q 018512 263 GSA--TLSMAYAAVKFADACLRGLRGDAGVVECAF-VASQV---TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEK 336 (354)
Q Consensus 263 g~~--~~s~A~a~~~ii~si~~~~~~~~~v~~~~~-~~g~~---~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~ 336 (354)
+.+ .|+ .+++++++||++|++. ++.+++ .+|.+ |+|.++++||.++++|++++.. ++|++.-+++++.
T Consensus 312 ~~~~~~~~--e~a~~ii~Ai~~~~~~---~~~vNv~N~G~I~nlp~D~vVEvpc~Vd~~Gi~P~~~-g~lP~~~~~l~~~ 385 (442)
T COG1486 312 IGAGKYSS--EYASNIINAIENNKPS---RIYVNVRNNGAITNLPDDAVVEVPCLVDRNGIHPLAV-GDLPEFVKGLMHT 385 (442)
T ss_pred CCcccccH--HHHHHHHHHHhcCCce---EEEEEcCCCccccCCCCCeEEEeeEEecCCCCccccc-CCCCHHHHHHHHH
Confidence 222 444 7789999999999864 555554 57876 8999999999999999999877 6999999999888
Q ss_pred HHHHHHHHHHHhh
Q 018512 337 AKKELAGSIQKGI 349 (354)
Q Consensus 337 sa~~i~~~~~~~~ 349 (354)
....-+-.++.++
T Consensus 386 ~i~~e~l~veA~~ 398 (442)
T COG1486 386 NINVEELTVEAAL 398 (442)
T ss_pred HHHHHHHHHHHHH
Confidence 7766655555443
No 43
>cd05297 GH4_alpha_glucosidase_galactosidase Glycoside Hydrolases Family 4; Alpha-glucosidases and alpha-galactosidases. linked to 3D####ucture
Probab=99.94 E-value=1.3e-25 Score=223.19 Aligned_cols=291 Identities=17% Similarity=0.147 Sum_probs=194.8
Q ss_pred CeEEEEcCCCchHHHHHH--HHHhC-CC-CcEEEEEecCC--chhHHHHHhcCC--CCCeEEEEeCCCcHHhhhCCCcEE
Q 018512 43 FKVAILGAAGGIGQPLAM--LMKIN-PL-VSVLHLYDVVN--TPGVTADISHMD--TGAVVRGFLGQPQLENALTGMDLV 114 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~--~l~~~-~~-~~ei~L~D~~~--~~g~~~dl~~~~--~~~~v~~~~~~~d~~~al~~aDvV 114 (354)
+||+|||| |++|++.+. .++.. .. ..+|+|+|+++ ++....++.+.. .....+.. .++|+++|++|||+|
T Consensus 1 ~KIaIIGa-Gs~G~a~a~~~~i~~~~~~~g~eV~L~Did~e~l~~~~~~~~~~~~~~~~~~~I~-~ttD~~eal~~AD~V 78 (423)
T cd05297 1 IKIAFIGA-GSVVFTKNLVGDLLKTPELSGSTIALMDIDEERLETVEILAKKIVEELGAPLKIE-ATTDRREALDGADFV 78 (423)
T ss_pred CeEEEECC-ChHHhHHHHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHhcCCCeEEE-EeCCHHHHhcCCCEE
Confidence 58999999 999999776 45433 33 34999999987 344444443321 11223332 357888999999999
Q ss_pred EEcCCCCCCCCCCH----------------------HHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHH
Q 018512 115 IIPAGVPRKPGMTR----------------------DDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEV 172 (354)
Q Consensus 115 Ii~ag~~~~~g~~r----------------------~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~ 172 (354)
|++++.....+.++ .....+|++.+.++++.++++||++|++++|||++++|++
T Consensus 79 i~ai~~~~~~~~~~de~i~~K~g~~~~~~~t~g~ggi~~~~~s~~~i~~ia~~i~~~~p~a~~i~~tNPv~i~t~~---- 154 (423)
T cd05297 79 INTIQVGGHEYTETDFEIPEKYGYYQTVGDTSGPGGIFRALRTIPVLLDIARDIEELCPDAWLLNYANPMAELTWA---- 154 (423)
T ss_pred EEeeEecCccchhhhhhhHHHcCeeeeccCCCcHHHHHHHHhhHHHHHHHHHHHHHHCCCCEEEEcCChHHHHHHH----
Confidence 99987654443332 4566889999999999999999999999999999999754
Q ss_pred HHHhCCCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEEe-ecCC---------ccccccccc-----------cC
Q 018512 173 FKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG-GHAG---------VTILPLLSQ-----------VK 231 (354)
Q Consensus 173 ~~~~~~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~G-~hg~---------~~~vp~~s~-----------~~ 231 (354)
+++.++ .|++|+|+. +.++++.+|+.+|+++++|+++++| ||.. ++.+|.... ..
T Consensus 155 ~~k~~~---~rviG~c~~-~~~~~~~~a~~l~~~~~~v~~~~~GlNH~~w~~~~~~~G~d~~p~l~~~~~~~~~~~~~~~ 230 (423)
T cd05297 155 LNRYTP---IKTVGLCHG-VQGTAEQLAKLLGEPPEEVDYQVAGINHMAWLLKFEYNGEDLYPLLDEWIEEGSEEWDQLS 230 (423)
T ss_pred HHHhCC---CCEEEECCc-HHHHHHHHHHHhCCCHHHeEEEEEeeccHhhhhhheECCcchHHHHHHHHhccCccchhcc
Confidence 477665 799999865 6789999999999999999999999 4422 234442111 11
Q ss_pred -CC-----------C-------C------CChHHHHHHH--------------HHHhcchh--HHHhh--hccCCcchhh
Q 018512 232 -PP-----------C-------S------FTQEETEYLT--------------NRIQNGGT--EVVEA--KAGAGSATLS 268 (354)
Q Consensus 232 -v~-----------~-------~------~~~~~~~~i~--------------~~v~~~~~--~i~~~--~~~kg~~~~s 268 (354)
++ . . ..++...... +....... ...+. ....+...|
T Consensus 231 ~~~~~~~~~~g~~p~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 309 (423)
T cd05297 231 PVRFDMYRRYGLFPTESSEHLSEYVPHYRKETKKIWYGEFNEDEYGGRDEEQGWEWYEERLKLILAEIDKEELDPVKRS- 309 (423)
T ss_pred cchHHHHHHcCCcccCcchhhhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHhhhhhccchhcchhccccccc-
Confidence 10 0 0 0111111100 00000000 00000 000111223
Q ss_pred HHHHHHHHHHHHHhccCCCCcEEEeee-eeccC---CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHHHH
Q 018512 269 MAYAAVKFADACLRGLRGDAGVVECAF-VASQV---TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGS 344 (354)
Q Consensus 269 ~A~a~~~ii~si~~~~~~~~~v~~~~~-~~g~~---~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~ 344 (354)
+..+++++++|.+|.+. ++.+++ .+|.+ |+|.++++||+|+++|+.++.. ++|++..+++++.-...-+-.
T Consensus 310 -~e~a~~ii~ai~~~~~~---~~~vnv~N~G~I~~Lp~d~vVEvp~~v~~~G~~p~~~-g~lp~~~~~l~~~~~~~e~l~ 384 (423)
T cd05297 310 -GEYASPIIEALVTGKPR---RINGNVPNNGLIPNLPDDVVVEVPALVDRNGIHPEKI-GPLPPQLAALIRPRINVQELA 384 (423)
T ss_pred -hHHHHHHHHHHhcCCce---EEEEECCCCCCCCCCCCCcEEEEeeEEcCCCceeccc-CCCCHHHHHHHHHHHHHHHHH
Confidence 36789999999998763 555554 57775 8899999999999999999876 699999998887765555545
Q ss_pred HHHhh
Q 018512 345 IQKGI 349 (354)
Q Consensus 345 ~~~~~ 349 (354)
++.++
T Consensus 385 veA~~ 389 (423)
T cd05297 385 VEAAL 389 (423)
T ss_pred HHHHH
Confidence 55443
No 44
>PF02056 Glyco_hydro_4: Family 4 glycosyl hydrolase; InterPro: IPR001088 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 4 GH4 from CAZY comprises enzymes with several known activities; 6-phospho-beta-glucosidase (3.2.1.86 from EC); 6-phospho-alpha-glucosidase (3.2.1.122 from EC); alpha-galactosidase (3.2.1.22 from EC). 6-phospho-alpha-glucosidase requires both NAD(H) and divalent metal (Mn2+, Fe2+, Co2+, or Ni2+) for activity [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1U8X_X 1S6Y_A 3FEF_B 1VJT_A 1UP4_A 1UP6_C 1UP7_E 1OBB_A.
Probab=99.83 E-value=7e-20 Score=160.87 Aligned_cols=152 Identities=22% Similarity=0.253 Sum_probs=104.3
Q ss_pred eEEEEcCCCchHHHH--HHHHHhCC-C-CcEEEEEecCC-ch----hHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEE
Q 018512 44 KVAILGAAGGIGQPL--AMLMKINP-L-VSVLHLYDVVN-TP----GVTADISHMDTGAVVRGFLGQPQLENALTGMDLV 114 (354)
Q Consensus 44 kI~IiGa~G~vG~~~--a~~l~~~~-~-~~ei~L~D~~~-~~----g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvV 114 (354)
||+|||| |++-+.. ...+...+ + .+||+|+|+|+ .. ..+..+.... ...++.. .|+|+++|++|||||
T Consensus 1 KI~iIGa-GS~~~~~~l~~~l~~~~~l~~~ei~L~Did~~RL~~~~~~~~~~~~~~-~~~~~v~-~ttd~~eAl~gADfV 77 (183)
T PF02056_consen 1 KITIIGA-GSTYFPLLLLGDLLRTEELSGSEIVLMDIDEERLEIVERLARRMVEEA-GADLKVE-ATTDRREALEGADFV 77 (183)
T ss_dssp EEEEETT-TSCCHHHHHHHHHHCTTTSTEEEEEEE-SCHHHHHHHHHHHHHHHHHC-TTSSEEE-EESSHHHHHTTESEE
T ss_pred CEEEECC-chHhhHHHHHHHHhcCccCCCcEEEEEcCCHHHHHHHHHHHHHHHHhc-CCCeEEE-EeCCHHHHhCCCCEE
Confidence 8999999 8775553 23444443 2 46999999998 11 2223333222 2334432 357999999999999
Q ss_pred EEcCCC------------CCCCCCC----------HHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHH
Q 018512 115 IIPAGV------------PRKPGMT----------RDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEV 172 (354)
Q Consensus 115 Ii~ag~------------~~~~g~~----------r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~ 172 (354)
|++... |.+.|.. ......|++|.+.++++.|+++||+||+||+|||+.++|. +
T Consensus 78 i~~irvGg~~~r~~De~Ip~k~Gi~~~~~eT~G~GG~~~alRtipv~~~ia~~i~~~~PdAw~iNytNP~~~vt~----a 153 (183)
T PF02056_consen 78 INQIRVGGLEAREIDEEIPLKYGIVGTIQETVGPGGFFRALRTIPVMLDIARDIEELCPDAWLINYTNPMGIVTE----A 153 (183)
T ss_dssp EE---TTHHHHHHHHHHTGGCCTTT-BTTSSSTHHHHHHHHHHHHHHHHHHHHHHHHTTTSEEEE-SSSHHHHHH----H
T ss_pred EEEeeecchHHHHHHHHHHHHhCCccccccccCccHHHHHHhhHHHHHHHHHHHHHhCCCcEEEeccChHHHHHH----H
Confidence 997543 4444422 3456789999999999999999999999999999999974 4
Q ss_pred HHHhCCCCCCCEEEeccchHHHHHHHHHHHhCC
Q 018512 173 FKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGL 205 (354)
Q Consensus 173 ~~~~~~~p~~kviG~t~ld~~r~~~~la~~l~v 205 (354)
+.+. +|..|++|+|+... .+...+|+.||+
T Consensus 154 ~~r~--~~~~k~vGlCh~~~-~~~~~la~~L~~ 183 (183)
T PF02056_consen 154 LSRY--TPKIKVVGLCHGPQ-GTRRQLAKLLGM 183 (183)
T ss_dssp HHHH--STTSEEEEE-SHHH-HHHHHHHHHHT-
T ss_pred HHHh--CCCCCEEEECCCHH-HHHHHHHHHhCc
Confidence 4554 45579999998654 578999999874
No 45
>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]
Probab=98.89 E-value=6.1e-08 Score=93.79 Aligned_cols=114 Identities=18% Similarity=0.286 Sum_probs=82.2
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCch--------------hHHHHHh-cCCCCCeEEEEeCCCcHHhh
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--------------GVTADIS-HMDTGAVVRGFLGQPQLENA 107 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~--------------g~~~dl~-~~~~~~~v~~~~~~~d~~~a 107 (354)
|||+|+|. |+||...+..|+..|+ +|+++|+++.+ |. .+|. +.....+++. |+|+++|
T Consensus 1 MkI~viGt-GYVGLv~g~~lA~~GH--eVv~vDid~~KV~~ln~g~~PI~EpgL-e~ll~~~~~~gRl~f---Ttd~~~a 73 (414)
T COG1004 1 MKITVIGT-GYVGLVTGACLAELGH--EVVCVDIDESKVELLNKGISPIYEPGL-EELLKENLASGRLRF---TTDYEEA 73 (414)
T ss_pred CceEEECC-chHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHhCCCCCCcCccH-HHHHHhccccCcEEE---EcCHHHH
Confidence 89999998 9999999999999998 99999998621 11 1121 1111233554 5789999
Q ss_pred hCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCC-eEEEE-ecCCCCCchHHH
Q 018512 108 LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPN-ATVNL-ISNPVNSTVPIA 169 (354)
Q Consensus 108 l~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~-a~viv-~tNPv~~~~~~~ 169 (354)
++++|++|++.|.|.++. - ..++..+...++.|.++.+. ++|++ .|-|++....+-
T Consensus 74 ~~~adv~fIavgTP~~~d-g-----~aDl~~V~ava~~i~~~~~~~~vvV~KSTVPvGt~~~v~ 131 (414)
T COG1004 74 VKDADVVFIAVGTPPDED-G-----SADLSYVEAVAKDIGEILDGKAVVVIKSTVPVGTTEEVR 131 (414)
T ss_pred HhcCCEEEEEcCCCCCCC-C-----CccHHHHHHHHHHHHhhcCCCeEEEEcCCCCCCchHHHH
Confidence 999999999999998762 1 22456777888888877765 43333 368998776543
No 46
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=98.73 E-value=2.9e-08 Score=87.77 Aligned_cols=118 Identities=25% Similarity=0.378 Sum_probs=75.7
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--c-h--hHHHH-Hh---c-CCC--------CCeEEEEeCCCcHH
Q 018512 44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--T-P--GVTAD-IS---H-MDT--------GAVVRGFLGQPQLE 105 (354)
Q Consensus 44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~-~--g~~~d-l~---~-~~~--------~~~v~~~~~~~d~~ 105 (354)
||+|+|| |.+|..+|..++..|+ +|+|+|.++ . . ....+ +. + ... ...++. ++|++
T Consensus 1 ~V~ViGa-G~mG~~iA~~~a~~G~--~V~l~d~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~i~~---~~dl~ 74 (180)
T PF02737_consen 1 KVAVIGA-GTMGRGIAALFARAGY--EVTLYDRSPEALERARKRIERLLDRLVRKGRLSQEEADAALARISF---TTDLE 74 (180)
T ss_dssp EEEEES--SHHHHHHHHHHHHTTS--EEEEE-SSHHHHHHHHHHHHHHHHHHHHTTTTTHHHHHHHHHTEEE---ESSGG
T ss_pred CEEEEcC-CHHHHHHHHHHHhCCC--cEEEEECChHHHHhhhhHHHHHHhhhhhhccchhhhhhhhhhhccc---ccCHH
Confidence 7999999 9999999999999998 999999987 1 1 11111 11 1 110 123443 35776
Q ss_pred hhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCE
Q 018512 106 NALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKL 184 (354)
Q Consensus 106 ~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kv 184 (354)
++. +||+||.+. .++.+..+++...+.+.+ |++ |++||...+... +. ..... .++|+
T Consensus 75 ~~~-~adlViEai--------------~E~l~~K~~~~~~l~~~~~~~~--ilasnTSsl~i~---~l-a~~~~-~p~R~ 132 (180)
T PF02737_consen 75 EAV-DADLVIEAI--------------PEDLELKQELFAELDEICPPDT--ILASNTSSLSIS---EL-AAALS-RPERF 132 (180)
T ss_dssp GGC-TESEEEE-S---------------SSHHHHHHHHHHHHCCS-TTS--EEEE--SSS-HH---HH-HTTSS-TGGGE
T ss_pred HHh-hhheehhhc--------------cccHHHHHHHHHHHHHHhCCCc--eEEecCCCCCHH---HH-HhccC-cCceE
Confidence 655 999999984 557889999999999998 687 557887765542 21 22223 34678
Q ss_pred EEecc
Q 018512 185 LGVTM 189 (354)
Q Consensus 185 iG~t~ 189 (354)
+|+-.
T Consensus 133 ig~Hf 137 (180)
T PF02737_consen 133 IGMHF 137 (180)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 87743
No 47
>COG1250 FadB 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism]
Probab=98.72 E-value=5.9e-08 Score=92.18 Aligned_cols=122 Identities=23% Similarity=0.307 Sum_probs=85.2
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC---chhH--HH----HHhcCC--C----CCeEEEEeCCCcHHh
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGV--TA----DISHMD--T----GAVVRGFLGQPQLEN 106 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~---~~g~--~~----dl~~~~--~----~~~v~~~~~~~d~~~ 106 (354)
.+||+|||| |.+|+.+|..++..|+ +|+|+|+++ .++. .. .+.... . ...+..+..++++ .
T Consensus 3 i~kv~ViGa-G~MG~gIA~~~A~~G~--~V~l~D~~~~~~~~~~~~i~~~l~k~~~~g~l~~~~~~~~l~~i~~~~~~-~ 78 (307)
T COG1250 3 IKKVAVIGA-GVMGAGIAAVFALAGY--DVVLKDISPEALERALAYIEKNLEKLVEKGKLTEEEADAALARITPTTDL-A 78 (307)
T ss_pred ccEEEEEcc-cchhHHHHHHHhhcCC--ceEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCChhhHHHHHhhccccCch-h
Confidence 469999999 9999999999999667 999999986 1111 11 111111 0 1112223334565 4
Q ss_pred hhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEE
Q 018512 107 ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLL 185 (354)
Q Consensus 107 al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kvi 185 (354)
++++||+||.++ .+|.++.+++..++.+++ |++ |+.||.+.+...-++ ..... |+|++
T Consensus 79 ~l~~~DlVIEAv--------------~E~levK~~vf~~l~~~~~~~a--IlASNTSsl~it~ia----~~~~r-per~i 137 (307)
T COG1250 79 ALKDADLVIEAV--------------VEDLELKKQVFAELEALAKPDA--ILASNTSSLSITELA----EALKR-PERFI 137 (307)
T ss_pred HhccCCEEEEec--------------cccHHHHHHHHHHHHhhcCCCc--EEeeccCCCCHHHHH----HHhCC-chhEE
Confidence 899999999983 778899999999999999 688 669999986654332 22233 46788
Q ss_pred Eec
Q 018512 186 GVT 188 (354)
Q Consensus 186 G~t 188 (354)
|+-
T Consensus 138 G~H 140 (307)
T COG1250 138 GLH 140 (307)
T ss_pred EEe
Confidence 873
No 48
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=98.66 E-value=1.8e-07 Score=88.39 Aligned_cols=111 Identities=19% Similarity=0.280 Sum_probs=78.6
Q ss_pred EEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEE-EeCCCcHHhhhCCCcEEEEcCCCCCCC
Q 018512 46 AILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENALTGMDLVIIPAGVPRKP 124 (354)
Q Consensus 46 ~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~~~d~~~al~~aDvVIi~ag~~~~~ 124 (354)
.|+||+||+|++++..|+..+...+|..+|+........++........+.. +....++.+|++|+|+||++|+...-.
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa~~~~~ 80 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQKSGVKEYIQGDITDPESLEEALEGVDVVFHTAAPVPPW 80 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhcccceeEEEeccccHHHHHHHhcCCceEEEeCcccccc
Confidence 4899999999999999999986569999998762211122222221101122 223356789999999999998764444
Q ss_pred C-CCHHHHHHHHHHHHHHHHHHHhhhCCCeEEE
Q 018512 125 G-MTRDDLFNINAGIVRTLCEGIAKCCPNATVN 156 (354)
Q Consensus 125 g-~~r~d~~~~n~~~~~~i~~~i~~~~p~a~vi 156 (354)
+ .....+..-|+...+++++.+++.+.+.+|.
T Consensus 81 ~~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVy 113 (280)
T PF01073_consen 81 GDYPPEEYYKVNVDGTRNVLEAARKAGVKRLVY 113 (280)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 4 4566788999999999999999887665443
No 49
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.58 E-value=4.8e-07 Score=86.97 Aligned_cols=118 Identities=16% Similarity=0.129 Sum_probs=81.5
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC-chhH-----HH---HHhcCCC-----CCeEEEEeCCCcHHhhh
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGV-----TA---DISHMDT-----GAVVRGFLGQPQLENAL 108 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~-~~g~-----~~---dl~~~~~-----~~~v~~~~~~~d~~~al 108 (354)
.||+|||+ |.+|+.+|..++..|+ +|+++|+++ .... .. .+..... ...++. ++++++++
T Consensus 8 ~~VaVIGa-G~MG~giA~~~a~aG~--~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~---~~~l~~av 81 (321)
T PRK07066 8 KTFAAIGS-GVIGSGWVARALAHGL--DVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRF---VATIEACV 81 (321)
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhcee---cCCHHHHh
Confidence 58999999 9999999999999998 999999986 1110 00 1111100 112332 45788899
Q ss_pred CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCC-CeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe
Q 018512 109 TGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV 187 (354)
Q Consensus 109 ~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p-~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~ 187 (354)
++||+||.+. .+|.++.+++...+.+++| ++ |+.||.+.+...-+ ...... ++|++|+
T Consensus 82 ~~aDlViEav--------------pE~l~vK~~lf~~l~~~~~~~a--IlaSnTS~l~~s~l----a~~~~~-p~R~~g~ 140 (321)
T PRK07066 82 ADADFIQESA--------------PEREALKLELHERISRAAKPDA--IIASSTSGLLPTDF----YARATH-PERCVVG 140 (321)
T ss_pred cCCCEEEECC--------------cCCHHHHHHHHHHHHHhCCCCe--EEEECCCccCHHHH----HHhcCC-cccEEEE
Confidence 9999999984 4567788889999999985 55 66888887654322 222233 3678776
No 50
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=98.57 E-value=6.6e-07 Score=89.78 Aligned_cols=174 Identities=13% Similarity=0.032 Sum_probs=101.4
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512 39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 118 (354)
Q Consensus 39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a 118 (354)
+.++|||.|+||+|++|++++..|+..|. +|+.+|+... +....+.+....+.+..+. .+-+..++.++|+||++|
T Consensus 117 ~~~~mkILVTGatGFIGs~Lv~~Ll~~G~--~V~~ldr~~~-~~~~~~~~~~~~~~~~~~~-~Di~~~~~~~~D~ViHlA 192 (436)
T PLN02166 117 GRKRLRIVVTGGAGFVGSHLVDKLIGRGD--EVIVIDNFFT-GRKENLVHLFGNPRFELIR-HDVVEPILLEVDQIYHLA 192 (436)
T ss_pred ccCCCEEEEECCccHHHHHHHHHHHHCCC--EEEEEeCCCC-ccHhHhhhhccCCceEEEE-CccccccccCCCEEEECc
Confidence 66779999999999999999999999887 9999997531 1101111111112233221 112234578999999998
Q ss_pred CCCC--CCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecC-CCCCch--HHHHHHHHHh-CCCCCCCEEEeccchH
Q 018512 119 GVPR--KPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN-PVNSTV--PIAAEVFKKA-GTYDPKKLLGVTMLDV 192 (354)
Q Consensus 119 g~~~--~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tN-Pv~~~~--~~~~~~~~~~-~~~p~~kviG~t~ld~ 192 (354)
+... ....+..+++..|+....++++.+++.+. .+|++|. -+.-.. ....|-.+.. .-+.+...+|.+.+..
T Consensus 193 a~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~--r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~p~s~Yg~SK~~a 270 (436)
T PLN02166 193 CPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--RFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTA 270 (436)
T ss_pred eeccchhhccCHHHHHHHHHHHHHHHHHHHHHhCC--EEEEECcHHHhCCCCCCCCCccccccCCCCCCCCchHHHHHHH
Confidence 7532 12234567788999999999999998763 4554432 111000 0000000000 0112234566666556
Q ss_pred HHHHHHHHHHhCCCCCCCc-ceEEeec
Q 018512 193 VRANTFVAEVLGLDPRDVD-VPVVGGH 218 (354)
Q Consensus 193 ~r~~~~la~~l~v~~~~v~-~~v~G~h 218 (354)
.++...+++..+++..-++ ..++|.+
T Consensus 271 E~~~~~y~~~~~l~~~ilR~~~vYGp~ 297 (436)
T PLN02166 271 ETLAMDYHRGAGVEVRIARIFNTYGPR 297 (436)
T ss_pred HHHHHHHHHHhCCCeEEEEEccccCCC
Confidence 6665556666676544443 3567754
No 51
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.56 E-value=1e-06 Score=88.78 Aligned_cols=166 Identities=19% Similarity=0.222 Sum_probs=111.7
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEeC----CCcHHhhhCC--CcE
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLG----QPQLENALTG--MDL 113 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~----~~d~~~al~~--aDv 113 (354)
.++|.|+||+|++|+.++..++..++ .+|+++|.++ ......++.+......++.+.+ ...++.++++ .|+
T Consensus 250 gK~vLVTGagGSiGsel~~qil~~~p-~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kvd~ 328 (588)
T COG1086 250 GKTVLVTGGGGSIGSELCRQILKFNP-KEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHKVDI 328 (588)
T ss_pred CCEEEEeCCCCcHHHHHHHHHHhcCC-CEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCCCce
Confidence 46899999999999999999988765 4999999998 3444455554311223333222 2335688899 999
Q ss_pred EEEcCCCCCCCCCC--HHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec----CCCCCchHHHHHHHHHhCCCCCCCEEEe
Q 018512 114 VIIPAGVPRKPGMT--RDDLFNINAGIVRTLCEGIAKCCPNATVNLIS----NPVNSTVPIAAEVFKKAGTYDPKKLLGV 187 (354)
Q Consensus 114 VIi~ag~~~~~g~~--r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t----NPv~~~~~~~~~~~~~~~~~p~~kviG~ 187 (354)
|+++|....-|-.+ -.+-+..|+-..+++++...+++-+.+|.+.| ||.+++ |.
T Consensus 329 VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDKAV~PtNvm--------------------Ga 388 (588)
T COG1086 329 VFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDKAVNPTNVM--------------------GA 388 (588)
T ss_pred EEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCcccCCchHh--------------------hH
Confidence 99999877666543 46778999999999999999999888888876 555554 33
Q ss_pred ccchHHHHHHHHHHHhCCCCCC---C-cceEEeecCCcccccccccc
Q 018512 188 TMLDVVRANTFVAEVLGLDPRD---V-DVPVVGGHAGVTILPLLSQV 230 (354)
Q Consensus 188 t~ld~~r~~~~la~~l~v~~~~---v-~~~v~G~hg~~~~vp~~s~~ 230 (354)
|..-...+-..+++..+-.... | .+-|+|..|+ .+|+|.+.
T Consensus 389 TKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGS--ViPlFk~Q 433 (588)
T COG1086 389 TKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRGS--VIPLFKKQ 433 (588)
T ss_pred HHHHHHHHHHHHhhccCCCCcEEEEEEecceecCCCC--CHHHHHHH
Confidence 3222222222222211111122 2 4578998885 89998864
No 52
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.52 E-value=9.4e-07 Score=83.82 Aligned_cols=119 Identities=19% Similarity=0.277 Sum_probs=80.9
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--c-hhH--HH----HHhcCCC---------CCeEEEEeCCCcH
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--T-PGV--TA----DISHMDT---------GAVVRGFLGQPQL 104 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~-~g~--~~----dl~~~~~---------~~~v~~~~~~~d~ 104 (354)
.||+|||+ |.+|..+|..++..|+ +|+|+|+++ . .+. .. .+.+... ...++ .++++
T Consensus 6 ~~V~ViGa-G~mG~~iA~~~a~~G~--~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~l~---~~~~~ 79 (286)
T PRK07819 6 QRVGVVGA-GQMGAGIAEVCARAGV--DVLVFETTEELATAGRNRIEKSLERAVSRGKLTERERDAALARLR---FTTDL 79 (286)
T ss_pred cEEEEEcc-cHHHHHHHHHHHhCCC--EEEEEECCHHHHHHHHHHHHHHHHHHHhcccCChhhHHHHHhCeE---eeCCH
Confidence 48999999 9999999999999998 999999987 1 111 11 1111110 01233 24576
Q ss_pred HhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC--CCeEEEEecCCCCCchHHHHHHHHHhCCCCCC
Q 018512 105 ENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC--PNATVNLISNPVNSTVPIAAEVFKKAGTYDPK 182 (354)
Q Consensus 105 ~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~--p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~ 182 (354)
+++++||+||.+. .++.++.+++...+.+.+ |++ |++||........+ ...... +.
T Consensus 80 -~~~~~~d~ViEav--------------~E~~~~K~~l~~~l~~~~~~~~~--il~snTS~~~~~~l----a~~~~~-~~ 137 (286)
T PRK07819 80 -GDFADRQLVIEAV--------------VEDEAVKTEIFAELDKVVTDPDA--VLASNTSSIPIMKL----AAATKR-PG 137 (286)
T ss_pred -HHhCCCCEEEEec--------------ccCHHHHHHHHHHHHHhhCCCCc--EEEECCCCCCHHHH----HhhcCC-Cc
Confidence 6799999999983 567788888999999997 466 44788777554322 233334 35
Q ss_pred CEEEecc
Q 018512 183 KLLGVTM 189 (354)
Q Consensus 183 kviG~t~ 189 (354)
|++|+-.
T Consensus 138 r~~g~hf 144 (286)
T PRK07819 138 RVLGLHF 144 (286)
T ss_pred cEEEEec
Confidence 7877743
No 53
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=98.52 E-value=2.4e-06 Score=82.95 Aligned_cols=174 Identities=15% Similarity=0.025 Sum_probs=103.1
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHh-cCC--CCCeEEEEeC----CCcHHhhhCCC
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADIS-HMD--TGAVVRGFLG----QPQLENALTGM 111 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~-~~~--~~~~v~~~~~----~~d~~~al~~a 111 (354)
+++||.|+||+|++|++++..|+..+. +|+.+|+... .....++. ... ....+..+.. ..++.+.++++
T Consensus 14 ~~~~vlVtGatGfiG~~lv~~L~~~g~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~ 91 (348)
T PRK15181 14 APKRWLITGVAGFIGSGLLEELLFLNQ--TVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKNV 91 (348)
T ss_pred cCCEEEEECCccHHHHHHHHHHHHCCC--EEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhCC
Confidence 457999999999999999999999887 8999998541 11111111 000 0112222211 12345668999
Q ss_pred cEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEecc
Q 018512 112 DLVIIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTM 189 (354)
Q Consensus 112 DvVIi~ag~~~~~--g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~t~ 189 (354)
|+||++|+....+ .....+....|+....++.+.+++.+.+-+|...|--+.-... ...........+...+|.+.
T Consensus 92 d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~~--~~~~~e~~~~~p~~~Y~~sK 169 (348)
T PRK15181 92 DYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHP--DLPKIEERIGRPLSPYAVTK 169 (348)
T ss_pred CEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCCC--CCCCCCCCCCCCCChhhHHH
Confidence 9999998864322 1234556789999999999999987655444333210100000 00000111122345677776
Q ss_pred chHHHHHHHHHHHhCCCCCCCc-ceEEeec
Q 018512 190 LDVVRANTFVAEVLGLDPRDVD-VPVVGGH 218 (354)
Q Consensus 190 ld~~r~~~~la~~l~v~~~~v~-~~v~G~h 218 (354)
+...++...+++..|++...++ +.++|.+
T Consensus 170 ~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~ 199 (348)
T PRK15181 170 YVNELYADVFARSYEFNAIGLRYFNVFGRR 199 (348)
T ss_pred HHHHHHHHHHHHHhCCCEEEEEecceeCcC
Confidence 6666666666777788766664 5788865
No 54
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=98.50 E-value=3.4e-07 Score=81.36 Aligned_cols=123 Identities=20% Similarity=0.282 Sum_probs=72.8
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcC----------------CCCCeEEEEeCCCcHHh
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHM----------------DTGAVVRGFLGQPQLEN 106 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~----------------~~~~~v~~~~~~~d~~~ 106 (354)
|||+|||. |+||..+|..|+..|+ +|+.+|+++. .+..++.. .....++. ++|.++
T Consensus 1 M~I~ViGl-GyvGl~~A~~lA~~G~--~V~g~D~~~~--~v~~l~~g~~p~~E~~l~~ll~~~~~~~~l~~---t~~~~~ 72 (185)
T PF03721_consen 1 MKIAVIGL-GYVGLPLAAALAEKGH--QVIGVDIDEE--KVEALNNGELPIYEPGLDELLKENVSAGRLRA---TTDIEE 72 (185)
T ss_dssp -EEEEE---STTHHHHHHHHHHTTS--EEEEE-S-HH--HHHHHHTTSSSS-CTTHHHHHHHHHHTTSEEE---ESEHHH
T ss_pred CEEEEECC-CcchHHHHHHHHhCCC--EEEEEeCChH--HHHHHhhccccccccchhhhhccccccccchh---hhhhhh
Confidence 89999999 9999999999999998 9999999861 11112211 01234554 357788
Q ss_pred hhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEe-cCCCCCchHHHHHHHHHhCCC
Q 018512 107 ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLI-SNPVNSTVPIAAEVFKKAGTY 179 (354)
Q Consensus 107 al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~-tNPv~~~~~~~~~~~~~~~~~ 179 (354)
++++||++|++.+.|...+.+ -+...+.+.++.|.++. ++.+|++= |-|++..-.++...+.+.++.
T Consensus 73 ai~~adv~~I~VpTP~~~~~~------~Dls~v~~a~~~i~~~l~~~~lvV~~STvppGtt~~~~~~ile~~~~~ 141 (185)
T PF03721_consen 73 AIKDADVVFICVPTPSDEDGS------PDLSYVESAIESIAPVLRPGDLVVIESTVPPGTTEELLKPILEKRSGK 141 (185)
T ss_dssp HHHH-SEEEE----EBETTTS------BETHHHHHHHHHHHHHHCSCEEEEESSSSSTTHHHHHHHHHHHHHCCT
T ss_pred hhhccceEEEecCCCccccCC------ccHHHHHHHHHHHHHHHhhcceEEEccEEEEeeehHhhhhhhhhhccc
Confidence 899999999999888655321 12234455555555544 34544443 688888765555556666553
No 55
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=98.50 E-value=6.2e-08 Score=91.31 Aligned_cols=120 Identities=20% Similarity=0.202 Sum_probs=75.9
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEE----EEeC----CCcHHhhhC--CCc
Q 018512 45 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVR----GFLG----QPQLENALT--GMD 112 (354)
Q Consensus 45 I~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~----~~~~----~~d~~~al~--~aD 112 (354)
|.|+||+|++|+.++..|+..++ .+|+++|+++ ......++........++ .+.+ ...+..+++ +.|
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p-~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pd 79 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGP-KKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPD 79 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB--SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-S
T ss_pred CEEEccccHHHHHHHHHHHhcCC-CeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCC
Confidence 68999999999999999998876 4899999987 344445553111111121 1111 122456778 999
Q ss_pred EEEEcCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec----CCCCCc
Q 018512 113 LVIIPAGVPRKPG--MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS----NPVNST 165 (354)
Q Consensus 113 vVIi~ag~~~~~g--~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t----NPv~~~ 165 (354)
+|+++|+...-+- ....+.+..|+-..+++++...+++.+.+|.+.| ||++++
T Consensus 80 iVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKAv~Ptnvm 138 (293)
T PF02719_consen 80 IVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKAVNPTNVM 138 (293)
T ss_dssp EEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGCSS--SHH
T ss_pred EEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccccCCCCcHH
Confidence 9999998654321 2356778999999999999999999888888876 566555
No 56
>TIGR02441 fa_ox_alpha_mit fatty acid oxidation complex, alpha subunit, mitochondrial. Members represent alpha subunit of mitochondrial multifunctional fatty acid degradation enzyme complex. Subunit activities include: enoyl-CoA hydratase (EC 4.2.1.17) & 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35). Some characterization in human, pig, and rat. The beta subunit has activity: acetyl-CoA C-acyltransferase (EC 2.3.1.16).
Probab=98.46 E-value=6.3e-07 Score=95.29 Aligned_cols=119 Identities=18% Similarity=0.227 Sum_probs=84.2
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC---chhH--HHH-H----hcCC-C-------CCeEEEEeCCC
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGV--TAD-I----SHMD-T-------GAVVRGFLGQP 102 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~---~~g~--~~d-l----~~~~-~-------~~~v~~~~~~~ 102 (354)
+..||+|||| |.+|..+|..++..|+ +|+|+|+++ .++. ..+ + .... . ...++. ++
T Consensus 334 ~i~~v~ViGa-G~MG~gIA~~~a~~G~--~V~l~d~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~---~~ 407 (737)
T TIGR02441 334 PVKTLAVLGA-GLMGAGIAQVSVDKGL--KTVLKDATPAGLDRGQQQVFKGLNKKVKRKKITSLERDSILSNLTP---TL 407 (737)
T ss_pred cccEEEEECC-CHhHHHHHHHHHhCCC--cEEEecCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEE---eC
Confidence 4468999999 9999999999999998 999999987 1211 111 1 1110 0 122333 45
Q ss_pred cHHhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHhCCCCC
Q 018512 103 QLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDP 181 (354)
Q Consensus 103 d~~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~ 181 (354)
|+ +++++||+||.+. .+|.++.+++..++.+++ |++ |++||.+.+-..-++ ..... |
T Consensus 408 ~~-~~~~~aDlViEAv--------------~E~l~~K~~vf~~l~~~~~~~~--ilasNTSsl~i~~la----~~~~~-p 465 (737)
T TIGR02441 408 DY-SGFKNADMVIEAV--------------FEDLSLKHKVIKEVEAVVPPHC--IIASNTSALPIKDIA----AVSSR-P 465 (737)
T ss_pred CH-HHhccCCeehhhc--------------cccHHHHHHHHHHHHhhCCCCc--EEEEcCCCCCHHHHH----hhcCC-c
Confidence 76 6799999999983 678899999999999999 576 558999886653322 22333 4
Q ss_pred CCEEEe
Q 018512 182 KKLLGV 187 (354)
Q Consensus 182 ~kviG~ 187 (354)
+|++|+
T Consensus 466 ~r~ig~ 471 (737)
T TIGR02441 466 EKVIGM 471 (737)
T ss_pred cceEEE
Confidence 688887
No 57
>TIGR02437 FadB fatty oxidation complex, alpha subunit FadB. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Activities include: enoyl-CoA hydratase (EC 4.2.1.17), dodecenoyl-CoA delta-isomerase activity (EC 5.3.3.8), 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadB. This model excludes the FadJ family represented by SP:P77399.
Probab=98.44 E-value=8e-07 Score=94.26 Aligned_cols=121 Identities=18% Similarity=0.205 Sum_probs=85.2
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC---chhH--HHH----H-hcCC-C-------CCeEEEEeCC
Q 018512 40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGV--TAD----I-SHMD-T-------GAVVRGFLGQ 101 (354)
Q Consensus 40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~---~~g~--~~d----l-~~~~-~-------~~~v~~~~~~ 101 (354)
.+..||+|||| |.+|..+|..++..|+ +|+|+|.++ .++. +.+ + .+.. . ...++ .+
T Consensus 311 ~~i~~v~ViGa-G~mG~gIA~~~a~~G~--~V~l~d~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~---~~ 384 (714)
T TIGR02437 311 KDVKQAAVLGA-GIMGGGIAYQSASKGT--PIVMKDINQHSLDLGLTEAAKLLNKQVERGRITPAKMAGVLNGIT---PT 384 (714)
T ss_pred cccceEEEECC-chHHHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhHHHHHhCeE---Ee
Confidence 34569999999 9999999999999998 999999986 1111 111 1 1110 0 11233 34
Q ss_pred CcHHhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHhCCCC
Q 018512 102 PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYD 180 (354)
Q Consensus 102 ~d~~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~~~~p 180 (354)
+++ +++++||+||.+. .+++++.+++..++.+.+ |++ |++||.+.+...-+ ......
T Consensus 385 ~~~-~~~~~aDlViEav--------------~E~l~~K~~vf~~l~~~~~~~~--ilasnTS~l~i~~i----a~~~~~- 442 (714)
T TIGR02437 385 LSY-AGFDNVDIVVEAV--------------VENPKVKAAVLAEVEQHVREDA--ILASNTSTISISLL----AKALKR- 442 (714)
T ss_pred CCH-HHhcCCCEEEEcC--------------cccHHHHHHHHHHHHhhCCCCc--EEEECCCCCCHHHH----HhhcCC-
Confidence 576 6799999999984 567889999999999999 576 56899988665322 222333
Q ss_pred CCCEEEec
Q 018512 181 PKKLLGVT 188 (354)
Q Consensus 181 ~~kviG~t 188 (354)
|+|++|+-
T Consensus 443 p~r~ig~H 450 (714)
T TIGR02437 443 PENFCGMH 450 (714)
T ss_pred cccEEEEe
Confidence 56888884
No 58
>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=98.44 E-value=1.3e-06 Score=92.68 Aligned_cols=119 Identities=18% Similarity=0.218 Sum_probs=83.9
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--c-hhH--HH----HHh-cCCC--------CCeEEEEeCCCc
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--T-PGV--TA----DIS-HMDT--------GAVVRGFLGQPQ 103 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~-~g~--~~----dl~-~~~~--------~~~v~~~~~~~d 103 (354)
..||+|||| |.+|..+|..++..|+ +|+|+|+++ + .+. .. .+. +... ...++. ++|
T Consensus 313 i~~v~ViGa-G~mG~gIA~~~a~~G~--~V~l~d~~~~~l~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~i~~---~~~ 386 (715)
T PRK11730 313 VKQAAVLGA-GIMGGGIAYQSASKGV--PVIMKDINQKALDLGMTEAAKLLNKQVERGKIDGAKMAGVLSSIRP---TLD 386 (715)
T ss_pred cceEEEECC-chhHHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhHHHHHhCeEE---eCC
Confidence 358999999 9999999999999998 999999986 1 111 11 111 1100 122333 457
Q ss_pred HHhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCC-CeEEEEecCCCCCchHHHHHHHHHhCCCCCC
Q 018512 104 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNSTVPIAAEVFKKAGTYDPK 182 (354)
Q Consensus 104 ~~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p-~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~ 182 (354)
+ +++++||+||.+. .+++++.+++..++.+++| ++ |++||.+.+-..-++ ..... +.
T Consensus 387 ~-~~~~~aDlViEav--------------~E~l~~K~~vf~~l~~~~~~~~--ilasNTSsl~i~~la----~~~~~-p~ 444 (715)
T PRK11730 387 Y-AGFERVDVVVEAV--------------VENPKVKAAVLAEVEQKVREDT--ILASNTSTISISLLA----KALKR-PE 444 (715)
T ss_pred H-HHhcCCCEEEecc--------------cCcHHHHHHHHHHHHhhCCCCc--EEEEcCCCCCHHHHH----hhcCC-Cc
Confidence 6 6799999999983 6678899999999999995 66 558999886543222 23333 46
Q ss_pred CEEEec
Q 018512 183 KLLGVT 188 (354)
Q Consensus 183 kviG~t 188 (354)
|++|+-
T Consensus 445 r~~g~H 450 (715)
T PRK11730 445 NFCGMH 450 (715)
T ss_pred cEEEEe
Confidence 888873
No 59
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=98.43 E-value=4e-06 Score=76.32 Aligned_cols=102 Identities=19% Similarity=0.124 Sum_probs=62.8
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCC-C-CCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMD-T-GAVVRGFLGQPQLENALTGMDLVIIPA 118 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~-~-~~~v~~~~~~~d~~~al~~aDvVIi~a 118 (354)
|||+|||++|++|++++..|...++ +|.++|+++ ......+..+.. . ....+... .+..++++++|+||++.
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~G~--~V~v~~r~~~~~~~l~~~~~~~~~~~g~~~~~~~--~~~~ea~~~aDvVilav 76 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKAGN--KIIIGSRDLEKAEEAAAKALEELGHGGSDIKVTG--ADNAEAAKRADVVILAV 76 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCC--EEEEEEcCHHHHHHHHHHHHhhccccCCCceEEE--eChHHHHhcCCEEEEEC
Confidence 7999998449999999999999886 899999876 222222222111 0 01111111 23367899999999985
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCC
Q 018512 119 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNS 164 (354)
Q Consensus 119 g~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~ 164 (354)
.. ..+.++++.+...-.+.+||-++||...
T Consensus 77 p~----------------~~~~~~l~~l~~~l~~~vvI~~~ngi~~ 106 (219)
T TIGR01915 77 PW----------------DHVLKTLESLRDELSGKLVISPVVPLAS 106 (219)
T ss_pred CH----------------HHHHHHHHHHHHhccCCEEEEeccCcee
Confidence 21 1223333344433334577778899875
No 60
>KOG2304 consensus 3-hydroxyacyl-CoA dehydrogenase [Lipid transport and metabolism]
Probab=98.40 E-value=2.9e-07 Score=82.56 Aligned_cols=124 Identities=23% Similarity=0.336 Sum_probs=86.9
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC---c---hhHHHHHhcCC-----CCC---------eEEEEe
Q 018512 40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---T---PGVTADISHMD-----TGA---------VVRGFL 99 (354)
Q Consensus 40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~---~---~g~~~dl~~~~-----~~~---------~v~~~~ 99 (354)
.+...|+|+|| |.+|+.+|+..+..|+ .|.|+|.++ . ++....+.+.. ..+ .+..+.
T Consensus 9 ~~~~~V~ivGa-G~MGSGIAQv~a~sg~--~V~l~d~~~~aL~~A~~~I~~sl~rvakKk~~~~~~~~~e~v~~~l~ri~ 85 (298)
T KOG2304|consen 9 AEIKNVAIVGA-GQMGSGIAQVAATSGL--NVWLVDANEDALSRATKAISSSLKRVAKKKKADDPVALEEFVDDTLDRIK 85 (298)
T ss_pred ccccceEEEcc-cccchhHHHHHHhcCC--ceEEecCCHHHHHHHHHHHHHHHHHHHhhcccCChhhHHHHHHHHHHHHH
Confidence 34458999999 9999999999999999 999999987 1 22222222211 000 011112
Q ss_pred CCCcHHhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCC-CeEEEEecCCCCCch-HHHHHHHHHhC
Q 018512 100 GQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNSTV-PIAAEVFKKAG 177 (354)
Q Consensus 100 ~~~d~~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p-~a~viv~tNPv~~~~-~~~~~~~~~~~ 177 (354)
.+++.+.++.+||+||.+ +.+|+.+.+++.+.+.+.|+ ++ |..||...+.- .++ ...
T Consensus 86 ~~tnv~~~v~dadliiEA--------------ivEn~diK~~lF~~l~~~ak~~~--il~tNTSSl~lt~ia-----~~~ 144 (298)
T KOG2304|consen 86 TSTNVSDAVSDADLIIEA--------------IVENLDIKRKLFKDLDKIAKSST--ILATNTSSLSLTDIA-----SAT 144 (298)
T ss_pred HcCCHHHhhhhhHHHHHH--------------HHHhHHHHHHHHHHHHhhcccce--EEeecccceeHHHHH-----hhc
Confidence 246788899999998887 58999999999999999996 55 55799887543 222 221
Q ss_pred CCCCCCEEEec
Q 018512 178 TYDPKKLLGVT 188 (354)
Q Consensus 178 ~~p~~kviG~t 188 (354)
-.+.|+.|+-
T Consensus 145 -~~~srf~GlH 154 (298)
T KOG2304|consen 145 -QRPSRFAGLH 154 (298)
T ss_pred -cChhhhceee
Confidence 2456888985
No 61
>PLN02427 UDP-apiose/xylose synthase
Probab=98.40 E-value=3.6e-06 Score=82.90 Aligned_cols=115 Identities=17% Similarity=0.094 Sum_probs=74.7
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHHhCC-CCcEEEEEecCCchhHHHHHhcCC---CCCeEEEE----eCCCcHHhhhCC
Q 018512 39 GAAGFKVAILGAAGGIGQPLAMLMKINP-LVSVLHLYDVVNTPGVTADISHMD---TGAVVRGF----LGQPQLENALTG 110 (354)
Q Consensus 39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~-~~~ei~L~D~~~~~g~~~dl~~~~---~~~~v~~~----~~~~d~~~al~~ 110 (354)
+.++|||.|+||+|++|++++..|+.++ . +|+.+|++... ...+.... ....++.+ ....++.+++++
T Consensus 11 ~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~--~V~~l~r~~~~--~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~ 86 (386)
T PLN02427 11 PIKPLTICMIGAGGFIGSHLCEKLMTETPH--KVLALDVYNDK--IKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKM 86 (386)
T ss_pred cccCcEEEEECCcchHHHHHHHHHHhcCCC--EEEEEecCchh--hhhhhccccccCCCCeEEEEcCCCChHHHHHHhhc
Confidence 5677899999999999999999999874 6 89999975421 11111110 01122222 112345678889
Q ss_pred CcEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512 111 MDLVIIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 159 (354)
Q Consensus 111 aDvVIi~ag~~~~~--g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t 159 (354)
+|+||++|+..... .....+.+..|+....++++.+++.+ . .+|.+|
T Consensus 87 ~d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~-~-r~v~~S 135 (386)
T PLN02427 87 ADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-K-RLIHFS 135 (386)
T ss_pred CCEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC-C-EEEEEe
Confidence 99999999854321 12234556788888889999888765 3 445444
No 62
>PRK11154 fadJ multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=98.39 E-value=9.2e-07 Score=93.84 Aligned_cols=120 Identities=19% Similarity=0.321 Sum_probs=84.1
Q ss_pred CCCeEEEEcCCCchHHHHHHHHH-hCCCCcEEEEEecCC---chh--HHHHH-----hcCC-C-------CCeEEEEeCC
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMK-INPLVSVLHLYDVVN---TPG--VTADI-----SHMD-T-------GAVVRGFLGQ 101 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~-~~~~~~ei~L~D~~~---~~g--~~~dl-----~~~~-~-------~~~v~~~~~~ 101 (354)
+-.||+|||| |.+|..+|..++ ..|+ +|+|+|.++ ..+ .+.+. .+.. . ...++. +
T Consensus 308 ~i~~v~ViGa-G~mG~giA~~~a~~~G~--~V~l~d~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~---~ 381 (708)
T PRK11154 308 PVNKVGVLGG-GLMGGGIAYVTATKAGL--PVRIKDINPQGINHALKYSWDLLDKKVKRRHLKPSERDKQMALISG---T 381 (708)
T ss_pred cccEEEEECC-chhhHHHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhcEEE---e
Confidence 3468999999 999999999998 7788 999999986 111 11111 1110 0 123443 4
Q ss_pred CcHHhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHhCCCC
Q 018512 102 PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYD 180 (354)
Q Consensus 102 ~d~~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~~~~p 180 (354)
+++ +++++||+||.+. .+|.++.+++...+.+++ |++ |++||...+...-++ .....
T Consensus 382 ~~~-~~~~~aDlViEav--------------~E~~~~K~~v~~~le~~~~~~~--ilasnTS~l~i~~la----~~~~~- 439 (708)
T PRK11154 382 TDY-RGFKHADVVIEAV--------------FEDLALKQQMVAEVEQNCAPHT--IFASNTSSLPIGQIA----AAAAR- 439 (708)
T ss_pred CCh-HHhccCCEEeecc--------------cccHHHHHHHHHHHHhhCCCCc--EEEECCCCCCHHHHH----HhcCc-
Confidence 576 6899999999983 678899999999999998 677 558999886653322 22233
Q ss_pred CCCEEEec
Q 018512 181 PKKLLGVT 188 (354)
Q Consensus 181 ~~kviG~t 188 (354)
+.|++|+-
T Consensus 440 p~r~ig~H 447 (708)
T PRK11154 440 PEQVIGLH 447 (708)
T ss_pred ccceEEEe
Confidence 46888873
No 63
>TIGR02440 FadJ fatty oxidation complex, alpha subunit FadJ. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Plays a minor role in aerobic beta-oxidation of fatty acids. FadJI complex is necessary for anaerobic growth on short-chain acids with nitrate as an electron acceptor. Activities include: enoyl-CoA hydratase (EC 4.2.1.17),3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadJ (aka YfcX). This model excludes the FadB of TIGR02437 equivalog.
Probab=98.39 E-value=2.7e-06 Score=90.15 Aligned_cols=120 Identities=19% Similarity=0.298 Sum_probs=82.9
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHh-CCCCcEEEEEecCC--c-hhH--HH-HHhc----CC-C-------CCeEEEEeCC
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKI-NPLVSVLHLYDVVN--T-PGV--TA-DISH----MD-T-------GAVVRGFLGQ 101 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~-~~~~~ei~L~D~~~--~-~g~--~~-dl~~----~~-~-------~~~v~~~~~~ 101 (354)
+..||+|||| |.+|+.+|..++. .|+ +|+|+|.++ . .+. .. .+.. .. . ...++. +
T Consensus 303 ~i~~v~ViGa-G~mG~~iA~~~a~~~G~--~V~l~d~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~---~ 376 (699)
T TIGR02440 303 KIKKVGILGG-GLMGGGIASVTATKAGI--PVRIKDINPQGINNALKYAWKLLDKGVKRRHMTPAERDNQMALITG---T 376 (699)
T ss_pred cccEEEEECC-cHHHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHcCeEE---e
Confidence 4468999999 9999999999884 788 999999986 1 111 11 1111 10 0 122333 4
Q ss_pred CcHHhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCC-CeEEEEecCCCCCchHHHHHHHHHhCCCC
Q 018512 102 PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNSTVPIAAEVFKKAGTYD 180 (354)
Q Consensus 102 ~d~~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p-~a~viv~tNPv~~~~~~~~~~~~~~~~~p 180 (354)
+|+ +++++||+||.++ .+++++.+++..++.++++ ++ |++||.+.+...-++ .....
T Consensus 377 ~~~-~~~~~adlViEav--------------~E~l~~K~~v~~~l~~~~~~~~--ilasnTS~l~i~~la----~~~~~- 434 (699)
T TIGR02440 377 TDY-RGFKDVDIVIEAV--------------FEDLALKHQMVKDIEQECAAHT--IFASNTSSLPIGQIA----AAASR- 434 (699)
T ss_pred CCh-HHhccCCEEEEec--------------cccHHHHHHHHHHHHhhCCCCc--EEEeCCCCCCHHHHH----HhcCC-
Confidence 576 6899999999983 5678899999999999994 66 558999886653332 22233
Q ss_pred CCCEEEec
Q 018512 181 PKKLLGVT 188 (354)
Q Consensus 181 ~~kviG~t 188 (354)
++|++|+-
T Consensus 435 p~r~~g~H 442 (699)
T TIGR02440 435 PENVIGLH 442 (699)
T ss_pred cccEEEEe
Confidence 46888873
No 64
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.39 E-value=3.1e-06 Score=80.25 Aligned_cols=119 Identities=21% Similarity=0.331 Sum_probs=76.1
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc---hhH--HHHHh-----cCCC---------CCeEEEEeCCCc
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGV--TADIS-----HMDT---------GAVVRGFLGQPQ 103 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~---~g~--~~dl~-----~~~~---------~~~v~~~~~~~d 103 (354)
+||+|||+ |.+|..+|..++..|+ +|+++|+++. +.. ...+. .... ...++. ++|
T Consensus 4 ~kIaViGa-G~mG~~iA~~la~~G~--~V~l~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~---~~d 77 (287)
T PRK08293 4 KNVTVAGA-GVLGSQIAFQTAFHGF--DVTIYDISDEALEKAKERIAKLADRYVRDLEATKEAPAEAALNRITL---TTD 77 (287)
T ss_pred cEEEEECC-CHHHHHHHHHHHhcCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhHHHHHcCeEE---eCC
Confidence 58999999 9999999999998888 9999999861 111 00110 0000 012332 457
Q ss_pred HHhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCC-CeEEEEecCCCCCchHHHHHHHHHhCCCCCC
Q 018512 104 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNSTVPIAAEVFKKAGTYDPK 182 (354)
Q Consensus 104 ~~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p-~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~ 182 (354)
+++++++||+||++. ..+.+..+++.+.+.++++ ++ ++++|....... +. ...... +.
T Consensus 78 ~~~a~~~aDlVieav--------------pe~~~~k~~~~~~l~~~~~~~~--ii~sntSt~~~~---~~-~~~~~~-~~ 136 (287)
T PRK08293 78 LAEAVKDADLVIEAV--------------PEDPEIKGDFYEELAKVAPEKT--IFATNSSTLLPS---QF-AEATGR-PE 136 (287)
T ss_pred HHHHhcCCCEEEEec--------------cCCHHHHHHHHHHHHhhCCCCC--EEEECcccCCHH---HH-HhhcCC-cc
Confidence 778899999999984 2345677777888888775 55 335676654432 21 222232 35
Q ss_pred CEEEec
Q 018512 183 KLLGVT 188 (354)
Q Consensus 183 kviG~t 188 (354)
|++|+.
T Consensus 137 r~vg~H 142 (287)
T PRK08293 137 KFLALH 142 (287)
T ss_pred cEEEEc
Confidence 777763
No 65
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=98.33 E-value=9.9e-06 Score=77.35 Aligned_cols=106 Identities=18% Similarity=0.133 Sum_probs=76.1
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chh--HHHHHhcCCCCCeEEEE----eCCCcHHhhhCCCc
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPG--VTADISHMDTGAVVRGF----LGQPQLENALTGMD 112 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g--~~~dl~~~~~~~~v~~~----~~~~d~~~al~~aD 112 (354)
..++|+|+||+|++|+.++..|+++|+ +|+--=+++ .+. +..+|.... .++..+ ...+.+.+|++|||
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY--~V~gtVR~~~~~k~~~~L~~l~~a~--~~l~l~~aDL~d~~sf~~ai~gcd 80 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGY--TVRGTVRDPEDEKKTEHLRKLEGAK--ERLKLFKADLLDEGSFDKAIDGCD 80 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCC--EEEEEEcCcchhhhHHHHHhcccCc--ccceEEeccccccchHHHHHhCCC
Confidence 457999999999999999999999999 666655554 222 344555332 112221 22345789999999
Q ss_pred EEEEcCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHhhhC
Q 018512 113 LVIIPAGVPRKPGM-TRDDLFNINAGIVRTLCEGIAKCC 150 (354)
Q Consensus 113 vVIi~ag~~~~~g~-~r~d~~~~n~~~~~~i~~~i~~~~ 150 (354)
.|+++|....-... .-.+++.-.++...++.+.+.+..
T Consensus 81 gVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~ 119 (327)
T KOG1502|consen 81 GVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTK 119 (327)
T ss_pred EEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccC
Confidence 99999875432222 234678889999999999999987
No 66
>PLN00198 anthocyanidin reductase; Provisional
Probab=98.32 E-value=1.5e-05 Score=76.81 Aligned_cols=177 Identities=15% Similarity=0.073 Sum_probs=101.7
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC-chhHHHHHhcCCCCCeEEEE----eCCCcHHhhhCCCcE
Q 018512 39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGF----LGQPQLENALTGMDL 113 (354)
Q Consensus 39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~-~~g~~~dl~~~~~~~~v~~~----~~~~d~~~al~~aDv 113 (354)
+..+++|.|+||+|++|++++..|+..|. +|++++++. ......++......+.+..+ ....++.++++++|+
T Consensus 6 ~~~~~~vlItG~~GfIG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~ 83 (338)
T PLN00198 6 PTGKKTACVIGGTGFLASLLIKLLLQKGY--AVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDL 83 (338)
T ss_pred CCCCCeEEEECCchHHHHHHHHHHHHCCC--EEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCE
Confidence 34567999999999999999999999887 887776654 22211112111111122222 112235677889999
Q ss_pred EEEcCCCCCCCCCC-HHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCc------hHHHHHH------HHHhCCC
Q 018512 114 VIIPAGVPRKPGMT-RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNST------VPIAAEV------FKKAGTY 179 (354)
Q Consensus 114 VIi~ag~~~~~g~~-r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~------~~~~~~~------~~~~~~~ 179 (354)
||++|+........ ..+++..|+....++++.+.+.. .+.+|.+.|--+... .....|- .... ..
T Consensus 84 vih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~-~~ 162 (338)
T PLN00198 84 VFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTS-EK 162 (338)
T ss_pred EEEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhh-cC
Confidence 99999753222122 23456889999999999998764 344444333211100 0000000 0000 12
Q ss_pred CCCCEEEeccchHHHHHHHHHHHhCCCCCCCc-ceEEeec
Q 018512 180 DPKKLLGVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGH 218 (354)
Q Consensus 180 p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~-~~v~G~h 218 (354)
++...+|.+.+...++...+++..|++...++ ..++|..
T Consensus 163 ~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~ 202 (338)
T PLN00198 163 PPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPS 202 (338)
T ss_pred CccchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCC
Confidence 33445666665566666677777787665554 5677865
No 67
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=98.30 E-value=2.5e-06 Score=73.63 Aligned_cols=94 Identities=23% Similarity=0.324 Sum_probs=62.8
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCC--C------CCeEEEEeCCCcHHhhhCCCcEEE
Q 018512 44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD--T------GAVVRGFLGQPQLENALTGMDLVI 115 (354)
Q Consensus 44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~--~------~~~v~~~~~~~d~~~al~~aDvVI 115 (354)
||+|+|| |+.|+++|..|..+++ +|.|+++++.......-.+.. . ...+.. ++|+++++++||+||
T Consensus 1 KI~ViGa-G~~G~AlA~~la~~g~--~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~---t~dl~~a~~~ad~Ii 74 (157)
T PF01210_consen 1 KIAVIGA-GNWGTALAALLADNGH--EVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKA---TTDLEEALEDADIII 74 (157)
T ss_dssp EEEEESS-SHHHHHHHHHHHHCTE--EEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEE---ESSHHHHHTT-SEEE
T ss_pred CEEEECc-CHHHHHHHHHHHHcCC--EEEEEeccHHHHHHHHHhCCCCCCCCCcccCccccc---ccCHHHHhCcccEEE
Confidence 8999999 9999999999999997 999999976211112122221 1 112333 468899999999999
Q ss_pred EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCC-CeEEEEec
Q 018512 116 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLIS 159 (354)
Q Consensus 116 i~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p-~a~viv~t 159 (354)
++. | ....+++++++..+-+ +..++.++
T Consensus 75 iav--P--------------s~~~~~~~~~l~~~l~~~~~ii~~~ 103 (157)
T PF01210_consen 75 IAV--P--------------SQAHREVLEQLAPYLKKGQIIISAT 103 (157)
T ss_dssp E-S-----------------GGGHHHHHHHHTTTSHTT-EEEETS
T ss_pred ecc--c--------------HHHHHHHHHHHhhccCCCCEEEEec
Confidence 973 2 1246678888888774 44555443
No 68
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=98.30 E-value=1.2e-05 Score=76.79 Aligned_cols=113 Identities=17% Similarity=0.118 Sum_probs=73.7
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCch-hHHHHHhcCC-CCCeEEEE----eCCCcHHhhhCCCcEEE
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHMD-TGAVVRGF----LGQPQLENALTGMDLVI 115 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~-g~~~dl~~~~-~~~~v~~~----~~~~d~~~al~~aDvVI 115 (354)
.+||.|+||+|++|++++..|+..|+ +|++++++... .....+.... ....+..+ .....+.++++++|+||
T Consensus 4 ~~~ilVtGatGfIG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 81 (322)
T PLN02662 4 GKVVCVTGASGYIASWLVKLLLQRGY--TVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVF 81 (322)
T ss_pred CCEEEEECChHHHHHHHHHHHHHCCC--EEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEE
Confidence 36999999999999999999999988 88888876521 1112221110 01122221 12234667889999999
Q ss_pred EcCCCCCCC-CCCHHHHHHHHHHHHHHHHHHHhhh-CCCeEEE
Q 018512 116 IPAGVPRKP-GMTRDDLFNINAGIVRTLCEGIAKC-CPNATVN 156 (354)
Q Consensus 116 i~ag~~~~~-g~~r~d~~~~n~~~~~~i~~~i~~~-~p~a~vi 156 (354)
++|+..... .....+++..|+....++++.+.+. ..+.+|.
T Consensus 82 h~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~ 124 (322)
T PLN02662 82 HTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVV 124 (322)
T ss_pred EeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEE
Confidence 998754321 1122356778999999999998876 4444333
No 69
>PLN02206 UDP-glucuronate decarboxylase
Probab=98.29 E-value=8.1e-06 Score=82.12 Aligned_cols=113 Identities=14% Similarity=0.049 Sum_probs=75.7
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEE
Q 018512 39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVII 116 (354)
Q Consensus 39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi 116 (354)
+.+.|||.|+||+|+||++++..|+.+|. +|+.+|... ....... +.. .+.++.+.. +-...++.++|+||+
T Consensus 116 ~~~~~kILVTGatGfIGs~Lv~~Ll~~G~--~V~~ld~~~~~~~~~~~~--~~~-~~~~~~i~~-D~~~~~l~~~D~ViH 189 (442)
T PLN02206 116 KRKGLRVVVTGGAGFVGSHLVDRLMARGD--SVIVVDNFFTGRKENVMH--HFS-NPNFELIRH-DVVEPILLEVDQIYH 189 (442)
T ss_pred ccCCCEEEEECcccHHHHHHHHHHHHCcC--EEEEEeCCCccchhhhhh--hcc-CCceEEEEC-CccChhhcCCCEEEE
Confidence 44568999999999999999999999987 899998753 1111111 111 122333211 122356789999999
Q ss_pred cCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512 117 PAGVPR--KPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 159 (354)
Q Consensus 117 ~ag~~~--~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t 159 (354)
+|+... .......+++..|+....++++.+++.+. .+|++|
T Consensus 190 lAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~--r~V~~S 232 (442)
T PLN02206 190 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTS 232 (442)
T ss_pred eeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhCC--EEEEEC
Confidence 987542 11223456788999999999999988753 455444
No 70
>PLN02650 dihydroflavonol-4-reductase
Probab=98.27 E-value=1.9e-05 Score=76.54 Aligned_cols=178 Identities=15% Similarity=0.040 Sum_probs=101.0
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc-hhHHHHHhcC-CCCCeEEEE----eCCCcHHhhhCCCcE
Q 018512 40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHM-DTGAVVRGF----LGQPQLENALTGMDL 113 (354)
Q Consensus 40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~-~g~~~dl~~~-~~~~~v~~~----~~~~d~~~al~~aDv 113 (354)
+..++|.|+||+|++|++++..|+..|. +|++++++.. .....++... .....+..+ .....+.++++++|+
T Consensus 3 ~~~k~iLVTGatGfIGs~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~ 80 (351)
T PLN02650 3 SQKETVCVTGASGFIGSWLVMRLLERGY--TVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTG 80 (351)
T ss_pred CCCCEEEEeCCcHHHHHHHHHHHHHCCC--EEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCE
Confidence 3456999999999999999999999887 8888887651 1111122111 111112221 112345678899999
Q ss_pred EEEcCCCCCCCCCC-HHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCC-CCCc----hHHHHHHHH---Hh--CCCCCC
Q 018512 114 VIIPAGVPRKPGMT-RDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP-VNST----VPIAAEVFK---KA--GTYDPK 182 (354)
Q Consensus 114 VIi~ag~~~~~g~~-r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNP-v~~~----~~~~~~~~~---~~--~~~p~~ 182 (354)
||++|+........ ..+.+..|+....++++.+.+.+.-..||++|.. +..- .+...+-.+ .. ...++.
T Consensus 81 ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~ 160 (351)
T PLN02650 81 VFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTG 160 (351)
T ss_pred EEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhhcccccc
Confidence 99998753211112 2356788999999999999886532344444322 1000 000000000 00 000011
Q ss_pred CEEEeccchHHHHHHHHHHHhCCCCCCCc-ceEEeecC
Q 018512 183 KLLGVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGHA 219 (354)
Q Consensus 183 kviG~t~ld~~r~~~~la~~l~v~~~~v~-~~v~G~hg 219 (354)
..+|.+.+....+...+++..|++..-++ +.++|...
T Consensus 161 ~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~ 198 (351)
T PLN02650 161 WMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFI 198 (351)
T ss_pred chHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCC
Confidence 24666665556666667777787765554 56888653
No 71
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=98.27 E-value=1.4e-05 Score=75.03 Aligned_cols=165 Identities=16% Similarity=0.122 Sum_probs=108.0
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEE-EeCCCcHHhhh--CCCcEEEEcCC
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENAL--TGMDLVIIPAG 119 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~~~d~~~al--~~aDvVIi~ag 119 (354)
|+|.|+||+|++||+.+..|++.|. +++.+|... .|...-+.... ...+.+ +.+..-+.+.| ...|.||+.|+
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~--~vvV~DNL~-~g~~~~v~~~~-~~f~~gDi~D~~~L~~vf~~~~idaViHFAa 76 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGH--EVVVLDNLS-NGHKIALLKLQ-FKFYEGDLLDRALLTAVFEENKIDAVVHFAA 76 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCC--eEEEEecCC-CCCHHHhhhcc-CceEEeccccHHHHHHHHHhcCCCEEEECcc
Confidence 6899999999999999999999998 999999865 11111111110 011111 11111122222 47899999987
Q ss_pred CCCCCC--CCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEe-----cCCCCCchHHHHHHHHHhCCCCCCCEEEeccchH
Q 018512 120 VPRKPG--MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI-----SNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDV 192 (354)
Q Consensus 120 ~~~~~g--~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~-----tNPv~~~~~~~~~~~~~~~~~p~~kviG~t~ld~ 192 (354)
...-.. +.-..+...|+-....+.+.|++++.+.+|+-. .+|..+- + .+..-..|.+.+|-+.|..
T Consensus 77 ~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~P--I-----~E~~~~~p~NPYG~sKlm~ 149 (329)
T COG1087 77 SISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTSP--I-----SETSPLAPINPYGRSKLMS 149 (329)
T ss_pred ccccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCcc--c-----CCCCCCCCCCcchhHHHHH
Confidence 643211 235678899999999999999999988766543 3454421 1 1222344678899998888
Q ss_pred HHHHHHHHHHhCCCCCCC-cceEEeec
Q 018512 193 VRANTFVAEVLGLDPRDV-DVPVVGGH 218 (354)
Q Consensus 193 ~r~~~~la~~l~v~~~~v-~~~v~G~h 218 (354)
.++-..+++..+....-+ +.-+.|-|
T Consensus 150 E~iL~d~~~a~~~~~v~LRYFN~aGA~ 176 (329)
T COG1087 150 EEILRDAAKANPFKVVILRYFNVAGAC 176 (329)
T ss_pred HHHHHHHHHhCCCcEEEEEecccccCC
Confidence 888888888887654443 34456644
No 72
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=98.27 E-value=2.2e-05 Score=76.21 Aligned_cols=174 Identities=14% Similarity=0.057 Sum_probs=96.3
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCch--hHHHHHhcCCCCCeEEE-EeCCCcHHhhhCC--CcEEEE
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRG-FLGQPQLENALTG--MDLVII 116 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~--g~~~dl~~~~~~~~v~~-~~~~~d~~~al~~--aDvVIi 116 (354)
.++|.|+||+|++|++++..|+..|. +|+.+|++... .....+........+.. .....++.+.+++ .|+||+
T Consensus 4 ~k~ilItGatG~IG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih 81 (349)
T TIGR02622 4 GKKVLVTGHTGFKGSWLSLWLLELGA--EVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFH 81 (349)
T ss_pred CCEEEEECCCChhHHHHHHHHHHCCC--EEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEE
Confidence 46899999999999999999999887 89999987621 11111211110001111 1111234455554 599999
Q ss_pred cCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCC-CCCchHHHHHHHHHhCCCCCCCEEEeccchHH
Q 018512 117 PAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP-VNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVV 193 (354)
Q Consensus 117 ~ag~~~~~--g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNP-v~~~~~~~~~~~~~~~~~p~~kviG~t~ld~~ 193 (354)
+|+.+... .......+..|+....++++.+++.+....++++|.. +...... ...+.....+++...+|.+.....
T Consensus 82 ~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~-~~~~~e~~~~~p~~~Y~~sK~~~e 160 (349)
T TIGR02622 82 LAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEW-VWGYRETDPLGGHDPYSSSKACAE 160 (349)
T ss_pred CCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCC-CCCCccCCCCCCCCcchhHHHHHH
Confidence 99854221 1223456788999999999999876533345555431 1110000 000011112334456777665555
Q ss_pred HHHHHHHHHh-------CCCCCCCc-ceEEeec
Q 018512 194 RANTFVAEVL-------GLDPRDVD-VPVVGGH 218 (354)
Q Consensus 194 r~~~~la~~l-------~v~~~~v~-~~v~G~h 218 (354)
++...+++.+ +++...++ +.++|..
T Consensus 161 ~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~ 193 (349)
T TIGR02622 161 LVIASYRSSFFGVANFHGIKIASARAGNVIGGG 193 (349)
T ss_pred HHHHHHHHHhhcccccCCCcEEEEccCcccCCC
Confidence 6656666654 44443443 4566653
No 73
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=98.24 E-value=1.4e-05 Score=84.27 Aligned_cols=171 Identities=13% Similarity=0.039 Sum_probs=101.6
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhC-CCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeC----CCc-HHhhhCCCcE
Q 018512 40 AAGFKVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG----QPQ-LENALTGMDL 113 (354)
Q Consensus 40 ~~~~kI~IiGa~G~vG~~~a~~l~~~-~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~----~~d-~~~al~~aDv 113 (354)
.+.|||+|+||+|++|++++..|+.. ++ +|+.+|+.... . .++.. ...++.+.+ ..+ +.++++++|+
T Consensus 313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~--~V~~l~r~~~~-~-~~~~~---~~~~~~~~gDl~d~~~~l~~~l~~~D~ 385 (660)
T PRK08125 313 KRRTRVLILGVNGFIGNHLTERLLRDDNY--EVYGLDIGSDA-I-SRFLG---HPRFHFVEGDISIHSEWIEYHIKKCDV 385 (660)
T ss_pred hcCCEEEEECCCchHHHHHHHHHHhCCCc--EEEEEeCCchh-h-hhhcC---CCceEEEeccccCcHHHHHHHhcCCCE
Confidence 35689999999999999999999875 57 99999986521 1 11111 111222111 111 3467899999
Q ss_pred EEEcCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCch--HHHHHHHHHhCCCC---CCCEEE
Q 018512 114 VIIPAGVPRK--PGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTV--PIAAEVFKKAGTYD---PKKLLG 186 (354)
Q Consensus 114 VIi~ag~~~~--~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~--~~~~~~~~~~~~~p---~~kviG 186 (354)
||++|+.... ......+++..|+....++.+.++++. ..+|+..|.-+.-.. ....|-.......| +...+|
T Consensus 386 ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~-~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~s~Yg 464 (660)
T PRK08125 386 VLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN-KRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQRWIYS 464 (660)
T ss_pred EEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC-CeEEEEcchhhcCCCCCCCcCccccccccCCCCCCccchH
Confidence 9999875432 222345677889999999999999876 334434443221100 00000000000001 223677
Q ss_pred eccchHHHHHHHHHHHhCCCCCCCc-ceEEeec
Q 018512 187 VTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGH 218 (354)
Q Consensus 187 ~t~ld~~r~~~~la~~l~v~~~~v~-~~v~G~h 218 (354)
.+.+...++-..+++..|++...++ ..++|..
T Consensus 465 ~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~ 497 (660)
T PRK08125 465 VSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPR 497 (660)
T ss_pred HHHHHHHHHHHHHHHhcCCceEEEEEceeeCCC
Confidence 7766666776777778788766665 4578864
No 74
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=98.24 E-value=1e-05 Score=79.46 Aligned_cols=175 Identities=14% Similarity=0.051 Sum_probs=100.1
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEE--EeCCCcHHhhhCCCcEEEE
Q 018512 39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG--FLGQPQLENALTGMDLVII 116 (354)
Q Consensus 39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~--~~~~~d~~~al~~aDvVIi 116 (354)
.+..|||+|+||+|++|++++..|...|+ +|+.+|+.... . +........+.. +....++..+++++|+||+
T Consensus 18 ~~~~~~IlVtGgtGfIG~~l~~~L~~~G~--~V~~v~r~~~~-~---~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih 91 (370)
T PLN02695 18 PSEKLRICITGAGGFIASHIARRLKAEGH--YIIASDWKKNE-H---MSEDMFCHEFHLVDLRVMENCLKVTKGVDHVFN 91 (370)
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHhCCC--EEEEEEecccc-c---cccccccceEEECCCCCHHHHHHHHhCCCEEEE
Confidence 34568999999999999999999999888 99999975311 0 000000011110 1111223456789999999
Q ss_pred cCCCCCCCC---CCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHH--HHHH-h-CCCCCCCEEEecc
Q 018512 117 PAGVPRKPG---MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAE--VFKK-A-GTYDPKKLLGVTM 189 (354)
Q Consensus 117 ~ag~~~~~g---~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~--~~~~-~-~~~p~~kviG~t~ 189 (354)
+|+.....+ .........|+....++++.+++...+.+|...|.-+.--...... -+.. . ..+.+...+|.+.
T Consensus 92 ~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p~s~Yg~sK 171 (370)
T PLN02695 92 LAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEK 171 (370)
T ss_pred cccccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCccccCcCCCcCcccCCCCCCCCHHHHHH
Confidence 987432111 1123345789999999999998877665554433211110000000 0000 0 0123444666665
Q ss_pred chHHHHHHHHHHHhCCCCCCCc-ceEEeecC
Q 018512 190 LDVVRANTFVAEVLGLDPRDVD-VPVVGGHA 219 (354)
Q Consensus 190 ld~~r~~~~la~~l~v~~~~v~-~~v~G~hg 219 (354)
....++...+++..|++..-++ ..++|.++
T Consensus 172 ~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~ 202 (370)
T PLN02695 172 LATEELCKHYTKDFGIECRIGRFHNIYGPFG 202 (370)
T ss_pred HHHHHHHHHHHHHhCCCEEEEEECCccCCCC
Confidence 5566665556777787655554 56778654
No 75
>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC. This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families.
Probab=98.22 E-value=5.7e-06 Score=84.42 Aligned_cols=122 Identities=22% Similarity=0.302 Sum_probs=78.7
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--c-hhH--H-H---HHhcCCC---------CCeEEEEeCCC
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--T-PGV--T-A---DISHMDT---------GAVVRGFLGQP 102 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~-~g~--~-~---dl~~~~~---------~~~v~~~~~~~ 102 (354)
+..||+|||+ |.+|+.+|..++..|+ +|+++|+++ . .+. . . .+..... ...++. ++
T Consensus 4 ~~~kV~VIGa-G~MG~gIA~~la~aG~--~V~l~d~~~e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~---~~ 77 (503)
T TIGR02279 4 NVVTVAVIGA-GAMGAGIAQVAASAGH--QVLLYDIRAEALARAIAGIEARLNSLVTKGKLTAEECERTLKRLIP---VT 77 (503)
T ss_pred CccEEEEECc-CHHHHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHhccEE---eC
Confidence 3458999999 9999999999999998 999999986 1 111 0 1 1111110 012332 35
Q ss_pred cHHhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCC
Q 018512 103 QLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPK 182 (354)
Q Consensus 103 d~~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~ 182 (354)
++ +++++||+||.+. .++..+.+.+...+.++++... |++||.+.+-..-+++. ... +.
T Consensus 78 ~~-~~l~~aDlVIEav--------------~E~~~vK~~vf~~l~~~~~~~~-IlasnTStl~i~~iA~~----~~~-p~ 136 (503)
T TIGR02279 78 DL-HALADAGLVIEAI--------------VENLEVKKALFAQLEELCPADT-IIASNTSSLSITAIAAG----LAR-PE 136 (503)
T ss_pred CH-HHhCCCCEEEEcC--------------cCcHHHHHHHHHHHHhhCCCCe-EEEECCCCCCHHHHHHh----cCc-cc
Confidence 66 5689999999983 4456677788888888885432 45788877665322222 222 34
Q ss_pred CEEEecc
Q 018512 183 KLLGVTM 189 (354)
Q Consensus 183 kviG~t~ 189 (354)
|++|+-+
T Consensus 137 r~~G~HF 143 (503)
T TIGR02279 137 RVAGLHF 143 (503)
T ss_pred ceEEEec
Confidence 6767643
No 76
>PLN02353 probable UDP-glucose 6-dehydrogenase
Probab=98.22 E-value=1e-05 Score=81.85 Aligned_cols=120 Identities=15% Similarity=0.177 Sum_probs=76.3
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCC---------------CCCeEEEEeCCCcHHh
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD---------------TGAVVRGFLGQPQLEN 106 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~---------------~~~~v~~~~~~~d~~~ 106 (354)
+|||+|||+ |+||..+|..|+..|...+|+.+|+++.+ +..+.... ....+.. ++++++
T Consensus 1 ~m~I~ViG~-GyvGl~~A~~lA~~g~g~~V~gvD~~~~~--v~~l~~g~~~~~e~gl~ell~~~~~~~l~~---t~~~~~ 74 (473)
T PLN02353 1 MVKICCIGA-GYVGGPTMAVIALKCPDIEVVVVDISVPR--IDAWNSDQLPIYEPGLDEVVKQCRGKNLFF---STDVEK 74 (473)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCCeEEEEECCHHH--HHHHHcCCCccCCCCHHHHHHHhhcCCEEE---EcCHHH
Confidence 489999999 99999999999998754489999998621 11111110 0111332 457778
Q ss_pred hhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEe--cCCCCCchHH
Q 018512 107 ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI--SNPVNSTVPI 168 (354)
Q Consensus 107 al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~--tNPv~~~~~~ 168 (354)
++++||++|++.+.|...+-...+ -.-++..+.+.++.|.++.+++.+++. |.|.+..-.+
T Consensus 75 ~i~~advi~I~V~TP~~~~g~~~~-~~~Dls~v~~a~~~i~~~l~~~~lVv~~STvp~Gtt~~~ 137 (473)
T PLN02353 75 HVAEADIVFVSVNTPTKTRGLGAG-KAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAI 137 (473)
T ss_pred HHhcCCEEEEEeCCCCCCCCCcCC-CCCcHHHHHHHHHHHHhhCCCCcEEEEeCCCCCChHHHH
Confidence 899999999999988643110000 012344566777777776654433332 6888776544
No 77
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=98.22 E-value=8.9e-06 Score=77.24 Aligned_cols=118 Identities=14% Similarity=0.217 Sum_probs=74.1
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc-hhHH-HH-------Hh---cCCC---------CCeEEEEeCC
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVT-AD-------IS---HMDT---------GAVVRGFLGQ 101 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~-~g~~-~d-------l~---~~~~---------~~~v~~~~~~ 101 (354)
.||+|||+ |.+|..++..++..|+ +|+++|+++. .... .. +. +... ...+.. +
T Consensus 4 ~~I~ViGa-G~mG~~iA~~la~~G~--~V~l~d~~~~~l~~~~~~i~~~~~~l~~~~~~g~~~~~~~~~~~~~i~~---~ 77 (291)
T PRK06035 4 KVIGVVGS-GVMGQGIAQVFARTGY--DVTIVDVSEEILKNAMELIESGPYGLRNLVEKGKMSEDEAKAIMARIRT---S 77 (291)
T ss_pred cEEEEECc-cHHHHHHHHHHHhcCC--eEEEEeCCHHHHHHHHHHHHhhhhhHHHHHHcCCCCHHHHHHHHhCcEe---e
Confidence 48999999 9999999999999998 9999999861 1111 00 11 1010 011222 3
Q ss_pred CcHHhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCC-CeEEEEecCCCCCchHHHHHHHHHhCCCC
Q 018512 102 PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNSTVPIAAEVFKKAGTYD 180 (354)
Q Consensus 102 ~d~~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p-~a~viv~tNPv~~~~~~~~~~~~~~~~~p 180 (354)
+++ +++++||+||.+. ..+.+..+++.+.+.++++ ++++ +||...+...-+ ..... .
T Consensus 78 ~~~-~~~~~aDlVieav--------------~e~~~~k~~~~~~l~~~~~~~~il--~S~tsg~~~~~l----a~~~~-~ 135 (291)
T PRK06035 78 TSY-ESLSDADFIVEAV--------------PEKLDLKRKVFAELERNVSPETII--ASNTSGIMIAEI----ATALE-R 135 (291)
T ss_pred CCH-HHhCCCCEEEEcC--------------cCcHHHHHHHHHHHHhhCCCCeEE--EEcCCCCCHHHH----HhhcC-C
Confidence 455 6789999999984 2234566777777888775 5643 576666543222 22222 2
Q ss_pred CCCEEEec
Q 018512 181 PKKLLGVT 188 (354)
Q Consensus 181 ~~kviG~t 188 (354)
+.|++|+-
T Consensus 136 ~~r~ig~h 143 (291)
T PRK06035 136 KDRFIGMH 143 (291)
T ss_pred cccEEEEe
Confidence 46788874
No 78
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=98.20 E-value=2.3e-05 Score=74.11 Aligned_cols=167 Identities=15% Similarity=0.053 Sum_probs=96.8
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc---hhHHHHHhcCCCCCeEEEE----eCCCcHHhhhCC--CcEE
Q 018512 44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTGAVVRGF----LGQPQLENALTG--MDLV 114 (354)
Q Consensus 44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~---~g~~~dl~~~~~~~~v~~~----~~~~d~~~al~~--aDvV 114 (354)
||.|+||+|++|++++..|+..+...+|+++|.... .....++... +.+..+ ....++.+++++ +|+|
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~d~v 77 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDN---PRYRFVKGDIGDRELVSRLFTEHQPDAV 77 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccC---CCcEEEEcCCcCHHHHHHHHhhcCCCEE
Confidence 589999999999999999988763338888886431 1111222211 112221 112345566777 8999
Q ss_pred EEcCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCC-CCC----chHHHHHHHHHhCCCCCCCEEEe
Q 018512 115 IIPAGVPRK--PGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP-VNS----TVPIAAEVFKKAGTYDPKKLLGV 187 (354)
Q Consensus 115 Ii~ag~~~~--~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNP-v~~----~~~~~~~~~~~~~~~p~~kviG~ 187 (354)
|++|+.... .......++..|+.....+++.+.+...+..++.+|.. +.. .... .......+...+|.
T Consensus 78 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~-----~e~~~~~~~~~Y~~ 152 (317)
T TIGR01181 78 VHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAF-----TETTPLAPSSPYSA 152 (317)
T ss_pred EEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCc-----CCCCCCCCCCchHH
Confidence 999875421 11233456788999999999999887655455555421 100 0000 01112233445666
Q ss_pred ccchHHHHHHHHHHHhCCCCCCCc-ceEEeec
Q 018512 188 TMLDVVRANTFVAEVLGLDPRDVD-VPVVGGH 218 (354)
Q Consensus 188 t~ld~~r~~~~la~~l~v~~~~v~-~~v~G~h 218 (354)
+.....++...+++..+++..-++ ..++|..
T Consensus 153 sK~~~e~~~~~~~~~~~~~~~i~R~~~i~G~~ 184 (317)
T TIGR01181 153 SKAASDHLVRAYHRTYGLPALITRCSNNYGPY 184 (317)
T ss_pred HHHHHHHHHHHHHHHhCCCeEEEEeccccCCC
Confidence 655555665666777777654443 4566643
No 79
>CHL00194 ycf39 Ycf39; Provisional
Probab=98.19 E-value=1.1e-05 Score=77.34 Aligned_cols=108 Identities=11% Similarity=0.065 Sum_probs=71.9
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEE-EeCCCcHHhhhCCCcEEEEcCCCC
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENALTGMDLVIIPAGVP 121 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~~~d~~~al~~aDvVIi~ag~~ 121 (354)
|||+|+||+|++|++++..|+..|+ +|+.++++.... ..+.+... ..+.. .....++.++++++|+||++++..
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g~--~V~~l~R~~~~~--~~l~~~~v-~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~ 75 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEGY--QVRCLVRNLRKA--SFLKEWGA-ELVYGDLSLPETLPPSFKGVTAIIDASTSR 75 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC--eEEEEEcChHHh--hhHhhcCC-EEEECCCCCHHHHHHHHCCCCEEEECCCCC
Confidence 6999999999999999999999987 899998865211 11121111 11111 112234678899999999986533
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEe
Q 018512 122 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI 158 (354)
Q Consensus 122 ~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~ 158 (354)
.. ...++...|.....++++.+++.+.+-+|.+.
T Consensus 76 ~~---~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~S 109 (317)
T CHL00194 76 PS---DLYNAKQIDWDGKLALIEAAKAAKIKRFIFFS 109 (317)
T ss_pred CC---CccchhhhhHHHHHHHHHHHHHcCCCEEEEec
Confidence 21 12234567888889999999988766444433
No 80
>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.19 E-value=1.5e-05 Score=75.36 Aligned_cols=118 Identities=19% Similarity=0.329 Sum_probs=77.3
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc---hhH--H----HHHhcCC-C--------CCeEEEEeCCCcH
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGV--T----ADISHMD-T--------GAVVRGFLGQPQL 104 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~---~g~--~----~dl~~~~-~--------~~~v~~~~~~~d~ 104 (354)
.||+|||+ |.+|..++..++..|+ +|+++|+++. .+. . .++.+.. . ...++. ++++
T Consensus 4 ~kI~VIG~-G~mG~~ia~~la~~g~--~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~l~~---~~~~ 77 (282)
T PRK05808 4 QKIGVIGA-GTMGNGIAQVCAVAGY--DVVMVDISDAAVDRGLATITKSLDRLVKKGKMTEADKEAALARITG---TTDL 77 (282)
T ss_pred cEEEEEcc-CHHHHHHHHHHHHCCC--ceEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEE---eCCH
Confidence 48999999 9999999999999988 8999999861 111 0 1111111 0 012332 3465
Q ss_pred HhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCC-CeEEEEecCCCCCchHHHHHHHHHhCCCCCCC
Q 018512 105 ENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNSTVPIAAEVFKKAGTYDPKK 183 (354)
Q Consensus 105 ~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p-~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~k 183 (354)
+++++||+||+++ ..+....+++.+.+.++++ ++++ .||-.++-...+ ....+.| .|
T Consensus 78 -~~~~~aDlVi~av--------------~e~~~~k~~~~~~l~~~~~~~~il--~s~ts~~~~~~l----a~~~~~~-~r 135 (282)
T PRK05808 78 -DDLKDADLVIEAA--------------TENMDLKKKIFAQLDEIAKPEAIL--ATNTSSLSITEL----AAATKRP-DK 135 (282)
T ss_pred -HHhccCCeeeecc--------------cccHHHHHHHHHHHHhhCCCCcEE--EECCCCCCHHHH----HHhhCCC-cc
Confidence 5689999999984 3445667788888888875 6643 677777554332 2333333 57
Q ss_pred EEEec
Q 018512 184 LLGVT 188 (354)
Q Consensus 184 viG~t 188 (354)
++|+-
T Consensus 136 ~ig~h 140 (282)
T PRK05808 136 VIGMH 140 (282)
T ss_pred eEEee
Confidence 88874
No 81
>PLN02214 cinnamoyl-CoA reductase
Probab=98.18 E-value=3.5e-05 Score=74.77 Aligned_cols=170 Identities=15% Similarity=0.027 Sum_probs=98.3
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCch---hHHHHHhcCCCCCeEEEE----eCCCcHHhhhCCCcEE
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP---GVTADISHMDTGAVVRGF----LGQPQLENALTGMDLV 114 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~---g~~~dl~~~~~~~~v~~~----~~~~d~~~al~~aDvV 114 (354)
.++|.|+||+|++|++++..|+..|. +|+.++++... .....+... ...+..+ ....++.++++++|+|
T Consensus 10 ~~~vlVTGatGfIG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~d~V 85 (342)
T PLN02214 10 GKTVCVTGAGGYIASWIVKILLERGY--TVKGTVRNPDDPKNTHLRELEGG--KERLILCKADLQDYEALKAAIDGCDGV 85 (342)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcC--EEEEEeCCchhhhHHHHHHhhCC--CCcEEEEecCcCChHHHHHHHhcCCEE
Confidence 46899999999999999999999987 88888876421 111122211 1112221 1223456788999999
Q ss_pred EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCC-CCCch-----HHHHHHHHHhCCCC--CCCEEE
Q 018512 115 IIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP-VNSTV-----PIAAEVFKKAGTYD--PKKLLG 186 (354)
Q Consensus 115 Ii~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNP-v~~~~-----~~~~~~~~~~~~~p--~~kviG 186 (354)
|++|+... ....+.+..|+....++++.+++.+.+.+|++.|-. +.... ....|-.+.....+ +...+|
T Consensus 86 ih~A~~~~---~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y~ 162 (342)
T PLN02214 86 FHTASPVT---DDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYC 162 (342)
T ss_pred EEecCCCC---CCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCChhhccccccHHH
Confidence 99998542 234566788999999999999987655444433321 11000 00001000000000 112344
Q ss_pred eccchHHHHHHHHHHHhCCCCCCCc-ceEEeec
Q 018512 187 VTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGH 218 (354)
Q Consensus 187 ~t~ld~~r~~~~la~~l~v~~~~v~-~~v~G~h 218 (354)
.+.....++...+++..|++..-++ ..|+|..
T Consensus 163 ~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~ 195 (342)
T PLN02214 163 YGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPP 195 (342)
T ss_pred HHHHHHHHHHHHHHHHcCCcEEEEeCCceECCC
Confidence 4444455555666666677665554 5778864
No 82
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=98.17 E-value=1.9e-05 Score=76.03 Aligned_cols=113 Identities=17% Similarity=0.211 Sum_probs=75.3
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchh--HHHHHhcCCCCCeEEEE----eCCCcHHhhhCCCcEEE
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTGAVVRGF----LGQPQLENALTGMDLVI 115 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g--~~~dl~~~~~~~~v~~~----~~~~d~~~al~~aDvVI 115 (354)
.++|.|+||+|++|++++..|+..+...+|+++|++.... ...++.. ..+..+ ....++.++++++|+||
T Consensus 4 ~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~----~~~~~v~~Dl~d~~~l~~~~~~iD~Vi 79 (324)
T TIGR03589 4 NKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPA----PCLRFFIGDVRDKERLTRALRGVDYVV 79 (324)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCC----CcEEEEEccCCCHHHHHHHHhcCCEEE
Confidence 4689999999999999999998876333899999865221 1112211 112211 11234567788999999
Q ss_pred EcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512 116 IPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 159 (354)
Q Consensus 116 i~ag~~~~~--g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t 159 (354)
++||....+ ..+..+.+..|+.....+.+.+.+.+... ||++|
T Consensus 80 h~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~-iV~~S 124 (324)
T TIGR03589 80 HAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKR-VVALS 124 (324)
T ss_pred ECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCE-EEEEe
Confidence 999864322 22345678899999999999999875444 44443
No 83
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=98.14 E-value=2.7e-05 Score=75.45 Aligned_cols=164 Identities=15% Similarity=0.103 Sum_probs=92.6
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhC-CCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeC-----CCcHHhhhCCCcEEE
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG-----QPQLENALTGMDLVI 115 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~-~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~-----~~d~~~al~~aDvVI 115 (354)
+|||+|+||+|++|++++..|+.. +. +|+.+|+.... ..++... ..++.+.. ...+.++++++|+||
T Consensus 1 m~~ilVtGatGfiGs~l~~~L~~~~~~--~V~~~~r~~~~--~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~d~Vi 73 (347)
T PRK11908 1 MKKVLILGVNGFIGHHLSKRILETTDW--EVYGMDMQTDR--LGDLVNH---PRMHFFEGDITINKEWIEYHVKKCDVIL 73 (347)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhCCCC--eEEEEeCcHHH--HHHhccC---CCeEEEeCCCCCCHHHHHHHHcCCCEEE
Confidence 469999999999999999999875 55 89999975311 1122111 11222211 112345678999999
Q ss_pred EcCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCC-CCCc---hHHHHHHHHHhCCC------CCCC
Q 018512 116 IPAGVPRK--PGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP-VNST---VPIAAEVFKKAGTY------DPKK 183 (354)
Q Consensus 116 i~ag~~~~--~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNP-v~~~---~~~~~~~~~~~~~~------p~~k 183 (354)
++|+.... ...........|+....++++.+++.. . .+|.+|.. +.-. ..+ .+ ..+-+ ++..
T Consensus 74 H~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~-~-~~v~~SS~~vyg~~~~~~~-~e---e~~~~~~~~~~~p~~ 147 (347)
T PRK11908 74 PLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-K-HLVFPSTSEVYGMCPDEEF-DP---EASPLVYGPINKPRW 147 (347)
T ss_pred ECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcC-C-eEEEEecceeeccCCCcCc-Cc---cccccccCcCCCccc
Confidence 99875322 122334456778899999999988764 3 44444321 1000 000 00 00000 1222
Q ss_pred EEEeccchHHHHHHHHHHHhCCCCCCCc-ceEEeec
Q 018512 184 LLGVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGH 218 (354)
Q Consensus 184 viG~t~ld~~r~~~~la~~l~v~~~~v~-~~v~G~h 218 (354)
.+|.+.....+....+++..|++..-++ +.++|.+
T Consensus 148 ~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~ 183 (347)
T PRK11908 148 IYACSKQLMDRVIWAYGMEEGLNFTLFRPFNWIGPG 183 (347)
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCeEEEeeeeeeCCC
Confidence 4555544444455555666777665554 4677754
No 84
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.11 E-value=2.1e-05 Score=74.27 Aligned_cols=170 Identities=18% Similarity=0.103 Sum_probs=99.2
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCC-cEEEEcCCCC
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGM-DLVIIPAGVP 121 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~a-DvVIi~ag~~ 121 (354)
|+|.|+||+|++|++++..|+..|+ +|+.+|+........+ .+... .... ........+++++. |.||++|+..
T Consensus 1 ~~ILVtG~tGfiG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~-~~~~~-~~~d-~~~~~~~~~~~~~~~d~vih~aa~~ 75 (314)
T COG0451 1 MRILVTGGAGFIGSHLVERLLAAGH--DVRGLDRLRDGLDPLL-SGVEF-VVLD-LTDRDLVDELAKGVPDAVIHLAAQS 75 (314)
T ss_pred CeEEEEcCcccHHHHHHHHHHhCCC--eEEEEeCCCccccccc-cccce-eeec-ccchHHHHHHHhcCCCEEEEccccC
Confidence 4599999999999999999999988 9999998652111111 11110 0000 00112234566777 9999998876
Q ss_pred CCCCCCH---HHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCch---HHHHHHHHHhCCCCCCCEEEeccchHHHH
Q 018512 122 RKPGMTR---DDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTV---PIAAEVFKKAGTYDPKKLLGVTMLDVVRA 195 (354)
Q Consensus 122 ~~~g~~r---~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~---~~~~~~~~~~~~~p~~kviG~t~ld~~r~ 195 (354)
..++..+ .++...|+...+++++.+++....-+|...|..+..-. ..+.|-. ....| ...+|.+.+...+.
T Consensus 76 ~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~--~~~~p-~~~Yg~sK~~~E~~ 152 (314)
T COG0451 76 SVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDPPPLPIDEDL--GPPRP-LNPYGVSKLAAEQL 152 (314)
T ss_pred chhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCCCCCCCccccc--CCCCC-CCHHHHHHHHHHHH
Confidence 5444332 35789999999999999998333333332221211100 0001100 11112 12466676666666
Q ss_pred HHHHHHHhCCCCCCCc-ceEEeecCC
Q 018512 196 NTFVAEVLGLDPRDVD-VPVVGGHAG 220 (354)
Q Consensus 196 ~~~la~~l~v~~~~v~-~~v~G~hg~ 220 (354)
-...++..|++..-++ ..++|....
T Consensus 153 ~~~~~~~~~~~~~ilR~~~vyGp~~~ 178 (314)
T COG0451 153 LRAYARLYGLPVVILRPFNVYGPGDK 178 (314)
T ss_pred HHHHHHHhCCCeEEEeeeeeeCCCCC
Confidence 5666666677777776 468886544
No 85
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=98.10 E-value=3e-05 Score=73.80 Aligned_cols=112 Identities=18% Similarity=0.211 Sum_probs=75.0
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEE-EeCCCcHHhhhCCCcEEEEcCCCC
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENALTGMDLVIIPAGVP 121 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~~~d~~~al~~aDvVIi~ag~~ 121 (354)
|||.|+||+|++|+.++..|+..+. +|+++|++.... .++.+... ..+.. .....++.++++++|+||++++..
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~--~~~~~~~~-~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~ 75 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGE--EVRVLVRPTSDR--RNLEGLDV-EIVEGDLRDPASLRKAVAGCRALFHVAADY 75 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCC--EEEEEEecCccc--cccccCCc-eEEEeeCCCHHHHHHHHhCCCEEEEeceec
Confidence 5899999999999999999998887 899999865211 11111110 11111 111234567789999999998754
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512 122 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 159 (354)
Q Consensus 122 ~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t 159 (354)
........+....|+.....+++.+.+.+.+.+|.+.|
T Consensus 76 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS 113 (328)
T TIGR03466 76 RLWAPDPEEMYAANVEGTRNLLRAALEAGVERVVYTSS 113 (328)
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEec
Confidence 33334456677889999999999988775444444333
No 86
>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated
Probab=98.10 E-value=2.8e-05 Score=79.51 Aligned_cols=120 Identities=21% Similarity=0.280 Sum_probs=77.0
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc---hh--HHHH----HhcCCC---------CCeEEEEeCCCcH
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PG--VTAD----ISHMDT---------GAVVRGFLGQPQL 104 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~---~g--~~~d----l~~~~~---------~~~v~~~~~~~d~ 104 (354)
.||+|||+ |.+|..+|..++..|+ +|+++|+++. .+ ...+ +..... ...++. ++++
T Consensus 8 ~~V~VIGa-G~MG~gIA~~la~aG~--~V~l~D~~~e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~---~~~~ 81 (507)
T PRK08268 8 ATVAVIGA-GAMGAGIAQVAAQAGH--TVLLYDARAGAAAAARDGIAARLAKLVEKGKLTAEQADAALARLRP---VEAL 81 (507)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEE---eCCH
Confidence 58999999 9999999999999998 9999999871 11 1111 111110 012333 3465
Q ss_pred HhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHhCCCCCCC
Q 018512 105 ENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKK 183 (354)
Q Consensus 105 ~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~k 183 (354)
+++++||+||.+. .++..+.+.+...+.+.+ |++ |++||...+-..-+ ...... ++|
T Consensus 82 -~~~~~aDlViEav--------------~E~~~vK~~vf~~l~~~~~~~a--ilasntStl~i~~l----a~~~~~-p~r 139 (507)
T PRK08268 82 -ADLADCDLVVEAI--------------VERLDVKQALFAQLEAIVSPDC--ILATNTSSLSITAI----AAALKH-PER 139 (507)
T ss_pred -HHhCCCCEEEEcC--------------cccHHHHHHHHHHHHhhCCCCc--EEEECCCCCCHHHH----HhhcCC-ccc
Confidence 5688999999983 455667777778888887 566 44566665443222 222233 467
Q ss_pred EEEeccc
Q 018512 184 LLGVTML 190 (354)
Q Consensus 184 viG~t~l 190 (354)
++|+-.+
T Consensus 140 ~~G~hff 146 (507)
T PRK08268 140 VAGLHFF 146 (507)
T ss_pred EEEEeec
Confidence 7776433
No 87
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.08 E-value=2.2e-05 Score=75.09 Aligned_cols=120 Identities=23% Similarity=0.334 Sum_probs=70.5
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHH----hcC---C----CCCeEEEEeCCCcHHhhh
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADI----SHM---D----TGAVVRGFLGQPQLENAL 108 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl----~~~---~----~~~~v~~~~~~~d~~~al 108 (354)
.+||+|||+ |.+|..++..|+..|+ +|+++|.++. ......+ ... . ....++. ++++.+++
T Consensus 4 ~~~I~vIGa-G~mG~~iA~~l~~~g~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~---~~~~~~~~ 77 (311)
T PRK06130 4 IQNLAIIGA-GTMGSGIAALFARKGL--QVVLIDVMEGALERARGVIERALGVYAPLGIASAGMGRIRM---EAGLAAAV 77 (311)
T ss_pred ccEEEEECC-CHHHHHHHHHHHhCCC--eEEEEECCHHHHHHHHHHHHHHHHHhhhcccHHHHhhceEE---eCCHHHHh
Confidence 358999999 9999999999998887 8999999761 1111111 100 0 0011222 34666789
Q ss_pred CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCC-CeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe
Q 018512 109 TGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV 187 (354)
Q Consensus 109 ~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p-~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~ 187 (354)
++||+||++.. .......++...+..+++ +.+ ++||...+...- +..... .+.+++|+
T Consensus 78 ~~aDlVi~av~--------------~~~~~~~~v~~~l~~~~~~~~i--i~s~tsg~~~~~----l~~~~~-~~~~~ig~ 136 (311)
T PRK06130 78 SGADLVIEAVP--------------EKLELKRDVFARLDGLCDPDTI--FATNTSGLPITA----IAQAVT-RPERFVGT 136 (311)
T ss_pred ccCCEEEEecc--------------CcHHHHHHHHHHHHHhCCCCcE--EEECCCCCCHHH----HHhhcC-CcccEEEE
Confidence 99999999841 122344455556666654 543 346665544321 222211 23577776
Q ss_pred c
Q 018512 188 T 188 (354)
Q Consensus 188 t 188 (354)
.
T Consensus 137 h 137 (311)
T PRK06130 137 H 137 (311)
T ss_pred c
Confidence 4
No 88
>PLN02572 UDP-sulfoquinovose synthase
Probab=98.07 E-value=3e-05 Score=78.05 Aligned_cols=187 Identities=14% Similarity=0.126 Sum_probs=107.8
Q ss_pred hhhhhhcccCCCCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc---hh------------HHHHH---hcC
Q 018512 28 CLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PG------------VTADI---SHM 89 (354)
Q Consensus 28 ~~~~~~~~~~~~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~---~g------------~~~dl---~~~ 89 (354)
+-+.+++.+ +..+.+||.|+||+|++|++++..|+..|. +|+++|+... .. ....+ .+.
T Consensus 34 ~~~~~~~~~-~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 110 (442)
T PLN02572 34 ATPSAPGSS-SSSKKKKVMVIGGDGYCGWATALHLSKRGY--EVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEV 110 (442)
T ss_pred cCCCCCCCC-ccccCCEEEEECCCcHHHHHHHHHHHHCCC--eEEEEeccccccccccccccccccccchHHHHHHHHHh
Confidence 334555555 456668999999999999999999999887 8999985321 00 00011 100
Q ss_pred CCCCeEEEE----eCCCcHHhhhC--CCcEEEEcCCCCCCC-CC-C---HHHHHHHHHHHHHHHHHHHhhhCCCeEEEEe
Q 018512 90 DTGAVVRGF----LGQPQLENALT--GMDLVIIPAGVPRKP-GM-T---RDDLFNINAGIVRTLCEGIAKCCPNATVNLI 158 (354)
Q Consensus 90 ~~~~~v~~~----~~~~d~~~al~--~aDvVIi~ag~~~~~-g~-~---r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~ 158 (354)
. ...++.+ .....+.++++ ++|+||++|+..... .. . ....+..|+....++++.+++++.+..++.+
T Consensus 111 ~-~~~v~~v~~Dl~d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~ 189 (442)
T PLN02572 111 S-GKEIELYVGDICDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKL 189 (442)
T ss_pred h-CCcceEEECCCCCHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEE
Confidence 0 0112221 11123445565 489999998653211 11 1 1233567999999999999988765444443
Q ss_pred c-CCCCCc--hHHHHHH-HH------Hh---CCCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCc-ceEEeecC
Q 018512 159 S-NPVNST--VPIAAEV-FK------KA---GTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGHA 219 (354)
Q Consensus 159 t-NPv~~~--~~~~~~~-~~------~~---~~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~-~~v~G~hg 219 (354)
| .-+... ..+ .+- +. .. .-..+...+|.+.+....+...+++.+|++...++ +.++|.+.
T Consensus 190 SS~~vYG~~~~~~-~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~ 263 (442)
T PLN02572 190 GTMGEYGTPNIDI-EEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRT 263 (442)
T ss_pred ecceecCCCCCCC-cccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCC
Confidence 3 211100 000 000 00 00 01223467888877666777778888888766664 66888753
No 89
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.07 E-value=1.7e-05 Score=75.23 Aligned_cols=121 Identities=21% Similarity=0.343 Sum_probs=72.0
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHH----HHh----cCCCC--------CeEEEEeCCCc
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTA----DIS----HMDTG--------AVVRGFLGQPQ 103 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~----dl~----~~~~~--------~~v~~~~~~~d 103 (354)
.+||+|||+ |.+|..++..|+..|+ +|+++|+++. ..... .+. ..... ..++. +++
T Consensus 4 ~~kI~vIGa-G~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~---~~~ 77 (292)
T PRK07530 4 IKKVGVIGA-GQMGNGIAHVCALAGY--DVLLNDVSADRLEAGLATINGNLARQVAKGKISEEARAAALARIST---ATD 77 (292)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEe---eCC
Confidence 358999999 9999999999999998 9999999861 11111 111 11000 11332 346
Q ss_pred HHhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHhCCCCCC
Q 018512 104 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPK 182 (354)
Q Consensus 104 ~~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~ 182 (354)
+ +++++||+||++.. .+....+.+.+.+.+++ |++++ +||.+.+.... +..... .+.
T Consensus 78 ~-~~~~~aD~Vieavp--------------e~~~~k~~~~~~l~~~~~~~~ii--~s~ts~~~~s~----la~~~~-~~~ 135 (292)
T PRK07530 78 L-EDLADCDLVIEAAT--------------EDETVKRKIFAQLCPVLKPEAIL--ATNTSSISITR----LASATD-RPE 135 (292)
T ss_pred H-HHhcCCCEEEEcCc--------------CCHHHHHHHHHHHHhhCCCCcEE--EEcCCCCCHHH----HHhhcC-Ccc
Confidence 5 56899999999842 12234455566777776 46644 46666544321 122222 235
Q ss_pred CEEEeccc
Q 018512 183 KLLGVTML 190 (354)
Q Consensus 183 kviG~t~l 190 (354)
|++|+..+
T Consensus 136 r~~g~h~~ 143 (292)
T PRK07530 136 RFIGIHFM 143 (292)
T ss_pred cEEEeecc
Confidence 67776433
No 90
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=98.06 E-value=5.8e-05 Score=73.10 Aligned_cols=176 Identities=15% Similarity=0.118 Sum_probs=98.9
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEE----EeCCCcHHhhhC--CCcEEEE
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG----FLGQPQLENALT--GMDLVII 116 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~----~~~~~d~~~al~--~aDvVIi 116 (354)
|||.|+||+|++|++++..|+..|.. .++.+|.....+....+........+.. +....++.++++ ++|+||+
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih 79 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQD-SVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAVMH 79 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCCC-eEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEEEE
Confidence 69999999999999999999988752 4666776431111111221110111211 111223445564 4899999
Q ss_pred cCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHhhhC-------CC-eEEEEecCC-CCCchHHHH--------HHHHHhC
Q 018512 117 PAGVPRK--PGMTRDDLFNINAGIVRTLCEGIAKCC-------PN-ATVNLISNP-VNSTVPIAA--------EVFKKAG 177 (354)
Q Consensus 117 ~ag~~~~--~g~~r~d~~~~n~~~~~~i~~~i~~~~-------p~-a~viv~tNP-v~~~~~~~~--------~~~~~~~ 177 (354)
+|+.... ......+++..|+.....+++.++++. .. ..++.+|-. +.......- ..+....
T Consensus 80 ~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E~~ 159 (352)
T PRK10084 80 LAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTETT 159 (352)
T ss_pred CCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCccccC
Confidence 9986432 112235678899999999999998752 11 234434321 111000000 0000111
Q ss_pred CCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCc-ceEEeecC
Q 018512 178 TYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGHA 219 (354)
Q Consensus 178 ~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~-~~v~G~hg 219 (354)
.+.+...+|.+.....++-..+++.+|++.-.++ ..++|.+.
T Consensus 160 ~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~ 202 (352)
T PRK10084 160 AYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYH 202 (352)
T ss_pred CCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCc
Confidence 2334567788777677776777788887665554 56788653
No 91
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.04 E-value=2.8e-05 Score=73.73 Aligned_cols=100 Identities=20% Similarity=0.262 Sum_probs=63.1
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhH---HHHH-----hcCCC--------CCeEEEEeCCCcH
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGV---TADI-----SHMDT--------GAVVRGFLGQPQL 104 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~---~~dl-----~~~~~--------~~~v~~~~~~~d~ 104 (354)
.||+|||+ |.+|..+|..|+..|+ +|+++|+++. ... ..++ ..... ...++. +.++
T Consensus 2 ~~V~VIG~-G~mG~~iA~~la~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~---~~~~ 75 (288)
T PRK09260 2 EKLVVVGA-GVMGRGIAYVFAVSGF--QTTLVDIKQEQLESAQQEIASIFEQGVARGKLTEAARQAALARLSY---SLDL 75 (288)
T ss_pred cEEEEECc-cHHHHHHHHHHHhCCC--cEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEE---eCcH
Confidence 48999999 9999999999999988 8999999861 111 0111 00000 011332 3567
Q ss_pred HhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCC-CeEEEEecCCCCC
Q 018512 105 ENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNS 164 (354)
Q Consensus 105 ~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p-~a~viv~tNPv~~ 164 (354)
++++++||+||.+.. .+....+.+...+.++++ +++ +++|...+
T Consensus 76 ~~~~~~aD~Vi~avp--------------e~~~~k~~~~~~l~~~~~~~~i--l~~~tSt~ 120 (288)
T PRK09260 76 KAAVADADLVIEAVP--------------EKLELKKAVFETADAHAPAECY--IATNTSTM 120 (288)
T ss_pred HHhhcCCCEEEEecc--------------CCHHHHHHHHHHHHhhCCCCcE--EEEcCCCC
Confidence 788999999999842 123344555556777764 553 34555443
No 92
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=98.04 E-value=3.1e-05 Score=74.16 Aligned_cols=103 Identities=24% Similarity=0.259 Sum_probs=65.0
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hh-H---H---HHHhcCCC---------CCeEEEEeCCCc
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PG-V---T---ADISHMDT---------GAVVRGFLGQPQ 103 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g-~---~---~dl~~~~~---------~~~v~~~~~~~d 103 (354)
.+||+|||+ |.+|++++..|+..|+ +|+++|+++. .. . . ..+..... ...++. +.+
T Consensus 2 ~~~V~VIG~-G~mG~~iA~~la~~G~--~V~v~d~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~i~~---~~~ 75 (308)
T PRK06129 2 MGSVAIIGA-GLIGRAWAIVFARAGH--EVRLWDADPAAAAAAPAYIAGRLEDLAAFDLLDGEAPDAVLARIRV---TDS 75 (308)
T ss_pred CcEEEEECc-cHHHHHHHHHHHHCCC--eeEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCchhhHHHHhcCeEE---ECc
Confidence 368999998 9999999999999998 9999999861 11 0 0 01211110 011332 357
Q ss_pred HHhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCc
Q 018512 104 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNST 165 (354)
Q Consensus 104 ~~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~ 165 (354)
+.+++++||+|+.+.. .+....+.+...+.+..++..++ .||.....
T Consensus 76 ~~~a~~~ad~Vi~avp--------------e~~~~k~~~~~~l~~~~~~~~ii-~ssts~~~ 122 (308)
T PRK06129 76 LADAVADADYVQESAP--------------ENLELKRALFAELDALAPPHAIL-ASSTSALL 122 (308)
T ss_pred HHHhhCCCCEEEECCc--------------CCHHHHHHHHHHHHHhCCCcceE-EEeCCCCC
Confidence 7788999999999841 12234444555677666655444 45554433
No 93
>PLN02545 3-hydroxybutyryl-CoA dehydrogenase
Probab=98.03 E-value=6.5e-05 Score=71.44 Aligned_cols=103 Identities=22% Similarity=0.319 Sum_probs=64.5
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCch-hHH--------HHHhcCCC-C-----CeEEEEeCCCcHHhh
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVT--------ADISHMDT-G-----AVVRGFLGQPQLENA 107 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~-g~~--------~dl~~~~~-~-----~~v~~~~~~~d~~~a 107 (354)
.||+|||+ |.+|..+|..|+..|. +|+++|.++.. ... .++.+... . ..+.....+++. ++
T Consensus 5 ~~V~vIG~-G~mG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~ 80 (295)
T PLN02545 5 KKVGVVGA-GQMGSGIAQLAAAAGM--DVWLLDSDPAALSRGLDSISSSLARLVKKGKMSQEEADATLGRIRCTTNL-EE 80 (295)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceEeeCCH-HH
Confidence 58999999 9999999999999887 99999997611 110 11211110 0 001111123454 67
Q ss_pred hCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCc
Q 018512 108 LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNST 165 (354)
Q Consensus 108 l~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~ 165 (354)
+++||+||.+. .++......+...+.++. |+++ ++||-..+.
T Consensus 81 ~~~aD~Vieav--------------~e~~~~k~~v~~~l~~~~~~~~i--l~s~tS~i~ 123 (295)
T PLN02545 81 LRDADFIIEAI--------------VESEDLKKKLFSELDRICKPSAI--LASNTSSIS 123 (295)
T ss_pred hCCCCEEEEcC--------------ccCHHHHHHHHHHHHhhCCCCcE--EEECCCCCC
Confidence 89999999984 333455666666677766 5663 346666554
No 94
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=98.03 E-value=8.5e-05 Score=71.83 Aligned_cols=159 Identities=13% Similarity=0.021 Sum_probs=90.7
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc---hhHHHHHh-cCC--CCCeEEEE----eCCCcHHhhhCC--
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADIS-HMD--TGAVVRGF----LGQPQLENALTG-- 110 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~---~g~~~dl~-~~~--~~~~v~~~----~~~~d~~~al~~-- 110 (354)
++|.|+||+|++|++++..|+..|. +|+++|+... ......+. +.. ....+..+ .....+.+++++
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~ 78 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGY--EVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIK 78 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCC--EEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCC
Confidence 4899999999999999999999888 8999998642 11111121 000 01112221 111234456664
Q ss_pred CcEEEEcCCCCCCC-C-CCHHHHHHHHHHHHHHHHHHHhhhCC-C-eEEEEec-CCCCC-chHHHHHHHHHhCCCCCCCE
Q 018512 111 MDLVIIPAGVPRKP-G-MTRDDLFNINAGIVRTLCEGIAKCCP-N-ATVNLIS-NPVNS-TVPIAAEVFKKAGTYDPKKL 184 (354)
Q Consensus 111 aDvVIi~ag~~~~~-g-~~r~d~~~~n~~~~~~i~~~i~~~~p-~-a~viv~t-NPv~~-~~~~~~~~~~~~~~~p~~kv 184 (354)
.|+||++|+..... . ......+..|+....++++.+.+.+- + ..++.+| .-+.- .... .......+.+...
T Consensus 79 ~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~---~~~E~~~~~p~~~ 155 (343)
T TIGR01472 79 PTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEI---PQNETTPFYPRSP 155 (343)
T ss_pred CCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCC---CCCCCCCCCCCCh
Confidence 59999999864321 1 11234446688888999999988652 2 2444433 21110 0000 0011112334556
Q ss_pred EEeccchHHHHHHHHHHHhCCC
Q 018512 185 LGVTMLDVVRANTFVAEVLGLD 206 (354)
Q Consensus 185 iG~t~ld~~r~~~~la~~l~v~ 206 (354)
+|.+.+...++...+++.+|++
T Consensus 156 Y~~sK~~~e~~~~~~~~~~~~~ 177 (343)
T TIGR01472 156 YAAAKLYAHWITVNYREAYGLF 177 (343)
T ss_pred hHHHHHHHHHHHHHHHHHhCCc
Confidence 7777666777777777777765
No 95
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=98.03 E-value=0.0001 Score=71.51 Aligned_cols=176 Identities=16% Similarity=0.098 Sum_probs=98.8
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEE----EeCCCcHHhhhCC--CcEEEE
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG----FLGQPQLENALTG--MDLVII 116 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~----~~~~~d~~~al~~--aDvVIi 116 (354)
+||.|+||+|++|++++..|+..+.. .++++|.....+....+.+......+.. +....++.+++++ +|+||+
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~~g~~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih 80 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINETSD-AVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMH 80 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHHcCCC-EEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEEEE
Confidence 58999999999999999999988852 4667786532111112221110111111 1112234556664 899999
Q ss_pred cCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhC-------CC-eEEEEecCC-CCCchHHHHHHHHHhCCCCCCCEE
Q 018512 117 PAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCC-------PN-ATVNLISNP-VNSTVPIAAEVFKKAGTYDPKKLL 185 (354)
Q Consensus 117 ~ag~~~~~--g~~r~d~~~~n~~~~~~i~~~i~~~~-------p~-a~viv~tNP-v~~~~~~~~~~~~~~~~~p~~kvi 185 (354)
+|+..... .......+..|+.....+++.+.++. +. ..++.+|.. +.....-....+.......+...+
T Consensus 81 ~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~~~~~p~s~Y 160 (355)
T PRK10217 81 LAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPY 160 (355)
T ss_pred CCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCCCCCCCCChh
Confidence 99865321 11235567889999999999998752 11 244444432 110000000000011122334557
Q ss_pred EeccchHHHHHHHHHHHhCCCCCCCc-ceEEeecC
Q 018512 186 GVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGHA 219 (354)
Q Consensus 186 G~t~ld~~r~~~~la~~l~v~~~~v~-~~v~G~hg 219 (354)
|.+.+...++...+++.++++..-++ ..++|.+.
T Consensus 161 ~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~ 195 (355)
T PRK10217 161 SASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYH 195 (355)
T ss_pred HHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCC
Confidence 77776667777777888887665554 56778653
No 96
>PRK06194 hypothetical protein; Provisional
Probab=98.02 E-value=7e-05 Score=70.23 Aligned_cols=159 Identities=19% Similarity=0.138 Sum_probs=90.5
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCC---cHHhhhC------
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQP---QLENALT------ 109 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~---d~~~al~------ 109 (354)
.++|.|+||+|++|++++..|+..|. +|+++|++. ......++.... ..+..+. +-+ +++++++
T Consensus 6 ~k~vlVtGasggIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~~~~~~~ 81 (287)
T PRK06194 6 GKVAVITGAASGFGLAFARIGAALGM--KLVLADVQQDALDRAVAELRAQG--AEVLGVRTDVSDAAQVEALADAALERF 81 (287)
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhcC--CeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 35899999999999999999999987 899999875 222333333221 2222221 112 2333333
Q ss_pred -CCcEEEEcCCCCCCC---CCCHH---HHHHHHHHHHHH----HHHHHhhhCCC-----eEEEEecCCCCCchHHHHHHH
Q 018512 110 -GMDLVIIPAGVPRKP---GMTRD---DLFNINAGIVRT----LCEGIAKCCPN-----ATVNLISNPVNSTVPIAAEVF 173 (354)
Q Consensus 110 -~aDvVIi~ag~~~~~---g~~r~---d~~~~n~~~~~~----i~~~i~~~~p~-----a~viv~tNPv~~~~~~~~~~~ 173 (354)
..|+||++||..... ..+.. ..+..|+..... +.+.+.+.+.+ +.++++|.-....
T Consensus 82 g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~-------- 153 (287)
T PRK06194 82 GAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLL-------- 153 (287)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhcc--------
Confidence 469999999875321 12222 234556554444 44445555432 5566655422111
Q ss_pred HHhCCCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEEe
Q 018512 174 KKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG 216 (354)
Q Consensus 174 ~~~~~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~G 216 (354)
+.|..-.++.+......+...++..++.....+++..+.
T Consensus 154 ----~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~ 192 (287)
T PRK06194 154 ----APPAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLC 192 (287)
T ss_pred ----CCCCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEE
Confidence 233334566655555566777777777665566554444
No 97
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=98.02 E-value=6.4e-05 Score=73.03 Aligned_cols=173 Identities=17% Similarity=0.097 Sum_probs=96.0
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchh--HHHHHhcCCCCCeEEEEeC----CCcHHhhhCCCcEE
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTGAVVRGFLG----QPQLENALTGMDLV 114 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g--~~~dl~~~~~~~~v~~~~~----~~d~~~al~~aDvV 114 (354)
..|||.|+||+|++|++++..|+..|. +|++++++.... ...++.. ...+..+.. ..++.+++++.|+|
T Consensus 9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~d~V 83 (353)
T PLN02896 9 ATGTYCVTGATGYIGSWLVKLLLQRGY--TVHATLRDPAKSLHLLSKWKE---GDRLRLFRADLQEEGSFDEAVKGCDGV 83 (353)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHhhcc---CCeEEEEECCCCCHHHHHHHHcCCCEE
Confidence 357999999999999999999999887 888888764211 1112211 122222211 12345677899999
Q ss_pred EEcCCCCCCC---C-CCHHH-----HHHHHHHHHHHHHHHHhhhCCCeEEEEecC-CCCCch-------HHHHHH----H
Q 018512 115 IIPAGVPRKP---G-MTRDD-----LFNINAGIVRTLCEGIAKCCPNATVNLISN-PVNSTV-------PIAAEV----F 173 (354)
Q Consensus 115 Ii~ag~~~~~---g-~~r~d-----~~~~n~~~~~~i~~~i~~~~p~a~viv~tN-Pv~~~~-------~~~~~~----~ 173 (354)
|++|+..... . ....+ .+..|+....++++.+++...-..++++|. -+.... ....|- +
T Consensus 84 ih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~ 163 (353)
T PLN02896 84 FHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPI 163 (353)
T ss_pred EECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCcH
Confidence 9999864321 1 11222 233445788888888877642223444432 111100 000000 0
Q ss_pred HH-hCCCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCc-ceEEeec
Q 018512 174 KK-AGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGH 218 (354)
Q Consensus 174 ~~-~~~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~-~~v~G~h 218 (354)
.. ....++.-.+|.+.+...++...+++..|++..-++ ..++|.+
T Consensus 164 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~ 210 (353)
T PLN02896 164 DHVWNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPF 210 (353)
T ss_pred HHhhccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCC
Confidence 00 000112225777766667777777877787655554 5667754
No 98
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated
Probab=98.02 E-value=4.7e-05 Score=77.74 Aligned_cols=103 Identities=15% Similarity=0.152 Sum_probs=67.7
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCch-hHHHH--------HhcCC---C--CCeEEEEeCCCcHHhhh
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTAD--------ISHMD---T--GAVVRGFLGQPQLENAL 108 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~-g~~~d--------l~~~~---~--~~~v~~~~~~~d~~~al 108 (354)
+||+|||+ |.+|+.+|..|+..|+ +|+++|+++.. ....+ +.... . ...++. ++++.+++
T Consensus 5 ~kIavIG~-G~MG~~iA~~la~~G~--~V~v~D~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~~---~~~~~ea~ 78 (495)
T PRK07531 5 MKAACIGG-GVIGGGWAARFLLAGI--DVAVFDPHPEAERIIGEVLANAERAYAMLTDAPLPPEGRLTF---CASLAEAV 78 (495)
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHhhhccchhhhhhceEe---eCCHHHHh
Confidence 58999999 9999999999999998 99999998621 11110 11000 0 011332 35677889
Q ss_pred CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCch
Q 018512 109 TGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTV 166 (354)
Q Consensus 109 ~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~ 166 (354)
++||+||.+. ..+..+.+.+...+.++++... ++.||..++..
T Consensus 79 ~~aD~Vieav--------------pe~~~vk~~l~~~l~~~~~~~~-iI~SsTsgi~~ 121 (495)
T PRK07531 79 AGADWIQESV--------------PERLDLKRRVLAEIDAAARPDA-LIGSSTSGFLP 121 (495)
T ss_pred cCCCEEEEcC--------------cCCHHHHHHHHHHHHhhCCCCc-EEEEcCCCCCH
Confidence 9999999974 2234455666666777775442 45677777554
No 99
>PLN02778 3,5-epimerase/4-reductase
Probab=98.01 E-value=9.9e-05 Score=70.30 Aligned_cols=97 Identities=22% Similarity=0.175 Sum_probs=66.0
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhh--CCCcEEEEc
Q 018512 40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENAL--TGMDLVIIP 117 (354)
Q Consensus 40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al--~~aDvVIi~ 117 (354)
...|||.|+||+|++|++++..|...|+ +|++...+. .+. ..+..++ .++|+||++
T Consensus 7 ~~~~kiLVtG~tGfiG~~l~~~L~~~g~--~V~~~~~~~--------~~~------------~~v~~~l~~~~~D~ViH~ 64 (298)
T PLN02778 7 SATLKFLIYGKTGWIGGLLGKLCQEQGI--DFHYGSGRL--------ENR------------ASLEADIDAVKPTHVFNA 64 (298)
T ss_pred CCCCeEEEECCCCHHHHHHHHHHHhCCC--EEEEecCcc--------CCH------------HHHHHHHHhcCCCEEEEC
Confidence 3458999999999999999999999887 776543221 000 0011222 268999999
Q ss_pred CCCCCCCC-----CCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512 118 AGVPRKPG-----MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 159 (354)
Q Consensus 118 ag~~~~~g-----~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t 159 (354)
|+....+. ....+....|+....++++.+++.+.+ ++++.|
T Consensus 65 Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~-~v~~sS 110 (298)
T PLN02778 65 AGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERGLV-LTNYAT 110 (298)
T ss_pred CcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCC-EEEEec
Confidence 98653221 234567889999999999999988654 344333
No 100
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=98.01 E-value=7.3e-05 Score=71.82 Aligned_cols=111 Identities=18% Similarity=0.202 Sum_probs=70.3
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCC-CCCe-EEE-EeCCCcHHhhhC--CCcEEE
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMD-TGAV-VRG-FLGQPQLENALT--GMDLVI 115 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~-~~~~-v~~-~~~~~d~~~al~--~aDvVI 115 (354)
|||.|+||+|++|++++..|+..+. +|+++|+.. .......+.+.. .... +.. ......+.++++ ++|+||
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vv 78 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQNGH--DVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVI 78 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHCCC--eEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEE
Confidence 6999999999999999999998887 899998643 111111122211 1111 111 111112334454 689999
Q ss_pred EcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEE
Q 018512 116 IPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATV 155 (354)
Q Consensus 116 i~ag~~~~~--g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~v 155 (354)
++|+..... .....+.+..|+.....+++.+++...+.+|
T Consensus 79 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v 120 (338)
T PRK10675 79 HFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLI 120 (338)
T ss_pred ECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEE
Confidence 998764321 1234567888999999999999877544444
No 101
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=97.98 E-value=0.00023 Score=68.16 Aligned_cols=175 Identities=16% Similarity=0.062 Sum_probs=97.7
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCch-hHHHHHhc-CCCCCeEEEE----eCCCcHHhhhCCCcEEE
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISH-MDTGAVVRGF----LGQPQLENALTGMDLVI 115 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~-g~~~dl~~-~~~~~~v~~~----~~~~d~~~al~~aDvVI 115 (354)
.++|.|+||+|++|++++..|+..|. +|++.+++... .....+.. ......+..+ ....++.++++++|+||
T Consensus 5 ~k~vlVtG~~G~IG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 82 (325)
T PLN02989 5 GKVVCVTGASGYIASWIVKLLLFRGY--TINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVF 82 (325)
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCC--EEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEE
Confidence 46899999999999999999999988 88887766521 11111111 1111122221 12234567788999999
Q ss_pred EcCCCCCCC-C-CCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecC-CCCCchH--HH-HHHHHHhCCCC------CCC
Q 018512 116 IPAGVPRKP-G-MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN-PVNSTVP--IA-AEVFKKAGTYD------PKK 183 (354)
Q Consensus 116 i~ag~~~~~-g-~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tN-Pv~~~~~--~~-~~~~~~~~~~p------~~k 183 (354)
++|+..... . ......+..|+....++.+.+.++.....|+++|. .+..-.. .. ...+....... +..
T Consensus 83 h~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~ 162 (325)
T PLN02989 83 HTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQ 162 (325)
T ss_pred EeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhccccc
Confidence 999854211 1 12245667899999999999887642234444432 1110000 00 00000100011 123
Q ss_pred EEEeccchHHHHHHHHHHHhCCCCCCCc-ceEEeec
Q 018512 184 LLGVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGH 218 (354)
Q Consensus 184 viG~t~ld~~r~~~~la~~l~v~~~~v~-~~v~G~h 218 (354)
.+|.+.+...++...+++..|++..-++ +.++|..
T Consensus 163 ~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~ 198 (325)
T PLN02989 163 WYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPI 198 (325)
T ss_pred chHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCC
Confidence 5666666566666666777777655554 5677754
No 102
>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=97.98 E-value=0.00014 Score=69.48 Aligned_cols=117 Identities=21% Similarity=0.386 Sum_probs=78.1
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHh--cCC--C------CCeEEEEeCCCcHHhhhCCC
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADIS--HMD--T------GAVVRGFLGQPQLENALTGM 111 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~--~~~--~------~~~v~~~~~~~d~~~al~~a 111 (354)
++||+|+|+ |.-|+++|..|..+++ +|+|+.+++. .+.++. |.. + .+.++ .++|+.+++++|
T Consensus 1 ~~kI~ViGa-GswGTALA~~la~ng~--~V~lw~r~~~--~~~~i~~~~~N~~yLp~i~lp~~l~---at~Dl~~a~~~a 72 (329)
T COG0240 1 MMKIAVIGA-GSWGTALAKVLARNGH--EVRLWGRDEE--IVAEINETRENPKYLPGILLPPNLK---ATTDLAEALDGA 72 (329)
T ss_pred CceEEEEcC-ChHHHHHHHHHHhcCC--eeEEEecCHH--HHHHHHhcCcCccccCCccCCcccc---cccCHHHHHhcC
Confidence 479999999 9999999999999997 9999999762 222232 221 1 12233 357899999999
Q ss_pred cEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEec---CCCCCchHHHHHHHHHhCCCCCCCEEEe
Q 018512 112 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLIS---NPVNSTVPIAAEVFKKAGTYDPKKLLGV 187 (354)
Q Consensus 112 DvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~t---NPv~~~~~~~~~~~~~~~~~p~~kviG~ 187 (354)
|+||+.. | ...++++++++..+- ++..++.+| +|-.. .++++++++. +|.++ ++.
T Consensus 73 d~iv~av--P--------------s~~~r~v~~~l~~~l~~~~~iv~~sKGie~~t~--~l~seii~e~--l~~~~-~~v 131 (329)
T COG0240 73 DIIVIAV--P--------------SQALREVLRQLKPLLLKDAIIVSATKGLEPETG--RLLSEIIEEE--LPDNP-IAV 131 (329)
T ss_pred CEEEEEC--C--------------hHHHHHHHHHHhhhccCCCeEEEEeccccCCCc--chHHHHHHHH--cCCCe-EEE
Confidence 9999973 3 235666777775443 677777776 44322 2336666665 44444 444
No 103
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=97.97 E-value=0.00017 Score=76.19 Aligned_cols=180 Identities=15% Similarity=0.025 Sum_probs=97.2
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeC-CCc---HHhhh--CCCcE
Q 018512 40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG-QPQ---LENAL--TGMDL 113 (354)
Q Consensus 40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~-~~d---~~~al--~~aDv 113 (354)
.+++||.|+||+|++|++++..|+..+...+|+.+|..........+........++.+.. -.| +...+ .++|+
T Consensus 4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~ 83 (668)
T PLN02260 4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGIDT 83 (668)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCCCE
Confidence 3567999999999999999999998754448999997531111111111101122332211 112 22223 68999
Q ss_pred EEEcCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecC-CCCCchHHHH-HHHHHhCCCCCCCEEEecc
Q 018512 114 VIIPAGVPRKPG--MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN-PVNSTVPIAA-EVFKKAGTYDPKKLLGVTM 189 (354)
Q Consensus 114 VIi~ag~~~~~g--~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tN-Pv~~~~~~~~-~~~~~~~~~p~~kviG~t~ 189 (354)
||++|+...... ....++...|+.....+++.+++.+.-..+|.+|. -+.-...--. ........+.+...+|.+.
T Consensus 84 ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~~p~~~Y~~sK 163 (668)
T PLN02260 84 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQLLPTNPYSATK 163 (668)
T ss_pred EEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccCCCCCCCCcHHHH
Confidence 999998653211 12345678899999999999998763233444432 1100000000 0000000111234566665
Q ss_pred chHHHHHHHHHHHhCCCCCCCc-ceEEeecC
Q 018512 190 LDVVRANTFVAEVLGLDPRDVD-VPVVGGHA 219 (354)
Q Consensus 190 ld~~r~~~~la~~l~v~~~~v~-~~v~G~hg 219 (354)
+...++-..+++..+++..-++ ..++|.+.
T Consensus 164 ~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~ 194 (668)
T PLN02260 164 AGAEMLVMAYGRSYGLPVITTRGNNVYGPNQ 194 (668)
T ss_pred HHHHHHHHHHHHHcCCCEEEECcccccCcCC
Confidence 5555555555666676654444 56777653
No 104
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=97.92 E-value=0.00016 Score=63.08 Aligned_cols=93 Identities=26% Similarity=0.300 Sum_probs=66.0
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeC-C---CcHHhhhCCCcEEEEcCCC
Q 018512 45 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG-Q---PQLENALTGMDLVIIPAGV 120 (354)
Q Consensus 45 I~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~-~---~d~~~al~~aDvVIi~ag~ 120 (354)
|+|+||+|++|+.++..|+.+++ +|+++-+++.+. .+ + +.++.+.. . .++.++++++|.||.++|.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~--~V~~~~R~~~~~--~~--~----~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~ 70 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGH--EVTALVRSPSKA--ED--S----PGVEIIQGDLFDPDSVKAALKGADAVIHAAGP 70 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTS--EEEEEESSGGGH--HH--C----TTEEEEESCTTCHHHHHHHHTTSSEEEECCHS
T ss_pred eEEECCCChHHHHHHHHHHHCCC--EEEEEecCchhc--cc--c----cccccceeeehhhhhhhhhhhhcchhhhhhhh
Confidence 78999999999999999999996 999999876321 11 1 22332211 1 2357889999999999865
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEe
Q 018512 121 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI 158 (354)
Q Consensus 121 ~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~ 158 (354)
+.+ | ....+.+++.+++.+..-+|++.
T Consensus 71 ~~~------~-----~~~~~~~~~a~~~~~~~~~v~~s 97 (183)
T PF13460_consen 71 PPK------D-----VDAAKNIIEAAKKAGVKRVVYLS 97 (183)
T ss_dssp TTT------H-----HHHHHHHHHHHHHTTSSEEEEEE
T ss_pred hcc------c-----ccccccccccccccccccceeee
Confidence 543 1 67788888888887655444433
No 105
>PLN02583 cinnamoyl-CoA reductase
Probab=97.91 E-value=0.00027 Score=67.13 Aligned_cols=112 Identities=15% Similarity=0.118 Sum_probs=72.3
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCch----hHHHHHhcCCCCCeEEEE----eCCCcHHhhhCCCcE
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP----GVTADISHMDTGAVVRGF----LGQPQLENALTGMDL 113 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~----g~~~dl~~~~~~~~v~~~----~~~~d~~~al~~aDv 113 (354)
.++|+|+||+|++|++++..|+.+|+ +|++.+++... ....++.... ..+..+ ....++.+++.++|.
T Consensus 6 ~k~vlVTGatG~IG~~lv~~Ll~~G~--~V~~~~R~~~~~~~~~~~~~l~~~~--~~~~~~~~Dl~d~~~~~~~l~~~d~ 81 (297)
T PLN02583 6 SKSVCVMDASGYVGFWLVKRLLSRGY--TVHAAVQKNGETEIEKEIRGLSCEE--ERLKVFDVDPLDYHSILDALKGCSG 81 (297)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCC--EEEEEEcCchhhhHHHHHHhcccCC--CceEEEEecCCCHHHHHHHHcCCCE
Confidence 35899999999999999999999998 88888774311 1112221111 112221 122345678999999
Q ss_pred EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEE
Q 018512 114 VIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNL 157 (354)
Q Consensus 114 VIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv 157 (354)
|+..++.+........+.+..|+.....+.+.+.+.. ...+|++
T Consensus 82 v~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~ 126 (297)
T PLN02583 82 LFCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFT 126 (297)
T ss_pred EEEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEe
Confidence 9987654432111234677889999999999988763 3444433
No 106
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=97.91 E-value=0.00014 Score=74.79 Aligned_cols=116 Identities=14% Similarity=0.064 Sum_probs=73.6
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhc-----CCC--CCeEEEE----eCCCcHHhhh
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISH-----MDT--GAVVRGF----LGQPQLENAL 108 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~-----~~~--~~~v~~~----~~~~d~~~al 108 (354)
...|+|+||+|++|+.++..|+..|. +|++++++.. .....++.+ ... ...+..+ ....++.+++
T Consensus 80 gKvVLVTGATGgIG~aLAr~LLk~G~--~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aL 157 (576)
T PLN03209 80 EDLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPAL 157 (576)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHh
Confidence 45799999999999999999999887 8999998762 212222211 010 0112221 1112455678
Q ss_pred CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512 109 TGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 159 (354)
Q Consensus 109 ~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t 159 (354)
.++|+||+++|............+..|.....++++.+.+.+...+|++.|
T Consensus 158 ggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSS 208 (576)
T PLN03209 158 GNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTS 208 (576)
T ss_pred cCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEcc
Confidence 999999999886533211222345668888899999988776554444444
No 107
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=97.90 E-value=0.00035 Score=66.82 Aligned_cols=106 Identities=17% Similarity=0.131 Sum_probs=68.0
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc-hhHHHHHhcC-CCCCeEEEE----eCCCcHHhhhCCCcEEE
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHM-DTGAVVRGF----LGQPQLENALTGMDLVI 115 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~-~g~~~dl~~~-~~~~~v~~~----~~~~d~~~al~~aDvVI 115 (354)
.++|.|+||+|++|++++..|+..|. +|++..++.. ......+... .....+..+ .....+.++++++|+||
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi 82 (322)
T PLN02986 5 GKLVCVTGASGYIASWIVKLLLLRGY--TVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVF 82 (322)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEE
Confidence 35999999999999999999999887 7776555442 1122222211 111122222 11234567789999999
Q ss_pred EcCCCCCCC-CCCHHHHHHHHHHHHHHHHHHHhhh
Q 018512 116 IPAGVPRKP-GMTRDDLFNINAGIVRTLCEGIAKC 149 (354)
Q Consensus 116 i~ag~~~~~-g~~r~d~~~~n~~~~~~i~~~i~~~ 149 (354)
++|+..... .....+++..|+....++.+.+++.
T Consensus 83 h~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~ 117 (322)
T PLN02986 83 HTASPVFFTVKDPQTELIDPALKGTINVLNTCKET 117 (322)
T ss_pred EeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhc
Confidence 999853211 1122345678999999999998875
No 108
>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase. All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.
Probab=97.88 E-value=0.0003 Score=70.15 Aligned_cols=119 Identities=24% Similarity=0.327 Sum_probs=72.9
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCC----------------CCCeEEEEeCCCcHHh
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD----------------TGAVVRGFLGQPQLEN 106 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~----------------~~~~v~~~~~~~d~~~ 106 (354)
|||+|||. |.+|..+|..|+..|+ +|+++|+++.. +.++.... ....++. ++++.+
T Consensus 1 mkI~vIGl-G~~G~~lA~~La~~G~--~V~~~d~~~~~--v~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~---~~~~~~ 72 (411)
T TIGR03026 1 MKIAVIGL-GYVGLPLAALLADLGH--EVTGVDIDQEK--VDKLNKGKSPIYEPGLDELLAKALAAGRLRA---TTDYED 72 (411)
T ss_pred CEEEEECC-CchhHHHHHHHHhcCC--eEEEEECCHHH--HHHhhcCCCCCCCCCHHHHHHHhhhcCCeEE---ECCHHH
Confidence 68999999 9999999999999998 89999997621 12222210 0011332 346677
Q ss_pred hhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEe-cCCCCCchHHHHHHHHH
Q 018512 107 ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLI-SNPVNSTVPIAAEVFKK 175 (354)
Q Consensus 107 al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~-tNPv~~~~~~~~~~~~~ 175 (354)
++++||+||++.+.|..... .-++..+...++.+.+.. ++.+|+.. |-|.+....+...++.+
T Consensus 73 ~~~~advvii~vpt~~~~~~------~~d~~~v~~~~~~i~~~l~~g~lvi~~STv~pgt~~~l~~~~~~~ 137 (411)
T TIGR03026 73 AIRDADVIIICVPTPLKEDG------SPDLSYVESAAETIAKHLRKGATVVLESTVPPGTTEEVVKPILER 137 (411)
T ss_pred HHhhCCEEEEEeCCCCCCCC------CcChHHHHHHHHHHHHhcCCCCEEEEeCcCCCCchHHHHHHHHHh
Confidence 89999999999877654321 112334444445555443 45555544 46666655544333333
No 109
>PRK15057 UDP-glucose 6-dehydrogenase; Provisional
Probab=97.87 E-value=0.00015 Score=71.78 Aligned_cols=114 Identities=18% Similarity=0.241 Sum_probs=67.1
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCC------------CCCeEEEEeCCCcHHhhhCC
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD------------TGAVVRGFLGQPQLENALTG 110 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~------------~~~~v~~~~~~~d~~~al~~ 110 (354)
|||+|||+ |.||..+|..++. |+ +|+.+|+++.+ +..+.... .....+. ..+.+..++.++
T Consensus 1 mkI~VIGl-GyvGl~~A~~lA~-G~--~VigvD~d~~k--v~~l~~g~~~~~e~~l~~~l~~~~~~l-~~t~~~~~~~~~ 73 (388)
T PRK15057 1 MKITISGT-GYVGLSNGLLIAQ-NH--EVVALDILPSR--VAMLNDRISPIVDKEIQQFLQSDKIHF-NATLDKNEAYRD 73 (388)
T ss_pred CEEEEECC-CHHHHHHHHHHHh-CC--cEEEEECCHHH--HHHHHcCCCCCCCcCHHHHHHhCCCcE-EEecchhhhhcC
Confidence 69999999 9999999977764 76 89999998621 11122110 0011121 123455678899
Q ss_pred CcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEE-ecCCCCCchHH
Q 018512 111 MDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNL-ISNPVNSTVPI 168 (354)
Q Consensus 111 aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv-~tNPv~~~~~~ 168 (354)
||+||++.+.|....... .++..+.+.++.+.+..++.+|++ .|-|.+..-.+
T Consensus 74 ad~vii~Vpt~~~~k~~~-----~dl~~v~~v~~~i~~~~~g~lVV~~STv~pgtt~~l 127 (388)
T PRK15057 74 ADYVIIATPTDYDPKTNY-----FNTSSVESVIKDVVEINPYAVMVIKSTVPVGFTAAM 127 (388)
T ss_pred CCEEEEeCCCCCccCCCC-----cChHHHHHHHHHHHhcCCCCEEEEeeecCCchHHHH
Confidence 999999977663221111 122344444455544345555444 36777766544
No 110
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=97.87 E-value=0.00012 Score=70.66 Aligned_cols=164 Identities=15% Similarity=0.042 Sum_probs=91.6
Q ss_pred CCCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc---hhHHHHHhc-C-CCCCeEEEE----eCCCcHHhhh
Q 018512 38 GGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISH-M-DTGAVVRGF----LGQPQLENAL 108 (354)
Q Consensus 38 ~~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~---~g~~~dl~~-~-~~~~~v~~~----~~~~d~~~al 108 (354)
|+.+.++|.|+||+|++|++++..|+..|. +|+++|++.. ......+.. . .....+..+ ....++.+++
T Consensus 2 ~~~~~~~vlVTGatGfiG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~ 79 (340)
T PLN02653 2 GDPPRKVALITGITGQDGSYLTEFLLSKGY--EVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWL 79 (340)
T ss_pred CCCCCCEEEEECCCCccHHHHHHHHHHCCC--EEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHH
Confidence 455668999999999999999999999887 8999987541 111111210 0 001112211 1112344556
Q ss_pred CC--CcEEEEcCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHhhhCCC----eEEEEec-CCCCCchHHHHHHHHHhCCC
Q 018512 109 TG--MDLVIIPAGVPRKPG--MTRDDLFNINAGIVRTLCEGIAKCCPN----ATVNLIS-NPVNSTVPIAAEVFKKAGTY 179 (354)
Q Consensus 109 ~~--aDvVIi~ag~~~~~g--~~r~d~~~~n~~~~~~i~~~i~~~~p~----a~viv~t-NPv~~~~~~~~~~~~~~~~~ 179 (354)
++ .|+||++|+...... ......+..|+....++++.+.++... ..++.+| .-+.-... ........+
T Consensus 80 ~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~---~~~~E~~~~ 156 (340)
T PLN02653 80 DDIKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTP---PPQSETTPF 156 (340)
T ss_pred HHcCCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCC---CCCCCCCCC
Confidence 54 599999998643211 122334567888999999999887743 2344443 11100000 000000112
Q ss_pred CCCCEEEeccchHHHHHHHHHHHhCCC
Q 018512 180 DPKKLLGVTMLDVVRANTFVAEVLGLD 206 (354)
Q Consensus 180 p~~kviG~t~ld~~r~~~~la~~l~v~ 206 (354)
.+...+|.+.....++...+++.+++.
T Consensus 157 ~p~~~Y~~sK~~~e~~~~~~~~~~~~~ 183 (340)
T PLN02653 157 HPRSPYAVAKVAAHWYTVNYREAYGLF 183 (340)
T ss_pred CCCChhHHHHHHHHHHHHHHHHHcCCe
Confidence 234556776655666666667777653
No 111
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=97.87 E-value=0.00012 Score=68.54 Aligned_cols=100 Identities=21% Similarity=0.252 Sum_probs=68.4
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCCCCCC
Q 018512 45 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKP 124 (354)
Q Consensus 45 I~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~~~~~ 124 (354)
|.|+||+|++|++++..|+..+. +|+.++++...... +.. ..+..... ....++++++|+||++++.+...
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~--~~~----~~~~~~~~-~~~~~~~~~~D~Vvh~a~~~~~~ 71 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGH--EVTILTRSPPAGAN--TKW----EGYKPWAP-LAESEALEGADAVINLAGEPIAD 71 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCC--EEEEEeCCCCCCCc--ccc----eeeecccc-cchhhhcCCCCEEEECCCCCccc
Confidence 57999999999999999999887 99999987621100 000 00111111 23357789999999999865432
Q ss_pred C-C---CHHHHHHHHHHHHHHHHHHHhhhCCCe
Q 018512 125 G-M---TRDDLFNINAGIVRTLCEGIAKCCPNA 153 (354)
Q Consensus 125 g-~---~r~d~~~~n~~~~~~i~~~i~~~~p~a 153 (354)
+ . ...++...|+...+++++.+++.....
T Consensus 72 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~ 104 (292)
T TIGR01777 72 KRWTEERKQEIRDSRIDTTRALVEAIAAAEQKP 104 (292)
T ss_pred ccCCHHHHHHHHhcccHHHHHHHHHHHhcCCCc
Confidence 2 1 224556779999999999999886533
No 112
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=97.87 E-value=0.00017 Score=67.69 Aligned_cols=166 Identities=15% Similarity=0.126 Sum_probs=105.3
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC-c--hhHHHHHhcCCCCCeEEE-EeCCCcHHhhhC--CCcEEEE
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-T--PGVTADISHMDTGAVVRG-FLGQPQLENALT--GMDLVII 116 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~-~--~g~~~dl~~~~~~~~v~~-~~~~~d~~~al~--~aDvVIi 116 (354)
|+|.|+||+||+|+++...++.+....+|+.+|.-. + .....++.+......+++ +.....+.+.++ ..|.|++
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vvh 80 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAVVH 80 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCeEEE
Confidence 689999999999999999888776656789999865 1 222334444322223333 211223345566 6999999
Q ss_pred cCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHhhhCCC-eEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEeccchHH
Q 018512 117 PAGVPRK--PGMTRDDLFNINAGIVRTLCEGIAKCCPN-ATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVV 193 (354)
Q Consensus 117 ~ag~~~~--~g~~r~d~~~~n~~~~~~i~~~i~~~~p~-a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~t~ld~~ 193 (354)
.|+-..- .=..-.+|++.|+-....+.+.++++... -++.+.|.-|.---..--..|-..+.+.|+-.+.-+.-.+.
T Consensus 81 fAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~~PsSPYSASKAasD 160 (340)
T COG1088 81 FAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPYNPSSPYSASKAASD 160 (340)
T ss_pred echhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCCCCCCCCcchhhhhHH
Confidence 8753321 11124678999999999999999999864 45566665553110000001224456777777776655555
Q ss_pred HHHHHHHHHhCCCCC
Q 018512 194 RANTFVAEVLGLDPR 208 (354)
Q Consensus 194 r~~~~la~~l~v~~~ 208 (354)
.+-+...+-+|++..
T Consensus 161 ~lVray~~TYglp~~ 175 (340)
T COG1088 161 LLVRAYVRTYGLPAT 175 (340)
T ss_pred HHHHHHHHHcCCceE
Confidence 677788888888643
No 113
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=97.85 E-value=4.5e-05 Score=59.79 Aligned_cols=94 Identities=20% Similarity=0.210 Sum_probs=59.5
Q ss_pred eEEEEcCCCchHHHHHHHHHhCC-CCcEEEEE-ecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCCC
Q 018512 44 KVAILGAAGGIGQPLAMLMKINP-LVSVLHLY-DVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP 121 (354)
Q Consensus 44 kI~IiGa~G~vG~~~a~~l~~~~-~~~ei~L~-D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~~ 121 (354)
||+|||+ |++|++++..|+..+ ...+|.++ ++++. ...++.... . +..+ +.+..+++++||+||++.-.
T Consensus 1 kI~iIG~-G~mg~al~~~l~~~g~~~~~v~~~~~r~~~--~~~~~~~~~-~--~~~~--~~~~~~~~~~advvilav~p- 71 (96)
T PF03807_consen 1 KIGIIGA-GNMGSALARGLLASGIKPHEVIIVSSRSPE--KAAELAKEY-G--VQAT--ADDNEEAAQEADVVILAVKP- 71 (96)
T ss_dssp EEEEEST-SHHHHHHHHHHHHTTS-GGEEEEEEESSHH--HHHHHHHHC-T--TEEE--SEEHHHHHHHTSEEEE-S-G-
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCCceeEEeeccCcHH--HHHHHHHhh-c--cccc--cCChHHhhccCCEEEEEECH-
Confidence 7999999 999999999999888 23488866 87652 112222211 1 1211 22457889999999998421
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCC
Q 018512 122 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP 161 (354)
Q Consensus 122 ~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNP 161 (354)
..+.++++.+....++..+|-++||
T Consensus 72 ---------------~~~~~v~~~i~~~~~~~~vis~~ag 96 (96)
T PF03807_consen 72 ---------------QQLPEVLSEIPHLLKGKLVISIAAG 96 (96)
T ss_dssp ---------------GGHHHHHHHHHHHHTTSEEEEESTT
T ss_pred ---------------HHHHHHHHHHhhccCCCEEEEeCCC
Confidence 1344566666444577777766665
No 114
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=97.85 E-value=0.00016 Score=64.89 Aligned_cols=97 Identities=21% Similarity=0.343 Sum_probs=63.9
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCCC
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP 121 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~~ 121 (354)
+|+++|+|+ |++|++++..+...++ ||..-..+..+......... .+.+.. ...++|.+.||+||.+. |
T Consensus 1 m~~~~i~Gt-GniG~alA~~~a~ag~--eV~igs~r~~~~~~a~a~~l--~~~i~~----~~~~dA~~~aDVVvLAV--P 69 (211)
T COG2085 1 MMIIAIIGT-GNIGSALALRLAKAGH--EVIIGSSRGPKALAAAAAAL--GPLITG----GSNEDAAALADVVVLAV--P 69 (211)
T ss_pred CcEEEEecc-ChHHHHHHHHHHhCCC--eEEEecCCChhHHHHHHHhh--cccccc----CChHHHHhcCCEEEEec--c
Confidence 578999998 9999999999999998 88888665522222211111 123333 23478999999999984 3
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCC
Q 018512 122 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN 163 (354)
Q Consensus 122 ~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~ 163 (354)
+. .+..+.+.++..-.+-+||=.|||.+
T Consensus 70 ----------~~----a~~~v~~~l~~~~~~KIvID~tnp~~ 97 (211)
T COG2085 70 ----------FE----AIPDVLAELRDALGGKIVIDATNPIE 97 (211)
T ss_pred ----------HH----HHHhHHHHHHHHhCCeEEEecCCCcc
Confidence 12 33344455554333677788899963
No 115
>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=97.82 E-value=4e-05 Score=71.29 Aligned_cols=115 Identities=17% Similarity=0.092 Sum_probs=73.4
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512 39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 118 (354)
Q Consensus 39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a 118 (354)
++.++||+|+||+|||||+++..|+..++ +|...|.... +....++|....+..+... +.-...-+..+|.|++.|
T Consensus 24 p~~~lrI~itGgaGFIgSHLvdkLm~egh--~VIa~Dn~ft-g~k~n~~~~~~~~~fel~~-hdv~~pl~~evD~IyhLA 99 (350)
T KOG1429|consen 24 PSQNLRILITGGAGFIGSHLVDKLMTEGH--EVIALDNYFT-GRKENLEHWIGHPNFELIR-HDVVEPLLKEVDQIYHLA 99 (350)
T ss_pred CCCCcEEEEecCcchHHHHHHHHHHhcCC--eEEEEecccc-cchhhcchhccCcceeEEE-eechhHHHHHhhhhhhhc
Confidence 55668999999999999999999999997 9999998652 2223344443333322211 222245689999999987
Q ss_pred CCCCCCC--CCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512 119 GVPRKPG--MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 159 (354)
Q Consensus 119 g~~~~~g--~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t 159 (354)
......+ ..-.+.+..|.-.........++.+ +.++.+|
T Consensus 100 apasp~~y~~npvktIktN~igtln~lglakrv~--aR~l~aS 140 (350)
T KOG1429|consen 100 APASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG--ARFLLAS 140 (350)
T ss_pred cCCCCcccccCccceeeecchhhHHHHHHHHHhC--ceEEEee
Confidence 6433222 2233445666666666666666554 5555554
No 116
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=97.80 E-value=8.3e-05 Score=70.71 Aligned_cols=99 Identities=17% Similarity=0.157 Sum_probs=65.3
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhC--CCcEEEEcCCC
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT--GMDLVIIPAGV 120 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~--~aDvVIi~ag~ 120 (354)
|||.|+||+|++|++++..|+..+ +|+.+|+.... ...|+. ....+.++++ ++|+||++|+.
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g---~V~~~~~~~~~-~~~Dl~------------d~~~~~~~~~~~~~D~Vih~Aa~ 64 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG---NLIALDVHSTD-YCGDFS------------NPEGVAETVRKIRPDVIVNAAAH 64 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC---CEEEecccccc-ccCCCC------------CHHHHHHHHHhcCCCEEEECCcc
Confidence 689999999999999999998777 47778864310 000111 1123445565 58999999876
Q ss_pred CCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512 121 PRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 159 (354)
Q Consensus 121 ~~~~--g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t 159 (354)
.... ..........|+....++++.+++.+. .++.+|
T Consensus 65 ~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g~--~~v~~S 103 (299)
T PRK09987 65 TAVDKAESEPEFAQLLNATSVEAIAKAANEVGA--WVVHYS 103 (299)
T ss_pred CCcchhhcCHHHHHHHHHHHHHHHHHHHHHcCC--eEEEEc
Confidence 4321 112233456899999999999998753 444443
No 117
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=97.77 E-value=0.00042 Score=65.71 Aligned_cols=102 Identities=21% Similarity=0.215 Sum_probs=62.9
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCC---CCeEEE-EeCCCcHHhhhCCCcEEEEcC
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT---GAVVRG-FLGQPQLENALTGMDLVIIPA 118 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~---~~~v~~-~~~~~d~~~al~~aDvVIi~a 118 (354)
|||+|+|+ |.+|+.++..|...|+ +|.++|++...- ..+..... ...... .....+..+ .+++|+||++.
T Consensus 1 m~I~IiG~-G~~G~~~a~~L~~~g~--~V~~~~r~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~d~vila~ 74 (304)
T PRK06522 1 MKIAILGA-GAIGGLFGAALAQAGH--DVTLVARRGAHL--DALNENGLRLEDGEITVPVLAADDPAE-LGPQDLVILAV 74 (304)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC--eEEEEECChHHH--HHHHHcCCcccCCceeecccCCCChhH-cCCCCEEEEec
Confidence 68999999 9999999999998887 899999864211 11111110 011110 111234444 49999999985
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhh-CCCeEEEEecCCCCCch
Q 018512 119 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKC-CPNATVNLISNPVNSTV 166 (354)
Q Consensus 119 g~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~-~p~a~viv~tNPv~~~~ 166 (354)
... .+.++++.+..+ .++..|+...|.++...
T Consensus 75 k~~----------------~~~~~~~~l~~~l~~~~~iv~~~nG~~~~~ 107 (304)
T PRK06522 75 KAY----------------QLPAALPSLAPLLGPDTPVLFLQNGVGHLE 107 (304)
T ss_pred ccc----------------cHHHHHHHHhhhcCCCCEEEEecCCCCcHH
Confidence 321 123444444443 35678888899887654
No 118
>PRK07201 short chain dehydrogenase; Provisional
Probab=97.74 E-value=0.00054 Score=72.04 Aligned_cols=115 Identities=14% Similarity=0.104 Sum_probs=71.4
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCC----------CcHHhhhCCCc
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQ----------PQLENALTGMD 112 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~----------~d~~~al~~aD 112 (354)
|||.|+||+|++|++++..|+......+|++++++.......++........++.+... .++ +.++++|
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~-~~l~~~D 79 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADI-AELGDID 79 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHH-HHhcCCC
Confidence 68999999999999999999852222389999986522222222110000112221110 122 2348999
Q ss_pred EEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512 113 LVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 159 (354)
Q Consensus 113 vVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t 159 (354)
+||++|+.... .....+....|+....++++.+.+...+.+|.+.|
T Consensus 80 ~Vih~Aa~~~~-~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS 125 (657)
T PRK07201 80 HVVHLAAIYDL-TADEEAQRAANVDGTRNVVELAERLQAATFHHVSS 125 (657)
T ss_pred EEEECceeecC-CCCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEec
Confidence 99999885432 23345567889999999999998875555554443
No 119
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated
Probab=97.73 E-value=0.00025 Score=67.94 Aligned_cols=100 Identities=22% Similarity=0.342 Sum_probs=63.6
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCch--hHHHHHhcCC------CCCeEEEEeCCCcHHhhhCCCcE
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMD------TGAVVRGFLGQPQLENALTGMDL 113 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~--g~~~dl~~~~------~~~~v~~~~~~~d~~~al~~aDv 113 (354)
+|||+|||+ |.+|+.++..|...++ +|.++|+++.. ....+..+.. ....+.. +.+..++++++|+
T Consensus 1 mmkI~iiG~-G~mG~~~a~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~D~ 74 (325)
T PRK00094 1 MMKIAVLGA-GSWGTALAIVLARNGH--DVTLWARDPEQAAEINADRENPRYLPGIKLPDNLRA---TTDLAEALADADL 74 (325)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC--EEEEEECCHHHHHHHHHcCcccccCCCCcCCCCeEE---eCCHHHHHhCCCE
Confidence 479999999 9999999999999888 89999997521 1111100100 0011222 2456678899999
Q ss_pred EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCC
Q 018512 114 VIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVN 163 (354)
Q Consensus 114 VIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~ 163 (354)
||++... ..+.++++.+..+. ++.+++..+|-++
T Consensus 75 vi~~v~~----------------~~~~~v~~~l~~~~~~~~~vi~~~ngv~ 109 (325)
T PRK00094 75 ILVAVPS----------------QALREVLKQLKPLLPPDAPIVWATKGIE 109 (325)
T ss_pred EEEeCCH----------------HHHHHHHHHHHhhcCCCCEEEEEeeccc
Confidence 9998421 12344445555553 5777777776554
No 120
>PRK12921 2-dehydropantoate 2-reductase; Provisional
Probab=97.71 E-value=0.00067 Score=64.44 Aligned_cols=119 Identities=12% Similarity=0.136 Sum_probs=71.3
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCC-----CCeEEE-EeCCCcHHhhhCCCcEEEE
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT-----GAVVRG-FLGQPQLENALTGMDLVII 116 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~-----~~~v~~-~~~~~d~~~al~~aDvVIi 116 (354)
|||+|+|+ |.+|..++..|...|+ +|.++++ +.. ...+.+... ...... ....++..++.+++|+||+
T Consensus 1 mkI~IiG~-G~iG~~~a~~L~~~g~--~V~~~~r-~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vil 74 (305)
T PRK12921 1 MRIAVVGA-GAVGGTFGGRLLEAGR--DVTFLVR-PKR--AKALRERGLVIRSDHGDAVVPGPVITDPEELTGPFDLVIL 74 (305)
T ss_pred CeEEEECC-CHHHHHHHHHHHHCCC--ceEEEec-HHH--HHHHHhCCeEEEeCCCeEEecceeecCHHHccCCCCEEEE
Confidence 69999999 9999999999999887 8999998 411 111221110 001100 0012344555689999999
Q ss_pred cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhh-CCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEE-eccc
Q 018512 117 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKC-CPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLG-VTML 190 (354)
Q Consensus 117 ~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~-~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG-~t~l 190 (354)
+.... .+.++++.+..+ .++..|+...|.++.... +.+. +|..++++ ++..
T Consensus 75 avk~~----------------~~~~~~~~l~~~~~~~~~ii~~~nG~~~~~~-----l~~~--~~~~~v~~g~~~~ 127 (305)
T PRK12921 75 AVKAY----------------QLDAAIPDLKPLVGEDTVIIPLQNGIGQLEQ-----LEPY--FGRERVLGGVVFI 127 (305)
T ss_pred Eeccc----------------CHHHHHHHHHhhcCCCCEEEEeeCCCChHHH-----HHHh--CCcccEEEEEEEE
Confidence 85322 123444455543 356777778898875432 2332 56667764 4443
No 121
>PLN02253 xanthoxin dehydrogenase
Probab=97.71 E-value=0.00078 Score=62.94 Aligned_cols=147 Identities=17% Similarity=0.197 Sum_probs=82.2
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEE----eCCCcHHhhhC-----
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGF----LGQPQLENALT----- 109 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~----~~~~d~~~al~----- 109 (354)
..+++.|+||+|.+|.+++..|+..|. +|+++|++.. .....++.. ...+..+ ....+.+++++
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~--~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~~~~ 91 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGA--KVCIVDLQDDLGQNVCDSLGG---EPNVCFFHCDVTVEDDVSRAVDFTVDK 91 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHhcC---CCceEEEEeecCCHHHHHHHHHHHHHH
Confidence 345899999999999999999999887 8999998652 222222321 1112211 11112233333
Q ss_pred --CCcEEEEcCCCCCCC-C----CCH---HHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecCCCCCchHHHHHHHHHh
Q 018512 110 --GMDLVIIPAGVPRKP-G----MTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISNPVNSTVPIAAEVFKKA 176 (354)
Q Consensus 110 --~aDvVIi~ag~~~~~-g----~~r---~d~~~~n~~~~~~i~~~i~~~---~p~a~viv~tNPv~~~~~~~~~~~~~~ 176 (354)
..|+||+.||..... + .+. ...+..|+.....+.+.+.+. ...+.+++++......
T Consensus 92 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~----------- 160 (280)
T PLN02253 92 FGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAI----------- 160 (280)
T ss_pred hCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcc-----------
Confidence 689999999864321 1 122 234566655554444443322 1345666665422111
Q ss_pred CCCCCCCEEEeccchHHHHHHHHHHHhC
Q 018512 177 GTYDPKKLLGVTMLDVVRANTFVAEVLG 204 (354)
Q Consensus 177 ~~~p~~kviG~t~ld~~r~~~~la~~l~ 204 (354)
+.+..-.+|.+......+.+.++..++
T Consensus 161 -~~~~~~~Y~~sK~a~~~~~~~la~e~~ 187 (280)
T PLN02253 161 -GGLGPHAYTGSKHAVLGLTRSVAAELG 187 (280)
T ss_pred -cCCCCcccHHHHHHHHHHHHHHHHHhh
Confidence 222233566665555567777887775
No 122
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=97.69 E-value=0.00027 Score=67.68 Aligned_cols=79 Identities=23% Similarity=0.300 Sum_probs=59.4
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCCC
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP 121 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~~ 121 (354)
.|||+|||+ |.+|++++..|...|+ +|.++|+++. .++.+++++||+||++...
T Consensus 4 ~m~I~iiG~-G~~G~~lA~~l~~~G~--~V~~~~r~~~----------------------~~~~~~~~~advvi~~vp~- 57 (308)
T PRK14619 4 PKTIAILGA-GAWGSTLAGLASANGH--RVRVWSRRSG----------------------LSLAAVLADADVIVSAVSM- 57 (308)
T ss_pred CCEEEEECc-cHHHHHHHHHHHHCCC--EEEEEeCCCC----------------------CCHHHHHhcCCEEEEECCh-
Confidence 579999999 9999999999999998 9999998641 2356778999999998420
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhhh--CCCeEEEEecCC
Q 018512 122 RKPGMTRDDLFNINAGIVRTLCEGIAKC--CPNATVNLISNP 161 (354)
Q Consensus 122 ~~~g~~r~d~~~~n~~~~~~i~~~i~~~--~p~a~viv~tNP 161 (354)
..++++++.+..+ .++.+|+..|+.
T Consensus 58 ---------------~~~~~v~~~l~~~~~~~~~ivi~~s~g 84 (308)
T PRK14619 58 ---------------KGVRPVAEQVQALNLPPETIIVTATKG 84 (308)
T ss_pred ---------------HHHHHHHHHHHHhcCCCCcEEEEeCCc
Confidence 2344555666543 467777777763
No 123
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=97.68 E-value=0.00042 Score=65.79 Aligned_cols=160 Identities=9% Similarity=0.117 Sum_probs=86.7
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCc-HHhhh-----CCCcEEEEcC
Q 018512 45 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ-LENAL-----TGMDLVIIPA 118 (354)
Q Consensus 45 I~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d-~~~al-----~~aDvVIi~a 118 (354)
|.|+||+|++|++++..|+..|. ..+.++|..........+.+.. +.......+ +++++ .++|+||++|
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~-~~v~~~~~~~~~~~~~~~~~~~----~~d~~~~~~~~~~~~~~~~~~~~d~Vih~A 76 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGI-TDILVVDNLKDGTKFVNLVDLD----IADYMDKEDFLAQIMAGDDFGDIEAIFHEG 76 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCC-ceEEEecCCCcchHHHhhhhhh----hhhhhhHHHHHHHHhcccccCCccEEEECc
Confidence 78999999999999999998885 2467778754211101111111 000000011 12222 3799999998
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCC------CCCchHHHHHHHHHhCCCCCCCEEEeccchH
Q 018512 119 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP------VNSTVPIAAEVFKKAGTYDPKKLLGVTMLDV 192 (354)
Q Consensus 119 g~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNP------v~~~~~~~~~~~~~~~~~p~~kviG~t~ld~ 192 (354)
+.+.............|+....++.+.+++.+. .+|..|.. .+... .......+...+|.+....
T Consensus 77 ~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~--~~i~~SS~~vyg~~~~~~~-------~E~~~~~p~~~Y~~sK~~~ 147 (308)
T PRK11150 77 ACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI--PFLYASSAATYGGRTDDFI-------EEREYEKPLNVYGYSKFLF 147 (308)
T ss_pred eecCCcCCChHHHHHHHHHHHHHHHHHHHHcCC--cEEEEcchHHhCcCCCCCC-------ccCCCCCCCCHHHHHHHHH
Confidence 754332333445678899999999999988754 34444321 11000 0101112223455554444
Q ss_pred HHHHHHHHHHhCCCCCCCc-ceEEeec
Q 018512 193 VRANTFVAEVLGLDPRDVD-VPVVGGH 218 (354)
Q Consensus 193 ~r~~~~la~~l~v~~~~v~-~~v~G~h 218 (354)
.++...+++..+++...++ ..++|..
T Consensus 148 E~~~~~~~~~~~~~~~~lR~~~vyG~~ 174 (308)
T PRK11150 148 DEYVRQILPEANSQICGFRYFNVYGPR 174 (308)
T ss_pred HHHHHHHHHHcCCCEEEEeeeeecCCC
Confidence 4444444444565544444 5677754
No 124
>PLN02240 UDP-glucose 4-epimerase
Probab=97.67 E-value=0.00059 Score=65.88 Aligned_cols=113 Identities=19% Similarity=0.151 Sum_probs=70.7
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCC--CCCeEEEE----eCCCcHHhhhC--CC
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMD--TGAVVRGF----LGQPQLENALT--GM 111 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~--~~~~v~~~----~~~~d~~~al~--~a 111 (354)
.+||+|+||+|++|++++..|+..+. +|+++|+... ......+.+.. ....++.+ ....++.++++ ++
T Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~ 82 (352)
T PLN02240 5 GRTILVTGGAGYIGSHTVLQLLLAGY--KVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTRF 82 (352)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCCC
Confidence 36899999999999999999998887 8999986431 11111111110 01112211 11123334444 68
Q ss_pred cEEEEcCCCCCCC-C-CCHHHHHHHHHHHHHHHHHHHhhhCCCeEEE
Q 018512 112 DLVIIPAGVPRKP-G-MTRDDLFNINAGIVRTLCEGIAKCCPNATVN 156 (354)
Q Consensus 112 DvVIi~ag~~~~~-g-~~r~d~~~~n~~~~~~i~~~i~~~~p~a~vi 156 (354)
|+||++|+..... . ....+.+..|+.....+++.+++...+.+|.
T Consensus 83 d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~ 129 (352)
T PLN02240 83 DAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVF 129 (352)
T ss_pred CEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 9999998864221 1 2345677899999999999988765444443
No 125
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=97.66 E-value=0.00077 Score=61.99 Aligned_cols=114 Identities=16% Similarity=0.239 Sum_probs=67.8
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh-------
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL------- 108 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al------- 108 (354)
.+++.|+||+|.+|++++..|+..|. +|+++++++ ......++.+.. ..+..+. +-+| +++++
T Consensus 7 ~~~vlItGasg~iG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 82 (262)
T PRK13394 7 GKTAVVTGAASGIGKEIALELARAGA--AVAIADLNQDGANAVADEINKAG--GKAIGVAMDVTNEDAVNAGIDKVAERF 82 (262)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHhcC--ceEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 45899999999999999999999988 899999876 222333343322 2222211 1122 22222
Q ss_pred CCCcEEEEcCCCCCCC---C---CCHHHHHHHHHHH----HHHHHHHHhhhCCCeEEEEec
Q 018512 109 TGMDLVIIPAGVPRKP---G---MTRDDLFNINAGI----VRTLCEGIAKCCPNATVNLIS 159 (354)
Q Consensus 109 ~~aDvVIi~ag~~~~~---g---~~r~d~~~~n~~~----~~~i~~~i~~~~p~a~viv~t 159 (354)
...|+||+++|..... . ....+.+..|+.. .+.+.+.+.+..+.+.|+++|
T Consensus 83 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~s 143 (262)
T PRK13394 83 GSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMG 143 (262)
T ss_pred CCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEc
Confidence 3489999999864211 1 1123344566665 666666663334445555554
No 126
>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]
Probab=97.65 E-value=0.00031 Score=68.34 Aligned_cols=114 Identities=20% Similarity=0.233 Sum_probs=76.1
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc-hhHHHHHhcCCCCCeEEEE----eCCCcHHhhhCCCcEE
Q 018512 40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGF----LGQPQLENALTGMDLV 114 (354)
Q Consensus 40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~-~g~~~dl~~~~~~~~v~~~----~~~~d~~~al~~aDvV 114 (354)
.++.++.|+||+|++|.+++..|..++...+|.++|.... ...-.+..... ...++.. .+..+...|++++ .|
T Consensus 2 ~~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~-~~~v~~~~~D~~~~~~i~~a~~~~-~V 79 (361)
T KOG1430|consen 2 EKKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFR-SGRVTVILGDLLDANSISNAFQGA-VV 79 (361)
T ss_pred CcCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhccc-CCceeEEecchhhhhhhhhhccCc-eE
Confidence 3456899999999999999999999986669999999762 11111222111 1222221 1224567899999 77
Q ss_pred EEcCCCC-CCCCC-CHHHHHHHHHHHHHHHHHHHhhhCCCeEE
Q 018512 115 IIPAGVP-RKPGM-TRDDLFNINAGIVRTLCEGIAKCCPNATV 155 (354)
Q Consensus 115 Ii~ag~~-~~~g~-~r~d~~~~n~~~~~~i~~~i~~~~p~a~v 155 (354)
+++|..+ ..... .+.....-|+...+++.+.+.+.+-+..|
T Consensus 80 vh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lI 122 (361)
T KOG1430|consen 80 VHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLI 122 (361)
T ss_pred EEeccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEE
Confidence 7755433 22223 35666678999999999999998766533
No 127
>PTZ00345 glycerol-3-phosphate dehydrogenase; Provisional
Probab=97.65 E-value=0.00044 Score=67.78 Aligned_cols=106 Identities=15% Similarity=0.297 Sum_probs=68.5
Q ss_pred hhhhhhcccCCCCCCCeEEEEcCCCchHHHHHHHHHhCCC-----CcEEEEEecCCc---hhHHHHHhcC--C--C----
Q 018512 28 CLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPL-----VSVLHLYDVVNT---PGVTADISHM--D--T---- 91 (354)
Q Consensus 28 ~~~~~~~~~~~~~~~~kI~IiGa~G~vG~~~a~~l~~~~~-----~~ei~L~D~~~~---~g~~~dl~~~--~--~---- 91 (354)
+|.++.++. +||+|||+ |.-|+++|..|..++. ..+|.|+.+++. +..+.++++. . .
T Consensus 3 ~~~~~~~~~------~ki~ViGa-G~wGtAlA~~l~~n~~~~~~~~~~V~lw~~~~~~~~~~~~~~in~~~~N~~ylp~~ 75 (365)
T PTZ00345 3 LFQKLRCGP------LKVSVIGS-GNWGSAISKVVGENTQRNYIFHNEVRMWVLEEIVEGEKLSDIINTKHENVKYLPGI 75 (365)
T ss_pred chhhcccCC------CeEEEECC-CHHHHHHHHHHHhcCCcccCCCCeEEEEEecccccchHHHHHHHhcCCCcccCCCC
Confidence 455555444 59999999 9999999999998762 238899988762 1234444422 1 1
Q ss_pred --CCeEEEEeCCCcHHhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhh--hC-CCeEEEEec
Q 018512 92 --GAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAK--CC-PNATVNLIS 159 (354)
Q Consensus 92 --~~~v~~~~~~~d~~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~--~~-p~a~viv~t 159 (354)
...+.. ++|+.+++++||+||++. | ...+++++++++. +- ++.++|.++
T Consensus 76 ~Lp~ni~~---tsdl~eav~~aDiIvlAV--P--------------sq~l~~vl~~l~~~~~l~~~~~iIS~a 129 (365)
T PTZ00345 76 KLPDNIVA---VSDLKEAVEDADLLIFVI--P--------------HQFLESVLSQIKENNNLKKHARAISLT 129 (365)
T ss_pred cCCCceEE---ecCHHHHHhcCCEEEEEc--C--------------hHHHHHHHHHhccccccCCCCEEEEEe
Confidence 122333 457788999999999973 2 1356677777775 33 344555554
No 128
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=97.65 E-value=0.0003 Score=65.92 Aligned_cols=89 Identities=22% Similarity=0.312 Sum_probs=64.7
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCC--cEEEEcCCCC
Q 018512 44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGM--DLVIIPAGVP 121 (354)
Q Consensus 44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~a--DvVIi~ag~~ 121 (354)
||.|+||+|++|++++..|+..|. +|+++++.. .|+.+ ..++.++++++ |+||++++..
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~--~v~~~~r~~-----~d~~~------------~~~~~~~~~~~~~d~vi~~a~~~ 61 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGR--VVVALTSSQ-----LDLTD------------PEALERLLRAIRPDAVVNTAAYT 61 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCC--EEEEeCCcc-----cCCCC------------HHHHHHHHHhCCCCEEEECCccc
Confidence 689999999999999999998887 899988741 11211 12345667665 9999998864
Q ss_pred CCCC--CCHHHHHHHHHHHHHHHHHHHhhhCC
Q 018512 122 RKPG--MTRDDLFNINAGIVRTLCEGIAKCCP 151 (354)
Q Consensus 122 ~~~g--~~r~d~~~~n~~~~~~i~~~i~~~~p 151 (354)
.... .........|+....++++.+.+...
T Consensus 62 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 93 (287)
T TIGR01214 62 DVDGAESDPEKAFAVNALAPQNLARAAARHGA 93 (287)
T ss_pred cccccccCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 3221 23445677899999999999887653
No 129
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=97.64 E-value=0.00062 Score=67.41 Aligned_cols=114 Identities=18% Similarity=0.133 Sum_probs=70.5
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCch--h--HHHHHhcCCCCCe-EEE-EeCCCcHHhhhC----C
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--G--VTADISHMDTGAV-VRG-FLGQPQLENALT----G 110 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~--g--~~~dl~~~~~~~~-v~~-~~~~~d~~~al~----~ 110 (354)
..+||.|+||+|++|+.++..|+.+|. +|++++++... . ...++........ +.. .....++.++++ +
T Consensus 59 ~~~kVLVtGatG~IG~~l~~~Ll~~G~--~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~ 136 (390)
T PLN02657 59 KDVTVLVVGATGYIGKFVVRELVRRGY--NVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDP 136 (390)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCC
Confidence 357999999999999999999999887 89999986521 0 1111111110111 111 111233455666 5
Q ss_pred CcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512 111 MDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 159 (354)
Q Consensus 111 aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t 159 (354)
+|+||++++.+... ..+.+..|.....++++.+++.+.+-+|++.|
T Consensus 137 ~D~Vi~~aa~~~~~---~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS 182 (390)
T PLN02657 137 VDVVVSCLASRTGG---VKDSWKIDYQATKNSLDAGREVGAKHFVLLSA 182 (390)
T ss_pred CcEEEECCccCCCC---CccchhhHHHHHHHHHHHHHHcCCCEEEEEee
Confidence 99999987643211 12335667888888999888776554544443
No 130
>PRK08229 2-dehydropantoate 2-reductase; Provisional
Probab=97.64 E-value=0.00052 Score=66.39 Aligned_cols=101 Identities=21% Similarity=0.216 Sum_probs=62.6
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCC------CCeE----EEEeCCCcHHhhhCCC
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT------GAVV----RGFLGQPQLENALTGM 111 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~------~~~v----~~~~~~~d~~~al~~a 111 (354)
+|||+|||+ |.+|+.++..|...|+ +|.++|+++.. ..+..... .... ..+..+++. ++++++
T Consensus 2 ~mkI~IiG~-G~mG~~~A~~L~~~G~--~V~~~~r~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 74 (341)
T PRK08229 2 MARICVLGA-GSIGCYLGGRLAAAGA--DVTLIGRARIG---DELRAHGLTLTDYRGRDVRVPPSAIAFSTDP-AALATA 74 (341)
T ss_pred CceEEEECC-CHHHHHHHHHHHhcCC--cEEEEecHHHH---HHHHhcCceeecCCCcceecccceeEeccCh-hhccCC
Confidence 479999999 9999999999999987 89999985411 11111110 0000 001113454 678999
Q ss_pred cEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhh-CCCeEEEEecCCCCCc
Q 018512 112 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKC-CPNATVNLISNPVNST 165 (354)
Q Consensus 112 DvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~-~p~a~viv~tNPv~~~ 165 (354)
|+||++...+. ..++++.+... .++.+|+..+|..+..
T Consensus 75 D~vil~vk~~~----------------~~~~~~~l~~~~~~~~iii~~~nG~~~~ 113 (341)
T PRK08229 75 DLVLVTVKSAA----------------TADAAAALAGHARPGAVVVSFQNGVRNA 113 (341)
T ss_pred CEEEEEecCcc----------------hHHHHHHHHhhCCCCCEEEEeCCCCCcH
Confidence 99999853221 12333444444 3567777778877654
No 131
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=97.64 E-value=0.00035 Score=60.55 Aligned_cols=64 Identities=17% Similarity=0.247 Sum_probs=46.4
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEc
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP 117 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ 117 (354)
++||.+||. |.+|+.++..|+..++ +|+.||+++ ....++.+.. .+.. .++.+++++||+||.+
T Consensus 1 m~~Ig~IGl-G~mG~~~a~~L~~~g~--~v~~~d~~~--~~~~~~~~~g----~~~~---~s~~e~~~~~dvvi~~ 64 (163)
T PF03446_consen 1 MMKIGFIGL-GNMGSAMARNLAKAGY--EVTVYDRSP--EKAEALAEAG----AEVA---DSPAEAAEQADVVILC 64 (163)
T ss_dssp -BEEEEE---SHHHHHHHHHHHHTTT--EEEEEESSH--HHHHHHHHTT----EEEE---SSHHHHHHHBSEEEE-
T ss_pred CCEEEEEch-HHHHHHHHHHHHhcCC--eEEeeccch--hhhhhhHHhh----hhhh---hhhhhHhhcccceEee
Confidence 479999999 9999999999999998 999999865 2223344332 3322 3568899999999997
No 132
>PRK05865 hypothetical protein; Provisional
Probab=97.62 E-value=0.00043 Score=74.57 Aligned_cols=104 Identities=17% Similarity=0.164 Sum_probs=71.8
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEE-EeCCCcHHhhhCCCcEEEEcCCCC
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENALTGMDLVIIPAGVP 121 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~~~d~~~al~~aDvVIi~ag~~ 121 (354)
|||.|+||+|++|++++..|+..|+ +|+++|++.... +. .. ...+.. +....++.++++++|+||++|+..
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G~--~Vv~l~R~~~~~----~~-~~-v~~v~gDL~D~~~l~~al~~vD~VVHlAa~~ 72 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQGH--EVVGIARHRPDS----WP-SS-ADFIAADIRDATAVESAMTGADVVAHCAWVR 72 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcC--EEEEEECCchhh----cc-cC-ceEEEeeCCCHHHHHHHHhCCCEEEECCCcc
Confidence 6899999999999999999999888 899999864210 11 01 011221 112234567789999999998653
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCC
Q 018512 122 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV 162 (354)
Q Consensus 122 ~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv 162 (354)
.. ....|+....++++.+++.+.. .++++|.+.
T Consensus 73 ~~-------~~~vNv~GT~nLLeAa~~~gvk-r~V~iSS~~ 105 (854)
T PRK05865 73 GR-------NDHINIDGTANVLKAMAETGTG-RIVFTSSGH 105 (854)
T ss_pred cc-------hHHHHHHHHHHHHHHHHHcCCC-eEEEECCcH
Confidence 21 3467888999999999877644 455566553
No 133
>PRK08643 acetoin reductase; Validated
Probab=97.61 E-value=0.0029 Score=58.17 Aligned_cols=114 Identities=20% Similarity=0.262 Sum_probs=65.2
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEe-CCCc---HHhh-------hC
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENA-------LT 109 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~-~~~d---~~~a-------l~ 109 (354)
+++.|+||+|.+|..++..|+..|. +|+++|++.. .....++.+.. ..+..+. +-++ +.++ +.
T Consensus 3 k~~lItGas~giG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 78 (256)
T PRK08643 3 KVALVTGAGQGIGFAIAKRLVEDGF--KVAIVDYNEETAQAAADKLSKDG--GKAIAVKADVSDRDQVFAAVRQVVDTFG 78 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4789999999999999999999887 8999998752 22223343321 1111111 1112 1222 24
Q ss_pred CCcEEEEcCCCCCC-C--CCCH---HHHHHHHHHHH----HHHHHHHhhhCCCeEEEEecC
Q 018512 110 GMDLVIIPAGVPRK-P--GMTR---DDLFNINAGIV----RTLCEGIAKCCPNATVNLISN 160 (354)
Q Consensus 110 ~aDvVIi~ag~~~~-~--g~~r---~d~~~~n~~~~----~~i~~~i~~~~p~a~viv~tN 160 (354)
+.|+||+++|.... + ..+. ...+..|+... +.+.+.+++..+++.|+++|.
T Consensus 79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS 139 (256)
T PRK08643 79 DLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATS 139 (256)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECc
Confidence 68999999986422 1 1111 22345565543 344444444444566776664
No 134
>PLN02686 cinnamoyl-CoA reductase
Probab=97.61 E-value=0.00037 Score=68.39 Aligned_cols=178 Identities=14% Similarity=0.076 Sum_probs=96.9
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCch-hHHHHHhcC---C-CCCeEEEE----eCCCcHHhhhC
Q 018512 39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHM---D-TGAVVRGF----LGQPQLENALT 109 (354)
Q Consensus 39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~-g~~~dl~~~---~-~~~~v~~~----~~~~d~~~al~ 109 (354)
...+++|+|+||+|++|++++..|+..|+ +|+++..+... ....++... . ....+..+ ....++.++++
T Consensus 50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~--~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~ 127 (367)
T PLN02686 50 DAEARLVCVTGGVSFLGLAIVDRLLRHGY--SVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD 127 (367)
T ss_pred CCCCCEEEEECCchHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHH
Confidence 45567999999999999999999999987 88776554311 111122110 0 00112221 11223567789
Q ss_pred CCcEEEEcCCCCCCCCC--CHHHHHHHHHHHHHHHHHHHhhh-CCCeEEEEecC--CCCCc------hHHHHHHHH--Hh
Q 018512 110 GMDLVIIPAGVPRKPGM--TRDDLFNINAGIVRTLCEGIAKC-CPNATVNLISN--PVNST------VPIAAEVFK--KA 176 (354)
Q Consensus 110 ~aDvVIi~ag~~~~~g~--~r~d~~~~n~~~~~~i~~~i~~~-~p~a~viv~tN--Pv~~~------~~~~~~~~~--~~ 176 (354)
++|.||++++.....+. ...++...|+....++++.+++. +.+-+|+..|. .+... .....+-.+ ..
T Consensus 128 ~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~ 207 (367)
T PLN02686 128 GCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDES 207 (367)
T ss_pred hccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCChh
Confidence 99999998875432221 12344567899999999998875 34444444442 11000 000000000 00
Q ss_pred CCCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCc-ceEEeec
Q 018512 177 GTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGH 218 (354)
Q Consensus 177 ~~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~-~~v~G~h 218 (354)
.-.++.-.+|.+.+...++-..+++..|++..-++ +.++|..
T Consensus 208 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~ 250 (367)
T PLN02686 208 FCRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPG 250 (367)
T ss_pred hcccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCC
Confidence 00011123455555555665666676677665554 5688864
No 135
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=97.59 E-value=0.00015 Score=65.47 Aligned_cols=167 Identities=19% Similarity=0.171 Sum_probs=94.3
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC-chhHHHHHhcCCCCCeEEE-EeCCCcHHhhhCCC--cEEEEcCCC
Q 018512 45 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRG-FLGQPQLENALTGM--DLVIIPAGV 120 (354)
Q Consensus 45 I~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~-~~g~~~dl~~~~~~~~v~~-~~~~~d~~~al~~a--DvVIi~ag~ 120 (354)
|+|+||+|++|+.++..|+.++. +++.+.... ............ .+.. .....++.+++++. |.||++|+.
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~---~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~ 75 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGH--EVIVLSRSSNSESFEEKKLNVE---FVIGDLTDKEQLEKLLEKANIDVVIHLAAF 75 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTT--EEEEEESCSTGGHHHHHHTTEE---EEESETTSHHHHHHHHHHHTESEEEEEBSS
T ss_pred EEEEccCCHHHHHHHHHHHHcCC--ccccccccccccccccccceEE---EEEeeccccccccccccccCceEEEEeecc
Confidence 78999999999999999999998 666555544 222222111100 0110 11123455667777 999999886
Q ss_pred CC--CCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEeccchHHHHHHH
Q 018512 121 PR--KPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTF 198 (354)
Q Consensus 121 ~~--~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~t~ld~~r~~~~ 198 (354)
.. .......+....|+...+++.+.+++.....++...|--+..... ...+.....+.+...+|.+.....++...
T Consensus 76 ~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~~--~~~~~e~~~~~~~~~Y~~~K~~~e~~~~~ 153 (236)
T PF01370_consen 76 SSNPESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDPD--GEPIDEDSPINPLSPYGASKRAAEELLRD 153 (236)
T ss_dssp SSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSSS--SSSBETTSGCCHSSHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccccccc
Confidence 53 111345677889999999999999999874444443311100000 00000000011122344444445556666
Q ss_pred HHHHhCCCCCCCc-ceEEeec
Q 018512 199 VAEVLGLDPRDVD-VPVVGGH 218 (354)
Q Consensus 199 la~~l~v~~~~v~-~~v~G~h 218 (354)
+++..+++...++ ..++|.+
T Consensus 154 ~~~~~~~~~~~~R~~~vyG~~ 174 (236)
T PF01370_consen 154 YAKKYGLRVTILRPPNVYGPG 174 (236)
T ss_dssp HHHHHTSEEEEEEESEEESTT
T ss_pred ccccccccccccccccccccc
Confidence 6666677766664 4567765
No 136
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=97.59 E-value=0.00051 Score=65.03 Aligned_cols=109 Identities=11% Similarity=0.119 Sum_probs=66.9
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhh----hCCCcEEEEcCCC
Q 018512 45 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENA----LTGMDLVIIPAGV 120 (354)
Q Consensus 45 I~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~a----l~~aDvVIi~ag~ 120 (354)
|.|+||+|++|++++..|...+.. +|+++|..........+........+. ....++.. +.++|+||++|+.
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~-~v~~~~~~~~~~~~~~~~~~~~~~d~~---~~~~~~~~~~~~~~~~D~vvh~A~~ 76 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGIT-DILVVDNLRDGHKFLNLADLVIADYID---KEDFLDRLEKGAFGKIEAIFHQGAC 76 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCc-eEEEEecCCCchhhhhhhheeeeccCc---chhHHHHHHhhccCCCCEEEECccc
Confidence 679999999999999999988842 688888654211111111100000111 11122222 2589999999986
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512 121 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 159 (354)
Q Consensus 121 ~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t 159 (354)
.........+....|+....++++.+.+... . ++.+|
T Consensus 77 ~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~-~v~~S 113 (314)
T TIGR02197 77 SDTTETDGEYMMENNYQYSKRLLDWCAEKGI-P-FIYAS 113 (314)
T ss_pred cCccccchHHHHHHHHHHHHHHHHHHHHhCC-c-EEEEc
Confidence 4322233455678899999999999988754 3 44444
No 137
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=97.57 E-value=0.00081 Score=66.11 Aligned_cols=77 Identities=22% Similarity=0.225 Sum_probs=51.0
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCch-hHHHHHhcCCCC-CeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHMDTG-AVVRGFLGQPQLENALTGMDLVIIPAG 119 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~-g~~~dl~~~~~~-~~v~~~~~~~d~~~al~~aDvVIi~ag 119 (354)
++||.|||| |+||+.+|..|++++. .+|++.|+...+ ..+.+..+.... ..+.. .....+.+++++.|+||.++.
T Consensus 1 m~~ilviGa-G~Vg~~va~~la~~~d-~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~-~d~~al~~li~~~d~VIn~~p 77 (389)
T COG1748 1 MMKILVIGA-GGVGSVVAHKLAQNGD-GEVTIADRSKEKCARIAELIGGKVEALQVDA-ADVDALVALIKDFDLVINAAP 77 (389)
T ss_pred CCcEEEECC-chhHHHHHHHHHhCCC-ceEEEEeCCHHHHHHHHhhccccceeEEecc-cChHHHHHHHhcCCEEEEeCC
Confidence 479999999 9999999999999885 599999997521 122222211110 11111 112345788999999999975
Q ss_pred CC
Q 018512 120 VP 121 (354)
Q Consensus 120 ~~ 121 (354)
..
T Consensus 78 ~~ 79 (389)
T COG1748 78 PF 79 (389)
T ss_pred ch
Confidence 33
No 138
>PRK14620 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=97.56 E-value=0.00054 Score=66.03 Aligned_cols=97 Identities=19% Similarity=0.388 Sum_probs=62.6
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhc----CC------CCCeEEEEeCCCcHHhhh-CCC
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISH----MD------TGAVVRGFLGQPQLENAL-TGM 111 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~----~~------~~~~v~~~~~~~d~~~al-~~a 111 (354)
|||+|||| |.+|+.++..|...++ +|.++++++. .+..+.. .. ....++. +.++.+++ .++
T Consensus 1 MkI~IiGa-Ga~G~ala~~L~~~g~--~V~l~~r~~~--~~~~i~~~~~~~~~~~~~~~~~~i~~---~~~~~~~~~~~~ 72 (326)
T PRK14620 1 MKISILGA-GSFGTAIAIALSSKKI--SVNLWGRNHT--TFESINTKRKNLKYLPTCHLPDNISV---KSAIDEVLSDNA 72 (326)
T ss_pred CEEEEECc-CHHHHHHHHHHHHCCC--eEEEEecCHH--HHHHHHHcCCCcccCCCCcCCCCeEE---eCCHHHHHhCCC
Confidence 68999999 9999999999999887 8999999652 1122221 10 0112333 24666666 589
Q ss_pred cEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhh-h-CCCeEEEEecCCCC
Q 018512 112 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAK-C-CPNATVNLISNPVN 163 (354)
Q Consensus 112 DvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~-~-~p~a~viv~tNPv~ 163 (354)
|+||++.. ...+.++++.+.. + .++..|+..+|=.+
T Consensus 73 Dliiiavk----------------s~~~~~~l~~l~~~~l~~~~~vv~~~nGi~ 110 (326)
T PRK14620 73 TCIILAVP----------------TQQLRTICQQLQDCHLKKNTPILICSKGIE 110 (326)
T ss_pred CEEEEEeC----------------HHHHHHHHHHHHHhcCCCCCEEEEEEcCee
Confidence 99999842 1234455555554 3 36777777777664
No 139
>PRK06249 2-dehydropantoate 2-reductase; Provisional
Probab=97.56 E-value=0.00052 Score=65.84 Aligned_cols=122 Identities=16% Similarity=0.255 Sum_probs=72.3
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHH---HHhcCCCCC---eEEEEeCCCcHHhhhCCCc
Q 018512 39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTA---DISHMDTGA---VVRGFLGQPQLENALTGMD 112 (354)
Q Consensus 39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~---dl~~~~~~~---~v~~~~~~~d~~~al~~aD 112 (354)
++..|||+|+|+ |.+|..++..|...|+ +|.+++++..+.... .+....... .+.. .++ .++...+|
T Consensus 2 ~~~~m~I~IiG~-GaiG~~lA~~L~~~g~--~V~~~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~---~~~-~~~~~~~D 74 (313)
T PRK06249 2 DSETPRIGIIGT-GAIGGFYGAMLARAGF--DVHFLLRSDYEAVRENGLQVDSVHGDFHLPPVQA---YRS-AEDMPPCD 74 (313)
T ss_pred CCcCcEEEEECC-CHHHHHHHHHHHHCCC--eEEEEEeCCHHHHHhCCeEEEeCCCCeeecCceE---Ecc-hhhcCCCC
Confidence 456689999999 9999999999999887 899999875211111 000000000 1111 122 23578899
Q ss_pred EEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhh-CCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe-ccc
Q 018512 113 LVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKC-CPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TML 190 (354)
Q Consensus 113 vVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~-~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~-t~l 190 (354)
+||++.-... ..+.++.+... .+++.|+...|=.+..- .+.+. +|+.+|++- +..
T Consensus 75 ~vilavK~~~----------------~~~~~~~l~~~~~~~~~iv~lqNG~~~~e-----~l~~~--~~~~~v~~g~~~~ 131 (313)
T PRK06249 75 WVLVGLKTTA----------------NALLAPLIPQVAAPDAKVLLLQNGLGVEE-----QLREI--LPAEHLLGGLCFI 131 (313)
T ss_pred EEEEEecCCC----------------hHhHHHHHhhhcCCCCEEEEecCCCCcHH-----HHHHH--CCCCcEEEEeeeE
Confidence 9999843221 12333344333 37888888888776542 23332 677787654 443
No 140
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=97.56 E-value=0.00073 Score=65.21 Aligned_cols=71 Identities=25% Similarity=0.397 Sum_probs=48.8
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhc-----C-CC--CCeEEEEeCCCcHHhhhCCCcE
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISH-----M-DT--GAVVRGFLGQPQLENALTGMDL 113 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~-----~-~~--~~~v~~~~~~~d~~~al~~aDv 113 (354)
.|||+|||+ |.+|+.++..|+..|+ +|+++|+++.......-.+ . .. ...+.. +.++.++++++|+
T Consensus 4 ~m~I~iIG~-G~mG~~ia~~L~~~G~--~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~---~~~~~e~~~~aD~ 77 (328)
T PRK14618 4 GMRVAVLGA-GAWGTALAVLAASKGV--PVRLWARRPEFAAALAAERENREYLPGVALPAELYP---TADPEEALAGADF 77 (328)
T ss_pred CCeEEEECc-CHHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEE---eCCHHHHHcCCCE
Confidence 689999999 9999999999999888 8999999752211111111 0 10 011222 3466778899999
Q ss_pred EEEcC
Q 018512 114 VIIPA 118 (354)
Q Consensus 114 VIi~a 118 (354)
||++.
T Consensus 78 Vi~~v 82 (328)
T PRK14618 78 AVVAV 82 (328)
T ss_pred EEEEC
Confidence 99984
No 141
>PRK05866 short chain dehydrogenase; Provisional
Probab=97.55 E-value=0.0014 Score=62.13 Aligned_cols=106 Identities=17% Similarity=0.198 Sum_probs=61.6
Q ss_pred HHHHhccCCCcc---cchhhhhhhhcccCCCCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHH
Q 018512 12 ARISAHLYPPNL---QENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADI 86 (354)
Q Consensus 12 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl 86 (354)
.|+..+++--+| ..++.+..++.++......++|.|+||+|.+|..++..|+..|. +|+++|++. ......++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vlItGasggIG~~la~~La~~G~--~Vi~~~R~~~~l~~~~~~l 84 (293)
T PRK05866 7 RRLTDQLTLAGMRPPISPQLLINRPPRQPVDLTGKRILLTGASSGIGEAAAEQFARRGA--TVVAVARREDLLDAVADRI 84 (293)
T ss_pred HHHHHHHHHhccCCCCCchhhcCCCCCCCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHH
Confidence 344444444444 23344443444432233446899999999999999999999887 899999875 22222333
Q ss_pred hcCCCCCeEEEE----eCCCcHHhhh-------CCCcEEEEcCCCC
Q 018512 87 SHMDTGAVVRGF----LGQPQLENAL-------TGMDLVIIPAGVP 121 (354)
Q Consensus 87 ~~~~~~~~v~~~----~~~~d~~~al-------~~aDvVIi~ag~~ 121 (354)
.... ..+..+ ....+..+++ .+.|+||++||..
T Consensus 85 ~~~~--~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~id~li~~AG~~ 128 (293)
T PRK05866 85 TRAG--GDAMAVPCDLSDLDAVDALVADVEKRIGGVDILINNAGRS 128 (293)
T ss_pred HhcC--CcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 2211 111111 1111222333 3789999999864
No 142
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=97.54 E-value=0.0031 Score=58.01 Aligned_cols=117 Identities=14% Similarity=0.172 Sum_probs=67.0
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh-------C
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------T 109 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al-------~ 109 (354)
.+|.|+||+|.+|.+++..|+..|. +|+++|++. ......++........+..+. +-++ ...++ .
T Consensus 3 k~ilItG~~~~IG~~la~~l~~~g~--~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~ 80 (259)
T PRK12384 3 QVAVVIGGGQTLGAFLCHGLAEEGY--RVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFG 80 (259)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 3799999999999999999999887 899999875 222222232211101122211 1122 22222 4
Q ss_pred CCcEEEEcCCCCCCC---CCCHHH---HHHHHHHH----HHHHHHHHhhhCCCeEEEEecCC
Q 018512 110 GMDLVIIPAGVPRKP---GMTRDD---LFNINAGI----VRTLCEGIAKCCPNATVNLISNP 161 (354)
Q Consensus 110 ~aDvVIi~ag~~~~~---g~~r~d---~~~~n~~~----~~~i~~~i~~~~p~a~viv~tNP 161 (354)
..|+||+++|.+... .....+ .+..|+.. .+.+.+.+.+..+++.++++|..
T Consensus 81 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~ 142 (259)
T PRK12384 81 RVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSK 142 (259)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCc
Confidence 679999999865322 122222 33455544 45566666555545667766653
No 143
>PRK15182 Vi polysaccharide biosynthesis protein TviB; Provisional
Probab=97.54 E-value=0.0012 Score=66.22 Aligned_cols=113 Identities=15% Similarity=0.134 Sum_probs=68.2
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCC------------CCeEEEEeCCCcHHhh
Q 018512 40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT------------GAVVRGFLGQPQLENA 107 (354)
Q Consensus 40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~------------~~~v~~~~~~~d~~~a 107 (354)
.++|||+|||. |+||..+|..|+. ++ +|+.||+++. .+..|..... ...+.. +++. ++
T Consensus 4 ~~~mkI~vIGl-GyvGlpmA~~la~-~~--~V~g~D~~~~--~ve~l~~G~~~~~e~~~~~l~~~g~l~~---t~~~-~~ 73 (425)
T PRK15182 4 IDEVKIAIIGL-GYVGLPLAVEFGK-SR--QVVGFDVNKK--RILELKNGVDVNLETTEEELREARYLKF---TSEI-EK 73 (425)
T ss_pred CCCCeEEEECc-CcchHHHHHHHhc-CC--EEEEEeCCHH--HHHHHHCcCCCCCCCCHHHHHhhCCeeE---EeCH-HH
Confidence 45689999999 9999999999876 45 9999999862 2233332110 011222 3444 57
Q ss_pred hCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEE-ecCCCCCchHH
Q 018512 108 LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNL-ISNPVNSTVPI 168 (354)
Q Consensus 108 l~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv-~tNPv~~~~~~ 168 (354)
+++||++|++.+.|.+.... ..+..+....+.|.++. +..+||+ .|-|.+....+
T Consensus 74 ~~~advvii~Vptp~~~~~~------~dl~~v~~a~~~i~~~l~~g~lVI~~STv~pgtt~~~ 130 (425)
T PRK15182 74 IKECNFYIITVPTPINTYKQ------PDLTPLIKASETVGTVLNRGDIVVYESTVYPGCTEEE 130 (425)
T ss_pred HcCCCEEEEEcCCCCCCCCC------cchHHHHHHHHHHHHhcCCCCEEEEecCCCCcchHHH
Confidence 89999999998888543211 12223333344444443 3444444 46777665533
No 144
>PRK08267 short chain dehydrogenase; Provisional
Probab=97.54 E-value=0.0019 Score=59.64 Aligned_cols=114 Identities=24% Similarity=0.292 Sum_probs=65.0
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCch--hHHHHHhcCCCCCeE-EE-EeCCCcHHhhh--------CC
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVV-RG-FLGQPQLENAL--------TG 110 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~--g~~~dl~~~~~~~~v-~~-~~~~~d~~~al--------~~ 110 (354)
+++.|+||+|.+|..++..|+..|. +|+++|++... ....++.. ..... .. +....++.+++ ..
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~ 77 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGW--RVGAYDINEAGLAALAAELGA--GNAWTGALDVTDRAAWDAALADFAAATGGR 77 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHhcC--CceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 4699999999999999999999887 89999987521 11122221 11111 11 11112223333 34
Q ss_pred CcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHhh---hCCCeEEEEecC
Q 018512 111 MDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEGIAK---CCPNATVNLISN 160 (354)
Q Consensus 111 aDvVIi~ag~~~~~g---~~---r~d~~~~n~~~~~~i~~~i~~---~~p~a~viv~tN 160 (354)
.|+||+++|...... .+ ....+..|+.....+.+.+.+ ..+.+.++++|.
T Consensus 78 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS 136 (260)
T PRK08267 78 LDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSS 136 (260)
T ss_pred CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCc
Confidence 599999998753221 11 234456677655555555432 234455665554
No 145
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=97.53 E-value=0.00076 Score=63.87 Aligned_cols=108 Identities=16% Similarity=0.083 Sum_probs=67.9
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc-hh-HHHHHhcCCCCCeEEEEe-C---CCcHHhhhC--CCcEEE
Q 018512 44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PG-VTADISHMDTGAVVRGFL-G---QPQLENALT--GMDLVI 115 (354)
Q Consensus 44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~-~g-~~~dl~~~~~~~~v~~~~-~---~~d~~~al~--~aDvVI 115 (354)
||.|+||+|++|+.++..|...+. +|+++|.... .. ....+.+.. .+..+. + ..++.++++ +.|+||
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~--~V~~~~~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~d~vv 75 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGH--EVVVLDNLSNGSPEALKRGERIT---RVTFVEGDLRDRELLDRLFEEHKIDAVI 75 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCC--eEEEEeCCCccchhhhhhhcccc---ceEEEECCCCCHHHHHHHHHhCCCcEEE
Confidence 689999999999999999998887 7888886431 11 111111110 122111 1 122344453 699999
Q ss_pred EcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEE
Q 018512 116 IPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVN 156 (354)
Q Consensus 116 i~ag~~~~~--g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~vi 156 (354)
+++|..... .....+.+..|+.....+++.+.+.+...+|.
T Consensus 76 ~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~ 118 (328)
T TIGR01179 76 HFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIF 118 (328)
T ss_pred ECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEE
Confidence 999864321 12234556789999999999988776554443
No 146
>PRK12320 hypothetical protein; Provisional
Probab=97.53 E-value=0.00076 Score=71.21 Aligned_cols=100 Identities=13% Similarity=0.107 Sum_probs=66.9
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEE-EeCCCcHHhhhCCCcEEEEcCCCC
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENALTGMDLVIIPAGVP 121 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~~~d~~~al~~aDvVIi~ag~~ 121 (354)
|||.|+||+|++|++++..|+..|+ +|+.+|..... ..+... ..+.. +. ...+.+++.++|+||++++..
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~G~--~Vi~ldr~~~~-----~~~~~v-e~v~~Dl~-d~~l~~al~~~D~VIHLAa~~ 71 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAAGH--TVSGIAQHPHD-----ALDPRV-DYVCASLR-NPVLQELAGEADAVIHLAPVD 71 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC--EEEEEeCChhh-----cccCCc-eEEEccCC-CHHHHHHhcCCCEEEEcCccC
Confidence 6999999999999999999999887 89999975421 111110 11111 11 112456678999999998753
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512 122 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 159 (354)
Q Consensus 122 ~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t 159 (354)
. . +....|+....++++.+++.+. .+|.+|
T Consensus 72 ~--~----~~~~vNv~Gt~nLleAA~~~Gv--RiV~~S 101 (699)
T PRK12320 72 T--S----APGGVGITGLAHVANAAARAGA--RLLFVS 101 (699)
T ss_pred c--c----chhhHHHHHHHHHHHHHHHcCC--eEEEEE
Confidence 1 1 1124688899999999987764 344444
No 147
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=97.52 E-value=0.002 Score=59.28 Aligned_cols=115 Identities=15% Similarity=0.191 Sum_probs=67.9
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCc---HHhh-------h
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENA-------L 108 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~a-------l 108 (354)
.++|.|+||+|.+|..++..|+..|. +|++.|+++ ......++.... ..+..+. +-+| +.++ +
T Consensus 10 ~k~vlItGa~g~iG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~i~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 85 (255)
T PRK07523 10 GRRALVTGSSQGIGYALAEGLAQAGA--EVILNGRDPAKLAAAAESLKGQG--LSAHALAFDVTDHDAVRAAIDAFEAEI 85 (255)
T ss_pred CCEEEEECCcchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhcC--ceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence 45899999999999999999999887 899999876 222222333221 1122110 1112 2222 2
Q ss_pred CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhhC---CCeEEEEecC
Q 018512 109 TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKCC---PNATVNLISN 160 (354)
Q Consensus 109 ~~aDvVIi~ag~~~~~---g~~---r~d~~~~n~~~~~~i~~~i~~~~---p~a~viv~tN 160 (354)
...|+||+.+|..... ..+ ..+.+..|+.....+.+.+.++. ..+.|+++|.
T Consensus 86 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss 146 (255)
T PRK07523 86 GPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIAS 146 (255)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEcc
Confidence 4579999998864211 111 23345677766666666555442 3456666664
No 148
>PRK05717 oxidoreductase; Validated
Probab=97.51 E-value=0.0015 Score=60.20 Aligned_cols=148 Identities=15% Similarity=0.167 Sum_probs=82.5
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCe-EEE-EeCCCcHHhh-------hCCCc
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAV-VRG-FLGQPQLENA-------LTGMD 112 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~-v~~-~~~~~d~~~a-------l~~aD 112 (354)
.++|.|+||+|++|++++..|+..|. +|+++|++....... ..+...... +.. +....+..++ +...|
T Consensus 10 ~k~vlItG~sg~IG~~~a~~l~~~g~--~v~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id 86 (255)
T PRK05717 10 GRVALVTGAARGIGLGIAAWLIAEGW--QVVLADLDRERGSKV-AKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLD 86 (255)
T ss_pred CCEEEEeCCcchHHHHHHHHHHHcCC--EEEEEcCCHHHHHHH-HHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 45799999999999999999999887 899999865221111 111111111 111 1011111111 23479
Q ss_pred EEEEcCCCCCCCC-----CC---HHHHHHHHHHHHHHHHHHHhhhC--CCeEEEEecCCCCCchHHHHHHHHHhCCCCCC
Q 018512 113 LVIIPAGVPRKPG-----MT---RDDLFNINAGIVRTLCEGIAKCC--PNATVNLISNPVNSTVPIAAEVFKKAGTYDPK 182 (354)
Q Consensus 113 vVIi~ag~~~~~g-----~~---r~d~~~~n~~~~~~i~~~i~~~~--p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~ 182 (354)
+||+++|...... .+ ....+..|+.....+.+.+.++. ..+.||++|...... +.|..
T Consensus 87 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~------------~~~~~ 154 (255)
T PRK05717 87 ALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQ------------SEPDT 154 (255)
T ss_pred EEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcC------------CCCCC
Confidence 9999998653211 12 23456677777777777765432 345566665432111 22323
Q ss_pred CEEEeccchHHHHHHHHHHHhC
Q 018512 183 KLLGVTMLDVVRANTFVAEVLG 204 (354)
Q Consensus 183 kviG~t~ld~~r~~~~la~~l~ 204 (354)
-.+|.+......+.+.+++.++
T Consensus 155 ~~Y~~sKaa~~~~~~~la~~~~ 176 (255)
T PRK05717 155 EAYAASKGGLLALTHALAISLG 176 (255)
T ss_pred cchHHHHHHHHHHHHHHHHHhc
Confidence 3456654444456677777765
No 149
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=97.49 E-value=0.0014 Score=65.57 Aligned_cols=109 Identities=20% Similarity=0.205 Sum_probs=66.7
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCC--C--------------CCeEEEEeCCCcHH
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD--T--------------GAVVRGFLGQPQLE 105 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~--~--------------~~~v~~~~~~~d~~ 105 (354)
.+||+|||. |++|..+|..|+..|+ +|+.+|+++.+-. .+.... . ...+.. +++
T Consensus 3 ~~kI~VIGl-G~~G~~~A~~La~~G~--~V~~~D~~~~~v~--~l~~g~~~~~e~~l~~~l~~~~~~g~l~~---~~~-- 72 (415)
T PRK11064 3 FETISVIGL-GYIGLPTAAAFASRQK--QVIGVDINQHAVD--TINRGEIHIVEPDLDMVVKTAVEGGYLRA---TTT-- 72 (415)
T ss_pred ccEEEEECc-chhhHHHHHHHHhCCC--EEEEEeCCHHHHH--HHHCCCCCcCCCCHHHHHHHHhhcCceee---ecc--
Confidence 579999999 9999999999999997 9999999862211 122110 0 011211 122
Q ss_pred hhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEe-cCCCCCchHH
Q 018512 106 NALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLI-SNPVNSTVPI 168 (354)
Q Consensus 106 ~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~-tNPv~~~~~~ 168 (354)
.++||+||++...|..... ..++..+.+.++.+.++. ++.+||+- |.|.+..-.+
T Consensus 73 --~~~aDvvii~vptp~~~~~------~~dl~~v~~~~~~i~~~l~~g~iVI~~STv~pgtt~~~ 129 (415)
T PRK11064 73 --PEPADAFLIAVPTPFKGDH------EPDLTYVEAAAKSIAPVLKKGDLVILESTSPVGATEQM 129 (415)
T ss_pred --cccCCEEEEEcCCCCCCCC------CcChHHHHHHHHHHHHhCCCCCEEEEeCCCCCCHHHHH
Confidence 3589999999887753221 112334445555555554 45555554 4677665444
No 150
>PRK12829 short chain dehydrogenase; Provisional
Probab=97.49 E-value=0.0027 Score=58.42 Aligned_cols=114 Identities=19% Similarity=0.323 Sum_probs=64.9
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEe-CCCc---HHhh------
Q 018512 40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENA------ 107 (354)
Q Consensus 40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~-~~~d---~~~a------ 107 (354)
.+.+++.|+||+|.+|+.++..|+.+|. +|+++++++. .....++... .+..+. +-.| +.++
T Consensus 9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~ 82 (264)
T PRK12829 9 LDGLRVLVTGGASGIGRAIAEAFAEAGA--RVHVCDVSEAALAATAARLPGA----KVTATVADVADPAQVERVFDTAVE 82 (264)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHhcC----ceEEEEccCCCHHHHHHHHHHHHH
Confidence 3456999999999999999999999888 8999998752 1111122211 111111 1112 1122
Q ss_pred -hCCCcEEEEcCCCCCCCC----CCH---HHHHHHHHHHHHHHHHHH----hhhCCCeEEEEec
Q 018512 108 -LTGMDLVIIPAGVPRKPG----MTR---DDLFNINAGIVRTLCEGI----AKCCPNATVNLIS 159 (354)
Q Consensus 108 -l~~aDvVIi~ag~~~~~g----~~r---~d~~~~n~~~~~~i~~~i----~~~~p~a~viv~t 159 (354)
+.++|+||+.+|.....+ .+. ...+..|+.....+.+.+ .......+|++.|
T Consensus 83 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~s 146 (264)
T PRK12829 83 RFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALS 146 (264)
T ss_pred HhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEec
Confidence 347899999988652222 122 233455655555555544 3322225555555
No 151
>TIGR03376 glycerol3P_DH glycerol-3-phosphate dehydrogenase (NAD(+)). Members of this protein family are the eukaryotic enzyme, glycerol-3-phosphate dehydrogenase (NAD(+)) (EC 1.1.1.8). Enzymatic activity for 1.1.1.8 is defined as sn-glycerol 3-phosphate + NAD(+) = glycerone phosphate + NADH. Note the very similar reactions of enzymes defined as EC 1.1.1.94 and 1.1.99.5, assigned to families of proteins in the bacteria.
Probab=97.48 E-value=0.00069 Score=65.88 Aligned_cols=96 Identities=22% Similarity=0.392 Sum_probs=61.6
Q ss_pred eEEEEcCCCchHHHHHHHHHhCC------CCcEEEEEecCC---chhHHHHHh--cCCC--------CCeEEEEeCCCcH
Q 018512 44 KVAILGAAGGIGQPLAMLMKINP------LVSVLHLYDVVN---TPGVTADIS--HMDT--------GAVVRGFLGQPQL 104 (354)
Q Consensus 44 kI~IiGa~G~vG~~~a~~l~~~~------~~~ei~L~D~~~---~~g~~~dl~--~~~~--------~~~v~~~~~~~d~ 104 (354)
||+|||+ |..|+++|..|..++ ...+|.|+.+++ .......++ |... ...++. ++|+
T Consensus 1 kI~VIGa-G~wGtALA~~la~ng~~~~~~~~~~V~lw~~~~~~~~~~~~~~in~~~~n~~ylpgi~Lp~~i~a---t~dl 76 (342)
T TIGR03376 1 RVAVVGS-GNWGTAIAKIVAENARALPELFEESVRMWVFEEEIEGRNLTEIINTTHENVKYLPGIKLPANLVA---VPDL 76 (342)
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCcccccCCceEEEEEeccccCCHHHHHHHHhcCCCccccCCCcCCCCeEE---ECCH
Confidence 6999999 999999999999877 113999999843 122223332 2111 112333 4688
Q ss_pred HhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEec
Q 018512 105 ENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLIS 159 (354)
Q Consensus 105 ~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~t 159 (354)
++++++||+||++. | ...+++++++++.+- ++..++.+|
T Consensus 77 ~eal~~ADiIIlAV--P--------------s~~i~~vl~~l~~~l~~~~~iVs~t 116 (342)
T TIGR03376 77 VEAAKGADILVFVI--P--------------HQFLEGICKQLKGHVKPNARAISCI 116 (342)
T ss_pred HHHHhcCCEEEEEC--C--------------hHHHHHHHHHHHhhcCCCCEEEEEe
Confidence 89999999999973 2 134556666666543 345555554
No 152
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=97.48 E-value=0.001 Score=60.87 Aligned_cols=113 Identities=13% Similarity=0.210 Sum_probs=65.7
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh-------
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENAL------- 108 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al------- 108 (354)
.++|.|+||+|.+|++++..|+..|. +|++++++.. .....++.... ..+..+. +-.+ +.+++
T Consensus 4 ~~~vlItG~sg~iG~~la~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 79 (258)
T PRK12429 4 GKVALVTGAASGIGLEIALALAKEGA--KVVIADLNDEAAAAAAEALQKAG--GKAIGVAMDVTDEEAINAGIDYAVETF 79 (258)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 35899999999999999999999887 8999998762 22233343221 1122111 1112 22222
Q ss_pred CCCcEEEEcCCCCCCCC---CC---HHHHHHHHHHH----HHHHHHHHhhhCCCeEEEEec
Q 018512 109 TGMDLVIIPAGVPRKPG---MT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLIS 159 (354)
Q Consensus 109 ~~aDvVIi~ag~~~~~g---~~---r~d~~~~n~~~----~~~i~~~i~~~~p~a~viv~t 159 (354)
.+.|+||++++...... .+ ..+.+..|+.. .+.+.+.+++.... .++++|
T Consensus 80 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-~iv~is 139 (258)
T PRK12429 80 GGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGG-RIINMA 139 (258)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCe-EEEEEc
Confidence 36899999988643211 11 12234455554 66666666655433 444444
No 153
>PRK12937 short chain dehydrogenase; Provisional
Probab=97.48 E-value=0.0019 Score=58.70 Aligned_cols=147 Identities=14% Similarity=0.084 Sum_probs=80.9
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC---chhHHHHHhcCCCCCeEEEEe-C---CCcHHhhh------
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-G---QPQLENAL------ 108 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~---~~g~~~dl~~~~~~~~v~~~~-~---~~d~~~al------ 108 (354)
.++|.|+||+|.+|+.++..|+..|. ++++.+.+. ......++.... ..+..+. + ..++++++
T Consensus 5 ~~~vlItG~~~~iG~~la~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~ 80 (245)
T PRK12937 5 NKVAIVTGASRGIGAAIARRLAADGF--AVAVNYAGSAAAADELVAEIEAAG--GRAIAVQADVADAAAVTRLFDAAETA 80 (245)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEecCCCHHHHHHHHHHHHhcC--CeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 45899999999999999999999998 777776644 122223333222 1222211 1 11223333
Q ss_pred -CCCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHhhh-CCCeEEEEecCCCCCchHHHHHHHHHhCCCC
Q 018512 109 -TGMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEGIAKC-CPNATVNLISNPVNSTVPIAAEVFKKAGTYD 180 (354)
Q Consensus 109 -~~aDvVIi~ag~~~~~g---~~---r~d~~~~n~~~~~~i~~~i~~~-~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p 180 (354)
.+.|+||+++|...... .+ ....+..|+.....+++.+.+. .+.+.++++|.-... .+.|
T Consensus 81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~------------~~~~ 148 (245)
T PRK12937 81 FGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIA------------LPLP 148 (245)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeecccc------------CCCC
Confidence 36899999998643211 11 2234566766666666555443 245666666532211 1233
Q ss_pred CCCEEEeccchHHHHHHHHHHHhC
Q 018512 181 PKKLLGVTMLDVVRANTFVAEVLG 204 (354)
Q Consensus 181 ~~kviG~t~ld~~r~~~~la~~l~ 204 (354)
....++.+......+.+.+++.++
T Consensus 149 ~~~~Y~~sK~a~~~~~~~~a~~~~ 172 (245)
T PRK12937 149 GYGPYAASKAAVEGLVHVLANELR 172 (245)
T ss_pred CCchhHHHHHHHHHHHHHHHHHhh
Confidence 334455544333345555666553
No 154
>PRK07102 short chain dehydrogenase; Provisional
Probab=97.47 E-value=0.0043 Score=56.59 Aligned_cols=115 Identities=19% Similarity=0.089 Sum_probs=67.3
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEe-C---CCcHHhhh----CCCc
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-G---QPQLENAL----TGMD 112 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~-~---~~d~~~al----~~aD 112 (354)
++|.|+||+|.+|..++..|+..|. +|++.|+++. .....++.... ...+..+. + ..++++.+ +..|
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d 78 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGA--RLYLAARDVERLERLADDLRARG-AVAVSTHELDILDTASHAAFLDSLPALPD 78 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCC--EEEEEeCCHHHHHHHHHHHHHhc-CCeEEEEecCCCChHHHHHHHHHHhhcCC
Confidence 5899999999999999999999887 8999998762 22223333221 12222211 1 11222222 3459
Q ss_pred EEEEcCCCCCC---CCCCHH---HHHHHHHHHHHHHHHHHhhhC---CCeEEEEecC
Q 018512 113 LVIIPAGVPRK---PGMTRD---DLFNINAGIVRTLCEGIAKCC---PNATVNLISN 160 (354)
Q Consensus 113 vVIi~ag~~~~---~g~~r~---d~~~~n~~~~~~i~~~i~~~~---p~a~viv~tN 160 (354)
+||+++|.... ...+.. +.+..|+.....+.+.+..+. ..+.++++|-
T Consensus 79 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS 135 (243)
T PRK07102 79 IVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISS 135 (243)
T ss_pred EEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEec
Confidence 99998875321 122332 345667776666666655432 2455666653
No 155
>PRK12439 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=97.47 E-value=0.00066 Score=66.04 Aligned_cols=100 Identities=18% Similarity=0.175 Sum_probs=65.3
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcC----CCC-------CeEEEEeCCCcHHhhh
Q 018512 40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHM----DTG-------AVVRGFLGQPQLENAL 108 (354)
Q Consensus 40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~----~~~-------~~v~~~~~~~d~~~al 108 (354)
.++|||+|+|+ |.+|+.++..|...+ +++++..++.. ..++... ... ..+.. ++|+.+++
T Consensus 5 ~~~mkI~IiGa-Ga~G~alA~~La~~g---~v~l~~~~~~~--~~~i~~~~~~~~~l~~~~~l~~~i~~---t~d~~~a~ 75 (341)
T PRK12439 5 KREPKVVVLGG-GSWGTTVASICARRG---PTLQWVRSAET--ADDINDNHRNSRYLGNDVVLSDTLRA---TTDFAEAA 75 (341)
T ss_pred cCCCeEEEECC-CHHHHHHHHHHHHCC---CEEEEeCCHHH--HHHHHhcCCCcccCCCCcccCCCeEE---ECCHHHHH
Confidence 45689999999 999999999999887 36777765421 2222211 011 12222 35777889
Q ss_pred CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCC
Q 018512 109 TGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNS 164 (354)
Q Consensus 109 ~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~ 164 (354)
+++|+||++.. ...++++++.+..+- ++..++.++|-.+.
T Consensus 76 ~~aDlVilavp----------------s~~~~~vl~~i~~~l~~~~~vIsl~kGi~~ 116 (341)
T PRK12439 76 NCADVVVMGVP----------------SHGFRGVLTELAKELRPWVPVVSLVKGLEQ 116 (341)
T ss_pred hcCCEEEEEeC----------------HHHHHHHHHHHHhhcCCCCEEEEEEeCCcC
Confidence 99999999842 124555666666543 56778888887664
No 156
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.47 E-value=0.0039 Score=56.83 Aligned_cols=36 Identities=22% Similarity=0.274 Sum_probs=32.5
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 78 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~ 78 (354)
+.++|+|+||+|.+|..++..|+..|. +|++++++.
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~--~V~~~~r~~ 39 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGA--RVVVTDRNE 39 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCH
Confidence 346899999999999999999999887 899999976
No 157
>PRK07326 short chain dehydrogenase; Provisional
Probab=97.47 E-value=0.0022 Score=58.05 Aligned_cols=114 Identities=18% Similarity=0.174 Sum_probs=65.1
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEe-CCC---cHHhhh-------C
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQP---QLENAL-------T 109 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~-~~~---d~~~al-------~ 109 (354)
++|+|+||+|.+|+.++..|+..|. +|+++++++. .....++... ..+..+. +-. ++.+++ .
T Consensus 7 ~~ilItGatg~iG~~la~~l~~~g~--~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (237)
T PRK07326 7 KVALITGGSKGIGFAIAEALLAEGY--KVAITARDQKELEEAAAELNNK---GNVLGLAADVRDEADVQRAVDAIVAAFG 81 (237)
T ss_pred CEEEEECCCCcHHHHHHHHHHHCCC--EEEEeeCCHHHHHHHHHHHhcc---CcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 5899999999999999999998877 8999998762 2222333321 1122111 111 222222 3
Q ss_pred CCcEEEEcCCCCCCC---CCCHH---HHHHHHHHHHHHHHHHHhhh--CCCeEEEEecCC
Q 018512 110 GMDLVIIPAGVPRKP---GMTRD---DLFNINAGIVRTLCEGIAKC--CPNATVNLISNP 161 (354)
Q Consensus 110 ~aDvVIi~ag~~~~~---g~~r~---d~~~~n~~~~~~i~~~i~~~--~p~a~viv~tNP 161 (354)
++|+||+++|..... ..+.. +.+..|+.....+.+.+.+. ...+.++++|..
T Consensus 82 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~ 141 (237)
T PRK07326 82 GLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSL 141 (237)
T ss_pred CCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECCh
Confidence 799999998764321 12222 33455655555554444332 234556666643
No 158
>PRK07814 short chain dehydrogenase; Provisional
Probab=97.44 E-value=0.0024 Score=59.18 Aligned_cols=148 Identities=14% Similarity=0.116 Sum_probs=81.6
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEE-eCCCcH---Hhh-------
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGF-LGQPQL---ENA------- 107 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~-~~~~d~---~~a------- 107 (354)
+.+++.|+||+|.+|.+++..|+..|. +|++.|++.. +....++.... ..+..+ .+-++. .++
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 84 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGA--DVLIAARTESQLDEVAEQIRAAG--RRAHVVAADLAHPEATAGLAGQAVEA 84 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 456899999999999999999999887 9999998752 22233333221 122221 111222 122
Q ss_pred hCCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHh----hhCCCeEEEEecCCCCCchHHHHHHHHHhC
Q 018512 108 LTGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIA----KCCPNATVNLISNPVNSTVPIAAEVFKKAG 177 (354)
Q Consensus 108 l~~aDvVIi~ag~~~~~---g~~---r~d~~~~n~~~~~~i~~~i~----~~~p~a~viv~tNPv~~~~~~~~~~~~~~~ 177 (354)
+...|+||+.||..... ..+ ..+.+..|+.....+.+.+. +....+.++++|.-....
T Consensus 85 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~------------ 152 (263)
T PRK07814 85 FGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRL------------ 152 (263)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccC------------
Confidence 24789999998864221 112 22344556555555555443 334556666666432211
Q ss_pred CCCCCCEEEeccchHHHHHHHHHHHhC
Q 018512 178 TYDPKKLLGVTMLDVVRANTFVAEVLG 204 (354)
Q Consensus 178 ~~p~~kviG~t~ld~~r~~~~la~~l~ 204 (354)
+.+..-.++.+......+.+.++..+.
T Consensus 153 ~~~~~~~Y~~sK~a~~~~~~~~~~e~~ 179 (263)
T PRK07814 153 AGRGFAAYGTAKAALAHYTRLAALDLC 179 (263)
T ss_pred CCCCCchhHHHHHHHHHHHHHHHHHHC
Confidence 223333455543333445666666654
No 159
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=97.44 E-value=0.0021 Score=59.30 Aligned_cols=113 Identities=16% Similarity=0.162 Sum_probs=64.4
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCc---HHhh-------hC
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENA-------LT 109 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~a-------l~ 109 (354)
|++.|+||+|.+|..++..|+..|. +|++.|+++ ......++.+.. .+..+. +-+| .+++ +.
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~Dv~d~~~~~~~~~~~~~~~g 75 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKGA--RVVISSRNEENLEKALKELKEYG---EVYAVKADLSDKDDLKNLVKEAWELLG 75 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhcC---CceEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 6899999999999999999999997 899999876 222233343221 111111 1112 2222 34
Q ss_pred CCcEEEEcCCCCC-CC----CCCHHHH---HHHHH----HHHHHHHHHHhhhCCCeEEEEecC
Q 018512 110 GMDLVIIPAGVPR-KP----GMTRDDL---FNINA----GIVRTLCEGIAKCCPNATVNLISN 160 (354)
Q Consensus 110 ~aDvVIi~ag~~~-~~----g~~r~d~---~~~n~----~~~~~i~~~i~~~~p~a~viv~tN 160 (354)
..|++|+.+|... .+ ..+..++ +..|+ ...+.+.+.+.+....+.|+++|.
T Consensus 76 ~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS 138 (259)
T PRK08340 76 GIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSS 138 (259)
T ss_pred CCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeC
Confidence 7899999998642 11 1222222 22232 234455555543334566666653
No 160
>PRK06180 short chain dehydrogenase; Provisional
Probab=97.43 E-value=0.0036 Score=58.48 Aligned_cols=114 Identities=13% Similarity=0.089 Sum_probs=65.6
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh-------CC
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------TG 110 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al-------~~ 110 (354)
+++|.|+||+|.+|++++..|+..|. +|++++++.... .++.... ...+..+. +-+| +.+++ ..
T Consensus 4 ~~~vlVtGasggiG~~la~~l~~~G~--~V~~~~r~~~~~--~~l~~~~-~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~ 78 (277)
T PRK06180 4 MKTWLITGVSSGFGRALAQAALAAGH--RVVGTVRSEAAR--ADFEALH-PDRALARLLDVTDFDAIDAVVADAEATFGP 78 (277)
T ss_pred CCEEEEecCCChHHHHHHHHHHhCcC--EEEEEeCCHHHH--HHHHhhc-CCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 35799999999999999999999887 899999875211 1222211 11111110 1112 22222 35
Q ss_pred CcEEEEcCCCCCC---CCCCH---HHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecC
Q 018512 111 MDLVIIPAGVPRK---PGMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISN 160 (354)
Q Consensus 111 aDvVIi~ag~~~~---~g~~r---~d~~~~n~~~~~~i~~~i~~~---~p~a~viv~tN 160 (354)
.|+||+++|.... ...+. ...+..|+.....+.+.+.++ ...+.||++|.
T Consensus 79 ~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS 137 (277)
T PRK06180 79 IDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITS 137 (277)
T ss_pred CCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEec
Confidence 8999999986421 11222 233667777666666664432 12345565553
No 161
>PRK06924 short chain dehydrogenase; Provisional
Probab=97.43 E-value=0.0023 Score=58.55 Aligned_cols=34 Identities=18% Similarity=0.167 Sum_probs=30.8
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 78 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~ 78 (354)
++|.|+||+|.+|+.++..|+..|. +|+++++++
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~--~V~~~~r~~ 35 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGT--HVISISRTE 35 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCC--EEEEEeCCc
Confidence 4799999999999999999999887 899999865
No 162
>PRK14982 acyl-ACP reductase; Provisional
Probab=97.43 E-value=0.00085 Score=65.02 Aligned_cols=128 Identities=20% Similarity=0.213 Sum_probs=76.5
Q ss_pred HHHHHHh---ccCCCc-ccchhhhhhhhcc--cCC-CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--ch
Q 018512 10 RIARISA---HLYPPN-LQENSCLRQAKCR--AKG-GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TP 80 (354)
Q Consensus 10 ~~~~~~~---~~~~~~-~~~~~~~~~~~~~--~~~-~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~ 80 (354)
++.+|+- .+||-| +....+.+.+.-. ..+ .-..++|+|+||+|++|+.++..|....-..+|++++++. +.
T Consensus 116 ~~r~i~ie~~~~TtGNs~T~~ll~~~V~la~~~lg~~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~ 195 (340)
T PRK14982 116 QVRNTTLEWERFTTGNTHTAYVICRQVEQNAPRLGIDLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQ 195 (340)
T ss_pred ccccceeccccccCCchhHHHHHHHHHHHhHHHhccCcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHH
Confidence 4444444 456666 2444444422211 112 3455799999999999999999997643234899999865 22
Q ss_pred hHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecC
Q 018512 81 GVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN 160 (354)
Q Consensus 81 g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tN 160 (354)
....++.+. . -.++++++.++|+||.+++.+...-.+..++ .+..+++=.+.
T Consensus 196 ~La~el~~~----~------i~~l~~~l~~aDiVv~~ts~~~~~~I~~~~l------------------~~~~~viDiAv 247 (340)
T PRK14982 196 ELQAELGGG----K------ILSLEEALPEADIVVWVASMPKGVEIDPETL------------------KKPCLMIDGGY 247 (340)
T ss_pred HHHHHhccc----c------HHhHHHHHccCCEEEECCcCCcCCcCCHHHh------------------CCCeEEEEecC
Confidence 222222211 0 1246789999999999988764221222111 25567777788
Q ss_pred CCCCc
Q 018512 161 PVNST 165 (354)
Q Consensus 161 Pv~~~ 165 (354)
|=|+-
T Consensus 248 PRDVd 252 (340)
T PRK14982 248 PKNLD 252 (340)
T ss_pred CCCCC
Confidence 87776
No 163
>PRK05876 short chain dehydrogenase; Provisional
Probab=97.41 E-value=0.003 Score=59.21 Aligned_cols=115 Identities=17% Similarity=0.150 Sum_probs=65.7
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh-------
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL------- 108 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al------- 108 (354)
.+.+.|+||+|.+|++++..|+..|. +|++.|++. ......++.... ..+..+. +-+| +.+++
T Consensus 6 ~k~vlVTGas~gIG~ala~~La~~G~--~Vv~~~r~~~~l~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 81 (275)
T PRK05876 6 GRGAVITGGASGIGLATGTEFARRGA--RVVLGDVDKPGLRQAVNHLRAEG--FDVHGVMCDVRHREEVTHLADEAFRLL 81 (275)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 34799999999999999999999987 899999876 222233343221 1222211 1112 22222
Q ss_pred CCCcEEEEcCCCCCCC---CCCHH---HHHHHHHHHHH----HHHHHHhhhCCCeEEEEecC
Q 018512 109 TGMDLVIIPAGVPRKP---GMTRD---DLFNINAGIVR----TLCEGIAKCCPNATVNLISN 160 (354)
Q Consensus 109 ~~aDvVIi~ag~~~~~---g~~r~---d~~~~n~~~~~----~i~~~i~~~~p~a~viv~tN 160 (354)
...|+||+.||..... ..+.. ..+..|+.... .+.+.+.+....+.|+++|.
T Consensus 82 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS 143 (275)
T PRK05876 82 GHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTAS 143 (275)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCC
Confidence 3579999999864211 12222 23455654444 44444444443456666654
No 164
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=97.40 E-value=0.001 Score=55.44 Aligned_cols=104 Identities=25% Similarity=0.267 Sum_probs=56.9
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512 39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 118 (354)
Q Consensus 39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a 118 (354)
....+||.|||+ |.||.+++..|...++ +|.-+-... .....++.+.. +.... .++.+.+++||++|++.
T Consensus 7 ~~~~l~I~iIGa-GrVG~~La~aL~~ag~--~v~~v~srs-~~sa~~a~~~~--~~~~~----~~~~~~~~~aDlv~iav 76 (127)
T PF10727_consen 7 QAARLKIGIIGA-GRVGTALARALARAGH--EVVGVYSRS-PASAERAAAFI--GAGAI----LDLEEILRDADLVFIAV 76 (127)
T ss_dssp -----EEEEECT-SCCCCHHHHHHHHTTS--EEEEESSCH-H-HHHHHHC----TT---------TTGGGCC-SEEEE-S
T ss_pred CCCccEEEEECC-CHHHHHHHHHHHHCCC--eEEEEEeCC-ccccccccccc--ccccc----cccccccccCCEEEEEe
Confidence 445679999999 9999999999999997 666554432 22223334321 11111 23457789999999984
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhh--C-CCeEEEEec--CCCCCchHH
Q 018512 119 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKC--C-PNATVNLIS--NPVNSTVPI 168 (354)
Q Consensus 119 g~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~--~-p~a~viv~t--NPv~~~~~~ 168 (354)
. +| .+.++++++..+ . |+.+|+=.| -+++++.++
T Consensus 77 p---------Dd-------aI~~va~~La~~~~~~~g~iVvHtSGa~~~~vL~p~ 115 (127)
T PF10727_consen 77 P---------DD-------AIAEVAEQLAQYGAWRPGQIVVHTSGALGSDVLAPA 115 (127)
T ss_dssp ----------CC-------HHHHHHHHHHCC--S-TT-EEEES-SS--GGGGHHH
T ss_pred c---------hH-------HHHHHHHHHHHhccCCCCcEEEECCCCChHHhhhhH
Confidence 2 11 466778888776 2 444433332 566777653
No 165
>PRK07576 short chain dehydrogenase; Provisional
Probab=97.39 E-value=0.0023 Score=59.42 Aligned_cols=119 Identities=16% Similarity=0.177 Sum_probs=66.8
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEE--eCCCcHHhhh-------CC
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGF--LGQPQLENAL-------TG 110 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~--~~~~d~~~al-------~~ 110 (354)
..+|.|+||+|.+|..++..|+..|. .|+++|++.. .....++............ ....++..++ ..
T Consensus 9 ~k~ilItGasggIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~ 86 (264)
T PRK07576 9 GKNVVVVGGTSGINLGIAQAFARAGA--NVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGP 86 (264)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 45899999999999999999998887 8999998752 2222333322111111111 1111222222 35
Q ss_pred CcEEEEcCCCCCCC---CCCHH---HHHHHHHHHHHHHHHHHhhh--CCCeEEEEecCCC
Q 018512 111 MDLVIIPAGVPRKP---GMTRD---DLFNINAGIVRTLCEGIAKC--CPNATVNLISNPV 162 (354)
Q Consensus 111 aDvVIi~ag~~~~~---g~~r~---d~~~~n~~~~~~i~~~i~~~--~p~a~viv~tNPv 162 (354)
.|+||+.+|..... ..+.. ..+..|+.....+.+.+... .+++.|+++|.+.
T Consensus 87 iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~ 146 (264)
T PRK07576 87 IDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQ 146 (264)
T ss_pred CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChh
Confidence 79999998753211 12222 23456666555555554432 1346677776543
No 166
>PRK06482 short chain dehydrogenase; Provisional
Probab=97.37 E-value=0.0043 Score=57.81 Aligned_cols=111 Identities=13% Similarity=0.051 Sum_probs=64.2
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEe-CCCc---HHhh-------hCCC
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQ---LENA-------LTGM 111 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~a-------l~~a 111 (354)
++|.|+||+|++|+.++..|+..|. .|++++++... ..++.... ...+..+. +-+| +.++ +.+.
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~--~v~~~~r~~~~--~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 77 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGD--RVAATVRRPDA--LDDLKARY-GDRLWVLQLDVTDSAAVRAVVDRAFAALGRI 77 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC--EEEEEeCCHHH--HHHHHHhc-cCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4799999999999999999999887 88888886411 11121110 01111111 1122 1222 3457
Q ss_pred cEEEEcCCCCCCCC---CCH---HHHHHHHHHHHHHHHHHH----hhhCCCeEEEEec
Q 018512 112 DLVIIPAGVPRKPG---MTR---DDLFNINAGIVRTLCEGI----AKCCPNATVNLIS 159 (354)
Q Consensus 112 DvVIi~ag~~~~~g---~~r---~d~~~~n~~~~~~i~~~i----~~~~p~a~viv~t 159 (354)
|+||+++|...... .+. ...+..|+.....+.+.+ ++.+. +.++++|
T Consensus 78 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~-~~iv~~s 134 (276)
T PRK06482 78 DVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGG-GRIVQVS 134 (276)
T ss_pred CEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC-CEEEEEc
Confidence 99999998653221 112 234556777777777775 43333 4455554
No 167
>PRK07806 short chain dehydrogenase; Provisional
Probab=97.37 E-value=0.0013 Score=60.04 Aligned_cols=114 Identities=17% Similarity=0.219 Sum_probs=66.1
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc---hhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh------
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTGAVVRGFL-GQPQ---LENAL------ 108 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~---~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al------ 108 (354)
.++|.|+||+|++|.+++..|+..|. +|++++++.. .....++.... ..+..+. +-++ ...++
T Consensus 6 ~k~vlItGasggiG~~l~~~l~~~G~--~V~~~~r~~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (248)
T PRK07806 6 GKTALVTGSSRGIGADTAKILAGAGA--HVVVNYRQKAPRANKVVAEIEAAG--GRASAVGADLTDEESVAALMDTAREE 81 (248)
T ss_pred CcEEEEECCCCcHHHHHHHHHHHCCC--EEEEEeCCchHhHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHHh
Confidence 35899999999999999999998887 8888887641 12222333221 1121111 1122 22222
Q ss_pred -CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEec
Q 018512 109 -TGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLIS 159 (354)
Q Consensus 109 -~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~t 159 (354)
.+.|+||+.+|..........+.+..|+.....+++.+.++. ..+.++++|
T Consensus 82 ~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~is 134 (248)
T PRK07806 82 FGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVT 134 (248)
T ss_pred CCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEe
Confidence 368999998875422222222334556666666777776654 245555554
No 168
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=97.37 E-value=0.0013 Score=60.71 Aligned_cols=114 Identities=17% Similarity=0.097 Sum_probs=66.0
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCe-EEE-EeC-CCcHHhhh-CCCcEEEE
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAV-VRG-FLG-QPQLENAL-TGMDLVII 116 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~-v~~-~~~-~~d~~~al-~~aDvVIi 116 (354)
.++||+|+||+|++|+.++..|+..++ +|+++.++....... +.... ... +.. ... ..++.+++ .++|+||+
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~-~~~~~-~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~ 91 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKGF--AVKAGVRDVDKAKTS-LPQDP-SLQIVRADVTEGSDKLVEAIGDDSDAVIC 91 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCCC--EEEEEecCHHHHHHh-cccCC-ceEEEEeeCCCCHHHHHHHhhcCCCEEEE
Confidence 357999999999999999999998887 788777654211111 11110 111 111 111 12344566 68999999
Q ss_pred cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecC
Q 018512 117 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN 160 (354)
Q Consensus 117 ~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tN 160 (354)
++|.....+. .+.+..|......+++.+.+....-+|++.|.
T Consensus 92 ~~g~~~~~~~--~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~ 133 (251)
T PLN00141 92 ATGFRRSFDP--FAPWKVDNFGTVNLVEACRKAGVTRFILVSSI 133 (251)
T ss_pred CCCCCcCCCC--CCceeeehHHHHHHHHHHHHcCCCEEEEEccc
Confidence 8775422111 11123455556777777776655544444444
No 169
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=97.37 E-value=0.0023 Score=58.65 Aligned_cols=34 Identities=15% Similarity=0.123 Sum_probs=31.3
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 78 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~ 78 (354)
|+|.|+||+|.+|..++..|+..|. +|+++|+++
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~--~V~~~~r~~ 34 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGH--KVIATGRRQ 34 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC--EEEEEECCH
Confidence 6899999999999999999999887 899999875
No 170
>PRK12827 short chain dehydrogenase; Provisional
Probab=97.36 E-value=0.0063 Score=55.27 Aligned_cols=102 Identities=20% Similarity=0.329 Sum_probs=61.5
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chh----HHHHHhcCCCCCeEEEEe-CCCc---HHhhh---
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPG----VTADISHMDTGAVVRGFL-GQPQ---LENAL--- 108 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g----~~~dl~~~~~~~~v~~~~-~~~d---~~~al--- 108 (354)
.++|.|+||+|.+|+.++..|+..|. ++++++... ... ...++.... ..+..+. +-.+ +++++
T Consensus 6 ~~~ilItGasg~iG~~la~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~ 81 (249)
T PRK12827 6 SRRVLITGGSGGLGRAIAVRLAADGA--DVIVLDIHPMRGRAEADAVAAGIEAAG--GKALGLAFDVRDFAATRAALDAG 81 (249)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC--eEEEEcCcccccHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHH
Confidence 46899999999999999999999887 889988643 111 112222211 1122211 1112 22222
Q ss_pred ----CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHh
Q 018512 109 ----TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIA 147 (354)
Q Consensus 109 ----~~aDvVIi~ag~~~~~---g~~r---~d~~~~n~~~~~~i~~~i~ 147 (354)
...|.||+++|..... ..+. ...+..|......+++.+.
T Consensus 82 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 130 (249)
T PRK12827 82 VEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAAL 130 (249)
T ss_pred HHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHH
Confidence 4689999999865321 1122 2345678777777777766
No 171
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=97.35 E-value=0.001 Score=62.78 Aligned_cols=65 Identities=22% Similarity=0.250 Sum_probs=45.2
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 118 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a 118 (354)
|||+|||. |.+|..++..|...|+ +|.++|+++.. ...+..... +.. .+++. +++++||+||++.
T Consensus 1 m~I~IIG~-G~mG~sla~~L~~~g~--~V~~~d~~~~~--~~~a~~~g~---~~~--~~~~~-~~~~~aDlVilav 65 (279)
T PRK07417 1 MKIGIVGL-GLIGGSLGLDLRSLGH--TVYGVSRREST--CERAIERGL---VDE--ASTDL-SLLKDCDLVILAL 65 (279)
T ss_pred CeEEEEee-cHHHHHHHHHHHHCCC--EEEEEECCHHH--HHHHHHCCC---ccc--ccCCH-hHhcCCCEEEEcC
Confidence 68999998 9999999999998887 89999987521 111111111 111 12343 5689999999984
No 172
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.35 E-value=0.0052 Score=55.82 Aligned_cols=116 Identities=17% Similarity=0.235 Sum_probs=65.5
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEeC-CC---cHHhhh-------
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLG-QP---QLENAL------- 108 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~~-~~---d~~~al------- 108 (354)
.+++.|+||+|.+|..++..|+..|. +|++++++.. .....++.... ..+..+.. -+ ++.+++
T Consensus 7 ~~~vlVtG~sg~iG~~l~~~L~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (239)
T PRK07666 7 GKNALITGAGRGIGRAVAIALAKEGV--NVGLLARTEENLKAVAEEVEAYG--VKVVIATADVSDYEEVTAAIEQLKNEL 82 (239)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhC--CeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 35899999999999999999999887 8999998752 22223333221 22222211 11 222333
Q ss_pred CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecCC
Q 018512 109 TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISNP 161 (354)
Q Consensus 109 ~~aDvVIi~ag~~~~~---g~~r---~d~~~~n~~~~~~i~~~i~~~---~p~a~viv~tNP 161 (354)
.+.|+||+++|..... ..+. ...+..|+.....+.+.+..+ ...+.++++|..
T Consensus 83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~ 144 (239)
T PRK07666 83 GSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISST 144 (239)
T ss_pred CCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcch
Confidence 3799999998864321 1122 233455665444444444332 123445555543
No 173
>PRK07069 short chain dehydrogenase; Validated
Probab=97.35 E-value=0.0099 Score=54.17 Aligned_cols=114 Identities=23% Similarity=0.291 Sum_probs=66.9
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecC-C--chhHHHHHhcCCCCCeE---EE-EeCCCcHH-------hhhC
Q 018512 44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV-N--TPGVTADISHMDTGAVV---RG-FLGQPQLE-------NALT 109 (354)
Q Consensus 44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~-~--~~g~~~dl~~~~~~~~v---~~-~~~~~d~~-------~al~ 109 (354)
||+|+||+|.+|.+++..|+..|. +|++.|++ . ......++........+ .. +.....+. +.+.
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 78 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGA--KVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMG 78 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence 589999999999999999999887 89999987 3 22222333322111111 11 11111111 2235
Q ss_pred CCcEEEEcCCCCCCC---CCCH---HHHHHHHHH----HHHHHHHHHhhhCCCeEEEEecC
Q 018512 110 GMDLVIIPAGVPRKP---GMTR---DDLFNINAG----IVRTLCEGIAKCCPNATVNLISN 160 (354)
Q Consensus 110 ~aDvVIi~ag~~~~~---g~~r---~d~~~~n~~----~~~~i~~~i~~~~p~a~viv~tN 160 (354)
..|+||+.+|..... ..+. ...+..|+. ..+.+.+.+++... +.|+++|.
T Consensus 79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-~~ii~~ss 138 (251)
T PRK07069 79 GLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQP-ASIVNISS 138 (251)
T ss_pred CccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCC-cEEEEecC
Confidence 689999999865321 1122 233456665 77788888876544 44555553
No 174
>PRK06172 short chain dehydrogenase; Provisional
Probab=97.34 E-value=0.0031 Score=57.86 Aligned_cols=155 Identities=12% Similarity=0.075 Sum_probs=82.7
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCC---cHHhhhC------
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQP---QLENALT------ 109 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~---d~~~al~------ 109 (354)
.++|+|+||+|.+|..++..|+..|. +|++++++. ......++.... ..+..+. +-+ ++.++++
T Consensus 7 ~k~ilItGas~~iG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~ 82 (253)
T PRK06172 7 GKVALVTGGAAGIGRATALAFAREGA--KVVVADRDAAGGEETVALIREAG--GEALFVACDVTRDAEVKALVEQTIAAY 82 (253)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 35899999999999999999998887 899999876 222233343322 1222211 111 2223333
Q ss_pred -CCcEEEEcCCCCCCC----CCCHH---HHHHHHHHHHHHHH----HHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhC
Q 018512 110 -GMDLVIIPAGVPRKP----GMTRD---DLFNINAGIVRTLC----EGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAG 177 (354)
Q Consensus 110 -~aDvVIi~ag~~~~~----g~~r~---d~~~~n~~~~~~i~----~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~ 177 (354)
..|+||+.+|..... ..+.. +.+.-|+.....+. +.+.+. ..+.++++|......
T Consensus 83 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~~sS~~~~~------------ 149 (253)
T PRK06172 83 GRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQ-GGGAIVNTASVAGLG------------ 149 (253)
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEECchhhcc------------
Confidence 459999999864321 12222 23455655554433 344333 234556565422111
Q ss_pred CCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512 178 TYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV 215 (354)
Q Consensus 178 ~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~ 215 (354)
+.+..-.++.+......+.+.++..+. +..+++..+
T Consensus 150 ~~~~~~~Y~~sKaa~~~~~~~la~e~~--~~~i~v~~i 185 (253)
T PRK06172 150 AAPKMSIYAASKHAVIGLTKSAAIEYA--KKGIRVNAV 185 (253)
T ss_pred CCCCCchhHHHHHHHHHHHHHHHHHhc--ccCeEEEEE
Confidence 233223344443333456666777663 445555444
No 175
>PRK09135 pteridine reductase; Provisional
Probab=97.34 E-value=0.0051 Score=55.87 Aligned_cols=147 Identities=15% Similarity=0.112 Sum_probs=81.6
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC---chhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh-------
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL------- 108 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~---~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al------- 108 (354)
++|.|+||+|++|++++..|+..|. +|+++|+.. ......++.+... ..+..+. +-++ ...++
T Consensus 7 ~~vlItGa~g~iG~~l~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 83 (249)
T PRK09135 7 KVALITGGARRIGAAIARTLHAAGY--RVAIHYHRSAAEADALAAELNALRP-GSAAALQADLLDPDALPELVAACVAAF 83 (249)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhhcC-CceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 5899999999999999999999887 899999754 2222233333211 1111111 1122 22233
Q ss_pred CCCcEEEEcCCCCCC--CC-CC---HHHHHHHHHHHHHHHHHHHhhhC--CCeEEEEecCCCCCchHHHHHHHHHhCCCC
Q 018512 109 TGMDLVIIPAGVPRK--PG-MT---RDDLFNINAGIVRTLCEGIAKCC--PNATVNLISNPVNSTVPIAAEVFKKAGTYD 180 (354)
Q Consensus 109 ~~aDvVIi~ag~~~~--~g-~~---r~d~~~~n~~~~~~i~~~i~~~~--p~a~viv~tNPv~~~~~~~~~~~~~~~~~p 180 (354)
.+.|+||+++|.... .. .+ ..+.+..|+.....+.+.+.++- ..+.++..+. . .....++
T Consensus 84 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~----~--------~~~~~~~ 151 (249)
T PRK09135 84 GRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITD----I--------HAERPLK 151 (249)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeC----h--------hhcCCCC
Confidence 357999999885321 11 11 24456678877777777765432 1344443332 1 0111334
Q ss_pred CCCEEEeccchHHHHHHHHHHHhC
Q 018512 181 PKKLLGVTMLDVVRANTFVAEVLG 204 (354)
Q Consensus 181 ~~kviG~t~ld~~r~~~~la~~l~ 204 (354)
+.-.++.+......+-..+++.++
T Consensus 152 ~~~~Y~~sK~~~~~~~~~l~~~~~ 175 (249)
T PRK09135 152 GYPVYCAAKAALEMLTRSLALELA 175 (249)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHC
Confidence 444555554444455566666653
No 176
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=97.34 E-value=0.002 Score=59.32 Aligned_cols=145 Identities=17% Similarity=0.151 Sum_probs=80.7
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEE-EeCCCcHHhh-------hCCCc
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRG-FLGQPQLENA-------LTGMD 112 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~-~~~~~d~~~a-------l~~aD 112 (354)
.++.|+||+|.+|..++..|+..|. +|+++|++.. .....++.... ..+.. .....+.+++ +...|
T Consensus 7 ~~vlItGas~~iG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~D~~~~~~~~~~~~~~~~~~~~id 82 (257)
T PRK07067 7 KVALLTGAASGIGEAVAERYLAEGA--RVVIADIKPARARLAALEIGPAA--IAVSLDVTRQDSIDRIVAAAVERFGGID 82 (257)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCC--EEEEEcCCHHHHHHHHHHhCCce--EEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 4799999999999999999999988 8999998762 12222222110 01111 1111122222 24689
Q ss_pred EEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhh----CCCeEEEEecCCCCCchHHHHHHHHHhCCCCCC
Q 018512 113 LVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKC----CPNATVNLISNPVNSTVPIAAEVFKKAGTYDPK 182 (354)
Q Consensus 113 vVIi~ag~~~~~---g~~---r~d~~~~n~~~~~~i~~~i~~~----~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~ 182 (354)
++|+++|..... ..+ ....+..|+.....+.+.+.++ ...+.|+++|...... +.|+.
T Consensus 83 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~------------~~~~~ 150 (257)
T PRK07067 83 ILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRR------------GEALV 150 (257)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCC------------CCCCC
Confidence 999998864211 111 2334567776666666665433 2345666665432111 23333
Q ss_pred CEEEeccchHHHHHHHHHHHh
Q 018512 183 KLLGVTMLDVVRANTFVAEVL 203 (354)
Q Consensus 183 kviG~t~ld~~r~~~~la~~l 203 (354)
-.++.+......+.+.++..+
T Consensus 151 ~~Y~~sK~a~~~~~~~la~e~ 171 (257)
T PRK07067 151 SHYCATKAAVISYTQSAALAL 171 (257)
T ss_pred chhhhhHHHHHHHHHHHHHHh
Confidence 445554433344566666655
No 177
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=97.33 E-value=0.01 Score=54.17 Aligned_cols=116 Identities=17% Similarity=0.228 Sum_probs=66.6
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEE-eCCCc---HH-------hhhC
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGF-LGQPQ---LE-------NALT 109 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~-~~~~d---~~-------~al~ 109 (354)
+.++|.|+||+|.+|.+++..|+..|. +|++++++........+.... ..+..+ .+-++ +. +.+.
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~--~vi~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGA--DIVGAGRSEPSETQQQVEALG--RRFLSLTADLSDIEAIKALVDSAVEEFG 79 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEcCchHHHHHHHHHhcC--CceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 346899999999999999999999987 899999865322222233221 112111 11112 21 2234
Q ss_pred CCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHh----hhCCCeEEEEecC
Q 018512 110 GMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEGIA----KCCPNATVNLISN 160 (354)
Q Consensus 110 ~aDvVIi~ag~~~~~g---~~---r~d~~~~n~~~~~~i~~~i~----~~~p~a~viv~tN 160 (354)
..|++|+++|...... .+ ..+.+..|+.....+.+.+. +....+.++++|.
T Consensus 80 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS 140 (248)
T TIGR01832 80 HIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIAS 140 (248)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 6899999998643211 11 22345566655555555443 3333456666553
No 178
>PRK05875 short chain dehydrogenase; Provisional
Probab=97.33 E-value=0.0053 Score=57.12 Aligned_cols=159 Identities=18% Similarity=0.115 Sum_probs=85.2
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCc---HHhhhC------
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENALT------ 109 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al~------ 109 (354)
.++|.|+||+|.+|+.++..|+..|. +|++++++. ......++........+..+. +-.+ ....++
T Consensus 7 ~k~vlItGasg~IG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (276)
T PRK05875 7 DRTYLVTGGGSGIGKGVAAGLVAAGA--AVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWH 84 (276)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 46899999999999999999999988 899999875 222233333221111222211 1112 222333
Q ss_pred -CCcEEEEcCCCCCCC----CCCH---HHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecCCCCCchHHHHHHHHHhCC
Q 018512 110 -GMDLVIIPAGVPRKP----GMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISNPVNSTVPIAAEVFKKAGT 178 (354)
Q Consensus 110 -~aDvVIi~ag~~~~~----g~~r---~d~~~~n~~~~~~i~~~i~~~---~p~a~viv~tNPv~~~~~~~~~~~~~~~~ 178 (354)
..|+||+++|..... ..+. .+.+..|+.....+.+.+.+. ...+.++++|..... .+
T Consensus 85 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~------------~~ 152 (276)
T PRK05875 85 GRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAAS------------NT 152 (276)
T ss_pred CCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhc------------CC
Confidence 689999998854221 1122 233455666666665544333 234566666532110 11
Q ss_pred CCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEEe
Q 018512 179 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG 216 (354)
Q Consensus 179 ~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~G 216 (354)
.|..-.++.+......+.+.+++.++ +..+++.++.
T Consensus 153 ~~~~~~Y~~sK~a~~~~~~~~~~~~~--~~~i~v~~i~ 188 (276)
T PRK05875 153 HRWFGAYGVTKSAVDHLMKLAADELG--PSWVRVNSIR 188 (276)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHhc--ccCeEEEEEe
Confidence 22222344444444456666666654 3455555443
No 179
>PRK08278 short chain dehydrogenase; Provisional
Probab=97.33 E-value=0.0087 Score=55.87 Aligned_cols=160 Identities=16% Similarity=0.182 Sum_probs=86.7
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc---------hhHHHHHhcCCCCCe-EEE-EeCCCcHHhhh--
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---------PGVTADISHMDTGAV-VRG-FLGQPQLENAL-- 108 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~---------~g~~~dl~~~~~~~~-v~~-~~~~~d~~~al-- 108 (354)
.+++.|+||+|.+|..++..|+..|. +|++++++.. +....++........ +.. .....+.+..+
T Consensus 6 ~k~vlItGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~ 83 (273)
T PRK08278 6 GKTLFITGASRGIGLAIALRAARDGA--NIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAK 83 (273)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHH
Confidence 35899999999999999999999887 8999998641 111222322111111 111 11111222223
Q ss_pred -----CCCcEEEEcCCCCCCC---CCCHH---HHHHHHHHHHHHHHHHHhhh---CCCeEEEEecCCCCCchHHHHHHHH
Q 018512 109 -----TGMDLVIIPAGVPRKP---GMTRD---DLFNINAGIVRTLCEGIAKC---CPNATVNLISNPVNSTVPIAAEVFK 174 (354)
Q Consensus 109 -----~~aDvVIi~ag~~~~~---g~~r~---d~~~~n~~~~~~i~~~i~~~---~p~a~viv~tNPv~~~~~~~~~~~~ 174 (354)
...|+||+++|..... ..+.. ..+..|+.....+++.+..+ ...+.++++|.+....
T Consensus 84 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~--------- 154 (273)
T PRK08278 84 AVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLD--------- 154 (273)
T ss_pred HHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhcc---------
Confidence 3689999999864211 12222 23445655555555554432 2346666666433211
Q ss_pred HhCCCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512 175 KAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV 215 (354)
Q Consensus 175 ~~~~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~ 215 (354)
...++..-.++.+.....++...+++.++ +..|++..+
T Consensus 155 -~~~~~~~~~Y~~sK~a~~~~~~~la~el~--~~~I~v~~i 192 (273)
T PRK08278 155 -PKWFAPHTAYTMAKYGMSLCTLGLAEEFR--DDGIAVNAL 192 (273)
T ss_pred -ccccCCcchhHHHHHHHHHHHHHHHHHhh--hcCcEEEEE
Confidence 01123334566665555667777777775 344554444
No 180
>PRK12828 short chain dehydrogenase; Provisional
Probab=97.32 E-value=0.0024 Score=57.56 Aligned_cols=117 Identities=15% Similarity=0.135 Sum_probs=65.1
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEE-EeCCCcHHhh-------hCC
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRG-FLGQPQLENA-------LTG 110 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~-~~~~~d~~~a-------l~~ 110 (354)
+.++|+|+||+|.+|+.++..|+..|. +|+++|++.. .....++..... ..+.. .....+++++ +..
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGA--RVALIGRGAAPLSQTLPGVPADAL-RIGGIDLVDPQAARRAVDEVNRQFGR 82 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCC--eEEEEeCChHhHHHHHHHHhhcCc-eEEEeecCCHHHHHHHHHHHHHHhCC
Confidence 346899999999999999999999887 8999999762 122233332211 11111 1111122222 236
Q ss_pred CcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecC
Q 018512 111 MDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISN 160 (354)
Q Consensus 111 aDvVIi~ag~~~~~---g~~r---~d~~~~n~~~~~~i~~~i~~~---~p~a~viv~tN 160 (354)
.|+||+.+|..... ..+. .+.+..|......+++.+.+. .+...++++|.
T Consensus 83 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS 141 (239)
T PRK12828 83 LDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGA 141 (239)
T ss_pred cCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECc
Confidence 89999998754211 1122 223445655555555554322 23445555553
No 181
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=97.31 E-value=0.0025 Score=58.56 Aligned_cols=120 Identities=13% Similarity=0.103 Sum_probs=67.9
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCe-EEE-EeCCCcHHhhh-------
Q 018512 40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAV-VRG-FLGQPQLENAL------- 108 (354)
Q Consensus 40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~-v~~-~~~~~d~~~al------- 108 (354)
.+.++|.|+||+|.+|+.++..|+..|. .|+++|+++ ......++........ +.. .....++..++
T Consensus 9 ~~~k~ilItGas~~IG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 86 (256)
T PRK06124 9 LAGQVALVTGSARGLGFEIARALAGAGA--HVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEH 86 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence 4456899999999999999999998887 899999975 2223333432211111 111 11111222222
Q ss_pred CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecCC
Q 018512 109 TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISNP 161 (354)
Q Consensus 109 ~~aDvVIi~ag~~~~~---g~~r---~d~~~~n~~~~~~i~~~i~~~---~p~a~viv~tNP 161 (354)
...|.||+++|..... ..+. ...+..|+.....+++.+.+. ...+.++++|..
T Consensus 87 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~ 148 (256)
T PRK06124 87 GRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSI 148 (256)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeec
Confidence 3458999998864321 1122 234566766555555444332 234556666654
No 182
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=97.30 E-value=0.003 Score=60.63 Aligned_cols=113 Identities=12% Similarity=0.031 Sum_probs=71.3
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhH-----HHHHhcCC-----CC-CeEEEEeCC----------C
Q 018512 44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV-----TADISHMD-----TG-AVVRGFLGQ----------P 102 (354)
Q Consensus 44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~-----~~dl~~~~-----~~-~~v~~~~~~----------~ 102 (354)
+|.|+||+|++|++++..|+..+...+|+++.+...... ...+.... .. ..+..+.+. .
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~ 80 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA 80 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence 589999999999999999998875447888887652111 11111100 00 223332111 1
Q ss_pred cHHhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEE
Q 018512 103 QLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNL 157 (354)
Q Consensus 103 d~~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv 157 (354)
++.+..+++|+||++|+.... .....++...|+....++++.+.+...+.++.+
T Consensus 81 ~~~~~~~~~d~vih~a~~~~~-~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~i 134 (367)
T TIGR01746 81 EWERLAENVDTIVHNGALVNW-VYPYSELRAANVLGTREVLRLAASGRAKPLHYV 134 (367)
T ss_pred HHHHHHhhCCEEEeCCcEecc-CCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEE
Confidence 234556899999999875432 223455667899999999998887665544443
No 183
>PLN02996 fatty acyl-CoA reductase
Probab=97.30 E-value=0.005 Score=62.92 Aligned_cols=117 Identities=15% Similarity=0.115 Sum_probs=72.0
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhC-CCCcEEEEEecCCc--hh--H-HHHHhcC----------C--C----CCeEEEEe
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVNT--PG--V-TADISHM----------D--T----GAVVRGFL 99 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~-~~~~ei~L~D~~~~--~g--~-~~dl~~~----------~--~----~~~v~~~~ 99 (354)
.+.|.|+||+|++|+.++..|+.. +...+|+++.+... .. . ..++... . . ..++..+.
T Consensus 11 ~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~i~ 90 (491)
T PLN02996 11 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPVP 90 (491)
T ss_pred CCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEEEe
Confidence 358999999999999999987764 34557777776541 11 0 0111110 0 0 02233322
Q ss_pred CC----------Cc-HHhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEec
Q 018512 100 GQ----------PQ-LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLIS 159 (354)
Q Consensus 100 ~~----------~d-~~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~t 159 (354)
+. .+ +++.++++|+||++|+...- .....+....|+....++++.+++.. .+.+|.+.|
T Consensus 91 GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST 161 (491)
T PLN02996 91 GDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNF-DERYDVALGINTLGALNVLNFAKKCVKVKMLLHVST 161 (491)
T ss_pred cccCCcCCCCChHHHHHHHHhCCCEEEECccccCC-cCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEee
Confidence 11 11 34567899999999876532 23445667889999999999888753 344555444
No 184
>PRK07832 short chain dehydrogenase; Provisional
Probab=97.30 E-value=0.019 Score=53.45 Aligned_cols=118 Identities=19% Similarity=0.176 Sum_probs=66.2
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEeCCCcH----------HhhhCC
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQL----------ENALTG 110 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~~~d~----------~~al~~ 110 (354)
+++.|+||+|.+|..++..|+..|. .|++++++. ......++.............+-.+. .+.+..
T Consensus 1 k~vlItGas~giG~~la~~la~~G~--~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 78 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGA--ELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGS 78 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence 4799999999999999999998887 799999875 22223333322111111000011121 122356
Q ss_pred CcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHH----hhhCCCeEEEEecCCC
Q 018512 111 MDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGI----AKCCPNATVNLISNPV 162 (354)
Q Consensus 111 aDvVIi~ag~~~~~---g~~r---~d~~~~n~~~~~~i~~~i----~~~~p~a~viv~tNPv 162 (354)
.|+||+++|..... ..+. ...+..|+.....+.+.+ .+....+.|+++|...
T Consensus 79 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~ 140 (272)
T PRK07832 79 MDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAA 140 (272)
T ss_pred CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEcccc
Confidence 89999999864221 1222 234556666555555544 3333345666666443
No 185
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=97.29 E-value=0.0037 Score=57.03 Aligned_cols=115 Identities=17% Similarity=0.211 Sum_probs=65.6
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh-------
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL------- 108 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al------- 108 (354)
.++|.|+||+|++|+.++..|+..+. +|+++|++. ......++.... ..+..+. +-.+ .++++
T Consensus 3 ~~~ilItGas~~iG~~la~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~ 78 (250)
T TIGR03206 3 DKTAIVTGGGGGIGGATCRRFAEEGA--KVAVFDLNREAAEKVAADIRAKG--GNAQAFACDITDRDSVDTAVAAAEQAL 78 (250)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC--EEEEecCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 45899999999999999999999887 899999876 222223333321 1122111 1112 22222
Q ss_pred CCCcEEEEcCCCCCCCC---CCH---HHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecC
Q 018512 109 TGMDLVIIPAGVPRKPG---MTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISN 160 (354)
Q Consensus 109 ~~aDvVIi~ag~~~~~g---~~r---~d~~~~n~~~~~~i~~~i~~~---~p~a~viv~tN 160 (354)
...|+||+.+|...... .+. ...+..|+.....+.+.+.+. .+.+.+++++.
T Consensus 79 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss 139 (250)
T TIGR03206 79 GPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIAS 139 (250)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECc
Confidence 35899999988542211 122 223566766666555554321 22344555543
No 186
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=97.29 E-value=0.0071 Score=55.27 Aligned_cols=118 Identities=17% Similarity=0.204 Sum_probs=67.6
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCC-CCeEEEEeCC-Cc----------HHh
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT-GAVVRGFLGQ-PQ----------LEN 106 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~-~~~v~~~~~~-~d----------~~~ 106 (354)
+.++|.|+||+|++|.+++..|+..|. +|+++|++. ......++.+... ...+.....+ .+ +.+
T Consensus 11 ~~k~vlItG~~g~iG~~la~~l~~~G~--~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 88 (247)
T PRK08945 11 KDRIILVTGAGDGIGREAALTYARHGA--TVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE 88 (247)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC--cEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence 456899999999999999999998887 899999976 2233344443321 1111111100 01 223
Q ss_pred hhCCCcEEEEcCCCCCCC----CCCH---HHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecC
Q 018512 107 ALTGMDLVIIPAGVPRKP----GMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISN 160 (354)
Q Consensus 107 al~~aDvVIi~ag~~~~~----g~~r---~d~~~~n~~~~~~i~~~i~~~---~p~a~viv~tN 160 (354)
.+...|+||+.||..... ..+. ...+..|+.....+.+.+..+ .+.+.|++.|.
T Consensus 89 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss 152 (247)
T PRK08945 89 QFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSS 152 (247)
T ss_pred HhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEcc
Confidence 345689999998863221 2222 234556666544444444322 23455555554
No 187
>PRK08265 short chain dehydrogenase; Provisional
Probab=97.28 E-value=0.0069 Score=56.07 Aligned_cols=112 Identities=15% Similarity=0.148 Sum_probs=63.8
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEE----eCCCcHHhh-------h
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGF----LGQPQLENA-------L 108 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~----~~~~d~~~a-------l 108 (354)
.+++.|+||+|.+|..++..|+..|. +|++.|++.. .....++. ..+..+ ....+.+++ +
T Consensus 6 ~k~vlItGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 78 (261)
T PRK08265 6 GKVAIVTGGATLIGAAVARALVAAGA--RVAIVDIDADNGAAVAASLG-----ERARFIATDITDDAAIERAVATVVARF 78 (261)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhC-----CeeEEEEecCCCHHHHHHHHHHHHHHh
Confidence 45899999999999999999999988 8999998752 11122221 111111 111122222 2
Q ss_pred CCCcEEEEcCCCCCCC--CCCH---HHHHHHHHHHHHHHHHHHhhh--CCCeEEEEecC
Q 018512 109 TGMDLVIIPAGVPRKP--GMTR---DDLFNINAGIVRTLCEGIAKC--CPNATVNLISN 160 (354)
Q Consensus 109 ~~aDvVIi~ag~~~~~--g~~r---~d~~~~n~~~~~~i~~~i~~~--~p~a~viv~tN 160 (354)
...|++|+.+|..... ..+. ...+..|+.....+.+.+..+ .+.+.|+++|.
T Consensus 79 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS 137 (261)
T PRK08265 79 GRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTS 137 (261)
T ss_pred CCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECc
Confidence 4679999998864322 1222 223445655444444443322 34566666653
No 188
>PRK06914 short chain dehydrogenase; Provisional
Probab=97.28 E-value=0.011 Score=55.07 Aligned_cols=114 Identities=11% Similarity=0.101 Sum_probs=63.0
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEe-CCCcHH---------hhhCC
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQLE---------NALTG 110 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~-~~~d~~---------~al~~ 110 (354)
+.+.|+||+|.+|+.++..|+..|. .|++++++.. .....++.+......+..+. +-+|.+ +.+..
T Consensus 4 k~~lItGasg~iG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~ 81 (280)
T PRK06914 4 KIAIVTGASSGFGLLTTLELAKKGY--LVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIGR 81 (280)
T ss_pred CEEEEECCCchHHHHHHHHHHhCCC--EEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcCC
Confidence 4689999999999999999999887 8999998652 22222222211111222211 112221 11245
Q ss_pred CcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHH----HhhhCCCeEEEEec
Q 018512 111 MDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEG----IAKCCPNATVNLIS 159 (354)
Q Consensus 111 aDvVIi~ag~~~~~---g~~r---~d~~~~n~~~~~~i~~~----i~~~~p~a~viv~t 159 (354)
.|+||+++|..... +.+. .+.+..|+.....+.+. +++.... .++++|
T Consensus 82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-~iv~vs 139 (280)
T PRK06914 82 IDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSG-KIINIS 139 (280)
T ss_pred eeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC-EEEEEC
Confidence 79999998864321 1111 23345666655455444 4544333 344444
No 189
>PRK06181 short chain dehydrogenase; Provisional
Probab=97.26 E-value=0.0042 Score=57.28 Aligned_cols=114 Identities=17% Similarity=0.182 Sum_probs=66.8
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh-------C
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------T 109 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al-------~ 109 (354)
++|.|+||+|.+|+.++..|+..+. +|+++|++.. +....++.... ..+..+. +-.| +.+++ .
T Consensus 2 ~~vlVtGasg~iG~~la~~l~~~g~--~Vi~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 77 (263)
T PRK06181 2 KVVIITGASEGIGRALAVRLARAGA--QLVLAARNETRLASLAQELADHG--GEALVVPTDVSDAEACERLIEAAVARFG 77 (263)
T ss_pred CEEEEecCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4799999999999999999998887 8999998752 22223343322 1222211 1122 12222 3
Q ss_pred CCcEEEEcCCCCCCCC---C-CH---HHHHHHHHHHHHHHHHHHhhhC--CCeEEEEecC
Q 018512 110 GMDLVIIPAGVPRKPG---M-TR---DDLFNINAGIVRTLCEGIAKCC--PNATVNLISN 160 (354)
Q Consensus 110 ~aDvVIi~ag~~~~~g---~-~r---~d~~~~n~~~~~~i~~~i~~~~--p~a~viv~tN 160 (354)
+.|+||+++|...... . +. ...+..|+.....+.+.+.++. ..+.++++|.
T Consensus 78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS 137 (263)
T PRK06181 78 GIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSS 137 (263)
T ss_pred CCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEec
Confidence 6899999988643211 1 21 2335667766666666654332 2345555554
No 190
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=97.26 E-value=0.0035 Score=56.88 Aligned_cols=114 Identities=19% Similarity=0.317 Sum_probs=64.1
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEeCCCc---HHh-------hhC
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLGQPQ---LEN-------ALT 109 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~~~~d---~~~-------al~ 109 (354)
.+++.|+||+|.+|+.++..|+..+. .|++.+.+.. .....++. ........ +-.+ +++ .+.
T Consensus 6 ~~~vlItGa~g~iG~~la~~l~~~g~--~v~~~~~~~~~~~~~~~~~~---~~~~~~~~-D~~~~~~~~~~~~~~~~~~~ 79 (245)
T PRK12936 6 GRKALVTGASGGIGEEIARLLHAQGA--IVGLHGTRVEKLEALAAELG---ERVKIFPA-NLSDRDEVKALGQKAEADLE 79 (245)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHhC---CceEEEEc-cCCCHHHHHHHHHHHHHHcC
Confidence 45899999999999999999999887 7888887642 21112221 11111111 1112 222 234
Q ss_pred CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecCC
Q 018512 110 GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISNP 161 (354)
Q Consensus 110 ~aDvVIi~ag~~~~~---g~~---r~d~~~~n~~~~~~i~~~i~~~---~p~a~viv~tNP 161 (354)
..|+||+++|..... ..+ ....+..|+.....+++.+.+. .+.+.++++|..
T Consensus 80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~ 140 (245)
T PRK12936 80 GVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSV 140 (245)
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCH
Confidence 689999999864321 111 2334556666655555544322 234556666643
No 191
>PRK12939 short chain dehydrogenase; Provisional
Probab=97.26 E-value=0.0046 Score=56.32 Aligned_cols=116 Identities=15% Similarity=0.219 Sum_probs=67.9
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh------
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENAL------ 108 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al------ 108 (354)
+.++|.|+||+|.+|+.++..|+..|. +|+++++++. .....++.... ..+..+. +-.+ +++.+
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~ 81 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGA--TVAFNDGLAAEARELAAALEAAG--GRAHAIAADLADPASVQRFFDAAAAA 81 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 346899999999999999999999887 8999988652 22233443221 1222211 1122 11222
Q ss_pred -CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecC
Q 018512 109 -TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISN 160 (354)
Q Consensus 109 -~~aDvVIi~ag~~~~~---g~~r---~d~~~~n~~~~~~i~~~i~~~---~p~a~viv~tN 160 (354)
.+.|+||+++|..... ..+. ...+..|+.....+.+.+.++ ...+.++++|.
T Consensus 82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS 143 (250)
T PRK12939 82 LGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLAS 143 (250)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECc
Confidence 5789999998864321 1122 223456666665665555433 22456666654
No 192
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=97.24 E-value=0.0076 Score=56.37 Aligned_cols=117 Identities=18% Similarity=0.194 Sum_probs=74.5
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEE----eCCCcHHh------
Q 018512 39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF----LGQPQLEN------ 106 (354)
Q Consensus 39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~----~~~~d~~~------ 106 (354)
..+.+.++|+||++.+|..+|..|+.+|. .|+|+.+++ +.....++.+.. ...+..+ +..++.+.
T Consensus 3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~--~liLvaR~~~kL~~la~~l~~~~-~v~v~vi~~DLs~~~~~~~l~~~l~ 79 (265)
T COG0300 3 PMKGKTALITGASSGIGAELAKQLARRGY--NLILVARREDKLEALAKELEDKT-GVEVEVIPADLSDPEALERLEDELK 79 (265)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCcHHHHHHHHHHHHHhh-CceEEEEECcCCChhHHHHHHHHHH
Confidence 34566899999999999999999999998 999999987 556666777543 1222221 11112211
Q ss_pred -hhCCCcEEEEcCCCCCCCC------CCHHHHHHHHHHHHHH----HHHHHhhhCCCeEEEEec
Q 018512 107 -ALTGMDLVIIPAGVPRKPG------MTRDDLFNINAGIVRT----LCEGIAKCCPNATVNLIS 159 (354)
Q Consensus 107 -al~~aDvVIi~ag~~~~~g------~~r~d~~~~n~~~~~~----i~~~i~~~~p~a~viv~t 159 (354)
..-..|+.|..||...-.. .+-.+++.-|+-.+.. +.+.|.+.. .+.||+++
T Consensus 80 ~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~-~G~IiNI~ 142 (265)
T COG0300 80 ERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERG-AGHIINIG 142 (265)
T ss_pred hcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEe
Confidence 1126899999999764221 1234566777655444 445555433 45666664
No 193
>PRK12746 short chain dehydrogenase; Provisional
Probab=97.23 E-value=0.011 Score=54.02 Aligned_cols=147 Identities=16% Similarity=0.146 Sum_probs=78.2
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEe-cCC--chhHHHHHhcCCCCCeEEEE-eCCCc---HHhhhC-----
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYD-VVN--TPGVTADISHMDTGAVVRGF-LGQPQ---LENALT----- 109 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D-~~~--~~g~~~dl~~~~~~~~v~~~-~~~~d---~~~al~----- 109 (354)
.++|.|+||+|.+|+.++..|+..|. ++.+.+ ++. ......++.... ..+..+ .+-.| ..++++
T Consensus 6 ~~~ilItGasg~iG~~la~~l~~~G~--~v~i~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~d~~~i~~~~~~~~~~ 81 (254)
T PRK12746 6 GKVALVTGASRGIGRAIAMRLANDGA--LVAIHYGRNKQAADETIREIESNG--GKAFLIEADLNSIDGVKKLVEQLKNE 81 (254)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhcC--CcEEEEEcCcCCHHHHHHHHHHHHHH
Confidence 36899999999999999999999887 776653 433 112222232111 111111 01122 222222
Q ss_pred --------CCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHH
Q 018512 110 --------GMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFK 174 (354)
Q Consensus 110 --------~aDvVIi~ag~~~~~g---~~---r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~ 174 (354)
+.|+||+++|...... .+ ....+..|+.....+.+.+.++. ..+.++++|.....
T Consensus 82 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~---------- 151 (254)
T PRK12746 82 LQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVR---------- 151 (254)
T ss_pred hccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhc----------
Confidence 6899999998643211 11 13345577777777777766543 23455555432111
Q ss_pred HhCCCCCCCEEEeccchHHHHHHHHHHHhC
Q 018512 175 KAGTYDPKKLLGVTMLDVVRANTFVAEVLG 204 (354)
Q Consensus 175 ~~~~~p~~kviG~t~ld~~r~~~~la~~l~ 204 (354)
.+.+..-.++.+......+.+.+++.++
T Consensus 152 --~~~~~~~~Y~~sK~a~~~~~~~~~~~~~ 179 (254)
T PRK12746 152 --LGFTGSIAYGLSKGALNTMTLPLAKHLG 179 (254)
T ss_pred --CCCCCCcchHhhHHHHHHHHHHHHHHHh
Confidence 1223333345544444445566666653
No 194
>PRK07856 short chain dehydrogenase; Provisional
Probab=97.22 E-value=0.005 Score=56.51 Aligned_cols=141 Identities=11% Similarity=0.081 Sum_probs=78.3
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEE----eCCCcHHhhh-------CC
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGF----LGQPQLENAL-------TG 110 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~----~~~~d~~~al-------~~ 110 (354)
.+++.|+||+|.+|..++..|+..|. +|+++|++... ... . ..+..+ ....+.++++ ..
T Consensus 6 ~k~~lItGas~gIG~~la~~l~~~g~--~v~~~~r~~~~----~~~--~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 75 (252)
T PRK07856 6 GRVVLVTGGTRGIGAGIARAFLAAGA--TVVVCGRRAPE----TVD--G--RPAEFHAADVRDPDQVAALVDAIVERHGR 75 (252)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCChhh----hhc--C--CceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 46899999999999999999999887 89999987522 011 1 111111 1111223333 34
Q ss_pred CcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhh----hCCCeEEEEecCCCCCchHHHHHHHHHhCCCC
Q 018512 111 MDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAK----CCPNATVNLISNPVNSTVPIAAEVFKKAGTYD 180 (354)
Q Consensus 111 aDvVIi~ag~~~~~---g~~---r~d~~~~n~~~~~~i~~~i~~----~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p 180 (354)
.|+||+++|..... ..+ ....+..|+.....+.+.+.+ ....+.+|++|.-.... +.|
T Consensus 76 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~------------~~~ 143 (252)
T PRK07856 76 LDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRR------------PSP 143 (252)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCC------------CCC
Confidence 59999999854211 111 223455666665555555443 22335666665432211 223
Q ss_pred CCCEEEeccchHHHHHHHHHHHhC
Q 018512 181 PKKLLGVTMLDVVRANTFVAEVLG 204 (354)
Q Consensus 181 ~~kviG~t~ld~~r~~~~la~~l~ 204 (354)
..-.++.+......+.+.++..++
T Consensus 144 ~~~~Y~~sK~a~~~l~~~la~e~~ 167 (252)
T PRK07856 144 GTAAYGAAKAGLLNLTRSLAVEWA 167 (252)
T ss_pred CCchhHHHHHHHHHHHHHHHHHhc
Confidence 333344444334456666777665
No 195
>PRK07890 short chain dehydrogenase; Provisional
Probab=97.22 E-value=0.0028 Score=58.21 Aligned_cols=115 Identities=16% Similarity=0.157 Sum_probs=66.8
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEe-CCCc---HHh-------hh
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LEN-------AL 108 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~-~~~d---~~~-------al 108 (354)
.++|.|+||+|.+|++++..|+.+|. +|+++|+++. .....++.... ..+..+. +-++ ++. .+
T Consensus 5 ~k~vlItGa~~~IG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (258)
T PRK07890 5 GKVVVVSGVGPGLGRTLAVRAARAGA--DVVLAARTAERLDEVAAEIDDLG--RRALAVPTDITDEDQCANLVALALERF 80 (258)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHHhC--CceEEEecCCCCHHHHHHHHHHHHHHc
Confidence 46899999999999999999999998 8999998762 22223333211 1111111 1112 211 23
Q ss_pred CCCcEEEEcCCCCCC--C--CCCH---HHHHHHHHHHHHHHHHHHhhhC--CCeEEEEecC
Q 018512 109 TGMDLVIIPAGVPRK--P--GMTR---DDLFNINAGIVRTLCEGIAKCC--PNATVNLISN 160 (354)
Q Consensus 109 ~~aDvVIi~ag~~~~--~--g~~r---~d~~~~n~~~~~~i~~~i~~~~--p~a~viv~tN 160 (354)
...|+||+.+|.... + ..+. ...+..|+.....+.+.+.++- ..+.||++|.
T Consensus 81 g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS 141 (258)
T PRK07890 81 GRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINS 141 (258)
T ss_pred CCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEec
Confidence 468999999986422 1 1222 2345566665666666655432 1245666654
No 196
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=97.22 E-value=0.0048 Score=55.71 Aligned_cols=115 Identities=17% Similarity=0.225 Sum_probs=66.9
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC---chhHHHHHhcCCCCCeEEEE--eCCCcHHhhh-------CCCc
Q 018512 45 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGF--LGQPQLENAL-------TGMD 112 (354)
Q Consensus 45 I~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~---~~g~~~dl~~~~~~~~v~~~--~~~~d~~~al-------~~aD 112 (354)
|.|+|++|.+|+.++..|+.+|. +|++++++. ......++.+.......... ....++.+++ ...|
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 78 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGA--KVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPID 78 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence 47899999999999999999887 899998764 12223334332211111111 1111222333 3469
Q ss_pred EEEEcCCCCCCC---CC---CHHHHHHHHHHHHHHHHHHHhhhC---CCeEEEEecCC
Q 018512 113 LVIIPAGVPRKP---GM---TRDDLFNINAGIVRTLCEGIAKCC---PNATVNLISNP 161 (354)
Q Consensus 113 vVIi~ag~~~~~---g~---~r~d~~~~n~~~~~~i~~~i~~~~---p~a~viv~tNP 161 (354)
+||+.+|..... +. .....+..|+.....+.+.+.++. ..+.++++|..
T Consensus 79 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~ 136 (239)
T TIGR01830 79 ILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSV 136 (239)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCc
Confidence 999998864321 11 123456678777777777766542 23456666543
No 197
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.22 E-value=0.016 Score=53.02 Aligned_cols=34 Identities=21% Similarity=0.232 Sum_probs=30.3
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 78 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~ 78 (354)
++|.|+||+|++|+.++..|+..|. +|+++|+..
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g~--~vi~~~r~~ 36 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAGF--DLAINDRPD 36 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC--EEEEEecCc
Confidence 4699999999999999999999887 899999754
No 198
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=97.21 E-value=0.0022 Score=61.37 Aligned_cols=68 Identities=26% Similarity=0.261 Sum_probs=47.2
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 118 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a 118 (354)
+||+|||+ |.+|..++..|...+...+|.++|+++.. ...+..... .... ..+.++++++||+||++.
T Consensus 7 ~~I~IIG~-G~mG~sla~~l~~~g~~~~V~~~dr~~~~--~~~a~~~g~--~~~~---~~~~~~~~~~aDvViiav 74 (307)
T PRK07502 7 DRVALIGI-GLIGSSLARAIRRLGLAGEIVGADRSAET--RARARELGL--GDRV---TTSAAEAVKGADLVILCV 74 (307)
T ss_pred cEEEEEee-CHHHHHHHHHHHhcCCCcEEEEEECCHHH--HHHHHhCCC--Ccee---cCCHHHHhcCCCEEEECC
Confidence 68999998 99999999999988865589999997521 111111111 1111 134567789999999985
No 199
>PRK06128 oxidoreductase; Provisional
Probab=97.21 E-value=0.0077 Score=57.10 Aligned_cols=116 Identities=22% Similarity=0.231 Sum_probs=69.2
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc----hhHHHHHhcCCCCCeEEEE-eCCCc---HHh------
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT----PGVTADISHMDTGAVVRGF-LGQPQ---LEN------ 106 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~----~g~~~dl~~~~~~~~v~~~-~~~~d---~~~------ 106 (354)
+.++|.|+||+|.+|..++..|+..|. +|++.+.+.. +.....+.... ..+..+ .+-.+ .++
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~--~V~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~ 129 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGA--DIALNYLPEEEQDAAEVVQLIQAEG--RKAVALPGDLKDEAFCRQLVERAV 129 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCC--EEEEEeCCcchHHHHHHHHHHHHcC--CeEEEEecCCCCHHHHHHHHHHHH
Confidence 346899999999999999999999887 7888776431 11222233221 111111 11112 122
Q ss_pred -hhCCCcEEEEcCCCCCCC----CCC---HHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecC
Q 018512 107 -ALTGMDLVIIPAGVPRKP----GMT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISN 160 (354)
Q Consensus 107 -al~~aDvVIi~ag~~~~~----g~~---r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tN 160 (354)
.+...|+||+.||..... ..+ ....+..|+.....+++.+.++. +.+.||++|.
T Consensus 130 ~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS 192 (300)
T PRK06128 130 KELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGS 192 (300)
T ss_pred HHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECC
Confidence 234789999999864211 122 23456778877777777776553 3456666654
No 200
>PRK06182 short chain dehydrogenase; Validated
Probab=97.19 E-value=0.0046 Score=57.54 Aligned_cols=113 Identities=13% Similarity=0.112 Sum_probs=65.4
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEE-EeCCCcHHhhhC-------CCcE
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENALT-------GMDL 113 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~~~d~~~al~-------~aDv 113 (354)
.++|.|+||+|.+|..++..|+..|. +|++.+++... ..++..... ..+.. +....+++++++ +.|+
T Consensus 3 ~k~vlItGasggiG~~la~~l~~~G~--~V~~~~r~~~~--l~~~~~~~~-~~~~~Dv~~~~~~~~~~~~~~~~~~~id~ 77 (273)
T PRK06182 3 KKVALVTGASSGIGKATARRLAAQGY--TVYGAARRVDK--MEDLASLGV-HPLSLDVTDEASIKAAVDTIIAEEGRIDV 77 (273)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHH--HHHHHhCCC-eEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence 45899999999999999999999887 89999987521 112221111 11111 111122333333 7899
Q ss_pred EEEcCCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecC
Q 018512 114 VIIPAGVPRKP---GMT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISN 160 (354)
Q Consensus 114 VIi~ag~~~~~---g~~---r~d~~~~n~~~----~~~i~~~i~~~~p~a~viv~tN 160 (354)
||+.+|..... ..+ ....+..|+.. ++.+.+.+++... +.|+++|.
T Consensus 78 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~-g~iv~isS 133 (273)
T PRK06182 78 LVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRS-GRIINISS 133 (273)
T ss_pred EEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCC-CEEEEEcc
Confidence 99999864321 111 22334455543 5666667765543 34555553
No 201
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=97.18 E-value=0.0039 Score=56.01 Aligned_cols=36 Identities=31% Similarity=0.348 Sum_probs=31.8
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecC
Q 018512 40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV 77 (354)
Q Consensus 40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~ 77 (354)
-+..||+|+|+ |.+|+.++..|+..|.. +|+|+|.+
T Consensus 19 L~~~~V~IvG~-GglGs~ia~~La~~Gvg-~i~lvD~D 54 (200)
T TIGR02354 19 LEQATVAICGL-GGLGSNVAINLARAGIG-KLILVDFD 54 (200)
T ss_pred HhCCcEEEECc-CHHHHHHHHHHHHcCCC-EEEEECCC
Confidence 34568999999 99999999999999874 89999998
No 202
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=97.17 E-value=0.0087 Score=55.09 Aligned_cols=118 Identities=14% Similarity=0.159 Sum_probs=70.5
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEE-eCCCc---HHhh-----
Q 018512 39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGF-LGQPQ---LENA----- 107 (354)
Q Consensus 39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~-~~~~d---~~~a----- 107 (354)
+.+.++|.|+||+|.+|++++..|+..|. +|+++|++.. .....++.... ..+..+ .+-+| +.++
T Consensus 9 ~~~~k~ilItGa~g~IG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~i~~~~--~~~~~~~~Dl~d~~~i~~~~~~~~ 84 (259)
T PRK08213 9 DLSGKTALVTGGSRGLGLQIAEALGEAGA--RVVLSARKAEELEEAAAHLEALG--IDALWIAADVADEADIERLAEETL 84 (259)
T ss_pred CcCCCEEEEECCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEEccCCCHHHHHHHHHHHH
Confidence 34456899999999999999999999887 8999998652 22222232211 111111 11122 2111
Q ss_pred --hCCCcEEEEcCCCCCCCC---C---CHHHHHHHHHHHHHHHHHHHhhh----CCCeEEEEecC
Q 018512 108 --LTGMDLVIIPAGVPRKPG---M---TRDDLFNINAGIVRTLCEGIAKC----CPNATVNLISN 160 (354)
Q Consensus 108 --l~~aDvVIi~ag~~~~~g---~---~r~d~~~~n~~~~~~i~~~i~~~----~p~a~viv~tN 160 (354)
+...|.||+++|...... . .....+..|+.....+.+.+.++ .+.+.++++|.
T Consensus 85 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS 149 (259)
T PRK08213 85 ERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVAS 149 (259)
T ss_pred HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECC
Confidence 246899999988632111 1 12344567888777777766554 23455666654
No 203
>PRK06701 short chain dehydrogenase; Provisional
Probab=97.17 E-value=0.0093 Score=56.38 Aligned_cols=118 Identities=13% Similarity=0.112 Sum_probs=71.3
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc---hhHHHHHhcCCCCCeEEEE-eCCCc---HHhhh---
Q 018512 39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTGAVVRGF-LGQPQ---LENAL--- 108 (354)
Q Consensus 39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~---~g~~~dl~~~~~~~~v~~~-~~~~d---~~~al--- 108 (354)
+.+.++|.|+||+|.+|++++..|+..|. +|++++++.. ......+.... ..+..+ .+-.+ +.+.+
T Consensus 43 ~~~~k~iLItGasggIG~~la~~l~~~G~--~V~l~~r~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~i 118 (290)
T PRK06701 43 KLKGKVALITGGDSGIGRAVAVLFAKEGA--DIAIVYLDEHEDANETKQRVEKEG--VKCLLIPGDVSDEAFCKDAVEET 118 (290)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHHhcC--CeEEEEEccCCCHHHHHHHHHHH
Confidence 34456899999999999999999999887 8999998752 12222232211 122221 11112 22222
Q ss_pred ----CCCcEEEEcCCCCCCC----CCC---HHHHHHHHHHHHHHHHHHHhhh-CCCeEEEEecC
Q 018512 109 ----TGMDLVIIPAGVPRKP----GMT---RDDLFNINAGIVRTLCEGIAKC-CPNATVNLISN 160 (354)
Q Consensus 109 ----~~aDvVIi~ag~~~~~----g~~---r~d~~~~n~~~~~~i~~~i~~~-~p~a~viv~tN 160 (354)
...|+||+.||..... ..+ ....+..|+.....+++.+.++ .+.+.+|++|.
T Consensus 119 ~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS 182 (290)
T PRK06701 119 VRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGS 182 (290)
T ss_pred HHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEec
Confidence 3579999998863211 122 2345677887777888777654 34456666654
No 204
>PRK07024 short chain dehydrogenase; Provisional
Probab=97.17 E-value=0.0041 Score=57.37 Aligned_cols=35 Identities=37% Similarity=0.350 Sum_probs=31.6
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 78 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~ 78 (354)
+++|.|+||+|.+|..++..|+..|. +|+++|++.
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~--~v~~~~r~~ 36 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGA--TLGLVARRT 36 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC--EEEEEeCCH
Confidence 35899999999999999999999887 899999875
No 205
>PRK06138 short chain dehydrogenase; Provisional
Probab=97.16 E-value=0.0046 Score=56.45 Aligned_cols=112 Identities=17% Similarity=0.142 Sum_probs=63.5
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh-------
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENAL------- 108 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al------- 108 (354)
.++++|+||+|.+|+.++..|+..|. +|++++++.. .....++. .. ..+..+. +-+| +.+++
T Consensus 5 ~k~~lItG~sg~iG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~-~~--~~~~~~~~D~~~~~~~~~~~~~i~~~~ 79 (252)
T PRK06138 5 GRVAIVTGAGSGIGRATAKLFAREGA--RVVVADRDAEAAERVAAAIA-AG--GRAFARQGDVGSAEAVEALVDFVAARW 79 (252)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCC--eEEEecCCHHHHHHHHHHHh-cC--CeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 45899999999999999999999887 8999998752 22222232 11 1122211 1122 22222
Q ss_pred CCCcEEEEcCCCCCCC---CCCHH---HHHHHHHHHHHH----HHHHHhhhCCCeEEEEec
Q 018512 109 TGMDLVIIPAGVPRKP---GMTRD---DLFNINAGIVRT----LCEGIAKCCPNATVNLIS 159 (354)
Q Consensus 109 ~~aDvVIi~ag~~~~~---g~~r~---d~~~~n~~~~~~----i~~~i~~~~p~a~viv~t 159 (354)
.+.|+||+++|..... ..+.. ..+..|+..... +.+.+++.. .+.|+++|
T Consensus 80 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~s 139 (252)
T PRK06138 80 GRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQG-GGSIVNTA 139 (252)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcC-CeEEEEEC
Confidence 3789999999864321 11222 234566555444 444444433 34555554
No 206
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=97.16 E-value=0.005 Score=56.03 Aligned_cols=113 Identities=19% Similarity=0.261 Sum_probs=65.2
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEeC-CCc---HHhhh-------
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLG-QPQ---LENAL------- 108 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~~-~~d---~~~al------- 108 (354)
.++|+|+||+|.+|..++..|+..|. +|++++++.. .....++.... ..+..+.. -.| +++.+
T Consensus 6 ~~~ilItGasg~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (251)
T PRK12826 6 GRVALVTGAARGIGRAIAVRLAADGA--EVIVVDICGDDAAATAELVEAAG--GKARARQVDVRDRAALKAAVAAGVEDF 81 (251)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 45899999999999999999999887 8999998751 22223333221 12222211 112 22323
Q ss_pred CCCcEEEEcCCCCCC-C--CCCH---HHHHHHHHHHHHHHHHHH----hhhCCCeEEEEec
Q 018512 109 TGMDLVIIPAGVPRK-P--GMTR---DDLFNINAGIVRTLCEGI----AKCCPNATVNLIS 159 (354)
Q Consensus 109 ~~aDvVIi~ag~~~~-~--g~~r---~d~~~~n~~~~~~i~~~i----~~~~p~a~viv~t 159 (354)
...|+||+++|.... + ..+. .+.+..|+.....+.+.+ .+..+ ..++++|
T Consensus 82 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~ii~~s 141 (251)
T PRK12826 82 GRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGG-GRIVLTS 141 (251)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC-cEEEEEe
Confidence 378999999876432 1 1222 234556666555555554 33333 3445444
No 207
>PRK09291 short chain dehydrogenase; Provisional
Probab=97.16 E-value=0.012 Score=53.81 Aligned_cols=115 Identities=15% Similarity=0.170 Sum_probs=63.2
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEE--EeCCCcHHhhhC-CCcEEEEc
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRG--FLGQPQLENALT-GMDLVIIP 117 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~--~~~~~d~~~al~-~aDvVIi~ 117 (354)
++|.|+||+|.+|+.++..|+..|. .|++.+++.. .....+.........+.. +....++..++. +.|+||++
T Consensus 3 ~~vlVtGasg~iG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~ 80 (257)
T PRK09291 3 KTILITGAGSGFGREVALRLARKGH--NVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNN 80 (257)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEEC
Confidence 3799999999999999999999887 8888887652 111111111111111111 111123344444 89999999
Q ss_pred CCCCCCC---CCCHH---HHHHHHHHH----HHHHHHHHhhhCCCeEEEEecC
Q 018512 118 AGVPRKP---GMTRD---DLFNINAGI----VRTLCEGIAKCCPNATVNLISN 160 (354)
Q Consensus 118 ag~~~~~---g~~r~---d~~~~n~~~----~~~i~~~i~~~~p~a~viv~tN 160 (354)
+|..... ..+.. ..+.-|+.. .+.+.+.+.+... +.|+++|.
T Consensus 81 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-~~iv~~SS 132 (257)
T PRK09291 81 AGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGK-GKVVFTSS 132 (257)
T ss_pred CCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC-ceEEEEcC
Confidence 9865321 11221 223345443 3344444444443 45666653
No 208
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=97.16 E-value=0.0038 Score=59.55 Aligned_cols=95 Identities=18% Similarity=0.188 Sum_probs=59.1
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCCCC
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPR 122 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~~~ 122 (354)
|||+|||. |.+|++++..|...++ +|.++|+++.. ...+..... .......++.+.++++|+||++...
T Consensus 1 M~Ig~IGl-G~mG~~la~~L~~~g~--~V~~~dr~~~~--~~~l~~~g~----~~~~s~~~~~~~~~~~dvIi~~vp~-- 69 (298)
T TIGR00872 1 MQLGLIGL-GRMGANIVRRLAKRGH--DCVGYDHDQDA--VKAMKEDRT----TGVANLRELSQRLSAPRVVWVMVPH-- 69 (298)
T ss_pred CEEEEEcc-hHHHHHHHHHHHHCCC--EEEEEECCHHH--HHHHHHcCC----cccCCHHHHHhhcCCCCEEEEEcCc--
Confidence 68999999 9999999999999887 89999997622 222222211 0111112334456789999998311
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCC
Q 018512 123 KPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPV 162 (354)
Q Consensus 123 ~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv 162 (354)
..++++++.+.... ++.+||..||..
T Consensus 70 --------------~~~~~v~~~l~~~l~~g~ivid~st~~ 96 (298)
T TIGR00872 70 --------------GIVDAVLEELAPTLEKGDIVIDGGNSY 96 (298)
T ss_pred --------------hHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence 02333344444443 566777777654
No 209
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=97.15 E-value=0.0011 Score=62.46 Aligned_cols=96 Identities=15% Similarity=0.118 Sum_probs=62.7
Q ss_pred EEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhC--CCcEEEEcCCCCCC
Q 018512 46 AILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT--GMDLVIIPAGVPRK 123 (354)
Q Consensus 46 ~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~--~aDvVIi~ag~~~~ 123 (354)
.|+||+|++|++++..|+..+. ++++..... . .|+.+ ..++.+.++ ++|+||++|+....
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~--~v~~~~~~~-~---~Dl~~------------~~~l~~~~~~~~~d~Vih~A~~~~~ 62 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGF--TNLVLRTHK-E---LDLTR------------QADVEAFFAKEKPTYVILAAAKVGG 62 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCC--cEEEeeccc-c---CCCCC------------HHHHHHHHhccCCCEEEEeeeeecc
Confidence 3899999999999999988876 444443221 0 11211 123344444 57999999875321
Q ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512 124 ---PGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 159 (354)
Q Consensus 124 ---~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t 159 (354)
......++...|+....++++.+++.....+|+..|
T Consensus 63 ~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS 101 (306)
T PLN02725 63 IHANMTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGS 101 (306)
T ss_pred cchhhhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCc
Confidence 122345677889999999999999876554444433
No 210
>PRK07774 short chain dehydrogenase; Provisional
Probab=97.15 E-value=0.005 Score=56.19 Aligned_cols=114 Identities=17% Similarity=0.161 Sum_probs=66.6
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEE-eCCCcH---Hh-------hh
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGF-LGQPQL---EN-------AL 108 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~-~~~~d~---~~-------al 108 (354)
.+++.|+||+|.+|.+++..|+..|. +|+++|+++. .....++.+... .+..+ .+-++. .+ .+
T Consensus 6 ~k~vlItGasg~iG~~la~~l~~~g~--~vi~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (250)
T PRK07774 6 DKVAIVTGAAGGIGQAYAEALAREGA--SVVVADINAEGAERVAKQIVADGG--TAIAVQVDVSDPDSAKAMADATVSAF 81 (250)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcCC--cEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 35899999999999999999999887 8999998752 222222322211 11111 111222 11 22
Q ss_pred CCCcEEEEcCCCCCC------CCCCH---HHHHHHHHHHHHHHHHHHhhhC---CCeEEEEec
Q 018512 109 TGMDLVIIPAGVPRK------PGMTR---DDLFNINAGIVRTLCEGIAKCC---PNATVNLIS 159 (354)
Q Consensus 109 ~~aDvVIi~ag~~~~------~g~~r---~d~~~~n~~~~~~i~~~i~~~~---p~a~viv~t 159 (354)
...|+||+++|.... ...+. .+.+..|+.....+.+.+.++. +.+.|+++|
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~s 144 (250)
T PRK07774 82 GGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQS 144 (250)
T ss_pred CCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEe
Confidence 468999999986421 11222 2345567666666666655442 234566555
No 211
>PRK08655 prephenate dehydrogenase; Provisional
Probab=97.15 E-value=0.003 Score=63.52 Aligned_cols=66 Identities=24% Similarity=0.374 Sum_probs=47.1
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 118 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a 118 (354)
|||+||||+|.+|..++..|...|+ +|.++|+++... .++.... . +.. +++..+++.+||+||++.
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~G~--~V~v~~r~~~~~--~~~a~~~-g--v~~---~~~~~e~~~~aDvVIlav 66 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEKGF--EVIVTGRDPKKG--KEVAKEL-G--VEY---ANDNIDAAKDADIVIISV 66 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHCCC--EEEEEECChHHH--HHHHHHc-C--Cee---ccCHHHHhccCCEEEEec
Confidence 6899998669999999999998887 899999875221 1111111 1 111 245677899999999985
No 212
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.13 E-value=0.02 Score=52.55 Aligned_cols=157 Identities=15% Similarity=0.121 Sum_probs=94.0
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEeCCC-------cHHhhhCCCcE
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQP-------QLENALTGMDL 113 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~~~-------d~~~al~~aDv 113 (354)
+-+.|+||++.+|.++|..|...|. .|+|..++. ++..+.++.+....+..-.+.+.. .+.+.+...|+
T Consensus 7 kv~lITGASSGiG~A~A~~l~~~G~--~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDi 84 (246)
T COG4221 7 KVALITGASSGIGEATARALAEAGA--KVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDI 84 (246)
T ss_pred cEEEEecCcchHHHHHHHHHHHCCC--eEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccE
Confidence 4588999999999999999999999 999999986 455556666411111110011111 13455688999
Q ss_pred EEEcCCCCCCCC------CCHHHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCE
Q 018512 114 VIIPAGVPRKPG------MTRDDLFNINAGIVRTLCEGIAKC---CPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKL 184 (354)
Q Consensus 114 VIi~ag~~~~~g------~~r~d~~~~n~~~~~~i~~~i~~~---~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kv 184 (354)
+|..||...-.. .+...++..|+..+......+-.. ...+.||+.+.-.... .+|...+
T Consensus 85 LvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~------------~y~~~~v 152 (246)
T COG4221 85 LVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRY------------PYPGGAV 152 (246)
T ss_pred EEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccc------------cCCCCcc
Confidence 999999754321 124567778887766665554432 2356888887533322 3666778
Q ss_pred EEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512 185 LGVTMLDVVRANTFVAEVLGLDPRDVDVPVV 215 (354)
Q Consensus 185 iG~t~ld~~r~~~~la~~l~v~~~~v~~~v~ 215 (354)
+|-|.-....|...|-..+ ....|++..|
T Consensus 153 Y~ATK~aV~~fs~~LR~e~--~g~~IRVt~I 181 (246)
T COG4221 153 YGATKAAVRAFSLGLRQEL--AGTGIRVTVI 181 (246)
T ss_pred chhhHHHHHHHHHHHHHHh--cCCCeeEEEe
Confidence 8776433333333333322 2344544443
No 213
>PRK06841 short chain dehydrogenase; Provisional
Probab=97.13 E-value=0.0051 Score=56.38 Aligned_cols=114 Identities=19% Similarity=0.308 Sum_probs=65.7
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc-hhHHHHHhcCCCCCeEEEE-eCCCc---HHhh-------h
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGF-LGQPQ---LENA-------L 108 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~-~g~~~dl~~~~~~~~v~~~-~~~~d---~~~a-------l 108 (354)
+.++|.|+||+|.+|+.++..|+..|. +|++.+++.. .....++.. ..+..+ .+-.+ +++. +
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~----~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGA--RVALLDRSEDVAEVAAQLLG----GNAKGLVCDVSDSQSVEAAVAAVISAF 87 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHhhC----CceEEEEecCCCHHHHHHHHHHHHHHh
Confidence 345899999999999999999999887 8999998752 112222221 111111 11112 2222 2
Q ss_pred CCCcEEEEcCCCCCCCC---CCH---HHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecC
Q 018512 109 TGMDLVIIPAGVPRKPG---MTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISN 160 (354)
Q Consensus 109 ~~aDvVIi~ag~~~~~g---~~r---~d~~~~n~~~~~~i~~~i~~~---~p~a~viv~tN 160 (354)
...|+||+++|...... .+. ...+..|+.....+.+.+..+ ...+.++++|.
T Consensus 88 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS 148 (255)
T PRK06841 88 GRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLAS 148 (255)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcc
Confidence 46799999998643111 111 224566766666666665443 12455665553
No 214
>PLN02688 pyrroline-5-carboxylate reductase
Probab=97.12 E-value=0.0043 Score=57.88 Aligned_cols=66 Identities=17% Similarity=0.287 Sum_probs=46.3
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCC--CcEEEEE-ecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPL--VSVLHLY-DVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 118 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~--~~ei~L~-D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a 118 (354)
|||++||. |.+|..++..|+..++ ..+|+++ |+++.. ...+.... +.. ..+..+++++||+||++.
T Consensus 1 ~kI~~IG~-G~mG~a~a~~L~~~g~~~~~~i~v~~~r~~~~--~~~~~~~g----~~~---~~~~~e~~~~aDvVil~v 69 (266)
T PLN02688 1 FRVGFIGA-GKMAEAIARGLVASGVVPPSRISTADDSNPAR--RDVFQSLG----VKT---AASNTEVVKSSDVIILAV 69 (266)
T ss_pred CeEEEECC-cHHHHHHHHHHHHCCCCCcceEEEEeCCCHHH--HHHHHHcC----CEE---eCChHHHHhcCCEEEEEE
Confidence 79999998 9999999999998775 4578888 765422 22232221 222 124467789999999985
No 215
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=97.12 E-value=0.011 Score=53.79 Aligned_cols=115 Identities=13% Similarity=0.205 Sum_probs=65.4
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC---chhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh------
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL------ 108 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~---~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al------ 108 (354)
..++.|+||+|.+|+.++..|+..|. ++++.+... ......++.+.. ..+..+. +-.+ +.+++
T Consensus 6 ~~~~lItG~s~~iG~~la~~l~~~g~--~v~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (247)
T PRK12935 6 GKVAIVTGGAKGIGKAITVALAQEGA--KVVINYNSSKEAAENLVNELGKEG--HDVYAVQADVSKVEDANRLVEEAVNH 81 (247)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCC--EEEEEcCCcHHHHHHHHHHHHhcC--CeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 35899999999999999999998887 776655432 222223343221 1222211 1112 22233
Q ss_pred -CCCcEEEEcCCCCCCCC------CCHHHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecC
Q 018512 109 -TGMDLVIIPAGVPRKPG------MTRDDLFNINAGIVRTLCEGIAKC---CPNATVNLISN 160 (354)
Q Consensus 109 -~~aDvVIi~ag~~~~~g------~~r~d~~~~n~~~~~~i~~~i~~~---~p~a~viv~tN 160 (354)
...|+||+++|...... ....+.+..|+.....+.+.+..+ ...+.++++|.
T Consensus 82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS 143 (247)
T PRK12935 82 FGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISS 143 (247)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcc
Confidence 34799999998743221 112344567777666666665543 23445555554
No 216
>PRK06101 short chain dehydrogenase; Provisional
Probab=97.11 E-value=0.011 Score=53.91 Aligned_cols=145 Identities=19% Similarity=0.148 Sum_probs=80.1
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCe-EEE-EeCCCcHHhhhCC----CcEEEE
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAV-VRG-FLGQPQLENALTG----MDLVII 116 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~-v~~-~~~~~d~~~al~~----aDvVIi 116 (354)
.++.|+||+|.+|..++..|+..|. +|++.|+++... .++........ +.. .....+.+++++. .|.+|+
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~--~V~~~~r~~~~~--~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~ 77 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGW--QVIACGRNQSVL--DELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIF 77 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCC--EEEEEECCHHHH--HHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEE
Confidence 4799999999999999999999887 899999875211 11211111111 111 1111223333333 478888
Q ss_pred cCCCCCCCC---CCH---HHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEecc
Q 018512 117 PAGVPRKPG---MTR---DDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTM 189 (354)
Q Consensus 117 ~ag~~~~~g---~~r---~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~t~ 189 (354)
.+|...... .+. .+.+.-|+.....+.+.+..+- +.+.++++|.-.... +.|..-.++.+.
T Consensus 78 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~------------~~~~~~~Y~asK 145 (240)
T PRK06101 78 NAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASEL------------ALPRAEAYGASK 145 (240)
T ss_pred cCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhcc------------CCCCCchhhHHH
Confidence 777432111 222 2356778877777777776542 344555555322111 233333455554
Q ss_pred chHHHHHHHHHHHh
Q 018512 190 LDVVRANTFVAEVL 203 (354)
Q Consensus 190 ld~~r~~~~la~~l 203 (354)
....++.+.++..+
T Consensus 146 ~a~~~~~~~l~~e~ 159 (240)
T PRK06101 146 AAVAYFARTLQLDL 159 (240)
T ss_pred HHHHHHHHHHHHHH
Confidence 44455666666544
No 217
>PRK06179 short chain dehydrogenase; Provisional
Probab=97.11 E-value=0.0058 Score=56.67 Aligned_cols=110 Identities=15% Similarity=0.153 Sum_probs=62.3
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEE-EeCCCcHHhhhC-------CCcEE
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENALT-------GMDLV 114 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~~~d~~~al~-------~aDvV 114 (354)
++|.|+||+|.+|+.++..|+..|. +|++.+++..... ...+. ..+.. .....+++++++ ..|+|
T Consensus 5 ~~vlVtGasg~iG~~~a~~l~~~g~--~V~~~~r~~~~~~--~~~~~---~~~~~D~~d~~~~~~~~~~~~~~~g~~d~l 77 (270)
T PRK06179 5 KVALVTGASSGIGRATAEKLARAGY--RVFGTSRNPARAA--PIPGV---ELLELDVTDDASVQAAVDEVIARAGRIDVL 77 (270)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC--EEEEEeCChhhcc--ccCCC---eeEEeecCCHHHHHHHHHHHHHhCCCCCEE
Confidence 4799999999999999999999887 8999998752110 00110 01111 111122334443 46999
Q ss_pred EEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHH----HhhhCCCeEEEEecC
Q 018512 115 IIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEG----IAKCCPNATVNLISN 160 (354)
Q Consensus 115 Ii~ag~~~~~g---~~---r~d~~~~n~~~~~~i~~~----i~~~~p~a~viv~tN 160 (354)
|+++|...... .+ ....+..|......+.+. +++.+. +.|+++|.
T Consensus 78 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~-~~iv~isS 132 (270)
T PRK06179 78 VNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGS-GRIINISS 132 (270)
T ss_pred EECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC-ceEEEECC
Confidence 99998753221 11 233445565444444444 454443 44555554
No 218
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=97.11 E-value=0.0085 Score=54.68 Aligned_cols=113 Identities=16% Similarity=0.183 Sum_probs=64.1
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEE-eCCCc----------HHhhhC
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGF-LGQPQ----------LENALT 109 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~-~~~~d----------~~~al~ 109 (354)
++|.|+||+|++|+.++..|+..|. +|++++++.. .....++.... ..+..+ .+-.| ..+.+.
T Consensus 2 ~~vlItGa~g~lG~~l~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 77 (255)
T TIGR01963 2 KTALVTGAASGIGLAIALALAAAGA--NVVVNDLGEAGAEAAAKVATDAG--GSVIYLVADVTKEDEIADMIAAAAAEFG 77 (255)
T ss_pred CEEEEcCCcchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 4799999999999999999999888 8999999762 11222222211 112211 11122 123356
Q ss_pred CCcEEEEcCCCCCC-C--CCCH---HHHHHHHHHHHHHHHHHH----hhhCCCeEEEEecC
Q 018512 110 GMDLVIIPAGVPRK-P--GMTR---DDLFNINAGIVRTLCEGI----AKCCPNATVNLISN 160 (354)
Q Consensus 110 ~aDvVIi~ag~~~~-~--g~~r---~d~~~~n~~~~~~i~~~i----~~~~p~a~viv~tN 160 (354)
+.|+||+.++.... + ..+. ......|......+.+.+ ++... ..++++|.
T Consensus 78 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~-~~~v~~ss 137 (255)
T TIGR01963 78 GLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGW-GRIINIAS 137 (255)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC-eEEEEEcc
Confidence 78999999886421 1 1112 233445666555555544 44333 34555543
No 219
>PRK05650 short chain dehydrogenase; Provisional
Probab=97.11 E-value=0.0064 Score=56.49 Aligned_cols=113 Identities=19% Similarity=0.142 Sum_probs=64.3
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEE-eCCCc---HHhh-------hC
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGF-LGQPQ---LENA-------LT 109 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~-~~~~d---~~~a-------l~ 109 (354)
++|.|+||+|.+|+.++..|+..|. +|++.|++.. .....++..... .+..+ .+-++ ..+. +.
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~--~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~D~~~~~~~~~~~~~i~~~~~ 76 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGW--RLALADVNEEGGEETLKLLREAGG--DGFYQRCDVRDYSQLTALAQACEEKWG 76 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcCC--ceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4799999999999999999999887 8999998752 222233433221 11111 11122 2222 24
Q ss_pred CCcEEEEcCCCCCCC---CCCHH---HHHHHHHH----HHHHHHHHHhhhCCCeEEEEecC
Q 018512 110 GMDLVIIPAGVPRKP---GMTRD---DLFNINAG----IVRTLCEGIAKCCPNATVNLISN 160 (354)
Q Consensus 110 ~aDvVIi~ag~~~~~---g~~r~---d~~~~n~~----~~~~i~~~i~~~~p~a~viv~tN 160 (354)
..|+||+++|..... ..+.. ..+..|+. ..+.+.+.+++.. .+.|+++|.
T Consensus 77 ~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS 136 (270)
T PRK05650 77 GIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQK-SGRIVNIAS 136 (270)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-CCEEEEECC
Confidence 689999998864321 12222 23455644 4444555555543 345555553
No 220
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=97.11 E-value=0.00051 Score=65.08 Aligned_cols=96 Identities=22% Similarity=0.253 Sum_probs=59.1
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhh--CCCcEEEEcCCC
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENAL--TGMDLVIIPAGV 120 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al--~~aDvVIi~ag~ 120 (354)
|||.|+||+|++|+++...|...++ +++.++... .|+.+.. .+.+.+ .+.|+||++|+.
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~~--~v~~~~r~~-----~dl~d~~------------~~~~~~~~~~pd~Vin~aa~ 61 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERGY--EVIATSRSD-----LDLTDPE------------AVAKLLEAFKPDVVINCAAY 61 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTSE--EEEEESTTC-----S-TTSHH------------HHHHHHHHH--SEEEE----
T ss_pred CEEEEECCCCHHHHHHHHHHhhCCC--EEEEeCchh-----cCCCCHH------------HHHHHHHHhCCCeEecccee
Confidence 8999999999999999999988777 888887653 2222211 111112 258999999876
Q ss_pred CCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512 121 PRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 159 (354)
Q Consensus 121 ~~~~--g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t 159 (354)
.... ..........|+.....+++.+.+.+ +.+|.+|
T Consensus 62 ~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~--~~li~~S 100 (286)
T PF04321_consen 62 TNVDACEKNPEEAYAINVDATKNLAEACKERG--ARLIHIS 100 (286)
T ss_dssp --HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT---EEEEEE
T ss_pred ecHHhhhhChhhhHHHhhHHHHHHHHHHHHcC--CcEEEee
Confidence 4211 12344566789999999999998763 4444443
No 221
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=97.10 E-value=0.0066 Score=55.71 Aligned_cols=114 Identities=20% Similarity=0.277 Sum_probs=64.9
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEE-eCCCc---HHhh-------h
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF-LGQPQ---LENA-------L 108 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~-~~~~d---~~~a-------l 108 (354)
.+++.|+||+|.+|.+++..|+..|. +|++.|++. ......++.+.. ..+..+ .+-.| .++. +
T Consensus 9 ~k~~lItGas~giG~~ia~~L~~~G~--~vvl~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (254)
T PRK08085 9 GKNILITGSAQGIGFLLATGLAEYGA--EIIINDITAERAELAVAKLRQEG--IKAHAAPFNVTHKQEVEAAIEHIEKDI 84 (254)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCC--EEEEEcCCHHHHHHHHHHHHhcC--CeEEEEecCCCCHHHHHHHHHHHHHhc
Confidence 34899999999999999999999887 899999875 222233343322 111111 11112 1121 2
Q ss_pred CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhh---CCCeEEEEec
Q 018512 109 TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLIS 159 (354)
Q Consensus 109 ~~aDvVIi~ag~~~~~---g~~---r~d~~~~n~~~~~~i~~~i~~~---~p~a~viv~t 159 (354)
...|+||+++|..... ..+ ....+..|+.....+.+.+.++ ...+.|+++|
T Consensus 85 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~is 144 (254)
T PRK08085 85 GPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINIC 144 (254)
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEc
Confidence 4579999999864211 112 2234556655544444444433 2335566555
No 222
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=97.10 E-value=0.0049 Score=56.78 Aligned_cols=156 Identities=17% Similarity=0.205 Sum_probs=83.3
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEE-eCCC---cHHhh-------hCC
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGF-LGQP---QLENA-------LTG 110 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~-~~~~---d~~~a-------l~~ 110 (354)
.+++.|+||+|.+|..++..|+..|. +|++++++........+.... ..+..+ .+-+ +.+++ +..
T Consensus 8 ~k~~lItGas~gIG~aia~~l~~~G~--~vv~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 83 (251)
T PRK12481 8 GKVAIITGCNTGLGQGMAIGLAKAGA--DIVGVGVAEAPETQAQVEALG--RKFHFITADLIQQKDIDSIVSQAVEVMGH 83 (251)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEecCchHHHHHHHHHHcC--CeEEEEEeCCCCHHHHHHHHHHHHHHcCC
Confidence 35799999999999999999999998 899998754322222232221 112111 1111 22222 245
Q ss_pred CcEEEEcCCCCCCC---CCCH---HHHHHHHHH----HHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCC
Q 018512 111 MDLVIIPAGVPRKP---GMTR---DDLFNINAG----IVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYD 180 (354)
Q Consensus 111 aDvVIi~ag~~~~~---g~~r---~d~~~~n~~----~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p 180 (354)
.|++|+.||..... ..+. ...+..|+. ..+.+.+.+.+....+.||+++...... +.+
T Consensus 84 iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~------------~~~ 151 (251)
T PRK12481 84 IDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQ------------GGI 151 (251)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcC------------CCC
Confidence 79999999864321 1122 223445544 3455555555444346666665432211 122
Q ss_pred CCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512 181 PKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV 215 (354)
Q Consensus 181 ~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~ 215 (354)
..-.++.+......+.+.+|..+. +..|++..+
T Consensus 152 ~~~~Y~asK~a~~~l~~~la~e~~--~~girvn~v 184 (251)
T PRK12481 152 RVPSYTASKSAVMGLTRALATELS--QYNINVNAI 184 (251)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHh--hcCeEEEEE
Confidence 222345544444556666776653 344444333
No 223
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=97.10 E-value=0.0085 Score=55.49 Aligned_cols=147 Identities=14% Similarity=0.164 Sum_probs=79.1
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEE-eCCCcH---Hhh-------
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF-LGQPQL---ENA------- 107 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~-~~~~d~---~~a------- 107 (354)
+.+++.|+||+|.+|..++..|+..|. ++++.|.+. ......++.... ..+..+ .+-++. +++
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~--~vv~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~ 84 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGA--TIVFNDINQELVDKGLAAYRELG--IEAHGYVCDVTDEDGVQAMVSQIEKE 84 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHHh
Confidence 445899999999999999999998887 889998875 222223333221 112211 111221 122
Q ss_pred hCCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhC
Q 018512 108 LTGMDLVIIPAGVPRKP---GMTR---DDLFNINAGI----VRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAG 177 (354)
Q Consensus 108 l~~aDvVIi~ag~~~~~---g~~r---~d~~~~n~~~----~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~ 177 (354)
+...|+||+++|..... ..+. ...+..|+.. .+.+.+.+++. ..+.|++++......
T Consensus 85 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~------------ 151 (265)
T PRK07097 85 VGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKK-GHGKIINICSMMSEL------------ 151 (265)
T ss_pred CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc-CCcEEEEEcCccccC------------
Confidence 24579999999864211 1111 2233445443 33444444432 355666666543221
Q ss_pred CCCCCCEEEeccchHHHHHHHHHHHhC
Q 018512 178 TYDPKKLLGVTMLDVVRANTFVAEVLG 204 (354)
Q Consensus 178 ~~p~~kviG~t~ld~~r~~~~la~~l~ 204 (354)
+.+..-.++.+...-..+.+.+++.++
T Consensus 152 ~~~~~~~Y~~sKaal~~l~~~la~e~~ 178 (265)
T PRK07097 152 GRETVSAYAAAKGGLKMLTKNIASEYG 178 (265)
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHHhh
Confidence 223333445543333456677777664
No 224
>PRK07680 late competence protein ComER; Validated
Probab=97.10 E-value=0.0038 Score=58.65 Aligned_cols=97 Identities=16% Similarity=0.216 Sum_probs=62.0
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCC--CcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCC
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPL--VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV 120 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~--~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~ 120 (354)
|||+|||+ |.+|+.++..|...+. ..+|.++|++... ...+.+. .+.+... .+..++++++|+||++..
T Consensus 1 m~I~iIG~-G~mG~ala~~L~~~g~~~~~~v~v~~r~~~~--~~~~~~~--~~g~~~~---~~~~~~~~~aDiVilav~- 71 (273)
T PRK07680 1 MNIGFIGT-GNMGTILIEAFLESGAVKPSQLTITNRTPAK--AYHIKER--YPGIHVA---KTIEEVISQSDLIFICVK- 71 (273)
T ss_pred CEEEEECc-cHHHHHHHHHHHHCCCCCcceEEEECCCHHH--HHHHHHH--cCCeEEE---CCHHHHHHhCCEEEEecC-
Confidence 68999998 9999999999988773 2479999987521 1222221 1122322 345677899999999851
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCC
Q 018512 121 PRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVN 163 (354)
Q Consensus 121 ~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~ 163 (354)
| ..+.++++.+..+- ++.+|+-+++++.
T Consensus 72 p---------------~~~~~vl~~l~~~l~~~~~iis~~ag~~ 100 (273)
T PRK07680 72 P---------------LDIYPLLQKLAPHLTDEHCLVSITSPIS 100 (273)
T ss_pred H---------------HHHHHHHHHHHhhcCCCCEEEEECCCCC
Confidence 1 12334445554443 5677777888764
No 225
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=97.10 E-value=0.013 Score=53.83 Aligned_cols=115 Identities=16% Similarity=0.220 Sum_probs=66.2
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh-------CC
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------TG 110 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al-------~~ 110 (354)
.+.+.|+|++|.+|.+++..|+..|. +|+++|.........++.... ..+..+. +-+| .++.+ ..
T Consensus 10 ~k~~lItG~~~gIG~a~a~~l~~~G~--~vv~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 85 (253)
T PRK08993 10 GKVAVVTGCDTGLGQGMALGLAEAGC--DIVGINIVEPTETIEQVTALG--RRFLSLTADLRKIDGIPALLERAVAEFGH 85 (253)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--EEEEecCcchHHHHHHHHhcC--CeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 35799999999999999999999887 888888765322223333221 1122111 1112 22222 36
Q ss_pred CcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHH----HHHHHhhhCCCeEEEEecC
Q 018512 111 MDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRT----LCEGIAKCCPNATVNLISN 160 (354)
Q Consensus 111 aDvVIi~ag~~~~~---g~~---r~d~~~~n~~~~~~----i~~~i~~~~p~a~viv~tN 160 (354)
.|++|++||..... ..+ ....+..|+..... +.+.+.+..+.+.++++|.
T Consensus 86 ~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS 145 (253)
T PRK08993 86 IDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIAS 145 (253)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECc
Confidence 89999999864311 112 23345566555444 4444444444576776654
No 226
>PRK11880 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.09 E-value=0.003 Score=58.98 Aligned_cols=95 Identities=15% Similarity=0.191 Sum_probs=59.1
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCC-CcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCC
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPL-VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV 120 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~-~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~ 120 (354)
+|||+|||+ |.+|..++..|...+. ..++.++|+++.. ...+.+.. . +.. +.+..+.++++|+||++..
T Consensus 2 mm~I~iIG~-G~mG~~la~~l~~~g~~~~~v~v~~r~~~~--~~~~~~~~-g--~~~---~~~~~~~~~~advVil~v~- 71 (267)
T PRK11880 2 MKKIGFIGG-GNMASAIIGGLLASGVPAKDIIVSDPSPEK--RAALAEEY-G--VRA---ATDNQEAAQEADVVVLAVK- 71 (267)
T ss_pred CCEEEEEec-hHHHHHHHHHHHhCCCCcceEEEEcCCHHH--HHHHHHhc-C--Cee---cCChHHHHhcCCEEEEEcC-
Confidence 479999999 9999999999988762 2378999987521 12222210 0 121 2344567899999999841
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCC
Q 018512 121 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV 162 (354)
Q Consensus 121 ~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv 162 (354)
...+.++++.+..+. +..|+..+|-+
T Consensus 72 ---------------~~~~~~v~~~l~~~~-~~~vvs~~~gi 97 (267)
T PRK11880 72 ---------------PQVMEEVLSELKGQL-DKLVVSIAAGV 97 (267)
T ss_pred ---------------HHHHHHHHHHHHhhc-CCEEEEecCCC
Confidence 113444445554433 45566666655
No 227
>PRK05854 short chain dehydrogenase; Provisional
Probab=97.09 E-value=0.0084 Score=57.37 Aligned_cols=172 Identities=17% Similarity=0.078 Sum_probs=86.8
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEE-eCCCcH---H-------h
Q 018512 40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGF-LGQPQL---E-------N 106 (354)
Q Consensus 40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~-~~~~d~---~-------~ 106 (354)
.+.+++.|+||+|.+|..++..|+..|. +|++.+++.. .....++........+..+ .+-.|+ + +
T Consensus 12 l~gk~~lITGas~GIG~~~a~~La~~G~--~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~ 89 (313)
T PRK05854 12 LSGKRAVVTGASDGLGLGLARRLAAAGA--EVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRA 89 (313)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 3456899999999999999999999887 8999998762 2223334321111122221 111222 1 1
Q ss_pred hhCCCcEEEEcCCCCCCC--CCC---HHHHHHHHHH----HHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhC
Q 018512 107 ALTGMDLVIIPAGVPRKP--GMT---RDDLFNINAG----IVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAG 177 (354)
Q Consensus 107 al~~aDvVIi~ag~~~~~--g~~---r~d~~~~n~~----~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~ 177 (354)
.....|++|+.||....+ ..+ ....+..|.. ..+.+.+.+++. .+.|+++|.-......+-..-+....
T Consensus 90 ~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~--~~riv~vsS~~~~~~~~~~~~~~~~~ 167 (313)
T PRK05854 90 EGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG--RARVTSQSSIAARRGAINWDDLNWER 167 (313)
T ss_pred hCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC--CCCeEEEechhhcCCCcCcccccccc
Confidence 224589999999864321 111 2223444543 355555555533 34555554322111000000000001
Q ss_pred CCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512 178 TYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV 215 (354)
Q Consensus 178 ~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~ 215 (354)
.+++...++.+.+....+...+++.+......|.+..+
T Consensus 168 ~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v 205 (313)
T PRK05854 168 SYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLA 205 (313)
T ss_pred cCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEE
Confidence 12333445555555556667777665443444544443
No 228
>PRK08589 short chain dehydrogenase; Validated
Probab=97.09 E-value=0.009 Score=55.72 Aligned_cols=117 Identities=17% Similarity=0.210 Sum_probs=65.7
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC-chhHHHHHhcCCCCCe-EEE-EeCCCcHHhh-------hCC
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAV-VRG-FLGQPQLENA-------LTG 110 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~-~~g~~~dl~~~~~~~~-v~~-~~~~~d~~~a-------l~~ 110 (354)
+.+++.|+||+|.+|..++..|+..|. +|+++++++ ......++.+...... +.. +....+..++ +..
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~--~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 82 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGA--YVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGR 82 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence 345899999999999999999999987 899999874 2222334433211111 111 1111112222 245
Q ss_pred CcEEEEcCCCCCCCC----CCH---HHHHHHHHH----HHHHHHHHHhhhCCCeEEEEecCC
Q 018512 111 MDLVIIPAGVPRKPG----MTR---DDLFNINAG----IVRTLCEGIAKCCPNATVNLISNP 161 (354)
Q Consensus 111 aDvVIi~ag~~~~~g----~~r---~d~~~~n~~----~~~~i~~~i~~~~p~a~viv~tNP 161 (354)
.|++|+.||.....+ .+. ...+..|+. ..+.+.+.+.+. .+.|+++|..
T Consensus 83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~g~iv~isS~ 142 (272)
T PRK08589 83 VDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQ--GGSIINTSSF 142 (272)
T ss_pred cCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCEEEEeCch
Confidence 799999998753211 122 223334544 344555555433 3667776643
No 229
>PRK07063 short chain dehydrogenase; Provisional
Probab=97.09 E-value=0.022 Score=52.44 Aligned_cols=116 Identities=22% Similarity=0.268 Sum_probs=65.4
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh-------
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL------- 108 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al------- 108 (354)
.+++.|+||+|.+|..++..|+..|. +|+++|+++ ......++........+..+. +-++ ..+++
T Consensus 7 ~k~vlVtGas~gIG~~~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (260)
T PRK07063 7 GKVALVTGAAQGIGAAIARAFAREGA--AVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAF 84 (260)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 45799999999999999999999987 899999876 222333343211111222211 1112 22222
Q ss_pred CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHH----HHHHHHHhhhCCCeEEEEecC
Q 018512 109 TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIV----RTLCEGIAKCCPNATVNLISN 160 (354)
Q Consensus 109 ~~aDvVIi~ag~~~~~---g~~r---~d~~~~n~~~~----~~i~~~i~~~~p~a~viv~tN 160 (354)
...|++|+.+|..... ..+. ...+..|+... +...+.+++. ..+.|+++|.
T Consensus 85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~isS 145 (260)
T PRK07063 85 GPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVER-GRGSIVNIAS 145 (260)
T ss_pred CCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhh-CCeEEEEECC
Confidence 3689999999864211 1122 22344555444 4444444433 3456666654
No 230
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=97.09 E-value=0.0013 Score=54.11 Aligned_cols=72 Identities=21% Similarity=0.279 Sum_probs=46.0
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHH-HHhc-CCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512 44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTA-DISH-MDTGAVVRGFLGQPQLENALTGMDLVIIPA 118 (354)
Q Consensus 44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~-dl~~-~~~~~~v~~~~~~~d~~~al~~aDvVIi~a 118 (354)
||+|+||+|++|..++..|...+...-+.+++.....|... +... ......+.... .+ .+.+.++|+||.+.
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~Dvvf~a~ 74 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVED--AD-PEELSDVDVVFLAL 74 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEE--TS-GHHHTTESEEEE-S
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEee--cc-hhHhhcCCEEEecC
Confidence 79999999999999999999877665667777765223211 1111 11122333321 24 36689999999984
No 231
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=97.09 E-value=0.0049 Score=65.25 Aligned_cols=92 Identities=20% Similarity=0.164 Sum_probs=62.0
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhh--CCCcEEEE
Q 018512 39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENAL--TGMDLVII 116 (354)
Q Consensus 39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al--~~aDvVIi 116 (354)
+.+.|||.|+||+|++|++++..|...+. ++... .. |+.+. ..+...+ .+.|+||+
T Consensus 377 ~~~~mkiLVtGa~G~iG~~l~~~L~~~g~--~v~~~-~~-------~l~d~------------~~v~~~i~~~~pd~Vih 434 (668)
T PLN02260 377 GKPSLKFLIYGRTGWIGGLLGKLCEKQGI--AYEYG-KG-------RLEDR------------SSLLADIRNVKPTHVFN 434 (668)
T ss_pred CCCCceEEEECCCchHHHHHHHHHHhCCC--eEEee-cc-------ccccH------------HHHHHHHHhhCCCEEEE
Confidence 44568999999999999999999988776 55211 10 11110 0111222 26899999
Q ss_pred cCCCCCCC--C---CCHHHHHHHHHHHHHHHHHHHhhhCCC
Q 018512 117 PAGVPRKP--G---MTRDDLFNINAGIVRTLCEGIAKCCPN 152 (354)
Q Consensus 117 ~ag~~~~~--g---~~r~d~~~~n~~~~~~i~~~i~~~~p~ 152 (354)
+|+....+ + ....+....|+....++++.+++.+..
T Consensus 435 ~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~~ 475 (668)
T PLN02260 435 AAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENGLL 475 (668)
T ss_pred CCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCCe
Confidence 99865322 1 134566789999999999999988653
No 232
>PLN00016 RNA-binding protein; Provisional
Probab=97.07 E-value=0.0039 Score=61.28 Aligned_cols=101 Identities=18% Similarity=0.157 Sum_probs=60.3
Q ss_pred CCCCCeEEEE----cCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHH------HHHhcCCCCCeEEEEe-CCCcHHhh
Q 018512 39 GAAGFKVAIL----GAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVT------ADISHMDTGAVVRGFL-GQPQLENA 107 (354)
Q Consensus 39 ~~~~~kI~Ii----Ga~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~------~dl~~~~~~~~v~~~~-~~~d~~~a 107 (354)
...++||.|+ ||+|++|++++..|+..|+ +|++++++...... .++.+.. ...++.+. +-.|+.+.
T Consensus 49 ~~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~--~V~~l~R~~~~~~~~~~~~~~~~~~l~-~~~v~~v~~D~~d~~~~ 125 (378)
T PLN00016 49 AVEKKKVLIVNTNSGGHAFIGFYLAKELVKAGH--EVTLFTRGKEPSQKMKKEPFSRFSELS-SAGVKTVWGDPADVKSK 125 (378)
T ss_pred ccccceEEEEeccCCCceeEhHHHHHHHHHCCC--EEEEEecCCcchhhhccCchhhhhHhh-hcCceEEEecHHHHHhh
Confidence 3345789999 9999999999999999998 99999987521110 0011110 01122221 11233344
Q ss_pred h--CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEE
Q 018512 108 L--TGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVN 156 (354)
Q Consensus 108 l--~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~vi 156 (354)
+ .++|+||.+++.. ....+.+++.+++.+.+-+|.
T Consensus 126 ~~~~~~d~Vi~~~~~~--------------~~~~~~ll~aa~~~gvkr~V~ 162 (378)
T PLN00016 126 VAGAGFDVVYDNNGKD--------------LDEVEPVADWAKSPGLKQFLF 162 (378)
T ss_pred hccCCccEEEeCCCCC--------------HHHHHHHHHHHHHcCCCEEEE
Confidence 4 5799999986421 234556777777666554433
No 233
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=97.07 E-value=0.0055 Score=56.67 Aligned_cols=35 Identities=20% Similarity=0.288 Sum_probs=31.5
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 78 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~ 78 (354)
.+++.|+||+|.+|..++..|+..|. +|+++|++.
T Consensus 5 ~k~vlItGas~gIG~~ia~~l~~~G~--~V~~~~r~~ 39 (262)
T TIGR03325 5 GEVVLVTGGASGLGRAIVDRFVAEGA--RVAVLDKSA 39 (262)
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCH
Confidence 45899999999999999999999987 899999865
No 234
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=97.07 E-value=0.0036 Score=59.21 Aligned_cols=65 Identities=18% Similarity=0.249 Sum_probs=49.2
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 118 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a 118 (354)
+||++||- |.+|+..|..|+..|+ +++++|+++.+. +..+..... .. ..+..++.++||+||.+.
T Consensus 1 ~kIafIGL-G~MG~pmA~~L~~aG~--~v~v~~r~~~ka-~~~~~~~Ga----~~---a~s~~eaa~~aDvVitmv 65 (286)
T COG2084 1 MKIAFIGL-GIMGSPMAANLLKAGH--EVTVYNRTPEKA-AELLAAAGA----TV---AASPAEAAAEADVVITML 65 (286)
T ss_pred CeEEEEcC-chhhHHHHHHHHHCCC--EEEEEeCChhhh-hHHHHHcCC----cc---cCCHHHHHHhCCEEEEec
Confidence 58999999 9999999999999998 999999986432 233333221 11 124478999999999974
No 235
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.06 E-value=0.0069 Score=54.76 Aligned_cols=102 Identities=18% Similarity=0.276 Sum_probs=57.4
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc---hhHHHHHhcCCCCCeEEEEe-CCCc---HHhh------
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTGAVVRGFL-GQPQ---LENA------ 107 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~---~g~~~dl~~~~~~~~v~~~~-~~~d---~~~a------ 107 (354)
++++|.|+||+|.+|+.++..|+++|+ ++++...... .....++.... ..+..+. +-.+ +.++
T Consensus 5 ~~~~vlItGasg~iG~~l~~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~ 80 (249)
T PRK12825 5 MGRVALVTGAARGLGRAIALRLARAGA--DVVVHYRSDEEAAEELVEAVEALG--RRAQAVQADVTDKAALEAAVAAAVE 80 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC--eEEEEeCCCHHHHHHHHHHHHhcC--CceEEEECCcCCHHHHHHHHHHHHH
Confidence 346899999999999999999999988 6666555431 11122222211 1222211 1112 2222
Q ss_pred -hCCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHH
Q 018512 108 -LTGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGI 146 (354)
Q Consensus 108 -l~~aDvVIi~ag~~~~~---g~~r---~d~~~~n~~~~~~i~~~i 146 (354)
+.+.|+||+++|..... ..+. .+.+..|+.....+.+.+
T Consensus 81 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~ 126 (249)
T PRK12825 81 RFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAV 126 (249)
T ss_pred HcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHH
Confidence 24679999999854221 1222 334556666655555555
No 236
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=97.05 E-value=0.0083 Score=55.25 Aligned_cols=115 Identities=17% Similarity=0.179 Sum_probs=64.5
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC-chhHHHHHhcCCCCCeEEEE-eCCCc---HHhhhC------
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGF-LGQPQ---LENALT------ 109 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~-~~g~~~dl~~~~~~~~v~~~-~~~~d---~~~al~------ 109 (354)
..++|.|+||+|.+|..++..|+..|. .|++++.+. .......+.... ..+..+ .+-++ .++.++
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~--~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~ 89 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGA--DIIITTHGTNWDETRRLIEKEG--RKVTFVQVDLTKPESAEKVVKEALEEF 89 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCcHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 346899999999999999999999887 889998864 222222222221 112211 11122 222333
Q ss_pred -CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHH----HHHhhhCCCeEEEEecC
Q 018512 110 -GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLC----EGIAKCCPNATVNLISN 160 (354)
Q Consensus 110 -~aDvVIi~ag~~~~~---g~~---r~d~~~~n~~~~~~i~----~~i~~~~p~a~viv~tN 160 (354)
..|++|+++|..... ..+ ..+.+..|+.....+. +.+++.. .+.++++|.
T Consensus 90 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS 150 (258)
T PRK06935 90 GKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQG-SGKIINIAS 150 (258)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcC-CeEEEEECC
Confidence 679999999864311 112 2233455655544444 4444332 355666654
No 237
>PRK05855 short chain dehydrogenase; Validated
Probab=97.05 E-value=0.022 Score=58.54 Aligned_cols=118 Identities=18% Similarity=0.187 Sum_probs=69.3
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEe-CCCcH---Hhh-----
Q 018512 39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQL---ENA----- 107 (354)
Q Consensus 39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~-~~~d~---~~a----- 107 (354)
+.+.+++.|+||+|.+|..++..|+..|. +|++.+++.. .....++.... ..+..+. +-+|. .+.
T Consensus 312 ~~~~~~~lv~G~s~giG~~~a~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~~~~~~~~~~ 387 (582)
T PRK05855 312 PFSGKLVVVTGAGSGIGRETALAFAREGA--EVVASDIDEAAAERTAELIRAAG--AVAHAYRVDVSDADAMEAFAEWVR 387 (582)
T ss_pred cCCCCEEEEECCcCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHH
Confidence 44557899999999999999999999988 8999998762 22233333221 1122111 11221 122
Q ss_pred --hCCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHH----HHHHHHHhhhCCCeEEEEecC
Q 018512 108 --LTGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIV----RTLCEGIAKCCPNATVNLISN 160 (354)
Q Consensus 108 --l~~aDvVIi~ag~~~~~---g~~r---~d~~~~n~~~~----~~i~~~i~~~~p~a~viv~tN 160 (354)
+...|++|++||..... ..+. ...+.-|+... +.+.+.+.+.+..+.|+++|.
T Consensus 388 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS 452 (582)
T PRK05855 388 AEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVAS 452 (582)
T ss_pred HhcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECC
Confidence 23579999999875321 1222 22344565444 445555665555566776664
No 238
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=97.05 E-value=0.011 Score=54.27 Aligned_cols=116 Identities=19% Similarity=0.204 Sum_probs=66.4
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEE-eCCCc---HHh-------h
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF-LGQPQ---LEN-------A 107 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~-~~~~d---~~~-------a 107 (354)
..++|.|+||+|.+|+.++..|...|. ++++.|.+. ......++.+... .+..+ .+-++ ..+ .
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~--~vv~~~r~~~~~~~~~~~l~~~~~--~~~~~~~D~~~~~~i~~~~~~~~~~ 85 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGA--SVVVSDINADAANHVVDEIQQLGG--QAFACRCDITSEQELSALADFALSK 85 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHhcCC--cEEEEEccCCCHHHHHHHHHHHHHH
Confidence 346899999999999999999999887 889999865 2222233333211 11111 11112 122 2
Q ss_pred hCCCcEEEEcCCCCCC--CCCCHHH---HHHHHHHHHHHHHHHHhhh---CCCeEEEEecC
Q 018512 108 LTGMDLVIIPAGVPRK--PGMTRDD---LFNINAGIVRTLCEGIAKC---CPNATVNLISN 160 (354)
Q Consensus 108 l~~aDvVIi~ag~~~~--~g~~r~d---~~~~n~~~~~~i~~~i~~~---~p~a~viv~tN 160 (354)
+...|++|+++|.... ...+..+ .+..|+.....+.+.+..+ ...+.++++|.
T Consensus 86 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS 146 (255)
T PRK06113 86 LGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITS 146 (255)
T ss_pred cCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEec
Confidence 3457999999885321 1222222 3566776666666655432 22344555543
No 239
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=97.04 E-value=0.0086 Score=52.71 Aligned_cols=104 Identities=17% Similarity=0.181 Sum_probs=63.0
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCCCC
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPR 122 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~~~ 122 (354)
|||+||||+|.+|+.++...+.+|+ |++-+=+++.+-.+. +.... ..-..+ ..+.+.+++.|-|+||.+-|.+.
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGH--eVTAivRn~~K~~~~--~~~~i-~q~Dif-d~~~~a~~l~g~DaVIsA~~~~~ 74 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGH--EVTAIVRNASKLAAR--QGVTI-LQKDIF-DLTSLASDLAGHDAVISAFGAGA 74 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCC--eeEEEEeChHhcccc--cccee-eccccc-ChhhhHhhhcCCceEEEeccCCC
Confidence 7999999999999999999999999 999888876221110 10000 000111 11234578999999999865542
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512 123 KPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 159 (354)
Q Consensus 123 ~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t 159 (354)
++. + ..-.+..+.+...++.. -...++++.
T Consensus 75 -~~~---~--~~~~k~~~~li~~l~~a-gv~RllVVG 104 (211)
T COG2910 75 -SDN---D--ELHSKSIEALIEALKGA-GVPRLLVVG 104 (211)
T ss_pred -CCh---h--HHHHHHHHHHHHHHhhc-CCeeEEEEc
Confidence 111 1 12223355555555543 355666664
No 240
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=97.04 E-value=0.011 Score=58.93 Aligned_cols=102 Identities=22% Similarity=0.232 Sum_probs=60.3
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCe-EEE-EeCCCcHHhhhCCCcEEEEcC
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAV-VRG-FLGQPQLENALTGMDLVIIPA 118 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~-v~~-~~~~~d~~~al~~aDvVIi~a 118 (354)
++++|.|+||+|.+|.+++..|+..|. +|+++|+++.. ....+........ +.. .....+..+.+.+.|++|+.|
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~--~Vi~l~r~~~~-l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInnA 253 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGA--KVVALTSNSDK-ITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIINH 253 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCCHHH-HHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEECC
Confidence 456899999999999999999999887 89999986521 1111211111111 111 111123345678999999998
Q ss_pred CCCCCCCCCH---HHHHHHHHHHHHHHHHH
Q 018512 119 GVPRKPGMTR---DDLFNINAGIVRTLCEG 145 (354)
Q Consensus 119 g~~~~~g~~r---~d~~~~n~~~~~~i~~~ 145 (354)
|.......+. .+.+..|+.....+.+.
T Consensus 254 Gi~~~~~~s~e~~~~~~~vNv~g~i~Li~a 283 (406)
T PRK07424 254 GINVHGERTPEAINKSYEVNTFSAWRLMEL 283 (406)
T ss_pred CcCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 8653323332 23445565544444444
No 241
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=97.04 E-value=0.0066 Score=54.88 Aligned_cols=114 Identities=18% Similarity=0.313 Sum_probs=64.4
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEE-eCCCc---HHhhh-------
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGF-LGQPQ---LENAL------- 108 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~-~~~~d---~~~al------- 108 (354)
.++|+|+||+|.+|..++..|+..|. +|.++++++. .....++.... ..+..+ .+-.| +..++
T Consensus 5 ~~~ilItGasg~iG~~l~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (246)
T PRK05653 5 GKTALVTGASRGIGRAIALRLAADGA--KVVIYDSNEEAAEALAAELRAAG--GEARVLVFDVSDEAAVRALIEAAVEAF 80 (246)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhcC--CceEEEEccCCCHHHHHHHHHHHHHHh
Confidence 36899999999999999999999888 7999998762 22223333221 111111 01111 22222
Q ss_pred CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHhhh---CCCeEEEEec
Q 018512 109 TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLIS 159 (354)
Q Consensus 109 ~~aDvVIi~ag~~~~~---g~~r---~d~~~~n~~~~~~i~~~i~~~---~p~a~viv~t 159 (354)
...|.||+++|..... ..+. .+.+..|+.....+.+.+..+ .....++++|
T Consensus 81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~s 140 (246)
T PRK05653 81 GALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNIS 140 (246)
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEC
Confidence 3469999998753221 1122 234556666666665555432 2223455554
No 242
>PRK07109 short chain dehydrogenase; Provisional
Probab=97.03 E-value=0.013 Score=56.73 Aligned_cols=114 Identities=14% Similarity=0.098 Sum_probs=65.6
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEE-eCCCc---HHhh-------
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF-LGQPQ---LENA------- 107 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~-~~~~d---~~~a------- 107 (354)
+.++|+|+||+|.+|..++..|+..|. +|+++++++ ......++.... ..+..+ .+-+| .+++
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~--~Vvl~~R~~~~l~~~~~~l~~~g--~~~~~v~~Dv~d~~~v~~~~~~~~~~ 82 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGA--KVVLLARGEEGLEALAAEIRAAG--GEALAVVADVADAEAVQAAADRAEEE 82 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHHcC--CcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 345899999999999999999999987 899999875 222333343322 112111 11122 2222
Q ss_pred hCCCcEEEEcCCCCCCC---CCCHHH---HHHHH----HHHHHHHHHHHhhhCCCeEEEEec
Q 018512 108 LTGMDLVIIPAGVPRKP---GMTRDD---LFNIN----AGIVRTLCEGIAKCCPNATVNLIS 159 (354)
Q Consensus 108 l~~aDvVIi~ag~~~~~---g~~r~d---~~~~n----~~~~~~i~~~i~~~~p~a~viv~t 159 (354)
+...|++|+.+|..... ..+..+ .+..| +...+.+.+.+++.. .+.||++|
T Consensus 83 ~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~-~g~iV~is 143 (334)
T PRK07109 83 LGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRD-RGAIIQVG 143 (334)
T ss_pred CCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEeC
Confidence 23689999998864211 112222 22333 445556666666543 35556554
No 243
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=97.02 E-value=0.011 Score=53.99 Aligned_cols=112 Identities=16% Similarity=0.271 Sum_probs=64.4
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCc---HHhh-------hCC
Q 018512 44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENA-------LTG 110 (354)
Q Consensus 44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~a-------l~~ 110 (354)
++.|+||+|.+|..++..|+..|. +|++++.+. ......++.... ..+..+. +-+| +.++ +..
T Consensus 2 ~~lItG~sg~iG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~ 77 (254)
T TIGR02415 2 VALVTGGAQGIGKGIAERLAKDGF--AVAVADLNEETAKETAKEINQAG--GKAVAYKLDVSDKDQVFSAIDQAAEKFGG 77 (254)
T ss_pred EEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 689999999999999999999887 899999875 222223333322 1122211 1112 1222 235
Q ss_pred CcEEEEcCCCCCCC---CCCHH---HHHHHHHH----HHHHHHHHHhhhCCCeEEEEec
Q 018512 111 MDLVIIPAGVPRKP---GMTRD---DLFNINAG----IVRTLCEGIAKCCPNATVNLIS 159 (354)
Q Consensus 111 aDvVIi~ag~~~~~---g~~r~---d~~~~n~~----~~~~i~~~i~~~~p~a~viv~t 159 (354)
.|+||+++|..... +.+.. ..+..|+. .++.+.+.+++....+.++++|
T Consensus 78 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~s 136 (254)
T TIGR02415 78 FDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAA 136 (254)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEec
Confidence 79999998864211 22222 23445554 3345555665555456666554
No 244
>PRK07478 short chain dehydrogenase; Provisional
Probab=97.02 E-value=0.018 Score=52.86 Aligned_cols=147 Identities=16% Similarity=0.155 Sum_probs=81.3
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEE-eCCCc---HHhhh-------
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF-LGQPQ---LENAL------- 108 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~-~~~~d---~~~al------- 108 (354)
.+++.|+||+|.+|..++..|+..|. +|++.++++ ......++.+.. ..+..+ .+-.+ .++++
T Consensus 6 ~k~~lItGas~giG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (254)
T PRK07478 6 GKVAIITGASSGIGRAAAKLFAREGA--KVVVGARRQAELDQLVAEIRAEG--GEAVALAGDVRDEAYAKALVALAVERF 81 (254)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 35899999999999999999999888 899999875 222333443322 112211 11112 22222
Q ss_pred CCCcEEEEcCCCCC--CC--CCCH---HHHHHHHHH----HHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhC
Q 018512 109 TGMDLVIIPAGVPR--KP--GMTR---DDLFNINAG----IVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAG 177 (354)
Q Consensus 109 ~~aDvVIi~ag~~~--~~--g~~r---~d~~~~n~~----~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~ 177 (354)
...|++|+.||... .+ ..+. ...+..|+. ..+.+.+.+++.. .+.|+++|...... .
T Consensus 82 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~-~~~iv~~sS~~~~~-----------~ 149 (254)
T PRK07478 82 GGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARG-GGSLIFTSTFVGHT-----------A 149 (254)
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEechHhhc-----------c
Confidence 36899999998632 11 1222 234556664 4445555655443 34555555321110 1
Q ss_pred CCCCCCEEEeccchHHHHHHHHHHHhC
Q 018512 178 TYDPKKLLGVTMLDVVRANTFVAEVLG 204 (354)
Q Consensus 178 ~~p~~kviG~t~ld~~r~~~~la~~l~ 204 (354)
+.|..-.++.+......+...+++.++
T Consensus 150 ~~~~~~~Y~~sK~a~~~~~~~la~e~~ 176 (254)
T PRK07478 150 GFPGMAAYAASKAGLIGLTQVLAAEYG 176 (254)
T ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHh
Confidence 233333455554444556677777664
No 245
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=97.02 E-value=0.0031 Score=59.73 Aligned_cols=63 Identities=14% Similarity=0.246 Sum_probs=46.4
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512 44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 118 (354)
Q Consensus 44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a 118 (354)
||+|||. |.+|+.++..|+..|+ +|.++|+++.. ...+..... . ...+..+++++||+||++.
T Consensus 1 ~IgvIG~-G~mG~~iA~~l~~~G~--~V~~~dr~~~~--~~~~~~~g~----~---~~~~~~~~~~~aDivi~~v 63 (291)
T TIGR01505 1 KVGFIGL-GIMGSPMSINLAKAGY--QLHVTTIGPEV--ADELLAAGA----V---TAETARQVTEQADVIFTMV 63 (291)
T ss_pred CEEEEEe-cHHHHHHHHHHHHCCC--eEEEEcCCHHH--HHHHHHCCC----c---ccCCHHHHHhcCCEEEEec
Confidence 6999999 9999999999998887 89999987521 122232221 1 1234568899999999984
No 246
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=97.02 E-value=0.0038 Score=59.26 Aligned_cols=64 Identities=19% Similarity=0.273 Sum_probs=46.9
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 118 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a 118 (354)
|||+|||. |.+|+.++..|...+. +|.++|+++... ..+.... +.. ..++++++++||+||++.
T Consensus 3 ~~IgviG~-G~mG~~~a~~l~~~g~--~v~~~d~~~~~~--~~~~~~g----~~~---~~~~~e~~~~~d~vi~~v 66 (296)
T PRK11559 3 MKVGFIGL-GIMGKPMSKNLLKAGY--SLVVYDRNPEAV--AEVIAAG----AET---ASTAKAVAEQCDVIITML 66 (296)
T ss_pred ceEEEEcc-CHHHHHHHHHHHHCCC--eEEEEcCCHHHH--HHHHHCC----Cee---cCCHHHHHhcCCEEEEeC
Confidence 68999999 9999999999998887 899999876221 1122211 111 235678889999999984
No 247
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=97.02 E-value=0.021 Score=51.66 Aligned_cols=115 Identities=21% Similarity=0.300 Sum_probs=65.2
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc---hhHHHHHhcCCCCCeEEEEe-CCCc---HHhh-------
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTGAVVRGFL-GQPQ---LENA------- 107 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~---~g~~~dl~~~~~~~~v~~~~-~~~d---~~~a------- 107 (354)
.++|+|+||+|++|+.++..|+..|. +|++...+.. .....++.... ..+..+. +-.+ +.++
T Consensus 5 ~~~vlItG~sg~iG~~l~~~l~~~G~--~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~ 80 (248)
T PRK05557 5 GKVALVTGASRGIGRAIAERLAAQGA--NVVINYASSEAGAEALVAEIGALG--GKALAVQGDVSDAESVERAVDEAKAE 80 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCchhHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 46899999999999999999999887 7766665542 12222232221 1111110 1112 2222
Q ss_pred hCCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHhhhC---CCeEEEEecC
Q 018512 108 LTGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKCC---PNATVNLISN 160 (354)
Q Consensus 108 l~~aDvVIi~ag~~~~~---g~~r---~d~~~~n~~~~~~i~~~i~~~~---p~a~viv~tN 160 (354)
+.+.|.||+++|..... ..+. ...+..|+.....+.+.+.++. ..+.++++|.
T Consensus 81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss 142 (248)
T PRK05557 81 FGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISS 142 (248)
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcc
Confidence 24689999998864321 1122 2234567777667777666543 2345555553
No 248
>PRK06545 prephenate dehydrogenase; Validated
Probab=97.02 E-value=0.0046 Score=60.55 Aligned_cols=68 Identities=21% Similarity=0.243 Sum_probs=46.4
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 118 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a 118 (354)
.||+|||. |.+|.+++..|...++ ++.++|.+.............. ... .++++.+++++||+||++.
T Consensus 1 ~~I~iIG~-GliG~siA~~L~~~G~--~v~i~~~~~~~~~~~~a~~~~~---~~~--~~~~~~~~~~~aDlVilav 68 (359)
T PRK06545 1 RTVLIVGL-GLIGGSLALAIKAAGP--DVFIIGYDPSAAQLARALGFGV---IDE--LAADLQRAAAEADLIVLAV 68 (359)
T ss_pred CeEEEEEe-CHHHHHHHHHHHhcCC--CeEEEEeCCCHHHHHHHhcCCC---Ccc--cccCHHHHhcCCCEEEEeC
Confidence 37999999 9999999999999887 7788888763211111111111 111 1245678899999999984
No 249
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.01 E-value=0.014 Score=53.18 Aligned_cols=147 Identities=10% Similarity=0.016 Sum_probs=77.0
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEE----eCCCcHHhhhC-------C
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGF----LGQPQLENALT-------G 110 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~----~~~~d~~~al~-------~ 110 (354)
.++|.|+||+|.+|++++..|+..|. +|++.+.+... ...++.+... ..+..+ ....++.++++ .
T Consensus 5 ~k~ilItGas~gIG~~la~~l~~~G~--~vv~~~~~~~~-~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 80 (253)
T PRK08642 5 EQTVLVTGGSRGLGAAIARAFAREGA--RVVVNYHQSED-AAEALADELG-DRAIALQADVTDREQVQAMFATATEHFGK 80 (253)
T ss_pred CCEEEEeCCCCcHHHHHHHHHHHCCC--eEEEEcCCCHH-HHHHHHHHhC-CceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 35899999999999999999999887 78776654311 1111111100 111111 11112233332 2
Q ss_pred -CcEEEEcCCCCCC---------CCCCH---HHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecCCCCCchHHHHHHHH
Q 018512 111 -MDLVIIPAGVPRK---------PGMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISNPVNSTVPIAAEVFK 174 (354)
Q Consensus 111 -aDvVIi~ag~~~~---------~g~~r---~d~~~~n~~~~~~i~~~i~~~---~p~a~viv~tNPv~~~~~~~~~~~~ 174 (354)
.|++|+.+|.... ...+. .+.+..|+.....+.+.+.++ ...+.|++++......
T Consensus 81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~--------- 151 (253)
T PRK08642 81 PITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQN--------- 151 (253)
T ss_pred CCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccC---------
Confidence 8999999875211 11122 233555655555555444321 2245666665432111
Q ss_pred HhCCCCCCCEEEeccchHHHHHHHHHHHhC
Q 018512 175 KAGTYDPKKLLGVTMLDVVRANTFVAEVLG 204 (354)
Q Consensus 175 ~~~~~p~~kviG~t~ld~~r~~~~la~~l~ 204 (354)
..++.-.++.+.....++.+.+|+.++
T Consensus 152 ---~~~~~~~Y~~sK~a~~~l~~~la~~~~ 178 (253)
T PRK08642 152 ---PVVPYHDYTTAKAALLGLTRNLAAELG 178 (253)
T ss_pred ---CCCCccchHHHHHHHHHHHHHHHHHhC
Confidence 122223466665556667777787765
No 250
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=97.01 E-value=0.012 Score=54.08 Aligned_cols=144 Identities=17% Similarity=0.113 Sum_probs=77.5
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc-hhHHHHHhcCCCCCeEEEE-eCCCc---HHhh-------h
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGF-LGQPQ---LENA-------L 108 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~-~g~~~dl~~~~~~~~v~~~-~~~~d---~~~a-------l 108 (354)
+.+++.|+||+|.+|++++..|+..|. +|+++|+++. .....++.... ..+..+ .+-++ ..++ +
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGA--RVVLVDRSELVHEVAAELRAAG--GEALALTADLETYAGAQAAMAAAVEAF 82 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCchHHHHHHHHHHhcC--CeEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence 346899999999999999999999987 8999998752 22222332221 111111 11112 2222 2
Q ss_pred CCCcEEEEcCCCCC--CC--CCCHH---HHHHHHH----HHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhC
Q 018512 109 TGMDLVIIPAGVPR--KP--GMTRD---DLFNINA----GIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAG 177 (354)
Q Consensus 109 ~~aDvVIi~ag~~~--~~--g~~r~---d~~~~n~----~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~ 177 (354)
...|++|+.||... .+ ..+.. ..+..|+ ...+.+.+.+++... +.|+++|.....
T Consensus 83 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-g~iv~~sS~~~~------------- 148 (260)
T PRK12823 83 GRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGG-GAIVNVSSIATR------------- 148 (260)
T ss_pred CCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC-CeEEEEcCcccc-------------
Confidence 46899999987432 11 12222 2234444 344566666655433 455555432110
Q ss_pred CCCCCCEEEeccchHHHHHHHHHHHh
Q 018512 178 TYDPKKLLGVTMLDVVRANTFVAEVL 203 (354)
Q Consensus 178 ~~p~~kviG~t~ld~~r~~~~la~~l 203 (354)
+ +..-.++.+......+.+.++..+
T Consensus 149 ~-~~~~~Y~~sK~a~~~~~~~la~e~ 173 (260)
T PRK12823 149 G-INRVPYSAAKGGVNALTASLAFEY 173 (260)
T ss_pred C-CCCCccHHHHHHHHHHHHHHHHHh
Confidence 0 111235555444455667777766
No 251
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=97.00 E-value=0.019 Score=53.48 Aligned_cols=36 Identities=19% Similarity=0.232 Sum_probs=32.0
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 78 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~ 78 (354)
+.+++.|+||+|.+|+.++..|+..|. .|+++|++.
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~--~V~~~~r~~ 44 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGA--KVAILDRNQ 44 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCH
Confidence 345899999999999999999999888 899999875
No 252
>PRK06197 short chain dehydrogenase; Provisional
Probab=96.99 E-value=0.013 Score=55.52 Aligned_cols=117 Identities=21% Similarity=0.148 Sum_probs=66.7
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCch--hHHHHHhcCCCCCeEEEEe-CCCc---HHhh-------
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFL-GQPQ---LENA------- 107 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~--g~~~dl~~~~~~~~v~~~~-~~~d---~~~a------- 107 (354)
+.++|.|+||+|.+|+.++..|+..|. +|++++++... ....++........+..+. +-.| .+++
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~--~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 92 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGA--HVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAA 92 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhh
Confidence 446899999999999999999999887 89999987522 1222333211111222211 1112 1222
Q ss_pred hCCCcEEEEcCCCCCCCC-C---CHHHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecC
Q 018512 108 LTGMDLVIIPAGVPRKPG-M---TRDDLFNINAGI----VRTLCEGIAKCCPNATVNLISN 160 (354)
Q Consensus 108 l~~aDvVIi~ag~~~~~g-~---~r~d~~~~n~~~----~~~i~~~i~~~~p~a~viv~tN 160 (354)
+...|+||+.||...... . .....+..|+.. .+.+.+.+++.. .+.|+++|.
T Consensus 93 ~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS 152 (306)
T PRK06197 93 YPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVP-GSRVVTVSS 152 (306)
T ss_pred CCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCC-CCEEEEECC
Confidence 236899999998632211 1 112234555544 666777666543 345565553
No 253
>PRK06500 short chain dehydrogenase; Provisional
Probab=96.99 E-value=0.012 Score=53.47 Aligned_cols=101 Identities=20% Similarity=0.189 Sum_probs=62.0
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEE-eCCCcH----------Hhhh
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGF-LGQPQL----------ENAL 108 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~-~~~~d~----------~~al 108 (354)
.++|.|+||+|.+|+.++..|+..|. +|++++++.. .....++ . ..+..+ .+..+. .+.+
T Consensus 6 ~k~vlItGasg~iG~~la~~l~~~g~--~v~~~~r~~~~~~~~~~~~---~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (249)
T PRK06500 6 GKTALITGGTSGIGLETARQFLAEGA--RVAITGRDPASLEAARAEL---G--ESALVIRADAGDVAAQKALAQALAEAF 78 (249)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEecCCHHHHHHHHHHh---C--CceEEEEecCCCHHHHHHHHHHHHHHh
Confidence 45899999999999999999999987 8999998752 1111111 1 111111 111121 1223
Q ss_pred CCCcEEEEcCCCCCCCC---CCH---HHHHHHHHHHHHHHHHHHhhh
Q 018512 109 TGMDLVIIPAGVPRKPG---MTR---DDLFNINAGIVRTLCEGIAKC 149 (354)
Q Consensus 109 ~~aDvVIi~ag~~~~~g---~~r---~d~~~~n~~~~~~i~~~i~~~ 149 (354)
...|+||+.+|...... .+. ...+..|+.....+.+.+.++
T Consensus 79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 125 (249)
T PRK06500 79 GRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPL 125 (249)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 57899999988643211 122 234567777777777777653
No 254
>PRK06949 short chain dehydrogenase; Provisional
Probab=96.99 E-value=0.0075 Score=55.28 Aligned_cols=37 Identities=19% Similarity=0.212 Sum_probs=32.5
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512 40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 78 (354)
Q Consensus 40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~ 78 (354)
...++|.|+||+|.+|++++..|+..|. +|++.+++.
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~--~Vi~~~r~~ 43 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGA--KVVLASRRV 43 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCH
Confidence 3456999999999999999999998887 899999875
No 255
>PRK05993 short chain dehydrogenase; Provisional
Probab=96.99 E-value=0.0072 Score=56.50 Aligned_cols=112 Identities=12% Similarity=0.062 Sum_probs=64.6
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEE-EeCCCcHHhhh--------CCCcE
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENAL--------TGMDL 113 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~~~d~~~al--------~~aDv 113 (354)
++|.|+||+|.+|..++..|+..|. +|++.+++... ..++..... ..+.. +....+++.++ ...|+
T Consensus 5 k~vlItGasggiG~~la~~l~~~G~--~Vi~~~r~~~~--~~~l~~~~~-~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~ 79 (277)
T PRK05993 5 RSILITGCSSGIGAYCARALQSDGW--RVFATCRKEED--VAALEAEGL-EAFQLDYAEPESIAALVAQVLELSGGRLDA 79 (277)
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHH--HHHHHHCCc-eEEEccCCCHHHHHHHHHHHHHHcCCCccE
Confidence 4799999999999999999999887 89999987521 112222111 01111 11111122222 24699
Q ss_pred EEEcCCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecC
Q 018512 114 VIIPAGVPRKP---GMT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISN 160 (354)
Q Consensus 114 VIi~ag~~~~~---g~~---r~d~~~~n~~~----~~~i~~~i~~~~p~a~viv~tN 160 (354)
||+.||..... ..+ ....+..|+.. .+.+.+.+++... +.|+++|.
T Consensus 80 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~-g~iv~isS 135 (277)
T PRK05993 80 LFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQ-GRIVQCSS 135 (277)
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCC-CEEEEECC
Confidence 99998864321 112 22345566655 6667777765543 44555553
No 256
>PRK08628 short chain dehydrogenase; Provisional
Probab=96.99 E-value=0.026 Score=51.86 Aligned_cols=115 Identities=13% Similarity=0.122 Sum_probs=65.4
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc-hhHHHHHhcCCCCCeEEEE-eCCCc---HHhhh-------
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGF-LGQPQ---LENAL------- 108 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~-~g~~~dl~~~~~~~~v~~~-~~~~d---~~~al------- 108 (354)
+..+|.|+||+|.+|..++..|+..|. .+++.++++. .....++.... ..+..+ .+-++ +..++
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGA--IPVIFGRSAPDDEFAEELRALQ--PRAEFVQVDLTDDAQCRDAVEQTVAKF 81 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC--cEEEEcCChhhHHHHHHHHhcC--CceEEEEccCCCHHHHHHHHHHHHHhc
Confidence 345899999999999999999999887 7888888762 22223333222 112221 11112 22333
Q ss_pred CCCcEEEEcCCCCCCCC--C---CHHHHHHHHHHHHHHHHHHHhhhC--CCeEEEEec
Q 018512 109 TGMDLVIIPAGVPRKPG--M---TRDDLFNINAGIVRTLCEGIAKCC--PNATVNLIS 159 (354)
Q Consensus 109 ~~aDvVIi~ag~~~~~g--~---~r~d~~~~n~~~~~~i~~~i~~~~--p~a~viv~t 159 (354)
...|+||+++|...... . +..+.+..|+.....+.+.+.++. ..+.++++|
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~s 139 (258)
T PRK08628 82 GRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNIS 139 (258)
T ss_pred CCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEEC
Confidence 36799999998643222 1 122345667665555555544322 234455444
No 257
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.99 E-value=0.012 Score=53.42 Aligned_cols=103 Identities=21% Similarity=0.288 Sum_probs=59.0
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEE-ecCCc--hhHHHHHhcCCCCCeEEEEe-CCCc---HHhhhC-----
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLY-DVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENALT----- 109 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~-D~~~~--~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al~----- 109 (354)
+++|.|+||+|.+|..++..|+..|. ++++. +++.. ......+.... ..+.... +-.+ +.+.++
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~--~v~~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGA--KVVIAYDINEEAAQELLEEIKEEG--GDAIAVKADVSSEEDVENLVEQIVEK 80 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhcC--CeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 45899999999999999999998887 77777 88652 11222232211 1222211 1112 222232
Q ss_pred --CCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHhh
Q 018512 110 --GMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAK 148 (354)
Q Consensus 110 --~aDvVIi~ag~~~~~---g~~r---~d~~~~n~~~~~~i~~~i~~ 148 (354)
+.|+||+.+|..... ..+. ...+..|......+.+.+..
T Consensus 81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 127 (247)
T PRK05565 81 FGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALP 127 (247)
T ss_pred hCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 789999998865211 1122 23455677665555555443
No 258
>COG0677 WecC UDP-N-acetyl-D-mannosaminuronate dehydrogenase [Cell envelope biogenesis, outer membrane]
Probab=96.98 E-value=0.0091 Score=58.35 Aligned_cols=124 Identities=17% Similarity=0.225 Sum_probs=75.3
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc------hhHH----HHHh----cCCCCCeEEEEeCCCcHHhh
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT------PGVT----ADIS----HMDTGAVVRGFLGQPQLENA 107 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~------~g~~----~dl~----~~~~~~~v~~~~~~~d~~~a 107 (354)
.++|+|||- |+||..+|..++.+|. .|+-+|+++. .|.. .++. .......++. |+|. +.
T Consensus 9 ~~~I~ViGL-GYVGLPlA~~fA~~G~--~ViG~DIn~~~Vd~ln~G~~~i~e~~~~~~v~~~v~~g~lra---Ttd~-~~ 81 (436)
T COG0677 9 SATIGVIGL-GYVGLPLAAAFASAGF--KVIGVDINQKKVDKLNRGESYIEEPDLDEVVKEAVESGKLRA---TTDP-EE 81 (436)
T ss_pred ceEEEEEcc-ccccHHHHHHHHHcCC--ceEeEeCCHHHHHHHhCCcceeecCcHHHHHHHHHhcCCceE---ecCh-hh
Confidence 369999999 9999999999999998 8999999861 1110 0111 1111233554 4565 55
Q ss_pred hCCCcEEEEcCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHhhhCCCe--EEEEecCCCCCchHHHHHHHHHhCCC
Q 018512 108 LTGMDLVIIPAGVPRKPG-MTRDDLFNINAGIVRTLCEGIAKCCPNA--TVNLISNPVNSTVPIAAEVFKKAGTY 179 (354)
Q Consensus 108 l~~aDvVIi~ag~~~~~g-~~r~d~~~~n~~~~~~i~~~i~~~~p~a--~viv~tNPv~~~~~~~~~~~~~~~~~ 179 (354)
++.||++|++.-.|.+.. +..+ ..+.+-++.|.++-.++ +|+=.|-|.+..-.++--.+...+|+
T Consensus 82 l~~~dv~iI~VPTPl~~~~~pDl-------s~v~~aa~sIa~~L~kG~LVIlEST~~PGTTe~v~~plle~~sgL 149 (436)
T COG0677 82 LKECDVFIICVPTPLKKYREPDL-------SYVESAARSIAPVLKKGDLVILESTTPPGTTEEVVKPLLEERSGL 149 (436)
T ss_pred cccCCEEEEEecCCcCCCCCCCh-------HHHHHHHHHHHHhcCCCCEEEEecCCCCCcHHHHHHHHHhhcCCC
Confidence 789999999987775442 2222 34445555555554333 33334778776654432223333444
No 259
>PRK07825 short chain dehydrogenase; Provisional
Probab=96.98 E-value=0.019 Score=53.29 Aligned_cols=113 Identities=18% Similarity=0.139 Sum_probs=63.9
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEE-EeCCCcH-------HhhhCCC
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRG-FLGQPQL-------ENALTGM 111 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~-~~~~~d~-------~~al~~a 111 (354)
.++|.|+||+|.+|..++..|+..|. .|++.++++. .....++.... .+.. +....++ .+.+.+.
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~---~~~~D~~~~~~~~~~~~~~~~~~~~i 79 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGA--RVAIGDLDEALAKETAAELGLVV---GGPLDVTDPASFAAFLDAVEADLGPI 79 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHhccce---EEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 35899999999999999999999887 7999998752 21222222110 0110 1011111 2223578
Q ss_pred cEEEEcCCCCCCCC---CC---HHHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecC
Q 018512 112 DLVIIPAGVPRKPG---MT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISN 160 (354)
Q Consensus 112 DvVIi~ag~~~~~g---~~---r~d~~~~n~~~----~~~i~~~i~~~~p~a~viv~tN 160 (354)
|++|+.+|...... .+ ....+.-|+.. .+.+.+.+.+.+ .+.|+++|.
T Consensus 80 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~g~iv~isS 137 (273)
T PRK07825 80 DVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRG-RGHVVNVAS 137 (273)
T ss_pred CEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CCEEEEEcC
Confidence 99999998643211 11 22344556553 444455554433 455666654
No 260
>PRK06198 short chain dehydrogenase; Provisional
Probab=96.98 E-value=0.02 Score=52.63 Aligned_cols=115 Identities=14% Similarity=0.166 Sum_probs=64.2
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcE-EEEEecCCc--hhHHHHHhcCCCCCeEEEE-eCCCc---HHhh-------
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSV-LHLYDVVNT--PGVTADISHMDTGAVVRGF-LGQPQ---LENA------- 107 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~e-i~L~D~~~~--~g~~~dl~~~~~~~~v~~~-~~~~d---~~~a------- 107 (354)
.++|.|+||+|.+|..++..|...|. + |+++|++.. .....++.... ..+..+ .+-.+ +.++
T Consensus 6 ~k~vlItGa~g~iG~~la~~l~~~G~--~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (260)
T PRK06198 6 GKVALVTGGTQGLGAAIARAFAERGA--AGLVICGRNAEKGEAQAAELEALG--AKAVFVQADLSDVEDCRRVVAAADEA 81 (260)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCC--CeEEEEcCCHHHHHHHHHHHHhcC--CeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 45899999999999999999998886 5 999998752 22222332221 122111 11122 2222
Q ss_pred hCCCcEEEEcCCCCCCC---CCCHH---HHHHHHHHHHHHH----HHHHhhhCCCeEEEEecC
Q 018512 108 LTGMDLVIIPAGVPRKP---GMTRD---DLFNINAGIVRTL----CEGIAKCCPNATVNLISN 160 (354)
Q Consensus 108 l~~aDvVIi~ag~~~~~---g~~r~---d~~~~n~~~~~~i----~~~i~~~~p~a~viv~tN 160 (354)
+.+.|+||+++|..... ..+.. ..+..|+.....+ .+.+.+....+.++++|.
T Consensus 82 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss 144 (260)
T PRK06198 82 FGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGS 144 (260)
T ss_pred hCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECC
Confidence 23689999999865321 12222 2345555544444 444444333455665553
No 261
>PRK08226 short chain dehydrogenase; Provisional
Probab=96.98 E-value=0.015 Score=53.50 Aligned_cols=115 Identities=21% Similarity=0.256 Sum_probs=65.0
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC-chhHHHHHhcCCCCCeEEEEe-CCCc---HHhh-------h
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFL-GQPQ---LENA-------L 108 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~-~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~a-------l 108 (354)
+.+++.|+||+|.+|+.++..|+..|. +|++++++. ......++.... ..+..+. +-++ +.++ +
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 80 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGA--NLILLDISPEIEKLADELCGRG--HRCTAVVADVRDPASVAAAIKRAKEKE 80 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEecCCHHHHHHHHHHHHhC--CceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 346899999999999999999999887 899999875 222222232211 1121111 1122 2222 2
Q ss_pred CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhh---CCCeEEEEec
Q 018512 109 TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLIS 159 (354)
Q Consensus 109 ~~aDvVIi~ag~~~~~---g~~---r~d~~~~n~~~~~~i~~~i~~~---~p~a~viv~t 159 (354)
...|+||+.+|..... ..+ ....+..|+.....+.+.+.++ ...+.++++|
T Consensus 81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~is 140 (263)
T PRK08226 81 GRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMS 140 (263)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEC
Confidence 3579999999863211 111 2234556766655555554432 1234455554
No 262
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=96.98 E-value=0.0075 Score=56.30 Aligned_cols=98 Identities=23% Similarity=0.261 Sum_probs=63.0
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhC-CCcEEEEcCCCCCC
Q 018512 45 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT-GMDLVIIPAGVPRK 123 (354)
Q Consensus 45 I~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~-~aDvVIi~ag~~~~ 123 (354)
|+|+||+|+||+++...|...++ +|..+-++..... ...+.. +... +.+.+... ++|+||..||.|--
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh--~v~iltR~~~~~~--~~~~~~----v~~~---~~~~~~~~~~~DavINLAG~~I~ 69 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGH--QVTILTRRPPKAS--QNLHPN----VTLW---EGLADALTLGIDAVINLAGEPIA 69 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCC--eEEEEEcCCcchh--hhcCcc----cccc---chhhhcccCCCCEEEECCCCccc
Confidence 68999999999999999999998 8888888763211 111111 1111 11223333 79999999998732
Q ss_pred ---CCCC-HHHHHHHHHHHHHHHHHHHhhhCCCe
Q 018512 124 ---PGMT-RDDLFNINAGIVRTLCEGIAKCCPNA 153 (354)
Q Consensus 124 ---~g~~-r~d~~~~n~~~~~~i~~~i~~~~p~a 153 (354)
+... ......--+...+.+.+.|.+.....
T Consensus 70 ~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P 103 (297)
T COG1090 70 ERRWTEKQKEEIRQSRINTTEKLVELIAASETKP 103 (297)
T ss_pred cccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCC
Confidence 3222 23334445777888888888665443
No 263
>PRK08339 short chain dehydrogenase; Provisional
Probab=96.97 E-value=0.056 Score=50.16 Aligned_cols=114 Identities=13% Similarity=0.124 Sum_probs=66.5
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEE----eCCCcHHhhh------CC
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF----LGQPQLENAL------TG 110 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~----~~~~d~~~al------~~ 110 (354)
+.+.|+||+|.+|..++..|+..|. +|++.|++. ......++.... ...+..+ ....+.++.+ ..
T Consensus 9 k~~lItGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~ 85 (263)
T PRK08339 9 KLAFTTASSKGIGFGVARVLARAGA--DVILLSRNEENLKKAREKIKSES-NVDVSYIVADLTKREDLERTVKELKNIGE 85 (263)
T ss_pred CEEEEeCCCCcHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhc-CCceEEEEecCCCHHHHHHHHHHHHhhCC
Confidence 4789999999999999999999997 899999875 222233333211 1112211 1111222222 35
Q ss_pred CcEEEEcCCCCCCC---CCCHH---HHHHHH----HHHHHHHHHHHhhhCCCeEEEEecC
Q 018512 111 MDLVIIPAGVPRKP---GMTRD---DLFNIN----AGIVRTLCEGIAKCCPNATVNLISN 160 (354)
Q Consensus 111 aDvVIi~ag~~~~~---g~~r~---d~~~~n----~~~~~~i~~~i~~~~p~a~viv~tN 160 (354)
.|++|+.+|..... ..+.. ..+.-| +...+.+.+.+++.. .+.||++|.
T Consensus 86 iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~-~g~Ii~isS 144 (263)
T PRK08339 86 PDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKG-FGRIIYSTS 144 (263)
T ss_pred CcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEcC
Confidence 89999999865321 12222 223344 445667777776543 456666654
No 264
>PF11975 Glyco_hydro_4C: Family 4 glycosyl hydrolase C-terminal domain; InterPro: IPR022616 This domain is found primarily in bacterial family 4 glycosyl hydrolases. It is found in the C terminus. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds; PDB: 1UP4_A 1UP6_C 1UP7_E 1VJT_A 1U8X_X 1S6Y_A 3FEF_D 1OBB_A.
Probab=96.97 E-value=0.0056 Score=56.23 Aligned_cols=78 Identities=10% Similarity=0.062 Sum_probs=52.4
Q ss_pred CcchhhHHHHHHHHHHHHHhccCCCCcEEEeee-eeccC---CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHH
Q 018512 263 GSATLSMAYAAVKFADACLRGLRGDAGVVECAF-VASQV---TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAK 338 (354)
Q Consensus 263 g~~~~s~A~a~~~ii~si~~~~~~~~~v~~~~~-~~g~~---~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa 338 (354)
++..|+ . .++++|.+|.+ .++.+++ .+|.+ |+|.++++||+|+++|+.++.. ++|++...++++...
T Consensus 134 ~~~~~a--~---~~i~~i~~~~~---~~~~vNv~N~G~I~nLp~davVEvp~~v~~~Gi~P~~~-g~lP~~~~~li~~~~ 204 (232)
T PF11975_consen 134 GSGEYA--E---AAIEAIYNDKP---KRFVVNVPNNGAIPNLPDDAVVEVPCYVDGDGIHPVAV-GPLPPAIAGLIQQVK 204 (232)
T ss_dssp TTSCHH--H---HHHHHHHHSSE---EEEEEEEE-TTSSTTS-TTSEEEEEEEEETTEEEEB-S-B---HHHHHHHHHHH
T ss_pred cccchH--H---HHHHHHhcCCC---eEEEEECCCCCccCCCCCCcEEEEEEEEcCCeeEeccC-CCCCHHHHHHHHHHH
Confidence 455555 3 44555577754 3555654 47876 8899999999999999999766 699999999888876
Q ss_pred HHHHHHHHHhh
Q 018512 339 KELAGSIQKGI 349 (354)
Q Consensus 339 ~~i~~~~~~~~ 349 (354)
..-+-.++.++
T Consensus 205 ~~e~L~veAa~ 215 (232)
T PF11975_consen 205 AYERLTVEAAL 215 (232)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 66666665554
No 265
>PRK08263 short chain dehydrogenase; Provisional
Probab=96.95 E-value=0.0051 Score=57.37 Aligned_cols=111 Identities=15% Similarity=0.014 Sum_probs=62.5
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEE-eCCCc---HHhh-------hCCC
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGF-LGQPQ---LENA-------LTGM 111 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~-~~~~d---~~~a-------l~~a 111 (354)
++|.|+||+|.+|++++..|+..|. +|++.+++.... .++.+... ..+..+ .+-++ +.+. +...
T Consensus 4 k~vlItGasg~iG~~~a~~l~~~g~--~V~~~~r~~~~~--~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 78 (275)
T PRK08263 4 KVWFITGASRGFGRAWTEAALERGD--RVVATARDTATL--ADLAEKYG-DRLLPLALDVTDRAAVFAAVETAVEHFGRL 78 (275)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCC--EEEEEECCHHHH--HHHHHhcc-CCeeEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4799999999999999999999887 899999875211 11111100 011111 01112 1122 2467
Q ss_pred cEEEEcCCCCCCCC---CC---HHHHHHHHHHH----HHHHHHHHhhhCCCeEEEEec
Q 018512 112 DLVIIPAGVPRKPG---MT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLIS 159 (354)
Q Consensus 112 DvVIi~ag~~~~~g---~~---r~d~~~~n~~~----~~~i~~~i~~~~p~a~viv~t 159 (354)
|.||+++|...... .+ ....+..|+.. .+.+.+.+++.... .++++|
T Consensus 79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-~iv~vs 135 (275)
T PRK08263 79 DIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSG-HIIQIS 135 (275)
T ss_pred CEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC-EEEEEc
Confidence 99999998753211 12 23345566655 45555555555444 444444
No 266
>PRK06398 aldose dehydrogenase; Validated
Probab=96.95 E-value=0.015 Score=53.85 Aligned_cols=148 Identities=13% Similarity=0.136 Sum_probs=80.2
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEE-EeCCCcHHhh-------hCCCcE
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENA-------LTGMDL 113 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~~~d~~~a-------l~~aDv 113 (354)
.+++.|+||+|.+|.+++..|+..|. +|+++|++..... .. ..+.. .....+.+++ +...|+
T Consensus 6 gk~vlItGas~gIG~~ia~~l~~~G~--~Vi~~~r~~~~~~-----~~---~~~~~D~~~~~~i~~~~~~~~~~~~~id~ 75 (258)
T PRK06398 6 DKVAIVTGGSQGIGKAVVNRLKEEGS--NVINFDIKEPSYN-----DV---DYFKVDVSNKEQVIKGIDYVISKYGRIDI 75 (258)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--eEEEEeCCccccC-----ce---EEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 45899999999999999999999987 8999998652110 00 00000 0011122222 346899
Q ss_pred EEEcCCCCCCC---CCCH---HHHHHHHHHHH----HHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCC
Q 018512 114 VIIPAGVPRKP---GMTR---DDLFNINAGIV----RTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKK 183 (354)
Q Consensus 114 VIi~ag~~~~~---g~~r---~d~~~~n~~~~----~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~k 183 (354)
+|+.||..... ..+. ...+..|+... +.+.+.+++. ..+.|+++|.-... .+.|..-
T Consensus 76 li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~isS~~~~------------~~~~~~~ 142 (258)
T PRK06398 76 LVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQ-DKGVIINIASVQSF------------AVTRNAA 142 (258)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCeEEEEeCcchhc------------cCCCCCc
Confidence 99999864321 1122 23345565544 4444444433 34566666532111 1233334
Q ss_pred EEEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512 184 LLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV 215 (354)
Q Consensus 184 viG~t~ld~~r~~~~la~~l~v~~~~v~~~v~ 215 (354)
.++.+......+.+.++..++ +. |++..+
T Consensus 143 ~Y~~sKaal~~~~~~la~e~~--~~-i~vn~i 171 (258)
T PRK06398 143 AYVTSKHAVLGLTRSIAVDYA--PT-IRCVAV 171 (258)
T ss_pred hhhhhHHHHHHHHHHHHHHhC--CC-CEEEEE
Confidence 455544334456677777664 22 544444
No 267
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=96.95 E-value=0.0051 Score=58.33 Aligned_cols=72 Identities=22% Similarity=0.295 Sum_probs=51.1
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEc
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP 117 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ 117 (354)
+..||+|+|+ |.+|.+++..|...|. .+|.++|++. ++..+.++.+.. +..... ...+++++++++|+||.+
T Consensus 126 ~~k~vlIlGa-GGaaraia~aL~~~G~-~~I~I~nR~~~ka~~la~~l~~~~--~~~~~~-~~~~~~~~~~~aDiVIna 199 (284)
T PRK12549 126 SLERVVQLGA-GGAGAAVAHALLTLGV-ERLTIFDVDPARAAALADELNARF--PAARAT-AGSDLAAALAAADGLVHA 199 (284)
T ss_pred cCCEEEEECC-cHHHHHHHHHHHHcCC-CEEEEECCCHHHHHHHHHHHHhhC--CCeEEE-eccchHhhhCCCCEEEEC
Confidence 4468999999 9999999999998885 4799999986 344455554432 112221 123445678999999997
No 268
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=96.95 E-value=0.013 Score=62.19 Aligned_cols=117 Identities=21% Similarity=0.263 Sum_probs=65.3
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEE-eCCC---cHHhhhC-----
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF-LGQP---QLENALT----- 109 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~-~~~~---d~~~al~----- 109 (354)
..++|.|+||+|.+|..++..|+..|. +|++.|++. ......++........+..+ .+-+ +..++++
T Consensus 413 ~gkvvLVTGasggIG~aiA~~La~~Ga--~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~ 490 (676)
T TIGR02632 413 ARRVAFVTGGAGGIGRETARRLAAEGA--HVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALA 490 (676)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCC--EEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence 346899999999999999999999887 899999875 22222333211100111111 1111 2233333
Q ss_pred --CCcEEEEcCCCCCCC---CCCHHH---HHHHHHH----HHHHHHHHHhhhCCCeEEEEec
Q 018512 110 --GMDLVIIPAGVPRKP---GMTRDD---LFNINAG----IVRTLCEGIAKCCPNATVNLIS 159 (354)
Q Consensus 110 --~aDvVIi~ag~~~~~---g~~r~d---~~~~n~~----~~~~i~~~i~~~~p~a~viv~t 159 (354)
+.|+||++||..... ..+..+ .+..|+. ..+...+.+++.+..+.|+++|
T Consensus 491 ~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iS 552 (676)
T TIGR02632 491 YGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIA 552 (676)
T ss_pred cCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 689999999864321 112111 2223332 3445566666554445555544
No 269
>PRK07985 oxidoreductase; Provisional
Probab=96.95 E-value=0.041 Score=52.10 Aligned_cols=117 Identities=18% Similarity=0.140 Sum_probs=67.0
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc----hhHHHHHhcCCCCCeEEEE-eCCCcH----------
Q 018512 40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT----PGVTADISHMDTGAVVRGF-LGQPQL---------- 104 (354)
Q Consensus 40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~----~g~~~dl~~~~~~~~v~~~-~~~~d~---------- 104 (354)
.+.+++.|+||+|.+|.+++..|+..|. +|++.+++.. ......+.... ..+..+ .+-++.
T Consensus 47 ~~~k~vlITGas~gIG~aia~~L~~~G~--~Vi~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~ 122 (294)
T PRK07985 47 LKDRKALVTGGDSGIGRAAAIAYAREGA--DVAISYLPVEEEDAQDVKKIIEECG--RKAVLLPGDLSDEKFARSLVHEA 122 (294)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCC--EEEEecCCcchhhHHHHHHHHHHcC--CeEEEEEccCCCHHHHHHHHHHH
Confidence 3446899999999999999999999987 8888876531 11111122211 112111 111221
Q ss_pred HhhhCCCcEEEEcCCCCCC--C--CCCH---HHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecC
Q 018512 105 ENALTGMDLVIIPAGVPRK--P--GMTR---DDLFNINAGIVRTLCEGIAKCC-PNATVNLISN 160 (354)
Q Consensus 105 ~~al~~aDvVIi~ag~~~~--~--g~~r---~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tN 160 (354)
.+.+...|++|+.+|.... + ..+. ...+..|+.....+.+.+..+- ..+.||++|.
T Consensus 123 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS 186 (294)
T PRK07985 123 HKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSS 186 (294)
T ss_pred HHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECC
Confidence 1223567999999886321 1 1222 2345667766656665555432 3466776664
No 270
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=96.95 E-value=0.0055 Score=59.39 Aligned_cols=63 Identities=21% Similarity=0.338 Sum_probs=47.1
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512 40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 118 (354)
Q Consensus 40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a 118 (354)
-..++|+|||. |.+|+.+|..|...|. +|+.+|++.... .+. +. ...++++++++||+|+++.
T Consensus 144 l~g~~VgIIG~-G~IG~~vA~~L~~~G~--~V~~~d~~~~~~--~~~--------~~---~~~~l~ell~~aDiVil~l 206 (330)
T PRK12480 144 VKNMTVAIIGT-GRIGAATAKIYAGFGA--TITAYDAYPNKD--LDF--------LT---YKDSVKEAIKDADIISLHV 206 (330)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHhCCC--EEEEEeCChhHh--hhh--------hh---ccCCHHHHHhcCCEEEEeC
Confidence 35579999999 9999999999987776 999999875210 100 11 1235788999999999974
No 271
>PRK07035 short chain dehydrogenase; Provisional
Probab=96.93 E-value=0.011 Score=54.11 Aligned_cols=115 Identities=12% Similarity=0.106 Sum_probs=64.2
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEE-eCCCc---HHhh-------h
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF-LGQPQ---LENA-------L 108 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~-~~~~d---~~~a-------l 108 (354)
.++|.|+||+|.+|.+++..|...|. .|+++|++. ......++.+.. .....+ .+-.+ .+++ +
T Consensus 8 ~k~vlItGas~gIG~~l~~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (252)
T PRK07035 8 GKIALVTGASRGIGEAIAKLLAQQGA--HVIVSSRKLDGCQAVADAIVAAG--GKAEALACHIGEMEQIDALFAHIRERH 83 (252)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 35799999999999999999999887 899999875 222333343321 111111 11112 1222 2
Q ss_pred CCCcEEEEcCCCCC--C--CCCCH---HHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecC
Q 018512 109 TGMDLVIIPAGVPR--K--PGMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISN 160 (354)
Q Consensus 109 ~~aDvVIi~ag~~~--~--~g~~r---~d~~~~n~~~~~~i~~~i~~~---~p~a~viv~tN 160 (354)
...|+||+.+|... . ...+. ...+..|+.....+.+.+.++ ...+.+++++.
T Consensus 84 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS 145 (252)
T PRK07035 84 GRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVAS 145 (252)
T ss_pred CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECc
Confidence 35899999987421 1 11222 223455655554444444332 22355666553
No 272
>PRK07634 pyrroline-5-carboxylate reductase; Reviewed
Probab=96.93 E-value=0.0085 Score=55.07 Aligned_cols=70 Identities=10% Similarity=0.181 Sum_probs=45.7
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCC--CcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPL--VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 118 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~--~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a 118 (354)
+.+||+|||+ |.+|.+++..++..+. ..+++.++.+.. ....++.+.. .+.. +.++++.++++|+||++.
T Consensus 3 ~~~kI~iIG~-G~mg~ala~~l~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~---~~~~---~~~~~~~~~~~DiViiav 74 (245)
T PRK07634 3 KKHRILFIGA-GRMAEAIFSGLLKTSKEYIEEIIVSNRSNV-EKLDQLQARY---NVST---TTDWKQHVTSVDTIVLAM 74 (245)
T ss_pred CCCeEEEECc-CHHHHHHHHHHHhCCCCCcCeEEEECCCCH-HHHHHHHHHc---CcEE---eCChHHHHhcCCEEEEec
Confidence 3579999998 9999999999887752 334777876421 1122232211 1222 235677889999999983
No 273
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=96.93 E-value=0.003 Score=57.52 Aligned_cols=97 Identities=13% Similarity=0.166 Sum_probs=61.4
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEE-EeCCCcHHhhhCCCcEEEEcCCCCCC
Q 018512 45 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENALTGMDLVIIPAGVPRK 123 (354)
Q Consensus 45 I~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~~~d~~~al~~aDvVIi~ag~~~~ 123 (354)
|+|+||+|++|+.++..|+..+. +|..+=++........+.+... ..+.. +.....+.++++|+|.||++.+...
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~--~V~~l~R~~~~~~~~~l~~~g~-~vv~~d~~~~~~l~~al~g~d~v~~~~~~~~- 76 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGF--SVRALVRDPSSDRAQQLQALGA-EVVEADYDDPESLVAALKGVDAVFSVTPPSH- 76 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTG--CEEEEESSSHHHHHHHHHHTTT-EEEES-TT-HHHHHHHHTTCSEEEEESSCSC-
T ss_pred CEEECCccHHHHHHHHHHHhCCC--CcEEEEeccchhhhhhhhcccc-eEeecccCCHHHHHHHHcCCceEEeecCcch-
Confidence 78999999999999999999776 7777777653333344554432 11211 1111346788999999999865332
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHhhhCCCeE
Q 018512 124 PGMTRDDLFNINAGIVRTLCEGIAKCCPNAT 154 (354)
Q Consensus 124 ~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~ 154 (354)
.. -.+...++++++++.+-+-+
T Consensus 77 --~~-------~~~~~~~li~Aa~~agVk~~ 98 (233)
T PF05368_consen 77 --PS-------ELEQQKNLIDAAKAAGVKHF 98 (233)
T ss_dssp --CC-------HHHHHHHHHHHHHHHT-SEE
T ss_pred --hh-------hhhhhhhHHHhhhccccceE
Confidence 11 13455667777777765443
No 274
>PRK08269 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.92 E-value=0.0054 Score=59.01 Aligned_cols=111 Identities=15% Similarity=0.146 Sum_probs=70.7
Q ss_pred hHHHHHHHHHhCCCCcEEEEEecCCc--h--------hH--HHH----HhcCC---------CCCeEEEEeCCCcHHhhh
Q 018512 54 IGQPLAMLMKINPLVSVLHLYDVVNT--P--------GV--TAD----ISHMD---------TGAVVRGFLGQPQLENAL 108 (354)
Q Consensus 54 vG~~~a~~l~~~~~~~ei~L~D~~~~--~--------g~--~~d----l~~~~---------~~~~v~~~~~~~d~~~al 108 (354)
+|..+|..++..|+ +|+|+|.++. . +. +.+ +.... ....++.. .+.+.++++
T Consensus 1 MG~giA~~~a~~G~--~V~l~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~-~~~~~~~a~ 77 (314)
T PRK08269 1 MGQGIALAFAFAGH--DVTLIDFKPRDAAGWRALDAEARAEIERTLAALVALGRIDAAQADAVLARIAVV-ARDGAADAL 77 (314)
T ss_pred CcHHHHHHHHhCCC--eEEEEeCCcccchhhHHHHHHHHHHHHHHHHHHHHcCCCChhhHHHHHhCeEee-cCcchHHHh
Confidence 46889999999998 9999999871 1 11 111 11100 01234432 122466889
Q ss_pred CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe
Q 018512 109 TGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV 187 (354)
Q Consensus 109 ~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~ 187 (354)
++||+||.+. .++..+.+.+...+.+.+ |++++ +||.......-+ ...... +.|++|+
T Consensus 78 ~~aD~ViEav--------------~E~~~~K~~~f~~l~~~~~~~~il--aSntS~~~~~~l----a~~~~~-p~r~~g~ 136 (314)
T PRK08269 78 ADADLVFEAV--------------PEVLDAKREALRWLGRHVDADAII--ASTTSTFLVTDL----QRHVAH-PERFLNA 136 (314)
T ss_pred ccCCEEEECC--------------cCCHHHHHHHHHHHHhhCCCCcEE--EEccccCCHHHH----HhhcCC-cccEEEE
Confidence 9999999984 556778888888899988 56644 888877665332 232333 4678777
Q ss_pred c
Q 018512 188 T 188 (354)
Q Consensus 188 t 188 (354)
-
T Consensus 137 H 137 (314)
T PRK08269 137 H 137 (314)
T ss_pred e
Confidence 4
No 275
>PRK09242 tropinone reductase; Provisional
Probab=96.91 E-value=0.034 Score=51.03 Aligned_cols=116 Identities=17% Similarity=0.172 Sum_probs=65.2
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCc---H-------Hhhh
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---L-------ENAL 108 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d---~-------~~al 108 (354)
.+++.|+||+|.+|..++..|+..|. +|++.+++. .+....++........+..+. +-.+ . .+.+
T Consensus 9 ~k~~lItGa~~gIG~~~a~~l~~~G~--~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 86 (257)
T PRK09242 9 GQTALITGASKGIGLAIAREFLGLGA--DVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHW 86 (257)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 35899999999999999999999887 899999875 222333443321111222211 1111 1 2234
Q ss_pred CCCcEEEEcCCCCCC-C--CCCHH---HHHHHHHHHHHHHH----HHHhhhCCCeEEEEecC
Q 018512 109 TGMDLVIIPAGVPRK-P--GMTRD---DLFNINAGIVRTLC----EGIAKCCPNATVNLISN 160 (354)
Q Consensus 109 ~~aDvVIi~ag~~~~-~--g~~r~---d~~~~n~~~~~~i~----~~i~~~~p~a~viv~tN 160 (354)
...|+||+++|.... + ..+.. ..+..|+.....+. +.+++. +.+.++++|.
T Consensus 87 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~ii~~sS 147 (257)
T PRK09242 87 DGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQH-ASSAIVNIGS 147 (257)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCceEEEECc
Confidence 568999999986321 1 11222 23445555444444 444433 3355565553
No 276
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=96.91 E-value=0.01 Score=56.80 Aligned_cols=114 Identities=13% Similarity=0.060 Sum_probs=64.2
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEE-eCCCc---HHhhhC------
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGF-LGQPQ---LENALT------ 109 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~-~~~~d---~~~al~------ 109 (354)
.++|.|+||+|.+|..++..|+..|. +|++.+++.. .....++.... ..+..+ .+-.+ .+++++
T Consensus 6 ~k~vlVTGas~gIG~~~a~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 81 (322)
T PRK07453 6 KGTVIITGASSGVGLYAAKALAKRGW--HVIMACRNLKKAEAAAQELGIPP--DSYTIIHIDLGDLDSVRRFVDDFRALG 81 (322)
T ss_pred CCEEEEEcCCChHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHhhccC--CceEEEEecCCCHHHHHHHHHHHHHhC
Confidence 45799999999999999999999886 8999998752 22223332211 122221 11122 222232
Q ss_pred -CCcEEEEcCCCCCC----CCCCH---HHHHHHHHHHH----HHHHHHHhhhCC-CeEEEEec
Q 018512 110 -GMDLVIIPAGVPRK----PGMTR---DDLFNINAGIV----RTLCEGIAKCCP-NATVNLIS 159 (354)
Q Consensus 110 -~aDvVIi~ag~~~~----~g~~r---~d~~~~n~~~~----~~i~~~i~~~~p-~a~viv~t 159 (354)
..|+||+.||.... ...+. ...+..|+... +.+.+.+++... .+.|+++|
T Consensus 82 ~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vs 144 (322)
T PRK07453 82 KPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILG 144 (322)
T ss_pred CCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEc
Confidence 48999999985321 12222 23355666544 444555544432 24555554
No 277
>PRK08264 short chain dehydrogenase; Validated
Probab=96.90 E-value=0.012 Score=53.29 Aligned_cols=144 Identities=11% Similarity=0.066 Sum_probs=77.4
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCe-EEE-EeCCCcHHhhh---CCCcEEEE
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAV-VRG-FLGQPQLENAL---TGMDLVII 116 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~-v~~-~~~~~d~~~al---~~aDvVIi 116 (354)
.++|.|+||+|.+|+.++..|+..|. .+|++++++..... + ...... +.. .....++++.+ ...|+||+
T Consensus 6 ~~~vlItGgsg~iG~~la~~l~~~G~-~~V~~~~r~~~~~~--~---~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~ 79 (238)
T PRK08264 6 GKVVLVTGANRGIGRAFVEQLLARGA-AKVYAAARDPESVT--D---LGPRVVPLQLDVTDPASVAAAAEAASDVTILVN 79 (238)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCc-ccEEEEecChhhhh--h---cCCceEEEEecCCCHHHHHHHHHhcCCCCEEEE
Confidence 45899999999999999999998875 26888998652211 1 110111 111 11112223333 35899999
Q ss_pred cCCCCCCCC----CCH---HHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEE
Q 018512 117 PAGVPRKPG----MTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLG 186 (354)
Q Consensus 117 ~ag~~~~~g----~~r---~d~~~~n~~~~~~i~~~i~~~---~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG 186 (354)
++|.....+ .+. .+.+..|+.....+.+.+.+. ...+.++++|...... +.+....+|
T Consensus 80 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~------------~~~~~~~y~ 147 (238)
T PRK08264 80 NAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWV------------NFPNLGTYS 147 (238)
T ss_pred CCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcc------------CCCCchHhH
Confidence 998732211 122 233455666666666654432 2345566666433211 233333445
Q ss_pred eccchHHHHHHHHHHHh
Q 018512 187 VTMLDVVRANTFVAEVL 203 (354)
Q Consensus 187 ~t~ld~~r~~~~la~~l 203 (354)
.+......+...++..+
T Consensus 148 ~sK~a~~~~~~~l~~~~ 164 (238)
T PRK08264 148 ASKAAAWSLTQALRAEL 164 (238)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 44433444555566655
No 278
>PRK07060 short chain dehydrogenase; Provisional
Probab=96.90 E-value=0.01 Score=53.93 Aligned_cols=116 Identities=18% Similarity=0.191 Sum_probs=65.9
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEE-EeCCCcHHhhh---CCCcEEEE
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENAL---TGMDLVII 116 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~~~d~~~al---~~aDvVIi 116 (354)
+.+++.|+||+|.+|..++..|+..|. +|++++++.... .++........+.. +....++.+++ ...|+||+
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~--~V~~~~r~~~~~--~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~ 83 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGA--RVVAAARNAAAL--DRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVN 83 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCC--EEEEEeCCHHHH--HHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEE
Confidence 345899999999999999999999887 899999865211 11211100011111 11111223333 35899999
Q ss_pred cCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHhhh----CCCeEEEEecC
Q 018512 117 PAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKC----CPNATVNLISN 160 (354)
Q Consensus 117 ~ag~~~~~---g~~r---~d~~~~n~~~~~~i~~~i~~~----~p~a~viv~tN 160 (354)
.+|..... ..+. ...+..|+.....+.+.+.+. +..+.|+++|.
T Consensus 84 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS 137 (245)
T PRK07060 84 CAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSS 137 (245)
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEcc
Confidence 98864321 1222 233456766666666655543 22355666653
No 279
>PRK12367 short chain dehydrogenase; Provisional
Probab=96.90 E-value=0.018 Score=53.13 Aligned_cols=101 Identities=17% Similarity=0.214 Sum_probs=60.2
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEE-EeCCCcHHhhhCCCcEEEEcCCC
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENALTGMDLVIIPAGV 120 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~~~d~~~al~~aDvVIi~ag~ 120 (354)
.+++.|+||+|.+|.+++..|+..|. +|+++|++....... ..+.. ...+.. .....+..+.+...|++|+.||.
T Consensus 14 ~k~~lITGas~gIG~ala~~l~~~G~--~Vi~~~r~~~~~~~~-~~~~~-~~~~~~D~~~~~~~~~~~~~iDilVnnAG~ 89 (245)
T PRK12367 14 GKRIGITGASGALGKALTKAFRAKGA--KVIGLTHSKINNSES-NDESP-NEWIKWECGKEESLDKQLASLDVLILNHGI 89 (245)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC--EEEEEECCchhhhhh-hccCC-CeEEEeeCCCHHHHHHhcCCCCEEEECCcc
Confidence 35899999999999999999999987 899999875211111 11111 111111 11112344567789999999986
Q ss_pred CCCCCCCH---HHHHHHHHHHHHHHHHHH
Q 018512 121 PRKPGMTR---DDLFNINAGIVRTLCEGI 146 (354)
Q Consensus 121 ~~~~g~~r---~d~~~~n~~~~~~i~~~i 146 (354)
......+. .+.+..|+.....+++.+
T Consensus 90 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~ 118 (245)
T PRK12367 90 NPGGRQDPENINKALEINALSSWRLLELF 118 (245)
T ss_pred CCcCCCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 43222222 334556765544444443
No 280
>PRK12744 short chain dehydrogenase; Provisional
Probab=96.89 E-value=0.024 Score=52.17 Aligned_cols=155 Identities=15% Similarity=0.155 Sum_probs=81.4
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--c----hhHHHHHhcCCCCCeEEEEe-CCCc---HHhh----
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--T----PGVTADISHMDTGAVVRGFL-GQPQ---LENA---- 107 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~----~g~~~dl~~~~~~~~v~~~~-~~~d---~~~a---- 107 (354)
.+++.|+||+|.+|..++..|+..|. ++++++.+. . .....++.... ..+..+. +-++ .++.
T Consensus 8 ~k~vlItGa~~gIG~~~a~~l~~~G~--~vv~i~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~ 83 (257)
T PRK12744 8 GKVVLIAGGAKNLGGLIARDLAAQGA--KAVAIHYNSAASKADAEETVAAVKAAG--AKAVAFQADLTTAAAVEKLFDDA 83 (257)
T ss_pred CcEEEEECCCchHHHHHHHHHHHCCC--cEEEEecCCccchHHHHHHHHHHHHhC--CcEEEEecCcCCHHHHHHHHHHH
Confidence 45899999999999999999998887 666665432 1 11122232211 1122111 1112 2222
Q ss_pred ---hCCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHhhhC-CCeEEEEe-cCCCCCchHHHHHHHHHh
Q 018512 108 ---LTGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKCC-PNATVNLI-SNPVNSTVPIAAEVFKKA 176 (354)
Q Consensus 108 ---l~~aDvVIi~ag~~~~~---g~~r---~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~-tNPv~~~~~~~~~~~~~~ 176 (354)
+...|++|++||..... ..+. ...+.-|+.....+++.+.+.. +.+.++++ |.-....
T Consensus 84 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~----------- 152 (257)
T PRK12744 84 KAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAF----------- 152 (257)
T ss_pred HHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhccc-----------
Confidence 24689999999864211 1222 2344557665555555554432 33433333 3222111
Q ss_pred CCCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512 177 GTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV 215 (354)
Q Consensus 177 ~~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~ 215 (354)
.|..-.++.+......+.+.+++.++ +..|++..+
T Consensus 153 --~~~~~~Y~~sK~a~~~~~~~la~e~~--~~~i~v~~v 187 (257)
T PRK12744 153 --TPFYSAYAGSKAPVEHFTRAASKEFG--ARGISVTAV 187 (257)
T ss_pred --CCCcccchhhHHHHHHHHHHHHHHhC--cCceEEEEE
Confidence 12233466665555677788888875 344544333
No 281
>PRK12743 oxidoreductase; Provisional
Probab=96.89 E-value=0.054 Score=49.79 Aligned_cols=114 Identities=14% Similarity=0.147 Sum_probs=63.4
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC---chhHHHHHhcCCCCCeEEEE-eCCCc---HHhh-------h
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGF-LGQPQ---LENA-------L 108 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~---~~g~~~dl~~~~~~~~v~~~-~~~~d---~~~a-------l 108 (354)
.+|.|+||+|.+|+.++..|+..|. +|++.+... ......++.... ..+..+ .+-++ .+.+ +
T Consensus 3 k~vlItGas~giG~~~a~~l~~~G~--~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 78 (256)
T PRK12743 3 QVAIVTASDSGIGKACALLLAQQGF--DIGITWHSDEEGAKETAEEVRSHG--VRAEIRQLDLSDLPEGAQALDKLIQRL 78 (256)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCChHHHHHHHHHHHhcC--CceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 4799999999999999999999987 787776533 122223333222 112211 11122 1121 2
Q ss_pred CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhh----hCCCeEEEEecC
Q 018512 109 TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAK----CCPNATVNLISN 160 (354)
Q Consensus 109 ~~aDvVIi~ag~~~~~---g~~---r~d~~~~n~~~~~~i~~~i~~----~~p~a~viv~tN 160 (354)
...|+||+++|..... ..+ ....+..|+.....+.+.+.+ ....+.|+++|.
T Consensus 79 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS 140 (256)
T PRK12743 79 GRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITS 140 (256)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEee
Confidence 4579999998864321 112 123345565555555544433 333456666654
No 282
>PRK12747 short chain dehydrogenase; Provisional
Probab=96.88 E-value=0.03 Score=51.30 Aligned_cols=147 Identities=18% Similarity=0.172 Sum_probs=76.9
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC---chhHHHHHhcCCCCCeEEEE-eCCCcH----------Hhh
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGF-LGQPQL----------ENA 107 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~---~~g~~~dl~~~~~~~~v~~~-~~~~d~----------~~a 107 (354)
.+++.|+||+|.+|.+++..|+..|. .|++.+... ......++..... .+..+ .+-.+. .+.
T Consensus 4 ~k~~lItGas~gIG~~ia~~l~~~G~--~v~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (252)
T PRK12747 4 GKVALVTGASRGIGRAIAKRLANDGA--LVAIHYGNRKEEAEETVYEIQSNGG--SAFSIGANLESLHGVEALYSSLDNE 79 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC--eEEEEcCCCHHHHHHHHHHHHhcCC--ceEEEecccCCHHHHHHHHHHHHHH
Confidence 35899999999999999999999987 788875432 2222233332111 11110 000111 111
Q ss_pred h------CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHH
Q 018512 108 L------TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFK 174 (354)
Q Consensus 108 l------~~aDvVIi~ag~~~~~---g~~r---~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~ 174 (354)
+ ...|++|+.||..... ..+. ...+.-|+.....+.+.+.+.- ..+.||++|.-....
T Consensus 80 ~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~--------- 150 (252)
T PRK12747 80 LQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRI--------- 150 (252)
T ss_pred hhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCccccc---------
Confidence 1 2689999999864211 1121 2344566555555554444332 345666665432211
Q ss_pred HhCCCCCCCEEEeccchHHHHHHHHHHHhC
Q 018512 175 KAGTYDPKKLLGVTMLDVVRANTFVAEVLG 204 (354)
Q Consensus 175 ~~~~~p~~kviG~t~ld~~r~~~~la~~l~ 204 (354)
+.|..-.++.+......+.+.++..++
T Consensus 151 ---~~~~~~~Y~~sKaa~~~~~~~la~e~~ 177 (252)
T PRK12747 151 ---SLPDFIAYSMTKGAINTMTFTLAKQLG 177 (252)
T ss_pred ---CCCCchhHHHHHHHHHHHHHHHHHHHh
Confidence 222222344444444566677777664
No 283
>PRK09072 short chain dehydrogenase; Provisional
Probab=96.87 E-value=0.013 Score=54.14 Aligned_cols=114 Identities=22% Similarity=0.255 Sum_probs=65.9
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEe-CCCcHH---hh------hC
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQLE---NA------LT 109 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~-~~~d~~---~a------l~ 109 (354)
.++|.|+||+|.+|..++..|+.+|. +|++++++.. .....++.. . ..+..+. +-.|.+ +. +.
T Consensus 5 ~~~vlItG~s~~iG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~-~--~~~~~~~~D~~d~~~~~~~~~~~~~~~ 79 (263)
T PRK09072 5 DKRVLLTGASGGIGQALAEALAAAGA--RLLLVGRNAEKLEALAARLPY-P--GRHRWVVADLTSEAGREAVLARAREMG 79 (263)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHhc-C--CceEEEEccCCCHHHHHHHHHHHHhcC
Confidence 45899999999999999999999887 8999998752 222222311 1 1222211 112221 11 35
Q ss_pred CCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecC
Q 018512 110 GMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISN 160 (354)
Q Consensus 110 ~aDvVIi~ag~~~~~---g~~r---~d~~~~n~~~~~~i~~~i~~~---~p~a~viv~tN 160 (354)
..|+||+++|..... ..+. .+.+..|+.....+.+.+.++ .+.+.+++++.
T Consensus 80 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS 139 (263)
T PRK09072 80 GINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGS 139 (263)
T ss_pred CCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecC
Confidence 689999999864321 1121 234456766655555555432 22355665554
No 284
>PRK06196 oxidoreductase; Provisional
Probab=96.86 E-value=0.016 Score=55.26 Aligned_cols=113 Identities=19% Similarity=0.142 Sum_probs=64.8
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEE-EeCCCcHHhh-------hCCC
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRG-FLGQPQLENA-------LTGM 111 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~-~~~~~d~~~a-------l~~a 111 (354)
.++|.|+||+|.+|..++..|+..|. +|++.+++.. .....++.... .+.. +....+.+++ +.+.
T Consensus 26 ~k~vlITGasggIG~~~a~~L~~~G~--~Vv~~~R~~~~~~~~~~~l~~v~---~~~~Dl~d~~~v~~~~~~~~~~~~~i 100 (315)
T PRK06196 26 GKTAIVTGGYSGLGLETTRALAQAGA--HVIVPARRPDVAREALAGIDGVE---VVMLDLADLESVRAFAERFLDSGRRI 100 (315)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhhhCe---EEEccCCCHHHHHHHHHHHHhcCCCC
Confidence 35899999999999999999999987 8999998752 11222222111 0111 1111111111 2578
Q ss_pred cEEEEcCCCCCCCC----CCHHHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecC
Q 018512 112 DLVIIPAGVPRKPG----MTRDDLFNINAGI----VRTLCEGIAKCCPNATVNLISN 160 (354)
Q Consensus 112 DvVIi~ag~~~~~g----~~r~d~~~~n~~~----~~~i~~~i~~~~p~a~viv~tN 160 (354)
|+||+.||....+. ......+..|+.. ++.+.+.+++.. .+.|+++|.
T Consensus 101 D~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS 156 (315)
T PRK06196 101 DILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGA-GARVVALSS 156 (315)
T ss_pred CEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCeEEEECC
Confidence 99999998643211 1122334555444 556666665543 355666653
No 285
>PRK05867 short chain dehydrogenase; Provisional
Probab=96.86 E-value=0.019 Score=52.62 Aligned_cols=114 Identities=19% Similarity=0.193 Sum_probs=64.7
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCc---HHh-------hh
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LEN-------AL 108 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~-------al 108 (354)
.+++.|+||+|.+|..++..|+..|. +|++.+++. .+....++.... ..+..+. +-++ ..+ .+
T Consensus 9 ~k~vlVtGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (253)
T PRK05867 9 GKRALITGASTGIGKRVALAYVEAGA--QVAIAARHLDALEKLADEIGTSG--GKVVPVCCDVSQHQQVTSMLDQVTAEL 84 (253)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHhcC--CeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 35799999999999999999999887 899999875 222233333321 1222211 1112 222 23
Q ss_pred CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHH----HHHHhhhCCCeEEEEec
Q 018512 109 TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTL----CEGIAKCCPNATVNLIS 159 (354)
Q Consensus 109 ~~aDvVIi~ag~~~~~---g~~r---~d~~~~n~~~~~~i----~~~i~~~~p~a~viv~t 159 (354)
...|++|+++|..... ..+. ...+..|+.....+ .+.+.+....+.|++++
T Consensus 85 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~s 145 (253)
T PRK05867 85 GGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTA 145 (253)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEEC
Confidence 4789999999864321 1122 22344555444444 44444433345566554
No 286
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=96.86 E-value=0.028 Score=51.82 Aligned_cols=157 Identities=15% Similarity=0.117 Sum_probs=83.0
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc---hhHHHHHhcCCCCCeEEEE-eCCCcH---Hhh------
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTGAVVRGF-LGQPQL---ENA------ 107 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~---~g~~~dl~~~~~~~~v~~~-~~~~d~---~~a------ 107 (354)
+.+++.|+||+|.+|..++..|+..|. .+++...+.. .....++.... ..+..+ .+-+|. .+.
T Consensus 6 ~~k~~lItGa~~gIG~~ia~~l~~~G~--~vvi~~~~~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~i~~~~~~~~~ 81 (261)
T PRK08936 6 EGKVVVITGGSTGLGRAMAVRFGKEKA--KVVINYRSDEEEANDVAEEIKKAG--GEAIAVKGDVTVESDVVNLIQTAVK 81 (261)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHHcC--CeEEEEEecCCCHHHHHHHHHHHHH
Confidence 456899999999999999999999887 7777766431 22223333221 111111 111222 111
Q ss_pred -hCCCcEEEEcCCCCCCC---CCCHH---HHHHHHHH----HHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHh
Q 018512 108 -LTGMDLVIIPAGVPRKP---GMTRD---DLFNINAG----IVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKA 176 (354)
Q Consensus 108 -l~~aDvVIi~ag~~~~~---g~~r~---d~~~~n~~----~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~ 176 (354)
+...|++|+.+|..... ..+.. ..+..|+. ..+.+.+.+.+....+.++++|.-...
T Consensus 82 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~------------ 149 (261)
T PRK08936 82 EFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQ------------ 149 (261)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccc------------
Confidence 23579999999864321 11222 23455643 334556666665555666666541111
Q ss_pred CCCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512 177 GTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV 215 (354)
Q Consensus 177 ~~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~ 215 (354)
.+.|..-.++.+......+...++..+. +..|++.++
T Consensus 150 ~~~~~~~~Y~~sKaa~~~~~~~la~e~~--~~gi~v~~v 186 (261)
T PRK08936 150 IPWPLFVHYAASKGGVKLMTETLAMEYA--PKGIRVNNI 186 (261)
T ss_pred CCCCCCcccHHHHHHHHHHHHHHHHHHh--hcCeEEEEE
Confidence 1233333455543333345556666553 344544444
No 287
>PRK12742 oxidoreductase; Provisional
Probab=96.86 E-value=0.026 Score=50.95 Aligned_cols=147 Identities=15% Similarity=0.168 Sum_probs=76.4
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCc---HHhh---hCCCcEEE
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ---LENA---LTGMDLVI 115 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d---~~~a---l~~aDvVI 115 (354)
.++|.|+||+|.+|+.++..|+..|. ++++.+..... ...++.... ....... +.+| +.+. ....|++|
T Consensus 6 ~k~vlItGasggIG~~~a~~l~~~G~--~v~~~~~~~~~-~~~~l~~~~-~~~~~~~-D~~~~~~~~~~~~~~~~id~li 80 (237)
T PRK12742 6 GKKVLVLGGSRGIGAAIVRRFVTDGA--NVRFTYAGSKD-AAERLAQET-GATAVQT-DSADRDAVIDVVRKSGALDILV 80 (237)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC--EEEEecCCCHH-HHHHHHHHh-CCeEEec-CCCCHHHHHHHHHHhCCCcEEE
Confidence 45899999999999999999999887 78777654311 111121100 0111111 1112 1222 34589999
Q ss_pred EcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHhhh-CCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEec
Q 018512 116 IPAGVPRKPG---MT---RDDLFNINAGIVRTLCEGIAKC-CPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT 188 (354)
Q Consensus 116 i~ag~~~~~g---~~---r~d~~~~n~~~~~~i~~~i~~~-~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~t 188 (354)
+++|...... .+ ....+..|+.....++..+.+. .+.+.+++++.-.... ...+..-.++.+
T Consensus 81 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~~~~Y~~s 149 (237)
T PRK12742 81 VNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDR-----------MPVAGMAAYAAS 149 (237)
T ss_pred ECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecccccc-----------CCCCCCcchHHh
Confidence 9998643211 12 1234455655544444333332 2345555554322110 012334456665
Q ss_pred cchHHHHHHHHHHHhC
Q 018512 189 MLDVVRANTFVAEVLG 204 (354)
Q Consensus 189 ~ld~~r~~~~la~~l~ 204 (354)
......+.+.+++.++
T Consensus 150 Kaa~~~~~~~la~~~~ 165 (237)
T PRK12742 150 KSALQGMARGLARDFG 165 (237)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 5444556677777764
No 288
>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional
Probab=96.85 E-value=0.0067 Score=57.79 Aligned_cols=64 Identities=20% Similarity=0.316 Sum_probs=47.2
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 118 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a 118 (354)
+||+|||. |.+|..++..|+..++ +|+++|+++.. ..++..... . ...+..+++++||+||++.
T Consensus 2 ~~Ig~IGl-G~mG~~mA~~l~~~G~--~V~v~d~~~~~--~~~~~~~g~----~---~~~s~~~~~~~aDvVi~~v 65 (296)
T PRK15461 2 AAIAFIGL-GQMGSPMASNLLKQGH--QLQVFDVNPQA--VDALVDKGA----T---PAASPAQAAAGAEFVITML 65 (296)
T ss_pred CeEEEEee-CHHHHHHHHHHHHCCC--eEEEEcCCHHH--HHHHHHcCC----c---ccCCHHHHHhcCCEEEEec
Confidence 48999999 9999999999998887 89999997622 122322211 1 1235567889999999984
No 289
>PRK08507 prephenate dehydrogenase; Validated
Probab=96.85 E-value=0.0071 Score=56.87 Aligned_cols=66 Identities=23% Similarity=0.343 Sum_probs=44.3
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 118 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a 118 (354)
|||+|||. |.+|..++..|...++..+|+.+|+++.. ...+..... ... ..+..+ +.+||+||++.
T Consensus 1 m~I~iIG~-G~mG~sla~~l~~~g~~~~v~~~d~~~~~--~~~~~~~g~---~~~---~~~~~~-~~~aD~Vilav 66 (275)
T PRK08507 1 MKIGIIGL-GLMGGSLGLALKEKGLISKVYGYDHNELH--LKKALELGL---VDE---IVSFEE-LKKCDVIFLAI 66 (275)
T ss_pred CEEEEEcc-CHHHHHHHHHHHhcCCCCEEEEEcCCHHH--HHHHHHCCC---Ccc---cCCHHH-HhcCCEEEEeC
Confidence 58999998 99999999999988865578999987521 111222211 111 123445 44699999984
No 290
>PRK06139 short chain dehydrogenase; Provisional
Probab=96.85 E-value=0.022 Score=55.16 Aligned_cols=116 Identities=17% Similarity=0.107 Sum_probs=65.4
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCe-EEE-EeCCCcHHhhh-------C
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAV-VRG-FLGQPQLENAL-------T 109 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~-v~~-~~~~~d~~~al-------~ 109 (354)
+.++|+|+||+|.+|..++..|+..|. +|++.++++ ++....++........ +.. +....+.++++ .
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~--~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 83 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGA--RLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGG 83 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence 345899999999999999999999997 899999876 2223333433221111 111 11111222222 4
Q ss_pred CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHH----HHHHHHHhhhCCCeEEEEec
Q 018512 110 GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIV----RTLCEGIAKCCPNATVNLIS 159 (354)
Q Consensus 110 ~aDvVIi~ag~~~~~---g~~---r~d~~~~n~~~~----~~i~~~i~~~~p~a~viv~t 159 (354)
..|++|++||..... ..+ ....+..|+... +...+.+++.. .+.+|+++
T Consensus 84 ~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~-~g~iV~is 142 (330)
T PRK06139 84 RIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQG-HGIFINMI 142 (330)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcC-CCEEEEEc
Confidence 689999999864321 111 122345554433 44445555433 45566554
No 291
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.84 E-value=0.035 Score=50.55 Aligned_cols=115 Identities=15% Similarity=0.198 Sum_probs=62.1
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEE-ecCCc--hhHHHHHhcCCCCCeEEEE-eCCCc---HHhhh------
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLY-DVVNT--PGVTADISHMDTGAVVRGF-LGQPQ---LENAL------ 108 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~-D~~~~--~g~~~dl~~~~~~~~v~~~-~~~~d---~~~al------ 108 (354)
.++++|+||+|.+|..++..|+..|. ++++. +++.. .....++.... ..+..+ .+-+| +..++
T Consensus 4 ~~~vlItGa~g~iG~~~a~~l~~~g~--~v~~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (250)
T PRK08063 4 GKVALVTGSSRGIGKAIALRLAEEGY--DIAVNYARSRKAAEETAEEIEALG--RKALAVKANVGDVEKIKEMFAQIDEE 79 (250)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 35899999999999999999999887 66654 44432 22223333222 112211 11112 22223
Q ss_pred -CCCcEEEEcCCCCCC-C--CCCHHH---HHHHHHHHHHHHHHHHhhhC---CCeEEEEecC
Q 018512 109 -TGMDLVIIPAGVPRK-P--GMTRDD---LFNINAGIVRTLCEGIAKCC---PNATVNLISN 160 (354)
Q Consensus 109 -~~aDvVIi~ag~~~~-~--g~~r~d---~~~~n~~~~~~i~~~i~~~~---p~a~viv~tN 160 (354)
...|+||+.+|.... + ..+..+ .+..|......+++.+.++. +.+.|+++|.
T Consensus 80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS 141 (250)
T PRK08063 80 FGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSS 141 (250)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcc
Confidence 368999999875321 1 112221 23456555555555554432 3345666554
No 292
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=96.84 E-value=0.006 Score=57.21 Aligned_cols=95 Identities=13% Similarity=0.101 Sum_probs=58.0
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEE-EeCCCcHHhhh------CC-CcEEE
Q 018512 44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENAL------TG-MDLVI 115 (354)
Q Consensus 44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~~~d~~~al------~~-aDvVI 115 (354)
||+|+||+|++|+.++..|+..++ +|..+.+++.... .... ..+.. +.....+.+++ ++ +|.|+
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~--~V~~~~R~~~~~~-----~~~~-~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~ 72 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASV--PFLVASRSSSSSA-----GPNE-KHVKFDWLDEDTWDNPFSSDDGMEPEISAVY 72 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCC--cEEEEeCCCcccc-----CCCC-ccccccCCCHHHHHHHHhcccCcCCceeEEE
Confidence 589999999999999999998887 8999988762110 0000 00111 11223455666 67 99999
Q ss_pred EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEE
Q 018512 116 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNL 157 (354)
Q Consensus 116 i~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv 157 (354)
++++... . . ....+++++.+++.+-+-+|.+
T Consensus 73 ~~~~~~~--~--~-------~~~~~~~i~aa~~~gv~~~V~~ 103 (285)
T TIGR03649 73 LVAPPIP--D--L-------APPMIKFIDFARSKGVRRFVLL 103 (285)
T ss_pred EeCCCCC--C--h-------hHHHHHHHHHHHHcCCCEEEEe
Confidence 8764321 1 1 1234566777776665544433
No 293
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.84 E-value=0.04 Score=50.20 Aligned_cols=147 Identities=14% Similarity=0.115 Sum_probs=74.7
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC---chhHHHHHhcCCCCCeEEEE-eCCCc---HHh-------h
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGF-LGQPQ---LEN-------A 107 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~---~~g~~~dl~~~~~~~~v~~~-~~~~d---~~~-------a 107 (354)
..+|.|+||+|++|++++..|+..+. ++++..... ......++.... ..+..+ .+-++ ... .
T Consensus 6 ~~~vlitGasg~iG~~l~~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (252)
T PRK06077 6 DKVVVVTGSGRGIGRAIAVRLAKEGS--LVVVNAKKRAEEMNETLKMVKENG--GEGIGVLADVSTREGCETLAKATIDR 81 (252)
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCChHHHHHHHHHHHHcC--CeeEEEEeccCCHHHHHHHHHHHHHH
Confidence 45899999999999999999998887 666654332 111122222211 111111 01111 112 2
Q ss_pred hCCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHhCCCC
Q 018512 108 LTGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYD 180 (354)
Q Consensus 108 l~~aDvVIi~ag~~~~~---g~~r---~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~~~~p 180 (354)
+...|+||+++|..... +.+. .+.+..|+.....+++.+.++- +.+.++++|.-.. ..+.+
T Consensus 82 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~------------~~~~~ 149 (252)
T PRK06077 82 YGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAG------------IRPAY 149 (252)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhc------------cCCCC
Confidence 34679999999864221 1122 2334555555445555444432 2355666553111 11233
Q ss_pred CCCEEEeccchHHHHHHHHHHHhC
Q 018512 181 PKKLLGVTMLDVVRANTFVAEVLG 204 (354)
Q Consensus 181 ~~kviG~t~ld~~r~~~~la~~l~ 204 (354)
+.-.++.+......+...+++.++
T Consensus 150 ~~~~Y~~sK~~~~~~~~~l~~~~~ 173 (252)
T PRK06077 150 GLSIYGAMKAAVINLTKYLALELA 173 (252)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHh
Confidence 333344443334456666677664
No 294
>PRK08219 short chain dehydrogenase; Provisional
Probab=96.84 E-value=0.013 Score=52.51 Aligned_cols=75 Identities=21% Similarity=0.233 Sum_probs=46.5
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCe-EEE-EeCCCcHHhhhC---CCcEEEE
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAV-VRG-FLGQPQLENALT---GMDLVII 116 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~-v~~-~~~~~d~~~al~---~aDvVIi 116 (354)
++++.|+||+|++|+.++..|+.+ . +|+++|++... ..++.+...... +.. .....+++++++ +.|+||+
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~--~V~~~~r~~~~--~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~ 77 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-H--TLLLGGRPAER--LDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVH 77 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-C--CEEEEeCCHHH--HHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEE
Confidence 358999999999999999999887 5 89999986421 111211100011 111 111123344454 6999999
Q ss_pred cCCCC
Q 018512 117 PAGVP 121 (354)
Q Consensus 117 ~ag~~ 121 (354)
++|..
T Consensus 78 ~ag~~ 82 (227)
T PRK08219 78 NAGVA 82 (227)
T ss_pred CCCcC
Confidence 98864
No 295
>PRK07454 short chain dehydrogenase; Provisional
Probab=96.83 E-value=0.013 Score=53.28 Aligned_cols=114 Identities=16% Similarity=0.173 Sum_probs=63.8
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEe-CCCcH---Hhhh-------
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQL---ENAL------- 108 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~-~~~d~---~~al------- 108 (354)
++++.|+||+|.+|..++..|+.+|. .|+++++++. .....++.... ..+..+. +-++. ..++
T Consensus 6 ~k~vlItG~sg~iG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (241)
T PRK07454 6 MPRALITGASSGIGKATALAFAKAGW--DLALVARSQDALEALAAELRSTG--VKAAAYSIDLSNPEAIAPGIAELLEQF 81 (241)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhCC--CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 35799999999999999999999888 8999998752 22222232211 1121111 11222 2222
Q ss_pred CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecC
Q 018512 109 TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISN 160 (354)
Q Consensus 109 ~~aDvVIi~ag~~~~~---g~~---r~d~~~~n~~~----~~~i~~~i~~~~p~a~viv~tN 160 (354)
.+.|+||.++|..... ..+ ....+..|+.. .+.+.+.+.+.. .+.++++|.
T Consensus 82 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS 142 (241)
T PRK07454 82 GCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARG-GGLIINVSS 142 (241)
T ss_pred CCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CcEEEEEcc
Confidence 3589999999864321 112 12234455554 344444444432 345555553
No 296
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=96.83 E-value=0.0021 Score=58.83 Aligned_cols=70 Identities=26% Similarity=0.377 Sum_probs=46.6
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHH-HhcCCCCCeEEEEeCCCc---HHhh-hCCCcEEEEc
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTAD-ISHMDTGAVVRGFLGQPQ---LENA-LTGMDLVIIP 117 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~d-l~~~~~~~~v~~~~~~~d---~~~a-l~~aDvVIi~ 117 (354)
|+++|+|+ |.+|+++|..|...|+ +++++|.++.. +.. +.+.....-+.+ ..++ +++| +.++|.+|.+
T Consensus 1 m~iiIiG~-G~vG~~va~~L~~~g~--~Vv~Id~d~~~--~~~~~~~~~~~~~v~g--d~t~~~~L~~agi~~aD~vva~ 73 (225)
T COG0569 1 MKIIIIGA-GRVGRSVARELSEEGH--NVVLIDRDEER--VEEFLADELDTHVVIG--DATDEDVLEEAGIDDADAVVAA 73 (225)
T ss_pred CEEEEECC-cHHHHHHHHHHHhCCC--ceEEEEcCHHH--HHHHhhhhcceEEEEe--cCCCHHHHHhcCCCcCCEEEEe
Confidence 68999999 9999999999999999 99999998721 111 111111111222 1122 3444 6899999997
Q ss_pred CC
Q 018512 118 AG 119 (354)
Q Consensus 118 ag 119 (354)
-+
T Consensus 74 t~ 75 (225)
T COG0569 74 TG 75 (225)
T ss_pred eC
Confidence 43
No 297
>PRK07679 pyrroline-5-carboxylate reductase; Reviewed
Probab=96.83 E-value=0.012 Score=55.57 Aligned_cols=69 Identities=14% Similarity=0.170 Sum_probs=47.0
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCC--CCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINP--LVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 118 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~--~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a 118 (354)
.|||+|||+ |.+|.+++..|+..+ ...+|.++|++.. ....++.... .++.. .+..++.++||+||++.
T Consensus 3 ~mkI~~IG~-G~mG~aia~~l~~~g~~~~~~v~v~~r~~~-~~~~~l~~~~---g~~~~---~~~~e~~~~aDvVilav 73 (279)
T PRK07679 3 IQNISFLGA-GSIAEAIIGGLLHANVVKGEQITVSNRSNE-TRLQELHQKY---GVKGT---HNKKELLTDANILFLAM 73 (279)
T ss_pred CCEEEEECc-cHHHHHHHHHHHHCCCCCcceEEEECCCCH-HHHHHHHHhc---CceEe---CCHHHHHhcCCEEEEEe
Confidence 479999998 999999999998876 2247899997541 1122332211 12221 34567789999999984
No 298
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=96.83 E-value=0.0074 Score=59.51 Aligned_cols=53 Identities=19% Similarity=0.354 Sum_probs=43.5
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 118 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a 118 (354)
.+||+||||.|.+|..++..|...|+ +|.++|++.. .+.++++++||+||++.
T Consensus 98 ~~~I~IiGG~GlmG~slA~~l~~~G~--~V~~~d~~~~----------------------~~~~~~~~~aDlVilav 150 (374)
T PRK11199 98 LRPVVIVGGKGQLGRLFAKMLTLSGY--QVRILEQDDW----------------------DRAEDILADAGMVIVSV 150 (374)
T ss_pred cceEEEEcCCChhhHHHHHHHHHCCC--eEEEeCCCcc----------------------hhHHHHHhcCCEEEEeC
Confidence 47999999559999999999999997 8999997420 12356789999999984
No 299
>PRK06928 pyrroline-5-carboxylate reductase; Reviewed
Probab=96.81 E-value=0.011 Score=55.77 Aligned_cols=100 Identities=18% Similarity=0.137 Sum_probs=61.4
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCC--CcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPL--VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 119 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~--~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag 119 (354)
++||+|||+ |.+|.+++..|...+. ..+|+++|++... ....+... ...+.. +.+..++++++|+||++..
T Consensus 1 m~~I~iIG~-G~mG~ala~~L~~~g~~~~~~V~~~~r~~~~-~~~~l~~~--~~~~~~---~~~~~e~~~~aDvVilavp 73 (277)
T PRK06928 1 MEKIGFIGY-GSMADMIATKLLETEVATPEEIILYSSSKNE-HFNQLYDK--YPTVEL---ADNEAEIFTKCDHSFICVP 73 (277)
T ss_pred CCEEEEECc-cHHHHHHHHHHHHCCCCCcccEEEEeCCcHH-HHHHHHHH--cCCeEE---eCCHHHHHhhCCEEEEecC
Confidence 368999998 9999999999988772 2489999986521 11222211 111222 2345677899999999842
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCC
Q 018512 120 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNS 164 (354)
Q Consensus 120 ~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~ 164 (354)
| ..+.++++.+..+- ++..|+.+.+-++.
T Consensus 74 -p---------------~~~~~vl~~l~~~l~~~~~ivS~~aGi~~ 103 (277)
T PRK06928 74 -P---------------LAVLPLLKDCAPVLTPDRHVVSIAAGVSL 103 (277)
T ss_pred -H---------------HHHHHHHHHHHhhcCCCCEEEEECCCCCH
Confidence 1 23445555555443 45556655565443
No 300
>PLN02256 arogenate dehydrogenase
Probab=96.81 E-value=0.011 Score=56.75 Aligned_cols=68 Identities=18% Similarity=0.192 Sum_probs=47.4
Q ss_pred CCCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhh-CCCcEEEE
Q 018512 38 GGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENAL-TGMDLVII 116 (354)
Q Consensus 38 ~~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al-~~aDvVIi 116 (354)
++.+.+||+|||. |.+|..++..|...|. +|+.+|.+.....+.+ .. +.. ..+.++.+ .++|+||+
T Consensus 32 ~~~~~~kI~IIG~-G~mG~slA~~L~~~G~--~V~~~d~~~~~~~a~~---~g----v~~---~~~~~e~~~~~aDvVil 98 (304)
T PLN02256 32 EKSRKLKIGIVGF-GNFGQFLAKTFVKQGH--TVLATSRSDYSDIAAE---LG----VSF---FRDPDDFCEEHPDVVLL 98 (304)
T ss_pred ccCCCCEEEEEee-CHHHHHHHHHHHhCCC--EEEEEECccHHHHHHH---cC----Cee---eCCHHHHhhCCCCEEEE
Confidence 4567789999998 9999999999988775 8999998752211121 11 111 13455555 47999999
Q ss_pred cC
Q 018512 117 PA 118 (354)
Q Consensus 117 ~a 118 (354)
+.
T Consensus 99 av 100 (304)
T PLN02256 99 CT 100 (304)
T ss_pred ec
Confidence 84
No 301
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=96.80 E-value=0.005 Score=51.66 Aligned_cols=75 Identities=20% Similarity=0.309 Sum_probs=52.0
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEc
Q 018512 40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP 117 (354)
Q Consensus 40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ 117 (354)
.+..+++|+|| |.+|..++..|...|. .+|.+++++.. +..+..+ ....+.... ..++.+.+.++|+||.+
T Consensus 10 l~~~~vlviGa-Gg~ar~v~~~L~~~g~-~~i~i~nRt~~ra~~l~~~~----~~~~~~~~~-~~~~~~~~~~~DivI~a 82 (135)
T PF01488_consen 10 LKGKRVLVIGA-GGAARAVAAALAALGA-KEITIVNRTPERAEALAEEF----GGVNIEAIP-LEDLEEALQEADIVINA 82 (135)
T ss_dssp GTTSEEEEESS-SHHHHHHHHHHHHTTS-SEEEEEESSHHHHHHHHHHH----TGCSEEEEE-GGGHCHHHHTESEEEE-
T ss_pred cCCCEEEEECC-HHHHHHHHHHHHHcCC-CEEEEEECCHHHHHHHHHHc----Cccccceee-HHHHHHHHhhCCeEEEe
Confidence 34569999999 9999999999998876 37999999752 2233333 112233322 24667789999999998
Q ss_pred CCCC
Q 018512 118 AGVP 121 (354)
Q Consensus 118 ag~~ 121 (354)
.+.+
T Consensus 83 T~~~ 86 (135)
T PF01488_consen 83 TPSG 86 (135)
T ss_dssp SSTT
T ss_pred cCCC
Confidence 6554
No 302
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=96.80 E-value=0.046 Score=49.74 Aligned_cols=32 Identities=28% Similarity=0.303 Sum_probs=27.6
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEec
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDV 76 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~ 76 (354)
++|.|+||+|.+|+.++..|+..+. ++++.+.
T Consensus 3 k~ilItGas~giG~~la~~l~~~g~--~v~~~~~ 34 (248)
T PRK06947 3 KVVLITGASRGIGRATAVLAAARGW--SVGINYA 34 (248)
T ss_pred cEEEEeCCCCcHHHHHHHHHHHCCC--EEEEEeC
Confidence 4799999999999999999999887 7777654
No 303
>PRK06057 short chain dehydrogenase; Provisional
Probab=96.78 E-value=0.0087 Score=55.02 Aligned_cols=35 Identities=23% Similarity=0.259 Sum_probs=31.8
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 78 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~ 78 (354)
.++|.|+||+|.+|.+++..|+..|. +|+++|++.
T Consensus 7 ~~~vlItGasggIG~~~a~~l~~~G~--~v~~~~r~~ 41 (255)
T PRK06057 7 GRVAVITGGGSGIGLATARRLAAEGA--TVVVGDIDP 41 (255)
T ss_pred CCEEEEECCCchHHHHHHHHHHHcCC--EEEEEeCCH
Confidence 45899999999999999999999887 899999875
No 304
>PRK05884 short chain dehydrogenase; Provisional
Probab=96.77 E-value=0.0074 Score=54.69 Aligned_cols=34 Identities=15% Similarity=0.220 Sum_probs=31.1
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 78 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~ 78 (354)
||+.|+||+|.+|+.++..|+..|. +|++++++.
T Consensus 1 m~vlItGas~giG~~ia~~l~~~g~--~v~~~~r~~ 34 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRNDGH--KVTLVGARR 34 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHCCC--EEEEEeCCH
Confidence 5899999999999999999999887 899999875
No 305
>PRK09186 flagellin modification protein A; Provisional
Probab=96.76 E-value=0.028 Score=51.38 Aligned_cols=35 Identities=26% Similarity=0.275 Sum_probs=31.5
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 78 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~ 78 (354)
.++|.|+||+|.+|..++..|+..|. +|++.+++.
T Consensus 4 ~k~vlItGas~giG~~~a~~l~~~g~--~v~~~~r~~ 38 (256)
T PRK09186 4 GKTILITGAGGLIGSALVKAILEAGG--IVIAADIDK 38 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEecCh
Confidence 45899999999999999999999887 899998865
No 306
>PF03949 Malic_M: Malic enzyme, NAD binding domain; InterPro: IPR012302 Malic enzymes (malate oxidoreductases) catalyse the oxidative decarboxylation of malate to form pyruvate [], a reaction important in a number of metabolic pathways - e.g. carbon dioxide released from the reaction may be used in sugar production during the Calvin cycle of photosynthesis []. There are 3 forms of the enzyme []: an NAD-dependent form that decarboxylates oxaloacetate; an NAD-dependent form that does not decarboxylate oxalo-acetate; and an NADPH-dependent form []. Other proteins known to be similar to malic enzymes are the Escherichia coli scfA protein; an enzyme from Zea mays (Maize), formerly thought to be cinnamyl-alcohol dehydrogenase []; and the hypothetical Saccharomyces cerevisiae protein YKL029c. Studies on the duck liver malic enzyme reveals that it can be alkylated by bromopyruvate, resulting in the loss of oxidative decarboxylation and the subsequent enhancement of pyruvate reductase activity []. The alkylated form is able to bind NADPH but not L-malate, indicating impaired substrate-or divalent metal ion-binding in the active site []. Sequence analysis has highlighted a cysteine residue as the point of alkylation, suggesting that it may play an important role in the activity of the enzyme [], although it is absent in the sequences from some species. There are three well conserved regions in the enzyme sequences. Two of them seem to be involved in the binding NAD or NADP. The significance of the third one, located in the central part of the enzymes, is not yet known.; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 2DVM_B 1WW8_A 3NV9_A 1PJ2_A 1PJL_B 1GZ3_A 1PJ4_A 1PJ3_C 1EFL_A 1EFK_B ....
Probab=96.75 E-value=0.0067 Score=56.34 Aligned_cols=107 Identities=20% Similarity=0.256 Sum_probs=72.2
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhC----CCC-----cEEEEEecCC--ch------hHHHHHhcCCCCCeEEEEeCCCc
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKIN----PLV-----SVLHLYDVVN--TP------GVTADISHMDTGAVVRGFLGQPQ 103 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~----~~~-----~ei~L~D~~~--~~------g~~~dl~~~~~~~~v~~~~~~~d 103 (354)
+..||++.|| |..|..++.+|... |+- +.++|+|.+. .. .....+.+... + ... ..+
T Consensus 24 ~d~riv~~GA-GsAg~gia~ll~~~~~~~G~~~~eA~~~i~lvD~~Gll~~~r~~l~~~~~~~a~~~~-~-~~~---~~~ 97 (255)
T PF03949_consen 24 SDQRIVFFGA-GSAGIGIARLLVAAMVREGLSEEEARKRIWLVDSKGLLTDDREDLNPHKKPFARKTN-P-EKD---WGS 97 (255)
T ss_dssp GG-EEEEEB--SHHHHHHHHHHHHHHHCTTS-HHHHHTTEEEEETTEEEBTTTSSHSHHHHHHHBSSS-T-TT-----SS
T ss_pred HHcEEEEeCC-ChhHHHHHHHHHHHHHHhcCCHHHHhccEEEEeccceEeccCccCChhhhhhhccCc-c-ccc---ccC
Confidence 3458999999 99999999887654 763 6899999975 11 11222333221 1 110 147
Q ss_pred HHhhhCCC--cEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCC--CchH
Q 018512 104 LENALTGM--DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN--STVP 167 (354)
Q Consensus 104 ~~~al~~a--DvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~--~~~~ 167 (354)
+.++++++ |++|=+.+.+.. +.+++++.|.+++++.+|+=.|||.. -.++
T Consensus 98 L~eav~~~kPtvLIG~S~~~g~--------------ft~evv~~Ma~~~erPIIF~LSNPt~~aE~~p 151 (255)
T PF03949_consen 98 LLEAVKGAKPTVLIGLSGQGGA--------------FTEEVVRAMAKHNERPIIFPLSNPTPKAECTP 151 (255)
T ss_dssp HHHHHHCH--SEEEECSSSTTS--------------S-HHHHHHCHHHSSSEEEEE-SSSCGGSSS-H
T ss_pred HHHHHHhcCCCEEEEecCCCCc--------------CCHHHHHHHhccCCCCEEEECCCCCCcccCCH
Confidence 89999999 999987664421 45688899999999999999999987 6654
No 307
>PRK07074 short chain dehydrogenase; Provisional
Probab=96.75 E-value=0.019 Score=52.63 Aligned_cols=34 Identities=32% Similarity=0.319 Sum_probs=30.6
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 78 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~ 78 (354)
.++.|+||+|.+|..++..|+..|. +|+++|++.
T Consensus 3 k~ilItGat~~iG~~la~~L~~~g~--~v~~~~r~~ 36 (257)
T PRK07074 3 RTALVTGAAGGIGQALARRFLAAGD--RVLALDIDA 36 (257)
T ss_pred CEEEEECCcchHHHHHHHHHHHCCC--EEEEEeCCH
Confidence 3799999999999999999998887 899999875
No 308
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=96.75 E-value=0.01 Score=50.24 Aligned_cols=118 Identities=19% Similarity=0.182 Sum_probs=70.4
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhc-----CCCCCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512 45 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISH-----MDTGAVVRGFLGQPQLENALTGMDLVIIPAG 119 (354)
Q Consensus 45 I~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~-----~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag 119 (354)
|+|+|+ |.+|..+|..|.+.++ +|.++++.. ......-.. ......+.......+..+....+|+||++.-
T Consensus 1 I~I~G~-GaiG~~~a~~L~~~g~--~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~viv~vK 76 (151)
T PF02558_consen 1 ILIIGA-GAIGSLYAARLAQAGH--DVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAPSADAGPYDLVIVAVK 76 (151)
T ss_dssp EEEEST-SHHHHHHHHHHHHTTC--EEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSHGHHHSTESEEEE-SS
T ss_pred CEEECc-CHHHHHHHHHHHHCCC--ceEEEEccc-cHHhhhheeEEEEecccceecccccccCcchhccCCCcEEEEEec
Confidence 789999 9999999999999888 899999865 111111111 1100112211111121246799999999842
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe-cc
Q 018512 120 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TM 189 (354)
Q Consensus 120 ~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~-t~ 189 (354)
.. -..+.++.++.+. ++..|+.+-|=++..- .+.+. +|+.++++- +.
T Consensus 77 a~----------------~~~~~l~~l~~~~~~~t~iv~~qNG~g~~~-----~l~~~--~~~~~v~~g~~~ 125 (151)
T PF02558_consen 77 AY----------------QLEQALQSLKPYLDPNTTIVSLQNGMGNEE-----VLAEY--FPRPRVLGGVTT 125 (151)
T ss_dssp GG----------------GHHHHHHHHCTGEETTEEEEEESSSSSHHH-----HHHCH--STGSGEEEEEEE
T ss_pred cc----------------chHHHHHHHhhccCCCcEEEEEeCCCCcHH-----HHHHH--cCCCcEEEEEEe
Confidence 11 1234566677665 6778888888776553 23333 456677654 54
No 309
>PRK07023 short chain dehydrogenase; Provisional
Probab=96.75 E-value=0.0043 Score=56.59 Aligned_cols=35 Identities=14% Similarity=0.191 Sum_probs=31.5
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 78 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~ 78 (354)
+|+|.|+||+|.+|..++..|+..|. +|++++++.
T Consensus 1 ~~~vlItGasggiG~~ia~~l~~~G~--~v~~~~r~~ 35 (243)
T PRK07023 1 AVRAIVTGHSRGLGAALAEQLLQPGI--AVLGVARSR 35 (243)
T ss_pred CceEEEecCCcchHHHHHHHHHhCCC--EEEEEecCc
Confidence 47899999999999999999998887 899999865
No 310
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=96.75 E-value=0.073 Score=48.07 Aligned_cols=72 Identities=22% Similarity=0.337 Sum_probs=45.8
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEE-eCCCc------HHhhhCCCcEEE
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGF-LGQPQ------LENALTGMDLVI 115 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~-~~~~d------~~~al~~aDvVI 115 (354)
|+|+|+||+|.+|+.++..|+..+....+++.+++.... ..+ ..+..+ .+-++ +.+.+...|+||
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~----~~~----~~~~~~~~Dls~~~~~~~~~~~~~~id~li 72 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD----FQH----DNVQWHALDVTDEAEIKQLSEQFTQLDWLI 72 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc----ccc----CceEEEEecCCCHHHHHHHHHhcCCCCEEE
Confidence 689999999999999999999876433677777654211 111 111111 11111 223457899999
Q ss_pred EcCCCCC
Q 018512 116 IPAGVPR 122 (354)
Q Consensus 116 i~ag~~~ 122 (354)
+++|...
T Consensus 73 ~~aG~~~ 79 (235)
T PRK09009 73 NCVGMLH 79 (235)
T ss_pred ECCcccc
Confidence 9998753
No 311
>PLN02780 ketoreductase/ oxidoreductase
Probab=96.75 E-value=0.021 Score=54.95 Aligned_cols=116 Identities=16% Similarity=0.203 Sum_probs=65.2
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEE--eCCCc-------HHhhhC-
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF--LGQPQ-------LENALT- 109 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~--~~~~d-------~~~al~- 109 (354)
...+.|+||+|.+|.+++..|+..|. +|+++++++ .+....++........+..+ .-+.+ +.+.+.
T Consensus 53 g~~~lITGAs~GIG~alA~~La~~G~--~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~ 130 (320)
T PLN02780 53 GSWALVTGPTDGIGKGFAFQLARKGL--NLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEG 130 (320)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC--CEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcC
Confidence 45899999999999999999999987 899999986 23333444332111122111 11111 122333
Q ss_pred -CCcEEEEcCCCCCCC-----CCCH---HHHHHHHHHHHHHHH----HHHhhhCCCeEEEEecC
Q 018512 110 -GMDLVIIPAGVPRKP-----GMTR---DDLFNINAGIVRTLC----EGIAKCCPNATVNLISN 160 (354)
Q Consensus 110 -~aDvVIi~ag~~~~~-----g~~r---~d~~~~n~~~~~~i~----~~i~~~~p~a~viv~tN 160 (354)
+.|++|+.||..... ..+. ...+..|+.....+. +.+.+.. .+.|+++|.
T Consensus 131 ~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~g~IV~iSS 193 (320)
T PLN02780 131 LDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIINIGS 193 (320)
T ss_pred CCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC-CcEEEEEec
Confidence 455999999864211 1222 234455655444444 4444333 455666553
No 312
>PRK08251 short chain dehydrogenase; Provisional
Probab=96.75 E-value=0.038 Score=50.32 Aligned_cols=114 Identities=22% Similarity=0.204 Sum_probs=63.9
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCcH----------HhhhC
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL----------ENALT 109 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d~----------~~al~ 109 (354)
+++.|+||+|.+|..++..|+..|. +|++.+++. ......++........+..+. +-++. .+.+.
T Consensus 3 k~vlItGas~giG~~la~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (248)
T PRK08251 3 QKILITGASSGLGAGMAREFAAKGR--DLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELG 80 (248)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4799999999999999999998886 899999876 222223333211111222211 11222 12245
Q ss_pred CCcEEEEcCCCCCCCC---CCH---HHHHHHHHHHHHHHHHHH----hhhCCCeEEEEec
Q 018512 110 GMDLVIIPAGVPRKPG---MTR---DDLFNINAGIVRTLCEGI----AKCCPNATVNLIS 159 (354)
Q Consensus 110 ~aDvVIi~ag~~~~~g---~~r---~d~~~~n~~~~~~i~~~i----~~~~p~a~viv~t 159 (354)
..|+||+.+|...... .+. ...+..|+.....+.+.+ ++... ..++++|
T Consensus 81 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-~~iv~~s 139 (248)
T PRK08251 81 GLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGS-GHLVLIS 139 (248)
T ss_pred CCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC-CeEEEEe
Confidence 7899999998643221 111 223455655544444444 33333 3445554
No 313
>PTZ00142 6-phosphogluconate dehydrogenase; Provisional
Probab=96.74 E-value=0.0062 Score=61.76 Aligned_cols=97 Identities=15% Similarity=0.167 Sum_probs=60.7
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCC--CCeEEEEeCCCcHHhhhC---CCcEEEEc
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT--GAVVRGFLGQPQLENALT---GMDLVIIP 117 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~--~~~v~~~~~~~d~~~al~---~aDvVIi~ 117 (354)
.+|+|||. |.+|+++|..|+..|+ +|.++|+++.. +.++..... ...+.. ..+++++++ ++|+||++
T Consensus 2 ~~IgvIGL-G~MG~~lA~nL~~~G~--~V~v~dr~~~~--~~~l~~~~~~~g~~i~~---~~s~~e~v~~l~~~d~Iil~ 73 (470)
T PTZ00142 2 SDIGLIGL-AVMGQNLALNIASRGF--KISVYNRTYEK--TEEFVKKAKEGNTRVKG---YHTLEELVNSLKKPRKVILL 73 (470)
T ss_pred CEEEEEeE-hHHHHHHHHHHHHCCC--eEEEEeCCHHH--HHHHHHhhhhcCCccee---cCCHHHHHhcCCCCCEEEEE
Confidence 58999999 9999999999999998 89999997622 112221100 111222 345666665 58988887
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhh-CCCeEEEEecCCC
Q 018512 118 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKC-CPNATVNLISNPV 162 (354)
Q Consensus 118 ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~-~p~a~viv~tNPv 162 (354)
...+ ..+.++++.+..+ .|+.+||..+|-.
T Consensus 74 v~~~---------------~~v~~vi~~l~~~L~~g~iIID~gn~~ 104 (470)
T PTZ00142 74 IKAG---------------EAVDETIDNLLPLLEKGDIIIDGGNEW 104 (470)
T ss_pred eCCh---------------HHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence 3211 2333444444433 3677788887644
No 314
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=96.73 E-value=0.016 Score=53.53 Aligned_cols=35 Identities=20% Similarity=0.267 Sum_probs=31.6
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 78 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~ 78 (354)
.+++.|+||+|.+|..++..|+..|. +|+++|+++
T Consensus 6 ~k~vlVtGas~gIG~~ia~~l~~~G~--~V~~~~r~~ 40 (263)
T PRK06200 6 GQVALITGGGSGIGRALVERFLAEGA--RVAVLERSA 40 (263)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCH
Confidence 45899999999999999999999887 899999875
No 315
>PRK07904 short chain dehydrogenase; Provisional
Probab=96.73 E-value=0.025 Score=52.22 Aligned_cols=115 Identities=16% Similarity=0.161 Sum_probs=65.2
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCC-CCcEEEEEecCCc---hhHHHHHhcCCCCCeEEEE----eCCCcH----Hhhh
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINP-LVSVLHLYDVVNT---PGVTADISHMDTGAVVRGF----LGQPQL----ENAL 108 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~-~~~ei~L~D~~~~---~g~~~dl~~~~~~~~v~~~----~~~~d~----~~al 108 (354)
++++|.|+||+|.+|.+++..|+..+ . .|++.+++.. .....++.... ...+..+ ....+. ++..
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg~--~V~~~~r~~~~~~~~~~~~l~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~ 83 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAPA--RVVLAALPDDPRRDAAVAQMKAAG-ASSVEVIDFDALDTDSHPKVIDAAF 83 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCCC--eEEEEeCCcchhHHHHHHHHHhcC-CCceEEEEecCCChHHHHHHHHHHH
Confidence 34589999999999999999998875 5 8899998752 22233443321 1122221 111121 1212
Q ss_pred --CCCcEEEEcCCCCCCCCC---CH---HHHHHHHHH----HHHHHHHHHhhhCCCeEEEEec
Q 018512 109 --TGMDLVIIPAGVPRKPGM---TR---DDLFNINAG----IVRTLCEGIAKCCPNATVNLIS 159 (354)
Q Consensus 109 --~~aDvVIi~ag~~~~~g~---~r---~d~~~~n~~----~~~~i~~~i~~~~p~a~viv~t 159 (354)
.+.|++|+.+|....... +. .+.+..|+. ..+.+.+.+++... +.|+++|
T Consensus 84 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~-~~iv~is 145 (253)
T PRK07904 84 AGGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGF-GQIIAMS 145 (253)
T ss_pred hcCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCC-ceEEEEe
Confidence 379999998876532211 11 123555654 33556777766544 4455554
No 316
>PRK06123 short chain dehydrogenase; Provisional
Probab=96.72 E-value=0.062 Score=48.84 Aligned_cols=146 Identities=16% Similarity=0.116 Sum_probs=75.7
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC---chhHHHHHhcCCCCCe-EEE-EeCCCcHHhhh-------CCC
Q 018512 44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAV-VRG-FLGQPQLENAL-------TGM 111 (354)
Q Consensus 44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~---~~g~~~dl~~~~~~~~-v~~-~~~~~d~~~al-------~~a 111 (354)
.+.|+||+|.+|+.++..|+..|. .+++.+.+. ......++........ +.. ......+++++ ...
T Consensus 4 ~~lVtG~~~~iG~~~a~~l~~~G~--~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (248)
T PRK06123 4 VMIITGASRGIGAATALLAAERGY--AVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL 81 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCC--eEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence 689999999999999999998886 777777543 1122222332211111 111 11111222333 367
Q ss_pred cEEEEcCCCCCCC----CCCH---HHHHHHHHHHHHHHHHHHhhh----C--CCeEEEEecCCCCCchHHHHHHHHHhCC
Q 018512 112 DLVIIPAGVPRKP----GMTR---DDLFNINAGIVRTLCEGIAKC----C--PNATVNLISNPVNSTVPIAAEVFKKAGT 178 (354)
Q Consensus 112 DvVIi~ag~~~~~----g~~r---~d~~~~n~~~~~~i~~~i~~~----~--p~a~viv~tNPv~~~~~~~~~~~~~~~~ 178 (354)
|+||+++|..... ..+. ...+..|+.....+.+.+.+. . .++.|+++|...... +
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~------------~ 149 (248)
T PRK06123 82 DALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARL------------G 149 (248)
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcC------------C
Confidence 9999999864321 1122 234566666554444443322 1 245666666533221 1
Q ss_pred CCCC-CEEEeccchHHHHHHHHHHHh
Q 018512 179 YDPK-KLLGVTMLDVVRANTFVAEVL 203 (354)
Q Consensus 179 ~p~~-kviG~t~ld~~r~~~~la~~l 203 (354)
.|.. -.++.+......+...+++.+
T Consensus 150 ~~~~~~~Y~~sKaa~~~~~~~la~~~ 175 (248)
T PRK06123 150 SPGEYIDYAASKGAIDTMTIGLAKEV 175 (248)
T ss_pred CCCCccchHHHHHHHHHHHHHHHHHh
Confidence 1211 124444433445666677776
No 317
>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=96.72 E-value=0.011 Score=56.35 Aligned_cols=64 Identities=16% Similarity=0.277 Sum_probs=44.5
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCC---CcEEEEcC
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTG---MDLVIIPA 118 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~---aDvVIi~a 118 (354)
|||+|||. |.+|+.++..|...+. +|+++|+++.. ...+.+.. ... ..+.++.+++ +|+||++.
T Consensus 1 m~Ig~IGl-G~mG~~mA~~L~~~g~--~v~v~dr~~~~--~~~~~~~g----~~~---~~s~~~~~~~~~~advVi~~v 67 (299)
T PRK12490 1 MKLGLIGL-GKMGGNMAERLREDGH--EVVGYDVNQEA--VDVAGKLG----ITA---RHSLEELVSKLEAPRTIWVMV 67 (299)
T ss_pred CEEEEEcc-cHHHHHHHHHHHhCCC--EEEEEECCHHH--HHHHHHCC----Cee---cCCHHHHHHhCCCCCEEEEEe
Confidence 58999999 9999999999998887 89999987522 12232221 111 2345565555 68999974
No 318
>PRK09134 short chain dehydrogenase; Provisional
Probab=96.71 E-value=0.019 Score=52.84 Aligned_cols=114 Identities=14% Similarity=0.132 Sum_probs=64.4
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC---chhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh------
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL------ 108 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~---~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al------ 108 (354)
.+++.|+||+|.+|.+++..|...|. .+++.+... ......++.... ..+..+. +-+| +.+++
T Consensus 9 ~k~vlItGas~giG~~la~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~~~~~~~~~~~~ 84 (258)
T PRK09134 9 PRAALVTGAARRIGRAIALDLAAHGF--DVAVHYNRSRDEAEALAAEIRALG--RRAVALQADLADEAEVRALVARASAA 84 (258)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 45899999999999999999998887 777776643 112222232221 1222211 1122 22233
Q ss_pred -CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhhC---CCeEEEEec
Q 018512 109 -TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKCC---PNATVNLIS 159 (354)
Q Consensus 109 -~~aDvVIi~ag~~~~~---g~~---r~d~~~~n~~~~~~i~~~i~~~~---p~a~viv~t 159 (354)
...|+||+++|..... ..+ ....+..|+.....+.+.+.++. ..+.+++++
T Consensus 85 ~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~ 145 (258)
T PRK09134 85 LGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMI 145 (258)
T ss_pred cCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEEC
Confidence 3479999999864321 122 23345667766666666555443 234555443
No 319
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=96.71 E-value=0.031 Score=50.57 Aligned_cols=114 Identities=14% Similarity=0.166 Sum_probs=63.6
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC---chhHHHHHhcCCCCCeEEEEe-CCCc---HHhh-------hCC
Q 018512 45 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQ---LENA-------LTG 110 (354)
Q Consensus 45 I~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~---~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~a-------l~~ 110 (354)
|.|+||+|.+|..++..|+..|. ++++++... ......++.+.. ..+..+. +-++ ..++ +..
T Consensus 1 vlItGas~giG~~~a~~l~~~G~--~v~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 76 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGF--EICVHYHSGRSDAESVVSAIQAQG--GNARLLQFDVADRVACRTLLEADIAEHGA 76 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHHcC--CeEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 57999999999999999999887 788887643 122223333322 1222211 1112 2222 234
Q ss_pred CcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHH----hhhCCCeEEEEecCCC
Q 018512 111 MDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEGI----AKCCPNATVNLISNPV 162 (354)
Q Consensus 111 aDvVIi~ag~~~~~g---~~---r~d~~~~n~~~~~~i~~~i----~~~~p~a~viv~tNPv 162 (354)
.|.+|..+|...... .+ ....+..|+.....+.+.+ .+..+.+.++++|...
T Consensus 77 i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~ 138 (239)
T TIGR01831 77 YYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVS 138 (239)
T ss_pred CCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchh
Confidence 689999888643221 12 2334566766555554432 2223456666666543
No 320
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=96.71 E-value=0.014 Score=54.84 Aligned_cols=121 Identities=21% Similarity=0.238 Sum_probs=79.7
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhC----CCC-----cEEEEEecCC--ch------hHHHHHhcCCCCCeEEEEeCCCc
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKIN----PLV-----SVLHLYDVVN--TP------GVTADISHMDTGAVVRGFLGQPQ 103 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~----~~~-----~ei~L~D~~~--~~------g~~~dl~~~~~~~~v~~~~~~~d 103 (354)
+..||+|.|| |..|..++.+|... |+. ..++++|.+. .. .....+.+.. .. . ...+
T Consensus 24 ~d~~iv~~GA-GsAg~gia~ll~~~~~~~G~~~eeA~~~i~~vD~~Gll~~~r~~l~~~~~~~a~~~-~~--~---~~~~ 96 (279)
T cd05312 24 SDQRILFLGA-GSAGIGIADLIVSAMVREGLSEEEARKKIWLVDSKGLLTKDRKDLTPFKKPFARKD-EE--K---EGKS 96 (279)
T ss_pred hhcEEEEECc-CHHHHHHHHHHHHHHHHcCCChhhccCeEEEEcCCCeEeCCCCcchHHHHHHHhhc-Cc--c---cCCC
Confidence 3469999999 99999999877654 652 5899999975 11 1111222211 11 1 1357
Q ss_pred HHhhhC--CCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCC--CchHHHHHHHHHhCCC
Q 018512 104 LENALT--GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN--STVPIAAEVFKKAGTY 179 (354)
Q Consensus 104 ~~~al~--~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~--~~~~~~~~~~~~~~~~ 179 (354)
+.++++ ++|++|=+.+.+. -+.+++.+.|.+++++.+|+-.|||.. -.++ +-.++.+
T Consensus 97 L~e~i~~v~ptvlIG~S~~~g--------------~ft~evv~~Ma~~~~~PIIFaLSNPt~~~E~~p---e~a~~~t-- 157 (279)
T cd05312 97 LLEVVKAVKPTVLIGLSGVGG--------------AFTEEVVRAMAKSNERPIIFALSNPTSKAECTA---EDAYKWT-- 157 (279)
T ss_pred HHHHHHhcCCCEEEEeCCCCC--------------CCCHHHHHHHHhcCCCCEEEECCCcCCccccCH---HHHHHhh--
Confidence 899999 9999988755432 144688889999999999999999986 4443 2223332
Q ss_pred CCCCEEEe
Q 018512 180 DPKKLLGV 187 (354)
Q Consensus 180 p~~kviG~ 187 (354)
+.+.+++.
T Consensus 158 ~G~ai~AT 165 (279)
T cd05312 158 DGRALFAS 165 (279)
T ss_pred cCCEEEEe
Confidence 12447777
No 321
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=96.69 E-value=0.01 Score=54.93 Aligned_cols=35 Identities=20% Similarity=0.268 Sum_probs=31.5
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 78 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~ 78 (354)
.+++.|+||+|.+|..++..|+..|. +|++.|++.
T Consensus 9 ~k~vlItG~s~gIG~~la~~l~~~G~--~v~~~~~~~ 43 (266)
T PRK06171 9 GKIIIVTGGSSGIGLAIVKELLANGA--NVVNADIHG 43 (266)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCc
Confidence 35899999999999999999999998 899999875
No 322
>PRK05693 short chain dehydrogenase; Provisional
Probab=96.67 E-value=0.024 Score=52.77 Aligned_cols=34 Identities=26% Similarity=0.227 Sum_probs=30.6
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 78 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~ 78 (354)
+++.|+||+|.+|..++..|+..|. +|++.+++.
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~--~V~~~~r~~ 35 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGY--EVWATARKA 35 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC--EEEEEeCCH
Confidence 4799999999999999999998887 899999865
No 323
>PRK12491 pyrroline-5-carboxylate reductase; Reviewed
Probab=96.67 E-value=0.0088 Score=56.35 Aligned_cols=66 Identities=12% Similarity=0.170 Sum_probs=46.6
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCC--CcEEEEEecCCchhHHHHHhc-CCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPL--VSVLHLYDVVNTPGVTADISH-MDTGAVVRGFLGQPQLENALTGMDLVIIPA 118 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~--~~ei~L~D~~~~~g~~~dl~~-~~~~~~v~~~~~~~d~~~al~~aDvVIi~a 118 (354)
+||+|||+ |++|.+++..|+..++ ..+|+.+|+++.. ...+.+ .. +... .+..+.+++||+||++.
T Consensus 3 ~~IgfIG~-G~MG~aia~~L~~~g~~~~~~I~v~~r~~~~--~~~l~~~~g----~~~~---~~~~e~~~~aDiIiLav 71 (272)
T PRK12491 3 KQIGFIGC-GNMGIAMIGGMINKNIVSPDQIICSDLNVSN--LKNASDKYG----ITIT---TNNNEVANSADILILSI 71 (272)
T ss_pred CeEEEECc-cHHHHHHHHHHHHCCCCCCceEEEECCCHHH--HHHHHHhcC----cEEe---CCcHHHHhhCCEEEEEe
Confidence 58999998 9999999999998874 3579999986521 222322 11 2221 24457789999999984
No 324
>PRK07677 short chain dehydrogenase; Provisional
Probab=96.67 E-value=0.026 Score=51.78 Aligned_cols=113 Identities=11% Similarity=0.082 Sum_probs=65.1
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCc---HHhh-------hC
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENA-------LT 109 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~a-------l~ 109 (354)
+++.|+||+|.+|..++..|+..|. .|++.|++. ......++.... ..+..+. +-++ .+++ +.
T Consensus 2 k~~lItG~s~giG~~ia~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 77 (252)
T PRK07677 2 KVVIITGGSSGMGKAMAKRFAEEGA--NVVITGRTKEKLEEAKLEIEQFP--GQVLTVQMDVRNPEDVQKMVEQIDEKFG 77 (252)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 4799999999999999999999888 899999875 222223333221 1222211 1112 2221 24
Q ss_pred CCcEEEEcCCCCCC---CCCCH---HHHHHHHHHHHHHHHHHH----hhhCCCeEEEEec
Q 018512 110 GMDLVIIPAGVPRK---PGMTR---DDLFNINAGIVRTLCEGI----AKCCPNATVNLIS 159 (354)
Q Consensus 110 ~aDvVIi~ag~~~~---~g~~r---~d~~~~n~~~~~~i~~~i----~~~~p~a~viv~t 159 (354)
..|+||+++|.... ...+. ...+..|+.....+.+.+ .+....+.++++|
T Consensus 78 ~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~is 137 (252)
T PRK07677 78 RIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMV 137 (252)
T ss_pred CccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEc
Confidence 67999999875321 12222 234555655444444444 3333456777766
No 325
>PRK08324 short chain dehydrogenase; Validated
Probab=96.67 E-value=0.022 Score=60.53 Aligned_cols=114 Identities=21% Similarity=0.269 Sum_probs=65.0
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEE-eCCCc---HHhhh------
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGF-LGQPQ---LENAL------ 108 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~-~~~~d---~~~al------ 108 (354)
+.++|.|+||+|.+|+.++..|+..|. +|+++|++.. .....++... ..+..+ .+-++ ..+++
T Consensus 421 ~gk~vLVTGasggIG~~la~~L~~~Ga--~Vvl~~r~~~~~~~~~~~l~~~---~~v~~v~~Dvtd~~~v~~~~~~~~~~ 495 (681)
T PRK08324 421 AGKVALVTGAAGGIGKATAKRLAAEGA--CVVLADLDEEAAEAAAAELGGP---DRALGVACDVTDEAAVQAAFEEAALA 495 (681)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCcC--EEEEEeCCHHHHHHHHHHHhcc---CcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 346899999999999999999998887 8999999762 2222223221 111111 01112 22223
Q ss_pred -CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHH----HHHHhhhCCCeEEEEec
Q 018512 109 -TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTL----CEGIAKCCPNATVNLIS 159 (354)
Q Consensus 109 -~~aDvVIi~ag~~~~~---g~~r---~d~~~~n~~~~~~i----~~~i~~~~p~a~viv~t 159 (354)
.+.|+||+++|..... ..+. ...+..|+.....+ .+.+++....+.|+++|
T Consensus 496 ~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vs 557 (681)
T PRK08324 496 FGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIA 557 (681)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEEC
Confidence 3789999999864321 1121 12334455444444 55555444335566555
No 326
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=96.66 E-value=0.024 Score=51.68 Aligned_cols=35 Identities=29% Similarity=0.286 Sum_probs=31.4
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 78 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~ 78 (354)
.+++.|+||+|.+|+.++..|+..|. +++++|.+.
T Consensus 8 ~k~vlItGas~~iG~~la~~l~~~G~--~v~~~~~~~ 42 (252)
T PRK08220 8 GKTVWVTGAAQGIGYAVALAFVEAGA--KVIGFDQAF 42 (252)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEecch
Confidence 45899999999999999999999887 899999865
No 327
>PRK08703 short chain dehydrogenase; Provisional
Probab=96.66 E-value=0.09 Score=47.65 Aligned_cols=35 Identities=17% Similarity=0.223 Sum_probs=31.7
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 78 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~ 78 (354)
.++|.|+||+|.+|.+++..|+..|. .|++++++.
T Consensus 6 ~k~vlItG~sggiG~~la~~l~~~g~--~V~~~~r~~ 40 (239)
T PRK08703 6 DKTILVTGASQGLGEQVAKAYAAAGA--TVILVARHQ 40 (239)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHcCC--EEEEEeCCh
Confidence 35899999999999999999998887 899999876
No 328
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=96.65 E-value=0.0077 Score=53.52 Aligned_cols=76 Identities=20% Similarity=0.233 Sum_probs=49.4
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEE--eCCCcHHhhhCCCcEEEE
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGF--LGQPQLENALTGMDLVII 116 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~--~~~~d~~~al~~aDvVIi 116 (354)
+.+++.|+||+|.+|..++..|...+. +|.+++++.. .....++.+.. ...+... ....++.++++++|+||.
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~--~V~l~~R~~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~diVi~ 103 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGA--RVVLVGRDLERAQKAADSLRARF-GEGVGAVETSDDAARAAAIKGADVVFA 103 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHhhc-CCcEEEeeCCCHHHHHHHHhcCCEEEE
Confidence 456999999889999999999988775 8999998752 22222332211 1122221 111234578899999888
Q ss_pred cCC
Q 018512 117 PAG 119 (354)
Q Consensus 117 ~ag 119 (354)
+..
T Consensus 104 at~ 106 (194)
T cd01078 104 AGA 106 (194)
T ss_pred CCC
Confidence 654
No 329
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=96.64 E-value=0.01 Score=55.89 Aligned_cols=145 Identities=23% Similarity=0.237 Sum_probs=88.1
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhC--CCcEEEEcCCC
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT--GMDLVIIPAGV 120 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~--~aDvVIi~ag~ 120 (354)
|||.|+|++|++|+.+...|. .+. +|+-.|..+ +|+.+.. .+.+.++ .-|+||++|.+
T Consensus 1 M~iLi~G~~GqLG~~L~~~l~-~~~--~v~a~~~~~-----~Ditd~~------------~v~~~i~~~~PDvVIn~AAy 60 (281)
T COG1091 1 MKILITGANGQLGTELRRALP-GEF--EVIATDRAE-----LDITDPD------------AVLEVIRETRPDVVINAAAY 60 (281)
T ss_pred CcEEEEcCCChHHHHHHHHhC-CCc--eEEeccCcc-----ccccChH------------HHHHHHHhhCCCEEEECccc
Confidence 679999999999999998887 444 777777654 3333322 1234443 56999999987
Q ss_pred CCCCC--CCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEe-cCCC--CCchHHHHHHHHHhCC-CCCCCEEEeccchHHH
Q 018512 121 PRKPG--MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI-SNPV--NSTVPIAAEVFKKAGT-YDPKKLLGVTMLDVVR 194 (354)
Q Consensus 121 ~~~~g--~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~-tNPv--~~~~~~~~~~~~~~~~-~p~~kviG~t~ld~~r 194 (354)
..-.. ..+..-+.-|.....++++..++.+ +++|.+ |--| +.-.. -++.+. -.|..++|-+.+....
T Consensus 61 t~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~g--a~lVhiSTDyVFDG~~~~-----~Y~E~D~~~P~nvYG~sKl~GE~ 133 (281)
T COG1091 61 TAVDKAESEPELAFAVNATGAENLARAAAEVG--ARLVHISTDYVFDGEKGG-----PYKETDTPNPLNVYGRSKLAGEE 133 (281)
T ss_pred cccccccCCHHHHHHhHHHHHHHHHHHHHHhC--CeEEEeecceEecCCCCC-----CCCCCCCCCChhhhhHHHHHHHH
Confidence 64322 3355566889999999999999874 444444 3333 11100 011111 2245677776544332
Q ss_pred HHHHHHHHhCCCCCCC---cceEEeecCC
Q 018512 195 ANTFVAEVLGLDPRDV---DVPVVGGHAG 220 (354)
Q Consensus 195 ~~~~la~~l~v~~~~v---~~~v~G~hg~ 220 (354)
+ .+..+ +..+ ..|++|++|.
T Consensus 134 ~----v~~~~--~~~~I~Rtswv~g~~g~ 156 (281)
T COG1091 134 A----VRAAG--PRHLILRTSWVYGEYGN 156 (281)
T ss_pred H----HHHhC--CCEEEEEeeeeecCCCC
Confidence 2 22222 3333 5799999986
No 330
>PRK13243 glyoxylate reductase; Reviewed
Probab=96.63 E-value=0.012 Score=57.01 Aligned_cols=99 Identities=20% Similarity=0.267 Sum_probs=62.6
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512 40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 119 (354)
Q Consensus 40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag 119 (354)
-..++|.|||. |.+|+.+|..|..-|. +|..+|+...... +... . .. . .++.+.+++||+|++...
T Consensus 148 L~gktvgIiG~-G~IG~~vA~~l~~~G~--~V~~~d~~~~~~~--~~~~-~----~~-~---~~l~ell~~aDiV~l~lP 213 (333)
T PRK13243 148 VYGKTIGIIGF-GRIGQAVARRAKGFGM--RILYYSRTRKPEA--EKEL-G----AE-Y---RPLEELLRESDFVSLHVP 213 (333)
T ss_pred CCCCEEEEECc-CHHHHHHHHHHHHCCC--EEEEECCCCChhh--HHHc-C----CE-e---cCHHHHHhhCCEEEEeCC
Confidence 34579999999 9999999999987776 8999998652211 1111 1 11 1 256788999999999853
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec--CCCCCc
Q 018512 120 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS--NPVNST 165 (354)
Q Consensus 120 ~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t--NPv~~~ 165 (354)
.. + .+..++.+ +.+....|.+++|+++ ..+|.-
T Consensus 214 ~t--~---------~T~~~i~~--~~~~~mk~ga~lIN~aRg~~vd~~ 248 (333)
T PRK13243 214 LT--K---------ETYHMINE--ERLKLMKPTAILVNTARGKVVDTK 248 (333)
T ss_pred CC--h---------HHhhccCH--HHHhcCCCCeEEEECcCchhcCHH
Confidence 22 1 11111211 2333334789999986 445543
No 331
>PRK07831 short chain dehydrogenase; Provisional
Probab=96.63 E-value=0.13 Score=47.40 Aligned_cols=158 Identities=13% Similarity=0.090 Sum_probs=80.2
Q ss_pred CCeEEEEcCCC-chHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCc---HHhh-------
Q 018512 42 GFKVAILGAAG-GIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENA------- 107 (354)
Q Consensus 42 ~~kI~IiGa~G-~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~a------- 107 (354)
.+++.|+||+| .+|..++..|+..|. .|++.|++. ......++........+..+. +-.+ .+++
T Consensus 17 ~k~vlItG~sg~gIG~~ia~~l~~~G~--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 94 (262)
T PRK07831 17 GKVVLVTAAAGTGIGSATARRALEEGA--RVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVER 94 (262)
T ss_pred CCEEEEECCCcccHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence 45899999977 599999999999887 799999865 222223333211111222221 1112 2222
Q ss_pred hCCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHH----HHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhC
Q 018512 108 LTGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVR----TLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAG 177 (354)
Q Consensus 108 l~~aDvVIi~ag~~~~~---g~~---r~d~~~~n~~~~~----~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~ 177 (354)
+...|+||+++|..... ..+ ..+.+..|+.... .+.+.+.+....+.|++++......
T Consensus 95 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~------------ 162 (262)
T PRK07831 95 LGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWR------------ 162 (262)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcC------------
Confidence 23679999999864211 111 2223444554443 4444444333245555554322111
Q ss_pred CCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512 178 TYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV 215 (354)
Q Consensus 178 ~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~ 215 (354)
+.+..-.++.+...-..+.+.+|..+. +..+++..+
T Consensus 163 ~~~~~~~Y~~sKaal~~~~~~la~e~~--~~gI~v~~i 198 (262)
T PRK07831 163 AQHGQAHYAAAKAGVMALTRCSALEAA--EYGVRINAV 198 (262)
T ss_pred CCCCCcchHHHHHHHHHHHHHHHHHhC--ccCeEEEEE
Confidence 122233445443334456666666653 344544333
No 332
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.62 E-value=0.035 Score=50.98 Aligned_cols=114 Identities=13% Similarity=0.160 Sum_probs=63.8
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEE-EeCCCcHHhh-------hCCCcE
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENA-------LTGMDL 113 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~~~d~~~a-------l~~aDv 113 (354)
.+++.|+||+|.+|..++..|+..|. +|++.+.+.. ....++.+... ..+.. .....+..++ +...|+
T Consensus 7 ~k~~lItGas~gIG~~~a~~l~~~G~--~v~~~~~~~~-~~~~~l~~~~~-~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 82 (255)
T PRK06463 7 GKVALITGGTRGIGRAIAEAFLREGA--KVAVLYNSAE-NEAKELREKGV-FTIKCDVGNRDQVKKSKEVVEKEFGRVDV 82 (255)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCcH-HHHHHHHhCCC-eEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 46899999999999999999999887 7888765431 11122322111 01111 1111122222 246799
Q ss_pred EEEcCCCCCCC---CCCHH---HHHHHHHHH----HHHHHHHHhhhCCCeEEEEecC
Q 018512 114 VIIPAGVPRKP---GMTRD---DLFNINAGI----VRTLCEGIAKCCPNATVNLISN 160 (354)
Q Consensus 114 VIi~ag~~~~~---g~~r~---d~~~~n~~~----~~~i~~~i~~~~p~a~viv~tN 160 (354)
||+++|..... ..+.. ..+..|+.. .+.+.+.+++.. .+.||++|.
T Consensus 83 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~g~iv~isS 138 (255)
T PRK06463 83 LVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSK-NGAIVNIAS 138 (255)
T ss_pred EEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcC
Confidence 99999874321 12222 234456554 566666665433 455666553
No 333
>PRK05872 short chain dehydrogenase; Provisional
Probab=96.62 E-value=0.024 Score=53.63 Aligned_cols=115 Identities=23% Similarity=0.267 Sum_probs=66.1
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEE-eCCCcH---Hh-------h
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGF-LGQPQL---EN-------A 107 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~-~~~~d~---~~-------a 107 (354)
+..++.|+||+|.+|..++..|+..|. +|++.+++.. .....++.. ...+..+ .+-+|. ++ .
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~l~~~~~~l~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 82 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGA--KLALVDLEEAELAALAAELGG---DDRVLTVVADVTDLAAMQAAAEEAVER 82 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhcC---CCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 345899999999999999999999987 8999998752 222233321 1111110 111221 11 2
Q ss_pred hCCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHhhhC--CCeEEEEecC
Q 018512 108 LTGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKCC--PNATVNLISN 160 (354)
Q Consensus 108 l~~aDvVIi~ag~~~~~---g~~r---~d~~~~n~~~~~~i~~~i~~~~--p~a~viv~tN 160 (354)
+...|+||+.+|..... ..+. ...+.-|+.....+++.+..+. ..+.|+++|.
T Consensus 83 ~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS 143 (296)
T PRK05872 83 FGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSS 143 (296)
T ss_pred cCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeC
Confidence 35689999999864311 1122 2334556665555555543321 2455666653
No 334
>PRK06523 short chain dehydrogenase; Provisional
Probab=96.61 E-value=0.004 Score=57.32 Aligned_cols=36 Identities=17% Similarity=0.145 Sum_probs=32.0
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 78 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~ 78 (354)
+.++|.|+||+|.+|+.++..|+..|. +|++++++.
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~--~v~~~~r~~ 43 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGA--RVVTTARSR 43 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCC--EEEEEeCCh
Confidence 346899999999999999999999887 899999875
No 335
>PRK07062 short chain dehydrogenase; Provisional
Probab=96.61 E-value=0.073 Score=49.08 Aligned_cols=116 Identities=16% Similarity=0.197 Sum_probs=65.5
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEE-eCCCcH---H-------hhh
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF-LGQPQL---E-------NAL 108 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~-~~~~d~---~-------~al 108 (354)
.+.+.|+||+|.+|..++..|+..|. +|++.+++. ......++........+..+ .+-+|. . +.+
T Consensus 8 ~k~~lItGas~giG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 85 (265)
T PRK07062 8 GRVAVVTGGSSGIGLATVELLLEAGA--SVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARF 85 (265)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhc
Confidence 35799999999999999999999988 899999876 22223333322111122221 111222 1 123
Q ss_pred CCCcEEEEcCCCCCCC---CCCHH---HHHHHH----HHHHHHHHHHHhhhCCCeEEEEecC
Q 018512 109 TGMDLVIIPAGVPRKP---GMTRD---DLFNIN----AGIVRTLCEGIAKCCPNATVNLISN 160 (354)
Q Consensus 109 ~~aDvVIi~ag~~~~~---g~~r~---d~~~~n----~~~~~~i~~~i~~~~p~a~viv~tN 160 (354)
...|++|+.||..... ..+.. ..+..| +...+.+.+.+++.. .+.|+++|.
T Consensus 86 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS 146 (265)
T PRK07062 86 GGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASA-AASIVCVNS 146 (265)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC-CcEEEEecc
Confidence 4679999999864321 11211 222333 344566666665443 355666553
No 336
>COG1893 ApbA Ketopantoate reductase [Coenzyme metabolism]
Probab=96.61 E-value=0.01 Score=56.85 Aligned_cols=120 Identities=23% Similarity=0.247 Sum_probs=71.6
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc-hhHHH---HHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTA---DISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 118 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~-~g~~~---dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a 118 (354)
|||+|+|+ |.+|+.++..|.+.+. .|.++-+++. +..-. .+.+.......... .+.+ .+....+|+||++.
T Consensus 1 mkI~IlGa-GAvG~l~g~~L~~~g~--~V~~~~R~~~~~~l~~~GL~i~~~~~~~~~~~~-~~~~-~~~~~~~Dlviv~v 75 (307)
T COG1893 1 MKILILGA-GAIGSLLGARLAKAGH--DVTLLVRSRRLEALKKKGLRIEDEGGNFTTPVV-AATD-AEALGPADLVIVTV 75 (307)
T ss_pred CeEEEECC-cHHHHHHHHHHHhCCC--eEEEEecHHHHHHHHhCCeEEecCCCccccccc-cccC-hhhcCCCCEEEEEe
Confidence 79999999 9999999999999884 6666666542 11111 11111110111111 1122 46678999999985
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCE-EEeccc
Q 018512 119 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKL-LGVTML 190 (354)
Q Consensus 119 g~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kv-iG~t~l 190 (354)
-.. ...+.++.+..+. ++.+|+..=|=.+.. +.+++. +|.++| .|+|..
T Consensus 76 Ka~----------------q~~~al~~l~~~~~~~t~vl~lqNG~g~~-----e~l~~~--~~~~~il~G~~~~ 126 (307)
T COG1893 76 KAY----------------QLEEALPSLAPLLGPNTVVLFLQNGLGHE-----EELRKI--LPKETVLGGVTTH 126 (307)
T ss_pred ccc----------------cHHHHHHHhhhcCCCCcEEEEEeCCCcHH-----HHHHHh--CCcceEEEEEeee
Confidence 322 2345666666666 677888777877766 334443 455544 557654
No 337
>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=96.61 E-value=0.014 Score=55.65 Aligned_cols=64 Identities=16% Similarity=0.240 Sum_probs=44.1
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhC---CCcEEEEcC
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT---GMDLVIIPA 118 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~---~aDvVIi~a 118 (354)
|||+|||. |.+|+.++..|+..++ +|+++|+++.. ..++.+.. +.. ..+..+..+ ++|+||++.
T Consensus 1 m~Ig~IGl-G~MG~~mA~~L~~~g~--~v~v~dr~~~~--~~~~~~~g----~~~---~~~~~e~~~~~~~~dvvi~~v 67 (301)
T PRK09599 1 MQLGMIGL-GRMGGNMARRLLRGGH--EVVGYDRNPEA--VEALAEEG----ATG---ADSLEELVAKLPAPRVVWLMV 67 (301)
T ss_pred CEEEEEcc-cHHHHHHHHHHHHCCC--eEEEEECCHHH--HHHHHHCC----Cee---cCCHHHHHhhcCCCCEEEEEe
Confidence 68999999 9999999999999887 89999997622 12232222 111 123445454 479999874
No 338
>PRK06114 short chain dehydrogenase; Provisional
Probab=96.60 E-value=0.027 Score=51.76 Aligned_cols=116 Identities=19% Similarity=0.297 Sum_probs=63.8
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc---hhHHHHHhcCCCCCe-EEE-EeCCCcHHhhh-------C
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTGAV-VRG-FLGQPQLENAL-------T 109 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~---~g~~~dl~~~~~~~~-v~~-~~~~~d~~~al-------~ 109 (354)
.+++.|+||+|.+|+.++..|+..|. +|++.|++.. .....++.+...... +.. .....+..+++ .
T Consensus 8 ~k~~lVtG~s~gIG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g 85 (254)
T PRK06114 8 GQVAFVTGAGSGIGQRIAIGLAQAGA--DVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELG 85 (254)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 34899999999999999999999887 8999998652 222233433221111 111 11111222222 3
Q ss_pred CCcEEEEcCCCCCCCC---CCH---HHHHHHHHHHH----HHHHHHHhhhCCCeEEEEecC
Q 018512 110 GMDLVIIPAGVPRKPG---MTR---DDLFNINAGIV----RTLCEGIAKCCPNATVNLISN 160 (354)
Q Consensus 110 ~aDvVIi~ag~~~~~g---~~r---~d~~~~n~~~~----~~i~~~i~~~~p~a~viv~tN 160 (354)
.-|++|+++|...... .+. ...+..|+... +.+.+.+.+. ..+.++++|.
T Consensus 86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS 145 (254)
T PRK06114 86 ALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLEN-GGGSIVNIAS 145 (254)
T ss_pred CCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhc-CCcEEEEECc
Confidence 4699999998643211 122 22344565544 4444444433 2345565543
No 339
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=96.59 E-value=0.0074 Score=50.45 Aligned_cols=35 Identities=29% Similarity=0.396 Sum_probs=30.7
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 78 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~ 78 (354)
..||+|+|+ |.+|+.++..|+..|. .++.|+|.+.
T Consensus 2 ~~~v~iiG~-G~vGs~va~~L~~~Gv-~~i~lvD~d~ 36 (135)
T PF00899_consen 2 NKRVLIIGA-GGVGSEVAKNLARSGV-GKITLVDDDI 36 (135)
T ss_dssp T-EEEEEST-SHHHHHHHHHHHHHTT-SEEEEEESSB
T ss_pred CCEEEEECc-CHHHHHHHHHHHHhCC-CceeecCCcc
Confidence 359999999 9999999999999887 4899999874
No 340
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=96.59 E-value=0.02 Score=54.98 Aligned_cols=117 Identities=18% Similarity=0.244 Sum_probs=72.4
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCch--hHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEc
Q 018512 40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP 117 (354)
Q Consensus 40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~--g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ 117 (354)
.+.++|+|+|+ |.+|..++..|...+. .+|.++|++..+ ..+..+. ..+.. ..++.+++.++|+||.+
T Consensus 176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~-~~V~v~~r~~~ra~~la~~~g-----~~~~~---~~~~~~~l~~aDvVi~a 245 (311)
T cd05213 176 LKGKKVLVIGA-GEMGELAAKHLAAKGV-AEITIANRTYERAEELAKELG-----GNAVP---LDELLELLNEADVVISA 245 (311)
T ss_pred ccCCEEEEECc-HHHHHHHHHHHHHcCC-CEEEEEeCCHHHHHHHHHHcC-----CeEEe---HHHHHHHHhcCCEEEEC
Confidence 45679999999 9999999998887553 389999987522 2222221 11111 13567888999999998
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHH-hhh-CCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEeccc
Q 018512 118 AGVPRKPGMTRDDLFNINAGIVRTLCEGI-AKC-CPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTML 190 (354)
Q Consensus 118 ag~~~~~g~~r~d~~~~n~~~~~~i~~~i-~~~-~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~t~l 190 (354)
.+.+.. .++.+.+ ... .+..+++-.++|-|+-.. ...+|.-+++.+-++
T Consensus 246 t~~~~~----------------~~~~~~~~~~~~~~~~~viDlavPrdi~~~--------v~~l~~v~l~~vDdl 296 (311)
T cd05213 246 TGAPHY----------------AKIVERAMKKRSGKPRLIVDLAVPRDIEPE--------VGELEGVRLYTIDDL 296 (311)
T ss_pred CCCCch----------------HHHHHHHHhhCCCCCeEEEEeCCCCCCchh--------hccCCCcEEEEHHHh
Confidence 765531 1111221 111 245678888999987632 223555555655443
No 341
>PRK05599 hypothetical protein; Provisional
Probab=96.58 E-value=0.1 Score=47.83 Aligned_cols=146 Identities=13% Similarity=0.168 Sum_probs=78.8
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCc---H-------HhhhC
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---L-------ENALT 109 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d---~-------~~al~ 109 (354)
|.+.|+||++.+|..++..|. +|. .|++.++++ ++....++..... ..+..+. +-.| . .+.+.
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~--~Vil~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 76 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGE--DVVLAARRPEAAQGLASDLRQRGA-TSVHVLSFDAQDLDTHRELVKQTQELAG 76 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCC--EEEEEeCCHHHHHHHHHHHHhccC-CceEEEEcccCCHHHHHHHHHHHHHhcC
Confidence 468999999999999999988 464 899999876 3333344443221 1111110 1111 1 12235
Q ss_pred CCcEEEEcCCCCCCCC---CCH---HHHHHHH----HHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCC
Q 018512 110 GMDLVIIPAGVPRKPG---MTR---DDLFNIN----AGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTY 179 (354)
Q Consensus 110 ~aDvVIi~ag~~~~~g---~~r---~d~~~~n----~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~ 179 (354)
..|++|+.+|...... .+. .+....| +...+.+.+.+.+...++.|+++|.-.... +.
T Consensus 77 ~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~------------~~ 144 (246)
T PRK05599 77 EISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWR------------AR 144 (246)
T ss_pred CCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEecccccc------------CC
Confidence 6899999988643211 111 1222223 233345556665544457777776543322 12
Q ss_pred CCCCEEEeccchHHHHHHHHHHHhC
Q 018512 180 DPKKLLGVTMLDVVRANTFVAEVLG 204 (354)
Q Consensus 180 p~~kviG~t~ld~~r~~~~la~~l~ 204 (354)
|..-.++.+.-....+.+.++..++
T Consensus 145 ~~~~~Y~asKaa~~~~~~~la~el~ 169 (246)
T PRK05599 145 RANYVYGSTKAGLDAFCQGLADSLH 169 (246)
T ss_pred cCCcchhhHHHHHHHHHHHHHHHhc
Confidence 2223455554444556677777664
No 342
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=96.58 E-value=0.099 Score=48.39 Aligned_cols=32 Identities=22% Similarity=0.224 Sum_probs=28.0
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecC
Q 018512 44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV 77 (354)
Q Consensus 44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~ 77 (354)
.+.|+||+|.+|..++..|+..|. +|++.+.+
T Consensus 3 ~~lITGas~gIG~~~a~~l~~~G~--~V~~~~~~ 34 (267)
T TIGR02685 3 AAVVTGAAKRIGSSIAVALHQEGY--RVVLHYHR 34 (267)
T ss_pred EEEEeCCCCcHHHHHHHHHHhCCC--eEEEEcCC
Confidence 689999999999999999999887 78887543
No 343
>PRK08177 short chain dehydrogenase; Provisional
Probab=96.57 E-value=0.033 Score=50.20 Aligned_cols=34 Identities=18% Similarity=0.073 Sum_probs=31.1
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 78 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~ 78 (354)
+++.|+||+|.+|+.++..|+..|. +|+++|++.
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~--~V~~~~r~~ 35 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGW--QVTATVRGP 35 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCC--EEEEEeCCC
Confidence 4799999999999999999999887 899999876
No 344
>PRK07775 short chain dehydrogenase; Provisional
Probab=96.56 E-value=0.042 Score=51.21 Aligned_cols=34 Identities=21% Similarity=0.198 Sum_probs=30.4
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 78 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~ 78 (354)
+.+.|+||+|.+|.+++..|+..|. +|++.+++.
T Consensus 11 ~~vlVtGa~g~iG~~la~~L~~~G~--~V~~~~r~~ 44 (274)
T PRK07775 11 RPALVAGASSGIGAATAIELAAAGF--PVALGARRV 44 (274)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCH
Confidence 4799999999999999999999887 888888764
No 345
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.56 E-value=0.028 Score=53.56 Aligned_cols=79 Identities=25% Similarity=0.351 Sum_probs=50.1
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC---chhHHHHHhcCCCCCeEEEEe-CCCc---HHhh-----
Q 018512 40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQ---LENA----- 107 (354)
Q Consensus 40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~---~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~a----- 107 (354)
-+.+++.|+||+|.+|..++..|+..|. .|++.|... .+..+.++.... ..+..+. +-.| ..+.
T Consensus 10 l~~k~~lVTGas~gIG~~ia~~L~~~Ga--~Vv~~~~~~~~~~~~~~~~i~~~g--~~~~~~~~Dv~d~~~~~~~~~~~~ 85 (306)
T PRK07792 10 LSGKVAVVTGAAAGLGRAEALGLARLGA--TVVVNDVASALDASDVLDEIRAAG--AKAVAVAGDISQRATADELVATAV 85 (306)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC--EEEEecCCchhHHHHHHHHHHhcC--CeEEEEeCCCCCHHHHHHHHHHHH
Confidence 3456899999999999999999999887 899999754 222233343221 1222211 1112 1121
Q ss_pred -hCCCcEEEEcCCCCC
Q 018512 108 -LTGMDLVIIPAGVPR 122 (354)
Q Consensus 108 -l~~aDvVIi~ag~~~ 122 (354)
+...|+||+.||...
T Consensus 86 ~~g~iD~li~nAG~~~ 101 (306)
T PRK07792 86 GLGGLDIVVNNAGITR 101 (306)
T ss_pred HhCCCCEEEECCCCCC
Confidence 246899999998754
No 346
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=96.55 E-value=0.012 Score=50.01 Aligned_cols=75 Identities=23% Similarity=0.285 Sum_probs=49.9
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEc
Q 018512 40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP 117 (354)
Q Consensus 40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ 117 (354)
.+.++|+|+|+ |.+|..++..|...+ ..++.++|++.. ...+.++.... .... ..+..+.++++|+||.+
T Consensus 17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g-~~~v~v~~r~~~~~~~~~~~~~~~~--~~~~----~~~~~~~~~~~Dvvi~~ 88 (155)
T cd01065 17 LKGKKVLILGA-GGAARAVAYALAELG-AAKIVIVNRTLEKAKALAERFGELG--IAIA----YLDLEELLAEADLIINT 88 (155)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCC-CCEEEEEcCCHHHHHHHHHHHhhcc--ccee----ecchhhccccCCEEEeC
Confidence 34569999999 999999999998876 348999999762 22222222110 0111 12445668999999998
Q ss_pred CCCCC
Q 018512 118 AGVPR 122 (354)
Q Consensus 118 ag~~~ 122 (354)
.....
T Consensus 89 ~~~~~ 93 (155)
T cd01065 89 TPVGM 93 (155)
T ss_pred cCCCC
Confidence 65543
No 347
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=96.54 E-value=0.16 Score=46.86 Aligned_cols=148 Identities=14% Similarity=0.192 Sum_probs=77.2
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC---chhHHHHHhcCCCCCeEEEEe-CCCc---HH-------h
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQ---LE-------N 106 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~---~~g~~~dl~~~~~~~~v~~~~-~~~d---~~-------~ 106 (354)
+.++|.|+||++.+|..++..|+..|. .|++.+... ......++.... ...+..+. +-+| .+ +
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~--~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~ 83 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGV--NIAFTYNSNVEEANKIAEDLEQKY-GIKAKAYPLNILEPETYKELFKKIDE 83 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHHhc-CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 345899999999999999999999887 788775433 222233333211 11122111 1122 11 2
Q ss_pred hhCCCcEEEEcCCCCCC-----CC----CCH---HHHHHHHH----HHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHH
Q 018512 107 ALTGMDLVIIPAGVPRK-----PG----MTR---DDLFNINA----GIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAA 170 (354)
Q Consensus 107 al~~aDvVIi~ag~~~~-----~g----~~r---~d~~~~n~----~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~ 170 (354)
.+...|++|+.||.... .+ .+. ...+..|+ ...+.+.+.+++. +.+.|+++|...+..
T Consensus 84 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~----- 157 (260)
T PRK08416 84 DFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKV-GGGSIISLSSTGNLV----- 157 (260)
T ss_pred hcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhcc-CCEEEEEEecccccc-----
Confidence 23468999999875311 01 111 11233333 3344555555543 345566665433221
Q ss_pred HHHHHhCCCCCCCEEEeccchHHHHHHHHHHHhC
Q 018512 171 EVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLG 204 (354)
Q Consensus 171 ~~~~~~~~~p~~kviG~t~ld~~r~~~~la~~l~ 204 (354)
..|..-.++.+......+.+.++..++
T Consensus 158 -------~~~~~~~Y~asK~a~~~~~~~la~el~ 184 (260)
T PRK08416 158 -------YIENYAGHGTSKAAVETMVKYAATELG 184 (260)
T ss_pred -------CCCCcccchhhHHHHHHHHHHHHHHhh
Confidence 122222345555555567777777764
No 348
>PRK07201 short chain dehydrogenase; Provisional
Probab=96.53 E-value=0.038 Score=58.09 Aligned_cols=117 Identities=17% Similarity=0.171 Sum_probs=66.8
Q ss_pred CCCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCC---cHHhhhC--
Q 018512 38 GGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQP---QLENALT-- 109 (354)
Q Consensus 38 ~~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~---d~~~al~-- 109 (354)
++.+.+++.|+||+|.+|..++..|+..|. +|+++++++ ......++.... ..+..+. +-. +.+++++
T Consensus 367 ~~~~~k~vlItGas~giG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~~~~~~~~~ 442 (657)
T PRK07201 367 GPLVGKVVLITGASSGIGRATAIKVAEAGA--TVFLVARNGEALDELVAEIRAKG--GTAHAYTCDLTDSAAVDHTVKDI 442 (657)
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHH
Confidence 344456899999999999999999999887 899999876 222223333221 1122111 112 2233333
Q ss_pred -----CCcEEEEcCCCCCCCC---C-----CHHHHHHHHHHHH----HHHHHHHhhhCCCeEEEEec
Q 018512 110 -----GMDLVIIPAGVPRKPG---M-----TRDDLFNINAGIV----RTLCEGIAKCCPNATVNLIS 159 (354)
Q Consensus 110 -----~aDvVIi~ag~~~~~g---~-----~r~d~~~~n~~~~----~~i~~~i~~~~p~a~viv~t 159 (354)
..|++|+.||...... . .....+..|+... +.+.+.+++.. .+.|+++|
T Consensus 443 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~is 508 (657)
T PRK07201 443 LAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERR-FGHVVNVS 508 (657)
T ss_pred HHhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC-CCEEEEEC
Confidence 6899999998642211 0 1122345565544 44444444433 45566665
No 349
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.53 E-value=0.034 Score=50.24 Aligned_cols=107 Identities=18% Similarity=0.156 Sum_probs=62.4
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeC-CCc----HHhhhCCCcEEEE
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG-QPQ----LENALTGMDLVII 116 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~-~~d----~~~al~~aDvVIi 116 (354)
.+++.|+||+|.+|.+++..|+..|. +|++.|++.... . . ..+..+.. -++ ..+.+...|+||+
T Consensus 5 ~k~~lVtGas~~iG~~ia~~l~~~G~--~v~~~~r~~~~~----~---~--~~~~~~~~D~~~~~~~~~~~~~~id~lv~ 73 (235)
T PRK06550 5 TKTVLITGAASGIGLAQARAFLAQGA--QVYGVDKQDKPD----L---S--GNFHFLQLDLSDDLEPLFDWVPSVDILCN 73 (235)
T ss_pred CCEEEEcCCCchHHHHHHHHHHHCCC--EEEEEeCCcccc----c---C--CcEEEEECChHHHHHHHHHhhCCCCEEEE
Confidence 35899999999999999999999887 899999875210 0 0 11111110 011 1233567899999
Q ss_pred cCCCCCC--C--CCCH---HHHHHHHHHHHHHHHHHHhhh---CCCeEEEEec
Q 018512 117 PAGVPRK--P--GMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLIS 159 (354)
Q Consensus 117 ~ag~~~~--~--g~~r---~d~~~~n~~~~~~i~~~i~~~---~p~a~viv~t 159 (354)
.+|.... + ..+. ...+..|+.....+.+.+... ...+.++++|
T Consensus 74 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~s 126 (235)
T PRK06550 74 TAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMC 126 (235)
T ss_pred CCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEc
Confidence 9985421 1 1122 234556665555555554432 2235555555
No 350
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=96.53 E-value=0.017 Score=51.85 Aligned_cols=37 Identities=27% Similarity=0.409 Sum_probs=32.0
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512 40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 78 (354)
Q Consensus 40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~ 78 (354)
.+..||+|+|+ |.+|+.++..|+..|.. +|.++|.+.
T Consensus 19 l~~~~VlviG~-GglGs~ia~~La~~Gv~-~i~lvD~d~ 55 (202)
T TIGR02356 19 LLNSHVLIIGA-GGLGSPAALYLAGAGVG-TIVIVDDDH 55 (202)
T ss_pred hcCCCEEEECC-CHHHHHHHHHHHHcCCC-eEEEecCCE
Confidence 34558999999 99999999999998863 899999884
No 351
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=96.53 E-value=0.019 Score=54.82 Aligned_cols=110 Identities=20% Similarity=0.137 Sum_probs=70.8
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC---ch--hHHHHHhcCCCCCeEEEEeC-CCc---HHhhh--CC
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TP--GVTADISHMDTGAVVRGFLG-QPQ---LENAL--TG 110 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~---~~--g~~~dl~~~~~~~~v~~~~~-~~d---~~~al--~~ 110 (354)
+++|.|+||+|++|++.+..|+.+|. +++.+|... .. ..+..+.+. ...+..... -.| +++-+ ..
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy--~v~~vDNl~n~~~~sl~r~~~l~~~--~~~v~f~~~Dl~D~~~L~kvF~~~~ 77 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGY--GVVIVDNLNNSYLESLKRVRQLLGE--GKSVFFVEGDLNDAEALEKLFSEVK 77 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCC--cEEEEecccccchhHHHHHHHhcCC--CCceEEEEeccCCHHHHHHHHhhcC
Confidence 35899999999999999999999998 899999865 11 112223322 122322211 112 22222 45
Q ss_pred CcEEEEcCCCCCC-CC-CCHHHHHHHHHHHHHHHHHHHhhhCCCeEE
Q 018512 111 MDLVIIPAGVPRK-PG-MTRDDLFNINAGIVRTLCEGIAKCCPNATV 155 (354)
Q Consensus 111 aDvVIi~ag~~~~-~g-~~r~d~~~~n~~~~~~i~~~i~~~~p~a~v 155 (354)
-|-|++.|+.... +. +....+...|+-...++.+.|++++-..+|
T Consensus 78 fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V 124 (343)
T KOG1371|consen 78 FDAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALV 124 (343)
T ss_pred CceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEE
Confidence 7889998765421 11 224566778999999999999999844433
No 352
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.52 E-value=0.023 Score=51.62 Aligned_cols=35 Identities=26% Similarity=0.371 Sum_probs=31.3
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 78 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~ 78 (354)
..++.|+|++|.+|+.++..|+..|. .|+++|++.
T Consensus 5 ~~~~lItG~~g~iG~~~a~~l~~~G~--~vi~~~r~~ 39 (253)
T PRK08217 5 DKVIVITGGAQGLGRAMAEYLAQKGA--KLALIDLNQ 39 (253)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCH
Confidence 45899999999999999999999887 899999876
No 353
>PRK08818 prephenate dehydrogenase; Provisional
Probab=96.51 E-value=0.024 Score=55.69 Aligned_cols=56 Identities=23% Similarity=0.211 Sum_probs=43.3
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 118 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a 118 (354)
.+||+|||.+|.+|..++..|.... ..+|+.+|.. +.. ..+.++++++||+||++.
T Consensus 4 ~~~I~IIGl~GliGgslA~alk~~~-~~~V~g~D~~----------d~~----------~~~~~~~v~~aDlVilav 59 (370)
T PRK08818 4 QPVVGIVGSAGAYGRWLARFLRTRM-QLEVIGHDPA----------DPG----------SLDPATLLQRADVLIFSA 59 (370)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcC-CCEEEEEcCC----------ccc----------cCCHHHHhcCCCEEEEeC
Confidence 4699999988999999999998752 3389999973 110 124567889999999984
No 354
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=96.50 E-value=0.032 Score=53.61 Aligned_cols=92 Identities=20% Similarity=0.257 Sum_probs=60.0
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCC
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV 120 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~ 120 (354)
..++|+|+|. |.+|+.++..|..-|. +|..+|...... . . +..+....++++.+++||+|+++...
T Consensus 135 ~g~tvgIvG~-G~IG~~vA~~l~afG~--~V~~~~~~~~~~-----~--~----~~~~~~~~~l~e~l~~aDvvv~~lPl 200 (312)
T PRK15469 135 EDFTIGILGA-GVLGSKVAQSLQTWGF--PLRCWSRSRKSW-----P--G----VQSFAGREELSAFLSQTRVLINLLPN 200 (312)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCC--EEEEEeCCCCCC-----C--C----ceeecccccHHHHHhcCCEEEECCCC
Confidence 4569999999 9999999999987776 899999754110 0 0 01111123678999999999997422
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512 121 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 159 (354)
Q Consensus 121 ~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t 159 (354)
. ..|..++- .+.+.+..|++++||++
T Consensus 201 t-----------~~T~~li~--~~~l~~mk~ga~lIN~a 226 (312)
T PRK15469 201 T-----------PETVGIIN--QQLLEQLPDGAYLLNLA 226 (312)
T ss_pred C-----------HHHHHHhH--HHHHhcCCCCcEEEECC
Confidence 1 11222221 23344445789999986
No 355
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.50 E-value=0.026 Score=51.04 Aligned_cols=34 Identities=24% Similarity=0.304 Sum_probs=31.3
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 78 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~ 78 (354)
.+|.|+||+|.+|+.++..|+..|. +|+++++++
T Consensus 6 ~~vlItGa~g~iG~~~a~~l~~~G~--~V~~~~r~~ 39 (238)
T PRK05786 6 KKVAIIGVSEGLGYAVAYFALKEGA--QVCINSRNE 39 (238)
T ss_pred cEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCH
Confidence 4899999999999999999999888 899999876
No 356
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.50 E-value=0.09 Score=49.69 Aligned_cols=120 Identities=18% Similarity=0.225 Sum_probs=79.3
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEE----eCCCcHH-------hhh
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF----LGQPQLE-------NAL 108 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~----~~~~d~~-------~al 108 (354)
.+.|+|+||++-+|.++|+.++..|. .++|+.... ++-...++.......++... +..++.+ .-+
T Consensus 12 ~kvVvITGASsGIG~~lA~~la~~G~--~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~f 89 (282)
T KOG1205|consen 12 GKVVLITGASSGIGEALAYELAKRGA--KLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHF 89 (282)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHhCCC--ceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhc
Confidence 45799999999999999999999997 778888765 23333555543321112211 1112222 346
Q ss_pred CCCcEEEEcCCCCCCCCC-C---H---HHHHH----HHHHHHHHHHHHHhhhCCCeEEEEecCCCCCc
Q 018512 109 TGMDLVIIPAGVPRKPGM-T---R---DDLFN----INAGIVRTLCEGIAKCCPNATVNLISNPVNST 165 (354)
Q Consensus 109 ~~aDvVIi~ag~~~~~g~-~---r---~d~~~----~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~ 165 (354)
.+.|+.|..||..+ .+. + . ...+. ..+...+...+.|++.+ ++.|++++...+.+
T Consensus 90 g~vDvLVNNAG~~~-~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~-~GhIVvisSiaG~~ 155 (282)
T KOG1205|consen 90 GRVDVLVNNAGISL-VGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRN-DGHIVVISSIAGKM 155 (282)
T ss_pred CCCCEEEecCcccc-ccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcC-CCeEEEEecccccc
Confidence 89999999999887 331 1 1 12223 34678888999999887 88888887766555
No 357
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=96.49 E-value=0.03 Score=49.14 Aligned_cols=33 Identities=39% Similarity=0.550 Sum_probs=29.7
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512 44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 78 (354)
Q Consensus 44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~ 78 (354)
||+|+|+ |.+|+.++..|+..|.. +++|+|.+.
T Consensus 1 ~VlViG~-GglGs~ia~~La~~Gvg-~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAGA-GGLGSNIAVLLARSGVG-NLKLVDFDV 33 (174)
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCC-eEEEEeCCE
Confidence 6899999 99999999999998874 899999985
No 358
>PRK05708 2-dehydropantoate 2-reductase; Provisional
Probab=96.48 E-value=0.04 Score=52.67 Aligned_cols=115 Identities=16% Similarity=0.113 Sum_probs=68.6
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcC-------CCCC-eEEEEeCCCcHHhhhCCCcE
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHM-------DTGA-VVRGFLGQPQLENALTGMDL 113 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~-------~~~~-~v~~~~~~~d~~~al~~aDv 113 (354)
.|||+|+|+ |.||+.++..|...|. +|.++++... ....+... .... .+... ..+ .+.....|+
T Consensus 2 ~m~I~IiGa-GaiG~~~a~~L~~~G~--~V~lv~r~~~--~~~~i~~~~Gl~i~~~g~~~~~~~~--~~~-~~~~~~~D~ 73 (305)
T PRK05708 2 SMTWHILGA-GSLGSLWACRLARAGL--PVRLILRDRQ--RLAAYQQAGGLTLVEQGQASLYAIP--AET-ADAAEPIHR 73 (305)
T ss_pred CceEEEECC-CHHHHHHHHHHHhCCC--CeEEEEechH--HHHHHhhcCCeEEeeCCcceeeccC--CCC-cccccccCE
Confidence 479999999 9999999999998887 8999998631 11111110 0000 01111 111 123567899
Q ss_pred EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhh-CCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe
Q 018512 114 VIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKC-CPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV 187 (354)
Q Consensus 114 VIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~-~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~ 187 (354)
||++.-.. -..+.++.++.+ .++..|+..-|=++.... +.+. +|.+++++-
T Consensus 74 viv~vK~~----------------~~~~al~~l~~~l~~~t~vv~lQNGv~~~e~-----l~~~--~~~~~v~~g 125 (305)
T PRK05708 74 LLLACKAY----------------DAEPAVASLAHRLAPGAELLLLQNGLGSQDA-----VAAR--VPHARCIFA 125 (305)
T ss_pred EEEECCHH----------------hHHHHHHHHHhhCCCCCEEEEEeCCCCCHHH-----HHHh--CCCCcEEEE
Confidence 99984211 122334445444 378888888898877643 2343 566677665
No 359
>PRK05479 ketol-acid reductoisomerase; Provisional
Probab=96.46 E-value=0.022 Score=55.03 Aligned_cols=68 Identities=18% Similarity=0.111 Sum_probs=47.6
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512 39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 118 (354)
Q Consensus 39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a 118 (354)
..+.+||+|||. |++|.+++..|...|. +|+..+.+....... ..... +.. .+..+++++||+|+++.
T Consensus 14 ~L~gktIgIIG~-GsmG~AlA~~L~~sG~--~Vvv~~r~~~~s~~~-A~~~G----~~~----~s~~eaa~~ADVVvLaV 81 (330)
T PRK05479 14 LIKGKKVAIIGY-GSQGHAHALNLRDSGV--DVVVGLREGSKSWKK-AEADG----FEV----LTVAEAAKWADVIMILL 81 (330)
T ss_pred hhCCCEEEEEee-HHHHHHHHHHHHHCCC--EEEEEECCchhhHHH-HHHCC----Cee----CCHHHHHhcCCEEEEcC
Confidence 445679999999 9999999999998887 888877754211111 11111 111 25678999999999984
No 360
>PLN02503 fatty acyl-CoA reductase 2
Probab=96.46 E-value=0.043 Score=57.36 Aligned_cols=117 Identities=15% Similarity=0.071 Sum_probs=71.7
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCC-CCcEEEEEecCC--c--hhHH-HHHhc-----------CC-----CCCeEEEEe
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINP-LVSVLHLYDVVN--T--PGVT-ADISH-----------MD-----TGAVVRGFL 99 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~-~~~ei~L~D~~~--~--~g~~-~dl~~-----------~~-----~~~~v~~~~ 99 (354)
.++|.|+||+||+|..++..|+... -..+|+++.+.. . .... .++.+ .. ...++..+.
T Consensus 119 ~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v~ 198 (605)
T PLN02503 119 GKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPVV 198 (605)
T ss_pred CCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEEE
Confidence 4799999999999999999888754 355788887754 1 1111 11111 00 011233221
Q ss_pred CC----------CcHHhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEec
Q 018512 100 GQ----------PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLIS 159 (354)
Q Consensus 100 ~~----------~d~~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~t 159 (354)
+. .+++...++.|+||++|+... ...........|+....++++.+.+.. .+.+|.+.|
T Consensus 199 GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~-f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vST 268 (605)
T PLN02503 199 GNVCESNLGLEPDLADEIAKEVDVIINSAANTT-FDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVST 268 (605)
T ss_pred eeCCCcccCCCHHHHHHHHhcCCEEEECccccc-cccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccC
Confidence 11 122334478999999987653 233455667889999999999988764 344444444
No 361
>PTZ00431 pyrroline carboxylate reductase; Provisional
Probab=96.42 E-value=0.016 Score=54.17 Aligned_cols=61 Identities=13% Similarity=0.219 Sum_probs=43.7
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCC--cEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLV--SVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 118 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~--~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a 118 (354)
.|||+|||+ |.+|++++..|...+.. .+++.+|+++.. + . ... ..+..++++++|+||++.
T Consensus 3 ~mkI~iIG~-G~mG~ai~~~l~~~~~~~~~~i~~~~~~~~~-----~---~----~~~---~~~~~~~~~~~D~Vilav 65 (260)
T PTZ00431 3 NIRVGFIGL-GKMGSALAYGIENSNIIGKENIYYHTPSKKN-----T---P----FVY---LQSNEELAKTCDIIVLAV 65 (260)
T ss_pred CCEEEEECc-cHHHHHHHHHHHhCCCCCcceEEEECCChhc-----C---C----eEE---eCChHHHHHhCCEEEEEe
Confidence 479999999 99999999999887632 358888876421 0 0 111 123456788999999983
No 362
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.42 E-value=0.02 Score=54.59 Aligned_cols=79 Identities=20% Similarity=0.310 Sum_probs=58.8
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512 39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 118 (354)
Q Consensus 39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a 118 (354)
+-..++|+|||.+|.||..++..|...+. +|.+++... .++++..+.||+||.+.
T Consensus 156 ~l~Gk~V~vIG~s~ivG~PmA~~L~~~ga--tVtv~~~~t-----------------------~~l~e~~~~ADIVIsav 210 (301)
T PRK14194 156 DLTGKHAVVIGRSNIVGKPMAALLLQAHC--SVTVVHSRS-----------------------TDAKALCRQADIVVAAV 210 (301)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCCC--EEEEECCCC-----------------------CCHHHHHhcCCEEEEec
Confidence 34567999999966999999999998887 888887542 14577889999999998
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec-CCC
Q 018512 119 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS-NPV 162 (354)
Q Consensus 119 g~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t-NPv 162 (354)
|.+..-. .++ ..|.++||-++ |++
T Consensus 211 g~~~~v~---~~~-----------------ik~GaiVIDvgin~~ 235 (301)
T PRK14194 211 GRPRLID---ADW-----------------LKPGAVVIDVGINRI 235 (301)
T ss_pred CChhccc---Hhh-----------------ccCCcEEEEeccccc
Confidence 7663211 111 34788888886 654
No 363
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=96.42 E-value=0.036 Score=50.14 Aligned_cols=113 Identities=19% Similarity=0.176 Sum_probs=63.6
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc---hhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh-------
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTGAVVRGFL-GQPQ---LENAL------- 108 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~---~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al------- 108 (354)
.+|.|+|++|.+|+.++..|+..|. .|++.|++.. ......+... ...+..+. +-.+ ..+++
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~--~vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 78 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGY--RVIATYFSGNDCAKDWFEEYGFT--EDQVRLKELDVTDTEECAEALAEIEEEE 78 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCC--EEEEEeCCcHHHHHHHHHHhhcc--CCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 3789999999999999999998886 8999998742 1111111111 11222221 1112 22222
Q ss_pred CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHH----HHHHhhhCCCeEEEEecC
Q 018512 109 TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTL----CEGIAKCCPNATVNLISN 160 (354)
Q Consensus 109 ~~aDvVIi~ag~~~~~---g~~r---~d~~~~n~~~~~~i----~~~i~~~~p~a~viv~tN 160 (354)
...|+||+.+|..... ..+. ...+..|+.....+ .+.+++. +.+.++++|.
T Consensus 79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~iss 139 (245)
T PRK12824 79 GPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQ-GYGRIINISS 139 (245)
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh-CCeEEEEECC
Confidence 3589999998864211 1122 23345666655554 4444443 3456666664
No 364
>PRK07574 formate dehydrogenase; Provisional
Probab=96.41 E-value=0.028 Score=55.62 Aligned_cols=101 Identities=17% Similarity=0.220 Sum_probs=63.0
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512 40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 119 (354)
Q Consensus 40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag 119 (354)
-..++|.|+|. |.+|+.+|..|..-|. +|+.+|+........ .... +.. ..++++.++.||+|++...
T Consensus 190 L~gktVGIvG~-G~IG~~vA~~l~~fG~--~V~~~dr~~~~~~~~--~~~g----~~~---~~~l~ell~~aDvV~l~lP 257 (385)
T PRK07574 190 LEGMTVGIVGA-GRIGLAVLRRLKPFDV--KLHYTDRHRLPEEVE--QELG----LTY---HVSFDSLVSVCDVVTIHCP 257 (385)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHhCCC--EEEEECCCCCchhhH--hhcC----cee---cCCHHHHhhcCCEEEEcCC
Confidence 45679999999 9999999999987676 999999865211111 1111 121 1357889999999999743
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec--CCCCCc
Q 018512 120 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS--NPVNST 165 (354)
Q Consensus 120 ~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t--NPv~~~ 165 (354)
.. ..+-.++- .+.+....+.+++||++ ..+|.-
T Consensus 258 lt-----------~~T~~li~--~~~l~~mk~ga~lIN~aRG~iVDe~ 292 (385)
T PRK07574 258 LH-----------PETEHLFD--ADVLSRMKRGSYLVNTARGKIVDRD 292 (385)
T ss_pred CC-----------HHHHHHhC--HHHHhcCCCCcEEEECCCCchhhHH
Confidence 21 11111221 22333345788999886 444443
No 365
>PRK15059 tartronate semialdehyde reductase; Provisional
Probab=96.41 E-value=0.014 Score=55.49 Aligned_cols=63 Identities=16% Similarity=0.307 Sum_probs=46.1
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 118 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a 118 (354)
|||+|||. |.+|+.++..|+..|+ ++.++|+++. ..++..... .. ..+..++.++||+||++.
T Consensus 1 m~Ig~IGl-G~MG~~ma~~L~~~G~--~v~v~~~~~~---~~~~~~~g~----~~---~~s~~~~~~~advVi~~v 63 (292)
T PRK15059 1 MKLGFIGL-GIMGTPMAINLARAGH--QLHVTTIGPV---ADELLSLGA----VS---VETARQVTEASDIIFIMV 63 (292)
T ss_pred CeEEEEcc-CHHHHHHHHHHHHCCC--eEEEEeCCHh---HHHHHHcCC----ee---cCCHHHHHhcCCEEEEeC
Confidence 58999999 9999999999999997 8889998752 122322211 11 124567789999999974
No 366
>PRK07577 short chain dehydrogenase; Provisional
Probab=96.41 E-value=0.038 Score=49.77 Aligned_cols=35 Identities=20% Similarity=0.134 Sum_probs=31.5
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 78 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~ 78 (354)
.++|.|+||+|.+|..++..|+..|. +|++++++.
T Consensus 3 ~k~vlItG~s~~iG~~ia~~l~~~G~--~v~~~~r~~ 37 (234)
T PRK07577 3 SRTVLVTGATKGIGLALSLRLANLGH--QVIGIARSA 37 (234)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCC--EEEEEeCCc
Confidence 35899999999999999999999887 899999875
No 367
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=96.40 E-value=0.081 Score=47.74 Aligned_cols=113 Identities=17% Similarity=0.173 Sum_probs=61.1
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEec-CCc--hhHHHHHhcCCCCCeEEEEeCCCc---H-------HhhhCC
Q 018512 44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDV-VNT--PGVTADISHMDTGAVVRGFLGQPQ---L-------ENALTG 110 (354)
Q Consensus 44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~-~~~--~g~~~dl~~~~~~~~v~~~~~~~d---~-------~~al~~ 110 (354)
.+.|+||+|.+|..++..|+..|. ++++... +.. .....++............ +-++ + .+.+..
T Consensus 2 ~~lItG~sg~iG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-D~~~~~~~~~~~~~~~~~~~~ 78 (242)
T TIGR01829 2 IALVTGGMGGIGTAICQRLAKDGY--RVAANCGPNEERAEAWLQEQGALGFDFRVVEG-DVSSFESCKAAVAKVEAELGP 78 (242)
T ss_pred EEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHhhCCceEEEEe-cCCCHHHHHHHHHHHHHHcCC
Confidence 578999999999999999999887 7888776 321 1111222211111111111 1122 1 122346
Q ss_pred CcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHH----HHHHHhhhCCCeEEEEecC
Q 018512 111 MDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRT----LCEGIAKCCPNATVNLISN 160 (354)
Q Consensus 111 aDvVIi~ag~~~~~---g~~---r~d~~~~n~~~~~~----i~~~i~~~~p~a~viv~tN 160 (354)
.|.||+++|..... ..+ ..+.+..|+..... +.+.+++. +.+.|+++|.
T Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~iss 137 (242)
T TIGR01829 79 IDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRER-GWGRIINISS 137 (242)
T ss_pred CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEEcc
Confidence 89999999864321 112 22334566665444 44444443 3345666654
No 368
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=96.40 E-value=0.014 Score=48.26 Aligned_cols=71 Identities=24% Similarity=0.309 Sum_probs=44.3
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhH-HHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEc
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGV-TADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP 117 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~-~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ 117 (354)
|||.|+|++|.+|+.++..+...+-..=+..+|.+. ..|. ..++.... ...+.. ++++++.+..+|+||-.
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~-~~~~~v---~~~l~~~~~~~DVvIDf 74 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIG-PLGVPV---TDDLEELLEEADVVIDF 74 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSS-T-SSBE---BS-HHHHTTH-SEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcC-Cccccc---chhHHHhcccCCEEEEc
Confidence 699999999999999999998855332356677765 1111 12222221 122222 35788889999998886
No 369
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=96.39 E-value=0.049 Score=49.54 Aligned_cols=114 Identities=15% Similarity=0.151 Sum_probs=60.9
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEe-cCCc--hhHHHHHhcCCCCCeEEEEeCCCc---HHhh-------hC
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYD-VVNT--PGVTADISHMDTGAVVRGFLGQPQ---LENA-------LT 109 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D-~~~~--~g~~~dl~~~~~~~~v~~~~~~~d---~~~a-------l~ 109 (354)
+.+.|+||+|.+|..++..|+..|. ++++.. .+.. .....++........... .+-.| ..++ +.
T Consensus 4 k~~lVtG~s~giG~~~a~~l~~~G~--~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~D~~~~~~~~~~~~~~~~~~~ 80 (246)
T PRK12938 4 RIAYVTGGMGGIGTSICQRLHKDGF--KVVAGCGPNSPRRVKWLEDQKALGFDFIASE-GNVGDWDSTKAAFDKVKAEVG 80 (246)
T ss_pred CEEEEECCCChHHHHHHHHHHHcCC--EEEEEcCCChHHHHHHHHHHHhcCCcEEEEE-cCCCCHHHHHHHHHHHHHHhC
Confidence 4689999999999999999999987 677754 3321 112223322211111111 11122 2222 34
Q ss_pred CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHH----HHHHHHhhhCCCeEEEEecC
Q 018512 110 GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVR----TLCEGIAKCCPNATVNLISN 160 (354)
Q Consensus 110 ~aDvVIi~ag~~~~~---g~~---r~d~~~~n~~~~~----~i~~~i~~~~p~a~viv~tN 160 (354)
..|+||+++|..... ..+ ....+..|+.... .+.+.+.+. ..+.|+++|.
T Consensus 81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~isS 140 (246)
T PRK12938 81 EIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVER-GWGRIINISS 140 (246)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCeEEEEEec
Confidence 689999999875321 112 2234556665544 444444433 2345666553
No 370
>PRK07578 short chain dehydrogenase; Provisional
Probab=96.39 E-value=0.052 Score=47.90 Aligned_cols=101 Identities=19% Similarity=0.179 Sum_probs=58.5
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHh---hhCCCcEEEEcCC
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLEN---ALTGMDLVIIPAG 119 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~---al~~aDvVIi~ag 119 (354)
|++.|+||+|.+|..++..|... . +|++.+++.. ....|+.+. .++++ .+...|+||..+|
T Consensus 1 ~~vlItGas~giG~~la~~l~~~-~--~vi~~~r~~~-~~~~D~~~~------------~~~~~~~~~~~~id~lv~~ag 64 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR-H--EVITAGRSSG-DVQVDITDP------------ASIRALFEKVGKVDAVVSAAG 64 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc-C--cEEEEecCCC-ceEecCCCh------------HHHHHHHHhcCCCCEEEECCC
Confidence 58999999999999999999877 3 8999987541 011122211 11122 2347899999998
Q ss_pred CCCCC---CCCHHH---HHHHHHHHHHHHHHHHhhhC-CCeEEEEec
Q 018512 120 VPRKP---GMTRDD---LFNINAGIVRTLCEGIAKCC-PNATVNLIS 159 (354)
Q Consensus 120 ~~~~~---g~~r~d---~~~~n~~~~~~i~~~i~~~~-p~a~viv~t 159 (354)
..... ..+..+ .+..|+.....+.+.+.++- +.+.++++|
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 111 (199)
T PRK07578 65 KVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTS 111 (199)
T ss_pred CCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEc
Confidence 64211 122222 23455555455555444332 345555554
No 371
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.39 E-value=0.039 Score=55.47 Aligned_cols=118 Identities=20% Similarity=0.254 Sum_probs=68.8
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEE-EeCCCcHHhh-------hCCCc
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENA-------LTGMD 112 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~~~d~~~a-------l~~aD 112 (354)
+..++.|+||+|.+|..++..|+..|. +++++|.........++........+.. +....+.++. +...|
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga--~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id 286 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGA--HVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLD 286 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC--EEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCC
Confidence 346899999999999999999998887 8999998542222222221110011111 1111111111 23689
Q ss_pred EEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecC
Q 018512 113 LVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISN 160 (354)
Q Consensus 113 vVIi~ag~~~~~---g~~---r~d~~~~n~~~~~~i~~~i~~~---~p~a~viv~tN 160 (354)
+||+++|..... .++ ....+.-|+.....+.+.+... .+.+.|+++|.
T Consensus 287 ~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS 343 (450)
T PRK08261 287 IVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSS 343 (450)
T ss_pred EEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECC
Confidence 999999865321 122 2334567777777777777652 24466776663
No 372
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=96.35 E-value=0.035 Score=50.37 Aligned_cols=38 Identities=32% Similarity=0.379 Sum_probs=32.6
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512 39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 78 (354)
Q Consensus 39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~ 78 (354)
+-+..||+|+|+ |.+|+.++..|+..|.. ++.++|.+.
T Consensus 25 ~L~~~~V~ViG~-GglGs~ia~~La~~Gvg-~i~lvD~D~ 62 (212)
T PRK08644 25 KLKKAKVGIAGA-GGLGSNIAVALARSGVG-NLKLVDFDV 62 (212)
T ss_pred HHhCCCEEEECc-CHHHHHHHHHHHHcCCC-eEEEEeCCE
Confidence 334568999999 99999999999998874 899999983
No 373
>PLN02712 arogenate dehydrogenase
Probab=96.35 E-value=0.026 Score=59.79 Aligned_cols=67 Identities=18% Similarity=0.194 Sum_probs=46.8
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhh-CCCcEEEEc
Q 018512 39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENAL-TGMDLVIIP 117 (354)
Q Consensus 39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al-~~aDvVIi~ 117 (354)
..+++||+|||. |.+|..++..|...|. +|+.+|++.....+. +.. +... .+..+.+ ++||+||++
T Consensus 49 ~~~~~kIgIIG~-G~mG~slA~~L~~~G~--~V~~~dr~~~~~~A~---~~G----v~~~---~d~~e~~~~~aDvViLa 115 (667)
T PLN02712 49 NTTQLKIAIIGF-GNYGQFLAKTLISQGH--TVLAHSRSDHSLAAR---SLG----VSFF---LDPHDLCERHPDVILLC 115 (667)
T ss_pred cCCCCEEEEEcc-CHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHH---HcC----CEEe---CCHHHHhhcCCCEEEEc
Confidence 566789999998 9999999999998886 899999874221111 111 1221 3445544 579999998
Q ss_pred C
Q 018512 118 A 118 (354)
Q Consensus 118 a 118 (354)
.
T Consensus 116 v 116 (667)
T PLN02712 116 T 116 (667)
T ss_pred C
Confidence 4
No 374
>cd00762 NAD_bind_malic_enz NAD(P) binding domain of malic enzyme. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glut
Probab=96.31 E-value=0.026 Score=52.42 Aligned_cols=123 Identities=17% Similarity=0.186 Sum_probs=80.4
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCC----C-----CcEEEEEecCC--chh------HHHHHhcCCCCCeEEEEeCCCc
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINP----L-----VSVLHLYDVVN--TPG------VTADISHMDTGAVVRGFLGQPQ 103 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~----~-----~~ei~L~D~~~--~~g------~~~dl~~~~~~~~v~~~~~~~d 103 (354)
+..||+|.|| |..|..++.+|...+ + ...++++|... ..+ ....+.+.. .. -. ...+
T Consensus 24 ~d~riv~~GA-GsAg~gia~ll~~~~~~~Gls~e~A~~~i~~vD~~Gll~~~r~~l~~~~~~~~~~~-~~-~~---~~~~ 97 (254)
T cd00762 24 SEHKVLFNGA-GAAALGIANLIVXLXVKEGISKEEACKRIWXVDRKGLLVKNRKETCPNEYHLARFA-NP-ER---ESGD 97 (254)
T ss_pred hhcEEEEECc-CHHHHHHHHHHHHHHHhcCCCHHHHhccEEEECCCCeEeCCCCccCHHHHHHHHHc-Cc-cc---ccCC
Confidence 3469999999 999999998886533 2 14899999875 111 111111111 11 11 1257
Q ss_pred HHhhhC--CCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCC--CchHHHHHHHHHhCCC
Q 018512 104 LENALT--GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN--STVPIAAEVFKKAGTY 179 (354)
Q Consensus 104 ~~~al~--~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~--~~~~~~~~~~~~~~~~ 179 (354)
+.++++ ++|++|=+.+.+. -+.+++.+.|.+++++.+|+-.|||.. -.++ +-.++.+
T Consensus 98 L~eav~~~kptvlIG~S~~~g--------------~ft~evv~~Ma~~~~~PIIFaLSNPt~~aE~tp---e~a~~~t-- 158 (254)
T cd00762 98 LEDAVEAAKPDFLIGVSRVGG--------------AFTPEVIRAXAEINERPVIFALSNPTSKAECTA---EEAYTAT-- 158 (254)
T ss_pred HHHHHHhhCCCEEEEeCCCCC--------------CCCHHHHHHHhhcCCCCEEEECCCcCCccccCH---HHHHhhc--
Confidence 899999 9999998765442 145678889999999999999999987 5543 2233433
Q ss_pred CCCCEEEec
Q 018512 180 DPKKLLGVT 188 (354)
Q Consensus 180 p~~kviG~t 188 (354)
+.+.+++..
T Consensus 159 ~G~ai~AtG 167 (254)
T cd00762 159 EGRAIFASG 167 (254)
T ss_pred CCCEEEEEC
Confidence 125678873
No 375
>COG0345 ProC Pyrroline-5-carboxylate reductase [Amino acid transport and metabolism]
Probab=96.31 E-value=0.024 Score=53.15 Aligned_cols=93 Identities=16% Similarity=0.232 Sum_probs=61.2
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCC-C-CcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINP-L-VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 119 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~-~-~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag 119 (354)
++||++||+ |++|++++..|+..+ + ..+|+..|+++.+.. ++.... .. . . +++..++...+|+||++.
T Consensus 1 ~~~IgfIG~-G~Mg~Ai~~gl~~~g~~~~~~I~v~~~~~e~~~--~l~~~~-g~-~-~---~~~~~~~~~~advv~Lav- 70 (266)
T COG0345 1 MMKIGFIGA-GNMGEAILSGLLKSGALPPEEIIVTNRSEEKRA--ALAAEY-GV-V-T---TTDNQEAVEEADVVFLAV- 70 (266)
T ss_pred CceEEEEcc-CHHHHHHHHHHHhcCCCCcceEEEeCCCHHHHH--HHHHHc-CC-c-c---cCcHHHHHhhCCEEEEEe-
Confidence 479999999 999999999999888 2 358888888652211 233211 11 1 1 245568889999999985
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512 120 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 159 (354)
Q Consensus 120 ~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t 159 (354)
|| ..+.++++.++...++.+||-+.
T Consensus 71 ---KP------------q~~~~vl~~l~~~~~~~lvISia 95 (266)
T COG0345 71 ---KP------------QDLEEVLSKLKPLTKDKLVISIA 95 (266)
T ss_pred ---Ch------------HhHHHHHHHhhcccCCCEEEEEe
Confidence 22 24566777777644565554443
No 376
>PRK06483 dihydromonapterin reductase; Provisional
Probab=96.31 E-value=0.082 Score=47.82 Aligned_cols=34 Identities=21% Similarity=0.134 Sum_probs=30.8
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 78 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~ 78 (354)
+++.|+||+|.+|..++..|+..|. +|++.|+++
T Consensus 3 k~vlItGas~gIG~~ia~~l~~~G~--~V~~~~r~~ 36 (236)
T PRK06483 3 APILITGAGQRIGLALAWHLLAQGQ--PVIVSYRTH 36 (236)
T ss_pred ceEEEECCCChHHHHHHHHHHHCCC--eEEEEeCCc
Confidence 4799999999999999999999887 899999875
No 377
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=96.28 E-value=0.041 Score=46.30 Aligned_cols=33 Identities=24% Similarity=0.508 Sum_probs=29.8
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512 44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 78 (354)
Q Consensus 44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~ 78 (354)
||+|+|+ |.+|+.++..|+..|. .++.++|.+.
T Consensus 1 ~VliiG~-GglGs~ia~~L~~~Gv-~~i~ivD~d~ 33 (143)
T cd01483 1 RVLLVGL-GGLGSEIALNLARSGV-GKITLIDFDT 33 (143)
T ss_pred CEEEECC-CHHHHHHHHHHHHCCC-CEEEEEcCCC
Confidence 6899999 9999999999999987 4899999874
No 378
>PRK06940 short chain dehydrogenase; Provisional
Probab=96.26 E-value=0.047 Score=51.09 Aligned_cols=110 Identities=17% Similarity=0.199 Sum_probs=61.3
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh------CCC
Q 018512 44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENAL------TGM 111 (354)
Q Consensus 44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al------~~a 111 (354)
.+.|+|| |.+|..++..|. .|. +|++.|++.. .....++.... ..+..+. +-.| .+.++ ...
T Consensus 4 ~~lItGa-~gIG~~la~~l~-~G~--~Vv~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~i~~~~~~~~~~g~i 77 (275)
T PRK06940 4 VVVVIGA-GGIGQAIARRVG-AGK--KVLLADYNEENLEAAAKTLREAG--FDVSTQEVDVSSRESVKALAATAQTLGPV 77 (275)
T ss_pred EEEEECC-ChHHHHHHHHHh-CCC--EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEEeecCCHHHHHHHHHHHHhcCCC
Confidence 4566676 899999999985 665 8999998752 22223333221 1221110 1112 22222 468
Q ss_pred cEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecC
Q 018512 112 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISN 160 (354)
Q Consensus 112 DvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tN 160 (354)
|++|+.||.... .......+..|+.....+.+.+.+.- +++.+++++.
T Consensus 78 d~li~nAG~~~~-~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS 126 (275)
T PRK06940 78 TGLVHTAGVSPS-QASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIAS 126 (275)
T ss_pred CEEEECCCcCCc-hhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEe
Confidence 999999987521 23345566777766666666555432 2343444443
No 379
>PRK06476 pyrroline-5-carboxylate reductase; Reviewed
Probab=96.25 E-value=0.022 Score=52.95 Aligned_cols=68 Identities=18% Similarity=0.228 Sum_probs=45.4
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCC-CcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPL-VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 118 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~-~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a 118 (354)
|||+|||+ |.+|++++..|...++ ...+.++|++... ...+.... +.+... .+..++++++|+||++.
T Consensus 1 m~IgiIG~-G~mG~aia~~L~~~g~~~~~i~v~~r~~~~--~~~l~~~~--~~~~~~---~~~~~~~~~aDvVilav 69 (258)
T PRK06476 1 MKIGFIGT-GAITEAMVTGLLTSPADVSEIIVSPRNAQI--AARLAERF--PKVRIA---KDNQAVVDRSDVVFLAV 69 (258)
T ss_pred CeEEEECc-CHHHHHHHHHHHhCCCChheEEEECCCHHH--HHHHHHHc--CCceEe---CCHHHHHHhCCEEEEEe
Confidence 58999998 9999999999988774 3456788875422 12222211 112221 34567789999999985
No 380
>PLN03139 formate dehydrogenase; Provisional
Probab=96.24 E-value=0.037 Score=54.72 Aligned_cols=101 Identities=21% Similarity=0.206 Sum_probs=63.1
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512 39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 118 (354)
Q Consensus 39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a 118 (354)
.-..++|+|+|. |.+|+.++..|..-|. +|+.+|......... .+.. +.. ..++++.+++||+|++..
T Consensus 196 ~L~gktVGIVG~-G~IG~~vA~~L~afG~--~V~~~d~~~~~~~~~--~~~g----~~~---~~~l~ell~~sDvV~l~l 263 (386)
T PLN03139 196 DLEGKTVGTVGA-GRIGRLLLQRLKPFNC--NLLYHDRLKMDPELE--KETG----AKF---EEDLDAMLPKCDVVVINT 263 (386)
T ss_pred CCCCCEEEEEee-cHHHHHHHHHHHHCCC--EEEEECCCCcchhhH--hhcC----cee---cCCHHHHHhhCCEEEEeC
Confidence 345679999999 9999999999987666 899999864211111 1111 111 236788999999999974
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec--CCCCC
Q 018512 119 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS--NPVNS 164 (354)
Q Consensus 119 g~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t--NPv~~ 164 (354)
... ..+-.++- .+.+....|.+++||.+ ..+|.
T Consensus 264 Plt-----------~~T~~li~--~~~l~~mk~ga~lIN~aRG~iVDe 298 (386)
T PLN03139 264 PLT-----------EKTRGMFN--KERIAKMKKGVLIVNNARGAIMDT 298 (386)
T ss_pred CCC-----------HHHHHHhC--HHHHhhCCCCeEEEECCCCchhhH
Confidence 211 11111221 23444445789999886 44443
No 381
>COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only]
Probab=96.24 E-value=0.051 Score=49.35 Aligned_cols=95 Identities=21% Similarity=0.284 Sum_probs=65.0
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCC-CCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCCC
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINP-LVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP 121 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~-~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~~ 121 (354)
|||.|||. |.+|..+...+.... .+.-+.+||.+..+. ..+...-... ..+++.+.+.+.|+||.+|+
T Consensus 1 l~vgiVGc-GaIG~~l~e~v~~~~~~~e~v~v~D~~~ek~--~~~~~~~~~~------~~s~ide~~~~~DlvVEaAS-- 69 (255)
T COG1712 1 LKVGIVGC-GAIGKFLLELVRDGRVDFELVAVYDRDEEKA--KELEASVGRR------CVSDIDELIAEVDLVVEAAS-- 69 (255)
T ss_pred CeEEEEec-cHHHHHHHHHHhcCCcceeEEEEecCCHHHH--HHHHhhcCCC------ccccHHHHhhccceeeeeCC--
Confidence 68999998 999999988887653 355688899876322 2222221111 11356677799999999975
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCC
Q 018512 122 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV 162 (354)
Q Consensus 122 ~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv 162 (354)
.+.+++++.++-+.+.|.+|+-++-=+
T Consensus 70 --------------~~Av~e~~~~~L~~g~d~iV~SVGALa 96 (255)
T COG1712 70 --------------PEAVREYVPKILKAGIDVIVMSVGALA 96 (255)
T ss_pred --------------HHHHHHHhHHHHhcCCCEEEEechhcc
Confidence 246788888888888888666554333
No 382
>PRK06953 short chain dehydrogenase; Provisional
Probab=96.23 E-value=0.076 Score=47.69 Aligned_cols=113 Identities=17% Similarity=0.179 Sum_probs=64.8
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEE-EeCCCcHHh---hhC--CCcEEEE
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLEN---ALT--GMDLVII 116 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~~~d~~~---al~--~aDvVIi 116 (354)
+++.|+||+|.+|+.++..|+..|. +|+++|++... ..++..... ..+.. +....++++ .+. ..|+||+
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~--~v~~~~r~~~~--~~~~~~~~~-~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~ 76 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGW--RVIATARDAAA--LAALQALGA-EALALDVADPASVAGLAWKLDGEALDAAVY 76 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCC--EEEEEECCHHH--HHHHHhccc-eEEEecCCCHHHHHHHHHHhcCCCCCEEEE
Confidence 4789999999999999999988887 89999987521 112222111 01111 111112222 133 4899999
Q ss_pred cCCCCCC---C--CCCH---HHHHHHHHHHHHHHHHHHhhhC--CCeEEEEecC
Q 018512 117 PAGVPRK---P--GMTR---DDLFNINAGIVRTLCEGIAKCC--PNATVNLISN 160 (354)
Q Consensus 117 ~ag~~~~---~--g~~r---~d~~~~n~~~~~~i~~~i~~~~--p~a~viv~tN 160 (354)
++|.... . ..+. ...+..|+.....+.+.+.++- ..+.+++++.
T Consensus 77 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS 130 (222)
T PRK06953 77 VAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSS 130 (222)
T ss_pred CCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcC
Confidence 9886521 1 1122 3345677777667766665432 2344555543
No 383
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=96.23 E-value=0.022 Score=54.13 Aligned_cols=97 Identities=21% Similarity=0.215 Sum_probs=61.7
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCC
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV 120 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~ 120 (354)
...+|+|+|+ |.+|..++..|...|. +|.++|++.... ........ ..+ ...++.+.++++|+||.+...
T Consensus 150 ~gk~v~IiG~-G~iG~avA~~L~~~G~--~V~v~~R~~~~~--~~~~~~g~----~~~-~~~~l~~~l~~aDiVint~P~ 219 (287)
T TIGR02853 150 HGSNVMVLGF-GRTGMTIARTFSALGA--RVFVGARSSADL--ARITEMGL----IPF-PLNKLEEKVAEIDIVINTIPA 219 (287)
T ss_pred CCCEEEEEcC-hHHHHHHHHHHHHCCC--EEEEEeCCHHHH--HHHHHCCC----eee-cHHHHHHHhccCCEEEECCCh
Confidence 4469999999 9999999999988886 899999875211 11111111 111 123567788999999998521
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEe-cCCCCCc
Q 018512 121 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI-SNPVNST 165 (354)
Q Consensus 121 ~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~-tNPv~~~ 165 (354)
. ++ + .+ .+....+++++|.+ ++|-..-
T Consensus 220 ~---------ii--~----~~---~l~~~k~~aliIDlas~Pg~td 247 (287)
T TIGR02853 220 L---------VL--T----AD---VLSKLPKHAVIIDLASKPGGTD 247 (287)
T ss_pred H---------Hh--C----HH---HHhcCCCCeEEEEeCcCCCCCC
Confidence 1 01 1 12 22333467888877 5886654
No 384
>PRK06484 short chain dehydrogenase; Validated
Probab=96.22 E-value=0.058 Score=55.10 Aligned_cols=147 Identities=16% Similarity=0.178 Sum_probs=81.6
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEE-EeCCCcHHhh-------hCCC
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRG-FLGQPQLENA-------LTGM 111 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~-~~~~~d~~~a-------l~~a 111 (354)
.+++.|+||+|.+|..++..|+..|. .|++.|+++. +....++.. . ...+.. +....+.++. +...
T Consensus 269 ~k~~lItGas~gIG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~-~-~~~~~~D~~~~~~~~~~~~~~~~~~g~i 344 (520)
T PRK06484 269 PRVVAITGGARGIGRAVADRFAAAGD--RLLIIDRDAEGAKKLAEALGD-E-HLSVQADITDEAAVESAFAQIQARWGRL 344 (520)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhCC-c-eeEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 46899999999999999999999997 8999998752 111221211 0 001111 1111122222 2457
Q ss_pred cEEEEcCCCCCC--C--CCC---HHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHhCCCCCCC
Q 018512 112 DLVIIPAGVPRK--P--GMT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKK 183 (354)
Q Consensus 112 DvVIi~ag~~~~--~--g~~---r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~k 183 (354)
|++|+.||.... + ..+ ....+.-|+.....+.+.+..+- ..+.|+++|...... +.|..-
T Consensus 345 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------------~~~~~~ 412 (520)
T PRK06484 345 DVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLL------------ALPPRN 412 (520)
T ss_pred CEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcC------------CCCCCc
Confidence 999999986421 1 122 23345566666555555544432 346777776533222 233333
Q ss_pred EEEeccchHHHHHHHHHHHhC
Q 018512 184 LLGVTMLDVVRANTFVAEVLG 204 (354)
Q Consensus 184 viG~t~ld~~r~~~~la~~l~ 204 (354)
.++.+......+.+.+++.++
T Consensus 413 ~Y~asKaal~~l~~~la~e~~ 433 (520)
T PRK06484 413 AYCASKAAVTMLSRSLACEWA 433 (520)
T ss_pred hhHHHHHHHHHHHHHHHHHhh
Confidence 455544444456667776653
No 385
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.21 E-value=0.093 Score=48.85 Aligned_cols=158 Identities=13% Similarity=0.201 Sum_probs=80.6
Q ss_pred CCeEEEEcCCC--chHHHHHHHHHhCCCCcEEEEEecCC-chhHHHHHhcCCCCCe-EEE-EeCCCcHH-------hhhC
Q 018512 42 GFKVAILGAAG--GIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAV-VRG-FLGQPQLE-------NALT 109 (354)
Q Consensus 42 ~~kI~IiGa~G--~vG~~~a~~l~~~~~~~ei~L~D~~~-~~g~~~dl~~~~~~~~-v~~-~~~~~d~~-------~al~ 109 (354)
.+.+.|+||++ .+|..++..|+..|. .|++.|++. ......++........ +.. +....+.+ +.+.
T Consensus 6 ~k~~lITGas~~~GIG~aia~~la~~G~--~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 83 (262)
T PRK07984 6 GKRILVTGVASKLSIAYGIAQAMHREGA--ELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWP 83 (262)
T ss_pred CCEEEEeCCCCCccHHHHHHHHHHHCCC--EEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcC
Confidence 34789999953 699999999999997 789988764 2223333432211111 110 11111121 1233
Q ss_pred CCcEEEEcCCCCCCC--------CCCHHH---HHHHHHHHHHHHHHHHhhh-CCCeEEEEecCCCCCchHHHHHHHHHhC
Q 018512 110 GMDLVIIPAGVPRKP--------GMTRDD---LFNINAGIVRTLCEGIAKC-CPNATVNLISNPVNSTVPIAAEVFKKAG 177 (354)
Q Consensus 110 ~aDvVIi~ag~~~~~--------g~~r~d---~~~~n~~~~~~i~~~i~~~-~p~a~viv~tNPv~~~~~~~~~~~~~~~ 177 (354)
..|++|+.||..... ..+..+ .+.-|+.....+.+.+... .+.+.|+++|.-....
T Consensus 84 ~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~------------ 151 (262)
T PRK07984 84 KFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER------------ 151 (262)
T ss_pred CCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCC------------
Confidence 579999999864211 112222 2344554333333333222 2346677766422111
Q ss_pred CCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512 178 TYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV 215 (354)
Q Consensus 178 ~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~ 215 (354)
+.|..-.++.+...-..+.+.+|..++ +..|++..+
T Consensus 152 ~~~~~~~Y~asKaal~~l~~~la~el~--~~gIrVn~i 187 (262)
T PRK07984 152 AIPNYNVMGLAKASLEANVRYMANAMG--PEGVRVNAI 187 (262)
T ss_pred CCCCcchhHHHHHHHHHHHHHHHHHhc--ccCcEEeee
Confidence 122223455554445567777777763 444544433
No 386
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=96.21 E-value=0.075 Score=48.66 Aligned_cols=100 Identities=22% Similarity=0.303 Sum_probs=62.6
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCC-CcEEEEEecCC----chh-----HHHHHhcCCCCCeEEEEeCCCcHHhhhC
Q 018512 40 AAGFKVAILGAAGGIGQPLAMLMKINPL-VSVLHLYDVVN----TPG-----VTADISHMDTGAVVRGFLGQPQLENALT 109 (354)
Q Consensus 40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~-~~ei~L~D~~~----~~g-----~~~dl~~~~~~~~v~~~~~~~d~~~al~ 109 (354)
-+..||+|+|| |..|..++..|...|. .++|.++|++. .+. ...++.+...... . ..++.++++
T Consensus 23 l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~---~--~~~l~~~l~ 96 (226)
T cd05311 23 IEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK---T--GGTLKEALK 96 (226)
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc---c--cCCHHHHHh
Confidence 34469999999 9999999999988775 23799999983 111 1122222110011 1 125678899
Q ss_pred CCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCC
Q 018512 110 GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN 163 (354)
Q Consensus 110 ~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~ 163 (354)
++|+||.+.+ +|+-. .+..+.| +++.+|+..+||..
T Consensus 97 ~~dvlIgaT~----~G~~~-----------~~~l~~m---~~~~ivf~lsnP~~ 132 (226)
T cd05311 97 GADVFIGVSR----PGVVK-----------KEMIKKM---AKDPIVFALANPVP 132 (226)
T ss_pred cCCEEEeCCC----CCCCC-----------HHHHHhh---CCCCEEEEeCCCCC
Confidence 9999999754 23311 1233333 36777777889974
No 387
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=96.20 E-value=0.033 Score=54.12 Aligned_cols=38 Identities=24% Similarity=0.187 Sum_probs=32.8
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512 39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 78 (354)
Q Consensus 39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~ 78 (354)
+.+..||+|+|+ |.+|+.++..|+..|.. +|.|+|.+.
T Consensus 21 ~L~~~~VlIiG~-GglGs~va~~La~aGvg-~i~lvD~D~ 58 (338)
T PRK12475 21 KIREKHVLIVGA-GALGAANAEALVRAGIG-KLTIADRDY 58 (338)
T ss_pred hhcCCcEEEECC-CHHHHHHHHHHHHcCCC-EEEEEcCCc
Confidence 344568999999 99999999999999864 899999974
No 388
>PRK08605 D-lactate dehydrogenase; Validated
Probab=96.19 E-value=0.023 Score=55.05 Aligned_cols=64 Identities=27% Similarity=0.388 Sum_probs=45.5
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 118 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a 118 (354)
..++|+|||. |.+|+.+|..|+. +..-+|+.+|...... .... +. ...++++++++||+|+++.
T Consensus 145 ~g~~VgIIG~-G~IG~~vA~~L~~-~~g~~V~~~d~~~~~~----~~~~-----~~---~~~~l~ell~~aDvIvl~l 208 (332)
T PRK08605 145 KDLKVAVIGT-GRIGLAVAKIFAK-GYGSDVVAYDPFPNAK----AATY-----VD---YKDTIEEAVEGADIVTLHM 208 (332)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHh-cCCCEEEEECCCccHh----HHhh-----cc---ccCCHHHHHHhCCEEEEeC
Confidence 4579999999 9999999999853 3333899999865221 1110 11 1236788999999999985
No 389
>KOG2305 consensus 3-hydroxyacyl-CoA dehydrogenase [Lipid transport and metabolism]
Probab=96.18 E-value=0.0058 Score=55.41 Aligned_cols=105 Identities=19% Similarity=0.264 Sum_probs=67.3
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC------chhHHH---HHhcCCC-CC------eEEEEeCCCcHHh
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN------TPGVTA---DISHMDT-GA------VVRGFLGQPQLEN 106 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~------~~g~~~---dl~~~~~-~~------~v~~~~~~~d~~~ 106 (354)
-||+|+|. |.+|+..|..++..|. +|.|||+.+ ++.... +|+.... .. .+..+++++++.|
T Consensus 4 ~ki~ivgS-gl~g~~WAmlFAs~Gy--qVqlYDI~e~Ql~~ALen~~Kel~~Lee~g~lrGnlsa~eqla~is~t~~l~E 80 (313)
T KOG2305|consen 4 GKIAIVGS-GLVGSSWAMLFASSGY--QVQLYDILEKQLQTALENVEKELRKLEEHGLLRGNLSADEQLALISGTTSLNE 80 (313)
T ss_pred cceeEeec-ccccchHHHHHhccCc--eEEEeeccHHHHHHHHHHHHHHHHHHHHhhhhccCccHHHHHHHHhCCccHHH
Confidence 48999998 9999999999999999 999999976 122222 3332211 11 1112345677888
Q ss_pred hhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCch
Q 018512 107 ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTV 166 (354)
Q Consensus 107 al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~ 166 (354)
..++|=+|-.+ ..+.+...+++.+++++.. |.. |+.|....++.
T Consensus 81 ~vk~Ai~iQEc--------------vpE~L~lkk~ly~qlD~i~d~~t--IlaSSTSt~mp 125 (313)
T KOG2305|consen 81 LVKGAIHIQEC--------------VPEDLNLKKQLYKQLDEIADPTT--ILASSTSTFMP 125 (313)
T ss_pred HHhhhhhHHhh--------------chHhhHHHHHHHHHHHHhcCCce--EEeccccccCh
Confidence 88887444333 2344566777888888776 454 55665554443
No 390
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=96.17 E-value=0.048 Score=47.86 Aligned_cols=95 Identities=24% Similarity=0.319 Sum_probs=59.3
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512 39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 118 (354)
Q Consensus 39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a 118 (354)
.-...+|.|+|. |.+|+.+|..+..-|. +|+.+|+...... ...+.. +.. .++++.++.||+|++..
T Consensus 33 ~l~g~tvgIiG~-G~IG~~vA~~l~~fG~--~V~~~d~~~~~~~--~~~~~~----~~~----~~l~ell~~aDiv~~~~ 99 (178)
T PF02826_consen 33 ELRGKTVGIIGY-GRIGRAVARRLKAFGM--RVIGYDRSPKPEE--GADEFG----VEY----VSLDELLAQADIVSLHL 99 (178)
T ss_dssp -STTSEEEEEST-SHHHHHHHHHHHHTT---EEEEEESSCHHHH--HHHHTT----EEE----SSHHHHHHH-SEEEE-S
T ss_pred ccCCCEEEEEEE-cCCcCeEeeeeecCCc--eeEEecccCChhh--hccccc----cee----eehhhhcchhhhhhhhh
Confidence 445679999999 9999999999997777 9999999763221 112211 111 36788999999999975
Q ss_pred CC-CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecC
Q 018512 119 GV-PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN 160 (354)
Q Consensus 119 g~-~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tN 160 (354)
.. +...++-.. + .+.+..+++++||++-
T Consensus 100 plt~~T~~li~~-----------~---~l~~mk~ga~lvN~aR 128 (178)
T PF02826_consen 100 PLTPETRGLINA-----------E---FLAKMKPGAVLVNVAR 128 (178)
T ss_dssp SSSTTTTTSBSH-----------H---HHHTSTTTEEEEESSS
T ss_pred ccccccceeeee-----------e---eeeccccceEEEeccc
Confidence 32 222222111 1 1223347889999873
No 391
>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]
Probab=96.16 E-value=0.025 Score=53.50 Aligned_cols=69 Identities=25% Similarity=0.273 Sum_probs=42.9
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCc-HHhhhCCCcEEEEcC
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ-LENALTGMDLVIIPA 118 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d-~~~al~~aDvVIi~a 118 (354)
.++|+|+|. |.+|..++..|...++ .+..++.+...+....-..... ... .+.+ ..++.++||+||++.
T Consensus 3 ~~~v~IvG~-GliG~s~a~~l~~~g~--~v~i~g~d~~~~~~~~a~~lgv----~d~-~~~~~~~~~~~~aD~Vivav 72 (279)
T COG0287 3 SMKVGIVGL-GLMGGSLARALKEAGL--VVRIIGRDRSAATLKAALELGV----IDE-LTVAGLAEAAAEADLVIVAV 72 (279)
T ss_pred CcEEEEECC-chHHHHHHHHHHHcCC--eEEEEeecCcHHHHHHHhhcCc----ccc-cccchhhhhcccCCEEEEec
Confidence 479999998 9999999999999999 5555555542211110111110 000 0112 257788999999984
No 392
>PRK06125 short chain dehydrogenase; Provisional
Probab=96.16 E-value=0.25 Score=45.32 Aligned_cols=114 Identities=19% Similarity=0.180 Sum_probs=64.4
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEE-eCCCcH---H---hhhCCCc
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF-LGQPQL---E---NALTGMD 112 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~-~~~~d~---~---~al~~aD 112 (354)
.+++.|+|++|.+|..++..|+..|. +|++.|++. ......++.... ...+..+ .+-++. . +.+...|
T Consensus 7 ~k~vlItG~~~giG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~g~id 83 (259)
T PRK06125 7 GKRVLITGASKGIGAAAAEAFAAEGC--HLHLVARDADALEALAADLRAAH-GVDVAVHALDLSSPEAREQLAAEAGDID 83 (259)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhhc-CCceEEEEecCCCHHHHHHHHHHhCCCC
Confidence 45899999999999999999999887 899999875 222223333211 1112111 111121 1 2346799
Q ss_pred EEEEcCCCCCCC---CCCH---HHHHHHHHHH----HHHHHHHHhhhCCCeEEEEec
Q 018512 113 LVIIPAGVPRKP---GMTR---DDLFNINAGI----VRTLCEGIAKCCPNATVNLIS 159 (354)
Q Consensus 113 vVIi~ag~~~~~---g~~r---~d~~~~n~~~----~~~i~~~i~~~~p~a~viv~t 159 (354)
++|+++|..... ..+. ...+..|+.. .+.+.+.+++.. .+.|+++|
T Consensus 84 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~is 139 (259)
T PRK06125 84 ILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARG-SGVIVNVI 139 (259)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEec
Confidence 999998864211 1122 2234455543 444445554432 34556554
No 393
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=96.14 E-value=0.029 Score=53.56 Aligned_cols=68 Identities=19% Similarity=0.216 Sum_probs=48.3
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc-hhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512 40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 118 (354)
Q Consensus 40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~-~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a 118 (354)
....||+|+|+ |.+|..++..|...|. +|.++|++.. ...+. .... +.. ...++.+.++++|+||.+.
T Consensus 150 l~g~kvlViG~-G~iG~~~a~~L~~~Ga--~V~v~~r~~~~~~~~~---~~G~----~~~-~~~~l~~~l~~aDiVI~t~ 218 (296)
T PRK08306 150 IHGSNVLVLGF-GRTGMTLARTLKALGA--NVTVGARKSAHLARIT---EMGL----SPF-HLSELAEEVGKIDIIFNTI 218 (296)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHH---HcCC----eee-cHHHHHHHhCCCCEEEECC
Confidence 34579999999 9999999999988776 9999999752 22222 1111 111 1235677889999999985
No 394
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.12 E-value=0.055 Score=49.84 Aligned_cols=35 Identities=20% Similarity=0.156 Sum_probs=30.2
Q ss_pred CCeEEEEcCC--CchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512 42 GFKVAILGAA--GGIGQPLAMLMKINPLVSVLHLYDVVN 78 (354)
Q Consensus 42 ~~kI~IiGa~--G~vG~~~a~~l~~~~~~~ei~L~D~~~ 78 (354)
.+.+.|+||+ +.+|..++..|+..|. +|++.+++.
T Consensus 7 ~k~~lItGas~~~gIG~a~a~~la~~G~--~Vi~~~r~~ 43 (252)
T PRK06079 7 GKKIVVMGVANKRSIAWGCAQAIKDQGA--TVIYTYQND 43 (252)
T ss_pred CCEEEEeCCCCCCchHHHHHHHHHHCCC--EEEEecCch
Confidence 4579999997 5899999999999987 899998864
No 395
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=96.12 E-value=0.042 Score=49.41 Aligned_cols=71 Identities=14% Similarity=0.090 Sum_probs=46.4
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 119 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag 119 (354)
+.+||.|||| |.+|...+..|...|. +|++++.+... ...++.+.. .+......-+ ++.+.++|+||.+.+
T Consensus 9 ~~k~vLVIGg-G~va~~ka~~Ll~~ga--~V~VIs~~~~~-~l~~l~~~~---~i~~~~~~~~-~~~l~~adlViaaT~ 79 (202)
T PRK06718 9 SNKRVVIVGG-GKVAGRRAITLLKYGA--HIVVISPELTE-NLVKLVEEG---KIRWKQKEFE-PSDIVDAFLVIAATN 79 (202)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCC--eEEEEcCCCCH-HHHHHHhCC---CEEEEecCCC-hhhcCCceEEEEcCC
Confidence 3459999999 9999999999998886 89999864322 222333221 1222111112 456899999988743
No 396
>KOG2666 consensus UDP-glucose/GDP-mannose dehydrogenase [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=96.10 E-value=0.025 Score=53.65 Aligned_cols=76 Identities=25% Similarity=0.424 Sum_probs=48.2
Q ss_pred CCeEEEEcCCCchHHHHHHHHH-hCCCCcEEEEEecCCch--------------hHHHHHhcCCCCCeEEEEeCCCcHHh
Q 018512 42 GFKVAILGAAGGIGQPLAMLMK-INPLVSVLHLYDVVNTP--------------GVTADISHMDTGAVVRGFLGQPQLEN 106 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~-~~~~~~ei~L~D~~~~~--------------g~~~dl~~~~~~~~v~~~~~~~d~~~ 106 (354)
.+|||-||| |+||.....-++ ..+. .+|.++|++..+ |...-..++. ...+- + ++|.+.
T Consensus 1 ~~kicciga-gyvggptcavia~kcp~-i~vtvvd~s~~ri~~wnsd~lpiyepgldevv~~cr-gknlf-f--stdiek 74 (481)
T KOG2666|consen 1 MVKICCIGA-GYVGGPTCAVIALKCPD-IEVTVVDISVPRINAWNSDKLPIYEPGLDEVVKQCR-GKNLF-F--STDIEK 74 (481)
T ss_pred CceEEEecC-cccCCcchheeeecCCc-eEEEEEecCchHhhcccCCCCcccCCCHHHHHHHhc-CCcee-e--ecchHH
Confidence 369999999 999877654333 3332 399999997611 1111011111 11122 2 468899
Q ss_pred hhCCCcEEEEcCCCCCC
Q 018512 107 ALTGMDLVIIPAGVPRK 123 (354)
Q Consensus 107 al~~aDvVIi~ag~~~~ 123 (354)
+++.||+|+++...|.+
T Consensus 75 ai~eadlvfisvntptk 91 (481)
T KOG2666|consen 75 AIKEADLVFISVNTPTK 91 (481)
T ss_pred HhhhcceEEEEecCCcc
Confidence 99999999998877754
No 397
>PRK14806 bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional
Probab=96.09 E-value=0.035 Score=59.52 Aligned_cols=68 Identities=21% Similarity=0.291 Sum_probs=47.4
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 118 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a 118 (354)
.||+|||+ |.+|..++..+...++..+|..+|+++... ......... .. ...++.++++++|+||++.
T Consensus 4 ~~I~IIG~-G~mG~ala~~l~~~G~~~~V~~~d~~~~~~--~~a~~~g~~--~~---~~~~~~~~~~~aDvVilav 71 (735)
T PRK14806 4 GRVVVIGL-GLIGGSFAKALRERGLAREVVAVDRRAKSL--ELAVSLGVI--DR---GEEDLAEAVSGADVIVLAV 71 (735)
T ss_pred cEEEEEee-CHHHHHHHHHHHhcCCCCEEEEEECChhHH--HHHHHCCCC--Cc---ccCCHHHHhcCCCEEEECC
Confidence 58999998 999999999999888544799999976221 111111110 01 1235677889999999985
No 398
>PRK06484 short chain dehydrogenase; Validated
Probab=96.09 E-value=0.051 Score=55.48 Aligned_cols=35 Identities=26% Similarity=0.208 Sum_probs=31.3
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 78 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~ 78 (354)
.+.+.|+||++.+|..++..|+..|. .|+++|++.
T Consensus 5 ~k~~lITGas~gIG~aia~~l~~~G~--~V~~~~r~~ 39 (520)
T PRK06484 5 SRVVLVTGAAGGIGRAACQRFARAGD--QVVVADRNV 39 (520)
T ss_pred CeEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCH
Confidence 45799999999999999999999987 899999875
No 399
>PRK13304 L-aspartate dehydrogenase; Reviewed
Probab=96.09 E-value=0.037 Score=51.92 Aligned_cols=68 Identities=18% Similarity=0.315 Sum_probs=44.4
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCC-CCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINP-LVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 118 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~-~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a 118 (354)
+|||+|||. |.+|..++..+...+ ...-+.++|.+... ..++.... . ...+ +++++.+.++|+|++++
T Consensus 1 mmrIgIIG~-G~iG~~ia~~l~~~~~~~elv~v~d~~~~~--a~~~a~~~-~--~~~~---~~~~ell~~~DvVvi~a 69 (265)
T PRK13304 1 MLKIGIVGC-GAIASLITKAILSGRINAELYAFYDRNLEK--AENLASKT-G--AKAC---LSIDELVEDVDLVVECA 69 (265)
T ss_pred CCEEEEECc-cHHHHHHHHHHHcCCCCeEEEEEECCCHHH--HHHHHHhc-C--CeeE---CCHHHHhcCCCEEEEcC
Confidence 479999998 999999999887654 22235678886521 12222211 1 1222 35667679999999986
No 400
>TIGR00873 gnd 6-phosphogluconate dehydrogenase, decarboxylating. This model does not specify whether the cofactor is NADP only (EC 1.1.1.44), NAD only, or both. The model does not assign an EC number for that reason.
Probab=96.08 E-value=0.038 Score=56.09 Aligned_cols=97 Identities=12% Similarity=0.161 Sum_probs=57.7
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcC-CCCCeEEEEeCCCcHHhhhCCCcEEEEcCCCCC
Q 018512 44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHM-DTGAVVRGFLGQPQLENALTGMDLVIIPAGVPR 122 (354)
Q Consensus 44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~-~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~~~ 122 (354)
+|+|||. |.+|.++|..|+..|+ +|+++|+++.. +.++... .....+.......++.++++++|+||++....
T Consensus 1 ~IG~IGL-G~MG~~mA~nL~~~G~--~V~v~drt~~~--~~~l~~~~~~g~~~~~~~s~~e~v~~l~~~dvIil~v~~~- 74 (467)
T TIGR00873 1 DIGVIGL-AVMGSNLALNMADHGF--TVSVYNRTPEK--TDEFLAEHAKGKKIVGAYSIEEFVQSLERPRKIMLMVKAG- 74 (467)
T ss_pred CEEEEee-HHHHHHHHHHHHhcCC--eEEEEeCCHHH--HHHHHhhccCCCCceecCCHHHHHhhcCCCCEEEEECCCc-
Confidence 4899999 9999999999999998 99999997622 2223221 00111222211123333456899999874221
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhhh-CCCeEEEEecC
Q 018512 123 KPGMTRDDLFNINAGIVRTLCEGIAKC-CPNATVNLISN 160 (354)
Q Consensus 123 ~~g~~r~d~~~~n~~~~~~i~~~i~~~-~p~a~viv~tN 160 (354)
+.+.++++.+..+ .++.+||-.||
T Consensus 75 --------------~~v~~Vi~~l~~~L~~g~iIID~gn 99 (467)
T TIGR00873 75 --------------APVDAVINQLLPLLEKGDIIIDGGN 99 (467)
T ss_pred --------------HHHHHHHHHHHhhCCCCCEEEECCC
Confidence 1223333444444 36677787776
No 401
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=96.05 E-value=0.0056 Score=60.38 Aligned_cols=75 Identities=21% Similarity=0.212 Sum_probs=44.9
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhc-CCCCCeEEEEeC--CCcHHhhhCCCcEEEEcCCCC
Q 018512 45 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISH-MDTGAVVRGFLG--QPQLENALTGMDLVIIPAGVP 121 (354)
Q Consensus 45 I~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~-~~~~~~v~~~~~--~~d~~~al~~aDvVIi~ag~~ 121 (354)
|.|+|+ |.+|+.++..|+......+|++.|++..+.... ... ............ ..++.+.++++|+||.+++..
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~-~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~ 78 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERL-AEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPF 78 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHH-HT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGG
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHH-HhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCccc
Confidence 789999 999999999999887655899999986221111 111 111111111111 123567889999999998643
No 402
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=96.05 E-value=0.048 Score=53.08 Aligned_cols=37 Identities=22% Similarity=0.226 Sum_probs=32.2
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512 40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 78 (354)
Q Consensus 40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~ 78 (354)
-+..||+|+|+ |.+|+.++..|+..|.. +|.++|.+.
T Consensus 22 L~~~~VlVvG~-GglGs~va~~La~aGvg-~i~lvD~D~ 58 (339)
T PRK07688 22 LREKHVLIIGA-GALGTANAEMLVRAGVG-KVTIVDRDY 58 (339)
T ss_pred hcCCcEEEECC-CHHHHHHHHHHHHcCCC-eEEEEeCCc
Confidence 34458999999 99999999999999874 899999974
No 403
>PRK00048 dihydrodipicolinate reductase; Provisional
Probab=96.04 E-value=0.25 Score=46.06 Aligned_cols=143 Identities=20% Similarity=0.174 Sum_probs=76.1
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCCC
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP 121 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~~ 121 (354)
+|||+|+|++|.+|+.++..+...+...-+.++|.+...... ... ..+. ..+|+++.++++|+||... .|
T Consensus 1 ~mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~--~~~----~~i~---~~~dl~~ll~~~DvVid~t-~p 70 (257)
T PRK00048 1 MIKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVG--QGA----LGVA---ITDDLEAVLADADVLIDFT-TP 70 (257)
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccc--cCC----CCcc---ccCCHHHhccCCCEEEECC-CH
Confidence 479999998899999999887765433334558876521110 111 1121 2357778788999999763 11
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCC-CEEEe-ccchH---HHHH
Q 018512 122 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPK-KLLGV-TMLDV---VRAN 196 (354)
Q Consensus 122 ~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~-kviG~-t~ld~---~r~~ 196 (354)
....+++..+.+.+.+. + +. |.+....-+ +.+.++.. .. -++.. ..+.. .++-
T Consensus 71 ---------------~~~~~~~~~al~~G~~v--v-ig-ttG~s~~~~-~~l~~aa~--~~~v~~s~n~s~g~~~~~~l~ 128 (257)
T PRK00048 71 ---------------EATLENLEFALEHGKPL--V-IG-TTGFTEEQL-AELEEAAK--KIPVVIAPNFSIGVNLLMKLA 128 (257)
T ss_pred ---------------HHHHHHHHHHHHcCCCE--E-EE-CCCCCHHHH-HHHHHHhc--CCCEEEECcchHHHHHHHHHH
Confidence 12345566666565543 2 33 333222111 12233221 11 22222 22222 3444
Q ss_pred HHHHHHhCCCCCCCcceEEeecCC
Q 018512 197 TFVAEVLGLDPRDVDVPVVGGHAG 220 (354)
Q Consensus 197 ~~la~~l~v~~~~v~~~v~G~hg~ 220 (354)
..+++.|+ + .++.++--|+.
T Consensus 129 ~~aa~~l~--~--~d~ei~E~HH~ 148 (257)
T PRK00048 129 EKAAKYLG--D--YDIEIIEAHHR 148 (257)
T ss_pred HHHHHhcC--C--CCEEEEEccCC
Confidence 55555664 2 67788888877
No 404
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=96.03 E-value=0.042 Score=50.28 Aligned_cols=36 Identities=31% Similarity=0.416 Sum_probs=31.5
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 78 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~ 78 (354)
+..||+|+|+ |.+|+.++..|+..|.. ++.|+|.+.
T Consensus 20 ~~~~VlivG~-GglGs~va~~La~~Gvg-~i~lvD~D~ 55 (228)
T cd00757 20 KNARVLVVGA-GGLGSPAAEYLAAAGVG-KLGLVDDDV 55 (228)
T ss_pred hCCcEEEECC-CHHHHHHHHHHHHcCCC-EEEEEcCCE
Confidence 3458999999 99999999999998864 899999874
No 405
>TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type. This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity.
Probab=95.98 E-value=0.038 Score=53.39 Aligned_cols=74 Identities=15% Similarity=0.141 Sum_probs=51.4
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEE
Q 018512 39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVII 116 (354)
Q Consensus 39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi 116 (354)
+....+++|||+ |..|...+..+.......+|.++|++. ++..+.++.+. ...+.. ..+.++++++||+|+.
T Consensus 125 ~~~~~~lgiiG~-G~qA~~~l~al~~~~~~~~v~V~~r~~~~~~~~~~~~~~~--g~~v~~---~~~~~eav~~aDiVit 198 (325)
T TIGR02371 125 RKDSSVLGIIGA-GRQAWTQLEALSRVFDLEEVSVYCRTPSTREKFALRASDY--EVPVRA---ATDPREAVEGCDILVT 198 (325)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhh--CCcEEE---eCCHHHHhccCCEEEE
Confidence 445679999999 999998766665544567999999987 23333444432 222333 2467899999999998
Q ss_pred cC
Q 018512 117 PA 118 (354)
Q Consensus 117 ~a 118 (354)
+.
T Consensus 199 aT 200 (325)
T TIGR02371 199 TT 200 (325)
T ss_pred ec
Confidence 64
No 406
>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]
Probab=95.96 E-value=0.041 Score=48.23 Aligned_cols=110 Identities=23% Similarity=0.182 Sum_probs=72.5
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEE----EeCCCcHHhhhCCCcEEEE
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG----FLGQPQLENALTGMDLVII 116 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~----~~~~~d~~~al~~aDvVIi 116 (354)
++|...|+||+|-+|+.+...+...+.++.|+++-++++ -+..+...+.. +..-.++.++++|.|+.+.
T Consensus 17 q~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~-------~d~at~k~v~q~~vDf~Kl~~~a~~~qg~dV~Fc 89 (238)
T KOG4039|consen 17 QNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRREL-------PDPATDKVVAQVEVDFSKLSQLATNEQGPDVLFC 89 (238)
T ss_pred hccceEEEeccccccHHHHHHHHhcccceeEEEEEeccC-------CCccccceeeeEEechHHHHHHHhhhcCCceEEE
Confidence 344567999999999999999999999999999988651 11111111111 1111356788999999999
Q ss_pred cCCCCC-CCC---CCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCC
Q 018512 117 PAGVPR-KPG---MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV 162 (354)
Q Consensus 117 ~ag~~~-~~g---~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv 162 (354)
+-|..+ +.| ..+-| -..+.+.++..++.+-+.++++.|--+
T Consensus 90 aLgTTRgkaGadgfykvD-----hDyvl~~A~~AKe~Gck~fvLvSS~GA 134 (238)
T KOG4039|consen 90 ALGTTRGKAGADGFYKVD-----HDYVLQLAQAAKEKGCKTFVLVSSAGA 134 (238)
T ss_pred eecccccccccCceEeec-----hHHHHHHHHHHHhCCCeEEEEEeccCC
Confidence 765443 333 22222 245567777777777788888776433
No 407
>PLN02928 oxidoreductase family protein
Probab=95.95 E-value=0.038 Score=53.95 Aligned_cols=104 Identities=23% Similarity=0.166 Sum_probs=60.8
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHh--cCCCCCeEEEEeCCCcHHhhhCCCcEEEEc
Q 018512 40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADIS--HMDTGAVVRGFLGQPQLENALTGMDLVIIP 117 (354)
Q Consensus 40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~--~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ 117 (354)
-..++|.|+|. |.+|+.+|..+..-|. +|+.+|+.........+. ...............++++.++.||+|++.
T Consensus 157 l~gktvGIiG~-G~IG~~vA~~l~afG~--~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~ 233 (347)
T PLN02928 157 LFGKTVFILGY-GAIGIELAKRLRPFGV--KLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLC 233 (347)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHhhCCC--EEEEECCCCChhhhhhhccccccccccccccCcccCHHHHHhhCCEEEEC
Confidence 34579999999 9999999999986666 999999863111111110 000000000000124688999999999997
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512 118 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 159 (354)
Q Consensus 118 ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t 159 (354)
.... + .|-.++. .+.+.+..|.+++||++
T Consensus 234 lPlt--~---------~T~~li~--~~~l~~Mk~ga~lINva 262 (347)
T PLN02928 234 CTLT--K---------ETAGIVN--DEFLSSMKKGALLVNIA 262 (347)
T ss_pred CCCC--h---------HhhcccC--HHHHhcCCCCeEEEECC
Confidence 4321 1 1111111 23344445789999997
No 408
>PRK13302 putative L-aspartate dehydrogenase; Provisional
Probab=95.94 E-value=0.07 Score=50.22 Aligned_cols=71 Identities=24% Similarity=0.231 Sum_probs=45.5
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhC-CCCcEEE-EEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEc
Q 018512 40 AAGFKVAILGAAGGIGQPLAMLMKIN-PLVSVLH-LYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP 117 (354)
Q Consensus 40 ~~~~kI~IiGa~G~vG~~~a~~l~~~-~~~~ei~-L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ 117 (354)
.+++||+|||. |.+|..++..|... +.. +++ ++|+++.. +.++....... .. .+++++.+.++|+|+++
T Consensus 4 m~~irIGIIG~-G~IG~~~a~~L~~~~~~~-el~aV~dr~~~~--a~~~a~~~g~~--~~---~~~~eell~~~D~Vvi~ 74 (271)
T PRK13302 4 RPELRVAIAGL-GAIGKAIAQALDRGLPGL-TLSAVAVRDPQR--HADFIWGLRRP--PP---VVPLDQLATHADIVVEA 74 (271)
T ss_pred CCeeEEEEECc-cHHHHHHHHHHHhcCCCe-EEEEEECCCHHH--HHHHHHhcCCC--cc---cCCHHHHhcCCCEEEEC
Confidence 45689999999 99999999888763 222 554 78886522 12222111001 11 23567778999999998
Q ss_pred CC
Q 018512 118 AG 119 (354)
Q Consensus 118 ag 119 (354)
+.
T Consensus 75 tp 76 (271)
T PRK13302 75 AP 76 (271)
T ss_pred CC
Confidence 64
No 409
>PF02423 OCD_Mu_crystall: Ornithine cyclodeaminase/mu-crystallin family; InterPro: IPR003462 This entry represents the bacterial ornithine cyclodeaminase enzyme family, which catalyse the deamination of ornithine to proline []. The family also includes mu-crystallin, a mammalian homologue of bacterial ornithine cyclodeaminase [], which is the major component of the eye lens in several Australian marsupials. mRNA for mu-crystallin has also been found in human retina [].; PDB: 1U7H_B 1X7D_B 2I99_B 3HDJ_A 1VLL_B 1OMO_A.
Probab=95.91 E-value=0.031 Score=53.71 Aligned_cols=74 Identities=15% Similarity=0.218 Sum_probs=47.1
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEE
Q 018512 39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVII 116 (354)
Q Consensus 39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi 116 (354)
+....+++|||+ |..+..-+..+..--.+.+|.++|++. ++..+.++.+ . ...+... .+.++|+++||+|+.
T Consensus 125 ~~~~~~l~viGa-G~QA~~~~~a~~~~~~i~~v~v~~r~~~~~~~~~~~~~~-~-~~~v~~~---~~~~~av~~aDii~t 198 (313)
T PF02423_consen 125 RPDARTLGVIGA-GVQARWHLRALAAVRPIKEVRVYSRSPERAEAFAARLRD-L-GVPVVAV---DSAEEAVRGADIIVT 198 (313)
T ss_dssp -TT--EEEEE---SHHHHHHHHHHHHHS--SEEEEE-SSHHHHHHHHHHHHC-C-CTCEEEE---SSHHHHHTTSSEEEE
T ss_pred cCCCceEEEECC-CHHHHHHHHHHHHhCCceEEEEEccChhHHHHHHHhhcc-c-cccceec---cchhhhcccCCEEEE
Confidence 444558999999 998888777665533378999999987 4455666776 2 3445443 467899999999998
Q ss_pred cC
Q 018512 117 PA 118 (354)
Q Consensus 117 ~a 118 (354)
+.
T Consensus 199 aT 200 (313)
T PF02423_consen 199 AT 200 (313)
T ss_dssp --
T ss_pred cc
Confidence 53
No 410
>PRK08291 ectoine utilization protein EutC; Validated
Probab=95.91 E-value=0.052 Score=52.54 Aligned_cols=75 Identities=15% Similarity=0.232 Sum_probs=50.5
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEc
Q 018512 40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP 117 (354)
Q Consensus 40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ 117 (354)
...++|+|+|+ |..|...+..+.....+.+|.+++++. ++..+.++.+.. ...+.. ..++++++.+||+||.+
T Consensus 130 ~~~~~v~IiGa-G~~a~~~~~al~~~~~~~~V~v~~R~~~~a~~l~~~~~~~~-g~~v~~---~~d~~~al~~aDiVi~a 204 (330)
T PRK08291 130 EDASRAAVIGA-GEQARLQLEALTLVRPIREVRVWARDAAKAEAYAADLRAEL-GIPVTV---ARDVHEAVAGADIIVTT 204 (330)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHhhcc-CceEEE---eCCHHHHHccCCEEEEe
Confidence 34569999999 999998877776533356999999986 333344443221 122332 24678999999999887
Q ss_pred CC
Q 018512 118 AG 119 (354)
Q Consensus 118 ag 119 (354)
..
T Consensus 205 T~ 206 (330)
T PRK08291 205 TP 206 (330)
T ss_pred eC
Confidence 43
No 411
>PLN02494 adenosylhomocysteinase
Probab=95.90 E-value=0.18 Score=50.97 Aligned_cols=93 Identities=22% Similarity=0.180 Sum_probs=61.6
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCch-hHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 119 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~-g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag 119 (354)
...+|+|+|. |.+|..++..+...|. +|+.+|+++.+ ..+. .+ .+ . . .+++++++++|+||.+.|
T Consensus 253 aGKtVvViGy-G~IGr~vA~~aka~Ga--~VIV~e~dp~r~~eA~--~~-G~--~--v----v~leEal~~ADVVI~tTG 318 (477)
T PLN02494 253 AGKVAVICGY-GDVGKGCAAAMKAAGA--RVIVTEIDPICALQAL--ME-GY--Q--V----LTLEDVVSEADIFVTTTG 318 (477)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCC--EEEEEeCCchhhHHHH--hc-CC--e--e----ccHHHHHhhCCEEEECCC
Confidence 4569999999 9999999999987776 89999998632 1221 11 11 1 1 135678999999999755
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCC
Q 018512 120 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNS 164 (354)
Q Consensus 120 ~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~ 164 (354)
... ++. .+.+....+.+++++++-+.+.
T Consensus 319 t~~---------------vI~--~e~L~~MK~GAiLiNvGr~~~e 346 (477)
T PLN02494 319 NKD---------------IIM--VDHMRKMKNNAIVCNIGHFDNE 346 (477)
T ss_pred Ccc---------------chH--HHHHhcCCCCCEEEEcCCCCCc
Confidence 321 110 2333344578999999876433
No 412
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.88 E-value=0.26 Score=46.63 Aligned_cols=113 Identities=17% Similarity=0.325 Sum_probs=72.7
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEE-eCC----------CcHHhh
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF-LGQ----------PQLENA 107 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~-~~~----------~d~~~a 107 (354)
....|.|+||++-+|..+|..++..+. .++|.|++. .+..+..+.+.. .+..+ .+- ...++.
T Consensus 37 ~g~~vLITGgg~GlGr~ialefa~rg~--~~vl~Din~~~~~etv~~~~~~g---~~~~y~cdis~~eei~~~a~~Vk~e 111 (300)
T KOG1201|consen 37 SGEIVLITGGGSGLGRLIALEFAKRGA--KLVLWDINKQGNEETVKEIRKIG---EAKAYTCDISDREEIYRLAKKVKKE 111 (300)
T ss_pred cCCEEEEeCCCchHHHHHHHHHHHhCC--eEEEEeccccchHHHHHHHHhcC---ceeEEEecCCCHHHHHHHHHHHHHh
Confidence 345899999988999999999999887 899999997 333344444321 11111 000 123566
Q ss_pred hCCCcEEEEcCCCC-CCCC--CCHHHH---HHHH----HHHHHHHHHHHhhhCCCeEEEEec
Q 018512 108 LTGMDLVIIPAGVP-RKPG--MTRDDL---FNIN----AGIVRTLCEGIAKCCPNATVNLIS 159 (354)
Q Consensus 108 l~~aDvVIi~ag~~-~~~g--~~r~d~---~~~n----~~~~~~i~~~i~~~~p~a~viv~t 159 (354)
..+.|++|..||.. .+.- .++.+. +.-| .-.++++.+.|.+. .++.|+.++
T Consensus 112 ~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~-~~GHIV~Ia 172 (300)
T KOG1201|consen 112 VGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLEN-NNGHIVTIA 172 (300)
T ss_pred cCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhc-CCceEEEeh
Confidence 78999999999964 3332 233221 2223 46778888998865 466666654
No 413
>TIGR01724 hmd_rel H2-forming N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase-related protein. This model represents a sister clade to the authenticated coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase (HMD) of TIGR01723. Two members, designated HmdII and HmdIII, are found. Members are restricted to methanogens, but the function is unknown.
Probab=95.87 E-value=0.081 Score=50.74 Aligned_cols=55 Identities=7% Similarity=0.058 Sum_probs=37.9
Q ss_pred HHHHHHHHHhCCCCcEEEEEecCCc---hhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512 55 GQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 118 (354)
Q Consensus 55 G~~~a~~l~~~~~~~ei~L~D~~~~---~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a 118 (354)
|+..|..|+..|+ +|+++|++.. ......+.+... .. ..+..++.++||+||.+-
T Consensus 32 GspMArnLlkAGh--eV~V~Drnrsa~e~e~~e~LaeaGA----~~---AaS~aEAAa~ADVVIL~L 89 (341)
T TIGR01724 32 GSRMAIEFAMAGH--DVVLAEPNREFMSDDLWKKVEDAGV----KV---VSDDKEAAKHGEIHVLFT 89 (341)
T ss_pred HHHHHHHHHHCCC--EEEEEeCChhhhhhhhhHHHHHCCC----ee---cCCHHHHHhCCCEEEEec
Confidence 6788888888898 9999998752 122233444331 11 234578999999999984
No 414
>PRK08303 short chain dehydrogenase; Provisional
Probab=95.84 E-value=0.26 Score=47.04 Aligned_cols=34 Identities=18% Similarity=0.215 Sum_probs=30.5
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecC
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV 77 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~ 77 (354)
.+.+.|+||++.+|..++..|+..|. .|++.+++
T Consensus 8 ~k~~lITGgs~GIG~aia~~la~~G~--~Vv~~~r~ 41 (305)
T PRK08303 8 GKVALVAGATRGAGRGIAVELGAAGA--TVYVTGRS 41 (305)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEecc
Confidence 45899999999999999999999887 89999986
No 415
>PRK08017 oxidoreductase; Provisional
Probab=95.82 E-value=0.084 Score=48.20 Aligned_cols=33 Identities=24% Similarity=0.193 Sum_probs=30.0
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512 44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 78 (354)
Q Consensus 44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~ 78 (354)
+|.|+||+|.+|.+++..|+..|. +|++++++.
T Consensus 4 ~vlVtGasg~IG~~la~~l~~~g~--~v~~~~r~~ 36 (256)
T PRK08017 4 SVLITGCSSGIGLEAALELKRRGY--RVLAACRKP 36 (256)
T ss_pred EEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCH
Confidence 799999999999999999998887 889998865
No 416
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=95.82 E-value=0.062 Score=49.69 Aligned_cols=35 Identities=26% Similarity=0.376 Sum_probs=31.2
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 78 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~ 78 (354)
..||+|+|+ |.+|+.++..|+..|.. +++++|.+.
T Consensus 24 ~~~VlvvG~-GglGs~va~~La~~Gvg-~i~lvD~D~ 58 (240)
T TIGR02355 24 ASRVLIVGL-GGLGCAASQYLAAAGVG-NLTLLDFDT 58 (240)
T ss_pred CCcEEEECc-CHHHHHHHHHHHHcCCC-EEEEEeCCc
Confidence 458999999 99999999999998864 899999875
No 417
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=95.82 E-value=0.049 Score=50.22 Aligned_cols=112 Identities=13% Similarity=0.081 Sum_probs=58.4
Q ss_pred EEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhH--H-HHHhcCC--------CCCeEEEEeCC----------Cc
Q 018512 47 ILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGV--T-ADISHMD--------TGAVVRGFLGQ----------PQ 103 (354)
Q Consensus 47 IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~--~-~dl~~~~--------~~~~v~~~~~~----------~d 103 (354)
|+||+||+|+++...|+..+...+|+++-+... .+. . ..+.+.. ...+++.+.+. .+
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~ 80 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED 80 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence 689999999999998887765227887776541 111 1 1111110 02334443221 12
Q ss_pred HHhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512 104 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 159 (354)
Q Consensus 104 ~~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t 159 (354)
+.+-.+.+|+||++|+...-. ....++...|+...+++++...+.....++.+.|
T Consensus 81 ~~~L~~~v~~IiH~Aa~v~~~-~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iST 135 (249)
T PF07993_consen 81 YQELAEEVDVIIHCAASVNFN-APYSELRAVNVDGTRNLLRLAAQGKRKRFHYIST 135 (249)
T ss_dssp HHHHHHH--EEEE--SS-SBS--S--EEHHHHHHHHHHHHHHHTSSS---EEEEEE
T ss_pred hhccccccceeeecchhhhhc-ccchhhhhhHHHHHHHHHHHHHhccCcceEEecc
Confidence 333347899999998754221 2334466889999999999998654445445444
No 418
>PLN02350 phosphogluconate dehydrogenase (decarboxylating)
Probab=95.81 E-value=0.038 Score=56.36 Aligned_cols=70 Identities=19% Similarity=0.197 Sum_probs=47.3
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcC----CCCCeEEEEeCCCcHHhhhC---CCc
Q 018512 40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHM----DTGAVVRGFLGQPQLENALT---GMD 112 (354)
Q Consensus 40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~----~~~~~v~~~~~~~d~~~al~---~aD 112 (354)
...++|.+||- |.+|+++|..|+..|. +|+++|++..+. .++.+. .. ..+.. ..+++++.+ .+|
T Consensus 4 ~~~~~IG~IGL-G~MG~~mA~nL~~~G~--~V~V~NRt~~k~--~~l~~~~~~~Ga-~~~~~---a~s~~e~v~~l~~~d 74 (493)
T PLN02350 4 AALSRIGLAGL-AVMGQNLALNIAEKGF--PISVYNRTTSKV--DETVERAKKEGN-LPLYG---FKDPEDFVLSIQKPR 74 (493)
T ss_pred CCCCCEEEEee-HHHHHHHHHHHHhCCC--eEEEECCCHHHH--HHHHHhhhhcCC-ccccc---CCCHHHHHhcCCCCC
Confidence 44568999999 9999999999999998 999999975222 222211 11 11111 234555555 499
Q ss_pred EEEEcC
Q 018512 113 LVIIPA 118 (354)
Q Consensus 113 vVIi~a 118 (354)
+||++.
T Consensus 75 vIi~~v 80 (493)
T PLN02350 75 SVIILV 80 (493)
T ss_pred EEEEEC
Confidence 999974
No 419
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=95.80 E-value=0.17 Score=50.59 Aligned_cols=90 Identities=19% Similarity=0.148 Sum_probs=59.7
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCch-hHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 119 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~-g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag 119 (354)
+..+|+|+|+ |.+|..++..+...|. +|+.+|+++.+ ..+.. ... ... +.+++++++|+||.+.|
T Consensus 201 ~GktVvViG~-G~IG~~va~~ak~~Ga--~ViV~d~d~~R~~~A~~---~G~----~~~----~~~e~v~~aDVVI~atG 266 (413)
T cd00401 201 AGKVAVVAGY-GDVGKGCAQSLRGQGA--RVIVTEVDPICALQAAM---EGY----EVM----TMEEAVKEGDIFVTTTG 266 (413)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCC--EEEEEECChhhHHHHHh---cCC----EEc----cHHHHHcCCCEEEECCC
Confidence 4569999999 9999999999988887 78889998732 22221 111 111 23577899999999865
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCC
Q 018512 120 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP 161 (354)
Q Consensus 120 ~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNP 161 (354)
.+ ..+.. ..+....+.+++++++.+
T Consensus 267 ~~---------------~~i~~--~~l~~mk~GgilvnvG~~ 291 (413)
T cd00401 267 NK---------------DIITG--EHFEQMKDGAIVCNIGHF 291 (413)
T ss_pred CH---------------HHHHH--HHHhcCCCCcEEEEeCCC
Confidence 32 11211 113333478899999865
No 420
>PLN02712 arogenate dehydrogenase
Probab=95.79 E-value=0.059 Score=57.11 Aligned_cols=67 Identities=18% Similarity=0.244 Sum_probs=46.8
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhC-CCcEEEEc
Q 018512 39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT-GMDLVIIP 117 (354)
Q Consensus 39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~-~aDvVIi~ 117 (354)
+.+++||+|||. |.+|..++..|...|. +|+.+|++.....+. ... +.. ..++++.+. ++|+||++
T Consensus 366 ~~~~~kIgIIGl-G~mG~slA~~L~~~G~--~V~~~dr~~~~~~a~---~~G----v~~---~~~~~el~~~~aDvVILa 432 (667)
T PLN02712 366 DGSKLKIAIVGF-GNFGQFLAKTMVKQGH--TVLAYSRSDYSDEAQ---KLG----VSY---FSDADDLCEEHPEVILLC 432 (667)
T ss_pred CCCCCEEEEEec-CHHHHHHHHHHHHCcC--EEEEEECChHHHHHH---HcC----CeE---eCCHHHHHhcCCCEEEEC
Confidence 446689999998 9999999999988776 899999874211111 111 112 135556565 59999998
Q ss_pred C
Q 018512 118 A 118 (354)
Q Consensus 118 a 118 (354)
.
T Consensus 433 v 433 (667)
T PLN02712 433 T 433 (667)
T ss_pred C
Confidence 4
No 421
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=95.78 E-value=0.05 Score=54.44 Aligned_cols=104 Identities=17% Similarity=0.215 Sum_probs=64.6
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCch--hHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEc
Q 018512 40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP 117 (354)
Q Consensus 40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~--g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ 117 (354)
.+..+|+|+|+ |.+|..++..|...|. .+|+++|++..+ ..+.++. .. .+ ...++.+++.++|+||.+
T Consensus 178 l~~~~VlViGa-G~iG~~~a~~L~~~G~-~~V~v~~rs~~ra~~la~~~g-----~~--~i-~~~~l~~~l~~aDvVi~a 247 (417)
T TIGR01035 178 LKGKKALLIGA-GEMGELVAKHLLRKGV-GKILIANRTYERAEDLAKELG-----GE--AV-KFEDLEEYLAEADIVISS 247 (417)
T ss_pred ccCCEEEEECC-hHHHHHHHHHHHHCCC-CEEEEEeCCHHHHHHHHHHcC-----Ce--Ee-eHHHHHHHHhhCCEEEEC
Confidence 44569999999 9999999999988773 389999997522 2222221 11 11 123567889999999998
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCch
Q 018512 118 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTV 166 (354)
Q Consensus 118 ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~ 166 (354)
.+.+... .+ . +..+.+.... ...+++-.++|-|+-.
T Consensus 248 T~s~~~i-i~-~-----------e~l~~~~~~~~~~~~viDla~Prdid~ 284 (417)
T TIGR01035 248 TGAPHPI-VS-K-----------EDVERALRERTRPLFIIDIAVPRDVDP 284 (417)
T ss_pred CCCCCce-Ec-H-----------HHHHHHHhcCCCCeEEEEeCCCCCCCh
Confidence 6654311 11 1 1111111111 2357888899988873
No 422
>PRK08618 ornithine cyclodeaminase; Validated
Probab=95.78 E-value=0.055 Score=52.29 Aligned_cols=76 Identities=9% Similarity=0.146 Sum_probs=50.1
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEE
Q 018512 39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVII 116 (354)
Q Consensus 39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi 116 (354)
+....+|+|||+ |..|...+..++....+.+|.++|+++. ...+.++.+. ....+..+ .++++++.+||+||.
T Consensus 124 ~~~~~~v~iiGa-G~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~-~~~~~~~~---~~~~~~~~~aDiVi~ 198 (325)
T PRK08618 124 REDAKTLCLIGT-GGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSK-FNTEIYVV---NSADEAIEEADIIVT 198 (325)
T ss_pred CCCCcEEEEECC-cHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHh-cCCcEEEe---CCHHHHHhcCCEEEE
Confidence 334568999999 9999887766654434579999999862 3333344322 11223332 467889999999998
Q ss_pred cCC
Q 018512 117 PAG 119 (354)
Q Consensus 117 ~ag 119 (354)
+-.
T Consensus 199 aT~ 201 (325)
T PRK08618 199 VTN 201 (325)
T ss_pred ccC
Confidence 743
No 423
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=95.77 E-value=0.12 Score=44.60 Aligned_cols=67 Identities=12% Similarity=0.070 Sum_probs=44.3
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 118 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a 118 (354)
+..||.|+|| |.||...+..|+..|. +|++++.+... ...++. ...+.. ..-+ ++.++++|+||.+.
T Consensus 12 ~~~~vlVvGG-G~va~rka~~Ll~~ga--~V~VIsp~~~~-~l~~l~----~i~~~~--~~~~-~~dl~~a~lViaaT 78 (157)
T PRK06719 12 HNKVVVIIGG-GKIAYRKASGLKDTGA--FVTVVSPEICK-EMKELP----YITWKQ--KTFS-NDDIKDAHLIYAAT 78 (157)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC--EEEEEcCccCH-HHHhcc----CcEEEe--cccC-hhcCCCceEEEECC
Confidence 3459999999 9999999999999888 88999754322 112221 111111 1112 35689999999973
No 424
>PRK08862 short chain dehydrogenase; Provisional
Probab=95.77 E-value=0.33 Score=44.09 Aligned_cols=115 Identities=13% Similarity=0.101 Sum_probs=65.3
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEE-eCCCc---HH-------hhh
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF-LGQPQ---LE-------NAL 108 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~-~~~~d---~~-------~al 108 (354)
.+.+.|+||++.+|..++..|+..|. .|++++++. .+....++.... ..+..+ .+..+ .+ +.+
T Consensus 5 ~k~~lVtGas~GIG~aia~~la~~G~--~V~~~~r~~~~l~~~~~~i~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (227)
T PRK08862 5 SSIILITSAGSVLGRTISCHFARLGA--TLILCDQDQSALKDTYEQCSALT--DNVYSFQLKDFSQESIRHLFDAIEQQF 80 (227)
T ss_pred CeEEEEECCccHHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHhcC--CCeEEEEccCCCHHHHHHHHHHHHHHh
Confidence 35899999989999999999999998 899999876 222223333221 112111 11112 21 122
Q ss_pred C-CCcEEEEcCCCCCCC----CCCHHHH---HHHHH----HHHHHHHHHHhhhCCCeEEEEecC
Q 018512 109 T-GMDLVIIPAGVPRKP----GMTRDDL---FNINA----GIVRTLCEGIAKCCPNATVNLISN 160 (354)
Q Consensus 109 ~-~aDvVIi~ag~~~~~----g~~r~d~---~~~n~----~~~~~i~~~i~~~~p~a~viv~tN 160 (354)
. ..|++|..+|..... ..+..++ +..|. ...+...+.+++....+.|+++|.
T Consensus 81 g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS 144 (227)
T PRK08862 81 NRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVIS 144 (227)
T ss_pred CCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEec
Confidence 3 689999998743221 1222222 22232 344555666665544566776664
No 425
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=95.77 E-value=0.17 Score=50.30 Aligned_cols=92 Identities=23% Similarity=0.185 Sum_probs=58.7
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512 40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 119 (354)
Q Consensus 40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag 119 (354)
....+|+|+|. |.+|..++..+...|. +|+.+|.++.+.... ..+ .+ .. .+.+++++++|+||.+.|
T Consensus 193 l~Gk~VvViG~-G~IG~~vA~~ak~~Ga--~ViV~d~dp~r~~~A-~~~-G~----~v----~~leeal~~aDVVItaTG 259 (406)
T TIGR00936 193 IAGKTVVVAGY-GWCGKGIAMRARGMGA--RVIVTEVDPIRALEA-AMD-GF----RV----MTMEEAAKIGDIFITATG 259 (406)
T ss_pred CCcCEEEEECC-CHHHHHHHHHHhhCcC--EEEEEeCChhhHHHH-Hhc-CC----Ee----CCHHHHHhcCCEEEECCC
Confidence 34569999999 9999999999987776 899999887321111 111 11 11 124678899999998754
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCC
Q 018512 120 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP 161 (354)
Q Consensus 120 ~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNP 161 (354)
.+ .++.. +.+....+.+++++++-+
T Consensus 260 ~~---------------~vI~~--~~~~~mK~GailiN~G~~ 284 (406)
T TIGR00936 260 NK---------------DVIRG--EHFENMKDGAIVANIGHF 284 (406)
T ss_pred CH---------------HHHHH--HHHhcCCCCcEEEEECCC
Confidence 22 12221 122223367888888754
No 426
>PRK07340 ornithine cyclodeaminase; Validated
Probab=95.76 E-value=0.051 Score=52.04 Aligned_cols=74 Identities=14% Similarity=0.113 Sum_probs=51.1
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEE
Q 018512 39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVII 116 (354)
Q Consensus 39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi 116 (354)
+....+|+|+|+ |..|...+..+.......+|.++|++. ++..+.++... ...+. ..+.++++.+||+||.
T Consensus 122 ~~~~~~v~IiGa-G~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~--~~~~~----~~~~~~av~~aDiVit 194 (304)
T PRK07340 122 PAPPGDLLLIGT-GVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARAL--GPTAE----PLDGEAIPEAVDLVVT 194 (304)
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhc--CCeeE----ECCHHHHhhcCCEEEE
Confidence 445569999999 999999988886533336899999986 33344444432 12222 1356789999999999
Q ss_pred cCC
Q 018512 117 PAG 119 (354)
Q Consensus 117 ~ag 119 (354)
+..
T Consensus 195 aT~ 197 (304)
T PRK07340 195 ATT 197 (304)
T ss_pred ccC
Confidence 743
No 427
>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form. This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.
Probab=95.75 E-value=0.061 Score=52.48 Aligned_cols=74 Identities=24% Similarity=0.265 Sum_probs=43.8
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEE-EEecCCchhHHH-H-HhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLH-LYDVVNTPGVTA-D-ISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 119 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~-L~D~~~~~g~~~-d-l~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag 119 (354)
|||+|+||+|.+|..++..|...+.. +++ +++.+...+... + ..+......+.. . ..+.++.++++|+||++.+
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~hP~~-el~~l~~s~~sagk~~~~~~~~l~~~~~~~~-~-~~~~~~~~~~~DvVf~alP 77 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNHPEV-EITYLVSSRESAGKPVSEVHPHLRGLVDLNL-E-PIDEEEIAEDADVVFLALP 77 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCc-eEEEEeccchhcCCChHHhCccccccCCcee-e-cCCHHHhhcCCCEEEECCC
Confidence 58999999999999999998866543 666 667654222211 1 111111011111 1 1234444469999999853
No 428
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.73 E-value=0.22 Score=45.99 Aligned_cols=35 Identities=17% Similarity=0.098 Sum_probs=29.7
Q ss_pred CCeEEEEcCC--CchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512 42 GFKVAILGAA--GGIGQPLAMLMKINPLVSVLHLYDVVN 78 (354)
Q Consensus 42 ~~kI~IiGa~--G~vG~~~a~~l~~~~~~~ei~L~D~~~ 78 (354)
.+.+.|+||+ +.+|..++..|+..|. .|++.|++.
T Consensus 10 ~k~~lItGas~g~GIG~a~a~~la~~G~--~v~l~~r~~ 46 (258)
T PRK07533 10 GKRGLVVGIANEQSIAWGCARAFRALGA--ELAVTYLND 46 (258)
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHcCC--EEEEEeCCh
Confidence 3578999996 3799999999999887 899999875
No 429
>PRK08223 hypothetical protein; Validated
Probab=95.72 E-value=0.053 Score=51.37 Aligned_cols=36 Identities=22% Similarity=0.248 Sum_probs=32.0
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 78 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~ 78 (354)
+..||+|+|+ |-+|+.++..|+..|.. +|.|+|-|.
T Consensus 26 ~~s~VlIvG~-GGLGs~va~~LA~aGVG-~i~lvD~D~ 61 (287)
T PRK08223 26 RNSRVAIAGL-GGVGGIHLLTLARLGIG-KFTIADFDV 61 (287)
T ss_pred hcCCEEEECC-CHHHHHHHHHHHHhCCC-eEEEEeCCC
Confidence 4458999999 99999999999999975 899999885
No 430
>TIGR00465 ilvC ketol-acid reductoisomerase. This is the second enzyme in the parallel isoleucine-valine biosynthetic pathway
Probab=95.71 E-value=0.075 Score=51.16 Aligned_cols=65 Identities=20% Similarity=0.201 Sum_probs=44.0
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 118 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a 118 (354)
.+||+|||+ |++|.+++..|...+. +++..+....... ..+.... +.. . +..+++++||+|+++.
T Consensus 3 ~kkIgiIG~-G~mG~AiA~~L~~sG~--~Viv~~~~~~~~~-~~a~~~G----v~~---~-s~~ea~~~ADiVvLaV 67 (314)
T TIGR00465 3 GKTVAIIGY-GSQGHAQALNLRDSGL--NVIVGLRKGGASW-KKATEDG----FKV---G-TVEEAIPQADLIMNLL 67 (314)
T ss_pred cCEEEEEeE-cHHHHHHHHHHHHCCC--eEEEEECcChhhH-HHHHHCC----CEE---C-CHHHHHhcCCEEEEeC
Confidence 469999999 9999999999998887 6666555431111 1122111 121 1 3567889999999985
No 431
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=95.70 E-value=0.097 Score=47.20 Aligned_cols=70 Identities=17% Similarity=0.125 Sum_probs=47.7
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 119 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag 119 (354)
..||+|+|| |.+|..-+..|+..|. .|++++.+... ...++.... .+.......+ .+.+.++|+||.+.+
T Consensus 9 gk~vlVvGg-G~va~rk~~~Ll~~ga--~VtVvsp~~~~-~l~~l~~~~---~i~~~~~~~~-~~dl~~~~lVi~at~ 78 (205)
T TIGR01470 9 GRAVLVVGG-GDVALRKARLLLKAGA--QLRVIAEELES-ELTLLAEQG---GITWLARCFD-ADILEGAFLVIAATD 78 (205)
T ss_pred CCeEEEECc-CHHHHHHHHHHHHCCC--EEEEEcCCCCH-HHHHHHHcC---CEEEEeCCCC-HHHhCCcEEEEECCC
Confidence 349999999 9999999999998887 89999976432 222343322 2333222223 356899999998743
No 432
>PRK07041 short chain dehydrogenase; Provisional
Probab=95.70 E-value=0.07 Score=47.95 Aligned_cols=110 Identities=12% Similarity=0.179 Sum_probs=61.2
Q ss_pred EEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCe-EEE-EeCCCcHHhhhC---CCcEEEEcC
Q 018512 46 AILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAV-VRG-FLGQPQLENALT---GMDLVIIPA 118 (354)
Q Consensus 46 ~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~-v~~-~~~~~d~~~al~---~aDvVIi~a 118 (354)
.|+||+|.+|..++..|+..|. +|++++++.. .....++.. ..... +.. .....++.++++ ..|++|+.+
T Consensus 1 lItGas~~iG~~~a~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~a 77 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGA--RVTIASRSRDRLAAAARALGG-GAPVRTAALDITDEAAVDAFFAEAGPFDHVVITA 77 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHhc-CCceEEEEccCCCHHHHHHHHHhcCCCCEEEECC
Confidence 3899999999999999999887 8999998752 222222321 11111 111 111122333333 479999998
Q ss_pred CCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512 119 GVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 159 (354)
Q Consensus 119 g~~~~~---g~~---r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t 159 (354)
|..... ..+ ....+..|+.....+.+. ......+.|++++
T Consensus 78 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~-~~~~~~g~iv~~s 123 (230)
T PRK07041 78 ADTPGGPVRALPLAAAQAAMDSKFWGAYRVARA-ARIAPGGSLTFVS 123 (230)
T ss_pred CCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhh-hhhcCCeEEEEEC
Confidence 864321 111 233455666666666662 2233445555554
No 433
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.70 E-value=0.31 Score=45.07 Aligned_cols=155 Identities=13% Similarity=0.126 Sum_probs=80.2
Q ss_pred CCeEEEEcCCC--chHHHHHHHHHhCCCCcEEEEEecCC-chhHHHHHhcC-CCCCeEEE-EeCCCcH-------HhhhC
Q 018512 42 GFKVAILGAAG--GIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHM-DTGAVVRG-FLGQPQL-------ENALT 109 (354)
Q Consensus 42 ~~kI~IiGa~G--~vG~~~a~~l~~~~~~~ei~L~D~~~-~~g~~~dl~~~-~~~~~v~~-~~~~~d~-------~~al~ 109 (354)
.+.+.|+||++ -+|..++..|+..|. .|++.+++. ......++... .....+.. +....+. .+.+.
T Consensus 8 ~k~~lITGas~~~GIG~a~a~~la~~G~--~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g 85 (260)
T PRK06603 8 GKKGLITGIANNMSISWAIAQLAKKHGA--ELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWG 85 (260)
T ss_pred CcEEEEECCCCCcchHHHHHHHHHHcCC--EEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcC
Confidence 34789999965 599999999998887 788888764 12223333321 11111111 1111111 12245
Q ss_pred CCcEEEEcCCCCCC-----C--CCCH---HHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHhCC
Q 018512 110 GMDLVIIPAGVPRK-----P--GMTR---DDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGT 178 (354)
Q Consensus 110 ~aDvVIi~ag~~~~-----~--g~~r---~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~~~ 178 (354)
..|++|..+|.... + ..+. ...+.-|+.....+.+.+...- .++.|++++...... +
T Consensus 86 ~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~------------~ 153 (260)
T PRK06603 86 SFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEK------------V 153 (260)
T ss_pred CccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCcccc------------C
Confidence 68999998886421 1 1122 2234445544444444332221 346777776433211 2
Q ss_pred CCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcc
Q 018512 179 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDV 212 (354)
Q Consensus 179 ~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~ 212 (354)
.|..-.++.+.-.-..|.+.+|..++ +..|++
T Consensus 154 ~~~~~~Y~asKaal~~l~~~la~el~--~~gIrV 185 (260)
T PRK06603 154 IPNYNVMGVAKAALEASVKYLANDMG--ENNIRV 185 (260)
T ss_pred CCcccchhhHHHHHHHHHHHHHHHhh--hcCeEE
Confidence 23223455555445567777887764 344443
No 434
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=95.66 E-value=0.11 Score=48.23 Aligned_cols=36 Identities=22% Similarity=0.368 Sum_probs=31.5
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 78 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~ 78 (354)
+..||+|+|+ |.+|+.++..|+..|.. ++.++|.+.
T Consensus 31 ~~~~VliiG~-GglGs~va~~La~~Gvg-~i~lvD~D~ 66 (245)
T PRK05690 31 KAARVLVVGL-GGLGCAASQYLAAAGVG-TLTLVDFDT 66 (245)
T ss_pred cCCeEEEECC-CHHHHHHHHHHHHcCCC-EEEEEcCCE
Confidence 3458999999 99999999999998864 899999875
No 435
>PRK06141 ornithine cyclodeaminase; Validated
Probab=95.64 E-value=0.072 Score=51.23 Aligned_cols=74 Identities=12% Similarity=0.191 Sum_probs=49.4
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEE
Q 018512 39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVII 116 (354)
Q Consensus 39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi 116 (354)
+....+|+|||+ |.+|...+..+.......+|.++|+++ .+..+.++.+.. ..+... .+.++++++||+|+.
T Consensus 122 ~~~~~~v~iiG~-G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g--~~~~~~---~~~~~av~~aDIVi~ 195 (314)
T PRK06141 122 RKDASRLLVVGT-GRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQG--FDAEVV---TDLEAAVRQADIISC 195 (314)
T ss_pred CCCCceEEEECC-cHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcC--CceEEe---CCHHHHHhcCCEEEE
Confidence 444569999998 999999987665532345999999976 333444444321 123332 356788999999976
Q ss_pred cC
Q 018512 117 PA 118 (354)
Q Consensus 117 ~a 118 (354)
+.
T Consensus 196 aT 197 (314)
T PRK06141 196 AT 197 (314)
T ss_pred ee
Confidence 54
No 436
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.63 E-value=0.51 Score=44.16 Aligned_cols=34 Identities=21% Similarity=0.037 Sum_probs=29.5
Q ss_pred CeEEEEcCC--CchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512 43 FKVAILGAA--GGIGQPLAMLMKINPLVSVLHLYDVVN 78 (354)
Q Consensus 43 ~kI~IiGa~--G~vG~~~a~~l~~~~~~~ei~L~D~~~ 78 (354)
+.+.|+||+ +-+|..++..|+..|. .|++.|++.
T Consensus 6 k~~lItGas~~~GIG~aiA~~la~~G~--~Vil~~r~~ 41 (274)
T PRK08415 6 KKGLIVGVANNKSIAYGIAKACFEQGA--ELAFTYLNE 41 (274)
T ss_pred cEEEEECCCCCCCHHHHHHHHHHHCCC--EEEEEecCH
Confidence 478999995 5799999999999987 899999874
No 437
>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol
Probab=95.61 E-value=0.097 Score=46.91 Aligned_cols=35 Identities=26% Similarity=0.370 Sum_probs=30.9
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 78 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~ 78 (354)
..||+|+|+ |.+|+.++..|+..|.. ++.++|.+.
T Consensus 19 ~s~VlviG~-gglGsevak~L~~~GVg-~i~lvD~d~ 53 (198)
T cd01485 19 SAKVLIIGA-GALGAEIAKNLVLAGID-SITIVDHRL 53 (198)
T ss_pred hCcEEEECC-CHHHHHHHHHHHHcCCC-EEEEEECCc
Confidence 458999999 88999999999999974 899999874
No 438
>TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase. This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446).
Probab=95.56 E-value=0.046 Score=51.75 Aligned_cols=60 Identities=18% Similarity=0.307 Sum_probs=43.7
Q ss_pred EEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512 47 ILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 118 (354)
Q Consensus 47 IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a 118 (354)
|||. |.+|..++..|+..|+ +|.++|+++.. ..++.... ... +.+..++++++|+||++.
T Consensus 1 ~IGl-G~mG~~mA~~L~~~G~--~V~v~dr~~~~--~~~l~~~g----~~~---~~s~~~~~~~advVil~v 60 (288)
T TIGR01692 1 FIGL-GNMGGPMAANLLKAGH--PVRVFDLFPDA--VEEAVAAG----AQA---AASPAEAAEGADRVITML 60 (288)
T ss_pred CCcc-cHhHHHHHHHHHhCCC--eEEEEeCCHHH--HHHHHHcC----Cee---cCCHHHHHhcCCEEEEeC
Confidence 5798 9999999999999887 89999987622 22233221 111 235678899999999985
No 439
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=95.56 E-value=0.11 Score=52.65 Aligned_cols=91 Identities=20% Similarity=0.208 Sum_probs=61.1
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchh-HHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512 40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG-VTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 118 (354)
Q Consensus 40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g-~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a 118 (354)
....+|+|+|. |.+|..+|..+...|. +|+.+|+++... .+. .+ .. .. .+++++++.||+||.+.
T Consensus 252 LaGKtVgVIG~-G~IGr~vA~rL~a~Ga--~ViV~e~dp~~a~~A~--~~-G~----~~----~~leell~~ADIVI~at 317 (476)
T PTZ00075 252 IAGKTVVVCGY-GDVGKGCAQALRGFGA--RVVVTEIDPICALQAA--ME-GY----QV----VTLEDVVETADIFVTAT 317 (476)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCC--EEEEEeCCchhHHHHH--hc-Cc----ee----ccHHHHHhcCCEEEECC
Confidence 34569999999 9999999999987777 899998876322 111 11 11 11 24678899999999986
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCC
Q 018512 119 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP 161 (354)
Q Consensus 119 g~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNP 161 (354)
|.+. ++. .+.+....|.+++++++-.
T Consensus 318 Gt~~---------------iI~--~e~~~~MKpGAiLINvGr~ 343 (476)
T PTZ00075 318 GNKD---------------IIT--LEHMRRMKNNAIVGNIGHF 343 (476)
T ss_pred Cccc---------------ccC--HHHHhccCCCcEEEEcCCC
Confidence 5321 111 1233444588999998754
No 440
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=95.56 E-value=0.083 Score=51.08 Aligned_cols=76 Identities=16% Similarity=0.217 Sum_probs=51.5
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEE
Q 018512 39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVII 116 (354)
Q Consensus 39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi 116 (354)
+....+++|||+ |..|...+..|.....+.+|.+++++. ++..+.++.+.. ...+.. ..++++++.+||+||.
T Consensus 126 ~~~~~~v~iiGa-G~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~-g~~v~~---~~~~~~av~~aDiVvt 200 (326)
T TIGR02992 126 REDSSVVAIFGA-GMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLL-GIDVTA---ATDPRAAMSGADIIVT 200 (326)
T ss_pred CCCCcEEEEECC-CHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhc-CceEEE---eCCHHHHhccCCEEEE
Confidence 334569999999 999998888776433356899999986 333444443221 122322 2467889999999999
Q ss_pred cCC
Q 018512 117 PAG 119 (354)
Q Consensus 117 ~ag 119 (354)
+..
T Consensus 201 aT~ 203 (326)
T TIGR02992 201 TTP 203 (326)
T ss_pred ecC
Confidence 743
No 441
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=95.55 E-value=0.24 Score=45.46 Aligned_cols=33 Identities=24% Similarity=0.265 Sum_probs=28.2
Q ss_pred eEEEEcCCCchHHHHHHHHHh----CCCCcEEEEEecCC
Q 018512 44 KVAILGAAGGIGQPLAMLMKI----NPLVSVLHLYDVVN 78 (354)
Q Consensus 44 kI~IiGa~G~vG~~~a~~l~~----~~~~~ei~L~D~~~ 78 (354)
.+.|+||+|.+|..++..|+. .|. .|++.+++.
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~--~V~~~~r~~ 38 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGS--VLVLSARND 38 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCc--EEEEEEcCH
Confidence 478999999999999999986 455 899999876
No 442
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=95.52 E-value=0.089 Score=55.18 Aligned_cols=137 Identities=16% Similarity=0.197 Sum_probs=81.7
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcH----HhhhCCCcEEEEc
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQL----ENALTGMDLVIIP 117 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~----~~al~~aDvVIi~ 117 (354)
..+|.|+|. |.+|+.++..|...++ +++++|.|+.. +..+.+.. .+-+.+ +.++. +..+++||.||++
T Consensus 400 ~~~vII~G~-Gr~G~~va~~L~~~g~--~vvvID~d~~~--v~~~~~~g-~~v~~G--Dat~~~~L~~agi~~A~~vv~~ 471 (601)
T PRK03659 400 KPQVIIVGF-GRFGQVIGRLLMANKM--RITVLERDISA--VNLMRKYG-YKVYYG--DATQLELLRAAGAEKAEAIVIT 471 (601)
T ss_pred cCCEEEecC-chHHHHHHHHHHhCCC--CEEEEECCHHH--HHHHHhCC-CeEEEe--eCCCHHHHHhcCCccCCEEEEE
Confidence 468999999 9999999999998888 89999998621 22233322 122222 12232 1336799999998
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEe-cCCCCCchHHHHHHHHHhCCCCCCCEEEeccchHHHHH
Q 018512 118 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI-SNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRAN 196 (354)
Q Consensus 118 ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~-tNPv~~~~~~~~~~~~~~~~~p~~kviG~t~ld~~r~~ 196 (354)
-+.+ ..|. .++..++++.|+..++.- .||.+.- .+++. | .+.++-=+...+.++-
T Consensus 472 ~~d~-----------~~n~----~i~~~~r~~~p~~~IiaRa~~~~~~~------~L~~~-G--a~~vv~e~~es~l~l~ 527 (601)
T PRK03659 472 CNEP-----------EDTM----KIVELCQQHFPHLHILARARGRVEAH------ELLQA-G--VTQFSRETFSSALELG 527 (601)
T ss_pred eCCH-----------HHHH----HHHHHHHHHCCCCeEEEEeCCHHHHH------HHHhC-C--CCEEEccHHHHHHHHH
Confidence 3211 3333 355667788899766654 4654332 23443 3 2345433443344554
Q ss_pred HHHHHHhCCCCCCC
Q 018512 197 TFVAEVLGLDPRDV 210 (354)
Q Consensus 197 ~~la~~l~v~~~~v 210 (354)
...=..+|++++++
T Consensus 528 ~~~L~~lg~~~~~~ 541 (601)
T PRK03659 528 RKTLVSLGMHPHQA 541 (601)
T ss_pred HHHHHHcCCCHHHH
Confidence 44556677776554
No 443
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=95.46 E-value=0.23 Score=44.91 Aligned_cols=32 Identities=19% Similarity=0.325 Sum_probs=26.9
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCCcEEEEE-ecC
Q 018512 44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLY-DVV 77 (354)
Q Consensus 44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~-D~~ 77 (354)
.+.|+||+|++|+.++..|+..|. +|++. +.+
T Consensus 3 ~~lItGa~g~iG~~l~~~l~~~g~--~v~~~~~~~ 35 (247)
T PRK09730 3 IALVTGGSRGIGRATALLLAQEGY--TVAVNYQQN 35 (247)
T ss_pred EEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCC
Confidence 689999999999999999998887 77664 443
No 444
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.46 E-value=0.11 Score=52.20 Aligned_cols=123 Identities=24% Similarity=0.320 Sum_probs=70.5
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhH---HHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV---TADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 118 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~---~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a 118 (354)
.++|.|+|+ |.+|..+|..|+..|. +|+++|.+..... ..++.... ++.+.... ..+...++|+||.++
T Consensus 5 ~k~v~iiG~-g~~G~~~A~~l~~~G~--~V~~~d~~~~~~~~~~~~~l~~~~----~~~~~~~~-~~~~~~~~d~vv~~~ 76 (450)
T PRK14106 5 GKKVLVVGA-GVSGLALAKFLKKLGA--KVILTDEKEEDQLKEALEELGELG----IELVLGEY-PEEFLEGVDLVVVSP 76 (450)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCC--EEEEEeCCchHHHHHHHHHHHhcC----CEEEeCCc-chhHhhcCCEEEECC
Confidence 468999999 7899999999999998 9999999752211 22332221 22221111 124467899999998
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCC--CchHHHHHHHHH
Q 018512 119 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN--STVPIAAEVFKK 175 (354)
Q Consensus 119 g~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~--~~~~~~~~~~~~ 175 (354)
|.+.... .....-..+++++...+...+.. + ..+|-+|=..+ ..+.+++..+..
T Consensus 77 g~~~~~~-~~~~a~~~~i~~~~~~~~~~~~~-~-~~vI~ITGS~GKTTt~~~l~~iL~~ 132 (450)
T PRK14106 77 GVPLDSP-PVVQAHKKGIEVIGEVELAYRFS-K-APIVAITGTNGKTTTTTLLGEIFKN 132 (450)
T ss_pred CCCCCCH-HHHHHHHCCCcEEeHHHHHHhhc-C-CCEEEEeCCCchHHHHHHHHHHHHH
Confidence 8653211 11122234566665555443322 2 34555654443 444555555543
No 445
>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional
Probab=95.46 E-value=0.044 Score=53.14 Aligned_cols=71 Identities=21% Similarity=0.440 Sum_probs=45.6
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCC-CcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPL-VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 119 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~-~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag 119 (354)
++||+|+||+|++|..++.+|...++ ..+|..+-.+...+...++.. ..+... .. + ..+++++|+||++.|
T Consensus 1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~~~g----~~i~v~-d~-~-~~~~~~vDvVf~A~g 72 (334)
T PRK14874 1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELSFKG----KELKVE-DL-T-TFDFSGVDIALFSAG 72 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeeeeCC----ceeEEe-eC-C-HHHHcCCCEEEECCC
Confidence 46999999999999999999988654 347777755442222222211 223322 11 2 245689999999864
No 446
>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase
Probab=95.45 E-value=0.033 Score=55.01 Aligned_cols=75 Identities=15% Similarity=0.202 Sum_probs=45.6
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhc--CCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISH--MDTGAVVRGFLGQPQLENALTGMDLVIIPA 118 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~--~~~~~~v~~~~~~~d~~~al~~aDvVIi~a 118 (354)
.++||+|+||+|.+|..+...|...+.. +|.++..+...|......+ ... ..+..+. ..+ .+.++++|+||++.
T Consensus 37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~-el~~l~s~~saG~~i~~~~~~l~~-~~~~~~~-~~~-~~~~~~~DvVf~Al 112 (381)
T PLN02968 37 EKKRIFVLGASGYTGAEVRRLLANHPDF-EITVMTADRKAGQSFGSVFPHLIT-QDLPNLV-AVK-DADFSDVDAVFCCL 112 (381)
T ss_pred cccEEEEECCCChHHHHHHHHHHhCCCC-eEEEEEChhhcCCCchhhCccccC-cccccee-cCC-HHHhcCCCEEEEcC
Confidence 5579999999999999999998887543 8888876542222111111 110 1111111 112 23479999999975
Q ss_pred C
Q 018512 119 G 119 (354)
Q Consensus 119 g 119 (354)
+
T Consensus 113 p 113 (381)
T PLN02968 113 P 113 (381)
T ss_pred C
Confidence 3
No 447
>PRK06407 ornithine cyclodeaminase; Provisional
Probab=95.44 E-value=0.072 Score=50.93 Aligned_cols=72 Identities=17% Similarity=0.074 Sum_probs=51.0
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 118 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a 118 (354)
..+++|||+ |..|..-+..+..-..+.+|.++|++. +...+.++.+.. ...+... .+.++++++||+|+.+.
T Consensus 117 a~~l~iiGa-G~QA~~~~~a~~~v~~i~~v~v~~r~~~~a~~f~~~~~~~~-~~~v~~~---~~~~eav~~aDIV~taT 190 (301)
T PRK06407 117 VENFTIIGS-GFQAETQLEGMASVYNPKRIRVYSRNFDHARAFAERFSKEF-GVDIRPV---DNAEAALRDADTITSIT 190 (301)
T ss_pred CcEEEEECC-cHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHHhc-CCcEEEe---CCHHHHHhcCCEEEEec
Confidence 458999999 999888777666555567999999987 344445555421 2234432 45789999999999863
No 448
>TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial.
Probab=95.43 E-value=0.042 Score=53.79 Aligned_cols=71 Identities=17% Similarity=0.237 Sum_probs=45.9
Q ss_pred CeEEEEcCCCchHHHHHHHHH-hCCC-CcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512 43 FKVAILGAAGGIGQPLAMLMK-INPL-VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 119 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~-~~~~-~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag 119 (354)
+||+|+||+|.||+.+...|. .+.. ..+++++......|....... ....+.. ..+ .+++.+.|+|++++|
T Consensus 1 ~~VavvGATG~VG~~ll~~L~~e~~fp~~~~~~~ss~~s~g~~~~f~~--~~~~v~~---~~~-~~~~~~vDivffa~g 73 (366)
T TIGR01745 1 KNVGLVGWRGMVGSVLMQRMQEERDFDAIRPVFFSTSQLGQAAPSFGG--TTGTLQD---AFD-IDALKALDIIITCQG 73 (366)
T ss_pred CeEEEEcCcCHHHHHHHHHHHhCCCCccccEEEEEchhhCCCcCCCCC--CcceEEc---Ccc-cccccCCCEEEEcCC
Confidence 489999999999999999888 4453 368888887542222111111 1112222 122 246899999999876
No 449
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=95.43 E-value=0.096 Score=52.49 Aligned_cols=105 Identities=18% Similarity=0.273 Sum_probs=64.7
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCch--hHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEc
Q 018512 40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP 117 (354)
Q Consensus 40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~--g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ 117 (354)
.+..+|+|+|+ |.+|..++..|...|. .+|+++|++..+ ..+.++. ..+.. ..++.+++.++|+||.+
T Consensus 180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~-~~V~v~~r~~~ra~~la~~~g-----~~~~~---~~~~~~~l~~aDvVI~a 249 (423)
T PRK00045 180 LSGKKVLVIGA-GEMGELVAKHLAEKGV-RKITVANRTLERAEELAEEFG-----GEAIP---LDELPEALAEADIVISS 249 (423)
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHHCCC-CeEEEEeCCHHHHHHHHHHcC-----CcEee---HHHHHHHhccCCEEEEC
Confidence 45579999999 9999999998887664 378999987522 2222221 11111 13566788999999998
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-hhCCCeEEEEecCCCCCch
Q 018512 118 AGVPRKPGMTRDDLFNINAGIVRTLCEGIA-KCCPNATVNLISNPVNSTV 166 (354)
Q Consensus 118 ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~-~~~p~a~viv~tNPv~~~~ 166 (354)
.+.+... .+. ..++.. +. +.....+++=.++|-|+-.
T Consensus 250 T~s~~~~-i~~--------~~l~~~---~~~~~~~~~vviDla~Prdid~ 287 (423)
T PRK00045 250 TGAPHPI-IGK--------GMVERA---LKARRHRPLLLVDLAVPRDIEP 287 (423)
T ss_pred CCCCCcE-EcH--------HHHHHH---HhhccCCCeEEEEeCCCCCCcc
Confidence 6654311 111 111111 11 1124567888899988874
No 450
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=95.41 E-value=0.089 Score=52.76 Aligned_cols=71 Identities=23% Similarity=0.201 Sum_probs=45.7
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEE-EeCCCcHHhh-hCCCcEEEEcC
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENA-LTGMDLVIIPA 118 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~~~d~~~a-l~~aDvVIi~a 118 (354)
|||.|+|+ |.+|..++..|...+. +++++|.++.. ...+........+.+ ......++++ +.++|.||++.
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~~g~--~v~vid~~~~~--~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~~ 73 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSGENN--DVTVIDTDEER--LRRLQDRLDVRTVVGNGSSPDVLREAGAEDADLLIAVT 73 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC--cEEEEECCHHH--HHHHHhhcCEEEEEeCCCCHHHHHHcCCCcCCEEEEec
Confidence 69999999 9999999999988887 89999987622 122221110011111 0011234445 78999999974
No 451
>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=95.41 E-value=0.053 Score=53.22 Aligned_cols=72 Identities=18% Similarity=0.150 Sum_probs=44.1
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCC-C-CcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINP-L-VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 119 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~-~-~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag 119 (354)
++||+|+||+|.+|..+..+++..+ . ..+++++......+...++.. ....... ..+ .+.++++|+||++++
T Consensus 1 m~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~~sg~~~~~f~g----~~~~v~~-~~~-~~~~~~~Divf~a~~ 74 (369)
T PRK06598 1 MKKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTSQAGGAAPSFGG----KEGTLQD-AFD-IDALKKLDIIITCQG 74 (369)
T ss_pred CeEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecchhhCCcccccCC----CcceEEe-cCC-hhHhcCCCEEEECCC
Confidence 3699999999999999998565554 3 456888766432222212221 1112121 122 256789999999875
No 452
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=95.38 E-value=0.063 Score=46.88 Aligned_cols=58 Identities=28% Similarity=0.466 Sum_probs=45.4
Q ss_pred CCCCCeEEEEcCCCc-hHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEc
Q 018512 39 GAAGFKVAILGAAGG-IGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP 117 (354)
Q Consensus 39 ~~~~~kI~IiGa~G~-vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ 117 (354)
.-+..||+|+|+ |. +|..++..|...+. +|.+.+++. .++.+.+++||+||.+
T Consensus 41 ~l~gk~vlViG~-G~~~G~~~a~~L~~~g~--~V~v~~r~~-----------------------~~l~~~l~~aDiVIsa 94 (168)
T cd01080 41 DLAGKKVVVVGR-SNIVGKPLAALLLNRNA--TVTVCHSKT-----------------------KNLKEHTKQADIVIVA 94 (168)
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHHhhCCC--EEEEEECCc-----------------------hhHHHHHhhCCEEEEc
Confidence 445679999999 86 58889999988876 788888641 2456789999999998
Q ss_pred CCCCC
Q 018512 118 AGVPR 122 (354)
Q Consensus 118 ag~~~ 122 (354)
.+.+.
T Consensus 95 t~~~~ 99 (168)
T cd01080 95 VGKPG 99 (168)
T ss_pred CCCCc
Confidence 77663
No 453
>PRK07877 hypothetical protein; Provisional
Probab=95.36 E-value=0.059 Score=57.38 Aligned_cols=94 Identities=19% Similarity=0.290 Sum_probs=59.1
Q ss_pred ccchhhhhhhhcccCC--------CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC-----chhH-------
Q 018512 23 LQENSCLRQAKCRAKG--------GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-----TPGV------- 82 (354)
Q Consensus 23 ~~~~~~~~~~~~~~~~--------~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~-----~~g~------- 82 (354)
|.+..|.+..-+|-.+ +-+..||+|+|+ | +|+.++..|+..|.+.+|.|+|-|. ++-+
T Consensus 80 ~~~~~~~~~r~~Rn~~~ig~~~Q~~L~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~di 157 (722)
T PRK07877 80 LGPREFRAVRLDRNRNKITAEEQERLGRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDL 157 (722)
T ss_pred CCHHHhhHHHhhchhhhCCHHHHHHHhcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhc
Confidence 4666665544444431 334579999999 9 9999999999999767999999875 1101
Q ss_pred --------HHHHhcCCCCCeEEEEeC---CCcHHhhhCCCcEEEEcC
Q 018512 83 --------TADISHMDTGAVVRGFLG---QPQLENALTGMDLVIIPA 118 (354)
Q Consensus 83 --------~~dl~~~~~~~~v~~~~~---~~d~~~al~~aDvVIi~a 118 (354)
+..+........+..+.. ..+..+-+.++|+||-+.
T Consensus 158 G~~Kv~~a~~~l~~inp~i~v~~~~~~i~~~n~~~~l~~~DlVvD~~ 204 (722)
T PRK07877 158 GVNKAVVAARRIAELDPYLPVEVFTDGLTEDNVDAFLDGLDVVVEEC 204 (722)
T ss_pred ccHHHHHHHHHHHHHCCCCEEEEEeccCCHHHHHHHhcCCCEEEECC
Confidence 111222222233444321 234556678999999973
No 454
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=95.35 E-value=0.15 Score=50.97 Aligned_cols=92 Identities=18% Similarity=0.143 Sum_probs=59.7
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCC
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV 120 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~ 120 (354)
...+|+|+|. |.+|..++..+...|. +|+++|+++.+.... ..... .. .+++++++++|+||.+.|.
T Consensus 211 ~Gk~VlViG~-G~IG~~vA~~lr~~Ga--~ViV~d~dp~ra~~A--~~~G~----~v----~~l~eal~~aDVVI~aTG~ 277 (425)
T PRK05476 211 AGKVVVVAGY-GDVGKGCAQRLRGLGA--RVIVTEVDPICALQA--AMDGF----RV----MTMEEAAELGDIFVTATGN 277 (425)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC--EEEEEcCCchhhHHH--HhcCC----Ee----cCHHHHHhCCCEEEECCCC
Confidence 4569999999 9999999999988887 899999987322111 11111 11 1356788999999987542
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCC
Q 018512 121 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV 162 (354)
Q Consensus 121 ~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv 162 (354)
+ ..+. .+.+....+.+++++++-+.
T Consensus 278 ~---------------~vI~--~~~~~~mK~GailiNvG~~d 302 (425)
T PRK05476 278 K---------------DVIT--AEHMEAMKDGAILANIGHFD 302 (425)
T ss_pred H---------------HHHH--HHHHhcCCCCCEEEEcCCCC
Confidence 2 1221 12223334678888887543
No 455
>PRK07589 ornithine cyclodeaminase; Validated
Probab=95.35 E-value=0.087 Score=51.37 Aligned_cols=74 Identities=18% Similarity=0.279 Sum_probs=51.9
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEE
Q 018512 39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVII 116 (354)
Q Consensus 39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi 116 (354)
+....+++|||+ |..+..-+..++.-..+.+|.++|++. .+..+.++.+. ...+.. ..+.++++++||+|+.
T Consensus 126 r~da~~l~iiGa-G~QA~~~l~a~~~vr~i~~V~v~~r~~~~a~~~~~~~~~~--~~~v~~---~~~~~~av~~ADIIvt 199 (346)
T PRK07589 126 RPDSRTMALIGN-GAQSEFQALAFKALLGIEEIRLYDIDPAATAKLARNLAGP--GLRIVA---CRSVAEAVEGADIITT 199 (346)
T ss_pred cCCCcEEEEECC-cHHHHHHHHHHHHhCCceEEEEEeCCHHHHHHHHHHHHhc--CCcEEE---eCCHHHHHhcCCEEEE
Confidence 445679999999 999888776555444567999999987 33444555542 123333 2467899999999998
Q ss_pred cC
Q 018512 117 PA 118 (354)
Q Consensus 117 ~a 118 (354)
+.
T Consensus 200 aT 201 (346)
T PRK07589 200 VT 201 (346)
T ss_pred ec
Confidence 64
No 456
>PRK07791 short chain dehydrogenase; Provisional
Probab=95.34 E-value=0.42 Score=44.89 Aligned_cols=34 Identities=29% Similarity=0.437 Sum_probs=30.1
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecC
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV 77 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~ 77 (354)
.+.+.|+||++.+|..++..|+..|. .|++.|.+
T Consensus 6 ~k~~lITGas~GIG~aia~~la~~G~--~vii~~~~ 39 (286)
T PRK07791 6 GRVVIVTGAGGGIGRAHALAFAAEGA--RVVVNDIG 39 (286)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--EEEEeeCC
Confidence 35899999999999999999999887 88888875
No 457
>PRK07411 hypothetical protein; Validated
Probab=95.31 E-value=0.16 Score=50.37 Aligned_cols=35 Identities=23% Similarity=0.433 Sum_probs=31.3
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 78 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~ 78 (354)
..||+|+|+ |.+|+.++..|+..|.. +|.|+|.+.
T Consensus 38 ~~~VlivG~-GGlG~~va~~La~~Gvg-~l~lvD~D~ 72 (390)
T PRK07411 38 AASVLCIGT-GGLGSPLLLYLAAAGIG-RIGIVDFDV 72 (390)
T ss_pred cCcEEEECC-CHHHHHHHHHHHHcCCC-EEEEECCCE
Confidence 348999999 99999999999999974 899999874
No 458
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.29 E-value=1.5 Score=40.47 Aligned_cols=35 Identities=26% Similarity=0.238 Sum_probs=28.7
Q ss_pred CCeEEEEcC--CCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512 42 GFKVAILGA--AGGIGQPLAMLMKINPLVSVLHLYDVVN 78 (354)
Q Consensus 42 ~~kI~IiGa--~G~vG~~~a~~l~~~~~~~ei~L~D~~~ 78 (354)
.+.+.|+|| ++.+|..++..|+..|. .|++.+++.
T Consensus 6 ~k~~lITGa~~~~GIG~a~a~~l~~~G~--~v~~~~~~~ 42 (261)
T PRK08690 6 GKKILITGMISERSIAYGIAKACREQGA--ELAFTYVVD 42 (261)
T ss_pred CcEEEEECCCCCCcHHHHHHHHHHHCCC--EEEEEcCcH
Confidence 357999996 46899999999999987 888877643
No 459
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.26 E-value=0.63 Score=43.41 Aligned_cols=150 Identities=13% Similarity=0.128 Sum_probs=78.9
Q ss_pred CeEEEEcCCC--chHHHHHHHHHhCCCCcEEEEEecCCc-hhHHHHHhcCCCCCeEEEEeCCCcH----------HhhhC
Q 018512 43 FKVAILGAAG--GIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFLGQPQL----------ENALT 109 (354)
Q Consensus 43 ~kI~IiGa~G--~vG~~~a~~l~~~~~~~ei~L~D~~~~-~g~~~dl~~~~~~~~v~~~~~~~d~----------~~al~ 109 (354)
+.+.|+||++ .+|..++..|+..|. .|++.|++.. .....++.+..... +-...+-+|. .+.+.
T Consensus 8 k~~lVTGas~~~GIG~aiA~~la~~Ga--~V~~~~r~~~~~~~~~~~~~~~g~~-~~~~~Dv~d~~~v~~~~~~~~~~~g 84 (271)
T PRK06505 8 KRGLIMGVANDHSIAWGIAKQLAAQGA--ELAFTYQGEALGKRVKPLAESLGSD-FVLPCDVEDIASVDAVFEALEKKWG 84 (271)
T ss_pred CEEEEeCCCCCCcHHHHHHHHHHhCCC--EEEEecCchHHHHHHHHHHHhcCCc-eEEeCCCCCHHHHHHHHHHHHHHhC
Confidence 4789999964 799999999999997 8999987642 11122232111001 1000011121 12235
Q ss_pred CCcEEEEcCCCCCCC-------CCCHH---HHHHHHHHHH----HHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHH
Q 018512 110 GMDLVIIPAGVPRKP-------GMTRD---DLFNINAGIV----RTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKK 175 (354)
Q Consensus 110 ~aDvVIi~ag~~~~~-------g~~r~---d~~~~n~~~~----~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~ 175 (354)
..|++|+.||..... ..+.. ..+..|+... +.+.+.|+ ..+.||++|......
T Consensus 85 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~---~~G~Iv~isS~~~~~---------- 151 (271)
T PRK06505 85 KLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMP---DGGSMLTLTYGGSTR---------- 151 (271)
T ss_pred CCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhc---cCceEEEEcCCCccc----------
Confidence 789999999864311 12222 2334454443 44444444 246666665432211
Q ss_pred hCCCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcc
Q 018512 176 AGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDV 212 (354)
Q Consensus 176 ~~~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~ 212 (354)
+.|..-.++.+.-.-..+.+.+|..++ +..|++
T Consensus 152 --~~~~~~~Y~asKaAl~~l~r~la~el~--~~gIrV 184 (271)
T PRK06505 152 --VMPNYNVMGVAKAALEASVRYLAADYG--PQGIRV 184 (271)
T ss_pred --cCCccchhhhhHHHHHHHHHHHHHHHh--hcCeEE
Confidence 233233455554444567777887763 444433
No 460
>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=95.25 E-value=0.048 Score=53.00 Aligned_cols=72 Identities=21% Similarity=0.380 Sum_probs=45.2
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCC-CcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPL-VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 119 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~-~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag 119 (354)
+++||+|+||+|++|.-++..|..+++ ..++.++-..+..|....+.. ..+... . .+. ++++++|+||++.+
T Consensus 3 ~~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~~~aG~~l~~~~----~~l~~~-~-~~~-~~~~~vD~vFla~p 75 (336)
T PRK05671 3 QPLDIAVVGATGTVGEALVQILEERDFPVGTLHLLASSESAGHSVPFAG----KNLRVR-E-VDS-FDFSQVQLAFFAAG 75 (336)
T ss_pred CCCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECcccCCCeeccCC----cceEEe-e-CCh-HHhcCCCEEEEcCC
Confidence 457999999999999999999987653 447777755432222222221 122221 1 122 34789999999754
No 461
>PRK06823 ornithine cyclodeaminase; Validated
Probab=95.24 E-value=0.13 Score=49.51 Aligned_cols=74 Identities=14% Similarity=0.108 Sum_probs=51.6
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEE
Q 018512 39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVII 116 (354)
Q Consensus 39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi 116 (354)
+....+++|||+ |..+..-+..+..-..+.+|.++|++.. +..+..+.+. ...+... .+.++++++||+|+.
T Consensus 125 ~~d~~~l~iiG~-G~qA~~~~~a~~~v~~i~~v~v~~r~~~~a~~~~~~~~~~--~~~v~~~---~~~~~av~~ADIV~t 198 (315)
T PRK06823 125 PQHVSAIGIVGT-GIQARMQLMYLKNVTDCRQLWVWGRSETALEEYRQYAQAL--GFAVNTT---LDAAEVAHAANLIVT 198 (315)
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhc--CCcEEEE---CCHHHHhcCCCEEEE
Confidence 445679999999 9998887777765555689999999872 3333333332 1234332 456899999999998
Q ss_pred cC
Q 018512 117 PA 118 (354)
Q Consensus 117 ~a 118 (354)
+.
T Consensus 199 aT 200 (315)
T PRK06823 199 TT 200 (315)
T ss_pred ec
Confidence 64
No 462
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=95.24 E-value=0.077 Score=47.33 Aligned_cols=78 Identities=21% Similarity=0.237 Sum_probs=51.4
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEE
Q 018512 39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVII 116 (354)
Q Consensus 39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi 116 (354)
+-...+|+|||.+..||..++.+|..++. .|.++|++.. +.....+.|.... .+. .+.++.+.++.||+||.
T Consensus 59 ~l~GK~vvVIGrS~iVGkPla~lL~~~~A--tVti~~~~~~~~~~~~~~~~hs~t~--~~~--~~~~l~~~~~~ADIVIs 132 (197)
T cd01079 59 RLYGKTITIINRSEVVGRPLAALLANDGA--RVYSVDINGIQVFTRGESIRHEKHH--VTD--EEAMTLDCLSQSDVVIT 132 (197)
T ss_pred CCCCCEEEEECCCccchHHHHHHHHHCCC--EEEEEecCccccccccccccccccc--ccc--hhhHHHHHhhhCCEEEE
Confidence 34567999999988999999999998886 8999998751 1000011111100 000 01126678899999999
Q ss_pred cCCCCC
Q 018512 117 PAGVPR 122 (354)
Q Consensus 117 ~ag~~~ 122 (354)
+.|.+.
T Consensus 133 AvG~~~ 138 (197)
T cd01079 133 GVPSPN 138 (197)
T ss_pred ccCCCC
Confidence 988763
No 463
>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase. This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli.
Probab=95.23 E-value=0.084 Score=54.42 Aligned_cols=65 Identities=22% Similarity=0.323 Sum_probs=46.9
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 118 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a 118 (354)
..++|.|+|. |.+|+.+|..|..-|. +|+.||.........++ . +.. ..++++.+++||+|++..
T Consensus 137 ~gktvgIiG~-G~IG~~vA~~l~~fG~--~V~~~d~~~~~~~~~~~---g----~~~---~~~l~ell~~aDvV~l~l 201 (525)
T TIGR01327 137 YGKTLGVIGL-GRIGSIVAKRAKAFGM--KVLAYDPYISPERAEQL---G----VEL---VDDLDELLARADFITVHT 201 (525)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC--EEEEECCCCChhHHHhc---C----CEE---cCCHHHHHhhCCEEEEcc
Confidence 4569999999 9999999999987676 99999975322111111 1 111 135788999999999974
No 464
>PLN02383 aspartate semialdehyde dehydrogenase
Probab=95.22 E-value=0.045 Score=53.32 Aligned_cols=71 Identities=23% Similarity=0.390 Sum_probs=45.3
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCC-CcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPL-VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 119 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~-~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag 119 (354)
++||+|+||+|.+|..+...|..+++ ..++..+......|...+.. . ..+... ..+ .+++.++|+||++++
T Consensus 7 ~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsaGk~~~~~--~--~~~~v~--~~~-~~~~~~~D~vf~a~p 78 (344)
T PLN02383 7 GPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSAGKKVTFE--G--RDYTVE--ELT-EDSFDGVDIALFSAG 78 (344)
T ss_pred CCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCCCCCeeeec--C--ceeEEE--eCC-HHHHcCCCEEEECCC
Confidence 47999999999999999998887653 45776665543222222111 1 122221 123 356799999999865
No 465
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=95.20 E-value=0.19 Score=44.92 Aligned_cols=35 Identities=17% Similarity=0.391 Sum_probs=30.9
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 78 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~ 78 (354)
..||+|+|+ |.+|+.++..|+..|. .+++++|.+.
T Consensus 21 ~s~VlIiG~-gglG~evak~La~~GV-g~i~lvD~d~ 55 (197)
T cd01492 21 SARILLIGL-KGLGAEIAKNLVLSGI-GSLTILDDRT 55 (197)
T ss_pred hCcEEEEcC-CHHHHHHHHHHHHcCC-CEEEEEECCc
Confidence 458999999 8899999999999997 4899999874
No 466
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=95.19 E-value=0.28 Score=46.81 Aligned_cols=113 Identities=13% Similarity=0.057 Sum_probs=64.4
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCC-CCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEE-eCCCc---HHhh-------h
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINP-LVSVLHLYDVVNT--PGVTADISHMDTGAVVRGF-LGQPQ---LENA-------L 108 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~-~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~-~~~~d---~~~a-------l 108 (354)
+.+.|+||++.+|..++..|+..| . .|++.+++.. .....++.... ..+..+ .+-++ .+++ +
T Consensus 4 k~vlITGas~GIG~aia~~L~~~G~~--~V~l~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 79 (314)
T TIGR01289 4 PTVIITGASSGLGLYAAKALAATGEW--HVIMACRDFLKAEQAAKSLGMPK--DSYTIMHLDLGSLDSVRQFVQQFRESG 79 (314)
T ss_pred CEEEEECCCChHHHHHHHHHHHcCCC--EEEEEeCCHHHHHHHHHHhcCCC--CeEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence 378999999999999999999888 6 8999988752 22222332111 112211 11112 1111 3
Q ss_pred CCCcEEEEcCCCCCCC----CCCHH---HHHHHHH----HHHHHHHHHHhhhCC-CeEEEEec
Q 018512 109 TGMDLVIIPAGVPRKP----GMTRD---DLFNINA----GIVRTLCEGIAKCCP-NATVNLIS 159 (354)
Q Consensus 109 ~~aDvVIi~ag~~~~~----g~~r~---d~~~~n~----~~~~~i~~~i~~~~p-~a~viv~t 159 (354)
...|++|+.||..... ..+.. ..+.-|+ ..++.+.+.+++... .+.||++|
T Consensus 80 ~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vs 142 (314)
T TIGR01289 80 RPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVG 142 (314)
T ss_pred CCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEe
Confidence 4689999999863221 12222 2334454 446666777765432 35566654
No 467
>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=95.18 E-value=0.082 Score=54.53 Aligned_cols=92 Identities=23% Similarity=0.329 Sum_probs=58.7
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCC
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV 120 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~ 120 (354)
..++|.|+|. |.+|+.+|..+..-|. +|+.||.........+ .. +... ++++.++.||+|++....
T Consensus 139 ~gktvgIiG~-G~IG~~vA~~l~~fG~--~V~~~d~~~~~~~~~~---~g----~~~~----~l~ell~~aDiV~l~lP~ 204 (526)
T PRK13581 139 YGKTLGIIGL-GRIGSEVAKRAKAFGM--KVIAYDPYISPERAAQ---LG----VELV----SLDELLARADFITLHTPL 204 (526)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC--EEEEECCCCChhHHHh---cC----CEEE----cHHHHHhhCCEEEEccCC
Confidence 4569999999 9999999999987776 9999998542211111 11 1211 467889999999997532
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512 121 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 159 (354)
Q Consensus 121 ~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t 159 (354)
.. .+..++. .+.+....|++++|+++
T Consensus 205 t~-----------~t~~li~--~~~l~~mk~ga~lIN~a 230 (526)
T PRK13581 205 TP-----------ETRGLIG--AEELAKMKPGVRIINCA 230 (526)
T ss_pred Ch-----------HhhcCcC--HHHHhcCCCCeEEEECC
Confidence 21 1111110 12333334788888886
No 468
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=95.15 E-value=0.11 Score=44.99 Aligned_cols=58 Identities=26% Similarity=0.435 Sum_probs=42.3
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512 39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 118 (354)
Q Consensus 39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a 118 (354)
+-+.++|+|||.+..||..++.+|..++. .+.+.+.+ |.++++.++.||+||.++
T Consensus 33 ~l~Gk~v~VvGrs~~VG~Pla~lL~~~~a--tVt~~h~~-----------------------T~~l~~~~~~ADIVVsa~ 87 (160)
T PF02882_consen 33 DLEGKKVVVVGRSNIVGKPLAMLLLNKGA--TVTICHSK-----------------------TKNLQEITRRADIVVSAV 87 (160)
T ss_dssp STTT-EEEEE-TTTTTHHHHHHHHHHTT---EEEEE-TT-----------------------SSSHHHHHTTSSEEEE-S
T ss_pred CCCCCEEEEECCcCCCChHHHHHHHhCCC--eEEeccCC-----------------------CCcccceeeeccEEeeee
Confidence 34567999999988899999999998876 66666643 235677789999999998
Q ss_pred CCC
Q 018512 119 GVP 121 (354)
Q Consensus 119 g~~ 121 (354)
|.|
T Consensus 88 G~~ 90 (160)
T PF02882_consen 88 GKP 90 (160)
T ss_dssp SST
T ss_pred ccc
Confidence 876
No 469
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=95.15 E-value=0.13 Score=52.73 Aligned_cols=107 Identities=15% Similarity=0.170 Sum_probs=65.0
Q ss_pred CCCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC-chhHHHHHhcCCCCCeEEEE-----------eCCCcH-
Q 018512 38 GGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGF-----------LGQPQL- 104 (354)
Q Consensus 38 ~~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~-~~g~~~dl~~~~~~~~v~~~-----------~~~~d~- 104 (354)
+..++.||+|+|+ |.+|...+..+...|. +|+.+|.++ ...++..+.-- ...+... ..+.++
T Consensus 161 G~~pg~kVlViGa-G~iGL~Ai~~Ak~lGA--~V~a~D~~~~rle~aeslGA~--~v~i~~~e~~~~~~gya~~~s~~~~ 235 (509)
T PRK09424 161 GKVPPAKVLVIGA-GVAGLAAIGAAGSLGA--IVRAFDTRPEVAEQVESMGAE--FLELDFEEEGGSGDGYAKVMSEEFI 235 (509)
T ss_pred CCcCCCEEEEECC-cHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHcCCe--EEEeccccccccccchhhhcchhHH
Confidence 4666789999999 9999999888888886 799999987 33333332210 0001000 001121
Q ss_pred -------HhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCC
Q 018512 105 -------ENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP 161 (354)
Q Consensus 105 -------~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNP 161 (354)
.+.++++|+||.+++.|.+.... -+.++..+.++ |.+.|+.++.+
T Consensus 236 ~~~~~~~~~~~~gaDVVIetag~pg~~aP~---------lit~~~v~~mk---pGgvIVdvg~~ 287 (509)
T PRK09424 236 KAEMALFAEQAKEVDIIITTALIPGKPAPK---------LITAEMVASMK---PGSVIVDLAAE 287 (509)
T ss_pred HHHHHHHHhccCCCCEEEECCCCCcccCcc---------hHHHHHHHhcC---CCCEEEEEccC
Confidence 12236899999999987532110 11244455444 78888777764
No 470
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=95.14 E-value=0.17 Score=42.84 Aligned_cols=115 Identities=18% Similarity=0.177 Sum_probs=70.9
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC----chhHHHHHhcCCCCCeEEEEeC-CCcH----------Hhhh
Q 018512 44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN----TPGVTADISHMDTGAVVRGFLG-QPQL----------ENAL 108 (354)
Q Consensus 44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~----~~g~~~dl~~~~~~~~v~~~~~-~~d~----------~~al 108 (354)
.+.|+||+|.+|..++..|+..+. ..|+++++++ ......++.... ..+..+.. ..+. .+..
T Consensus 2 ~~lItGa~~giG~~~a~~l~~~g~-~~v~~~~r~~~~~~~~~l~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (167)
T PF00106_consen 2 TVLITGASSGIGRALARALARRGA-RVVILTSRSEDSEGAQELIQELKAPG--AKITFIECDLSDPESIRALIEEVIKRF 78 (167)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTT-EEEEEEESSCHHHHHHHHHHHHHHTT--SEEEEEESETTSHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHhcCc-eEEEEeeecccccccccccccccccc--ccccccccccccccccccccccccccc
Confidence 588999999999999999999843 2788888872 222233344222 23333211 1111 2334
Q ss_pred CCCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCC
Q 018512 109 TGMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV 162 (354)
Q Consensus 109 ~~aDvVIi~ag~~~~~g---~~---r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv 162 (354)
...|++|.++|...... ++ ....+..|+.....+.+.+.. .+.+.|+++|...
T Consensus 79 ~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~-~~~g~iv~~sS~~ 137 (167)
T PF00106_consen 79 GPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP-QGGGKIVNISSIA 137 (167)
T ss_dssp SSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH-HTTEEEEEEEEGG
T ss_pred ccccccccccccccccccccccchhhhhccccccceeeeeeehhee-ccccceEEecchh
Confidence 68999999998765221 11 224556676666667777766 4577777776433
No 471
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.14 E-value=0.25 Score=45.42 Aligned_cols=34 Identities=12% Similarity=0.113 Sum_probs=28.0
Q ss_pred CCCeEEEEcCCC--chHHHHHHHHHhCCCCcEEEEEec
Q 018512 41 AGFKVAILGAAG--GIGQPLAMLMKINPLVSVLHLYDV 76 (354)
Q Consensus 41 ~~~kI~IiGa~G--~vG~~~a~~l~~~~~~~ei~L~D~ 76 (354)
+.++|.|+||+| .+|..++..|+..|. .|++.++
T Consensus 5 ~~k~vlVtGas~~~giG~~~a~~l~~~G~--~vi~~~~ 40 (256)
T PRK12859 5 KNKVAVVTGVSRLDGIGAAICKELAEAGA--DIFFTYW 40 (256)
T ss_pred CCcEEEEECCCCCCChHHHHHHHHHHCCC--eEEEEec
Confidence 345899999964 799999999999887 7887753
No 472
>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=95.14 E-value=0.081 Score=50.96 Aligned_cols=73 Identities=26% Similarity=0.381 Sum_probs=46.9
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCC-CCcEEEEEecCCchhHH-HHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINP-LVSVLHLYDVVNTPGVT-ADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 119 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~-~~~ei~L~D~~~~~g~~-~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag 119 (354)
++||+|+||+|.||+.+...|..+. .+.++.++-.....|.. .++..-.. .+.. ...| ...++++|+|++++|
T Consensus 1 ~~~VavvGATG~VG~~~~~~L~e~~f~~~~~~~~AS~rSaG~~~~~f~~~~~--~v~~--~~~~-~~~~~~~Divf~~ag 75 (334)
T COG0136 1 KLNVAVLGATGAVGQVLLELLEERHFPFEELVLLASARSAGKKYIEFGGKSI--GVPE--DAAD-EFVFSDVDIVFFAAG 75 (334)
T ss_pred CcEEEEEeccchHHHHHHHHHHhcCCCcceEEEEecccccCCccccccCccc--cCcc--cccc-ccccccCCEEEEeCc
Confidence 4699999999999999999999854 56667777765533332 32222110 0110 0123 245679999999976
No 473
>KOG0409 consensus Predicted dehydrogenase [General function prediction only]
Probab=95.13 E-value=0.082 Score=50.02 Aligned_cols=68 Identities=15% Similarity=0.245 Sum_probs=51.7
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCCC
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP 121 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~~ 121 (354)
.++|..||- |.+|++.+..|+..|+ .|+.||++. ....++.+... .+. ..+.|..+++|+||...+.|
T Consensus 35 ~~~iGFIGL-G~MG~~M~~nLik~G~--kVtV~dr~~--~k~~~f~~~Ga--~v~-----~sPaeVae~sDvvitmv~~~ 102 (327)
T KOG0409|consen 35 KTRIGFIGL-GNMGSAMVSNLIKAGY--KVTVYDRTK--DKCKEFQEAGA--RVA-----NSPAEVAEDSDVVITMVPNP 102 (327)
T ss_pred cceeeEEee-ccchHHHHHHHHHcCC--EEEEEeCcH--HHHHHHHHhch--hhh-----CCHHHHHhhcCEEEEEcCCh
Confidence 579999999 9999999999999999 999999865 23345555432 121 23467789999999976543
No 474
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=95.12 E-value=0.055 Score=49.80 Aligned_cols=72 Identities=17% Similarity=0.159 Sum_probs=49.5
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEE--EeCCCcHHhhhCCCcEEEEcCCC
Q 018512 43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG--FLGQPQLENALTGMDLVIIPAGV 120 (354)
Q Consensus 43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~--~~~~~d~~~al~~aDvVIi~ag~ 120 (354)
|+|.|+||+|++|++++..|+..+. +|+..-++....... . . ...+.. +.....+..+++|.|.++++.+.
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~~--~v~~~~r~~~~~~~~--~-~--~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~~ 73 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARGH--EVRAAVRNPEAAAAL--A-G--GVEVVLGDLRDPKSLVAGAKGVDGVLLISGL 73 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCCC--EEEEEEeCHHHHHhh--c-C--CcEEEEeccCCHhHHHHHhccccEEEEEecc
Confidence 6899999999999999999998876 777777665222222 2 1 112211 22234567889999999998654
Q ss_pred C
Q 018512 121 P 121 (354)
Q Consensus 121 ~ 121 (354)
.
T Consensus 74 ~ 74 (275)
T COG0702 74 L 74 (275)
T ss_pred c
Confidence 4
No 475
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=95.11 E-value=0.38 Score=40.38 Aligned_cols=112 Identities=24% Similarity=0.210 Sum_probs=63.7
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhH---HHHHhcCCCCCeEEEEe-CCCc---HHhhh------
Q 018512 44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGV---TADISHMDTGAVVRGFL-GQPQ---LENAL------ 108 (354)
Q Consensus 44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~---~~dl~~~~~~~~v~~~~-~~~d---~~~al------ 108 (354)
++.|+||+|.+|.+++..|..++. ..+++.++++ .... ..++.... ..+..+. +-++ +.+.+
T Consensus 2 ~~li~Ga~~~iG~~~~~~l~~~g~-~~v~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 78 (180)
T smart00822 2 TYLITGGLGGLGLELARWLAERGA-RHLVLLSRSGPDAPGAAELLAELEALG--AEVTVVACDVADRAALAAALAAIPAR 78 (180)
T ss_pred EEEEEcCCChHHHHHHHHHHHhhC-CeEEEEeCCCCCCccHHHHHHHHHhcC--CeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 689999999999999999988774 1566676654 1111 12333221 2222211 1111 12222
Q ss_pred -CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512 109 -TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 159 (354)
Q Consensus 109 -~~aDvVIi~ag~~~~~---g~~---r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t 159 (354)
...|.||+.+|..... ..+ ....+..|+.....+.+.+.+..+. .++++|
T Consensus 79 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~ii~~s 135 (180)
T smart00822 79 LGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLD-FFVLFS 135 (180)
T ss_pred cCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcc-eEEEEc
Confidence 3359999998854211 111 2334667888888888888655444 444444
No 476
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=95.11 E-value=0.37 Score=55.24 Aligned_cols=120 Identities=11% Similarity=0.000 Sum_probs=71.5
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCC--CCcEEEEEecCCchh-HHHHHhc----CC-----CCCeEEEEeC-------
Q 018512 40 AAGFKVAILGAAGGIGQPLAMLMKINP--LVSVLHLYDVVNTPG-VTADISH----MD-----TGAVVRGFLG------- 100 (354)
Q Consensus 40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~--~~~ei~L~D~~~~~g-~~~dl~~----~~-----~~~~v~~~~~------- 100 (354)
..+++|.|+||+|++|++++..|+..+ ...+|+...+..... ....+.+ .. ...++..+.+
T Consensus 969 ~~~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~l 1048 (1389)
T TIGR03443 969 STPITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKF 1048 (1389)
T ss_pred CCCceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccC
Confidence 345799999999999999999888766 333666665543111 1111111 00 0012222211
Q ss_pred ---CCcHHhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecC
Q 018512 101 ---QPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN 160 (354)
Q Consensus 101 ---~~d~~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tN 160 (354)
...+.+...++|+||++|+... ......++...|+....++++.+.+...+.++.+.|.
T Consensus 1049 gl~~~~~~~l~~~~d~iiH~Aa~~~-~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~ 1110 (1389)
T TIGR03443 1049 GLSDEKWSDLTNEVDVIIHNGALVH-WVYPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSST 1110 (1389)
T ss_pred CcCHHHHHHHHhcCCEEEECCcEec-CccCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCe
Confidence 1123445578999999987543 2223444445799999999999887655555555554
No 477
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=95.10 E-value=0.33 Score=44.79 Aligned_cols=153 Identities=14% Similarity=0.199 Sum_probs=78.4
Q ss_pred CeEEEEcCC--CchHHHHHHHHHhCCCCcEEEEEecCCc----hhHHHHHhcCCCCCe-EEE-EeCCCcHH-------hh
Q 018512 43 FKVAILGAA--GGIGQPLAMLMKINPLVSVLHLYDVVNT----PGVTADISHMDTGAV-VRG-FLGQPQLE-------NA 107 (354)
Q Consensus 43 ~kI~IiGa~--G~vG~~~a~~l~~~~~~~ei~L~D~~~~----~g~~~dl~~~~~~~~-v~~-~~~~~d~~-------~a 107 (354)
+.+.|+||+ +.+|..++..|+..|. +|++.+.+.. .....++........ +.. .....+.. +.
T Consensus 7 k~~lItGas~~~GIG~aia~~la~~G~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 84 (258)
T PRK07370 7 KKALVTGIANNRSIAWGIAQQLHAAGA--ELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK 84 (258)
T ss_pred cEEEEeCCCCCCchHHHHHHHHHHCCC--EEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence 478999985 5899999999999888 7887765431 112223322111110 110 11111111 22
Q ss_pred hCCCcEEEEcCCCCCC---CC----CCHH---HHHHHHH----HHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHH
Q 018512 108 LTGMDLVIIPAGVPRK---PG----MTRD---DLFNINA----GIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVF 173 (354)
Q Consensus 108 l~~aDvVIi~ag~~~~---~g----~~r~---d~~~~n~----~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~ 173 (354)
+...|++|+.+|.... .+ .+.. ..+..|+ ...+.+.+.+++ .+.|+++|......
T Consensus 85 ~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~---~g~Iv~isS~~~~~-------- 153 (258)
T PRK07370 85 WGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE---GGSIVTLTYLGGVR-------- 153 (258)
T ss_pred cCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh---CCeEEEEecccccc--------
Confidence 3468999999986431 11 1222 2233343 344555555543 46677666432211
Q ss_pred HHhCCCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceE
Q 018512 174 KKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPV 214 (354)
Q Consensus 174 ~~~~~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v 214 (354)
+.|..-.++.+.-.-..+.+.++..++ +..|++..
T Consensus 154 ----~~~~~~~Y~asKaal~~l~~~la~el~--~~gI~Vn~ 188 (258)
T PRK07370 154 ----AIPNYNVMGVAKAALEASVRYLAAELG--PKNIRVNA 188 (258)
T ss_pred ----CCcccchhhHHHHHHHHHHHHHHHHhC--cCCeEEEE
Confidence 233333455544444556777777764 44554433
No 478
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=95.09 E-value=0.079 Score=52.18 Aligned_cols=78 Identities=19% Similarity=0.244 Sum_probs=51.7
Q ss_pred CCCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEE-EeCCCcHHhhhCCCcEEEE
Q 018512 38 GGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENALTGMDLVII 116 (354)
Q Consensus 38 ~~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~~~d~~~al~~aDvVIi 116 (354)
++.++.||+|+|+ |.+|...+..+...|. +|..+|++.... ..+.... ...+.. .....++.+.++++|+||.
T Consensus 163 ~~l~~~~VlViGa-G~vG~~aa~~a~~lGa--~V~v~d~~~~~~--~~l~~~~-g~~v~~~~~~~~~l~~~l~~aDvVI~ 236 (370)
T TIGR00518 163 PGVEPGDVTIIGG-GVVGTNAAKMANGLGA--TVTILDINIDRL--RQLDAEF-GGRIHTRYSNAYEIEDAVKRADLLIG 236 (370)
T ss_pred CCCCCceEEEEcC-CHHHHHHHHHHHHCCC--eEEEEECCHHHH--HHHHHhc-CceeEeccCCHHHHHHHHccCCEEEE
Confidence 4456678999999 9999999999988886 799999875221 1122111 111111 1112346678899999999
Q ss_pred cCCCC
Q 018512 117 PAGVP 121 (354)
Q Consensus 117 ~ag~~ 121 (354)
+.+.+
T Consensus 237 a~~~~ 241 (370)
T TIGR00518 237 AVLIP 241 (370)
T ss_pred ccccC
Confidence 87554
No 479
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.08 E-value=0.36 Score=45.09 Aligned_cols=158 Identities=15% Similarity=0.164 Sum_probs=81.5
Q ss_pred CCeEEEEcCC--CchHHHHHHHHHhCCCCcEEEEEecCC-chhHHHHHhcC-CCCCeEEE-EeCCCcH-------HhhhC
Q 018512 42 GFKVAILGAA--GGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHM-DTGAVVRG-FLGQPQL-------ENALT 109 (354)
Q Consensus 42 ~~kI~IiGa~--G~vG~~~a~~l~~~~~~~ei~L~D~~~-~~g~~~dl~~~-~~~~~v~~-~~~~~d~-------~~al~ 109 (354)
.+++.|+||+ +-+|..++..|+..|. .|++.++++ ......++... .....+.. .....+. .+.+.
T Consensus 10 ~k~~lItGas~~~GIG~aia~~la~~G~--~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 87 (272)
T PRK08159 10 GKRGLILGVANNRSIAWGIAKACRAAGA--ELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKWG 87 (272)
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCC--EEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhcC
Confidence 3479999995 5799999999999998 888887653 12222222211 11000111 0011111 12234
Q ss_pred CCcEEEEcCCCCCC-----C--CCCH---HHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHhCC
Q 018512 110 GMDLVIIPAGVPRK-----P--GMTR---DDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGT 178 (354)
Q Consensus 110 ~aDvVIi~ag~~~~-----~--g~~r---~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~~~ 178 (354)
..|++|+.||.... + ..+. ...+.-|+.....+++.+...- ..+.|+++|...... +
T Consensus 88 ~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~------------~ 155 (272)
T PRK08159 88 KLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEK------------V 155 (272)
T ss_pred CCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEecccccc------------C
Confidence 68999999986421 1 1222 2344556654445554443322 246666665322111 2
Q ss_pred CCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512 179 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV 215 (354)
Q Consensus 179 ~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~ 215 (354)
.|..-.++.+.-....+.+.++..+. +..|++..+
T Consensus 156 ~p~~~~Y~asKaal~~l~~~la~el~--~~gIrVn~v 190 (272)
T PRK08159 156 MPHYNVMGVAKAALEASVKYLAVDLG--PKNIRVNAI 190 (272)
T ss_pred CCcchhhhhHHHHHHHHHHHHHHHhc--ccCeEEEEe
Confidence 33333455554445566677777764 444544333
No 480
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.08 E-value=0.96 Score=41.70 Aligned_cols=148 Identities=13% Similarity=0.092 Sum_probs=75.1
Q ss_pred CeEEEEcCC--CchHHHHHHHHHhCCCCcEEEEEecCC-chhHHHHHhcCCCCCeEEEE-eCCCc---H-------Hhhh
Q 018512 43 FKVAILGAA--GGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGF-LGQPQ---L-------ENAL 108 (354)
Q Consensus 43 ~kI~IiGa~--G~vG~~~a~~l~~~~~~~ei~L~D~~~-~~g~~~dl~~~~~~~~v~~~-~~~~d---~-------~~al 108 (354)
+.+.|+||+ +.+|..++..|+..|. .|++.+++. ......++.+......+..+ .+-+| . .+.+
T Consensus 8 k~~lItGa~~s~GIG~aia~~la~~G~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 85 (257)
T PRK08594 8 KTYVVMGVANKRSIAWGIARSLHNAGA--KLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEV 85 (257)
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHCCC--EEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhC
Confidence 478999996 6899999999999987 888887653 11111222211001111111 01111 1 1223
Q ss_pred CCCcEEEEcCCCCCC---C----CCCHHH---HHHHHHHHHHHHHHHHhhh-CCCeEEEEecCCCCCchHHHHHHHHHhC
Q 018512 109 TGMDLVIIPAGVPRK---P----GMTRDD---LFNINAGIVRTLCEGIAKC-CPNATVNLISNPVNSTVPIAAEVFKKAG 177 (354)
Q Consensus 109 ~~aDvVIi~ag~~~~---~----g~~r~d---~~~~n~~~~~~i~~~i~~~-~p~a~viv~tNPv~~~~~~~~~~~~~~~ 177 (354)
...|++|+.+|.... . ..+..+ .+.-|+.....+.+.+..+ .+.+.|+++|.-....
T Consensus 86 g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~------------ 153 (257)
T PRK08594 86 GVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGER------------ 153 (257)
T ss_pred CCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCcc------------
Confidence 558999999886421 1 122222 2233444333333333322 1356777776433221
Q ss_pred CCCCCCEEEeccchHHHHHHHHHHHhC
Q 018512 178 TYDPKKLLGVTMLDVVRANTFVAEVLG 204 (354)
Q Consensus 178 ~~p~~kviG~t~ld~~r~~~~la~~l~ 204 (354)
+.|..-.++.+...-..|.+.+|..+.
T Consensus 154 ~~~~~~~Y~asKaal~~l~~~la~el~ 180 (257)
T PRK08594 154 VVQNYNVMGVAKASLEASVKYLANDLG 180 (257)
T ss_pred CCCCCchhHHHHHHHHHHHHHHHHHhh
Confidence 122222345554444566777777664
No 481
>PRK13529 malate dehydrogenase; Provisional
Probab=95.06 E-value=0.22 Score=51.25 Aligned_cols=125 Identities=18% Similarity=0.264 Sum_probs=79.9
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHh----CCCC-----cEEEEEecCC--ch------hHHHHHhcCCCCCeEEEE---eC
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKI----NPLV-----SVLHLYDVVN--TP------GVTADISHMDTGAVVRGF---LG 100 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~----~~~~-----~ei~L~D~~~--~~------g~~~dl~~~~~~~~v~~~---~~ 100 (354)
...||++.|| |..|..+|.+|+. .|+. ..++++|.+. .. .....+.+.. ...... ..
T Consensus 294 ~d~riv~~GA-GsAgiGia~ll~~~~~~~Gl~~eeA~~~i~~vD~~GLl~~~r~~l~~~k~~fa~~~--~~~~~~~~~~~ 370 (563)
T PRK13529 294 SDQRIVFLGA-GSAGCGIADQIVAAMVREGLSEEEARKRFFMVDRQGLLTDDMPDLLDFQKPYARKR--EELADWDTEGD 370 (563)
T ss_pred hhcEEEEECC-CHHHHHHHHHHHHHHHHcCCChhHhcCeEEEEcCCCeEeCCCCcchHHHHHHhhhc--ccccccccccC
Confidence 3469999999 9999999988875 4653 5899999875 11 1111122211 111000 11
Q ss_pred CCcHHhhhCCC--cEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCC--CchHHHHHHHHHh
Q 018512 101 QPQLENALTGM--DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN--STVPIAAEVFKKA 176 (354)
Q Consensus 101 ~~d~~~al~~a--DvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~--~~~~~~~~~~~~~ 176 (354)
..++.++++++ |++|=+.+.+. -+.+++++.|.+++++.+|+-.|||.. -.++ +-..+.
T Consensus 371 ~~~L~e~v~~~kPtvLIG~S~~~g--------------~Ft~evv~~Ma~~~erPIIFaLSNPt~~aE~tp---e~a~~~ 433 (563)
T PRK13529 371 VISLLEVVRNVKPTVLIGVSGQPG--------------AFTEEIVKEMAAHCERPIIFPLSNPTSRAEATP---EDLIAW 433 (563)
T ss_pred CCCHHHHHhccCCCEEEEecCCCC--------------CCCHHHHHHHHhcCCCCEEEECCCcCCCcccCH---HHHHHh
Confidence 24789999999 99887655442 144678889999999999999999987 4443 222332
Q ss_pred CCCCCCCEEEe
Q 018512 177 GTYDPKKLLGV 187 (354)
Q Consensus 177 ~~~p~~kviG~ 187 (354)
+ ..+-+++.
T Consensus 434 T--~Grai~At 442 (563)
T PRK13529 434 T--DGRALVAT 442 (563)
T ss_pred h--cCCEEEEE
Confidence 2 12457777
No 482
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=95.03 E-value=0.13 Score=50.68 Aligned_cols=36 Identities=25% Similarity=0.393 Sum_probs=31.5
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 78 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~ 78 (354)
+..||+|+|+ |.+|+.++..|+..|.. +|+++|.+.
T Consensus 40 ~~~~VliiG~-GglG~~v~~~La~~Gvg-~i~ivD~D~ 75 (370)
T PRK05600 40 HNARVLVIGA-GGLGCPAMQSLASAGVG-TITLIDDDT 75 (370)
T ss_pred cCCcEEEECC-CHHHHHHHHHHHHcCCC-EEEEEeCCE
Confidence 3458999999 99999999999998864 899999884
No 483
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=94.99 E-value=0.072 Score=50.65 Aligned_cols=104 Identities=25% Similarity=0.262 Sum_probs=65.0
Q ss_pred chhHHHHHHHHHHhccCCCcccchhhhhhhhcccC------CCCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEec
Q 018512 3 FSSEANQRIARISAHLYPPNLQENSCLRQAKCRAK------GGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDV 76 (354)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~ 76 (354)
-||+-+.|++...+..| ..+.|...- .+-++-||+|||+ |.+|.+-|.... ++..+|..+|.
T Consensus 132 PMSeVAGrla~q~Ga~~---------lek~~GG~GvllgGvpGV~~~kv~iiGG-GvvgtnaAkiA~--glgA~Vtild~ 199 (371)
T COG0686 132 PMSEVAGRLAAQAGAYY---------LEKTNGGKGVLLGGVPGVLPAKVVVLGG-GVVGTNAAKIAI--GLGADVTILDL 199 (371)
T ss_pred hHHHHhhhHHHHHHHHH---------HHhccCCceeEecCCCCCCCccEEEECC-ccccchHHHHHh--ccCCeeEEEec
Confidence 47788888777666553 222222221 2556679999999 999999887666 44448999999
Q ss_pred CCchhHHHHHhcCCCCCeEEE-EeCCCcHHhhhCCCcEEEEcCCCC
Q 018512 77 VNTPGVTADISHMDTGAVVRG-FLGQPQLENALTGMDLVIIPAGVP 121 (354)
Q Consensus 77 ~~~~g~~~dl~~~~~~~~v~~-~~~~~d~~~al~~aDvVIi~ag~~ 121 (354)
+..+-..+|-. +..++.. .+...+++++++.+|+||-+.-.|
T Consensus 200 n~~rl~~ldd~---f~~rv~~~~st~~~iee~v~~aDlvIgaVLIp 242 (371)
T COG0686 200 NIDRLRQLDDL---FGGRVHTLYSTPSNIEEAVKKADLVIGAVLIP 242 (371)
T ss_pred CHHHHhhhhHh---hCceeEEEEcCHHHHHHHhhhccEEEEEEEec
Confidence 85221112111 1233333 223357889999999999864333
No 484
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.98 E-value=0.23 Score=50.35 Aligned_cols=124 Identities=15% Similarity=0.116 Sum_probs=67.1
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc-h--hHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-P--GVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 118 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~-~--g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a 118 (354)
..+|+|+|+ |.+|..+|..|...|. +|+++|..+. . .....+.... +....++ .. +...++|+||++.
T Consensus 16 ~~~v~viG~-G~~G~~~A~~L~~~G~--~V~~~d~~~~~~~~~~~~~l~~~g----v~~~~~~-~~-~~~~~~D~Vv~s~ 86 (480)
T PRK01438 16 GLRVVVAGL-GVSGFAAADALLELGA--RVTVVDDGDDERHRALAAILEALG----ATVRLGP-GP-TLPEDTDLVVTSP 86 (480)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCC--EEEEEeCCchhhhHHHHHHHHHcC----CEEEECC-Cc-cccCCCCEEEECC
Confidence 348999999 9999999999988887 8999997651 1 1122243322 2222222 11 2356799999998
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHH--HHHHHhhhCCCeEEEEecCCCC--CchHHHHHHHHH
Q 018512 119 GVPRKPGMTRDDLFNINAGIVRT--LCEGIAKCCPNATVNLISNPVN--STVPIAAEVFKK 175 (354)
Q Consensus 119 g~~~~~g~~r~d~~~~n~~~~~~--i~~~i~~~~p~a~viv~tNPv~--~~~~~~~~~~~~ 175 (354)
|.+..... .......+++++.+ ++-.+.+...+..+|-+|=..+ ..+.+++.++..
T Consensus 87 Gi~~~~~~-~~~a~~~gi~v~~~~e~~~~~~~~~~~~~~I~VTGTnGKTTTt~mi~~iL~~ 146 (480)
T PRK01438 87 GWRPDAPL-LAAAADAGIPVWGEVELAWRLRDPDRPAPWLAVTGTNGKTTTVQMLASMLRA 146 (480)
T ss_pred CcCCCCHH-HHHHHHCCCeecchHHHHHHhhhccCCCCEEEEeCCCcHHHHHHHHHHHHHH
Confidence 87643211 01112234444432 2222221112334566654444 455555555544
No 485
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=94.94 E-value=0.3 Score=45.94 Aligned_cols=36 Identities=22% Similarity=0.382 Sum_probs=31.4
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 78 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~ 78 (354)
+..+|+|+|+ |.||+.++..|+..|.. +|.|+|.+.
T Consensus 29 ~~s~VlVvG~-GGVGs~vae~Lar~GVg-~itLiD~D~ 64 (268)
T PRK15116 29 ADAHICVVGI-GGVGSWAAEALARTGIG-AITLIDMDD 64 (268)
T ss_pred cCCCEEEECc-CHHHHHHHHHHHHcCCC-EEEEEeCCE
Confidence 3448999999 99999999999999864 899999874
No 486
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=94.92 E-value=0.17 Score=49.95 Aligned_cols=35 Identities=29% Similarity=0.495 Sum_probs=31.1
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecC
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV 77 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~ 77 (354)
+..||+|+|+ |.+|+.++..|+..|.. +|.|+|.+
T Consensus 134 ~~~~VlvvG~-GG~Gs~ia~~La~~Gvg-~i~lvD~d 168 (376)
T PRK08762 134 LEARVLLIGA-GGLGSPAALYLAAAGVG-TLGIVDHD 168 (376)
T ss_pred hcCcEEEECC-CHHHHHHHHHHHHcCCC-eEEEEeCC
Confidence 3458999999 99999999999998864 89999997
No 487
>PRK06199 ornithine cyclodeaminase; Validated
Probab=94.92 E-value=0.14 Score=50.64 Aligned_cols=76 Identities=14% Similarity=0.173 Sum_probs=52.9
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHHh-CCCCcEEEEEecCC--chhHHHHHhcCC-CCCeEEEEeCCCcHHhhhCCCcEE
Q 018512 39 GAAGFKVAILGAAGGIGQPLAMLMKI-NPLVSVLHLYDVVN--TPGVTADISHMD-TGAVVRGFLGQPQLENALTGMDLV 114 (354)
Q Consensus 39 ~~~~~kI~IiGa~G~vG~~~a~~l~~-~~~~~ei~L~D~~~--~~g~~~dl~~~~-~~~~v~~~~~~~d~~~al~~aDvV 114 (354)
+.....++|||+ |..+..-+..++. .+.+.+|.++|+++ +...+.++.+.. ....+... .+.++++++||+|
T Consensus 152 r~da~~l~iiG~-G~QA~~~l~a~~~v~~~i~~V~v~~r~~~~a~~f~~~~~~~~~~~~~v~~~---~s~~eav~~ADIV 227 (379)
T PRK06199 152 RKDSKVVGLLGP-GVMGKTILAAFMAVCPGIDTIKIKGRGQKSLDSFATWVAETYPQITNVEVV---DSIEEVVRGSDIV 227 (379)
T ss_pred cCCCCEEEEECC-cHHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCCceEEEe---CCHHHHHcCCCEE
Confidence 555679999999 9888887777665 33467999999987 344455555431 11134432 4678999999999
Q ss_pred EEcC
Q 018512 115 IIPA 118 (354)
Q Consensus 115 Ii~a 118 (354)
+.+.
T Consensus 228 vtaT 231 (379)
T PRK06199 228 TYCN 231 (379)
T ss_pred EEcc
Confidence 9754
No 488
>cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1.
Probab=94.92 E-value=0.23 Score=47.15 Aligned_cols=75 Identities=19% Similarity=0.226 Sum_probs=50.2
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc-h--------------------hHHHHHhcCCCCCeEEEEe
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-P--------------------GVTADISHMDTGAVVRGFL 99 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~-~--------------------g~~~dl~~~~~~~~v~~~~ 99 (354)
...||.|+|+ |.+|..+|..|+..|.. .|.|+|.+.. . .....|........+....
T Consensus 18 ~~s~VLIvG~-gGLG~EiaKnLalaGVg-~itI~D~d~ve~snL~rqf~~~~~dIGk~Kaea~~~~L~eLNp~V~V~~~~ 95 (286)
T cd01491 18 QKSNVLISGL-GGLGVEIAKNLILAGVK-SVTLHDTKPCSWSDLSSQFYLREEDIGKNRAEASQARLAELNPYVPVTVST 95 (286)
T ss_pred hcCcEEEEcC-CHHHHHHHHHHHHcCCC-eEEEEcCCccchhhcccCccCChHHhCHHHHHHHHHHHHHHCCCCEEEEEe
Confidence 3458999999 99999999999999974 8999998750 0 0111233332234444443
Q ss_pred CCCcHHhhhCCCcEEEEcC
Q 018512 100 GQPQLENALTGMDLVIIPA 118 (354)
Q Consensus 100 ~~~d~~~al~~aDvVIi~a 118 (354)
...+ ++-+.+.|+||.+.
T Consensus 96 ~~~~-~~~l~~fdvVV~~~ 113 (286)
T cd01491 96 GPLT-TDELLKFQVVVLTD 113 (286)
T ss_pred ccCC-HHHHhcCCEEEEec
Confidence 2223 46789999998873
No 489
>PLN03129 NADP-dependent malic enzyme; Provisional
Probab=94.91 E-value=0.23 Score=51.29 Aligned_cols=104 Identities=19% Similarity=0.240 Sum_probs=69.9
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHh-----CCC-----CcEEEEEecCC--chhHHHHHhcCC--CCCeEEEEeCCCcHHh
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKI-----NPL-----VSVLHLYDVVN--TPGVTADISHMD--TGAVVRGFLGQPQLEN 106 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~-----~~~-----~~ei~L~D~~~--~~g~~~dl~~~~--~~~~v~~~~~~~d~~~ 106 (354)
+..||++.|| |..|..++.+|+. .|+ ...++++|.+. ..+...+|.+.. +..... ...++.+
T Consensus 320 ~d~riv~~GA-GsAgigia~ll~~~~~~~~Gls~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~fa~~~~---~~~~L~e 395 (581)
T PLN03129 320 ADQRILFAGA-GEAGTGIAELIALAMSRQTGISEEEARKRIWLVDSKGLVTKSRKDSLQPFKKPFAHDHE---PGASLLE 395 (581)
T ss_pred hhceEEEECC-CHHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEcCCCeEeCCCCccChHHHHHHHhhcc---cCCCHHH
Confidence 3579999999 9999999988765 354 25899999875 111100011100 000011 1257899
Q ss_pred hhCC--CcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCC
Q 018512 107 ALTG--MDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV 162 (354)
Q Consensus 107 al~~--aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv 162 (354)
++++ +|++|=+.+.+.. +.+++++.|.+++++.+|+-.|||.
T Consensus 396 ~v~~vkptvLIG~S~~~g~--------------Ft~evi~~Ma~~~~rPIIFaLSNPt 439 (581)
T PLN03129 396 AVKAIKPTVLIGLSGVGGT--------------FTKEVLEAMASLNERPIIFALSNPT 439 (581)
T ss_pred HHhccCCCEEEEecCCCCC--------------CCHHHHHHHHhcCCCCEEEECCCCC
Confidence 9999 8998877554421 4457888898999999999999998
No 490
>PRK06436 glycerate dehydrogenase; Provisional
Probab=94.90 E-value=0.13 Score=49.24 Aligned_cols=95 Identities=20% Similarity=0.298 Sum_probs=60.5
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCC
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV 120 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~ 120 (354)
..++|.|+|- |.+|+.+|..+..-|. +|+.+|+.... .. .... ..++++.++.||+|++....
T Consensus 121 ~gktvgIiG~-G~IG~~vA~~l~afG~--~V~~~~r~~~~--------~~----~~~~--~~~l~ell~~aDiv~~~lp~ 183 (303)
T PRK06436 121 YNKSLGILGY-GGIGRRVALLAKAFGM--NIYAYTRSYVN--------DG----ISSI--YMEPEDIMKKSDFVLISLPL 183 (303)
T ss_pred CCCEEEEECc-CHHHHHHHHHHHHCCC--EEEEECCCCcc--------cC----cccc--cCCHHHHHhhCCEEEECCCC
Confidence 4579999999 9999999987765566 99999985311 01 0000 13578889999999997432
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec--CCCCCc
Q 018512 121 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS--NPVNST 165 (354)
Q Consensus 121 ~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t--NPv~~~ 165 (354)
.. +++ .++- .+.+....|.+++|+++ .++|.-
T Consensus 184 t~---~T~--------~li~--~~~l~~mk~ga~lIN~sRG~~vd~~ 217 (303)
T PRK06436 184 TD---ETR--------GMIN--SKMLSLFRKGLAIINVARADVVDKN 217 (303)
T ss_pred Cc---hhh--------cCcC--HHHHhcCCCCeEEEECCCccccCHH
Confidence 11 011 1110 22333335789999986 566654
No 491
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.88 E-value=0.84 Score=41.75 Aligned_cols=34 Identities=15% Similarity=0.160 Sum_probs=29.2
Q ss_pred CCeEEEEcCCC--chHHHHHHHHHhCCCCcEEEEEecC
Q 018512 42 GFKVAILGAAG--GIGQPLAMLMKINPLVSVLHLYDVV 77 (354)
Q Consensus 42 ~~kI~IiGa~G--~vG~~~a~~l~~~~~~~ei~L~D~~ 77 (354)
.++|.|+||+| .+|..++..|+..|. +|++++++
T Consensus 5 ~k~vlItGas~~~giG~~la~~l~~~G~--~vi~~~r~ 40 (256)
T PRK12748 5 KKIALVTGASRLNGIGAAVCRRLAAKGI--DIFFTYWS 40 (256)
T ss_pred CcEEEEeCCCCCCCHHHHHHHHHHHcCC--cEEEEcCC
Confidence 35799999974 699999999999887 88999876
No 492
>COG2344 AT-rich DNA-binding protein [General function prediction only]
Probab=94.87 E-value=0.17 Score=44.77 Aligned_cols=101 Identities=18% Similarity=0.279 Sum_probs=65.2
Q ss_pred CCCCCCeEEEEcCCCchHHHHHH-HHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhC--CCcEE
Q 018512 38 GGAAGFKVAILGAAGGIGQPLAM-LMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT--GMDLV 114 (354)
Q Consensus 38 ~~~~~~kI~IiGa~G~vG~~~a~-~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~--~aDvV 114 (354)
+..+..+|.|||+ |++|.+++. .+..+.-..-+..+|+++. . .........++.. ++++.-++ +.|+.
T Consensus 80 g~~~~tnviiVG~-GnlG~All~Y~f~~~~~~~iv~~FDv~~~--~---VG~~~~~v~V~~~---d~le~~v~~~dv~ia 150 (211)
T COG2344 80 GQDKTTNVIIVGV-GNLGRALLNYNFSKKNGMKIVAAFDVDPD--K---VGTKIGDVPVYDL---DDLEKFVKKNDVEIA 150 (211)
T ss_pred CCCcceeEEEEcc-ChHHHHHhcCcchhhcCceEEEEecCCHH--H---hCcccCCeeeech---HHHHHHHHhcCccEE
Confidence 4566789999999 999999986 4444444556788999862 1 1111111223322 35555555 88999
Q ss_pred EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCc
Q 018512 115 IIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNST 165 (354)
Q Consensus 115 Ii~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~ 165 (354)
|+|. | ....+++++.+-+.+-+++ +++| |+.+.
T Consensus 151 iLtV--P--------------a~~AQ~vad~Lv~aGVkGI-lNFt-Pv~l~ 183 (211)
T COG2344 151 ILTV--P--------------AEHAQEVADRLVKAGVKGI-LNFT-PVRLQ 183 (211)
T ss_pred EEEc--c--------------HHHHHHHHHHHHHcCCceE-Eecc-ceEec
Confidence 9984 2 2355688888888888883 5666 66655
No 493
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=94.86 E-value=0.21 Score=48.93 Aligned_cols=35 Identities=29% Similarity=0.468 Sum_probs=31.1
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 78 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~ 78 (354)
..||+|+|+ |.+|+.++..|+..|.. ++.++|.+.
T Consensus 28 ~~~VlivG~-GGlGs~~a~~La~~Gvg-~i~lvD~D~ 62 (355)
T PRK05597 28 DAKVAVIGA-GGLGSPALLYLAGAGVG-HITIIDDDT 62 (355)
T ss_pred CCeEEEECC-CHHHHHHHHHHHHcCCC-eEEEEeCCE
Confidence 348999999 99999999999998874 899999875
No 494
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.85 E-value=0.098 Score=49.59 Aligned_cols=58 Identities=19% Similarity=0.381 Sum_probs=44.4
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512 39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 118 (354)
Q Consensus 39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a 118 (354)
.-+..+|+|+|++|.+|..++..|+..+. +|.+++.. +.++.+.+++||+||.+.
T Consensus 156 ~l~Gk~vvViG~gg~vGkpia~~L~~~ga--tVtv~~~~-----------------------t~~L~~~~~~aDIvI~At 210 (283)
T PRK14192 156 ELAGKHAVVVGRSAILGKPMAMMLLNANA--TVTICHSR-----------------------TQNLPELVKQADIIVGAV 210 (283)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHhCCC--EEEEEeCC-----------------------chhHHHHhccCCEEEEcc
Confidence 34556999999944599999999988876 88888752 124556679999999988
Q ss_pred CCC
Q 018512 119 GVP 121 (354)
Q Consensus 119 g~~ 121 (354)
|.|
T Consensus 211 G~~ 213 (283)
T PRK14192 211 GKP 213 (283)
T ss_pred CCC
Confidence 644
No 495
>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]
Probab=94.82 E-value=0.22 Score=46.38 Aligned_cols=75 Identities=19% Similarity=0.189 Sum_probs=45.3
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEc
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP 117 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ 117 (354)
+|||+|.||+|.+|+.++..+.+.+...=+..+|.......-.|.........+... .+.|+.....++|++|=.
T Consensus 2 ~iki~V~Ga~GRMG~~ii~~v~~~~~~~L~aa~~~~~~~~~g~d~ge~~g~~~~gv~-v~~~~~~~~~~~DV~IDF 76 (266)
T COG0289 2 MIKVAVAGASGRMGRTLIRAVLEAPDLELVAAFDRPGSLSLGSDAGELAGLGLLGVP-VTDDLLLVKADADVLIDF 76 (266)
T ss_pred CceEEEEcCCChHHHHHHHHHhcCCCceEEEEEecCCccccccchhhhccccccCce-eecchhhcccCCCEEEEC
Confidence 689999999999999999999887744345667776411111122222111111111 123455677899988864
No 496
>PRK11889 flhF flagellar biosynthesis regulator FlhF; Provisional
Probab=94.82 E-value=0.74 Score=45.76 Aligned_cols=135 Identities=16% Similarity=0.220 Sum_probs=70.0
Q ss_pred CCCeEEEEcCCCchHHHHHH-----HHHhCCCCcEEEEEecCC-chhHHHHHhcCC--CCCeEEEEeCCCcHHhhh---C
Q 018512 41 AGFKVAILGAAGGIGQPLAM-----LMKINPLVSVLHLYDVVN-TPGVTADISHMD--TGAVVRGFLGQPQLENAL---T 109 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~-----~l~~~~~~~ei~L~D~~~-~~g~~~dl~~~~--~~~~v~~~~~~~d~~~al---~ 109 (354)
++.+|+++|- +-+|-+... .+...+. .+.++|.|. ..+-...|.... ....+.......++.+++ +
T Consensus 240 ~~~vI~LVGp-tGvGKTTTiaKLA~~L~~~Gk--kVglI~aDt~RiaAvEQLk~yae~lgipv~v~~d~~~L~~aL~~lk 316 (436)
T PRK11889 240 EVQTIALIGP-TGVGKTTTLAKMAWQFHGKKK--TVGFITTDHSRIGTVQQLQDYVKTIGFEVIAVRDEAAMTRALTYFK 316 (436)
T ss_pred CCcEEEEECC-CCCcHHHHHHHHHHHHHHcCC--cEEEEecCCcchHHHHHHHHHhhhcCCcEEecCCHHHHHHHHHHHH
Confidence 3568999998 667766532 2333444 788899886 323333333211 112222211223344444 2
Q ss_pred ---CCcEEEE-cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEE
Q 018512 110 ---GMDLVII-PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLL 185 (354)
Q Consensus 110 ---~aDvVIi-~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kvi 185 (354)
+.|+||+ ++|... .+...+.++.+.++...|+..+++++-....- -+.+++..+..++...+|
T Consensus 317 ~~~~~DvVLIDTaGRs~-----------kd~~lm~EL~~~lk~~~PdevlLVLsATtk~~--d~~~i~~~F~~~~idglI 383 (436)
T PRK11889 317 EEARVDYILIDTAGKNY-----------RASETVEEMIETMGQVEPDYICLTLSASMKSK--DMIEIITNFKDIHIDGIV 383 (436)
T ss_pred hccCCCEEEEeCccccC-----------cCHHHHHHHHHHHhhcCCCeEEEEECCccChH--HHHHHHHHhcCCCCCEEE
Confidence 5799999 665432 23345666666666667887766654211111 111334444445544444
Q ss_pred EeccchH
Q 018512 186 GVTMLDV 192 (354)
Q Consensus 186 G~t~ld~ 192 (354)
+|.+|+
T Consensus 384 -~TKLDE 389 (436)
T PRK11889 384 -FTKFDE 389 (436)
T ss_pred -EEcccC
Confidence 466665
No 497
>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional
Probab=94.80 E-value=0.065 Score=52.18 Aligned_cols=72 Identities=24% Similarity=0.472 Sum_probs=46.6
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCC-C-CcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINP-L-VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 118 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~-~-~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a 118 (354)
+.+||+|+||+|.+|..+...|...+ . ..+|.++......|....+.. ..+... ..+ .+.++++|+||+++
T Consensus 4 ~~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~saGk~~~~~~----~~l~v~--~~~-~~~~~~~Divf~a~ 76 (347)
T PRK06728 4 KGYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSKRSAGKTVQFKG----REIIIQ--EAK-INSFEGVDIAFFSA 76 (347)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECcccCCCCeeeCC----cceEEE--eCC-HHHhcCCCEEEECC
Confidence 34799999999999999999998544 3 345888876543333222211 123322 123 35678999999976
Q ss_pred C
Q 018512 119 G 119 (354)
Q Consensus 119 g 119 (354)
+
T Consensus 77 ~ 77 (347)
T PRK06728 77 G 77 (347)
T ss_pred C
Confidence 4
No 498
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=94.79 E-value=0.18 Score=40.12 Aligned_cols=63 Identities=19% Similarity=0.182 Sum_probs=43.4
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 118 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a 118 (354)
+..+|.|||+ |.+|..-+..|+..|. +|.++.... ..... ...+.. ..+++.+.++|+||.+.
T Consensus 6 ~~~~vlVvGg-G~va~~k~~~Ll~~gA--~v~vis~~~-----~~~~~---~i~~~~----~~~~~~l~~~~lV~~at 68 (103)
T PF13241_consen 6 KGKRVLVVGG-GPVAARKARLLLEAGA--KVTVISPEI-----EFSEG---LIQLIR----REFEEDLDGADLVFAAT 68 (103)
T ss_dssp TT-EEEEEEE-SHHHHHHHHHHCCCTB--EEEEEESSE-----HHHHT---SCEEEE----SS-GGGCTTESEEEE-S
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC--EEEEECCch-----hhhhh---HHHHHh----hhHHHHHhhheEEEecC
Confidence 3459999999 9999999999998886 999999863 11111 112221 23457799999999874
No 499
>PLN00203 glutamyl-tRNA reductase
Probab=94.77 E-value=0.25 Score=50.84 Aligned_cols=120 Identities=13% Similarity=0.145 Sum_probs=71.1
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchh--HHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512 41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 118 (354)
Q Consensus 41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g--~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a 118 (354)
...+|+|||+ |.+|..++..|...|. .+|++++++.... ....+. . ..+... ...++.+++.++|+||.+.
T Consensus 265 ~~kkVlVIGA-G~mG~~~a~~L~~~G~-~~V~V~nRs~era~~La~~~~--g--~~i~~~-~~~dl~~al~~aDVVIsAT 337 (519)
T PLN00203 265 ASARVLVIGA-GKMGKLLVKHLVSKGC-TKMVVVNRSEERVAALREEFP--D--VEIIYK-PLDEMLACAAEADVVFTST 337 (519)
T ss_pred CCCEEEEEeC-HHHHHHHHHHHHhCCC-CeEEEEeCCHHHHHHHHHHhC--C--CceEee-cHhhHHHHHhcCCEEEEcc
Confidence 3569999999 9999999999888774 4799999875222 222221 1 112221 1235678899999999875
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhh----CCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEec
Q 018512 119 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKC----CPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT 188 (354)
Q Consensus 119 g~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~----~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~t 188 (354)
+.+.. = +..+.++.+.+. ...-++|=.+.|=|+-.. ...+|.-.++-+-
T Consensus 338 ~s~~p-v------------I~~e~l~~~~~~~~~~~~~~~~IDLAvPRdIdp~--------v~~l~~v~lydiD 390 (519)
T PLN00203 338 SSETP-L------------FLKEHVEALPPASDTVGGKRLFVDISVPRNVGAC--------VSELESARVYNVD 390 (519)
T ss_pred CCCCC-e------------eCHHHHHHhhhcccccCCCeEEEEeCCCCCCccc--------cccCCCCeEEEec
Confidence 43321 0 122333333211 112366778999877632 2245655666664
No 500
>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=94.73 E-value=0.073 Score=51.35 Aligned_cols=73 Identities=26% Similarity=0.220 Sum_probs=46.5
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCC--CCeEEEEeCCCcHHh-hhCCCcEEEEc
Q 018512 42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT--GAVVRGFLGQPQLEN-ALTGMDLVIIP 117 (354)
Q Consensus 42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~--~~~v~~~~~~~d~~~-al~~aDvVIi~ 117 (354)
++||+|+||+|+.|..+..+|...+.. |+.++...+..|....-.+... ...++.. ..|.++ ...+||+||.+
T Consensus 2 ~~kV~IvGasGYtG~EL~rlL~~Hp~v-e~~~~ss~~~~g~~~~~~~p~l~g~~~l~~~--~~~~~~~~~~~~DvvFla 77 (349)
T COG0002 2 MIKVGIVGASGYTGLELLRLLAGHPDV-ELILISSRERAGKPVSDVHPNLRGLVDLPFQ--TIDPEKIELDECDVVFLA 77 (349)
T ss_pred CceEEEEcCCCCcHHHHHHHHhcCCCe-EEEEeechhhcCCchHHhCcccccccccccc--cCChhhhhcccCCEEEEe
Confidence 579999999999999999999888754 6888887653343332222211 1223321 112222 35669999997
Done!